iGEM 2013 — Team BYU_Provo

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# Team:BYU Provo/Notebook

### From 2013.igem.org

* [Home](https://2013.igem.org/Team%3ABYU_Provo)
* [Team](https://2013.igem.org/Team%3ABYU_Provo/Team)
  + [Overview](https://2013.igem.org/Team%3ABYU_Provo/Team)
  + [Official Team Profile](https://igem.org/Team.cgi?id=1195)
  + [Team Video](https://2013.igem.org/Team%3ABYU_Provo/TeamMember#Team_Video)
  + [Undergraduates](https://2013.igem.org/Team%3ABYU_Provo/TeamMember#Team_Members)
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* [Project](https://2013.igem.org/Team%3ABYU_Provo/Project)
  + [Overview](https://2013.igem.org/Team%3ABYU_Provo/Project)
  + [Background](https://2013.igem.org/Team%3ABYU_Provo/Project/Background)
  + [Experimental Design](https://2013.igem.org/Team%3ABYU_Provo/Project/ExperimentalDesign)
* [Notebook](https://2013.igem.org/Team%3ABYU_Provo/Notebook)
  + [Overview](https://2013.igem.org/Team%3ABYU_Provo/Notebook)
  + [Phage Team](https://2013.igem.org/Team%3ABYU_Provo/Notebook#Phage_Team)
  + [Cholera Team](https://2013.igem.org/Team%3ABYU_Provo/Notebook#Cholera_Team)
* [Results](https://2013.igem.org/Team%3ABYU_Provo/Results)
  + [Overview](https://2013.igem.org/Team%3ABYU_Provo/Results)
  + [Judging Criteria](https://2013.igem.org/Team%3ABYU_Provo/Results/Judge)
  + [Experimental](https://2013.igem.org/Team%3ABYU_Provo/Results/Experimental)
  + [Modeling](https://2013.igem.org/Team%3ABYU_Provo/Results/Modeling)
  + [Parts Submitted to the Registry](https://2013.igem.org/Team%3ABYU_Provo/Parts)
  + [A Taste of Toronto](https://2013.igem.org/Team%3ABYU_Provo/Toronto)
* [Human Practices](https://2013.igem.org/Team%3ABYU_Provo/Outreach)
  + [Overview](https://2013.igem.org/Team%3ABYU_Provo/Outreach)
  + [Orem Public Library Visit](https://2013.igem.org/Team%3ABYU_Provo/Outreach/OremLibrary)
  + [The Adventure of Baxter Bacteria](https://2013.igem.org/Team%3ABYU_Provo/Outreach/Baxtor)
* [Safety](https://2013.igem.org/Team%3ABYU_Provo/Safety)
* [Attributions & Collaborations](https://2013.igem.org/Team%3ABYU_Provo/Attribution)
  + [Attributions & Acknowledgements](https://2013.igem.org/Team%3ABYU_Provo/Attribution)
  + [Collaborations](https://2013.igem.org/Team%3ABYU_Provo/Collaboration)
* [iGEM 2013](https://2013.igem.org/Main_Page)

![BYUNotebook.JPG](/wiki/images/a/aa/BYUNotebook.JPG)

## **Phage Team**

|  |  |  |
| --- | --- | --- |
| ![BYULPProjectPic.JPG](/wiki/images/e/e6/BYULPProjectPic.JPG) | **Large Phage Team**    **Bryan Merrill and Keltzie Westra**  The focus of the Large Phage Team is to make a cross section of phage sizes through the mutagenesis of T4 bacteriophage. Our main area of research is in making T4's already large capsid even larger, while maintaining phenotypic stability. This was done by taking the isolated large phage and observing there later generations to ensure that their phenotype is inherited. | [March-April](/Team%3ABYU_Provo/Notebook/LargePhage/Winterexp "Team:BYU Provo/Notebook/LargePhage/Winterexp")  [May-June](/Team%3ABYU_Provo/Notebook/LargePhage/Springexp "Team:BYU Provo/Notebook/LargePhage/Springexp")  [July-August](/Team%3ABYU_Provo/Notebook/LargePhage/Summerexp "Team:BYU Provo/Notebook/LargePhage/Summerexp")  [September-October](/Team%3ABYU_Provo/Notebook/LargePhage/Fallexp "Team:BYU Provo/Notebook/LargePhage/Fallexp") |
| ![S4.JPG](/wiki/images/2/2e/S4.JPG) | **Small Phage Team**    **Xiuqi (Jade) Li and LJ Perry**  We are creating a library of different size T7 bacteriophage capsids. This is accomplished by mutating the phage with a base analog and then isolating the smaller and bigger T7 phages. We are also establishing the relationship between the capsid size and the plaque size of certain phages. | [March-April](/Team%3ABYU_Provo/Notebook/SmallPhage/Winterexp "Team:BYU Provo/Notebook/SmallPhage/Winterexp")  [May-June](/Team%3ABYU_Provo/Notebook/SmallPhage/Springexp "Team:BYU Provo/Notebook/SmallPhage/Springexp")  [July-August](/Team%3ABYU_Provo/Notebook/SmallPhage/Summerexp "Team:BYU Provo/Notebook/SmallPhage/Summerexp")  [September-October](/Team%3ABYU_Provo/Notebook/SmallPhage/Fallexp "Team:BYU Provo/Notebook/SmallPhage/Fallexp") |
| ![Cesiumchloridegradient.jpg](/wiki/images/c/c8/Cesiumchloridegradient.jpg) | **Phage Purification Team**    **Amber Brown, Arick Christopher, and Darren Lasko**  As members of the Phage Purification Team, we focus on the purification of bacteriophages and the preparation of ghost capsids. We have worked with several different methods of preparation and can manipulate the procedures to accommodate the type of phage and the capsid size of the mutants. | [March-April](/Team%3ABYU_Provo/Notebook/Phage_Purification/Winterexp "Team:BYU Provo/Notebook/Phage Purification/Winterexp")  [May-June](/Team%3ABYU_Provo/Notebook/Phage_Purification/Springexp "Team:BYU Provo/Notebook/Phage Purification/Springexp")  [July-August](/Team%3ABYU_Provo/Notebook/Phage_Purification/Summerexp "Team:BYU Provo/Notebook/Phage Purification/Summerexp")  [September-October](/Team%3ABYU_Provo/Notebook/Phage_Purification/Fallexp "Team:BYU Provo/Notebook/Phage Purification/Fallexp") |

## **Cholera Team**

|  |  |  |
| --- | --- | --- |
| ![BYUCCCC.jpg](/wiki/images/9/9c/BYUCCCC.jpg) | **Cholera-Detection Team**    **Clarice Harrison, Kendall Kiser, and Kelton Peck**  Our focus is two-fold: 1) develop a system in *E.coli* to detect the presence *V. cholerae*, and 2) integrate *E.coli* bacteriophage lambda into a biofilm-degrading machine that is moderated by our detection system. Upon discovering experimentally that bacteriophage lambda can naturally sense cholera, our research efforts have centered on synthetically improving this pathway. | [March-April](/Team%3ABYU_Provo/Notebook/Cholera_-_Detection/Winterexp "Team:BYU Provo/Notebook/Cholera - Detection/Winterexp")  [May-June](/Team%3ABYU_Provo/Notebook/Cholera_-_Detection/Springexp "Team:BYU Provo/Notebook/Cholera - Detection/Springexp")  [July-August](/Team%3ABYU_Provo/Notebook/Cholera_-_Detection/Summerexp "Team:BYU Provo/Notebook/Cholera - Detection/Summerexp")  [September-October](/Team%3ABYU_Provo/Notebook/Cholera_-_Detection/Fallexp "Team:BYU Provo/Notebook/Cholera - Detection/Fallexp") |
| ![BYU2013-CholeraGroup1.jpg](/wiki/images/f/fe/BYU2013-CholeraGroup1.jpg) | **Cholera-Enzyme Team**    **Nathan Sabin and Michael Schellhous**  On the Cholera-Enzyme team our focus is researching enzymes that will degrade the *V. cholerae* biofilm. Our goal is to find enzymes that have potential to degrade the biofilm, isolate them, clone them into *E. coli*, and design an assay to test their biofilm-degrading ability. | [March-April](/Team%3ABYU_Provo/Notebook/Cholera_-_Enzymes/March-April "Team:BYU Provo/Notebook/Cholera - Enzymes/March-April")  [May-June](/Team%3ABYU_Provo/Notebook/Cholera_-_Enzymes/May-June "Team:BYU Provo/Notebook/Cholera - Enzymes/May-June")  [July-August](/Team%3ABYU_Provo/Notebook/Cholera_-_Enzymes/July-August "Team:BYU Provo/Notebook/Cholera - Enzymes/July-August")  [September-October](/Team%3ABYU_Provo/Notebook/Cholera_-_Enzymes/September-October "Team:BYU Provo/Notebook/Cholera - Enzymes/September-October") |

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