gebhart/patrepeval huggingface dataset:
Review and perspective on ultrafast wavelength-size electro-optic modulators (2015)

As electronic device feature sizes scale-down, the power consumed due to onchip communications as compared to computations will increase dramatically; likewise, the available bandwidth per computational operation will continue to decrease. Integrated photonics can offer savings in power and potential increase in bandwidth for onchip networks. Classical diffraction-limited photonics currently utilized in photonic integrated circuits (PIC) is characterized by bulky and inefficient devices compared to their electronic counterparts due to weak light–matter interactions (LMI). Performance critical for the PIC is electro-optic modulators (EOM), whose performances depend inherently on enhancing LMIs. Current EOMs based on diffraction-limited optical modes often deploy ring resonators and are consequently bulky, photon-lifetime modulation limited, and power inefficient due to large electrical capacitances and thermal tuning requirements. In contrast, wavelength-scale EOMs are potentially able to surpass fundamental restrictions set by classical (i.e. diffraction-limited) devices via (a) high-index modulating materials, (b) nonresonant field and density-of-states enhancements such as found in metal optics, and (c) synergistic onchip integration schemes. This manuscript discusses challenges, opportunities, and early demonstrations of nanophotonic EOMs attempting to address this LMI challenge, and early benchmarks suggest that nanophotonic building blocks allow for densely integrated high-performance photonic integrated circuits.
Oxide Hemostatic Activity (2006)

The tunable in vitro blood clotting activity of high-surface-area hemostatic bioactive glass is evaluated by Thromboelastograph, a clinical instrument for quantifying changes in blood during coagulation. The hemostatic trends associated with hemostatic bioactive glass and a new preparation of spherical hemostatic bioactive glass, along with similar Si- and Ca-containing oxides, are described and related to Si:Ca ratios, Ca2+ availability and coordination environment, porosity, DeltaHHydration, and surface area. Hemostatic bioactive glass is a new material with an excellent efficacy for inducing hemostasis and is chemically distinct from the traditional bioglass employed for bone growth.
Camptothecins: a review of their development and schedules of administration (1998)

Used for centuries in traditional Chinese medicine, camptothecin was rediscovered in the 1950s during a search for compounds that could be used as a source for steroid synthesis. Due to its limited water solubility, a sodium salt was used in the early clinical trials. The severe toxicity and erratic absorption relegated this compound to the research laboratory until the 1980s when the topoisomerase enzyme was identified as the cellular target of camptothecin, the topoisomerase enzyme was found to be overexpressed in cancer cells and a structure-activity relationship was determined for camptothecin. These new developments brought the camptothecins back to the clinical setting for further testing. The various analogues that have been most studied to date include: irinotecan (CPT-11), and its derivative SN-38, topotecan, and 9-aminocamptothecin. Numerous trials have been conducted in an attempt to establish the efficacy in various tumour types, to determine the dose-limiting toxicity and to define the optimal schedule of administration. It seems that large doses of these drugs given on intermittent schedules are not effective. Our hypothesis is that the camptothecins require a prolonged schedule of administration given continuously at low doses or frequent intermittent dosing schedules to be most effective. With these schedules, normal haematopoietic cells and mucosal progenitor cells with low topoisomerase I levels may be spared, while efficacy is preserved.
The Philistines and Acculturation: Culture Change and Ethnic Continuity in the Iron Age (1995)

Acculturation influenced the development of Philistine culture for its entire 600-year history. Using an anthropological approach to examine archaeological and textual data, this article develops a model of the process of Philistine acculturation, which eventually led to the "Levantization" of Philistine culture. It concludes that the commonly held assumptions that the Philistines "lost their cultural core" or assimilated into Canaanite society are unjustified. The Philistines absorbed many outside cultural influences, but they modified those influences to suit their own needs and retained a distinct cultural and political identity throughout the Iron Age. The case of Philistine acculturation provides an excellent opportunity to demonstrate how archaeologists working in Syria-Palestine can contribute to, and benefit from, anthropological research while addressing historical problems.
Asymmetric Syntheses of Protected Derivatives of Carnosadine and Its Stereoisomers as Conformationally Constrained Surrogates for Arginine (1994)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTAsymmetric Syntheses of Protected Derivatives of Carnosadine and Its Stereoisomers as Conformationally Constrained Surrogates for ArginineKevin Burgess, Dongyeol Lim, Kwok-Kan Ho, and Chun-Yen KeCite this: J. Org. Chem. 1994, 59, 8, 2179–2185Publication Date (Print):April 1, 1994Publication History Published online1 May 2002Published inissue 1 April 1994https://pubs.acs.org/doi/10.1021/jo00087a039https://doi.org/10.1021/jo00087a039research-articleACS PublicationsRequest reuse permissionsArticle Views562Altmetric-Citations55LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-AlertscloseSupporting Info (1)»Supporting Information Supporting Information Get e-Alerts
Bone marrow transplantation in Gaucher's disease: effect of mixed chimeric state. (1994)

