gebhart/patrepeval huggingface dataset:
Engineering cartilage‐like tissue using human mesenchymal stem cells and silk protein scaffolds (2004)

Human mesenchymal stem cells (hMSC) derived from bone marrow aspirates can form the basis for the in vitro cultivation of autologous tissue grafts and help alleviate the problems of immunorejection and disease transmission associated with the use of allografts. We explored the utility of hMSC cultured on protein scaffolds for tissue engineering of cartilage. hMSC were isolated, expanded in culture, characterized with respect to the expression of surface markers and ability for chondrogenic and osteogenic differentiation, and seeded on scaffolds. Four different scaffolds were tested, formed as a highly porous sponge made of: 1) collagen, 2) cross-linked collagen, 3) silk, and 4) RGD-coupled silk. Cell-seeded scaffolds were cultured for up to 4 weeks in either control medium (DMEM supplemented with 10% fetal bovine serum) or chondrogenic medium (control medium supplemented with chondrogenic factors). hMSC attachment, proliferation, and metabolic activity were markedly better on slowly degrading silk than on fast-degrading collagen scaffolds. In chondrogenic medium, hMSC formed cartilaginous tissues on all scaffolds, but the extent of chondrogenesis was substantially higher for hMSC cultured on silk as compared to collagen scaffolds. The deposition of glycosaminoglycan (GAG) and type II collagen and the expression of type II collagen mRNA were all higher for hMSC cultured on silk than on collagen scaffolds. Taken together, these results suggest that silk scaffolds are particularly suitable for tissue engineering of cartilage starting from hMSC, presumably due to their high porosity, slow biodegradation, and structural integrity.
Gallium nitride materials - progress, status, and potential roadblocks (2002)

Metal-organic vapor phase epitaxy (MOVPE) and molecular beam epitaxy (MBE) are the principal techniques for the growth and n-type (Si) and p-type (Mg) doping of III-nitride thin films on sapphire and silicon carbide substrates as well as previously grown GaN films. Lateral and pendeoepitaxy via MOVPE reduce significantly the dislocation density and residual strain in GaN and AlGaN films. However tilt and coalescence boundaries are produced in the laterally growing material. Very high electron mobilities in the nitrides have been realized in radio-frequency plasma-assisted MBE GaN films and in two-dimensional electron gases in the AlGaN/GaN system grown on MOVPE-derived GaN substrates at the crossover from the intermediate growth regime to the droplet regime. State-of-the-art Mg doping profiles and transport properties have been achieved in MBE-derived p-type GaN. The Mg-memory effect, and heterogeneous growth, substrate uniformity, and flux control are significant challenges for MOVPE and MBE, respectively. Photoluminescence (PL) of MOVPE-derived unintentionally doped (UID) heteroepitaxial GaN films show sharp lines near 3.478 eV due to recombination processes associated with the annihilation of free-excitons (FEs) and excitons bound to a neutral shallow donor (D/spl deg/X).
Second order derivatives for network pruning: Optimal Brain Surgeon (1992)

We investigate the use of information from all second order derivatives of the error function to perform network pruning (i.e., removing unimportant weights from a trained network) in order to improve generalization and increase the speed of further training.
Infrared spectroscopy and magnesium content of bone mineral in osteoporotic women. (1981)

Larger and more perfect crystals in bone mineral from osteoporotic women have been described using biophysical methods. In search of the cause of this change, both chemical analysis and infrared spectrophotometry were used on iliac crest bone biopsies from 19 postmenopausal osteoporotic women. These women had each had a vertebral crush fracture and had a urinary hydroxyproline: creatinine ratio greater than 0.012. Lower than normal trabecular bone magnesium content and larger and more perfect crystals in trabecular bone mineral identified on infrared spectrophotometry were found in 16 out of the 19 women. Magnesium deficiency was confirmed by Thoren's magnesium load test in this subgroup of 16. Higher than normal bone magnesium content and smaller and less perfect crystals in bone mineral were found in five postmenopausal uremic women tested.
Cloned human neuropeptide Y receptor couples to two different second messenger systems. (1992)

Neuropeptide Y (NPY) is one of the most abundant neuropeptides in the mammalian nervous system and exhibits a diverse range of important physiological activities, including effects on psychomotor activity, food intake, regulation of central endocrine secretion, and potent vasoactive effects on the cardiovascular system. Two major subtypes of NPY receptor (Y1 and Y2) have been defined by pharmacological criteria. We report here the molecular cloning of a cDNA sequence encoding a human NPY receptor and the corrected sequence for a rat homologue. Analysis of this sequence confirms that the receptor is a member of the G protein-coupled receptor superfamily. When expressed in Chinese hamster ovary (CHO) or human embryonic kidney (293) cells, the receptor exhibits the characteristic ligand specificity of a Y1 type of NPY receptor. In the 293 cell line, the receptor is coupled to a pertussis toxin-sensitive G protein that mediates the inhibition of cyclic AMP accumulation. In the CHO cell line, the receptor is coupled not to the inhibition of adenylate cyclase but rather to the elevation of intracellular calcium. These results demonstrate that second messenger coupling of the NPY-Y1 receptor is cell type specific, depending on the specific repertoire of G proteins and effector systems present in any cell type.
High-speed low-power adder with a new logic style: pseudo dynamic logic (SDL) (2001)

In this paper, a high speed and low power adder is designed using a new logic-design style called Pseudo Dynamic Logic (SDL). Traditional dynamic logic is pre-charged to a default value and in the evaluation phase is changed to its real logic, However, in this new logic style, the internal nodes are charged to an intermediate pre-charge value, so that the evaluation is performed faster. A 32-bit CLA adder has been designed and simulated using HSPICE Level 49 parameters of a 0.6 /spl mu/m CMOS process. Simulated measurements on this adder show that the worst-case delay is 1.56 ns. This shows 2.1 times speed improvement and 21.2% area saving in comparison to a domino dynamic logic design implemented with the same technology.
Comparison of control techniques for robust performance on uncertain structural systems (1994)

Thesis (M.S.)--Massachusetts Institute of Technology, Dept. of Aeronautics and Astronautics, 1994.
Pharmacokinetic and Pharmacodynamic Data Analysis (2007)

Pharmacokinetic and pharmacodynamic data analysis , Pharmacokinetic and pharmacodynamic data analysis , کتابخانه دیجیتال جندی شاپور اهواز
Using Secure Coprocessors (1994)

How do we build distributed systems that are secure? Cryptographic techniques can be used to secure the communications between physically separated systems, but this is not enough: we must be able to guarantee the privacy of the cryptographic keys and the integrity of the cryptographic functions, in addition to the integrity of the security kernel and access control databases we have on the machines. Physical security is a central assumption upon which secure distributed systems are built; without this foundation even the best cryptosystem or the most secure kernel will crumble. In this thesis, I address the distributed security problem by proposing the addition of a small, physically secure hardware module, a secure coprocessor, to standard workstations and PCs. My central axiom is that secure coprocessors are able to maintain the privacy of the data they process. This thesis attacks the distributed security problem from multiple sides. First, I analyze the security properties of existing system components, both at the hardware and software level. Second, I demonstrate how physical security requirements may be isolated to the secure coprocessor, and showed how security properties may be bootstrapped using cryptographic techniques from this central nucleus of security within a combined hardware/software architecture.
Discrete-variational-X.alpha. electronic structure studies of the spherical C60 cluster: prediction of ionization potential and electronic transition energy (1986)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTDiscrete-variational-X.alpha. electronic structure studies of the spherical C60 cluster: prediction of ionization potential and electronic transition energyPaul D. HaleCite this: J. Am. Chem. Soc. 1986, 108, 19, 6087–6088Publication Date (Print):September 1, 1986Publication History Published online1 May 2002Published inissue 1 September 1986https://pubs.acs.org/doi/10.1021/ja00279a094https://doi.org/10.1021/ja00279a094research-articleACS PublicationsRequest reuse permissionsArticle Views211Altmetric-Citations84LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts
Mechanisms of Acquired Resistance to Epidermal Growth Factor Receptor Tyrosine Kinase Inhibitors in Non–Small Cell Lung Cancer (2008)

Epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors gefitinib and erlotinib are effective therapies for non-small cell lung cancer patients whose tumors harbor somatic mutations in EGFR. All patients, however, ultimately develop resistance to these agents. Thus, there is a great need to understand how patients become resistant to develop effective therapies for these cancers. Studies over the last few years have identified two different EGFR tyrosine kinase inhibitor resistance mechanisms, a secondary mutation in EGFR, EGFR 790M, and amplification of the MET oncogene. These findings have led to clinical trials using newly designed targeted therapies that can overcome these resistance mechanisms and have shown promise in laboratory studies. Ongoing research efforts will likely continue to identify additional resistance mechanisms, and these findings will hopefully translate into effective therapies for non-small cell lung cancer patients.
Growth factor-like activity of gliadin, an alimentary protein: implications for coeliac disease (2006)

The ability of gliadin peptides to delay EGFR inactivation through interference with the endocytic pathway suggests a model where gliadin fragments amplify the effects of trace amounts of EGF, and possibly of other growth factors, by prolonging receptor activation. The results, using cultures of coeliac intestinal biopsies, highlight the role of the EGF pathway in establishing and maintaining the typical atrophic and proliferative alterations of the small intestine in CD.
Detecting and Tracking Political Abuse in Social Media (2021)

We study astroturf political campaigns on microblogging platforms: politically-motivated individuals and organizations that use multiple centrally-controlled accounts to create the appearance of widespread support for a candidate or opinion. We describe a machine learning framework that combines topological, content-based and crowdsourced features of information diffusion networks on Twitter to detect the early stages of viral spreading of political misinformation. We present promising preliminary results with better than 96% accuracy in the detection of astroturf content in the run-up to the 2010 U.S. midterm elections.
Identification of mutant monoclonal antibodies with increased antigen binding. (1988)

Sib selection and an ELISA have been used to isolate hybridoma subclones producing mutant antibodies that bind antigen better than the parental monoclonal antibody. Such mutants arise spontaneously in culture at frequencies of 2.5-5 X 10(-5). The sequences of the heavy and light chain variable regions of the mutant antibodies are identical to that of the parent and the Ka values of the mutants and the parent are the same. The increase in binding is associated with abnormalities of the constant region polypeptide and probably reflect changes in avidity of these antibodies.
Effect of soybean phytoestrogen intake on low density lipoprotein oxidation resistance (1998)

The oxidation of low density lipoproteins (LDLs) is thought to take place in the arterial intima when the particles have become isolated from circulating water-soluble antioxidants. We hypothesized that isoflavonoid antioxidants derived from soy could be incorporated into lipoproteins and possibly could protect them against oxidation, which is regarded as atherogenic. Six healthy volunteers received 3 soy bars [containing the isoflavonoid antioxidants genistein (12 mg) and daidzein (7 mg)] daily for 2 weeks. LDLs were isolated from blood drawn at the the end of a 2-week dietary baseline period, after 2 weeks on soy, and after discontinuation of soy. Large increases in plasma isoflavonoid levels occurred during soy feeding, but only minute amounts were stably associated with lipoproteins (less than 1% of plasma isoflavonoids in the LDL fraction). The LDLs were subjected to copper-mediated oxidation in vitro. Compared with off soy values, lag phases of LDL oxidation curves were prolonged by a mean of 20 min (P < 0.02) during soy intake, indicating a reduced susceptibility to oxidation. The results suggest that intake of soy-derived antioxidants, such as genistein and daidzein, may provide protection against oxidative modification of LDL. As only very small amounts of these substances were detected in purified LDL, modified LDL particles may have been produced in vivo by circulating isoflavonoids promoting resistance to oxidation ex vivo.
Heme Oxygenase Activity Modulates Vascular Endothelial Growth Factor Synthesis in Vascular Smooth Muscle Cells (2002)

