dataesr/affiliations-benchmark huggingface dataset:
Title: Cryo-electron tomography reveals that dynactin recruits a team of dyneins for processive motility
Authors: last_name: Grotjahn
first_name: Danielle A.
name: Danielle A. Grotjahn
affiliations: label: 1
institution: Department of Integrative Structural and Computational Biology, The Scripps Research Institute
name: Department of Integrative Structural and Computational Biology, The Scripps Research Institute , La Jolla CA 92037
notes: Authors contributed equally to this work
orcid: http://orcid.org/0000-0001-8043-5028
last_name: Chowdhury
first_name: Saikat
name: Saikat Chowdhury
affiliations: label: 1
institution: Department of Integrative Structural and Computational Biology, The Scripps Research Institute
name: Department of Integrative Structural and Computational Biology, The Scripps Research Institute , La Jolla CA 92037
notes: Authors contributed equally to this work
last_name: Xu
first_name: Yiru
name: Yiru Xu
affiliations: label: 1
institution: Department of Integrative Structural and Computational Biology, The Scripps Research Institute
name: Department of Integrative Structural and Computational Biology, The Scripps Research Institute , La Jolla CA 92037
orcid: http://orcid.org/0000-0002-8423-0852
last_name: McKenney
first_name: Richard J.
name: Richard J. McKenney
affiliations: label: 2
institution: Department of Molecular and Cellular Biology, University of California-Davis
name: Department of Molecular and Cellular Biology, University of California-Davis , Davis, CA 95616
orcid: http://orcid.org/0000-0002-5065-1835
last_name: Schroer
first_name: Trina A.
name: Trina A. Schroer
affiliations: label: 3
institution: Department of Biology, Johns Hopkins University
name: Department of Biology, Johns Hopkins University , Baltimore, MD 21218
last_name: Lander
first_name: Gabriel C.
name: Gabriel C. Lander
corresponding: yes
affiliations: label: 1
institution: Department of Integrative Structural and Computational Biology, The Scripps Research Institute
name: Department of Integrative Structural and Computational Biology, The Scripps Research Institute , La Jolla CA 92037
Affiliations: label: 1
institution: Department of Integrative Structural and Computational Biology, The Scripps Research Institute
name: Department of Integrative Structural and Computational Biology, The Scripps Research Institute , La Jolla CA 92037
label: 2
institution: Department of Molecular and Cellular Biology, University of California-Davis
name: Department of Molecular and Cellular Biology, University of California-Davis , Davis, CA 95616
label: 3
institution: Department of Biology, Johns Hopkins University
name: Department of Biology, Johns Hopkins University , Baltimore, MD 21218
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: Maternal microRNAs in Drosophila eggs: selection against target sites in maternal protein-coding transcripts
Authors: last_name: Marco
first_name: Antonio
name: Antonio Marco
corresponding: yes
Affiliations: institution: School of Biological Sciences, University of Essex
country: United Kingdom
name: School of Biological Sciences, University of Essex , Colchester, United Kingdom
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2014
Title: Regulation of T cell expansion by antigen presentation dynamics
Authors: orcid: http://orcid.org/0000-0002-6643-7622
last_name: Mayer
first_name: Andreas
name: Andreas Mayer
affiliations: label: 1
institution: Lewis-Sigler Institute for Integrative Genomics, Princeton University
name: Lewis-Sigler Institute for Integrative Genomics, Princeton University
last_name: Zhang
first_name: Yaojun
name: Yaojun Zhang
affiliations: label: 2
institution: Princeton Center for Theoretical Science, Princeton University
name: Princeton Center for Theoretical Science, Princeton University
last_name: Perelson
first_name: Alan S.
name: Alan S. Perelson
affiliations: label: 3
institution: Theoretical Biology and Biophysics, Los Alamos National Laboratory
name: Theoretical Biology and Biophysics, Los Alamos National Laboratory
last_name: Wingreen
first_name: Ned S.
