gebhart/patrepeval huggingface dataset:
Increased primary tumor growth in mice null for β3- or β3/β5-integrins or selectins (2004)

Expression of alphavbeta3- or alphavbeta5-integrins and selectins is widespread on blood cells and endothelial cells. Here we report that human tumor cells injected s.c. into mice lacking beta3- or beta3/beta5-integrins or various selectins show enhanced tumor growth compared with growth in control mice. There was increased angiogenesis in mice lacking beta3-integrins, but no difference in structure of the vessels was observed by histology or by staining for NG2 and smooth muscle actin in pericytes. Bone marrow transplants suggest that the absence of beta3-integrins on bone marrow-derived host cells contributes to the enhanced tumor growth in beta3-null mice, although few, if any, bone marrow-derived endothelial cells were found in the tumor vasculature. Tumor growth also was affected by bone marrow-derived cells in mice lacking any one or all three selectins, implicating both leukocyte and endothelial selectins in tumor suppression. Reduced infiltration of macrophages was observed in tumors grown in mice lacking either beta3-integrins or selectins. These results implicate cells of the innate immune system, macrophages or perhaps natural killer cells, in each case dependent on integrins and selectins, in tumor suppression.
Neutrophil Isolation Protocol (2008)

Neutrophil polymorphonuclear granulocytes (PMN) are the most abundant leukocytes in humans and among the first cells to arrive on the site of inflammatory immune response. Due to their key role in inflammation, neutrophil functions such as locomotion, cytokine production, phagocytosis, and tumor cell combat are extensively studied. To characterize the specific functions of neutrophils, a clean, fast, and reliable method of separating them from other blood cells is desirable for in vitro studies, especially since neutrophils are short-lived and should be used within 2-4 hours of collection. Here, we demonstrate a standard density gradient separation method to isolate human neutrophils from whole blood using commercially available separation media that is a mixture of sodium metrizoate and Dextran 500. The procedure consists of layering whole blood over the density gradient medium, centrifugation, separation of neutrophil layer, and lysis of residual erythrocytes. Cells are then washed, counted, and resuspended in buffer to desired concentration. When performed correctly, this method has been shown to yield samples of >95% neutrophils with >95% viability.
Evidence from the anti-idiotypic network that the acetylcholine receptor is a rabies virus receptor (1993)

We have developed idiotype-anti-idiotype monoclonal antibodies that provide evidence for rabies virus binding to the acetylcholine receptor (AChR). Hybridoma cell lines 7.12 and 7.25 resulted after fusion of NS-1 myeloma cells with spleen cells from a BALB/c mouse immunized with rabies virus strain CVS. Antibody 7.12 reacted with viral glycoprotein and neutralized virus infectivity in vivo. It also neutralized infectivity in vitro when PC12 cells, which express neuronal AChR, but not CER cells or neuroblastoma cells (clone N18), which have no AChR, were used. Antibody 7.25 reacted with nucleocapsid protein. Anti-idiotypic monoclonal antibody B9 was produced from fusion of NS-1 cells with spleen cells from a mouse immunized with 7.12 Fab. In an enzyme-linked immunosorbent assay and immunoprecipitation, B9 reacted with 7.12, polyclonal rabies virus immune dog serum, and purified AChR. The binding of B9 to 7.12 and immune dog serum was inhibited by AChR. B9 also inhibited the binding of 7.12 to rabies virus both in vitro and in vivo. Indirect immunofluorescence revealed that B9 reacted at neuromuscular junctions of mouse tissue. B9 also reacted in indirect immunofluorescence with distinct neurons in mouse and monkey brain tissue as well as with PC12 cells. B9 staining of neuronal elements in brain tissue of rabies virus-infected mice was greatly reduced. Rabies virus inhibited the binding of B9 to PC12 cells. Mice immunized with B9 developed low-titer rabies virus-neutralizing antibody. These mice were protected from lethal intramuscular rabies virus challenge. In contrast, anti-idiotypic antibody raised against nucleocapsid antibody 7.25 did not react with AChR.
A Gold Nanoparticle‐Based Aptamer Target Binding Readout for ATP Assay (2007)

