title: Fervidobacterium nodosum gen. nov. and spec. nov., a new chemoorganotrophic, caldoactive, anaerobic bacterium

authors: Patel, B.K.C.

subjects: Fervidobacterium nodosum

abstract: A new species of extremely thermophilic, glycolytic anaerobic bacterium, Fervidobacterium nodosum isolated from a New Zealand hot spring, is described. Fervidobacterium nodosum strains were Gram-negative, motile, non-sporulating obligately anaerobic rods that existed singly, in pairs or in chains. Electron micrographs of thin sections revealed a two-layered cell wall structure. The outer layer of the cell wall produced  spheroids , which was a typical feature of this organism. The optimum temperature for growth was 65 to 70° C, the maximum 80° C and the minimum greater than 40° C. Growth occurred between a pH of 6.0 and 8.0 with the optimum being 7.0 to 7.5. The doubling time of Fervidobacterium nodosum at optimal temperature and pH was 105 minutes. The DNA base composition was 33.7% guanine plus cytosine as determined by thermal denaturation. A wide range of carbohydrates including glucose, sucrose, starch and lactose could be utilized by the organism. Lactate, acetate, hydrogen, and carbon dioxide were the major end products of glucose fermentation with lesser amounts of ethanol being formed. Growth was inhibited by tetracycline, penicillin and chloramphenicol indicating that the organism was a eubacterium.

text: Fervidobacterium nodosum gen. nov. and spec. nov., a new chemoorganotrophic, caldoactive, anaerobic bacterium A new species of extremely thermophilic, glycolytic anaerobic bacterium, Fervidobacterium nodosum isolated from a New Zealand hot spring, is described. Fervidobacterium nodosum strains were Gram-negative, motile, non-sporulating obligately anaerobic rods that existed singly, in pairs or in chains. Electron micrographs of thin sections revealed a two-layered cell wall structure. The outer layer of the cell wall produced  spheroids , which was a typical feature of this organism. The optimum temperature for growth was 65 to 70° C, the maximum 80° C and the minimum greater than 40° C. Growth occurred between a pH of 6.0 and 8.0 with the optimum being 7.0 to 7.5. The doubling time of Fervidobacterium nodosum at optimal temperature and pH was 105 minutes. The DNA base composition was 33.7% guanine plus cytosine as determined by thermal denaturation. A wide range of carbohydrates including glucose, sucrose, starch and lactose could be utilized by the organism. Lactate, acetate, hydrogen, and carbon dioxide were the major end products of glucose fermentation with lesser amounts of ethanol being formed. Growth was inhibited by tetracycline, penicillin and chloramphenicol indicating that the organism was a eubacterium.

year: 1985

title: Fake webs, real results: Artificial spiderwebs for eDNA collection

authors: McGaughran, Angela

subjects: artificial spiderwebs

abstract: Environmental DNA (eDNA)-based detection is a valuable biomonitoring tool that is well-developed for water, soil, and scat substrates. Emergent research is focusing on air as a new substrate, including opportunistically collected natural spiderwebs which may have negative impacts on local spider diversity. Here, we design novel artificial spiderwebs and compare their effectiveness with natural spiderwebs and aquatic eDNA approaches for biomonitoring of terrestrial taxa. A total of 33 eDNA samples (18 water, 6 natural spiderwebs, 9 artificial spiderwebs) were collected from a rural property in Palmerston North (Aotearoa New Zealand). Three amplicons (COI, 16S, and ITS) were sequenced for each sample to evaluate the performance of each collection method for detecting invertebrates, vertebrates, and plant/algal taxa. The 16S amplicon performed best in terms of sequencing output and consistency, as well as species accumulation curves, with the COI dataset performing worst for all eDNA collection methods. Alpha diversity varied by amplicon and collection method in both value and consistency among samples, with 16S and ITS retrieving higher diversity for water samples and both artificial and natural webs outperforming water in fungal COI diversity recovery. Ordination plots showed clear differences in sample similarity across biomes, with all three amplicons showing differentiation between water and either web type. However, specialist species were recovered by each of the two web types, with artificial webs consistently recovering more unique diversity than natural webs. Our results suggest that artificial spiderwebs could be a promising new method in the eDNA biomonitoring toolbox, providing biodiversity data that complements water-based collections and, depending on the research question, may serve as a sufficient proxy for natural spiderweb studies.

