gebhart/patrepeval huggingface dataset:
Fast detection of tobacco mosaic virus infected tobacco using laser-induced breakdown spectroscopy (2017)

Tobacco mosaic virus (TMV) is one of the most devastating viruses to crops, which can cause severe production loss and affect the quality of products. In this study, we have proposed a novel approach to discriminate TMV-infected tobacco based on laser-induced breakdown spectroscopy (LIBS). Two different kinds of tobacco samples (fresh leaves and dried leaf pellets) were collected for spectral acquisition, and partial least squared discrimination analysis (PLS-DA) was used to establish classification models based on full spectrum and observed emission lines. The influences of moisture content on spectral profile, signal stability and plasma parameters (temperature and electron density) were also analysed. The results revealed that moisture content in fresh tobacco leaves would worsen the stability of analysis, and have a detrimental effect on the classification results. Good classification results were achieved based on the data from both full spectrum and observed emission lines of dried leaves, approaching 97.2% and 88.9% in the prediction set, respectively. In addition, support vector machine (SVM) could improve the classification results and eliminate influences of moisture content. The preliminary results indicate that LIBS coupled with chemometrics could provide a fast, efficient and low-cost approach for TMV-infected disease detection in tobacco leaves.
Full duplex transmission operation of a 2.45-GHz asynchronous spread spectrum using a SAN convolver (1993)

An asynchronous spread spectrum (SS) modem in the 2.45-GHz band has been implemented using an efficient ZnO-SiO(2)-Si surface acoustic wave (SAW) convolver. The modem, which can operate under full duplex transmission is based on a direct-sequence/code-shift-keying (DS/CSK) method for the modulation. Pseudonoise (PN) codes are chosen from a preferred pair of m-sequences of period 127, and the code rate is 14 MHz. The demodulation is carried out asynchronously, utilizing the coherent correlation characteristics of the SAW convolver. The main interference caused by a transmitted signal in the modem itself is effectively reduced by an RF isolator and the SS process gain. Adequate self-jamming rejection capability has been confirmed; a bit error rate of 10(-6) is observed at -78.3 dB of a desired-to-undesired-signal ratio using an artificial transmission line.
Suppression and restoration of male fertility using a transcription factor (2007)

The Arabidopsis AtMYB103 gene codes for an R2R3 MYB domain protein whose expression is restricted to the tapetum of developing anthers and to trichomes. Down-regulation of expression using anti-sense leads to abnormal tapetum and pollen development, although seed setting still occurs (Higginson, T., Li, S.F. and Parish, R.W. (2003) AtMYB103 regulates tapetum and trichome development in Arabidopsis thaliana. Plant J. 35, 177-192). In this study, we show that blocking the function of the AtMYB103 gene, employing either an insertion mutant or an AtMYB103EAR chimeric repressor construct under the control of the AtMYB103 promoter, results in complete male sterility and failure to set seed. These plants exhibit similar abnormalities in tapetum and pollen development, with the tapetum becoming highly vacuolated at early stages and degenerating prematurely. No exine is deposited on to the pollen wall. The degeneration of pollen grains commences prior to pollen mitosis, the pollen collapsing and largely lacking cytoplasmic content. A restorer containing the AtMYB103 gene under the control of a stronger anther-specific promoter was introduced into pollen donor plants and crossed into the male sterile plants transgenic for the repressor. The male fertility of F1 plants was restored. The chimeric repressor and the restorer constitute a reversible male sterility system which could be adapted for hybrid seed production. This is the first reversible male sterility system targeting a transcription factor essential for pollen development. Strategies for generating inducible male sterility and maintainable male sterility for the production of hybrid crops are discussed.
A Study to Assess the Effect of Asphalt Mixture on the Photocatalytic Performance: A Simulation (2018)