A gold nanoparticle-based detection strategy for ATP assays. In the absence of ATP, gold nanoparticles are not stabilized by the rigid duplex, thus they are readily aggregated by salt (solution displaying blue colors); in contrast ATP induces a duplex-to-aptamer structural switching, liberating a random coil-like ssDNA. Gold nanoparticles are stabilized by the liberated ssDNA, showing high resistance to salt-induced aggregation (solution staying in red). Supporting information for this article is available on the WWW under http://www.wiley-vch.de/contents/jc_2089/2007/c2256_s.pdf or from the author. Please note: The publisher is not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing content) should be directed to the corresponding author for the article.
Disilanyl‐amines — compounds comprising the structural unit SiSiN, as single‐source precursors for plasma‐enhanced chemical vapour deposition (PE‐CVD) of silicon nitride (1993)

Abstract As potential single‐source precursors for the plasma‐enhanced chemical vapour deposition of silicon nitride, a series of disilanyl‐amines has been prepared containing the structural unit SiSiN. Hexachlorodisilane reacts with Et 2 NH to yield (Et 2 N)Cl 2 SiSiCl 2 (NEt 2 ), 1 , and (Et 2 N) 2 ClSiSiCl(NEt 2 ) 2 , 2 , while with ( i ‐Pr) 2 NH the compounds [( i ‐Pr) 2 N]Cl 2 SiSiCl 3 , 3 , and [( i ‐Pr) 2 N]Cl 2 SiSiCl 2 [N( i ‐Pr) 2 ] 2 , 4 , are formed as colourless, stable liquids ( 1 – 3 ) or solids ( 4 ). The crystal structure of 4 has been determined. The molecule shows a staggered gauche conformation (dihedral angle NSiSiN 71°, SiSi 1.670 Å). Compounds 2 – 4 are converted into the corresponding hydrides 6 – 8 in good yields by reaction with LiAlH 4 in monoglyme, while 1 is undergoing an isomerization to give 1,1 ‐bis(diethylamino)disilane ( 5 ) in this process. The disilanes 5 – 8 are colourless liquids, not spontaneously inflammable in air. 1,2‐ B is(di‐ i ‐ p ropylamino)disilane (BIPADS), 8 , was chosen for down‐stream mode PE‐CVD of silicon nitride. With substrate temperatures at 300°C, high quality thin films were obtained at high growth rates. These films show refraction indices of 1.631 – 1.814 and have low carbon and very low oxygen contents, but high (Si‐bound) hydrogen contents. Good insulating properties and good resistance to aqueous alkaline etching are further characteristics which could make BIPADS‐generated films an attractive alternative to conventional plasmanitride materials. BIPADS is easy to handle and reduces the hazards usually associated with standard silane precursors.
Phenotypic resistance to thrombin-induced platelet microbicidal protein in vitro is correlated with enhanced virulence in experimental endocarditis due to Staphylococcus aureus (1997)

Thrombin-induced platelet microbicidal protein (tPMP) is secreted by rabbit platelets following thrombin stimulation, and it kills common endovascular pathogens in vitro, including Staphylococcus aureus. Therefore, pathogens which exhibit tPMP resistance in vitro possess a potential survival advantage in vivo at sites of endovascular damage. We generated an isogenic S. aureus strain pair, differing in tPMP susceptibility, by transposon (Tn551) mutagenesis of a tPMP-susceptible (tPMPs) parental strain (ISP479) to derive a stably tPMP-resistant (tPMPr) strain, ISP479R. ISP479 and ISP479R were equivalent in vitro in the following phenotypes: biotyping, antiobiograms, platelet adherence and aggregation, growth kinetics, cell wall-associated protein A expression, and fibrinogen binding. Genotypic comparisons of chromosomal DNA of strains ISP479 and ISP479R following restriction endonuclease digestion revealed indistinguishable pulsed-field gel electrophoretic patterns. The genotype exhibited by strain ISP479R was linked to the tPMP-resistant phenotype, as it was transducible into the initially tPMP-susceptible parental strain, ISP479. Southern hybridization verified the presence of a single copy of Tn551 in the same chromosomal restriction site of both ISP479R and tPMPr transductants of ISP479. The correlation of in vitro tPMP susceptibility phenotypes with the ability to induce experimental endocarditis (a prototypical endovascular infection) was evaluated. Despite equivalent rates of endocarditis induction, animals infected with strain ISP479R achieved significantly higher vegetation bacterial densities over a 7-day post-challenge period than did animals infected with strain ISP479. These data suggest that tPMPr microbial strains have a selective advantage in experimental staphylococcal endocarditis. Furthermore, the major impact of tPMP resistance upon endocarditis pathogenesis appears to involve a postvalvular adherence event(s), most probably by facilitating bacterial proliferation within vegetations.
Effect of tocilizumab on haematological markers implicates interleukin-6 signalling in the anaemia of rheumatoid arthritis (2013)