text: Fake webs, real results: Artificial spiderwebs for eDNA collection Environmental DNA (eDNA)-based detection is a valuable biomonitoring tool that is well-developed for water, soil, and scat substrates. Emergent research is focusing on air as a new substrate, including opportunistically collected natural spiderwebs which may have negative impacts on local spider diversity. Here, we design novel artificial spiderwebs and compare their effectiveness with natural spiderwebs and aquatic eDNA approaches for biomonitoring of terrestrial taxa. A total of 33 eDNA samples (18 water, 6 natural spiderwebs, 9 artificial spiderwebs) were collected from a rural property in Palmerston North (Aotearoa New Zealand). Three amplicons (COI, 16S, and ITS) were sequenced for each sample to evaluate the performance of each collection method for detecting invertebrates, vertebrates, and plant/algal taxa. The 16S amplicon performed best in terms of sequencing output and consistency, as well as species accumulation curves, with the COI dataset performing worst for all eDNA collection methods. Alpha diversity varied by amplicon and collection method in both value and consistency among samples, with 16S and ITS retrieving higher diversity for water samples and both artificial and natural webs outperforming water in fungal COI diversity recovery. Ordination plots showed clear differences in sample similarity across biomes, with all three amplicons showing differentiation between water and either web type. However, specialist species were recovered by each of the two web types, with artificial webs consistently recovering more unique diversity than natural webs. Our results suggest that artificial spiderwebs could be a promising new method in the eDNA biomonitoring toolbox, providing biodiversity data that complements water-based collections and, depending on the research question, may serve as a sufficient proxy for natural spiderweb studies.

year: 2025-11

title: Changing patterns of Otitis Media in the Waikato region during the Covid Pandemic

authors: Becker, Andre

subjects: COVID-19 pandemic

abstract: Introduction. Acute otitis media (AOM) is a common condition of children encountered in general practice. A proportion of children develop otitis media with effusion (OME), which may require tympanostomy and ventilation tube insertion. Aim. The aim of the study was to compare the incidence of AOM in Māori and New Zealand (NZ) European children in general practice and the referral practices to secondary care for tympanostomy and ventilation tube insertion. Methods. The study was conducted in two parts: (1) an analysis of the incidence of AOM and OME in a rural Waikato general practice (Ōtorohanga) with a high Māori population over a 2-year period; and (2) an analysis of all referrals to the otorhinolaryngology (ORL) department at Waikato District Health Board and tympanostomy and ventilation tube insertion by this service over the same period. Results. The incidence of AOM was similar in Māori compared with NZ European children. The incidence declined significantly between 2019 and 2020 and 50% of children with AOM were treated with antibiotics. Referral rates to the ORL department were greater for Māori compared with NZ European children as were tympanostomy and ventilation tube insertion rates. Discussion. Although AOM is common, OME was rarely diagnosed. The clinical guidelines regarding antibiotic use for common conditions are not being readily adopted and further research is needed into this matter. The COVID-19 pandemic had a substantial effect on demand both in general practice and in the hospital sector. This may have been due to a reduction in the incidence of AOM or due to system changes caused by the pandemic.

text: Changing patterns of Otitis Media in the Waikato region during the Covid Pandemic Introduction. Acute otitis media (AOM) is a common condition of children encountered in general practice. A proportion of children develop otitis media with effusion (OME), which may require tympanostomy and ventilation tube insertion. Aim. The aim of the study was to compare the incidence of AOM in Māori and New Zealand (NZ) European children in general practice and the referral practices to secondary care for tympanostomy and ventilation tube insertion. Methods. The study was conducted in two parts: (1) an analysis of the incidence of AOM and OME in a rural Waikato general practice (Ōtorohanga) with a high Māori population over a 2-year period; and (2) an analysis of all referrals to the otorhinolaryngology (ORL) department at Waikato District Health Board and tympanostomy and ventilation tube insertion by this service over the same period. Results. The incidence of AOM was similar in Māori compared with NZ European children. The incidence declined significantly between 2019 and 2020 and 50% of children with AOM were treated with antibiotics. Referral rates to the ORL department were greater for Māori compared with NZ European children as were tympanostomy and ventilation tube insertion rates. Discussion. Although AOM is common, OME was rarely diagnosed. The clinical guidelines regarding antibiotic use for common conditions are not being readily adopted and further research is needed into this matter. The COVID-19 pandemic had a substantial effect on demand both in general practice and in the hospital sector. This may have been due to a reduction in the incidence of AOM or due to system changes caused by the pandemic.

year: 2023