gebhart/patrepeval huggingface dataset:
Inhibition of human blood clotting by extracts of Ascaris suum. (1982)

The effects of soluble extracts of Ascaris suum on human blood coagulation were investigated. Whole worm supernatant solution prolonged the whole blood clotting time and the kaolin-activated, partial thromboplastin time but it did not alter the prothrombin time. These data indicate impairment of the intrinsic pathway of blood coagulation. Whole worm supernate inhibited platelet aggregation induced by ADP and ristocetin. This supernate did not affect fibrinolysis. The maximal concentration of anticoagulant activity was found in the pseudocoelomic fluid of the worm. Activity was also noted in the cuticle and secretory/excretory products. Perhaps inhibition of blood clotting by helminths may facilitate their passage through the blood stream.
Increased serum TRAIL and DR5 levels correlated with lung function and inflammation in stable COPD patients (2015)

Our results suggested that circulating TRAIL and DR5 increased in COPD patients and were associated with lung function and systemic inflammation in COPD. Future studies are needed to verify whether and how TRAIL and its receptors play roles in COPD.
Inhibition of neuropathic pain by decreased expression of the tetrodotoxin-resistant sodium channel, NaV1.8 (2002)

Neuropathic pain is a debilitating chronic syndrome that often arises from injuries to peripheral nerves. Such pain has been hypothesized to be the result of an aberrant expression and function of sodium channels at the site of injury. Here, we show that intrathecal administration of specific antisense oligodeoxynucleotides (ODN) to the peripheral tetrodotoxin (TTX)-resistant sodium channel, NaV1.8, resulted in a time-dependent uptake of the ODN by dorsal root ganglion (DRG) neurons, a selective "knock-down" of the expression of NaV1.8, and a reduction in the slow-inactivating, TTX-resistant sodium current in the DRG cells. The ODN treatment also reversed neuropathic pain induced by spinal nerve injury, without affecting non-noxious sensation or response to acute pain. These data provide direct evidence linking NaV1.8 to neuropathic pain. As NaV1.8 expression is restricted to sensory neurons, this channel offers a highly specific and effective molecular target for the treatment of neuropathic pain.
Postnatal treatment with retinoic acid increases the number of pulmonary alveoli in rats (1996)

Dexamethasone, a glucocorticosteroid hormone, inhibits the formation of alveoli; retinoids and glucocorticosteroid hormones can be mutually antagonistic. These observations led us to test the hypothesis that the administration of retinoic acid to postnatal rats would prevent the low alveolar number and the low body mass-specific gas-exchange surface area (Sa) produced by treatment with dexamethasone. We used serial lung sections to distinguish alveoli from alveolar ducts and stereological procedures that allow quantitation of alveoli uninfluenced by their size, shape, or distribution. Treatment with retinoic acid prevented the low number of alveoli and the low body mass-specific Sa caused by treatment with dexamethasone. In otherwise untreated rats, retinoic acid caused a 50% increase in the number of alveoli, but without an increase in Sa, suggesting the action of a regulatory mechanism to prevent unneeded Sa. These findings provide the first experimental support for the possibility that, in individuals with too few alveoli for adequate gas exchange, treatment with a pharmacological agent may provide preventative or remedial therapy.
Co-regulation of two gene activities by tetracycline via a bidirectional promoter (1995)

