dataesr/affiliations-benchmark huggingface dataset:
Title: propr: An R-package for Identifying Proportionally Abundant Features Using Compositional Data Analysis
Authors: last_name: Quinn
first_name: Thomas
name: Thomas Quinn
affiliations: label: 1
institution: Bioinformatics Core Research Group, Deakin University
country: Australia
name: Bioinformatics Core Research Group, Deakin University , Geelong, Victoria, Australia
label: 2
institution: School of Medicine, MMR, Deakin University
country: Australia
name: School of Medicine, MMR, Deakin University , Geelong, Victoria, Australia
notes: contacttomquinn@gmail.com
last_name: Richardson
first_name: Mark F.
name: Mark F. Richardson
affiliations: label: 1
institution: Bioinformatics Core Research Group, Deakin University
country: Australia
name: Bioinformatics Core Research Group, Deakin University , Geelong, Victoria, Australia
label: 2
institution: School of Medicine, MMR, Deakin University
country: Australia
name: School of Medicine, MMR, Deakin University , Geelong, Victoria, Australia
last_name: Lovell
first_name: David
name: David Lovell
affiliations: label: 3
institution: Queensland University of Technology
country: Australia
name: Queensland University of Technology , Brisbane, Queensland, Australia
last_name: Crowley
first_name: Tamsyn
name: Tamsyn Crowley
affiliations: label: 1
institution: Bioinformatics Core Research Group, Deakin University
country: Australia
name: Bioinformatics Core Research Group, Deakin University , Geelong, Victoria, Australia
label: 2
institution: School of Medicine, MMR, Deakin University
country: Australia
name: School of Medicine, MMR, Deakin University , Geelong, Victoria, Australia
Affiliations: label: 1
institution: Bioinformatics Core Research Group, Deakin University
country: Australia
name: Bioinformatics Core Research Group, Deakin University , Geelong, Victoria, Australia
label: 2
institution: School of Medicine, MMR, Deakin University
country: Australia
name: School of Medicine, MMR, Deakin University , Geelong, Victoria, Australia
label: 3
institution: Queensland University of Technology
country: Australia
name: Queensland University of Technology , Brisbane, Queensland, Australia
Field: Computer Science
Document type: preprint
Year: 2017
Title: Variations in the phagosomal environment of human neutrophils and mononuclear phagocyte subsets
Authors: last_name: Foote
first_name: Juliet R.
name: Juliet R. Foote
notes: Joint first author
last_name: Patel
first_name: Amit A.
name: Amit A. Patel
notes: Joint first author
orcid: http://orcid.org/0000-0002-3984-2008
last_name: Yona
first_name: Simon
name: Simon Yona
corresponding: yes
orcid: http://orcid.org/0000-0001-7602-9043
last_name: Segal
first_name: Anthony W.
name: Anthony W. Segal
corresponding: yes
Affiliations: institution: Division of Medicine, University College London
name: Division of Medicine, University College London , 5 University Street, London WC1E 6JF, Telephone: +442076796175
Field: Immunology and Microbiology
Document type: preprint
Year: 2018
Title: Estimating environmental suitability
Authors: last_name: Drake
first_name: John M.
name: John M. Drake
corresponding: yes
affiliations: label: 1
institution: Odum School of Ecology, University of Georgia
country: USA
name: Odum School of Ecology, University of Georgia , Athens, GA 30602-2202, USA
label: 2
institution: Center for the Ecology of Infectious Diseases, University of Georgia
country: USA
name: Center for the Ecology of Infectious Diseases, University of Georgia , Athens, GA 30602-2202, USA
label: 3
institution: Department of Zoology, Oxford University Oxford
name: Department of Zoology, Oxford University Oxford , OX1 3PS UK
notes: E-mail: jdrake@uga.edu
last_name: Richards
first_name: Robert L.
