Title: Cis-Compound Mutations are Prevalent in Triple Negative Breast Cancer and Can Drive Tumor Progression
Authors: last_name: Hiranuma
first_name: Nao
name: Nao Hiranuma
affiliations: label: 1
institution: Computer Science and Engineering, University of Washington
name: Computer Science and Engineering, University of Washington , Seattle, WA
last_name: Liu
first_name: Jie
name: Jie Liu
affiliations: label: 2
institution: Department of Genome Sciences, University of Washington
name: Department of Genome Sciences, University of Washington , Seattle, WA
last_name: Song
first_name: Chaozhong
name: Chaozhong Song
affiliations: label: 3
institution: Center for Cancer Innovation, University of Washington
name: Center for Cancer Innovation, University of Washington , Seattle, WA
label: 4
institution: Institute for Stem Cell and Regenerative Medicine, University of Washington
name: Institute for Stem Cell and Regenerative Medicine, University of Washington , Seattle, WA
label: 5
institution: Department of Medicine/Hematology, University of Washington
name: Department of Medicine/Hematology, University of Washington , Seattle, WA
last_name: Goldsmith
first_name: Jacob
name: Jacob Goldsmith
affiliations: label: 5
institution: Department of Medicine/Hematology, University of Washington
name: Department of Medicine/Hematology, University of Washington , Seattle, WA
last_name: Dorschner
first_name: Michael O.
name: Michael O. Dorschner
affiliations: label: 3
institution: Center for Cancer Innovation, University of Washington
name: Center for Cancer Innovation, University of Washington , Seattle, WA
label: 6
institution: Department of Pathology University of Washington
name: Department of Pathology University of Washington , Seattle, WA
last_name: Pritchard
first_name: Colin C.
name: Colin C. Pritchard
affiliations: label: 3
institution: Center for Cancer Innovation, University of Washington
name: Center for Cancer Innovation, University of Washington , Seattle, WA
label: 7
institution: Department of Laboratory Medicine, University of Washington
name: Department of Laboratory Medicine, University of Washington , Seattle, WA
last_name: Burton
first_name: Kimberly A.
name: Kimberly A. Burton
affiliations: label: 3
institution: Center for Cancer Innovation, University of Washington
name: Center for Cancer Innovation, University of Washington , Seattle, WA
label: 4
institution: Institute for Stem Cell and Regenerative Medicine, University of Washington
name: Institute for Stem Cell and Regenerative Medicine, University of Washington , Seattle, WA
label: 5
institution: Department of Medicine/Hematology, University of Washington
name: Department of Medicine/Hematology, University of Washington , Seattle, WA
last_name: Mahen
first_name: Elisabeth M.
name: Elisabeth M. Mahen
affiliations: label: 3
institution: Center for Cancer Innovation, University of Washington
name: Center for Cancer Innovation, University of Washington , Seattle, WA
label: 4
institution: Institute for Stem Cell and Regenerative Medicine, University of Washington
name: Institute for Stem Cell and Regenerative Medicine, University of Washington , Seattle, WA
label: 5
institution: Department of Medicine/Hematology, University of Washington
name: Department of Medicine/Hematology, University of Washington , Seattle, WA
last_name: Blau
first_name: Sibel
name: Sibel Blau
affiliations: label: 3
institution: Center for Cancer Innovation, University of Washington
name: Center for Cancer Innovation, University of Washington , Seattle, WA
label: 8
institution: Northwest Medical Specialties, Puyallup and Tacoma
name: Northwest Medical Specialties, Puyallup and Tacoma , WA
last_name: Senecal
first_name: Francis M.
name: Francis M. Senecal
affiliations: label: 3
institution: Center for Cancer Innovation, University of Washington
name: Center for Cancer Innovation, University of Washington , Seattle, WA
label: 8
institution: Northwest Medical Specialties, Puyallup and Tacoma
name: Northwest Medical Specialties, Puyallup and Tacoma , WA
last_name: Monsky
first_name: Wayne L.
name: Wayne L. Monsky
affiliations: label: 9
institution: Department of Radiology, University of Washington
name: Department of Radiology, University of Washington , Seattle, WA
last_name: Parker
first_name: Stephanie
name: Stephanie Parker
affiliations: label: 8
institution: Northwest Medical Specialties, Puyallup and Tacoma
name: Northwest Medical Specialties, Puyallup and Tacoma , WA
last_name: Schmechel
first_name: Stephen C.
name: Stephen C. Schmechel
affiliations: label: 3
institution: Center for Cancer Innovation, University of Washington
name: Center for Cancer Innovation, University of Washington , Seattle, WA
label: 6
institution: Department of Pathology University of Washington
name: Department of Pathology University of Washington , Seattle, WA
last_name: Allison
first_name: Stephen K.
name: Stephen K. Allison
affiliations: label: 9
institution: Department of Radiology, University of Washington
name: Department of Radiology, University of Washington , Seattle, WA
last_name: Gadi
first_name: Vijayakrishna K.
name: Vijayakrishna K. Gadi
affiliations: label: 10
institution: Department of Medicine/Oncology, University of Washington
name: 10 Department of Medicine/Oncology, University of Washington , Seattle, WA
label: 11
institution: Seattle Cancer Care Alliance
name: 11 Seattle Cancer Care Alliance , Seattle, WA
last_name: Salama
first_name: Sophie R.
name: Sophie R. Salama
affiliations: label: 12
institution: University of California at Santa Cruz
name: 12 University of California at Santa Cruz , Santa Cruz, CA
last_name: Radenbaugh
first_name: Amie J.
name: Amie J. Radenbaugh
affiliations: label: 12
institution: University of California at Santa Cruz
name: 12 University of California at Santa Cruz , Santa Cruz, CA
last_name: Goldman
first_name: Mary
name: Mary Goldman
affiliations: label: 12
institution: University of California at Santa Cruz
name: 12 University of California at Santa Cruz , Santa Cruz, CA
last_name: Johnsen
first_name: Jill M.
name: Jill M. Johnsen
affiliations: label: 13
institution: Bloodworks Northwest
name: 13 Bloodworks Northwest , Seattle, WA
last_name: Heimfeld
first_name: Shelly
name: Shelly Heimfeld
affiliations: label: 14
institution: Fred Hutchinson Cancer Research Center Seattle
name: 14 Fred Hutchinson Cancer Research Center Seattle , WA
last_name: Komashko
first_name: Vitalina
name: Vitalina Komashko
affiliations: label: 15
institution: Trialomics LLC Seattle
name: 15 Trialomics LLC Seattle , WA
last_name: LaMadrid-Hermannsfeldt
first_name: Marissa
name: Marissa LaMadrid-Hermannsfeldt
affiliations: label: 5
institution: Department of Medicine/Hematology, University of Washington
name: Department of Medicine/Hematology, University of Washington , Seattle, WA
last_name: Duan
first_name: Zhijun
name: Zhijun Duan
affiliations: label: 3
institution: Center for Cancer Innovation, University of Washington
name: Center for Cancer Innovation, University of Washington , Seattle, WA
label: 4
institution: Institute for Stem Cell and Regenerative Medicine, University of Washington
name: Institute for Stem Cell and Regenerative Medicine, University of Washington , Seattle, WA
label: 5
institution: Department of Medicine/Hematology, University of Washington
name: Department of Medicine/Hematology, University of Washington , Seattle, WA
last_name: Benz
first_name: Steven C.
name: Steven C. Benz
affiliations: label: 16
institution: Nantomics Inc.
name: 16 Nantomics Inc. , Culver City, CA
last_name: Soon-Shiong
first_name: Patrick
name: Patrick Soon-Shiong
affiliations: label: 16
institution: Nantomics Inc.
name: 16 Nantomics Inc. , Culver City, CA
last_name: Haussler
first_name: David
name: David Haussler
affiliations: label: 12
institution: University of California at Santa Cruz
name: 12 University of California at Santa Cruz , Santa Cruz, CA
last_name: Zhu
first_name: Jingchun
name: Jingchun Zhu
affiliations: label: 3
institution: Center for Cancer Innovation, University of Washington
name: Center for Cancer Innovation, University of Washington , Seattle, WA
label: 12
institution: University of California at Santa Cruz
name: 12 University of California at Santa Cruz , Santa Cruz, CA
last_name: Ruzzo
first_name: Walter L.
name: Walter L. Ruzzo
affiliations: label: 1
institution: Computer Science and Engineering, University of Washington
name: Computer Science and Engineering, University of Washington , Seattle, WA
label: 2
institution: Department of Genome Sciences, University of Washington
name: Department of Genome Sciences, University of Washington , Seattle, WA
label: 3
institution: Center for Cancer Innovation, University of Washington
name: Center for Cancer Innovation, University of Washington , Seattle, WA
last_name: Noble
first_name: William S.
name: William S. Noble
affiliations: label: 1
institution: Computer Science and Engineering, University of Washington
name: Computer Science and Engineering, University of Washington , Seattle, WA
label: 2
institution: Department of Genome Sciences, University of Washington
name: Department of Genome Sciences, University of Washington , Seattle, WA
label: 3
institution: Center for Cancer Innovation, University of Washington
name: Center for Cancer Innovation, University of Washington , Seattle, WA
last_name: Blau
first_name: C. Anthony
name: C. Anthony Blau
corresponding: yes
affiliations: label: 2
institution: Department of Genome Sciences, University of Washington
name: Department of Genome Sciences, University of Washington , Seattle, WA
label: 3
institution: Center for Cancer Innovation, University of Washington
name: Center for Cancer Innovation, University of Washington , Seattle, WA
label: 4
institution: Institute for Stem Cell and Regenerative Medicine, University of Washington
name: Institute for Stem Cell and Regenerative Medicine, University of Washington , Seattle, WA
label: 5
institution: Department of Medicine/Hematology, University of Washington
name: Department of Medicine/Hematology, University of Washington , Seattle, WA
Affiliations: label: 1
institution: Computer Science and Engineering, University of Washington
name: Computer Science and Engineering, University of Washington , Seattle, WA
label: 2
institution: Department of Genome Sciences, University of Washington
name: Department of Genome Sciences, University of Washington , Seattle, WA
label: 3
institution: Center for Cancer Innovation, University of Washington
name: Center for Cancer Innovation, University of Washington , Seattle, WA
label: 4
institution: Institute for Stem Cell and Regenerative Medicine, University of Washington
name: Institute for Stem Cell and Regenerative Medicine, University of Washington , Seattle, WA
label: 5
institution: Department of Medicine/Hematology, University of Washington
name: Department of Medicine/Hematology, University of Washington , Seattle, WA
label: 6
institution: Department of Pathology University of Washington
name: Department of Pathology University of Washington , Seattle, WA
label: 7
institution: Department of Laboratory Medicine, University of Washington
name: Department of Laboratory Medicine, University of Washington , Seattle, WA
label: 8
institution: Northwest Medical Specialties, Puyallup and Tacoma
name: Northwest Medical Specialties, Puyallup and Tacoma , WA
label: 9
institution: Department of Radiology, University of Washington
name: Department of Radiology, University of Washington , Seattle, WA
label: 10
institution: Department of Medicine/Oncology, University of Washington
name: 10 Department of Medicine/Oncology, University of Washington , Seattle, WA
label: 11
institution: Seattle Cancer Care Alliance
name: 11 Seattle Cancer Care Alliance , Seattle, WA
label: 12
institution: University of California at Santa Cruz
name: 12 University of California at Santa Cruz , Santa Cruz, CA
label: 13
institution: Bloodworks Northwest
name: 13 Bloodworks Northwest , Seattle, WA
label: 14
institution: Fred Hutchinson Cancer Research Center Seattle
name: 14 Fred Hutchinson Cancer Research Center Seattle , WA
label: 15
institution: Trialomics LLC Seattle
name: 15 Trialomics LLC Seattle , WA
label: 16
institution: Nantomics Inc.
name: 16 Nantomics Inc. , Culver City, CA
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2016