Journal Article Co-regulation of two gene activities by tetracycline via a bidirectional promoter Get access Udo Baron, Udo Baron Zentrum für Molekulare Biologie der Universität Heidelberg (ZMBH)Im Neuenheimer Feld 282, 69120 Heidelberg, Germany Search for other works by this author on: Oxford Academic PubMed Google Scholar Sabine Freundlieb, Sabine Freundlieb Zentrum für Molekulare Biologie der Universität Heidelberg (ZMBH)Im Neuenheimer Feld 282, 69120 Heidelberg, Germany Search for other works by this author on: Oxford Academic PubMed Google Scholar Manfred Gossen, Manfred Gossen Zentrum für Molekulare Biologie der Universität Heidelberg (ZMBH)Im Neuenheimer Feld 282, 69120 Heidelberg, Germany + Present address: Department of Molecular and Cell Biology, University of California at Berkeley, 4 Barker Hall, Berkeley, CA 94720, USA Search for other works by this author on: Oxford Academic PubMed Google Scholar Hermann Bujard Hermann Bujard * Zentrum für Molekulare Biologie der Universität Heidelberg (ZMBH)Im Neuenheimer Feld 282, 69120 Heidelberg, Germany * To whom correspondence should be addressed Search for other works by this author on: Oxford Academic PubMed Google Scholar Nucleic Acids Research, Volume 23, Issue 17, 11 September 1995, Pages 3605–3606, https://doi.org/10.1093/nar/23.17.3605 Published: 11 September 1995 Article history Received: 15 June 1995 Accepted: 04 August 1995 Published: 11 September 1995
Imaging caries lesions and lesion progression with polarization sensitive optical coherence tomography (2002)

New diagnostic tools are needed for the characterization of dental caries in the early stages of development. If carious lesions are detected early enough, they can be arrested without the need for surgical intervention. The objective of this study was to demonstrate that polarization sensitive optical coherence tomography (PS-OCT) can be used for the imaging of early caries lesions and for the monitoring of lesion progression over time. High-resolution polarization resolved images were acquired of natural caries lesions and simulated caries lesions of varying severity created over time periods of 1 to 14 days. Linearly polarized light was incident on the tooth samples and the reflected intensity in both orthogonal polarizations was measured. PS-OCT was invaluable for removing the confounding influence of surface reflections and native birefringence necessary for the enhanced resolution of the surface structure of caries lesions. This study demonstrated that PS-OCT is well suited for the imaging of interproximal and occlusal caries, early root caries, and for imaging decay under composite fillings. Longitudinal measurements of the reflected light intensity in the orthogonal polarization state from the area of simulated caries lesions linearly correlated with the square root of time of demineralization indicating that PS-OCT is well suited for monitoring changes in enamel mineralization over time.
Expression of telomerase hTERT in human non-small cell lung cancer and its correlation with c-myc gene. (2003)

hTERT may be a useful tumor marker in diagnosing lung cancer. Significant correlation between the expression of hTERT and c-myc mRNA indicates that the activation and up-regulation of hTERT might be conferred by over-expression of c-myc gene.
Ultrafast Molecular Reaction Dynamics in Real-Time: Progress Over a Decade (1990)

One of the goals of researchers in the field of reaction dynamics is to develop an understanding of the elementary steps involved in a chemical reaction on a molecular level (see e.g. Ref. 1). The century-old Arrhenius rate law, a phenomenological description of the temperature dependence of rates of reactions in bulk, has been used extensively to deduce activation energies and frequency factors. The activated complex theory (also referred to as absolute rate theory or transition-state theory, see e.g. Refs. 2, 3) postulated more than 50 years ago, provides a useful interpretation of the Arrhenius rate parameters in terms of molecular properties. These parameters contain practical information about rates, but they do not express the molecular details of a reaction. At this juncture, two types of questions can be raised--one concerning the effects of the environment on rates in condensed media, and the other, the purely molecular aspects of reactions in the absence of an environment, i.e. in an isolated molecular system. We restrict our attention to the latter case for the purposes of this review.
Low molecular weight iron-binding factor from mammalian tissue that potentiates bacterial growth. (1980)

A low molecular weight, iron-binding factor was isolated from horse liver. This host-associated iron transfer factor (HAITF) is capable of binding iron and stimulating bacterial growth by promoting iron uptake into bacteria. Also, when injected into infected animals, HAITF increases the virulence of bacterial infections. HAITF bioactivity is ubiquitous in animal tissues and present in serum. It is proposed that HAITF is a factor that inadvertently plays a role in the host-parasite competition for iron.
Compartmentalization of protein traffic in insulin-sensitive cells (1996)

