gebhart/patrepeval huggingface dataset:
Genetic approach to microbial coal desulfurization: Final report, January 1--December 31, 1988 (1989)

Naturally occurring sulfur bacteria such as Thiobacillus and Sulfolobus have been shown to remove inorganic sulfur form coal. If genetically modified bacteria could be developed to attack the organic sulfur (which is not removed by natural sulfur bacteria) then it should be possible to devise a microbial process for coal desulfurization. Such a biological approach should be relatively cheap and safe and produce harmless waste products. We have developed a multiple mutant of Escherichia coli which can oxidize thiophene derivatives and are continuing to improve this strain. We have cloned DNA fragments from the chromosome of the triple mutant NAR30 thdA thdC thD. One plasmid pKA 15 carries what is presumably the thdA gene. Another plasmid, pKA 10, carries two genes designated thdF and thdG which, when present on a plasmid in multiple copies, confer the ability to oxidize thiophenes and furans. We think it probable that thdA is a regulator gene and that thdF and thdG are two of the structural genes which it regulates. Recently we have subcloned fragments of a large plasmid present in a natural isolate which degrades dibenzo-thiophene sulfone. No single fragment alone confers on an E. coli host the ability to degrade any aromatic substrate; however, certain mixtures of two or three fragments confer the ability to degrade benzoate. We have also mapped and partly characterized mutant affecting the enzyme thiosulfate: sulfur transferase (''rhodanese'') which removes (or inserts) sulfur from (or into) a variety of organic molecules. 26 refs., 6 figs., 6 tabs.
On the nature of serological tissue polypeptide antigen (TPA); monoclonal keratin 8, 18, and 19 antibodies react differently with TPA prepared from human cultured carcinoma cells and TPA in human serum. (1990)

A panel of monoclonal antibodies which recognize the rod domains of human keratin 8, 18, or 19 was tested for its capacity to replace TPA antiserum as anchoring antibody in a two-site TPA immuno-radiometric assay kit. All six antibodies could anchor a TPA preparation, with varying efficiencies, when iodinated TPA antiserum monitored antigen binding. Conversely, the soluble keratin 8, 18, and 19 rod complex could efficiently replace the TPA preparation as antigen when TPA antiserum anchored and detected antigen binding. Moreover, in immunoblots the TPA antiserum recognized the rod domains of human keratins 8, 18, and 19. In contrast to the general reaction of the keratin antibodies with a TPA preparation, the reactions with TPA in human serum were antibody and sample dependent. A keratin 19- and a keratin 8-specific antibody anchored TPA in all sera consistently and efficiently, while the other 4 antibodies anchored serological TPA inefficiently. TPA in human serum was found in immunoblots to be somewhat more heterogeneous in size than the standard TPA preparation. The data presented here indicate that TPA in patients' sera is a degradation product of keratins 8, 18, and 19. The significance of these findings is discussed.
An exploration of the impact of electronic conveyancing (eConveyancing) upon management of risk in conveyancing transactions (2012)

This research examined the management of risk in conveyancing transactions in the context of the move from paper based to electronic conveyancing (eConveyancing). Legal, descriptive, analytical and comparative techniques were deployed in order to determine the likely impact of technological change on the distribution of legal risk with particular reference to Ontario and Ireland. The impact is the extent to which a change in transactional process may unintentionally affect risk. Risk being the consequence of change and the likelihood of that consequence having a negative effect. The particular focus was on risks that impact on title registration and the security, protection or lack thereof that this registration offers to land owners, third parties and property claimants. The method deployed was to use a model or abstracted process to perform a transaction analysis based on abstract participants and their standpoint in the process. The methodology was based upon doctrinal legal scholarship in the comparative law tradition. Both the method and methodology demanded that a neutral vocabulary be generated and this formed the foundation for the schematic.
Avalanche buildup time of silicon avalanche photodiodes (1975)

