gebhart/patrepeval huggingface dataset:
Pilot tone selection for channel estimation in a mobile OFDM system (1998)

Channel estimation for mobile OFDM systems requires transmission of pilot tones. This paper addresses the important issue of selecting these pilot tones, so as to achieve a good quality estimate. It is shown that the best set of tones to be used are those which are equally spaced. Furthermore, it is shown using the case of a first order Markov channel, that it is more efficient to use a few pilot tones in all symbols, rather than use all tones as pilot tones in some symbols.
Highly Stereoselective Photocyclodimerization of α-Cyclodextrin-Appended Anthracene Mediated by γ-Cyclodextrin and Cucurbit[8]uril: A Dramatic Steric Effect Operating Outside the Binding Site (2008)

Photocyclodimerization of alpha-cyclodextrin (CD)-appended anthracene was studied in the presence of gamma-CD and cucurbit[8]uril (CB[8]) hosts to manipulate the stereodifferentiating photoreaction occurring inside the cavity by the bulky attachment located outside. The gamma-CD-mediated photodimerization afforded the head-to-tail photodimers in 98% combined yield, in particular, the syn-head-to-tail photodimer of 91% ee in 68% yield, which are much greater than 32% ee and 44% yield obtained with unmodified anthracene carboxylate. The use of CB[8] also led to a striking inversion of the head-to-tail/head-to-head selectivity, affording exclusively the head-to-head photodimers in 99% combined yield.
The Tumor Targeted Superantigen ABR-217620 Selectively Engages TRBV7-9 and Exploits TCR-pMHC Affinity Mimicry in Mediating T Cell Cytotoxicity (2013)

The T lymphocytes are the most important effector cells in immunotherapy of cancer. The conceptual objective for developing the tumor targeted superantigen (TTS) ABR-217620 (naptumomab estafenatox, 5T4Fab-SEA/E-120), now in phase 3 studies for advanced renal cell cancer, was to selectively coat tumor cells with cytotoxic T lymphocytes (CTL) target structures functionally similar to natural CTL pMHC target molecules. Here we present data showing that the molecular basis for the anti-tumor activity by ABR-217620 resides in the distinct interaction between the T cell receptor β variable (TRBV) 7-9 and the engineered superantigen (Sag) SEA/E-120 in the fusion protein bound to the 5T4 antigen on tumor cells. Multimeric but not monomeric ABR-217620 selectively stains TRBV7-9 expressing T lymphocytes from human peripheral blood similar to antigen specific staining of T cells with pMHC tetramers. SEA/E-120 selectively activates TRBV7-9 expressing T lymphocytes resulting in expansion of the subset. ABR-217620 selectively triggers TRBV7-9 expressing cytotoxic T lymphocytes to kill 5T4 positive tumor cells. Furthermore, ABR-217620 activates TRBV7-9 expressing T cell line cells in the presence of cell- and bead-bound 5T4 tumor antigen. Surface plasmon resonance analysis revealed that ABR-217620 binds to 5T4 with high affinity, to TRBV7-9 with low affinity and to MHC class II with very low affinity. The T lymphocyte engagement by ABR-217620 is constituted by displaying high affinity binding to the tumor cells (KD approximately 1 nM) and with the mimicry of natural productive immune TCR-pMHC contact using affinities of around 1 µM. This difference in kinetics between the two components of the ABR-217620 fusion protein will bias the binding towards the 5T4 target antigen, efficiently activating T-cells via SEA/E-120 only when presented by the tumor cells.
Brefeldin A redistributes resident and itinerant Golgi proteins to the endoplasmic reticulum. (1989)

Brefeldin A (BFA) has been reported to block protein transport from the ER and cause disassembly of the Golgi complex. We have examined the effects of BFA on the transport and processing of the vesicular stomatitis virus G protein, a model integral membrane protein. Delivery of G protein to the cell surface was reversibly blocked by 6 micrograms/ml BFA. Pulse-label experiments revealed that in the presence of BFA, G protein became completely resistant to endoglycosidase H digestion. Addition of sialic acid, a trans-Golgi event, was not observed. Despite processing by cis- and medial Golgi enzymes, G protein was localized by indirect immunofluorescence to a reticular distribution characteristic of the ER. By preventing transport of G protein from the ER with the metabolic inhibitor carbonyl cyanide m-chlorophenylhydrazone or by use of the temperature-sensitive mutant ts045, which is restricted to the ER at 40 degrees C, we showed that processing of G protein occurred in the ER and was not due to retention of newly synthesized Golgi enzymes. Rather, redistribution of preexisting cis and medial Golgi enzymes to the ER occurred as soon as 2.5 min after addition of BFA, and was complete by 10-15 min. Delivery of Golgi enzymes to the ER was energy dependent and occurred only at temperatures greater than or equal to 20 degrees C. BFA also induced retrograde transport of G protein from the medial Golgi to the ER. Golgi enzymes were completely recovered from the ER 10 min after removal of BFA. These findings demonstrate that BFA induces retrograde transport of both resident and itinerant Golgi proteins to the ER in a fully reversible manner.
Ligand-Controlled Electron Structure of Catalytically Active Ni Complexes (2018)

We have performed a systematic study of the electron structure of a series of Ni(I) and Ni(II) iodo and methyl complexes with a variety of di- and tridentate nitrogen ligands to study the influence of these ligands in the structure of catalytically active complexes in cross-coupling reactions. Ni(II) compounds show the expected square-planar configuration typical of complexes of d<sup>8</sup> metals, regardless of the kind of coordinating nitrogen atom (sp<sup>2</sup> or sp<sup>3</sup>) found in ligands derived from either trialkylamines or pyridines. In contrast, Ni(I) complexes show different structures. Thus, the absence of orbitals capable of delocalizing the unpaired electron (such as in TMEDA and PMDTA derivatives) leads to nonplanar iodo or methyl tetracoordinate complexes. In contrast, the presence of ligands derived from pyridine allows delocalization of the unpaired electron on the ligand. This delocalization is especially effective for terpyridine species.
Screen Patterns Used in Reproduction of Continuous-Tone Graphics (1974)

There are many ways of displaying a video signal derived from graphical material. People in the graphic arts business have been wrestling with the same sorts of problems for more than 100 years; this article surveys what they have done, in the hope that some useful technology transfer may occur.
Further characterization of the complementation group B temperature-sensitive mutant of respiratory syncytial virus (1977)

ts-2, a temperature-sensitive and plaque morphology mutant of respiratory syncytial virus and sole representative of complementation group B, was compared with members of the other complementation groups of respiratory syncytial virus (group A [ts-1] and group C [ts-7]). ts-2 was found to be 10- to 1,000-fold more restricted in growth and ability to spread at restrictive temperatures (37, 38, and 39 degrees C) than at the permissive temperature (32 degrees C). In temperature shift-up experiments, the ts defect of ts-1 and other members of complementation group A was found to effect a late function that was required for at least 13 h in the replicative cycle. The ts lesion of ts-7 affected a function early in the replication cycle. In contrast, ts-2 was not temperature sensitive when studied by the shift-up technique. The discrepancy between the ts plaque property and failure to detect temperature sensitivity during the shift-up experiment was resolved when it was shown that ts-2 had a defect in adsorption or penetration or both at the restrictive temperature. Clonal analysis of revertant ts-2 showed a coordinate restoration of ts+ phenotype ans syncytium-forming capacity. It appears that ts-2 has a defect in a protein that is involved in adsorption and/or penetration of virus and is also responsible for cell fusion activity.
Mini‐plasmin found in the epithelial cells of bronchioles triggers infection by broad‐spectrum influenza A viruses and Sendai virus (2001)

Extracellular cleavage of virus envelope fusion glycoproteins by host cellular proteases is a prerequisite for the infectivity of mammalian and nonpathogenic avian influenza viruses, and Sendai virus. Here we report a protease present in the airway that, like tryptase Clara, can process influenza A virus haemagglutinin and Sendai virus envelope fusion glycoprotein. This protease was extracted from the membrane fraction of rat lungs, purified and then identified as a mini-plasmin. Mini-plasmin was distributed predominantly in the epithelial cells of the upward divisions of bronchioles and potentiated the replication of broad-spectrum influenza A viruses and Sendai virus, even that of the plasmin-insensitive influenza A virus strain. In comparison with plasmin, its increased hydrophobicity, leading to its higher local concentrations on membranes, and decreased molecular mass may enable mini-plasmin to gain ready access to the cleavage sites of various haemagglutinins and fusion glycoproteins after expression of these viral proteins on the cell surface. These findings suggest that mini-plasmin in the airway may play a pivotal role in the spread of viruses and their pathogenicity.
Conduction velocity is related to morphological cell type in rat dorsal root ganglion neurones. (1985)

Combining intracellular recording and dye-injection techniques permitted direct correlation of neuronal soma size with peripheral nerve conduction velocity in individual neurones of the L4 dorsal root ganglion (d.r.g.) of the anaesthetized 5-8-week-old rat. The conduction velocities fell into two main groups; those greater than 14 m/s (A alpha and beta fibres) and those less than 8 m/s (A delta and C fibres). Fibres with conduction velocities in the A delta range (2.2-8 m/s) in the sciatic nerve between the sciatic notch and the neuronal soma in the d.r.g. often conducted more slowly, that is in the C-fibre range (less than 1.4 m/s), in the periphery from the tibial nerve to the sciatic notch. For the fast-conducting myelinated afferents, there was a loose positive correlation between cell size and the conduction velocity of the peripheral axon, whereas a clearer positive correlation existed between neuronal cell size and axonal conduction velocity both for A delta- and for C-fibre afferents. The relationship of the cell cross-sectional area (measured at the nucleolar level), to the cell volume for each neuronal soma was similar for the different conduction velocity groups. The somata of the fast-conducting myelinated A alpha and A beta fibres had a similar mean and range of cross-sectional areas to those of the large light cell population. The somata with A delta and C fibres were of a more uniform size and were restricted to the smaller cells within the ganglia. The mean and range of cross-sectional areas of the C cells was similar to those of the small dark cell population. A delta somata had a larger mean and range of cell sizes than those of the small dark cell population. The relationships of peripheral axon type to the morphological cell types are discussed.
Protein kinase C isoforms in normal and transformed cells of the melanocytic lineage (2002)

Enzymes belonging to the protein kinase C (PKC) family represent one of the major mediators of signal transduction in melanocytes. To identify PKC isoforms that may be associated with the process of malignant transformation and metastasis, we investigated the expression pattern of 11 different PKC isoforms (alpha, beta I, beta II, gamma, delta, epsilon, eta, theta, zeta, lambda, and iota) in melanoma lymph node metastases, in cell lines established from these metastases, in primary cell cultures from normal melanocytes, and in permanent cell lines established from spontaneously transformed melanocytes. PKC alpha, beta I, beta II, delta, epsilon, eta, zeta, lambda and iota were found to be expressed in total lysates from melanoma metastases. In permanent cell lines established from these metastases, the expression levels of PKC beta I, beta II, delta, epsilon, and eta were lower or undetectable when compared with initial expression in tumour lysates. In normal primary melanocyte cultures, the PKC isoforms beta II, delta, epsilon, eta and iota were undetectable. PKC gamma and theta isoforms were undetectable in all melanocytic cell types examined. PKC iota was the only isoform exclusively detected in tumour lysates, in spontaneously transformed melanoma cells and melanoma cell lines, but not in normal melanocytes, and may therefore be associated with the transformed phenotype in human melanoma in vitro and in vivo.
Communication Ad Hoc Protocol for Intelligent Video Sensing Using AR Drones (2013)

In order to use intelligent video sensing systems, three main features should be satisfied. HD video transmission to provide enough video quality for image treatment, a wireless ad hoc network to intelligent locate and focus the issue to be sensed and enough available bandwidth to provide HD video quality. This paper presents a communication protocol designed and deployed to provide HD video transfers between several mobile devices working with Android and Linux OS. Experimental results using AR Drones with Wi-Fi forming an ad hoc network demonstrate the big potential of this kind of networks in mobile devices. The use of AR Drones will revolution the field of HD video communications over air for intelligent video sensing because they have many sensors to be controlled autonomously using GPS or manually using remote control.
Capacitor Voltage Balancing of Flying Capacitor Multilevel Converters by Space Vector PWM (2012)

Proper operation of a multilevel flying capacitor converter (FCC) necessitates a closed-loop voltage balancing strategy. This paper proposes a space vector modulation (SVM)-based approach that benefits from the switching state redundancy of an <i xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">n</i> -level FCC to implicitly carry out the voltage balancing task within the switching strategy. Based on the voltage deviations of the capacitor voltages, a cost function is defined and minimized to choose the proper redundant switching states among the available switching states. The performance of a grid-connected four-level FCC under the proposed SVM strategy for various operating conditions is studied and evaluated based on time-domain simulations in the PSCAD/EMTDC environment, and experimentally verified. The studies demonstrate the capability of the proposed SVM strategy to regulate the capacitor voltages at their nominal reference values.
Mammalian Target of Rapamycin (mTOR) Activation Increases Axonal Growth Capacity of Injured Peripheral Nerves (2010)

Unlike neurons in the central nervous system (CNS), injured neurons in the peripheral nervous system (PNS) can regenerate their axons and reinnervate their targets. However, functional recovery in the PNS often remains suboptimal, especially in cases of severe damage. The lack of regenerative ability of CNS neurons has been linked to down-regulation of the mTOR (mammalian target of rapamycin) pathway. We report here that PNS dorsal root ganglial neurons (DRGs) activate mTOR following damage and that this activity enhances axonal growth capacity. Furthermore, genetic up-regulation of mTOR activity by deletion of tuberous sclerosis complex 2 (TSC2) in DRGs is sufficient to enhance axonal growth capacity in vitro and in vivo. We further show that mTOR activity is linked to the expression of GAP-43, a crucial component of axonal outgrowth. However, although TSC2 deletion in DRGs facilitates axonal regrowth, it leads to defects in target innervation. Thus, whereas manipulation of mTOR activity could provide new strategies to stimulate nerve regeneration in the PNS, fine control of mTOR activity is required for proper target innervation.
A Spirulina-Enhanced Diet Provides Neuroprotection in an α-Synuclein Model of Parkinson's Disease (2012)

Inflammation in the brain plays a major role in neurodegenerative diseases. In particular, microglial cell activation is believed to be associated with the pathogenesis of neurodegenerative diseases, including Parkinson's disease (PD). An increase in microglia activation has been shown in the substantia nigra pars compacta (SNpc) of PD models when there has been a decrease in tyrosine hydroxylase (TH) positive cells. This may be a sign of neurotoxicity due to prolonged activation of microglia in both early and late stages of disease progression. Natural products, such as spirulina, derived from blue green algae, are believed to help reverse this effect due to its anti-inflammatory/anti-oxidant properties. An adeno-associated virus vector (AAV9) for α-synuclein was injected in the substantia nigra of rats to model Parkinson's disease and to study the effects of spirulina on the inflammatory response. One month prior to surgeries, rats were fed either a diet enhanced with spirulina or a control diet. Immunohistochemistry was analyzed with unbiased stereological methods to quantify lesion size and microglial activation. As hypothesized, spirulina was neuroprotective in this α-synuclein model of PD as more TH+ and NeuN+ cells were observed; spirulina concomitantly decreased the numbers of activated microglial cells as determined by MHCII expression. This decrease in microglia activation may have been due, in part, to the effect of spirulina to increase expression of the fractalkine receptor (CX3CR1) on microglia. With this study we hypothesize that α-synuclein neurotoxicity is mediated, at least in part, via an interaction with microglia. We observed a decrease in activated microglia in the rats that received a spirulina- enhanced diet concomitant to neuroprotection. The increase in CX3CR1 in the groups that received spirulina, suggests a potential mechanism of action.
Meso-β Doubly Linked Zn(II) Porphyrin Trimers: Distinct anti-versus-syn Effects on Their Photophysical Properties (2009)

