gebhart/patrepeval huggingface dataset:
Variations in Solution Chemistry During the Low‐Temperature Formation of Hydroxyapatite (1991)

Both the kinetics and the microstructure of monolithic hydroxyapatite formed by a low‐temperature dissolution and precipitation reaction strongly depend on the conditions in solution during the reaction. The relationships between the molar ratio of the particulate reactants (dicalcium phosphate and tetracalcium phosphate), the solution chemistry, and the rates of formation of hydroxyapatite are examined. During reaction, steady‐state solution conditions are rapidly achieved. However, the steady states attained are not those associated with the metastable invariant point involving the reactants. Rather, the steady‐state condition varies depending on the molar ratio of the reactants. The ultimate product of the reactions investigated is calcium‐deficient hydroxyapatite. Hydroxyapatite formation occurs in two stages: initial formation of nearly stoichiometric hydroxyapatite followed by its conversion to calcium‐deficient material. Microstructural evidence indicates that the formation of hydroxyapatite occurs in association with dicalcium phosphate, eventually causing the dissolution of the hydroxyapatite reactant to become diffusionally controlled. Effects of common ions, sodium chloride and magnesium chloride, on the chemistry of the aqueous phase and on microstructural development are investigated.
Planning of Small Earth Station Terminals in India and the Finance Policy (1988)

For a country of the size and population of India, the Satellite technology in the domestic communication network assumes a great significance. The introduction of DOMSAT system in India has been highly conducive to the expansion of telecommunication services to the far-reaches of the country, through large scale installation of small earth stations, providing voice and/or non-voice services. A number of measures are under consideration for adoption in future configurations of small earth station terminals, making the installations cost effective, reliable and competitive compared to other modes of communication. Exponential increase in the provision of very small earth Station terminals for transmission of low bit rate data links, thereby, providing services in the nature of message transfer, is visualised. Varied procedures are being adopted for financing the projects for the provision of small earth station terminals for public and business communication requirements.
Thymus-mediated immune tolerance to renal allograft is donor but not tissue specific. (1991)

Studies were conducted in Lewis (RT1l) rats to determine whether the process of unresponsiveness to kidney graft induced by the intrathymic glomerular transplantation were donor-strain specific as suggested by previous studies (Remuzzi et al., Lancet 1991;337:750-752). When glomeruli from Sprague-Dawley rats were injected in the thymus of Lewis rats, the subsequent kidney graft from a "third party" Brown-Norway (RT1n) rejected within 9 to 14 days. Moreover, an alternative site for glomerular antigen inoculation, such as i.p. administration, failed to induce a state of unresponsiveness to renal allograft. Whether tolerance was tissue specific was investigated by intrathymic injection of a preparation of donor blood cells that only included white cells. Such a maneuver, followed 10 days later by a kidney transplant, allowed indefinite renal graft survival in all animals, whereas all rats injected intrathymically with blood cell medium alone rejected the kidney graft in 8 to 11 days. Shortening the time interval between intrathymic injection of blood cells and kidney transplantation still allowed the graft to survive indefinitely. Finally, Lewis (RT1l) rats with chronic renal failure injected intrathymically with blood cells from Brown-Norway (RT1n) rats tolerated indefinitely a subsequent kidney graft from the same donor. These findings indicate that (1) the induction of immune tolerance to renal allograft induced by intrathymic injection of antigens is donor but not tissue specific; (2) the time interval between intrathymic injection of donor cells and the subsequent kidney transplantation can be reduced to 24 h; and (3) uremia does not preclude the possibility of renal allograft tolerance after the thymus procedure.
The Pharmacological Effects of Morroniside and Loganin Isolated from Liuweidihuang Wan, on MC3T3-E1 Cells (2010)

