fairdataihub/envision-eye-imaging-training-data huggingface dataset:
Vizgen MERFISH files for Single-cell analysis reveals M. tuberculosis ESX-1-mediated accumulation of anti-inflammatory macrophages in infected mouse lungs Mycobacterium tuberculosis (MTB) ESX-1, a type VII secretion system, is a key virulence determinant contributing to MTB’s survival within lung mononuclear phagocytes (MNPs), but its effect on MNP recruitment and differentiation remains unknown. Here, using multiple single-cell RNA sequencing techniques, we studied the role of ESX-1 in MNP
Systematic positions and taxonomy of two freshwater ciliates found in China, with establishments of one new family and two new species (Ciliophora, Oligohymenophorea) This dataset contains the digitized treatments in Plazi based on the original journal article Wang, Xiang, Liu, Lihui, Wang, Jialu, Wang, Xiaosong, Wang, Jiarui, Wang, Li, Zhao, Lv, Pan, Xuming (2025): Systematic positions and taxonomy of two freshwater ciliates found in China, with establishments of one new family and two new
Optical correction and evolution of hipermetropy Abstract Objective: To compare changes in refraction and ocular biometric parameters in hyperopic children with and without full optical correction. Methods: Non-randomized prospecting study with 41 subjects (21 males and 20 females) aged 4 to 6 years with accommodative esotropia and or hyperopia between 3 to 6 diopters, select in Hospital Geral Universitário and Oftalmocenter Santa Rosa. The patients were divided in two groups: group 1 for
English Longitudinal Study of Ageing: Waves 1-10, 2002-2023: Census 2001 Middle Layer Super Output Areas: Secure Access

The English Longitudinal Study of Ageing (ELSA) study is a longitudinal survey of ageing and quality of life among older people that explores the dynamic relationships between health and functioning, social networks and participation, and economic position as people plan for, move into and progress beyond
Ocular lens morphology is influenced by ecology and metamorphosis in frogs and toads The shape and relative size of an ocular lens affects the focal length of the eye, with consequences for visual acuity and sensitivity. Lenses are typically spherical in aquatic animals with camera-type eyes and axially flattened in terrestrial species to facilitate vision in optical media with different refractive indices. Frogs and toads (Amphibia: Anura) are ecologically diverse, with many species
SuperDARN Grid data in netCDF format (1999-Oct) 1999-Oct SuperDARN radar data in netCDF format. These files were produced using versions 3.0 of the public FitACF and make_grid algorithms, using the AACGM v2 coordinate system. Cite this dataset if using our data in a publication. The RST is available here: https://github.com/SuperDARN/rst The research enabled by SuperDARN is due to the efforts of teams of scientists and engineers working in many countries to build and operate radars, process
30 Rue Gaston Guillemet, Fontenay-Le-Comte [30 Rue Gaston Guillemet (street view)](https://www.google.com/maps/@46.4675455,-0.8066105,3a,54.4y,30.54h,84.52t/data=!3m7!1e1!3m5!1sNhRLHt3at5kb4gMPyzuyAQ!2e0!5s20171001T000000!7i13312!8i6656). Friendly cat included. Seems related to the one in the google street view shot from oct 17-2017: ![](https://imgfz.com/i/Oi0CmZ6.jpeg) Source: Objaverse 1.0 / Sketchfab
1713 Gravestone Garvald and Bara Kirk Gravestone within Garvald and Bara Kirkyard, Garvald, East Lothian, Scotland Inscription on rear visible on matcap reads: 1713 Here Lyes Allexander Gillie who died the 29th Dec 1704 his age 74 years also Jayet Happer spouse who died the ?? Oct 1712 her age 78 Source: Objaverse 1.0 / Sketchfab
National Health and Nutrition Examination Survey (NHANES), 2007-2008 The National Health and Nutrition Examination Surveys (NHANES) is a program of studies designed to assess the health and nutritional status of adults and children in the United States. The NHANES combines personal interviews and physical examinations, which focus on different population groups or health topics. These surveys have been conducted by the National Center for Health Statistics (NCHS) on a periodic basis from 1971
CellBinDB: A Large-Scale Multimodal Annotated Dataset CellBinDB is a large-scale, multimodal annotated dataset for cell segmentation. It contains 1,044 annotated microscope images and 109,083 cell annotations, covering four staining types: DAPI, ssDNA, H&E, and mIF. CellBinDB contains samples from two species, human and mouse, covering more than 30 histologically different tissue types, including disease-related tissues. The images in CellBinDB come from two sources: 844 mouse images from
