gebhart/patrepeval huggingface dataset:
Electrospun Acetalated Dextran Scaffolds for Temporal Release of Therapeutics (2013)

Electrospun acetalated dextran (Ac-DEX) scaffolds were fabricated to encapsulate resiquimod, an immunomodulatory toll-like-receptor (TLR) agonist. Ac-DEX has been used to fabricate scaffolds for sustained and temporal delivery of therapeutics because it has tunable degradation rates that are dependent on its synthesis reaction time or the molecular weight of dextran. Additionally, as opposed to commonly electrospun polyesters that shift the local pH upon degradation, the degradation products of Ac-DEX are pH-neutral: dextran, an alcohol, and the metabolic byproduct acetone. Formulations of Ac-DEX with two different degradation rates were used in this study. The effects of electrospinning conditions on the scaffold size and morphology were examined as well as fibroblast adhesion as imaged with fluorescence microcopy and scanning electron microscopy. Macrophage (MΦ) viability further indicates that the scaffolds are cytocompatible. Also, the controlled release profiles of resiquimod from loaded scaffolds and nitric oxide (NO) production by MΦ incubated with these scaffolds show the potential for Ac-DEX scaffolds to be used to temporally and efficiently deliver therapeutics. Overall, we present a novel scaffold that can have tunable and unique drug release rates for tissue engineering, drug delivery, immunomodulation, and wound healing applications.
Signal Conditioning for the Kalman Filter: Application to Satellite Attitude Estimation with Magnetometer and Sun Sensors (2016)

Most satellites use an on-board attitude estimation system, based on available sensors. In the case of low-cost satellites, which are of increasing interest, it is usual to use magnetometers and Sun sensors. A Kalman filter is commonly recommended for the estimation, to simultaneously exploit the information from sensors and from a mathematical model of the satellite motion. It would be also convenient to adhere to a quaternion representation. This article focuses on some problems linked to this context. The state of the system should be represented in observable form. Singularities due to alignment of measured vectors cause estimation problems. Accommodation of the Kalman filter originates convergence difficulties. The article includes a new proposal that solves these problems, not needing changes in the Kalman filter algorithm. In addition, the article includes assessment of different errors, initialization values for the Kalman filter; and considers the influence of the magnetic dipole moment perturbation, showing how to handle it as part of the Kalman filter framework.
Timing synchronization in high mobility OFDM systems (2004)

OFDM systems are sensitive to timing synchronization errors. Utilizing pilot-aided channel estimators in OFDM systems can further increase this sensitivity. This is shown in Y. Mostofi et al. (Oct. 2002) where authors have analyzed the-effect of such errors on a pilot-aided channel estimator in a fixed wireless environment. They proposed an algorithm that exploits this sensitivity to improve timing synchronization without additional training overhead. The effect of these errors and design of suitable synchronization algorithms for high mobility applications, however, have not been studied before. In this paper we extend the analysis in Y. Mostofi et al. (Oct. 2002) to high mobility environments. Timing synchronization becomes more challenging for mobile applications since power-delay profile of the channel may change-rapidly due to the sporadic birth and death of the channel paths. We find analytical expressions for channel estimation error in the presence of timing synchronization errors and mobility. We show that the sensitivity of the channel estimator can still be exploited to improve timing synchronization in high mobility environments. Then we extend the algorithm proposed in Y. Mostofi et al. (Oct. 2002) to high mobility applications. Finally simulation results show the performance of the algorithm in high delay and Doppler spread environments.
SOLDER-FILLING OF A CICC CABLE FOR THE EFDA DIPOLE MAGNET (2008)

Several prototype Cable‐In‐Conduit‐Conductors (CICC) for the superconducting EDIPO (Efda DIPOle) revealed a degradation of their critical current (Ic) increasing with each loading cycle. The strong Lorentz‐forces during operation in combination with the limited support of the single strands against these forces are thought to be the cause of the permanent degradation of the brittle Nb3Sn superconductor from which the multi‐stranded CICC are made. In summer 2006 EFDA started to explore the possibility to remedy the Ic degradation by solder‐filling the conductor in order to mechanically stabilize the twisted‐strand cable inside the conduit. This solution was not considered as the main one, but as an emergency solution to be applied to the completed magnet, should every other option fail. The solder‐filling approach was previously applied with success in some cases. Some issues, however, needed to be clarified before this solution could be proposed for the EDIPO project. The most important among them are the choice of solder material, details of the solder filling process, and the thermo‐mechanical implications of a solder‐filled, high‐field, high‐current cable. This work, being reported here, made use not only of simulation but also of experiments, such as the mechanical testing of solder filled cables at cryogenic temperatures.
Regulation of corneal keratin-12 gene expression by the human Krüppel-like transcription factor 6. (2002)

