Title: SRST2: Rapid genomic surveillance for public health and hospital microbiology labs
Authors: last_name: Inouye
first_name: Michael
name: Michael Inouye
affiliations: label: 1
institution: Medical Systems Biology, Department of Pathology, The University of Melbourne
country: Australia
name: Medical Systems Biology, Department of Pathology, The University of Melbourne , Parkville, Victoria, Australia
label: 2
institution: Department of Microbiology and Immunology, The University of Melbourne
country: Australia
name: Department of Microbiology and Immunology, The University of Melbourne , Parkville, Victoria, Australia
last_name: Dashnow
first_name: Harriet
name: Harriet Dashnow
affiliations: label: 3
institution: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne
country: Australia
name: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne , Parkville, Victoria 3010, Australia
label: 4
institution: Victorian Life Sciences Computation Initiative, The University of Melbourne
country: Australia
name: Victorian Life Sciences Computation Initiative, The University of Melbourne , 187 Grattan Street Carlton, Melbourne, Victoria, Australia
last_name: Raven
first_name: Lesley
name: Lesley Raven
affiliations: label: 1
institution: Medical Systems Biology, Department of Pathology, The University of Melbourne
country: Australia
name: Medical Systems Biology, Department of Pathology, The University of Melbourne , Parkville, Victoria, Australia
last_name: Schultz
first_name: Mark B.
name: Mark B. Schultz
affiliations: label: 3
institution: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne
country: Australia
name: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne , Parkville, Victoria 3010, Australia
last_name: Pope
first_name: Bernard J.
name: Bernard J. Pope
affiliations: label: 4
institution: Victorian Life Sciences Computation Initiative, The University of Melbourne
country: Australia
name: Victorian Life Sciences Computation Initiative, The University of Melbourne , 187 Grattan Street Carlton, Melbourne, Victoria, Australia
label: 5
institution: Department of Computing and Information Systems, The University of Melbourne
country: Australia
name: Department of Computing and Information Systems, The University of Melbourne , Parkville, Victoria, Australia
last_name: Tomita
first_name: Takehiro
name: Takehiro Tomita
affiliations: label: 2
institution: Department of Microbiology and Immunology, The University of Melbourne
country: Australia
name: Department of Microbiology and Immunology, The University of Melbourne , Parkville, Victoria, Australia
label: 6
institution: Microbiological Diagnostic Unit, The University of Melbourne
country: Australia
name: Microbiological Diagnostic Unit, The University of Melbourne , Parkville, Victoria, Australia
last_name: Zobel
first_name: Justin
name: Justin Zobel
affiliations: label: 5
institution: Department of Computing and Information Systems, The University of Melbourne
country: Australia
name: Department of Computing and Information Systems, The University of Melbourne , Parkville, Victoria, Australia
last_name: Holt
first_name: Kathryn E.
name: Kathryn E. Holt
corresponding: yes
affiliations: label: 3
institution: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne
country: Australia
name: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne , Parkville, Victoria 3010, Australia
Affiliations: label: 1
institution: Medical Systems Biology, Department of Pathology, The University of Melbourne
country: Australia
name: Medical Systems Biology, Department of Pathology, The University of Melbourne , Parkville, Victoria, Australia
label: 2
institution: Department of Microbiology and Immunology, The University of Melbourne
country: Australia
name: Department of Microbiology and Immunology, The University of Melbourne , Parkville, Victoria, Australia
label: 3
institution: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne
country: Australia
name: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne , Parkville, Victoria 3010, Australia
label: 4
institution: Victorian Life Sciences Computation Initiative, The University of Melbourne
country: Australia
name: Victorian Life Sciences Computation Initiative, The University of Melbourne , 187 Grattan Street Carlton, Melbourne, Victoria, Australia
label: 5
institution: Department of Computing and Information Systems, The University of Melbourne
country: Australia
name: Department of Computing and Information Systems, The University of Melbourne , Parkville, Victoria, Australia
label: 6
institution: Microbiological Diagnostic Unit, The University of Melbourne
country: Australia
name: Microbiological Diagnostic Unit, The University of Melbourne , Parkville, Victoria, Australia
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2014