Inflammatory anaemia improves in patients with RA treated with tocilizumab. This improvement correlates with the degree of suppression of systemic inflammation, reduction in hepcidin and haptoglobin and increase in iron-binding capacity. These clinical data provide evidence of a role for IL-6 signalling in the inflammatory anaemia of RA.
Submicron transferred-substrate heterojunction bipolar transistors (1999)

We report submicron transferred-substrate AlInAs/GaInAs heterojunction bipolar transistors (HBT's). Devices with 0.4-μm emitter and 0.4-μm collector widths have 17.5 dB unilateral gain at 110 GHz. Extrapolating at -20 dB/decade, the power gain cutoff frequency f <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">max</sub> is 820 GHz. The high f <sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">max</sub> , results from the scaling of HBT's junction widths, from elimination of collector series resistance through the use of a Schottky collector contact, and from partial screening of the collector-base capacitance by the collector space charge.
Four-Electron Photochemistry of Dirhodium Fluorophosphine Compounds (1999)

The singly bonded dirhodium(II) complex, Rh2(dfpma)3Br4 (dfpma = bis(difluorophosphine)methylamine, CH3N(PF2)2), photoreacts when irradiated with UV or visible light. The mixed-valence LRh0RhΙΙX2 species, Rh2(dfpma)3Br2(L), is obtained quantitatively when THF solutions containing Rh2(dfpma)3Br4 and excess L = dfpma or PR3 are photolyzed (λexc > 436 nm). The photoreaction quantum yield is ∼10-2 over the near-UV absorption manifold, decreasing slightly as the excitation wavelength is extended into the visible region (φp313-405 = 0.022(3), φp436-468 = 0.012(1)). Continued irradiation with excitation wavelengths coincident with the absorption manifold of the LRh0RhΙΙX2 complex results in a second two-electron elimination reaction to give the LRh0Rh0L dimer, Rh2(dfpma)3L2, again in quantitative yield but with an attenuated quantum efficiency (φp313-365 = 0.0035(3), φp405-436 = 0.0017(3)). For photoreactions performed in THF, the bromine photoproduct is HBr, which may be trapped with 2,6-lutidine. NMR experiments reveal the production of 2 equiv of HBr for each two-electron transformation of the dirhodium photoreagent. The wavelength dependence of φp and the results of extended Hückel calculations are consistent with the photoreaction occurring from an excited state of dσ* parentage. The ability to preserve the same dσ* electronic structure across the four-electron series allows us to overcome the barriers traditionally associated with metal−halogen bond cleavage and consequently to design a four-electron photoreaction among discrete molecular species.
Optimizing Fracture Spacing and Sequencing in Horizontal-Well Fracturing (2011)