name: Robert L. Richards
affiliations: label: 1
institution: Odum School of Ecology, University of Georgia
country: USA
name: Odum School of Ecology, University of Georgia , Athens, GA 30602-2202, USA
label: 2
institution: Center for the Ecology of Infectious Diseases, University of Georgia
country: USA
name: Center for the Ecology of Infectious Diseases, University of Georgia , Athens, GA 30602-2202, USA
Affiliations: label: 1
institution: Odum School of Ecology, University of Georgia
country: USA
name: Odum School of Ecology, University of Georgia , Athens, GA 30602-2202, USA
label: 2
institution: Center for the Ecology of Infectious Diseases, University of Georgia
country: USA
name: Center for the Ecology of Infectious Diseases, University of Georgia , Athens, GA 30602-2202, USA
label: 3
institution: Department of Zoology, Oxford University Oxford
name: Department of Zoology, Oxford University Oxford , OX1 3PS UK
Field: Environmental Science
Document type: preprint
Year: 2017
Title: All-in-One Adeno-associated Virus Delivery and Genome Editing by Neisseria meningitidis Cas9 in vivo
Authors: orcid: http://orcid.org/0000-0002-0961-7299
last_name: Ibraheim
first_name: Raed
name: Raed Ibraheim
affiliations: label: 1
institution: RNA Therapeutics Institute
name: RNA Therapeutics Institute
last_name: Song
first_name: Chun-Qing
name: Chun-Qing Song
affiliations: label: 1
institution: RNA Therapeutics Institute
name: RNA Therapeutics Institute
orcid: http://orcid.org/0000-0003-0144-3914
last_name: Mir
first_name: Aamir
name: Aamir Mir
affiliations: label: 1
institution: RNA Therapeutics Institute
name: RNA Therapeutics Institute
last_name: Amrani
first_name: Nadia
name: Nadia Amrani
affiliations: label: 1
institution: RNA Therapeutics Institute
name: RNA Therapeutics Institute
orcid: http://orcid.org/0000-0002-9797-8042
last_name: Xue
first_name: Wen
name: Wen Xue
affiliations: label: 1
institution: RNA Therapeutics Institute
name: RNA Therapeutics Institute
label: 2
institution: Program in Molecular Medicine, University of Massachusetts Medical School, Worcester
country: U.S.A.
name: Program in Molecular Medicine, University of Massachusetts Medical School, Worcester , MA 01605, U.S.A.
orcid: http://orcid.org/0000-0002-0881-0310
last_name: Sontheimer
first_name: Erik J.
name: Erik J. Sontheimer
corresponding: yes
affiliations: label: 1
institution: RNA Therapeutics Institute
name: RNA Therapeutics Institute
label: 2
institution: Program in Molecular Medicine, University of Massachusetts Medical School, Worcester
country: U.S.A.
name: Program in Molecular Medicine, University of Massachusetts Medical School, Worcester , MA 01605, U.S.A.
Affiliations: label: 1
institution: RNA Therapeutics Institute
name: RNA Therapeutics Institute
label: 2
institution: Program in Molecular Medicine, University of Massachusetts Medical School, Worcester
country: U.S.A.
name: Program in Molecular Medicine, University of Massachusetts Medical School, Worcester , MA 01605, U.S.A.
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Deciphering the combinatorial influence of diet and the microbiota on experimental colitis
Authors: last_name: Llewellyn
first_name: Sean R.
name: Sean R. Llewellyn
affiliations: label: 1
institution: Immunology Institute
name: Immunology Institute
label: 2
institution: Institute for Genomics and Multiscale Biology
name: Institute for Genomics and Multiscale Biology
last_name: Britton
first_name: Graham J.
name: Graham J. Britton
affiliations: label: 1
institution: Immunology Institute
name: Immunology Institute
label: 2
institution: Institute for Genomics and Multiscale Biology
name: Institute for Genomics and Multiscale Biology
last_name: Contijoch
first_name: Eduardo J.
name: Eduardo J. Contijoch
affiliations: label: 1
institution: Immunology Institute
name: Immunology Institute
label: 2
institution: Institute for Genomics and Multiscale Biology
name: Institute for Genomics and Multiscale Biology
last_name: Mortha
first_name: Arthur
name: Arthur Mortha
affiliations: label: 1
institution: Immunology Institute
name: Immunology Institute
notes: current address: Department of Immunology, University of Toronto, Toronto, ON M5S1A8
last_name: Colombel
first_name: Jean-Frederic
name: Jean-Frederic Colombel
affiliations: label: 3
institution: Division of Gastroenterology
name: Division of Gastroenterology
last_name: Grinspan
first_name: Ari
name: Ari Grinspan
affiliations: label: 3
institution: Division of Gastroenterology
name: Division of Gastroenterology
last_name: Clemente
first_name: Jose C.
