gebhart/patrepeval huggingface dataset:
Comparison of in vivo effects of human recombinant IL 1 and human recombinant IL 6 in mice. (1988)

IL 1 and IL 6 share a number of biological activities, including induction of fever, neutrophilia and acute phase response, and IL 1 induces IL 6 production by fibroblasts and macrophages. Therefore, it was proposed that IL 6 mediates many of the activities of IL 1. To test this hypothesis in vivo, we assessed induction of IL 6 following IL 1 alpha administration to mice and tested IL 6 for radioprotection and induction of early (CSF) and late (fibrinogen and SAA) acute phase reactants. IL 1 alpha given to mice ip induced, in a dose dependent manner, detectable IL 6 in circulation, with maximal titers at 2-4 hrs. However, unlike IL 1 which is 10-1000 ng/mouse of human recombinant IL 6 did not result in increased survival of mice following lethal irradiation. In fact, such treatment given 20 hrs before LD50/30 doses of radiation resulted in reduced survival of mice. However, IL 6 augmented the radioprotective effect of IL 1. IL 1 in doses above 10 ng/mouse induced within 2 to 6 hrs a dose dependent increase in CSF in circulation, but IL 6 did not induce detectable levels of CSF at 2, 6 and 20 hrs after administration. Administration of IL 6 to mice produced a dose dependent increase in circulating fibrinogen and SAA. Similarly, administration of IL 1 resulted in much greater increases in levels of fibrinogen and SAA. Therefore, IL 1 is a more effective inducer of fibrinogen and SAA in mice than is IL 6. Although definitive conclusions concerning the relative roles for IL 1 and IL 6 in vivo will await availability of anti IL 1 and anti-IL 6 antibodies, our data do not support the suggestion that the above IL 1 effects can be attributed solely to IL 6.
Characterization of the Human Prolyl 4-Hydroxylases That Modify the Hypoxia-inducible Factor (2003)

The hypoxia-inducible factors (HIFs) play a central role in oxygen homeostasis. Hydroxylation of one or two critical prolines by specific hydroxylases (P4Hs) targets their HIF-alpha subunits for proteasomal degradation. By studying the three human HIF-P4Hs, we found that the longest and shortest isoenzymes have major transcripts encoding inactive polypeptides, which suggest novel regulation by alternative splicing. Recombinant HIF-P4Hs expressed in insect cells required peptides of more than 8 residues, distinct differences being found between isoenzymes. All the HIF-P4Hs hydroxylated peptides corresponding to Pro564 in HIF-1alpha, whereas a Pro402 peptide had 20-50-fold Km values for two isoenzymes but was not hydroxylated by the shortest isoenzyme at all; this difference was not explained by the two prolines being in a -Pro402-Ala- and -Pro564-Tyr-sequence. All the HIF-P4Hs-hydroxylated peptides corresponding to two of three potential sites in HIF-2alpha and one in HIF-3alpha. The Km values for O2 were slightly above its atmospheric concentration, indicating that the HIF-P4Hs are effective oxygen sensors. Small molecule inhibitors of collagen P4Hs also inhibited the HIF-P4Hs, but with distinctly different Ki values, indicating that it should be possible to develop specific inhibitors for each class of P4Hs and possibly even for the individual HIF-P4Hs.
B7-H1 Overexpression Regulates Epithelial–Mesenchymal Transition and Accelerates Carcinogenesis in Skin (2010)

B7-H1 (CD274) is a T-cell coinhibitory molecule that is also often induced on human carcinoma cells, where its expression has been implicated in immune escape. Under inflammatory conditions, B7-H1 is also inducible in normal epithelial cells but little is known about its involvement in conversion of normal cells to tumor cells. Here, we show that skin-specific expression of B7-H1 accelerates inflammatory carcinogenesis in a methylcholantrene (MCA)-induced model of squamous cell carcinoma (SCC). Inflammatory responses induced by MCA or phorbol ester TPA were clearly inhibited in B7-H1 transgenic mice (B7-H1tg mice). Antibody-mediated blockade of either B7-H1 or the related molecule PD-1 revealed that their ability to limit inflammation relied on ligand interactions made by B7-H1 or PD-1. Skin keratinocytes derived from B7-H1tg mice exhibited constitutive reduction of E-cadherin, and SCC induced in B7-H1tg mice also showed loss of E-cadherin along with elevated expression of the transcription factors Slug and Twist that drive epithelial-mesenchymal transition (EMT). Our results indicate that upregulation of B7-H1 in skin epithelial cells promotes EMT and accelerates carcinogenesis, revealing insights into the significance of B7-H1 overexpression on solid tumor cells and hinting at a close relationship between EMT and immune escape signaling pathways in cancer.
Organic light‐emitting diodes with multiple photocrosslinkable hole‐transport layers (2003)

