fairdataihub/envision-eye-imaging-training-data huggingface dataset:
Clinical Outcomes of Observed and Treated Acute Posterior Multifocal Placoid Pigment Epitheliopathy and Relentless Placoid Chorioretinitis To assess the efficacy of treatment on acute posterior multifocal placoid pigment epitheliopathy (APMPPE) and relentless placoid chorioretinopathy (RPC). Cases were identified from three UK uveitis centers. Retrospective analysis of visual acuity recovery; OCT structural outcomes; and retinal lesion quantification in observed and treated cases of APMPPE/RPC.
SuperDARN data in netCDF format (2008-Oct) 2008-Oct SuperDARN radar data in netCDF format. These files were produced using version 3.0 of the public FitACF algorithm, using the AACGM v2 coordinate system. Cite this dataset if using our data in a publication. The RST is available here: https://github.com/SuperDARN/rst The research enabled by SuperDARN is due to the efforts of teams of scientists and engineers working in many countries to build and operate radars, process data and provide
Changes in climatology, snow cover and ground temperatures at high alpine locations in Switzerland (Bender et al. 2020) This dataset includes all data and simulation files presented in the publication: Bender et al. 2020. Changes in climatology, snow cover and ground temperatures at high alpine locations, DOI: 10.3389/feart.2020.00100. This includes: * meteorological forcing, * climate change timeries and * simulation files together with * snow depth * ground temperature Please refer to
Insights from survival analyses during 12 years of anti-VEGF therapy for neovascular age-related macular degeneration Importance: While multiple imputation models for missing data and use of mixed effects models generally provide better outcome estimates than using only observed data or last observation carried forward in clinical trials, such approaches usually cannot be applied to visual outcomes from retrospective analyses of clinical practice settings, so-called real-world outcomes.
PRMI: A dataset of minirhizotron images for diverse plant root study Understanding a plant's root system architecture (RSA) is crucial for a variety of plant science problem domains including sustainability and climate adaptation. Minirhizotron (MR) technology is a widely-used approach for phenotyping RSA non-destructively by capturing root imagery over time. Precisely segmenting roots from the soil in MR imagery is a critical step in studying RSA features. In this paper, we introduce a
SuperDARN data in netCDF format (2010-Oct) 2010-Oct SuperDARN radar data in netCDF format. These files were produced using version 3.0 of the public FitACF algorithm, using the AACGM v2 coordinate system. Cite this dataset if using our data in a publication. The RST is available here: https://github.com/SuperDARN/rst The research enabled by SuperDARN is due to the efforts of teams of scientists and engineers working in many countries to build and operate radars, process data and provide
SuperDARN Grid data in netCDF format (1995-Oct) 1995-Oct SuperDARN radar data in netCDF format. These files were produced using versions 3.0 of the public FitACF and make_grid algorithms, using the AACGM v2 coordinate system. Cite this dataset if using our data in a publication. The RST is available here: https://github.com/SuperDARN/rst The research enabled by SuperDARN is due to the efforts of teams of scientists and engineers working in many countries to build and operate radars, process
Sleep EEG-fMRI Project Sleep EEG-fMRI Project Data overviewSleep is a fundamental physiological necessity for rejuvenating optimal brain function and maintaining metabolic health. Yet, its underlying mechanisms remain elusive in humans. Simultaneous EEG-fMRI combines both electrophysiology’s high temporal resolution and fMRI’s high spatial resolution, which together characterize spatiotemporal dynamics in brain function during sleep. Here, we present a comprehensive dataset of sleep EEG-fMRI
Input data for break point detection of Swiss snow depth time series Data set consists of monthly mean values for snow depth and days with snow on the ground intended for the use of break detection with ACMANT, Climatol and HOMER. List and coordinates of stations used as well as metadata and break detection results from all three methods is included. Columns Monthly means for each hydrological year: Nov, Dec, Jan, Feb, Mar, Apr with May to Oct set to zero BREAK DETECTION CLIMATE
Pleiotropic effects of trisomy and pharmacologic modulation on structural, functional, molecular, and genetic systems in a Down syndrome mouse model Down syndrome (DS) is characterized by skeletal and brain structural malformations, cognitive impairment, altered hippocampal metabolite concentration, and gene expression imbalance. These alterations were usually investigated separately, and the potential rescuing effects of green tea extracts enriched in epigallocatechin-3-gallate (GTE-EGCG)
Doodleverse/Segmentation Zoo/Seg2Map Res-UNet models for Chesapeake/7-class segmentation of RGB 512x512 high-res. images Doodleverse/Segmentation Zoo/Seg2Map Res-UNet models for Chesapeake/7-class segmentation of RGB 512x512 high-res. images These Residual-UNet model data are based on Chesapeake Land Cover images and associated labels. Models have been created using Segmentation Gym* using the following dataset**: https://lila.science/datasets/chesapeakelandcover Image size used by
Supplementary Material for: Primary Vitreoretinal Lymphomas: A Diagnostic Challenge. Report of two recent cases with retinal biopsies and molecular investigations in Halifax, Nova Scotia. Introduction Primary vitreoretinal lymphomas (PVRL) are a type of central nervous system lymphoma that arise in the retina, vitreous, or optic nerve without initial brain involvement. The clinical diagnosis can be a challenge since the disease mimics uveoretinitis in its presentation and initial treatment
Large Spots DeepMIB project, synthetic dataset for testing 2D semantic segmentation A complete DeepMIB project with a synthetic dataset generated for quick tests of semantic segmentation approaches. The dataset includes a trained DeepLabV3-Resnet18 network for detection of large spots on a black background. The network can be opened by loading "2D_LargeSpots_2cl_DeepLabV3.mibCfg" file by MIB->Menu->Tools->Deep learning segmentation->Options tab->Config files->Load Drag and drop of the
rwave-1024 - Retinal Wave Dataset 1024 classes of retinal waves, 1000 images per class.	info.txt: Information regarding file structure and parameters.	rwave-1024.tar.gz: images in class folders Generated using Retinal Wave Simulator https://github.com/BennyCa/Retinal-Wave-Simulator adapted from https://swindale.ecc.ubc.ca/home-page/software/retinal-wave-models/ Used in project Retinal Waves for Pre-Training Artificial Neural Networks Mimicking Real Prenatal Development:
Visual field changes in patients receiving antitubercular therapy Objective Tuberculosis is a global health challenge with one-third of the world's population infected by it. Although ocular side effects of Anti-tubercular drugs are well known, the patients generally report late in the course which can result in irreversible vision loss. The purpose of this study was to study the visual field changes during the time course of anti-tubercular therapy(ATT). Methods A total of 48 patients were
CHU Sétif 500 Lits – Complete Architectural Dataset (Plans, Maps, Statistics, WHO Guidelines) This dataset contains all architectural, programmatic, and contextual materials required to generate a complete "Plan de masse" and master plan for the new CHU Sétif (500 beds), located in the western expansion zone of Sétif (El Bez plateau). All files were uploaded together in this Zenodo record, including: - AutoCAD drawings (site plans, topography, boundaries)- PDF documents with hospital units,
SuperDARN data in netCDF format (2013-Oct) 2013-Oct SuperDARN radar data in netCDF format. These files were produced using versions 2.5 and 3.0 of the public FitACF algorithm, using the AACGM v2 coordinate system. Cite this dataset if using our data in a publication. The RST is available here: https://github.com/SuperDARN/rst The research enabled by SuperDARN is due to the efforts of teams of scientists and engineers working in many countries to build and operate radars, process data and
Chiesa di Santa Trinita, Florence from Wikipedia: a Roman Catholic church located in front of the piazza of the same name, traversed by Via de' Tornabuoni, in central Florence, region of Tuscany, Italy. It is the mother church of the Vallumbrosan Order of Monks, founded in 1092 by a Florentine nobleman. South on Via de' Tornabuoni is the Ponte Santa Trinita over the river Arno; across the street is the Palazzo Spini Feroni.
