gebhart/patrepeval huggingface dataset:
Platelet-activating factor and arachidonic acid metabolites in psoriatic inflammation. (1996)

Platelet-activating factor (PAF), as well as PAF acetylhydrolase (PAF-AH) activity in the peripheral blood plasma of patients with psoriasis and palmoplantar pustolosis, was measured with a radioimmunoassay technique, and compared with leukotriene (LT) B4, LTC4, LTD4 and E4 (LTD4/E4), thromboxane (TX) B2 and prostaglandin (PG) E2 levels. In a normal healthy group (n = 12) PAF level was 25.9 +/- 6.5 pg/0.1 ml plasma (mean +/- standard error of the mean: SEM), and this was elevated in patients with psoriasis (68.1 +/- 11.8, n = 25, P < 0.01), without a change in the PAF-AH level. LTB4 showed a similar increase (115.0 +/- 21.6 pg/ml vs. 68.2 +/- 11.8 pg/ml, P < 0.05), while TXB2 and PGE2 showed insignificant (P > 0.05) changes. LTC4 and LTD4/E4 were around the level of the limit of detection. Patients with palmoplantar pustulosis (n = 33) demonstrated similar, but milder and statistically insignificant, increases in PAF, LTB4, TXB2 and PGE2 levels. Modulation of the mediator levels before and after treatment was compared in 16 patients with psoriasis and 11 with palmoplantar pustulosis. PAF in psoriasis significantly decreased after treatment (70.9 +/- 17.1 to 25.1 +/- 5.5, P < 0.05) and this was moderately correlated (r = 0.298) with clinical improvement as indicated by the psoriasis area and severity index (38.5 +/- 7.5 to 10.9 +/- 4.2, P < 0.01). TXB2 (180.2 +/- 100.4 to 34.1 +/- 13.5), PGE2 (3.7 +/- 0.7 to 2.9 +/- 0.5) and LTB4 (120.1 +/- 31.1 to 84.2 +/- 8.2), in psoriasis, mildly decreased without statistical significance. Patients with palmoplantar pustulosis demonstrated a similar decrease in all mediators without statistical significance. The results obtained suggest a role of PAF in psoriasis. As the priming effects of PAF have been shown, for leucocytes and endothelial cells, to enhance their inflammatory response, we assume that PAF has roles in the acute phase of psoriatic and leucotactic inflammation.
Gain-transparent SOA-switch for high-bitrate OTDM add/drop multiplexing (1999)

We report on an all-optical interferometric optical time-division multiplexing switch that exhibits high linearity, high-switching contrast, low noise, wide bandwidth, and low crosstalk. The key element of the gain-transparent switch is a semiconductor optical amplifier (SOA), which is transparent for the data signal. However, the injection of optical control pulses in the gain wavelength region of the SOA leads to index modulations at the wavelength of the data. This variation of the refractive index can be used for interferometric switching. In the application as add/drop multiplexer, the switch has the inherent advantage of leaving the nonswitched pulses undisturbed.
Human MUC1 Mucin: A Multifaceted Glycoprotein (2000)

Human MUC1 mucin, a membrane-bound glycoprotein, is a major component of the ductal cell surface of normal glandular cells. MUC1 is overexpressed and aberrantly glycosylated in carcinoma cells. The role MUC1 plays in cancer progression represents two sides of one coin: on the one hand, loss of polarity and overexpression of MUC1 in cancer cells interferes with cell adhesion and shields the tumor cell from immune recognition by the cellular arm of the immune system, thus favoring metastases; on the other hand, MUC1, in essence a self-antigen, is displaced and altered in malignancy and induces immune responses. Tumor-associated MUC1 has short carbohydrate sidechains and exposed epitopes on its peptide core; it gains access to the circulation and comes into contact with the immune system provoking humoral and cellular immune responses. Natural antibodies to MUC1 present in the circulation of cancer patients may be beneficial to the patient by restricting tumor growth and dissemination: early stage breast cancer patients with a humoral response to MUC1 have a better disease-specific survival. Several MUC1 peptide vaccines, differing in vectors, carrier proteins and adjuvants, have been tested in phase I clinical trials. They are capable of inducing predominantly humoral responses to the antigen, but evidence that these immune responses may be effective against the tumor in humans is still scarce.
Sub-40-fs pulses with 18-W average power from a passively mode-locked thin disk Yb: YAG laser with nonlinear fiber compression (2003)

