dataesr/affiliations-benchmark huggingface dataset:
Title: Genetic analysis of the Komagataella phaffii centromeres by a color-based plasmid stability assay
Authors: orcid: http://orcid.org/0000-0002-2038-8749
last_name: Piva
first_name: Luiza Cesca
name: Luiza Cesca Piva
affiliations: label: 1
institution: Laboratório de Biologia Molecular, Universidade de Brasília, Brasília
country: Brazil
name: Laboratório de Biologia Molecular, Universidade de Brasília, Brasília , DF, Brazil , 70910–900.
orcid: http://orcid.org/0000-0001-9252-698X
last_name: Marco
first_name: Janice Lisboa De
name: Janice Lisboa De Marco
affiliations: label: 1
institution: Laboratório de Biologia Molecular, Universidade de Brasília, Brasília
country: Brazil
name: Laboratório de Biologia Molecular, Universidade de Brasília, Brasília , DF, Brazil , 70910–900.
orcid: http://orcid.org/0000-0002-4293-304X
last_name: Moraes
first_name: Lidia Maria Pepe de
name: Lidia Maria Pepe de Moraes
affiliations: label: 1
institution: Laboratório de Biologia Molecular, Universidade de Brasília, Brasília
country: Brazil
name: Laboratório de Biologia Molecular, Universidade de Brasília, Brasília , DF, Brazil , 70910–900.
last_name: Reis
first_name: Viviane Castelo Branco
name: Viviane Castelo Branco Reis
affiliations: label: 1
institution: Laboratório de Biologia Molecular, Universidade de Brasília, Brasília
country: Brazil
name: Laboratório de Biologia Molecular, Universidade de Brasília, Brasília , DF, Brazil , 70910–900.
last_name: Torres
first_name: Fernando Araripe Gonçalves
name: Fernando Araripe Gonçalves Torres
corresponding: yes
affiliations: label: 1
institution: Laboratório de Biologia Molecular, Universidade de Brasília, Brasília
country: Brazil
name: Laboratório de Biologia Molecular, Universidade de Brasília, Brasília , DF, Brazil , 70910–900.
Affiliations: label: 1
institution: Laboratório de Biologia Molecular, Universidade de Brasília, Brasília
country: Brazil
name: Laboratório de Biologia Molecular, Universidade de Brasília, Brasília , DF, Brazil , 70910–900.
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Tools and pipelines for BioNano data: molecule assembly pipeline and FASTA super scaffolding tool
Authors: orcid: http://orcid.org/0000-0002-3756-5270
last_name: Shelton
first_name: Jennifer M
name: Jennifer M Shelton
affiliations: label: 1
institution: KSU/K-INBRE Bioinformatics Center, Division of Biology, Kansas State University
country: USA
name: KSU/K-INBRE Bioinformatics Center, Division of Biology, Kansas State University , Manhattan, KS, USA
orcid: http://orcid.org/0000-0002-3756-5270
last_name: Coleman
first_name: Michelle C
name: Michelle C Coleman
affiliations: label: 1
institution: KSU/K-INBRE Bioinformatics Center, Division of Biology, Kansas State University
country: USA
name: KSU/K-INBRE Bioinformatics Center, Division of Biology, Kansas State University , Manhattan, KS, USA
orcid: http://orcid.org/0000-0002-3756-5270
last_name: Herndon
first_name: Nic
name: Nic Herndon
affiliations: label: 1
institution: KSU/K-INBRE Bioinformatics Center, Division of Biology, Kansas State University
country: USA
name: KSU/K-INBRE Bioinformatics Center, Division of Biology, Kansas State University , Manhattan, KS, USA
orcid: http://orcid.org/0000-0002-3756-5270
last_name: Lu
first_name: Nanyan
name: Nanyan Lu
affiliations: label: 1
institution: KSU/K-INBRE Bioinformatics Center, Division of Biology, Kansas State University
country: USA
name: KSU/K-INBRE Bioinformatics Center, Division of Biology, Kansas State University , Manhattan, KS, USA
orcid: http://orcid.org/0000-0002-3756-5270
last_name: Lam
first_name: Ernest T
name: Ernest T Lam
affiliations: label: 2
institution: BioNano Genomics
country: USA
name: BioNano Genomics , San Diego, CA, USA
orcid: http://orcid.org/0000-0002-3756-5270
last_name: Anantharaman
first_name: Thomas
name: Thomas Anantharaman
affiliations: label: 2
institution: BioNano Genomics
country: USA
name: BioNano Genomics , San Diego, CA, USA
orcid: http://orcid.org/0000-0002-3756-5270
