gebhart/patrepeval huggingface dataset:
Estrogenic modulation of brain activity: implications for schizophrenia and Parkinson’s disease (2002)

Evidence suggests the estrogens may play a role in various mental and neurodegenerative diseases. We review the evidence implicating estradiol in schizophrenia and Parkinson's disease. Epidemiologic and clinical studies on the effects of estrogens in schizophrenia are surveyed, and animal studies and in vitro models of the modulatory effects of estrogens on neurotransmitters associated with schizophrenia (i.e., dopamine, serotonin, glutamate) are reviewed. Epidemiologic and clinical data suggesting a role for estrogens in Parkinson's disease and in vivo and in vitro models demonstrating neuroprotective effects of estrogens are then examined. Despite the numerous animal studies on the effects of estrogens in the brain, clinical data are sparse and often contradictory. Compounds with more specific and potent estrogenic activity in the brain are required to further research efforts in this area. Possible candidates are the selective estrogen receptor modulators (SERMs), whose agonist or antagonist properties depend on the target tissue. The effects of various SERMs in the brain are reviewed, and our novel findings on the effects of SERMs on 5-HT2A receptors in the rat cortex and nucleus accumbens are presented. We suggest that drugs with estrogenic activity in the brain may have therapeutic potential, either by modulating brain neurotransmission or through neuroprotective activity.
Characterization of type IV collagen NC1 monomers and Goodpasture antigen in human renal basement membranes. (1990)

Monomeric subunits of the globular domain of type IV collagen from human renal basement membrane were isolated and characterized. The monomers, M24, M26, M28+, and M28 , which have been identified previously in human glomerular basement membrane, were characterized by amino acid analysis, amino-terminal sequencing, and electrophoretic mobility. The results indicate that M24 and M26 are derived from alpha 1(IV) and alpha 2(IV) collagen chains, respectively. Amino-terminal sequencing revealed that M28+, and M28 correspond to the globular domain of novel collagen chains. M28 has been characterized as the principal target antigen in Goodpasture's syndrome and antiglomerular basement membrane (GBM) nephritis, and both M28 species are absent from the GBM in Alport familial nephritis. The cationic charge of M28 appears to be a consequence of a relatively high concentration of basic amino acids when compared with other monomers. Previous studies of bovine GBM have demonstrated chains with amino-terminal sequence homology to M28+ and M28 .
Acute Measles Infection in the Hamster Cochlea (1994)

Measles virus has been implicated in sudden sensorineural hearing loss (SNHL) in adults as well as in children. Furthermore, sensorineural hearing loss following live measles virus vaccination has been reported. As of yet, however, there has been only few reports on human temporal bone pathology due to measles, and on experimental animal models of measles infection. This study was undertaken to examine acute measles infection in adult hamster cochlea morphologically and immunohistochemically for precise understanding of this viral infection. Atrophy of the stria vascularis, loss of the organ of Corti, "rolled-up" tectorial membrane, and cell infiltration with a positive immunofluorescent reaction primarily within the scale media indicating endolymphatic labyrinthitis were the principal findings. These results were generally consistent with previous ones on human temporal bone pathology not only due to measles but also to SNHL. We consider measles virus to be one of the possible pathogens, even if low in frequency, causing profound and irreversible hearing loss, including SNHL. Completion of measles vaccination without complication and selective or mass revaccination may be necessary to prevent such hearing loss.
Technical Aspects of Peripheral Nerve Stimulation: Hardware and Complications (2011)

