gebhart/patrepeval huggingface dataset:
Occurrence of sulfate in the asparagine-linked complex carbohydrate units of thyroglobulin. Identification and localization of galactose 3-sulfate and N-acetylglucosamine 6-sulfate residues in the human and calf proteins. (1988)

Human thyroglobulin glycopeptides representing the multiple asparagine-linked complex (unit B) carbohydrate units of this protein were found to contain substantial amounts of sulfate (ranging from 0.5 to 2.5 mol/mol of oligosaccharide); this substituent was shown to occur primarily in the form of terminal beta-linked Gal-3-SO4 residues which represent novel capping groups occurring alternatively to sialic acid and in comparable amounts. Upon hydrazine/nitrous acid fragmentation and radiolabeling with NaB3H4, all human unit B DEAE-resolved glycopeptide fractions yielded an acidic disaccharide which was characterized as Gal-3-SO4 beta 1----4-anhydromannitol. Studies on glycopeptides modified by desialylation, desulfation, and beta-galactosidase treatment indicated that the majority (approximately 70%) of the complex carbohydrate units contain sulfate groups and that Gal-3-SO4 and sialic acid residues can coexist in terminal positions on the same N-linked oligosaccharide. In addition to Gal-3-SO4, the most acidic unit B variants were found to contain GlcNAc-6-SO4 which was recovered as Gal beta 1----4-anhydromannitol-6-SO4 after hydrazine/nitrous acid treatment and NaB3H4 reduction. On the basis of chromatography on immobilized concanavalin A, it was determined that whereas the Gal-3-SO4 groups occur on biantennary as well as more highly branched carbohydrate units, GlcNAc-6-SO4 is exclusively present in the latter oligosaccharides. In contrast to the N-linked carbohydrate units, the previously described O-linked glycosaminoglycan chain of human thyroglobulin yielded GlcA beta 1----3-anhydrotalitol-6-SO4 upon hydrazine/nitrous acid/NaB3H4 treatment, indicating that it is a chrondroitin 6-sulfate-like polymer. The distribution of sulfate in the complex oligosaccharides of calf thyroglobulin was quite different from that in the human protein; sulfate was not detectable in most of the glycopeptides and was sequestered in a single multibranched complex-type glycopeptide fraction (1.6 mol of sulfate/mol of oligosaccharide) which contained about equal amounts of Gal-3-SO4 and GlcNAc-6-SO4. The difference in galactose sulfation between human and calf thyroglobulins may be related to the substitution in the latter protein of some of the galactose residues by alpha-D-Gal capping groups.
Identification of Francisella tularensis Lipoproteins That Stimulate the Toll-like Receptor (TLR) 2/TLR1 Heterodimer (2007)

The innate immune response to Francisella tularensis is primarily mediated by TLR2, though the bacterial products that stimulate this receptor remain unknown. Here we report the identification of two Francisella lipoproteins, TUL4 and FTT1103, which activate TLR2. We demonstrate that TUL4 and FTT1103 stimulate chemokine production in human and mouse cells in a TLR2-dependent way. Using an assay that relies on chimeric TLR proteins, we show that TUL4 and FTT1103 stimulate exclusively the TLR2/TLR1 heterodimer. Our results also show that yet unidentified Francisella proteins, possibly unlipi-dated, have the ability to stimulate the TLR2/TLR6 heterodimer. Through domain-exchange analysis, we determined that an extended region that comprises LRR 9-17 in the extra-cellular portion of TLR1 mediates response to Francisella lipoproteins and triacylated lipopeptide. Substitution of the corresponding LRR of TLR6 with the LRR derived from TLR1 enables TLR6 to recognize TUL4, FTT1103, and triacylated lipopeptide. This study identifies for the first time specific Fran-cisella products capable of stimulating a proinflammatory response and the cellular receptors they trigger.
Technical Monitoring of Microspheres from Fly Ashes of Electric Power Stations in the Russian Federation (2005)

