msmbuilder (conda): MSMBuilder is an application and python library. It builds statistical models for high-dimensional time-series. The particular focus of the package is on the analysis of atomistic simulations of biomolecular dynamics such as protein folding and conformational change.
Keywords: analysis|clustering|dimensionality-reduction|feature-extraction|hmm|markov-model|molecular-dynamics|msmbuilder|pca|python|tica