gebhart/patrepeval huggingface dataset:
Proline-Catalyzed Direct Asymmetric Aldol Reactions (2000)

ADVERTISEMENT RETURN TO ISSUEPREVCommunicationNEXTProline-Catalyzed Direct Asymmetric Aldol ReactionsBenjamin List, Richard A. Lerner, and Carlos F. BarbasView Author Information The Skaggs Institute for Chemical Biology and the Department of Molecular Biology The Scripps Research Institute 10550 North Torrey Pines Road, La Jolla, California 92037 Cite this: J. Am. Chem. Soc. 2000, 122, 10, 2395–2396Publication Date (Web):February 26, 2000Publication History Received7 December 1999Published online26 February 2000Published inissue 1 March 2000https://pubs.acs.org/doi/10.1021/ja994280yhttps://doi.org/10.1021/ja994280yrapid-communicationACS PublicationsCopyright © 2000 American Chemical SocietyRequest reuse permissionsArticle Views92128Altmetric-Citations2513LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose SUBJECTS:Aldol reactions,Catalysts,Ketones,Peptides and proteins,Stereoselectivity Get e-Alerts
Phospholipase activation triggers apoptosis in photosensitized mouse lymphoma cells. (1993)

Photodynamic therapy (PDT), an experimental cancer treatment employing a photosensitizer and visible light, is a highly efficient inducer of apoptosis (or programmed cell death) in mouse L5178Y lymphoma cells, resulting in extensive DNA fragmentation within 1-2 h. The major targets for PDT are in cellular membranes, and we now find that PDT sensitized by aluminum phthalocyanine causes the rapid (< 1 min) activation of phospholipase C and the breakdown of membrane phosphoinositides, as well as a similarly rapid release of Ca2+ from intracellular pools. A phospholipase C inhibitor, U73122, blocks the rapid transient increases in both inositol-1,4,5-trisphosphate and intracellular Ca2+ levels as well as the subsequent fragmentation of nuclear DNA, whereas the analogue U73343 is much less effective against all of the aforementioned responses. In addition, p-bromphenacyl bromide, an inhibitor of phospholipase A2, blocks DNA fragmentation, and PDT stimulates the release of arachidonic acid, probably by phospholipase A2-dependent breakdown of membrane phospholipids. Thus, photodynamic damage to cell membranes can mimic natural stimuli of phospholipases and initiate apoptosis in L5178Y cells.
STI571 (Glivec) inhibits the interaction between c‐KIT and heat shock protein 90 of the gastrointestinal stromal tumor cell line, GIST‐T1 (2005)

The gastrointestinal stromal tumor cell line, GIST-T1, has a heterogenic 57-base pair deletion in exon 11 of the c-kit mutation, and the c-KIT protein in the GIST-T1 cells constitutively activated. We report that STI571 (Glivec; Novartis, Basel, Switzerland), a specific inhibitor of c-KIT, inhibits the clustering of c-KIT at the cell membrane of the GIST-T1 cells. Furthermore, STI571 prevents the interaction between c-KIT and the molecular chaperone, heat shock protein 90 (Hsp90). Geldanamycin, an inhibitor of Hsp90, also prevents interaction between c-KIT and Hsp90, and inhibits tyrosine phosphorylation of c-KIT. Our results indicate that c-KIT molecules are assembled on the cell surface of the GIST-T1 cells, and that the interaction between c-KIT and Hsp90 plays an important role in c-KIT activation.
FOXO1 Functions as a Master Switch That Regulates Gene Expression Necessary for Tumor Necrosis Factor-induced Fibroblast Apoptosis (2005)