A progressive tendency in raw material-intensive industries is transformation of industrial waste into the raw material feasible for industrial application. This also refers in full measure to fly ash microspheres that are essentially an industrial by-product of electric power stations. In the period from 1996 through 2002 specialists from the RFNC-VNIIEF carried out technical monitoring of fly ash microspheres at the electric power stations of the Russian Federation, which use power-generating coals of the basic fields. The main objective of this monitoring was to study microsphere formation processes, to determine microsphere resources at ash dumps of electric power stations and to examine the principal consumer characteristics of microspheres. Based on the technical operation parameters of electric power stations, those of them that may potentially be sources of microspheres were specified and their ash dumps were examined. The microsphere samples were selected at the electric power stations promising in commercial terms and their main properties were investigated. As a result of these studies a lot of materials have been collected. They have the form of a computer program “Ash microspheres of the Russian Federation. Database”. The derived information analysis and the experience of industrial countries suggest that the Russian Federation has real opportunities for commercial utilization of microspheres from fly ashes of electric power stations. Submitted for consideration in the 2005 World of Coal Ash, April 11-15, 2005, Lexington, Kentucky, USA.
A comparison of the x-ray sensitivity of haploid and diploid zygotes of Xenopus laevis. (1967)

Haploids were produced by UV irradiation of fertilized eggs 10 minutes after laying, when the female pronucleus can be inactivated. Some diploids were irradiated with UV light 30 minutes after laying, when the female nucleus cannot be inactivated. These two types and control diploids were X-irradiated with a variety of doses 40 minutes after laying, when the pronuclei fuse. No embryos died before gastrulation (twelve cell divisions). This supports other evidence that early development can be independent of the nucleus, owing to the presence of food reserves. The embryos start dying in the period of new RNA synthesis. Survival was scored at stage 28 (late tail bud). Dose-survival curves revealed that there was no difference in survival of diploids whether preirradiated with UV or not. At all survival levels it was necessary to give diploids twice the dose of haploids in order to produce the same effect. Haploid LD50 was 1275 rads and diploid LD50 was 2550 rads within a total range of doses given, of 239 to...
Unusual Bacteriophages in <i>Salmonella newport</i> (1974)

Six phages were isolated from sewage and from a lysogenic strain. Three of them, belonging to a new morphological group, had contractile tails and elongated heads with axial ratios of 2.4:1. Two phages, possessing short tails and very long heads with axial ratios of 3.5:1, were new isolates of an extremely rare group. Phages of both groups formed polyheads of various sizes and shapes. The last phage, 61 nm in diameter, seemed to have a tail-like appendage. All phages had double-stranded DNA, were active on enterobacteria only, and differed in their host range. The first five phages seemed to be Salmonella specific.
Thermostimulative shape‐memory effect of reactive compatibilized high‐density polyethylene/poly(ethylene terephthalate) blends by an ethylene–butyl acrylate–glycidyl methacrylate terpolymer (2009)

Abstract High‐density polyethylene (HDPE)/poly(ethylene terephthalate) (PET) blends were prepared by means of melt extrusion with ethylene–butyl acrylate–glycidyl methacrylate terpolymer (EBAGMA) as a reactive compatibilizer. The effects of the EBAGMA and PET contents, recovery temperature, and stretch ratio on the thermostimulative shape‐memory behavior of the blends were studied. The results show that the addition of EBAGMA to the HDPE/PET blends obviously improved the compatibility and the shape‐memory effects of the blends. The response temperature was determined by the melting point of HDPE, and the shape‐recovery ratio of the 90/10/5 HDPE/PET/EBAGMA blend reached nearly 100%. © 2009 Wiley Periodicals, Inc. J Appl Polym Sci, 2009
Pathways in Surgery (2012)

Part 1: Non-emergencies Lumps and tenderness Swellings in the neck: goitre swellings in the parotid region Lump in the breast, breast pain, nipple discharge Management of carcinoma of the breast Dysphagia Chronic or recurrent upper abdominal pain Palpable abdominal mass Jaundice Change in bowel habit: 'piles' Lump in the groin Scrotal swellings: the empty scrotum Disturbances of micturition: retention anuria Chronic ischaemia of the lower limb Varicose veins and ulcers Preparation for operation The operation and early postoperative period Ear, nose and throat Eyes Orthopaedics Part 2: Emergencies Cardiorespiratory arrest and cardiac ischaemia The severely injured patient Head injuries Burns and loss of skin Intensive care The acute abdomen: an approach The acute abdomen: intestinal obstruction The acute abdomen: epigastric pain pain in the right and left iliac fosse The acute abdomen and the genitourinary tract Acute ischaemia of the limbs Neonatal and paediatric presentations.
Analysis of the Quaternary Structure, Substrate Specificity, and Catalytic Mechanism of Valine Dehydrogenase (1997)