Hypoxia, cytokines, and nitric oxide (NO) stimulate the generation of vascular endothelial growth factor (VEGF) and induce heme oxygenase-1 (HO-1) expression in vascular tissue. HO-1 degrades heme to carbon monoxide (CO), iron, and biliverdin, the latter being reduced to bilirubin by biliverdin reductase. In the present study, we investigated the role of HO-1 in the modulation of VEGF synthesis in rat vascular smooth muscle cells (VSMC). In VSMC stimulated with cytokines, inhibition of NO production significantly, but not completely, reduced VEGF release. In contrast, inhibition of HO activity by tin protoporphyrin IX (SnPPIX) totally prevented cytokine-induced increase in VEGF, despite an augmented synthesis of intracellular NO. Stimulation of HO-1 activity by hemin enhanced VEGF production; this effect was abrogated by blockade of the HO pathway. Similarly, VEGF synthesis induced by hypoxia was down-regulated by SnPPIX, but not by inhibitors of NO synthase. To elucidate further a direct involvement of HO-1 in the observed effects, we generated transfected cells that overexpressed the HO-1 gene. Notably, these cells synthesized significantly more VEGF protein than cells transfected with a control gene. Among the products of HO-1, biliverdin and bilirubin showed no effect, whereas iron ions inhibited VEGF synthesis. Exposure of cells to 1% CO resulted in a marked accumulation of VEGF (20-fold increase) over the basal level. Our data indicate that HO-1 activity influences the generation of VEGF in VSMC in both normoxic and hypoxic conditions. As CO and iron, respectively the inducer and the inhibitor of VEGF synthesis, are concomitantly produced during the degradation of heme, these data indicate that HO by-products may differentially modulate VEGF production.
ChemInform Abstract: Hydrosilylation of Carbon—Carbon Double Bonds (2000)

Abstract ChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 100 leading journals. To access a ChemInform Abstract of an article which was published elsewhere, please select a “Full Text” option. The original article is trackable via the “References” option.
Internal combustion engine fundamentals (1988)

1 Engine Types and Their Operations 2 Engine Design and Operating Parameters 3 Thermochemistry of Fuel-Air Mixtures 4 Properties of Working Fluids 5 Ideal Models of Engine Cycles 6 Gas Exchange Processes 7 SI Engine Fuel Metering and Manifold Phenomena 8 Charge Motion within the Cylinder 9 Combustion in Ignition Engines 10 Combustion in Compression Ignition Engines 11 Pollutant Formation and Control 12 Engine Heat Transfer 13 Engine Friction and Lubrication 14 Modeling Real Engine Flow and Combustion Processes 15 Engine Operating Characteristics Appendixes
A conditional suicide system in Escherichia coli based on the intracellular degradation of DNA (1994)

The potential risks associated with the intentional or unintentional release of genetically engineered microorganisms led to the construction of biological containment systems by which bacteria are killed in a controlled suicide process. In previously published suicide systems, cell killing was caused by proteins destroying the cell membrane or cell wall. Here a conditional cell killing system based on the intracellular degradation of cellular DNA is presented. The nuclease gene used was that of the extracellular nuclease of Serratia marcescens. The nuclease gene was deleted for the leader-coding sequence, and the truncated gene was put under the control of the lambda pL promoter. Following thermoinduction of the nuclease gene cassette in Escherichia coli, cell survival dropped to 2 x 10(-5), and more than 80% of the radioactively labeled DNA was converted to acid-soluble material within 2.5 h in the absence of cell lysis. The majority (84%) of clones which survived thermoinduced killing turned out to be as sensitive to a second thermoinduction as the original strain. The other clones showed somewhat slower killing kinetics or slightly higher final levels of survivors. The suicide system described combines the regulated killing of cells with the destruction of intracellular DNA otherwise potentially available for horizontal gene transfer processes.
Streptococcus suis infections in pigs in the Netherlands (Part I) (1985)

