gebhart/patrepeval huggingface dataset:
Polymerization of N‐(p‐aminobenzoyl)caprolactam: Block and alternating copolymers of aromatic and aliphatic polyamides (1987)

Abstract The polymerization behavior of N ‐( p ‐aminobenzoyl)caprolactam was studied. It was found that polymerization could proceed by either elimination of caprolactam or by ring opening. Polymers prepared at temperatures above 200°C showed a greater tendency for ring opening to produce alternating aromatic/aliphatic copolymers than did polymers prepared at lower temperatures. Block copolymers of poly( p ‐benzamide) and nylon 6 were prepared by a two‐stage hydrolytic polymerization process or by anionic polymerization at temperatures &gt; 200°C. Polymer microstructures were determined using 13 C‐NMR spectroscopy by comparison with homopolymers and model alternating copolymers. The alternating copolymer prepared by condensation of N ‐( p ‐aminobenzoyl)‐6‐caproic acid showed a melting transition at 300–305°C in the DSC and a T g in subsequent heating cycles of 116–119°C. Copolymers made with the two‐stage process were rich in p ‐benzamide sequences and showed no T g or T m below 400°C. Copolymer made with NaH was rich in nylon 6 units, showed a T m of 175–180°C and a T g of 80–81°C, and was homogeneous in both the melt and solid.
Magnet power supply as a network object (2002)

Magnet power supplies with embedded microprocessor controls are being installed in the beam-lines of the linear accelerator and proton storage ring at the Los Alamos Meson Physics Facility (LAMPF). Using an RS422 link they communicate with the accelerator control system through a terminal server connected to the site-wide DECnet backbone. Each supply is, for all intents and purposes, a network object. The controller has a command set of over seventy-five three-character ASCII control and readback instructions. Strategies for choosing the appropriate control protocol and the process of integrating these devices into a large accelerator control system are presented.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">&gt;</ETX>
4-1BB Is Superior to CD28 Costimulation for Generating CD8+ Cytotoxic Lymphocytes for Adoptive Immunotherapy (2007)

Artificial APCs (aAPCs) genetically modified to express selective costimulatory molecules provide a reproducible, cost-effective, and convenient method for polyclonal and Ag-specific expansion of human T cells for adoptive immunotherapy. Among the variety of aAPCs that have been studied, acellular beads expressing anti-CD3/anti-CD28 efficiently expand CD4+ cells, but not CD8+ T cells. Cell-based aAPCs can effectively expand cytolytic CD8+ cells, but optimal costimulatory signals have not been defined. 4-1BB, a costimulatory molecule expressed by a minority of resting CD8+ T cells, is transiently up-regulated by all CD8+ T cells following activation. We compared expansion of human cytolytic CD8+ T cells using cell-based aAPCs providing costimulation via 4-1BB vs CD28. Whereas anti-CD3/anti-CD28 aAPCs mostly expand naive cells, anti-CD3/4-1BBL aAPCs preferentially expand memory cells, resulting in superior enrichment of Ag-reactive T cells which recognize previously primed Ags and efficient expansion of electronically sorted CD8+ populations reactive toward viral or self-Ags. Using HLA-A2-Fc fusion proteins linked to 4-1BBL aAPCs, 3-log expansion of Ag-specific CD8+ CTL was induced over 14 days, whereas similar Ag-specific CD8+ T cell expansion did not occur using HLA-A2-Fc/anti-CD28 aAPCs. Furthermore, when compared with cytolytic T cells expanded using CD28 costimulation, CTL expanded using 4-1BB costimulation mediate enhanced cytolytic capacity due, in part, to NKG2D up-regulation. These results demonstrate that 4-1BB costimulation is essential for expanding memory CD8+ T cells ex vivo and is superior to CD28 costimulation for generating Ag-specific products for adoptive cell therapy.
Electrically Tunable Selective Reflection of Light from Ultraviolet to Visible and Infrared by Heliconical Cholesterics (2015)

Electrical tuning of selective reflection of light is achieved in a very broad spectral range from ultraviolet to visible and infrared by an oblique helicoidal state of a cholesteric liquid crystal in a wide temperature range (including room temperature). The phenomenon offers potential applications in tunable smart windows, lasers, optical filters and limiters, as well as in displays.
Effect of an arbitrary dissipative circuit on the quantum energy levels and tunneling of a Josephson junction (1986)