Abstract We report on photocrosslinkable hole‐transport polymers and their use as photodefinable hole‐transport layers in organic light‐emitting diodes. The polymers were obtained by copolymerization of bis(diarylamino)biphenyl‐based acrylate monomers with cinnamate‐functionalized acrylate moieties. Polymers with a range of redox potentials were obtained by varying the substitution patterns of the bis(diarylamino)biphenyl units. The 2 + 2 cycloaddition of the cinnamate moieties following UV irradiation renders the material insoluble. This allows for patterning of the polymer and simultaneously enables the fabrication of multilayer structures from solution. Hole mobilities were measured in these copolymers with the time‐of‐flight technique. Their performance as hole‐transport layers in light‐emitting diodes, with tris(8‐hydroxyquinolinato)aluminum as the emitter and electron‐transport layer, is evaluated. Electroluminescent devices with multiple hole‐transport layers having different ionization potentials were fabricated from solution, and the quantum efficiency of these devices was greater than that for devices based on a single hole‐transport layer. © 2003 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 41: 2726–2732, 2003
A Dominant Negative to Activation Protein-1 (AP1) That Abolishes DNA Binding and Inhibits Oncogenesis (1997)

We describe a dominant negative (DN) to activation protein-1 (AP1) that inhibits DNA binding in an equimolar competition. AP1 is a heterodimer of the oncogenes Fos and Jun, members of the bZIP family of transcription factors. The DN, termed A-Fos, consists of a newly designed acidic amphipathic protein sequence appended onto the N-terminus of the Fos leucine zipper, replacing the normal basic region critical for DNA binding. The acidic extension and the Jun basic region form a heterodimeric coiled coil structure that stabilizes the complex over 3000-fold and prevents the basic region of Jun from binding to DNA. Gel shift assays indicate that A-Fos can inactivate the DNA binding of a Fos:Jun heterodimer in an equimolar competition. Transient transfection assays indicate that A-Fos inhibits Jun-dependent transactivation. Both the acidic extension and the Fos leucine zipper are critical for this inhibition. Expression of A-Fos in mouse fibroblasts inhibits focus formation more than colony formation, reflecting the ability of A-Fos to interfere with the AP1 biological functions in mammalian cells. This reagent is more potent than a deletion of either the Fos or Jun transactivation domain, which has been used previously as a dominant negative to AP1 activity.
Phase Behavior of Nanoparticles in a Thermotropic Liquid Crystal (2005)

In this work, we describe the outstanding behavior of a nanocomposite system composed of the thermotropic liquid crystal 5CB doped with nanoparticles of the magnetic iron oxide maghemite (gamma-Fe(2)O(3)). We show that the I-N transition is associated with a reversible gathering of nanoparticles inside droplets of the ferronematic phase coexisting with a nonmagnetic nematic host phase.
Liquid crystals of gold(I) N-heterocyclic carbene complexes (2009)

Three types of Au(I) N-heterocyclic carbene (NHC) and imidazole (Im) complexes, namely [Au(NHC)Cl], [Au(NHC)(Im)][NO(3)], and [Au(NHC)(2)][NO(3)], with two-, three-, and four-N-long alkyl chains, respectively, were synthesized and their mesomorphic properties investigated. Only the [Au(NHC)(Im)][NO(3)] series of compounds, adopting an m-shaped conformation in the solid state, showed liquid crystalline properties. For the molecules with three alkyl chains in particular, the Coulombic and hydrogen bonding interactions between the cationic head core and anionic NO(3)(-), and the hydrophobic chain-chain interactions facilitate in sustaining the partially ordered motion, which is not observed for those with two and four arms. These complexes were employed for preparation of stable nanomaterials in organic solvents.
Supporting storage and retrieval of computer and human activity (1998)

