gebhart/patrepeval huggingface dataset:
SIFT: a tool for wide-area information dissemination (1995)

The dissemination model is becoming increasingly important in wide-area information system. In this model, the user subscribes to an information dissemination service by submitting profiles that describe his interests. He then passively receives new, filtered information. The Stanford Information Filtering Tool (SIFT) is a tool to help provide such service. It supports full-text filtering using well-known information retrieval models. The SIFT filtering engine implements novel indexing techniques, capable of processing large volumes of information against a large number of profiles. It runs on several major Unix platforms and is freely available to the public. In this paper we present SIFT&amp;apos;s approach to user interest modeling and user-server communication. We demonstrate the processing capability of SIFT by describing a running server that disseminates USENET News. We present an empirical study of SIFT&amp;apos;s performance, examining its main memory requirement and ability to scale with infor...
P Blood Groups (2002)

This chapter contains sections titled: Introduction Notation Biochemistry P1 antigen and anti-P1 P antigen and anti-P Pk phenotype, Pk antigen, and anti-Pk LKE and anti-LKE p Phenotype and anti-PP1Pk Some unusual phenotypes Other P antibodies P antigens as receptors for pathogenic microorganisms The association of P antibodies with early abortion
Sustained Release Properties of Polyelectrolyte Multilayer Capsules (2001)

Layer-by-layer (LbL) assembly of oppositely charged polyelectrolytes was used to coat fluorescein particles. These particles, with a size of 4−9 μm, were prepared by precipitation of fluorescein at pH 2. Polystyrensulfonate (PSS) and polyallylamine (PAH) were used to form a polyelectrolyte shell on the fluorescein core. The permeation of fluorescein molecules through the polyelectrolyte shell during core dissolution was monitored at pH 8 by the increasing fluorescence intensity as a result of dequenching. The number of polyelectrolyte layers sufficient to sustain fluorescein release was found to be 8−10. Increasing the number of layers prolonged the core dissolution time for minutes. The permeability of polyelectrolyte multilayers of the thickness of 20 nm for fluorescein is about 10-9 m/s. The features of the release profile and possible applications of the LbL method for shell formation in order to control release properties for entrapped materials are outlined.
Variability of erythrocyte size and hemoglobin content observed in man and four selected mammals. (1986)

A new measurement technique employing light scattering at different angles has been developed for analysis of blood cells. This method which is part of the Technicon H*1 system, a hematology analyzer designed for routine processing of human blood samples, allows the independent measurement of cell volume and hemoglobin content of isovolumetrically sphered red blood cells. Analysis with this instrument of the blood of humans, dogs, rabbits, rats and mice demonstrates that in addition to the expected differences in hematologic parameters, the intrasample distribution of cell hemoglobin is species dependent. In general, cell hemoglobin content is more tightly controlled for the other mammals when compared to humans. In particular, the dogs tested showed the least variability in cell hemoglobin content both within species and within sample.
Human heme oxygenase cDNA and induction of its mRNA by hemin (1988)

Hemin treatment increased both activity and mRNA level of heme oxygenase in human macrophages. Using poly(A)-rich RNA prepared from human macrophages treated with hemin, we have constructed a cDNA library in the Okayama-Berg vector. The human heme oxygenase cDNA was isolated by screening this library with a rat cDNA and was subjected to nucleotide sequence analysis. The deduced human heme oxygenase is composed of 288 amino acids with a molecular mass of 32,800 Da. The homology in amino acid sequences between rat and human heme oxygenase is 80%. Like rat heme oxygenase, human enzyme has a putative membrane segment at its carboxyl terminus, which is probably essential for the insertion of heme oxygenase into endoplasmic reticulum. Both rat and human heme oxygenase have no cysteine residues. Recently we have shown that rat heme oxygenase is a heat-shock protein [J. Biol. Chem. 262, 12889-12892 (1987)], and therefore we examined the effects of heat treatment on the induction of heme oxygenase in human macrophages and glioma cells. In contrast to hemin treatment, heat treatment had no apparent effects in either human cell line on the activity of heme oxygenase and its mRNA levels. These results suggest that human heme oxygenase may not be a heat-shock protein.
MCP-1, not MIP-1α, Is the Endogenous Chemokine That Cooperates With TGF-β to Inhibit the Cycling of Primitive Normal but not Leukemic (CML) Progenitors in Long-Term Human Marrow Cultures (1998)