The complex energy shifts of the energy levels of a macroscopic system subject to dissipation are calculated as a function of the phenomenological damping parameters describing the classical motion of the system. These results are applied to the energy levels of the zero-voltage state of a current-biased Josephson junction in parallel with an arbitrary dissipative circuit. Following the approach of Leggett, the influence of the same dissipative circuit on the tunneling rate out of the zero-voltage state is also calculated. The dependences of both phenomena, quantization of energy levels, and quantum tunneling, on the admittance of the circuit are compared.
Thalidomide induces imbalances in T-lymphocyte sub-populations in the circulating blood of healthy males (1985)

Lepromatous leprosy patients experiencing erythema nodosum lepro sum ( ENL) have been reported to have an increase in the ratio of circulating T -helper to T -suppressor cells (H : S ratio). Thalidomide is an effective drug in the management of ENL. To determine if thalidomide affected cells of the immunoregulatory system, B cells, T cells, T-suppressor cells, T-helper and natural killer cells in the blood of the healthy males were enumerated. Thalidomide induced a decrease in the T-helper to T-suppressor cell ratio. The decrease was due to a significant reduction in the percentage and absolute number ofT-helper cells and an apparent increase in the percentage and absolute number of T-suppressor cells. B cells and natural killer cells were not affected .
Interleukin‐17 up‐regulation of nitric oxide production in human osteoarthritis cartilage (1997)

IL-17 augments nitric oxide production in OA cartilage via nuclear factor kappaB activation, but independently of IL-1beta signaling.
Active Learning for Interactive Multimedia Retrieval (2008)

As the first decade of the 21st century comes to a close, growth in multimedia delivery infrastructure and public demand for applications built on this backbone are converging like never before. The push towards reaching truly interactive multimedia technologies becomes stronger as our media consumption paradigms continue to change. In this paper, we profile a technology leading the way in this revolution: active learning. Active learning is a strategy that helps alleviate challenges inherent in multimedia information retrieval through user interaction. We show how active learning is ideally suited for the multimedia information retrieval problem by giving an overview of the paradigm and component technologies used with special attention given to the application scenarios in which these technologies are useful. Finally, we give insight into the future of this growing field and how it fits into the larger context of multimedia information retrieval.
Pulmonary fibrosis: patterns and perpetrators (2012)

Pulmonary fibrosis occurs in a variety of clinical settings, constitutes a major cause of morbidity and mortality, and represents an enormous unmet medical need. However, the disease is heterogeneous, and the failure to accurately discern between forms of fibrosing lung diseases leads to inaccurate treatments. Pulmonary fibrosis occurring in the context of connective tissue diseases is often characterized by a distinct pattern of tissue pathology and may be amenable to immunosuppressive therapies. In contrast, idiopathic pulmonary fibrosis (IPF) is a progressive and lethal form of fibrosing lung disease that is recalcitrant to therapies that target the immune system. Although animal models of fibrosis imperfectly recapitulate IPF, they have yielded numerous targets for therapeutic intervention. Understanding the heterogeneity of these diseases and elucidating the final common pathways of fibrogenesis are critical for the development of efficacious therapies for severe fibrosing lung diseases.
The amazing osteocyte (2010)

The last decade has provided a virtual explosion of data on the molecular biology and function of osteocytes. Far from being the "passive placeholder in bone," this cell has been found to have numerous functions, such as acting as an orchestrator of bone remodeling through regulation of both osteoclast and osteoblast activity and also functioning as an endocrine cell. The osteocyte is a source of soluble factors not only to target cells on the bone surface but also to target distant organs, such as kidney, muscle, and other tissues. This cell plays a role in both phosphate metabolism and calcium availability and can remodel its perilacunar matrix. Osteocytes compose 90% to 95% of all bone cells in adult bone and are the longest lived bone cell, up to decades within their mineralized environment. As we age, these cells die, leaving behind empty lacunae that frequently micropetrose. In aged bone such as osteonecrotic bone, empty lacunae are associated with reduced remodeling. Inflammatory factors such as tumor necrosis factor and glucocorticoids used to treat inflammatory disease induce osteocyte cell death, but by different mechanisms with potentially different outcomes. Therefore, healthy, viable osteocytes are necessary for proper functionality of bone and other organs.
Suppression of in vivo growth of human cancer solid tumor xenografts by 1,25-dihydroxyvitamin D3. (1987)

