gebhart/patrepeval huggingface dataset:
Commentary: methods women can use that may prevent sexually transmitted disease, including HIV. (1992)

Although sexually transmitted diseases, including human immunodeficiency virus (HIV), are a major concern for women, few prevention messages are targeted specifically to women. Those that are generally stress abstaining, altering the number or selection of partners, and urging partners to use condoms. But these behaviors may be unrealistic for many women, particularly women who are at highest risk for sexually transmitted diseases, because they require significant changes in life-style or depend on male-controlled condom use. Recommendation of contraceptives for prevention of sexually transmitted diseases depends largely on how well specific methods perform under controlled conditions, either in the laboratory or in clinical trials. Observational studies, which better reflect day-to-day use, indicate that condoms, barriers, and spermicides, used properly and consistently, can provide substantial protection against various sexually transmitted diseases. Condoms can similarly help protect against HIV, but studies of barriers and spermicides are scant and currently inconclusive. Finally, those methods that are controlled by women are consistently more effective in preventing sexually transmitted diseases. Thus, although condoms used well are still the best choice, the imperative for female-controlled methods indicates that diaphragms and spermicides should receive greater emphasis in prevention messages.
TLR4 acts as a death receptor for ultraviolet radiation (UVR) through IRAK‐independent and FADD‐dependent pathway in macrophages (2016)

UVR-induced apoptosis in cutaneous antigen presenting cells (APC) causes systemic immune suppression and is dependent on TLR4/MyD88 signalling, but the apoptotic signalling pathways have not been defined. Macrophages pretreated with lipopolysaccharide (LPS) were unresponsive to subsequent LPS treatment, however, but were susceptible to UVR-induced apoptosis. Macrophage survival and apoptotic events after UVR were also unaffected by treatment with TLR4 antagonists, a blocking IgG or a TLR4 analog antagonist, suggesting that UVR cell death is independent of a soluble ligand. After UVR, IRAK4<sup>KDKI</sup> (catalytically inactive IRAK4) and wild-type (WT) macrophages show equivalent levels of survival, as measured by MTT assay, and apoptosis, as measured by cleaved caspase-3. Furthermore, in macrophages from both mice, UVR activated caspase-8 and PARP, while inactivating Rip3. This finding is supported by a lack of IRAK1 degradation after UVR, compared to treatment with TLR2 or TLR4 agonists. UVR induced association of MyD88 with FADD, an extrinsic apoptotic pathway protein, but not IRAK4. UVR-induced migration of FADD to the cell membrane of WT macrophages, but not MyD88<sup>-/-</sup> macrophages, was observed (confocal microscopy). Co-immunoprecipitation using an epitope-tagged MyD88 revealed that FADD, but not TRADD, was recruited to MyD88 within 30 minutes of UVR exposure. UVR engages TLR4/MyD88 as a death signalling complex, rather than the classical inflammatory signalling pathway triggered by PAMP recognition of TLR4. These studies provide the rationale for the future development of topical TLR4 modulating therapies to interfere with this UVB-mediated apoptosis and the associated negative consequences of immune suppression.
Fibrinopeptide A is released into the coronary circulation after coronary spasm. (1990)

To examine whether acute myocardial ischemia activates the coagulation system and platelet activation in the coronary circulation, we measured plasma levels of fibrinopeptide A and beta-thromboglobulin in the coronary sinus and the aortic root simultaneously in 15 patients with coronary spastic angina before and after the left coronary spasm induced by intracoronary injection of acetylcholine and in 15 patients with stable exertional angina before and after acute myocardial ischemia induced by rapid atrial pacing. Fifteen patients with chest pain but normal coronary arteries and no coronary spasm served as controls. The coronary sinus-arterial difference of fibrinopeptide A increased markedly (p less than 0.001) from 0.1 +/- 0.2 to 4.3 +/- 0.7 ng/ml after the anginal attacks in the coronary spastic angina group. However, fibrinopeptide A levels remained unchanged after the attacks in the stable exertional angina group and after intracoronary injection of acetylcholine in the control group. Plasma beta-thromboglobulin levels remained unchanged after the attacks in both patient groups and after acetylcholine in the control group. Our data indicate that coronary spasm induces thrombin generation and may lead to thrombus formation in the coronary artery involved, but pacing-induced ischemia does not activate the coagulation system.
A Flexible Wildcard-Pattern Matching Accelerator via Simultaneous Discrete Finite Automata (2017)