The long-term culture (LTC) system has been useful for analyzing mechanisms by which stromal cells regulate the proliferative activity of primitive normal, but not chronic myeloid leukemia (CML), hematopoietic progenitor cells. In previous studies, we identified two endogenous inhibitors in this system. One is transforming growth factor-beta (TGF-beta), which is equally active on primitive normal and CML progenitors. The other we now show to be monocyte chemoattractant protein-1 (MCP-1). Thus, MCP-1, when added to LTC, blocked the activation of primitive normal progenitors but did not arrest the cycling of primitive CML progenitors. Moreover, the endogenous inhibitory activity of LTC stromal layers could be overcome by the addition of neutralizing antibodies to MCP-1, but not to macrophage inflammatory protein-1alpha (MIP-1alpha). However, neither of these antibodies antagonized the inhibitory activity of NAc-Ser-Asp-Lys-Pro (AcSDKP) on primitive normal but not CML progenitor cycling in this system. Moreover, none of six other -C-C- or -C-X-C- chemokines, previously shown to inhibit primitive normal human CFC proliferation in semisolid assays, were found to act as negative regulators when added to normal LTC. These results provide further support for the concept that primitive CML progenitor cell proliferation is deregulated when these cells are exposed to limiting concentrations of multiple inhibitors, only some of which have differential actions on normal and Ph+/BCR-ABL+ cells.
Long-term Treatment of 189 Acromegalic Patients With the Somatostatin Analog Octreotide (1991)

Octreotide is an effective treatment for acromegaly that may be used as primary therapy or after surgery and/or pituitary irradiation.
Hybrid I-f Starting and Observer-Based Sensorless Control of Single-Phase BLDC-PM Motor Drives (2011)

A motion sensorless control for single-phase permanent magnet brushless dc motor based on an I-f starting sequence and a real-time permanent magnet flux estimation is proposed here. The special calculation for extracting the position and speed used here implies the generating of an orthogonal flux system, the atan2 trigonometric function, and a phase-locked loop observer. The influence of the permanent magnet flux harmonic content is presented by analytical expressions and digital simulations. The proposed sensorless control is validated by complete experimental results on a commercial small high-speed blower-motor (40 W, 10 krpm, 12 Vdc).
Inhibition of Irritation and Contact Hypersensitivity by Ethacrynic Acid (1998)

The immunosuppressive effect of topical ethacrynic acid (ECA) was tested on both the induction and elicitation phases of contact sensitization in a mouse model. ECA (0.5% in vehicle) reduced the sensitization response by >50% when the sensitizer was either dinitrochlorobenzene (DNCB), oxazalone (OX) or para-phenylenediamine (PPD), and was applied 1 day later to the ECA-pretreated skin site. The immunosuppressive effect of combining ECA with either hydrocortisone or with cis-urocanic acid was also tested. An additive suppressive effect was observed with ECA in both combinations. The effect of ECA (1% in vehicle) on blocking the elicitation phase was also examined in a mouse ear edema assay. ECA was highly effective in preventing the challenge response in mice previously sensitized to either DNCB, OX or PPD. ECA (1% in vehicle) was also tested for its ability to inhibit contact irritation. ECA (1% in vehicle) was highly effective in preventing ear edema due to topically applied skin irritants including arachidonic acid, capsaicin, lactic acid, phorbol myristate acetate, trans-retinoic acid, and sodium lauryl sulfate. ECA may be useful for both prophylaxis and therapeutic treatment of diverse skin conditions including contact dermatitis, eczema, and other related allergic skin disorders.
A Comprehensive Automated 3D Approach for Building Extraction, Reconstruction, and Regularization from Airborne Laser Scanning Point Clouds (2008)

Three dimensional city models are necessary for supporting numerous management applications. For the determination of city models for visualization purposes, several standardized workflows do exist. They are either based on photogrammetry or on LiDAR or on a combination of both data acquisition techniques. However, the automated determination of reliable and highly accurate city models is still a challenging task, requiring a workflow comprising several processing steps. The most relevant are building detection, building outline generation, building modeling, and finally, building quality analysis. Commercial software tools for building modeling require, generally, a high degree of human interaction and most automated approaches described in literature stress the steps of such a workflow individually. In this article, we propose a comprehensive approach for automated determination of 3D city models from airborne acquired point cloud data. It is based on the assumption that individual buildings can be modeled properly by a composition of a set of planar faces. Hence, it is based on a reliable 3D segmentation algorithm, detecting planar faces in a point cloud. This segmentation is of crucial importance for the outline detection and for the modeling approach. We describe the theoretical background, the segmentation algorithm, the outline detection, and the modeling approach, and we present and discuss several actual projects.
Antenna pointing for high bandwidth communications from mobile robots (1998)

This paper discusses the challenge of achieving high bandwidth, distant range wireless communication from mobile robots by way of antenna tracking. In the case of robots traversing rough terrain at moderate speeds, tracking demands high slew rates and large motion ranges due to vehicle motion disturbances. Attaining tracking accuracy, particular with the low mass and power inherent to mobile robots, requires an innovative approach. This paper presents the requirements analysis, mechanism design, sensor configuration and some experimental results for an antenna pointing mechanism that was developed for Nomad, a planetary-relevant mobile robot. The mechanism was demonstrated during the summer of 1997 in Nomad's 200 km traverse in the Atacama Desert of Chile.
Enhancement of anti-influenza A virus cytotoxicity following influenza A virus vaccination in older, chronically ill adults (1990)

We studied anti-influenza cytotoxicity by bulk peripheral blood mononuclear leukocyte (PBL) cultures derived from older, chronically ill volunteers undergoing vaccination. Vaccinees received either cold-recombinant, live-attenuated influenza A/Korea/1/82 (H3N2) virus intranasally or inactivated monovalent influenza A/Taiwan/1/86 (H1N1) subvirion vaccine intramuscularly. PBL were collected pre- and postvaccination and in vitro stimulated by autologous PBL infected with influenza A virus homologous and heterosubtypic to the respective vaccine strain. Cytotoxicity was measured against influenza A virus-infected autologous and human leukocyte antigen (HLA)-mismatched PBL targets infected with influenza A virus homologous or heterosubtypic to the vaccine virus strain. Vaccinees infected with the live-attenuated virus developed significant rises in mean anti-influenza, HLA-restricted cytotoxicity that was cross-reactive against influenza A viruses homologous and heterosubtypic to the vaccine virus. The enhanced cross-reactive cytotoxicity was inducible postvaccination by in vitro stimulation with autologous PBL infected with the homologous influenza A (H3N2) virus and with influenza A (H1N1) virus. In contrast, after vaccination with inactivated monovalent subvirion vaccine, volunteers developed significant increases in mean anti-influenza, HLA-restricted cytotoxicity only against autologous PBL infected with homologous influenza A (H1N1) virus. Increased cytotoxicity occurred only after in vitro stimulation with autologous cells infected with homologous influenza A (H1N1) virus. Mean gamma interferon levels in supernatant fluids of influenza A virus-stimulated effector PBL did not increase postvaccination, despite increased levels of anti-influenza cytotoxicity displayed by the effector cells. We conclude that the live-attenuated influenza A virus infection induced a broader range of enhanced anti-influenza cytotoxicity than did the inactivated subvirion vaccine.
Identification of FTIR Characteristic Bands of Softwood Kraft Lignin in Alkali Solutions by FT-IR Spectroscopy (2003)

Lignin was precipitated by acidification of black liquor (KBL) obtained from low-solid kraft pulping of pinus radiata. The precipitated lignin was thoroughly washed and then re-dissolved in alkali solutions for infra-red studies. Mid-infrared spectra were obtained for the solutions, using a Fourier Transform Infrared (FT-IR) spectrometer equipped with a Zinc-Selenide crystal Horizontal Attenuated Total Reflectance (HATR) cell. It was found that the absorption of lignin was clearly observed in the 1600-1000 cm-1 region and the absorption intensity of these bands sensitively changes with the lignin concentration. Bands that are associated with the aromatic rings (1495 and 1420 cm-1), asymmetric bending of methyl groups (1470 cm-1) ring breathing with C-O stretching (1287, 1265, 1238 and 1132 cm-1) and aromatic C-H in-plane deformation (1032 cm-1) are clearly shown on the obtained spectra.
Correction of sulfatide metabolism after transfer of prosaposin cDNA to cultured cells from a patient with SAP-1 deficiency. (1992)