The effective dose and schedule of enzyme replacement therapy for Gaucher's disease have not been definitely established. We report a case of mixed chimeric state in an allogeneic BMT patient and followed her clinical and laboratory progress. The result shows that a low but sustained glucocerebrosidase level may provide symptomatic relief for this lysosomal disorder.
Insertion of disease-causing mutations in BACs by homologous recombination in Escherichia coli (2000)

We have used GET Recombination, an inducible homologous recombination system for Escherichia coli, to insert one of the most common thalassaemia mutations into the intact beta-globin locus in a second generation BAC vector. We first inserted a PCR fragment carrying the tetracycline resistance gene (TetR) into the beta-globin gene. All recombinant clones examined contained the TetR gene at the correct target site. Next, a PCR fragment with the IVS I-110 G-->A splicing mutation but no selectable marker was used to replace the TetR gene in a second round of GET Recombination. Recombinant clones were selected by plating on medium containing chlorotetracycline and fusaric acid. Although counterselection for the TetR gene is not very efficient, four recombinant colonies with the IVS I-110 mutation were identified among 480 clones screened. Analysis of the recombinant clones did not show any other modifications or rearrangements. Thus the TetR gene can be used in combination with GET Recombination to introduce point mutations and other modifications in BACs without leaving behind any operational sequences, in order to generate accurate cell and transgenic mouse models for various diseases.
Glucose homeostasis and drugs acting on CNS: Interactions with antidiabetic agents (1994)

Alteration in glucose homeostasis by the drugs acting on CNS in euglycemic or diabetic patients may pose problems for treating physicians while interpreting the data on blood sugar levels. The problem may be further aggrevated in diabetic patients maintained on antidiabetic agents because this may adversely affect the course of the disease especially in persons on long term therapy with CNS active drugs. Since this is a group of drugs with diverse chemical structure and varied pharmacodynamic/pharmacokinetic properties, no single mechanism can be ascribed in each of the reported cases. This article is an attempt to discuss the available literature and probable mechanisms involved in modification of glucose homeostasis by CNS active agents and their interaction with antidiabetic drugs.
GrubJoin: An Adaptive, Multi-Way, Windowed Stream Join with Time Correlation-Aware CPU Load Shedding (2007)

Tuple dropping, though commonly used for load shedding in most data stream operations, is generally inadequate for multiway windowed stream joins. The join output rate can be unnecessarily reduced because tuple dropping fails to exploit the time correlations that are likely to exist among interrelated streams. In this paper, we introduce GrubJoin-an adaptive multiway windowed stream join that effectively performs time correlation-aware CPU load shedding. GrubJoin maximizes the output rate by achieving near-optimal window harvesting, which picks only the most profitable segments of individual windows for the join. Due mainly to the combinatorial explosion of possible multiway join sequences involving different window segments, GrubJoin faces unique challenges that do not exist for binary joins, such as determining the optimal window harvesting configuration in a time-efficient manner and learning the time correlations among the streams without introducing overhead. To tackle these challenges, we formalize window harvesting as an optimization problem, develop greedy heuristics to determine near-optimal window harvesting configurations, and use approximation techniques to capture the time correlations. Our experimental results show that GrubJoin is vastly superior to tuple dropping when time correlations exist and is equally effective when time correlations are nonexistent.
FUS3 represses CLN1 and CLN2 and in concert with KSS1 promotes signal transduction. (1991)

FUS3 is functionally redundant with KSS1, a homologous yeast protein kinase, for a step(s) in signal transduction between the beta subunit of the guanine nucleotide binding protein (G protein), STE4, and the mating type-specific transcriptional activator, STE12. Either FUS3 or KSS1 can execute this function; when neither gene encoding these protein kinases is present, signal transduction is blocked, causing sterility. This functional redundancy is strain dependent; some standard laboratory strains (S288C) are kss1-. FUS3 has additional functions required for cell cycle arrest and vegetative growth that do not overlap with KSS1 functions. FUS3 mediates cell cycle arrest during mating through transcriptional repression of two G1 cyclins (CLN1 and CLN2) and through posttranscriptional inhibition of a third G1 cyclin (CLN3). FUS3 is also required for vegetative growth in haploid strains dependent upon CLN3 for cell cycle progression but is not required in strains dependent upon either CLN1 or CLN2, suggesting a functional divergence among the three G1 cyclins. The diverse roles for FUS3 suggest that the FUS3 protein kinase has multiple substrates, some of which may be shared with KSS1.
Development of antiangiogenin peptide using a phage-displayed peptide library. (1997)