Regular expression matching becomes indispensable elements of Internet of Things network security. However, traditional ternary content addressable memory (TCAM) search engine is unable to handle patterns with wildcards, as it precisely tracks only one active state with single transition. This paper proposes a promising simultaneous pattern matching methodology for wildcard patterns by two separated engines to represent discrete finite automata. A key preprocessing to encode possible postfix pattern by a unique key ensures that follow-up patterns can accurately traverse all possible matches with limited hardware resources. This approach is practical and scalable for achieving good performance and low space consumption in network security, and it can be applicable to any regular expressions even with multiwildcard patterns. The experimental results demonstrate that this scheme can efficiently and accurately recognize wildcard patterns by simultaneously tracking only two active states. By adopting SRAM TCAM in the proposed architecture, the energy consumption is reduced to around 39%, compared with the energy consumption using a computing system that contains a large memory lookup and comparison overhead.
A Hybrid Approach for Automatic Model Recommendation (2018)

One of the challenges of automating machine learning applications is the automatic selection of an algorithmic model for a given problem. We present AutoDi, a novel and resource-efficient approach for model selection. Our approach combines two sources of information: metafeatures extracted from the data itself and word-embedding features extracted from a large corpus of academic publications. This hybrid approach enables AutoDi to select top-performing algorithms both for widely and rarely used datasets by utilizing its two types of feature sets. We demonstrate the effectiveness of our proposed approach on a large dataset of 119 datasets and 179 classification algorithms grouped into 17 families. We show that AutoDi can reach an average of 98.8% of optimal accuracy and select the optimal classification algorithm in 49.5% of all cases.
Toxicity of Fatty Acid Salts to German and American Cockroaches (2008)

The toxicity of fatty acid salts to German, Blattella germanica (L.), and American cockroaches, Periplaneta americana (L.), was evaluated. Potassium and sodium laurate caused up to 95% mortality of German cockroaches and 100% mortality of American cockroaches. Even-numbered potassium fatty acid salts, C8-C18 were assessed for toxicity at 0.125, 0.25, 0.5, 1, and 2% concentrations by a 30-s immersion of cockroaches. The more soluble of the fatty acid salts at 2% concentration caused 65-95% mortality of German cockroaches and 100% mortality of American cockroaches. Potassium oleate, C18, was most toxic to both German (LC50 = 0.36%) and American (LC50 = 0.17%) cockroaches. Fatty acid salt solutions on a substrate were tested by placing cockroaches in contact with treated floor tiles immediately after application (wet) or after the solutions had dried. Sodium laurate and potassium caprate caused mortality of German (62 +/- 17.4 and 58 +/- 12.6%, respectively) and American cockroaches (52 +/- 18.5 and 28 +/- 4.9%, respectively) on wet tiles, whereas potassium oleate caused mortality of German cockroaches (67 +/- 14.1%) only. Dry fatty acids caused no mortality among exposed cockroaches. Fatty acid salt solutions can be effective in killing German and American cockroaches but only when insects are thoroughly wetted with 1-2% fatty acid salt solutions.
Novel complexation hydrogels for oral peptide delivery: In vitro evaluation of their cytocompatibility and insulin‐transport enhancing effects using Caco‐2 cell monolayers (2003)

