TITLE: Examples of protocols on protocols.io from different disciplines
AUTHORS: protocols.io team

[DESCRIPTION]
We warmly welcome all research methods. While the origin of the platform was more biology/wetlab, we expanded to support all fields when we partnered with PLOS ONE in 2017.

There is now a diverse spectrum of research methods that are shared on protocols.io, including molecular biology, computational, human, medical, psychology, geosciences, political science, and other. We also have many guidelines, best practices, and teaching documents on protocols.io - all of these are appropriate.

Below you will find some examples from different disciplines. Please note that this is just a subset from over 12,000 public protocols on the platform.

[STEPS]
SECTION: Molecular Biology
1. www.protocols.io/view/micropatterning-em-grids-for-cryo-electron-tomogra-bz22p8ge
www.protocols.io/view/engineering-brain-assembloids-to-interrogate-human-bznap5ae
www.protocols.io/view/high-quality-dna-from-fungi-for-long-read-sequenci-j8nlkky6l5r7/v11
www.protocols.io/view/mcscrb-seq-protocol-p9kdr4w
www.protocols.io/view/monkeypox-virus-multiplexed-pcr-amplicon-sequencin-5qpvob1nbl4o/v2
www.protocols.io/view/human-liver-caudate-lobe-dissociation-for-scrna-se-q26g77j1gwz1/v2

