gebhart/patrepeval huggingface dataset:
Analytical investigation techniques in the service of liposome development (2020)

The quality of the liposome formulations differs based on the features of the compositions. Several investigation methods help with their results to make the right decision to achieve an optimised preparation. During these sets of experiments to prepare liposomes via the thin-film hydration technique, dynamic light scattering (DLS) and zeta potential measurements, thermogravimetric analysis (TGA), differential scanning calorimetry (DSC) investigations, and Fourier-transformed infrared (FT-IR) studies were used to select the more optimal compositions. The formulations differed in the phospholipid-cholesterol ratio, the type of the applied PEGylated phospholipid, the quality of the solvent, the hydration media and the cryoprotectant.
Chemical durability of high-temperature superconductor YBa2Cu3O7−x in aqueous environments (1988)

The stability of YBa2Cu3O7−x in water and 100% humidity has been investigated at three temperatures using pH measurements, x-ray diffraction, and scanning electron microscopy. The oxide-ceramic superconductor is highly unstable and reacts rapidly with water and also degrades in moisture. Dissolution of the oxide perovskite in water is highly incongruent. The corrosion products are found to be BaCO3, CuO, O2, etc. Barium hydroxide is first formed which further reacts with atmospheric CO2 to form needle-shaped crystals of BaCO3. For any practical applications, devices made from these materials would have to be protected with an impermeable coating to prevent deterioration from atmosphere.
Contemporary Nutrition Interventions to Optimize Performance in Middle-Distance Runners (2018)

Middle-distance runners utilize the full continuum of energy systems throughout training, and given the infinite competition tactical scenarios, this event group is highly complex from a performance intervention point of view. However, this complexity results in numerous potential periodized nutrition interventions to optimize middle-distance training adaptation and competition performance. Middle-distance race intensity is extreme, with 800- to 5,000-m races being at ∼95% to 130% of VO<sub>2</sub>max. Accordingly, elite middle-distance runners have primarily Type IIa/IIx fiber morphology and rely almost exclusively on carbohydrate (primarily muscle glycogen) metabolic pathways for producing adenosine triphosphate. Consequently, the principle nutritional interventions that should be emphasized are those that optimize muscle glycogen contents to support high glycolytic flux (resulting in very high lactate values, of >20 mmol/L in some athletes) with appropriate buffering capabilities, while optimizing power to weight ratios, all in a macro- and microperiodized manner. From youth to elite level, middle-distance athletes have arduous racing schedules (10-25 races/year), coupled with excessive global travel, which can take a physical and emotional toll. Accordingly, proactive and integrated nutrition planning can have a profound recovery effect over a long race season, as well as optimizing recovery during rounds of championship racing. Finally, with evidence-based implementation and an appropriate risk/reward assessment, several ergogenic aids may have an adaptive and/or performance-enhancing effect in the middle-distance athlete. Given that elite middle-distance athletes undertake ∼400 to 800 training sessions with 10-25 races/year, there are countless opportunities to implement various periodized acute and chronic nutrition-based interventions to optimize performance.
Experience with sonidegib in patients with advanced basal cell carcinoma: case reports (2022)

Sonidegib is a Hedgehog signalling pathway inhibitor approved for use in patients with advanced basal cell carcinoma (BCC) not eligible for surgery or radiotherapy. This report describes clinical experience with sonidegib in two patients with locally advanced BCC (one with a tumour adjacent to the right eye and the other with a tumour associated with the left ear) and in one patient with Gorlin syndrome. Two of the patients had recurrent and intractable tumours. Treatment with sonidegib 200 mg/day led to remission in both patients with locally advanced BCC within 7 months and to a reduction in the size and number of lesions after 4 months in the patient with Gorlin syndrome. Adverse effects reported in these patients were cramps, alopecia, ageusia and weight loss, all of which were mild and consistent with the known toxicity profile for sonidegib. Sonidegib has an important role to play in the effective treatment of challenging cases of advanced BCC. In parallel, a need remains to improve management protocols for patients with advanced BCC, particularly through earlier intervention and a multidisciplinary team approach.
Catalytic CO Oxidation over Au Nanoparticles Supported on Yttria-Stabilized Zirconia (2012)