PEARL DEFICIENCY IN THE EYE: ETIOLOGY, CLINICAL FEATURES, DIAGNOSIS, AND MANAGEMENT Pearl deficiency in the eye, commonly associated with ocular surface disorders and lens abnormalities, represents a significant clinical concern in ophthalmology. This condition, characterized by the insufficient formation or deposition of crystalline or calcified materials in ocular structures, can lead to visual impairment, lens opacity, and compromised ocular function. The etiology of pearl deficiency is
IS Seismic Data IS Seismic data used to detect Hamas's pre-attack motions on Oct. 7. Results published in the following paper: Asaf Inbal; Forensic Seismic Evidence for Precursory Mobilization in Gaza Leading to the October 7 Hamas Attack. The Seismic Record 2024;; 4 (4): 288–298. doi Dataset contents: Compressed tar.gz files contain data from the IS seismic network in mini-seed format resp.pyc: Python obspy inventory with instrument response in pickle format
Barriers and motivators to pediatrics contact lens fitting SourceThe dataset comprises responses from 148 licensed eye-care practitioners across 38 optometry and ophthalmology clinics in Kenya. It originates from a structured, validated questionnaire capturing practitioner demographics, clinical experience, practice setting, prescribing behavior, and perceptions regarding pediatric contact-lens use for myopia management. Quantitative variables include years in practice,
AMPERE Summary Plot Movies (2010-Oct) 2010-Oct AMPERE summary plot movies. See included zenodo_summary_plot_movie_description document for details. AMPERE ionosphere magnetosphere convection rst electrodynamics
2D bright field Fission yeast cell images with ground truth annotations Original images are from http://www-bcf.usc.edu/~forsburg/pombeX.html. This software is associated with the publication "PombeX: robust cell segmentation for fission yeast transillumination images", PLoS One 2013. (doi: 10.1371/journal.pone.0081434) Here, we provide the ground truth labels of: cell centers and segmentation, which are used in the publications:	"Learning to Segment: Training Hierarchical Segmentation
Supplementary Material for: Case Report of Seronegative Cancer Associated Retinopathy in a Patient with Small Cell Lung Carcinoma Cancer associated retinopathy (CAR) is a rare paraneoplastic syndrome characterized by autoimmune destruction of photoreceptor cells. It is associated with several tumor types, including small cell lung carcinoma (SCLC). Corticosteroids have been the mainstay treatment for CAR, although no therapeutic standard has truly been established. A 66-year-old female with
Morphological traits of spiders (Araneae) and ants (Formicidae) collected from Northern Ghanaian mango orchards and forest savanna This dataset contains the values of morphological traits measured from mature spiders and ants collected in northern Ghana October/November 2022. The six measured morphological traits for spiders are Total body length (mm), Prosoma length (mm), Prosoma width (mm), Prosoma height (mm), Tibia I length (mm) and Fang length (mm) and the four measured morphological
Experience of applying cosmetic Etafilcon A contact lens in cases with microcornea ABSTRACT Purpose: Microcornea is a rare condition that frequently resulets in serious cosmetic concerns due to the resultant asymmetrical appearance of the eye, and its cosmetic rehabilitation is possible with the use of colored contact lenses. This paper aims to present our experiences with the use of cosmetic Etafilcon A contact lenses for microcornea. Methods: Eight patients with unilateral microcornea without
Data for "Bayesian inference for biophysical neuron models enables stimulus optimization for retinal neuroprosthetics" Experimental and precomputed data for the paper "Bayesian inference for biophysical neuron models enables stimulus optimization for retinal neuroprosthetics" by Oesterle et al. 2020 (DOI: 10.7554/eLife.54997 ). The cone bipolar cell data has been described and published in the paper "Inhibition decorrelates visual feature representations in the inner retina" by Franke et
Test DICOM image data for use with mHUB model CT_Lung_SMIT GTV Segmentation (MSKCC) DICOM image data for testing and output validation of the mHUB model CT_Lung_SMIT GTV Segmentation (shared by MSKCC Medical Physics Dept, authored by Veeraraghavan and Jiang)
