pymcadre (pypi): The pymCADRE tool is an advanced re-implementation of the metabolic Context-specificity Assessed by Deterministic Reaction Evaluation (mCADRE) algorithm in Python. It constructs tissue-specific metabolic models by leveraging gene expression data and literature-based evidence, along with network topology information.
Keywords: pymCADRE|systems biology|tissue-specific metabolic models|constraint-based-modeling|flux-balance-analysis|genome-scale-modeling|host-virus-model|metabolic-network-reconstruction|python|sbml-model|systems-biology-simulation|tissue-specific-models