sistr-cmd (pypi): Serovar predictions from Salmonella whole-genome sequence assemblies by determination of antigen geneand cgMLST gene alleles using BLAST. Mash MinHash can also be used for serovar prediction.
Keywords: Salmonella|serotyping|genotyping|cgMLST|BLAST|Mash|MinHash|bioinformatics|cgmlst|salmonella|sistr