gebhart/patrepeval huggingface dataset:
Aqueous Dispersion of Graphene Sheets Stabilized by Pluronic Copolymers: Formation of Supramolecular Hydrogel (2009)

A facile approach to disperse graphene in aqueous solution is described. Triblock copolymers (PEO-b-PPO-b-PEO) were employed as the solubilizing agent for chemically exfoliated graphite oxide, and graphene formed through in situ reduction by hydrazine. The formation of the stable aqueous copolymer-coated graphene solution is due to the noncovalent interaction between the hydrophobic PPO segments of the triblock copolymer and the hydrophobic graphene surface, whereas the hydrophilic PEO chains extend into water. It was characterized by atomic force microscopy (AFM), X-ray photoelectron spectroscopy (XPS), and Raman spectroscopy. Utilizing the dual roles of Pluronic copolymer in dispersing graphene in aqueous solution and forming supramolecular hydrogel with α-cyclodextrin through the penetration of PEO chains into the cyclodextrin cavities, we further developed a facile and effective method to hybridize the well-dispersed graphene into a supramolecular hydrogel, which was investigated by a variety of techniques, such as X-ray diffraction (XRD), differential scanning calorimetry (DSC), thermogravimetric analysis (TGA), scanning electron microscopy (SEM), and rheometer. The supramolecular hybrid hydrogel possessed a cross-linked network and showed shear-thinning properties. The viscosity and strength of the supramolecular hybrid hydrogels decreased significantly as compared to those of the native hydrogel resulting from the lamellar structure of the hybrid hydrogel because of the presence of the graphene sheets. Furthermore, the supramolecular hybrid hydrogel transformed into a sol upon increase in temperature. All these features made our supramolecular hybrid hydrogel a nice candidate in a drug delivery and controlled release system.
Okapi at TREC-7: Automatic Ad Hoc, Filtering, VLC and Interactive. (1998)

Three runs were submitted: medium (title and description), short (title only) and a run which was a combination of a long run (title, description and narrative) with the medium and short runs. The average precision of the last mentioned run was higher by several percent than any other submitted run, but another participant recently noticed an impossibly high score for one topic in the short run. This led to the discovery that due to a mistake in the indexing procedures part of the SUBJECT eld of the LA Times documents had been indexed. Use of this eld was explicitly forbidden in the guidelines [1] for the ad hoc track. The o cial runs were repeated against a corrected index, and the corrected results are reported below, average precisions being reduced by about 2{4%.
Quantum cryptography: Public key distribution and coin tossing (2020)

When elementary quantum systems, such as polarized photons, are used to transmit digital information, the uncertainty principle gives rise to novel cryptographic phenomena unachievable with traditional transmission media, e.g. a communications channel on which it is impossible in principle to eavesdrop without a high probability of disturbing the transmission in such a way as to be detected. Such a quantum channel can be used in conjunction with ordinary insecure classical channels to distribute random key information between two users with the assurance that it remains unknown to anyone else, even when the users share no secret information initially. We also present a protocol for coin-tossing by exchange of quantum messages, which is secure against traditional kinds of cheating, even by an opponent with unlimited computing power, but ironically can be subverted by use of a still subtler quantum phenomenon, the Einstein-Podolsky-Rosen paradox.
Electrochemical Study of Dopamine at Electrode Fabricated by Cellulose-Assisted Aqueous Dispersion of Long-Length Carbon Nanotube (2016)

A long-length (hundred micrometers) carbon nanotube is successfully dispersed in aqueous solution with surfactant cellulose while maintaining its length. An electrochemical study of the synthetic pathway of dopamine (DA), dopamine-o-quinone (DAQ), leucodopaminechrome (LDAC), and dopaminechrome (DAC) at the electrode fabricated by the long-length carbon nanotube dispersed solution is presented. The sequence DA ⇌ DAQ ⇀ LDAC ⇌ DAC for the reaction is electron transfer-chemical reaction-electron transfer (ECE)-type, which is a chemical reaction (DAQ ⇀ LDAC, C) interposed between two electron transfer reactions (DA ⇌ DAQ and LDAC ⇌ DAC, E). The salient electrochemical signals due to both DA ⇌ DAQ and LDAC ⇌ DAC can be obtained at the long-length carbon nanotube electrode, unlike other carbon electrodes such as carbon paste, graphene, fullerene, nanofiber, and graphite. The overall reaction is dominated by step DAQ ⇀ LDAC and is sensitive to pH. With cyclic voltammetry in acidic media, the peak current due to LDAC ⇀ DAC disappeared at a higher scan rate because the reaction rate for DAQ ⇀ LDAC was so slow that DAQ was completely consumed in the electron transfer of DAQ ⇀ DA before the chemical reaction of DAQ ⇀ LDAC could go forward. In alkaline media, the peak height due to DAC ⇀ LDAC became as high as that due to DA ⇀ DAQ because the DAQ ⇀ LDAC rate became fast enough that a sufficient amount of LDAC was generated for the subsequent reaction of LDAC ⇀ DAC. Concomitantly, the reaction DAQ + LDAC ⇌ DA + DAC was generated. Quantitative and selective detection of dopamine based on the signal due to LDAC ⇀ DAC is possible just as in the conventional strategy of direct oxidation of dopamine (DA ⇀ DAQ).
Trust in a cryptographic economy and digital security deposits : protocols and policies (1996)