The avalanche buildup time in silicon n+-p avalanche photodiodes is studied by a shot noise investigation. The avalanche buildup time t is given by t∼5×10−13M sec, where M is the multiplication factor.
CFD Analysis on Two-phase Flow Behavior of Liquid Water in Cathode Channel of PEM Fuel Cell (2007)

Liquid water in flow channel is an important factor that limits the steady and transient performance of PEM fuel cells. A computational fluid dynamics study based on the volume-of-fluid [VOF] multi-phase model was conducted to understand the two-phase flow behavior of liquid water in cathode gas channels. The liquid water transport in bends was investigated, where the effects of surface characteristics (hydrophilic and hydrophobic surfaces], channel geometries (rectangular and chamfered corners], and air velocity in channel were discussed. The two-phase flow behavior of liquid water with hydrophilic channel surface and that with hydrophobic surface was found very different; liquid water preferentially flows along the corners of flow channel in hydrophilic channels while it flows in rather spherical shape in hydrophobic channels. The results showed that liquid water transport was generally enhanced when hydrophobic channel with rounded corners was used. However, the surface characteristics and channel geometries became less important when air velocity was increased over 10m/s. This study is believed to provide a useful guideline for design optimization of flow patterns or channel configurations of PEM fuel cells.
Allergen-Specific Immunotherapy (2014)

Specific immunotherapy was introduced for the treatment of grass pollen-induced hay fever in 1911. The treatment was soon extended to other pollens as well as perennial allergens, and to the treatment of bronchial asthma. Definitive studies of its efficacy for both rhinitis and asthma came only many decades later. Understanding gradually emerged of the underlying immunologic mechanisms that include the generation of regulatory T lymphocytes, immune deviation from allergen-specific Th2 to Th1 responses, and a shift in allergen-specific antibody production from immunoglobulin (Ig) E to IgG4. Along with understanding of the immune basis came an appreciation that immunotherapy modifies allergic disease expression, producing protection against disease progression and symptomatic improvement that persists for years after the treatment is discontinued. Recent new directions for immunotherapy include sublingual administration of inhalant allergens and use of the oral route to treat food allergy.
A New Era for the Non-Rulers Too: West European Communist Parties, <i>Perestroika</i> and the Revolution in Eastern Europe (1991)

The revolutions in central and eastern Europe have naturally focused attention on the collapse of the ruling parties of these regimes and the regimes themselves. This has tended to overlook the impact of this collapse on the non-ruling communist parties of western Europe. This article attempts to fill this gap by providing an analysis of what has happened to west European communism and the family of west European communist parties (WECPs) as a consequence of the collapse of the ruling communist regimes in central and eastern Europe.
The Reactions of Diketene with Ketones<sup>1</sup> (1953)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTThe Reactions of Diketene with Ketones1Michael F. Carroll and Alfred R. BaderCite this: J. Am. Chem. Soc. 1953, 75, 21, 5400–5402Publication Date (Print):November 1, 1953Publication History Published online1 May 2002Published inissue 1 November 1953https://pubs.acs.org/doi/10.1021/ja01117a076https://doi.org/10.1021/ja01117a076research-articleACS PublicationsRequest reuse permissionsArticle Views1194Altmetric-Citations45LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts
Slantlet Transform for Multispectral Image Fusion (2009)

Problem statement: Image fusion is a process by which multispectral and panchromatic images, or some of their features, are combined together to form a high spatial/high spectral resolutions image. The successful fusion of images acquired from different modalities or instruments is a great importance issue in remote sensing applications. Approach: A new method of image fusion was introduced. It was based on a hybrid transform, which is an extension of Ridgelet transform. It used the slantlet transform instead of wavelet transform in the final steps of Ridgelet transform. The slantlet transform was an orthogonal discrete wavelet transform with two zero moments and with improved time localization. Results: Since edges and noise played fundamental role in image understanding, this hybrid transform was proved to be good way to enhance the edges and reduce the noise. Conclusion: The proposed method of fusion presented richer information in spatial and spectral domains simultaneously as well as it had reached an optimum fusion result.
Mood and Anxiety Disorders in Chronic Fatigue Syndrome, Fibromyalgia, and Irritable Bowel Syndrome (2015)

