gebhart/patrepeval huggingface dataset:
Visualizing Multidimensional Data with Glyph SPLOMs (2014)

Abstract Scatterplot matrices or SPLOMs provide a feasible method of visualizing and representing multi‐dimensional data especially for a small number of dimensions. For very high dimensional data, we introduce a novel technique to summarize a SPLOM, as a clustered matrix of glyphs, or a Glyph SPLOM. Each glyph visually encodes a general measure of dependency strength, distance correlation, and a logical dependency class based on the occupancy of the scatterplot quadrants. We present the Glyph SPLOM as a general alternative to the traditional correlation based heatmap and the scatterplot matrix in two examples: demography data from the World Health Organization (WHO), and gene expression data from developmental biology. By using both, dependency class and strength, the Glyph SPLOM illustrates high dimensional data in more detail than a heatmap but with more summarization than a SPLOM. More importantly, the summarization capabilities of Glyph SPLOM allow for the assertion of “necessity” causal relationships in the data and the reconstruction of interaction networks in various dynamic systems.
Synthesis and functionalization of protease-activated nanoparticles with tissue plasminogen activator peptides as targeting moiety and diagnostic tool for pancreatic cancer (2016)

The targeted NPs indicate a fast and enhanced deposition of NPs in the murine tumor models. The CAN-Mag@PNPs-PEG-REGAcp-PEG/tPA-pep1<sub>Lac</sub> interlocking steps strategy of NPs delivery and deposition in pancreatic tumor is promising.
Spatial Arrangement and Biofertilizers Enhance the Performance of Legume—Millet Intercropping System in Rainfed Areas of Southern India (2021)

Intercropping is a well-established practice to enhance the yield in low-input agriculture, and beneficial microbes such as arbuscular mycorrhizal fungi (AMF) combined with plant growth promoting rhizobacteria are being used as an effective and sustainable measure to improve yields. In this study, we tested if biofertilizers can not only enhance the yield of crops in monoculture as has previously been demonstrated but can also enhance the yield of intercropping systems. We hypothesized that because AMF can form common mycorrhizal networks (CMN) that can transfer nutrients and water between different plant species, biofertilization can balance belowground competition between crop species and promote thus overall yields in intercropping systems. In our study, we used a pigeon pea (PP)—finger millet (FM) intercropping system that we grew for two consecutive growing seasons (2016/17 and 2017/18) at two contrasting sites in Bengaluru and Kolli Hills, India. We also tested if the spatial arrangement (i.e., different arrangement of component plants with similar plant density in intercropping system) of intercropped plants, using either a row-wise or a mosaic design, influences the effect of biofertilizers on yield and water relations of the PP-FM intercropping system. Our results demonstrate that intercropping can improve the straw and grain yield of PP and FM compared to the respective monocultures and that intercropping effects vary depending on the site characteristic such as climate and soil type. The spatial arrangement of component plants affected the total, straw, and grain biomass in intercropping treatments, but this effect also varied across sites. Most importantly, the results from the 2017/18 growing season clearly demonstrated a positive effect of biofertilizer on biomass yield, and this effect was irrespective of site, spatial arrangement, mixed or monoculture. Our study therefore shows that yield increase in intercropping systems can further be improved through the application of biofertilizers.
Surface properties of mixed Cu(II)—tetraalkylammonium montmorillonites (1975)

Abstract Initial exchange of Cu(II)-montmorillonite by tetrapropylammonium (TPA) or tetramethylammonium (TMA) ions results in segregation of different ions in randomly interstratified layers, with particular preference for TPA over Cu(II) during exchange. More complete exchange reverses this preference and both Cu(II)-TPA and Cu(II)-TMA clays become more homogeneous. The copper ions of the homogeneous Cu(II)-TPA clays are not fully hydrated while the TMA ions have less effect than TPA on the hydration of copper, probably a result of the smaller radius and higher hydration energy of TMA. Methods of X-ray diffraction, thermogravimetric analysis, BET surface area determinations, as well as infrared and electron spin resonance spectroscopy, are used in supplying evidence of cation distribution and hydration properties of these clays. Definite changes in the properties of hydrated copper when associated with tetraalkylammonium ions on the clay surface are indicated.
Xanthurenic acid 8-O-beta-D-glucoside, a novel tryptophan metabolite in eye-color mutants of Drosophila melanogaster. (1985)

An unknown fluorescent metabolite has been isolated from heads of eye-color mutants of Drosophila melanogaster. Only a few mutations cause it to accumulate, viz. cardinal (cd), dark red brown (drb), Henna-recessive (Hnr), purple (pr), Punch2 (Pu2), Punch-Grape (PuGr), and scarlet (st). After purification by ion-exchange chromatography, the spectroscopic, chemical, and enzymatic analyses revealed that it is a novel quinoline derivative: xanthurenic acid 8-O-beta-D-glucoside. Feeding experiments suggest that this glucoside is synthesized from 3-hydroxykynurenine and that free xanthurenic acid is not a precursor. The results from the analysis for its occurrence in double mutants, together with the fact that xanthurenic acid 8-glucoside share the same precursor as xanthurenic acid and xanthommatin, suggest that xanthurenic acid 8-glucoside formation is closely related to the regulation of the last step in the biosynthesis of xanthommatin.
Wireless, fully implantable cardiac stimulation and recording with on-device computation for closed-loop pacing and defibrillation (2022)

Monitoring and control of cardiac function are critical for investigation of cardiovascular pathophysiology and developing life-saving therapies. However, chronic stimulation of the heart in freely moving small animal subjects, which offer a variety of genotypes and phenotypes, is currently difficult. Specifically, real-time control of cardiac function with high spatial and temporal resolution is currently not possible. Here, we introduce a wireless battery-free device with on-board computation for real-time cardiac control with multisite stimulation enabling optogenetic modulation of the entire rodent heart. Seamless integration of the biointerface with the heart is enabled by machine learning-guided design of ultrathin arrays. Long-term pacing, recording, and on-board computation are demonstrated in freely moving animals. This device class enables new heart failure models and offers a platform to test real-time therapeutic paradigms over chronic time scales by providing means to control cardiac function continuously over the lifetime of the subject.
Power Electronics Thermal Control (Presentation) (2010)

Thermal management plays an important part in the cost of electric drives in terms of power electronics packaging. Very promising results have been obtained by using microporous coatings and skived surfaces in conjunction with single-phase and two-phase flows. Sintered materials and thermoplastics with embedded fibers show significant promise as thermal interface materials, or TIMs. Appropriatecooling technologies depend on the power electronics package application and reliability.
METHODS AND COMPOSITIONS FOR OBTAINING USEFUL PLANT TRAITS (2020)

The present invention provides methods for obtaining plants that exhibit useful traits by perturbation of plastid function in plant rootstocks and grafting the rootstocks to scions. Methods for identifying genetic loci that provide for useful traits in plants and plants produced with those loci are also provided. In addition, plants that exhibit the useful traits, parts of the plants including seeds, and products of the plants are provided as well as methods of using the plants. Recombinant DNA vectors and transgenic plants comprising those vectors that provide for plastid perturbation are also provided.
Response to “Comment on ‘Relative Diffusivities of Bound and Unbound Protein Can Control Chemotactic Directionality’” (2022)

ADVERTISEMENT RETURN TO ISSUEPREVCommentNEXTORIGINAL ARTICLEThis notice is a correctionResponse to "Comment on 'Relative Diffusivities of Bound and Unbound Protein Can Control Chemotactic Directionality'"Niladri Sekhar MandalNiladri Sekhar MandalDepartment of Chemical Engineering, Pennsylvania State University, University Park, Pennsylvania 16802, United StatesMore by Niladri Sekhar Mandal and Ayusman Sen*Ayusman SenDepartment of Chemical Engineering and Department of Chemistry, Pennsylvania State University, University Park, Pennsylvania 16802, United States*Email: [email protected]More by Ayusman Senhttps://orcid.org/0000-0002-0556-9509Cite this: Langmuir 2022, 38, 8, 2748Publication Date (Web):February 18, 2022Publication History Received24 December 2021Published online18 February 2022Published inissue 1 March 2022https://pubs.acs.org/doi/10.1021/acs.langmuir.1c03446https://doi.org/10.1021/acs.langmuir.1c03446correctionACS PublicationsCopyright © 2022 American Chemical Society. This publication is available under these Terms of Use. Request reuse permissions This publication is free to access through this site. Learn MoreArticle Views1122Altmetric-Citations-LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail PDF (559 KB) Get e-AlertscloseSUBJECTS:Diffusion,Kinetic modeling,Peptides and proteins,Surface interactions,Transport properties Get e-Alerts
Genetics and molecular biology: identifying adipocytes and their origin (2008)

Institute of Biomedicine/Anatomy, University of Helsinki, Helsinki, Finland Correspondence to Elina Ikonen, Institute of Biomedicine/Anatomy, University of Helsinki, Haartmaninkatu 8, Helsinki 00014, Finland Tel: +358 0 9 19125277; fax: +358 0 9 19125261; e-mail: [email protected]
ChemInform Abstract: ADDITION VON RADIKALEN AN UNGESAETTIGTE SYST. 18. MITT. RADIKALADDITION AN 1,3,3,3‐TETRAFLUOR‐PROPEN (1970)

Abstract Durch photochemische Reaktion des Halogenmethans (I) mit dem Propen (II) erhält man in guten Ausbeuten die Addukte (III) und (IV) im Verhältnis 75 : 25. Das Heptafluorbutan (III) liegt als 2:1‐Gemisch der erythro‐ und threo‐Form vor; beide Formen liefern bei Behandlung mit KOH das Hexafluorbutin (V) und das trans‐Heptafluorbuten (VI).
Generalized impedance boundary conditions in scattering (1991)

The authors present generalized surface impedance conditions that improve medium characterization. One of the most common conditions that is often used to simulate a dielectric coating is the standard impedance boundary condition, and the improved boundary condition discussed can be viewed as a generalization of this, distinguished by the presence of higher-order derivatives of the field. By virtue of the derivatives, the conditions are less local in character, and the additional degrees of freedom can be used to better simulate the material properties of a surface. Following a review of the standard impedance condition, the new conditions are introduced. Several forms are presented, each with coefficients which are functions of the geometry and material properties of the surface. The applications of these to a variety of scattering problems are then discussed.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">&gt;</ETX>
Distribution and Movement of the Oriental Cockroach (Orthoptera: Blattidae) Around Apartment Buildings (1987)

Journal Article Distribution and Movement of the Oriental Cockroach (Orthoptera: Blattidae) Around Apartment Buildings Get access Ellen M. Thoms, Ellen M. Thoms 1 Department of Entomology, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061 1Current address: Dow Chemical, 5100 W. Kennedy Blvd., Suite 450, Tampa, FL 33609. Search for other works by this author on: Oxford Academic PubMed Google Scholar William H. Robinson William H. Robinson Department of Entomology, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061 Search for other works by this author on: Oxford Academic PubMed Google Scholar Environmental Entomology, Volume 16, Issue 3, 1 June 1987, Pages 731–737, https://doi.org/10.1093/ee/16.3.731 Published: 01 June 1987 Article history Received: 09 June 1986 Accepted: 18 February 1987 Published: 01 June 1987
Abstract P048: The Association Between Apparent Treatment Resistant Hypertension and Low Mental and Physical Functioning, Depressive Symptoms, and Stress. (2014)

Apparent treatment resistant hypertension (aTRH) is associated with an increased risk of cardiovascular events. There are few data on the association between aTRH, health-related quality of life and psychological well-being. In the REasons for Geographic and Racial Differences in Stroke (REGARDS) study (n=30,239), we evaluated the association between aTRH and low health-related quality of life, high stress, and depressive symptoms. Also, among those with aTRH we assessed the association of these psychological factors with all-cause mortality. Low mental and physical functioning were defined by SF-12 scores in the lowest quintile for the mental and physical component scores, respectively. High stress was defined as having a Cohen’s Perceived Stress score ≥ 7. Depressive symptoms were defined as having a Center for Epidemiologic Studies Depression score ≥ 4. aTRH was defined as systolic blood pressure ≥ 140 mmHg or diastolic blood pressure ≥ 90 mmHg despite the use of 3 classes of antihypertensive medication or use of 4 or more classes of antihypertensive medication regardless of blood pressure level. Of the 13,961 REGARDS participants with hypertension included in this analysis 1,954 (14.0%) had aTRH. Low physical functioning was more common among those with versus without aTRH (Table 1). The prevalence of low mental functioning, high stress and depressive symptoms was not significantly different between those with and without aTRH. Among those with aTRH, low physical functioning and depressive symptoms were associated with all-cause mortality after multivariable adjustment [adjusted hazard ratio (95% CI), 1.34 (1.07-1.67); p=0.010 and 1.38 (1.04-1.85); p=0.029, respectively]. In contrast, low mental functioning and high stress were not associated with all-cause mortality. In summary, participants with versus without aTRH have a higher prevalence of low physical functioning, which was also associated with a higher mortality rate.
A Benchmark for the Use of Topic Models for Text Visualization Tasks (2022)

Based on the assumption that semantic relatedness between documents is reflected in the distribution of the vocabulary, topic models are a widely used class of techniques for text analysis tasks. The application of topic models results in concepts, the so-called topics, and a high-dimensional description of the documents. For visualization tasks, they can be projected onto a lower-dimensional space using dimensionality reduction techniques. Though the quality of the resulting point layout mainly depends on the chosen topic model and dimensionality reduction technique, it is unclear which particular combinations are suitable for displaying the semantic relatedness between the documents. In this work, we propose a benchmark comprising various datasets, layout algorithms and their hyperparameters, and quality metrics for conducting an empirical study.
Document-Driven Design for Distributed CAD Services in Service-Oriented Architecture (2005)

Current CAD systems only support interactive geometry generation, which is not ideal for distributed engineering services in enterprise-to-enterprise collaboration with a generic thin-client service-oriented architecture. This paper proposes a new feature-based modeling mechanism, document-driven design, to enable batch mode geometry construction for distributed CAD systems. A semantic feature model is developed to represent informative and communicative design intent. Feature semantics is explicitly captured as trinary relation, which provides good extensibility and prevents semantics loss. Data interoperability between domains is enhanced by schema mapping and multi-resolution semantics. This mechanism aims to enable asynchronous communication in distributed CAD environments with case of design alternative evaluation and reuse, reduced human errors, and improved system throughput and utilization.
Test Methods for Determining Asphaltene Stability in Crude Oils (2003)

Abstract The high cost of remediating asphaltene deposition in crude oil production and processing has necessitated the development of test methods for determining the stability of asphaltenes in crude oils. In the current work, the stability of asphaltenes in crude oils of varying API gravity is predicted using the Oliensis Spot Test, the Colloidal Instability Index, the Asphaltene–Resin ratio, and a solvent titration method with NIR solids detection. The test methods are described in detail and experimental data from them presented. The experimental stability data were validated via correlation with field deposition data. The effectiveness of the various tests as predictors of the stability of asphaltenes in oils is discussed. The Colloidal Instability Index and the solvent titration method were found to predict a crude oil's propensity towards asphaltene precipitation better than both the Asphaltene–Resin ratio and the Oliensis Spot Test. For oils with low asphaltene content where most stability tests fail, live oil depressurization is proposed as the test for predicting the stability of asphaltenes. Keywords: ArphaltenesResinsCrude oilStabilityBitumenDepositsColloids Acknowledgments My sincere thanks go to the Shell Westhollow Technology Center asphaltene team for their ideas and contributions to this work. My thanks also go to the management of Baker Petrolite for permission to publish this paper.
The wavenumber algorithm for full-matrix imaging using an ultrasonic array (2008)

Ultrasonic imaging using full-matrix capture, e.g., via the total focusing method (TFM), has been shown to increase angular inspection coverage and improve sensitivity to small defects in nondestructive evaluation. In this paper, we develop a Fourier-domain approach to full-matrix imaging based on the wavenumber algorithm used in synthetic aperture radar and sonar. The extension to the wavenumber algorithm for full-matrix data is described and the performance of the new algorithm compared with the TFM, which we use as a representative benchmark for the time-domain algorithms. The wavenumber algorithm provides a mathematically rigorous solution to the inverse problem for the assumed forward wave propagation model, whereas the TFM employs heuristic delay-and-sum beamforming. Consequently, the wavenumber algorithm has an improved point-spread function and provides better imagery. However, the major advantage of the wavenumber algorithm is its superior computational performance. For large arrays and images, the wavenumber algorithm is several orders of magnitude faster than the TFM. On the other hand, the key advantage of the TFM is its flexibility. The wavenumber algorithm requires a regularly sampled linear array, while the TFM can handle arbitrary imaging geometries. The TFM and the wavenumber algorithm are compared using simulated and experimental data.
Urinary symptoms, quality of life and sexual function in patients with benign prostatic hypertrophy before and after prostatectomy: a prospective study (2003)

The combined use of the IPSS, ICS-"BPH" and IIEF allows an evaluation of the relationship between age, prostatic symptoms and sexual dysfunction. Age may be considered both a direct and indirect (BPH-related) prognostic factor for sexual activity. Suprapubic prostatectomy resolves obstructive symptoms, and maintains sexual desire, overall sexual satisfaction and an improvement in quality of life. However, irritative symptoms, erection, orgasm and sexual intercourse satisfaction are not significantly altered.
Cell search for 3GPP W-CDMA/FDD with chip clock shift and non-ideal sampling (2002)

This paper presents the performance of cell search for the 3GPP W-CDMA/FDD (wideband code division multiple access, frequency division duplex) system under the effects of non-ideal sampling and clock drift. Three new cell search algorithms are proposed and compared to the conventional one. Computer simulations show that the adverse effects of the nonideal sampling and clock drift can be removed largely by the proposed schemes.
Zika Virus Disease: A Review (2021)

The mosquito-borne Zika virus (ZIKV) belongs to the Flavivirus genus, which is part of the Flaviviridae family. ZIKV is spread by various mosquito species, including Aedes africanus, Aedes aegypti, Aedes albopictus, and Aedes hensilli, just like other flaviviruses.
Liquid chromatography on a porous polystyrene-divinylbenzene support. Separation of nitro- and chlorophenols (1973)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTLiquid chromatography on a porous polystyrene-divinylbenzene support. Separation of nitro- and chlorophenolsMerlin D. Grieser and Donald J. PietrzykCite this: Anal. Chem. 1973, 45, 8, 1348–1353Publication Date (Print):July 1, 1973Publication History Published online1 May 2002Published inissue 1 July 1973https://pubs.acs.org/doi/10.1021/ac60330a019https://doi.org/10.1021/ac60330a019research-articleACS PublicationsRequest reuse permissionsArticle Views139Altmetric-Citations55LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts