iGEM 2012 — Team CBNU-Korea

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# Team:CBNU-Korea/Notebook

### From 2012.igem.org

2012 iGEM

CBNU-Korea

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## NOTEBOOK

### - Notebook

+ MENU

* 01 + NoteBook
* - March, April
* [- May, June](https://2012.igem.org/Team%3ACBNU-Korea/Notebook/2)
* [- July](https://2012.igem.org/Team%3ACBNU-Korea/Notebook/3)
* [- August](https://2012.igem.org/Team%3ACBNU-Korea/Notebook/4)
* [- September](https://2012.igem.org/Team%3ACBNU-Korea/Notebook/5)

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# March - April

## March. 26th – April. 1th

**Tuesday**

■CBNU-KOREA team is organized
 ■Had first meeting
■Introduced about iGem & previous project of CBNU-KOREA

**Thursday**

■Planned plan of near future
 ■(Start -> Find similar gene
comparing sequence by BLAST in 15 species(DEG) -> Certify between
ssential genes and result of BLAST -> Certify if it is equal or
over than 80% -> If it is, adjust to 1500 species.)
■Department of Computer engineering : Planned to study for the
possibilities of the automation of BLAST.
 ■Department of
Statistics: Planned to calculate probability to be match between
BLAST results and experimently presumed essential genes.
■Department of Microbiology: Planned to study for the database of
NCBI(Variable of NC file).

**Friday**

■Re-defined the name of the project of this year(BIDOB)
■Planned to presume essential brick using NCBI data.

## Apr. 2nd – Apr. 8th

**Tuesday**

■Parsed a data of 15 species in NCBI and built DB for a first
time.
 ■Made a result of analysis and built it to DB.
■Planned to study to have a understandable reliability(%) on our
analysis.

**Thursday**

Build DB of NCBI information.

**Friday**

■Presumption of Essential Gene : Grouped more than two species and
analyzed characteristic of each genome. Studied a EGGS Site.
■Analysis of location, direction and array of essential gene :
Studied for organization analysis of statistic-biology. Studied
some of research paper.
 ■Implementing viewer : Planned to
study for JAVA computer language.

**Saturday**

■Presumption of Essential Gene : Find species-EG by analyzing in
each species.
 ■Presumption of Essential Gene : Find
Essential gene by analyzing result between species.
■Presumption of Essential Function : Analyze function of each
essential genes.
 ■Analyzing the array of genes : Analyze
location and array of essential genes and every genes.
■Implement Viewer by built DB.

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