The solution of the three-dimensional structure of Bacillus sphaericus leucine dehydrogenase has enabled us to undertake a homology-based modeling exercise on the sequence differences between the families of leucine (LeuDH) and valine (ValDH) dehydrogenases. This analysis indicates that the secondary structure elements in the core of the two domains of a single subunit of these enzymes are conserved, as are residues directly implicated in the recognition of the nucleotide cofactor and in catalysis. Comparison of the sequences indicates that the residues in the pocket accommodating the side chain of the amino acid substrate are conserved between these two enzymes, suggesting that the small differences in specificity arise from minor changes in molecular structure, possibly associated with shifts of the main chain rather than mutation of residues in the pocket itself. While B. sphaericus LeuDH is an octamer, both Streptomyces cinnamonensis and Streptomyces coelicolor ValDHs are dimers. The differences in quaternary structure can be understood in terms of the deletion in the latter of a C-terminal loop, which forms important interactions around the four-fold axis in LeuDH.
Antibody response in sows and piglets following vaccination against Mycoplasma hyopneumoniae, toxigenic Pasteurella multocida, and Actinobacillus pleuropneumoniae. (2004)

The aim of the experimental study was to compare the humoral immune response and occurrence of adverse effects following single or multiple simultaneous vaccination of sows against Mycoplasma hyopneumonia, toxigenic Pasteurella multocida, and Actinobacillus pleuropneumoniae. In addition, passively transferred antibodies to piglets were studied until weaning at 3 weeks of age. Fever was seen in a few sows within the first 12 hours after the 1st and 2nd vaccination. No difference in the occurrence of other adverse effects was observed between groups. Antibody levels were significantly higher in vaccinated sows and their offspring compared with the control group. This was found to be independent of single or simultaneous vaccinations with the 3 vaccines. In conclusion, applying multiple vaccines simultaneously to sows appeared not to influence the occurrence of adverse effects or the sow's serum levels of antibodies at the time of farrowing, nor the offspring's serum levels up to 3 weeks of age.
Connective Tissue Growth Factor Is a Mediator of Angiotensin II–Induced Fibrosis (2003)

Background— Angiotensin II (Ang II) participates in the development of fibrosis during vascular damage. Connective tissue growth factor (CTGF) is a novel fibrotic mediator. However, the potential link between CTGF and Ang II has not been investigated. Methods and Results— In vivo Ang II effects were studied by systemic infusion into normal rats to evaluate CTGF and extracellular matrix protein (ECM) expression by immunohistochemistry. In aorta of Ang II–infused rats, CTGF staining was markedly increased and ECM overexpression was observed. An AT 1 antagonist diminished CTGF and ECM. In growth-arrested vascular smooth muscle cells, Ang II induced CTGF mRNA expression after 1 hour, remained elevated up to 24 hours, and increased CTGF protein production, which was increased up to 72 hours. The AT 1 antagonist blocked Ang II–induced CTGF gene and protein expression. Early CTGF upregulation is independent of new protein synthesis. Several intracellular signals elicited by Ang II are involved in CTGF synthesis, including protein kinase C activation, reactive oxygen species, and transforming growth factor-β endogenous production. Incubation with a CTGF antisense oligonucleotide decreased CTGF and fibronectin upregulation caused by Ang II. Conclusions— Our results show that Ang II, via AT 1 , increases CTGF in vascular cells both in vivo and in vitro. This novel finding suggests that CTGF may be a mediator of the profibrogenic effects of Ang II in vascular diseases.
Next Generation 4G WiMAX Networks - IEEE 802.16 Standard (2012)

