gebhart/patrepeval huggingface dataset:
Analysis of pp60c-src in human colon carcinoma and normal human colon mucosal cells. (1987)

The tyrosine-specific protein kinase activity of pp60c-src molecules obtained from RIPA buffer lysates of human colon tumor-derived cell lines is elevated over that found in lysates from normal human colon mucosa cells. The elevation of pp60c-src kinase activity in the lysates of the cultured colon tumor cells does not appear to be the result of pp60c-src overexpression suggesting that the specific activity of the pp60c-src phosphotransferase may be enhanced. Cell-free translation of c-src mRNA from colon tumor cells and normal colon mucosa cells yielded pp60c-src molecules with similar levels of in vitro protein kinase activity suggesting that pp60c-src kinase activity in these cells may be regulated differently at a post-translational level. Analysis of pp60c-src molecules from normal colon and colon carcinoma cells revealed that they possessed indistinguishable sites and quantities of phosphorylated serine and tyrosine residues and were not detectably complexed with other cellular proteins. The activation of pp60c-src kinase activity in the colon tumor cells is associated with an apparent increase in the turnover rate of tyrosine-phosphates within the carboxyl terminal portion of the pp60c-src molecules from these tumor derived cell lines.
Systemic Treatment of Adult Atopic Dermatitis: A Review (2016)

Atopic dermatitis (AD) is a common chronic inflammatory skin disease that predominantly affects children. However, it can persist in adulthood and/or start at older ages. Due to its chronic nature and frequently occurring relapses, AD has a substantial effect on patients' quality of life, often requiring long-term systemic treatment, especially in adult patients, who are more frequently refractory to adequate topical treatment with mid- to high-potent corticosteroids and/or calcineurin inhibitors. Therefore, treatment with systemic therapies is often needed to take control of the disease, prevent exacerbations and improve quality of life. However, data regarding systemic treatment effectiveness and long-term safety in adult patients with AD are insufficient. Indeed, standardized international guidelines are lacking, and the treatment approach widely differs among diverse countries. This review focuses on the use of systemic treatments in adult AD patients analyzing published literature.
IL-21 blockade reduces graft-versus-host disease mortality by supporting inducible T regulatory cell generation (2009)

Interleukin-21 (IL-21) enhances T helper 1 (Th1) and Th17 differentiation while inhibiting the conversion of inducible regulatory T cells (Tregs) from naive T cells. To determine the role of IL-21 in graft-versus-host disease (GVHD), anti-IL-21 antibody (Ab) was given to recipients of CD25(-)CD4(+) or CD4(+) and CD8(+) T-effectors. IL-21 neutralization attenuated GVHD-related weight loss and prolonged survival. Likewise, a majority of mice receiving IL-21(-/-) CD25(-) T-effectors survived long term, whereas those receiving wild-type T cells died. The latter recipients had higher grades of GVHD in the ileum and colon. Surprisingly, disruption of IL-21 signaling did not affect IL-17 production, although colon-infiltrating T-effector cells had decreased interferon gamma (IFNgamma) and increased IL-4 production. FoxP3(+) Tregs were increased in colons of anti-IL-21 Ab-treated recipients of FoxP3(-) IL-21(-/-) T cells, indicating Treg conversion. Recipients of FoxP3-deficient T-effectors isolated from chimeras were resistant to the GVHD protective effects of IL-21 blockade. Whereas graft-versus-leukemia (GVL) can occur in the absence of IL-21, loss of both IL-21 and perforin expression abrogated GVL. Together, these data indicate that IL-21 suppresses inducible Treg conversion and further suggest that IL-21 blockade is an attractive strategy to reduce GVHD-induced injury.
Three dimensional polymer MEMS with functionalized carbon nanotubes and modified organic electronics (2004)

