gebhart/patrepeval huggingface dataset:
Stereotactic external beam irradiation system. (1992)

Stereotactic localization is of vital importance in treating small intracranial lesions either with interstitial or external beam irradiation. This article describes a simple, fast, accurate, and verifiable system that can be used with a standard computerized axial tomography (CAT) scanner and linear accelerator for stereotactic external beam irradiation.
[Surgical interventions in dialysis fistulae]. (1999)

Repeated percutaneous interventional procedures in patient with hemodialysis shunts can extent shunt patency. Despite relatively low primary patency rate we can achieved good primary assisted or secondary patency rate in patients with stenoses of shunt.
Findings to date from the ASCUS-LSIL Triage Study (ALTS). (2003)

Controversy exists in the United States regarding the proper evaluation and management of low-grade squamous intraepithelial lesion (LSIL) and equivocal (atypical squamous cells of undetermined significance [ASCUS, now ASC-US]) cervical cytologic interpretations. To address this issue, the National Cancer Institute initiated the ASCUS-LSIL Triage Study (ALTS). ALTS is a multicenter, randomized clinical trial designed to evaluate 3 alternative methods of management, namely, immediate colposcopy, cytologic follow-up, and triage by human papillomavirus (HPV) DNA testing. This article summarizes the major findings of ALTS that have been published to date. Patients with ASCUS (n = 3488) or LSIL (n = 1572) were randomly assigned to research arms between November 1996 and December 1998, and were monitored for 2 years. The disease outcome was histologic cervical intraepithelial neoplasia (CIN) 3/cancer. The prevalence of oncogenic HPV was too high to permit effective triage of LSIL using HPV DNA testing by Hybrid Capture 2. However, for the women referred with a cytologic interpretation of ASCUS, HPV triage proved useful, with sensitivity equivalent to immediate colposcopy and a halving of colposcopic referrals. Among older women with ASCUS, HPV testing remained sensitive for detecting CIN 3 and cancer, but the referral percentage was dramatically lower compared to younger women. ALTS yielded insight into the performance of cytology and histopathology; experienced pathologists differed significantly in their interpretations of cervical abnormalities, especially histologic CIN 1 and cytologic ASCUS. Nonetheless, it was possible to distinguish a relatively uncommon type of ASCUS, equivocal for high-grade squamous intraepithelial lesion, that has a high positive predictive value for identifying women with underlying high-grade CIN. Many additional analyses are underway.
Silicon modulator based on mechanically-active anti-reflection layer with 1 mbit/sec capability for fiber-in-the-loop applications (1994)

We present a micromechanical modulator for fiber-in-the-loop applications with projected optical bandwidths from 1.3 to 1.55 μm and data rates of several Mbits/sec. The device behaves as a damped oscillator. We have made a device with a ringing frequency of 1.1 MHz and a damping time constant of 1 μs. We indicate that with an appropriate linear filter the device could operate digitally with data rates of 1 Mbit/sec.
Identification, Characterization, and Function of a Novel Oncogene (2003)

By means of retroviral insertional mutagenesis, we identified a novel common virus integration site (cVIS) (Evi11) in murine leukemias, and demonstrated that Cb2, encoding the peripheral cannabinoid receptor, is the potential proto-oncogene located in that region. Cb2 is a 7-transmembrane G protein-coupled receptor (GPCR), which is normally expressed on B lymphocytes. Using transwell assays we observed strong migration of Cb2-expressing cells upon stimulation with 2-arachidonoylglycerol (2-AG), a potent endocannabinoid. Overexpression of Cb2 receptor on murine myeloid precursor cells causes a block of neutrophilic differentiation, a major characteristic of myeloid leukemia. Intriguingly, we could not detect functional Cb2 receptors on normal murine bone marrow precursor cells. Furthermore, analysis of human acute myeloid leukemia (AML) samples revealed the presence of CB2 mRNA transcripts in several cases. Furthermore, migration could be induced by 2-AG when analyzed in one of the patient samples. Our data suggest that the initially identified cVIS, Evi11, encodes for a murine onco-protein and that human CB2 may be involved in certain cases of human AML as well.
Taxonomy, structure and implementation of evidential reasoning models (1986)

The fundamental elements of evidential reasoning problems are described, followed by a discussion of the structure of various types of problems. Bayesian inference networks and state space formalism are used as the tool for problem representation.