name: Ned S. Wingreen
affiliations: label: 1
institution: Lewis-Sigler Institute for Integrative Genomics, Princeton University
name: Lewis-Sigler Institute for Integrative Genomics, Princeton University
label: 4
institution: Department of Molecular Biology, Princeton University
name: Department of Molecular Biology, Princeton University
Affiliations: label: 1
institution: Lewis-Sigler Institute for Integrative Genomics, Princeton University
name: Lewis-Sigler Institute for Integrative Genomics, Princeton University
label: 2
institution: Princeton Center for Theoretical Science, Princeton University
name: Princeton Center for Theoretical Science, Princeton University
label: 3
institution: Theoretical Biology and Biophysics, Los Alamos National Laboratory
name: Theoretical Biology and Biophysics, Los Alamos National Laboratory
label: 4
institution: Department of Molecular Biology, Princeton University
name: Department of Molecular Biology, Princeton University
Field: Immunology and Microbiology
Document type: preprint
Year: 2018
Title: Correlations, interactions, and predictability in virus-microbe networks
Authors: orcid: http://orcid.org/0000-0001-7377-139X
last_name: Coenen
first_name: Ashley R.
name: Ashley R. Coenen
affiliations: label: 1
institution: School of Physics, Georgia Institute of Technology
country: USA
name: School of Physics, Georgia Institute of Technology , Atlanta, GA, USA
orcid: http://orcid.org/0000-0002-3433-8312
last_name: Weitz
first_name: Joshua S.
name: Joshua S. Weitz
corresponding: yes
affiliations: label: 2
institution: School of Biological Sciences, Georgia Institute of Technology
country: USA
name: School of Biological Sciences, Georgia Institute of Technology , Atlanta, GA, USA
label: 1
institution: School of Physics, Georgia Institute of Technology
country: USA
name: School of Physics, Georgia Institute of Technology , Atlanta, GA, USA
Affiliations: label: 1
institution: School of Physics, Georgia Institute of Technology
country: USA
name: School of Physics, Georgia Institute of Technology , Atlanta, GA, USA
label: 2
institution: School of Biological Sciences, Georgia Institute of Technology
country: USA
name: School of Biological Sciences, Georgia Institute of Technology , Atlanta, GA, USA
Field: Environmental Science
Document type: preprint
Year: 2017
Title: HIF-2α is essential for carotid body development and function
Authors: orcid: http://orcid.org/0000-0002-8676-1964
last_name: Macías
first_name: David
name: David Macías
affiliations: label: 1
institution: Department of Physiology, Development and Neuroscience, University of Cambridge
country: UK
name: Department of Physiology, Development and Neuroscience, University of Cambridge , Cambridge, UK
last_name: Cowburn
first_name: Andrew S.
name: Andrew S. Cowburn
affiliations: label: 1
institution: Department of Physiology, Development and Neuroscience, University of Cambridge
country: UK
name: Department of Physiology, Development and Neuroscience, University of Cambridge , Cambridge, UK
label: 2
institution: Department of Medicine, University of Cambridge
country: UK
name: Department of Medicine, University of Cambridge , Cambridge, UK
last_name: Torres-Torrelo
first_name: Hortensia
name: Hortensia Torres-Torrelo
affiliations: label: 3
institution: Instituto de Biomedicina de Sevilla (IBiS)
country: Spain
name: Instituto de Biomedicina de Sevilla (IBiS) , Seville, Spain .
last_name: Ortega-Sáenz
first_name: Patricia
name: Patricia Ortega-Sáenz
affiliations: label: 3
institution: Instituto de Biomedicina de Sevilla (IBiS)
country: Spain
name: Instituto de Biomedicina de Sevilla (IBiS) , Seville, Spain .
last_name: López-Barneo
first_name: José
name: José López-Barneo
affiliations: label: 3
institution: Instituto de Biomedicina de Sevilla (IBiS)
country: Spain
name: Instituto de Biomedicina de Sevilla (IBiS) , Seville, Spain .
orcid: http://orcid.org/0000-0002-4084-6639
last_name: S. Johnson
first_name: Randall
name: Randall S. Johnson
corresponding: yes
affiliations: label: 1
institution: Department of Physiology, Development and Neuroscience, University of Cambridge
country: UK
name: Department of Physiology, Development and Neuroscience, University of Cambridge , Cambridge, UK
label: 4
institution: Department of Cell and Molecular Biology
country: Sweden
name: Department of Cell and Molecular Biology , Karolinska Institute, Stockholm, Sweden .
Affiliations: label: 1
institution: Department of Physiology, Development and Neuroscience, University of Cambridge
country: UK
name: Department of Physiology, Development and Neuroscience, University of Cambridge , Cambridge, UK
label: 2
institution: Department of Medicine, University of Cambridge
country: UK
name: Department of Medicine, University of Cambridge , Cambridge, UK
label: 3
institution: Instituto de Biomedicina de Sevilla (IBiS)
country: Spain
name: Instituto de Biomedicina de Sevilla (IBiS) , Seville, Spain .
label: 4
institution: Department of Cell and Molecular Biology
country: Sweden
name: Department of Cell and Molecular Biology , Karolinska Institute, Stockholm, Sweden .
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Post-selection Inference Following Aggregate Level Hypothesis Testing in Large Scale Genomic Data
Authors: last_name: Heller
first_name: Ruth
name: Ruth Heller
notes: This work was performed while Ruth Heller was a visiting scholar at the National Cancer Institute.
last_name: Chatterjee
first_name: Nilanjan
name: Nilanjan Chatterjee
last_name: Krieger
first_name: Abba
name: Abba Krieger
last_name: Shi
first_name: Jianxin
name: Jianxin Shi
notes: Study supported by the National Cancer Institute Intramural Research Program.
Affiliations: institution: Department of Statistics and Operations Research, Tel-Aviv university, Tel-Aviv 6997801, Israel, and National Cancer Institute
country: U.S.A.
name: Department of Statistics and Operations Research, Tel-Aviv university, Tel-Aviv 6997801, Israel, and National Cancer Institute , Rockville, MD 20852, U.S.A. , E-mail: ruheller@gmail.com
institution: Department of Biostatistics, Bloomberg School of Public Health, and Department of Oncology, School of Medicine, Johns Hopkins University
country: U.S.A.
name: Department of Biostatistics, Bloomberg School of Public Health, and Department of Oncology, School of Medicine, Johns Hopkins University , Baltimore, MD 21205, U.S.A. , E-mail: nchatte2@jhu.edu
institution: Department of Statistics, University of Pennsylvania
country: U.S.A.
name: Department of Statistics, University of Pennsylvania , Philadelphia, PA 19104, U.S.A. E-mail: krieger@wharton.upenn.edu
institution: National Cancer Institute
country: U.S.A.
name: National Cancer Institute , Rockville, MD 20852, U.S.A. E-mail: jianxins@mail.nih.gov
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2016
Title: Annotation of phenotypes using ontologies: a Gold Standard for the training and evaluation of natural language processing systems
Authors: orcid: http://orcid.org/0000-0003-3162-7490
last_name: Dahdul
first_name: Wasila
name: Wasila Dahdul
affiliations: label: 1
institution: University of South Dakota
name: University of South Dakota
notes: Equal contributions
orcid: http://orcid.org/0000-0002-7162-7770
last_name: Manda
first_name: Prashanti
name: Prashanti Manda
affiliations: label: 2
institution: University of North Carolina at Greensboro
name: University of North Carolina at Greensboro
notes: Equal contributions
last_name: Cui
first_name: Hong
name: Hong Cui
affiliations: label: 3
institution: University of Arizona
name: University of Arizona
orcid: http://orcid.org/0000-0002-8688-6599
last_name: Balhoff
first_name: James P.
name: James P. Balhoff
affiliations: label: 4
institution: University of North Carolina at Chapel Hill
name: University of North Carolina at Chapel Hill
orcid: http://orcid.org/0000-0001-7972-3866
last_name: Dececchi
first_name: T. Alexander
name: T. Alexander Dececchi
affiliations: label: 1
institution: University of South Dakota
name: University of South Dakota
notes: Current Affiliation: University of Pittsburgh at Johnstown
last_name: Ibrahim
first_name: Nizar
name: Nizar Ibrahim
affiliations: label: 5
institution: University of Chicago
name: University of Chicago
notes: Current Affiliation: University of Portsmouth
orcid: http://orcid.org/0000-0001-9107-0714
last_name: Lapp
first_name: Hilmar
name: Hilmar Lapp
affiliations: label: 6
institution: Duke University
name: Duke University
orcid: http://orcid.org/0000-0002-6133-2581
last_name: Vision
first_name: Todd
name: Todd Vision
affiliations: label: 4
institution: University of North Carolina at Chapel Hill
name: University of North Carolina at Chapel Hill
orcid: http://orcid.org/0000-0002-8455-3213
last_name: Mabee
first_name: Paula M.
name: Paula M. Mabee
affiliations: label: 1
institution: University of South Dakota
name: University of South Dakota
Affiliations: label: 1
institution: University of South Dakota
name: University of South Dakota
label: 2
institution: University of North Carolina at Greensboro
name: University of North Carolina at Greensboro
label: 3
institution: University of Arizona
name: University of Arizona
label: 4
institution: University of North Carolina at Chapel Hill
name: University of North Carolina at Chapel Hill
label: 5
institution: University of Chicago
name: University of Chicago
label: 6
institution: Duke University
name: Duke University
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Quantitative Genetic Analysis of the Maize Leaf Microbiome
Authors: orcid: http://orcid.org/0000-0002-8937-6543
last_name: Wallace
first_name: Jason G.
name: Jason G. Wallace
affiliations: label: 1
institution: Department of Crop & Soil Sciences, University of Georgia
country: USA
name: Department of Crop & Soil Sciences, University of Georgia , Athens, Georgia, USA
last_name: Kremling
first_name: Karl A.
name: Karl A. Kremling
affiliations: label: 2
institution: Department of Plant Breeding and Genetics, Cornell University
country: USA
name: Department of Plant Breeding and Genetics, Cornell University , Ithaca, New York, USA
orcid: http://orcid.org/0000-0002-3100-371X
last_name: Buckler
first_name: Edward S.
name: Edward S. Buckler
affiliations: label: 3
institution: United States Department of Agriculture – Agricultural Research Service
country: USA
name: United States Department of Agriculture – Agricultural Research Service , Ithaca, New York, USA
label: 4
institution: Institute for Genomic Diversity, Cornell University
country: USA
name: Institute for Genomic Diversity, Cornell University , Ithaca, New York, USA
Affiliations: label: 1
institution: Department of Crop & Soil Sciences, University of Georgia
country: USA
name: Department of Crop & Soil Sciences, University of Georgia , Athens, Georgia, USA
label: 2
institution: Department of Plant Breeding and Genetics, Cornell University
country: USA
name: Department of Plant Breeding and Genetics, Cornell University , Ithaca, New York, USA
label: 3
institution: United States Department of Agriculture – Agricultural Research Service
country: USA
name: United States Department of Agriculture – Agricultural Research Service , Ithaca, New York, USA
label: 4
institution: Institute for Genomic Diversity, Cornell University
country: USA
name: Institute for Genomic Diversity, Cornell University , Ithaca, New York, USA
Field: Agricultural and Biological Sciences
Document type: preprint
Year: 2018
Title: Correlating enzyme annotations with a large set of microbial growth temperatures reveals metabolic adaptations to growth at diverse temperatures
Authors: orcid: http://orcid.org/0000-0003-2174-2225
last_name: Engqvist
first_name: Martin KM
name: Martin KM Engqvist
corresponding: yes
affiliations: label: 1
institution: Department of Biology and Biological Engineering, Chalmers University of Technology
country: Sweden
name: Department of Biology and Biological Engineering, Chalmers University of Technology , SE-412 96 Gothenburg, Sweden .
Affiliations: label: 1
institution: Department of Biology and Biological Engineering, Chalmers University of Technology
country: Sweden
name: Department of Biology and Biological Engineering, Chalmers University of Technology , SE-412 96 Gothenburg, Sweden .
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Non-canonical secondary structures arising from non-B-DNA motifs are determinants of mutagenesis
Authors: last_name: Georgakopoulos-Soares
first_name: Ilias
name: Ilias Georgakopoulos-Soares
affiliations: label: 1
institution: Wellcome Trust Sanger Institute
country: UK
name: Wellcome Trust Sanger Institute , Wellcome Genome Campus, Hinxton CB 10 ISA, UK .
last_name: Morganella
first_name: Sandro
name: Sandro Morganella
affiliations: label: 1
institution: Wellcome Trust Sanger Institute
country: UK
name: Wellcome Trust Sanger Institute , Wellcome Genome Campus, Hinxton CB 10 ISA, UK .
last_name: Jain
first_name: Naman
name: Naman Jain
affiliations: label: 2
institution: Department of Life Sciences, Imperial College London
country: UK
name: Department of Life Sciences, Imperial College London , London SW7 2AZ, UK .
last_name: Hemberg
first_name: Martin
name: Martin Hemberg
corresponding: yes
affiliations: label: 1
institution: Wellcome Trust Sanger Institute
country: UK
name: Wellcome Trust Sanger Institute , Wellcome Genome Campus, Hinxton CB 10 ISA, UK .
last_name: Nik-Zainal
first_name: Serena
name: Serena Nik-Zainal
corresponding: yes
affiliations: label: 1
institution: Wellcome Trust Sanger Institute
country: UK
name: Wellcome Trust Sanger Institute , Wellcome Genome Campus, Hinxton CB 10 ISA, UK .
label: 3
institution: East Anglian Medical Genetics Service, Cambridge University Hospitals NHS Foundation Trust
country: UK
name: East Anglian Medical Genetics Service, Cambridge University Hospitals NHS Foundation Trust , Cambridge CB2 2QQ, UK .
Affiliations: label: 1
institution: Wellcome Trust Sanger Institute
country: UK
name: Wellcome Trust Sanger Institute , Wellcome Genome Campus, Hinxton CB 10 ISA, UK .
label: 2
institution: Department of Life Sciences, Imperial College London
country: UK
name: Department of Life Sciences, Imperial College London , London SW7 2AZ, UK .
label: 3
institution: East Anglian Medical Genetics Service, Cambridge University Hospitals NHS Foundation Trust
country: UK
name: East Anglian Medical Genetics Service, Cambridge University Hospitals NHS Foundation Trust , Cambridge CB2 2QQ, UK .
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: Uncertain role of nutrient availability on forest carbon balance
Authors: last_name: Du
first_name: Enzai
name: Enzai Du
Affiliations: institution: State Key Laboratory of Earth Surface Processes and Resource Ecology, and College of Resources Science & Technology, Beijing Normal University
country: China
name: State Key Laboratory of Earth Surface Processes and Resource Ecology, and College of Resources Science & Technology, Beijing Normal University , Xinjiekouwai Street 19#, Beijing 100875, China . Email: enzaidu@bnu.edu.cn
Field: Environmental Science
Document type: preprint
Year: 2014
Title: T-SNE visualization of large-scale neural recordings
Authors: last_name: Dimitriadis
first_name: George
name: George Dimitriadis
corresponding: yes
affiliations: label: 1
institution: Sainsbury Wellcome Centre, UCL
country: UK
name: Sainsbury Wellcome Centre, UCL , London, UK
last_name: Neto
first_name: Joana
name: Joana Neto
affiliations: label: 1
institution: Sainsbury Wellcome Centre, UCL
country: UK
name: Sainsbury Wellcome Centre, UCL , London, UK
last_name: Kampff
first_name: Adam R.
name: Adam R. Kampff
affiliations: label: 1
institution: Sainsbury Wellcome Centre, UCL
country: UK
name: Sainsbury Wellcome Centre, UCL , London, UK
Affiliations: label: 1
institution: Sainsbury Wellcome Centre, UCL
country: UK
name: Sainsbury Wellcome Centre, UCL , London, UK
Field: Neuroscience
Document type: preprint
Year: 2016
Title: A meta-analysis of Entamoeba histolytica/dispar in Iraq
Authors: orcid: http://orcid.org/0000-0003-3637-1316
last_name: Chalabi
first_name: Khder Niazi
name: Khder Niazi Chalabi
corresponding: yes
Affiliations: institution: Department of Biology, College of Education, Salahaddin University-Erbil
country: Iraq
name: Department of Biology, College of Education, Salahaddin University-Erbil , Erbil, Iraq
Field: Medicine
Document type: preprint
Year: 2018
Title: Regulation of the Unfolded Protein Response by BiP AMPylation protects photoreceptors from light-dependent degeneration
Authors: last_name: Moehlman
first_name: Andrew T.
name: Andrew T. Moehlman
affiliations: label: 1
institution: Department of Neuroscience, UT Southwestern Medical Center
name: Department of Neuroscience, UT Southwestern Medical Center , Dallas, TX.
last_name: Casey
first_name: Amanda K.
name: Amanda K. Casey
affiliations: label: 2
institution: Department of Molecular Biology UT Southwestern Medical Center
name: Department of Molecular Biology UT Southwestern Medical Center , Dallas, TX.
last_name: Servage
first_name: Kelly
name: Kelly Servage
affiliations: label: 2
institution: Department of Molecular Biology UT Southwestern Medical Center
name: Department of Molecular Biology UT Southwestern Medical Center , Dallas, TX.
label: 3
institution: Department of Biochemistry, UT Southwestern Medical Center, Dallas, TX and Howard Hughes Medical Institute
name: Department of Biochemistry, UT Southwestern Medical Center, Dallas, TX and Howard Hughes Medical Institute , Dallas, TX.
orcid: http://orcid.org/0000-0002-0678-7620
last_name: Orth
first_name: Kim
name: Kim Orth
corresponding: yes
affiliations: label: 2
institution: Department of Molecular Biology UT Southwestern Medical Center
name: Department of Molecular Biology UT Southwestern Medical Center , Dallas, TX.
label: 3
institution: Department of Biochemistry, UT Southwestern Medical Center, Dallas, TX and Howard Hughes Medical Institute
name: Department of Biochemistry, UT Southwestern Medical Center, Dallas, TX and Howard Hughes Medical Institute , Dallas, TX.
orcid: http://orcid.org/0000-0002-1167-2676
last_name: Krämer
first_name: Helmut
name: Helmut Krämer
corresponding: yes
affiliations: label: 1
institution: Department of Neuroscience, UT Southwestern Medical Center
name: Department of Neuroscience, UT Southwestern Medical Center , Dallas, TX.
label: 4
institution: Department of Cell Biology, UT Southwestern Medical Center
name: Department of Cell Biology, UT Southwestern Medical Center , Dallas, TX.
Affiliations: label: 1
institution: Department of Neuroscience, UT Southwestern Medical Center
name: Department of Neuroscience, UT Southwestern Medical Center , Dallas, TX.
label: 2
institution: Department of Molecular Biology UT Southwestern Medical Center
name: Department of Molecular Biology UT Southwestern Medical Center , Dallas, TX.
label: 3
institution: Department of Biochemistry, UT Southwestern Medical Center, Dallas, TX and Howard Hughes Medical Institute
name: Department of Biochemistry, UT Southwestern Medical Center, Dallas, TX and Howard Hughes Medical Institute , Dallas, TX.
label: 4
institution: Department of Cell Biology, UT Southwestern Medical Center
name: Department of Cell Biology, UT Southwestern Medical Center , Dallas, TX.
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018