Summary Horizontal wells with multiple fractures are now commonly used in unconventional (low-permeability) gas reservoirs. The spacing between perforations and the number and orientation of transverse fractures all have a major impact on well production. The opening of propped fractures results in the redistribution of local Earth stresses. In this paper, the extent of stress reversal and reorientation has been calculated for fractured horizontal wells using a 3D numerical model of the stress interference induced by the creation of one or more propped fractures. The results have been analyzed for their impact on simultaneous and sequential fracturing of horizontal wells. Our results demonstrate that a transverse fracture initiated from a horizontal well may deviate away from the previous fracture. The effect of the reservoir's mechanical properties on the spatial extent of stress reorientation caused by an opened crack has been quantified. The paper takes into account the presence of layers that bound the pay zone but have mechanical properties different from those of the pay zone. The fracture vertical growth into the bounding layers is also examined. It is shown that stress interference, or reorientation, increases with the number of fractures created and depends on the sequence of fracturing. Three fracturing sequences are investigated for a typical field case in the Barnett shale: (a) consecutive fracturing, (b) alternative fracturing, and (c) simultaneous fracturing of adjacent wells. The numerical calculation of the fracture spacing required to avoid fracture deviation during propagation, for all three fracturing techniques, demonstrates the potential advantages of alternate fracture sequencing and zipper fracs to improve the performance of stimulation treatments in horizontal wells.
Potassium nitrate through solvent separation of strong acids (1985)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTPotassium nitrate through solvent separation of strong acidsAharon Eyal, Josef Mizrahi, and Avraham BanielCite this: Ind. Eng. Chem. Process Des. Dev. 1985, 24, 2, 387–390Publication Date (Print):April 1, 1985Publication History Published online1 May 2002Published inissue 1 April 1985https://pubs.acs.org/doi/10.1021/i200029a028https://doi.org/10.1021/i200029a028research-articleACS PublicationsRequest reuse permissionsArticle Views161Altmetric-Citations6LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access options Get e-Alerts
Long-term outcome after haploidentical stem cell transplant and infusion of T cells expressing the inducible caspase 9 safety transgene (2014)

Adoptive transfer of donor-derived T lymphocytes expressing a safety switch may promote immune reconstitution in patients undergoing haploidentical hematopoietic stem cell transplant (haplo-HSCT) without the risk for uncontrolled graft versus host disease (GvHD). Thus, patients who develop GvHD after infusion of allodepleted donor-derived T cells expressing an inducible human caspase 9 (iC9) had their disease effectively controlled by a single administration of a small-molecule drug (AP1903) that dimerizes and activates the iC9 transgene. We now report the long-term follow-up of 10 patients infused with such safety switch-modified T cells. We find long-term persistence of iC9-modified (iC9-T) T cells in vivo in the absence of emerging oligoclonality and a robust immunologic benefit, mediated initially by the infused cells themselves and subsequently by an apparently accelerated reconstitution of endogenous naive T lymphocytes. As a consequence, these patients have immediate and sustained protection from major pathogens, including cytomegalovirus, adenovirus, BK virus, and Epstein-Barr virus in the absence of acute or chronic GvHD, supporting the beneficial effects of this approach to immune reconstitution after haplo-HSCT. This study was registered at www.clinicaltrials.gov as #NCT00710892.
Bacterial biofilms: Influence on the pathogenesis, diagnosis and treatment of urinary tract infections (1994)

The bacterial biofilm theory which describes bacterial populations in natural and pathogenic ecological systems in terms of a free-floating or 'planktonic' population of bacteria interacting with a more important matrix enclosed 'sessile' population of bacteria associated with or adherent to a surface, may help explain some of the problems linked to our understanding the nature of urinary tract infections. This paper reviews the role of bacterial biofilm formation in catheter-associated infection, prostatitis and struvite (infected stone) calculogenesis stressing, the importance of bacterial biofilms in the pathogenesis, persistence and hence the treatment of urinary tract infection.
Inhibition of tumor growth in mice by an analogue of platelet factor 4 that lacks affinity for heparin and retains potent angiostatic activity. (1991)