A human-oriented decision making cycle for solving evidential reasoning problems is described and illustrated for a military situation assessment problem. The implementation of this cycle may serve as the basis for an expert system shell for evidential reasoning; i.e. a situation assessment processor.
Beneficial bacteria enhance plant growth (1979)

Bacterization, the application of bacteria to soil and plant parts to promote growth and crop yield, was pioneered in the Soviet Union and now appears to be in the offing here, once methods for storing and applying have been improved.
The reaction of Singlet Oxygen with 1-Methoxycyclohexene (1978)

l-Methoxycyclohexene (1) on photosensitized oxygenation yields the two allylic hydroperoxides 2 and 3 and the dioxetane 4. In a slower reaction 2, which is still an enol ether, is further photo-oxidized.The initial oxidation products are all thermally unstable, but analytical procedures are described by which their amounts can be determined.The rate of oxygenation and the proportion of 3 are both approximately doubled in benzene compared to acetonitrile as solvent.The mechanism of the reaction is discussed in the light-of this and related evidence recently developed for the 2,3-dihydro-4H-pyrans.
OK-432 Suppresses Proliferation and Metastasis by Tumor Associated Macrophages in Bladder Cancer (2015)

OK-432, a Streptococcus-derived anticancer immunotherapeutic agent, has been applied in clinic for many years and achieved great progress in various cancers. In the present study, we investigated its anticancer effect on bladder cancer through tumor associated macrophages (TAMs). MTS assay validated OK-432 could inhibit proliferation in both T24 and EJ bladder cell lines. OK-432 also induced apoptosis of bladder cancer cells in vitro. Consequently, we demonstrated that OK-432 could suppress the bladder cancer cells migration and invasion by altering the EMT-related factors. Furthermore, using SD rat model, we revealed that OK-432 inhibited tumor growth, suppressed PCNA expression and inhibited metastasis in vivo. Taken together, these findings strongly suggest that OK-432 inhibits cell proliferation and metastasis through inducing macrophages to secret cytokines in bladder cancer.
Specific residues at every third position of siRNA shape its efficient RNAi activity (2007)

Small interfering RNA (siRNA) induces sequence-specific post-transcriptional gene silencing in mammalian cells. Different efficacy of each siRNA is considered to result from sequence preference by protein components in RNAi. To obtain mechanistic insight into siRNA functionality, here we describe a complete data set of siRNA activities targeting all possible position of a single mRNA in human cells. Seven hundred and two siRNAs covering open reading frame of enhanced green fluorescent protein mRNA ( 720 bases) were examined with minimized error factors. The most important finding is that specific residues at every third position of siRNAs greatly influence its RNAi activity; the optimized base composition at positions 3n + 1 (4,7,10,13,16,19) in siRNAs have positive effects on the activity, which can explain the waving siRNA activity with 3 nucleotides (nt) periodicity in the sequential positions of mRNAs. Since there was an obvious correlation between siRNA activity and its binding affinity to TRBP, a partner protein of human Dicer, the 3-nt periodicity might correlate with the affinity to TRBP. As an algorithm ('siExplorer') developed by this observation successfully calculated the activities of siRNAs targeting endogenous human genes, the 3-nt periodicity provides a new aspect unveiling siRNA functionality.
Synthesis and characterization of a novel nitrogen‐containing flame retardant (2004)

Abstract The lowering of ignitability and flammability of polyethylene (PE) and the production of fire‐retarding materials has become an urgent problem because of the demand of fire safety. In our article, a new charring agent (CA), a derivative of triazines, was synthesized by charging 2‐amino‐4,6‐dichloro‐s‐triazines and diethylenetriamine into a reactor to conduct the solution polycondensation reaction, and the synthetic conditions of monomer and CA, such as temperature, time, etc., were investigated. Both the monomer and the resulting polymer were characterized by mass spectrum (MS), Fourier transform infrared (FTIR) spectroscopy, 1 HNMR, and elemental analysis. The intrinsic viscosities and flame‐retardancy property of CA were also studied. It was found that the incorporation of ammonium polyphosphate (APP) and CA into low‐density polyethylene (LDPE) has a distinct effect on thermal and flame‐retardancy behavior. © 2004 Wiley Periodicals, Inc. J Appl Polym Sci 94: 1556–1561, 2004
Optical properties and structure of HfO2thin films grown by high pressure reactive sputtering (2007)

