gebhart/patrepeval huggingface dataset:
Shaped Torque Techniques (1980)

Procedures are developed for synthesizing torque waveforms to optimally move a mechanical element of a structure so that the mechanical modes of oscillation of the structure are left unexcited at the end of the movement. A primary application of these procedures is in spacecraft missions that require reorientation of parts of the sparecraft without exciting resonant modes of the overall structure. The same procedures can synthesize driving force waveforms for translation of mechanical elements with mode suppression and can synthesize multiple torque and force waveforms with mode suppression in large complex structures. Constraints on the waveform synthesis procedure generally require that the resonant modes of the structure be excited during the torque period. At the end of the torque period, all of the resonant modes (and their derivatives) can be brought to zero amplitude. The torque synthesis procedure obtains the driver waveform that satisfies the boundary conditions on the structural modes. An analytic computer simulation is developed and exercised to obtain these shaped torque waveforms and the responses of the modes of selected structures. A hardware structure has been developed and exercised to evaluate the effects of error sources on this technique.
Fast calculation of the exact radiological path for a three‐dimensional CT array (1985)

Ready availability has prompted the use of computed tomography (CT) data in various applications in radiation therapy. For example, some radiation treatment planning systems now utilize CT data in heterogeneous dose calculation algorithms. In radiotherapy imaging applications, CT data are projected onto specified planes, thus producing “radiographs,” which are compared with simulator radiographs to assist in proper patient positioning and delineation of target volumes. All these applications share the common geometric problem of evaluating the radiological path through the CT array. Due to the complexity of the three‐dimensional geometry and the enormous amount of CT data, the exact evaluation of the radiological path has proven to be a time consuming and difficult problem. This paper identifies the inefficient aspect of the traditional exact evaluation of the radiological path as that of treating the CT data as individual voxels. Rather than individual voxels, a new exact algorithm is presented that considers the CT data as consisting of the intersection volumes of three orthogonal sets of equally spaced, parallel planes. For a three‐dimensional CT array of N 3 voxels, the new exact algorithm scales with 3 N , the number of planes, rather than N 3 , the number of voxels. Coded in fortran‐77 on a VAX 11/780 with a floating point option, the algorithm requires approximately 5 ms to calculate an average radiological path in a 100 3 voxel array.
Characterization of Complex Formation by Humanized Anti-IgE Monoclonal Antibody and Monoclonal Human IgE (1995)

The interaction of human IgE with high-affinity IgE Fc receptors on cells of the immune system plays an essential role in the type I hypersensitivity reaction. A proposed therapy is to use an anti-IgE monoclonal antibody to block the binding of IgE to its high-affinity receptor on mast cells and basophils, thus preventing subsequent release of the inflammatory agents after exposure to allergen. We report here the solution characteristics of immune complexes formed by a humanized anti-IgE monoclonal antibody (rhuMAb E25) and IgE using sedimentation analysis and size exclusion chromatography. We demonstrate that the rhuMAb E25 is able to form a variety of complexes with IgE at different molar ratios. The largest complex was identified by sedimentation equilibrium analysis as a heterohexamer with very high stability. The intermediate complex formed when one of the interacting components is in large molar excess appears to have a trimeric structure. The high-affinity interaction of rhuMAb E25 and IgE has also been confirmed. Furthermore, by using hydrodynamic modeling, we show that the largest complex may be represented by a cyclic structure.
Control of proliferating potential of myeloid leukemia cells during long-term treatment with vitamin D3 analogues and other differentiation inducers in combination with antileukemic drugs: in vitro and in vivo studies. (1987)

Growth inhibition of murine and human myeloid leukemia cells by differentiation inducers during long-term culture was examined to improve the strategy for therapy of myeloid leukemia by differentiation inducers. When the effect of 1 alpha,25-dihydroxyvitamin D3, a typical differentiation inducer, on proliferation of mouse myeloid leukemia M1 cells was examined at a constant product of time and concentration (480 nM in 20 days), the continuous treatment with 24 nM 1 alpha,25-dihydroxyvitamin D3 was the most effective for inhibition of cell proliferation. After 20 days, the cumulative cell number was reduced about 3 X 10(5) times by continuous treatment with 24 nM 1 alpha,25-dihydroxyvitamin D3. Similar results were obtained when M1 cells were treated continuously with dexamethasone. M1 cells resistant to 1 alpha,25-dihydroxyvitamin D3 appeared about 25 days after the start of continuous treatment with 24 nM 1 alpha,25-dihydroxyvitamin D3. On the other hand, when M1 cells were treated continuously with 1 alpha,25-dihydroxyvitamin D3 and noncytotoxic doses of antileukemic drugs such as 1-beta-D-arabinofuranosylcytosine and daunomycin, resistant cells did not appear for at least 35 days. A similar effect of 1 alpha,25-dihydroxyvitamin D3 and antileukemic drugs on cell proliferation was observed with the human monoblast-like cell line U937. The survival of syngeneic SL mice inoculated with M1 cells was prolonged more by treatment with both 1 alpha-hydroxyvitamin D3 and daunomycin than by treatment with either drug alone. These results suggest that continuous treatment with both differentiation inducers and certain antileukemic drugs may be more effective therapeutically than treatment with a differentiation inducer alone.
Mapping and sequencing DNA using nanopores and nanodetectors (2012)

