gebhart/patrepeval huggingface dataset:
Formation of meizothrombin as intermediate in factor Xa-catalyzed prothrombin activation on endothelial cells. The influence of thrombin on the reaction mechanism (1991)

Incubation of prothrombin on cultured human umbilical vein endothelial cells with factor Xa and calcium ions induced the activation of prothrombin. The mechanism of prothrombin activation was analyzed on sodium dodecyl sulfate gels using immuno- and amido-blotting techniques. It was demonstrated that meizothrombin was formed as an intermediate in prothrombin activation on the endothelial cell surface. In addition, considerable amounts of meizothrombin des-fragment-1 accumulated during prothrombin activation and were not further converted to thrombin. Although preincubation of the endothelial cells with thrombin did not influence the formation of meizothrombin, addition of hirudin to the prothrombin activation mixture inhibited the formation of meizothrombin and meizothrombin des-fragment-1 almost completely. This indicated that the activity of endogenously formed thrombin influenced the formation of meizothrombin via a feedback mechanism. The increased formation of meizothrombin and accumulation of meizothrombin des-fragment-1 in a latter phase of prothrombin activation points to a regulatory mechanism in hemostasis which subdues the formation of the procoagulant alpha-thrombin.
Regenerative and other responses to injury in the retinal stump of the optic nerve in adult albino rats: transection of the intracranial optic nerve. (1994)

The response to injury of the proximal (retinal) stump of the intracranially transected optic nerve in adult rats has been studied by electron microscopy. The central part of the retinal stump of the optic nerve underwent severe ischaemic damage resulting in the formation by 3 days postoperation (dpo) of a cone-shaped region of necrotic tissue which extended from a base occupying most of the cross-sectional area of the nerve at the cut end to an apex within the intraorbital part of the nerve and only 2-3 mm from the eyeball. A mixture of apparently viable and dead or dying cells and axons was present in an intermediate zone surrounding the ischaemic core. Apparently intact nerve fibres occupied most of the periphery of the optic nerve. Small bundles of sprout-like axons were seen in the intermediate zone at 3 dpo, and by 5 dpo such sprouts were present at the periphery of the degenerative core. By 7 dpo, the sprouts were also found in the centre of the degenerative core, accompanied by astrocyte processes. The number of axonal sprouts present in the degenerative core and intermediate zone was much higher at 2 and 4 wk postoperation (wpo) than at 7 dpo, then declined gradually by 6 and 8 wpo. These results show that intracranial transection of the rat optic nerve produces extensive degeneration in the proximal stump and effectively produces an intraorbital axotomy of many retinal ganglion cells. Nevertheless, surviving axons display the ability to produce regenerative sprouts which persist for considerably longer than those produced after intraorbital injury.
Effects of antibody disulfide bond reduction on purification process performance and final drug substance stability (2017)

Antibody disulfide bond reduction during monoclonal antibody (mAb) production is a phenomenon that has been attributed to the reducing enzymes from CHO cells acting on the mAb during the harvest process. However, the impact of antibody reduction on the downstream purification process has not been studied. During the production of an IgG<sub>2</sub> mAb, antibody reduction was observed in the harvested cell culture fluid (HCCF), resulting in high fragment levels. In addition, aggregate levels increased during the low pH treatment step in the purification process. A correlation between the level of free thiol in the HCCF (as a result of antibody reduction) and aggregation during the low pH step was established, wherein higher levels of free thiol in the starting sample resulted in increased levels of aggregates during low pH treatment. The elevated levels of free thiol were not reduced over the course of purification, resulting in carry-over of high free thiol content into the formulated drug substance. When the drug substance with high free thiols was monitored for product degradation at room temperature and 2-8°C, faster rates of aggregation were observed compared to the drug substance generated from HCCF that was purified immediately after harvest. Further, when antibody reduction mitigations (e.g., chilling, aeration, and addition of cystine) were applied, HCCF could be held for an extended period of time while providing the same product quality/stability as material that had been purified immediately after harvest. Biotechnol. Bioeng. 2017;114: 1264-1274. © 2017 The Authors. Biotechnology and Bioengineering Published by Wiley Periodicals Inc.
Lectin-mediated aggregation of liposomes containing glycolipids with variable hydrophilic spacer arms (1980)

