gebhart/patrepeval huggingface dataset:
Results of Prevention of REStenosis with Tranilast and its Outcomes (PRESTO) Trial (2002)

Background— Restenosis after percutaneous coronary intervention (PCI) is a major problem affecting 15% to 30% of patients after stent placement. No oral agent has shown a beneficial effect on restenosis or on associated major adverse cardiovascular events. In limited trials, the oral agent tranilast has been shown to decrease the frequency of angiographic restenosis after PCI. Methods and Results— In this double-blind, randomized, placebo-controlled trial of tranilast (300 and 450 mg BID for 1 or 3 months), 11 484 patients were enrolled. Enrollment and drug were initiated within 4 hours after successful PCI of at least 1 vessel. The primary end point was the first occurrence of death, myocardial infarction, or ischemia-driven target vessel revascularization within 9 months and was 15.8% in the placebo group and 15.5% to 16.1% in the tranilast groups ( P =0.77 to 0.81). Myocardial infarction was the only component of major adverse cardiovascular events to show some evidence of a reduction with tranilast (450 mg BID for 3 months): 1.1% versus 1.8% with placebo ( P =0.061 for intent-to-treat population). The primary reason for not completing treatment was ≥1 hepatic laboratory test abnormality (11.4% versus 0.2% with placebo, P &lt;0.01). In the angiographic substudy composed of 2018 patients, minimal lumen diameter (MLD) was measured by quantitative coronary angiography. At follow-up, MLD was 1.76±0.77 mm in the placebo group, which was not different from MLD in the tranilast groups (1.72 to 1.78±0.76 to 80 mm, P =0.49 to 0.89). In a subset of these patients (n=1107), intravascular ultrasound was performed at follow-up. Plaque volume was not different between the placebo and tranilast groups (39.3 versus 37.5 to 46.1 mm 3 , respectively; P =0.16 to 0.72). Conclusions— Tranilast does not improve the quantitative measures of restenosis (angiographic and intravascular ultrasound) or its clinical sequelae.
A release mechanism for stored ATP in ocular ciliary epithelial cells (1998)

Purines can modify ciliary epithelial secretion of aqueous humor into the eye. The source of the purinergic agonists acting in the ciliary epithelium, as in many epithelial tissues, is unknown. We found that the fluorescent ATP marker quinacrine stained rabbit and bovine ciliary epithelia but not the nerve fibers in the ciliary bodies. Cultured bovine pigmented and nonpigmented ciliary epithelial cells also stained intensely when incubated with quinacrine. Hypotonic stimulation of cultured epithelial cells increased the extracellular ATP concentration by 3-fold; this measurement underestimates actual release as the cells also displayed ecto-ATPase activity. The hypotonically triggered increase in ATP was inhibited by the Cl--channel blocker 5-nitro-2-(3-phenylpropylamino)benzoic acid (NPPB) in both cell types. In contrast, the P-glycoprotein inhibitors tamoxifen and verapamil and the cystic fibrosis transmembrane conductance regulator (CFTR) blockers glybenclamide and diphenylamine-2-carboxylate did not affect ATP release from either cell type. This pharmacological profile suggests that ATP release is not restricted to P-glycoprotein or the cystic fibrosis transmembrane conductance regulator, but can proceed through a route sensitive to NPPB. ATP release also was triggered by ionomycin through a different NPPB-insensitive mechanism, inhibitable by the calcium/calmodulin-activated kinase II inhibitor KN-62. Thus, both layers of the ciliary epithelium store and release ATP, and purines likely modulate aqueous humor flow by paracrine and/or autocrine mechanisms within the two cell layers of this epithelium.
The Preparation of Buffers and Other Solutions: A Chemist's Perspective (2001)

The editor's grandfather told him of a Yiddish saying that translates into “if you ask two people one question, you get three answers”. The same principle often holds true for buffer preparation. The author of Chapter 3 is a meticulous chemist who describes the most frequent mistakes and misconceptions observed during two decades of analytical studies.
A novel model for human interstitial lung disease: Hapten‐driven lung fibrosis in rodents (1995)