Even prior to the introduction of capillary DNA sequencers, nanopores were discussed as a low-cost, high-throughput substrate for sequencing. Since then, other next-generation sequencing technologies have been developed and achieved widespread use, but nanopores have lagged behind due to difficulties in generating usable sequence data. The practical and theoretical issues of translocation speed and signal detection encountered when attempting to sequence DNA with nanopores are discussed. Various methods that different laboratories have used to overcome difficulties in biologically based and solid-state nanopores are also presented. Different approaches designed to circumvent the overriding issue of detecting signals from individual bases in a time-resolved manner in nanopores are described. For example, genomic positional sequencing utilizes hybridization of short oligonucleotide probes to very long DNA templates and then detects these probes by variations in current blockade in solid-state nanodetectors. The positions of the probes relative to each other and relative to the ends of the DNA are determined by measuring the time between current blockade peaks. By assembling many such measurements, it is possible to overcome the problems encountered when attempting to sequence DNA at high speed in nanopores, providing the potential for true de novo sequencing of large genomes on a routine basis.
Human leukocyte antigen subtype analysis in patients with advanced adenocarcinoma of the prostate (1994)

Human leukocyte antigens (HLA) are cell surface glycoproteins that have a significant role in the immune system. In some cancers, changes in major histocompatibility complex (MHC) class I and II expression, usually a reduction or loss of these molecules, appear to provide a mechanism whereby tumor cells may escape host immunity. HLA analysis in patients with advanced adenocarcinoma of the prostate revealed the antigens with the highest relative risk factors as DRw52, DRw53, Bw73, DR2, and B5(51). As a result, determination of HLA haplotypes may prove to be useful in determining the men with a higher risk of developing prostate cancer.
Lithium aluminum hydride reduction products from heterocycles containing an isoindolone nucleus (1969)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTLithium aluminum hydride reduction products from heterocycles containing an isoindolone nucleusPaul Aeberli and William J. HoulihanCite this: J. Org. Chem. 1969, 34, 6, 1720–1726Publication Date (Print):June 1, 1969Publication History Published online1 May 2002Published inissue 1 June 1969https://pubs.acs.org/doi/10.1021/jo01258a042https://doi.org/10.1021/jo01258a042research-articleACS PublicationsRequest reuse permissionsArticle Views181Altmetric-Citations13LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts
The effects of Δ9‐tetrahydrocannabinol and cannabidiol alone and in combination on damage, inflammation andin vitromotility disturbances in rat colitis (2010)

In this model of colitis, THC and CBD not only reduced inflammation but also lowered the occurrence of functional disturbances. Moreover the combination of CBD and THC could be beneficial therapeutically, via additive or potentiating effects.
Responses of Human Medial Temporal Lobe Neurons Are Modulated by Stimulus Repetition (2009)

Recent studies have reported the presence of single neurons with strong responses to visual inputs in the human medial temporal lobe. Here we show how repeated stimulus presentation--photos of celebrities and familiar individuals, landmark buildings, animals, and objects--modulates the firing rate of these cells: a consistent decrease in the neural activity was registered as images were repeatedly shown during experimental sessions. The effect of repeated stimulus presentation was not the same for all medial temporal lobe areas. These findings are consistent with the view that medial temporal lobe neurons link visual percepts to declarative memory.
X-ray microtomography studies of localised corrosion and transitions to stress corrosion cracking (2006)

Two forms of high resolution X-ray tomographic experiments (i.e. synchrotron based X-ray microtomography and desktop microfocus computed X-ray tomography) are demonstrated in the present paper to illustrate the wide application of these techniques for qualitative and quantitative studies of localised corrosion and environmentally assisted cracking. Specifically, synchrotron based X-ray tomography was used to investigate the localised corrosion morphology within aluminium specimens when exposed in situ to a chloride environment while microfocus computed X-ray tomography was used to investigate the morphology and quantify the transition from localised corrosion to stress corrosion cracking in steel specimens exposed ex situ to a simulated corrosive condensate environment.
Interoperable, life-cycle tools for assuring Building Performance: An Overview of a Commercial Building Initiative (1996)