name: Jose C. Clemente
affiliations: label: 1
institution: Immunology Institute
name: Immunology Institute
label: 2
institution: Institute for Genomics and Multiscale Biology
name: Institute for Genomics and Multiscale Biology
last_name: Merad
first_name: Miriam
name: Miriam Merad
affiliations: label: 1
institution: Immunology Institute
name: Immunology Institute
label: 4
institution: Department of Oncological Science
name: Department of Oncological Science
label: 5
institution: The Tisch Cancer Institute
name: The Tisch Cancer Institute , Icahn School of Medicine at Mount Sinai, New York, NY 10029
last_name: Faith
first_name: Jeremiah J.
name: Jeremiah J. Faith
corresponding: yes
affiliations: label: 1
institution: Immunology Institute
name: Immunology Institute
label: 2
institution: Institute for Genomics and Multiscale Biology
name: Institute for Genomics and Multiscale Biology
Affiliations: label: 1
institution: Immunology Institute
name: Immunology Institute
label: 2
institution: Institute for Genomics and Multiscale Biology
name: Institute for Genomics and Multiscale Biology
label: 3
institution: Division of Gastroenterology
name: Division of Gastroenterology
label: 4
institution: Department of Oncological Science
name: Department of Oncological Science
label: 5
institution: The Tisch Cancer Institute
name: The Tisch Cancer Institute , Icahn School of Medicine at Mount Sinai, New York, NY 10029
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: Movement Improves the Quality of Temporal Perception and Decision Making
Authors: last_name: Wiener
first_name: Martin
name: Martin Wiener
affiliations: label: 1
institution: George Mason University
name: George Mason University
last_name: Zhou
first_name: Wei Wei
name: Wei Wei Zhou
affiliations: label: 1
institution: George Mason University
name: George Mason University
last_name: Joiner
first_name: Wilsaan
name: Wilsaan Joiner
affiliations: label: 1
institution: George Mason University
name: George Mason University
label: 2
institution: University of California
name: University of California , Davis
Affiliations: label: 1
institution: George Mason University
name: George Mason University
label: 2
institution: University of California
name: University of California , Davis
Field: Neuroscience
Document type: preprint
Year: 2018
Title: Attentional modulation of orthographic neighborhood effects during reading: Evidence from event-related brain potentials in a psychological refractory period paradigm
Authors: orcid: http://orcid.org/0000-0001-7729-1027
last_name: Rabovsky
first_name: Milena
name: Milena Rabovsky
corresponding: yes
affiliations: label: a
institution: Freie Universität Berlin
country: Germany
name: Freie Universität Berlin , Department of Psychology, Berlin, Germany
last_name: Conrad
first_name: Markus
name: Markus Conrad
affiliations: label: c
institution: Universidad de La Laguna
country: Spain
name: Universidad de La Laguna , Department of Psychology, Tenerife, Spain
last_name: Álvarez
first_name: Carlos J.
name: Carlos J. Álvarez
affiliations: label: c
institution: Universidad de La Laguna
country: Spain
name: Universidad de La Laguna , Department of Psychology, Tenerife, Spain
last_name: Paschke-Goldt
first_name: Jörg
name: Jörg Paschke-Goldt
affiliations: label: b
institution: Humboldt-Universität zu Berlin
country: Germany
name: Humboldt-Universität zu Berlin , Department of Psychology, Berlin, Germany
last_name: Sommer
first_name: Werner
name: Werner Sommer
affiliations: label: b
institution: Humboldt-Universität zu Berlin
country: Germany
name: Humboldt-Universität zu Berlin , Department of Psychology, Berlin, Germany
Affiliations: label: a
institution: Freie Universität Berlin
country: Germany
name: Freie Universität Berlin , Department of Psychology, Berlin, Germany
label: b
institution: Humboldt-Universität zu Berlin
country: Germany
name: Humboldt-Universität zu Berlin , Department of Psychology, Berlin, Germany
label: c
institution: Universidad de La Laguna
country: Spain
name: Universidad de La Laguna , Department of Psychology, Tenerife, Spain
Field: Psychology
Document type: preprint
Year: 2018
Title: Gene Expression: edgeRun: an R package for sensitive, functionally relevant differential expression discovery using an unconditional exact test
Authors: last_name: Dimont
first_name: Emmanuel
name: Emmanuel Dimont
corresponding: yes
affiliations: label: 1
institution: Department of Biostatistics, Harvard School of Public Health
country: USA
name: Department of Biostatistics, Harvard School of Public Health , 655 Huntington Ave, Boston, MA 02115, USA
last_name: Shi
first_name: Jiantao
name: Jiantao Shi
affiliations: label: 1
institution: Department of Biostatistics, Harvard School of Public Health
country: USA