Angiogenesis is essential for tumor growth and metastasis. Here, we have developed a peptide antagonist of human angiogenin, which is a potent and tumor-associated angiogenic factor. ANI-E peptide was derived from the phage clone, which binds to angiogenin via the disulfide-constrained octapeptide epitope that is displayed on its surface, and is displaced by actin. Disulfide-constrained ANI-E peptide inhibits the interaction of angiogenin with actin, which is regarded as the angiogenin-binding protein on the surface of endothelial cells, without any visible effect on the ribonucleolytic activity of angiogenin. The peptide also inhibits the neovascularization that is induced by angiogenin in the chick chorioallantoic membrane assay. The antiangiogenic activity of the peptide is specific for angiogenin because the peptide does not have any apparent effect on embryonic angiogenesis or the preexisting blood vessels. The disulfide bond and the glutamic acid inside the disulfide ring of ANI-E peptide are indispensable for its antiangiogenin activity. Furthermore, ANI-E peptide blocks the angiogenesis that is induced by the angiogenin-secreting PC3 human prostate adenocarcinoma cells, without any direct effect on the proliferation, as well as the adhesion of PC3 cells to angiogenin. Therefore, the inhibition of the tumor-induced angiogenesis by ANI-E peptide is most likely caused by the neutralization of the extracellular angiogenin that is secreted by PC3 cells. On the basis of our results, ANI-E peptide may be effective for the treatment of various human tumors that secrete angiogenin. Our results also strongly support the hypothesis that the interaction of angiogenin with the cell surface actin-like protein is essential for the biological action of angiogenin, and angiogenin has an essential role in tumor-induced angiogenesis.
Incorporation of two nonnatural amino acids into proteins through extension of the genetic code (1999)

A novel method of the in vitro incorporation of two nonnatural amino acids into proteins through extension of the genetic code was developed. The streptavidin mRNA containing AGGU and CGGG, and chemically aminoacylated tRNA(ACCU) and tRNA(CCCG) were prepared, then they were added into E. coli in vitro protein synthesizing system. As a result, two nonnatural amino acids were successfully incorporated into desired sites of streptavidin.
Gastrointestinal stromal tumors with KIT mutations exhibit a remarkably homogeneous gene expression profile. (2001)

Gastrointestinal stromal tumors (GISTs), the most common mesenchymal tumors of the digestive tract, are believed to arise from the interstitial cells of Cajal. GISTs are characterized by mutations in the proto-oncogene KIT that lead to constitutive activation of its tyrosine kinase activity. The tyrosine kinase inhibitor STI571, active against the BCR-ABL fusion protein in chronic myeloid leukemia, was recently shown to be highly effective in GISTs. We used 13,826-element cDNA microarrays to define the expression patterns of 13 KIT mutation-positive GISTs and compared them with the expression profiles of a group of spindle cell tumors from locations outside the gastrointestinal tract. Our results showed a remarkably distinct and uniform expression profile for all of the GISTs. In particular, hierarchical clustering of a subset of 113 cDNAs placed all of the GIST samples into one branch, with a Pearson correlation >0.91. This homogeneity suggests that the molecular pathogenesis of a GIST results from expansion of a clone that has acquired an activating mutation in KIT without the extreme genetic instability found in the common epithelial cancers. The results provide insight into the histogenesis of GIST and the clinical behavior of this therapeutically responsive tumor.
Factors predicting abnormal hysterosalpingographic findings in patients treated for acute pelvic inflammatory disease (1985)

One hundred forty-six consecutive inpatients with acute pelvic inflammatory disease (PID) were randomly treated either with the combination of doxycycline and metronidazole or with the combination of penicillin G/amoxicillin and metronidazole. Forty-three women underwent hysterosalpingography (HSG) 6 months after the treatment, and a multivariate statistical analysis was used to study the effect of 11 different variables (parity, history of previous abortion, history of previous PID, use of an intrauterine contraceptive device (IUD), use of oral contraceptives, presence of adnexal mass, results of cervical cultures for Neisseria gonorrhoeae, and Chlamydia trachomatis, presence of serum antichlamydial antibodies, penicillin-metronidazole treatment, and doxycyclin-metronidazole treatment) on the hysterosalpingographic findings. Abnormal HSG was most likely to occur in women who had antichlamydial antibodies present in the serum, an adnexal mass detected on the initial bimanual examination, or had an IUD (positive associations) and least likely to occur in women who had been treated with the combination of doxycycline and metronidazole (negative association).
Curiosity-Driven Exploration by Self-Supervised Prediction (2017)