The expression of KLF6 in HCE cells and its role in the regulation of K12 gene expression were demonstrated.
Performance analysis of 4WS vehicle based on different control strategy (2009)

The 2DOF model and differential equation of 4ws vehicle was established. Based on proportional control strategy of zero side-slip angles of mass center and smallest response error, the steering performance of vehicle was simulated. From results, we could know that zero side-slip angle of mass center control strategy was better, but vehicle had more under-steering characteristic in high speed. In order to solve this question, the control strategy of yaw rate feedback was used and steering performance was simulated. It provided that vehicle performance was improved at high speed using this strategy.
Synthesis of (+)‐Discodermolide by Catalytic Stereoselective Borylation Reactions (2014)

The marine natural product (+)-discodermolide was first isolated in 1990 and, to this day, remains a compelling synthesis target. Not only does the compound possess fascinating biological activity, but it also presents an opportunity to test current methods for chemical synthesis and provides an inspiration for new reaction development. A new synthesis of discodermolide employs a previously undisclosed stereoselective catalytic diene hydroboration and also establishes a strategy for the alkylation of chiral enolates. Furthermore, this synthesis of discodermolide provides the first examples of the asymmetric 1,4-diboration of dienes and borylative diene-aldehyde couplings in complex-molecule synthesis.
Generalization of the codebook updating method of the k-means algorithm (1999)

At each iteration of codebook training, the K-means algorithm finds a new codevector and partition by satisfying the centroid condition and the nearest neighbor condition alternatively and satisfies the iterative descent property. We generalize the codebook updating method of the K-means algorithm without affecting the iterative descent property. We also present and re-interpret several algorithms that are included into the category of the generalized K-means algorithm.
Midkine gene transfer after myocardial infarction in rats prevents remodelling and ameliorates cardiac dysfunction (2009)

Overexpression of MK prevents LV remodelling and ameliorates LV dysfunction by anti-apoptotic and pro-angiogenic effects. MK gene transfer may provide a new therapeutic modality in ischemic cardiomyopathy and ischemic heart failure.
Changes in Glucose and Fat Metabolism in Response to the Administration of a Hepato-Preferential Insulin Analog (2014)

Endogenous insulin secretion exposes the liver to three times higher insulin concentrations than the rest of the body. Because subcutaneous insulin delivery eliminates this gradient and is associated with metabolic abnormalities, functionally restoring the physiologic gradient may provide therapeutic benefits. The effects of recombinant human insulin (HI) delivered intraportally or peripherally were compared with an acylated insulin model compound (insulin-327) in dogs. During somatostatin and basal portal vein glucagon infusion, insulin was infused portally (PoHI; 1.8 pmol/kg/min; n = 7) or peripherally (PeHI; 1.8 pmol/kg/min; n = 8) and insulin-327 (Pe327; 7.2 pmol/kg/min; n = 5) was infused peripherally. Euglycemia was maintained by glucose infusion. While the effects on liver glucose metabolism were greatest in the PoHI and Pe327 groups, nonhepatic glucose uptake increased most in the PeHI group. Suppression of lipolysis was greater during PeHI than PoHI and was delayed in Pe327 infusion. Thus small increments in portal vein insulin have major consequences on the liver, with little effect on nonhepatic glucose metabolism, whereas insulin delivered peripherally cannot act on the liver without also affecting nonhepatic tissues. Pe327 functionally restored the physiologic portal-arterial gradient and thereby produced hepato-preferential effects.
Intelligent fire warning system applying fuzzy theory (2002)

The authors discuss the technology of fuzzy expert systems. They introduce a fuzzy reasoning method to determine whether a fire really exists or not. The method is based on time sequential sensed data and various environmental conditions. Fuzzy logic is used to judge and act in an ambiguous situation before the final decision is made. An intelligent fire warning system established experimentally in a building is described.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">></ETX>
A wearable system that knows who wears it (2014)

Body-area networks of pervasive wearable devices are increasingly used for health monitoring, personal assistance, entertainment, and home automation. In an ideal world, a user would simply wear their desired set of devices with no configuration necessary: the devices would discover each other, recognize that they are on the same person, construct a secure communications channel, and recognize the user to which they are attached. In this paper we address a portion of this vision by offering a wearable system that unobtrusively recognizes the person wearing it. Because it can recognize the user, our system can properly label sensor data or personalize interactions.
Exploration of underwater life with an acoustically controlled soft robotic fish (2018)

Closeup exploration of underwater life requires new forms of interaction, using biomimetic creatures that are capable of agile swimming maneuvers, equipped with cameras, and supported by remote human operation. Current robotic prototypes do not provide adequate platforms for studying marine life in their natural habitats. This work presents the design, fabrication, control, and oceanic testing of a soft robotic fish that can swim in three dimensions to continuously record the aquatic life it is following or engaging. Using a miniaturized acoustic communication module, a diver can direct the fish by sending commands such as speed, turning angle, and dynamic vertical diving. This work builds on previous generations of robotic fish that were restricted to one plane in shallow water and lacked remote control. Experimental results gathered from tests along coral reefs in the Pacific Ocean show that the robotic fish can successfully navigate around aquatic life at depths ranging from 0 to 18 meters. Furthermore, our robotic fish exhibits a lifelike undulating tail motion enabled by a soft robotic actuator design that can potentially facilitate a more natural integration into the ocean environment. We believe that our study advances beyond what is currently achievable using traditional thruster-based and tethered autonomous underwater vehicles, demonstrating methods that can be used in the future for studying the interactions of aquatic life and ocean dynamics.
Reference range data base for serum chemistry and hematology values in laboratory animals (1986)

A reference range data base containing serum chemistry and hematology values on over 3000 animals is described. Data listed include the mean, standard deviation, and 10th and 90th percentiles for each of the following parameters. Serum chemistry: sodium, potassium, chloride, calcium, inorganic phosphorus, urea nitrogen, creatinine, total bilirubin, total protein, glucose, cholesterol, triglycerides, alkaline phosphatase, aspartate aminotransferase, alanine aminotransferase, gamma-glutamyltransferase (monkey only), lactate dehydrogenase (dog only), and creatine kinase (dog only). Hematology: hematocrit, hemoglobin, red blood cells, reticulocytes, mean cell volume, mean cell hemoglobin, mean cell hemoglobin percent, platelets, white blood cells, neutrophils, eosinophils, basophils, lymphocytes, monocytes, and stabs. The species included are mouse, rat, hamster, rabbit, beagle dog, and cynomolgus monkey. The use of the reference ranges in routine computerized data collection is discussed.
High Sensitivity Optically Pumped Quantum Magnetometer (2013)

Quantum magnetometers based on optical pumping can achieve sensitivity as high as what SQUID-based devices can attain. In this paper, we discuss the principle of operation and the optimal design of an optically pumped quantum magnetometer. The ultimate intrinsic sensitivity is calculated showing that optimal performance of the magnetometer is attained with an optical pump power of 20 μW and an operation temperature of 48°C. Results show that the ultimate intrinsic sensitivity of the quantum magnetometer that can be achieved is 327 fT/Hz(½) over a bandwidth of 26 Hz and that this sensitivity drops to 130 pT/Hz(½) in the presence of environmental noise. The quantum magnetometer is shown to be capable of detecting a sinusoidal magnetic field of amplitude as low as 15 pT oscillating at 25 Hz.
Magnetic resonance imaging with gradient sound respiration guide (2021)

Respiratory motion management is crucial for high-resolution MRI of the heart, lung, liver and kidney. In this article, respiration guide using acoustic sound generated by pulsed gradient waveforms was introduced in the pulmonary ultrashort echo time (UTE) sequence and validated by comparing with retrospective respiratory gating techniques. The validated sound-guided respiration was implemented in non-contrast enhanced renal angiography. In the sound-guided respiration, breathe-in and-out instruction sounds were generated with sinusoidal gradient waveforms with two different frequencies (602 and 321 Hz). Performance of the sound-guided respiration was evaluated by measuring sharpness of the lung-liver interface with a 10-90% rise distance, w10-90, and compared with three respiratory motion managements in a free-breathing UTE scan: without respiratory gating (w/o gating), 0-dimensional k-space navigator (k-point navigator), and image-based self-gating (Img-SG). The sound-guided respiration was implemented in stack-of-stars balanced steady-state free precession with inversion recovery preparation for renal angiography. No subjects reported any discomfort or inconvenience with the sound-guided respiration in pulmonary or renal MRI scans. The lung-liver interface of the UTE images for sound-guided respiration (w10-90 = 6.99 ± 2.90 mm), k-point navigator (8.51 ± 2.71 mm), and Img-SG (7.01 ± 2.06 mm) was significantly sharper than that for w/o gating (17.13 ± 2.91 mm; p < 0.0001 for all of sound-guided respiration, k-point navigator and Img-SG). Sharpness of the lung-liver interface was comparable between sound-guided respiration and Img-SG (p = 0.99), but sound-guided respiration achieved better visualization of pulmonary vasculature. Renal angiography with the sound-guided respiration clearly delineated renal, segmental and interlobar arteries. In conclusion, the gradient sound guided respiration can facilitate a consistent diaphragm position in every breath and achieve performance of respiratory motion management comparable to image-based self-gating.
Primate globus pallidus and subthalamic nucleus: functional organization (1985)

Neuronal relations to active movements of individual body parts and neuronal responses to somatosensory stimulation were studied in the external (GPe) and internal (GPi) segments of the globus pallidus (GP) and the subthalamic nucleus (STN) of awake monkeys. In GPe (n = 249), GPi (n = 151), and STN (n = 153), 47, 29, and 28% of the cells, respectively, discharged in relation to active arm movements, 10, 11, and 15% to leg movements, and 22, 22, and 18% to orofacial movements. Of the neurons whose activity was related to arm movements, 26, 16, and 21% in GPe, GPi, and STN, respectively, discharged in relation to movements of distal parts of the limb. Of cells whose discharge was related to active limb movements, 37, 22, and 20% in GPe, GPi, and STN, respectively, also responded to passive joint rotation, which was usually specific in terms of joint and direction of movement. Only a small percentage of cells responded to muscle or joint palpation, tendon taps, or cutaneous stimulation. Short-latency, direction-specific neuronal responses to load perturbations confirmed the existence of proprioceptive driving. In both GPe and GPi, leg movement-related neurons were centrally located in the rostrocaudal and dorsoventral dimensions. In contrast, arm movement-related cells were found throughout the entire rostrocaudal extent of both segments, although in greater numbers caudally. In the central portions they were situated largely inferior and lateral to leg movement-related neurons. Neurons related to orofacial movements were largely confined to the caudal halves of both segments, where they were located largely ventral to arm movement-related cells. The STN cells whose activity was related to leg movements were observed largely in the central portions of the nucleus in the rostrocaudal and mediolateral dimensions. Cells whose activity was related to arm movements were found throughout the rostrocaudal extent of the nucleus, but were most numerous at the rostral and caudal poles. Neurons related to movements of the facial musculature and to licking and chewing movements were distributed over the entire rostrocaudal extent of the nucleus, where they generally occupied the ventrolateral regions. In all three nuclei, neurons with similar functional properties were sometimes clustered together. Within the arm and leg areas, however, there was no clear evidence for a simple organization of clusters related to different parts of the limb. These studies provide further evidence for a role of the basal ganglia in the control of limb movements.(ABSTRACT TRUNCATED AT 400 WORDS)
Structures of <i>trans</i>-2-enoyl-CoA reductases from <i>Clostridium acetobutylicum</i> and <i>Treponema denticola</i>: insights into the substrate specificity and the catalytic mechanism (2012)

TERs (trans-2-enoyl-CoA reductases; EC 1.3.1.44), which specifically catalyse the reduction of crotonyl-CoA to butyryl-CoA using NADH as cofactor, have recently been applied in the design of robust synthetic pathways to produce butan-1-ol as a biofuel. We report in the present paper the characterization of a CaTER (a TER homologue in Clostridium acetobutylicum), the structures of CaTER in apo form and in complexes with NADH and NAD+, and the structure of TdTER (Treponema denticola TER) in complex with NAD+. Structural and sequence comparisons show that CaTER and TdTER share approximately 45% overall sequence identity and high structural similarities with the FabV class enoyl-acyl carrier protein reductases in the bacterial fatty acid synthesis pathway, suggesting that both types of enzymes belong to the same family. CaTER and TdTER function as monomers and consist of a cofactor-binding domain and a substrate-binding domain with the catalytic active site located at the interface of the two domains. Structural analyses of CaTER together with mutagenesis and biochemical data indicate that the conserved Glu75 determines the cofactor specificity, and the conserved Tyr225, Tyr235 and Lys244 play critical roles in catalysis. Upon cofactor binding, the substrate-binding loop changes from an open conformation to a closed conformation, narrowing a hydrophobic channel to the catalytic site. A modelling study shows that the hydrophobic channel is optimal in both width and length for the binding of crotonyl-CoA. These results provide molecular bases for the high substrate specificity and the catalytic mechanism of TERs.
Medium access control of wireless LANs for mobile computing (1994)

To provide high-speed seamless services for mobile computing, an effective medium access control capable of dealing with mobility issues in multicell wireless local area networks is needed. The physical layers discussed include direct sequence spread spectrum (DS-SS), frequency hopped spread spectrum (FH-SS), and diffuse infrared. Both spread spectrum transmissions are in the 2.4 to 2.4835 GHz ISM band, according to FCC part 15.247.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">></ETX>
Histone deacetylase inhibitors are potent inducers of gene expression in latent EBV and sensitize lymphoma cells to nucleoside antiviral agents (2011)

Induction of EBV lytic-phase gene expression, combined with exposure to an antiherpes viral drug, represents a promising targeted therapeutic approach to EBV-associated lymphomas. Short-chain fatty acids or certain chemotherapeutics have been used to induce EBV lytic-phase gene expression in cultured cells and mouse models, but these studies generally have not translated into clinical application. The recent success of a clinical trial with the pan-histone deacetylase (pan-HDAC) inhibitor arginine butyrate and the antiherpes viral drug ganciclovir in the treatment of EBV lymphomas prompted us to investigate the potential of several HDAC inhibitors, including some new, highly potent compounds, to sensitize EBV(+) human lymphoma cells to antiviral agents in vitro. Our study included short-chain fatty acids (sodium butyrate and valproic acid); hydroxamic acids (oxamflatin, Scriptaid, suberoyl anilide hydroxamic acid, panobinostat [LBH589], and belinostat [PXD101]); the benzamide MS275; the cyclic tetrapeptide apicidin; and the recently discovered HDAC inhibitor largazole. With the exception of suberoyl anilide hydroxamic acid and PXD101, all of the other HDAC inhibitors effectively sensitized EBV(+) lymphoma cells to ganciclovir. LBH589, MS275, and largazole were effective at nanomolar concentrations and were 10(4) to 10(5) times more potent than butyrate. The effectiveness and potency of these HDAC inhibitors make them potentially applicable as sensitizers to antivirals for the treatment of EBV-associated lymphomas.
Extraction and modification of hemicellulose from lignocellulosic biomass: A review (2021)

Abstract Hemicellulose is a carbohydrate biopolymer second only to cellulose, which is rich and has a broad application prospect. The limitation of high-value utilization of hemicellulose has been a long-standing challenge due to its complex and diversified structure. The extraction and subsequent modification of hemicellulose from lignocellulosic biomass represent a promising pathway toward this goal. Herein, the extraction processes including physical pretreatment, chemical pretreatment, and combined pretreatment for separating hemicellulose from lignocellulosic biomass were introduced, and the advantages and disadvantages of various extraction procedures were also described. The chemical modification of hemicellulose such as etherification, esterification, grafting, and cross-linking modification was reviewed in detail. The separation and modification of hemicellulose in the future are prospected based on the earlier studies.