last_name: Sheth
first_name: Palak
name: Palak Sheth
affiliations: label: 2
institution: BioNano Genomics
country: USA
name: BioNano Genomics , San Diego, CA, USA
orcid: http://orcid.org/0000-0002-3756-5270
last_name: Brown
first_name: Susan J
name: Susan J Brown
corresponding: yes
affiliations: label: 1
institution: KSU/K-INBRE Bioinformatics Center, Division of Biology, Kansas State University
country: USA
name: KSU/K-INBRE Bioinformatics Center, Division of Biology, Kansas State University , Manhattan, KS, USA
Affiliations: label: 1
institution: KSU/K-INBRE Bioinformatics Center, Division of Biology, Kansas State University
country: USA
name: KSU/K-INBRE Bioinformatics Center, Division of Biology, Kansas State University , Manhattan, KS, USA
label: 2
institution: BioNano Genomics
country: USA
name: BioNano Genomics , San Diego, CA, USA
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2015
Title: Reconstruction of consensus tissue-specific metabolic models
Authors: orcid: http://orcid.org/0000-0002-0395-5561
last_name: Correia
first_name: Sara
name: Sara Correia
affiliations: label: 1
institution: Centre of Biological Engineering (CEB), University of Minho
country: Portugal
name: Centre of Biological Engineering (CEB), University of Minho , Braga, Portugal
orcid: http://orcid.org/0000-0003-4861-7432
last_name: Costa
first_name: Bruno
name: Bruno Costa
affiliations: label: 2
institution: Life and Health Sciences Research Institute (ICVS), University of Minho
country: Portugal
name: Life and Health Sciences Research Institute (ICVS), University of Minho , Braga, Portugal
orcid: http://orcid.org/0000-0001-8439-8172
last_name: Rocha
first_name: Miguel
name: Miguel Rocha
affiliations: label: 1
institution: Centre of Biological Engineering (CEB), University of Minho
country: Portugal
name: Centre of Biological Engineering (CEB), University of Minho , Braga, Portugal
notes: mrocha@di.uminho.pt
Affiliations: label: 1
institution: Centre of Biological Engineering (CEB), University of Minho
country: Portugal
name: Centre of Biological Engineering (CEB), University of Minho , Braga, Portugal
label: 2
institution: Life and Health Sciences Research Institute (ICVS), University of Minho
country: Portugal
name: Life and Health Sciences Research Institute (ICVS), University of Minho , Braga, Portugal
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Multiple sources of signaling noise in bacterial chemotaxis network
Authors: orcid: http://orcid.org/0000-0001-9051-8003
last_name: Colin
first_name: R.
name: R. Colin
corresponding: yes
affiliations: label: 1
institution: Max Planck Institute for Terrestrial Microbiology and LOEWE Center for Synthetic Microbiology (SYNMIKRO)
country: Germany
name: Max Planck Institute for Terrestrial Microbiology and LOEWE Center for Synthetic Microbiology (SYNMIKRO) , Karl-von-Frisch-Strasse 16, D-35043 Marburg, Germany
notes: Authors contributed equally to this work.
last_name: Rosazza
first_name: C.
name: C. Rosazza
affiliations: label: 1
institution: Max Planck Institute for Terrestrial Microbiology and LOEWE Center for Synthetic Microbiology (SYNMIKRO)
country: Germany
name: Max Planck Institute for Terrestrial Microbiology and LOEWE Center for Synthetic Microbiology (SYNMIKRO) , Karl-von-Frisch-Strasse 16, D-35043 Marburg, Germany
notes: Authors contributed equally to this work.
last_name: Vaknin
first_name: A.
name: A. Vaknin
affiliations: label: 2
institution: The Racah Institute of Physics, the Hebrew University
country: Israel
name: The Racah Institute of Physics, the Hebrew University , Jerusalem 91904, Israel
last_name: Sourjik
first_name: V.
name: V. Sourjik
corresponding: yes
affiliations: label: 1
institution: Max Planck Institute for Terrestrial Microbiology and LOEWE Center for Synthetic Microbiology (SYNMIKRO)
country: Germany
name: Max Planck Institute for Terrestrial Microbiology and LOEWE Center for Synthetic Microbiology (SYNMIKRO) , Karl-von-Frisch-Strasse 16, D-35043 Marburg, Germany
notes: Authors contributed equally to this work.
Affiliations: label: 1
institution: Max Planck Institute for Terrestrial Microbiology and LOEWE Center for Synthetic Microbiology (SYNMIKRO)
country: Germany
name: Max Planck Institute for Terrestrial Microbiology and LOEWE Center for Synthetic Microbiology (SYNMIKRO) , Karl-von-Frisch-Strasse 16, D-35043 Marburg, Germany
label: 2
institution: The Racah Institute of Physics, the Hebrew University
country: Israel
name: The Racah Institute of Physics, the Hebrew University , Jerusalem 91904, Israel
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: Tools for engineering coordinated system behaviour in synthetic microbial consortia
Authors: orcid: http://orcid.org/0000-0001-7202-4827
last_name: Kylilis
first_name: Nicolas
name: Nicolas Kylilis
affiliations: label: a
institution: Department of Bioengineering, Imperial College London
country: United Kingdom
name: Department of Bioengineering, Imperial College London , London SW7 2AZ, United Kingdom
label: c
institution: Centre for Synthetic Biology and Innovation, Imperial College London
country: United Kingdom
name: Centre for Synthetic Biology and Innovation, Imperial College London , London SW7 2AZ, United Kingdom
orcid: http://orcid.org/0000-0002-5560-902X
last_name: Stan
first_name: Guy-Bart
name: Guy-Bart Stan
corresponding: yes
affiliations: label: a
institution: Department of Bioengineering, Imperial College London
country: United Kingdom
name: Department of Bioengineering, Imperial College London , London SW7 2AZ, United Kingdom
label: c
institution: Centre for Synthetic Biology and Innovation, Imperial College London
country: United Kingdom
name: Centre for Synthetic Biology and Innovation, Imperial College London , London SW7 2AZ, United Kingdom
orcid: http://orcid.org/0000-0001-5435-2667
last_name: Polizzi
first_name: Karen M
name: Karen M Polizzi
corresponding: yes
affiliations: label: b
institution: Department of Life Sciences, Imperial College London
country: United Kingdom
name: Department of Life Sciences, Imperial College London , London SW7 2AZ, United Kingdom
label: c
institution: Centre for Synthetic Biology and Innovation, Imperial College London
country: United Kingdom
name: Centre for Synthetic Biology and Innovation, Imperial College London , London SW7 2AZ, United Kingdom
Affiliations: label: a
institution: Department of Bioengineering, Imperial College London
country: United Kingdom
name: Department of Bioengineering, Imperial College London , London SW7 2AZ, United Kingdom
label: b
institution: Department of Life Sciences, Imperial College London
country: United Kingdom
name: Department of Life Sciences, Imperial College London , London SW7 2AZ, United Kingdom
label: c
institution: Centre for Synthetic Biology and Innovation, Imperial College London
country: United Kingdom
name: Centre for Synthetic Biology and Innovation, Imperial College London , London SW7 2AZ, United Kingdom
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: Convergent Evolution During Local Adaptation to Patchy Landscapes
Authors: last_name: Ralph
first_name: Peter L.
name: Peter L. Ralph
affiliations: label: 1
institution: Computational Biology and Bioinformatics, University of Southern California
name: Computational Biology and Bioinformatics, University of Southern California , Los Angeles, CA
last_name: Coop
first_name: Graham
name: Graham Coop
affiliations: label: 2
institution: Center for Population Biology & Department of Evolution and Ecology, University of California – Davis
name: Center for Population Biology & Department of Evolution and Ecology, University of California – Davis , Davis, CA, 95616
Affiliations: label: 1
institution: Computational Biology and Bioinformatics, University of Southern California
name: Computational Biology and Bioinformatics, University of Southern California , Los Angeles, CA
label: 2
institution: Center for Population Biology & Department of Evolution and Ecology, University of California – Davis
name: Center for Population Biology & Department of Evolution and Ecology, University of California – Davis , Davis, CA, 95616
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2014
Title: Lipopolysaccharide-binding protein (LBP) can reverse the amyloid state of fibrin seen or induced in Parkinson’s disease: implications for its aetiology
Authors: orcid: http://orcid.org/0000-0002-9108-2384
last_name: Pretorius
first_name: Etheresia
name: Etheresia Pretorius
affiliations: label: 1
institution: Department of Physiological Sciences, Stellenbosch University
country: South Africa
name: Department of Physiological Sciences, Stellenbosch University , 7602, South Africa .
orcid: http://orcid.org/0000-0003-1399-5601
last_name: Mbotwe
first_name: Sthembile
name: Sthembile Mbotwe
affiliations: label: 2
institution: Department of Physiology, Faculty of Health Sciences, University of Pretoria
country: South Africa
name: Department of Physiology, Faculty of Health Sciences, University of Pretoria , Arcadia 0007, South Africa .
orcid: http://orcid.org/0000-0001-5838-7963
last_name: Kell
first_name: Douglas B.
name: Douglas B. Kell
corresponding: yes
affiliations: label: 3
institution: School of Chemistry
name: School of Chemistry ,
label: 4
institution: The Manchester Institute of Biotechnology
name: The Manchester Institute of Biotechnology ,
label: 5
institution: Centre for Synthetic Biology of Fine and Speciality Chemicals, The University of Manchester
country: UK
name: Centre for Synthetic Biology of Fine and Speciality Chemicals, The University of Manchester , 131 Princess St, MANCHESTER M1 7DN, Lancs, UK
Affiliations: label: 1
institution: Department of Physiological Sciences, Stellenbosch University
country: South Africa
name: Department of Physiological Sciences, Stellenbosch University , 7602, South Africa .
label: 2
institution: Department of Physiology, Faculty of Health Sciences, University of Pretoria
country: South Africa
name: Department of Physiology, Faculty of Health Sciences, University of Pretoria , Arcadia 0007, South Africa .
label: 3
institution: School of Chemistry
name: School of Chemistry ,
label: 4
institution: The Manchester Institute of Biotechnology
name: The Manchester Institute of Biotechnology ,
label: 5
institution: Centre for Synthetic Biology of Fine and Speciality Chemicals, The University of Manchester
country: UK
name: Centre for Synthetic Biology of Fine and Speciality Chemicals, The University of Manchester , 131 Princess St, MANCHESTER M1 7DN, Lancs, UK
Field: Medicine
Document type: preprint
Year: 2017
Title: Identification of Novel and Differentially Expressed MicroRNAs in Goat Enzootic Nasal Adenocarcinoma
Authors: last_name: Wang
first_name: Bin
name: Bin Wang
affiliations: label: 1
institution: College of Veterinary Medicine, Sichuan Agricultural University
country: P. R. China
name: College of Veterinary Medicine, Sichuan Agricultural University , Xin kang Road 46 Ya’ an, Sichuan 625000, P. R. China
last_name: Ye
first_name: Ni
name: Ni Ye
affiliations: label: 1
institution: College of Veterinary Medicine, Sichuan Agricultural University
country: P. R. China
name: College of Veterinary Medicine, Sichuan Agricultural University , Xin kang Road 46 Ya’ an, Sichuan 625000, P. R. China
notes: Ye Ni as the joint first author
last_name: Cao
first_name: San-jie
name: San-jie Cao
affiliations: label: 1
institution: College of Veterinary Medicine, Sichuan Agricultural University
country: P. R. China
name: College of Veterinary Medicine, Sichuan Agricultural University , Xin kang Road 46 Ya’ an, Sichuan 625000, P. R. China
last_name: Wen
first_name: Xin-tian
name: Xin-tian Wen
affiliations: label: 1
institution: College of Veterinary Medicine, Sichuan Agricultural University
country: P. R. China
name: College of Veterinary Medicine, Sichuan Agricultural University , Xin kang Road 46 Ya’ an, Sichuan 625000, P. R. China
last_name: Huang
first_name: Yongxs
name: Yongxs Huang
affiliations: label: 1
institution: College of Veterinary Medicine, Sichuan Agricultural University
country: P. R. China
name: College of Veterinary Medicine, Sichuan Agricultural University , Xin kang Road 46 Ya’ an, Sichuan 625000, P. R. China
last_name: Yan
first_name: Qi-gui
name: Qi-gui Yan
corresponding: yes
affiliations: label: 1
institution: College of Veterinary Medicine, Sichuan Agricultural University
country: P. R. China
name: College of Veterinary Medicine, Sichuan Agricultural University , Xin kang Road 46 Ya’ an, Sichuan 625000, P. R. China
notes: Yan Qi-gui as the corresponding author
Affiliations: label: 1
institution: College of Veterinary Medicine, Sichuan Agricultural University
country: P. R. China
name: College of Veterinary Medicine, Sichuan Agricultural University , Xin kang Road 46 Ya’ an, Sichuan 625000, P. R. China
Field: Veterinary
Document type: preprint
Year: 2016
Title: species2vec: A novel method for species representation
Authors: orcid: http://orcid.org/0000-0001-5068-4234
last_name: Angelov
first_name: Boyan
name: Boyan Angelov
affiliations: label: 1
institution: MindMatch GmbH
name: MindMatch GmbH
notes: boyan.angelov@gmail.com
Affiliations: label: 1
institution: MindMatch GmbH
name: MindMatch GmbH
Field: Environmental Science
Document type: preprint
Year: 2018
Title: Biogeography & Environmental Conditions Shape Phage & Bacteria Interaction Networks Across the Human Microbiome
Authors: last_name: Hannigan
first_name: Geoffrey D
name: Geoffrey D Hannigan
affiliations: label: 1
institution: Department of Microbiology & Immunology, University of Michigan
name: Department of Microbiology & Immunology, University of Michigan , Ann Arbor, Michigan, 48109
last_name: Duhaime
first_name: Melissa B
name: Melissa B Duhaime
affiliations: label: 2
institution: Department of Ecology & Evolutionary Biology, University of Michigan
name: Department of Ecology & Evolutionary Biology, University of Michigan , Ann Arbor, Michigan, 48109
last_name: Koutra
first_name: Danai
name: Danai Koutra
affiliations: label: 3
institution: Department of Computer Science, University of Michigan
name: Department of Computer Science, University of Michigan , Ann Arbor, Michigan, 48109
orcid: http://orcid.org/0000-0002-6935-4275
last_name: Schloss
first_name: Patrick D
name: Patrick D Schloss
corresponding: yes
affiliations: label: 1
institution: Department of Microbiology & Immunology, University of Michigan
name: Department of Microbiology & Immunology, University of Michigan , Ann Arbor, Michigan, 48109
Affiliations: label: 1
institution: Department of Microbiology & Immunology, University of Michigan
name: Department of Microbiology & Immunology, University of Michigan , Ann Arbor, Michigan, 48109
label: 2
institution: Department of Ecology & Evolutionary Biology, University of Michigan
name: Department of Ecology & Evolutionary Biology, University of Michigan , Ann Arbor, Michigan, 48109
label: 3
institution: Department of Computer Science, University of Michigan
name: Department of Computer Science, University of Michigan , Ann Arbor, Michigan, 48109
Field: Environmental Science
Document type: preprint
Year: 2017
Title: Identifying core biological processes distinguishing human eye tissues with systems-level gene expression analyses and weighted correlation networks
Authors: orcid: http://orcid.org/0000-0003-2085-5113
last_name: Bryan
first_name: John M
name: John M Bryan
affiliations: label: †
institution: Ophthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health
country: United States of America
name: † Ophthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health , United States of America
orcid: http://orcid.org/0000-0003-3015-3545
last_name: Hufnagel
first_name: Robert B
name: Robert B Hufnagel
affiliations: label: †
institution: Ophthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health
country: United States of America
name: † Ophthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health , United States of America
last_name: Brooks
first_name: Brian P
name: Brian P Brooks
affiliations: label: †
institution: Ophthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health
country: United States of America
name: † Ophthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health , United States of America
orcid: http://orcid.org/0000-0002-9224-2888
last_name: McGaughey
first_name: David M
name: David M McGaughey
corresponding: yes
affiliations: label: †
institution: Ophthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health
country: United States of America
name: † Ophthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health , United States of America
Affiliations: label: †
institution: Ophthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health
country: United States of America
name: † Ophthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health , United States of America
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017