Liuweidihuang wan (LW), initially a well-known formula for curing "wu chi wu ruan", is commonly used nowadays for clinical treatment of postmenopausal osteoporosis (PO), but the identity of the effective substance(s) remains unclear. The present study was designed to evaluate the effects of morroniside and loganin isolated from LW on the proliferation, differentiation and apoptosis of MC3T3-E1 cells, as well as the possible mechanism of action. Morroniside and loganin had no effects on the proliferation of MC3T3-E1 cells, but both susbtances could improve the activity of alkaline phosphatase (ALP), and increase the contents of collagen type I and osteocalcin. Simultaneously, the mRNA expression of caspase-3, capase-9, RANKL was down-regulated and that of bcl-2 was up-regulated, which partially explains the anti-osteoporosis mechanism in MC3T3-E1 cells. In conclusion, morroniside and loganin may directly promote the differentiation and inhibit the apoptosis of MC3T3-E1 cells, and accordingly indirectly reduce bone resorption, which makes them promising natural drugs leads for treating PO in the near future.
Reprogramming of Human Fibroblasts to Induced Pluripotent Stem Cells under Xeno-free Conditions   (2009)

The availability of induced pluripotent stem cells (iPSCs) has created extraordinary opportunities for modeling and perhaps treating human disease. However, all reprogramming protocols used to date involve the use of products of animal origin. Here, we set out to develop a protocol to generate and maintain human iPSC that would be entirely devoid of xenobiotics. We first developed a xeno-free cell culture media that supported the long-term propagation of human embryonic stem cells (hESCs) to a similar extent as conventional media containing animal origin products or commercially available xeno-free medium. We also derived primary cultures of human dermal fibroblasts under strict xeno-free conditions (XF-HFF), and we show that they can be used as both the cell source for iPSC generation as well as autologous feeder cells to support their growth. We also replaced other reagents of animal origin (trypsin, gelatin, matrigel) with their recombinant equivalents. Finally, we used vesicular stomatitis virus G-pseudotyped retroviral particles expressing a polycistronic construct encoding Oct4, Sox2, Klf4, and GFP to reprogram XF-HFF cells under xeno-free conditions. A total of 10 xeno-free human iPSC lines were generated, which could be continuously passaged in xeno-free conditions and maintained characteristics indistinguishable from hESCs, including colony morphology and growth behavior, expression of pluripotency-associated markers, and pluripotent differentiation ability in vitro and in teratoma assays. Overall, the results presented here demonstrate that human iPSCs can be generated and maintained under strict xeno-free conditions and provide a path to good manufacturing practice (GMP) applicability that should facilitate the clinical translation of iPSC-based therapies.
Regulation of prostaglandin synthesis and of the selective release of lysosomal hydrolases by mouse peritoneal macrophages (1978)

Macrophages isolated from the peritoneal cavity of untreated mice and maintained in tissue culture synthesize and release prostaglandins when challenged with zymosan. These cells also selectively release lysosomal acid hydrolases under the same conditions. The major prostaglandins released into the media are found to be prostaglandins E1, E2 and 6-oxoprostaglandin F1a, whereas prostaglandin F2a is not detected. Macrophages isolated from mice that have received an intraperitoneal injection of thioglycollate broth are far less responsive to zymosan challenge. These cells require 300 microgram of zymosan to synthesize and release one-third the amount of prostaglandins released from non-stimulated macrophages exposed to 50 microgram of zymosan. In addition, thioglycollate-stimulated macrophages release less than 10% of their lysosomal acid hydrolases when exposed to 300 microgram of zymosan whereas non-stimulated cells release approximately 50% of these enzymes after treatment with 50 microgram of zymosan. The zymosan-stimulated synthesis and release of prostaglandins are completely inhibited by indomethacin, whereas the increased selective release of lysosomal acid hydrolases is not affected. Macrophages, unlike fibroblasts, do not synthesize and release prostaglandins when exposed to serum or to bradykinin.
PHYSIOLOGICAL RESPONSE TO PROPRANOLOL AND DIAZEPAM IN CHRONIC ANXIETY (1974)

