gebhart/patrepeval huggingface dataset:
Lubrication Mechanism of Hip Joint Replacement Prostheses (1972)

A laboratory study has been made of the lubrication and friction characteristics of a plastic on metal (Charnley-Muller) and a metal on metal (McKee-Farrar) total hip joint replacement prostheses. The results show the effect of lubricant, speed, and load on the performance of the joints. Under a 560 lb load the coefficient of friction of the plastic to metal joint was lower than that of the metal to metal at speeds up to the equivalent of fast walking. Bovine serum and synovial fluid, as well as human serum albumin were found to be good lubricants of both types of prostheses. The frictional force produced by the metal on metal prosthesis increased linearly with load, in both the dry and lubricated states. This was not the case with the plastic to metal joint. The results show that at low physiological loads the effort required to articulate the prostheses are comparable while at higher loads the friction force of the metal to plastic is significantly lower. Friction readings taken with no lubricant indicate the serious damage which would result in the human body if a metal to metal prosthesis became devoid of liquid. The load and speed behavior of the prostheses require different interpretation of the data than presently postulated.
Hyaluronidase Activity of Human Hyal1 Requires Active Site Acidic and Tyrosine Residues (2009)

Hyaluronidases are a family of endolytic glycoside hydrolases that cleave the beta1-4 linkage between N-acetylglucosamine and glucuronic acid in hyaluronan polymers via a substrate-assisted mechanism. In humans, turnover of hyaluronan by this enzyme family is critical for normal extracellular matrix remodeling. However, elevated expression of the Hyal1 isozyme accelerates tumor growth and metastatic progression. In this study, we used structural information, site-directed mutagenesis, and steady state enzyme kinetics to probe molecular determinants of human Hyal1 function. Mutagenesis of active site residues Glu(131) and Tyr(247) to Gln and Phe, respectively, eliminated activity at all hyaluronan concentrations (to 125 microm or 2.5 mg/ml). Conservative mutagenesis of Asp(129) and Tyr(202) significantly impaired catalysis by increases of 5- and 10-fold in apparent K(m) and reductions in V(max) of 95 and 50%, respectively. Tyr(247) and Asp(129) are required for stabilization of the catalytic nucleophile, which arises as a resonance intermediate of N-acetylglucosamine on the substrate. Glu(131) is a likely proton donor for the hydroxyl leaving group. Tyr(202) is a substrate binding determinant. General disulfide reduction had no effect on activity in solution, but enzymatic deglycosylation reduced Hyal1 activity in a time-dependent fashion. Mutagenesis identified Asn(350) glycosylation as the requisite modification. Deletion of the C-terminal epidermal growth factor-like domain, in which Asn(350) is located, also eliminated activity, irrespective of glycosylation. Collectively, these studies define key components of Hyal1 active site catalysis, and structural factors critical for stability. Such detailed understanding will allow rational design of enzyme modulators.
Clinical Investigations of the Salivary Buffering Action (1959)

(1959). Clinical Investigations of the Salivary Buffering Action. Acta Odontologica Scandinavica: Vol. 17, No. 2, pp. 131-165.
Genetic Organization of the Vibrio harveyi dnaA Gene Region and Analysis of the Function of the V. harveyi DnaA Protein in Escherichia coli (2002)

The Vibrionaceae family is distantly related to Enterobacteriaceae within the group of bacteria possessing the Dam methylase system. We have cloned, sequenced, and analyzed the dnaA gene region of Vibrio harveyi and found that although the organization of the V. harveyi dnaA region differs from that of Escherichia coli, the expression of both genes is autoregulated and ATP-DnaA binds cooperatively to ATP-DnaA boxes in the dnaA promoter region. The DnaA proteins of V. harveyi and E. coli are interchangeable and function nearly identically in controlling dnaA transcription and the initiation of chromosomal DNA replication despite the evolutionary distance between these bacteria.
1-Aryl-2-(aminomethyl)cyclopropanecarboxylic acid derivatives. A new series of potential antidepressants (1987)