name: Department of Biostatistics, Harvard School of Public Health , 655 Huntington Ave, Boston, MA 02115, USA
last_name: Kirchner
first_name: Rory
name: Rory Kirchner
affiliations: label: 1
institution: Department of Biostatistics, Harvard School of Public Health
country: USA
name: Department of Biostatistics, Harvard School of Public Health , 655 Huntington Ave, Boston, MA 02115, USA
last_name: Hide
first_name: Winston
name: Winston Hide
affiliations: label: 1
institution: Department of Biostatistics, Harvard School of Public Health
country: USA
name: Department of Biostatistics, Harvard School of Public Health , 655 Huntington Ave, Boston, MA 02115, USA
label: 2
institution: Harvard Stem Cell Institute
country: USA
name: Harvard Stem Cell Institute , 1350 Massachusetts Ave, Cambridge, MA 02138, USA
label: 3
institution: Sheffield Institute of Translational Neuroscience, University of Sheffield
country: United Kingdom
name: Sheffield Institute of Translational Neuroscience, University of Sheffield , 385a Glossop Road, Sheffield, S10 2HQ, United Kingdom
Affiliations: label: 1
institution: Department of Biostatistics, Harvard School of Public Health
country: USA
name: Department of Biostatistics, Harvard School of Public Health , 655 Huntington Ave, Boston, MA 02115, USA
label: 2
institution: Harvard Stem Cell Institute
country: USA
name: Harvard Stem Cell Institute , 1350 Massachusetts Ave, Cambridge, MA 02138, USA
label: 3
institution: Sheffield Institute of Translational Neuroscience, University of Sheffield
country: United Kingdom
name: Sheffield Institute of Translational Neuroscience, University of Sheffield , 385a Glossop Road, Sheffield, S10 2HQ, United Kingdom
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2014
Title: Increased association between Epstein-Barr virus EBNA2 from type 2 strains and the transcriptional repressor BS69 restricts B cell growth
Authors: last_name: Ponnusamy
first_name: Rajesh
name: Rajesh Ponnusamy
affiliations: label: 1
institution: School of Life Sciences, University of Sussex
country: UK
name: School of Life Sciences, University of Sussex , Falmer, Brighton, BN1 9QG, UK
last_name: Khatri
first_name: Ritika
name: Ritika Khatri
affiliations: label: 1
institution: School of Life Sciences, University of Sussex
country: UK
name: School of Life Sciences, University of Sussex , Falmer, Brighton, BN1 9QG, UK
last_name: Correia
first_name: Paulo B.
name: Paulo B. Correia
affiliations: label: 2
institution: Section of Virology, Imperial College London
country: UK
name: Section of Virology, Imperial College London , Norfolk Place, London W2 1PG, UK
orcid: http://orcid.org/0000-0001-9591-7898
last_name: Mancini
first_name: Erika
name: Erika Mancini
affiliations: label: 1
institution: School of Life Sciences, University of Sussex
country: UK
name: School of Life Sciences, University of Sussex , Falmer, Brighton, BN1 9QG, UK
last_name: Farrell
first_name: Paul J.
name: Paul J. Farrell
affiliations: label: 2
institution: Section of Virology, Imperial College London
country: UK
name: Section of Virology, Imperial College London , Norfolk Place, London W2 1PG, UK
orcid: http://orcid.org/0000-0002-9497-9365
last_name: West
first_name: Michelle J.
name: Michelle J. West
corresponding: yes
affiliations: label: 1
institution: School of Life Sciences, University of Sussex
country: UK
name: School of Life Sciences, University of Sussex , Falmer, Brighton, BN1 9QG, UK
Affiliations: label: 1
institution: School of Life Sciences, University of Sussex
country: UK
name: School of Life Sciences, University of Sussex , Falmer, Brighton, BN1 9QG, UK
label: 2
institution: Section of Virology, Imperial College London
country: UK
name: Section of Virology, Imperial College London , Norfolk Place, London W2 1PG, UK
Field: Medicine
Document type: preprint
Year: 2018
Title: Mathematical modeling of navigational decisions based on intensity versus directionality in Drosophila larval phototaxis
Authors: last_name: de Andres-Bragado
first_name: Lucia
name: Lucia de Andres-Bragado
affiliations: label: 1
institution: Department of Biology, University of Fribourg
country: Switzerland
name: Department of Biology, University of Fribourg , Fribourg, Switzerland
last_name: Mazza
first_name: Christian
name: Christian Mazza
corresponding: yes
affiliations: label: 2
institution: Department of Mathematics, University of Fribourg
country: Switzerland
name: Department of Mathematics, University of Fribourg , Fribourg, Switzerland
last_name: Senn
first_name: Walter
name: Walter Senn
corresponding: yes
affiliations: label: 3
institution: Department of Physiology, University of Bern
country: Switzerland
name: Department of Physiology, University of Bern , Bern, Switzerland
last_name: Sprecher
first_name: Simon G.
