title: Coupling high-resolution measurements to a three-dimensional lake model to assess the spatial and temporal dynamics of the cyanobacterium Planktothrix rubescens in a medium-sized lake

authors: Carraro, Elisa

subjects: Metalimnion

abstract: In a medium-sized pre-alpine lake (North Italy) the cyanobacterium Planktothrix rubescens has strongly dominated the phytoplankton assemblage since 2000, similar to many pre-alpine lakes, despite improvements in water quality. The objective of this study was to determine the factors governing the spatial distribution of P. rubescens, including the major hydrodynamic processes and the influence of long-term reduction in nutrient concentrations during a period of climate warming. We used an intensive field campaign conducted from February 2010 to January 2011, to evaluate distributions of phytoplankton phyla, as well as P. rubescens, using spectrally resolved fluorescence measurements. These data provided highly spatially and temporally resolved phytoplankton population data suitable to calibrate and validate a coupled three-dimensional hydrodynamic (ELCOM) and ecological model (CAEDYM) of the lake ecosystem. The simulations revealed the fundamental role of physiological features of P. rubescens that led to observed vertical patterns of distribution, notably a deep chlorophyll maximum, and a strong influence of lake hydrodynamic processes, particularly during high-discharge inflows in summer stratification. The simulations are used to examine growth-limiting factors that help to explain the increased prevalence of P. rubescens during re-oligotrophication.

text: Coupling high-resolution measurements to a three-dimensional lake model to assess the spatial and temporal dynamics of the cyanobacterium Planktothrix rubescens in a medium-sized lake In a medium-sized pre-alpine lake (North Italy) the cyanobacterium Planktothrix rubescens has strongly dominated the phytoplankton assemblage since 2000, similar to many pre-alpine lakes, despite improvements in water quality. The objective of this study was to determine the factors governing the spatial distribution of P. rubescens, including the major hydrodynamic processes and the influence of long-term reduction in nutrient concentrations during a period of climate warming. We used an intensive field campaign conducted from February 2010 to January 2011, to evaluate distributions of phytoplankton phyla, as well as P. rubescens, using spectrally resolved fluorescence measurements. These data provided highly spatially and temporally resolved phytoplankton population data suitable to calibrate and validate a coupled three-dimensional hydrodynamic (ELCOM) and ecological model (CAEDYM) of the lake ecosystem. The simulations revealed the fundamental role of physiological features of P. rubescens that led to observed vertical patterns of distribution, notably a deep chlorophyll maximum, and a strong influence of lake hydrodynamic processes, particularly during high-discharge inflows in summer stratification. The simulations are used to examine growth-limiting factors that help to explain the increased prevalence of P. rubescens during re-oligotrophication.

year: 2012

title: Ameliorating Systematic Errors in Full-Field AMCW Lidar

authors: Godbaz, John Peter

subjects: Time of Flight

abstract: This thesis presents an analysis of systematic error in full-field amplitude modulated continuous wave range-imaging systems. The primary focus is on the mixed pixel/multipath interference problem, with digressions into defocus restoration, irregular phase sampling and the systematic phase perturbations introduced by random noise. As an integral part of the thesis, a detailed model of signal formation is developed, that models noise statistics not included in previously reported models.

Prior work on the mixed pixel/multipath interference problem has been limited to detection and removal of perturbed measurements or partial amelioration using spatial information, such as knowledge of the spatially variant scattering point spread function, or raytracing using an assumption of Lambertian reflection. Furthermore, prior art has only used AMCW range measurements at a single modulation frequency. In contrast, in this thesis, by taking multiple measurements at different modulation frequencies with known ratio-of-integers frequency relationships, a range of new closed-form and lookup table based inversion and bounding methods are explored. These methods include: sparse spike train deconvolution based multiple return separation, a closed-form inverse using attenuation ratios and a normalisation based lookup table method that uses a new property we term the characteristic measurement. Other approaches include a Cauchy distribution based model for backscattering sources which are range-diffuse, like fog or hair. Novel bounding methods are developed using the characteristic measurement and attenuation ratios on relative intensity, relative phase and phase perturbutation.

A detailed noise and performance analysis is performed of the characteristic measurement lookup table method and the bounding methods using simulated data. Experiments are performed using the University of Waikato Heterodyne range-imager, the Canesta XZ-422 and the Mesa Imaging Swissranger 4000 in order to demonstrate the performance of the lookup table method. The lookup table method is found to provide an order of magnitude improvement in ranging accuracy, albeit at the expense of ranging precision.

text: Ameliorating Systematic Errors in Full-Field AMCW Lidar This thesis presents an analysis of systematic error in full-field amplitude modulated continuous wave range-imaging systems. The primary focus is on the mixed pixel/multipath interference problem, with digressions into defocus restoration, irregular phase sampling and the systematic phase perturbations introduced by random noise. As an integral part of the thesis, a detailed model of signal formation is developed, that models noise statistics not included in previously reported models.

Prior work on the mixed pixel/multipath interference problem has been limited to detection and removal of perturbed measurements or partial amelioration using spatial information, such as knowledge of the spatially variant scattering point spread function, or raytracing using an assumption of Lambertian reflection. Furthermore, prior art has only used AMCW range measurements at a single modulation frequency. In contrast, in this thesis, by taking multiple measurements at different modulation frequencies with known ratio-of-integers frequency relationships, a range of new closed-form and lookup table based inversion and bounding methods are explored. These methods include: sparse spike train deconvolution based multiple return separation, a closed-form inverse using attenuation ratios and a normalisation based lookup table method that uses a new property we term the characteristic measurement. Other approaches include a Cauchy distribution based model for backscattering sources which are range-diffuse, like fog or hair. Novel bounding methods are developed using the characteristic measurement and attenuation ratios on relative intensity, relative phase and phase perturbutation.

A detailed noise and performance analysis is performed of the characteristic measurement lookup table method and the bounding methods using simulated data. Experiments are performed using the University of Waikato Heterodyne range-imager, the Canesta XZ-422 and the Mesa Imaging Swissranger 4000 in order to demonstrate the performance of the lookup table method. The lookup table method is found to provide an order of magnitude improvement in ranging accuracy, albeit at the expense of ranging precision.

year: 2012

title: Kava and Maaori: New drug fashion or re-engagement with 'kawa'? [Invited presentation]

authors: Aporosa, S. 'Apo'

abstract: It is estimated there are more than 20,000 kava users in New Zealand on an average Friday or Saturday night, with increasing interest and uptake of this indigenous drink by Māori. This presentation argues that some of that increased use of kava by Māori can be interpreted as a cultural expression of pre-migration Hawaiki, rather than simply a new interaction with a foreign drug substance.

text: Kava and Maaori: New drug fashion or re-engagement with 'kawa'? [Invited presentation] It is estimated there are more than 20,000 kava users in New Zealand on an average Friday or Saturday night, with increasing interest and uptake of this indigenous drink by Māori. This presentation argues that some of that increased use of kava by Māori can be interpreted as a cultural expression of pre-migration Hawaiki, rather than simply a new interaction with a foreign drug substance.

year: 2016