This study reports the simulation of a photocatalytic system process and the photocatalytic property of self-cleaning asphalt concrete (SCAC) with four typical asphalt mixtures. A photocatalytic system was simulated based on the pollutant concentration data, which were collected on three types of city roads. Two photocatalytic indexes were proposed to evaluate the photocatalytic property of self-cleaning asphalt concrete: relative decomposition rate and degradation capacity. Four typical asphalt mixtures were prepared with SBS/TiO<sub>2</sub> modified bitumen: AC-13a asphalt mixture (AC-13a), AC-13b asphalt mixture (AC-13b), open-graded fraction courses (OGFC), and porous asphalt concrete (PAC). The performance of the SCAC samples was investigated using the cracking resistance, rutting resistance, and moisture susceptibility. The results show that the degradation capacity of CO is approximately 20 times more than that of HC and CO . The air voids of SCAC, which is exposed to ultraviolet rays, contribute to the photocatalytic indexes in the simulated system in this study. In addition, the SBS /TiO<sub>2</sub> modified bitumen does not improve the high- or low-temperature property and water stability of SCAC.
14.3 A 43pJ/Cycle Non-Volatile Microcontroller with 4.7μs Shutdown/Wake-up Integrating 2.3-bit/Cell Resistive RAM and Resilience Techniques (2019)

Non-volatility is emerging as an essential on-chip memory characteristic across a wide range of application domains, from edge nodes for the Internet of Things (IoT) to large computing clusters. On-chip non-volatile memory (NVM) is critical for low-energy operation, real-time responses, privacy and security, operation in unpredictable environments, and fault-tolerance [1]. Existing on-chip NVMs (e.g., Flash, FRAM, EEPROM) suffer from high read/write energy/latency, density, and integration challenges [1]. For example, an ideal IoT edge system would employ fine-grained temporal power gating (i.e., shutdown) between active modes. However, existing on-chip Flash can have long latencies (> 23 ms latency for erase followed by write), while inter-sample arrival times can be short (e.g., 2ms in [2]).
Controlled Synthesis of Sb<sub>2</sub>(S<sub>1–<i>x</i></sub>Se<sub><i>x</i></sub>)<sub>3</sub> (0 ≤ <i>x</i> ≤ 1) Solid Solution and the Effect of Composition Variation on Electrocatalytic Energy Conversion and Storage (2020)

Solid solutions provide better control over optical and electronic properties of a material as a function of the composition. However, to achieve precise control over stoichiometry, carefully designed precursors with comparable reactivity are required. We have used the molecular precursor route to prepare Sb2(S1–xSex)3 (0 ≤ x ≤ 1) solid solution over an entire range. The p-XRD analysis confirms the formation of a solid solution, and EDX analysis shows a uniform distribution of all elements in the synthesized samples. Morphology examination by SEM and TEM analysis indicates crystal splitting in all the samples. Raman analysis confirms the absence of phase segregation, and UV–vis–NIR analysis shows a gradual change in the band gap as a function of composition. The electrocatalytic behavior of the samples for energy generation and energy storage was also examined. For hydrogen evolution reaction, the selenium-enriched sample with a small amount of sulfur showed the lowest overpotential of 210 mV at a current density of 10 mA/cm2. Similar behavior was observed for charge storage performance where the sample with similar composition showed the highest specific capacitance of 290 F/g.
The Lowe syndrome protein OCRL1 is involved in primary cilia assembly (2012)

