title: A year in climate change emergency

authors: Daya-Winterbottom, Trevor

abstract: This country report provides an overview of recent case law and legislative amendments regarding climate change mitigation, and the declaration of a climate emergency by the New Zealand Parliament.

text: A year in climate change emergency This country report provides an overview of recent case law and legislative amendments regarding climate change mitigation, and the declaration of a climate emergency by the New Zealand Parliament.

year: 2021-04

title: The positive effects of negative information: Extending one-class classification models in binary proteomic sequence classification

authors: Mutter, Stefan

subjects: computer science

abstract: Profile Hidden Markov Models (PHMMs) have been widely used as models for Multiple Sequence Alignments. By their nature, they are generative one-class classifiers trained only on sequences belonging to the target class they represent. Nevertheless, they are often used to discriminate between classes. In this paper, we investigate the beneficial effects of information from non-target classes in discriminative tasks. Firstly, the traditional PHMM is extended to a new binary classifier. Secondly, we propose propositional representations of the original PHMM that capture information from target and non-target sequences and can be used with standard binary classifiers. Since PHMM training is time intensive, we investigate whether our approach allows the training of the PHMM to stop, before it is fully converged, without loss of predictive power.

text: The positive effects of negative information: Extending one-class classification models in binary proteomic sequence classification Profile Hidden Markov Models (PHMMs) have been widely used as models for Multiple Sequence Alignments. By their nature, they are generative one-class classifiers trained only on sequences belonging to the target class they represent. Nevertheless, they are often used to discriminate between classes. In this paper, we investigate the beneficial effects of information from non-target classes in discriminative tasks. Firstly, the traditional PHMM is extended to a new binary classifier. Secondly, we propose propositional representations of the original PHMM that capture information from target and non-target sequences and can be used with standard binary classifiers. Since PHMM training is time intensive, we investigate whether our approach allows the training of the PHMM to stop, before it is fully converged, without loss of predictive power.

year: 2009

title: The Long Bay Restaurant site, R10/1374: Volume 1, the archaeology (HNZPTA authorities 2015/19 and 2016/81): Report to Heritage New Zealand Pouhere Taonga and Auckland Council

authors: Campbell, M

abstract: Auckland Council had proposed refurbishing the Long Bay Restaurant at Long Bay Regional Park (Lot 2 DP 54616), amounting to a near full rebuild of the structure apart from the in situ foundations. Council began the project in mid-2013 with the partial demolition of the existing structure and sawing of the concrete floor slab to install new utilities. Following the discovery of human remains beneath the floor slab on 2 July 2013, work was halted. The remains were inspected by the New Zealand Police who confirmed that they were pre-European kōiwi tangata. An assessment of the site was then undertaken by Beatrice Hudson of ArchOs Archaeology (Hudson 2013) and the find was recorded as site R10/1374 in the New Zealand Archaeological Association (NZAA) Site Recording Scheme (SRS) (this site number applies to any other archaeological features associated with the wider area). Auckland Council applied to the New Zealand Historic Places Trust (now Heritage New Zealand Pouhere Taonga, HNZPT) for an archaeological authority under section 18 of the Historic Places Act 1993 to undertake archaeological test excavations to investigate the nature, extent and condition of the site, and how it would be affected by the proposed development project. Authority 2014/506 was granted on 28 November 2013 and the investigation was carried out on the 20th and 21st of January 2014 (Campbell et al. 2014) (the 2014 excavation is summarised in Chapter 3).

Auckland Council then applied to HNZPT for an authority under section 44 of the Heritage New Zealand Pouhere Taonga Act 2014 to modify or destroy any further material found during the refurbishment project, including associated car parks and footpaths. Authority 2015/19 was granted on 7 August 2014 and works resumed. On 6 November 2014 further kōiwi were found within the project footprint and work once again ceased. 

Following extensive consultation with mana whenua and HNZPT, Auckland Council determined that the refurbishment would continue but it was agreed that the entire footprint of the development would be cleared archaeologically in order to provide assurance that no further kōiwi would remain within the project area. As the scope of the archaeological investigation had changed, a new archaeological authority, superseding authority 2015/19, was required and a full archaeological assessment of efects was also required in support of the authority application (Campbell and Hudson 2015). Authority 2016/81 was granted by HNZPT on 25 August 2015. This report fulfils the conditions of both authority 2015/19 and 2016/81.

Excavation began on 5 October 2015 with site clearance and removal of the concrete pad but not the ground beam foundations, while full excavation commenced on 12 October under the direction of Matthew Campbell (Excavation Director, CFG Heritage) and Beatrice Hudson (Osteologist, ArchOs Archaeology). Excavation continued until 3 November, by which stage kōiwi of a further 10 individuals had been found, bringing the total to 12. Following an onsite hui on 4 November between representatives of mana whenua, HNZPT, Auckland Council and the excavation team, the excavation was halted but mana whenua requested that the 3 possible burials that had been located but not excavated be lifted, and on 9 November the site was shut down. At a second on site hui on 9 December Auckland Council announced that they had resolved to cancel the restaurant project, but mana whenua expressed a desire that the 13 x 12 m excavation area opened up at the time be excavated to a sterile layer to lift all kōiwi. Excavation resumed on 18 January 2016 and continued until 4 March, when all kōiwi and archaeological deposits and features had been excavated.

text: The Long Bay Restaurant site, R10/1374: Volume 1, the archaeology (HNZPTA authorities 2015/19 and 2016/81): Report to Heritage New Zealand Pouhere Taonga and Auckland Council Auckland Council had proposed refurbishing the Long Bay Restaurant at Long Bay Regional Park (Lot 2 DP 54616), amounting to a near full rebuild of the structure apart from the in situ foundations. Council began the project in mid-2013 with the partial demolition of the existing structure and sawing of the concrete floor slab to install new utilities. Following the discovery of human remains beneath the floor slab on 2 July 2013, work was halted. The remains were inspected by the New Zealand Police who confirmed that they were pre-European kōiwi tangata. An assessment of the site was then undertaken by Beatrice Hudson of ArchOs Archaeology (Hudson 2013) and the find was recorded as site R10/1374 in the New Zealand Archaeological Association (NZAA) Site Recording Scheme (SRS) (this site number applies to any other archaeological features associated with the wider area). Auckland Council applied to the New Zealand Historic Places Trust (now Heritage New Zealand Pouhere Taonga, HNZPT) for an archaeological authority under section 18 of the Historic Places Act 1993 to undertake archaeological test excavations to investigate the nature, extent and condition of the site, and how it would be affected by the proposed development project. Authority 2014/506 was granted on 28 November 2013 and the investigation was carried out on the 20th and 21st of January 2014 (Campbell et al. 2014) (the 2014 excavation is summarised in Chapter 3).

Auckland Council then applied to HNZPT for an authority under section 44 of the Heritage New Zealand Pouhere Taonga Act 2014 to modify or destroy any further material found during the refurbishment project, including associated car parks and footpaths. Authority 2015/19 was granted on 7 August 2014 and works resumed. On 6 November 2014 further kōiwi were found within the project footprint and work once again ceased. 

Following extensive consultation with mana whenua and HNZPT, Auckland Council determined that the refurbishment would continue but it was agreed that the entire footprint of the development would be cleared archaeologically in order to provide assurance that no further kōiwi would remain within the project area. As the scope of the archaeological investigation had changed, a new archaeological authority, superseding authority 2015/19, was required and a full archaeological assessment of efects was also required in support of the authority application (Campbell and Hudson 2015). Authority 2016/81 was granted by HNZPT on 25 August 2015. This report fulfils the conditions of both authority 2015/19 and 2016/81.

Excavation began on 5 October 2015 with site clearance and removal of the concrete pad but not the ground beam foundations, while full excavation commenced on 12 October under the direction of Matthew Campbell (Excavation Director, CFG Heritage) and Beatrice Hudson (Osteologist, ArchOs Archaeology). Excavation continued until 3 November, by which stage kōiwi of a further 10 individuals had been found, bringing the total to 12. Following an onsite hui on 4 November between representatives of mana whenua, HNZPT, Auckland Council and the excavation team, the excavation was halted but mana whenua requested that the 3 possible burials that had been located but not excavated be lifted, and on 9 November the site was shut down. At a second on site hui on 9 December Auckland Council announced that they had resolved to cancel the restaurant project, but mana whenua expressed a desire that the 13 x 12 m excavation area opened up at the time be excavated to a sterile layer to lift all kōiwi. Excavation resumed on 18 January 2016 and continued until 4 March, when all kōiwi and archaeological deposits and features had been excavated.

year: 2019