Polymer based MEMS is rapidly gaining momentum due to their potential for conformability and other special characteristics not available with silicon microsystems. The polymer based nano- and micro-devices are flexible, chemically and biologically compatible, available in many varieties, and can be fabricated in truly 3-D shapes. The conceived devices thus are cheap and disposable. However, in order to conceive fully functional microsystems, necessary electronics have to be integrated. A modified organic thin film TFT is used for such integration. Although the existing technology of organic TFTs can not rival the well-established silicon semiconductor technology, especially in terms of speed, they are still useful in displays, disposable devices, and sensors. Although organic TFT and polymeric MEMS have several common features that make them compatible with each other, to the best of our knowledge, no serious attempt has been made thus far for combining these technologies. This paper is aimed at bridging this gap. Examples of potential microsensors and systems, such as accelerometers and gyroscopes derived from polymer with functionalised carbon nanotubes are presented. A sensor-in-shoe demonstration will be performed at the Conference. Many issues and challenges in the design and development of polymer-based sensors with organic electronics are also addressed.
Lentiviral vectors for treating and modeling human CNS disorders (2004)

Vectors based on lentiviruses efficiently deliver genes into many different types of primary neurons from a broad range of species including man and the resulting gene expression is long term. These vectors are opening up new approaches for the treatment of neurological diseases such as Parkinson's disease (PD), Huntington's disease (HD), and motor neuron diseases (MNDs). Numerous animal studies have now been undertaken with these vectors and correction of disease models has been obtained. Lentiviral vectors also provide a new strategy for in vivo modeling of human diseases; for example, the lentiviral-mediated overexpression of mutated human alpha-synuclein or huntingtin genes in basal ganglia induces neuronal pathology in animals resembling PD and HD in man. These vectors have been refined to a very high level and can be produced safely for the clinic. This review will describe the general features of lentiviral vectors with particular emphasis on vectors derived from the non-primate lentivirus, equine infectious anemia virus (EIAV). It will then describe some key examples of genetic correction and generation of genetic animal models of neurological diseases. The prospects for clinical application of lentiviral vectors for the treatment of PD and MNDs will also be outlined.
Distinct Responses of Interleukin-6 and Other Laboratory Parameters to Treatment in a Patient with Wegener's Granulomatosis. (1993)

We describe a patient with Wegener's granulomatosis in whom the serum levels of interleukin-6 (IL-6) and other laboratory parameters were monitored. The IL-6 and CRP levels, which were extremely high before treatment, declined rapidly with corticosteroid and cyclophosphamide. IgG, leukocyte count and platelet count declined more gradually. Thus, determination of the serum IL-6 level might be useful in diagnosing and monitoring Wegener's granulomatosis.
P190BCR-ABL chronic myeloid leukaemia: the missing link with chronic myelomonocytic leukaemia? (1994)

Two-thirds of patients with Philadelphia (Ph) chromosome-positive acute lymphoblastic leukaemia (ALL) have a breakpoint in the minor breakpoint cluster region (m-bcr) of the BCR gene, which results in an e1a2 transcript and a P190BCR-ABL fusion protein. This type of genomic rearrangement occurs very rarely in chronic myeloid leukaemia (CML); it has been reported in only four cases. We describe here a fifth case of P190 CML in which the cytomorphological characteristics were intermediate between CML and chronic myelomonocytic leukaemia (CMML). This case, and the four reported previously, had a consistent and significant monocytosis with a low neutrophil/monocyte ratio in the peripheral blood, resembling CMML. On the other hand, they also had a high percentage of circulating immature granulocytes, basophilia and low neutrophil alkaline phosphatase (NAP) score, which are more commonly found in classical CML. Thus, P190 CML may be a specific form of CML, in which the myeloproliferative process includes the monocytic, as well as the granulocytic lineage. Since the molecular defect in CML is thought to involve a pluripotent stem cell, the different effects of P210BCR-ABL and P190BCR-ABL in CML must reflect the somewhat wider spectrum of activity of the P190BCR-ABL. Other patients with atypical CML or CMML who lack a Ph chromosome may also have an m-bcr breakpoint which would not be detected on standard Southern blots, but which would be detectable by polymerase chain reaction amplification of reverse transcribed RNA.
Electrophoretic, solubility and functional properties of commercial soy protein isolates (1991)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTElectrophoretic, solubility and functional properties of commercial soy protein isolatesEstela L. Arrese, Delia A. Sorgentini, Jorge R. Wagner, and Maria C. AnonCite this: J. Agric. Food Chem. 1991, 39, 6, 1029–1032Publication Date (Print):June 1, 1991Publication History Published online1 May 2002Published inissue 1 June 1991https://pubs.acs.org/doi/10.1021/jf00006a004https://doi.org/10.1021/jf00006a004research-articleACS PublicationsRequest reuse permissionsArticle Views2093Altmetric-Citations113LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts
Abstract 108: Relative Contributions of Arterial Stiffness and Hypertension to CVD Risk: The Framingham Heart Study (2016)