name: Simon G. Sprecher
corresponding: yes
affiliations: label: 1
institution: Department of Biology, University of Fribourg
country: Switzerland
name: Department of Biology, University of Fribourg , Fribourg, Switzerland
Affiliations: label: 1
institution: Department of Biology, University of Fribourg
country: Switzerland
name: Department of Biology, University of Fribourg , Fribourg, Switzerland
label: 2
institution: Department of Mathematics, University of Fribourg
country: Switzerland
name: Department of Mathematics, University of Fribourg , Fribourg, Switzerland
label: 3
institution: Department of Physiology, University of Bern
country: Switzerland
name: Department of Physiology, University of Bern , Bern, Switzerland
Field: Neuroscience
Document type: preprint
Year: 2018
Title: Comparative transcriptomics of THP-1 monocytes in response to different pathogens
Authors: last_name: Thuer
first_name: Ernst
name: Ernst Thuer
affiliations: label: 1
institution: Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology
country: Spain
name: Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology , Dr. Aiguader 88, Barcelona 08003, Spain
label: 2
institution: Universitat Pompeu Fabra (UPF)
country: Spain
name: Universitat Pompeu Fabra (UPF) . 08003 Barcelona, Spain .
orcid: http://orcid.org/0000-0003-0019-1735
last_name: Gabaldón
first_name: Toni
name: Toni Gabaldón
affiliations: label: 1
institution: Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology
country: Spain
name: Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology , Dr. Aiguader 88, Barcelona 08003, Spain
label: 2
institution: Universitat Pompeu Fabra (UPF)
country: Spain
name: Universitat Pompeu Fabra (UPF) . 08003 Barcelona, Spain .
label: 3
institution: ICREA
country: Spain
name: ICREA , Pg. Lluís Companys 23, 08010 Barcelona, Spain .
Affiliations: label: 1
institution: Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology
country: Spain
name: Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology , Dr. Aiguader 88, Barcelona 08003, Spain
label: 2
institution: Universitat Pompeu Fabra (UPF)
country: Spain
name: Universitat Pompeu Fabra (UPF) . 08003 Barcelona, Spain .
label: 3
institution: ICREA
country: Spain
name: ICREA , Pg. Lluís Companys 23, 08010 Barcelona, Spain .
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: Regrowth-delay Body as a Bacterial Subcellular Structure marking multidrug tolerant Persisters
Authors: last_name: Yu
first_name: Jiayu
name: Jiayu Yu
affiliations: label: 1
institution: The State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University
country: China
name: The State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University , Beijing 100871, P.R. China
notes: J.Y. and Y.L. contributed equally to this work
last_name: Liu
first_name: Yang
name: Yang Liu
affiliations: label: 1
institution: The State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University
country: China
name: The State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University , Beijing 100871, P.R. China
notes: J.Y. and Y.L. contributed equally to this work
last_name: Yin
first_name: Huijia
name: Huijia Yin
affiliations: label: 1
institution: The State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University
country: China
name: The State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University , Beijing 100871, P.R. China
orcid: http://orcid.org/0000-0002-8386-7499
last_name: Chang
first_name: Zengyi
name: Zengyi Chang
corresponding: yes
affiliations: label: 1
institution: The State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University
country: China
name: The State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University , Beijing 100871, P.R. China
label: 2
institution: Center for Protein Science, Peking University
country: China
name: Center for Protein Science, Peking University , Beijing 100871, P.R. China
Affiliations: label: 1
institution: The State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University
country: China
name: The State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University , Beijing 100871, P.R. China
label: 2
institution: Center for Protein Science, Peking University
country: China
name: Center for Protein Science, Peking University , Beijing 100871, P.R. China
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018