Gold nanoparticles supported on yttria-stabilized zirconia (YSZ) were synthesized using a modified alcohol method which involves the stabilizing agent, polyvinylpyrrolidone (PVP). Two different average sizes (13.1 and 17.1 nm) of Au nanoparticles were synthesized. These catalysts were tested for gas phase CO oxidation. Since PVP is known to block the active Au sites, the catalysts were calcined at 300°C and 600°C in order to remove the PVP. Overall, higher catalytic activity was found for the smaller Au nanoparticles. It was also found that calcination is required in order to achieve activity, even though the particle size increases with this treatment. The effect of calcination temperature did not prove to be significant. It is demonstrated that O2- ionically conductive YSZ is a promising catalyst support that can finely disperse and stabilize Au nanoparticles for CO oxidation.
Formation of TiO<sub>2</sub> Coating Layer on the Surface Treated Ti Alloys (2008)

Pure Titanium alloys are superiorities of biocompatibility, mechanical properties and chemical stability. The biocompatibility of Ti alloy is related to the surface effect. In this study, Ti Alloys were treated by alkali and acid activation process. And through the sol coating layer, biocompatibility were investigated. Consequently, it appeared that the porous layer was generated on the surface of alloy by surface treatment and sol coating process. It was found that with surface treatment on Ti alloy, the formation speed of porous was much quicker compared with those ones without treatment. Therefore, the biocompatibility was improved.
Renal medullary interstitial infusion of norepinephrine in anesthetized rabbits: methodological considerations (1999)

We tested methods for delivery of drugs to the renal medulla of anesthetized rabbits. Outer medullary infusion (OMI) of norepinephrine (300 ng. kg(-1). min(-1)), using acutely or chronically positioned catheters, reduced both cortical (CBF; 15%) and medullary perfusion (MBF; 23-31%). Inner medullary infusion (IMI) did not affect renal hemodynamics, whereas intravenous infusion reduced CBF (15%) without changes in MBF. During OMI of [(3)H]norepinephrine, much of the radiolabel (approximately 40% with chronically positioned catheters) spilled over systemically. Nevertheless, autoradiographic analysis showed the concentration of radiolabel was about fourfold greater in the infused medulla than the cortex. In contrast, during IMI, only approximately 5% of the infused radiolabel spilled over into the systemic circulation and approximately 64% was excreted by the infused kidney. The resultant intrarenal levels of radiolabel were considerably less with IMI compared with OMI. In rabbits, OMI therefore provides a useful method for targeting agents to the renal medulla, but given the considerable systemic spillover with OMI, its utility is probably limited to substances that are rapidly degraded in vivo.
Biomarker Validation in Blood Specimens by Selected Reaction Monitoring Mass Spectrometry of N-Glycosites (2011)

Targeted mass spectrometry using selected reaction monitoring (SRM) has emerged as the method of choice for the validation in blood serum, plasma, or other clinically relevant specimens of biomarker candidates arising from comparative proteomics or other discovery strategies. Here, we describe a method in which N-glycosites are selectively enriched from biological specimens by solid phase capture and PNGase F release, and then analyzed by SRM. Focusing the highly sensitive targeted mass spectrometry method on a subproteome enriched for secreted and shed proteins reproducibly identifies and quantifies such proteins in serum and plasma at the low nanogram per milliliter (ng/mL) concentration range. This protocol is intended to give an introduction to SRM-based targeted mass spectrometry with a special focus on the validation of biomarker candidates.
Frontispiece: Tetraloop‐like Geometries Could Form the Basis of the Catalytic Activity of the Most Ancient Ribooligonucleotides (2015)

Oligonucleotides In their Full Paper on page 3596 ff., J. E. Šponer et al. report on the results of molecular dynamics (MD) simulations used to investigate whether tetraloop-like overhang geometries might give rise to ribozyme-like activity in short Watson–Crick complementary oligoG/oligoC sequences. Their results demonstrate that the studied tetraloop-like overhang geometries are able to stabilize the 2′- and 3′-OH groups of the acceptor ribose in the vicinity of the phosphate of the donor strand for several tens to hundreds of nanoseconds, which is entirely sufficient for the required transphosphorylation reactions to proceed.
Penetration of Human Eggs by Human Spermatozoa in vitro (1978)

The timing of sperm penetration through the zona pellucida, and fertilization of human eggs had received little attention in the literature. Edwards et al. (1969) inseminated eggs matured in vitro with ejaculated spermatozoa which had been washed and found that spermatozoa did not penetrate the zona pellucida earlier than 7 h after insemination. A similar time interval between insemination and zona penetration by spermatozoa has been reported by others (Bavister et al., 1969; Overstreet and Hembree, 1976). This time interval has been considered to represent the time required for sperm capacitation, acrosome reaction and passage of the reacted spermatozoa through the zona pellucida (Austin, 1969; Austin et al., 1973). We report here that under our experimental conditions, sperm penetration into human eggs can occur much faster than previously reported.
The ispB gene encoding octaprenyl diphosphate synthase is essential for growth of Escherichia coli (1997)

The Escherichia coli ispB gene encoding octaprenyl diphosphate synthase is responsible for the synthesis of the side chain of isoprenoid quinones. We tried to construct an E. coli ispB-disrupted mutant but could not isolate the chromosomal ispB disrupted mutant unless the ispB gene or its homolog was supplied on a plasmid. The chromosomal ispB disruptants that harbored plasmids carrying the ispB homologs from Haemophilus influenzae and Synechocystis sp. strain PCC6803 produced mainly ubiquinone 7 and ubiquinone 9, respectively. Our results indicate that the function of the ispB gene is essential for normal growth and that this function can be substituted for by homologs of the ispB gene from other organisms that produce distinct forms of ubiquinone.
Late Mortality and Causes of Death among Long-Term Survivors after Allogeneic Stem Cell Transplantation (2016)

We sought to assess the late mortality risks and causes of death among long-term survivors of allogeneic hematopoietic stem cell transplantation (HCT). The cases of 11,047 relapse-free survivors of a first HCT at least 2 years after HCT were analyzed. Standardized mortality ratios (SMR) were calculated and specific causes of death were compared with those of the Japanese population. Among relapse-free survivors at 2 years, overall survival percentages at 10 and 15 years were 87% and 83%, respectively. The overall risk of mortality was significantly higher compared with that of the general population. The risk of mortality was significantly higher from infection (SMR = 57.0), new hematologic malignancies (SMR = 2.2), other new malignancies (SMR = 3.0), respiratory causes (SMR = 109.3), gastrointestinal causes (SMR = 3.8), liver dysfunction (SMR = 6.1), genitourinary dysfunction (SMR = 17.6), and external or accidental causes (SMR = 2.3). The overall annual mortality rate showed a steep decrease from 2 to 5 years after HCT; however, the decrease rate slowed after 10 years but was still higher than that of the general population at 20 years after HCT. SMRs in the earlier period of 2 to 4 years after HCT and 5 years or longer after HCT were 16.1 and 7.4, respectively. Long-term survivors after allogeneic HCT are at higher risk of mortality from various causes other than the underlying disease that led to HCT. Screening and preventive measures should be given a central role in reducing the morbidity and mortality of HCT recipients on long-term follow-up.
ShiDianNao (2015)

In recent years, neural network accelerators have been shown to achieve both high energy efficiency and high performance for a broad application scope within the important category of recognition and mining applications.
A Fault-Tolerant Data Acquisition Scheme with MDS and Dynamic Clustering in Energy Internet (2018)

Energy Internet (EI) is regarded as a promising method to solve the energy shortage and improve the efficiency of renewable energy. It demands frequent exchanges of data flow and energy flow, which puts forward strict requests for data veracity and availability. As a result, a reliable and robust data network is critical to realize the promises of EI. This paper introduces the fog nodes with computing ability to enable erasure coding based fault-tolerant techniques so that the data availability can be guaranteed. However, the distributed and irregular deployment of EI nodes have brought many challenges to maximum distance separable code (MDS) based fault-tolerant schemes. As a result, this paper investigates the design of encoding parameters and clustering mechanism to adjust the flexible situations. And then, we propose a novel fault-tolerant mechanism based on MDS and dynamic clustering to improve the data availability. Numerical simulation results show our scheme works better than the backup and traditional MDS based schemes with determined cluster size.
Hypothetical Case of Pancreatitis During a Long Duration Lunar Mission (2019)

<b>INTRODUCTION:</b> This peer-reviewed hypothetical case was written to help the readership understand the challenges of dealing with quite common yet very debilitating diseases during space missions. This scenario is based on a real case of an astronaut who had previously flown in space and developed acute pancreatitis after being dehydrated from wilderness survival training. Many astronauts experience life threatening illness and injury before and after flight and, as space missions become longer and more remote, it is only a matter of time before these events occur during a mission. Future exploration space mission planners need to anticipate that these common catastrophic medical events will occur.<b>CASE REPORT:</b> You are a flight surgeon working on console at Mission Control during a long duration lunar mission. You have completed extensive space, military, and civilian aerospace medical training to address almost any anticipated medical event and can summon advice from medical experts located around the world. One crewmember is a 37-yr-old man who just completed an 8-h moonwalk and now describes a constant 7/10 dull epigastric pain with radiation around the left flank to his back. His pain is getting progressively worse and he is presently sitting with his trunk flexed and knees drawn up in extreme distress. Working with the flight director, you must decide in the next 12 h whether to recommend the multibillion-dollar mission be aborted and have the crew return to Earth immediately to save your patient.<b>Hamilton DR, McBeth PB, Greene MR, Kirkpatrick AW, Ball CG. <i>Hypothetical case of pancreatitis during a long duration lunar mission</i>. Aerosp Med Hum Perform. 2019; 90(6):570-578.</b>
Anti-cardiolipin antibody from a patient with antiphospholipid syndrome (APS) recognizes only an epitope expressed by cardiolipin/beta 2-glycoprotein-I (beta 2GPI) complex and induces APS. (2000)

APS is a unique syndrome that is characterized by a diversity of pathogenic anti-phospholipid antibodies which may explain the diversity of clinical manifestations reported in patients.
Focussing of Electron Beam from Biased Electron Gun. A Study with Oxide-Cored Cathode as Well as Tungsten Hair-Pin Filament. (1965)

Various characteristics of electron beam (beam diameter, total current, brightness, etc.) from electron guns such as used in electron microscopes and other equipments were studied systematically. The present paper describes the general results which are independent of detailed design of electron guns. It was found that the image of the tip of cathode is formed on a plane at a certain bias voltage. At this bias voltage, the brightness measured on the plane takes maximum value which agrees with the theoretical value. It was made clear that the decrease of brightness from the maximum value is mainly due to the finite size of apertures used for the measurement. Near the cut-off voltage, space charge limitation also makes the brightness lower. These results are against the conclusions of Haine &amp; Einstein. Nature of the so-called hollow beam was studied. This is due to electrons from the side surface of cathode. Thus it does not appear for oxide-cored cathode.
Imaging the Met Receptor Tyrosine Kinase (Met) and Assessing Tumor Responses to a Met Tyrosine Kinase Inhibitor in Human Xenograft Mouse Models with a [99mTc] (AH-113018) or CY 5** (AH-112543) Labeled Peptide (2015)

Developing an imaging agent targeting the hepatocyte growth factor receptor protein (Met) status of cancerous lesions would aid in the diagnosis and monitoring of Met-targeted tyrosine kinase inhibitors (TKIs). A peptide targeting Met labeled with [(99m)Tc] had high affinity in vitro (Kd = 3.3 nM) and detected relative changes in Met in human cancer cell lines. In vivo [(99m)Tc]-Met peptide (AH-113018) was retained in Met-expressing tumors, and high-expressing Met tumors (MKN-45) were easily visualized and quantitated using single-photon emission computed tomography or optical imaging. In further studies, MKN-45 mouse xenografts treated with PHA 665752 (Met TKI) or vehicle were monitored weekly for tumor responses by [(99m)Tc]-Met peptide imaging and measurement of tumor volumes. Tumor uptake of [(99m)Tc]-Met peptide was significantly decreased as early as 1 week after PHA 665752 treatment, corresponding to decreases in tumor volumes. These results were comparable to Cy5**-Met peptide (AH-112543) fluorescence imaging using the same treatment model. [(99m)Tc] or Cy5**-Met peptide tumor uptake was further validated by histologic (necrosis, apoptosis) and immunoassay (total Met, p Met, and plasma shed Met) assessments in imaged and nonimaged cohorts. These data suggest that [(99m)Tc] or Cy5**-Met peptide imaging may have clinical diagnostic, prognostic, and therapeutic monitoring applications.
Preparation and Evaluation of GAC-Based Iron-Containing Adsorbents for Arsenic Removal (2005)

Granular activated carbon-based, iron-containing adsorbents (As-GAC) were developed for effective removal of arsenic from drinking water. Granular activated carbon (GAC) was used primarily as a supporting medium for ferric iron that was impregnated by ferrous chloride (FeCl2) treatment, followed by chemical oxidation. Sodium hypochlorite (NaClO) was the most effective oxidant, and carbons produced from steam activation of lignite were most suitable for iron impregnation and arsenic removal. Two As-GAC materials prepared by FeCl2 treatment (0.025 -0.40 M) of Dacro 20 x 50 and Dacro 20 x 40LI resulted in a maximum impregnated iron of 7.89% for Dacro 20 x 50 and 7.65% for Dacro 20 x 40Ll. Nitrogen adsorption-desorption analyses showed the BET specific surface area, total pore volume, porosity, and average mesoporous diameter all decreased with iron impregnation, indicating that some micropores were blocked. SEM studies with associated EDS indicated that the distribution of iron in the adsorbents was mainly on the edge of As-GAC in the low iron content (approximately 1% Fe) sample but extended to the center at the higher iron content (approximately 6% Fe). When the iron content was > approximately 7%, an iron ring formed at the edge of the GAC particles. No difference in X-ray diffraction patterns was observed between untreated GAC and the one with 4.12% iron, suggesting that the impregnated iron was predominantly in amorphous form. As-GAC could remove arsenic most efficiently when the iron content was approximately 6%; further increases of iron decreased arsenic adsorption. The removal of arsenate occurred in a wide range of pH as examined from 4.4 to 11, but efficiency was decreased when pH was higher than 9.0. The presence of phosphate and silicate could significantly decrease arsenate removal at pH > 8.5, while the effects of sulfate, chloride, and fluoride were minimal. Column studies showed that both As(V) and As(III) could be removed to below 10 microg/L within 6000 empty bed volume when the groundwater containing approximately 50 microg/L of arsenic was treated.
Pyrazole compound BPR1P0034 with potent and selective anti-influenza virus activity (2010)

To the best of our knowledge, BPR1P0034 is the first pyrazole-based anti-influenza compound ever identified and characterized from high throughput screening to show potent (sub-microM) antiviral activity. We conclude that BPR1P0034 has potential antiviral activity, which offers an opportunity for the development of a new anti-influenza virus agent.
Cooling-induced shape memory effect and inverse temperature dependence of superelastic stress in Co2Cr(Ga,Si) ferromagnetic Heusler alloys (2013)

Normally, shape memory effect (SME) is obtained by the reverse martensitic transformation, therefore only induced by heating a sample from the deformed martensite phase. In this study, we report a phenomenon of cooling-induced SME, observed in a Co2Cr(Ga,Si) Heusler alloy, where the normal heating-induced SME can be obtained at the same time. The cooling-induced SME is attributed to an abnormal martensitic transformation in Co2Cr(Ga,Si) Heusler alloy. Moreover, an inverse temperature dependence of superelastic stress was also observed. The discoveries of these phenomena provide application possibilities for shape memory alloys, especially at low temperatures.