gebhart/patrepeval huggingface dataset:
Functional self-association of von Willebrand factor during platelet adhesion under flow (2001)

We have used recombinant wild-type human von Willebrand factor (VWF) and deletion mutants lacking the A1 and A3 domains, as well as specific function-blocking monoclonal antibodies, to demonstrate a functionally relevant self-association at the interface of soluble and surface-bound VWF. Platelets perfused at the wall shear rate of 1,500 s(-1) over immobilized VWF lacking A1 domain function failed to become tethered to the surface when they were in a plasma-free suspension with erythrocytes, but adhered promptly if soluble VWF with functional A1 domain was added to the cells. The same results were observed when VWF was immobilized onto collagen through its A3 domain and soluble VWF with deleted A3 domain was added to the cells. Thus, VWF bound to glass or collagen sustains a process of homotypic self-association with soluble VWF multimers that, as a result, can mediate platelet adhesion. The latter finding demonstrates that direct immobilization on a substrate is not a strict requirement for VWF binding to platelet glycoprotein Ibalpha. The dynamic and reversible interaction of surface-bound and soluble VWF appears to be specifically homotypic, because immobilized BSA, human fibrinogen, and fibronectin cannot substitute for VWF in the process. Our findings highlight a newly recognized role of circulating VWF in the initiation of platelet adhesion. The self-assembly of VWF multimers on an injured vascular surface may provide a relevant contribution to the arrest of flowing platelets opposing hemodynamic forces, thus facilitating subsequent thrombus growth.
The Urokinase Plasminogen Activator System: A Target for Anti-Cancer Therapy (2009)

The urokinase plasminogen activator (uPA) system (uPAS) consists of the uPA, its cognate receptor (uPAR) and two specific inhibitors, the plasminogen activator inhibitor 1 (PAI-1) and 2 (PAI-2). The uPA converts the proenzyme plasminogen in the serine protease plasmin, involved in a number of physiopathological processes requiring basement membrane (BM) and/or extracellular matrix (ECM) remodelling, including tumor progression and metastasis. Data accumulated over the past years have made increasingly clear that the uPAS has a multifunctional task in the neoplastic evolution, affecting tumor angiogenesis, malignant cell proliferation, adhesion and migration, intravasation and growth at the metastatic site. In agreement with their role in cancer progression and metastasis, an increased expression of uPA, uPAR, and PAI-1 has been documented in several malignant tumors, and a positive correlation between the levels of one or more uPAS members and a poor prognosis has been frequently reported. This is particularly evident in breast cancer, for which uPA has been demonstrated to be the most potent independent prognostic factor described to date. The involvement of the uPAS in cancer progression identifies its components as suitable targets for anti-cancer therapy. Several therapeutical approaches aimed at inhibiting the uPA/uPAR functions have been shown to possess anti-tumor effects in xenograft models, including selective inhibitors of uPA activity, antagonist peptides, monoclonal antibodies able to prevent uPA binding to uPAR and gene therapy techniques silencing uPA/uPAR expression. All these strategies, however, although promising, need definitive confirmation in humans as, up to now, only few uPA inhibitors entered clinical trial.
Hard metal asthma: cross immunological and respiratory reactivity between cobalt and nickel? (1990)

Eight asthmatic patients with hard metal asthma due to cobalt underwent bronchial provocation challenge with nickel sulphate. Seven patients developed a fall in FEV1 of 20% or more after inhaling nickel sulphate, four showing an immediate response and three a late response. Eight control subjects, including six asthmatic patients, with no history of hard metal exposure, showed no bronchoconstriction in response to a provocation challenge with nickel sulphate. Specific antibodies to nickel conjugated human serum albumin were present in four of the eight patients with sensitivity to cobalt conjugated human serum albumin but were absent from the serum of 60 unexposed asthmatic patients and 25 exposed symptom free workers. These results suggest that nickel as well as cobalt sensitivity plays a part in hard metal asthma.
CELLULAR ONCOGENES AND RETROVIRUSES (1983)

The Hippo pathway was initially discovered in Drosophila melanogaster as a key regulator of tissue growth. It is an evolutionarily conserved signaling cascade regulating numerous biological processes, including cell growth and fate decision, organ size ...Read More
Depression and the Link with Cardiovascular Disease (2016)

This review provides an outline of the association between major depressive disorder (MDD) and coronary heart disease (CHD). Much is known about the two individual clinical conditions; however, it is not until recently, biological mechanisms have been uncovered that link both MDD and CHD. The activation of stress pathways have been implicated as a neurochemical mechanism that links MDD and CHD. Depression is known to be associated with poorer outcomes of CHD. Psychological factors, such as major depression and stress, are now known as risk factors for developing CHD, which is as important and is independent of classic risk factors, such as hypertension, diabetes mellitus, and cigarette smoking. Both conditions have great socioeconomic importance given that depression and CHD are likely to be two of the three leading causes of global burden of disease. Better understanding of the common causal pathways will help us delineate more appropriate treatments.
Air pollution control by electrical discharges (2000)

Air pollution caused by gas emission of pollutants produced from a wide range of sources including coal, oil and gas burning power plants, diesel engines, paper mills, steel and chemical production plants must be reduced drastically and urgently, as mandated by recent worldwide national legislation which recently are being reinforced increasingly by international agreements. Non-thermal plasmas in which the mean energy of the electrons is substantially higher than that of the gas offer advantages in reducing the energy required to remove the pollutants. The electrical energy supplied into the discharge is used preferentially to create energetic electrons which are then used to produce radicals by dissociation and ionization of the carrier gas in which the pollutants are present. These radicals are used to decompose the pollutants. There are two technologically promising techniques for generating non-thermal plasmas in atmospheric gas pressure containing the pollutants, namely electron beam irradiation and electrical discharge techniques. Both techniques are undergoing intensive and continuous development worldwide. This is done to reduce the energy requirement for pollutant removal, and therefore the associated cost, as well as to obtain a better understanding of the physical and chemical processes involved in reducing the pollutants. In the present paper only electrical discharge techniques are reviewed and emphasis is given to the more recent published work. The paper summarizes the chemical reactions responsible for the removal of the major polluting constituents of NO, NO/sub 2/ and SO/sub 2/ encountered in flue gases and exhaust emissions. The constructional features of the various types of electrical discharge reactors commonly employed in the removal of gas pollutants as well as pilot systems used in industrial plants are described briefly The results on the removal efficiency of the various pollutants including hydrocarbons and volatile compounds and their dependency on the type of discharge reactor, the type and the magnitude of the applied voltage (dc, ac and pulsed), the polarity of the voltage (de and pulsed), the effect of the pulse width, the initial concentration of the pollutants, the addition of ammonia, argon and other hydrocarbons, the gas flow rate, the residence time of the pollutants in the discharge reactor, the gas temperature and on the type of the gas constituents will be reviewed. The removal of pollutants using arc plasmas will be discussed. The specific energy density which is supplied in various forms of electrical discharges to reduce the pollutants is discussed. The energy required to remove the pollutants is expected to be one of the main considerations in selecting the technology to be used to remove the pollutants and therefore it is of prime importance.
Solid-State NMR Studies of Self-Assembled Monolayers (1995)

ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTSolid-State NMR Studies of Self-Assembled MonolayersWei Gao and Linda RevenCite this: Langmuir 1995, 11, 6, 1860–1863Publication Date (Print):June 1, 1995Publication History Published online1 May 2002Published inissue 1 June 1995https://pubs.acs.org/doi/10.1021/la00006a007https://doi.org/10.1021/la00006a007research-articleACS PublicationsRequest reuse permissionsArticle Views1114Altmetric-Citations111LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose Get e-Alerts
Transport in lymphatic capillaries. I. Macroscopic measurements using residence time distribution theory (1996)

We present a novel integrative method for characterizing transport in the lymphatic capillaries in the tail of the anesthetized mouse, which is both sensitive and reproducible for quantifying uptake and flow. Interstitially injected, fluorescently labeled macromolecules were used to visualize and quantify these processes. Residence time distribution (RTD) theory was employed to measure net flow velocity in the lymphatic network as well as to provide a relative measure of lymphatic uptake of macromolecules from the interstitium. The effects of particle size and injection pressure were determined. The uptake rate was found to be independent of particle size in the range of a 6- to 18-nm radius; beyond this size, the interstitial matrix seemed to pose a greater barrier. A comparison of 10 vs. 40 cmH2O injection pressure showed a significant influence on the relative uptake rate but not on the net velocity within the network (3.3 +/- 0.8 vs. 3.8 +/- 1.0 micron/s). This suggested the presence of a systemic driving force for baseline lymph propulsion that is independent of the local pressure gradients driving the uptake. This model can be used to examine various aspects of transport physiology of the initial lymphatics.
Isolation and characterization of the transcriptionally regulated mouse liver (B-type) phosphofructokinase gene and its promoter (1991)

We have isolated and characterized a mouse gene encoding liver (B-type) phosphofructokinase, a key regulatory enzyme in glycolysis. The gene spans approximately 21.5 kilobase pairs and consists of 22 exons. Compared with the muscle (A-type) phosphofructokinase gene, the sizes of the introns are different although exon lengths are highly conserved. Two transcription start sites 10 bases apart were determined by primer extension experiments. The immediate 5' sequence does not possess a TATA or CCAAT box but contains multiple GC boxes (positions -10, -43, -50, -62, and +28 in the 5'-untranslated region) which may be Sp1-binding sites. An unusual feature of 200 base stretches of CT repeats is present at position -480 to -693. In addition, direct repeats of CTCGAAGGAG are found at positions -447 and -478. DNase I footprinting showed five regions where liver nuclear proteins may interact. Two proximal 5'-flanking regions spanning -1 to -20 and -30 to -70, which contain GC boxes. Also protected was a region spanning -70 to -90, which contains an AP-1 like sequence (TCAGTCA). The consensus AP-1 sequence, however, did not inhibit footprinting, indicating involvement of a distinct protein. Two distal regions spanning from -450 to -470 and from -500 to -520 were also protected. The former is positioned between the direct repeats and the latter is at the start of the CT repeats. The rate of transcription of the liver phosphofructokinase gene, as measured by run-on assays, increased 5-fold in livers of previously starved mice fed a high carbohydrate diet compared to starved controls. Administration of dibutyryl cAMP blocked the increase in transcription caused by refeeding. Functional analysis of the promoter region of the gene will be necessary to elucidate the mechanisms of transcriptional regulation by fasting/refeeding and by cAMP. These results provide a useful system for the study of regulatory elements in liver phosphofructokinase gene transcription.
The Antigens of Mycobacterium bovis, Strain BCG, Studied by Crossed Immunoelectrophoresis: a Reference System (1980)

A reference system for the soluble antigens of Mycobacterium bovis, strain BCG is described. The system is based on crossed immunoelectrophoresis with intermediate gel. A commercially available immunoglobulin preparation made from rabbit anti-BCG hyperimmune serum was used as reference antibodies, while a concentrated BCG culture filtrate was used as reference antigen. The pattern obtained was highly reproducible, and most of the components were stable when the fiftyfold-concentrated culture filtrate was stored at -20 degrees C. About thirty different antigenic components were selected as reference antigens and numbered. The majority of the reference antigens were present in extracts prepared from BCG by ultrasonication or bacterial press extraction. Use of the system for studies of antigenic relationship between mycobacteria, identification and quantification of antigens, and characterization of antimycobacterial antibodies are illustrated by examples. The antigens of two preparations of tuberculin purified protein derivative (PPD) were identified. The antigen designated BCG60 was found to be a najor constituent of tuberculin PPD. Evidence is presented that this antigen is cell wall associated.
Carbon-Catalyzed Gasification of Organic Feedstocks in Supercritical Water (1996)

