gebhart/patrepeval huggingface dataset:
SEMA-JOIN (2015)

Join is a powerful operator that combines records from two or more tables, which is of fundamental importance in the field of relational database. However, traditional join processing mostly relies on string equality comparisons. Given the growing demand for ad-hoc data analysis, we have seen an increasing number of scenarios where the desired join relationship is not equi-join. For example, in a spreadsheet environment, a user may want to join one table with a subject column country-name, with another table with a subject column country-code. Traditional equi-join cannot handle such joins automatically, and the user typically has to manually find an intermediate mapping table in order to perform the desired join. We develop a SEMA-JOIN approach that is a first step toward allowing users to perform semantic join automatically, with a click of the button. Our main idea is to utilize a data-driven method that leverages a big table corpus with over 100 million tables to determine statistical correlation between cell values at both row-level and column-level. We use the intuition that the correct join mapping is the one that maximizes aggregate pairwise correlation, to formulate the join prediction problem as an optimization problem. We develop a linear program relaxation and a rounding argument to obtain a 2-approximation algorithm in polynomial time. Our evaluation using both public tables from the Web and proprietary Enterprise tables from a large company shows that the proposed approach can perform automatic semantic joins with high precision for a variety of common join scenarios.
End-to-End Multi-Person Audio/Visual Automatic Speech Recognition (2022)

Traditionally, audio-visual automatic speech recognition has been studied under the assumption that the speaking face on the visual signal is the face matching the audio. However, in a more realistic setting, when multiple faces are potentially on screen one needs to decide which face to feed to the A/V ASR system. The present work takes the recent progress of A/V ASR one step further and considers the scenario where multiple people are simultaneously on screen (multi-person A/V ASR). We propose a fully differentiable A/V ASR model that is able to handle multiple face tracks in a video. Instead of relying on two separate models for speaker face selection and audio-visual ASR on a single face track, we introduce an attention layer to the ASR encoder that is able to soft-select the appropriate face video track. Experiments carried out on an A/V system trained on over 30k hours of YouTube videos illustrate that the proposed approach can automatically select the proper face tracks with minor WER degradation compared to an oracle selection of the speaking face while still showing benefits of employing the visual signal instead of the audio alone.
Water and DMSO membrane permeability characteristics of in-vivo- and in- vitro-derived and cultured murine oocytes and embryos (1998)

Although embryo cryopreservation is routine for many mammalian species, it is important to know how the fundamental cryobiology of these cells changes with development. Progressive cleavage divisions result in a reduction in the blastomere surface area available for water and cryoprotectant mass transport. Therefore, the membrane permeability of murine oocytes, zygotes, 2-cell, 4-cell, and 8-cell embryos to water (Lp), and dimethylsulphoxide (PDMSO), and the reflection coefficient, sigma (sigma) were determined. Oocytes or zygotes were recovered, cumulus cells removed, then cultured until use. Oocytes and embryos were immobilized and perfused with treatment solutions at 24 degrees C. Osmotically induced cell volume changes over time were videotaped followed by image analysis. The Lp values in the presence of dimethylsulphoxide (DMSO) were 0.77, 0.81, 0.94, 0.86, and 1.10 microm/min/atm, and the PDMSO values were 1.85, 2.04, 2.41, 1.95, and 1.25x10(-3) cm/min for oocytes, zygotes, 2, 4, and 8-cell embryos respectively. The Lp values in the presence of DMSO were significantly (P < 0.05) higher than those in the absence of DMSO. Treating the whole embryo as a single osmotic entity leads to significantly (P < 0.05) elevated PDMSO estimates relative to those based upon measurements of individual blastomeres. These data indicate that both Lp and PDMSO estimates are lower when predicted on an individual blastomere basis. The data also show that neither Lp nor PDMSO differ among oocytes, zygotes, 2-cell and 4-cell embryos. However, the significantly higher Lp and lower PDMSO of the 8-cell stage support the hypothesis that fundamental cryobiological differences may require developmental stage-specific embryo cryopreservation protocols.
Orally Active Epoxyeicosatrienoic Acid Analogs (2017)