Mood and anxiety disorders are more prevalent in individuals with FSSs, and particularly CFS, than in individuals without FSSs. However, most individuals with FSSs do not have mood or anxiety disorders.
Using an Experimental Bicycle Seat to Reduce Perineal Numbness (2002)

Researchers evaluated the effectiveness of an experimental seat that was designed to prevent perineal numbness and possibly erectile dysfunction in male bicyclists. A trial of the device among 15 experienced cyclists measured perineal sensation after a 1-hour stationary cycling session on a standard seat followed several days later by the same exercise protocol on the experimental bike seat. Cyclists reported more numbness with the standard seat than with the experimental seat (79% vs 14%). Sensory testing found greater hypoesthesia with the standard seat. Innovations in bicycle seat design may decrease or eliminate perineal numbness.
Site-Directed Mutagenesis of a Human Brain Ecto-Apyrase:  Evidence That the E-Type ATPases Are Related to the Actin/Heat Shock 70/Sugar Kinase Superfamily (1998)

On the basis of sequence homologies observed between members of the E-type ATPases and the phosphate binding motifs of the actin/heat shock protein 70/sugar kinase superfamily, a human ecto-apyrase was analyzed by site-directed mutagenesis of conserved amino acids in apyrase conserved regions (ACR) I and IV. The expressed proteins were analyzed to assess the significance of these amino acids. A conserved aspartic acid residue in ACR IV was mutated to alanine, asparagine, and glutamic acid, and the relative activity and Km for ATP and ADP were determined. Mutation of this Asp 219 to Ala or Asn yielded an enzyme severely reduced in ATP hydrolyzing activity (>90%) and completely devoid of ADPase activity, along with a similar extent of inhibition of hydrolysis of other nucleoside di- and triphosphates. Interestingly, mutation of Asp 219 to Glu completely restored the ability of the enzyme to hydrolyze nucleoside triphosphates at levels above that of the wild-type enzyme, while the ability to hydrolyze nucleoside diphosphates was slightly reduced. Mutation of a second conserved aspartic acid in ACR I (Asp 62) and two invariant glycine residues in both ACR I (Gly 64) and ACR IV (Gly 221) also severely disrupted nucleotidase activity. These results demonstrate that the E-type ATPases contain the nucleoside phosphate binding domains present in the actin/heat shock protein/sugar kinase superfamily. Together with analysis of computer-predicted secondary structures, the results suggest that the ecto-ATPases and ecto-apyrases are part of, or closely related to, the actin superfamily of proteins.
Teaching interdisciplinary computational science from an electronic book on the Internet (2002)

The authors argue that by offering a general introduction and overview to networks, computer architectures, scientific visualization, programming languages, a variety of operating systems and hypertext authoring tools, computer science students get a broad comprehensive view of modern high performance computing methodologies. They describe the Computational Science Education Project which was initiated in September 1991, by the US Department of Energy to develop a syllabus for teaching interdisciplinary computational science. The interdisciplinary nature of the project is intended to contribute to national technological competitiveness by producing a body of graduates with the necessary skills to operate effectively in high-performance computing environments.
Species variations in phospholipid class distribution of organs: II. Heart and skeletal muscle (1969)

