Title: Chromosome contacts in activated T cells identify autoimmune disease-candidate genes
Authors: orcid: http://orcid.org/0000-0002-3388-5760
last_name: Burren
first_name: Oliver S
name: Oliver S Burren
affiliations: label: 1
institution: Department of Medicine, University of Cambridge
country: UK
name: Department of Medicine, University of Cambridge , Addenbrooke’s Hospital, Cambridge, CB2 0SP, UK
label: 2
institution: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge
country: UK
name: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge , Cambridge, CB2 0XY, UK
notes: These authors contributed equally to this work.
orcid: http://orcid.org/0000-0002-8505-3202
last_name: Rubio García
first_name: Arcadio
name: Arcadio Rubio García
affiliations: label: 2
institution: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge
country: UK
name: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge , Cambridge, CB2 0XY, UK
notes: Current address: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Nuffield Department of Medicine, University of Oxford, The Wellcome Trust Centre for Human Genetics, Roosevelt Drive, Oxford, OX3 7BN, UK
These authors contributed equally to this work.
last_name: Javierre
first_name: Biola-Maria
name: Biola-Maria Javierre
affiliations: label: 4
institution: Nuclear Dynamics Programme, The Babraham Institute, Babraham Research Campus, Cambridge
country: UK
name: Nuclear Dynamics Programme, The Babraham Institute, Babraham Research Campus, Cambridge , CB22 3AT, UK
notes: These authors contributed equally to this work.
last_name: Rainbow
first_name: Daniel B
name: Daniel B Rainbow
affiliations: label: 2
institution: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge
country: UK
name: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge , Cambridge, CB2 0XY, UK
notes: Current address: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Nuffield Department of Medicine, University of Oxford, The Wellcome Trust Centre for Human Genetics, Roosevelt Drive, Oxford, OX3 7BN, UK
These authors contributed equally to this work.
last_name: Cairns
first_name: Jonathan
name: Jonathan Cairns
affiliations: label: 4
institution: Nuclear Dynamics Programme, The Babraham Institute, Babraham Research Campus, Cambridge
country: UK
name: Nuclear Dynamics Programme, The Babraham Institute, Babraham Research Campus, Cambridge , CB22 3AT, UK
last_name: Cooper
first_name: Nicholas J
name: Nicholas J Cooper
affiliations: label: 2
institution: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge
country: UK
name: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge , Cambridge, CB2 0XY, UK
orcid: http://orcid.org/0000-0003-2460-0759
last_name: Lambourne
first_name: John J
name: John J Lambourne
affiliations: label: 5
institution: Department of Haematology, University of Cambridge
country: UK
name: Department of Haematology, University of Cambridge , Cambridge Biomedical Campus, Long Road, Cambridge, CB2 0PT, UK
orcid: http://orcid.org/0000-0003-0648-1418
last_name: Schofield
first_name: Ellen
name: Ellen Schofield
affiliations: label: 2
institution: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge
country: UK
name: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge , Cambridge, CB2 0XY, UK
last_name: Dopico
first_name: Xaquin Castro
name: Xaquin Castro Dopico
affiliations: label: 2
institution: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge
country: UK
name: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge , Cambridge, CB2 0XY, UK
last_name: Ferreira
first_name: Ricardo C
name: Ricardo C Ferreira
affiliations: label: 2
institution: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge
country: UK
name: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge , Cambridge, CB2 0XY, UK
notes: Current address: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Nuffield Department of Medicine, University of Oxford, The Wellcome Trust Centre for Human Genetics, Roosevelt Drive, Oxford, OX3 7BN, UK
last_name: Coulson
first_name: Richard
name: Richard Coulson
affiliations: label: 2
institution: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge
country: UK
name: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge , Cambridge, CB2 0XY, UK
last_name: Burden
first_name: Frances
name: Frances Burden
affiliations: label: 5
institution: Department of Haematology, University of Cambridge
country: UK
name: Department of Haematology, University of Cambridge , Cambridge Biomedical Campus, Long Road, Cambridge, CB2 0PT, UK
label: 6
institution: National Health Service Blood and Transplant, Cambridge Biomedical Campus
country: UK
name: National Health Service Blood and Transplant, Cambridge Biomedical Campus , Long Road, Cambridge, CB2 0PT, UK
last_name: Rowlston
first_name: Sophia P
name: Sophia P Rowlston
affiliations: label: 5
institution: Department of Haematology, University of Cambridge
country: UK
name: Department of Haematology, University of Cambridge , Cambridge Biomedical Campus, Long Road, Cambridge, CB2 0PT, UK
label: 6
institution: National Health Service Blood and Transplant, Cambridge Biomedical Campus
country: UK
name: National Health Service Blood and Transplant, Cambridge Biomedical Campus , Long Road, Cambridge, CB2 0PT, UK
last_name: Downes
first_name: Kate
name: Kate Downes
affiliations: label: 5
institution: Department of Haematology, University of Cambridge
country: UK
name: Department of Haematology, University of Cambridge , Cambridge Biomedical Campus, Long Road, Cambridge, CB2 0PT, UK
label: 6
institution: National Health Service Blood and Transplant, Cambridge Biomedical Campus
country: UK
name: National Health Service Blood and Transplant, Cambridge Biomedical Campus , Long Road, Cambridge, CB2 0PT, UK
last_name: Wingett
first_name: Steven W
name: Steven W Wingett
affiliations: label: 4
institution: Nuclear Dynamics Programme, The Babraham Institute, Babraham Research Campus, Cambridge
country: UK
name: Nuclear Dynamics Programme, The Babraham Institute, Babraham Research Campus, Cambridge , CB22 3AT, UK
orcid: http://orcid.org/0000-0001-8074-6299
last_name: Frontini
first_name: Mattia
name: Mattia Frontini
affiliations: label: 5
institution: Department of Haematology, University of Cambridge
country: UK
name: Department of Haematology, University of Cambridge , Cambridge Biomedical Campus, Long Road, Cambridge, CB2 0PT, UK
label: 6
institution: National Health Service Blood and Transplant, Cambridge Biomedical Campus
country: UK
name: National Health Service Blood and Transplant, Cambridge Biomedical Campus , Long Road, Cambridge, CB2 0PT, UK
label: 7
institution: British Heart Foundation Centre of Excellence, Division of Cardiovascular Medicine
country: UK
name: British Heart Foundation Centre of Excellence, Division of Cardiovascular Medicine , Addenbrooke’s Hospital, Hills Road, Cambridge, CB2 0QQ, UK
orcid: http://orcid.org/0000-0002-7744-1790
last_name: Ouwehand
first_name: Willem H
name: Willem H Ouwehand
affiliations: label: 5
institution: Department of Haematology, University of Cambridge
country: UK
name: Department of Haematology, University of Cambridge , Cambridge Biomedical Campus, Long Road, Cambridge, CB2 0PT, UK
label: 6
institution: National Health Service Blood and Transplant, Cambridge Biomedical Campus
country: UK
name: National Health Service Blood and Transplant, Cambridge Biomedical Campus , Long Road, Cambridge, CB2 0PT, UK
label: 7
institution: British Heart Foundation Centre of Excellence, Division of Cardiovascular Medicine
country: UK
name: British Heart Foundation Centre of Excellence, Division of Cardiovascular Medicine , Addenbrooke’s Hospital, Hills Road, Cambridge, CB2 0QQ, UK
label: 8
institution: Department of Human Genetics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus
country: UK
name: Department of Human Genetics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus , Hinxton, Cambridge, CB10 1HH, UK
orcid: http://orcid.org/0000-0002-0041-1227
last_name: Fraser
first_name: Peter
name: Peter Fraser
affiliations: label: 4
institution: Nuclear Dynamics Programme, The Babraham Institute, Babraham Research Campus, Cambridge
country: UK
name: Nuclear Dynamics Programme, The Babraham Institute, Babraham Research Campus, Cambridge , CB22 3AT, UK
orcid: http://orcid.org/0000-0002-0383-3943
last_name: Spivakov
first_name: Mikhail
name: Mikhail Spivakov
affiliations: label: 4
institution: Nuclear Dynamics Programme, The Babraham Institute, Babraham Research Campus, Cambridge
country: UK
name: Nuclear Dynamics Programme, The Babraham Institute, Babraham Research Campus, Cambridge , CB22 3AT, UK
orcid: http://orcid.org/0000-0003-2740-8148
last_name: Todd
first_name: John A
name: John A Todd
affiliations: label: 2
institution: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge
country: UK
name: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge , Cambridge, CB2 0XY, UK
notes: Current address: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Nuffield Department of Medicine, University of Oxford, The Wellcome Trust Centre for Human Genetics, Roosevelt Drive, Oxford, OX3 7BN, UK
These authors contributed equally to this work.
orcid: http://orcid.org/0000-0001-7771-0324
last_name: Wicker
first_name: Linda S
name: Linda S Wicker
affiliations: label: 2
institution: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge
country: UK
name: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge , Cambridge, CB2 0XY, UK
notes: Current address: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Nuffield Department of Medicine, University of Oxford, The Wellcome Trust Centre for Human Genetics, Roosevelt Drive, Oxford, OX3 7BN, UK
These authors contributed equally to this work.
orcid: http://orcid.org/0000-0002-9617-9994
last_name: Cutler
first_name: Antony J
name: Antony J Cutler
affiliations: label: 2
institution: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge
country: UK
name: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge , Cambridge, CB2 0XY, UK
notes: Current address: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Nuffield Department of Medicine, University of Oxford, The Wellcome Trust Centre for Human Genetics, Roosevelt Drive, Oxford, OX3 7BN, UK
These authors contributed equally to this work.
last_name: Wallace
first_name: Chris
name: Chris Wallace
affiliations: label: 1
institution: Department of Medicine, University of Cambridge
country: UK
name: Department of Medicine, University of Cambridge , Addenbrooke’s Hospital, Cambridge, CB2 0SP, UK
label: 2
institution: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge
country: UK
name: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge , Cambridge, CB2 0XY, UK
label: 9
institution: MRC Biostatistics Unit, University of Cambridge
country: UK
name: MRC Biostatistics Unit, University of Cambridge , Cambridge Institute of Public Health, Cambridge Biomedical Campus, Cambridge, CB2 0SR, UK
notes: These authors contributed equally to this work.
Affiliations: label: 1
institution: Department of Medicine, University of Cambridge
country: UK
name: Department of Medicine, University of Cambridge , Addenbrooke’s Hospital, Cambridge, CB2 0SP, UK
label: 2
institution: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge
country: UK
name: JDRF/Wellcome Trust Diabetes and Inflammation Laboratory, Department of Medical Genetics, NIHR Cambridge Biomedical Research Centre, Cambridge Institute for Medical Research, University of Cambridge , Cambridge, CB2 0XY, UK
label: 4
institution: Nuclear Dynamics Programme, The Babraham Institute, Babraham Research Campus, Cambridge
country: UK
name: Nuclear Dynamics Programme, The Babraham Institute, Babraham Research Campus, Cambridge , CB22 3AT, UK
label: 5
institution: Department of Haematology, University of Cambridge
country: UK
name: Department of Haematology, University of Cambridge , Cambridge Biomedical Campus, Long Road, Cambridge, CB2 0PT, UK
label: 6
institution: National Health Service Blood and Transplant, Cambridge Biomedical Campus
country: UK
name: National Health Service Blood and Transplant, Cambridge Biomedical Campus , Long Road, Cambridge, CB2 0PT, UK
label: 7
institution: British Heart Foundation Centre of Excellence, Division of Cardiovascular Medicine
country: UK
name: British Heart Foundation Centre of Excellence, Division of Cardiovascular Medicine , Addenbrooke’s Hospital, Hills Road, Cambridge, CB2 0QQ, UK
label: 8
institution: Department of Human Genetics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus
country: UK
name: Department of Human Genetics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus , Hinxton, Cambridge, CB10 1HH, UK
label: 9
institution: MRC Biostatistics Unit, University of Cambridge
country: UK
name: MRC Biostatistics Unit, University of Cambridge , Cambridge Institute of Public Health, Cambridge Biomedical Campus, Cambridge, CB2 0SR, UK
Field: Immunology and Microbiology
Document type: preprint
Year: 2017