Synthetic glycolipids containing a cholesterol anchor group attached via a spacer group to a sugar moiety can be incorporated into small unilamellar liposomes, rendering them susceptible to agglutination by the appropriate multivalent lectin [Rando, R. R., Orr, G. A., & Bangerter, F. W. (1979) J. Biol. Chem. 254, 8318-8323; Rando, R. R., & Bangerter, F. W. (1979) J. Supramol. Struct. 11, 295-309]. We report here on the role of spacer arm length in rendering these liposomes susceptible to agglutination. In order to eliminate the ambiguities inherent in using hydrophobic or charged spacer groups, we have synthesized a hydrophilic, ethylene glycol based amino acid (8-amino-3,6-dioxaoctanoic acid) for these studies. The Ricinus communis agglutinin (ricin) mediated agglutination of these beta-galactoside-containing glycolipids was studied. A spacer arm length of four atoms will not support agglutination under any conditions. A seven-atom spacer will support agglutination, but only at high phospholipid concentrations (0.24 mumol/mL) with a pseudo-first-order rate of agglutination of 0.0079 min-1. With 13 and 22 atom spacer groups, the pseudo-first-order rate constants were 0.4 min-1 and 1.3 min-1, respectively, at a phospholipid concentration of 0.06 mumol/mL. Under conditions where the liposomes containing the glycolipid with the 13-atom hydrophilic spacer arm were completely agglutinated by ricin, 9.3% of the total available sugar moieties of the liposome were bound to ricin. This means that, on the average, 38 interliposomal bonds were formed in an aggregate.
Natural history of uterine leiomyomas in pregnancy. (1994)

A prospective study was conducted over a 6 year period to determine the natural history of uterine leiomyomas in pregnancy. All pregnant women with myomas detected during obstetric ultrasonographic examination and with three or more sonographic examinations were included; 134 patients fulfilled the inclusion criteria. Sonograms were obtained at 2 week intervals until 20 weeks of gestation, and monthly thereafter. The following observations were made: (1) the majority of myomas 5 cm or less in average diameter could no longer be seen during pregnancy; (2) the majority of myomas greater than 5 cm in diameter tended to remain stable or decrease in size during pregnancy; and (3) multiple myomas were less likely to disappear than solitary myomas.
<title>Conceptual Design Of A Spaceborne Lightning Sensor</title> (1980)

A broad-area optical lightning telescope sensor (BOLTS) has been designed to provide full-time (day/night) coverage of the continental United States from a geosynchronous orbit. The average ground resolution will be 8 km and the probability of detecting 107 watt lightning strokes will be 0.9 with a false alarm rate (FAR) of 0.1. The system&apos;s requirements and constraints are presented together with the design rationale. Contrast enhancement is achieved with a fast refractive optical system incorporating a relatively narrow bandpass interference filter. The focal plane is an 800 x 800 pixel CCD array, electronically subdivided to allow for the high data rates (1000 frames per sec) imposed by the short duration and random occurrence of lightning flashes. A subtraction algorithm using similar CCD arrays as buffer memory provides the cluttered background filtration. The emerging data are subjected to a threshold test, and signals above threshold are encoded with respect to time, location, and intensity, and are transmitted to the ground station. Variations of this system are discussed that could cover the whole globe from several geo-synchronous satellites or that could cover a smaller U.S. area with a higher resolution.
Production of Diesel-Like Fuel and Other Value-Added Chemicals from Pyrolysis of Animal Fat (2005)

Pyrolysis of lard was performed in a fixed-bed reactor to produce a diesel-like fuel. Lard was fed into the reactor at 5 g/h using N2 (3 × 10-5−7 × 10-5 m3/min) as carrier gas. The liquid product obtained at a temperature of 600 °C, carrier gas flow rate of 5 × 10-5 m3/min, and quartz packing particle size of 0.7−1.4 mm has a cetane index of 46, specific gravity of 0.86, and a higher heating value of 40 MJ/kg. This study shows that there is a potential for producing diesel-like liquid from pyrolysis of lard. It also identifies the pyrolysis of animal fats as a source of high-calorific-value (68−165 MJ/m3) gaseous fuel.
Respiration can be monitored by photoplethysmography with high sensitivity and specificity regardless of anaesthesia and ventilatory mode (2005)