Spruce wood charcoal, macadamia shell charcoal, coal activated carbon, and coconut shell activated carbon catalyze the gasification of organic compounds in supercritical water. Feedstocks studied in this paper include glycerol, glucose, cellobiose, whole biomass feedstocks (depithed bagasse liquid extract and sewage sludge), and representative Department of Defense (DoD) wastes (methanol, methyl ethyl ketone, ethylene glycol, acetic acid, and phenol). The effects of temperature, pressure, reactant concentration, weight hourly space velocity, and the type of catalyst on the gasification of glucose are reported. Complete conversion of glucose (22% by weight in water) to a hydrogen-rich synthesis gas was realized at a weight hourly space velocity (WHSV) of 22.2 h-1 in supercritical water at 600 °C, 34.5 MPa. Complete conversions of the whole biomass feeds were also achieved at the same temperature and pressure. The destruction efficiencies for the representative DoD wastes were also high. Deactivation of the carbon catalyst was observed after 4 h of operation without swirl in the entrance region of the reactor, but the carbon gasification efficiency remained near 100% for more than 6 h when a swirl generator was employed in the entrance of the reactor.
Facile Synthesis of Highly Biocompatible Poly(2-(methacryloyloxy)ethyl phosphorylcholine)-Coated Gold Nanoparticles in Aqueous Solution (2006)

Diblock copolymers comprising a highly biocompatible poly(2-(methacryloyloxy)ethyl phosphorylcholine) (PMPC) block and a poly(2-(dimethylamino)ethyl methacrylate) (PDMA) block were evaluated for the synthesis of sterically stabilized gold nanoparticles in aqueous solution. The PDMA block becomes partially protonated on addition of HAuCl4, and the remaining nonprotonated tertiary amine groups reduce the AuCl4- counterion to zerovalent gold in situ. This approach results in the adsorption of the PDMA block onto the gold nanoparticle surface while the PMPC chains serve as a stabilizing block, producing highly biocompatible gold sols in aqueous solution at ambient temperature without any external reducing agent. The size and shape of gold nanoparticles could be readily controlled by tuning synthesis parameters such as the block composition and the relative and absolute concentrations of the PMPC-PDMA diblock copolymer and HAuCl4. These highly biocompatible gold sols have potential biomedical applications.
Solution Structures of Chemoenzymatically Synthesized Heparin and Its Precursors (2008)

We report the first chemoenzymatic synthesis of the stable isotope-enriched heparin from a uniformly labeled [(13)C,(15)N]N-acetylheparosan (-GlcA(1,4)GlcNAc-) prepared from E. coli K5. Glycosaminoglycan (GAG) precursors and heparin were formed from N-acetylheparosan by the following steps: chemical N-deacetylation and N-sulfonation leading to N-sulfoheparosan (-GlcA(1,4)GlcNS-); enzyme-catalyzed C5-epimerization and 2-O-sulfonation leading to undersulfated heparin (-IdoA2S(1,4)GlcNS-); enzymatic 6-O-sulfonation leading to the heparin backbone (-IdoA2S(1,4)GlcNS6S-); and selective enzymatic 3-O-sulfonation leading to the anticoagulant heparin, containing the GlcNS6S3S residue. Heteronuclear, multidimensional nuclear magnetic resonance spectroscopy was employed to analyze the chemical composition and solution structure of [(13)C,(15)N]N-acetylheparosan, precursors, and heparin. Isotopic enrichment was found to provide well-resolved (13)C spectra with the high sensitivity required for conformational studies of these biomolecules. Stable isotope-labeled heparin was indistinguishable from heparin derived from animal tissues and is a novel reagent for studying the interaction of heparin with proteins.
Infestations (1999)

