gebhart/patrepeval huggingface dataset:
Tertiary aromatic amines as cure reaction promoters for unsaturated polyester resins. II. Low temperature studies (1986)

Abstract N,N ‐dimethyl‐ p ‐toludine (DMPT), N,N ‐dimethyl‐ m ‐toluidine (DMMT), and their isomeric blends, were compared to N,N ‐dimethylaniline (DMA) as cure reaction promoters for an unsaturated polyester resin using 1% benzoyl peroxide at 15°C and 10°C. The promoters showed the following order of efficiency (by weight) as indicated by decreased gel and cure times: DMPT > DMPT/DMMT blends > DMMT > DMA. Under these conditions the optimum promoter concentration was 0.3%. At this level or higher, 80/20 and 60/40 DMPT/DMMT blends (wt/wt) performed essentially equal to DMPT but superior to DMMT and DMA. Examination of cured samples using differential scanning calorimetry showed that resins cured with DMPT or isomeric blends of DMPT and DMMT with high DMPT contents displayed higher glass transition temperatures and greater degrees of cure than samples cured using DMMT or DMA.
CD318 is a ligand for CD6 (2017)

It has been proposed that CD6, an important regulator of T cells, functions by interacting with its currently identified ligand, CD166, but studies performed during the treatment of autoimmune conditions suggest that the CD6-CD166 interaction might not account for important functions of CD6 in autoimmune diseases. The antigen recognized by mAb 3A11 has been proposed as a new CD6 ligand distinct from CD166, yet the identity of it is hitherto unknown. We have identified this CD6 ligand as CD318, a cell surface protein previously found to be present on various epithelial cells and many tumor cells. We found that, like CD6 knockout (KO) mice, CD318 KO mice are also protected in experimental autoimmune encephalomyelitis. In humans, we found that CD318 is highly expressed in synovial tissues and participates in CD6-dependent adhesion of T cells to synovial fibroblasts. In addition, soluble CD318 is chemoattractive to T cells and levels of soluble CD318 are selectively and significantly elevated in the synovial fluid from patients with rheumatoid arthritis and juvenile inflammatory arthritis. These results establish CD318 as a ligand of CD6 and a potential target for the diagnosis and treatment of autoimmune diseases such as multiple sclerosis and inflammatory arthritis.
Leveraging User Reviews to Improve Accuracy for Mobile App Retrieval (2015)

Smartphones and tablets with their apps pervaded our everyday life, leading to a new demand for search tools to help users find the right apps to satisfy their immediate needs. While there are a few commercial mobile app search engines available, the new task of mobile app retrieval has not yet been rigorously studied. Indeed, there does not yet exist a test collection for quantitatively evaluating this new retrieval task. In this paper, we first study the effectiveness of the state-of-the-art retrieval models for the app retrieval task using a new app retrieval test data we created. We then propose and study a novel approach that generates a new representation for each app. Our key idea is to leverage user reviews to find out important features of apps and bridge vocabulary gap between app developers and users. Specifically, we jointly model app descriptions and user reviews using topic model in order to generate app representations while excluding noise in reviews. Experiment results indicate that the proposed approach is effective and outperforms the state-of-the-art retrieval models for app retrieval.
Discovery of a novel DNA polymerase inhibitor and characterization of its antiproliferative properties (2018)

Chromosomal duplication is targeted by various chemotherapeutic agents for the treatment of cancer. However, there is no specific inhibitor of DNA polymerases that is viable for cancer management. Through structure-based in silico screening of the ZINC database, we identified a specific inhibitor of DNA polymerase δ. The discovered inhibitor, Zelpolib, is projected to bind to the active site of Pol δ when it is actively engaged in DNA replication through interactions with DNA template and primer. Zelpolib shows robust inhibition of Pol δ activity in reconstituted DNA replication assays. Under cellular conditions, Zelpolib is taken up readily by cancer cells and inhibits DNA replication in assays to assess global DNA synthesis or single-molecule bases by DNA fiber fluorography. In addition, we show that Zelpolib displays superior antiproliferative properties to methotrexate, 5-flourouracil, and cisplatin in triple-negative breast cancer cell line, pancreatic cancer cell line and platinum-resistant pancreatic cancer cell line. Pol δ is not only involved in DNA replication, it is also a key component in many DNA repair pathways. Pol δ is the key enzyme responsible for D-loop extension during homologous recombination. Indeed, Zelpolib shows robust inhibition of homologous recombination repair of DNA double-strand breaks and induces "BRCAness" in HR-proficient cancer cells and enhances their sensitivity to PARP inhibitors.
Structure and cell cycle-regulated transcription of the human cyclin A gene. (1994)