This paper gives an overview about the various PHY and MAC layer specification which define the IEEE 802.16 standard and which define the Fixed WiMAX (Ver. 802.16d-2004) and Mobile WiMAX (Ver. 802.16e-2005) network scenarios. We also discuss about the various updates in the Advanced Air Interface update (802.16m -2011), which aims at fulfilling the 4G requirements as put forward by the ITU IMT-Advanced requirements.
Hormone-Induced Proliferation and Differentiation of Granulosa Cells: A Coordinated Balance of the Cell Cycle Regulators Cyclin D2 and p27Kip1 (1998)

The proliferation and terminal differentiation of granulosa cells are critical for normal follicular growth, ovulation, and luteinization. Therefore, the in situ localization and hormonal regulation of cell cycle activators (cyclin D1, D2, and D3) and cell cycle inhibitors (p27Kip1 and p21Cip1) were analyzed in ovaries of mice and rats at defined stages of follicular growth and differentiation. Cyclin D2 mRNA was specifically localized to granulosa cells of growing follicles, while cyclin D1 and cyclin D3 were restricted to theca cells. In hypophysectomized (H) rats, cyclin D2 mRNA and protein were increased in granulosa cells by treatment with estradiol or FSH and were increased maximally by treatment with both hormones. In serum-free cultures of rat granulosa cells, cyclin D2 mRNA was rapidly elevated in response to FSH, forskolin, and estradiol, indicating that estradiol as well as cAMP can act directly and independently to increase cyclin D2 expression. The levels of p27Kip1 protein were not increased in response to estradiol or FSH. In contrast, when ovulatory doses of human CG (LH) were administered to hormonally primed H rats to stimulate luteinization, cyclin D2 mRNA and protein were rapidly decreased and undetectable within 4 h, specifically in granulosa cells of large follicles. Also in response to LH, the expression of the cell cycle inhibitor p27Kip1 was induced between 12 and 24 h (p21Cip1 was induced within 4 h) and remained elevated specifically in luteal tissue. A critical role for cyclin D2 in the hormone-dependent phase of follicular growth is illustrated by the ovarian follicles of cyclin D2-/- mice, which do not undergo rapid growth in response to hormones, but do express markers of FSH/LH action, cell cycle exit, and terminal differentiation. Collectively, these data indicate that FSH and estradiol regulate granulosa cell proliferation during the development of preovulatory follicles by increasing levels of cyclin D2 relative to p27Kip1 and that LH terminates follicular growth by down-regulating cyclin D2 concurrent with up-regulation of p27Kip1 and p21Cip1.
Phenolic compounds protect HepG2 cells from oxidative damage: Relevance of glutathione levels (2006)

In the present work, the potential hepatoprotective effects of five phenolic compounds against oxidative damages induced by tert-butyl hydroperoxide (t-BHP) were evaluated in HepG2 cells in order to relate in vitro antioxidant activity with cytoprotective effects. t-BHP induced considerable cell damage in HepG2 cells as shown by significant LDH leakage, increased lipid peroxidation, DNA damage as well as decreased levels of reduced glutathione (GSH). All tested phenolic compounds significantly decreased cell death induced by t-BHP (when in co-incubation). If the effects of quercetin are given the reference value 1, the compounds rank in the following order according to inhibition of cell death: luteolin (4.0) > quercetin (1.0) > rosmarinic acid (0.34) > luteolin-7-glucoside (0.30) > caffeic acid (0.21). The results underscore the importance of the compound's lipophilicity in addition to its antioxidant potential for its biological activity. All tested phenolic compounds were found to significantly decrease lipid peroxidation and prevent GSH depletion induced by t-BHP, but only luteolin and quercetin significantly decreased DNA damage. Therefore, the lipophilicity of the natural antioxidants tested appeared to be of even greater importance for DNA protection than for cell survival. The protective potential against cell death was probably achieved mainly by preventing intracellular GSH depletion. The phenolic compounds studied here showed protective potential against oxidative damage induced in HepG2 cells. This could be beneficial against liver diseases where it is known that oxidative stress plays a crucial role.
Plasma 3-Nitrotyrosine in Cigarette Smokers (1997)