Despite all the available pediculicides and scabicides that have been developed in this century we still find ourselves facing a treatment dilemma. Although body lice are not abundant in the United States, they are still found in the homeless populations of our major cities. With the development of dichlorodiphenyltrichloroethane (DDT) in the early 1940s there was no longer a reason to pursue the basic biology of lice. Cheap and effective treatments such as DDT reduced the lice supply and with them the louse-borne diseases that went with the body louse. These diseases, such as trench fever caused by Bartonella quintana, are re-emerging in the United States and in other countries. Head lice and crab lice have never been studied as possible vectors of disease, because they were not usually found in the same population and because, unlike body lice, no laboratory model for head or crab lice exists. Body lice have given all lice a bad reputation, and the stigma from infestations with lice make education in this area difficult. Much of the older lice studies in the literature were conducted in the cold climate of England, which is quite different from climactic conditions in the United States. Body lice, not head or crab lice, were used because they were hardier and can go longer without a blood meal. Pediculosis capitis infestations are in epidemic proportions in some parts of the United States and the world. The development of lice resistant to DDT, lindane, malathion, and permethrin and with a reduced efficacy with natural pyrethrins has resulted in the highest prevalence of head lice in the last 50 years. Parents are spending hundreds of dollars on head lice products that do not meet their purported claims. Some children in Florida have missed more than 2 months of school because of head lice or nits. Parents and even dermatologists are prescribing anything from petroleum gel to olive oil and mayonnaise in an effort to get children back in school. Oral ivermectin is a promising candidate for resistant lice, but future studies will be needed to determine the optimum dosing regimens. Oral ivermectin has been effective even against crusted cases of scabies in patients with acquired immunodeficiency syndrome. In this monograph the diagnosis and treatments for body, head, and crab lice and scabies are discussed, including issues of resistance and treatment in immunocompromised individuals.
Identification of Oncofetal Antigen/Immature Laminin Receptor Protein Epitopes That Activate BALB/c Mouse OFA/iLRP-Specific Effector and Regulatory T Cell Clones (2006)

During tumor development in mice and humans, oncofetal Ag/immature laminin receptor (OFA/iLRP)-specific Th1, CTL, and IL-10-secreting T (Ts) cells are induced. The presence of too many Ts or too few effector T cells appears to predict a poor prognosis. We established clones of OFA/iLRP-specific splenic Th1, CTL, and Ts cells from the OFA/iLRP+ MCA1315 fibrosarcoma-bearing BALB/c mice or from BALB/c mice vaccinated with 1 or 10 microg of rOFA/iLRP. The MCA1315 tumor cell-reactive T cell clones were characterized as to surface Ag phenotype, cytokine secretion profile, and specificity for OFA/iLRP presented by syngeneic splenic APC. OFA/iLRP-specific Th1 and Ts clones were established from all mice. OFA/iLRP-specific CTL could be established from all mice except for mice immunized with 10 microg of rOFA/iLRP. Analysis of the proliferation profile of the OFA/iLRP-specific clones to overlapping OFA/iLRP 12-mer peptides that spanned the OFA/iLRP protein sequence defined the epitopes to which the T cell clones responded. There was a similar spatial distribution of the epitopes to which the two types of CD8 T cell clones responded. The nonapeptide epitopes of the Ts clones were located between aa 36 and 147 of OFA/iLRP, while the epitopes of the CTL clones were located between aa 52 and 163. Even though the CTL and Ts epitopes shared part of the protein, all of the CD8 CTL epitopes were distinct and separable from those of CD8 Ts cells.
Two-dimensional beam steering using an electrically tunable impedance surface (2003)

By covering a metal ground plane with a periodic surface texture, we can alter its electromagnetic properties. The impedance of this metasurface can be modeled as a parallel resonant circuit, with sheet inductance L, and sheet capacitance C. The reflection phase varies with frequency from +/spl pi/ to -/spl pi/, and crosses through 0 at the LC resonance frequency, where the surface behaves as an artificial magnetic conductor. By incorporating varactor diodes into the texture, we have built a tunable impedance surface, in which an applied bias voltage controls the resonance frequency, and the reflection phase. We can program the surface to create a tunable phase gradient, which can electronically steer a reflected beam over +/- 40/spl deg/ in two dimensions, for both polarizations. We have also found that this type of resonant surface texture can provide greater bandwidth than conventional reflectarray structures. This new electronically steerable reflector offers a low-cost alternative to a conventional phased array.