dataesr/affiliations-benchmark huggingface dataset:
Title: BioJS-HGV Viewer: Genetic Variation Visualizer
Authors: orcid: http://orcid.org/0000-0001-5202-7633
last_name: Choudhary
first_name: Saket
name: Saket Choudhary
affiliations: label: 1
institution: Molecular and Computational Biology, University of Southern California
country: USA
name: Molecular and Computational Biology, University of Southern California , Los Angeles, California, 90007, USA
orcid: http://orcid.org/0000-0002-1093-8209
last_name: Garcia
first_name: Leyla
name: Leyla Garcia
affiliations: label: 2
institution: European Molecular Biology laboratory - European Bioinformatics Institute (EMBL-EBI)
country: UK
name: European Molecular Biology laboratory - European Bioinformatics Institute (EMBL-EBI) , Hinxton, Cambridge, CB10 1SD, UK
orcid: http://orcid.org/0000-0002-9641-1669
last_name: Nightingale
first_name: Andrew
name: Andrew Nightingale
affiliations: label: 2
institution: European Molecular Biology laboratory - European Bioinformatics Institute (EMBL-EBI)
country: UK
name: European Molecular Biology laboratory - European Bioinformatics Institute (EMBL-EBI) , Hinxton, Cambridge, CB10 1SD, UK
orcid: http://orcid.org/0000-0001-5454-2815
last_name: Martin
first_name: Maria
name: Maria Martin
corresponding: yes
affiliations: label: 2
institution: European Molecular Biology laboratory - European Bioinformatics Institute (EMBL-EBI)
country: UK
name: European Molecular Biology laboratory - European Bioinformatics Institute (EMBL-EBI) , Hinxton, Cambridge, CB10 1SD, UK
Affiliations: label: 1
institution: Molecular and Computational Biology, University of Southern California
country: USA
name: Molecular and Computational Biology, University of Southern California , Los Angeles, California, 90007, USA
label: 2
institution: European Molecular Biology laboratory - European Bioinformatics Institute (EMBL-EBI)
country: UK
name: European Molecular Biology laboratory - European Bioinformatics Institute (EMBL-EBI) , Hinxton, Cambridge, CB10 1SD, UK
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2015
Title: Convergence of topological domain boundaries, insulators, and polytene interbands revealed by high-resolution mapping of chromatin contacts in the early Drosophila melanogaster embryo
Authors: orcid: http://orcid.org/0000-0002-9149-029X
last_name: Stadler
first_name: Michael R.
name: Michael R. Stadler
affiliations: label: 1
institution: Department of Molecular and Cell Biology, University of California
name: Department of Molecular and Cell Biology, University of California , Berkeley, CA
last_name: Haines
first_name: Jenna E.
name: Jenna E. Haines
affiliations: label: 1
institution: Department of Molecular and Cell Biology, University of California
name: Department of Molecular and Cell Biology, University of California , Berkeley, CA
orcid: http://orcid.org/0000-0002-7528-738X
last_name: Eisen
first_name: Michael B.
name: Michael B. Eisen
affiliations: label: 1
institution: Department of Molecular and Cell Biology, University of California
name: Department of Molecular and Cell Biology, University of California , Berkeley, CA
label: 2
institution: Department of Integrative Biology, University of California
name: Department of Integrative Biology, University of California , Berkeley, CA
label: 3
institution: Howard Hughes Medical Institute, University of California
name: Howard Hughes Medical Institute, University of California , Berkeley, CA
Affiliations: label: 1
institution: Department of Molecular and Cell Biology, University of California
name: Department of Molecular and Cell Biology, University of California , Berkeley, CA
label: 2
institution: Department of Integrative Biology, University of California
name: Department of Integrative Biology, University of California , Berkeley, CA
label: 3
institution: Howard Hughes Medical Institute, University of California
name: Howard Hughes Medical Institute, University of California , Berkeley, CA
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: Disrupted reinforcement learning during post-error slowing in ADHD
Authors: orcid: http://orcid.org/0000-0002-4298-9529
last_name: Chevrier
first_name: Andre
name: Andre Chevrier
affiliations: label: 1
institution: The Hospital for Sick Children, Department of Psychiatry
country: Canada
name: The Hospital for Sick Children, Department of Psychiatry , Toronto, Ontario, Canada .
last_name: Bhaijiwala
first_name: Mehereen
name: Mehereen Bhaijiwala
affiliations: label: 1
institution: The Hospital for Sick Children, Department of Psychiatry
country: Canada
name: The Hospital for Sick Children, Department of Psychiatry , Toronto, Ontario, Canada .
last_name: Lipszyc
first_name: Jonathan
name: Jonathan Lipszyc
affiliations: label: 2
institution: University of Ottawa, Department of Family Medicine
country: Canada
name: University of Ottawa, Department of Family Medicine , Ottawa, Ontario, Canada .
last_name: Cheyne
first_name: Douglas
name: Douglas Cheyne
affiliations: label: 3
institution: University of Toronto, Department of Medical Imaging
country: Canada
name: University of Toronto, Department of Medical Imaging , Toronto, Ontario, Canada .
last_name: Graham
first_name: Simon
name: Simon Graham
affiliations: label: 4
institution: University of Toronto, Department of Medical Biophysics
country: Canada
name: University of Toronto, Department of Medical Biophysics , Toronto, Ontario, Canada .
last_name: Schachar
first_name: Russell
name: Russell Schachar
corresponding: yes
affiliations: label: 1
institution: The Hospital for Sick Children, Department of Psychiatry
country: Canada
name: The Hospital for Sick Children, Department of Psychiatry , Toronto, Ontario, Canada .
Affiliations: label: 1
institution: The Hospital for Sick Children, Department of Psychiatry
country: Canada
name: The Hospital for Sick Children, Department of Psychiatry , Toronto, Ontario, Canada .
label: 2
institution: University of Ottawa, Department of Family Medicine
country: Canada
name: University of Ottawa, Department of Family Medicine , Ottawa, Ontario, Canada .
label: 3
institution: University of Toronto, Department of Medical Imaging
country: Canada
name: University of Toronto, Department of Medical Imaging , Toronto, Ontario, Canada .
label: 4
institution: University of Toronto, Department of Medical Biophysics
country: Canada
name: University of Toronto, Department of Medical Biophysics , Toronto, Ontario, Canada .
Field: Medicine
Document type: preprint
Year: 2018
Title: De Novo assembly and annotation of the eastern fence lizard ( Sceloporus undulatus ) transcriptome
Authors: orcid: http://orcid.org/0000-0001-5209-8589
last_name: Grizante
first_name: Mariana B.
name: Mariana B. Grizante
corresponding: yes
affiliations: label: 1
institution: School of Life Sciences, Arizona State University
country: USA
name: School of Life Sciences, Arizona State University , PO Box 874501, Tempe, AZ 85287, USA
last_name: Tollis
first_name: Marc
name: Marc Tollis
affiliations: label: 1
institution: School of Life Sciences, Arizona State University
country: USA
name: School of Life Sciences, Arizona State University , PO Box 874501, Tempe, AZ 85287, USA
label: 2
institution: Biodesign Institute, Arizona State University
country: USA
name: Biodesign Institute, Arizona State University , PO Box 8724501, Tempe, AZ 85287, USA
last_name: Rodriguez
first_name: Juan J.
name: Juan J. Rodriguez
affiliations: label: 1
institution: School of Life Sciences, Arizona State University
country: USA
name: School of Life Sciences, Arizona State University , PO Box 874501, Tempe, AZ 85287, USA
last_name: Levy
first_name: Ofir
name: Ofir Levy
affiliations: label: 1
institution: School of Life Sciences, Arizona State University
country: USA
name: School of Life Sciences, Arizona State University , PO Box 874501, Tempe, AZ 85287, USA
last_name: Angilletta
first_name: Michael J.
name: Michael J. Angilletta
affiliations: label: 1
institution: School of Life Sciences, Arizona State University
country: USA
name: School of Life Sciences, Arizona State University , PO Box 874501, Tempe, AZ 85287, USA
last_name: Kusumi
first_name: Kenro
name: Kenro Kusumi
corresponding: yes
affiliations: label: 1
institution: School of Life Sciences, Arizona State University
country: USA
name: School of Life Sciences, Arizona State University , PO Box 874501, Tempe, AZ 85287, USA
Affiliations: label: 1
institution: School of Life Sciences, Arizona State University
country: USA
name: School of Life Sciences, Arizona State University , PO Box 874501, Tempe, AZ 85287, USA
label: 2
institution: Biodesign Institute, Arizona State University
country: USA
name: Biodesign Institute, Arizona State University , PO Box 8724501, Tempe, AZ 85287, USA
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: Investigation of protein surface polarity and pH-dependent properties using a new web tool: application to antibodies shows that antibody-antigen interfaces tend to be relatively polar
Authors: orcid: http://orcid.org/0000-0002-5424-193X
last_name: Hebditch
first_name: Max
name: Max Hebditch
affiliations: label: 1
institution: School of Chemistry, Manchester Institute of Biotechnology, The University of Manchester
name: School of Chemistry, Manchester Institute of Biotechnology, The University of Manchester , 131 Princess Street, Manchester, M1 7DN
orcid: http://orcid.org/0000-0002-1302-0815
last_name: Warwicker
first_name: Jim
name: Jim Warwicker
affiliations: label: 1
institution: School of Chemistry, Manchester Institute of Biotechnology, The University of Manchester
name: School of Chemistry, Manchester Institute of Biotechnology, The University of Manchester , 131 Princess Street, Manchester, M1 7DN
notes: j.warwicker@manchester.ac.uk
Affiliations: label: 1
institution: School of Chemistry, Manchester Institute of Biotechnology, The University of Manchester
name: School of Chemistry, Manchester Institute of Biotechnology, The University of Manchester , 131 Princess Street, Manchester, M1 7DN
Field: Medicine
Document type: preprint
Year: 2018
Title: Timing of ESCRT-III protein recruitment and membrane scission during HIV-1 assembly
Authors: last_name: Johnson
first_name: Daniel S.
name: Daniel S. Johnson
affiliations: label: 1
institution: Laboratory of Cellular Biophysics, The Rockefeller University
country: USA
name: Laboratory of Cellular Biophysics, The Rockefeller University , New York, NY 10065, USA
label: 2
institution: Department of Physics and Astronomy, Hofstra University
country: USA
name: Department of Physics and Astronomy, Hofstra University , Hempstead, NY 11549, USA
last_name: Bleck
first_name: Marina
name: Marina Bleck
affiliations: label: 1
institution: Laboratory of Cellular Biophysics, The Rockefeller University
country: USA
name: Laboratory of Cellular Biophysics, The Rockefeller University , New York, NY 10065, USA
orcid: http://orcid.org/0000-0002-8615-4224
last_name: Simon
first_name: Sanford M.
name: Sanford M. Simon
affiliations: label: 1
institution: Laboratory of Cellular Biophysics, The Rockefeller University
country: USA
name: Laboratory of Cellular Biophysics, The Rockefeller University , New York, NY 10065, USA
Affiliations: label: 1
institution: Laboratory of Cellular Biophysics, The Rockefeller University
country: USA
name: Laboratory of Cellular Biophysics, The Rockefeller University , New York, NY 10065, USA
label: 2
institution: Department of Physics and Astronomy, Hofstra University
country: USA
name: Department of Physics and Astronomy, Hofstra University , Hempstead, NY 11549, USA
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Decrease of Nibrin expression in chronic hypoxia is associated with hypoxia-induced chemoresistance in medulloblastoma cells
Authors: last_name: Cowman
first_name: Sophie
name: Sophie Cowman
affiliations: label: 1
institution: University of Liverpool, Institute of Integrated Biology, Department of Biochemistry; Centre for Cell Imaging
country: UK
name: University of Liverpool, Institute of Integrated Biology, Department of Biochemistry; Centre for Cell Imaging , Liverpool, L69 7ZB, UK
notes: Contributed equally to the work
last_name: Fan
first_name: Yuen Ngan
name: Yuen Ngan Fan
affiliations: label: 1
institution: University of Liverpool, Institute of Integrated Biology, Department of Biochemistry; Centre for Cell Imaging
country: UK
name: University of Liverpool, Institute of Integrated Biology, Department of Biochemistry; Centre for Cell Imaging , Liverpool, L69 7ZB, UK
label: 2
institution: University of Manchester, Faculty of Biology, Medicine and Health
country: UK
name: Current address: University of Manchester, Faculty of Biology, Medicine and Health , Manchester, M13 9PT, UK
notes: Contributed equally to the work
last_name: Pizer
first_name: Barry
name: Barry Pizer
affiliations: label: 3
institution: Alder Hey Children’s NHS Foundation Trust
country: UK
name: Alder Hey Children’s NHS Foundation Trust , Liverpool, L12 2AP, UK
last_name: Sée
first_name: Violaine
name: Violaine Sée
corresponding: yes
affiliations: label: 1
institution: University of Liverpool, Institute of Integrated Biology, Department of Biochemistry; Centre for Cell Imaging
country: UK
name: University of Liverpool, Institute of Integrated Biology, Department of Biochemistry; Centre for Cell Imaging , Liverpool, L69 7ZB, UK
Affiliations: label: 1
institution: University of Liverpool, Institute of Integrated Biology, Department of Biochemistry; Centre for Cell Imaging
country: UK
name: University of Liverpool, Institute of Integrated Biology, Department of Biochemistry; Centre for Cell Imaging , Liverpool, L69 7ZB, UK
label: 2
institution: University of Manchester, Faculty of Biology, Medicine and Health
country: UK
name: Current address: University of Manchester, Faculty of Biology, Medicine and Health , Manchester, M13 9PT, UK
label: 3
institution: Alder Hey Children’s NHS Foundation Trust
country: UK
name: Alder Hey Children’s NHS Foundation Trust , Liverpool, L12 2AP, UK
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: Competing paths over fitness valleys in growing populations
Authors: last_name: Nicholson
first_name: Michael D.
name: Michael D. Nicholson
affiliations: label: 1
institution: School of Physics and Astronomy, University of Edinburgh
name: School of Physics and Astronomy, University of Edinburgh 21142 mdnicholson5@gmail.com
last_name: Antal
first_name: Tibor
name: Tibor Antal
affiliations: label: 2
institution: School of Mathematics, University of Edinburgh
name: School of Mathematics, University of Edinburgh  Tibor.Antal@ed.ac.uk
Affiliations: label: 1
institution: School of Physics and Astronomy, University of Edinburgh
name: School of Physics and Astronomy, University of Edinburgh 21142 mdnicholson5@gmail.com
label: 2
institution: School of Mathematics, University of Edinburgh
name: School of Mathematics, University of Edinburgh  Tibor.Antal@ed.ac.uk
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Enhancer control of miR-155 expression in Epstein-Barr virus infected B cells
Authors: last_name: David Wood
first_name: C.
name: C. David Wood
affiliations: label: a
institution: School of Life Sciences, University of Sussex
country: UK
name: School of Life Sciences, University of Sussex , Falmer, Brighton, UK
last_name: Carvell
first_name: Thomas
name: Thomas Carvell
affiliations: label: a
institution: School of Life Sciences, University of Sussex
country: UK
name: School of Life Sciences, University of Sussex , Falmer, Brighton, UK
last_name: Gunnell
first_name: Andrea
name: Andrea Gunnell
affiliations: label: a
institution: School of Life Sciences, University of Sussex
country: UK
name: School of Life Sciences, University of Sussex , Falmer, Brighton, UK
last_name: Ojeniyi
first_name: Opeoluwa O.
name: Opeoluwa O. Ojeniyi
affiliations: label: a
institution: School of Life Sciences, University of Sussex
country: UK
name: School of Life Sciences, University of Sussex , Falmer, Brighton, UK
last_name: Osborne
first_name: Cameron
name: Cameron Osborne
affiliations: label: b
institution: Department of Medical and Molecular Genetics, King’s College London School of Medicine, Guy’s Hospital
country: UK
name: Department of Medical and Molecular Genetics, King’s College London School of Medicine, Guy’s Hospital , London, UK
last_name: West
first_name: Michelle J.
name: Michelle J. West
corresponding: yes
affiliations: label: a
institution: School of Life Sciences, University of Sussex
country: UK
name: School of Life Sciences, University of Sussex , Falmer, Brighton, UK
Affiliations: label: a
institution: School of Life Sciences, University of Sussex
country: UK
name: School of Life Sciences, University of Sussex , Falmer, Brighton, UK
label: b
institution: Department of Medical and Molecular Genetics, King’s College London School of Medicine, Guy’s Hospital
country: UK
name: Department of Medical and Molecular Genetics, King’s College London School of Medicine, Guy’s Hospital , London, UK
Field: Medicine
Document type: preprint
Year: 2018
Title: Optimization of Tenocyte Lineage-related Factors from Tonsil-derived Mesenchymal Stem Cells using Response Surface Methodology
Authors: last_name: Lee
first_name: Seung Yeol
name: Seung Yeol Lee
affiliations: label: 1
institution: Department of Orthopaedic Surgery, Ewha Womans University Mokdong Hospital
country: Korea
name: Department of Orthopaedic Surgery, Ewha Womans University Mokdong Hospital , Seoul, Korea .
last_name: Kim
first_name: Hyang
name: Hyang Kim
affiliations: label: 1
institution: Department of Orthopaedic Surgery, Ewha Womans University Mokdong Hospital
country: Korea
name: Department of Orthopaedic Surgery, Ewha Womans University Mokdong Hospital , Seoul, Korea .
label: 2
institution: Ewha Medical Research Institute, School of Medicine, Ewha Womans University
country: Korea
name: Ewha Medical Research Institute, School of Medicine, Ewha Womans University , Seoul, Korea .
last_name: Shin
first_name: Sang-Jin
name: Sang-Jin Shin
affiliations: label: 1
institution: Department of Orthopaedic Surgery, Ewha Womans University Mokdong Hospital
country: Korea
name: Department of Orthopaedic Surgery, Ewha Womans University Mokdong Hospital , Seoul, Korea .
last_name: Kwon
first_name: Soon-Sun
name: Soon-Sun Kwon
corresponding: yes
affiliations: label: 3
institution: Department of Mathematics, College of Natural Sciences, Ajou University
country: Korea
name: Department of Mathematics, College of Natural Sciences, Ajou University , Gyeonggi, Korea .
Affiliations: label: 1
institution: Department of Orthopaedic Surgery, Ewha Womans University Mokdong Hospital
country: Korea
name: Department of Orthopaedic Surgery, Ewha Womans University Mokdong Hospital , Seoul, Korea .
label: 2
institution: Ewha Medical Research Institute, School of Medicine, Ewha Womans University
country: Korea
name: Ewha Medical Research Institute, School of Medicine, Ewha Womans University , Seoul, Korea .
label: 3
institution: Department of Mathematics, College of Natural Sciences, Ajou University
country: Korea
name: Department of Mathematics, College of Natural Sciences, Ajou University , Gyeonggi, Korea .
Field: Medicine
Document type: preprint
Year: 2018
Title: The Unreasonable Effectiveness of Convolutional Neural Networks in Population Genetic Inference
Authors: orcid: http://orcid.org/0000-0003-2106-4196
last_name: Flagel
first_name: Lex
name: Lex Flagel
affiliations: label: 1
institution: Monsanto Company
name: Monsanto Company , Chesterfield, MO.
label: 2
institution: Department of Plant and Microbial Biology, University of Minnesota
name: Department of Plant and Microbial Biology, University of Minnesota , St. Paul, MN.
orcid: http://orcid.org/0000-0002-3392-0220
last_name: Brandvain
first_name: Yaniv
name: Yaniv Brandvain
affiliations: label: 2
institution: Department of Plant and Microbial Biology, University of Minnesota
name: Department of Plant and Microbial Biology, University of Minnesota , St. Paul, MN.
orcid: http://orcid.org/0000-0001-5249-4151
last_name: Schrider
first_name: Daniel R.
name: Daniel R. Schrider
corresponding: yes
affiliations: label: 3
institution: Department of Genetics, University of North Carolina
name: Department of Genetics, University of North Carolina , Chapel Hill, NC.
Affiliations: label: 1
institution: Monsanto Company
name: Monsanto Company , Chesterfield, MO.
label: 2
institution: Department of Plant and Microbial Biology, University of Minnesota
name: Department of Plant and Microbial Biology, University of Minnesota , St. Paul, MN.
label: 3
institution: Department of Genetics, University of North Carolina
name: Department of Genetics, University of North Carolina , Chapel Hill, NC.
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Impact of nutrient cycling on food web stability
Authors: orcid: http://orcid.org/0000-0002-3531-1410
last_name: Quévreux
first_name: Pierre
name: Pierre Quévreux
corresponding: yes
affiliations: label: 1
institution: Sorbonne Universités, Sorbonne Paris Cité, Paris Diderot Univ Paris 07,CNRS, INRA, IRD, UPEC, Institut d’Écologie et des Sciences de l’Environnement – Paris
country: France
name: Sorbonne Universités, Sorbonne Paris Cité, Paris Diderot Univ Paris 07,CNRS, INRA, IRD, UPEC, Institut d’Écologie et des Sciences de l’Environnement – Paris , iEES-Paris, 4 place Jussieu, F-75252 Paris, France
orcid: http://orcid.org/0000-0002-5910-538X
last_name: Barot
first_name: Sébastien
name: Sébastien Barot
affiliations: label: 1
institution: Sorbonne Universités, Sorbonne Paris Cité, Paris Diderot Univ Paris 07,CNRS, INRA, IRD, UPEC, Institut d’Écologie et des Sciences de l’Environnement – Paris
country: France
name: Sorbonne Universités, Sorbonne Paris Cité, Paris Diderot Univ Paris 07,CNRS, INRA, IRD, UPEC, Institut d’Écologie et des Sciences de l’Environnement – Paris , iEES-Paris, 4 place Jussieu, F-75252 Paris, France
last_name: Thébault
first_name: Élisa
name: Élisa Thébault
affiliations: label: 1
institution: Sorbonne Universités, Sorbonne Paris Cité, Paris Diderot Univ Paris 07,CNRS, INRA, IRD, UPEC, Institut d’Écologie et des Sciences de l’Environnement – Paris
country: France
name: Sorbonne Universités, Sorbonne Paris Cité, Paris Diderot Univ Paris 07,CNRS, INRA, IRD, UPEC, Institut d’Écologie et des Sciences de l’Environnement – Paris , iEES-Paris, 4 place Jussieu, F-75252 Paris, France
Affiliations: label: 1
institution: Sorbonne Universités, Sorbonne Paris Cité, Paris Diderot Univ Paris 07,CNRS, INRA, IRD, UPEC, Institut d’Écologie et des Sciences de l’Environnement – Paris
country: France
name: Sorbonne Universités, Sorbonne Paris Cité, Paris Diderot Univ Paris 07,CNRS, INRA, IRD, UPEC, Institut d’Écologie et des Sciences de l’Environnement – Paris , iEES-Paris, 4 place Jussieu, F-75252 Paris, France
Field: Agricultural and Biological Sciences
Document type: preprint
Year: 2018