An analogue of human platelet factor 4 (PF4) lacking affinity for heparin was specifically designed to evaluate the importance of this property in the antitumor effects of recombinant PF4. The purified protein, recombinant PF4-241 (rPF4-241), failed to bind heparin but retained the ability to suppress the growth of tumors in mice. Daily intralesional injections of rPF4-241 significantly inhibited the growth of the B-16 melanoma in syngeneic mice without direct inhibitory effects on B-16 cell growth in vitro. Similar antitumor effects were observed with the human colon carcinoma, HCT-116, grown in nude mice, indicating that the inhibitory activity was neither tumor-type specific nor T-cell dependent. rPF4-241 inhibited endothelial cell proliferation in vitro with dose dependence similar to the native sequence rPF4. Both rPF4 and rPF4-241 inhibited angiogenesis in the chicken chorioallantoic membrane. The analogue, however, was inhibitory at lower concentrations than rPF4 in the chorioallantoic membrane system and its inhibitory effects were not abrogated by the presence of heparin. The present findings support the conclusion that both rPF4 and rPF4-241 inhibit tumor growth by suppression of tumor-induced neovascularization. The finding that this activity is independent of heparin binding may allow the development of PF4-based angiostatic agents with reduced toxicity and improved bioavailability. These results also suggest that PF4 may play a more specific role in modulation of blood vessel development than previously recognized.
Structure and expression of a novel frizzled gene isolated from the developing mouse gut (2000)

The Wnt/APC (adenomatous polyposis coli)/beta-catenin pathway plays a central role in the pathogenesis of colorectal cancer and probably also in normal development of the gastrointestinal tract. Frizzled proteins function as cell-surface receptors for the Wnt family of extracellular ligands. Many components of the Wnt signalling pathway are expressed widely, and determinants of tissue-specific functions are poorly understood. A better understanding of how Wnt signalling regulates tissue-specific development and gut epithelial homoeostasis requires characterization of the many components of this signalling pathway. We therefore wished to identify frizzled genes with limited tissue distribution of expression and isolated Mfz10, a novel member of the mouse family of frizzled genes, from the developing fetal gut. Highest levels of Mfz10 mRNA are detected throughout late embryonic development, in the brain, heart, lung and digestive tract. In adult mice Mfz10 mRNA is detected at highest levels in the heart, brain and lung. Expression in the adult gastrointestinal tract is much weaker, with higher levels in foregut derivatives (oesophagus and stomach) compared with regions derived from the fetal midgut and hindgut; particularly strong mRNA expression is observed in the squamous epithelium of the oesophagus. The amino acid sequence of Mfz10 is nearly identical to that of human FzE2 (also known as FzD2). Interestingly, mRNA levels of human FzD2 are reported to be up-regulated in oesophageal squamous cell carcinomas. These findings suggest a likely role for Mfz10 in the developing and adult foregut.
Paper Diagnostic for Instantaneous Blood Typing (2010)

Agglutinated blood transports differently onto paper than stable blood with well dispersed red cells. This difference was investigated to develop instantaneous blood typing tests using specific antibody-antigen interactions to trigger blood agglutination. Two series of experiments were performed. The first related the level of agglutination and the fluidic properties of blood on its transport in paper. Blood samples were mixed at different ratios with specific and nonspecific antibodies; a droplet of each mixture was deposited onto a filter paper strip, and the kinetics of wicking and red cell separation were measured. Agglutinated blood phase separated, with the red blood cells (RBC) forming a distinct spot upon contact with paper while the plasma wicked; in contrast, stable blood suspensions wicked uniformly. The second study analyzed the wicking and the chromatographic separation of droplets of blood deposited onto paper strips pretreated with specific and nonspecific antibodies. Drastic differences in transport occurred. Blood agglutinated by interaction with one of its specific antibodies phase separated, causing a chromatographic separation. The red cells wicked very little while the plasma wicked at a faster rate than the original blood sample. Blood agglutination and wicking in paper followed the concepts of colloids chemistry. The immunoglobin M antibodies agglutinated the red blood cells by polymer bridging, upon selective adsorption on the specific antigen at their surface. The transport kinetics was viscosity controlled, with the viscosity of red cells drastically increasing upon blood agglutination. Three arm prototypes were investigated for single-step blood typing.
Choice of Breastfeeding and Physicians' Advice: A Cohort Study of Women Receiving Propylthiouracil (2000)

A substantial proportion of the lactating patients on PTU still receive advice against breastfeeding from their physicians. Physicians' advice and attitudes toward breastfeeding during PTU therapy are a major factor in women's final decision to breastfeed. Physicians' compliance with evidence-based data will facilitate breastfeeding in this group.propylthiouracil, breastfeeding, decision-making.