gebhart/patrepeval huggingface dataset:
Culture techniques for studies on the growth, development and reproduction of copepods and cladocerans under laboratory and in situ conditions: a review (1989)

SUMMARY. This review deals with culture techniques in use to estimate individual growth, development and reproduction of copepods and cladocerans in cultures. The conceptual aspects of growth, reproduction and feeding behaviour are briefly summarized. Marine copepods are included, because the techniques employed for the cultivation of these animals are often more advanced than those used for freshwater crustaceans. Most of the studies reviewed here were carried out under defined laboratory conditions, but a few were under field conditions, generally in small in situ enclosures. The culture methods described in this review are based on 272 studies published between 1910 and 1987. A large number of different culture systems are critically discussed in relation to culture conditions and culture techniques and the taxa used. Particular attention is given to the effect of food quality, and the problem of how to apply laboratory measurements to field populations so as to limit errors to the minimum. A more detailed summary is given in the section on ‘Recommendations’ at the end of the review.
Bacterial entry into epithelial cells: the paradigm of Shigella (1996)

Shigella flexneri is a model for the entry of bacterial pathogens into nonphagocytic epithelial cells. On contact with the epithelial cell surface, the Ipa proteins are secreted from the bacterium. The Ipa complex then triggers a reorganization of the host-cell cytoskeleton leading to the formation of membrane ruffles, which engulf the bacterium.
Radiotherapy Alone Versus Combined Chemotherapy and Radiotherapy in Nonresectable Non-Small-Cell Lung Cancer: First Analysis of a Randomized Trial in 353 Patients (1991)

We report the results observed in a large, randomized study that compared the effects of radiotherapy alone (the standard therapy) with those of a combination of radiotherapy and chemotherapy in nonresectable squamous cell and large-cell lung carcinoma. The radiation dose was 65 Gy in each group, and chemotherapy included vindesine, cyclophosphamide, cisplatin, and lomustine. In this study, 177 patients received radiotherapy alone (group A), and 176 patients received the combined treatment (group B). The 2-year survival rate was 14% in group A and 21% in group B (P = .08). The distant metastasis rate was significantly lower in group B (P less than .001). Local control was poor in both groups (17% and 15%, respectively) and remained the major problem.
The measurement and therapeutic implications of circulating tumour cells in breast cancer (2005)

Circulating tumours cells (CTCs) represent an important biologic link in the spread of breast cancer from primary to metastatic disease. CTCs are strong predictors of prognosis in patients with metastatic breast cancer. Research to date has focused on development of methods with adequate sensitivity and specificity to reproducibly identify these rare events. Future research will focus on the biologic phenotypes of these cells with goals to understand mechanisms of metastasis, to identify novel therapeutic targets, and to monitor response to therapy.
New brain atlas—Mapping the human brain in vivo with 7.0 T MRI and comparison with postmortem histology: Will these images change modern medicine? (2008)

Abstract Human brain imaging with magnetic resonance at 7.0 Tesla (T) can reveal the brain's architecture with resolution equivalent to that obtained from thin slices in vitro. In vivo images can provide tissue type identification with a greater clarity than that available in vitro without special stains. The coil design is an 8 or 12 channel phased array antenna tuned for 7.0T. The individual coils are arranged 8 or 12 loops in a “crown” configuration. Image acquisition is 6 minutes for 15 slices of 2 mm thickness with in‐plane resolution of 0.25 mm using a gradient echo pulse sequence. While others have achieved good resolution in human brain imaging, this paper demonstrates a pulse sequence with a specialized radiofrequency coil that achieves an uniformity and resolution not shown in previous studies at 7.0T. Our new images demonstrate very fine details of the midbrain, brainstem, and hippocampal area that have not been previously achieved in living human subjects. © 2008 Wiley Periodicals, Inc. Int J Imaging Syst Technol, 18, 2–8, 2008
Segment Routing Fast Reroute (2013)