Cyclin A is a cell cycle regulatory protein that functions in mitotic and S-phase control in mammalian somatic cells. Its deregulated expression may have a role in cellular transformation. We have cloned and sequenced the human cyclin A gene and cDNAs representing its mRNAs and have characterized its promoter. Using synchronized cultures of NIH 3T3 cells stably transfected with cyclin A promoter/luciferase constructs, we show that the promoter is repressed during the G1 phase of the cell cycle and is activated at S-phase entry. Cell cycle regulation of the cyclin A gene promoter is mediated by sequences extending from -79 to +100 relative to the predominant transcription start site. It does not require the presence of a functional retinoblastoma protein.
The two-dimensional optical CDMA using the novel balanced modified PN matrix codes (2004)

We propose an idea of using the balanced modified PN (mPN) matrix codes that enable to eliminate the multiple access interference (MAI) in the two-dimensional wavelength/time optical CDMA architecture. The CDMA system can be constructed with (M-I) MAI-free simultaneous users and 2(M-1) error-free simultaneous users.
Synthesis and properties of bioactive 2- and 3-amino-8-methyl-8H-quino[4,3,2-kl]acridine and 8,13-dimethyl-8H-quino[4,3,2-kl]acridinium saltsPart 15 in the series: Antitumour polycyclic acridines. See ref. 1. for part 14. (2004)

Cyclisation of 9-(benzotriazol-1-yl)acridine to the pentacycle 8H-quino[4,3,2-kl]acridine in a range of low-boiling solvents is mechanistically distinct from previously published photochemical (carbene) and thermolytic (radical) cyclisations. Fragmentation of the triazole ring of to a diazonium intermediate, and its subsequent heterolysis (-N(2)) and cyclisation is facilitated by solvation of intermediate zwitterionic species. Derivatives of 2- and 3-aminoquinoacridines methylated in the 8-position can be converted to 8,13-dimethylquino[4,3,2-kl]acridinium iodide salts with methyl iodide and were required for biological examination as potential telomerase inhibitors. The chloro group in 3-chloro-8-methyl-8H-quino[4,3,2-kl]acridine can be replaced efficiently by benzylamino, 4-morpholinyl and cyano substituents in palladium(0) mediated reactions.
Adaptive, programmable signal processing and filtering for hearing aids (1992)

Views Icon Views Article contents Figures & tables Video Audio Supplementary Data Peer Review Share Icon Share Twitter Facebook Reddit LinkedIn Tools Icon Tools Reprints and Permissions Cite Icon Cite Search Site Citation Malcolm J. Williamson, Kenneth L. Cummins, Kurt E. Hecox; Adaptive, programmable signal processing and filtering for hearing aids. J. Acoust. Soc. Am. 1 February 1992; 91 (2): 1194. https://doi.org/10.1121/1.402579 Download citation file: Ris (Zotero) Reference Manager EasyBib Bookends Mendeley Papers EndNote RefWorks BibTex toolbar search Search Dropdown Menu toolbar search search input Search input auto suggest filter your search All ContentAcoustical Society of AmericaThe Journal of the Acoustical Society of America Search Advanced Search |Citation Search
Comparative Secretome Analyses Using a Hollow Fiber Culture System with Label-Free Quantitative Proteomics Indicates the Influence of PARK7 on Cell Proliferation and Migration/Invasion in Lung Adenocarcinoma (2012)

