Minimum Evolution Tree of Genus Aleurocystidiellum (ribosomal RNA gene, 5.8S (partial), ITS-2 28S (partial)) The evolutionary history was inferred using the Minimum Evolution method. The optimal tree with the sum of branch length = 0.32675511 is shown. The confidence probability (multiplied by 100) that the interior branch length is greater than 0, as estimated using the bootstrap test (1000 replicates is shown next to the branches. The tree is drawn to scale, with branch lengths in the same units as those of the evolutionary distances used to infer the phylogenetic tree. The evolutionary distances were computed using the Maximum Composite Likelihood method and are in the units of the number of base substitutions per site. The ME tree was searched using the Close-Neighbor-Interchange (CNI) algorithm at a search level of 2. The Neighbor-joining algorithm was used to generate the initial tree. The analysis involved 19 nucleotide sequences. All positions with less than 95% site coverage were eliminated. That is, fewer than 5% alignment gaps, missing data, and ambiguous bases were allowed at any position. There were a total of 843 positions in the final dataset. Evolutionary analyses were conducted in MEGA5. Phylogenetic and molecular evolutionary analyses were conducted using MEGA version 5 (Tamura, Peterson, Peterson, Stecher, Nei, and Kumar 2011). All sequences were obtained from the Genbank and were aligned by the Muscle algorithm with standard settings.
Figure. Evolutionary relationships of Aleurocystidiellum Minimum Evolution Tree of Genus Aleurocystidiellum ( ribosomal RNA gene, 5.8S (partial), ITS-2 28S (partial)) The evolutionary history was inferred using the Minimum Evolution method. The optimal tree with the sum of branch length = 0.32675511 is shown. The confidence probability (multiplied by 100) that the interior branch length is greater than 0, as estimated using the bootstrap test (1000 replicates is shown next to the branches. The tree is drawn to scale, with branch lengths in the same units as those of the evolutionary distances used to infer the phylogenetic tree. The evolutionary distances were computed using the Maximum Composite Likelihood method and are in the units of the number of base substitutions per site. The ME tree was searched using the Close-Neighbor-Interchange (CNI) algorithm at a search level of 2. The Neighbor-joining algorithm was used to generate the initial tree. The analysis involved 19 nucleotide sequences. All positions with less than 95% site coverage were eliminated. That is, fewer than 5% alignment gaps, missing data, and ambiguous bases were allowed at any position. There were a total of 843 positions in the final dataset. Evolutionary analyses were conducted in MEGA5. Phylogenetic and molecular evolutionary analyses were conducted using MEGA version 5 (Tamura, Peterson, Peterson, Stecher, Nei, and Kumar 2011). All sequences were obtained from the Genbank and were aligned by the Muscle algorithm with standard settings. List of the GenBank Sequences Aleurocystidiellum disciforme - AF506402 Aleurocystidiellum disciforme strain T629 Aleurocystidiellum subcruentatum - AF506403 Aleurodiscus scutellatus - AJ406497 Gloiodon nigrescens - AF506450 Lentinellus ursinus strain EL73-97 Lentinellus auricula strain KGN280994 Lentinellus cochleatus strain KGN960928 Scytinostromella nannfeldtii strain NH7476 Gloeocystidiellum bisporum - AY048877 Gloeocystidiellum clavuligerum strain FCUG2159 Echinodontium tinctorium - AF506430 Bondarzewia montana isolate AFTOL-ID 452 Heterobasidion annosum - AF347096 Hericium coralloides - AF506459 Hericium cirrhatum - AF506385 Hericium americanum - AF506458 Junghuhnia micropora isolate X615 Postia placenta isolate 4004