title: Phytoplankton nutrient limitation in Lake Rotorua

authors: Tempero, Grant Wayne

abstract: Lake Rotorua is one of 12 lakes jointly managed by the Rotorua Lakes Council, Te Arawa Lakes Trust and the Bay of Plenty Regional Council under the Rotorua Te Arawa Lakes Programme. The lake is currently classified as eutrophic and a Trophic Lake Index (TLI) value of 4.2 has been set as an integrated target for lake water quality. A number of catchment and lake management strategies have been implemented to achieve the targeted TLI including land use changes, wetland enhancement, lake weed harvesting, sediment detainment bunds, sewage reticulation and alum dosing. Alum (aluminium sulphate) is commonly applied to freshwater and wastewater systems to remove phosphorus, reducing its availability for phytoplankton growth. The initiation of alum dosing to the Utuhina Stream in 2006 and the Puarenga Stream in 2010 was associated with a significant decline in water column dissolved reactive phosphorus (DRP) and improvements in water quality of Lake Rotorua. 
The use of alum to control external and internal phosphorus loading has been identified as key component in the restoration of Lake Rotorua and recently observed improvements in water quality suggest that the lake could be transitioning to a more phosphorus limited state. Determination of phytoplankton nutrient limitation in Lake Rotorua was identified as a priority through the 2017 Plan Change 10 Science Review. An initial seasonal nutrient limitation study was carried out in 2019 with nutrient limitation assays conducted at 3-monthly intervals over the course of the year. Nitrogen limitation was indicated for the March assay and nutrient co-limitation for the December period, but results for the winter and spring periods were inconclusive. There has also been increasing recognition that nutrient availability in limnetic systems may vary in response to seasonal changes in external and external loading and even to isolated storm events. 
The University of Waikato was contracted to investigate potential changes in nutrient limitation within Lake Rotorua at sub-monthly time-scales, and to determine if alum dose rates could be optimised to take advantage of periods of phosphorus limitation. Phytoplankton nutrient limitation growth assays were conducted on a fortnightly basis from mid-October 2020 to May 2021. In addition to determination of lake surface nutrient and chlorophyll a concentrations, triplicate 1 L phytoplankton samples were spiked with either phosphorus (0.1 mg-P L⁻¹), nitrogen (1 mg-N L⁻¹) or phosphorus (0.1 mg-P L⁻¹) and nitrogen (1 mg-N L⁻¹) and incubated for 5-days under a single light intensity of 100 μmol m⁻²s⁻¹ PAR at lake surface temperature and photoperiod. Phytoplankton growth responses were measured as comparative chlorophyll a, comparative biomass and net biomass growth. Summarised results from the 16 assays along with the predicted nutrient state from the stoichiometric mass ratio of TN:TP are presented in the table below. 
Under the test conditions nitrogen limitation was indicated for most of the summer months (December–March) and nutrient co-limitation during the spring and late autumn. Only short (~2 weeks) periods of P-limitation were observed, one of which was associated with an intensive storm event at the end of March. These seasonal fluctuations in nitrogen and phosphorus supply are similar to those observed in other temperate limnetic systems. In the spring, external nitrogen and phosphorus loading is high, then decline in the summer as rainfall and associated inflows wane. During the summer, internal loading becomes more important in polymictic lakes due to repeated internal nutrient cycling from stratification and mixing events. This results in phosphorus limitation in the spring, transitioning to nitrogen limitation or colimitation (primarily nitrogen) in the summer, and then returning to phosphorus/colimitation during the winter due to increased nitrogen-loading from the catchment from increased catchment discharge. 
Due to the modest periods of phosphorus limitation indicated by the assays, there appears to be little potential for optimisation of alum dose rates in order capitalise on natural periods of phosphorus limitation. Further, changes in phytoplankton community composition and abundance appear to be more strongly driven by physical environmental factors such as temperature, light and wind speed, than nutrient availability. Although alum dosing is effective in removing DRP from the Utuhina and Puarenga inflows, its assumed effectiveness in reducing internal phosphorus loading in Lake Rotorua requires further evaluation.

text: Phytoplankton nutrient limitation in Lake Rotorua Lake Rotorua is one of 12 lakes jointly managed by the Rotorua Lakes Council, Te Arawa Lakes Trust and the Bay of Plenty Regional Council under the Rotorua Te Arawa Lakes Programme. The lake is currently classified as eutrophic and a Trophic Lake Index (TLI) value of 4.2 has been set as an integrated target for lake water quality. A number of catchment and lake management strategies have been implemented to achieve the targeted TLI including land use changes, wetland enhancement, lake weed harvesting, sediment detainment bunds, sewage reticulation and alum dosing. Alum (aluminium sulphate) is commonly applied to freshwater and wastewater systems to remove phosphorus, reducing its availability for phytoplankton growth. The initiation of alum dosing to the Utuhina Stream in 2006 and the Puarenga Stream in 2010 was associated with a significant decline in water column dissolved reactive phosphorus (DRP) and improvements in water quality of Lake Rotorua. 
The use of alum to control external and internal phosphorus loading has been identified as key component in the restoration of Lake Rotorua and recently observed improvements in water quality suggest that the lake could be transitioning to a more phosphorus limited state. Determination of phytoplankton nutrient limitation in Lake Rotorua was identified as a priority through the 2017 Plan Change 10 Science Review. An initial seasonal nutrient limitation study was carried out in 2019 with nutrient limitation assays conducted at 3-monthly intervals over the course of the year. Nitrogen limitation was indicated for the March assay and nutrient co-limitation for the December period, but results for the winter and spring periods were inconclusive. There has also been increasing recognition that nutrient availability in limnetic systems may vary in response to seasonal changes in external and external loading and even to isolated storm events. 
The University of Waikato was contracted to investigate potential changes in nutrient limitation within Lake Rotorua at sub-monthly time-scales, and to determine if alum dose rates could be optimised to take advantage of periods of phosphorus limitation. Phytoplankton nutrient limitation growth assays were conducted on a fortnightly basis from mid-October 2020 to May 2021. In addition to determination of lake surface nutrient and chlorophyll a concentrations, triplicate 1 L phytoplankton samples were spiked with either phosphorus (0.1 mg-P L⁻¹), nitrogen (1 mg-N L⁻¹) or phosphorus (0.1 mg-P L⁻¹) and nitrogen (1 mg-N L⁻¹) and incubated for 5-days under a single light intensity of 100 μmol m⁻²s⁻¹ PAR at lake surface temperature and photoperiod. Phytoplankton growth responses were measured as comparative chlorophyll a, comparative biomass and net biomass growth. Summarised results from the 16 assays along with the predicted nutrient state from the stoichiometric mass ratio of TN:TP are presented in the table below. 
Under the test conditions nitrogen limitation was indicated for most of the summer months (December–March) and nutrient co-limitation during the spring and late autumn. Only short (~2 weeks) periods of P-limitation were observed, one of which was associated with an intensive storm event at the end of March. These seasonal fluctuations in nitrogen and phosphorus supply are similar to those observed in other temperate limnetic systems. In the spring, external nitrogen and phosphorus loading is high, then decline in the summer as rainfall and associated inflows wane. During the summer, internal loading becomes more important in polymictic lakes due to repeated internal nutrient cycling from stratification and mixing events. This results in phosphorus limitation in the spring, transitioning to nitrogen limitation or colimitation (primarily nitrogen) in the summer, and then returning to phosphorus/colimitation during the winter due to increased nitrogen-loading from the catchment from increased catchment discharge. 
Due to the modest periods of phosphorus limitation indicated by the assays, there appears to be little potential for optimisation of alum dose rates in order capitalise on natural periods of phosphorus limitation. Further, changes in phytoplankton community composition and abundance appear to be more strongly driven by physical environmental factors such as temperature, light and wind speed, than nutrient availability. Although alum dosing is effective in removing DRP from the Utuhina and Puarenga inflows, its assumed effectiveness in reducing internal phosphorus loading in Lake Rotorua requires further evaluation.

year: 2022

title: Will access to COVID-19 vaccine in Aotearoa be equitable for priority populations?

authors: Whitehead, Jesse

abstract: AIM: This research examines the equity implications of the geographic distribution of COVID-19 vaccine delivery locations in Aotearoa New Zealand under five potential scenarios: (1) stadium mega-clinics; (2) Community Based Assessment Centres; (3) GP clinics; (4) community pharmacies; and (5) schools.
METHOD: We mapped the distribution of Aotearoa New Zealand’s population and the location of potential vaccine delivery facilities under each scenario. Geostatistical techniques identified population clusters for Māori, Pacific peoples and people aged 65 years and over. We calculated travel times between all potential facilities and each Statistical Area 1 in the country. Descriptive statistics indicate the size and proportion of populations that could face significant travel barriers when accessing COVID-19 vaccinations.
RESULTS: Several areas with significant travel times to potential vaccine delivery sites were also communities identified as having an elevated risk of COVID-19 disease and severity. All potential scenarios for vaccine delivery, with the exception of schools, resulted in travel barriers for a substantial proportion of the population. Overall, these travel time barriers disproportionately burden Māori, older communities and people living in areas of high socioeconomic deprivation.
CONCLUSION: The equitable delivery of COVID-19 vaccines is key to an elimination strategy. However, if current health services and facilities are used without well-designed and supported outreach services, then access to vaccination is likely to be inequitable.

text: Will access to COVID-19 vaccine in Aotearoa be equitable for priority populations? AIM: This research examines the equity implications of the geographic distribution of COVID-19 vaccine delivery locations in Aotearoa New Zealand under five potential scenarios: (1) stadium mega-clinics; (2) Community Based Assessment Centres; (3) GP clinics; (4) community pharmacies; and (5) schools.
METHOD: We mapped the distribution of Aotearoa New Zealand’s population and the location of potential vaccine delivery facilities under each scenario. Geostatistical techniques identified population clusters for Māori, Pacific peoples and people aged 65 years and over. We calculated travel times between all potential facilities and each Statistical Area 1 in the country. Descriptive statistics indicate the size and proportion of populations that could face significant travel barriers when accessing COVID-19 vaccinations.
RESULTS: Several areas with significant travel times to potential vaccine delivery sites were also communities identified as having an elevated risk of COVID-19 disease and severity. All potential scenarios for vaccine delivery, with the exception of schools, resulted in travel barriers for a substantial proportion of the population. Overall, these travel time barriers disproportionately burden Māori, older communities and people living in areas of high socioeconomic deprivation.
CONCLUSION: The equitable delivery of COVID-19 vaccines is key to an elimination strategy. However, if current health services and facilities are used without well-designed and supported outreach services, then access to vaccination is likely to be inequitable.

year: 2021

title: Per-hop Internet Measurement Protocols

authors: Luckie, Matthew John

subjects: Internet Measurement

abstract: Accurately measuring per-hop packet dynamics on an Internet path is difficult. Currently available techniques have many well-known limitations that can make it difficult to accurately measure per-hop packet dynamics. Much of the difficulty of per-hop measurement is due to the lack of protocol support available to measure an Internet path on a per-hop basis. This thesis classifies common weaknesses and describes a protocol for per-hop measurement of Internet packet dynamics, known as the IP Measurement Protocol, or IPMP. With IPMP, a specially formed probe packet collects information from intermediate routers on the packet's dynamics as the packet is forwarded. This information includes an IP address from the interface that received the packet, a timestamp that records when the packet was received, and a counter that records the arrival order of echo packets belonging to the same flow. Probing a path with IPMP allows the topology of the path to be directly determined, and for direct measurement of per-hop behaviours such as queueing delay, jitter, reordering, and loss. This is useful in many operational situations, as well as for researchers in characterising Internet behaviour.

IPMP's design goals of being tightly constrained and easy to implement are tested by building implementations in hardware and software. Implementations of IPMP presented in this thesis show that an IPMP measurement probe can be processed in hardware without delaying the packet, and processed in software with little overhead. This thesis presents IPMP-based measurement techniques for measuring per-hop packet delay, jitter, loss, reordering, and capacity that are more robust, require less probes to be sent, and are potentially more accurate and convenient than corresponding measurement techniques that do not use IPMP.

text: Per-hop Internet Measurement Protocols Accurately measuring per-hop packet dynamics on an Internet path is difficult. Currently available techniques have many well-known limitations that can make it difficult to accurately measure per-hop packet dynamics. Much of the difficulty of per-hop measurement is due to the lack of protocol support available to measure an Internet path on a per-hop basis. This thesis classifies common weaknesses and describes a protocol for per-hop measurement of Internet packet dynamics, known as the IP Measurement Protocol, or IPMP. With IPMP, a specially formed probe packet collects information from intermediate routers on the packet's dynamics as the packet is forwarded. This information includes an IP address from the interface that received the packet, a timestamp that records when the packet was received, and a counter that records the arrival order of echo packets belonging to the same flow. Probing a path with IPMP allows the topology of the path to be directly determined, and for direct measurement of per-hop behaviours such as queueing delay, jitter, reordering, and loss. This is useful in many operational situations, as well as for researchers in characterising Internet behaviour.

IPMP's design goals of being tightly constrained and easy to implement are tested by building implementations in hardware and software. Implementations of IPMP presented in this thesis show that an IPMP measurement probe can be processed in hardware without delaying the packet, and processed in software with little overhead. This thesis presents IPMP-based measurement techniques for measuring per-hop packet delay, jitter, loss, reordering, and capacity that are more robust, require less probes to be sent, and are potentially more accurate and convenient than corresponding measurement techniques that do not use IPMP.

year: 2007