By combining a passively mode-locked high-power laser with a large mode area holey fiber for nonlinear compression, we generated 33-fs pulses with 18-W average power. The output beam is linearly polarized and close to diffraction-limited.
Amino Acid Ester Prodrugs of the Antiviral Agent 2-Bromo-5,6-dichloro-1-(β-d-ribofuranosyl)benzimidazole as Potential Substrates of hPEPT1 Transporter (2005)

Amino acid ester prodrugs of 2-bromo-5,6-dichloro-1-(beta-d-ribofuranosyl)benzimidazole (BDCRB) were synthesized and evaluated for their affinity for hPEPT1, an intestinal oligopeptide transporter. Assays of competitive inhibition of [(3)H]glycylsarcosine (Gly-Sar) uptake in HeLa/hPEPT1 cells by the amino acid ester prodrugs of BDCRB suggested their 2- to 4-fold higher affinity for hPEPT1 compared to BDCRB. Further, promoieties with hydrophobic side chains and l-configuration were preferred by the hPEPT1 transporter.
Realtime Generation of Multimodal Affective Sports Commentary for Embodied Agents (2007)

Autonomous, graphically embodied agents are a versatile platform for information presentation and user interaction. This thesis presents ERIC, a homogeneous agent framework that can be configured to provide real-time running commentary on a dynamic environment of many and frequent events. We have focused on knowledge reasoning with a world model, generating and expressing affect, and generating coherent natural language, synchronised with nonverbal modalities. The graphical and TTS output of the agent is provided by commercial systems. ERIC is currently implemented to commentate a simulated horse race and a multiplayer tank combat game. With minimal modification the system is configurable to provide commentary in any continuous dynamically changing environment; for example, it could commentate sports matches and computer games, or play the role of "tourist guide" during a self-guided tour of a city. An elaborate world model is deduced from limited input by an expert system implemented as rules in Jess. Natural language is generated using template-based NLG. Discourse coherence is maintained by requiring semantic relations between the forwardlooking and backward-looking centers of successive utterances. The agent uses a set of causal and belief relations to assign appraisals of emotion-eliciting conditions to facts in the world model based on goals and desires. These appraisals are used to generate an affective state according to the OCC cognitive model of emotions; the agent�s affect is expressed via his lexical choice, gestures and facial expressions. ERIC was designed to be domain-independent, homogeneous, behaviourally complex, reactive and affective. Domain-indepence was evaluated by comparing the effort required to implement the ERIC system with the effort required to re-implement the framework for another domain. Complexity, reactivity and affectivity were assessed by independent experts, whose reviews are presented.
Surgical repair of a peritoneopericardial diaphragmatic hernia in a pregnant dog (2006)

Abstract Objective: To describe the surgical repair and pre‐ and postoperative management of a peritoneopericardial diaphragmatic hernia (PPDH) in a pregnant dog. Case summary: A pregnant dog was presented for vomiting, lethargy, and pale mucous membranes. Pulsus paradoxus was noted on physical examination. The dog was diagnosed with a PPDH via thoracic radiographs, abdominal ultrasound, and an echocardiogram. The hernia was surgically repaired and the dog received supportive medical care until the puppies were old enough to be delivered via cesarean section. The mother and all puppies survived. New or unique information provided: This is the first report that describes the surgical repair and postoperative management of a PPDH in a pregnant dog.
Heterocyclic Steroids in the Antiinflammatory Series1 (1964)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTHeterocyclic Steroids in the Antiinflammatory Series1Helmut Mrozik, Paul Buchschacher, John Hannah, and John H. FriedCite this: J. Med. Chem. 1964, 7, 5, 584–589Publication Date (Print):September 1, 1964Publication History Published online1 May 2002Published inissue 1 September 1964https://pubs.acs.org/doi/10.1021/jm00335a002https://doi.org/10.1021/jm00335a002research-articleACS PublicationsRequest reuse permissionsArticle Views132Altmetric-Citations7LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts
Mesenchymal precursor cells in the blood of normal individuals (2000)