Meso-beta doubly linked Zn(II) porphyrin dimer 1 and anti- and syn-trimers 2 and 3 were synthesized by DDQ-Sc(OTf)(3) oxidation of the corresponding meso-beta singly linked porphyrin precursors. The absorption and fluorescence spectra and TPA cross-section values of 2 and 3 are distinctly different, reflecting their molecular shapes.
Molecular characterization of cell surface antigens of fetal tissue. Detailed analysis of glycosphingolipids of meconium of a human O Le(a–b+) secretor. (1981)

The glycosphingolipids of meconium of a human O Le(a--b+) secretor have been subjected to structural and immunological characterization. Mass spectrometry, proton NMR spectroscopy, and gas-liquid chromatography were used for chemical analyses, and haemagglutination-inhibition for immunological characterization. The great amounts of glycolipids present also facilitated the analyses of minor species constituting only 1% or less of the total weight of the non-acid glycolipids. Glucosylceramide and galactosylceramide were the dominating glycolipids comprising 15 and 30%, respectively, of the total weight. The diglycosylceramides found were lactosylceramide and digalactosylceramide. The globo series was represented by globotriaosylceramide, small amounts of globotetraosylceramide, part of which had ceramide of phytosphingosine and hydroxy fatty acid, and a minor species of monofucosyl hexaglycosylceramide with an inner globotetraose oligosaccharide. No Forssman or Forssman-like antigen was found. The lacto series, quantitatively approximately 30% of the total weight, was mainly represented by lactotetraosylceramide and H-active, Lea-active, and Leb-active glycolipids with 5-6 sugars based on lactotetraosylceramide. Minor species having 0-3 fucoses in their carbohydrate chains and carrying up to 11 sugar residues were also identified. Great amounts of free ceramides were also found to be typical for this tissue.
Calcium Signaling in Neuronal Development (2011)

The development of the nervous system involves the generation of a stunningly diverse array of neuronal subtypes that enable complex information processing and behavioral outputs. Deciphering how the nervous system acquires and interprets information and orchestrates behaviors will be greatly enhanced by the identification of distinct neuronal circuits and by an understanding of how these circuits are formed, changed, and/or maintained over time. Addressing these challenging questions depends in part on the ability to accurately identify and characterize the unique neuronal subtypes that comprise individual circuits. Distinguishing characteristics of neuronal subgroups include but are not limited to neurotransmitter phenotype, dendritic morphology, the identity of synaptic partners, and the expression of constellations of subgroup-specific proteins, including ion channel subtypes.
Sorting and Hardware Assisted Rendering for Volume Visualization. (1995)

We present some techniques for volume rendering unstructured data. Colors and opacities are interpolated between vertices using hardware assisted texture mapping. We also present an O(n 2 ) method for sorting n arbitrarily shaped convex polyhedra prior to visualization. It generalizes the Newell, Newell and Sancha sort for polygons to 3-D volume elements. Introduction Tuchman, without artifacts due to linear approximation of the non-linear opacity effects. This project grew out of the need to visualize unstructured meshed vector fields such as those found in existing finite element modeling code. Some volume rendering applications do not require more than one color. However, we have developed a visualization tool for rendering multi-colored elements, such as colored flow volumes in a vector field, using an implementation of the Shirley-Tuchman [1] algorithm. While monochromatic elements can be composited in any order as shown by [2], data sets containing many colors must be com...
Viruses as therapeutic agents. I. Treatment of nonobese insulin-dependent diabetes mice with virus prevents insulin-dependent diabetes mellitus while maintaining general immune competence. (1990)

A situation in which virus can be used as a therapeutic agent to prevent a lethal autoimmune disease is explored. Nonobese insulin-dependent diabetes (NOD) mice spontaneously develop insulin-dependent diabetes mellitus (IDDM), characterized by lymphocytic infiltration into the islets of Langerhans and beta cell destruction, resulting in hypoinsulinemia, hyperglycemia, ketoacidosis, and death. Infection of NOD mice with lymphocytic choriomeningitis virus (LCMV) aborts the autoimmune manifestations and resultant IDDM. The viruses' effect is on a subset of CD4+ lymphocytes. Ablating this autoimmune diabetes does not significantly alter immune responses to a variety of non-LCMV antigens that require CD4+ lymphocyte participation. The prevention of IDDM associated with viral therapy is maintained throughout the life spans of NOD mice.