Although commonly used in clinical practice, peripheral nerve stimulation (PNS) for treatment of chronic pain is performed mainly with devices developed and marketed for spinal cord stimulation applications. This may be one of the reasons why PNS approach is marked by a very high complication rate, as the anatomy of peripheral nerves and the surrounding soft tissues is quite different from epidural spinal space for which the current devices are designed. The chapter reviews integral components of PNS systems and accessories. It also lists variety of complications observed with PNS approach and points to the ways to minimize their incidence. Based on the literature data and the analysis of the author's experience with PNS procedures it appears that although the rate of complications is relatively high, the morbidity associated with PNS approach is very minor and most problems may be resolved with simple re-operations, usually on outpatient basis. The reduction in complication rate is expected to occur when the hardware used in PNS procedures is appropriately adapted for PNS applications.
Ring Contraction vs Fragmentation in the Intramolecular Reactions of 3-O-(Trifluoromethanesulfonyl)pyranosides. Efficient Synthesis of Branched-Chain Furanosides (1995)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTRing Contraction vs Fragmentation in the Intramolecular Reactions of 3-O-(Trifluoromethanesulfonyl)pyranosides. Efficient Synthesis of Branched-Chain FuranosidesMohamed Kassou and Sergio CastillonCite this: J. Org. Chem. 1995, 60, 14, 4353–4358Publication Date (Print):July 1, 1995Publication History Published online1 May 2002Published inissue 1 July 1995https://pubs.acs.org/doi/10.1021/jo00119a011https://doi.org/10.1021/jo00119a011research-articleACS PublicationsRequest reuse permissionsArticle Views208Altmetric-Citations15LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts
Hydraulic Fracturing: History of an Enduring Technology (2010)

Hydraulic Fracturing Editor’s note: In 2006, SPE honored nine pioneers of the hydraulic fracturing industry as Legends of Hydraulic Fracturing. Claude E. Cooke Jr., Francis E. Dollarhide, Jacques L. Elbel, C. Robert Fast, Robert R. Hannah, Larry J. Harrington, Thomas K. Perkins, Mike Prats, and H.K. van Poollen were recognized as instrumental in developing new technologies and contributing to the advancement of the field through their roles as researchers, consultants, instructors, and authors of ground-breaking journal articles. Following is an excerpt from SPE’s new Legends of Hydraulic Fracturing CDROM, which contains an extended overview of the history of the technology, list of more than 150 technical papers published by these industry legends, personal reflections from a number of the Legends and their colleagues, and historic photographs. For more information on the CDROM, please go to http://store.spe.org/Legendsof-Hydraulic-Fracturing-P433.aspx. Since Stanolind Oil introduced hydraulic fracturing in 1949, close to 2.5 million fracture treatments have been performed worldwide. Some believe that approximately 60% of all wells drilled today are fractured. Fracture stimulation not only increases the production rate, but it is credited with adding to reserves—9 billion bbl of oil and more than 700 Tscf of gas added since 1949 to US reserves alone—which otherwise would have been uneconomical to develop. In addition, through accelerating production, net present value of reserves has increased. Fracturing can be traced to the 1860s, when liquid (and later, solidiﬁed) nitroglycerin (NG) was used to stimulate shallow, hard rock wells in Pennsylvania, New York, Kentucky, and West Virginia. Although extremely hazardous, and often used illegally, NG was spectacularly successful for oil well “shooting.” The object of shooting a well was to break up, or rubblize, the oil-bearing formation to increase both initial flow and ultimate recovery of oil. This same fracturing principle was soon applied with equal effectiveness to water and gas wells. In the 1930s, the idea of injecting a nonexplosive ﬂuid (acid) into the ground to stimulate a well began to be tried. The “pressure parting” phenomenon was recognized in well-acidizing operations as a means of creating a fracture that would not close completely because of acid etching. This would leave a flow channel to the well and enhance productivity. The phenomenon was conﬁrmed in the ﬁeld, not only with acid treatments, but also during water injection and squeeze-cementing operations.
Natural Outbreak of a Bacterial Fruit Rot of Cantaloupe in Georgia Caused by Acidovorax avenae subsp. citrulli (2000)

