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States Government pier-head line; thence northerly along 
said pier-head line to its intersection with a line parallel 
with, and distant 10 feet easterly from, the existing eas-
terly boundary line of Pier 30–32; thence northerly along 
said parallel line and its northerly prolongation, to a point 
of intersection with a line parallel with, and distant 10 
feet northerly from, the existing northerly boundary of 
Pier 30–32, thence westerly along last said parallel line 
to its intersection with the United States Government 
pier-head line; to the northwesterly line of Bryant Street 
produced northwesterly; thence southwesterly along said 
northwesterly line of Bryant Street produced to the point 
of beginning. 
(c) REQUIREMENT THAT AREA BE IMPROVED.—The 
declaration of nonnavigability under subsection (a) applies 
only to those parts of the area described in subsection (b) 
that are or will be bulkheaded, filled, or otherwise occupied 
by permanent structures and does not affect the applica-
bility of any Federal statute or regulation applicable to 
such parts the day before the date of enactment of this 
Act, including sections 9 and 10 of the Act of March 3, 
1899 (33 U.S.C. 401 and 403; 30 Stat. 1151), commonly 
known as the Rivers and Harbors Appropriation Act of 
1899, section 404 of the Federal Water Pollution Control 
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Act (33 U.S.C. 1344), and the National Environmental 
Policy Act of 1969 (42 U.S.C. 4321 et seq.). 
(d) EXPIRATION DATE.—If, 20 years from the date 
of enactment of this Act, any area or part thereof de-
scribed in subsection (b) is not bulkheaded or filled or oc-
cupied by permanent structures, including marina facili-
ties, in accordance with the requirements set out in sub-
section (c), or if work in connection with any activity per-
mitted in subsection (c) is not commenced within 5 years 
after issuance of such permits, then the declaration of 
nonnavigability for such area or part thereof shall expire. 
SEC. 5055. SAN PABLO BAY, CALIFORNIA, WATERSHED AND 
SUISUN MARSH ECOSYSTEM RESTORATION. 
(a) SAN PABLO BAY WATERSHED, CALIFORNIA.— 
(1) IN GENERAL.—The Secretary shall complete 
work, as expeditiously as possible, on the ongoing 
San Pablo Bay watershed, California, study to deter-
mine the feasibility of opportunities for restoring, 
preserving and protecting the San Pablo Bay water-
shed. 
(2) REPORT.—Not later than March 31, 2008, 
the Secretary shall submit to Congress a report on 
the results of the study. 
(b) SUISUN MARSH, CALIFORNIA.—The Secretary 
shall conduct a comprehensive study to determine the fea-
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sibility of opportunities for restoring, preserving and pro-
tecting the Suisun Marsh, California. 
(c) SAN PABLO AND SUISUN BAY MARSH WATER-
SHED CRITICAL RESTORATION PROJECTS.— 
(1) IN GENERAL.—The Secretary may partici-
pate in critical restoration projects that will produce, 
consistent with Federal programs, projects, and ac-
tivities, immediate and substantial ecosystem res-
toration, preservation, and protection benefits in the 
following sub-watersheds of the San Pablo and 
Suisun Bay Marsh watersheds: 
(A) The tidal areas of the Petaluma River, 
Napa-Sonoma Marsh. 
(B) The shoreline of West Contra Costa 
County. 
(C) Novato Creek. 
(D) Suisun Marsh. 
(E) Gallinas-Miller Creek. 
(2) TYPES
OF
ASSISTANCE.—Participation in 
critical restoration projects under this subsection 
may include assistance for planning, design, or con-
struction. 
(d) NON-FEDERAL
INTERESTS.—Notwithstanding 
section 221(b) of the Flood Control Act of 1970 (42 
U.S.C. 1962d–5b(b)), a non-Federal interest may include 
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for any project undertaken under this section a nonprofit 
entity with the consent of the affected local government. 
(e) CREDIT.—The Secretary shall credit toward the 
non-Federal share of the cost of construction of a project 
under this section— 
(1) the value of any lands, easements, rights-of- 
way, dredged material disposal areas, or relocations 
provided by the non-Federal interest for carrying out 
the project, regardless of the date of acquisition; 
(2) funds received from the CALFED Bay- 
Delta program; and 
(3) the cost of the studies, design, and con-
struction work carried out by the non-Federal inter-
est before the date of execution of a partnership 
agreement for the project if the Secretary deter-
mines that the work is integral to the project. 