A novel model is described of chronic pulmonary fibrosis in rodents. The condition is induced by a single intratracheal instillation of a well-characterized fluorescent haptenic antigen, fluorescein isothiocyanate (FITC), into non-immune animals. This results in an acute inflammatory response involving a granulocytic infiltrate, which disappears over a week and is replaced by a chronic mononuclear infiltrate in which T lymphocytes predominate. Over several months, a chronic patchy fibrosis is accompanied by a sustained mononuclear interstitial infiltrate localized at sites of persistent FITC deposition. Where no FITC is present, the lung tissues are apparently normal. An immune response is mounted, as measured by the appearance of specific anti-FITC serum antibodies. This model has relevance to the pathogenesis of some forms of human interstitial lung disease.
102. Conversion of hydroquinidine into hydrocinchonine and of cupreine into cinchonidine (1946)

H. King, J. Chem. Soc., 1946, 523 DOI: 10.1039/JR9460000523
New advances in the treatment of gout: review of pegloticase (2010)

Treatment-failure gout (TFG) affects approximately 50,000 patients or about 1% of the overall population of patients with gout in the United States of America. The severity of TFG is manifested by frequent acute attacks of disabling arthritis, chronic deforming joint disease, destructive masses of urate crystals (tophi), progressive physical disability, and poor health-related quality of life. Pegloticase (Krystexxa(®); Savient Pharmaceuticals, Inc), a novel PEGylated urate oxidase (uricase) enzyme, has been resubmitted for US Food and Drug Administration approval. In a 6-month, placebo-controlled clinical trial, 8 mg of pegloticase for every 2 weeks induced a lytic decrease of serum urate (sUr) concentrations, leading to dissolution of tophi in 40% of patients at final visit. However, 58% were nonresponders to the defined target sUr of 0.36 mmol/L (80% were nonresponders during months 3 and 6), possibly due to anti-body formation. Also, 26%-31% experienced infusion reactions (IRs) and 77% suffered from gout flares. Although long-term data are awaited, an anti-inflammatory strategy, eg, based on glucocorticosteroids, is needed to prevent pegloticase antibody formation leading to IRs and diminished or shortened efficacy, and might also prevent gout flares. According to the current clinical data, pegloticase might have an important role as a (bridging) treatment in sUr-responsive patients for tophi clearance in severe chronic refractory gout.
Multicenter Feasibility Study of Tumor Molecular Profiling to Inform Therapeutic Decisions in Advanced Pediatric Solid Tumors (2016)

clinicaltrials.gov Identifier: NCT01853345.
Preparation and characterization of graphene‐agar and graphene oxide‐agar composites (2017)

ABSTRACT Biodegradable counterparts of petro plastics for packaging applications are highly desired due to environmental considerations. Agar can be a potential material due to its availability and biodegradability. However, moderate mechanical strength and thermal stability, in addition to poor resistance against water, needs to be addressed before agar can be commercially implemented as packaging material. As a step toward this objective, graphene oxide (GO) and reduced GO (RGO) were incorporated in agar and were solution casted in the form of films. The tensile strength was increased by 118.4% and 69.4% at 2% GO and 2% RGO loading, respectively. Higher interfacial bonding between GO and agar compared to that of RGO and agar was attributed for the observed mechanical properties. Resistance to swelling and hydrophobicity (contact angle) of the composite were improved as well when compared to pure agar. The tensile strength and the contact angle values were however, decreased after the addition of 2% GO and 2% RGO. The morphological investigation showed that the formation of pores at higher concentration of reinforcement was the contributing factor for the decrease in tensile strength. No significant change in thermal properties was observed. The transmittance value was reduced to 0% after the incorporation of GO and RGO. © 2017 Wiley Periodicals, Inc. J. Appl. Polym. Sci. 2017 , 134 , 45085.
Metabolic engineering of poly(3‐hydroxybutyrate‐ co ‐3‐hydroxyvalerate) composition in recombinant Salmonella enterica serovar typhimurium (2001)