This document presents a Fast Reroute approach aimed at providing link
protection of nodal and adjacency segments to the Segment Routing
framework. This FRR behavior builds on proven IP-FRR concepts being
LFAs, remote LFAs (RLFA), and remote LFAs with directed forwarding
(DLFA). We describe their implementation using SR segments. We then
analyze the benefits brought by Segment Routing to the scalability of
such IP-FRR approaches.
Survivin As a Therapeutic Target for Radiation Sensitization in Lung Cancer (2004)

Expression of survivin is elevated in most malignancies, especially in radiation-resistant cell lines. In this study, we investigated how radiation affects survivin expression in primary endothelial cells as well as in malignant cell lines. We found that 3 Gy significantly reduced survivin protein level in human umbilical vein endothelial cells (HUVECs) but not in tumor cell lines. Flow cytometry studies suggest that the down-regulation of survivin is independent of cell cycle. In addition, survivin mRNA level was also down-regulatable by irradiation. However, it was abrogated by actinomycin D-mediated inhibition of gene transcription. Luciferase reporter gene assays suggest that irradiation suppressed the survivin promoter. p53 overexpression reduced survivin expression, but overexpression of a p53 mutant failed to abolish the radiation-induced down-regulation in HUVECs. Alteration of p53 status in Val138 lung cancer cell line also failed to restore the radiation-inducible down-regulation. Overexpression of survivin in 293 cells prevented apoptosis induced by irradiation and increased cell viability after irradiation. The inhibition of survivin using antisense oligonucleotides caused a significant decrease in cell viability of irradiated H460 lung cancer cells. These data suggest that radiation transcriptionally down-regulates survivin in HUVECs. This regulatory mechanism is defective in malignancies and is not mediated by p53. Survivin overexpression may lead to resistance to radiotherapy by inhibiting apoptosis and enhancing cell viability. The inhibition of survivin results in sensitization of H460 lung cancer cells to radiation. These studies suggest that survivin may be a target for cancer therapy.
Orlistat Is a Novel Inhibitor of Fatty Acid Synthase with Antitumor Activity (2004)

One of the fundamental principles of pharmacology is that most drugs have side effects. Although considerable attention is paid to detrimental side effects, drugs can also have beneficial side effects. Given the time and expense of drug development, it would be particularly exciting if a systematic method could be applied to reveal all of the activities, including the unappreciated actions, of a potential drug. The present study takes the first step along this path. An activity-based proteomics strategy was used to simultaneously identify targets and screen for their inhibitors in prostate cancer. Orlistat, a Food and Drug Administration-approved drug used for treating obesity, was included in this screen. Surprisingly, we find a new molecular target and a potential new application for Orlistat. Orlistat is a novel inhibitor of the thioesterase domain of fatty acid synthase, an enzyme strongly linked to tumor progression. By virtue of its ability to inhibit fatty acid synthase, Orlistat halts tumor cell proliferation, induces tumor cell apoptosis, and inhibits the growth of PC-3 tumors in nude mice.
High-Resolution Greenland Ice Core Data Show Abrupt Climate Change Happens in Few Years (2008)

The last two abrupt warmings at the onset of our present warm interglacial period, interrupted by the Younger Dryas cooling event, were investigated at high temporal resolution from the North Greenland Ice Core Project ice core. The deuterium excess, a proxy of Greenland precipitation moisture source, switched mode within 1 to 3 years over these transitions and initiated a more gradual change (over 50 years) of the Greenland air temperature, as recorded by stable water isotopes. The onsets of both abrupt Greenland warmings were slightly preceded by decreasing Greenland dust deposition, reflecting the wetting of Asian deserts. A northern shift of the Intertropical Convergence Zone could be the trigger of these abrupt shifts of Northern Hemisphere atmospheric circulation, resulting in changes of 2 to 4 kelvin in Greenland moisture source temperature from one year to the next.
Artificial chromosome formation in maize (Zea mays L.) (2008)

We report on the construction of maize minichromosomes using shuttle vectors harboring native centromeric segments, origins of replication, selectable marker genes, and telomeric repeats. These vectors were introduced into scutellar cells of maize immature embryos by microprojectile bombardment. Several independent transformation events were identified containing minichromosomes in addition to the normal diploid complement of 20 maize chromosomes. Immunostaining indicated that the minichromosomes recruited centromeric protein C, which is a specific component of the centromere/kinetochore complex. Minichromosomes were estimated to be 15-30 Mb in size based on cytological measurements. Fluorescent in situ hybridization (FISH) showed that minichromosomes contain the centromeric, telomeric, and exogenous unique marker sequences interspersed with maize retrotransposons. Minichromosomes were detected for at least a year in actively dividing callus cultures, providing evidence for their stability through numerous cell cycles. Plants were regenerated and minichromosomes were detected in root tips, providing confirmation of their normal replication and transmission during mitosis and through organogenesis. Assembly of maize artificial chromosomes may provide a tool to study centromere function and a foundation for developing new high capacity vectors for plant functional genomics and breeding.
Microsoft Exchange Server 2003 Unleashed (2003)

The most extensive Exchange 2003 reference found on the market today from one of the world's leading Microsoft server experts, Rand Morimoto. Written from the ground up exclusively for Exchange 2003--not a revision of an Exchange 2000 book. Based on the author's experience implementing Exchange 2003 in heavy-use corporate environments since Beta release 1. Contains hard-to-find intermediate to advanced coverage far beyond the competition's typical installation and set-up how-to's including planning, migration, security, disaster recovery, and vast troubleshooting tips. A complete reference targeted at intermediate to advanced users for help in managing the complicated and business-critical matters of e-mail, message databases, and ever-increasing mobile and remote system access.
Monoclonal antibody C242-Pseudomonas exotoxin A. A specific and potent immunotoxin with antitumor activity on a human colon cancer xenograft in nude mice. (1992)

Two immunotoxins were constructed by chemically coupling the monoclonal antibody C242 to Pseudomonas exotoxin A (PE) or a modified form, NlysPE40, that lacks the cell binding domain of PE. Monoclonal antibody C242 recognizes a specific sialylated carbohydrate epitope on a high molecular weight membrane glycoprotein present on cells of human colon, pancreatic, and cervical cancers. C242-PE and C242-NlysPE40 were very cytotoxic for cells expressing this antigen with 50% inhibition of protein synthesis occurring on Colo205 cells at 0.2 ng/ml (0.9 pM) for C242-PE and 6.0 ng/ml (31 pM) for C242-NlysPE40. The two immunotoxins also exhibited a strong antitumor effect on a human colon cancer xenograft grown in nude mice. The specificity and potency of these two C242 immunotoxins warrant their further development for the treatment of cancer.
Server and buffer allocation in a client-server multimedia system (2002)

This paper presents a deterministic model for analyzing the performance of some client-server scheduling schemes for supporting multiple connections between a single server and multiple clients. It is concerned with the optimal allocation of the server and the client buffers. Each client presents data at a fixed rate (e.g., uncompressed video, CD audio), and the server must provide data to meet that rate. Any excess data (that arrived early) is buffered, provided enough client buffer has been allocated. The server may send to only one client at a time, and must schedule when and to which client to send, based on the rates requested and information fed back from the clients. Each client may make a specific request for data, or send information describing the client buffer state to the server. The authors examine analytically the performance of two schemes on the basis of server utilization and client buffer requirements, and validate the results using simulation.
Potential use of nitroxides in radiation oncology. (1994)

The identification of radioprotectors is an important goal for those involved in radiation oncology and for those interested in the investigation of the mechanisms of radiation cytotoxicity. Recently, a new class of in vitro and in vivo radioprotectors, the nitroxides, has been discovered. The nitroxides are low-molecular-weight stable free radicals which are freely membrane permeable and which have been shown to act as superoxide dismutase mimics. Further investigation of these compounds has shown that a water-soluble nitroxide, Tempol, protects cultured Chinese hamster V79 cells from the cytotoxicity caused by superoxide, hydrogen peroxide, and t-butyl hydroperoxide. Tempol and five other water-soluble nitroxides have also been shown to protect V79 cells against radiation-induced cytotoxicity. Potential mechanisms of protection by the nitroxides include oxidation of reduced transition metals, superoxide dismutase-like activity, and scavenging of oxy- and carbon-based free radicals. In vivo studies reveal that Tempol protects C3H mice from the lethal effects of radiation with a dose causing 50% lethality within 30 days of 9.97 Gy and 7.84 Gy in Tempol-treated and saline-treated mice, respectively, and a dose modification factor of 1.3. The nitroxides represent a new class of non-thiol radioprotectors which may also have application as general antioxidants. Additional work is necessary to screen other nitroxides for in vivo radioprotection and toxicity as well as to fully evaluate the extent to which these compounds protect tumors.
RIG-I suppresses the migration and invasion of hepatocellular carcinoma cells by regulating MMP9 (2015)

The retinoic acid-induced protein I (Rig-I/Ddx58), (RIG-I) initiates a signaling cascade that induces innate immune defences which is associated with the production of type I interferons (IFNs) and inflammatory cytokines to establish an antiviral state. Aberrant RIG-I signaling leads to inflammation, autoimmune diseases and cancer. However, the role of RIG-I in hepatocellular carcinoma (HCC) is still unknown. Here, we observed that RIG-I expression was downregulated in HCC tissues and loss of RIG-I expression was correlated with poor clinicopathological features. Additionally, we demonstrated that patients with positive RIG-I expression had a better 3-year survival and RIG-I was an independent factor for predicting the prognosis of HCC patients. Elevated RIG-I expression inhibited the proliferation, migration, and invasion of HCC. Inhibiting RIG-I with its specific siRNA was able to attenuate the malignant behavior of HCC cells. Moreover, RIG-I inhibited the invasive behavior through downregulating matrix metalloproteinase-9 (MMP9). Mechanistically, RIG-I enhances IFN-α response by amplifying IFN-α effecter signaling via strengthening STAT1 activation. Addressing this pathway, we identified that RIG-I may serve as a prognostic marker and that MMP9 may be a potential target of RIG-I in HCC.
Autoantibodies against CD38 (ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase) that impair glucose-induced insulin secretion in noninsulin- dependent diabetes patients. (1998)

Cyclic ADP-ribose (cADPR) has been shown to be a mediator for intracellular Ca2+ mobilization for insulin secretion by glucose in pancreatic beta cells, and CD38 shows both ADP-ribosyl cyclase to synthesize cADPR from NAD+ and cADPR hydrolase to hydrolyze cADPR to ADP-ribose. We show here that 13.8% of Japanese non-insulin-dependent diabetes (NIDDM) patients examined have autoantibodies against CD38 and that the sera containing anti-CD38 autoantibodies inhibit the ADP-ribosyl cyclase activity of CD38 (P </= 0.05). Insulin secretion from pancreatic islets by glucose is significantly inhibited by the addition of the NIDDM sera with anti-CD38 antibodies (P </= 0.04-0.0001), and the inhibition of insulin secretion is abolished by the addition of recombinant CD38 (P </= 0.02). The increase of cADPR levels in pancreatic islets by glucose was also inhibited by the addition of the sera (P </= 0.05). These results strongly suggest that the presence of anti-CD38 autoantibodies in NIDDM patients can be one of the major causes of impaired glucose-induced insulin secretion in NIDDM.
Prevention of clinical coliform mastitis in dairy cows by a mutant Escherichia coli vaccine. (1989)

A prospective cohort study was undertaken in two commercial California dairies. The treatment group, 246 cows, received three doses of a whole cell bacterin of J5 Escherichia coli (mutant of E. coli O111:B4) plus Freund's incomplete adjuvant vaccine (two in the dry period and one after calving) while 240 unvaccinated cows served as controls. Thirty-five cases of clinical coliform mastitis were diagnosed, six in vaccinated cows and 29 in unvaccinated cows. Bacteria isolated from the clinical cases included 15 E. coli five Klebsiella pneumoniae, three K. oxytoca, three K. ozaenae, five Enterobacter aerogenes, three Serratia marcescens and one Serratia spp. Four control cows were culled, three of them because of chronic coliform mastitis and one because of postcoliform infection agalactia. Incidence rate of clinical gram-negative mastitis was 2.57% in vaccinated cows and 12.77% in unvaccinated cows. The estimated risk ratio, the measure of risk of having clinical gram-negative mastitis for vaccinated cows to unvaccinated cows, was 0.20 (p less than 0.005), indicating a strong relationship between vaccination and lack of clinical gram-negative mastitis. The results of this trial indicate that the administration of the E. coli J5 vaccine is protective against natural challenge to gram-negative bacteria, and reduces the incidence of clinical gram-negative mastitis in dairy cows during the first three months of lactation.
Reduction of the fcc to L10 Ordering Temperature for Self-Assembled FePt Nanoparticles Containing Ag (2002)

[Fe49Pt51]88Ag12 nanoparticles were prepared by the simultaneous polyol reduction of platiunum acetylacetonate and silver acetate and the thermal decomposition of iron pentacarbonyl, giving 3.5 nm diameter FePt particles with Ag atoms substituted in the lattice. The addition of Ag promoted the fcc to tetragonal phase transition, thereby reducing the temperature required for this transition by some 100 to 150 °C compared with pure FePt nanoparticles. After heat treatment at 400 °C for 30 min, the coercivity of the films containing [Fe49Pt51]88Ag12 nanoparticles was more than 3400 Oe, while the films containing FePt nanoparticles were superparamagnetic. This decrease in phase transformation temperature allowed us to decrease the particle coalescence and loss in particle positional order seen when FePt nanoparticles were transformed at temperatures above 550 °C.
Bonding mechanisms at the interface of ceramic prosthetic materials (1971)

Abstract The development of a bone‐bonding calcia‐phosposilicate glass‐ceramic is discussed. A theoretical model to explain the interfacial bonding is based upon in‐vitro studies of glass‐ceramic solubility in interfacial hydroxyapatite crystallization mechanisms, compared with in‐vivo rat femur implant histology and ultrastructure results.
N-ReN recovers CO/sub 2/ from flue gas economically (1984)

Early in 1982, N-ReN Southwest was in the final stages of mechanical completion on a carbon dioxide (CO/sub 2/) recovery plant. The plant was designed to recover a maximum of 104 tons/day of CO/sub 2/, using 18-20% monoethanolamine. The CO/sub 2/ source is a combination of boiler flue gas and primary reformer exhaust gas from two ammonia plants. The primary concern of this project was the composition of the gas, which contains an average of about 4% oxygen. While N-ReN was completing its CO/sub 2/ unit in Carlsbad, N.M., Dow Chemical Co. was completing its flue gas CO/sub 2/ recovery pilot plant project in Lubbock, Tex. This technology (GAS/SPEC FT-1) uses a specially formulated alkanolamine solvent to remove CO/sub 2/ from low pressure streams containing low levels of CO/sub 2/ and oxygen. Although N-ReN and Dow had been in communication, design and construction of the Carlsbad plant was completed before Dow successfully concluded evaluation of the FT-1 technology. However, the prospect of retrofitting the N-ReN plant was found to be feasible.
Localized infusion of IGF-I results in skeletal muscle hypertrophy in rats (1998)

Insulin-like growth factor I (IGF-I) peptide levels have been shown to increase in overloaded skeletal muscles (G. R. Adams and F. Haddad. J. Appl. Physiol. 81: 2509-2516, 1996). In that study, the increase in IGF-I was found to precede measurable increases in muscle protein and was correlated with an increase in muscle DNA content. The present study was undertaken to test the hypothesis that direct IGF-I infusion would result in an increase in muscle DNA as well as in various measurements of muscle size. Either 0.9% saline or nonsystemic doses of IGF-I were infused directly into a non-weight-bearing muscle of rats, the tibialis anterior (TA), via a fenestrated catheter attached to a subcutaneous miniosmotic pump. Saline infusion had no effect on the mass, protein content, or DNA content of TA muscles. Local IGF-I infusion had no effect on body or heart weight. The absolute weight of the infused TA muscles was approximately 9% greater (P < 0.05) than that of the contralateral TA muscles. IGF-I infusion resulted in significant increases in the total protein and DNA content of TA muscles (P < 0.05). As a result of these coordinated changes, the DNA-to-protein ratio of the hypertrophied TA was similar to that of the contralateral muscles. These results suggest that IGF-I may be acting to directly stimulate processes such as protein synthesis and satellite cell proliferation, which result in skeletal muscle hypertrophy.