A series of 1-aryl-2-(aminomethyl)cyclopropanecarboxylic acid derivatives were synthesized and evaluated as potential antidepressants. Compounds with the Z configuration were synthesized from 1-aryl-2-oxo-3-oxabicyclo[3.1.0]hexane and those with the E configuration from (E)-1-phenyl-2-(hydroxymethyl)cyclopropanecarboxylic acid. The compounds were evaluated in animal tests designed to reveal potential antidepressant activity and the existence of undesirable side effects. Several derivatives were more active than imipramine and desipramine. On the basis of its activity in pharmacological animal tests of antidepressant activity and its potential lack of side effects, 1-phenyl-1-[(diethylamino)carbonyl]-2- (aminomethyl)cyclopropane hydrochloride, midalcipran (INN), was selected for further development. This compound is currently in phase III clinical evaluation.
Phase and microstructure investigations of boron nitride thin films by spectroscopic ellipsometry in the visible and infrared spectral range (1997)

Spectroscopic ellipsometry over the spectral range from 700 to 3000 cm−1 and from 1.5 to 3.5 eV is used to simultaneously determine phase and microstructure of polycrystalline hexagonal and cubic boron nitride thin films deposited by magnetron sputtering on (100) silicon. The results are obtained from a single microstructure-dependent model for both infrared and visible-light thin-film anisotropic dielectric functions. The optical behavior of high c-BN content thin films is described by an effective medium approximation. We obtain the amount of h-BN within high c-BN content thin films. A thin oriented nucleation layer between the silicon substrate and the high c-BN content layer is demonstrated. The preferential arrangement of the grain c axes within the h-BN thin films are found to be dependent on the growth parameters. The results from the infrared and visible spectral range ellipsometry model are compared to each other and found to be highly consistent.
The dynamics of ozone generation and mode transition in air surface micro-discharge plasma at atmospheric pressure (2012)

We present the transient, dynamic behavior of ozone production in surface micro-discharge (SMD) plasma in ambient air. Ultraviolet absorption spectroscopy at 254 nm was used to measure the time development of ozone density in a confined volume. We observed that ozone density increases monotonically over 1000 ppm for at least a few minutes when the input power is lower than ∼0.1 W/cm ^2 . Interestingly, when input power is higher than ∼0.1 W/cm ^2 , ozone density starts to decrease in a few tens of seconds at a constant power density, showing a peak ozone density. A model calculation suggests that the ozone depletion at higher power density is caused by quenching reactions with nitrogen oxides that are in turn created by vibrationally excited nitrogen molecules reacting with O atoms. The observed mode transition is significantly different from classical ozone reactors in that the transition takes place over time at a constant power. In addition, we observed a positive correlation between time-averaged ozone density and the inactivation rate of Escherichia coli on adjacent agar plates, suggesting that ozone plays a key role in inactivating bacteria under the conditions considered here.
imMens: Real‐time Visual Querying of Big Data (2013)

Abstract Data analysts must make sense of increasingly large data sets, sometimes with billions or more records. We present methods for interactive visualization of big data, following the principle that perceptual and interactive scalability should be limited by the chosen resolution of the visualized data, not the number of records. We first describe a design space of scalable visual summaries that use data reduction methods (such as binned aggregation or sampling) to visualize a variety of data types. We then contribute methods for interactive querying (e.g., brushing &amp; linking) among binned plots through a combination of multivariate data tiles and parallel query processing. We implement our techniques in imMens, a browser‐based visual analysis system that uses WebGL for data processing and rendering on the GPU. In benchmarks imMens sustains 50 frames‐per‐second brushing &amp; linking among dozens of visualizations, with invariant performance on data sizes ranging from thousands to billions of records.
Widespread distribution of knockdown resistance mutations in the bed bug, Cimex lectularius (Hemiptera: Cimicidae), populations in the United States (2010)