A respiratory synchronous variation in PPG and all invasive pressure signals was detected. The reflection mode PPGr signal seemed to be a constant phenomenon related to respiration regardless of whether or not the subject was awake, anaesthetized or ventilated, which increases its clinical usefulness in respiratory monitoring.
Differentiating Full-Spectrum Hemp Extracts from CBD Isolates: Implications for Policy, Safety and Science (2020)

The passage of the 2018 United States Agriculture Improvement Act removed industrial hemp, defined as <i>Cannabis sativa</i> L. containing less than 0.3% THC content by dry weight, from Schedule I of the Controlled Substances Act and made it an agricultural commodity. Following these changes, the popularity of hemp-derived cannabidiol (CBD) dietary supplements by consumers has greatly exceeded the scientific understanding of purported benefits, safety and composition of these botanical extracts. Further complicating CBD hemp supplement regulation, Food and Drug Administration (FDA) considers CBD to be an approved drug (Epidiolex) in the treatment of severe epilepsy disorders, Dravet and Lennox-Gastaut syndromes. At the same time, hemp-derived CBD supplements can contain a complex phytochemical matrix from the hemp plant, distinguishing the composition of these products from isolated CBD preparations. This work aims to provide clarity on differentiating botanical full-spectrum hemp extracts containing CBD from isolates, from a phytochemical, toxicological and regulatory perspective.
Decreased Src tyrosine kinase activity inhibits malignant human ovarian cancer tumor growth in a nude mouse model. (1999)

The Src protein tyrosine kinase is overexpressed and activated in a number of human cancers, including some human ovarian cancers. To determine whether Src activity plays a role in ovarian tumor growth, stable derivatives of the SKOv-3 human ovarian cancer cell line that exhibited reduced Src tyrosine kinase activity were generated by transfection with an antisense c-src construct. Comparison of these cell lines with parental SKOv-3 cells and stable sense c-src vector-transfected control lines revealed no phenotypic alterations in anchorage-dependent proliferation, adherence, density saturation, or wound migration. However, reduction in Src activity was associated with altered cellular morphology, dramatically reduced anchorage-independent growth, and, when assessed for tumor development in a xenograft nude mouse model, diminished tumor growth. Furthermore, reduction of Src activity in the antisense c-src cell lines was associated with reduced vascular endothelial growth factor mRNA expression in vitro, and tumors derived from these cell lines displayed a phenotype indicative of abortive microvessel vascularization. These results strongly suggest that Src is involved in critical oncogenic pathways that modulate tumor growth from this ovarian cell line. Furthermore, this evidence suggests that as in other tumor systems, Src activity is required for vascular endothelial growth factor induction and angiogenic development.
Differences in inhibition of the growth of commensal and enteropathogenic strains of Escherichia coli by lactotransferrin and secretory immunoglobulin A isolated from human milk. (1980)

Immunoglobulins from bovine and human colostrum and milk and lactotransferrin (LTF) from human milk were investigated for bacteriostatic activity against Escherichia coli growing in a tissue culture medium. When tested separately, LTF or secretory immunoglobulin A (sIgA) from pooled human milk showed only slight bacteriostatic activity against human commensal or enteropathogenic strains of E. coli. Together, they had a considerable bacteriostatic effect, but only against strains of enteropathogenic serotype. This activity of the sIgA from pooled human milk was consistent for all enteropathogenic serotypes tested, but sIgA isolated from individual milk samples was inactive against some serotypes, and this specificity was associated with antibody to the O antigens. The activity of the sIgA was stable to heat at 56 degrees for 2 h but was lost progressively on heating at 65 degrees for 10 min or longer. Bovine colostral IgGl was without bacteriostatic effect alone. Together with LTF, it was active against a strain pathogenic to calves but not against human enteropathogenic strains. Tests on rabbit antisera raised against commensal enteropathogenic strains of E. coli showed that for the enteropathogens the bacteriostatic activity (in association with LTF) was high and was specific for the serotype of the eliciting strain, but bacteriostatic activity was low or absent in the antisera to commensal strains in spite of the presence of high titres of agglutinating antibodies to these strains.
Hippocampal tau pathology is related to neuroanatomical connections: an ageing population-based study (2009)

Deposits of abnormally phosphorylated tau protein are found in numerous neurodegenerative disorders; the 'tauopathies', which include Alzheimer's and Pick's diseases, but tau pathology is also found in the ageing brain. Variation in tau pathology in brain ageing and its relationship to development of tauopathies and cognitive impairment remains unclear. We aimed to determine the extent and pattern of spread of tau pathology in the hippocampus, a susceptible region important in dementia and milder states of memory impairment, using hippocampal samples from the elderly population-based Medical Research Council Cognitive Function and Ageing Study neuropathology cohort. Tau deposition was assessed in hippocampal anatomical sub-regions using the AT8 antibody to phosphorylated tau and isoform-specific antibodies to 3 and 4-repeat tau (RD3 and RD4). Abeta pathology was also assessed. In this population sample, which includes the full ageing spectrum from individuals with no cognitive impairment to those with dementia satisfying clinico-pathology criteria for Alzheimer's disease, we have demonstrated a high prevalence at death of tau pathology. AT8, Abeta, RD3 and RD4 showed similar regional distribution and increased RD3 was noted in late-stage ghost tangles. Abeta was shown to be a poor explanatory variable for tau pathology. Tau deposition progressed in a hierarchical manner. Hippocampal input regions and projection zones (such as lateral entorhinal cortex, CA1/subiculum border and outer molecular layer of dentate) were initially affected, with anterograde progression though the hippocampal circuitry. Six hippocampal tau anatomical stages were defined, each linking projectionally to their adjacent stages, suggesting spread of tau malfunction through neuroanatomical pathways in hippocampal ageing. These stages were significantly associated with dementia, and may provide a clinically useful tool in the clinico-pathological assessment of dementia and mild cognitive impairment.
Is There Life After the SSC? (1993)

High-energy physicists were counting on the Superconducting Super Collider to jump-start a field that had stalled. The project's surprise defeat has left them with few good alternatives. This article describes other high-energy physics projects being conducted, and projects to be constructed and carried out in the future. The loss of the SSC damages the United States' international reputation in high-energy physics, and the article concludes that the future for US high-energy research is bleak.
Phase aberration correction and motion compensation for ultrasonic hyperthermia phased arrays: experimental results (1994)

In ultrasound hyperthermia, focal patterns generated by phased arrays can be degraded by phase errors due to tissue inhomogeneities, digitization of the driving signals, and imperfect fabrication of the transducers. The degree of degradation depends on the severity of phase aberrations. As predicted by simulation and verified by experimental results, focal degradation scales with the circular variance of phase errors. However, degraded power deposition patterns can be significantly improved after phase aberration correction, especially where patterns are complicated and the aberrations are severe. Also, as shown in motion compensation experiments, an aberration corrected pattern can be particularly sensitive to aberrator movement greater than the correlation length of the aberrator. After motion compensation, new sharply focused patterns can be accomplished, thus reducing the unwanted influence of "body" movement by stabilizing the positions of foci with respect to patient anatomy.< <ETX xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">&gt;</ETX>
["Double-blind" clinical study of a non-steroid anti-inflammatory drug: glucametacine]. (1980)

A double blind clinical study has been carried out with two non-steroid anti-inflammatory drugs, glucametacine and phenylbutazone in 40 patients suffering from inflammatory and degenerative type arthrorheumopathies, selected and randomised into two groups. Examination of results shows the greater effectiveness of glucametacine (78%)over phenylbutazone (60%). Glucametacine was also statistically (p < 0,05) better from the tolerance point of view.
A Case–Control Study of Chorioamnionic Infection and Histologic Chorioamnionitis in Prematurity (1988)

To study the role of infection in prematurity, we studied the demographic and obstetrical characteristics, chorioamnionic cultures, and placental histologic features of women who delivered prematurely and compared these findings with those in women who delivered at term. Microorganisms were isolated from the area between the chorion and the amnion (chorioamnion) in 23 of 38 placentas (61 percent) from women with preterm labor who delivered before 37 weeks' gestation and in 12 (21 percent) of 56 placentas from women without preterm labor who delivered at term (odds ratio, 5.6; 95 percent confidence interval, 2.1 to 15.6). The most frequent isolates from the placentas of those whose infants were delivered prematurely were Ureaplasma urealyticum (47 percent) and Gardnerella vaginalis (26 percent). The recovery of any organism from the chorioamnion was strongly associated with histologic chorioamnionitis (odds ratio, 7.2; 95 percent confidence interval, 2.7 to 19.5) and with bacterial vaginosis (odds ratio, 3.2; 95 percent confidence interval, 1.1 to 6.6). When multiple logistic regression was used to control for demographic and obstetrical variables, premature delivery was still related to the recovery of organisms from the chorioamnion (odds ratio, 3.8; 95 percent confidence interval, 1.5 to 9.9) and with chorioamnionitis (odds ratio, 5.0; 95 percent confidence interval, 1.6 to 15.3). The proportion of placentas with evidence of infection was highest among those who delivered at the lowest gestational age. We conclude that infection of the chorioamnion is strongly related to histologic chorioamnionitis and may be a cause of premature birth.
Malignant mouse melanoma cells do not form tumors when mixed with cells of a non‐malignant subclone: Relationships between plasminogen activator expression by the tumor cells and the host's immune response (1978)

Mouse melanoma clones B559 and B78 are highly tumorigenic when injected into C57BL/6J mice. Tmor formation by these cells is suppressed when they are mixed with nonmalignant bromodeoxyuridine-grown clone C3471 before injection. C3471 cells suppress tumor formation only in immunocompetent hosts; mixtures of B559 and C3471 cells or C3471 cells alone form tumors in antithymocyte serum (ATS)-treated mice. Explants of C3471 tumors grown in ATS-treated mice form tumors in immunocompetent mice, most of which regress. Inability of C3471 or mixtures of C3471 with malignant cells to grow in normal mice, as contrasted with ability to grow in immunosuppressed mice, indicates that host response is involved. Both tumorigenic clones have high plasminogen activator activity, whereas nontumorigenic clone C3471 has none. Mixture of either tumorigenic clone with C3471 cells decreases plasminogen activator in vitro. C3471 tumor explants from ATS-treated mice initially express plasminogen activator, but lose the capacity to express this activity upon prolonged cultivation in vitro. Explants from B559 tumors retain plasminogen activator in long term culture. Close physical contact between C3471 and B559 cells appears essential both for inhibiton of plasminogen activator expression by B559 cells in vitro, and for tumor suppression in vivo. These findings suggest that production of plasminogen activators by tumor cells may play an important role in suppressing the host's immune response locally to an inoculum of syngeneic tumor cells.
Arachidonic Acid Is Preferentially Metabolized by Cyclooxygenase-2 to Prostacyclin and Prostaglandin E2 (1999)

The two cyclooxygenase isoforms, cyclooxygenase-1 and cyclooxygenase-2, both metabolize arachidonic acid to prostaglandin H2, which is subsequently processed by downstream enzymes to the various prostanoids. In the present study, we asked if the two isoforms differ in the profile of prostanoids that ultimately arise from their action on arachidonic acid. Resident peritoneal macrophages contained only cyclooxygenase-1 and synthesized (from either endogenous or exogenous arachidonic acid) a balance of four major prostanoids: prostacyclin, thromboxane A2, prostaglandin D2, and 12-hydroxyheptadecatrienoic acid. Prostaglandin E2 was a minor fifth product, although these cells efficiently converted exogenous prostaglandin H2 to prostaglandin E2. By contrast, induction of cyclooxygenase-2 with lipopol- ysaccharide resulted in the preferential production of prostacyclin and prostaglandin E2. This shift in product profile was accentuated if cyclooxygenase-1 was permanently inactivated with aspirin before cyclooxygenase-2 induction. The conversion of exogenous prostaglandin H2 to prostaglandin E2 was only modestly increased by lipopolysaccharide treatment. Thus, cyclooxygenase-2 induction leads to a shift in arachidonic acid metabolism from the production of several prostanoids with diverse effects as mediated by cyclooxygenase-1 to the preferential synthesis of two prostanoids, prostacyclin and prostaglandin E2, which evoke common effects at the cellular level.