Article Supporting storage and retrieval of computer and human activity Share on Authors: Mark D. Spiteri University of Cambridge, Computer Laboratory University of Cambridge, Computer LaboratoryView Profile , John Bates University of Cambridge, Computer Laboratory University of Cambridge, Computer LaboratoryView Profile Authors Info & Claims EW 8: Proceedings of the 8th ACM SIGOPS European workshop on Support for composing distributed applicationsSeptember 1998 Pages 268–275https://doi.org/10.1145/319195.319236Online:07 September 1998Publication History 0citation176DownloadsMetricsTotal Citations0Total Downloads176Last 12 Months0Last 6 weeks0 Get Citation AlertsNew Citation Alert added!This alert has been successfully added and will be sent to:You will be notified whenever a record that you have chosen has been cited.To manage your alert preferences, click on the button below.Manage my AlertsNew Citation Alert!Please log in to your account Save to BinderSave to BinderCreate a New BinderNameCancelCreateExport CitationPublisher SiteGet Access
Imaging of Copper, Zinc, and Other Elements in Thin Section of Human Brain Samples (Hippocampus) by Laser Ablation Inductively Coupled Plasma Mass Spectrometry (2005)

Laser ablation inductively coupled plasma mass spectrometry (LA-ICPMS) was used to produce images of element distribution in 20-microm thin sections of human brain tissue. The sample surface was scanned (raster area approximately 80 mm(2)) with a focused laser beam (wavelength 213 nm, diameter of laser crater 50 microm, and laser power density 3 x 10(9) W cm(-2)) in a cooled laser ablation chamber developed for these measurements. The laser ablation system was coupled to a double-focusing sector field ICPMS. Ion intensities of 31P+, 32S+, 56Fe+, 63Cu+, 64Zn+, 232Th+, and 238U+ were measured within the area of interest of the human brain tissue (hippocampus) by LA-ICPMS. The quantitative determination of copper, zinc, uranium, and thorium distribution in thin slices of the human hippocampus was performed using matrix-matched laboratory standards. In addition, a new arrangement in solution-based calibration using a micronebulizer, which was inserted directly into the laser ablation chamber, was applied for validation of synthetic laboratory standard. The mass spectrometric analysis yielded an inhomogeneous distribution (layered structure) for P, S, Cu, and Zn in thin brain sections of the hippocampus. In contrast, Th and U are more homogeneously distributed at a low-concentration level with detection limits in the low-nanogram per gram range. The unique analytical capability and the limits of LA-ICPMS will be demonstrated for the imaging of element distribution in thin cross sections of brain tissue from the hippocampus. LA-ICPMS provides new information on the spatial element distribution of the layered structure in thin sections of brain tissues from the hippocampus.
Structure, Function, and Serology of the T-Cell Antigen Receptor Complex (1987)

Exhausted CD8 T (Tex) cells are a distinct cell lineage that arise during chronic infections and cancers in animal models and humans. Tex cells are characterized by progressive loss of effector functions, high and sustained inhibitory receptor expression, ...Read More
An Efficient Route to Either Enantiomer oftrans-2-Aminocyclopentanecarboxylic Acid (2001)

ADVERTISEMENT RETURN TO ISSUEPREVNoteNEXTAn Efficient Route to Either Enantiomer of trans-2-Aminocyclopentanecarboxylic AcidPaul R. LePlae, Naoki Umezawa, Hee-Seung Lee, and Samuel H. GellmanView Author Information Department of Chemistry, University of Wisconsin, Madison, Wisconsin 53706-1396 [email protected]Cite this: J. Org. Chem. 2001, 66, 16, 5629–5632Publication Date (Web):July 11, 2001Publication History Received12 March 2001Published online11 July 2001Published inissue 1 August 2001https://doi.org/10.1021/jo010279hCopyright © 2001 American Chemical SocietyRequest reuse permissionsArticle Views1796Altmetric-Citations67LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InReddit Read OnlinePDF (59 KB) Get e-AlertscloseSupporting Info (1)»Supporting Information Supporting Information SUBJECTS:Alcohols,Molecular structure,Reaction products,Redox reactions,Transfer reactions Get e-Alerts
Repeatability of redundant manipulators: mathematical solution of the problem (1988)