As the leading cause of cancer death worldwide, lung cancer lacks effective diagnosis tools and treatments to prevent its metastasis. Fortunately, secretome has clinical usages as biomarkers and protein drugs. To discover the secretome that influences lung adenocarcinoma metastasis, the hollow fiber culture (HFC) system was used along with label-free proteomics approach to analyze cell secretomes between CL1-0 and CL1-5 cell lines, which exhibit low and high metastatic potentials. Among the 703 proteins quantified, 50 possessed different levels between CL1-0 and CL1-5. PARK7 was a primary focus because of the lack of research involving lung adenocarcinoma. The cell proliferation, migration, and invasion properties of CL1-0, CL1-5, and A549 cells were significantly diminished when the expression of their PARK7 proteins was reduced. Conversely, these functions were promoted when PARK7 was overexpressed in CL1-0. In clinical expression, PARK7 levels within tissue specimens and plasma samples were significantly higher in the cancer group. This represents the first time the HFC system has been used with label-free quantification to discern the elements of metastasis in lung adenocarcinoma cell secretomes. Likewise, PARK7 has never been researched for its role in promoting lung adenocarcinoma progression.
Polymer containing pendant tertiary alkyl amine groups useful in enhanced oil recovery using (1990)

This patent describes an improvement in a method for recovering oil from an underground oil-bearing earth formation penetrated by an injection well and a producing well, in which method carbon dioxide is injected into the formation to displace oil towards the producing well from which oil is produced to the surface. It comprises: injecting into the formation carbon dioxide, the viscosity of which is increased at least three-fold by the presence of a sufficient amount of a polymer containing pendant tertiary alkyl amine groups and a sufficient amount of a cosolvent to form a solution of the polymer in the carbon dioxide, wherein the minimum solubility parameter of the polymer is reduced to 6.85 (cal/cc)1/2 or less by control of the number of pendant tertiary alkyl amine groups and by the selection of the tertiary alkyl amine groups.
New Active Series of Growth Hormone Secretagogues (2003)

New growth hormone secretagogue (GHS) analogues were synthesized and evaluated for growth hormone releasing activity. This series derived from EP-51389 is based on a gem-diamino structure. Compounds that exhibited higher in vivo GH-releasing potency than hexarelin in rat (subcutaneous administration) were then tested per os in beagle dogs and for their binding affinity to human pituitary GHS receptors and to hGHS-R 1a. Compound 7 (JMV 1843, H-Aib-(d)-Trp-(d)-gTrp-formyl) showed high potency in these tests and was selected for clinical studies.(1)
The human PTH2 receptor: binding and signal transduction properties of the stably expressed recombinant receptor. (1996)

We have generated a series of stably transfected HEK-293 cell lines expressing the newly identified alternate human PTH receptor (hPTH2 receptor). This receptor subtype is selectively activated by N-terminal PTH-(1-34) and not the corresponding N-terminal (1-34) region of the functionally and structurally related hormone, PTH-related protein (PTHrP). A total of 20 distinct clones displaying different levels of PTH-responsive cAMP production were analyzed. None responded to PTHrP-(1-34). One of these clones (BP-16), displaying maximal PTH responsiveness, was chosen for more detailed evaluation. The BP-16 clone (and the parental HEK-293 cell line lacking both the hPTH/PTHrP receptor and the hPTH2 receptor) were examined for PTH binding, PTH-stimulated cAMP accumulation, PTH-stimulated changes in intracellular calcium ([Ca2+]i) levels, and hPTH2 receptor messenger RNA expression. In addition, we studied the photomediated cross-linking of a potent PTH agonist, namely [Nle8,18,Lys13 (epsilon-pBz2), 2-L-Nal23,Tyr34]bPTH(1-34)NH2 (K13), to the hPTH2 receptor on BP-16 cells. Photoaffinity cross-linking identified an approximately 90-kDa cell membrane component that was specifically competed by PTH-(1-34) and other receptor-interacting ligands. PTH-(1-34) and K13 are potent stimulators of both cAMP accumulation and increases in (Ca2+]i levels, and both bind to the hPTH2 receptor with high affinity (apparent Kd, 2.8 +/- 0.9 x 10(-8) and 8.5 +/- 1.7 x 10(-8) M, respectively). There was no apparent binding, cAMP-stimulating activity, or [Ca 2+]i signaling observed, nor was specific competition vs. binding of a PTH-(1-34) radioligand ([125I]PTH) with PTHrP-(1-34)NH2 found. PTHrP-(1-34) failed to inhibit cross-linking of the hPTH2 receptor by radiolabeled K13 ([125I]K13). However, effective competition vs. [125I]PTH and [125I]K13 binding and [125I]K13 cross-linking were observed with the potent PTH/PTHrP receptor antagonists, PTHrP-(7-34)NH2 and PTH-(7-34)NH2. PTHrP-(7-34)NH2 was shown to be a partial agonist that weakly stimulates both cAMP accumulation and increases in [Ca 2+]i levels in BP-16 cells. These data suggest that the hPTH2 receptor is distinct from the hPTH/PTHrP receptor in the structural features it requires for ligand binding in the family of PTH and PTHrP peptides.
Probing Bioluminescence Resonance Energy Transfer in Quantum Rod–Luciferase Nanoconjugates (2016)