Data from: Expression of matrix Metalloproteinases-2 and aquaporin-1 in corneoscleral junction after angle-closure in rabbits Background: To investigate the expression of Matrix Metalloproteinases 2 and aquaporin-1 in corneoscleral junction and explore the mechanism of trabecular damageafter angle-closure. Methods: Thirty New Zealand white rabbits were randomly assigned into 2 groups, theexperimental group (Group 1) including twenty five rabbits and the control group (Group 2) including 5
English Longitudinal Study of Ageing: Waves 6-10, 2012-2023: Census 2011 Rural-Urban Indicators (Recoded): Special Licence Access

The English Longitudinal Study of Ageing (ELSA) study is a longitudinal survey of ageing and quality of life among older people that explores the dynamic relationships between health and functioning, social networks and participation, and economic position as people plan for, move into and progress beyond retirement. The main
Functional networks in the infant brain during sleep and wake states Functional brain networks are assessed differently earlier vs. later in development: infants are almost universally scanned asleep, whereas adults are typically scanned awake. Observed differences between infant and adult functional networks may thus reflect differing states of consciousness rather than or in addition to developmental changes. We explore this question by comparing functional networks in fMRI scans of
Data from: Exploring the visual world of fossilized and modern fungus gnat eyes (Diptera: Keroplatidae) with X-ray microtomography Animal eyes typically possess specialised regions for guiding different behavioural tasks within their specific visual habitat. These specializations, and evolutionary changes to them, can be crucial for understanding an animal’s ecology. Here, we explore how the visual systems of some of the smallest flying insects, fungus gnats, have adapted to different
Multi modal optical coherence tomography flowmetry of organ on chip devices This repository contains raw data and analysis routines of the publication “Multi modal optical coherence tomography flowmetry of organ on chip devices” in Scientific Reports (doi.org/10.1038/s41598-025-10089-9) . The reader is free to use the scripts and data in this depository if the manuscript is correctly cited in their work. For further questions, feel free to contact the corresponding author. Python 3.11 was
Data from: Differential neuroanatomical, neurochemical, and behavioral impacts of early-age isolation in a Eusocial insect Social experience early in life appears to be necessary for the development of species-typical behavior. Although isolation during critical periods of maturation has been shown to impact behavior through gene expression and brain development in invertebrates and vertebrates, workers of some ant species appear resilient to social deprivation and other neurobiological
Single-cell analysis reveals M. tuberculosis ESX-1-mediated accumulation of anti-inflammatory macrophages in infected mouse lungs Mycobacterium tuberculosis (MTB) ESX-1, a type VII secretion system, is a key virulence determinant contributing to MTB’s survival within lung mononuclear phagocytes (MNPs), but its effect on MNP recruitment and differentiation remains unknown. Here, using multiple single-cell RNA sequencing techniques, we studied the role of ESX-1 in MNP heterogeneity and
Continuation classes for a population model with harvesting. Case Hj-Se: Harvesting juveniles only, equal survival rates of juveniles and adults This dataset contains selected results of rigorous numerical computations conducted in the framework of the research described in the paper "Global dynamics in a stage-structured discrete population model with harvesting" by E. Liz and P. Pilarczyk: Journal of Theoretical Biology, Vol. 297 (2012), pp. 148–165, doi: 10.1016/j.jtbi.2011.12.012. The
Seg-CQ500 Intracranial hemorrhages segmentation labels for 51 CT-scans from the CQ500 dataset (http://headctstudy.qure.ai/dataset). Two trained radiologists from the Karolinska Instituted in Stockholm, labeled 51 scans to provide 3D mask of intracranial hemorrhages. We hope our new labels will promote the comparability of hemorrhage segmentation algorithm in the future and help push the field forward. If you use those labels, please cite our paper in Frontiers in Neuroimaging: ```
Emergence of a geometric pattern of cell fates from tissue-scale mechanics in the Drosophila eye Pattern formation of biological structures involves the arrangement of different types of cells in an ordered spatial configuration. In this study, we investigate the mechanism of patterning the Drosophila eye into a precise triangular grid of photoreceptor clusters called ommatidia. Previous studies had led to a long-standing biochemical model whereby a reaction-diffusion process is templated by