It has been demonstrated previously that several human cancer cell lines possess specific, high affinity receptors for 1,25-dihydroxyvitamin D3 [1,25-(OH)2D3, calcitriol] and that 1,25-(OH)2D3 and certain of its metabolites inhibit the growth in vitro of several human breast cancer and malignant melanoma cell lines, i.e., analogous to the effect of estrogens on breast cancer. Furthermore, it has been shown that 1,25-(OH)2D3 and one of its synthetic analogues prolonged the survival in mouse leukemia, induced by inoculation of leukemic cells into syngeneic mice. However, until now no growth-inhibitory effect of 1,25-(OH)2D3 has been demonstrated in vivo for human cancer cells or for solid cancers. This paper describes the suppression by 1,25-(OH)2D3 of the growth of human cancer cell-derived xenografts in immune-suppressed mice. However, the 24-hydroxylated metabolite and the 24-difluorinated analogue of 1,25-(OH)2D3, both of which are active in vitro, were ineffective in this xenograft model system. The suppression by 1,25-(OH)2D3, which was achieved without significant toxicity, was observed with xenografts derived from two 1,25-(OH)2D3 receptor-positive cell lines (COLO 206F, derived from a colonic cancer, and COLO 239F from a malignant melanoma) but not in those from a receptor-negative line (RPMI 7932, also derived from a malignant melanoma). These studies demonstrate that pharmacological doses of 1,25-(OH)2D3 can be tolerated in the presence of a low calcium diet and that these doses can suppress the growth of human solid xenograft tumors in vivo. This is the first report of 1,25-(OH)2D3 growth suppression of solid tumors derived from human cancer cells in an in vivo model system, and it supports the hypothesized potential of the hormone in the treatment of 1,25-(OH)2D3 receptor-positive human cancers.
Identification of a Familial Hyperinsulinism-causing Mutation in the Sulfonylurea Receptor 1 That Prevents Normal Trafficking and Function of KATP Channels (2002)

Mutations in the pancreatic ATP-sensitive potassium (K(ATP)) channel subunits sulfonylurea receptor 1 (SUR1) and the inwardly rectifying potassium channel Kir6.2 cause persistent hyperinsulinemic hypoglycemia of infancy. We have identified a SUR1 mutation, L1544P, in a patient with the disease. Channels formed by co-transfection of Kir6.2 and the mutant SUR1 in COS cells have reduced response to MgADP ( approximately 10% that of the wild-type channels) and reduced surface expression ( approximately 19% that of the wild-type channels). However, the steady-state level of the SUR1 protein is unaffected. Treating cells with lysosomal or proteasomal inhibitors did not improve surface expression of the mutant channels, suggesting that increased degradation of mutant channels by either pathway is unlikely to account for the reduced surface expression. Removal of the RKR endoplasmic reticulum retention/retrieval trafficking motif in either SUR1 or Kir6.2 increased the surface expression of the mutant channel by approximately 35 and approximately 20%, respectively. The simultaneous removal of the RKR motif in both channel subunits restored surface expression of the mutant channel to the wild-type channel levels. Thus, the L1544P mutation may interfere with normal trafficking of K(ATP) channels by causing improper shielding of the RKR endoplasmic reticulum retention/retrieval trafficking signals in the two channel subunits.
Control of mesogen configuration in colloids of liquid crystalline polymers (2010)

We report on a method to chemically predetermine the surface anchoring of mesogens in liquid crystalline colloids formed by different types of dispersion polymerization, and hence to achieve control over the mesogen configuration in such colloids. The surface anchoring is controlled by the chemical linkage of the polymers forming the colloids to the surfactants stabilizing the colloids towards the dispergent. We find that the hydroxypropyl cellulose used in conventional dispersion poylmerization induces parallel mesogen surface anchoring that in turn leads to bipolar director-field configurations, while a methacrylate terminated polysiloxane stabilizer, which is used in nonpolar dispersion polymerization, induces perpendicular anchoring and because of that to radial or axial configurations, depending on the size of the synthesized colloid. These differences in surface anchoring tendencies are due to differences in the molecular structure of the LC/non-LC block copolymers formed by the mesogens and the stabilizers. Based on these observations we synthesized a novel macroinitiator able to induce bipolar director-field configurations in the nonpolar dispersion polymerization.
Personal knowledge questions for fallback authentication (2008)

Security questions (or challenge questions) are commonly used to authenticate users who have lost their passwords. We examined the password retrieval mechanisms for a number of personal banking websites, and found that many of them rely in part on security questions with serious usability and security weaknesses. We discuss patterns in the security questions we observed. We argue that today's personal security questions owe their strength to the hardness of an information-retrieval problem. However, as personal information becomes ubiquitously available online, the hardness of this problem, and security provided by such questions, will likely diminish over time. We supplement our survey of bank security questions with a small user study that supplies some context for how such questions are used in practice.
Role of molecular chaperones in neurodegenerative disorders (2005)

Many major neurodegenerative diseases, including Amyotrophic Lateral Sclerosis, Alzheimer's disease, Parkinson's disease, Huntington Disease and other polyglutamine expansion disorders, are associated with degeneration and death of specific neuronal populations due to accumulation of certain abnormal polypeptides. These misfolded species aggregate and form inclusion bodies and their neurotoxicity is associated with the aggregation. To handle a build-up of abnormal proteins cells employ a complicated machinery of molecular chaperones and various proteolytic systems. Chaperones facilitate refolding or degradation of misfolded polypeptides, prevent protein aggregation and play a role in formation of aggresome, a centrosome-associated body to which small cytoplasmic aggregates are transported. The ubiquitin-proteasome proteolytic system is critical for reducing the levels of soluble abnormal proteins, while autophagy plays the major role in clearing of cells from protein aggregates. Accumulation of the aggregation prone proteins activates signal transduction pathways that control cell death, including JNK pathway that controls viability of a cell in various models of Parkinson's and Huntington's diseases. The major chaperone Hsp72 can interfere with this signalling pathway, thus promoting survival. A very important consequence of a build-up and aggregation of misfolded proteins is impairment of the ubiquitin-proteasome degradation system and suppression of the heat shock response. Such an inhibition of the major cell defense systems may play a critical role in neurodegeneration. Here, it is suggested that these changes may reflect a senescence-like programme initiated by the aggregated abnormal polypeptides. Pathways that control the fate of misfolded proteins, for example molecular chaperones or proteolytic systems, may become interesting novel targets for therapy of neurodegenerative disorders.
The Effect of Fat Type, Carbohydrase, and Lipase Addition on Growth Performance and Nutrient Utilization of Young Broilers Fed Wheat-Based Diets (2004)

A 2 x 2 x 2 factorial experiment was conducted to evaluate the effects of fat type (beef tallow [50 g/kg diet] or canola oil [50 g/kg of diet]), carbohydrase addition (none or carbohydrases [0.4 g/kg diet]), and lipase addition (none or lipase [0.2 g/kg of diet]) on growth performance and nutrient utilization of male broilers fed a wheat-based diet from 5 to 18 d. The carbohydrase supplement contained xylanase, glucanase, cellulase, and other enzyme activities. The experimental diets were formulated to be suboptimal in major nutrients and each was fed in a mash form to 10 replicate pens of 5 broilers per pen. Body weight gain was not affected by fat type but a poorer feed/gain ratio (P < 0.001) was noted for tallow-containing diets. Regardless of fat type, carbohydrase enzyme supplementation improved (P < 0.001) BW gain and feed/gain ratio. There was no effect of lipase addition on chicken performance and nutrient utilization. When compared with canola oil, tallow-containing diets had a lower (P < 0.001) apparent fat digestibility and consequently a lower dietary AMEn content. Carbohydrase enzyme addition improved (P < 0.001) fat, starch, nitrogen, and nonstarch polysaccharide (NSP) digestibilities in the small intestine, improved AMEn, and reduced (P < 0.001) jejunal digesta viscosity in both fat types. Carbohydrase supplementation increased water-soluble (P < 0.001) and decreased water-insoluble (P < 0.001) NSP concentrations in the small intestine. The interaction between fat type and carbohydrase addition was only significant for fat digestibilities, with greater improvements seen for diets containing tallow. Significant interactions between carbohydrase addition and intestinal segment were noted for fat, starch, nitrogen, and NSP digestibilities, with the enzyme effects being greater in the jejunum than the ileum. It is evident from the present study that an appropriate carbohydrase preparation could eliminate the negative effects of soluble NSP on animal fat utilization in a wheat-based broiler diet.
The Hinge Region Regulates DNA Binding, Nuclear Translocation, and Transactivation of the Androgen Receptor (2007)

The androgen receptor (AR) encoding gene can undergo mutations during the development and treatment of prostate cancer. Even in hormone-independent stages, mutations in the receptor paradoxically seem to result in an increased AR function. Two such point mutations have been described in the part of the AR involved in DNA binding and nuclear translocation, namely the hinge region. Despite a decreased nuclear translocation, these mutant ARs display increased transactivating potencies. Through detailed analysis of the hinge region, we found that deletion of residues 629 to 636 resulted in a stronger androgen response on different reporters, although this mutant displays an extremely low in vitro affinity for androgen response elements. This superactivity is independent of nuclear localization and can be inhibited by antiandrogens. Surprisingly, the AR activation functions, AF1 and AF2, are not dramatically affected when the inhibitory region (629-RKLKKLGN-636) is deleted, although cotransfected p160 coactivator TIF2 had a stronger potentiating effect in the absence of this motif. The ligand-dependent interaction between the amino-terminal domain and the ligand-binding domain (N/C interaction) plays an important role in transactivation by the AR. We found that this interaction is strongly enhanced by deletion of the inhibitory region. In conclusion, the description of prostate cancer mutations has led to the discovery of a complex role of the hinge region in nuclear localization, DNA binding, coactivator recruitment, and N/C interaction of the AR.
A panel of human cell-based artificial APC enables the expansion of long-lived antigen-specific CD4+ T cells restricted by prevalent HLA-DR alleles (2010)

Many preclinical experiments have attested to the critical role of CD4(+) T cell help in CD8(+) cytotoxic T lymphocyte (CTL)-mediated immunity. Recent clinical trials have demonstrated that reinfusion of CD4(+) T cells can induce responses in infectious diseases and cancer. However, few standardized and versatile systems exist to expand antigen-specific CD4(+) T(h) for clinical use. K562 is a human erythroleukemic cell line, which lacks expression of HLA class I and class II, invariant chain and HLA-DM but expresses adhesion molecules such as intercellular adhesion molecule-1 and leukocyte function-associated antigen-3. With this unique immunologic phenotype, K562 has been tested in clinical trials of cancer immunotherapy. Previously, we created a K562-based artificial antigen-presenting cell (aAPC) that generates ex vivo long-lived HLA-A2-restricted CD8(+) CTL with a central/effector memory phenotype armed with potent effector function. We successfully generated a clinical version of this aAPC and conducted a clinical trial where large numbers of anti-tumor CTL are reinfused to cancer patients. In this article, we shifted focus to CD4(+) T cells and developed a panel of novel K562-derived aAPC, where each expresses a different single HLA-DR allele, invariant chain, HLA-DM, CD80, CD83 and CD64; takes up soluble protein by endocytosis and processes and presents CD4(+) T-cell peptides. Using this aAPC, we were able to determine novel DR-restricted CD4(+) T-cell epitopes and expand long-lived CD4(+) T-cells specific for multiple antigens without growing bystander Foxp3(+) regulatory T cells. Our results suggest that K562-based aAPC may serve as a translatable platform to generate both antigen-specific CD8(+) CTL and CD4(+) T(h).
Autoimmune hair loss (alopecia areata) transferred by T lymphocytes to human scalp explants on SCID mice. (1998)

Alopecia areata is a tissue-restricted autoimmune disease of the hair follicle, which results in hair loss and baldness. It is often psychologically devastating. The role of T lymphocytes in this disorder was investigated with cell transfer experiments. Scalp explants from patients were transplanted to severe combined immunodeficiency (SCID) mice and injected with autologous T lymphocytes isolated from involved scalp. T lymphocytes which had been cultured with hair follicle homogenate along with antigen-presenting cells were capable of inducing the changes of alopecia areata, including hair loss and perifollicular infiltrates of T cells, along with HLA-DR and ICAM-1 expression of the follicular epithelium. Similar changes were not noted in grafts injected with scalp-derived T cells that had not been cultured with follicular homogenate. These data indicate that alopecia areata is mediated by T cells which recognize a follicular autoantigen.