STATEMENT OF FINDINGS: Mesenchymal precursor cells found in the blood (BMPCs) of normal persons adhere to plastic and glass and proliferate logarithmically in DMEM-20% fetal calf serum (FCS) without growth factors. They form cells with fibroblast-like and stromal morphology, which is not affected by eliminating CD34, CD3, or CD14 cells. Osteogenic supplements (dexamethasone, ascorbic acid, and beta-glycerophosphate) added to the culture inhibited fibroblast formation, and BMPCs assumed the cuboidal shape of osteoblasts. After 5 days in supplemented medium, the elutriated cells displayed alkaline phosphatase (AP), and the addition of bone morphogenetic protein (BMP)2 (1 ng) doubled AP production (P < 0.04). Two weeks later, 30% of the cells were very large and reacted with anti-osteocalcin antibody. The same cultures also contained sudanophlic adipocytes and multinucleated giant cells that stained for tartrate-resistant acid phosphatase (TRAP) and vitronectin receptors. Cultured BMPCs immunostain with antibodies to vimentin, type I collagen, and BMP receptors, heterodimeric structures expressed on mesenchymal lineage cells. In addition, BMPCs stain with anti-CD105 (endoglin), a putative marker for bone-marrow mesenchymal stem cells (MSCs).
4-1BB-dependent inhibition of immunosuppression by activated CD4+CD25+ T cells (2003)

4-1BB (CD137) is a costimulatory molecule involved in the activation and survival of CD4, CD8, and natural killer cells. Although a great deal has been learned as to how 4-1BB-mediated signaling governs the immunity of conventional T cells, the functional role of 4-1BB in the context of CD4(+)CD25(+) regulatory T cell (Tr) activation is largely unknown. Using 4-1BB-intact and -deficient mice, we investigated the effect of the 4-1BB/4-1BB ligand pathway on the suppressive function of Tr cells. Our data indicate that although 4-1BB is expressed on Tr cells, its contribution to their proliferation is minimal. We also showed that signaling through the 4-1BB receptor inhibited the suppressive function of Tr cells in vitro and in vivo. It is interesting that anti-4-1BB-mediated but not anti-GITR-directed inhibition was more potent when Tr cells were preactivated. Collectively, these data indicate that 4-1BB signaling is critical in Tr cell immunity.
Expression of the hyaluronan receptor, CD44S, in epithelial ovarian cancer is an independent predictor of survival. (1999)

Most ovarian carcinomas present at advanced stage, principally as the result of dissemination to peritoneal sites. Standard CD44 (CD44S) is the principal receptor for hyaluronic acid, and in vitro and animal studies have suggested that the attachment of ovarian carcinoma cells to the peritoneal mesothelium involves the interaction between CD44S on ovarian carcinoma cells and hyaluronic acid on mesothelial surfaces. We, therefore, analyzed a series of ovarian carcinomas for the expression of CD44S by immunohistochemistry to see whether expression of this receptor by tumor cells correlated with clinicopathological factors and measures of patient outcome. Fifty-six fixed, paraffin-embedded primary epithelial ovarian tumors were immunostained with antibody to CD44S. Membrane staining was considered positive, and results were correlated with stage, grade, age, histology, and survival. Twenty-two (39%) tumors were positive for CD44S. There was no correlation between CD44 expression and histological type, grade, age, or stage. However, CD44 expression was significantly associated with survival in both univariate (P = 0.003) and multivariate (P = 0.006) analyses. These results support a role for CD44S expression in the spread of ovarian epithelial cancer and suggest that expression of this molecule is a significant independent predictor of survival in women with this disease.
Positive feedback loop and synergistic effects between hypoxia‐inducible factor‐2α and stearoyl–CoA desaturase‐1 promote tumorigenesis in clear cell renal cell carcinoma (2013)