Analysis of genetic and environmental risk factors and their interactions in Korean patients with age-related macular degeneration Purpose: To investigate the association of genetic and environmental factors, and their interactions in Korean patients with exudative age-related macular degeneration (AMD). Methods: A total of 314 robustly characterized exudative AMD patients, including 111 PCV (polypoidal choroidal vasculopathy) and 154 typical choroidal neovascularization (CNV), and 395 control
Infrequent strong connections constrain connectomic predictions of neuronal function (1/3) How does circuit wiring constrain neural computation? Recent work has leveraged connectomic datasets to predict the functions of cells and circuits in the brains of multiple species. However, many of these hypotheses have not been compared with physiological measurements, obscuring the limits of connectome-based functional predictions. To explore these limits, we characterized the visual responses of
Fast Calorimeter Simulation Challenge 2022 - Submissions Dataset 1 Photons These are all the submitted samples to dataset 1 (photons) of the “Fast Calorimeter Simulation Challenge 2022”. They each consist of 121,000 calorimeter showers of photons with energies ranging from 256 MeV to 4.2 TeV. The training data (based on Geant4) can be found at https://doi.org/10.5281/zenodo.8099322 the paper describing the results is available on arXiv:2410.21611 , and further details, in particular
Data from -- Automated Thoracolumbar Stump Rib Detection and Analysis in a Large CT Cohort This Upload contains the segmentations used in the paper titled " Automated Thoracolumbar Stump Rib Detection and Analysis in a Large CT Cohort ". Rib segmentation masks for: Public VerSe Dataset Public RibFrac Dataset It contains the predictions of our segmentation model as well as manually corrected samples that were used for training/testing. The segmentation masks are binary and
Grid-to-Grid model estimates of river flow for Great Britain driven by UK Climate Projections 2018 (UKCP18) Regional (12km) data (1980 to 2080) Gridded hydrological model river flow estimates on a 1km grid over Great Britain for the period Dec 1980 - Nov 2080. The dataset includes monthly mean river flow, annual maxima of daily mean river flow (water years Oct - Sept), along with the date of occurrence, and annual minima of 7-day mean river flow (years spanning Dec-Nov), along with the date of
Doodleverse/Segmentation Zoo/Seg2Map Res-UNet models for CoastTrain water/other segmentation of RGB 768x768 orthomosaic images Doodleverse/Segmentation Zoo/Seg2Map Res-UNet models for CoastTrain water/other segmentation of RGB 768x768 orthomosaic images These Residual-UNet model data are based on Coast Train images and associated labels. https://coasttrain.github.io/CoastTrain/docs/Version%201:%20March%202022/data Models have been created using Segmentation Gym* using the following
Hard Layer This dataset comes from the first phase of MAIL methodology as described in D2.3. Here a top-down stepwise approach is followed, in which areas that are not Marginal Lands (MLs) are incrementally removed, based on thresholds of various marginality criteria and indicators. These results are an intermediate layer, named “ML HARD” including all potential MLs after the exclusion of all LULC types that are not fulfilling the definition of MLs. Marginal Lands
Facial thread lifting with suture suspension Abstract Introduction: The increased interest in minimally-invasive treatments, such as the thread lifting, with lower risk of complications, minimum length of time away from work and effectiveness in correcting ptosis and aging characteristics has led many specialists to adopt this technique, but many doubts about its safety and effectiveness still limit its overall use. Objective: To analyze data published in the literature on the durability of
Doodleverse/Segmentation Zoo Res-UNet models for 2-class (water, other) segmentation of Sentinel-2 and Landsat-7/8 3-band (RGB) images of coasts. Doodleverse/Segmentation Zoo Res-UNet models for 2-class (water, other) segmentation of Sentinel-2 and Landsat-7/8 3-band (RGB) images of coasts. These Residual-UNet model data are based on RGB (red, green, and blue) images of coasts and associated labels. Models have been created using Segmentation Gym* using the following dataset**: