Antibiotic adjuvants: identification and clinical use (2013)

The discovery of penicillin by Alexander Fleming in 1928 changed the course of medicine. Since then, antibiotics have represented virtually the only effective treatment option for bacterial infections. However, their efficacy has been seriously compromised by over-use and misuse of these drugs, which have led to the emergence of bacteria that are resistant to many commonly used antibiotics. Bacteria present three general categories of antibiotic resistance: acquired, intrinsic and adaptive (Alekshun and Levy, 2007). Acquired resistance is the result of mutations in chromosomal genes or the incorporation of new genetic material (plasmids, transposons, integrons, naked DNA) by horizontal gene transfer. It provides selective advantage in the presence of antimicrobial compounds and it is passed on to progeny resulting in the emergence of antibiotic-resistant strains. Bacteria have an extraordinary ability to acquire antibiotic resistance, which is best understood from an evolutionary perspective. Thus, while the use of antibiotics as therapeutics started less than 70 years ago, bacterial resistance mechanisms have co-evolved with natural antimicrobial compounds for billions of years (D'Costa et al., 2011). Bacterial intrinsic resistance to antibiotics is, in contrast to acquired resistance, not related to antibiotic selection but to the specific characteristics of the bacteria. Gram-negative bacteria are for example resistant to many antibiotics due to the presence of a lipopolysaccharide-containing outer membrane with low permeability that functions as an extra barrier preventing the entrance of antibiotics into the cell. Furthermore, many bacteria contain efflux pumps that pump antibiotics out of the cell and thereby decrease their effectiveness. Finally, adaptive resistance involves a temporary increase in the ability of a bacterium to survive an antibiotic, mainly as the result of alterations in gene and/or protein expression triggered by environmental conditions (i.e. stress, nutrient conditions, growth state, subinhibitory levels of the antibiotic) (Poole, 2012). In contrast to intrinsic and acquired resistance mechanisms, which are stable and can be transmitted on to the progeny, adaptive resistance is transient and usually reverts upon the removal of the inducing condition. The combination of these antibiotic resistance mechanisms has led to the emergence of multidrug-resistant pathogens, which are a serious threat for medical care. Among other strategies, the discovery or development of new antibiotic agents had been thought to be a solution to overcome the deficiencies of the existing ones. However, development and marketing approval of new antibiotics have not kept pace with the increasing public health threat of bacterial drug resistance. An alternative to the development of new antibiotics is to find potentiators of the already existing ones, a less expensive alternative to the problem (Ejim et al., 2011; Kalan and Wright, 2011). Potentiators of antibiotic activity are known as antibiotic adjuvants. These compounds are active molecules, preferably with non-antibiotic activity, that in combination with antibiotics enhance the antimicrobial activity of the latter. Combinations of two antibiotics are also considered adjuvants when their effect is synergistic (i.e. the co-administration of the two drugs has a significantly greater effect than that of each antibiotic alone). Antibiotic adjuvants can function either by reversing resistance mechanisms in naturally sensitive pathogens or by sensitizing intrinsic resistant strains. Identification of new molecules that can function as adjuvants is currently an important topic of research. In this context, Taylor and colleagues have recently published a work aimed to identify molecules that potentiate the antimicrobial activity of antibiotics commonly used against Gram-positive bacteria but that have, however, little or no effect on Gram-negative pathogens (Taylor et al., 2012). Using the Gram-negative bacterium Escherichia coli as model in combination with the aminocoumarin antibiotic novobiocin, the authors set up and performed a forward chemical genetic screen with a library of 30 000 small molecules. Three rounds of selection in which molecules that did not enhance novobiocin activity, that had intrinsic antibacterial activity, or that had undesirable secondary effects were discarded, identified four new compounds that increase the antimicrobial activity of novobiocin and other ‘Gram-positive’ antibiotics against E. coli. All identified molecules alter bacterial cell shape by blocking cytoskeleton proteins (i.e. MerB) and/or peptidoglycan biosynthesis, and act synergistically with the antibiotic. Authors conclude that cell shape alterations likely disturb the influx/efflux machinery of Gram-negative bacteria and thereby enable the accumulation of otherwise excluded antibiotics. This finding provides an attractive strategy to combat the intrinsic antibiotic resistance of Gram-negative bacteria and can aid the development of new therapies that enhance the activity of existing antibiotics against them. The four compounds identified in this work potentiate antibiotic activity by affecting a vital physiological bacterial function, but potentiation of antibiotic activity can also occur by: (i) inhibition of antibiotic resistance elements; (ii) enhancement of the uptake of the antibiotic through the bacterial membrane; (iii) direct blocking of efflux pumps; and (iv) changing the physiology of resistant cells (i.e. dispersal of biofilms to planktonic cells which are more susceptible to antibiotics) (Kalan and Wright, 2011). Examples of currently used/identified antibiotic adjuvants are given in Table 1. The most successful and clinically used strategy to date has been the combination of a β-lactam antibiotic with a β-lactamase inhibitor adjuvant. The β-lactamase inhibitor enhances the action of the antibiotic by inhibiting the function of the β-lactam degrading enzyme β-lactamases. Thus, the adjuvant restores the activity of the β-lactam antibiotic against β-lactamase-producing pathogens. Three β-lactamase inhibitors have already been registered: clavulanic acid, tazobactam and sulbactam (Drawz and Bonomo, 2010) (Table 1). Clavulanic acid is mainly given in combination with the antibiotic amoxicillin, which has been commercialized as Augmentin® (Brown et al., 1976). Although this antimicrobial drug combination is on the market since 1981 and has been extensively used, the emergence of resistance to Augmentin in clinical isolates has been very low (Leflon-Guibout et al., 2000), which is another important advantage of pairing antibiotics with adjuvants. The strategy of pairing an inhibitor of antibiotic degrading enzymes with the antibiotic has also been applied against dehydropeptidase, an enzyme that degrades the β-lactam antibiotic imipenem. The adjuvant cilastatin inhibits the action of this enzyme and protects imipenem from degradation prolonging its antibacterial effect when given in combination (Balfour et al., 1996) (Table 1). Inhibitors for aminoglycoside-modifying enzymes and erythromycin ribosomal methylases have also been identified (Feder et al., 2008; Vong et al., 2012), but none of them has been considered sufficiently potent for further development as antibiotic adjuvants. Another way of preventing antibiotic degradation is by targeting the bacterial regulatory systems involved in the expression of antibiotic resistance genes. Bacteria respond to specific environmental signals, such as presence of antibiotics, using signal transduction mechanisms (i.e. two-component systems). Inhibition of such regulatory systems is a promising strategy for the development of antibiotic adjuvants (Lee et al., 2009; Nguyen et al., 2010). Desirable candidates for antibiotic adjuvants are also those molecules that enhance antibiotic entrance into cells. Polymyxin E, also known as colistin, is a cationic polypeptide antibiotic that interferes with the LPS and permeabilizes the outer membrane of Gram-negative bacteria. Clinical use for this antibiotic has been limited due to toxicity concerns, but at lower concentrations it has been used as adjuvant and enhances the activity of the antibiotics rifampin and vancomycin against Gram-negative pathogens (Aoki et al., 2009; Gordon et al., 2010). Molecules that prevent antibiotics from being pump out the bacterial cells are also desirable adjuvants. Generally, there are several possibilities to achieve inhibition of bacterial efflux pumps (for review see Pagès and Amaral, 2009). One of the most promising starting points is the use of substrate analogues that compete with the antibiotic for the pump since such analogues can be rationally designed (Van Bambeke et al., 2010) (Table 1). To date, a large number of efflux pump inhibitors have been discovered and patented (Van Bambeke et al., 2010; Bhardwaj and Mohanty, 2012). Although the process of commercialization of these molecules is rather slow, efflux pump inhibitors represents a promising strategy for antibiotic combination therapy. Furthermore, adjuvants can enhance antibiotic potency by changing the physiology of resistant cells. An example is by disrupting the bacterial biofilm lifestyle, in which bacteria are more resistant to antibiotic (Stewart and Costerton, 2001). Mixtures of d-amino acids have been shown to disperse biofilm of Gram-positive and Gram-negative bacteria (Kolodkin-Gal et al., 2010). Moreover, the combination of antibiotic with antibiofilm exopolysaccharides is also a promising strategy to enhance the antimicrobial activity of common antibiotics, having the advantage that exopolysaccharides are not toxic for human tissues (Bernal and Llamas, 2012; Rendueles et al., 2013). In conclusion, the use of antibiotic adjuvants has two beneficial outcomes: enhancement of the antimicrobial effect and reduction of the occurrence of mutations that result in resistance. In this context, efforts to find such molecules should be intensified. Since environmental organisms are the source of most resistance genes and antibiotics (D'Costa et al., 2006), screens of bacterial natural products are likely to be productive in finding molecules that inhibit antibiotic resistance elements, as proven by the discovery of clavulanic acid (Brown et al., 1976). Additionally, a screen of a library of plant-derived compounds has also identified potentiators of antibiotics (Chusri et al., 2009), mainly through efflux pump inhibition. Although still poorly explored, inhibition of regulatory mechanisms that control bacterial virulence functions represents a promising strategy for antibiotic adjuvant therapy. The non-essential character of these functions may significantly reduce the development of resistance. The continuous advances in the development of new and potent high-throughput technologies will definitively allow the discovery of new compounds with antibiotic adjuvant activity. None declared.