The lysosomal removal of the sulfate moiety from sulfatide requires the action of two proteins, arylsulfatase A and sphingolipid activator protein-1 (SAP-1). Recently, patients have been identified who have a variant form of metachromatic leukodystrophy which is characterized by mutations in the gene coding for SAP-1, which is also called "prosaposin." All of the mutations characterized in these patients result in (a) deficient mature SAP-1, as determined by immunoblotting after SDS-PAGE of tissue and cell extracts, and (b) decreased ability of cultured skin fibroblasts to metabolize endocytosed [14C]-sulfatide. We now report the insertion of the full-length prosaposin cDNA into the Moloney murine leukemia virus-derived retroviral vector, pLJ, and the infection of cultured skin fibroblasts from a newly diagnosed and molecularly characterized patient with SAP-1 deficiency. The cultured cells infected with the prosaposin cDNA construct now show both production of normal levels of mature SAP-1 and completely normal metabolism of endocytosed [14C]-sulfatide. These studies demonstrate that the virally transferred prosaposin cDNA is processed normally and is localized within lysosomes, where it is needed for interaction between sulfatide and arylsulfatase A. In addition, normal as well as mutant sequences can now be found by allele-specific oligonucleotide hybridization of PCR-amplified genomic DNA by using exonic sequences as primers.
Sequential Protocol for C(sp3)–H Carboxylation with CO2: Transition-Metal-Catalyzed Benzylic C–H Silylation and Fluoride-Mediated Carboxylation (2012)

One of the most challenging transformations in current organic chemistry is the catalytic carboxylation of a C(sp(3))-H bond using CO(2) gas, an inexpensive and ubiquitous C1 source. A sequential protocol for C(sp(3))-H carboxylation by employing a nitrogen-directed, metal-assisted, C-H activation/catalytic silylation reaction in conjunction with fluoride-mediated carboxylation with CO(2) was established. The carboxylation proceeded only at the benzylic C(sp(3))-Si bond, not at the aromatic C(sp(2))-Si, which is advantageous for further manipulations of the products.
Baculovirus-mediated expression and purification of human serum paraoxonase 1A (2001)

Human paraoxonase 1 (hPON1) is a lipid-associated enzyme transported on HDL. There is considerable interest in hPON1 because of its putative antioxidative/antiatherogenic properties. We have created a recombinant baculovirus (BV) to generate hPON1A in large quantities for structure-function studies and here describe the method for production and isolation of the enzyme. A high level of recombinant hPON1 type A (rPON1A) was produced by Hi-5 insect cells (40 mg/l); a fraction ( approximately 10 mg/l) was secreted into the cell culture medium, but the majority ( approximately 30 mg/l) remained associated with the host insect cells. Cell-associated rPON1A was purified by detergent extraction (Tergitol NP-10) followed by three simple chromatography steps (DEAE-Sepharose, Sephacryl S-200, and concanavalin A). The purified enzyme bound to concanavalin A and was converted to a lower molecular mass by endoglycosidase H digestion, suggesting that rPON1A contained high-mannose N-glycan chains. There was a significant decrease in arylesterase activity (>99%) concomitant with enzymatic deglycosylation. rPON1A was dependent on Ca(2+) for arylesterase activity, exhibiting kinetic parameters similar to native hPON1A (K(m) = 3.8 +/- 2.1 vs. 3.7 +/- 2.0 mM and V(max) = 1,305 +/- 668 vs. 1,361 +/- 591 U/mg protein, rPON1A and hPON1A, respectively). Both rPON1A and hPON1A efficiently inhibited lipoxygenase-mediated peroxidation of phospholipid. In contrast to the arylesterase activity, which was sensitive to endoglycosidase H treatment, enzymatic deglycosylation did not inhibit the antioxidant activity of rPON1A. In conclusion, our BV-mediated PON1A expression system appears ideally suited for the production of relatively large quantities of rPON1A for structure-function studies.
Hormonal Regulation of the Differentiation of Cultured Ovarian Granulosa Cells* (1984)

In 1672, Regnier de Graaf first described the differentiation of ovarian follicles into the corpus luteum. He stated that “age and coitus cause very great changes in eggs (follicles). In young animals, they are very small and in more developed ones they are larger. After coitus, they (the follicles) so alter as to resemble the globules (the corpora lutea) …, being one or more according as the animal will produce one or more fetuses.” (1) Follicles as the functional unit: Ovarian follicles have since been shown to be the basic functional unit of the ovary and consist of an outer layer of theca interna cells which encircle inner layers of granulosa cells. Granulosa cells, in turn, surround the innermost oocyte-cumulus cell complex. The maturation of ovarian follicles and their transformation into corpora lutea is regulated by a specific set of hormones and has been a major research area for ovarian physiologists for several hundred years.
Intravenous immunoglobulin contains specific antibodies inhibitory to activation of T cells by staphylococcal toxin superantigens [see comment] (1993)

Superantigens are products of bacteria with dual affinity for HLA-DR and the variable region of the beta chain of the T cell receptor, leading to the stimulation of large numbers of T cells. Because there is evidence for the involvement of superantigens in various disease conditions in which intravenous IgG (IVIgG) is used as therapy, the purpose of the present study was to determine if IVIgG contains antibodies inhibitory to T cell stimulation by the superantigens. ELISA and Western assays revealed high concentrations of antibodies in the pooled IgG against eight different staphylococcal toxin (Staph-toxin) superantigens. The IVIgG inhibited in vitro stimulation of human peripheral blood T cells by the Staph-toxins, but did not inhibit responses elicited by phytohemagglutinin or anti-CD3. Inhibition was mediated by Staph-toxin-specific antibodies as shown by affinity adsorption depletion studies. The antibodies functioned by inhibiting the binding and/or presentation of Staph-toxins by DR+ accessory cells. In conclusion, this report is the first to show that normal pooled IgG contains antibodies against a major group of the superantigens, the Staph-toxins, and that the antibodies can inhibit Staph-toxin-elicited T cell activation, suggesting a possible immunoregulatory role for the antibodies in vivo.
Metallic Photonic Crystals Based on Solution-Processible Gold Nanoparticles (2006)

We demonstrate the fabrication of metallic photonic crystals, in the form of a periodic array of gold nanowires on a waveguide, by spin-coating a colloidal gold suspension onto a photoresist mask and subsequent annealing. The photoresist mask with a period below 500 nm is manufactured by interference lithography on an indium tin oxide (ITO) glass substrate, where the ITO layer has a thickness around 210 nm and acts as the waveguide. The width of the nanowires can be controlled from 100 to 300 nm by changing the duty cycle of the mask. During evaporation of solvent, the gold nanoparticles are drawn to the grooves of the grating with apparently complete dewetting off the photoresist for channels less than 2 microm in width, which therefore form nanowires after the annealing process. Strong coupling between the waveguide mode and the plasmon resonance of the nanowires, which is dependent on the polarization and incidence angle of the light wave, is demonstrated by optical extinction measurements. Continuity of the nanowires is confirmed by conductivity properties. Simplicity, high processing speed, and low cost are the main advantages of this method, which may have a plethora of applications in telecommunication, all-optical switching, sensors, and semiconductor devices.
Identification of the core proteins in proteoglycans synthesized by vascular endothelial cells (1989)

Proteoglycans, metabolically labelled with [3H]leucine and 35SO4(2-), were isolated from the spent media and from guanidinium chloride extracts of cultured human umbilical-vein endothelial cells by using isopycnic density-gradient centrifugation, gel filtration and ion-exchange h.p.l.c. The major proteoglycan species were subjected to SDS/polyacrylamide-gel electrophoresis before and after enzymic degradation of the polysaccharide chains. The cell extract contained mainly a heparan sulphate proteoglycan that has a buoyant density of 1.31 g/ml and a protein core with apparent molecular mass 300 kDa. The latter was heterogeneous and migrated as one major and one minor band. After reduction, the apparent molecular mass of the major band increased to approx. 350 kDa, indicating the presence of intrachain disulphide bonds. The proteoglycan binds to octyl-Sepharose and its polysaccharide chains are extensively degraded by heparan sulphate lyase. The proteoglycans of the medium contained 90% of all the incorporated 35SO4(2-). Here the predominant heparan sulphate proteoglycan was similar to that of the cell extract, but was more heterogeneous and contained an additional core protein with apparent molecular mass 210 kDa. Furthermore, two different chondroitin sulphate proteoglycans were found: one 200 kDa species with a high buoyant density (approx. 1.45 g/ml) and one 100 kDa species with low buoyant density (approx. 1.3 g/ml). Both these proteoglycans have a core protein of molecular mass approx. 47 kDa.