We describe the necessary design criteria to create highly efficient energy transfer conjugates containing luciferase enzymes derived from Photinus pyralis (Ppy) and semiconductor quantum rods (QRs) with rod-in-rod (r/r) microstructure. By fine-tuning the synthetic conditions, CdSe/CdS r/r-QRs were prepared with two different emission colors and three different aspect ratios (l/w) each. These were hybridized with blue, green, and red emitting Ppy, leading to a number of new BRET nanoconjugates. Measurements of the emission BRET ratio (BR) indicate that the resulting energy transfer is highly dependent on QR energy accepting properties, which include absorption, quantum yield, and optical anisotropy, as well as its morphological and topological properties, such as aspect ratio and defect concentration. The highest BR was found using r/r-QRs with lower l/w that were conjugated with red Ppy, which may be activating one of the anisotropic CdSe core energy levels. The role QR surface defects play on Ppy binding, and energy transfer was studied by growth of gold nanoparticles at the defects, which indicated that each QR set has different sites. The Ppy binding at those sites is suggested by the observed BRET red-shift as a function of Ppy-to-QR loading (L), where the lowest L results in highest efficiency and furthest shift.
Short-pulse laser propagation through tissues (2003)

An experimental and numerical study is performed to analyze short pulse laser propagation through tissue phantoms without and with inhomogeneities / tumors imbedded in it. Short pulse laser probing techniques has distinct advantages over conventional very large pulse width or cw lasers primarily due to the additional information conveyed about the tissue interior by the temporal variation of the observed signal. Both the scattered temporal transmitted and reflected optical signals are measured experimentally using a streak camera for samples irradiated with a short pulse laser source. Parametric study involving different scattering and absorption coefficients of tissue phantoms and inhomogeneities as well as the detector position and orientation is performed. The temporal and spatial profiles of the scattered optical signals are compared with the numerical modeling results obtained by solving the transient radiative transport equation using discrete ordinates technique.
Reconstructing the profile of time-varying magnetic fields with quantum sensors (2013)

Quantum systems have shown great promise for precision metrology thanks to advances in their control. This has allowed not only the sensitive estimation of external parameters but also the reconstruction of their temporal profile. In particular, quantum control techniques and orthogonal function theory have been applied to the reconstruction of the complete profiles of time-varying magnetic fields. Here, we provide a detailed theoretical analysis of the reconstruction method based on the Walsh functions, highlighting the relationship between the orthonormal Walsh basis, sensitivity of field reconstructions, data compression techniques, and dynamical decoupling theory. Specifically, we show how properties of the Walsh basis and a detailed sensitivity analysis of the reconstruction protocol provide a method to characterize the error between the reconstructed and true fields. In addition, we prove various results about the negligibility function on binary sequences which lead to data compression techniques in the Walsh basis and a more resource-efficient reconstruction protocol. The negligibility proves a fruitful concept to unify the information content of Walsh functions and their dynamical decoupling power, which makes the reconstruction method robust against noise.
Using Spanning Graphs for Efficient Image Registration (2008)