In April and July 1999, cantaloupe plants (Cucumis melo) from commercial greenhouses and fields in Grady, Colquitt, Mitchell, and Tift counties, GA, exhibited severe foliar necrosis and a fruit rot. Foliar symptoms were V-shaped, necrotic lesions occurring at the margin of the leaf and extending inward toward the midrib. Symptoms on the fruit surface were observed after net development and occurred randomly as round, necrotic, sunken spots or cracks a few millimeters in diameter. A soft rot originating from lesions on the surface of the fruit expanded into the flesh. Approximately 5% of the fruits were affected. Bacteria recovered from cantaloupe fruit and leaf tissues produced nonfluorescent, smooth, off-white colonies on King's medium B. Characteristic of Acidovorax avenae subsp. citrulli, the bacteria produced pits in carboxymethyl cellulose media (WFB 44), and reduced Tween 80 to give a visible precipitate on WFB 68 media (1). Based on fatty acid analysis, all strains were identified as A. avenae subsp. citrulli by Microbial Identification System software, version 3.6 (MIDI, Newark, DE), and similarity indices of 0.06, 0.79, 0.21, and 0.43 were recorded for strains recovered form Grady, Tift, Colquitt, and Mitchell counties, respectively. Using specific oligonucleotide primers (WFB 1/2) (2), PCR conducted on DNA from each strain yielded a 390-bp DNA fragment, confirming similarity to A. avenae subsp. citrulli. Indirect enzyme-linked immunosorbent assay with genus-specific antibodies also verified that the bacteria were Acidovorax spp. Pathogenicity of the A. avenae subsp. citrulli strains was confirmed by inoculating and observing symptom development on 2-week-old watermelon seedlings. Although all strains were identified and confirmed as A. avenae subsp. citrulli, restriction fragment length polymorphism data indicated that the Tift County strain was distinguishable from the others, suggesting that inoculum for these outbreaks may have originated from at least two different sources. References: (1) R. D. Gitaitis. 1993. Development of a seedborne assay for watermelon fruit botch. Pages 9-18 in: Proc. 1st Int. Seed Testing Assoc. Plant Dis. Commit., Ottawa, Canada. (2) R. R. Walcott and R. D. Gitaitis. (Abstr.) Phytopathology 88(suppl.):S92, 1998.
Bayes nets in educational assessment: Where the numbers come from (1999)

As observations and student models become complex, educational assessments that exploit advances in technology and cognitive psychology can outstrip familiar testing models and analytic methods. Within the Portal conceptual framework for assessment design, Bayesian inference networks (BINs) record beliefs about students’ knowledge and skills, in light of what they say and do. Joining evidence model BIN fragments—which contain observable variables and pointers to student model variables—to the student model allows one to update belief about knowledge and skills as observations arrive. Markov Chain Monte Carlo (MCMC) techniques can estimate the required conditional probabilities from empirical data, supplemented by expert judgment or substantive theory. Details for the special cases of item response theory (IRT) and multivariate latent class modeling are given, with a numerical example of the latter. 1
Interactions Between Chloride and Sulfate or Silica Removals from Wastewater Using an Advanced Lime‐Aluminum Softening Process: Equilibrium Modeling (2007)

Interactions among chloride, sulfate, and silica removals from recycled industrial wastewater using an ultra-high lime with aluminum process (UHLA) were studied. An equilibrium model that is able to accurately predict the chemical behavior and interactions between chloride and sulfate or silica with UHLA at various initial conditions and chemical reagents was developed. X-ray diffraction (XRD) analysis was conducted to identify the precipitated solids formed in the UHLA process. Model predictions indicated that simultaneous removal of sulfate and chloride can be best described by the formation of a solid solution containing calcium chloroaluminate, calcium sulfoaluminate (ettringite), calcium monosulfate, tricalcium hydroxyaluminate, and tetracalcium hydroxyaluminate. However, simultaneous removal of silica and chloride can be best described by precipitation of calcium silicate and calcium aluminosilicate in addition to a solid solution containing calcium chloroaluminate, tricalcium hydroxyaluminate, and tetracalcium hydroxyaluminate. The XRD results indicated the presence of the same solids assumed by the equilibrium model.
The Oxidation of Amino Acids by Hydrogen Peroxide in Formic Acid (1942)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTThe Oxidation of Amino Acids by Hydrogen Peroxide in Formic AcidGerrit Toennies and Richard P. HomillerCite this: J. Am. Chem. Soc. 1942, 64, 12, 3054–3056Publication Date (Print):December 1, 1942Publication History Published online1 May 2002Published inissue 1 December 1942https://doi.org/10.1021/ja01264a518Request reuse permissionsArticle Views992Altmetric-Citations124LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InReddit PDF (332 KB) Get e-Alertsclose Get e-Alerts
Long‐Lived Planar Lipid Bilayer Membranes Anchored to an In Situ Polymerized Hydrogel (2007)

Bilayer membranes that are covalently conjugated in situ to an encapsulating hydrogel have been formed. These membranes are extremely long-lived, lasting over ten days in standard laboratory conditions, and are sufficiently fluid to support protein incorporation. Supporting information for this article is available on the WWW under http://www.wiley-vch.de/contents/jc_2089/2008/c0810_s.pdf or from the author. Please note: The publisher is not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing content) should be directed to the corresponding author for the article.
iDataGuard (2008)

Businesses that provide data storage facilities on the internet (IDP) have exploded recently. Such businesses provide the following benefits to end users: a) anytime, anywhere access to data; b) low cost; and c) good quality of service. Examples of data storage providers include Amazon S3 service, Windows SkyDrive, Nirvarnix, etc.
Kallikrein-related peptidases: proteolysis and signaling in cancer, the new frontier (2010)

The exact mechanism(s) by which kallikrein-related peptidases (KLKs) function, their levels of activity and their potential endogenous targets in vivo have only recently begun to be revealed. Our group and others have shown that KLKs can have hormonal properties by signaling via proteinase-activated receptors (PARs), a family of G-protein-coupled receptors. Signals by PAR(1), PAR(2), and PAR(4) can regulate calcium release or mitogen-activated protein kinase activation and lead to platelet aggregation, vascular relaxation, cell proliferation, cytokine release, and inflammation. We have further documented the presence of active KLK6 and 10 (by activity-based ELISA or proteomics) and the presence of proteinase inhibitors, such as alpha(1)-antitrypsin, in cancer-derived fluids. We suggest that tumors and inflamed tissues can release active KLKs, which are under tight regulation by proteinase inhibitors. These enzymes can potentially control cell/tissue behavior by regulating PAR activation in specific settings and disease stages.
Structure and synthesis of dihydroxypentyluracil from bacteriophage SP-15 deoxyribonucleic acid (1973)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTStructure and synthesis of dihydroxypentyluracil from bacteriophage SP-15 deoxyribonucleic acidH. Hayashi, K. Nakanishi, C. Brandon, and J. MarmurCite this: J. Am. Chem. Soc. 1973, 95, 26, 8749–8757Publication Date (Print):December 1, 1973Publication History Published online1 May 2002Published inissue 1 December 1973https://doi.org/10.1021/ja00807a041RIGHTS & PERMISSIONSArticle Views846Altmetric-Citations73LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InReddit PDF (1 MB) Get e-Alertsclose Get e-Alerts
Taxonomic relationships of the [Pasteurella] haemolytica complex as evaluated by DNA-DNA hybridizations and 16S rRNA sequencing with proposal of Mannheimia haemolytica gen. nov., comb, nov., Mannheimia granulomatis comb. nov., Mannheimia glucosida sp. nov., Mannheimia ruminalis sp. nov. and Mannheimia varigena sp. nov. (1999)

