gebhart/patrepeval huggingface dataset:
Contribution of Intercellular-Adhesion Molecule-1 in Allergen-Induced Airway Hyperresponsiveness and Inflammation in Sensitised Brown-Norway Rats (1994)

We investigated the potential role of intercellular-adhesion molecule-1 (ICAM-1) in allergen-induced bronchial hyperresponsiveness (BHR) and inflammation in sensitised Brown-Norway rats. Rats were sensitised with ovalbumin (OA) intraperitoneally and 21 days later they were either exposed to 0.9% NaCl or 1% OA aerosol for 15 min. Rats exposed to OA aerosol were pretreated either with ICAM-1 antibody (3 mg/kg i.p. and i.v., 45 min prior to OA exposure) or with the diluent for the antibody. Eighteen to twenty-four hours after OA or 0.9% NaCl exposure, rats were anaesthetised, tracheostomised and mechanically ventilated, and airway responsiveness to acetylcholine (ACh) aerosol was measured as the provocative concentration of ACh needed to increase pulmorary resistance by 100% (PC100). Mean -log PC100 was increased in rats exposed to OA but pretreated with diluent (2.75 +/- 0.06) compared to rats treated with ICAM-1 antibody (2.51 +/- 0.08; < 0.05). However, only the former group showed significantly higher mean -log PC100 compared to the sensitised group exposed to 0.9% NaCl alone (2.22 +/- 0.12; p < 0.01). There was a significant increase in eosinophil and lymphocyte counts in bronchoalveolar lavage fluid at 24 h in rats pretreated with diluent compared to saline exposed rats. However, in ICAM-1 antibody-pretreated rats, eosinophil and lymphocyte counts were significantly different from diluent-treated ones. We conclude that ICAM-1 antibody inhibits BHR without reducing the influx of inflammatory cells.
Language and Mind (2006)

This is the third edition of Chomsky's outstanding collection of essays on language and mind, first published in 2006. The first six chapters, originally published in the 1960s, made a groundbreaking contribution to linguistic theory. This edition complements them with an additional chapter and a new preface, bringing Chomsky's influential approach into the twenty-first century. Chapters 1-6 present Chomsky's early work on the nature and acquisition of language as a genetically endowed, biological system (Universal Grammar), through the rules and principles of which we acquire an internalized knowledge (I-language). Over the past fifty years, this framework has sparked an explosion of inquiry into a wide range of languages, and has yielded some major theoretical questions. The final chapter revisits the key issues, reviewing the 'biolinguistic' approach that has guided Chomsky's work from its origins to the present day, and raising some novel and exciting challenges for the study of language and mind.
Robust Combining of Disparate Classifiers through Order Statistics (1999)

Integrating the outputs of multiple classifiers via combiners or meta-learners has led to substantial improvements in several difficult pattern recognition problems. In the typical setting investigated till now, each classifier is trained on data taken or resampled from a common data set, or (almost) randomly selected subsets thereof, and thus experiences similar quality of training data. However, in certain situations where data is acquired and analyzed on-line at several geographically distributed locations, the quality of data may vary substantially, leading to large discrepancies in performance of individual classifiers. In this article we introduce and investigate a family of classifiers based on order statistics, for robust handling of such cases. Based on a mathematical modeling of how the decision boundaries are affected by order statistic combiners, we derive expressions for the reductions in error expected when such combiners are used. We show analytically that the selection of the median, the maximum and in general, the $i^{th}$ order statistic improves classification performance. Furthermore, we introduce the trim and spread combiners, both based on linear combinations of the ordered classifier outputs, and show that they are quite beneficial in presence of outliers or uneven classifier performance. Experimental results on several public domain data sets corroborate these findings.
Inside Cover: Naphthyridyl‐Substituted 4,4‐Difluoro‐4‐bora‐3a,4a‐diaza‐s‐indacene (BODIPY) Luminophores: Photophysics and Application as Molecular Imaging Probes in Live Cells (Asian J. Org. Chem. 9/2013) (2013)

Fluorescent Probes The synthesis and photophysics of a family of BODIPY derivatives with a naphthyridine at the C8 position and alkyl, bromo, or dimethylaminoaryl groups at the C2 and C6 positions of the BODIPY core are described by Tia E. Keyes and co-workers in their Full Paper on page 763 ff. The NIR emission of the dimethylaminoaryl compounds is Stokes-shifted and strongly solvent dependent. The emission and Stokes shift are maintained in aqueous media. PEGylation of these compounds renders them water soluble and cell permeable. Their Stokes-shifted fluorescence makes them less prone to self-quenching within live cells than conventional BODIPY fluorophores.
Design of Cast Pin Fin Coldwalls for Air-Cooled Electronics Systems (2004)

At low to moderate Reynolds numbers, cast pin fin coldwalls provide the best performance and lowest unit cost for air-cooled electronics systems. Until recently, insufficient data existed to design coldwalls with moderate length pin fins for electronics systems. Empirical correlations for the Fanning friction factor, f=fS/d,T/d,L/d,Red, and the Colburn j-factor, j=jS/d,T/d,L/d,Red, were previously developed for two flow regimes with a transition Reynolds number, Retrn, separating the two regimes. Using these correlations, the effect of configuration on the design is discussed and a design procedure is proposed. Example problems are presented for (1) a system cooled by an environmental control system, and (2) a system cooled by ambient air using a fan.
Population structure of modern-day Italians reveals patterns of ancient and archaic ancestries in Southern Europe (2019)

European populations display low genetic differentiation as the result of long-term blending of their ancient founding ancestries. However, it is unclear how the combination of ancient ancestries related to early foragers, Neolithic farmers, and Bronze Age nomadic pastoralists can explain the distribution of genetic variation across Europe. Populations in natural crossroads like the Italian peninsula are expected to recapitulate the continental diversity, but have been systematically understudied. Here, we characterize the ancestry profiles of Italian populations using a genome-wide dataset representative of modern and ancient samples from across Italy, Europe, and the rest of the world. Italian genomes capture several ancient signatures, including a non-steppe contribution derived ultimately from the Caucasus. Differences in ancestry composition, as the result of migration and admixture, have generated in Italy the largest degree of population structure detected so far in the continent, as well as shaping the amount of Neanderthal DNA in modern-day populations.
Crystal Structures and Electronic States of High-Pressure-Synthesized (1-x)PbVO3-xBiCrO3 Solid Solutions (2021)

Electronic states in solid-solution transition metal oxides may differ from those in their parent compounds, and this results in interesting electronic properties. In this study, the valence states and electronic properties of solid solutions of (1 − x)PbVO3− xBiCrO3 are reported. The solid solutions are successfully synthesized under high-pressure and high-temperature conditions of 5 GPa or 7 GPa and 1273 K, respectively. A change in the crystal structure from centrosymmetric monoclinic (C2/c), as in BiCrO3, to polar tetragonal (P4mm), as in PbVO3, is observed. A tetragonal-to-cubic phase transition, which results in a negative thermal expansion, was observed in 7/8PbVO3-1/8BiCrO3 at approximately 700 K. X-ray absorption spectroscopy and magnetic studies reveal that the Cr and V atoms are in the valence states 3+ and 4+, respectively, which are the same as those of the parent compounds. Thus, it was concluded that the valence state of V4+/Cr3+ and the electron localization in the (1 − x)PbVO3− xBiCrO3 solid solutions are considerably robust.
Supplementary Data from PKC<b>ϵ</b> Is Required for KRAS-Driven Lung Tumorigenesis (2023)

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Design of an atomic layer deposition reactor for hydrogen sulfide compatibility (2010)

A customized atomic layer deposition (ALD) reactor was designed with components compatible with hydrogen sulfide (H(2)S) chemistry. H(2)S is used as a reactant for the ALD of metal sulfides. The use of H(2)S in an ALD reactor requires special attention to safety issues due to its highly toxic, flammable, and corrosive nature. The reactor was designed with respect to materials compatibility of all wetted components with H(2)S. A customized safety interlock system was developed to shut down the system in the event of toxic gas leakage, power outage, loss of building ventilation or compressed air pressure. ALD of lead sulfide (PbS) and zinc sulfide (ZnS) were demonstrated with no chemical contamination or detectable release of H(2)S.
Suppression of IL-12p70 formation by IL-2 or following macrophage depletion causes T-cell autoreactivity leading to CNS demyelination in HSV-1-infected mice (2017)

We have established two mouse models of central nervous system (CNS) demyelination that differ from most other available models of multiple sclerosis (MS) in that they represent a mixture of viral and immune triggers. In the first model, ocular infection of different strains of mice with a recombinant HSV-1 that expresses murine IL-2 constitutively (HSV-IL-2) causes CNS demyelination. In the second model, depletion of macrophages causes CNS demyelination in mice that are ocularly infected with wild-type (WT) HSV-1. In the present study, we found that the demyelination in macrophage-intact mice infected with HSV-IL-2 was blocked by depletion of FoxP3-expressing cells, while concurrent depletion of macrophages restored demyelination. In contrast, demyelination was blocked in the macrophagedepleted mice infected with wild-type HSV-1 following depletion of FoxP3-expressing cells. In macrophage-depleted HSV-IL-2-infected mice, demyelination was associated with the activity of both CD4 + and CD8 + T cells, whereas in macrophage-depleted mice infected with WT HSV-1, demyelination was associated with CD4 + T cells. Macrophage depletion or infection with HSV-IL-2 caused an imbalance of T cells and T H 1 responses as well as alterations in IL-12p35 and IL-12p40 but not other members of the IL-12 family or their receptors. Demyelination was blocked by adoptive transfer of macrophages that were infected with HSV-IL-12p70 or HSV-IL-12p40 but not by HSV-IL-12p35. These results indicate that suppression of IL-12p70 formation by IL-2 or following macrophage depletion causes T-cell autoreactivity leading to CNS demyelination in HSV-1-infected mice.
Dynamical suppression of Coulomb interaction and sub-fs jitter correction in electron pulse compression (2020)

Abstract Achieving a few-femtosecond (fs) temporal resolution in electron diffraction and electron microscopy is essential for directly tracking the electronic processes and the fastest atomic motions in molecule and condensed matter systems. The intrinsic Coulomb interaction among electrons broadens the pulse duration and restricts the temporal resolution. To tackle this issue, the electron pulse compression by the time-varying electric fields at optical, THz and RF wavelengths has been demonstrated recently. However, the Coulomb interaction still exists in the compression process and the impact of the Coulomb interaction to the compression remains largely unaccounted for. In this work, we quantify the impact of the Coulomb interaction and present three intrinsic characters of Coulomb interaction in the compression process: the Coulomb interaction is dynamically suppressed as the compression field strength rises; the electron pulse with arbitrary kinetic energy (eV to MeV) suffers the same amount of Coulomb interaction, i.e. the Coulomb interaction is independent on the kinetic energy in compression; the dynamical suppression of Coulomb interaction within a single pulse gives rise to a dispersion of the temporal focus and impedes the further compression to attosecond. Potential applications based on the revealed characters of the Coulomb interaction in the compression process are discussed. Based on the dynamical evolution of the Coulomb interaction, three stages are identified to describe the compression process, which is beyond the ballistic compression model. Additionally, a robust and noninvasive jitter correction approach matching well with the compression regime is presented and the proof-of-principle experiment demonstrates a sub-fs accuracy.
Specific nicking of DNA at apurinic sites by peptides containing aromatic residues. (1981)

Tripeptides containing aromatic residues between basic ones, such as Lys-Trp-Lys and Lys-Tyr-Lys can nick supercoiled or relaxed DNAs containing apurinic/apyrimidinic sites (AP-sites). The nicking, which is ionic strength-dependent, occurs at AP-sites, since native PM2 DNA is not hydrolyzed. The nicking activity of the tripeptides at AP-sites occurs in total darkness. An activation energy of 21 +/- 2 kcal . mol-1 has been calculated for the incision of PM2 DNA by Lys-Trp-Lys. Tripeptides without aromatic residues, such as Lys-Ala-Lys-O-Methyl and Lys-Lys-Lys, can nick apurinic DNA, although with a much lower efficiency. Relaxed depurinated PM2 DNA is a poor substrate for the tripeptide, indicating that single-stranded regions are better recognition sites. The nicking of the DNA backbone probably occurs by beta elimination, since reduced AP-sites do not act as substrate. The termini generated are 3'-hydroxyl and 5'-phosphoryl.
Earrtum: Directional Reflectance and Emissivity of an Opaque Surface (1966)

Get PDF Email Share Share with Facebook Tweet This Post on reddit Share with LinkedIn Add to CiteULike Add to Mendeley Add to BibSonomy Get Citation Copy Citation Text Fred E. Nicodemus, "Earrtum: Directional Reflectance and Emissivity of an Opaque Surface," Appl. Opt. 5, 715-715 (1966) Export Citation BibTex Endnote (RIS) HTML Plain Text Citation alert Save article
Locomotion Monitoring Using Body Sensor Networks (2008)

Body sensor networks (BSNs) create an enormous opportunity to revolutionalize the way we learn, work, entertain and live today. A particularly promising application of BSNs is in health monitoring. Research indicates that various disorders in aging ranging from mild cognitive impairment to dementia and Alzheimer’s could be diagnosed early based on the study of locomotion. Sensor platforms integrated into clothing provide the possibility of reliable locomotion monitoring. In this work, we demonstrate a real-time wireless sensor system that quantitatively measures some of the factors involved in locomotion.
Endovascular trapping of giant serpentine aneurysms by using Guglielmi detachable coils. Successful reduction of mass effect (2001)

Giant serpentine aneurysms (GSAs) are defined as partially thrombosed giant aneurysms with persistent serpentine vascular channels. Surgical management of these rare lesions is difficult because of their large size, complex structure, and unique hemodynamics. The authors report two cases of patients harboring GSAs with mass effect, which were managed effectively with endovascular treatment. The first patient was a 48-year-old man who presented with left homonymous hemianopsia caused by a GSA involving the terminal portion of the right internal carotid artery. The second patient, a 10-year-old boy, presented with tetraparesis from compression of the cervicomedullary junction by a GSA of the right vertebral artery. In each case, after confirming collateral flow by temporarily occluding the proximal artery, the aneurysm was trapped by placement of Guglielmi detachable coils at the sites at which the serpentine channels entered and exited the aneurysm. The midportion of each channel was isolated completely without packing, to maximize resorption of the devascularized mass. Mass effect and clinical symptoms rapidly improved in both cases, with no associated morbidity. We recommend endovascular trapping as a safe and effective therapeutic option for GSAs.
xMD-miRNA-seq to generate near in vivo miRNA expression estimates in colon epithelial cells (2018)

Accurate, RNA-seq based, microRNA (miRNA) expression estimates from primary cells have recently been described. However, this in vitro data is mainly obtained from cell culture, which is known to alter cell maturity/differentiation status, significantly changing miRNA levels. What is needed is a robust method to obtain in vivo miRNA expression values directly from cells. We introduce expression microdissection miRNA small RNA sequencing (xMD-miRNA-seq), a method to isolate cells directly from formalin fixed paraffin-embedded (FFPE) tissues. xMD-miRNA-seq is a low-cost, high-throughput, immunohistochemistry-based method to capture any cell type of interest. As a proof-of-concept, we isolated colon epithelial cells from two specimens and performed low-input small RNA-seq. We generated up to 600,000 miRNA reads from the samples. Isolated epithelial cells, had abundant epithelial-enriched miRNA expression (miR-192; miR-194; miR-200b; miR-200c; miR-215; miR-375) and overall similar miRNA expression patterns to other epithelial cell populations (colonic enteroids and flow-isolated colon epithelium). xMD-derived epithelial cells were generally not contaminated by other adjacent cells of the colon as noted by t-SNE analysis. xMD-miRNA-seq allows for simple, economical, and efficient identification of cell-specific miRNA expression estimates. Further development will enhance rapid identification of cell-specific miRNA expression estimates in health and disease for nearly any cell type using archival FFPE material.
p85β phosphoinositide 3-kinase regulates CD28 coreceptor function (2009)

CD28 is a receptor expressed on T cells that regulates their differentiation after antigen stimulation to long-term-survival memory T cells. CD28 enhances T-cell receptor signals and reduces expression of CBL ubiquitin ligases, which negatively control T-cell activation. In the absence of CD28 ligation during the primary stimulation, CBL levels remain high and T cells fail to mount an efficient secondary response. CD28 associates with p85alpha, one of the regulatory subunits of phosphoinositide-3-kinase (PI3K), but the relevance of this interaction is debated. We examined here the contribution of the other ubiquitous PI3K regulatory subunit, p85beta, in CD28 function. We describe that p85beta bound to CD28 and to CBL with greater affinity than p85alpha. Moreover, deletion of p85beta impaired CD28-induced intracellular events, including c-CBL and CBL-b down-regulation as well as PI3K pathway activation. This resulted in defective differentiation of activated T cells, which failed to exhibit an efficient secondary immune response. Considering that p85beta-deficient T cells fail in recall responses and that p85beta binds to and regulates CD28 signals, the presented observations suggest the involvement of p85beta in CD28-mediated activation and differentiation of antigen-stimulated T cells.
Erratum: “Magnetoresistance based first-order reversal curve analysis of magnetic tunnel junctions” [Appl. Phys. Lett. 95, 022514 (2009)] (2010)

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Involvement of a botulinum toxin-sensitive 22-kDa G protein in stimulated exocytosis of human neutrophils. (1994)

Studies of human peripheral blood neutrophils (PMNs) demonstrated that botulinum neurotoxin D (BT-D) ADP-ribosylates a 22-kDa PMN G protein (G22k) and inhibits the exocytosis of both specific and azurophilic granules stimulated by FMLP. Furthermore, this inhibition of PMN exocytosis by BT-D was found to be correlated with the degree of irreversible ADP-ribosylation of G22k by BT-D and to require modification of at least 85% of PMN G22k before significant inhibition of secretion is observed. Although both pertussis toxin and BT-D inhibited exocytosis in FMLP-stimulated PMNs, the inhibitory effects of the two toxins were found to be additive. Pertussis toxin and BT-D also inhibited Ca2+/GTP/GTP gamma S-induced secretion in digitonin-permeabilized PMNs, but there were distinct differences between the inhibitory effects of the two toxins. In contrast to BT-D, the exotoxin botulinum C3 was found to ADP-ribosylate primarily a 24- to 25-kDa PMN protein, and it was not found to inhibit Ca(2+)- and GTP-induced secretion in permeabilized PMNs. Ultrastructural studies of BT-D-treated PMNs showed an accumulation of distinct membrane-bound organelles in the periphery of the cells after FMLP stimulation, suggestive of a toxin-induced block in organelle-plasma membrane fusion. Taken together, these findings indicate that BT-D-sensitive G22k has a functional role in stimulated exocytosis of PMNs.
Thermal Ring-Expansion of N-Acyl Cyclopropyl Imines (1994)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTThermal Ring-Expansion of N-Acyl Cyclopropyl IminesPei-Lin Wu and Wen-Shan WangCite this: J. Org. Chem. 1994, 59, 3, 622–627Publication Date (Print):February 1, 1994Publication History Published online1 May 2002Published inissue 1 February 1994https://pubs.acs.org/doi/10.1021/jo00082a020https://doi.org/10.1021/jo00082a020research-articleACS PublicationsRequest reuse permissionsArticle Views694Altmetric-Citations19LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-AlertscloseSupporting Info (1)»Supporting Information Supporting Information Get e-Alerts
Comparative evaluations of 2-D predictor implementations for lossless compression of images (2002)

A 2-D lossless predictive coding system is implemented using several existing and recently proposed algorithms. These are also evaluated for autoregressive (AR) and autoregressive moving-average (ARMA) predictor models. Results are given, using test images, which allow that the choice of the algorithms and the model can significantly affect the compression factor.
Nano Barcoding Cell-Based Biosensor Using Fluorophor-Embedded Silica Nanotubes (2011)

A simple and reliable drug screening method was developed using peptide hydrogel cell beads coded by quantum dot-embedded silica nanotubes. Very long silica nanotubes were fabricated upon a nanoporous alumina template using sol-gel techniques. The physical shapes of the nanotubes were measured by TEM (Transmission Electron Microscope). Green and red quantum dots embedded in silica nanotubes were applied to peptide hydrogel cell beads as coding materials. This was confirmed by confocal microscopy that examined fluorescence levels and quantum dot shapes. The peptide hydrogel cell beads coded with silica nanotubes were loaded into a PDMS single chamber in order to assess the effect of doxorubicin on HMEC and MCF-7 cells, which was measured in hydrogel cell beads by live and dead cell staining using coding materials. As a result, MCF-7 cancer cells were more affected by doxorubicin than HMEC; however, doxorubicin induced HMEC cell death at a relatively high concentration (> 5 microg/ml).