Thin films of hafnium oxide have been grown by high pressure reactive sputtering on transparent quartz substrates (UV-grade silica) and silicon wafers. Deposition conditions were adjusted to obtain polycrystalline as well as amorphous films. Optical properties of the films deposited on the silica substrates were investigated by transmittance and reflectance spectroscopy in the ultraviolet, visible and near infrared range (UV-VIS-NIR). A numerical analysis method that takes into account the different surface roughness of the polycrystalline and amorphous films was applied to calculate the optical constants (refractive index and absorption coefficient). Amorphous films were found to have a higher refractive index and a lower transparency than polycrystalline films. This is attributed to a higher density of the amorphous samples, which was confirmed by atomic density measurements performed by heavy-ion elastic recoil detection analysis (ERDA). The absorption coefficient gave an excellent fit to the Tauc law (indirect gap), which allowed to obtain a band gap value of 5.54 eV. The structure of the films (amorphous or polycrystalline) was found to have no significant influence on the nature of the band gap. The Tauc plots also give information about the structure of the films, because the slope of the plot (the Tauc parameter) is related to the degree of order in the bond network. The amorphous samples had a larger value of the Tauc parameter, i.e., more order than the polycrystalline samples. This is indicative of a uniform bond network with percolation of the bond chains, in contrast to the randomly oriented polycrystalline grains separated by grain boundaries.
Targeted gene inactivation in petunia by PCR-based selection of transposon insertion mutants. (1995)

Establishment of loss-of-function phenotypes is often a key step in determining the biological function of a gene. We describe a procedure to obtain mutant petunia plants in which a specific gene with known sequence is inactivated by the transposable element dTph1. Leaves are collected from batches of 1000 plants with highly active dTph1 elements, pooled according to a three-dimensional matrix, and screened by PCR using a transposon- and a gene-specific primer. In this way individual plants with a dTph1 insertion can be identified by analysis of about 30 PCRs. We found insertion alleles for various genes at a frequency of about 1 in 1000 plants. The plant population can be preserved by selfing all the plants, so that it can be screened for insertions in many genes over a prolonged period.
The Pim protein kinases regulate energy metabolism and cell growth (2010)

The serine/threonine Pim kinases are overexpressed in solid cancers and hematologic malignancies and promote cell growth and survival. Here, we find that a novel Pim kinase inhibitor, SMI-4a, or Pim-1 siRNA blocked the rapamycin-sensitive mammalian target of rapamycin (mTORC1) activity by stimulating the phosphorylation and thus activating the mTORC1 negative regulator AMP-dependent protein kinase (AMPK). Mouse embryonic fibroblasts (MEFs) deficient for all three Pim kinases [triple knockout (TKO) MEFs] demonstrated activated AMPK driven by elevated ratios of AMPATP relative to wild-type MEFs. Consistent with these findings, TKO MEFs were found to grow slowly in culture and have decreased rates of protein synthesis secondary to a diminished amount of 5'-cap-dependent translation. Pim-3 expression alone in TKO MEFs was sufficient to reverse AMPK activation, increase protein synthesis, and drive MEF growth similar to wild type. Pim-3 expression was found to markedly increase the protein levels of both c-Myc and the peroxisome proliferator-activated receptor gamma coactivator 1α (PGC-1α), enzymes capable of regulating glycolysis and mitochondrial biogenesis, which were diminished in TKO MEFs. Overexpression of PGC-1α in TKO MEFs elevated ATP levels and inhibited the activation of AMPK. These results demonstrate the Pim kinase-mediated control of energy metabolism and thus regulation of AMPK activity. We identify an important role for Pim-3 in modulating c-Myc and PGC-1α protein levels and cell growth.
Molecular basis of multiple UDP-glucuronosyltransferase isoenzyme deficiencies in the hyperbilirubinemic rat (Gunn rat). (1991)