Doodleverse/Segmentation Zoo Res-UNet models for Aerial/nadir/2-class (water, nowater) segmentation of RGB 1024x768 high-res. images Doodleverse/Segmentation Zoo Res-UNet models for Aerial/nadir/2-class (water, nowater) segmentation of RGB 1024x768 high-res. images These Residual-UNet models have been created using Segmentation Gym* using the following dataset**: Image size used by model: 1024 x 768 x 3 pixels classes:	water	other File descriptions For each
Label-free and fluorescent imaging data of microparticle association with Salmon Keratocytes The dataset contains multimodal and multidimensional microscopy images of the interactions between different microparticles either in skin keratocytes cells (SKC) or in corneal keratocyte cells (CKC) of Atlantic Salmon. All images were captured at room temperature, and the dataset includes both test (with microparticles) and control (without microparticles) conditions. These interactions were captured
Code and example simulations of phase-field crystal model (for cone mosaic formation) The most important part of this deposit is the code necessary for simulating the anisotropic phase-field crystal on a cone geometry. The second most important is the code for analyzing the simulation results, including the spatial distribution of Y-junctions in the simulated retinae. Included are simulation results in which we systematically scan both the undercooling parameters and the strength of noise in
Pediatric Ocular Rosacea: Clinical Features and Long-Term Maintenance Therapy with Topical Cyclosporine To evaluate the clinical presentations, visual outcomes, meibography, and non-invasive tear break-up time (NIBUT) findings in pediatric ocular rosacea (OR) patients receiving maintenance therapy with topical cyclosporine. This retrospective study reviewed medical records of patients under 16 years diagnosed with OR. Demographic characteristics, corneal involvement, delayed diagnosis, and
Supplementary Data Codes Three-dimensional imaging of individual carbon atoms Na Yeon Kim1*, Hanfeng Zhong1,2*, Jianhua Zhang3*, Colum M. O’Leary1*, Yuxuan Liao1, Ji Zou4, Haozhi Sha1, Minh Pham1, Weiyi Li1, Yakun Yuan1, Ji-Hoon Park5, Dennis Kim6, Huaidong Jiang3, Jing Kong5, Miaofang Chi7, Jianwei Miao1†, 1Department of Physics and Astronomy and California NanoSystems Institute, University of California, Los Angeles, CA, USA.2Department of Electrical and Computer Engineering, University of
Embrapa Wine Grape Instance Segmentation Dataset – Embrapa WGISD Embrapa Wine Grape Instance Segmentation Dataset – Embrapa WGISD For a detailed description of this dataset, following the datasheet for the datasets recommendation proposed by Gebru et al. , check the README.md file. Motivation for Dataset Creation Why was the dataset created? Embrapa WGISD ( Wine Grape Instance Segmentation Dataset ) was created to provide images and annotation to study object detection
Reduced evolutionary constraint accompanies ongoing radiation in deep-sea anglerfishes Colonization of a novel habitat is often followed by phenotypic diversification in the wake of ecological opportunity. However, some habitats should be inherently more constraining than others if the challenges of that environment offer few evolutionary solutions. We examined this push-and-pull on macroevolutionary diversification following habitat transitions in the anglerfishes (Lophiiformes). We
Juvenile alewives (Alosa pseudoharengus): Size, growth, and date of emigration from natal lake This dataset supports an investigation into how the growth of young alewives (Alosa pseudoharengus) is affected when they are unable to migrate from the lake in which they hatched to the sea. Fish were sampled at the outlet of Bride Lake in East Lyme, Connecticut, USA, during a non-drought year and a prolonged drought year in which their migration was blocked when the exit stream dried
SuperDARN data in netCDF format (2016-Oct) 2016-Oct SuperDARN radar data in netCDF format. These files were produced using versions 2.5 and 3.0 of the public FitACF algorithm, using the AACGM v2 coordinate system. Cite this dataset if using our data in a publication. The RST is available here: https://github.com/SuperDARN/rst The research enabled by SuperDARN is due to the efforts of teams of scientists and engineers working in many countries to build and operate radars, process data and
Self-Supervised Maize Kernel Classification and Segmentation for Embryo Identification These are companion data and models of manuscript "Self-Supervised Maize Kernel Classification and Segmentation for Embryo Identification" that was submitted to Frontiers in Plant Science. The data is organized into three main folders: 'class_full_imgs', 'seg_full_imgs', and 'unlabeled'. The 'class_full_imgs' folder contains labeled data used to train the classification model, which is divided into
