Title: EcOH: In silico serotyping of E. coli from short read data
Authors: last_name: Ingle
first_name: Danielle J.
name: Danielle J. Ingle
corresponding: yes
affiliations: label: 1
institution: Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne
country: Australia
name: Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne , Victoria, Australia
label: 2
institution: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne
country: Australia
name: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne , Victoria, Australia
label: 3
institution: Centre for Systems Genomics, The University of Melbourne
country: Australia
name: Centre for Systems Genomics, The University of Melbourne , Victoria, Australia
last_name: Valcanis
first_name: Mary
name: Mary Valcanis
affiliations: label: 4
institution: Microbiological Diagnostic Unit Public Health Laboratory, Peter Doherty Institute for Infection and Immunity, The University of Melbourne
country: Australia
name: Microbiological Diagnostic Unit Public Health Laboratory, Peter Doherty Institute for Infection and Immunity, The University of Melbourne , Victoria, Australia
last_name: Kuzevski
first_name: Alex
name: Alex Kuzevski
affiliations: label: 4
institution: Microbiological Diagnostic Unit Public Health Laboratory, Peter Doherty Institute for Infection and Immunity, The University of Melbourne
country: Australia
name: Microbiological Diagnostic Unit Public Health Laboratory, Peter Doherty Institute for Infection and Immunity, The University of Melbourne , Victoria, Australia
last_name: Tauschek
first_name: Marija
name: Marija Tauschek
affiliations: label: 1
institution: Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne
country: Australia
name: Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne , Victoria, Australia
last_name: Inouye
first_name: Michael
name: Michael Inouye
affiliations: label: 3
institution: Centre for Systems Genomics, The University of Melbourne
country: Australia
name: Centre for Systems Genomics, The University of Melbourne , Victoria, Australia
label: 5
institution: School of BioSciences, The University of Melbourne
country: Australia
name: School of BioSciences, The University of Melbourne , Victoria, Australia
last_name: Stinear
first_name: Tim
name: Tim Stinear
affiliations: label: 1
institution: Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne
country: Australia
name: Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne , Victoria, Australia
last_name: Levine
first_name: Myron M.
name: Myron M. Levine
affiliations: label: 6
institution: Center for Vaccine Development, University of Maryland School of Medicine
country: USA
name: Center for Vaccine Development, University of Maryland School of Medicine , Baltimore, MD, USA
last_name: Robins-Browne
first_name: Roy M.
name: Roy M. Robins-Browne
affiliations: label: 1
institution: Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne
country: Australia
name: Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne , Victoria, Australia
label: 7
institution: Murdoch Childrens Research Institute, Royal Children’s Hospital
country: Victoria
name: Murdoch Childrens Research Institute, Royal Children’s Hospital , Victoria
last_name: Holt
first_name: Kathryn E.
name: Kathryn E. Holt
corresponding: yes
affiliations: label: 2
institution: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne
country: Australia
name: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne , Victoria, Australia
label: 3
institution: Centre for Systems Genomics, The University of Melbourne
country: Australia
name: Centre for Systems Genomics, The University of Melbourne , Victoria, Australia
Affiliations: label: 1
institution: Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne
country: Australia
name: Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne , Victoria, Australia
label: 2
institution: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne
country: Australia
name: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne , Victoria, Australia
label: 3
institution: Centre for Systems Genomics, The University of Melbourne
country: Australia
name: Centre for Systems Genomics, The University of Melbourne , Victoria, Australia
label: 4
institution: Microbiological Diagnostic Unit Public Health Laboratory, Peter Doherty Institute for Infection and Immunity, The University of Melbourne
country: Australia
name: Microbiological Diagnostic Unit Public Health Laboratory, Peter Doherty Institute for Infection and Immunity, The University of Melbourne , Victoria, Australia
label: 5
institution: School of BioSciences, The University of Melbourne
country: Australia
name: School of BioSciences, The University of Melbourne , Victoria, Australia
label: 6
institution: Center for Vaccine Development, University of Maryland School of Medicine
country: USA
name: Center for Vaccine Development, University of Maryland School of Medicine , Baltimore, MD, USA
label: 7
institution: Murdoch Childrens Research Institute, Royal Children’s Hospital
country: Victoria
name: Murdoch Childrens Research Institute, Royal Children’s Hospital , Victoria
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2015