In many real-world scenarios, rewards extrinsic to the agent are extremely sparse, or absent altogether. In such cases, curiosity can serve as an intrinsic reward signal to enable the agent to explore its environment and learn skills that might be useful later in its life. We formulate curiosity as the error in an agent's ability to predict the consequence of its own actions in a visual feature space learned by a self-supervised inverse dynamics model. Our formulation scales to high-dimensional continuous state spaces like images, bypasses the difficulties of directly predicting pixels, and, critically, ignores the aspects of the environment that cannot affect the agent. The proposed approach is evaluated in two environments: VizDoom and Super Mario Bros. Three broad settings are investigated: 1) sparse extrinsic reward; 2) exploration with no extrinsic reward; and 3) generalization to unseen scenarios (e.g. new levels of the same game).
Stretchable Microfluidic Radiofrequency Antennas (2010)

Highly stretchable and robust antennas are fabricated by injecting liquid metal into a microfluidic channel that consists of two types of silicone rubber with different stiffness. The resulting antennas exhibit high mechanical stability under strain, while retaining high stretchability; these antennas can be stretched by up to a tensile strain of 120 % with little degradation in radiation efficiency. Detailed facts of importance to specialist readers are published as ”Supporting Information”. Such documents are peer-reviewed, but not copy-edited or typeset. They are made available as submitted by the authors. Please note: The publisher is not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing content) should be directed to the corresponding author for the article.
Serum autotaxin is increased in pruritus of cholestasis, but not of other origin, and responds to therapeutic interventions (2012)

Serum ATX activity is specifically increased in patients with cholestatic, but not other forms of, systemic pruritus and closely correlates with the effectiveness of therapeutic interventions. The beneficial antipruritic action of RMP may be explained, at least partly, by the PXR-dependent transcriptional inhibition of ATX expression. Thus, ATX likely represents a novel therapeutic target for pruritus of cholestasis.
Spintronics: A Spin-Based Electronics Vision for the Future (2001)

This review describes a new paradigm of electronics based on the spin degree of freedom of the electron. Either adding the spin degree of freedom to conventional charge-based electronic devices or using the spin alone has the potential advantages of nonvolatility, increased data processing speed, decreased electric power consumption, and increased integration densities compared with conventional semiconductor devices. To successfully incorporate spins into existing semiconductor technology, one has to resolve technical issues such as efficient injection, transport, control and manipulation, and detection of spin polarization as well as spin-polarized currents. Recent advances in new materials engineering hold the promise of realizing spintronic devices in the near future. We review the current state of the spin-based devices, efforts in new materials fabrication, issues in spin transport, and optical spin manipulation.
The characterisation of clinical isolates of Staphylococcus aureus in Ile-Ife, Nigeria (1991)

Of 166 strains of Staphylococcus aureus isolated from hospital patients and staff in Ile-Ife, Nigeria, 32% were non-typable (NT). The strains were isolated from skin lesions, eye infections, wounds and nasal flora. Isolates from skin lesions or eye and wound infections were more likely to produce protease (95% and 78% respectively) than nasal isolates (11%). Nearly all (99%) of the strains isolated were resistant to penicillin and 78% were resistant to tetracycline. Streptomycin resistance occurred in 25% of isolates; 19% were resistant to chloramphenicol and 9% to methicillin.
A cis-acting function for the coronavirus leader in defective interfering RNA replication (1994)

To test the hypothesis that the 65-nucleotide (nt) leader on subgenomic mRNAs suffices as a 5'-terminal cis-acting signal for RNA replication, a corollary to the notion that coronavirus mRNAs behave as replicons, synthetic RNA transcripts of a cloned, reporter-containing N mRNA (mRNA 7) of the bovine coronavirus with a precise 5' terminus and a 3' poly(A) of 68 nt were tested for replication after being transfected into helper virus-infected cells. No replication was observed, but synthetic transcripts of a cloned reporter-containing defective interfering (DI) RNA differing from the N mRNA construct by 433 nt of continuous 5'-proximal genomic sequence between the leader and the N open reading frame did replicate and become packaged, indicating the insufficiency of the leader alone as a 5' signal for replication of transfected RNA molecules. The leader was shown to be a necessary part of the cis-acting signal for DI RNA replication, however, since removal of terminal bases that destroyed a predicted intraleader stem-loop also destroyed replicating ability. Surprisingly, when the same stem-loop was disrupted by base substitutions, replication appeared only minimally impaired and the leader was found to have rapidly reverted to wild type during DI RNA replication, a phenomenon reminiscent of high-frequency leader switching in the mouse hepatitis coronavirus. These results suggest that once a minimal structural requirement for leader is fulfilled for initiation of DI RNA replication, the wild-type leader is strongly preferred for subsequent replication. They also demonstrate that, in contrast to reported natural mouse hepatitis coronavirus DI RNAs, the DI RNA of the bovine coronavirus does not require sequence elements originating from discontinuous downstream regions within the polymerase gene for replication or for packaging.