Introduction: The presence and implications of abnormal arterial stiffness, a potential independent predictor of outcomes, in community-dwelling treated hypertensives is unknown. Furthermore, limited data exist regarding the risk of cardiovascular disease (CVD) associated with arterial stiffness across the entire range of blood pressure. Methods: We measured carotid-femoral pulse wave velocity (PWV) and classical CVD risk factors in participants of The Framingham Offspring Cohort. The participants were divided into 4 groups according to hypertension (yes/no), and PWV status (high/low based on age- and sex-specific median values) and followed up for CVD events (CVD death, myocardial infarction, unstable angina, heart failure, and stroke). Results: We studied 2127 community-dwelling individuals (60 years, 57% women). 60% (233 of 390) of controlled and 90% (232 of 258) of uncontrolled treated hypertensives had high PWV. The multivariable-adjusted risk for CVD events ( n =248, median follow-up 12.6 years; Figure) rose from normotension with low PWV (reference) to normotension with high PWV (hazard ratio [HR] 1.33, 95% confidence interval [95% CI] 0.86-2.05) and from hypertension with low PWV (HR 1.53, 95% CI 1.00-2.34) to hypertension with high PWV (HR 2.31, 95% CI 1.58-3.36). Conclusions: A substantial proportion of treated hypertensives have high arterial stiffness, a finding that may explain some of the notable residual CVD risk associated in this group. High PWV is associated with a trend towards increasing CVD risk in both non-hypertensives and hypertensives supporting the use of arterial stiffness measurements in both populations.
A Primer on Learning in Bayesian Networks for Computational Biology (2007)

DOAJ is a unique and extensive index of diverse open access journals from around the world, driven by a growing community, committed to ensuring quality content is freely available online for everyone.
Interferon-γ impacts at multiple points during the progression of autoimmune diabetes (1997)

The role of interferon-gamma in autoimmune diabetes was assessed by breeding a null mutation of the interferon-gamma receptor alpha chain into the nonobese diabetic mouse strain, as well as into a simplified T cell receptor transgenic model of diabetes. In contrast to a previous report on abrogation of the interferon-gamma gene, mutation of the gene encoding its receptor led to drastic effects on disease in both mouse lines. Nonobese diabetic mice showed a marked inhibition of insulitis-both the kinetics and penetrance-and no signs of diabetes; the transgenic model exhibited near-normal insulitis, but this never evolved into diabetes, either spontaneously or after experimental provocation. This failure could not be explained by perturbations in the ratio of T helper cell phenotypes; rather, it reflected a defect in antigen-presenting cells or in the islet beta cell targets.
Nonparametric Bayes dynamic modelling of relational data (2014)