A key impediment to improving the energy efficiency and reducing the environmental impact of buildings is the complexity and cost of managing information over the life cycle of a building.A surprisingly large fraction of the total cost of buildings is embodied in the decision making and information management process due to the structure of the building industry, the numerous people and companies involved in the process, the current nature of the building acquisition process, and the long time periods over which buildings operate once design and construction are completed.We suggest that new interoperable software tools could greatly facilitate and rationalize this complex process, thereby reducing time and cost, and greatly improving the habitability and environmental impact of these buildings.We describe a series of projects in which we are building and testing several prototype toolkits as part of a building life-cycle information system that will allow interoperable software tools to function more effectively throughout the design, construction, commissioning, and operations phases.
Sozialpolitik: Perspektiven der Soziologie (2002)

Die Bezeichnung Social-Politik entstand im Rahmen der deutschen Staats- und Sozialwissenschaft in der Vorphase der Ereignisse von 1848. Im Horizont der von Hegel eingeführten Unterscheidung von Staat und Gesellschaft bezeichnete Sozialpolitik sehr allgemein die Vermittlung zwischen marktgesellschaftlicher Privatsphäre und rechtsstaatlicher Öffentlichkeit zur Lösung der ‚socialen Frage‘ Während im Vormärz die soziale Frage noch als Problem des Pauperismus definiert wurde, verschob sich deren Sinngehalt in der Folge zur ‚Arbeiterrage‘ Dementsprechend bezeichnete Sozialpolitik seit den 1880er Jahren alle Bemühungen zur Behebung der spezifischen Nöte der Industriearbeiter. Durch die Kathedersozialisten des Vereins für Socialpolitik und erst recht durch die Bismarcksche Sozialgesetzgebung erhielt der Begriff zunehmend eine staatspolitische Färbung, doch blieben Wortverbindungen wie berufsständische, kommunale oder betriebliche Sozialpolitik erhalten.
Synergistic Effects of IL-4 and IL-18 on IL-12-Dependent IFN-γ Production by Dendritic Cells (2000)

Mouse splenic dendritic cells (DCs) produce IFN-gamma in response to IL-12. In the present study, we analyzed effects of Th1 and Th2 cytokines on IFN-gamma production by DCs. IL-18 produced by DCs and macrophages acts in an autocrine manner and augments IL-12-induced IFN-gamma production by DCs as also observed in T and NK cells. Surprisingly, IL-4, a Th2 cytokine, also acts synergistically with IL-12 on IFN-gamma production by DCs. In addition, IL-4 markedly enhances IFN-gamma production when DCs are stimulated through CD40 or MHC class II. These results indicate that both Th1 and Th2 cytokines act on DCs during T cell-DC interaction upon Ag presentation. p38 mitogen-activated protein kinase is constitutively activated in mature DCs and is required for IFN-gamma production by DCs. IL-18 but not IL-4 or IL-12 further activates the p38 mitogen-activated protein kinase activity, suggesting that IL-4 and IL-18 enhance IFN-gamma production through distinct intracellular signal transduction pathways in DCs.
Error correction of next-generation sequencing data and reliable estimation of HIV quasispecies (2010)

Next-generation sequencing technologies can be used to analyse genetically heterogeneous samples at unprecedented detail. The high coverage achievable with these methods enables the detection of many low-frequency variants. However, sequencing errors complicate the analysis of mixed populations and result in inflated estimates of genetic diversity. We developed a probabilistic Bayesian approach to minimize the effect of errors on the detection of minority variants. We applied it to pyrosequencing data obtained from a 1.5-kb-fragment of the HIV-1 gag/pol gene in two control and two clinical samples. The effect of PCR amplification was analysed. Error correction resulted in a two- and five-fold decrease of the pyrosequencing base substitution rate, from 0.05% to 0.03% and from 0.25% to 0.05% in the non-PCR and PCR-amplified samples, respectively. We were able to detect viral clones as rare as 0.1% with perfect sequence reconstruction. Probabilistic haplotype inference outperforms the counting-based calling method in both precision and recall. Genetic diversity observed within and between two clinical samples resulted in various patterns of phenotypic drug resistance and suggests a close epidemiological link. We conclude that pyrosequencing can be used to investigate genetically diverse samples with high accuracy if technical errors are properly treated.
Cloning and expression of daunorubicin biosynthesis genes from Streptomyces peucetius and S. peucetius subsp. caesius (1990)

Genes for the biosynthesis of daunorubicin (daunomycin) and doxorubicin (adriamycin), important antitumor drugs, were cloned from Streptomyces peucetius (the daunorubicin producer) and S. peucetius subsp. caesius (the doxorubicin producer) by use of the actI/tcmIa and actIII polyketide synthase gene probes. Restriction mapping and Southern analysis of the DNA cloned in a cosmid vector established that the DNA represented three nonoverlapping regions of the S. peucetius subsp. caesius genome. These three regions plus an additional one that hybridized to the same probes are present in the S. peucetius genome, as reported previously (K. J. Stutzman-Engwall and C. R. Hutchinson, Proc. Natl. Acad. Sci. USA 86:3135-3139, 1989). Functional analysis of representative clones from some of these regions in S. lividans, S. peucetius ATCC 29050, S. peucetius subsp. caesius ATCC 27952, and two of its blocked mutants (strains H6101 and H6125) showed that many of the antibiotic production genes reside in the region of DNA represented by the group IV clones. This conclusion is based on the production of epsilon-rhodomycinone, a key intermediate of the daunorubicin pathway, in certain S. lividans transformants and on the apparent complementation of mutations that block daunorubicin biosynthesis in strains H6101 and H6125. Some of the transformants of strains 29050, 27952, and H6125 exhibited substantial overproduction of epsilon-rhodomycinone and daunorubicin.
Differential modulation of cyclin gene expression by MYC. (1993)

We have investigated the effects of deregulated expression of the human c-MYC protooncogene on cyclin gene expression and on the transcription factor E2F. We found that constitutive expression of MYC or activation of conditional MycER chimeras led to higher levels of cyclin A and cyclin E mRNA. Activation of cyclin A expression by MYC led to a growth factor-independent association of cyclin A and cdk2 with the transcription factor E2F and correlated with an increase in E2F transcriptional activity. In contrast, expression of the G1 phase cyclin D1 was strongly reduced in MYC-transformed cells. In synchronized cells, repression of cyclin D1 by MYC occurred very early in the G1 phase of the cell cycle.
Genetic Tracing Shows Segregation of Taste Neuronal Circuitries for Bitter and Sweet (2005)

The recent discovery of mammalian bitter, sweet, and umami taste receptors indicates how the different taste qualities are encoded at the periphery. However, taste representations in the brain remain elusive. We used a genetic approach to visualize the neuronal circuitries of bitter and sweet tastes in mice to gain insight into how taste recognition is accomplished in the brain. By selectively expressing a transsynaptic tracer in either bitter- or sweet and/or umami-responsive taste receptor cells, and by comparing the locations of the tracer-labeled neurons in the brain, our data revealed the potential neuronal bases that underlie discrimination of bitter versus sweet.
First Clinical Results With the Femtosecond Neodynium-glass Laser in Refractive Surgery (2003)

Femtosecond lasers can produce precise intrastromal cutting, offering significant safety and other advantages (no razor blades, corneal trauma, partial resections, or sterilization issues) over current techniques.
A Nanoporous, Transparent Microcontainer for Encapsulated Islet Therapy (2009)

Present-day islet encapsulation techniques such as polymer microcapsules and microelectromechanical system (MEMS)-based biocapsules have shown promise in insulin replacement therapy, but they each have limitations-the permeability characteristics of existing polymeric capsules cannot be strictly controlled because of tortuosity and the large size of present-day MEMS biocapsules leads to necrotic regions within the encapsulation volume. We report on a new microcontainer to encapsulate and immunoprotect islets/beta cells that may be used for allo- or xenotransplantation in cell-based therapy. The microcontainers have membranes containing nanoslots to permit the bidirectional transport of nutrients, secretagogues, and cellular products while immunoprotecting the encapsulated cells. The 300-microm microcontainers were fabricated from an epoxy-based polymer, SU-8, with 50-microm-thick walls. Arrays of 25-nm wide slots were created in the SU-8 microcontainer lid. Isolated mouse islets were encapsulated in the microcontainer, and their physiological response to glucose was studied with fluorescence and two-photon imaging over 48 hours. The physiological response of the encapsulated islets was indistinguishable from controls. An agarose-filled microcontainer was imaged with magnetic resonance imaging to demonstrate the feasibility of future noninvasive, in vivo imaging. The SU-8 microcontainers maintained mechanical integrity upon islet loading and mechanical manipulation. Islet encapsulation, as well as the ability to visualize islet function within these transparent microcontainers, was demonstrated.
Noninflammatory mechanisms of airway hyper-responsiveness in bronchial asthma: an overview (2009)

Airway hyper-responsiveness (AHR) is a cardinal feature of asthma. Its absence has been considered useful in excluding asthma, whereas it may be present in other diseases such as atopic rhinitis and chronic obstructive pulmonary disease. AHR is often considered an epiphenomenon of airway inflammation. Actually, the response of airways to constrictor stimuli is modulated by a complex array of factors, some facilitating and others opposing airway narrowing. Thus, it has been suggested that AHR, and perhaps asthma, might be present even without or before the development of airway inflammation. We begin this review by highlighting some terminological and methodological issues concerning the measurement of AHR. Then we describe the neurohumoral mechanisms controlling airway tone. Finally, the pivotal role of airway smooth muscle and internal and external modulation of airway caliber in vivo are discussed in detail.