Grapevine leaf lobe detection model From the segmented RGB mask of a leaf, full vein prediction mask, primary vein prediction mask, midvein prediction mask, and the predicted coordinate of the petiolar junction, a pixel segmentation model that classifies the blade of the leaf as the midvein lobe, distal lobes, proximal lobes, or primary vasculature. (Note that transformations on the training data are recorded in the folder of the full vein prediction model.) The following is a summary showing
UTH FPGA Telemetry Dataset for ML Inference Experiments on AMD/Xilinx ZCU102 MPSoC Development Board 📌 Overview This dataset contains telemetry traces from repeated machine learning inference experiments executed on a Xilinx ZCU102 FPGA platform.Each experiment corresponds to a specific DPU bitstream configuration (DPU size and number of DPU compute units), a model variant (including pruning variants), and a system workload mode applied on the ARM CPU. The dataset is intended to support
Tree and other plant species occurrences in the Valparai Plateau and Anamalai Tiger Reserve, Western Ghats, India This dataset includes data on occurrences of 11 threatened tree species, trees recorded in point-centred quarter (PCQ) plots around many individuals of those 11 tree species, and an inventory of plant species along 65 trails surveyed between Oct 2020 to Mar 2022 in rainforests of the Valparai Plateau and Anamalai Tiger Reserve, Western Ghats, India. Occurrence Observation Tropical
Indian Footpath Damage Segmentation Dataset The **Indian Footpath Damage Segmentation Dataset** comprises **583 real-world footpath images** collected from diverse urban environments in India, along with their corresponding **pixel-wise segmentation masks** indicating damage regions. This dataset is intended for use in semantic segmentation tasks to detect and assess footpath damage severity, supporting research in pedestrian safety, civil infrastructure monitoring, and smart city applications.
Supplementary Material for: Improvement in Dry Age-Related Macular Degeneration with Photobiomodulation Introduction: This case report describes a finding of dramatic improvement in drusen volume and visual acuity in a 73-year-old patient diagnosed with dry age-related macular degeneration (AMD) undergoing daily home photobiomodulation alongside AREDS-2 supplements. Presentation: This is a retrospective review of a case presentation from 2023-2024. After 8 months of continuous home
Data for Epstein-Barr Virus Orchestrates Spatial Reorganization and Immunomodulation within the classical Hodgkin Lymphoma Tumor Microenvironment Here is a brief description of each data: MIBI_data contains the MIBI proteomics image, segmentation masks, and the annotated proteomics dataframe. GeoMx_data contains the GeoMx proteomics image, segmentation masks, annotated proteomics dataframe, and transcriptomics count table. CosMx_data contains the Seurat object used for all CosMx
VAT 17980 - RTI dataset The dataset comprises the RTI-data of the cuneiform tablet VAT 17980 (N5:113). RTI = Reflectance Transformation Imaging (RTI) is a computational photographic method that captures a subject's surface shape and color and enables the interactive re-lighting of the subject from any direction in a software viewer, revealing details not visible with the naked eye (cf. https://culturalheritageimaging.org/). Babylon Cuneiform Neo-Babylonian
Retinal S-cone specific anatomical and physiological data in the thirteen-lined ground squirrel Original data corresponding to the PNAS (2025) publication titled "S-cone specific circuitry in the outer plexiform layer of a cone-dominant mammal." Data is organized by type: Reconstructions, Electrophysiology, Electroretinography, and Immunohistochemistry. Additonal software may be required to view data files. Where applicable, README files have been included with brief explanations. A 3D PDF
In Situ Volumetric Imaging and Analysis of FRESH 3D Bioprinted Constructs Using Optical Coherence Tomography (Data and 3D models) These files contain 3D models and reconstructions of the 3D printed models after OCT imaging of the brain stem, circle of willis, kidney, vestibular apparatus, mixing network, and resolution text. These are from the journal article "In Situ Volumetric Imaging and Analysis of FRESH 3D Bioprinted Constructs Using Optical Coherence Tomography" published in
Cinque Terre Flooding | 25 Oct 2011 | WRF, Meso-NH, MOLOCH Ensemble Reforecasts Cinque Terre Flooding | 25 October 2011 Ensemble-based reforecasts using the WRF, Meso-NH and MOLOCH models Variables are described in the control (.ctl) files Starting dates: 2011/10/23 00 UTC, 2011/10/23 12 UTC, 2011/10/24 00 UTC, 2011/10/24 12 UTC Ending date: 2011/10/26 00 UTC
Ectopic expression of BBS1 rescues male infertility, but not retinal degeneration, in a BBS1 mouse model Bardet-Biedl syndrome (BBS) is a rare ciliopathy for which there are no current effective treatments. BBS is a genetically heterogeneous disease, though the M390R mutation in BBS1 is involved in approximately 25% of all genetic diagnoses of BBS. The principle features of BBS include retinal degeneration, obesity, male infertility, polydactyly, intellectual disability, and renal