Adapting to hypoxic stress is pivotal in tumor progression and determining tumor malignancy. The transcriptional factor hypoxia-inducible factor (HIF) is crucial in modulating tumorous hypoxic responses through altering cell energy metabolism, which includes the modification of glucose and lipid metabolism-associated gene expression. Stearoyl-CoA desaturase-1 (SCD1) is the main isoform of SCDs, the rate-limiting enzymes in the biosynthesis of monounsaturated fatty acids from saturated fatty acids, which is extensively activated in cancer progression. In this study, we found that SCD1 and HIF-2α were overexpressed in human clear cell renal cell carcinoma (ccRCC) tissues and ccRCC cell lines, and were upregulated in the 786-0 ccRCC cell line under hypoxia. Knockdown of SCD1 or HIF-2α impacted the other's expression. Enhancing SCD1 resulted in HIF-2α upregulation, which could be blocked by inhibiting the PI3K/Akt pathway. Deficiency of SCD1 or HIF-2α in 768-0 cells led to apoptosis, less colony formation ability, and decreased cell migration. More obvious effects were observed in 786-0 cells with double SCD1 and HIF-2α knockdown. These results indicate a PI3K/Akt-mediated loop between SCD1 and HIF-2α that mutually enhances their protein levels. Both SCD1 and HIF-2α are critical to promoting tumorigenesis by synergistically acting on maintaining cell survival, triggering cell migration, and enhancing the colony formation ability of cancer cells.
Diversity and structure of human T cell receptor delta chain genes in peripheral blood gamma/delta-bearing T lymphocytes. (1989)

We have investigated the diversity and repertoire of human TCR delta chain variable gene segments in the human peripheral blood CD4- CD8- (double-negative) population, using rearrangement and expression studies and sequence analyses. 20 TCR delta DNA clones were derived from the RNA of bulk-cultured double-negative T cells and their nucleotide sequences determined. These clones can be classified into six different V delta subfamilies. The distribution, however, was uneven in these cells, with 16 of 20 being derived from the V delta 1 (9) and V delta 2 (7) subfamilies. The remaining subfamilies, V delta 3, V delta 4, V delta 5, and V delta 6, were only represented by one clone each. The majority of these subfamilies seem to consist of a single member, in contrast with the closely linked V alpha subfamilies, which, in most cases, consist of multiple members. Our findings suggest that only a limited number of V delta genes are used in human peripheral blood double-negative T cells and that two major V delta subfamilies (V delta 1 and V delta 2) are used more frequently. Sequence comparison of our cDNA clones to V alpha clones indicates that there is no overlap in usage of V alpha and V delta gene segments, except for the V delta 4 (V alpha 6) subfamily. Comparison of the different V delta sequences suggests that the majority of the sequence diversity is concentrated in the junctions between V, D, and J segments and results from extensive N region diversity.
A Tutorial on the Receiving and Scattering Properties of Antennas (2009)

A tutorial discussion on the receiving and scattering properties of antennas is presented. The objective of this work is to provide a comprehensive tutorial overview of the subject, in conjunction with circuit calculations and numerical simulations that illustrate the fundamental concepts of how antennas behave as both receivers and scatterers of electromagnetic fields and power. The paper begins with a discussion of the basic concepts associated with antenna impedance, as these are fundamental to understanding the antenna's receiving and scattering properties, particularly over a wide range of frequencies, where the circuit properties of the antenna differ. The definitions of aperture efficiency, absorption efficiency, and the validity of using either a Thevenin or Norton equivalent circuit to determine both received and total scattered power are discussed. Circuit circulations and numerical simulations, determining both total received and scattered powers, are presented for a number of antennas, including a straight-wide dipole, a circular loop, a reflector-backed dipole, and a Yagi antenna. We show that Thevenin and Norton equivalent circuits have limited validity when used to determine the total power scattered by a basic antenna element such as the dipole and loop. For the general antenna, these equivalent circuit models are not valid for determining the total scattered power.
pH-Controlled Reversible Assembly of Peptide-Functionalized Gold Nanoparticles (2006)