A recombinant strain of Salmonella enterica serovar Typhimurium (mutant in propionate-activation activity) was metabolically engineered to control the composition of poly(3-hydroxybutyrate-co-3-hydroxy- valerate) (PHBV), a polyhydroxyalkanoate copolymer with commercially desirable properties. A gene (prpE) encoding propionyl-CoA synthetase was placed under the control of the IPTG-inducible taclacUV5 promoter (P(taclacUV5)) while the polyhydroxyalkanoate synthesis operon (phaBCA) from Acinetobacter sp. RA3849 was coexpressed under the control of the arabinose-inducible araBAD promoter (P(BAD)). S. enterica, harboring both constructs, was grown in medium containing a fixed substrate concentration and the composition of the copolymer was varied between 2 mol% and 25 mol% 3-hydroxyvalerate by controlling the IPTG level in the medium. This "dial-a-composition" system should find application in cases where the substrate concentration of a feedstream for PHBV bioplastic production is not adjustable.
REDUCTION OF ORGANIC COMPOUNDS WITH LOW-VALENT NIOBIUM (NbCl5/NaAlH4) (1982)

Abstract Carbonyl compounds have been deoxygenatively dimerized to alkenes with the title reagent. Deoxygenation of epoxides to alkenes, reductive coupling of allylic and benzylic alcohols to hydrocarbons, and reduction of alkynes to alkenes are also described.
Hematopoietic Stem and Progenitor Cells: Clinical and Preclinical Regeneration of the Hematolymphoid System (2002)

A vast literature exists on the biology of blood formation and regeneration under experimental and clinical conditions. The field of hematopoiesis was recently advanced by the capacity to purify to homogeneity primitive hematopoietic stem and progenitor cells. Isolation of cells at defined maturational stages has enhanced the understanding of the fundamental nature of stem cells, including how cell fate decisions are made, and this understanding is relevant to the development of other normal as well as malignant tissues. This review updates the basic biology of hematopoietic stem cells (HSC) and progenitors, the evolving use of purified HSC as grafts for clinical hematopoietic cell transplantation (HCT) including immune tolerance induction, and the application of HSC biology to other stem cell fields.
Safety and Toxicology of Magnolol and Honokiol (2018)

<i>Magnolia officinalis</i> and <i>Magnolia obovata</i> bark extracts have been used for thousands of years in Chinese and Japanese traditional medicines and are still widely employed as herbal preparations for their sedative, antioxidant, anti-inflammatory, antibiotic, and antispastic effects. Neolignans, particularly magnolol and honokiol, are the main substances responsible for the beneficial properties of the magnolia bark extract (MBE). The content of magnolol and honokiol in MBE depends on different factors, including the <i>Magnolia</i> plant species, the area of origin, the part of the plant employed, and the method used to prepare the extract. The biological and pharmacological activities of magnolol and honokiol have been extensively investigated. Here we review the safety and toxicological properties of magnolol and honokiol as pure substances or as components of concentrated MBE, including the potential side-effects in humans after oral intake. <i>In vitro</i> and <i>in vivo</i> genotoxicity studies indicated that concentrated MBE has no mutagenic and genotoxic potential, while a subchronic study performed according to OECD (Organisation for Economic Co-operation and Development) guidelines established a no adverse effect level for concentrated MBE > 240 mg/kg b.w/d. Similar to other dietary polyphenols, magnolol and honokiol are subject to glucuronidation, and despite a relatively quick clearance, an interaction with pharmaceutical active principles or other herbal constituents cannot be excluded. However, intervention trials employing concentrated MBE for up to 1 y did not report adverse effects. In conclusion, over the recent years different food safety authorities evaluated magnolol and honokiol and considered them safe.
High-performance GaAs polarized electron source for use in inverse photoemission spectroscopy (1988)

The design and operating properties of a GaAs polarized electron source are presented. An electron optical system is described that passes more than 80% of the emitted electrons at 10 μA to the target under low-energy (7–20 eV) parallel beam conditions. Laser excitation can give rise to abnormal energy distributions of the photoemitted electron beam. The existence of longitudinal modes gives a possible explanation for this behavior, which can be avoided using a mode stabilized light source. The overall performance of the polarized electron source is demonstrated by inverse photoemission spectra from Ni(110).
ViSQOL: an objective speech quality model (2015)