Electrical and Electronic Components Dataset The "Electrical and Electronic Components Dataset" is a comprehensive collection of 3D mesh models representing various electrical and electronic components. The dataset is designed to serve multiple purposes, including but not limited to, machine learning, computer vision applications, and computational geometry research. It can be an invaluable resource for researchers and practitioners in the fields of electrical engineering, computer science, and
AMPERE Summary Plot Movies (2016-Oct) 2016-Oct AMPERE summary plot movies. See included zenodo_summary_plot_movie_description document for details. AMPERE ionosphere magnetosphere convection rst electrodynamics
English Longitudinal Study of Ageing: Waves 1-10, 2002-2023: Local Authority District Pre-2009 Boundaries: Secure Access

The English Longitudinal Study of Ageing (ELSA) study is a longitudinal survey of ageing and quality of life among older people that explores the dynamic relationships between health and functioning, social networks and participation, and economic position as people plan for, move into and progress beyond
English Longitudinal Study of Ageing: Waves 0-10, 1998-2023

The English Longitudinal Study of Ageing (ELSA) is a longitudinal survey of ageing and quality of life among older people that explores the dynamic relationships between health and functioning, social networks and participation, and economic position as people plan for, move into and progress beyond retirement. The main objectives of ELSA are to:

construct waves of accessible and
Corpus of Portuguese Historical and Metalinguistic Grammars (1536–1864) Description This dataset presents a Corpus of Portuguese Historical Metalinguistic Grammars (1536–1864), a machine-readable collection of six foundational normative works published between the 16th and 19th centuries. The corpus serves as a primary source for research in Diachronic Linguistics, specifically regarding the "Competition of Grammars" and the evolution of normative syntax in European and Brazilian
Root tissue segmentation dataset The PHDFM dataset is composed of fluorescence microscopy images of root tissue samples from A. thaliana , using the ratiometric fluorescent indicator 8‐hydroxypyrene‐1,3,6‐trisulfonic acid trisodium salt (HPTS). This semantic segmentation training dataset consists of 2D microscopy images (the brightfield channel for excitation at 405 nm), each containing a segmentation mask as an additional image channel (manually annotated by plant biologists). The
Data from: Epistatic interactions influence terrestrial-marine functional shifts in cetacean rhodopsin Like many aquatic vertebrates, whales have blue-shifting spectral tuning substitutions in the dim-light visual pigment, rhodopsin, that are thought to increase photosensitivity in underwater environments. We have discovered that known spectral tuning substitutions also have surprising epistatic effects on another function of rhodopsin, the kinetic rates associated with light-activated
Dataset for: Methodology for creation of labeled image datasets of entrained air voids and aggregates in concrete surfaces using confocal laser scanning microscopy Please click through the Versions in order to access publication specific datasets: Version v3: Data for "Combining Confocal Microscopy and Deep Learning for Concrete Microstructural Analysis" Description of the additional dataset Training and test data associated with the publication "Combining Confocal Microscopy and
SuperDARN Grid data in netCDF format (1997-Oct) 1997-Oct SuperDARN radar data in netCDF format. These files were produced using versions 3.0 of the public FitACF and make_grid algorithms, using the AACGM v2 coordinate system. Cite this dataset if using our data in a publication. The RST is available here: https://github.com/SuperDARN/rst The research enabled by SuperDARN is due to the efforts of teams of scientists and engineers working in many countries to build and operate radars, process
SuperDARN data in netCDF format (2021-Oct) 2021-Oct SuperDARN radar data in netCDF format. These files were produced using versions 2.5 and 3.0 of the public FitACF algorithm, using the AACGM v2 coordinate system. Cite this dataset if using our data in a publication. The RST is available here: https://github.com/SuperDARN/rst The research enabled by SuperDARN is due to the efforts of teams of scientists and engineers working in many countries to build and operate radars, process data and