Data are presented on the incidence of various streptococcal infections in pigs in the Netherlands. 314 Strains isolated in the course of routine post-mortem diagnosis were examined. The most frequently occurring streptococcus was S. subacidus (bio) type II which was isolated in 31.2% of the cases. S. suis type 2 (Serogroup R) and S. equisimilis (Serogroup C) constituted 16.2% and 13.7% of the isolates respectively. Besides meningitis, endocarditis and polyserositis S. suis type 2 infections may frequently be associated with pneumonia (42%). The biochemical profiles of the various S. suis and S. subacidus (bio) types are presented. The profile of both species is almost identical. It seems justified to use the name S. suis for strains with this characteristic profile and to abandon the name S. subacidus. Haemolysis does not appear to be a suitable characteristic to screen for S. subacidus/S. suis types. In comparing three serological methods for typing S. suis type 2, gel precipitation using Fuller's extract and slide agglutination give an almost 100% correlation. These two methods are recommended for serotyping.
Antiviral activity of enzymatically oxidized caffeic acid against herpesvirus hominis type 1 and type 2. (1983)

The cytotoxicity and antiviral activity of the caffeic acid oxidation product (KOP), a higher molecular polyphenolic compound of strong antiviral activity against herpesvirus hominis type 1 and type 2 (HVH 1, HVH 2), were tested in 6 cell cultures: rabbit kidney primary cells (RKP), rabbit testis primary cells (RTP), primary human embryo lung fibroblasts (LF), calf testis primary cells (CTP), FL- and HEp-2 cells. A marked inhibitory effect on the multiplication of HVH 1 and 2 has been observed in all cell systems at non-cytotoxic concentrations of 0.1-20 micrograms/ml KOP. The adsorption of the virus to cell surface was the most KOP-sensitive phase of herpesvirus multiplication cycle.
Design of an Irreversible Electroporation System for Clinical Use (2007)

Irreversible electroporation is an ablation modality in which microseconds, high-voltage electrical pulses are applied to induce cell necrosis in a target tissue. To perform irreversible electroporation it is necessary to use a medical device specifically designed for this use. The design of an irreversible electroporation system is a complex task in which the effective delivery of high energy pulses and the safety of the patient and operator are equally important. Pulses of up to 3000 V of amplitude and 50 A of current need to be generated to irreversibly electroporate a target volume of approximately 50 to 70 cm3 with as many as six separate electrodes; therefore, a traditional approach based on high voltage amplifiers becomes hard to implement. In this paper, we present the process that led to the first irreversible electroporator capable of such performances approved for clinical use. The main design choices and its architecture are outlined. Safety issues are also explained along with the solutions adopted.
Metal−Organic Frameworks As Templates for Nanoscale NaAlH4 (2009)

Metal-organic frameworks (MOFs) offer an attractive alternative to traditional hard and soft templates for nanocluster synthesis because their ordered crystalline lattice provides a highly controlled and inherently understandable environment. We demonstrate that MOFs are stable hosts for metal hydrides proposed for hydrogen storage and their reactive precursors, providing platform to test recent theoretical predictions that some of these materials can be destabilized with respect to hydrogen desorption by reducing their critical dimension to the nanoscale. With the MOF HKUST-1 as template, we show that NaAlH(4) nanoclusters as small as eight formula units can be synthesized. The confinement of these clusters within the MOF pores dramatically accelerates the desorption kinetics, causing decomposition to occur at approximately 100 degrees C lower than bulk NaAlH(4). However, using simultaneous thermogravimetric modulated beam mass spectrometry, we also show that the thermal decomposition mechanism of NaAlH(4) is complex and may involve processes such as nucleation and growth in addition to the normally assumed two-step chemical decomposition reactions.
A fast algorithm for signal subspace decomposition and its performance analysis (1991)

A fast signal-subspace decomposition (FSD) algorithm is presented for sample covariance matrices, which only needs O(M/sup 2/d) flops, where d(<<M) denotes the signal subspace dimension. A theoretical performance analysis was conducted, and it shows the strong consistency of the estimation of d and the asymptotic equivalence between the FSD estimate and the one obtained from an eigendecomposition. The approach can be easily implemented in parallel to further reduce the computation time to as little as O(Md) or O(log Md) by using O(M) or O(M/sup 2/) multipliers, respectively.<<ETX>>