Peroxynitrite has been associated with increased oxidative reactions and DNA damage in inflamed tissues as it may cause a reduction of plasma antioxidants as well. Nitration of tyrosine residues of proteins leads to the production of 3-nitrotyrosine (NTYR), which may be considered as a marker of NO.-dependent oxidative damage. We developed a highly sensitive method to detect NTYR in human plasma and tested it in cigarette smokers and in healthy control subjects. Peripheral venous blood (10 ml) was obtained in 20 healthy, asymptomatic cigarette smokers (13 males, 7 females; age: 49 +/- 11 yr) and in 18 healthy nonsmokers (10 males and 8 females; age: 36 +/- 6 yr). In smokers, plasma nicotine, cotinine, and expired CO levels were measured. NTYR was determined with a sequential HPLC/gas chromatography-thermal energy analysis (GC-TEA) technique. The total plasma Trolox-equivalent antioxidant capacity (TEAC) was also measured using metmyoglobin as peroxidase and a phenothiazine as a radical donor. NTYR was detectable (detection limit: 0.02 ng/injection) in 11 smokers (mean +/- SD: 1.60 +/- 1.24 ng/mg protein) and in two nonsmokers (1.10 and 1.20 ng/mg protein, respectively). NTYR was not associated with nicotine and cotinine levels or expired CO in smokers. Plasma TEAC in smokers was significantly lower (0.43 +/- 0.38 mM) than in nonsmokers (1.42 +/- 0.3 mM; p < 0.001) and showed a biphasic, negative relationship with NTYR (r = 0.96, p < 0.001). This highly sensitive HPLC/GC-TEA method for detection and quantitation of plasma NTYR may be used for monitoring oxidative reactions associated with tobacco smoking. This assay might be incorporated into molecular epidemiologic studies for lung chronic inflammatory and neoplastic disorders in which exposure to oxidants may be an important risk factor.
JaCIL: a CLI to JVM Compiler (2006)

Both the .NET Framework via the Common Language Infrastructure (CLI) and the Java Virtual Machine (JVM) provide a managed, virtual execution environment for running high-level virtual machine code. As these two platforms become ubiquitous, it is of pragmatic and academic interest to have the capability of running CLI code on the JVM and vice versa. This project developed JaCIL (pronounced "jackal"), a CLI assembly to JVM class file bytecode compiler framework. JaCIL also provides a user program for running CLI-to-JVM translations and a runtime library to support the translated code.
Trends in asthma prevalence, health care use, and mortality in the United States, 2001-2010. (2012)

Asthma prevalence increased from 2001 to 2010: An estimated 25.7 million persons had asthma in 2010. Certain demographic groups had higher asthma prevalence: children aged 0–17 years, females, black persons, persons of multiple race, Puerto Rican persons, and persons with a family income below the poverty level. This report examines rates for asthma outcomes (health care encounters and death) for persons with asthma rather than for the general population. Rates for the general population represent the burden of asthma in the United States. Rates for the population with asthma take into account changes in asthma prevalence over time and differences in asthma prevalence among demographic groups. From 2001 to 2009, rates for ED visits and hospitalizations per 100 persons with asthma remained stable, while rates for asthma visits in primary care settings (physician offices or hospital outpatient departments) and asthma deaths declined. For the period 2007–2009, asthma visit rates (per 100 persons with asthma) in primary care settings for black persons were similar to those for white persons, but rates for asthma ED visits, hospitalizations, and death (per 1,000) were higher. Compared with adults, children aged 0–17 years had a higher rate for asthma visits in primary care settings and EDs, but had a similar hospitalization rate and a lower asthma death rate.
Triphenyl phosphite as a coke inhibitor during naphtha pyrolysis (1989)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTTriphenyl phosphite as a coke inhibitor during naphtha pyrolysisSanjay Vaish and Deepak KunzruCite this: Ind. Eng. Chem. Res. 1989, 28, 9, 1293–1299Publication Date (Print):September 1, 1989Publication History Published online1 May 2002Published inissue 1 September 1989https://pubs.acs.org/doi/10.1021/ie00093a005https://doi.org/10.1021/ie00093a005research-articleACS PublicationsRequest reuse permissionsArticle Views171Altmetric-Citations21LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts