Figure 3: Phylogenetic distribution of known and predicted αr14 genes. Gene numbers are based on computational analysis using the program Infernal. Shadowed in red are the closer homologs with high Infernal E-values and bit scores. Legend: αr14_Smr14C2 = Sinorhizobium meliloti 1021 (NC_003047) (NC_010994), αr14_Smr14C3 = Sinorhizobium meliloti 1021 (NC_003047) (NC_011985), αr14_Smedr14C1 = Sinorhizobium medicae WSM419 chromosome (NC_009636) (NC_011983), αr14_Smedr14C2 = Sinorhizobium medicae WSM419 chromosome (NC_009636) (NC_011369), αr14_ReCIATr14C3 = Rhizobium etli CIAT 652 (NC_010994) (NC_012850), αr14_Atr14C2 = Agrobacterium tumefaciens str. C58 chromosome linear (NC_003063) (NC_007761), αr14_Rlt1325r14C2 = Rhizobium leguminosarum bv. trifolii WSM1325 (NC_012850) (NC_012441), αr14_ReCFNr14C2 = Rhizobium etli CFN 42 (NC_007761) (NC_010994), αr14_Rlt2304r14C2 = Rhizobium leguminosarum bv. trifolii WSM2304 chromosome (NC_011369) (NC_011985), αr14_AH13r14C1 = Agrobacterium sp. H13-3 chromosome (NC_015183) (NC_011983), αr14_Sfr14C2 = Sinorhizobium fredii NGR234 chromosome (NC_012587) (NC_011369), αr14_Sfr14C1 = Sinorhizobium fredii NGR234 chromosome (NC_012587) (NC_012850), αr14_Rlt2304r14C1 = Rhizobium leguminosarum bv. trifolii WSM2304 chromosome (NC_011369) (NC_007761), αr14_Atr14C1 = Agrobacterium tumefaciens str. C58 chromosome circular (NC_003062) (NC_012441), αr14_ReCIATr14C1 = Rhizobium etli CIAT 652 (NC_010994) (NC_010994), αr14_Rlvr14C1 = Rhizobium leguminosarum bv. viciae 3841 (NC_008380) (NC_011985), αr14_ReCFNr14C1 = Rhizobium etli CFN 42 (NC_007761) (NC_011983), αr14_Avr14CI1 = Agrobacterium vitis S4 chromosome 1 chromosome 1 (NC_011989) (NC_011369), αr14_Arr14CI2 = Agrobacterium radiobacter K84 chromosome 1 (NC_011985) (NC_012850), αr14_ReCIATr14C4 = Rhizobium etli CIAT 652 (NC_010994) (NC_007761), αr14_Rlt1325r14C1 = Rhizobium leguminosarum bv. trifolii WSM1325 (NC_012850) (NC_012441), αr14_Avr14CI2 = Agrobacterium vitis S4 chromosome 1 chromosome 1 (NC_011989) (NC_010994), αr14_Sfr14b = Sinorhizobium fredii NGR234 plasmid pNGR234b (NC_012586) (NC_011985), αr14_Arr14CI3 = Agrobacterium radiobacter K84 chromosome 1 (NC_011985) (NC_011983), αr14_ReCFNr14C3 = Rhizobium etli CFN 42 (NC_007761) (NC_011369), αr14_Rlt1325r14C3 = Rhizobium leguminosarum bv. trifolii WSM1325 (NC_012850) (NC_012850), αr14_Rlvr14C3 = Rhizobium leguminosarum bv. viciae 3841 (NC_008380) (NC_007761), αr14_Rlt2304r14C3 = Rhizobium leguminosarum bv. trifolii WSM2304 chromosome (NC_011369) (NC_012441), αr14_Arr14Atc = Agrobacterium radiobacter K84 plasmid pAtK84c (NC_011987) (NC_010994), αr14_Arr14CII1 = Agrobacterium radiobacter K84 chromosome 2 (NC_011983) (NC_011985), αr14_Smr14B = Sinorhizobium meliloti 1021 plasmid pSymB (NC_003078) (NC_011983), αr14_Avr14CII1 = Agrobacterium vitis S4 chromosome 2 (NC_011988) (NC_011369), αr14_Smedr14p01 = Sinorhizobium medicae WSM419 plasmid pSMED01 (NC_009620) (NC_012850), αr14_Rlt1325r14p05 = Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505 (NC_012854) (NC_007761), αr14_Rlt1325r14p02 = Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502(NC_012858) (NC_012441), αr14_Smedr14p022 = Sinorhizobium medicae WSM419 plasmid pSMED02 (NC_009621) (NC_010994), αr14_Rlvr14p11 = Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11 (NC_008384) (NC_011985), αr14_Arr14CII2 = Agrobacterium radiobacter K84 chromosome 2 (NC_011983) (NC_011983), αr14_Arr14CI1 = Agrobacterium radiobacter K84 chromosome 1 (NC_011985) (NC_011369), αr14_ReCFNr14e = Rhizobium etli CFN 42 plasmid p42e (NC_007765) (NC_012850), αr14_Rlt1325r14p012 = Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501 (NC_012848) (NC_007761), αr14_Rlt2304r14p02 = Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pR132501 (NC_011366) (NC_012441), αr14_Rlt2304r14p012 = Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pR132501 (NC_011368) (NC_010994), αr14_Rlt1325r14p04 = Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132504 (NC_012852) (NC_011985), αr14_Avr14CI3 = Agrobacterium vitis S4 chromosome 1 (NC_011989) (NC_011983), αr14_ReCIATr14A = Rhizobium etli CIAT 652 plasmid pA (NC_010998) (NC_011369), αr14_MsBCNr14C1 = Mesorhizobium sp. BNC1 (NC_008254) (NC_012850), αr14_Avr14CII2 = Agrobacterium vitis S4 chromosome 2 (NC_011988) (NC_007761), αr14_Avr14Atc = Agrobacterium vitis S4 plasmid pAtS4c (NC_011984) (NC_012441), αr14_ReCIATr14C2 = Rhizobium etli CIAT 652 (NC_010994) (NC_010994), αr14_Atr14C3 = Agrobacterium tumefaciens str. C58 chromosome linear (NC_003063) (NC_011985), αr14_ReCIATr14B = Rhizobium etli CIAT 652 plasmid pB (NC_010996) (NC_011983), αr14_ReCFNr14d = Rhizobium etli CFN 42 symbiotic plasmid p42d (NC_004041) (NC_011369), αr14_Sfr14C3 = Sinorhizobium fredii NGR234 chromosome (NC_012587) (NC_012850), αr14_Smedr14C3 = Sinorhizobium medicae WSM419 chromosome (NC_009636) (NC_007761), αr14_Smr14C1 = Sinorhizobium meliloti 1021 (NC_003047) (NC_012441), αr14_Mlr14C1 = Mesorhizobium loti MAFF303099 chromosome (NC_002678) (NC_010994), αr14_Mlr14C2 = Mesorhizobium loti MAFF303099 chromosome (NC_002678) (NC_011985), αr14_Smr14A1 = Sinorhizobium meliloti 1021 plasmid pSymA (NC_003037) (NC_011983), αr14_Rlvr14p12 = Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12 (NC_008378) (NC_011369), αr14_Mcr14C1 = Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome (NC_014923) (NC_012850), αr14_Mcr14C2 = Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome (NC_014923) (NC_007761), αr14_Oar14CI1 = Ochrobactrum anthropi ATCC 49188 chromosome 1 (NC_009667) (NC_012441), αr14_Oar14CII1 = Ochrobactrum anthropi ATCC 49188 chromosome 2 (NC_009668) (NC_010994), αr14_Smr14A2 = Sinorhizobium meliloti 1021 plasmid pSymA (NC_003037) (NC_011985), αr14_Oar14CI2 = Ochrobactrum anthropi ATCC 49188 chromosome 1 (NC_009667) (NC_011983), αr14_Rlt1325r14p011 = Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501 (NC_012848) (NC_011369), αr14_MsBCNr14C2 = Mesorhizobium sp. BNC1 (NC_008254) (NC_012850), αr14_Bs23445r14CI1 = Brucella suis ATCC 23445 chromosome I (NC_010169) (NC_007761), αr14_Bmir14CI1 = Brucella microti CCM 4915 chromosome I (NC_013119) (NC_012441), αr14_Bor14CI1 = Brucella ovis ATCC 25840 chromosome I (NC_009505) (NC_010994), αr14_Bcr14CI1 = Brucella canis ATCC 23365 chromosome I (NC_010103) (NC_011985), αr14_Bm23457r14CI1 = Brucella melitensis ATCC 23457 chromosome I (NC_012441) (NC_011983), αr14_BaS19r14CI1 = Brucella abortus S19 chromosome I (NC_010742) (NC_011369), αr14_Ba19941r14CI1 = Brucella abortus bv. 1 str. 9-941 chromosome I (NC_006932) (NC_012850), αr14_Bmar14CI1 = Brucella melitensis biovar Abortus 2308 chromosome I (NC_007618) (NC_007761), αr14_Bs1330r14CI1 = Brucella suis 1330 chromosome I (NC_004310) (NC_012441), αr14_Smedr14p021 = Sinorhizobium medicae WSM419 plasmid pSMED02 (NC_009621) (NC_010994), αr14_ReCFNr14f = Rhizobium etli CFN 42 plasmid p42f (NC_007766) (NC_011985), αr14_Oar14CII2 = Ochrobactrum anthropi ATCC 49188 chromosome 2 (NC_009668) (NC_011983), αr14_Rlt2304r14p011 = Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201 (NC_011368) (NC_011369), αr14_Mcr14p01 = Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome I (NC_014918) (NC_012850), αr14_Mcr14CI4 = Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome I (NC_014923) (NC_007761), αr14_Mcr14CI5 = Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome I (NC_014923) (NC_012441), αr14_Bor14CI2 = Brucella ovis ATCC 25840 chromosome I (NC_009505) (NC_010994), αr14_Bcr14CI2 = Brucella canis ATCC 23365 chromosome I (NC_010103) (NC_011985), αr14_Bs23445r14CI2 = Brucella suis ATCC 23445 chromosome I (NC_010169) (NC_011983), αr14_Bmir14CI2 = Brucella microti CCM 4915 chromosome 1 (NC_013119) (NC_011369), αr14_Bs1330r14CI2 = Brucella suis 1330 chromosome I (NC_004310) (NC_012850), αr14_Mlr14C5 = Mesorhizobium loti MAFF303099 chromosome (NC_002678) (NC_007761), αr14_Bm16Mr14CI1 = Brucella melitensis bv. 1 str. 16M chromosome (NC_003317) (NC_012441), αr14_BaS19r14CI2 = Brucella abortus S19 chromosome 1 (NC_010742) (NC_010994), αr14_Bm23457r14CI2 = Brucella melitensis ATCC 23457 chromosome I (NC_012441) (NC_011985), αr14_Ba19941r14CI2 = Brucella abortus bv. 1 str. 9-941 chromosome I (NC_006932) (NC_011983), αr14_Bmar14CI2 = Brucella melitensis biovar Abortus 2308 chromosome I (NC_007618) (NC_011369), αr14_MsBCNr14p1 = Mesorhizobium sp. BNC1 plasmid 1 (NC_008242) (NC_012850), αr14_Mlr14C4 = Mesorhizobium loti MAFF303099 chromosome (NC_002678) (NC_007761), αr14_Rlvr14C2 = Rhizobium leguminosarum bv. viciae 3841 (NC_008380) (NC_012441).
English: Phylogenetic distribution of known and predicted αr14 genes. Gene numbers are based on computational analysis using the program Infernal. Shadowed in red are the closer homologs with high Infernal E-values and bit scores. Legend: αr14_Smr14C2 = Sinorhizobium meliloti 1021 (NC_003047) (NC_010994), αr14_Smr14C3 = Sinorhizobium meliloti 1021 (NC_003047) (NC_011985), αr14_Smedr14C1 = Sinorhizobium medicae WSM419 chromosome (NC_009636) (NC_011983), αr14_Smedr14C2 = Sinorhizobium medicae WSM419 chromosome (NC_009636) (NC_011369), αr14_ReCIATr14C3 = Rhizobium etli CIAT 652 (NC_010994) (NC_012850), αr14_Atr14C2 = Agrobacterium tumefaciens str. C58 chromosome linear (NC_003063) (NC_007761), αr14_Rlt1325r14C2 = Rhizobium leguminosarum bv. trifolii WSM1325 (NC_012850) (NC_012441), αr14_ReCFNr14C2 = Rhizobium etli CFN 42 (NC_007761) (NC_010994), αr14_Rlt2304r14C2 = Rhizobium leguminosarum bv. trifolii WSM2304 chromosome (NC_011369) (NC_011985), αr14_AH13r14C1 = Agrobacterium sp. H13-3 chromosome (NC_015183) (NC_011983), αr14_Sfr14C2 = Sinorhizobium fredii NGR234 chromosome (NC_012587) (NC_011369), αr14_Sfr14C1 = Sinorhizobium fredii NGR234 chromosome (NC_012587) (NC_012850), αr14_Rlt2304r14C1 = Rhizobium leguminosarum bv. trifolii WSM2304 chromosome (NC_011369) (NC_007761), αr14_Atr14C1 = Agrobacterium tumefaciens str. C58 chromosome circular (NC_003062) (NC_012441), αr14_ReCIATr14C1 = Rhizobium etli CIAT 652 (NC_010994) (NC_010994), αr14_Rlvr14C1 = Rhizobium leguminosarum bv. viciae 3841 (NC_008380) (NC_011985), αr14_ReCFNr14C1 = Rhizobium etli CFN 42 (NC_007761) (NC_011983), αr14_Avr14CI1 = Agrobacterium vitis S4 chromosome 1 chromosme 1 (NC_011989) (NC_011369), αr14_Arr14CI2 = Agrobacterium radiobacter K84 chromosome 1 (NC_011985) (NC_012850), αr14_ReCIATr14C4 = Rhizobium etli CIAT 652 (NC_010994) (NC_007761), αr14_Rlt1325r14C1 = Rhizobium leguminosarum bv. trifolii WSM1325 (NC_012850) (NC_012441), αr14_Avr14CI2 = Agrobacterium vitis S4 chromosome 1 chromosme 1 (NC_011989) (NC_010994), αr14_Sfr14b = Sinorhizobium fredii NGR234 plasmid pNGR234b (NC_012586) (NC_011985), αr14_Arr14CI3 = Agrobacterium radiobacter K84 chromosome 1 (NC_011985) (NC_011983), αr14_ReCFNr14C3 = Rhizobium etli CFN 42 (NC_007761) (NC_011369), αr14_Rlt1325r14C3 = Rhizobium leguminosarum bv. trifolii WSM1325 (NC_012850) (NC_012850), αr14_Rlvr14C3 = Rhizobium leguminosarum bv. viciae 3841 (NC_008380) (NC_007761), αr14_Rlt2304r14C3 = Rhizobium leguminosarum bv. trifolii WSM2304 chromosome (NC_011369) (NC_012441), αr14_Arr14Atc = Agrobacterium radiobacter K84 plasmid pAtK84c (NC_011987) (NC_010994), αr14_Arr14CII1 = Agrobacterium radiobacter K84 chromosome 2 (NC_011983) (NC_011985), αr14_Smr14B = Sinorhizobium meliloti 1021 plasmid pSymB (NC_003078) (NC_011983), αr14_Avr14CII1 = Agrobacterium vitis S4 chromosome 2 (NC_011988) (NC_011369), αr14_Smedr14p01 = Sinorhizobium medicae WSM419 plasmid pSMED01 (NC_009620) (NC_012850), αr14_Rlt1325r14p05 = Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505 (NC_012854) (NC_007761), αr14_Rlt1325r14p02 = Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502(NC_012858) (NC_012441), αr14_Smedr14p022 = Sinorhizobium medicae WSM419 plasmid pSMED02 (NC_009621) (NC_010994), αr14_Rlvr14p11 = Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11 (NC_008384) (NC_011985), αr14_Arr14CII2 = Agrobacterium radiobacter K84 chromosome 2 (NC_011983) (NC_011983), αr14_Arr14CI1 = Agrobacterium radiobacter K84 chromosome 1 (NC_011985) (NC_011369), αr14_ReCFNr14e = Rhizobium etli CFN 42 plasmid p42e (NC_007765) (NC_012850), αr14_Rlt1325r14p012 = Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501 (NC_012848) (NC_007761), αr14_Rlt2304r14p02 = Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pR132501 (NC_011366) (NC_012441), αr14_Rlt2304r14p012 = Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pR132501 (NC_011368) (NC_010994), αr14_Rlt1325r14p04 = Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132504 (NC_012852) (NC_011985), αr14_Avr14CI3 = Agrobacterium vitis S4 chromosme 1 (NC_011989) (NC_011983), αr14_ReCIATr14A = Rhizobium etli CIAT 652 plasmid pA (NC_010998) (NC_011369), αr14_MsBCNr14C1 = Mesorhizobium sp. BNC1 (NC_008254) (NC_012850), αr14_Avr14CII2 = Agrobacterium vitis S4 chromosome 2 (NC_011988) (NC_007761), αr14_Avr14Atc = Agrobacterium vitis S4 plasmid pAtS4c (NC_011984) (NC_012441), αr14_ReCIATr14C2 = Rhizobium etli CIAT 652 (NC_010994) (NC_010994), αr14_Atr14C3 = Agrobacterium tumefaciens str. C58 chromosome linear (NC_003063) (NC_011985), αr14_ReCIATr14B = Rhizobium etli CIAT 652 plasmid pB (NC_010996) (NC_011983), αr14_ReCFNr14d = Rhizobium etli CFN 42 symbiotic plasmid p42d (NC_004041) (NC_011369), αr14_Sfr14C3 = Sinorhizobium fredii NGR234 chromosome (NC_012587) (NC_012850), αr14_Smedr14C3 = Sinorhizobium medicae WSM419 chromosome (NC_009636) (NC_007761), αr14_Smr14C1 = Sinorhizobium meliloti 1021 (NC_003047) (NC_012441), αr14_Mlr14C1 = Mesorhizobium loti MAFF303099 chromosome (NC_002678) (NC_010994), αr14_Mlr14C2 = Mesorhizobium loti MAFF303099 chromosome (NC_002678) (NC_011985), αr14_Smr14A1 = Sinorhizobium meliloti 1021 plasmid pSymA (NC_003037) (NC_011983), αr14_Rlvr14p12 = Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12 (NC_008378) (NC_011369), αr14_Mcr14C1 = Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome (NC_014923) (NC_012850), αr14_Mcr14C2 = Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome (NC_014923) (NC_007761), αr14_Oar14CI1 = Ochrobactrum anthropi ATCC 49188 chromosome 1 (NC_009667) (NC_012441), αr14_Oar14CII1 = Ochrobactrum anthropi ATCC 49188 chromosome 2 (NC_009668) (NC_010994), αr14_Smr14A2 = Sinorhizobium meliloti 1021 plasmid pSymA (NC_003037) (NC_011985), αr14_Oar14CI2 = Ochrobactrum anthropi ATCC 49188 chromosome 1 (NC_009667) (NC_011983), αr14_Rlt1325r14p011 = Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501 (NC_012848) (NC_011369), αr14_MsBCNr14C2 = Mesorhizobium sp. BNC1 (NC_008254) (NC_012850), αr14_Bs23445r14CI1 = Brucella suis ATCC 23445 chromosome I (NC_010169) (NC_007761), αr14_Bmir14CI1 = Brucella microti CCM 4915 chromosome I (NC_013119) (NC_012441), αr14_Bor14CI1 = Brucella ovis ATCC 25840 chromosome I (NC_009505) (NC_010994), αr14_Bcr14CI1 = Brucella canis ATCC 23365 chromosome I (NC_010103) (NC_011985), αr14_Bm23457r14CI1 = Brucella melitensis ATCC 23457 chromosome I (NC_012441) (NC_011983), αr14_BaS19r14CI1 = Brucella abortus S19 chromosome I (NC_010742) (NC_011369), αr14_Ba19941r14CI1 = Brucella abortus bv. 1 str. 9-941 chromosome I (NC_006932) (NC_012850), αr14_Bmar14CI1 = Brucella melitensis biovar Abortus 2308 chromosome I (NC_007618) (NC_007761), αr14_Bs1330r14CI1 = Brucella suis 1330 chromosome I (NC_004310) (NC_012441), αr14_Smedr14p021 = Sinorhizobium medicae WSM419 plasmid pSMED02 (NC_009621) (NC_010994), αr14_ReCFNr14f = Rhizobium etli CFN 42 plasmid p42f (NC_007766) (NC_011985), αr14_Oar14CII2 = Ochrobactrum anthropi ATCC 49188 chromosome 2 (NC_009668) (NC_011983), αr14_Rlt2304r14p011 = Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201 (NC_011368) (NC_011369), αr14_Mcr14p01 = Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome I (NC_014918) (NC_012850), αr14_Mcr14CI4 = Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome I (NC_014923) (NC_007761), αr14_Mcr14CI5 = Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome I (NC_014923) (NC_012441), αr14_Bor14CI2 = Brucella ovis ATCC 25840 chromosome I (NC_009505) (NC_010994), αr14_Bcr14CI2 = Brucella canis ATCC 23365 chromosome I (NC_010103) (NC_011985), αr14_Bs23445r14CI2 = Brucella suis ATCC 23445 chromosome I (NC_010169) (NC_011983), αr14_Bmir14CI2 = Brucella microti CCM 4915 chromosome 1 (NC_013119) (NC_011369), αr14_Bs1330r14CI2 = Brucella suis 1330 chromosome I (NC_004310) (NC_012850), αr14_Mlr14C5 = Mesorhizobium loti MAFF303099 chromosome (NC_002678) (NC_007761), αr14_Bm16Mr14CI1 = Brucella melitensis bv. 1 str. 16M chromosome (NC_003317) (NC_012441), αr14_BaS19r14CI2 = Brucella abortus S19 chromosome 1 (NC_010742) (NC_010994), αr14_Bm23457r14CI2 = Brucella melitensis ATCC 23457 chromosome I (NC_012441) (NC_011985), αr14_Ba19941r14CI2 = Brucella abortus bv. 1 str. 9-941 chromosome I (NC_006932) (NC_011983), αr14_Bmar14CI2 = Brucella melitensis biovar Abortus 2308 chromosome I (NC_007618) (NC_011369), αr14_MsBCNr14p1 = Mesorhizobium sp. BNC1 plasmid 1 (NC_008242) (NC_012850), αr14_Mlr14C4 = Mesorhizobium loti MAFF303099 chromosome (NC_002678) (NC_007761), αr14_Rlvr14C2 = Rhizobium leguminosarum bv. viciae 3841 (NC_008380) (NC_012441).