Tumor necrosis factor-alpha (TNF-alpha) is a potent pro-inflammatory and pro-apoptotic mediator that plays an important role in several normal and disease processes. TNF-induced cell death is one of the principal mechanisms by which cells are removed. Although TNF-mediated apoptosis has been the subject of intense investigation, the transcriptional mechanisms through which it promotes apoptosis are not well understood and, paradoxically, the archetypal TNF-induced nuclear factor NFkappaB is anti-apoptotic. To identify a potential master transcriptional regulator of apoptosis, we examined an array of TNF-alpha-activated transcription factors. Fork-head box class-O 1 (FOXO1) was strongly activated, which was confirmed in vitro and in vivo by electrophoretic mobility shift assay. The central importance of FOXO1 was established in experiments with small inhibitory RNA (siRNA) that specifically silenced FOXO1. When FOXO1 was silenced, fibroblast apoptosis was reduced 76%. Other siRNAs that partially inhibited FOXO1 expression were proportionately effective in reducing apoptosis. Transcriptional profiling was then carried out in conjunction with siRNA to establish mechanisms by which FOXO1 modulated apoptosis. In the absence of FOXO1, TNF-alpha failed to up-regulate a large number of pro-apoptotic gene families including ligands, receptors, adapter molecules, mitochondrial proteins, and caspases. siRNA silencing also blocked down-regulation of anti-apoptotic genes. These results indicate that TNF induces activation of the FOXO1 transcription factor, which acts as a master switch to control apoptosis.
Physical Properties of Ionic Liquids: Database and Evaluation (2006)

A comprehensive database on physical properties of ionic liquids (ILs), which was collected from 109 kinds of literature sources in the period from 1984 through 2004, has been presented. There are 1680 pieces of data on the physical properties for 588 available ILs, from which 276 kinds of cations and 55 kinds of anions were extracted. In terms of the collected database, the structure-property relationship was evaluated. The correlation of melting points of two most common systems, disubstituted imidazolium tetrafluoroborate and disubstituted imidazolium hexafluorophosphate, was carried out using a quantitative structure-property relationship method.
Isolation and Characterization of Expressible cDNA Clones Encoding the M1 and M2 Subunits of Mouse Ribonucleotide Reductase (1986)

Mammalian ribonucleotide reductase consists of two nonidentical subunits, proteins M1 and M2, which are differentially regulated during the cell cycle. We have isolated expressible cDNA clones of both subunits from an Okayama-Berg cDNA library made with mRNA from hydroxyurea-resistant, M2 protein-overproducing mouse TA3 cells. Expression of M2 protein could be demonstrated by electron paramagnetic resonance spectroscopy after transfection of COS-7 monkey cells with the plasmid. Electrophoresis and blot analyses of the parent and hydroxyurea-resistant TA3 mRNA revealed two M2 transcripts, a major one of 2.1 kilobases and a minor one of about 1.6 kilobases. Restriction endonuclease mapping of the corresponding cDNAs indicated that the two mRNAs differed only in the length of the 3' untranslated ends. By contrast, there was only one mRNA corresponding to the M1 protein, and its mobility corresponded to about 3.1 kilobases. The hydroxyurea-resistant TA3 cells contained a 50- to 100-fold excess of the M2 mRNAs over that of the parent cells and a 10-fold excess of the M1 mRNA. However, a Southern blot analysis of the corresponding genomic DNA sequences showed that the M2 gene was amplified fivefold but the M1 gene was still single copy. The complete nucleotide sequence of the 2,111-base-pair-long M2 cDNA revealed an open reading frame coding for 390 amino acids, which corresponds to a molecular weight of 45,100. The mouse M2 protein sequence was quite homologous to the equivalent protein in the clam Spisula solidissima, while the homology to the smaller subunits of Epstein-Barr virus, herpes simplex virus type 2, and Escherichia coli ribonucleotide reductases were less pronounced.
Facilitated Tendon‐Bone Healing by Local Delivery of Recombinant Hepatocyte Growth Factor in Rabbits (2009)

Application of HGF may be considered as a new therapeutic approach to accelerate healing and rehabilitation after ligament reconstruction.
Cancer chemotherapy and biotherapy : a reference guide (1994)

Part 1 General information and chemotherapeutic agents: preparation, administration, and safe disposal of chemotherapeutic agents chemotherapeutic agents used in the treatment of cancer biologic response modifiers cancer drug development chemoprevention of cancer. Part 2 Nursing management of the alterations associated with chemotherapy/biotherapy: hematopoietic alterations associated with chemotherapy and biotherapy gastrointestinal system alterations effects on reproduction/sexual function alterations in the integumentary system title to come chemotherapy-induced second malignancies other systems affected by chemotherapy and biotherapy. Part 3 Vascular access devices: central venous access devices peripherally inserted central catheters implantable ports ambulatory infusion devices management of complications associated with the use of venous access devices client education.
Identification of Nonlinear Passive Devices for Haptic Simulations (2005)