The Gunn rat is a mutant strain of Wistar rat which has unconjugated hyperbilirubinemia as a result of the absence of hepatic UDP-glucuronosyltransferase (UDPGT) activity toward bilirubin. The Gunn rat is also deficient in UDPGT activities toward phenol substrates, and also toward digitoxigenin-monodigitoxiside. We have demonstrated that the defect of the isoenzyme for 4-nitrophenol (4NP) in Gunn rat liver arises from a -1 frameshift mutation that removes 115 amino acids from the COOH terminus (Iyanagi, T., Watanabe, T., and Uchiyama, Y. (1989) J. Biol. Chem. 264, 21302-21307). To investigate the molecular basis of defects in other UDPGT isoenzymes, we isolated and sequenced cDNAs from a Gunn rat liver library using mutant 4NP-UDPGT cDNA as a probe. Three novel cDNAs were identified that had identical 3'-regions of 1362 base pairs containing a single-base deletion in the same position as that of the mutant 4NP-UDPGT cDNA. However, their 5'-regions, encoding the substrate-binding domain, showed no more than 40% homology to that of 4NP-UDPGT. These data provide evidence that defects in some UDPGT isoenzymes in the Gunn rat are caused by a single mutation that results in the formation of a common truncated COOH terminus. Furthermore, the data also suggest that these mRNAs are transcribed from a single gene and that the 5'-exons are transcribed independently and differentially spliced to common 3'-exons encoding the conserved domain.
Working memory and expertise in simultaneous interpreting (2004)

This study describes an experiment that aimed to determine if performance differences exist in simultaneous interpreting by individuals with similar general cognitive abilities, but different skills specific to the task of simultaneous interpreting. Professional interpreters’ performance in simultaneous interpreting from English into Mandarin was compared to that of two groups of student interpreters, beginners and advanced. The results showed that the professional interpreters who were not different from students in their general working memory capacity outperformed student interpreters.This difference was attributed, at least in part, to the development of specific skills in managing competing demands on limited cognitive resources. One important domain-specific skill observed in this study is the ability to select more important ideas from the speech input under conditions where stringent task demands jeopardize completeness and accuracy of the output.Professional interpreters’ generally superior performance is discussed withinthe descriptive framework of working memory theory.
Structural relaxation behavior of strain hardened shape memory polymer fibers for self‐healing applications (2013)

ABSTRACT In this study, shape‐memory polyurethane (SMPU) fibers were strain hardened by cold‐drawing programming (CDP) process. The programmed fibers are experimentally studied on the physical and thermomechanical properties. Structural relaxation, which determines shape memory capability of the SMP fibers, is quantified by conformational entropy change. Based on the entanglement tube theory and reptation theory, the entropic force is derived as a “bridge” to link the stress relaxation and structural relaxation, and thus structural relaxation can be evaluated by stress relaxation. It was found that the CDP SMPU fibers would still have good crackclosing capability after 13 years of hibernation in polymer matrix composite. © 2013 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys, 2013 , 51 , 966–977
Internet Privacy Enhanced Mail (1993)

article Free Access Share on Internet Privacy Enhanced Mail Author: Stephen T. Kent Bolt Beranek and Newman, Cambridge, MA Bolt Beranek and Newman, Cambridge, MAView Profile Authors Info & Claims Communications of the ACMVolume 36Issue 8Aug. 1993pp 48–60https://doi.org/10.1145/163381.163390Published:01 August 1993Publication History 71citation1,927DownloadsMetricsTotal Citations71Total Downloads1,927Last 12 Months98Last 6 weeks15 Get Citation AlertsNew Citation Alert added!This alert has been successfully added and will be sent to:You will be notified whenever a record that you have chosen has been cited.To manage your alert preferences, click on the button below.Manage my AlertsNew Citation Alert!Please log in to your account Save to BinderSave to BinderCreate a New BinderNameCancelCreateExport CitationPublisher SiteeReaderPDF
Disruption of virus-host cell interactions and cell signaling pathways as an anti-viral approach against influenza virus infections (2011)