Thesis (M.S.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 1996.
Dinucleotide repeat polymorphism at the D11S35 locus (1990)

Full length cDNA coding for human lysosomal glucosidase alpha gene was cloned in the eukaryotic expression vector pSG5 (1). The 3.6 kb EcoRI insert was used as a probe. Polymorphism: In HindHI/EcoRI digested DNA the probe recognises a three-allele polymorphism with fragments of 5.2 (Al), 4.6 (A2), or 3.1 and 1.5 kb (A3). Constant fragments are 12 and 9 kb (see figure). Frequency: In 17 unrelated Caucasians and 24 Asians: Caucasians Asians Al -0.29 A2 0.87 0.63 A3 0.13 0.08 Not Polymorphic For: PvuH, TaqI, RsaI, BclI, BamHI when tested in 18 individuals. Chromosomal
Instruction issue logic for high-performance, interruptible, multiple functional unit, pipelined computers (1990)

The problems of data dependency resolution and precise interrupt implementation in pipelined processors are combined. A design for a hardware mechanism that resolves dependencies dynamically and, at the same time, guarantees precise interrupts is presented. Simulation studies show that by resolving dependencies the proposed mechanism is able to obtain a significant speedup over a simple instruction issue mechanism as well as implement precise interrupts.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">&gt;</ETX>
Requirement of MADS Domain Transcription Factor D-MEF2 for Muscle Formation in Drosophila (1995)

Members of the myocyte enhancer binding factor-2 (MEF2) family of MADS (MCM1, agamous, deficiens, and serum response factor) box transcription factors are expressed in the skeletal, cardiac, and smooth muscle lineages of vertebrate and Drosophila embryos. These factors bind an adenine-thymidine-rich DNA sequence associated with muscle-specific genes. The function of MEF2 was determined by generating a loss-of-function of the single mef2 gene in Drosophila (D-mef2). In loss-of-function embryos, somatic, cardiac, and visceral muscle cells did not differentiate, but myoblasts were normally specified and positioned. These results demonstrate that different muscle cell types share a common myogenic differentiation program controlled by MEF2.
Effect of Platelet-Rich Plasma on the Peri-implant Bone Response: (2004)

Platelet-rich plasma (PRP) is used as a source of growth factors to stimulate and accelerate bone formation and soft tissue healing. The use of PRP in bone regeneration, both around dental implants and in periodontic treatments, has become particularly appealing. The aim of this study was to evaluate the effect of PRP in an experimental model of osteogenesis around laminar implants. Fifteen male Wistar rats, weighing 90 +/- 10 g, were used in this study. One milliliter of blood was obtained from each animal by intracardiac puncture and transferred into Eppendorf tubes containing 10% sodium citrate. The tubes were centrifuged at 1500 rpm for 15 minutes and PRP was prepared. The laminar test was used to evaluate the bone peri-implant response. PRP and a titanium laminar implant were introduced into the right tibia (Ti/PRP group), whereas the left tibia (control) received only a laminar implant (Ti group). Thirty days postimplantation, the tibiae were resected, radiographed, and processed for embedding in acrylic resin. Ground sections (50 microm) were stained with toluidine blue. The peri-implant bone volume was evaluated histomorphometrically. Statistical analysis of the data was performed. The amount of newly formed bone in the Ti/PRP group (30 +/- 7 cm) was significantly greater than in the Ti group (16 +/- 3 cm). A greater volume of peri-implant bone was observed when PRP was used in the laminar implant test model.
Synthesis of a cephalosporin analogue (1977)

The recently developed photolytic Wolff rearrangement of 3-diazopyrrolidine-2,4-diones for the synthesis of β-lactams has been used to prepare cis(6H,7H)-8-oxo-7-phenylacetamido-1-aza-4-thiabicyclo[4.2.0]oct-2-ene-2-carbaldehyde (3; R = CHO), which showed antibacterial activity against Staphylococcus aureus.
Functional maturation of human naive T helper cells in the absence of accessory cells. Generation of IL-4-producing T helper cells does not require exogenous IL-4. (1995)

Abstract In the human model, requirements for the primary onset of IFN-gamma and IL-4 production in maturing T helper lymphocytes were compared. Stimulation of freshly isolated CD4+CD45RA+ naive Th cells with immobilized CD3 mAb in the presence of exogenous IL-2 resulted in the proliferative response of this subset, which was equal to or higher than CD4+CD45R0+ memory Th cells. Throughout the first 6 days after this mode of stimulation, naive Th cells did not secrete IL-4 and produced only small amounts of IFN-gamma, whereas high amounts of both lymphokines were secreted by stimulated autologous memory Th cells. Under these conditions, naive Th cells acquired the CD45RA-CD45R0+ memory phenotype. After restimulation, such in vitro-generated CD45R0+ cells produced high amounts of IFN-gamma but, despite the full phenotype conversion, they produced only trace amounts of IL-4. In contrast, when the primary stimulation and the expansion of cells proceeded in the presence of IL-1 beta or CD28 mAb, both IFN-gamma and IL-4 were produced after restimulation, in similar amounts compared with those produced by memory Th cells. The effect of IL-1 beta and CD28 signaling could not be obtained by the administration of exogenous IL-4 nor could the onset of IL-4 production be prevented by the presence of a neutralizing anti-IL-4 Ab in primary cultures. These data show that the development of human IL-4-producing Th cells can proceed in the absence of any pre-existing source of IL-4 and can be driven solely by the APC-related signals.
Immunological aspects of psoriasis. (1978)

A three-dimensional dynamic gadolinium-enhanced carotid artery imaging protocol with 10 sec per phase was evaluated with respect to the acquisition of an arterial-only phase after contrast bolus injection. Subsequently, the eigenimage filter was used to suppress any venous signal based on a difference in arterial and venous temporal enhancement patterns. From 63 consecutive scans of the carotid bifurcation, venous enhancement in the maximal arterial phase was found to be absent in 43%, weak in 19%, and strong in 38% of cases. Our eigenimage filter successfully suppressed the low signal veins in 100% and the high signal veins in 67% of cases. The number of acquired high-quality arterial-only images increased from 43% without to 87% with the use of the filter. In conclusion, even when a dynamic scan cannot resolve the short physiological delay between arterial and venous enhancement, the eigenimage filter can effectively be used to suppress the veins.
Synthesis and enantioselectivity of the enantiomers of PG9 and SM21, new potent analgesic and cognition‐enhancing drugs (1996)

The enantiomers of two α-tropanyl esters, SM21 (1) and PG9 (2), derived from (+)-R-hyoscyamine, that act by increasing the central cholinergic tone, were obtained by esterification after resolution of the corresponding racemic acids [(−)-S-1, (−)-R-2 and (+)-S-2] and by stereospecific synthesis [(+)-R-1]. Their analgesic and cognition-enhancing activities were tested in mice and their ACh-releasing properties determined on rat parietal cortex. These compounds show enantioselectivity in analgesic and cognition-enhancing tests on mice, the eutomers being the isomers which possess the same spatial arrangement of the groups on the chiral atom as (+)-R hyoscyamine [(+)-R-SM21, (+)-S-PG9]. The ACh-releasing effect of the enantiomers of SM21 in rats is in agreement with the results in mice, while PG9 enantiomers do not show any appreciable enantioselectivity in this test. On the basis of the different effects of the 5-HT4 antagonist SDZ 205557 on analgesia induced by the enantiomers of 1 and 2 and by (+)-R-hyoscyamine and the α-tropanyl ester of 2-phenylpropionic acid 3, a mechanism of action is proposed for this class of compounds. © 1996 Wiley-Liss, Inc.
Immunoreceptor tyrosine-based activation motif (ITAM), a unique module linking antigen and Fc receptors to their signaling cascades (1997)