(f) AUTHORIZATION OF APPROPRIATIONS.—There is 
authorized to be appropriated to carry out this section 
$40,000,000. 
SEC. 5056. STOCKTON, CALIFORNIA. 
(a) REEVALUATION.—The Secretary shall reevaluate 
the feasibility of the Lower Mosher Slough element and 
the levee extensions on the Upper Calaveras River element 
of the project for flood control, Stockton Metropolitan 
Area, California, carried out under section 211(f)(3) of the 
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Water Resources Development Act of 1996 (110 Stat. 
3683), to determine the eligibility of such elements for re-
imbursement under section 211 of such Act (33 U.S.C. 
701b–13). 
(b) SPECIAL RULES FOR REEVALUATION.—In con-
ducting the reevaluation under subsection (a), the Sec-
retary shall not reject a feasibility determination based on 
one or more of the policies of the Corps of Engineers con-
cerning the frequency of flooding, the drainage area, and 
the amount of runoff. 
(c) REIMBURSEMENT.—If the Secretary determines 
that the elements referred to subsection (a) are feasible, 
the Secretary shall reimburse, subject to appropriations, 
the non-Federal interest under section 211 of the Water 
Resources Development Act of 1996 for the Federal share 
of the cost of such elements. 
SEC. 5057. CHARLES HERVEY TOWNSHEND BREAKWATER, 
NEW HAVEN HARBOR, CONNECTICUT. 
(a) DESIGNATION.—The western breakwater for the 
project for navigation, New Haven Harbor, Connecticut, 
authorized by the first section of the Act of September 
19, 1890 (26 Stat. 426), shall be known and designated 
as the ‘‘Charles Hervey Townshend Breakwater’’. 
(b) REFERENCES.—Any reference in a law, map, reg-
ulation, document, paper, or other record of the United 
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States to the breakwater referred to in subsection (a) shall 
be deemed to be a reference to the ‘‘Charles Hervey 
Townshend Breakwater’’. 
SEC. 5058. FLORIDA KEYS WATER QUALITY IMPROVE-
MENTS. 
Section 109 of the Miscellaneous Appropriations Act, 
2001 (enacted into law by Public Law 106–554) (114 
Stat. 2763A–222) is amended— 
(1) by adding at the end of subsection (e)(2) 
the following: 
‘‘(C) CREDIT FOR WORK PRIOR TO EXECU-
TION OF THE PARTNERSHIP AGREEMENT.—The 
Secretary shall credit toward the non-Federal 
share of the cost of the project— 
‘‘(i) the cost of construction work car-
ried out by the non-Federal interest before 
the date of the partnership agreement for 
the project if the Secretary determines that 
the work is integral to the project; and 
‘‘(ii) the cost of land acquisition car-
ried out by the non-Federal interest for 
projects to be carried out under this sec-
tion.’’; and 
(2) 
in 
subsection 
(f) 
by 
striking 
‘‘$100,000,000’’ and inserting ‘‘$100,000,000, of 
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which not more than $15,000,000 may be used to 
provide planning, design, and construction assistance 
to the Florida Keys Aqueduct Authority for a water 
treatment plant, Florida City, Florida’’. 
SEC. 5059. LAKE WORTH, FLORIDA. 
The Secretary may carry out necessary repairs for 
the Lake Worth bulkhead replacement project, West Palm 
Beach, Florida, at an estimated total cost of $9,000,000. 
SEC. 5060. EAST CENTRAL AND NORTHEAST FLORIDA. 
(a) EAST CENTRAL AND NORTHEAST FLORIDA RE-
GION DEFINED.—In this section, the term ‘‘East Central 
and Northeast Florida Region’’ means Flagler County, St. 
Johns County, Putman County (east of the St. Johns 
River), Seminole County, Volusia County, the towns of 
Winter Park, Maitland, and Palatka, Florida. 
(b) ESTABLISHMENT OF PROGRAM.—The Secretary 
may establish a program to provide environmental assist-
ance to non-Federal interests in the East Central and 
Northeast Florida Region. 
(c) FORM OF ASSISTANCE.—Assistance under this 
section may be in the form of design and construction as-
sistance for water-related environmental infrastructure 
and resource protection and development projects in the 
East Central and Northeast Florida Region, including 
projects for wastewater treatment and related facilities, 
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water supply and related facilities, environmental restora-
tion, and surface water resource protection and develop-
ment. 