SuperDARN Grid data in netCDF format (2011-Oct) 2011-Oct SuperDARN radar data in netCDF format. These files were produced using versions 3.0 of the public FitACF and make_grid algorithms, using the AACGM v2 coordinate system. Cite this dataset if using our data in a publication. The RST is available here: https://github.com/SuperDARN/rst The research enabled by SuperDARN is due to the efforts of teams of scientists and engineers working in many countries to build and operate radars, process
Continuation classes for a population model with harvesting. Case He-S1: Equal harvesting of juveniles and adults, survival rates of juveniles and adults add up to 1 This dataset contains selected results of rigorous numerical computations conducted in the framework of the research described in the paper "Global dynamics in a stage-structured discrete population model with harvesting" by E. Liz and P. Pilarczyk: Journal of Theoretical Biology, Vol. 297 (2012), pp. 148–165, doi:
What precision eye care typically involves Precision eye care refers to high-quality, detailed, and customized eye care services provided by optometrists and ophthalmologists. The focus is on ensuring accurate diagnosis, personalized treatment, and effective management of various eye conditions. Here’s an overview of what precision eye care typically involves: Comprehensive Eye Examinations Detailed Vision Testing: Assessing visual acuity to determine prescription needs for glasses or
Standardized Framework and Quantitative Benchmarking: Nuclear Segmentation platforms for Multiplexed Immunofluorescence data in Translational Studies Paired nuclear ground truth annotated binary masks and segmentation binary masks predicted from different segmentation platforms can be found in external.zip and inhouse.zip . internal.zip was used for development of the nuclear segmentation evaluation pipeline while external.zip hosts data that was/can be used for benchmarking of nuclear
Synchrotron radiation-based micro computed tomography dataset - in vivo mouse brain - CA019 - peri-mortem Contrast-enhanced imaging of peri-mortem morphological changes at CLS BMIT beamline This datasets features a synchrotron radiation-based micro computed tomography dataset of a C57BL/6J mouse injected with barium-based contrast agent into the lateral ventricle. Data was recorded at the beamline BMIT of the Canadian Light Source in November 2023. For more information, see the associated
George Harley gravestone, Haddington Gravestone within St Mary's Parish Church, Haddington, East Lothian, Scotland Inscribed: 'George Harley F.R.S. Professor of Medical Jurisprudence in University College London Born at Haddington 12th Feb 1825 Died on the 27th Oct 1896' https://en.wikipedia.org/wiki/George_Harley Source: Objaverse 1.0 / Sketchfab
Data from: Optogenetic dissection of descending behavioral control in Drosophila In most animals, the brain makes behavioral decisions that are transmitted by descending neurons to the nerve cord circuitry that produces behaviors. In insects, only a few descending neurons have been associated with specific behaviors. To explore how descending neurons control an insect's movements, we developed a novel method to systematically assay the behavioral effects of activating individual neurons on
GWAS Summary Statistics For Eye Imaging Traits This repository hosts GWAS summary statistics for eye imaging traits (OCT and fundus image traits) on the UK Biobank cohort. We have a website ( eyekp.org ) showing more details with respect to this repository.
Benthic organic matter biomass data for three intensively studied Wessex chalkstream sites, England, UK Ash-free dry mass (AFDM) of three distinct size fractions of organic matter (>1cm, >1mm and > 0.025mm) collected in quantitative samples of the benthic substrate determined from up to 10 replicate samples at three chalkstream sites in the Wessex chalk area (Nine Mile River, River Till and River Wylye) on each sampling occasion. Data were collected on seven occasions on the Wylye and Nine Mile
Supplementary Material for: Silicone granulomas in the orbit following breast implant rupture, case report Abstract Introduction A known but uncommon complication following breast augmentation with silicone implants is the rupture of these implants and subsequent silicone migration through the lymphatic system. Exceptionally, there are sporadic instances of silicone granulomas forming in distant, non-lymphatic sites, posing diagnostic and management challenges in clinical practice. Case
Data from: Transformation of stimulus correlations by the retina Redundancies and correlations in the responses of sensory neurons may seem to waste neural resources, but they can also carry cues about structured stimuli and may help the brain to correct for response errors. To investigate the effect of stimulus structure on redundancy in retina, we measured simultaneous responses from populations of retinal ganglion cells presented with natural and artificial stimuli that varied greatly in