Symmetric binary matrices representing relations are collected in many areas. Our focus is on dynamically evolving binary relational matrices, with interest being on inference on the relationship structure and prediction. We propose a nonparametric Bayesian dynamic model, which reduces dimensionality in characterizing the binary matrix through a lower-dimensional latent space representation, with the latent coordinates evolving in continuous time via Gaussian processes. By using a logistic mapping function from the link probability matrix space to the latent relational space, we obtain a flexible and computationally tractable formulation. Employing Pólya-gamma data augmentation, an efficient Gibbs sampler is developed for posterior computation, with the dimension of the latent space automatically inferred. We provide theoretical results on flexibility of the model, and illustrate its performance via simulation experiments. We also consider an application to co-movements in world financial markets.
The Measurement, Instrumentation and Sensors Handbook (1998)

This product is a concise and useful reference for industrial engineers, scientists, designers, managers, research personnel and students. It covers an extensive range of topics that encompass the subject of measurement, instrumentation, and sensors.The Measurement Instrumentation and Sensors Handbook on CD-ROM provides easy access to the instrumentation and techniques for practical measurements required in engineering, physics, chemistry, and the life sciences.
Activation of NF-kappaB pathway in Duchenne muscular dystrophy: relation to age. (2011)

Muscle degeneration in Duchenne muscular dystrophy (DMD) is exacerbated by increased oxidative stress and the endogenous inflammatory response, with a key role played by nuclear factor kappa-B (NF-kappaB) and other related factors such as tumor necrosis factor (TNF)-alpha and interleukin (IL)-6. However the time course of expression of these molecules and the relation with the amount of necrosis and regeneration have never been investigated. The expression of NF-kappaB, the cytokines TNF-alpha and IL-6 and the antioxidant enzyme glutathione peroxidase (GPx) was studied in muscle samples from 14 patients with DMD aged between 2 and 9 years. Moreover a quantitative morphological evaluation was performed to evaluate necrotic and regenerative areas. The highest percentage of necrosis was revealed within 4 years of age, with a significant negative correlation with age (p < 0.003), which paralleled to a significant decrement of regenerating area (p < 0.0004). We reported the novel observation that the number of NF-kappaB positive fibers and the NF-kappaB DNA-binding activity, revealed by EMSA, are high at two years of life and significantly decline with age (p < 0.0005 and p < 0.0001). The expression of TNF-alpha, IL-6 and GPx was upregulated in DMD muscles compared to controls and significantly increased with age on real-time PCR analysis (p < 0.0002; p < 0.0005; p < 0.03 respectively) and ELISA (p < 0.002; p < 0.02; p < 0.0001 respectively). Since anti-inflammatory and anti-oxidant drugs are nowadays being translated to clinical studies in DMD, the reported insights on these therapeutic targets appear relevant. Further studies on the interactions among these pathways in different DMD phases and on the response of these cascades to treatments currently under investigation are needed to better elucidate their relevance as therapeutic targets.
Design alternatives for scalable Web server accelerators (2002)

We study design alternatives for, and describe implementations and performance of, a scalable and highly available Web server accelerator. The accelerator runs under an embedded operating system and improves Web server performance by caching data. The basic design alternatives include a content router or a TCP router (without content routing) in front of a set of Web cache accelerator nodes, with the cache memory distributed across the accelerator nodes. Content based routing reduces cache node CPU cycles but can make the front-end router a bottleneck. With the TCP router, a request for a cached object may initially be sent to the wrong cache node; this results in larger cache node CPU cycles, but can provide a higher aggregate throughput, because the TCP router becomes a bottleneck at a higher throughput than the content router. Based on measurement of implementations, we quantify the throughput ranges in which different designs are preferable. We also examine a combination of content based and TCP routing techniques. We examine optimizations, such as different communication and data delivery methods, replication of hot objects, and cache replacement policies that take into account the fact that there might be different bottlenecks in the system at different times; depending upon which resource is likely to become a bottleneck, a different cache replacement algorithm is applied.
Angiogenic properties of dehydrated human amnion/chorion allografts: therapeutic potential for soft tissue repair and regeneration (2014)