(d) OWNERSHIP REQUIREMENT.—The Secretary may 
provide assistance for a project under this section only if 
the project is publicly owned. 
(e) PARTNERSHIP AGREEMENTS.— 
(1) IN GENERAL.—Before providing assistance 
under this section, the Secretary shall enter into a 
partnership agreement with a non-Federal interest 
to provide for design and construction of the project 
to be carried out with the assistance. 
(2) REQUIREMENTS.—Each partnership agree-
ment for a project entered into under this subsection 
shall provide for the following: 
(A) PLAN.—Development by the Secretary, 
in consultation with appropriate Federal and 
State officials, of a facilities or resource protec-
tion and development plan, including appro-
priate engineering plans and specifications. 
(B) LEGAL
AND
INSTITUTIONAL
STRUC-
TURES.—Establishment of such legal and insti-
tutional structures as are necessary to ensure 
the effective long-term operation of the project 
by the non-Federal interest. 
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(3) COST SHARING.— 
(A) IN GENERAL.—The Federal share of 
the project costs under each partnership agree-
ment entered into under this subsection shall be 
75 percent. The Federal share may be provided 
in the form of grants or reimbursements of 
project costs. 
(B) CREDIT FOR WORK.—The non-Federal 
interests shall receive credit for the reasonable 
cost of design work on a project completed by 
the non-Federal interest before entering into a 
partnership agreement with the Secretary for 
such project. 
(C) CREDIT FOR INTEREST.—In case of a 
delay in the funding of the non-Federal share 
of a project that is the subject of an agreement 
under this section, the non-Federal interest 
shall receive credit for reasonable interest in-
curred in providing the non-Federal share of 
the project’s costs. 
(D) LAND, EASEMENTS, AND RIGHTS-OF- 
WAY CREDIT.—The non-Federal interest shall 
receive credit for land, easements, rights-of- 
way, and relocations toward the non-Federal 
share of project costs (including all reasonable 
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costs associated with obtaining permits nec-
essary for the construction, operation, and 
maintenance of the project on publicly owned or 
controlled land), but such credit may not exceed 
25 percent of total project costs. 
(E) OPERATION AND MAINTENANCE.—The 
non-Federal share of operation and mainte-
nance costs for projects constructed with assist-
ance provided under this section shall be 100 
percent. 
(f) APPLICABILITY OF OTHER FEDERAL AND STATE 
LAWS.—Nothing in this section waives, limits, or other-
wise affects the applicability of any provision of Federal 
or State law that would otherwise apply to a project to 
be carried out with assistance provided under this section. 
(g) NONPROFIT ENTITIES.—Notwithstanding section 
221(b) of the Flood Control Act of 1970 (42 U.S.C. 
1962d-5b(b)), for any project undertaken under this sec-
tion, a non-Federal interest may include a nonprofit enti-
ty. 
(h) CORPS OF ENGINEERS EXPENSES.—Ten percent 
of the amounts appropriated to carry out this section may 
be used by the Corps of Engineers district offices to ad-
minister projects under this section at Federal expense. 
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(i) AUTHORIZATION OF APPROPRIATIONS.—There is 
authorized to be appropriated to carry out this section 
$40,000,000. Such sums shall remain available until ex-
pended. 
SEC. 5061. LAKE LANIER, GEORGIA. 
The Secretary may assist local interests with plan-
ning, design, and construction of facilities at the Lake La-
nier Olympic Center, Georgia, at a total cost of 
$5,300,000. 
SEC. 5062. RILEY CREEK RECREATION AREA, IDAHO. 
The Secretary is authorized to carry out the Riley 
Creek Recreation Area Operation Plan of the Albeni Falls 
Management Plan, dated October 2001, for the Riley 
Creek Recreation Area, Albeni Falls Dam, Bonner Coun-
ty, Idaho. 
SEC. 5063. RECONSTRUCTION OF ILLINOIS FLOOD PROTEC-
TION PROJECTS. 
(a) IN GENERAL.—The Secretary may participate in 
the reconstruction of an eligible flood control project if the 
Secretary determines that such reconstruction is not re-
quired as a result of improper operation and maintenance 
of the project by the non-Federal interest. 
(b) COST SHARING.—The non-Federal share of the 
costs for the reconstruction of a flood control project au-
thorized by this section shall be the same non-Federal 
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