The present paper presents the conclusions of a polyphasic investigation of the taxonomy of the trehalose-negative [Pasteurella] haemolytica complex. Clusters previously identified by ribotyping and multilocus enzyme electrophoresis (MEE) have been evaluated by 16S rRNA sequencing and DNA-DNA hybridizations. Results obtained by the different techniques were highly related and indicated that the [P.] haemolytica complex contains distinct genetic and phenotypic groups. At least seven species were outlined, five of which were named. We refrained in formal naming of more groups until additional strains are characterized. Five 16S rRNA clusters were identified corresponding to distinct lineages previously outlined by MEE. Within 16S rRNA cluster I two distinct genotypic groups have been outlined in addition to [P.] haemolytica sensu stricto (biogroup 1). Each of the clusters II, III, IV and V represent at least one new species. The investigations underline that [P.] haemolytica sensu stricto only contains strains that do not ferment L-arabinose even though they are referred to as 'biotype A' of [P.] haemolytica. The five 16S rRNA clusters identified had a common root relative to the other species within the family Pasteurellaceae, and the overall sequence similarity among these five clusters was higher than what is observed within the existing genera of the family. The allocation of the trehalose-negative [P.] haemolytica complex to a new genus seems to be indicated. Based on the polyphasic investigation performed a new genus Mannheimia is proposed for the trehalose-negative [P.] haemolytica complex. At the present stage two previously named species are transferred to this new genus and three new species are described. [P.] haemolytica is reclassified as Mannheimia haemolytica comb. nov., whereas Pasteurella granulomatis, Bisgaard taxon 20 and [P.] haemolytica biovar 3J are reclassified and combined in the species Mannheimia granulomatis comb. nov. Mannheimia glucosida sp. nov. corresponds to [P.] haemolytica biogroups 3A-3H and the beta-glucosidase and meso-inositol-positive strains of [P.] haemolytica biogroup 9. All typable strains within M. glucosida belong to serotype 11. Mannheimia ruminalis sp. nov. consists of strains previously classified as Bisgaard taxon 18 and [P.] haemolytica biogroup 8D. Finally, Mannheimia varigena sp. nov. includes [P.] haemolytica biogroup 6 as well as Bisgaard taxon 15 and Bisgaard taxon 36. The type strains are NCTC 9380T (M. haemolytica), ATCC 49244T (M. granulomatis), CCUG 38457T = P925T (M. glucosida), CCUG 38470T = HPA92T (M. ruminalis) and CCUG 38462T = 177T (M. varigena).
Identification of mutations leading to the Lesch-Nyhan syndrome by automated direct DNA sequencing of in vitro amplified cDNA. (1989)

The Lesch-Nyhan (LN) syndrome is a severe X chromosome-linked disease that results from a deficiency of the purine salvage enzyme hypoxanthine phosphoribosyltransferase (HPRT). The mutations leading to the disease are heterogeneous and frequently arise as de novo events. We have identified nucleotide alterations in 15 independently arising HPRT-deficiency cases by direct DNA sequencing of in vitro amplified HPRT cDNA. We also demonstrate that the direct DNA sequence analysis can be automated, further simplifying the detection of new mutations at this locus. The mutations include DNA base substitutions, small DNA deletions, a single DNA base insertion, and errors in RNA splicing. The application of these procedures allows DNA diagnosis and carrier identification by the direct detection of the mutant alleles within individual families affected by LN.
Further Preparation of Steroidal Diosphenols. I. Synthesis of Some 4, 4-Dimethyl-2-hydroxy-3-oxo-1-ene Steroids in Androstane and Pregnane Series (1968)

Some 2-hydroxy-3-oxo-4, 4-dimethyl-1-ene steroids and two 4-hydroxy-3-oxo-2, 2-dimethyl-4-ene steroids were prepared in order to obtain anti-tumor substances against sex hormone dependent cancer such as breast cancer and prostatic cancer. These diosphenols were synthesized by the autoxidation of the corresponding 3-oxo steroids in the presence of potassium tert-butoxide in tert-butanol.