This paper describes a method for identifying models of a class of nonlinear passive devices, such as switches, knobs, and buttons. A general nonlinear impedance model is presented, which accounts for dynamics that change with both position and direction. Exponentially-weighted least-squares is used to fit the nonlinear model to experimental data from a specially designed physical 1-DOF test device with inherent nonlinearities. The data are obtained using an instrumented linear probe.
Some Evidence of a Dual Stereodifferentiation Mechanism in the Polymerization of Propene by α-Diimine Nickel Catalysts (2000)

Nickel diimine compounds of general formula [{(ArNC(X)C(X)NAr)}NiBr2] (X2 = 1,8-naphthdiyl; Ar = 2,6-diisopropylphenyl, 1; 2,6-dimethylphenyl, 2; 2-isopropyl-6-methylphenyl, 3; 2- tert-butyl-6-methylphenyl, 4; 2,4-di-tert-butyl-6-methylphenyl, 5) were synthesized and tested in the polymerization of propene to address the effects of the coordination environment at the nickel center on the polypropylene microstructure. Compounds 1 and 2, having four isopropyl and four methyl ortho substituents, respectively, afford prevailingly syndiotactic polypropylenes at −45 °C (rr = 75% for 1 and rr = 61% for 2) through a “chain-end” control mechanism. Compounds such as 3, 4, and 5, having two different ortho substituents on the same aromatic ring, can exist as either rac or meso isomers. Rac-3 and rac-4 afford much less stereoregular polypropylenes with respect to 1 and 2 (e.g., mm = 41% and rr = 25% for rac-3). These C2-symmetric catalysts could provide an “enantiomorphic-site” type isotactic-specific steric control opposing the syndiospecific “chain-end” steric control. The hypothesis of a dual mechanism of steric control being operative has been supported by the synthesis of both the rac and the meso isomers of 5, with the former still affording a polypropylene with a low stereoregularity (rr = 33% and mm = 23%) and the latter yielding a prevailingly syndiotactic polymer (rr = 66%).
High Serum Tryptase Value in Massive Acute Myocardial Infarction with Ventricular Arrhythmia Exortion in a Cocaine Abuser (2009)

A 38-year-old cocaine abuser was admitted to the Emergency Department with a one hour history of precordial chest pain associated with shortness of breath and extreme discomfort. On admission his blood pressure was 90/60 mmHg, the resting 12-lead ECG showed ventricular tachycardia at about 300 beats per minute, and oxygen saturation was 86 percent in room air. After electrical cardioversion, the 12-lead ECG revealed sinusal rhythm and a significative ST segment elevation in leads I, aVL and V1-V6, that was about 0.5 mV in leads I and aVL and more than 1 mV in leads V2, V3 and V4. Laboratory determinations showed elevated creatine-chinase MB (CK-MB) and troponin I. An emergency coronary angiogram was normal. Cocaine use is a major cause of acute myocardial infarction in patients with normal epicardial coronary arteries but the exact mechanism still remains unclear. We hypothesize a non-IgE mediated mast-cell activation, with a direct action played by cocaine, and consequent massive expression of several factors effecting the microcirculatory system, including pro-inflammatory cytokines and chemokines. Our hypothesis is supported by an elevated serum tryptase levels in the patient.
Ultrasonic treatment restores the photoelectric parameters of silicon solar cells degraded under the action of 60Co gamma radiation (2007)

The photoelectric parameters of silicon solar cells degraded under the action of 60Co gamma-radiation can be partly restored using an ultrasonic treatment (UST). The growth of the maximum output power of solar cells after the UST is related to a redistribution of the radiation defects and an increase in the homogeneity of a semiconductor crystal structure.
CTLA-4 blockade enhances polyfunctional NY-ESO-1 specific T cell responses in metastatic melanoma patients with clinical benefit (2008)

Blockade of inhibitory signals mediated by cytotoxic T lymphocyte-associated antigen 4 (CTLA-4) has been shown to enhance T cell responses and induce durable clinical responses in patients with metastatic melanoma. The functional impact of anti-CTLA-4 therapy on human immune responses is still unclear. To explore this, we analyzed immune-related adverse events and immune responses in metastatic melanoma patients treated with ipilimumab, a fully human anti-CTLA-4 monoclonal antibody. Fifteen patients were selected on the basis of availability of suitable specimens for immunologic monitoring, and eight of these showed evidence of clinical benefit. Five of the eight patients with evidence of clinical benefit had NY-ESO-1 antibody, whereas none of seven clinical non-responders was seropositive for NY-ESO-1. All five NY-ESO-1 seropositive patients had clearly detectable CD4(+) and CD8(+) T cells against NY-ESO-1 following treatment with ipilimumab. One NY-ESO-1 seronegative clinical responder also had a NY-ESO-1 CD4(+) and CD8(+) T cell response, possibly related to prior vaccination with NY-ESO-1. Among five clinical non-responders analyzed, only one had a NY-ESO-1 CD4(+) T cell response and this patient did not have detectable anti-NY-ESO-1 antibody. Overall, NY-ESO-1-specific T cell responses increased in frequency and functionality during anti-CTLA-4 treatment, revealing a polyfunctional response pattern of IFN-gamma, MIP-1beta and TNF-alpha. We therefore suggest that CTLA-4 blockade enhanced NY-ESO-1 antigen-specific B cell and T cell immune responses in patients with durable objective clinical responses and stable disease. These data provide an immunologic rationale for the efficacy of anti-CTLA-4 therapy and call for immunotherapeutic designs that combine NY-ESO-1 vaccination with CTLA-4 blockade.
Disulfide high mobility group box-1 causes bladder pain through bladder Toll-like receptor 4 (2017)

The disulfide form of HMGB1 mediates bladder pain directly (not secondary to inflammation or injury) through activation of TLR4 receptors in the bladder. Thus, TLR4 receptors are a specific local target for bladder pain.
Mannose-binding lectin and infection risk in newborns: a systematic review (2010)

The authors systematically reviewed the literature on mannose-binding lectin (MBL) and infections in newborns to determine whether infection risk is increased in MBL-deficient newborns. All original reports on MBL and infections in newborns were retrieved from Embase, Medline and CENTRAL from 1966 to December 2009. Information extracted from each article included study design, definitions of MBL deficiency and neonatal infection, follow-up period and risk factor analysis. The validity of each study was assessed. Eight prospective cohort studies, including 3166 (range 47-1832) premature or term neonates, were assessed. MBL levels were measured in five studies and MBL2 genotype in six studies. Definitions of MBL deficiency and infection varied. In three out of five phenotypic studies low MBL levels were statistically significantly associated with increased culture-confirmed sepsis rates, also after correction for gestational age or birth weight. In the first study, the median MBL level was decreased in newborns with confirmed sepsis (170 μg/l) compared with newborns without sepsis (1450 μg/l). In two other studies, culture-confirmed sepsis was associated with MBL levels ≤700 μg/l (OR 15.0, 95% CI 1.5 to 151.3) and ≤400 μg/l (OR 3.1), respectively. The remaining two studies investigated various non-culture-confirmed infections. Only one study included the timepoint of clinical suspicion of infection in multivariate analysis. Contradicting results were reported in six MBL2 genotypic studies. Newborns with low MBL levels appear to have culture-confirmed sepsis more frequently than MBL-sufficient newborns. However, the influence of confounding factors was analysed insufficiently. Variant MBL2 genotypes appear to have less influence.
SmartParking: A Secure and Intelligent Parking System (2011)

Parking is costly and limited in almost every major city in the world. Innovative parking systems for meeting near-term parking demand are needed. This paper proposes a novel, secure, and intelligent parking system (SmartParking) based on secured wireless network and sensor communication. From the point of users' view, SmartParking is a secure and intelligent parking service. The parking reservation is safe and privacy preserved. The parking navigation is convenient and efficient. The whole parking process will be a non-stop service. From the point of management's view, SmartParking is an intelligent parking system. The parking process can be modeled as birth-death stochastic process and the prediction of revenues can be made. Based on the prediction, new business promotion can be made, for example, on-sale prices and new parking fees. In SmartParking, new promotions can be published through wireless network. We address hardware/software architecture, implementations, and analytical models and results. The evaluation of this proposed system proves its efficiency.
Development and Use of Gene Transfer for Treatment of Cardiovascular Disease (2002)

Gene therapy holds promise for the treatment of cardiovascular diseases for which effective pharmacological therapies are insufficient or unavailable. Recent studies have suggested that modification of current gene delivery systems combined with the use of efficacious therapeutic genes may ultimately be successful for clinical vascular gene therapy. Although certain applications such as vein-graft failure may be best suited for short-term transient overexpression of therapeutic genes, other disorders including human essential hypertension and atherosclerosis require sustained overexpression of genes. Hence, design and use of vector systems for delivery of genes to the required site in vivo requires careful consideration. Both viral and nonviral gene therapy vectors show low efficiency for gene transfer into vascular cells and demonstrate a lack of selectivity, as vectors have natural tropism for other cells and tissues. Recent work has focused on the design, development, and utility of vascular cell-selective gene therapy vectors for use in distinct and diverse vascular gene therapy scenarios. Using phage display technology we have isolated small peptide ligands that mediate selective binding to either vascular endothelial cells or vascular smooth muscle cells. When engineered into either adenoviral (Ad) or adeno-associated viral (AAV) vectors, candidate peptides enabled the virus to selectively bind to the desired cell type thus generating novel vascular cell-selective gene transfer. As preclinical studies have highlighted both the potential for vascular gene therapy as well as defining the potential pitfalls, the development of disease-selective gene therapeutics will increase safety and efficiency of gene therapy for future clinical use.
Autofluorescence Spectroscopy of Normal and Malignant Human Breast Cell Lines¶ (2003)

The fluorescence of tryptophan, reduced nicotinamide adenine dinucleotide (phosphate) (NAD(P)H) and flavin adenine dinucleotide (FAD) were characterized in normal human breast cells as well as in malignant human breast cells of similar and dissimilar genetic origins. Fluorescence measurements of each cell line were made over a wide range of cell concentrations, and the fluorescence per cell was determined from the slope in the linear range of the fluorescence intensity vs cell concentration plot. All of the malignant cells showed a statistically significant decrease in the tryptophan fluorescence per cell relative to that of the normal cells. No statistically significant differences were observed in the NAD(P)H or FAD fluorescence per cell between the normal and any of the malignant cell types. NAD(P)H fluorescence was also imaged from monolayers of the normal and malignant cells (of similar genetic origin) using two-photon fluorescence microscopy. A statistically significant decrease in the NAD(P)H fluorescence with malignancy was observed, suggesting that fluorescence imaging of single cells or the cell monolayer preparation may provide more contrast than volume-averaged fluorescence measurements of cells in suspension. In conclusion, the differences in normal and malignant human breast tissue fluorescence spectra may be attributed in part to differences in the intrinsic cellular fluorescence of normal and malignant breast epithelial cells.
Depth-resolved optic axis orientation in multiple layered anisotropic tissues measured with enhanced polarization-sensitive optical coherence tomography (EPS-OCT) (2005)

Enhanced polarization-sensitive optical coherence tomography (EPS-OCT) is a noninvasive cross-sectional imaging technique capable of quantifying with high sensitivity the optically anisotropic properties of fibrous tissues. We present a method to measure the depth-resolved optic axis orientations in superficial and deep regions of multiple-layered form-birefringent tissue. Additionally, the bulk-optic EPS-OCT instrument provides anatomical fiber direction referenced absolutely to the laboratory frame, in contrast with fiber-based PS-OCT instruments which provide relative optic axis orientation measurements. Results presented on ex vivo murine tail tendon and porcine annulus fibrosis indicate that the method iscapable of characterizing depth-resolved fiber direction [ theta(z)], form-birefringence [Deltan(z)], and form-biattenuance [Delta chi(z)] for at least 10 successive lamellae and a depth of 0.52 mm into the intervertebral disc. Noninvasive assessment of optic axis orientation by EPS-OCT provides increased contrast in images of multiple-layered media and may improve the understanding of fibrous tissue ultrastructure and the diseases or traumas that affect fibrous tissues.