Abstract Total lipid, lipid phosphorus and phospholipid class distribution were determined for heart and skeletal muscles from five vertebrates (human, bovine, rat, mouse and frog) and skeletal muscles from four invertebrates (lobster, abalone, scallop and sea urchin). The precision of the analytical method [separation by two‐dimensional thin layer chromatography (TLC) and phosphorus analysis of spots] was demonstrated by small values for standard deviations. Accuracy of spot identification and analytical values was insured by comparison with results obtained by TLC of triethylaminoethyl cellulose column chromatographic fractions. Values for total lipid, total phospholipid and phospholipid class distribution of heart and skeletal muscles from the five vertebrate species showed essentially the same variability observed for the same organ from different animals of one species (rat). The data indicate that, among vertebrates there is little or no variability for phospholipid class distribution in muscle membranes in agreement with data for other organs and subcellular particulates presented in other reports. Invertebrate skeletal muscles were found to differ qualitatively and/or quantitatively from those of vertebrates. In one species (sea urchin), ceramide phosphorylethanolamine was the only sphingolipid, sphingomyelin characteristic of vertebrates being absent. In two species (abalone and scallop) ceramide aminoethylphosphonate was present and sphingomyelin was absent. In one (lobster), sphingomyelin was the only sphingolipid. Quantitatively, higher levels of sphingolipid and phosphatidyl serine and lower levels of phosphatidyl inositol were found in invertebrate skeletal muscle. The significance of the data is discussed in relation to subcellular particulate lipid class composition.
Cardiac troponin T composition in normal and regenerating human skeletal muscle (1997)

Cardiac troponin T (cTnT), measurement of which has been recommended for diagnosing myocardial infarction, was initially believed to be specific for the heart. However, recent publications have reported cTnT in sera of patients without cardiac disease; therefore, we investigated whether cTnT could be found in human skeletal muscle tissues. Using immunohistochemistry, Western blot, and quantitative cTnT ELISA, we assayed human heart (n = 3), normal human skeletal muscle (n = 6), and diseased skeletal muscle samples from patients with polymyositis (PM, n = 13) and Duchenne muscular dystrophy (DMD, n = 6). All heart specimens contained cTnT, but the expression of cTnT in normal skeletal muscle samples varied widely, ranging from no expression (quadriceps femoris) to expression by up to 20% of the muscle fibers (diaphragm). Immunohistochemistry detected cTnT in skeletal muscle of 8 of the PM patients and all of the DMD patients. Mean myofibrillar cTnT concentrations (mg/g myofibrillar protein) were: cardiac = 10.0, normal skeletal = 0.8, PM skeletal = 0.7, and DMD skeletal = 4.37, confirming the results of immunohistochemistry. Western blot analysis also confirmed the expression of cTnT in muscle from DMD patients. These findings provide evidence that cTnT is not 100% cardiac-specific but also is expressed in regenerating (PM and DMD) as well as in normal (nonregenerating) skeletal muscle.
Socioeconomic resources in medicine: review of the literature. (1984)

In this era of intense competition in medicine, it is essential for health sciences librarians to keep abreast of the new and varied socioeconomic influences in the medical environment. A list of socioeconomic resources is provided to help meet this objective. A citation analysis of the Socioeconomic Bibliographic Information (SIB) database was used as a selection criterion. An annotated list of ninety journals, newspapers, and newsletters is included, which provides title of publication, publisher, cost, index information, and special characteristics. In addition, publishers and associations that provide socioeconomic information are listed, and an annotated list of standard statistical resource books is given.
Current and future therapeutic approaches in idiopathic pulmonary fibrosis (2005)

Idiopathic pulmonary fibrosis (IPF) is a lethal form of idiopathic diffuse lung disorders for which no current treatment is effective. The aim of the present study was to systematically review the current status and novel therapies of IPF, with emphasis on controlled trials. The studies selected included randomised controlled trials using drugs alone and/or in combination for the treatment of adults with IPF and meta-analyses, published in English. Abstracts of identified articles were retrieved and articles possibly fulfilling inclusion criteria were retrieved in full. Two reviewers independently assessed trial quality if there were any included studies. Data quality was based on place of publication and relevance to clinical care. There is a lack of good-quality studies regarding the effectiveness of the most used drugs, including corticosteroids and noncorticosteroid immunosuppressive agents. Oral corticosteroids are the usual treatment. Other therapies either alone or in combination with corticosteroids are widely used, including azathioprine, cyclophosphamide and colchicine. Interestingly, clinical trials with novel drugs, mainly antifibrotic, anticytokine and immunoregulatory, are currently being investigated in various trial phases. In conclusion, at present, there are no evidence-based therapies for idiopathic pulmonary fibrosis. Further controlled studies are warranted to improve the evidence base for clinical practice.
A novel approach to immunomodulation of frozen human bone marrow with interleukin-2 for clinical application. (1993)

Interleukin-2 (IL-2) activation of fresh or frozen bone marrow (BM) in vitro generates killer cells with potent anti-tumor effect both in vitro and in vivo. The IL-2-activated BM (ABM) retains the capacity to reconstitute the hematopoietic system in an autologous bone marrow transplantation (ABMT) setting. The killer cells lose their cytotoxicity if the ABM undergoes the procedures of freezing and thawing. Therefore, for clinical application, the ABM has to be generated after thawing a frozen stock of BM before ABMT. The thawed BM cells are fragile and may undergo lysis, resulting in clump formation and cell loss. The frozen autograft also contains components of cryoprotectant mixture whose effects on the generation of ABM have not been defined. The present studies have been carried out to optimize a technique of handling the frozen BM for immunomodulation with IL-2 for 24 h at 37 degrees C prior to ABMT, with minimal loss of cells. IL-2-activation of BM was carried out in bags containing serum free medium which were designed to permit gaseous exchange. Addition of deoxyribonuclease (DNAse) (100 micrograms/ml of BM concentrate) immediately after thawing and the presence of heparin (20 units/ml) in the medium completely abrogated immediate or delayed clumping of cells. The presence of DNAse and/or heparin during in vitro culture did not affect the cell viability, cytotoxicity against tumor cells or the progenitor cell activity of the ABM; all these functions were well maintained even when BM was placed in culture immediately after thawing (without washing). There was no microbial contamination.(ABSTRACT TRUNCATED AT 250 WORDS)
A Review of Geometric Transformations for Nonrigid Body Registration (2008)

This paper provides a comprehensive and quantitative review of spatial transformations models for nonrigid image registration. It explains the theoretical foundation of the models and classifies them according to this basis. This results in two categories, physically based models described by partial differential equations of continuum mechanics (e.g., linear elasticity and fluid flow) and basis function expansions derived from interpolation and approximation theory (e.g., radial basis functions, B-splines and wavelets). Recent work on constraining the transformation so that it preserves the topology or is diffeomorphic is also described. The final section reviews some recent evaluation studies. The paper concludes by explaining under what conditions a particular transformation model is appropriate.
Multiphase Modeling on the Convective Transport of an Organic Solvent through Unsaturated Soils (2004)

In-situ photolysis is one of the most promising ways to clean up a soil contaminated with 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD). This study focuses on the mathematical description and model development of the convective upward transport of an organic solvent driven by evaporation and photodecomposition at the surface as the major transport mechanism in the clean up process. A finite-element-based numerical model was proposed to incorporate effects of multiphase flow on the distribution of each fluid, gravity as a driving force, and the use of van Genutchen equation for more accurate description of k-S-p relations. This paper presents results of extensive numerical calculations conducted to investigate the various parameters that play a role in the solvent migration through a laboratory-scale unsaturated soil column. The numerical results indicate that gravity affects significantly on the fluids distribution and evaporation for highly permeable soils. The soil texture has a profound influence on the fluid saturation profile during evaporation process. The amount of solvent convective motion increases with increasing evaporation rates and decreasing initial water saturation. Simulations conducted in this study have shown that the developed model is very useful in analyzing the effects of various parameters on the convective migration of an organic solvent in the soil environments.