Consider a redundant manipulator whose hand is to trace a path in its workspace. A local control strategy that governs the manipulator is a law that assigns an infinitesimal change in the joint angles so that the hand will move infinitesimally in the direction designated by the path. Because of the redundancy, there can be many such control strategies. For some strategies it turns out that when the hand returns to its initial position, the joint angles do not always return to their initial values. To determine a priori whether a given local control strategy guarantees repeatability or not, it is necessary to deduce its global properties as well as its local properties. This is achieved by considering integral surfaces for a distribution in the joint space. This yields a necessary and sufficient condition, in terms of Lie brackets, for a control to be repeatable.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">&gt;</ETX>
Expression of cysteine‐rich C‐terminal domains of Pig Gastric Mucin in Pichia pastoris (2007)

Pig gastric mucin (PGM), a large secreted glycoprotein (10MDa) produced by the epithelial lining of the stomach, is responsible for the viscous properties of the mucus layer that protects and lubricates the gastric epithelium. The PGM cDNA is homologous to human MUC5AC, contains a large tandemly repeated Ser-Thr-Pro domain that is O-glycosylated and Cys-domains at the C-terminus that are globular, less glycosylated and contain von Willebrand factor subdomains (vWFd, vWFc, cystine-knot [CK]). The Cys-domains are important for the pH dependent gelation in PGM. To investigate the biophysical properties of these PGM domains, we have expressed them in the Pichia pastoris system. The C-terminus of PGM and its subdomains were amplified by domain specific PCR primers, cloned into pDEST911 and transfected into Pichia strain SMD1163. Resulting clones were screened for protein production by Western blot analysis using antibodies specific for PGM peptide core and human MUC5AC. His6-tagged peptides corresponding to the PGM C-terminus, vWFd, vWFc and CK were secreted in the medium with molecular weights 200, 160, 51, 30 kDa respectively, which reacted with the antibodies. All peptides exhibited evidence of disulfide linked multimer formation and glycosylation. We have successfully expressed PGM C-terminal peptides which will be used for biophysical investigations of PGM gelation. Study funding: NIH and NSF
Potent, Selective, and CNS-Penetrant Tetrasubstituted Cyclopropane Class IIa Histone Deacetylase (HDAC) Inhibitors (2015)

Potent and selective class IIa HDAC tetrasubstituted cyclopropane hydroxamic acid inhibitors were identified with high oral bioavailability that exhibited good brain and muscle exposure. Compound 14 displayed suitable properties for assessment of the impact of class IIa HDAC catalytic site inhibition in preclinical disease models.
Electro-optic sampling system for the testing of high-speed integrated circuits using a free running solid-state laser (1996)

This paper deals with the indirect electro-optic sampling technique for the low-invasive detection of periodical voltage waveforms on lines in high-speed integrated circuits. The system introduced here is based on a passive mode-coupled Ti:Sapphire-Laser as light source for generating optical pulses in the subpicosecond regime. Therefore, we have to synchronize the resulting electric measurement signal and its external trigger onto the pulse repetition rate of this free running solid-state laser. The multi user function of the laser system forces us to transmit the pulses via a single-mode fiber into the measurement setup. For that purpose we developed a special optical arrangement to minimize the widening of the pulses in the time domain. The system's high-temporal resolution of nearly 10 ps in combination with its high-voltage sensitivity of about 800 /spl mu/V//spl radic/(Hz) is demonstrated by measurements of an integrated microwave frequency divider.
Choosing a Cloning Vector (2003)

Since the construction of the first generation of general cloning vectors in the early 1970s, the number of plasmids created has increased to an almost countless number. Thus, a critical decision facing today’s investigator is that of which plasmid to use in a particular project? Despite the bewildering choice of commercial and other available vectors, the choice of which cloning vector to use can be decided by applying a small number of criteria: insert size, copy number, incompatibility, selectable marker, cloning sites, and specialized vector functions. Several of these criteria are dependent on each other. This chapter discusses these criteria in the context of choosing a plasmid for use as a cloning vector and Table 1 displays the features of some commonly used cloning vectors.
An Introduction to the Optical Spectroscopy of Inorganic Solids (2005)

This practical guide to spectroscopy and inorganic materials meets the demand from academia and the science community for an introductory text that introduces the different optical spectroscopic techniques, used in many laboratories, for material characterisation. * Treats the most basic aspects to be introduced into the field of optical spectroscopy of inorganic materials, enabling a student to interpret simple optical (absorption, reflectivity, emission and scattering) spectra * Contains simple, illustrative examples and solved exercises * Covers the theory, instrumentation and applications of spectroscopy for the characterisation of inorganic materials, including lasers, phosphors and optical materials such as photonics This is an ideal beginner's guide for students with some previous knowledge in quantum mechanics and optics, as well as a reference source for professionals or researchers in materials science, especially the growing field of optical materials.
Jun family members are controlled by a calcium-regulated, cyclosporin A-sensitive signaling pathway in activated T lymphocytes. (1993)