We provide a detailed analysis of the use of minimal spanning graphs as an alignment method for registering multimodal images. This yields an efficient graph theoretic algorithm that, for the first time, jointly estimates both an alignment measure and a viable descent direction with respect to a parameterized class of spatial transformations. We also show how prior information about the interimage modality relationship from prealigned image pairs can be incorporated into the graph-based algorithm. A comparison of the graph theoretic alignment measure is provided with more traditional measures based on plug-in entropy estimators. This highlights previously unrecognized similarities between these two registration methods. Our analysis gives additional insight into the tradeoffs the graph-based algorithm is making and how these will manifest themselves in the registration algorithm's performance.
Depthwise Separable Convolutions for Neural Machine Translation (2017)

Depthwise separable convolutions reduce the number of parameters and computation used in convolutional operations while increasing representational efficiency. They have been shown to be successful in image classification models, both in obtaining better models than previously possible for a given parameter count (the Xception architecture) and considerably reducing the number of parameters required to perform at a given level (the MobileNets family of architectures). Recently, convolutional sequence-to-sequence networks have been applied to machine translation tasks with good results. In this work, we study how depthwise separable convolutions can be applied to neural machine translation. We introduce a new architecture inspired by Xception and ByteNet, called SliceNet, which enables a significant reduction of the parameter count and amount of computation needed to obtain results like ByteNet, and, with a similar parameter count, achieves new state-of-the-art results. In addition to showing that depthwise separable convolutions perform well for machine translation, we investigate the architectural changes that they enable: we observe that thanks to depthwise separability, we can increase the length of convolution windows, removing the need for filter dilation. We also introduce a new "super-separable" convolution operation that further reduces the number of parameters and computational cost for obtaining state-of-the-art results.
High power photonic-crystal surface-emitting lasers (2013)

We demonstrate the highest output power of 780 mW in single photonic crystal surface emitting lasers under continuous wave operation at room temperature. We also report the beam quality M <sup xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sup> = 1.1.
Bipolar mode static induction transistor (BSIT)&amp;#8212;High speed switching device (1978)

Junction type static induction transistor is designed as normally-off device, called as bipolar mode static induction transistor (BSIT), where the channel is completely pinched off by the gate to channel built-in voltage, resulting in an appearance of potential barrier in the channel. Basic properties of BSIT are discussed theoretically and experimentally. Possibilities of high current and high speed switching performance of BSIT has been demonstrated experimentally by using the sample having a cell size of 800 × 520 µm <sup xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sup> mounted in a high frequency package.
Identification of a recurrent transforming <i><scp>UBR5–ZNF423</scp></i> fusion gene in <scp>EBV</scp>‐associated nasopharyngeal carcinoma (2013)

Nasopharyngeal carcinoma (NPC) is a distinct type of head and neck cancer which is prevalent in southern China, south-east Asia and northern Africa. The development and stepwise progression of NPC involves accumulation of multiple gross genetic changes during the clonal expansion of Epstein-Barr virus (EBV)-infected nasopharyngeal epithelial cell population. Here, using paired-end whole-transcriptome sequencing, we discovered a number of chimeric fusion transcripts in a panel of EBV-positive tumour lines. Among these transcripts, a novel fusion of ubiquitin protein ligase E3 component n-recognin 5 (UBR5) on 8q22.3 and zinc finger protein 423 (ZNF423) on 16q12.1, identified from the NPC cell line C666-1, was recurrently detected in 12/144 (8.3%) of primary tumours. The fusion gene contains exon 1 of UBR5 and exons 7-9 of ZNF423 and produces a 94 amino acid chimeric protein including the original C-terminal EBF binding domain (ZF29-30) of ZNF423. Notably, the growth of NPC cells with UBR5-ZNF423 rearrangement is dependent on expression of this fusion protein. Knock-down of UBR5-ZNF423 by fusion-specific siRNA significantly inhibited the cell proliferation and colony-forming ability of C666-1 cells. The transforming ability of UBR5-ZNF423 fusion was also confirmed in NIH3T3 fibroblasts. Constitutive expression of UBR5-ZNF423 in NIH3T3 fibroblasts significantly enhanced its anchorage-independent growth in soft agar and induced tumour formation in a nude mouse model. These findings suggest that expression of UBR5-ZNF423 protein might contribute to the transformation of a subset of NPCs, possibly by altering the activity of EBFs (early B cell factors). Identification of the oncogenic UBR5-ZNF423 provides new potential opportunities for therapeutic intervention in NPC.