This paper presents an objective speech quality model, ViSQOL, the Virtual Speech Quality Objective Listener. It is a signal-based, full-reference, intrusive metric that models human speech quality perception using a spectro-temporal measure of similarity between a reference and a test speech signal. The metric has been particularly designed to be robust for quality issues associated with Voice over IP (VoIP) transmission. This paper describes the algorithm and compares the quality predictions with the ITU-T standard metrics PESQ and POLQA for common problems in VoIP: clock drift, associated time warping, and playout delays. The results indicate that ViSQOL and POLQA significantly outperform PESQ, with ViSQOL competing well with POLQA. An extensive benchmarking against PESQ, POLQA, and simpler distance metrics using three speech corpora (NOIZEUS and E4 and the ITU-T P.Sup. 23 database) is also presented. These experiments benchmark the performance for a wide range of quality impairments, including VoIP degradations, a variety of background noise types, speech enhancement methods, and SNR levels. The results and subsequent analysis show that both ViSQOL and POLQA have some performance weaknesses and under-predict perceived quality in certain VoIP conditions. Both have a wider application and robustness to conditions than PESQ or more trivial distance metrics. ViSQOL is shown to offer a useful alternative to POLQA in predicting speech quality in VoIP scenarios.
EEG source localization: A neural network approach (2001)

Functional activity in the brain is associated with the generation of currents and resultant voltages which may be observed on the scalp as the electroencephelogram. The current sources may be modeled as dipoles. The properties of the current dipole sources may be studied by solving either the forward or inverse problems. The forward problem utilizes a volume conductor model for the head, in which the potentials on the conductor surface are computed based on an assumed current dipole at an arbitrary location, orientation, and strength. In the inverse problem, on the other hand, a current dipole, or a group of dipoles, is identified based on the observed EEG. Both the forward and inverse problems are typically solved by numerical procedures, such as a boundary element method and an optimization algorithm. These approaches are highly time-consuming and unsuitable for the rapid evaluation of brain function. In this paper we present a different approach to these problems based on machine learning. We solve both problems using artificial neural networks which are trained off-line using back-propagation techniques to learn the complex source-potential relationships of head volume conduction. Once trained, these networks are able to generalize their knowledge to localize functional activity within the brain in a computationally efficient manner.
Gut intraepithelial lymphocytes induce immunity against Cryptosporidium infection through a mechanism involving gamma interferon production (1997)

Immunological control of infection with cryptosporidia in mice is dependent on CD4+ T cells and the production of gamma interferon (IFN-gamma), but to date, the mucosal T cells which produce IFN-gamma local to the infection have not been characterized. We previously showed that immunity against the gastric parasite Cryptosporidium muris could be adoptively transferred to adult SCID (severe combined immunodeficiency) mice with small intestinal intraepithelial lymphocytes (IEL) from previously infected immunocompetent mice, but only if the donor CD4+ T cells were intact. The present investigation examined whether IFN-gamma was important in the effector mechanisms mediated by immune IEL in SCID mice. The development of resistance against C. muris infection in SCID mice given immune IEL was prevented by treatment with a hamster anti-mouse IFN-gamma-neutralizing monoclonal antibody, but following cessation of antibody treatment, the mice recovered from infection. In further experiments, an enzyme-linked immunospot (ELISPOT) technique was used to compare frequencies of IFN-gamma-producing cells in activated T-cell populations from C. muris-immune and naive donor mice. Stimulation with concanavalin A or a rat anti-mouse CD3 monoclonal antibody resulted in detection of greater numbers of cells producing IFN-gamma from immune than naive IEL populations. Small numbers of IEL from C. muris-immune mice, but not from naive mice, also produced IFN-gamma when cultured with soluble oocyst antigen, but this occurred only if gamma-irradiated spleen cells were cocultured with the immune IEL. These results suggested that IEL were important in the generation of immunity to Cryptosporidium and that one of their crucial functions was to produce IFN-gamma at the site of infection.
Holographic particle sizing techniques (1974)

Holography provides a method of storing the information (size and relative position) of a dynamic three-dimensional distribution of particles so that a stationary image can be produced for detailed study. The depth of field is considerably better than normal image formation. The major technique involves forming an in-line Fraunhofer hologram; this hologram is the interference pattern formed between the far field diffraction pattern of the particles and an in-line background. Off-axis holography can also be used. The basic principles of these methods are described, and practical limitations and advantages discussed. Application of the methods to fog, mist, sprays, rocket engine studies, two phase flow, bubble chamber photography, electron beam holography, etc. are reviewed.
Reduced intestinal absorption of arginine during sepsis (1995)