We previously reported high deltamethrin resistance in bed bugs, Cimex lectularius, collected from multiple areas of the United States (Romero et al., 2007). Recently, two mutations, the Valine to Leucine mutation (V419L) and the Leucine to Isoleucine mutation (L925I) in voltage-gated sodium channel alpha-subunit gene, had been identified to be responsible for knockdown resistance (kdr) to deltamethrin in bed bugs collected from New York (Yoon et al., 2008). The current study was undertaken to investigate the distribution of these two kdr mutations in 110 bed bug populations collected in the United States. Out of the 17 bed bug populations that were assayed for deltamethrin susceptibility, two resistant populations collected in the Cincinnati area and three deltamethrin-susceptible lab colonies showed neither of the two reported mutations (haplotype A). The remaining 12 populations contained L925I or both V419L and L925I mutations in voltage-gated sodium channel alpha-subunit gene (haplotypes B&C). In 93 populations that were not assayed for deltamethrin susceptibility, 12 contained neither of the two mutations (haplotype A) and 81 contained L925I or V419L or both mutations (haplotypes B-D). Thus, 88% of the bed bug populations collected showed target-site mutations. These data suggest that deltamethrin resistance conferred by target-site insensitivity of sodium channel is widely spread in bed bug populations across the United States.
Interleukin-1 injected into mammalian brain stimulates astrogliosis and neovascularization (1988)

Interleukin-1 (IL-1), a protein produced by mononuclear phagocytes, helps to initiate the inflammatory response through its action upon a diverse population of cells. Recently this immunomodulator has been detected at sites of traumatized brain. As reported here, recombinant forms of IL-1 injected into the cerebral cortex of adult rats elicit not only astrogliosis but also new blood vessel growth. These responses are typical of brain injury and suggest that IL-1-secreting inflammatory cells may mediate wound healing in the CNS.
HEREDITY WITH REFERENCE TO CARCINOMA (1913)

The statistical study of carcinoma is regarded by many writers as having been carried as far as it can be profitable; and certainly but little that is new has been gained through this method during the last decade. Nevertheless, its possibilities have not been exhausted; and it is highly desirable that the whole neoplasm problem in all of its aspects be attacked again from the statistical standpoint, though in a somewhat different way. Practically all of the old statistical studies of neoplasms, particularly those of carcinoma, were based on mortality reports; or if not on these, on morbidity reports based on clinical diagnoses. In very few instances only has the statistical study been carried out on the basis of the records of a diagnostic pathological laboratory. Statistics of neoplasm from such a source must be of infinitely greater value than those founded on mortality statistics. In the records of
The effect of iron on the crystalline phases formed upon thermal decomposition of Mg-Al-Fe hydrotalcites (1998)

Layered double hydroxides (LDH) containing Mg II , Fe III , and Al III in the brucite-like layers and interlayer carbonate (with a constant M II /M III ratio but varying Al III /Fe III ratios) have been prepared and characterised by X-ray diffraction, thermal analysis, FT-IR and UV-VIS/diffuse reflectance spectroscopies, temperature-programmed reduction and specific surface area assessment through low temperature adsorption of N 2 . An Mg,Al-LDH, but with intercalated hexacyanoferrate(III), has been also prepared and characterised, in which simultaneous formation of the carbonate analogue did not occur. Thermal decomposition in air at 450 and 750°C leads to MgO and poorly crystallised MgFe 2 O 4 spinel (crystallinity increasing with the iron content), while for the hexacyano-containing sample, crystallization only is observed after calcination at 900°C. This different behaviour has been related to the initial location of the iron ions.
Characterization and modulation of human lymphokine (interleukin 2) activated killer cell induction. (1986)