Insulin-sensitive cells, adipocytes and myocytes, translocate a number of intracellular proteins to the cell surface in response to insulin. Among these proteins are glucose transporters 1 and 4 (GLUT-1 and GLUT-4, respectively), receptors for insulin-like growth factor II (IGF-II)/mannose 6-phosphate (Man-6-P) and transferrin, the aminopeptidase gp 160, caveolin, and a few others. In the case of insulin-activated glucose transport, this translocation has been proven to be the major, if not the only regulatory mechanism of this process. It seems likely that the cell surface recruitment of the IGF-II/Man-6-P and transferrin receptors also serves the nutritional needs of cells, whereas the physiological role of the aminopeptidase gp160 remains uncertain. Analysis of the compartmentalization and trafficking pathways of translocatable proteins in fat cells identified more than one population of recycling vesicles, although all have identical sedimentation coefficients and buoyant densities in vitro. GLUT-4-containing vesicles include essentially all the intracellular GLUT-4, gp160, and the acutely recycling populations of receptors for IGF-II/Man-6-P and transferrin. Besides these proteins, which can be considered as vesicle "cargo", GLUT-4-containing vesicles have other components, like secretory carrier-associated membrane proteins (SCAMP), Rab(s), and vesicle-associated membrane protein (VAMP)/cellubrevin, which are ubiquitous to secretory vesicles and granules from different tissues. GLUT-1 and caveolin are excluded from GLUT-4-containing vesicles and form different vesicular populations of unknown polypeptide composition. In skeletal muscle, two independent populations of GLUT-4-containing vesicles are found, insulin sensitive and exercise sensitive, which explains the additive effect of insulin and exercise on glucose uptake. Both vesicular populations are similar to each other and to analogous vesicles in fat cells.
A magnetoresistive readout transducer (1971)

A new type of reproduce transducer for reading magnetically recorded tapes is described. The device structure, which utilizes the magnetoresistive effect in a thin magnetic film deposited onto a nonmagnetic substrate, provides wavelength response characteristics comparable to existing technology. Indigenous noise effects are subordinate to tape noise. No intrinsic frequency limitations are experienced for recording bandwidths in existence today. Since the device detects the tape's fringing fields directly, the output is not a function of tape velocity. The device construction lends itself nicely to multichannel head assemblies. The transducer may also be used to detect digitally recorded information.
Chronic stress alters synaptic terminal structure in hippocampus (1997)

Repeated psychosocial or restraint stress causes atrophy of apical dendrites in CA3 pyramidal neurons of the hippocampus, accompanied by specific cognitive deficits in spatial learning and memory. Excitatory amino acids mediate this atrophy together with adrenal steroids and the neurotransmitter serotonin. Because the mossy fibers from dentate granule neurons provide a major excitatory input to the CA3 proximal apical dendrites, we measured ultrastructural parameters associated with the mossy fiber-CA3 synapses in control and 21-day restraint-stressed rats in an effort to find additional morphological consequences of stress that could help elucidate the underlying anatomical as well as cellular and molecular mechanisms. Although mossy fiber terminals of control rats were packed with small, clear synaptic vesicles, terminals from stressed animals showed a marked rearrangement of vesicles, with more densely packed clusters localized in the vicinity of active zones. Moreover, compared with controls, restraint stress increased the area of the mossy fiber terminal occupied by mitochondrial profiles and consequently, a larger, localized energy-generating capacity. A single stress session did not produce these changes either immediately after or the next day following the restraint session. These findings provide a morphological marker of the effects of chronic stress on the hippocampus that points to possible underlying neuroanatomical as well as cellular and molecular mechanisms for the ability of repeated stress to cause structural changes within the hippocampus.
A vaccine strain of pseudorabies virus with deletions in the thymidine kinase and glycoprotein X genes. (1987)