Experimental sepsis, induced by either cecal ligation and puncture or intraperitoneal injection of lipopolysaccharide, resulted in impaired intestinal amino acid uptake. Impaired intestinal arginine absorption may explain the lack of benefit of enteral, compared with parenteral, arginine therapy on survival from a septic insult.
TGF-β Signaling in Embryonic Stem Cell-Derived Endothelial Cells (2006)

The roles of the transforming growth factor (TGF)-beta superfamily in vasculogenesis have been implicated by the findings that mutations in genes encoding for various TGF-beta superfamily signaling components exhibit defects in vascular tissues in humans and mice. Embryonic stem cell (ESC)-derived vascular progenitor cells have been shown to differentiate into both endothelial and mural cells. We showed that members of the TGF-beta superfamily play important roles during differentiation of vascular progenitor cells derived from mouse ESC. TGF-beta inhibited proliferation and sheet formation of ESC-derived endothelial cells. Interestingly, SB-431542, a synthetic molecule that inhibits the kinases of receptors for TGF-beta and activin, facilitated proliferation and sheet formation of ESC-derived endothelial cells. We also found that stimulation of ESC-derived endothelial cells with TGF-beta resulted in phosphorylation of both Smad2 and Smadl/5; BMP induced phosphorylation of Smad1/5. In this chapter, we present how to study the cellular and biochemical effects of TGF-beta signals on endothelial cells derived from mouse ESCs.
An EPC Gen 2 compatible passive/semi-active UHF RFID transponder with embedded FeRAM and temperature sensor (2007)

A fully integrated passive and battery powered semi-active UHF RFID transponder chip supporting EPC Gen 2 protocol is presented. The proposed transponder works as a passive RFID tag when the generated RF-power is sufficient to operate, otherwise it operates in semi-active mode using battery power. The chip has re-writeable non-volatile memory bank formed by FeRAM and on-chip temperature sensor. The memory consists of EPC memory bank for EPC functionality and temperature bank for storing sensed data. The standby current in semi-active is about 0.5 muA, the lifetime in semi-active mode is in excess of 2 year with a 10 mA-hr thin film battery.
Phase I-II Trial of Erythropoietin in the Treatment of Cisplatin-Associated Anemia (1992)

We are conducting a phase III trial to determine the effect of epoetin on transfusion requirements in patients undergoing chemotherapy.
Focused ion beam applications to solid state devices (1996)

The current state of focused ion beam (FIB) applications in relation to solid state devices is reviewed, and recent use of FIB technology for lithography, etching, deposition, and doping are described. Etching and deposition have become essential processes for failure analysis and for mask repair in silicon ULSL production. Furthermore, the FIB doping technique has been used to fabricate quantum effect devices.
Sulfhydryl Oxidation, Not Disulfide Isomerization, Is the Principal Function of Protein Disulfide Isomerase in Yeast Saccharomyces cerevisiae (2004)

Protein disulfide isomerase (PDI) is an essential protein folding assistant of the eukaryotic endoplasmic reticulum that catalyzes both the formation of disulfides during protein folding (oxidase activity) and the isomerization of disulfides that may form incorrectly (isomerase activity). Catalysis of thiol-disulfide exchange by PDI is required for cell viability in Saccharomyces cerevisiae, but there has been some uncertainty as to whether the essential role of PDI in the cell is oxidase or isomerase. We have studied the ability of PDI constructs with high oxidase activity and very low isomerase activity to complement the chromosomal deletion of PDI1 in S. cerevisiae. A single catalytic domain of yeast PDI (PDIa') has 50% of the oxidase activity but only 5% of the isomerase activity of wild-type PDI in vitro. Titrating the expression of PDI using the inducible/repressible GAL1-10 promoter shows that the amount of wild-type PDI protein needed to sustain a normal growth rate is 60% or more of the amount normally expressed from the PDI1 chromosomal location. A single catalytic domain (PDIa') is needed in molar amounts that are approximately twice as high as those required for wild-type PDI, which contains two catalytic domains. This comparison suggests that high (>60%) PDI oxidase activity is critical to yeast growth and viability, whereas less than 6% of its isomerase activity is needed.
Isolation and characterization of the precursor of type M collagen (1984)

A 225000-Mr peptide has been purified from rat chondrosarcoma which is immunologically and biochemically related to type M collagen. Rotary shadowing shows this molecule to be twice the length of the type M molecule and has a prominent kink close to one end. We believe this molecule represents parent type M, the form of the molecule in vivo.