SECTION: Medical/trials
2. www.protocols.io/view/meld-protocol-1-patient-and-control-inclusion-in-t-ne2dbge
www.protocols.io/view/acceleration-of-small-bowel-motility-after-oral-ad-k4gcytw
www.protocols.io/view/does-perineural-clonidine-prolong-the-duration-of-hsnb6de
www.protocols.io/view/repeat-multiparametric-mri-in-prostate-cancer-pati-j5jcq4n
www.protocols.io/view/digitally-enhanced-recovery-investigating-the-use-jhacj2e
SECTION: Device/instrumentation/experiment setup
9. www.protocols.io/view/assembly-instructions-for-colosseum-261ge422dv47/v2
www.protocols.io/view/functional-calibration-for-trunk-and-lower-limb-fi-itrcem6
www.protocols.io/view/method-for-bench-testing-speculum-and-or-speculum-hrhb536
https://www.protocols.io/view/optoplate-calibration-protocol-bivmke46 (optogenetics)
https://www.protocols.io/view/light-dark-preference-test-for-adult-zebrafish-dan-srfed3n (with diagrams and video; also behavior)
https://www.protocols.io/view/headbar-implantation-bcrsiv6e 
https://www.protocols.io/view/assembling-led-controller-electronics-bdiai4ae (very detailed diagrams; part of this collection)
https://www.protocols.io/view/radius-of-curvature-measurements-to-determine-best-9nmh5c6
https://www.protocols.io/view/eit-data-aquisition-in-rat-sciatic-nerve-using-sti-ww7ffhn (rat nerve imaging)
https://www.protocols.io/view/building-up-chemostats-for-experimental-eco-evolut-tkxekxn
https://www.protocols.io/view/high-throughput-pipette-tip-hydroponics-for-collec-bazeif3e
https://www.protocols.io/view/intravenous-jugular-catheterization-for-rats-bhzij74e
https://www.protocols.io/view/marchantia-high-throughput-imaging-in-multiwell-pl-bcmsiu6e
https://www.protocols.io/view/3-pre-imaging-setup-for-high-resolution-afm-in-flu-bncnmave
https://www.protocols.io/view/spatial-metabolomics-of-in-situ-host-microbe-inter-6jchciw
https://www.protocols.io/view/flavonoid-profiling-by-liquid-chromatography-coupl-zggf3tw
https://www.protocols.io/view/arms-partb-assembly-p69drh6
https://www.protocols.io/view/laboratory-calibration-of-soil-moisture-sensors-in-swnefde
https://www.protocols.io/view/simultaneous-sentek-and-ml3-calibration-jm5ck86
https://www.protocols.io/view/optogenetically-stimulating-enteric-neurons-in-the-bgr9jv96 (optogenetics)
SECTION: Archeology
3. https://www.protocols.io/view/stone-tools-illustrations-with-vector-art-the-39-s-4r3l248j3g1y/v2
https://www.protocols.io/view/styrostone-a-protocol-for-scanning-and-extracting-4r3l24d9qg1y/v2
https://www.protocols.io/view/small-object-and-artefact-photography-39-soap-39-p-5jyl85kxdl2w/v3
https://www.protocols.io/view/high-resolution-34-diy-34-photogrammetry-39-hrp-39-q26g787n1lwz/v2?step=38
https://www.protocols.io/view/an-archaeological-experiment-focused-on-the-intuit-be7fjhjn
https://www.protocols.io/view/tracing-long-term-demographic-changes-the-issue-of-vpve5n6/abstract
https://www.protocols.io/view/dental-calculus-field-sampling-protocol-sabin-vers-7vrhn56
SECTION: Ecology
5. https://www.protocols.io/view/field-survey-of-the-population-dynamics-of-common-mmyc47w
https://www.protocols.io/view/Estimation-of-viral-induced-phytoplankton-mortalit-dpf5jm
https://www.protocols.io/view/Fingerprinting-aquatic-virus-communities-using-pul-dy27yd
https://www.protocols.io/view/Modeling-ecological-drivers-in-marine-viral-commun-efgbbjw
SECTION: Psychology
6. https://www.protocols.io/view/experimental-procedure-of-household-activities-and-jatcien
https://www.protocols.io/view/personality-assessment-protocol-m68c9hw
https://www.protocols.io/view/acceptance-of-different-design-exergames-in-elders-n92ldnzov5br/v3
https://www.protocols.io/view/conducting-online-research-with-infants-x54v9j6emg3e/v1
SECTION: Animal behavior
7. https://www.protocols.io/view/active-avoidance-protocol-01282020-bbu6inze
https://www.protocols.io/view/insulin-tolerance-test-in-mouse-wxjffkn
https://www.protocols.io/view/pelvic-nerve-implantation-testing-and-processing-i-bgrmjv46 (collection)
https://www.protocols.io/view/elevated-plus-maze-bh3ej8je
https://www.protocols.io/view/open-field-test-bigfkbtn
https://www.protocols.io/view/hot-water-tail-immersion-test-bhxbj7in
https://www.protocols.io/view/octopus-social-tolerance-experiment-w9nfh5e
https://www.protocols.io/view/Preparing-flies-for-Buridan-s-Paradigm-c7vzn5
SECTION: Genomic/sequencing
8. https://www.protocols.io/view/mcscrb-seq-protocol-p9kdr4w
https://www.protocols.io/view/viral-to-metazoan-marine-plankton-nucleotide-seque-qv6dw9e (TARA Oceans collection)
https://www.protocols.io/view/select-load-annotate-normalize-and-process-toxicog-s24eggw
https://www.protocols.io/view/the-pipeline-of-assembly-and-annotation-hrpb55n (part of a collection)
https://www.protocols.io/view/sars-cov-2-genomic-variation-african-perspective-bmpfk5jn
https://www.protocols.io/view/de-novo-transcriptome-assembly-workflow-ghebt3e
SECTION: Computational/software/data-related workflows
4. https://www.protocols.io/view/assembly-procedure-applied-to-tara-oceans-data-ex-hfqb3mw
https://www.protocols.io/view/processing-single-cell-calling-card-sequencing-dat-4phgvj6
https://www.protocols.io/view/protocol-for-a-reproducible-circrna-analysis-using-9vmh646
https://www.protocols.io/view/mathematical-models-for-understanding-the-genetic-bmbvk2n6
https://www.protocols.io/view/creating-tensor-maps-8jyhupw
https://www.protocols.io/view/phenotyping-3d-coral-models-in-meshlab-bgbpjsmn
https://www.protocols.io/view/assessing-sequence-quality-in-galaxytrakr-bdvfi63n (part of FDA’s GenomeTrakr group)
https://www.protocols.io/view/gas-chromatochraphic-detection-of-sesquiterpenoids-kj2cuqe
https://www.protocols.io/view/molecular-docking-an-easy-protocol-m2dc8a6
https://www.protocols.io/view/applying-vcontact-to-viral-sequences-and-visualizi-x5xfq7n
SECTION: Reviews and meta-analysis
10. https://www.protocols.io/view/the-anxiolytic-effect-of-probiotics-a-systematic-r-nsadeae
https://www.protocols.io/view/systematic-review-and-meta-analysis-of-mendelian-r-bpeemjbe
https://www.protocols.io/view/exploration-of-rehabilitation-through-the-use-of-v-rm7vz3jprgx1/v1
https://www.protocols.io/view/consistency-in-identity-related-sequential-decisio-3byl4kp9jvo5/v2
SECTION: Chemistry
11. https://www.protocols.io/view/consistency-in-identity-related-sequential-decisio-3byl4kp9jvo5/v2
https://www.protocols.io/view/bubble-strip-aqueous-gas-sampling-dm6gp8mdjlzp/v4
https://www.protocols.io/view/ligand-docking-using-patchdock-for-biochemistry-i-eq2ly393qgx9/v1
https://www.protocols.io/view/standard-operating-procedure-sop-for-the-analysis-6qpvre78olmk/v1
https://www.protocols.io/view/synthesis-of-fluorinated-neonicotinoids-81wgbp61yvpk/v1
https://www.protocols.io/view/bisabolol-gc-sample-preparation-5qpvonpk7l4o/v1