A pseudorabies virus (PRV) mutant with deletions in genes for glycoprotein X (gX) and thymidine kinase, designated delta GX delta TK, was constructed and evaluated as a vaccine for protecting swine against PRV-induced mortality. Doses greater than or equal to 10(3) plaque-forming units (PFU) of this strain given to mice provided protection from challenge exposure with virulent PRV. Sera tested from mice inoculated with delta GX delta TK had high titers of neutralizing antibody to PRV, but reactivity in the same sera was not significantly different from that in sera from noninoculated mice (controls) when sera from both groups were evaluated by use of an ELISA with gX antigen produced in Escherichia coli. Compared with noninoculated pigs (controls), those given delta GX delta TK (greater than or equal to 10(2) PFU) were protected completely from lethal challenge exposure, without experiencing adverse effects on weight gain and with reduction of shedding of virulent challenge virus. Serotest results indicated that, although inoculated pigs responded with strong neutralizing antibody titers, the response of delta GX delta TK-inoculated pigs to gX, as determined by ELISA before challenge exposure, was not significantly greater than the ELISA values obtained from control pigs. The ELISA values from a group of pigs inoculated with a commercially available vaccine were significantly (P less than 0.05) higher than those of control pigs. The experimental vaccine, delta GX delta TK, was avirulent for mice, swine, and sheep, but was mildly virulent for calves (mortality, 1 of 12) and more virulent for dogs (mortality, 3 of 6) and cats (mortality, 2 of 6).(ABSTRACT TRUNCATED AT 250 WORDS)
Vagino-Sacropexie mit einem Rektusscheidenzügel (2006)

Im Rahmen der Korrektur von Senkungszuständen der Scheide werden verschiedene Operationsverfahren angewandt. Bei den abdominalen Methoden wird die Scheide bzw. der Scheidenstumpf zumeist am Os sacrum fixiert. Dazu sind verschiedene Materialien erhältlich, von denen wir in den letzten Jahren zumeist Prolene-Zügel benutzten.
The feeding selectivity of silver carp, Hypophthalmichthys molitrix Val. (1989)

Effects of particle size, fish size and temperature on the filtration rate of silver carp were determined. When feeding at 20°C on zooplankton and spherical particles (yeast, micronic beads and pollen), 32‐g silver carp filter particles larger than 70 urn at a maximum rate of 18.251 h −1 . For particles smaller than 70 μm, filtration rates decrease with decreasing particle size until there is no measured filtration for particles smaller than 10 μm. Filtering rates ( FR ) for particles between 10 and 50 μm are described by the equation, FR =−20.8 + 21.7 × log particle diameter. Filtration rates rise as fish size, particle size and temperature increase. Filtration rates per unit biomass, however, fall as fish size increases: FR = 1.54 W 0.713 , where FR is the maximum filtration rate in 1 h 1 fish 1 and W is weight of fish in grammes. The results of these trials are consistent with the hypothesis that particle selection by silver carp is a mechanical, passive function of gill raker morphology.
Sequence homology between RNAs encoding rat alpha-fetoprotein and rat serum albumin. (1981)

We have determined the sequences of the recombinant DNA inserts of three bacterial plasmid cDNA clones containing most of the rat alpha a-fetoprotein mRNA. The resultant nucleotide sequence of alpha-fetoprotein was exhaustively compared to the nucleotide sequence of the mRNA encoding rat serum albumin. These two mRNAs have extensive homology (50%) throughout and the same intron locations. The amino acid sequence of rat alpha-fetoprotein has been deduced from the nucleotide sequence, and its comparison to rat serum albumin's amino acid sequence reveals a 34% homology. The regularly spaced positions of the cysteines found in serum albumin are conserved in rat alpha-fetoprotein, indicating that these two proteins may have a similar secondary folding structure. These homologies indicate that alpha-fetoprotein and serum albumin were derived by duplication of a common ancestral gene and constitute a gene family.
Effect of Intrathoracic Pressure on Left Ventricular Performance (1979)

Left ventricular dysfunction is common in respiratory-distress syndrome, asthma and obstructive lung disease. To understand the contribution of intrathoracic pressure to this problem, we studied the effects of Valsalva and Müller maneuvers on left ventricular function in eight patients. Implantation of intramyocardial markers permitted beat-by-beat measurement of the velocity of fiber shortening (VCF) and left ventricular volume. During the Müller maneuver, VCF and ejection fraction decreased despite an increase in left ventricular volume and a decline in arterial pressure. In addition, when arterial pressure was corrected for changes in intrapleural pressure during either maneuver it correlated better with left ventricular end-systolic volumes than did uncorrected arterial pressures. These findings suggest that negative intrathoracic pressure affects left ventricular function by increasing left ventricular transmural pressures and thus afterload. We conclude that large intrathoracic-pressure changes, such as those that occur in acute pulmonary disease, can influence cardiac performance.
Stimulus-specific neuronal oscillations in orientation columns of cat visual cortex. (1989)