Poly[methacrylic acid-grafted-poly(ethylene glycol)] [P(MAA-g-EG)] is a complexation hydrogel molecularly designed for oral peptide delivery. In this work, the cytotoxicity and insulin-transport enhancing effect of P(MAA-g-EG) microparticles on intestinal epithelial cells were evaluated using Caco-2 cell monolayers. A series of P(MAA-g-EG) microparticles with different polymer compositions were prepared by a photo-initiated free radical solution polymerization and subsequent pulverization. The hydrogel microparticles were preswollen in either Ca2+-containing (CM+) or Ca2+-free medium (CM-; pH 7.4) and applied to the apical side of the Caco-2 monolayers. No significant cytotoxic effects, as determined by a calorimetric assay with P(MAA-g-EG) microparticles preswollen in the CM+, were observed at doses ranging from 3 to 31 mg/cm2 of cell monolayer. Transepithelial electrical resistance (TEER) measurements showed that the P(MAA-g-EG) microparticles induced a Ca2+ concentration-dependent lowering in TEER values. The reduction effect in CM- media was greater than that in CM+ media (17 +/- 2% reduction in CM+ and 45 +/- 3% reduction in CM-, respectively). Insulin transport in the presence of the preswollen P(MAA-g-EG) microparticles was also strongly depended on the Ca2+ concentration in the medium. The respective estimated permeability for insulin alone and the insulin with hydrogels in CM+ were 0.77 and 1.16 x 10(-8) cm/s, whereas those in CM- were 1.18 and 24.78 x 10(-8) cm/s. The results demonstrate that the P(MAA-g-EG) hydrogel microparticles could be used as a cytocompatible carrier possessing the transport-enhancing effect of insulin on the intestinal epithelial cells.
In vivoAnti-Cancer Activity of KoreanAngelica Gigasand its Major Pyranocoumarin Decursin (2009)

We have reported that a 10-herbal traditional formula containing Korean Angelica gigas Nakai (AGN) exerts potent anti-cancer efficacy and identified decursin and decursinol angelate (DA) from AGN as novel anti-androgens. Here, we determined whether AGN would exert in vivo anti-cancer activity and whether decursin or DA could account for its efficacy. The AGN ethanol extract was tested against the growth of mouse Lewis lung cancer (LLC) allograft in syngenic mice or human PC-3 and DU145 prostate cancer xenograft in immunodeficient mice. The pharmacokinetics of decursin and DA were determined. The AGN extract significantly inhibited LLC allograft growth (30 mg/kg) and PC-3 and DU145 xenograft growth (100 mg/kg) without affecting the body weight of the host mice. Biomarker analyses revealed decreased cell proliferation (Ki67, PCNA), decreased angiogenesis (VEGF, microvessel density) and increased apoptosis (TUNEL, cPARP) in treated tumors. Decursin and DA injected intraperitoneally were rapidly hydrolyzed to decursinol. Decursinol and decursin at 50 mg/kg inhibited LLC allograft growth to the same extent, comparable to 30 mg AGN/kg. Therefore the AGN extract possessed significant in vivo anti-cancer activity, but decursin and DA only contributed moderately to that activity, most likely through decursinol.
<title>Stress effects in twisted highly birefringent fibers</title> (1994)

Hydrostatic pressure and uniaxial longitudinal strain effects in twisted highly birefringent optical fibers have been investigated from the point of the Marcuse mode-coupling theory. The problem is analyzed in terms of local normal modes of the ideal fiber and in the limit of weak twist, where large linear birefringence dominates over twist effect, and therefore twist coupling between local modes is not effective. The authors present the results of birefringence measurements in highly birefringent bow-tie fibers influenced simultaneously by hydrostatic pressure up to 100 MPa and twisting the result for highly birefringent elliptical-core fibers influenced by uniaxial longitudinal strain up to 4000 (mu) (epsilon) and twisting effect. The birefringence measurement method is based on twist-induced effects and has been successfully applied in a stress environment. The experiment was conducted with a specially designed stress generating device that makes it possible to simultaneously generate various mechanical perturbations such as hydrostatic and radial pressure, axial strain and twist, allowing study of their influence on mode propagation in optical fibers. A comparison with theoretical results as well as with pervious experimental data on stress influence on the beat length parameter in highly birefringent fibers is also provided.
Biochemical changes during sucrose deprivation in higher plant cells. (1986)

The mobilization of stored carbohydrates (sucrose and starch) during sucrose starvation was studied with sycamore (Acer pseudoplatanus) cells. When sucrose was omitted from the nutrient medium, vacuolar sucrose was first consumed. When a threshold of intracellular sucrose concentration was attained the cytoplasmic phosphorylated compounds decreased whereas cytoplasmic Pi increased symmetrically. Such a situation triggered starch breakdown. When almost all the intracellular sucrose pool had disappeared, the cell respiration rates (normal and uncoupled) declined progressively. The decrease in the rate of respiration triggered by sucrose starvation was attributable neither to the availability of substrate for mitochondrial respiration nor to a decrease in the maximal rate of O2 consumption by mitochondria expressed in terms of nanomole of O2 consumed per min/mg of mitochondrial protein. In fact, the uncoupled respiration rates decreased in parallel with the decrease in total intracellular cardiolipin or cytochrome aa3. These results demonstrate therefore that after a long period of sucrose starvation the progressive decrease in the uncoupled rate of O2 consumption by sycamore cells was attributable to a progressive diminution of the number of mitochondria/cell.
Meat Analogues: Plant based alternatives to meat products- A review (2015)

A meat analog, also called a meat substitute, mock meat, faux meat or imitation meat, approximates certain aesthetic qualities and chemical characteristics of specific types of meat. The consumption of vegetable proteins in food products has been increasing over the years because of animal diseases, global shortage of animal protein, strong demand for wholesome and religious (halal) food, and economic reasons. A meat-based diet requires a significantly greater amount of environmental resources per calorie compared to a more grain-based diet i.e. 2 to 15 kg plant foods are needed to produce 1 kg of meat. Developing new food products that are attractive to the consumers is a challenge. However, it is even more complex when these new foods are meant as a substitute for products that are highly appreciated and accepted, like meat. This challenge was accepted to develop new sustainable meat substitutes to reduce the negative environmental impact of industrial-scale meat production for human consumption. Happily there is an increasing importance of legume and oilseed proteins in the manufacturing of various functional food products due to their high-protein contents. However, the greatest obstacle to utilize these legumes and oilseeds is the presence of antinutrients, though these can successfully removed or inactivated by employing certain processing methods. Legumes and oilseeds provide well-balanced amino acid profiles when consumed with cereals. Soybean proteins, wheat gluten, cottonseed proteins, and other plant proteins have been used for preparation of meat anlogues successfully. Texturized vegetable proteins can substitute meat products while providing an economical, functional and high-protein food ingredient or can be consumed directly as a meat analogues. Meat analogues are successful because of their healthy image (cholesterol free), meat-like texture, and low cost. Mycoprotein a meat analog is fungal in origin and is used as a high-protein, low-fat, good texture and health-promoting food ingredient. Texturized vegetable proteins and a number of mycoprotein based products are accepted as analogues food. These are some constrains also in the production and consumption of meat analogues. Further research however is required to optimize molecular, nutritional, and functional properties of alternative protein sources to meat and to spread out the current knowledge to encourage the beneficial effects of alternative protein sources, as outlined in this review.
Novel Chitosan-Spotted Alginate Fibers from Wet-Spinning of Alginate Solutions Containing Emulsified Chitosan−Citrate Complex and their Characterization (2008)

The major problem associated with the production of alginate/chitosan hybridized fibers by wet spinning is the formation of gels due to ionic interactions of the oppositely charged molecules of alginate and chitosan when these two polymers are directly mixed. Here, we proposed a novel method of using chitosan in the form of an emulsion. The emulsion was prepared by adding a primary emulsion of olive oil in a sodium dodecyl sulfate (SDS) aqueous solution into a chitosan-citrate complex. The complexation of chitosan with citric acid is the key of this method. The citrate ions neutralize the positive charges of chitosan, rendering the chitosan-citrate complex to readily penetrate into the core of the SDS/olive oil micelles. The obtained emulsified chitosan-citrate complex (hereafter, the chitosan-citrate emulsion) of varying amount was then added into an alginate aqueous solution to prepare the alginate/chitosan spinning dope suspensions. The alginate/chitosan hybridized fibers showed spotty features of the emulsified chitosan-citrate complex particles locating close to the surface and the inside of the hybridized fibers. At the lowest content of incorporated chitosan (i.e., 0.5% w/w chitosan), both the tenacity and the elongation at break of the obtained chitosan-spotted alginate fibers were the greatest. Further increase in the chitosan content resulted in a monotonous decrease in the property values. Lastly, preliminary studies demonstrated that the obtained chitosan-spotted alginate fibers showed great promises as carriers for drug delivery.
A variable-stress shallow trench isolation (STL) technology with diffused sidewall doping for submicron CMOS (2003)