Influenza is still one of the major plagues worldwide with the threatening potential to cause pandemics. In recent years, increasing levels of resistance to the four FDA approved anti-influenza virus drugs have been described. This situation underlines the urgent need for novel anti-virals in preparation for future influenza epidemics or pandemics. Although the anti-virals currently in use target viral factors such as the neuraminidase or the M2 ion channel, there is an increase in pre-clinical approaches that focus on cellular factors or pathways that directly or indirectly interact with virus replication. This does not only include inhibitors of virus-supportive signaling cascades but also interaction blockers of viral proteins with host cell proteins. This review aims to highlight some of these novel approaches that represent a paradigm change in anti-viral strategies against the influenza virus. Although most of these approaches are still in an early phase of preclinical development they might be very promising particularly with respect to the prevention of viral resistance to potential drugs.
The molecular basis of cancer suppression by the retinoblastoma gene. (1989)

A class of cellular genes in which loss-of-function mutations are tumorigenic has been proposed. Such genes would normally act to suppress the cancer phenotype at the cellular or organism level. The gene determining susceptibility to hereditary retinoblastoma (RB) appears to operate in exactly this fashion, and is the first cancer suppressor gene to be molecularly cloned. The RB gene contains 27 exons dispersed over more than 200 kb and ubiquitously expresses a 4.7 kb mRNA. From sequence analysis of RB cDNA clones, the predicted RB protein has 928 amino acids. The RB protein is a nuclear phosphoprotein capable of binding to DNA and forming a complex with oncoproteins of several DNA tumor viruses. Consistent with its ubiquitous expression pattern, RB gene inactivation was found in many other cancers such as osteosarcoma, breast carcinoma, small cell lung carcinoma and prostate carcinoma. A cloned RB gene was introduced, via retrovirus-mediated gene transfer, into such tumor cells that have inactivated endogenous RB genes. Expression of the exogenous RB gene consistently suppressed their tumorigenicity in nude mice, suggesting that RB may act as a general cancer suppressor. In an attempt to address the potential cellular function of this gene, we have observed that RB protein phosphorylation oscillates with cell-cycle and the unphosphorylated form is present predominantly in the G0/G1 phase. Furthermore, when cells were induced to differentiate only the unphosphorylated form of RB could be detected, suggesting that RB protein was modulated through phosphorylation, may play an important role in these cellular functions. A hypothesis is proposed to explain how RB participates in cell proliferation and differentiation and its role in tumorigenesis.
Experimentally Induced Septic Arthritis in Chimpanzees Infected with Mycoplasma hominis, Mycoplasma pneumoniae, and Ureaplasma urealyticum (1994)

Mycoplasma hominis was isolated in pure culture from septic synovial aspirates from an individual (patient A) during 16 different bouts of exacerbation over a 70-month period of observation. Two isolates, 10(7) and also 10(6) color-changing units (CCU) of the 1620 isolate and 5 x 10(4) CCU of the 1628 isolate, caused inflammation in chimpanzees inoculated intraarticularly. Inflammation was also induced with 10(7) CCU of the 2010B isolate, serovar VII of Ureaplasma urealyticum, recovered from an agammaglobulinemic individual (patient B) with septic polyarthritis and with 3 x 10(6) CCU of the PI-1428 isolate of Mycoplasma pneumoniae. Inflammation persisted for up to 36 days and was self-limiting. The aspirates contained up to 220,000 white blood cells/mm3 and up to 10(7) CCU/mL. There was good correlation between the severity of inflammation and the numbers of organisms, but antibody was not detected in aspirates during the peak severity of disease. As the numbers of organisms, decreased, detectable levels of antibody increased, thus suggesting that antibody may have been bound to antigen. Chimpanzees previously infected with either the 1628 isolate of M. hominis or the 2010B isolate of U. urealyticum were protected on challenge with > 100 times the minimal dose causing arthritis. Chimpanzees showed little or no inflammation when inoculated intraarticularly with 5 x 10(8) CCU of the type strain PG-21 of M. hominis or with the type strain CO of U. urealyticum or when inoculated intravenously with 3 x 10(8) CCU of the arthrogenic 1620 isolate of M. hominis.