Biologically active epoxyeicosatrienoic acid (EET) regioisomers are synthesized from arachidonic acid by cytochrome P450 epoxygenases of endothelial, myocardial, and renal tubular cells. EETs relax vascular smooth muscle and decrease inflammatory cell adhesion and cytokine release. Renal EETs promote sodium excretion and vasodilation to decrease hypertension. Cardiac EETs reduce infarct size after ischemia-reperfusion injury and decrease fibrosis and inflammation in heart failure. In diabetes, EETs improve insulin sensitivity, increase glucose tolerance, and reduce the renal injury. These actions of EETs emphasize their therapeutic potential. To minimize metabolic inactivation, 14,15-EET agonist analogs with stable epoxide bioisosteres and carboxyl surrogates were developed. In preclinical rat models, a subset of agonist analogs, termed EET-A, EET-B, and EET-C22, are orally active with good pharmacokinetic properties. These orally active EET agonists lower blood pressure and reduce cardiac and renal injury in spontaneous and angiotensin hypertension. Other beneficial cardiovascular actions include improved endothelial function and cardiac antiremodeling actions. In rats, EET analogs effectively combat acute and chronic kidney disease including drug- and radiation-induced kidney damage, hypertension and cardiorenal syndrome kidney damage, and metabolic syndrome and diabetes nephropathy. The compelling preclinical efficacy supports the prospect of advancing EET analogs to human clinical trials for kidney and cardiovascular diseases.
Noninvasive Estimation of Pressure Changes Using 2-D Vector Velocity Ultrasound: An Experimental Study With <italic>In Vivo</italic> Examples (2018)

A noninvasive method for estimating intravascular pressure changes using 2-D vector velocity is presented. The method was first validated on computational fluid dynamic (CFD) data and with catheter measurements on phantoms. Hereafter, the method was tested in vivo at the carotid bifurcation and at the aortic valve of two healthy volunteers. Ultrasound measurements were performed using the experimental scanner SARUS, in combination with an 8 MHz linear array transducer for experimental scans and a carotid scan, whereas a 3.5-MHz phased array probe was employed for a scan of an aortic valve. Measured 2-D fields of angle-independent vector velocities were obtained using synthetic aperture imaging. Pressure drops from simulated steady flow through six vessel geometries spanning different degrees of diameter narrowing, running from 20%-70%, showed relative biases from 0.35% to 12.06%, depending on the degree of constriction. Phantom measurements were performed on a vessel with the same geometry as the 70% constricted CFD model. The derived pressure drops were compared to pressure drops measured by a clinically used 4F catheter and to a finite-element model. The proposed method showed peak systolic pressure drops of -3 kPa ± 57 Pa, while the catheter and the simulation model showed -5.4 kPa ± 52 Pa and -2.9 kPa, respectively. An in vivo acquisition of 10 s was made at the carotid bifurcation. This produced eight cardiac cycles from where pressure gradients of -227 ± 15 Pa were found. Finally, the aortic valve measurement showed a peak pressure drop of -2.1 kPa over one cardiac cycle. In conclusion, pressure gradients from convective flow changes are detectable using 2-D vector velocity ultrasound.
Evaluation of parameter risk via first order approximation of distortion risk measures (2010)

In this paper we address the issue of parameter risk in the loss distribution approach to operational risk management. When the risk measure belongs to the class of distortion risk measures and the asymptotic distribution of the estimate of the parameters is normal, we use a linearization of the risk measure to examine how parameter changes can be mapped into corresponding risk measure changes. With this methodology, it is possible to approximate the confidence interval for the risk measure estimate associated with parameter uncertainty. We discuss computation time of these estimates, which we have found to be very reasonable. Examples are given for some common risk measures, including value-at-risk and conditional value-at-risk.
A Fluorescent Sensor of the Phosphorylation State of Nucleoside Diphosphate Kinase and Its Use To Monitor Nucleoside Diphosphate Concentrations in Real Time (2001)

A sensor for purine nucleoside diphosphates in solution based on nucleoside diphosphate kinase (NDPK) has been developed. A single cysteine was introduced into the protein and labeled with the environmentally sensitive fluorophore, N-[2-(iodoacetamido)ethyl]-7-diethylaminocoumarin-3-carboxamide. The resultant molecule shows a 4-fold fluorescence increase when phosphorylated on His117; this phosphorylation is on the normal reaction pathway of the enzyme. The emission maximum of the phosphoenzyme is at 475 nm, with maximum excitation at 430 nm. The fluorescent phosphorylated NDPK is used to measure the amount of ADP and the unphosphorylated to measure ATP. The labeled protein is phosphorylated to > 90%, and the resultant molecule is stable on ice or can be stored at -80 degrees C. The fluorescence responds to the fraction of protein phosphorylated and so to the equilibrium between ADP plus NDPK approximately P and ATP plus NDPK. In effect, the sensor measures the ADP/ATP concentration ratio. The enzyme has a broad specificity for the purine of the nucleotides, so the sensor also can measure GDP/GTP ratios. The fluorescence and kinetic properties of the labeled protein are described. The binding rate constants of nucleotides are approximately 10(5) M(-1) s(-1), and the fluorescence change is at >200 s(-1) when the ADP concentration is >1 mM. Results are presented with two well-defined systems, namely, the kinetics of ADP release from myosin subfragment 1 and GDP release from the small G protein, human rho. The results obtained with this novel sensor agree with those from alternate methods and demonstrate the applicability for following micromolar changes in nucleoside diphosphate in real time.
Cloning and functional analysis of a cDNA encoding a novel 139 kDa starch synthase from potato (<i>Solanum tuberosum</i> L.) (1996)

Three isoforms of starch synthase were shown to be present in soluble potato tuber extracts by activity staining after native gel electrophoresis. An antibody directed against a domain conserved in starch synthases was used to clone a cDNA for one of these isoforms by screening a tuber-specific expression library. A partial cDNA of 2.6 kbp was obtained and used to isolate a full-length cDNA of 4167 bp. The deduced amino acid sequence identifies the protein as a novel type of starch synthase from potato with a molecular mass of 139.2 kDa for the immature enzyme including its transit peptide. This novel isoform was designated SS III. An analysis of the expression pattern of the gene indicates that SS III is equally expressed in tubers of different developmental stages as well as in sink and source leaves. In several independent transgenic potato lines, where the expression of SS III was repressed using the antisense approach, the activity of a specific starch synthase isoform was reduced to non-detectable levels as determined through activity staining after native gel electrophoresis. The reduction of this isoform of starch synthase leads to the synthesis of a structurally modified starch in the transgenic plants: there is a drastic change in granule morphology and an increased level of covalently linked phosphate.
Drilling Expert System for the Optimal Design and Execution of Successful Cementing Practices (2010)

Abstract Cementing is an important factor in drilling and completion operations. Good cementing practices are required for a proper advancing in drilling and production operations. Successful cementing practices start with the design of effective cement slurries. However, to the best of the authors’ knowledge, there are no standard guidelines to help drilling engineers and scientists in the effective design of optimal cement slurries to be used in different well sections. The objective of this paper is to propose a set of guidelines for the optimal design of cement slurries, by integrating current best practices through a decision-making system based on Artificial Bayesian Intelligence. Best cementing practices collected from data, models, and experts’ opinions, are integrated into a Bayesian Network BN to simulate likely scenarios of its use, that will honor efficient designs when dictated by varying well objectives, well types, temperatures, pressures, and, drilling fluids. The proposed decision-making model follows a causal and an uncertainty-based approach capable of simulating realistic conditions on the use of cement slurries during drilling and completion operations. For instance, well sections and drilling operations dictate the use of the proper cement design which may include the use of specific additives according to the particular modeling scenarios. These include operations on surface casing, top jobs, intermediate casings, cementing in weak formations, squeeze treatment, kickoff and isolation plugs, horizontal, and vertical completions, among others. Potential operational problems that can lead to cementing failures are also discussed. Different methods of investigation and recommendations are presented in detail.
New properties of sigma-delta modulators with DC inputs (1992)

New properties of single- and double-loop sigma-delta modulators with constant inputs are derived by exploiting the inherent structure os the output sequences or codewords that the modulators are capable of producing. Upper bounds are derived on the number of N-bit codewords for the single- and double-loop modulators. Analytical lower bounds on the mean squared error (MSE) obtainable by any decoder, linear or nonlinear, in approximating the constant input are also derived. Optimal nonlinear decoders for constant inputs based on a table lookup approach which operates directly on the nonuniform quantization intervals are considered. Using simulations is is found that the optimal nonlinear decoders perform better than linear decoders, by about 3 and 20 dB for the single- and double-loop modulators, respectively. A cascade structure specifically for constant inputs is introduced, and its corresponding decoding algorithm is derived. It is shown that for a fixed latency, the MSE performance of the cascade structure is 12 dB superior, and its throughput is twice that of the conventional two-stage MASH modulator.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">></ETX>
Electric Circuit Model for Aerodynamic Plasma Actuator (2006)

The aerodynamic plasma actuator has shown considerable promise as a o w control device in dieren t applications. It has been shown previously that the lumped-element circuit model correctly describes the behavior of the aerodynamic plasma actuator. To incorporate this model into the Navier-Stokes solver, it was modied to include the spatial distribution of the discharge within the plasma. To model the behavior of the single dielectric barrier discharge aerodynamic plasma actuator, we represent it as a network of electric circuit elements. The electric circuit consists of N elementary subcircuits, each representing a small physical domain with nite width and length. Each subcircuit consists of the air capacitor, dielectric capacitor, plasma resistive element, and diodes which govern the presence of the plasma. The results of the simulation are compared to the experimental data of the plasma spatial distribution obtained with a photomultiplier tube.
Beamforming techniques for ultrasound microcalcification detection (2014)

Evaluation of microcalcifications helps early detection of breast cancer and classification of benign and malignant masses. Though ultrasound is a proven adjunct to mammography, especially in dense breast tissue, its sensitivity to microcalcifications is usually poor. To enable early ultrasound-based cancer detection in dense breast, the sensitivity has to be improved. Here we report beamforming techniques for imaging microcalcifications. The strategy is to involve channel-data-based parameters that favor point/sub-resolution targets, which microcalcifications resemble acoustically. Accordingly, we have devised algorithms based on coherence factor and dominance of the first eigenvalue of covariance matrices. The two parameters are used to derive a binary microcalcification map. The initial results based on in vivo and phantom data show potential of the proposed techniques for microcalcification detection.
Variation correction algorithm: Analysis of phase suppression and thermal profile fidelity for proton resonance frequency magnetic resonance thermometry at 0.2 T (2003)

The results suggest that thermal profiles can be accurately reconstructed at 0.2 T using the VCA, even in the presence of over 1 ppm spatially and temporally dependent field drift over a 1-hour time frame.
Terahertz imaging using an interferometric array (2005)

It has been suggested that interferometric/ synthetic aperture imaging techniques, when applied to the THz regime, can provide sufficient imaging resolution and spectral content to detect concealed explosives and other weapons from a standoff distance. The interferometric imaging method is demonstrated using CW THz generation and detection. Using this hardware, the reconstruction of THz images from a point source is emphasized and compared to theoretical predictions.
In-situ activation of CuO/ZnO/Al.sub.2 O.sub.3 catalysts in the liquid phase (1989)

The present invention relates to a method of activation of a CuO/ZnO/Al.sub.2 O.sub.3 catalyst slurried in a chemically inert liquid. Successful activation of the catalyst requires the use of a process in which the temperature of the system at any time is not allowed to exceed a certain critical value, which is a function of the specific hydrogen uptake of the catalyst at that same time. This process is especially critical for activating highly concentrated catalyst slurries, typically 25 to 50 wt %. Activation of slurries of CuO/ZnO/Al.sub.2 O.sub.3 catalyst is useful in carrying out the liquid phase methanol or the liquid phase shift reactions.
A 2-ns cycle, 3.8-ns access 512-kb CMOS ECL SRAM with a fully pipelined architecture (1991)

The authors describe a 512 K CMOS static RAM (SRAM) with emitter-coupled-logic (ECL) interfaces which has a 2-ns cycle time and a 3.8-ns access time, both of which are valid for random READ/WRITE operations. The CMOS technology and the physical organization of the chip are briefly discussed, and the pipelined architecture of the chip is described. Detailed measurements of internal chip waveforms demonstrating 2-ns cycle time operation are presented. The impact of wire RC delays on performance is discussed. Circuit examples that demonstrate the implementation of the pipelined architecture are included. Measurements of operating margins, access time, and cycle time are outlined.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">></ETX>
Construction of isogenic urease-negative mutants of Helicobacter pylori by allelic exchange (1992)

Isogenic urease-negative mutants of Helicobacter pylori were constructed by allelic replacement. A region of cloned H. pylori DNA containing the structural urease genes (ureA and ureB) was disrupted by insertion of a mini-Tn3-Km transposon. Electrotransformation of H. pylori cells with kanamycin-ureB-disrupted derivative plasmids resulted in isolation of kanamycin-resistant H. pylori transformants. Competence for electrotransformation appeared to be restricted to certain wild-type H. pylori isolates; only 1 isolate (of 10 tested) was consistently transformed. Two of the kanamycin-resistant H. pylori transformants were further studied and shown to be urease negative. Southern hybridization analyses demonstrated that the urease-negative mutants had been constructed by allelic exchange involving simultaneous replacement of the ureB gene with the kanamycin-ureB-disrupted copy and loss of the vector. Immunoblot studies of whole-cell extracts of the isogenic ureB mutants with anti-H. pylori sera indicated the absence of a polypeptide with an apparent molecular mass of 61 kDa; thus, the mutants no longer synthesized the UreB product. Generation of stable, genetically engineered urease mutants of H. pylori will be useful for addressing the role of urease in the pathogenesis of H. pylori infection.
Use of Hydrogels to Vaccinate Calves Orally for Pneumonic Pasteurellosis (1992)

This study showed that hydrogels can deliver antigens orally to ruminants resulting in immunity at distant mucosal sites. Studies are underway to determine what other antigens can be loaded into hydrogels and retain their immunogenicity when released into the lower GIT. Hydrogels provide a practical, safe, economical way to deliver oral vaccines to a large number of animals to prevent diseases which begin at a mucosal surface.
Endothelin‐converting enzymes (1992)

The putative endothelin-converting enzyme (ECE) has been the focus of intense research, both within academia and the pharmaceutical industry. Interest in ECE stems mainly from the hypothesis that development of inhibitors of ECE will provide an effective means of preventing production of endothelin in circumstances where it may play a pathogenic role. Both an aspartic and a metalloprotease have been identified that have characteristics of this putative enzyme. Evidence suggests that the metalloprotease, which is inhibited by phosphoramidon, may be the physiologically relevant converting enzyme. However, it remains to be demonstrated conclusively that any inhibitor of an ECE activity directly alters endogenous endothelin production and/or the pathogenesis of a disease condition in which endothelin is thought to play a primary role.
A comparative study on attributed relational gra matching algorithms for perceptual 3-D shape descriptor in MPEG-7 (2004)

Nowadays, the demand on user-friendly querying interface such as query-by-sketch and query-by-editing is an important issue in the content-based retrieval system for 3-D object database. Especially in MPEG-7, P3DS (Perceptual 3-D Shape) descriptor has been developed in order to provide the user-friendly querying, which can not be covered by an existing international standard for description and browsing of 3-D object database. Since the P3DS descriptor is based on the part-based representation of 3-D object, it is a kind of attributed relational gra (ARG) so that the ARG matching algorithm naturally follows as the core procedure for the similarity matching of the P3DS descriptor. In this paper, given a P3DS database from the corresponding 3-D object database, we bring focus into investigating the pros and cons of the target ARG matching algorithms. In order to demonstrate the objective evidence of our conclusion, we have conducted the experiments based on the database of 480 3-D objects with 33 categories in terms of the bull's eye performance, average normalized modified retrieval rate, and precision/recall curve.