Signal transduction by the T cell and B cell antigen receptors and by receptors for a variety of immunoglobulins' Fc region is strictly dependent on a receptor subunit cytoplasmic module termed immunoreceptor tyrosine-based activation motif (ITAM). This module exists in one or more copies in each of the receptor-associated signal-transducing molecules and it possesses two repeats of the consensus sequence Tyr-X-X-Leu/Ile spaced by six to eight amino acids. Receptor engagement is followed by a rapid and transient phosphorylation of tyrosine residues within their ITAMs, thereby creating temporary binding sites for Src homology 2 (SH2)-containing signaling molecules operating downstream of the activated receptor. The purpose of this review is to discuss recent findings on the functional role of ITAMs in antigen and Fc receptor-mediated signal transduction, with a particular emphasis on kinases operating upstream and downstream of the ITAMs.
Relative efficacy of intravenous immunoglobulin G in ameliorating thrombocytopenia induced by antiplatelet GPIIbIIIa versus GPIbα antibodies (2006)

Intravenous immunoglobulin G (IVIG) is used to treat idiopathic thrombocytopenic purpura (ITP). Although many patients benefit from IVIG, some are refractory to this therapy. ITP is characterized by platelet clearance mediated primarily by antiplatelet antibodies against GPIIbIIIa and/or the GPIbalpha complex. These 2 groups of antibodies may induce ITP through different mechanisms. We tested the hypothesis that IVIG may not be equally effective in preventing ITP caused by anti-GPIIbIIIa versus anti-GPIbalpha antibodies in mice. Thrombocytopenia was induced in BALB/c mice using monoclonal antibodies against either mouse GPIIbIIIa (JON1, JON2, and JON3) or GPIbalpha (p0p3, p0p4, p0p5, p0p9, and p0p11). Pretreatment with IVIG significantly ameliorated ITP in all anti-GPIIbIIIa-injected animals. Conversely, IVIG failed to prevent ITP in all anti-GPIbalpha-treated mice, except for p0p4. These results were repeated in C57BL/6 mice, and with different IVIG preparations. These data in mice suggest that patients with ITP mediated by anti-GPIbalpha antibodies may be less responsive to IVIG treatment.
Extended long-term culture reveals a highly quiescent and primitive human hematopoietic progenitor population (1996)

Long-term culture-initiating cells (LTC-IC) are hematopoietic progenitors able to generate colony-forming unit-cells (CFU) after 5 to 8 weeks (35 to 60 days) of culture on bone marrow (BM) stroma and represent the most primitive progenitors currently detectable in vitro. We have recently reported that long-term cultures initiated with CD34+CD38- cells from BM or cord blood are able to continue generating CFU for at least 100 days, ie, beyond the standard LTC-IC period. In this report, single-cell cultures from cord blood and retroviral marking of cord blood and BM were used to study whether the subpopulation of CD34+CD38- cells able to generate CFU beyond 60 days ("extended long-term culture-initiating cells" or ELTC-IC) are functionally distinct from LTC-IC in terms of timing of initial clonal proliferation and generative capacity. All cord blood LTC-IC formed clones of greater than 50 cells by day 30. In contrast, cord blood ELTC-IC proliferated later in culture, 50% forming clones after day 30. Although efficient retroviral marking of LTC-IC was seen (25% to 45%), marking of ELTC-IC was inefficient (< 1%), consistent with a more quiescent progenitor population. There was a positive correlation between time of clonal proliferation and generative capacity. ELTC-IC generated threefold to fourfold more progeny than did LTC-IC (P < .002). These studies show that there is a functional hierarchy of progenitors in long-term culture which correlates with their level of quiescence. By extending the LTC-IC assay, a more primitive progenitor may be studied that may be functionally closer to the human long-term repopulation stem cell in vivo.
Detection of a Human Intracisternal A-Type Retroviral Particle Antigenically Related to HIV (1990)

Sjögren's syndrome is an autoimmune disease that is characterized by dryness of the mouth and eyes. The loss of salivary and lacrimal gland function is accompanied by lymphocytic infiltration. Because similar symptoms and glandular pathology are observed in certain persons infected with human immunodeficiency virus (HIV), a search was initiated for a possible retroviral etiology in this syndrome. A human intracisternal A-type retroviral particle that is antigenically related to HIV was detected in lymphoblastoid cells exposed to homogenates of salivary tissue from patients with Sjögren's syndrome. Comparison of this retroviral particle to HIV indicates that they are distinguishable by several ultrastructural, physical, and enzymatic criteria.
Treatment with Amprenavir Alone or Amprenavir with Zidovudine and Lamivudine in Adults with Human Immunodeficiency Virus Infection (1999)

Amprenavir is a human immunodeficiency virus (HIV) protease inhibitor with a favorable pharmacokinetic profile and good in vitro activity. Ninety-two lamivudine- and protease inhibitor-naive individuals with >/=50 CD4 cells/mm3 and >/=5000 HIV RNA copies/mL were assigned amprenavir (1200 mg) alone or with zidovudine (300 mg) plus lamivudine (150 mg), all given every 12 h. After a median follow-up of 88 days, the findings of a planned interim review resulted in termination of the amprenavir monotherapy arm. Among 85 subjects with confirmed plasma HIV RNA determination, 15 of 42 monotherapy versus 1 of 43 triple-therapy subjects had an HIV RNA increase above baseline or 1 log10 above nadir (P=.0001). For subjects taking triple therapy at 24 weeks, the median decrease in HIV RNA was 2.04 log10 copies/mL, and 17 (63%) of 27 evaluable subjects had <500 HIV RNA copies/mL. Treatment with amprenavir, zidovudine, and lamivudine together reduced the levels of HIV RNA significantly more than did amprenavir monotherapy.
Artificial three-dimensional niches deconstruct pancreas development in vitro (2013)

In the context of a cellular therapy for diabetes, methods for pancreatic progenitor expansion and subsequent differentiation into insulin-producing beta cells would be extremely valuable. Here we establish three-dimensional culture conditions in Matrigel that enable the efficient expansion of dissociated mouse embryonic pancreatic progenitors. By manipulating the medium composition we generate either hollow spheres, which are mainly composed of pancreatic progenitors, or complex organoids that spontaneously undergo pancreatic morphogenesis and differentiation. The in vitro maintenance and expansion of pancreatic progenitors require active Notch and FGF signaling, thus recapitulating in vivo niche signaling interactions. Our experiments reveal new aspects of pancreas development, such as a community effect by which small groups of cells better maintain progenitor properties and expand more efficiently than isolated cells, as well as the requirement for three-dimensionality. Finally, growth conditions in chemically defined biomaterials pave the way for testing the biophysical and biochemical properties of the niche that sustains pancreatic progenitors.
Dynamic and specific immune responses against multiple tumor antigens were elicited in patients with hepatocellular carcinoma after cell-based immunotherapy (2017)

Our study demonstrates that MASCT is well-tolerated by patients with HCC and elicits strong and dynamic immune responses specifically against multiple tumor associated antigens, which may correlate with clinical outcomes.
Design of Oligonucleotide Arrays at Interfaces (1999)

The surface attachment and detection of DNA probes are essential in the design of nucleic acid-based biosensors. A new strategy for the covalent immobilization of single-stranded oligonucleotides on gold-covered planar supports is presented. Optimization of the surface density in the resulting DNA arrays permits a high hybridization efficiency to be achieved. Surface plasmon resonance and, for the first time, ATR-FTIR spectroscopy are used to follow in situ the oligonucleotide layer formation and the subsequent complementary strand hybridization. Such well-defined, covalently immobilized oligonucleotide arrays can find application in the development of novel DNA-based sensors for mutation detection and gene mapping as well as in studies of nucleic acid−ligand interactions.
Angiotensinogen gene-inducible enhancer-binding protein 1, a member of a new family of large nuclear proteins that recognize nuclear factor kappa B-binding sites through a zinc finger motif. (1991)

Transcriptional activation of the rat angiotensinogen gene during the acute-phase response is dependent on a previously characterized acute-phase response element (APRE) that binds at least two types of nuclear proteins: a cytokine-inducible activity indistinguishable from nuclear factor kappa-B (NF kappa B) and a family of C/EBP-like proteins. We screened a rat liver cDNA expression library with a labeled APRE DNA probe and isolated a single clone that encodes a sequence-specific APRE-binding protein. This new protein, the angiotensinogen gene-inducible enhancer-binding protein 1 (AGIE-BP1), is encoded by a large continuous open reading frame and contains a zinc finger motif virtually identical to the DNA-binding domain of a recently described human protein, MBP-1/PRDII-BF1, and a homologous mouse protein, alpha A-CRYBP1. Outside the binding domain, the sequences diverged considerably. Southern blot analysis indicated that AGIE-BP1 and alpha A-CRYBP1 are encoded by separate genes, thus defining a new family of DNA-binding proteins. Electrophoretic mobility shift assays, methylation interference, and DNase I footprint protection assays with the bacterially expressed DNA-binding domain of AGIE-BP1 demonstrated a binding specificity indistinguishable from that of purified NF kappa B. Antiserum raised against the bacterially expressed DNA-binding domain of AGIE-BP1 detected on immunoblots of cellular proteins a large (greater than 250-kDa) nuclear protein. Northern (RNA) blot analysis of RNAs from different rat tissues and cell lines indicated different levels of expression of the large (greater than 10-kb) AGIE-BP1 transcript in different tissues. The potential role of AGIE-BP1 in the regulation of gene expression is discussed.