TAKEN TOGETHER, THESE RESULTS DEMONSTRATE THAT DHACM GRAFTS: 1) contain angiogenic growth factors retaining biological activity; 2) promote amplification of angiogenic cues by inducing endothelial cell proliferation and migration and by upregulating production of endogenous angiogenic growth factors by endothelial cells; and 3) support the formation of blood vessels in vivo. dHACM grafts are a promising wound care therapy with the potential to promote revascularization and tissue healing within poorly vascularized, non-healing wounds.
Chemical Functionalization of Graphene To Augment Stem Cell Osteogenesis and Inhibit Biofilm Formation on Polymer Composites for Orthopedic Applications (2015)

Toward designing the next generation of resorbable biomaterials for orthopedic applications, we studied poly(ε-caprolactone) (PCL) composites containing graphene. The role, if any, of the functionalization of graphene on mechanical properties, stem cell response, and biofilm formation was systematically evaluated. PCL composites of graphene oxide (GO), reduced GO (RGO), and amine-functionalized GO (AGO) were prepared at different filler contents (1%, 3%, and 5%). Although the addition of the nanoparticles to PCL markedly increased the storage modulus, this increase was largest for GO followed by AGO and RGO. In vitro cell studies revealed that the AGO and GO particles significantly increased human mesenchymal stem cell proliferation. AGO was most effective in augmenting stem cell osteogenesis leading to mineralization. Bacterial studies revealed that interaction with functionalized GO induced bacterial cell death because of membrane damage, which was further accentuated by amine groups in AGO. As a result, AGO composites were best at inhibiting biofilm formation. The synergistic effect of oxygen containing functional groups and amine groups on AGO imparts the optimal combination of improved modulus, favorable stem cell response, and biofilm inhibition in AGO-reinforced composites desired for orthopedic applications. This work elucidates the importance of chemical functionalization of graphene in polymer composites for biomedical applications.
Supervised textured image segmentation using feature smoothing and probabilistic relaxation techniques (1989)

A description is given of a supervised textured image segmentation algorithm that provides improved segmentation results. An improved method for extracting textured energy features in the feature extraction stage is described. It is based on an adaptive noise smoothing concept that takes the nonstationary nature of the problem into account. Texture energy features are first estimated using a window of small size to reduce the possibility of mixing statistics along region borders. The estimated texture energy feature values are smoothed by a quadrant filtering method to reduce the variability of the estimates while retaining the region border accuracy. The estimated feature values of each pixel are used by a Bayes classifier to make an initial probabilistic labeling. The spatial constraints are enforced through the use of a probabilistic relaxation algorithm. Two probabilistic relaxation algorithms are investigated. Limiting the probability labels by probability threshold is proposed. The tradeoff between efficiency and degradation of performed is studied.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">&gt;</ETX>
A Comparison of Efficiency of Multicandidate Electoral Systems (1984)

A variety of electoral systems for single-winner, multicandidate elections are evaluated according to their tendency to (a) select the Condorcet candidate-the candidate who could beat each of the others in a two-way race-if one exists, and (b) select a candidate with high social (average) utility. The proportion of Condorcet candidates selected and a measure of social-utility efficiency under either random society or spatial model assumptions are estimated for seven electoral systems using Monte Carlo techniques. For the spatial model simulations, the candidates and voters are generated from multivariate normal distributions. Numbers of candidates and voters are varied, along with the number of spatial dimensions, the correlation structure, and the relative dispersion of candidates to voters. The Borda, Black, and Coombs methods perform well on both criteria, in sharp contrast to the performance of the plurality method. Approval voting, plurality with runoff, and the Hare system (preferential voting) provide mixed, but generally intermediate results. Finally, the results of the spatial model simulations suggest a multicandidate equilibrium for winningoriented candidates (under plurality, runoff, and Hare) that is not convergent to the median.