Lowe syndrome (LS) is a devastating, X-linked genetic disease characterized by the presence of congenital cataracts, profound learning disabilities and renal dysfunction. Unfortunately, children affected with LS often die early of health complications including renal failure. Although this syndrome was first described in the early 1950s and the affected gene, OCRL1, was identified more than 17 years ago, the mechanism by which Ocrl1 defects lead to LS's symptoms remains unknown. Here we show that LS display characteristics of a ciliopathy. Specifically, we found that patients' cells have defects in the assembly of primary cilia and this phenotype was reproduced in cell lines by knock-down of Ocrl1. Importantly, this defect could be rescued by re-introduction of WT Ocrl1 in both patient and Ocrl1 knock-down cells. In addition, a zebrafish animal model of LS exhibited cilia defects and multiple morphological and anatomical abnormalities typically seen in ciliopathies. Mechanistically, we show that Ocrl1 is involved in protein trafficking to the primary cilia in an Rab8-and IPIP27/Ses-dependent manner. Taking into consideration the relevance of the signaling pathways hosted by the primary cilium, our results suggest hitherto unrecognized mechanisms by which Ocrl1 deficiency may contribute to the phenotypic characteristics of LS. This conceptual change in our understanding of the disease etiology may provide an alternative avenue for the development of therapies.
Polyurethane/ground tire rubber composite foams based on polyglycerol: Processing, mechanical and thermal properties (2015)

During the synthesis of rigid polyurethane foams, petrochemical polyol was substituted with polyglycerol, the product of thermo-catalytic polycondensation of waste glycerol, resulting from biodiesel production. Two types of ground tire rubbers, untreated and thermo-mechanically reclaimed, were used to obtain “green” polyurethane-polyglycerol composite foams. Samples were prepared by a single-step method for the ratio of NCO/OH groups equal to 2. Foams containing different types of fillers showed noticeably various appearances, which suggested significant differences in the matrix–filler interactions between materials modified with untreated and reclaimed ground tire rubber. Addition of rubber particles shortened the processing time by more than 20 s and reduced the temperature during synthesis. Incorporation of ground tire rubber increased the size of the cells in comparison to unmodified foam. Modifications of rigid polyurethane foams resulted in the increase of apparent density and compressive strength even by 40% compared to neat foam. Enhancement was stronger for samples containing thermo-mechanically reclaimed ground tire rubber as a result of better developed surface of filler particles and their interfacial interactions with polyurethane matrix. Prepared polyurethane foams filled with untreated rubber particles also showed slightly enhanced thermal stability compared to neat foam.
Producing timely recommendations from social networks through targeted search (2009)

There has been a significant increase in interest and participation in social networking websites recently. For many users, social networks are indispensable tools for sharing personal information and keeping abreast with updates by their acquaintances. While there has been research on understanding the structure and effects of social networks, research on using social networks for developing targeted referral systems are few even though this can be valuable because of the abundance of information about user preferences, activities and choices. The goal of this research is to develop agent-based referral systems that learn user preferences based on past rating activities and caters to an individual user's interests by selectively searching the contributions posted by other users in close proximity in this user's social network. In particular, we are interested in fast notification of relevant activities in the social network that will enhance user awareness, satisfaction, and currency. In this paper, we propose keeping different trust values for a friend on different topics of interest and emphasize its importance with empirical results. We have developed an online photo referral system that identifies photos of possible interest to a user based on meta-data and comments on the pages of linked users on a popular photo sharing social website (flickr.com). We develop a probabilistic category determination mechanism that allows us to identify the possible categories an item belongs to by examining its tags. We use comments as an indirect measure of user preference for a photo. Empirical results show that our Social Network-based Item Recommendation (SNIR) system outperforms a content-based approach as well as the current recommendation schemes.
Immunization with the Recombinant PorB Outer Membrane Protein Induces a Bactericidal Immune Response against <i>Neisseria meningitidis</i> (2002)

Infections with Neisseria meningitidis are characterized by life-threatening meningitis and septicemia. The meningococcal porin proteins from serogroup B meningococci have been identified as candidates for inclusion in vaccines to prevent such infections. In this study, we investigated the vaccine potential of the PorB porin protein free of other meningococcal components. The porB gene from a strain of Neisseria meningitidis expressing the class 3 outer membrane porin protein (PorB3) was cloned into the pRSETB vector, and the protein was expressed at high levels in a heterologous host Escherichia coli. The recombinant protein was purified to homogeneity by affinity chromatography and used for immunization after incorporation into liposomes and into micelles composed either of zwitterionic detergent or nondetergent sulfobetaine. The immunogenicity of these preparations was compared to recombinant PorB protein adsorbed to Al(OH)(3) adjuvant as a control. Although sera raised against the protein adsorbed to Al(OH)(3) reacted with the purified recombinant protein, sera raised against liposomes and micelles showed greater activity with native protein, as measured by enzyme immunoassay with outer membranes and by whole-cell immunofluorescence. Reactivity with native protein was considerably enhanced by incorporation of the adjuvant monophosphoryl lipid A into the liposome or micelle preparations. Recognition of the native protein was in a serotype-specific manner and was associated with the ability of the antisera to promote high levels of serotype-specific complement-mediated killing of meningococci. These results demonstrate that the PorB protein should be considered as a component of a vaccine designed to prevent serogroup B meningococcal infection.
Ion/Neutral, Ion/Electron, Ion/Photon, and Ion/Ion Interactions in Tandem Mass Spectrometry: Do We Need Them All? Are They Enough? (2011)

A range of strategies and tools have been developed to facilitate the determination of primary structures of analyte molecules of interest via tandem mass spectrometry (MS/MS). The two main factors that determine the primary structural information present in an MS/MS spectrum are the type of ion generated from the analyte molecule and the dissociation method. The ion type subjected to dissociation is determined by the ionization method/conditions and ion transformation processes that might take place after initial gas-phase ion formation. Furthermore, the range of analyte-related ion types can be expanded via derivatization reactions prior to mass spectrometry. Dissociation methods include those that simply alter the population of internal states of the mass-selected ion (i.e., activation methods like collision-induced dissociation) as well as processes that rely on the transformation of the ion type prior to dissociation (e.g., electron capture dissociation). A variety of ion interactions have been studied for the purpose of ion dissociation and ion transformation, including ion/neutral, ion/photon, ion/electron, and ion/ion interactions. A wide range of phenomena have been observed, many of which have been explored/developed as means for structural analysis. The techniques arising from these phenomena are discussed within the context of the elements of structural determination in tandem mass spectrometry: ion-type definition and dissociation. Unique aspects of the various ion interactions are emphasized along with any barriers to widespread implementation.
Frightened by Links (2009)

This article describes a recent attack trend called clickjacking, which exploits hyperlinks as the attack vehicle. This article introduces the reader to the attack concept and to the possible ways to implement it, by means of some practical example. Then it discusses the detectability of such an attack and some possible countermeasures.
ATM adaptation layer protocol (1994)

The ATM adaptation layer (AAL), as defined in the International Telecommunications Union (ITU) 1990 recommendations, will enhance the services provided by the ATM layer to support the functions required by the next higher layer. The question of what that next higher layer is has been a matter of controversy from the beginning of the AAL study. AAL protocol specifications are key to the success of B-ISDN services. They must be developed in a timely fashion, in cooperation with other standardization bodies such as ISO and the ATM Forum.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">></ETX>
Distributed Xbean applications (2002)

XML has emerged as the universal standard for exchanging and externalizing data. Software products of all kinds are being upgraded to "support XML". Typically this means they can import and export XML data. But just defining standard representations for exchanging data is insufficient. The data need to be integrated with existing applications and databases and processed by programs written in some programming language. The paper describes distributed applications constructed from Xbeans. Xbeans are Java Beans that manipulate XML data. With the appropriate set of Xbeans and a Java Bean design tool, it is possible to build useful distributed applications with little or no programming.
High-efficiency neutron detectors and methods of making same (2023)

Neutron detectors, advanced detector process techniques and advanced compound film designs have greatly increased neutron-detection efficiency. One embodiment of the detectors utilizes a semiconductor wafer with a matrix of spaced cavities filled with one or more types of neutron reactive material such as <sup>10</sup>B or <sup>6</sup>LiF. The cavities are etched into both the front and back surfaces of the device such that the cavities from one side surround the cavities from the other side. The cavities may be etched via holes or etched slots or trenches. In another embodiment, the cavities are different-sized and the smaller cavities extend into the wafer from the lower surfaces of the larger cavities. In a third embodiment, multiple layers of different neutron-responsive material are formed on one or more sides of the wafer. The new devices operate at room temperature, are compact, rugged, and reliable in design.
Probabilistic and Bottle-Neck Features for LVCSR of Meetings (2007)

In recent years, probabilistic features became an integral part of state-of-the-are LVCSR systems. In this work, we are exploring the possibility of obtaining the features directly from neural net without the necessity of converting output probabilities to features suitable for subsequent GMM-HMM system. We experimented with 5-layer MLP with bottle-neck in the middle layer. After training such a neural net, we used outputs of the bottle-neck as features for GMM-HMM recognition system. The benefits are twofold: first, improvement was gained when these features are used instead of the probabilistic features, second, the size of the system was reduced, as only part of the neural net is used. The experiments were performed on meetings recognition task defined in MST RT'05 evaluation.
Crop Protection: Why and How (2007)

The answer to the question 'why' has proximate and ultimate roots. The proximate answer, 'pests take our harvest', compels one to act. Crops and their pests are products of domestication, the ancestors of the pests still exist in nature. Eradication is impossible and undesirable. What action should be taken? The ultimate answer, how organisms became pests, may tell us how to act. Old cropping systems had man-made ecological sustainability but do not have economic sustainability in modern times. To achieve both we must prevent rather than control pest outbreaks, using old and new ecological tricks, with application of pesticides in emergency cases only. The action will require a move from chemistry to ecology. Optimism on regaining some ecological sustainability is mixed with doubts on economic sustainability. Can farmers be asked to invest in the future at the expense of today's family income? Crop protection faces new technical and moral problems.
Effect of biofumigation with volatiles from <i>Muscodor albus</i> on the viability of <i>Tilletia</i> spp. teliospores (2009)

Volatile organic compounds produced by the fungus Muscodor albus inhibit or kill numerous fungi. The effect of these volatiles was tested on dormant and physiologically active teliospores of the smut fungi Tilletia horrida, Tilletia indica, and Tilletia tritici, which cause kernel smut of rice, Karnal bunt of wheat, and common bunt of wheat, respectively. Reactivated rye grain culture of M. albus was used to fumigate dormant teliospores in dry Petri dishes and physiologically active teliospores on water agar for up to 5 days at 22 degrees C. Teliospores of all 3 species were incapable of germination when fumigated on agar for 5 days. When T. tritici on agar was fumigated only during the initial 48 h of incubation, viability was reduced by 73%-99%. Fumigation of dry loose teliospores of T. tritici caused a 69%-97% loss in viability, whereas teliospores within intact sori were not affected. Dormant teliospores of T. horrida and T. indica were not affected by M. albus volatiles. It appears that M. albus has potential as a seed or soil treatment for controlling seedling-infecting smuts where infection is initiated by germinating teliospores prior to seedling emergence. The volatiles were not effective for postharvest control of teliospores under conditions used in these experiments.
Inhibition of melanoma tumor growth <i>in vivo</i> by survivin targeting (2001)

A role of apoptosis (programmed cell death) in tumor formation and growth was investigated by targeting the apoptosis inhibitor survivin in vivo. Expression of a phosphorylation-defective survivin mutant (Thr(34)-->Ala) triggered apoptosis in several human melanoma cell lines and enhanced cell death induced by the chemotherapeutic drug cisplatin in vitro. Conditional expression of survivin Thr(34)-->Ala in YUSAC2 melanoma cells prevented tumor formation upon s.c. injection into CB.17 severe combined immunodeficient-beige mice. When induced in established melanoma tumors, survivin Thr(34)-->Ala inhibited tumor growth by 60-70% and caused increased apoptosis and reduced proliferation of melanoma cells in vivo. Manipulation of the antiapoptotic pathway maintained by survivin may be beneficial for cancer therapy.