The assembly/disassembly process of carboxylated peptide-functionalized gold nanoparticles (peptide-GNPs) was studied within the pH interval of 2.5 to 10. The assembly process was not well controlled at pH 2.5, leading to the formation of 3D structures of GNPs, whereas at pH 4 we observed controlled assembly with the formation of only a network of 1D chains. In the pH range of 2.5 to 4, the assembly proceeded with the formation of a combination of two extremes (i.e., having both 1D and 2D nanostructures). The assembly process was reversed on changing the pH of the medium to 10. The assembly/disassembly process was monitored using UV-vis spectroscopy and finally confirmed by TEM analysis. This assembly resulted from the intermolecular H-bonding between two carboxylic acid groups of peptides bound to the two adjacent GNPs and were confirmed by FTIR spectroscopy.
A 0.6-V Zero-IF/Low-IF Receiver With Integrated Fractional-N Synthesizer for 2.4-GHz ISM-Band Applications (2010)

Supply voltage reduction with process scaling has made the design of analog, RF and mixed mode circuits increasingly difficult. In this paper, we present the design of an ultra-low voltage, low power and highly integrated dual-mode receiver for 2.4-GHz ISM-band applications. The receiver operates reliably from 0.55-0.65 V and is compatible with commercial standards such as Bluetooth and ZigBee. We discuss the design challenges at low voltage supplies such as limited f <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">T</sub> for transistors and higher nonlinearities due to limited available signal swing, and present the architectural and circuit level design techniques used to overcome these challenges. The highly integrated receiver prototype chip contains RF front-end circuits, analog baseband circuits and the RF frequency synthesizer and was fabricated in a standard digital 90-nm CMOS process; it achieves a gain of 67 dB, noise figure of 16 dB, IIP <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">3</sub> of -10.5 dBm, synthesizer phase noise of - 127 dBc/Hz at 3-MHz offset, consumes 32.5 mW from 0.6 V and occupies an active area of 1.7 mm <sup xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sup> .
ERBB2 amplification in breast cancer analyzed by fluorescence in situ hybridization. (1992)

We illustrate the use of fluorescence in situ hybridization (FISH) for analysis of ERBB2 oncogene copy number, the level of amplification (here defined as the ratio of ERBB2 copy number to copy number of chromosome 17 centromeres), and the distribution of amplified genes in breast cancer cell lines and uncultured primary breast carcinomas. The relative ERBB2 copy number determined by FISH in 10 breast cancer cell lines correlated strongly with Southern blot results (r = 0.98) when probes for an identical reference locus were used in the two methods. Metaphase analysis of cell lines showed that amplified ERBB2 copies always occurred in intrachromosomal clusters but that the number and chromosomal location of these clusters varied among the cell lines. In interphase nuclei of primary tumors showing ERBB2 amplification (10/44), ERBB2 copies were seen as one to four clusters, also suggesting intrachromosomal localization. Regardless of the average level of amplification, all these tumors contained highly amplified cell subpopulations with at least 25, and sometimes more than 100, ERBB2 copies per cell. Tumors that did not show amplification by FISH (34/44) had an average of one to five ERBB2 copies scattered randomly in the nuclei and completely lacked cells with high copy levels. FISH results on primary tumors were concordant with slot blot results on amplification and with immunohistochemical detection of overexpression. Quantitative analysis of ERBB2 amplification by FISH may improve prognostic assessments based on the pattern of amplification and detection of heavily amplified tumor cell subpopulations.
High-Resolution Airborne UAV Imagery to Assess Olive Tree Crown Parameters Using 3D Photo Reconstruction: Application in Breeding Trials (2015)

The development of reliable methods for the estimation of crown architecture parameters is a key issue for the quantitative evaluation of tree crop adaptation to environment conditions and/or growing system. In the present work, we developed and tested the performance of a method based on low-cost unmanned aerial vehicle (UAV) imagery for the estimation of olive crown parameters (tree height and crown diameter) in the framework of olive tree breeding programs, both on discontinuous and continuous canopy cropping systems. The workflow involved the image acquisition with consumer-grade cameras on board a UAV and orthomosaic and digital surface model generation using structure-from-motion image reconstruction (without ground point information). Finally, geographical information system analyses and object-based classification were used for the calculation of tree parameters. Results showed a high agreement between remote sensing estimation and field measurements of crown parameters. This was observed both at the individual tree/hedgerow level (relative RMSE from 6% to 20%, depending on the particular case) and also when average values for different genotypes were considered for phenotyping purposes (relative RMSE from 3% to 16%), pointing out the interest and applicability of these data and techniques in the selection scheme of breeding programs.