In areas 17 and 18 of the cat visual cortex the firing probability of neurons, in response to the presentation of optimally aligned light bars within their receptive field, oscillates with a peak frequency near 40 Hz. The neuronal firing pattern is tightly correlated with the phase and amplitude of an oscillatory local field potential recorded through the same electrode. The amplitude of the local field-potential oscillations are maximal in response to stimuli that match the orientation and direction preference of the local cluster of neurons. Single and multiunit recordings from the dorsal lateral geniculate nucleus of the thalamus showed no evidence of oscillations of the neuronal firing probability in the range of 20-70 Hz. The results demonstrate that local neuronal populations in the visual cortex engage in stimulus-specific synchronous oscillations resulting from an intracortical mechanism. The oscillatory responses may provide a general mechanism by which activity patterns in spatially separate regions of the cortex are temporally coordinated.
Human scFv SIgA expressed on Lactococcus lactis as a vector for the treatment of mucosal disease (2008)

The gastrointestinal tract is a complex niche and the main port of entry of many pathogens that trigger a wide range of diseases like inflammatory bowel disease (IBD) and colon cancer. Antibodies are effective for treating such diseases, but a system capable of local delivery at the site of the pathology, thus avoiding systemic side effects, is not yet available. Here we report a novel recombinant scFvSIgA1 protein produced by Lactococcus lactis, anchored to the bacterial membrane, which retains its full immuno-recognizing potential. This scFv fragment employed was specific for a colon cancer epitope, epithelial glycoprotein protein-2 (EGP-2). Accordingly L. lactis expressing this chimeric protein was capable of binding cells expressing this epitope. Expression of specific antibodies on bacteria may allow local delivery of anticancer agents produced by such bacteria in conjunction with the antibody and provides a new avenue in the quest for targeted drug delivery.
Nanoceria: A Rare-Earth Nanoparticle as a Novel Anti-Angiogenic Therapeutic Agent in Ovarian Cancer (2013)

Ovarian cancer (OvCa) is the fifth most common cause of death from all cancers among women in United Sates and the leading cause of death from gynecological malignancies. While most OvCa patients initially respond to surgical debulking and chemotherapy, 75% of patients later succumb to the disease. Thus, there is an urgent need to test novel therapeutic agents to counteract the high mortality rate associated with OvCa. In this context, we have developed and engineered Nanoceria (NCe), nanoparticles of cerium oxide, possessing anti-oxidant properties, to be used as a therapeutic agent in OvCa. We show for the first time that NCe significantly inhibited production of reactive oxygen species (ROS) in A2780 cells, attenuated growth factor (SDF1, HB-EGF, VEGF(165) and HGF) mediated cell migration and invasion of SKOV3 cells, without affecting the cell proliferation. NCe treatment also inhibited VEGF(165) induced proliferation, capillary tube formation, activation of VEGFR2 and MMP2 in human umbilical vascular endothelial cells (HUVEC). NCe (0.1 mg/kg body weigh) treatment of A2780 ovarian cancer cells injected intra-peritoneally in nude mice showed significant reduction (p<0.002) in tumor growth accompanied by decreased tumor cell proliferation as evident from reduced tumor size and Ki67 staining. Accumulation of NCe was found in tumors isolated from treated group using transmission electron microscopy (TEM) and inductively coupled plasma mass spectroscopy (ICP-MS). Reduction of the tumor mass was accompanied by attenuation of angiogenesis, as observed by reduced CD31 staining and specific apoptosis of vascular endothelial cells. Collectively, these results indicate that cerium oxide based NCe is a novel nanoparticle that can potentially be used as an anti-angiogenic therapeutic agent in ovarian cancer.
Rapid Platelet-Function Assay (1999)

The RPFA provides rapid information on platelet function that mirrors turbidimetric platelet aggregation and reflects GP IIb/IIIa receptor blockade.