The octamer-binding transcription factor Oct-1 is involved in a wide variety of cellular processes but appears to lack a strong transcriptional activation domain, suggesting that it functions in the context of other proteins. We demonstrated previously that Oct-1, in association with a 40-kD protein, OAP40, contributes to the induction of interleukin-2 (IL-2), an early activation gene and major growth factor for T lymphocytes. Here we report that amino acid sequences obtained from purified OAP40 are identical to regions within JunD and c-Jun. We demonstrate that each of these Jun family members can participate in a complex that includes Oct-1 and a regulatory element in the IL-2 enhancer. In transient transfections, both JunD and c-Jun can contribute to activation-specific transcription mediated by this antigen receptor response element. These studies reveal a role, distinct from AP-1 activity, for Jun family members that is controlled by a calcium-triggered, cyclosporin A-sensitive mechanism.
Route Refresh Capability for BGP-4 (2000)

This document defines a new Border Gateway Protocol (BGP) capability termed 'Route Refresh Capability', which would allow the dynamic exchange of route refresh request between BGP speakers and subsequent re-advertisement of the respective Adj-RIB-Out. One possible application of this capability is to facilitate non-disruptive routing policy changes.
Current and Future Clinical Applications of Cardiac Positron Emission Tomography (2013)

Nuclear imaging, predominantly with single-photon emission tomography, has established and demonstrated value for the assessment of cardiovascular disease (CVD). Formerly, the clinical application of positron emission tomography (PET) was precluded by methodological complexity, high operating costs and lack of widespread availability. However, as PET and radiotracer development technologies have improved and continue to do so, PET is expected to become a mainstay diagnostic cardiovascular imaging modality. Not only is PET imaging of great importance for routine clinical decision-making and diagnosing CVD, it is also gaining prominence in fundamental and translational research models. The scope of this review is to summarize the state-of-the-art advances in PET imaging methodology, clinical utility and potential future application.
Recombinant Glycoproteins That Inhibit Complement Activation and Also Bind the Selectin Adhesion Molecules (1999)

Soluble human complement receptor type 1 (sCR1, TP10) has been expressed in Chinese hamster ovary (CHO) DUKX-B11 cells and shown to inhibit the classical and alternative complement pathways in vitro and in vivo. A truncated version of sCR1 lacking the long homologous repeat-A domain (LHR-A) containing the C4b binding site has similarly been expressed and designated sCR1[desLHR-A]. sCR1[desLHR-A] was shown to be a selective inhibitor of the alternative complement pathway in vitro and to function in vivo. In this study, sCR1 and sCR1[desLHR-A] were expressed in CHO LEC11 cells with an active alpha(1,3)-fucosyltransferase, which makes possible the biosynthesis of the sialyl-Lewisx (sLex) tetrasaccharide (NeuNAcalpha2-3Galbeta1-4(Fucalpha1-3)GlcNAc) during post-translational glycosylation. The resulting glycoproteins, designated sCR1sLex and sCR1[desLHR-A]sLex, respectively, retained the complement regulatory activities of their DUKX B11 counterparts, which lack alpha(1-3)-fucose. Carbohydrate analysis of purified sCR1sLex and sCR1[desLHR-A]sLex indicated an average incorporation of 10 and 8 mol of sLex/mol of glycoprotein, respectively. sLex is a carbohydrate ligand for the selectin adhesion molecules. sCR1sLex was shown to specifically bind CHO cells expressing cell surface E-selectin. sCR1[desLHR-A]sLex inhibited the binding of the monocytic cell line U937 to human aortic endothelial cells, which had been activated with tumor necrosis factor-alpha to up-regulate the expression of E-selectin. sCR1sLex inhibited the binding of U937 cells to surface-adsorbed P-selectin-IgG. sCR1sLex and sCR1[desLHR-A]sLex have thus demonstrated both complement regulatory activity and the capacity to bind selectins and to inhibit selectin-mediated cell adhesion in vitro.