A shallow trench isolation (STI) technology, RIE (reactive ion etching), CVD (chemical vapor deposition) oxide fill, and polarization are used to realize lithography-limited, submicron device and isolation dimensions. A novel boron diffusion technique is used for nMOSFET field doping, so that the parasitic sidewall inversion (leakage) problem is eliminated. It is shown that both the channel width bias and the narrow channel effect are greatly reduced in the STI technology. The diffused field also allows the boron doping to be self-aligned to the n-well with a single masking step in CMOS. STI is used in conjunction with a MINT (merged isolation and node trench) cell in 16-Mb DRAM (dynamic random access memory) technology.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">&gt;</ETX>
Structural Dynamics of Overcrowded Alkene-Based Molecular Motors during Thermal Isomerization (2014)

Synthetic light-driven rotary molecular motors show complicated structural dynamics during the rotation process. A combination of DFT calculations and various spectroscopic techniques is employed to study the effect of the bridging group in the lower half of the molecule on the conformational dynamics. It was found that the extent to which the bridging group can accommodate the increased folding in the transition state is the main factor in rationalizing the differences in barrier height and, as a consequence, the rotary speed. These findings will be essential in designing future rotary molecular motors.
Sutureless Microvascular Anastomosis: Literature Review (2019)

Traditionally, suturing techniques have been the mainstay for microvascular anastomoses, but owing to its technical difficulty and labour intensity, considerable work has gone into the development of sutureless microvascular anastomoses. In this review, the authors take a brief look at the developments of this technology through the years, with a focus on the more recent developments of laser-assisted vascular anastomoses, the unilink system, vascular closure staples, tissue adhesives, and magnets. Their working principles, with what has been found concerning their advantages and disadvantages are discussed.
mRNA Splicing Regulates Human Papillomavirus Type 11 E1 Protein Production and DNA Replication (2003)

The papillomavirus replicative helicase E1 and the origin recognition protein E2 are required for efficient viral DNA replication. We fused the green fluorescent protein (GFP) to the human papillomavirus type 11 E1 protein either in a plasmid with the E1 coding region alone (nucleotides [nt] 832 to 2781) (pGFP-11E1) or in a plasmid containing both the E1 and E2 regions (nt 2723 to 3826) and the viral origin of replication (ori) (p11Rc). The former supported transient replication of an ori plasmid, whereas the latter was a self-contained replicon. Unexpectedly, these plasmids produced predominantly a cytoplasmic variant GFP or a GFP-E1 E4 protein, respectively. The majority of the mRNAs had an intragenic or intergenic splice from nt 847 to nt 2622 or from nt 847 to nt 3325, corresponding to the E2 or E1 E4 messages. pGFP-11E1dm and p11Rc-E1dm, mutated at the splice donor site, abolished these splices and increased GFP-E1 protein expression. Three novel, alternatively spliced, putative E2 mRNAs were generated in higher abundance from the mutated replicon than from the wild type. Relative to pGFP-11E1, low levels of pGFP-11E1dm supported more efficient replication, but high levels had a negative effect. In contrast, elevated E2 levels always increased replication. Despite abundant GFP-E1 protein, p11Rc-E1dm replicated less efficiently than the wild type. Collectively, these observations show that the E1/E2 ratio is as important as the E1 and E2 concentrations in determining the replication efficiency. These findings suggest that alternative mRNA splicing could provide a mechanism to regulate E1 and E2 protein expression and DNA replication during different stages of the virus life cycle.
The decomposition of a triply‐charged metastable positive ion of biphenyl (1970)

Abstract The transition, [C12H10] +3 →[C 11 H 7 ] +2 + [CH 3 ] + , has been detected both in the ion kinetic energy spectrum and in the mass spectrum of biphenyl. The width of a resulting ‘metastable peak’ has been measured by setting the magnetic field to accept [C 11 H 7 ] +2 ions and scanning the high voltage at fixed electric sector voltage. The kinetic energy released in the decomposition, calculated from the peak width, amounted to 4.5 eV. With the assumption that this energy release is due entirely to charge separation, the charge distribution in [C 12 H 10 ] +3 is discussed. The derivation of the equations used to calculate the energy released is given in the Appendix.