1 Twelve chronically anxious psychiatric out-patients, comprising six with somatic anxiety and six with psychic anxiety, were treated with (±)-propranolol, diazepam and placebo for one week each in flexible dosage using a balanced cross-over experimental design. 2 After each treatment, in addition to ratings completed by patient and psychiatrist, finger tremor, EEG, averaged auditory evoked response, skin conductance, heart and respiratory rate were measured. 3 Diazepam significantly increased the amount of fast activity (13.5-26 Hz) in the EEG but produced few peripheral effects apart from a reduction in finger tremor. 4 Propranolol had no central physiological effects but reduced both pulse rate and finger tremor. 5 The physiological effects of propranolol in chronic anxiety are different from those of diazepam and therapeutic benefit appears to be due to a direct effect on certain somatic symptoms.
Lipid-induced ER stress in yeast and β cells: parallel trails to a common fate (2010)

Exposure to long-chain saturated fatty acids (SFAs; e.g. palmitate) induces apoptosis in pancreatic β cells, a process that may contribute to the development of type 2 diabetes. Under palmitate treatment, β cells undergo a so-called endoplasmic reticulum (ER) stress that can be counteracted by the unfolded protein response (UPR). The UPR is a coordinated response, which is primarily devoted to helping the ER to cope with the accumulation of misfolded proteins. Sustained SFA exposure may ultimately overwhelm the UPR, resulting in cell death. By contrast, unsaturated fatty acids (e.g. oleate) are much less harmful to the cells and can even alleviate palmitate toxicity. Surprisingly, recent evidences indicate that a simple unicellular eukaryote, the budding yeast Saccharomyces cerevisiae, which is not routinely exposed to high-fat diets, also undergoes ER stress under lipotoxic conditions. This suggests that the mechanisms of SFA toxicity are largely conserved throughout eukaryotes and are not specific of a given cell type. The present review discusses the mechanisms of SFA toxicity in yeast and β cells, with a main emphasis on their potential impacts on ER-membrane organization/function and ER-based processes.
Environmental Effects on Cracking and Delamination of Dielectric Films (2004)

The effects of temperature and moisture on the adhesive and cohesive strength of dielectric materials and the interfaces that are composed of those materials commonly found in thin-film interconnect structures are reviewed. Debond growth rate versus debond driving energy curves (V-G curves) were collected over a range of environmental conditions for both dielectrics and dielectric/metal interfaces. Both are found to exhibit characteristics consistent with stress corrosion cracking mechanisms found in the bulk glass literature. The mechanisms identified in both systems are explained in terms of the salient chemical reactions occurring at the debond tip.
Characterization of Thermophilic Archaeal Isopentenyl Phosphate Kinases (2009)

Archaea synthesize isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), the essential building blocks of isoprenoid compounds, from mevalonate (MVA). However, an analysis of the genomes of several members of the Archaea failed to identify genes for the enzymes required to convert phosphomevalonate (PM) to IPP in eukaryotes. The recent discovery of an isopentenyl kinase (IPK) in Methanocaldococcus jannaschii (MJ) suggests a new variation of the MVA pathway where PM is decarboxylated to give isopentenyl phosphate (IP), which is phosphorylated to produce IPP. A blast search using the MJ protein as a probe revealed a subfamily of amino acid kinases that include the fosfomycin resistance protein fomA, which deactivates the antibiotic by phosphorylation of its phosphonate residue in a reaction similar to the conversion of IP to IPP. IPK genes were cloned from two organisms identified in the search, Methanothermobacter thermautotrophicus (MTH) and Thermoplasma acidophilum (THA), and the His-tagged recombinant proteins were purified by Ni-NTA chromatography. The enzymes catalyze the reversible phosphorylation of IP by ATP, K(eq) = 6.3 +/- 1. The catalytic efficiencies (V/K) of the proteins were approximately 2 x 10(6) M(-1) s(-1). In the reverse direction, ADP was a substrate inhibitor for THA IPK, K(i)(ADP) = 58 +/- 6 microM, but not for MTH IPK. Both enzymes were active over a broad range of pH and temperature. Five compounds, dimethylallyl phosphate, isopentenyl thiolophosphate, 1-butyl phosphate, 3-buten-1-yl phosphate, and geranyl phosphate, were evaluated as alternative substrates for the MTH and THA IP kinases. All of the compounds were phosphorylated, although the catalytic efficiency was low for geranyl phosphate.
The text mining handbook: advanced approaches in analyzing unstructured data (2007)

1. Introduction to text mining 2. Core text mining operations 3. Text mining preprocessing techniques 4. Categorization 5. Clustering 6. Information extraction 7. Probabilistic models for Information extraction 8. Preprocessing applications using probabilistic and hybrid approaches 9. Presentation-layer considerations for browsing and query refinement 10. Visualization approaches 11. Link analysis 12. Text mining applications Appendix Bibliography.
The potential of PDE4 inhibitors in asthma or COPD. (2000)

At least 11 families of distinct phosphodiesterase (PDE) isoenzymes are known to regulate the function of many cells secondary to altering the intracellular levels of second messengers including cyclic 3'5-monophosphate (cyclic AMP) and cyclic 3'5 guanosine monophosphate (cyclic GMP). While there is a wide distribution of these enzymes throughout the body, it is of interest that inflammatory cells thought to participate in the pathogenesis of inflammatory diseases including asthma and chronic obstructive pulmonary disease (COPD), preferentially express PDE4. This finding has stimulated the search for highly selective inhibitors of these enzymes. Unfortunately, PDE4 inhibitors tend to be associated with a number of unwanted side effects including headache and emesis. However, attempts have been made through rational drug design to synthesize compounds that demonstrate improved side effect profile. Such drugs offer an exciting opportunity to selectively downregulate inflammatory cell function as a novel therapeutic approach in the treatment of airway disease.
NKG2D ligands as therapeutic targets. (2013)

The Natural Killer Group 2D (NKG2D) receptor plays an important role in protecting the host from infections and cancer. By recognizing ligands induced on infected or tumor cells, NKG2D modulates lymphocyte activation and promotes immunity to eliminate ligand-expressing cells. Because these ligands are not widely expressed on healthy adult tissue, NKG2D ligands may present a useful target for immunotherapeutic approaches in cancer. Novel therapies targeting NKG2D ligands for the treatment of cancer have shown preclinical success and are poised to enter into clinical trials. In this review, the NKG2D receptor and its ligands are discussed in the context of cancer, infection, and autoimmunity. In addition, therapies targeting NKG2D ligands in cancer are also reviewed.
A coding scheme for m-out-of-n codes (1990)

A scheme for the construction of m-out-of-n codes based on the arithmetic coding technique is described. For appropriate values of n, k, and m, the scheme can be used to construct an (n,k) block code in which all the codewords are of weight m. Such codes are useful, for example, in providing perfect error detection capability in asymmetric channels such as optical communication links and laser disks. The encoding and decoding algorithms of the scheme perform simple arithmetic operations recursively, thereby facilitating the construction of codes with relatively long block sizes. The scheme also allows the construction of optimal or nearly optimal m-out-of-n codes for a wide range of block sizes limited only by the arithmetic precision used.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">&gt;</ETX>
The Parkes multi-beam pulsar survey - I. Observing and data analysis systems, discovery and timing of 100 pulsars (2001)

The Parkes multi-beam pulsar survey is a sensitive survey of a strip along the Galactic plane with jbj , 58 and l 2608 to l 508. It uses a 13-beam receiver on the 64-m Parkes radio telescope, receiving two polarizations per beam over a 288-MHz bandwidth centred on 1374 MHz. The receiver and data acquisition systems are described in some detail. For pulsar periods in the range 0:1-2 s and dispersion measures of less than 300 cm 23 pc, the nominal limiting flux density of the survey is about 0.2 mJy. At shorter or longer periods or higher dispersions, the sensitivity is reduced. Timing observations are carried out for pulsars discovered in the survey for 12-18 months after confirmation to obtain accurate positions, spin parameters, dispersion measures, pulse shapes and mean flux densities. The survey is proving to be extremely successful, with more than 600 pulsars discovered so far. We expect that, when complete, this one survey will come close to finding as many pulsars as all previous pulsar surveys put together. The newly discovered pulsars tend to be young, distant and of high radio luminosity. They will form a valuable sample for studies of pulsar emission properties, the Galactic distribution and evolution of pulsars, and as probes of interstellar medium properties. This paper reports the timing and pulse shape parameters for the first 100 pulsars timed at Parkes, including three pulsars with periods of less than 100 ms which are members of binary systems. These results are briefly compared with the parameters of the previously known population.
Influence of phospholipids on the assessment of factor VIII activity (1998)

In view of reported discrepancies between different factor VIII assays, the influence of phospholipids on the performance of one-stage clotting (OS) and chromogenic substrate (CS) assays was evaluated. The B domain deleted recombinant factor VIII, rVIII SQ, two full-length recombinant products and a plasma derived factor VIII concentrate were each diluted into severe haemophilia A plasma and assayed against a plasma standard. The one-stage activity was 50, 80, 75 and 106%, respectively, of the chromogenic result. Variations in the phospholipid concentration did not affect the chromogenic assay, except at very low levels where the apparent activity increased. In contrast, dilution of the phospholipid reagent had a substantial influence on the activity measured by OS assays, especially in the case of rVIII SQ. At low levels of phospholipid, the one-stage activity of rVIII SQ exceeded the chromogenic result. When mixtures of phosphatidylserine (PS) and phosphatidyl-choline (PC) were used as a source of phospholipid, the OS results for rVIII SQ agreed well with the CS activity as long as the content of PS was below 10%, i.e., closer to the physiological level. At higher levels of PS, as in most commercial APTT reagents, the OS activity decreased. When the APTT reagent was replaced by platelets in the OS assay, the results compared well with those obtained by the CS assay for both t-VIII SQ and full-length factor VIII products.
Detecting music in ambient audio by long-window autocorrelation (2008)

We address the problem of detecting music in the background of ambient real-world audio recordings such as the sound track of consumer-shot video. Such material may contain high levels of noises, and we seek to devise features that will reveal music content in such circumstances. Sustained, steady musical pitches show significant, structured autocorrelation at when calculated over windows of hundreds of milliseconds, where autocorrelation of aperiodic noise has become negligible at higher-lag points if a signal is whitened by LPC. Using such features, further compensated by their long-term average to remove the effect of stationary periodic noise, we produce GMM and SVM based classifiers with high performance compared with previous approaches, as verified on a corpus of real consumer video.
The role of thrombosis in severe pulmonary hypertension (1996)

Considering the important surface in pulmonary circulation where blood can interact with the endothelium, the maintenance of blood fluidity through the lung, by antithrombotic pathways and products of the endothelium, is essential. This function appears to be ineffective in primary pulmonary hypertension and in severe secondary pulmonary hypertension. Thrombotic lesions are frequently found in pulmonary arteries in these diseases. Thrombin activity appears to be increased in severe pulmonary hypertension. Antithrombotic pathway disorders may account for this abnormality, particularly in chronic thromboembolic pulmonary hypertension and primary pulmonary hypertension. Injured endothelium, a constant feature in severe pulmonary hypertension, either primary or secondary, enhances thrombus formation in pulmonary vessels. This is probably related to thrombomodulin and tissue factor imbalance, impairment of prostacyclin and nitric oxide release, as well as inefficiency of fibrinolysis. Moreover, platelets appear to be activated in the pulmonary circulation of these patients. They release several mediators acting on vascular tone and as mitogenic agents, and may also contribute to thrombin and clot generation. Long-term oral anticoagulant and continuous infusion of prostacyclin, treatments which impede thrombosis, are known to improve the survival rate in patients with primary pulmonary hypertension. These are the strongest arguments, so far, in favour of the role of thrombosis in severe pulmonary hypertension. However, we do not know whether these abnormalities result from a previous vascular injury or represent the primary disturbance.