Culture of human peripheral blood mononuclear cells with purified interleukin 2 (IL-2) results in the induction of a cytotoxic population of cells capable of lysing autologous tumor cells and natural killer (NK) cell resistant tumor cell lines. The current study was undertaken to characterize biological agents which might modulate the induction of lymphokine (IL-2) activated killer (LAK) cells and to optimize culture conditions for LAK cell induction. Preliminary studies were undertaken to characterize optimal time and IL-2 concentration for induction of LAK cell activity. Subsequently, we demonstrated that: (a) LAK cell induction is inhibited at high (2.5 X 10(6)/ml) cell concentrations and this phenomenon is due to the presence of monocytes; (b) depletion of monocytes allows LAK cell induction at 5-10-fold higher cell concentrations without altering the extent or range of LAK-cell activity; (c) interleukin 1 enhances and alpha- and beta-interferons inhibit IL-2 induced proliferation, without altering LAK cell induction; and (d) gamma-interferon alters neither IL-2 induction of proliferation nor LAK cell activity.
Peritumoral Fibroblast SPARC Expression and Patient Outcome With Resectable Pancreatic Adenocarcinoma (2007)

The expression of SPARC by peritumoral fibroblasts portends a poorer prognosis for patients with pancreatic cancer.
An Electrochemical Cell for End-Column Amperometric Detection in Capillary Electrophoresis (1995)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTAn Electrochemical Cell for End-Column Amperometric Detection in Capillary ElectrophoresisMei-Cheng. Chen and Hsuan-Jung. HuangCite this: Anal. Chem. 1995, 67, 21, 4010–4014Publication Date (Print):November 1, 1995Publication History Published online1 May 2002Published inissue 1 November 1995https://pubs.acs.org/doi/10.1021/ac00117a030https://doi.org/10.1021/ac00117a030research-articleACS PublicationsRequest reuse permissionsArticle Views102Altmetric-Citations33LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts
Liquid‐phase peptide synthesis on polyethylene glycol (PEG) supports using strategies based on the 9‐fluorenylmethoxycarbonyl amino protecting group: application of PEGylated peptides in biochemical assays (2002)

Stepwise synthetic assembly of polypeptide chains reversibly linked to polyethylene glycol represents a hybrid between traditional solution and solid-phase chemistries and combines the inherent advantages of both approaches. The technical simplicity and scalability of the liquid-phase peptide synthesis method renders it particularly attractive for multiple parallel syntheses, combinatorial approaches and the large-scale preparation of peptides. The versatile protection strategy based on the N alpha-fluorenylmethoxycarbonyl group commonly used in solid-phase peptide synthesis was adapted to the liquid-phase approach. Fluoride ions were used rather than the conventional organic base piperidine for the repetitive amino-deprotection step. Using a range of acid- and base-labile linkers between the polymer and the peptide, it was shown that free and fully side-chain protected peptides can be obtained using our version of the liquid-phase peptide synthesis method. Protocols for simultaneous multiple syntheses requiring a minimum of equipment are presented and the use of polyethylene glycol-bound peptides in biochemical binding and functional assay systems is demonstrated.
Pharmacokinetics of tumor-reactive immunotoxins in tumor-bearing mice: effect of antibody valency and deglycosylation of the ricin A chain on clearance and tumor localization. (1988)

The blood clearance and tissue distribution of immunotoxins composed of either intact or Fab' fragments of tumor-reactive, monoclonal rat antimurine immunoglobulin D (anti-delta) or nonreactive, normal rat immunoglobulin G and ricin A chain (native or chemically deglycosylated) were determined in BCL1 tumor-bearing mice. In the presence of accessible target cells, neither the valency of the antibody nor deglycosylation of the A chain affect the initial rate of clearance (alpha phase) of immunotoxins from the blood; however, both factors affect the levels of tumor-specific and nonspecific localization of the immunotoxins. Thus, the use of immunotoxins with deglycosylated A chain greatly reduced the levels of nonspecific uptake by the liver and concomitantly increased tumor-specific localization. Immunotoxins prepared with Fab' fragments of anti-delta antibody and deglycosylated A chain were twice as effective at localizing to splenic tumor than immunotoxins prepared with intact immunoglobulin G and deglycosylated A chain. Approximately 90% of tumor-specific localization of anti-delta immunotoxins occurred within 1 h after injection and less than 5% of the immunotoxin remained in the circulation 4 h after injection. In addition, the antigen-binding capacity of the remaining circulating immunotoxins decreased in a linear manner over the first 10 h to approximately 20% of the initial binding activity. Thus, by 10 h after injection, only 2-3% of injected immunotoxin remained in the circulation and this material expressed little antigen reactivity. Analysis of the in vivo stability of circulating 125I-labeled immunotoxins in tumor-bearing mice demonstrated that Fab' immunotoxins are more stable than IgG immunotoxins prepared with N-succinimidyl-3-(2-pyridylthio)propionate. In BCL1-bearing mice, significant splitting of the anti-delta immunotoxins did not occur until tumor localization was virtually complete.
Thiol‐directed immobilization of recombinant IgG‐binding receptors (1989)

A genetic engineering approach is described for directed immobilization of IgG-binding receptors to a thiol-containing matrix using a single cysteine residue. The cysteine residue is introduced into the C-terminal part of receptors based on staphylococcal protein A. Receptors containing one, two or five IgG-binding domains were produced in Escherichia coli and subsequently immobilized on thiopropyl-Sepharose. A high amount, 5 mumol/ml gel (45 mg/ml), of recombinant receptor could be rapidly immobilized to the solid support and both the gel and the immobilized receptor could be regenerated by reduction and oxidation reactions. The gel was used for affinity purification of human IgG and analysis of IgG-binding capacity at different amounts of immobilized recombinant protein show the same maximal IgG-binding capacity (20-25 mg/ml) for all three immobilized receptors. However, at low substitution grade of receptors, the immobilized receptor molecules were shown to bind one (Z-Cys) and two (ZZ-Cys) IgG molecules, respectively. These results demonstrate that the immobilized protein molecules are in a functionally active form and that a two-domain receptor can bind two molecules of IgG without steric hindrance. Interestingly, the five-domain receptor (ZV-Cys), with a structure similar to native protein A, can only bind approximately two IgG molecules, despite the five-domain structure of the molecule.
Insulin-Responsive Compartments Containing GLUT4 in 3T3-L1 and CHO Cells: Regulation by Amino Acid Concentrations (2001)

In fat and muscle, insulin stimulates glucose uptake by rapidly mobilizing the GLUT4 glucose transporter from a specialized intracellular compartment to the plasma membrane. We describe a method to quantify the relative proportion of GLUT4 at the plasma membrane, using flow cytometry to measure a ratio of fluorescence intensities corresponding to the cell surface and total amounts of a tagged GLUT4 reporter in individual living cells. Using this assay, we demonstrate that both 3T3-L1 and CHO cells contain intracellular compartments from which GLUT4 is rapidly mobilized by insulin and that the initial magnitude and kinetics of redistribution to the plasma membrane are similar in these two cell types when they are cultured identically. Targeting of GLUT4 to a highly insulin-responsive compartment in CHO cells is modulated by culture conditions. In particular, we find that amino acids regulate distribution of GLUT4 to this kinetically defined compartment through a rapamycin-sensitive pathway. Amino acids also modulate the magnitude of insulin-stimulated translocation in 3T3-L1 adipocytes. Our results indicate a novel link between glucose and amino acid metabolism.
Bidirectional solid-phase sequencing of in vitro-amplified plasmid DNA. (1991)

A solid-phase approach is described for manual and automated sequencing of plasmid DNA obtained directly from bacterial colonies through the polymerase chain reaction. The DNA fragment is selectively immobilized to magnetic beads and after strand-specific elution, the eluted strand, as well as the remaining immobilized strand, is used for bidirectional dideoxy sequencing. The solid-phase approach ensures that the amplification and the sequencing reactions can be performed under optimal conditions. The approach is exemplified by fluorescent sequencing of a cloned Streptomyces curacoi gene having a G + C content of more than 70%.