dataesr/affiliations-benchmark huggingface dataset:
Title: The day/night difference in the circadian clock’s response to acute lipopolysaccharide and the rhythmic Stat3 expression in the rat suprachiasmatic nucleus
Authors: last_name: Moravcová
first_name: Simona
name: Simona Moravcová
affiliations: label: 1
institution: Faculty of Science, Charles University
country: Czech Republic
name: Faculty of Science, Charles University Viničná 7; Prague 2; 128 43; Czech Republic
label: 2
institution: National Institute of Mental Health
country: Czech Republic
name: National Institute of Mental Health Topolová 748; Klecany; 250 67; Czech Republic
last_name: Pačesová
first_name: Dominika
name: Dominika Pačesová
affiliations: label: 1
institution: Faculty of Science, Charles University
country: Czech Republic
name: Faculty of Science, Charles University Viničná 7; Prague 2; 128 43; Czech Republic
label: 2
institution: National Institute of Mental Health
country: Czech Republic
name: National Institute of Mental Health Topolová 748; Klecany; 250 67; Czech Republic
last_name: Melkes
first_name: Barbora
name: Barbora Melkes
affiliations: label: 1
institution: Faculty of Science, Charles University
country: Czech Republic
name: Faculty of Science, Charles University Viničná 7; Prague 2; 128 43; Czech Republic
last_name: Kyclerová
first_name: Hana
name: Hana Kyclerová
affiliations: label: 1
institution: Faculty of Science, Charles University
country: Czech Republic
name: Faculty of Science, Charles University Viničná 7; Prague 2; 128 43; Czech Republic
last_name: Spišská
first_name: Veronika
name: Veronika Spišská
affiliations: label: 1
institution: Faculty of Science, Charles University
country: Czech Republic
name: Faculty of Science, Charles University Viničná 7; Prague 2; 128 43; Czech Republic
last_name: Novotný
first_name: Jiří
name: Jiří Novotný
affiliations: label: 1
institution: Faculty of Science, Charles University
country: Czech Republic
name: Faculty of Science, Charles University Viničná 7; Prague 2; 128 43; Czech Republic
orcid: http://orcid.org/0000-0002-2693-2143
last_name: Bendová
first_name: Zdeňka
name: Zdeňka Bendová
corresponding: yes
affiliations: label: 1
institution: Faculty of Science, Charles University
country: Czech Republic
name: Faculty of Science, Charles University Viničná 7; Prague 2; 128 43; Czech Republic
label: 2
institution: National Institute of Mental Health
country: Czech Republic
name: National Institute of Mental Health Topolová 748; Klecany; 250 67; Czech Republic
Affiliations: label: 1
institution: Faculty of Science, Charles University
country: Czech Republic
name: Faculty of Science, Charles University Viničná 7; Prague 2; 128 43; Czech Republic
label: 2
institution: National Institute of Mental Health
country: Czech Republic
name: National Institute of Mental Health Topolová 748; Klecany; 250 67; Czech Republic
Field: Neuroscience
Document type: preprint
Year: 2018
Title: What exactly is ‘ N ’ in cell culture and animal experiments?
Authors: last_name: Lazic
first_name: Stanley E.
name: Stanley E. Lazic
corresponding: yes
affiliations: label: 1
institution: Quantitative Biology, Discovery Sciences
country: UK
name: Quantitative Biology, Discovery Sciences , AstraZeneca, Cambridge, CB4 0WG, UK
last_name: Clarke-Williams
first_name: Charlie J.
name: Charlie J. Clarke-Williams
affiliations: label: 2
institution: School of Physiology, Pharmacology and Neuroscience, University of Bristol, Biomedical Sciences Building, University Walk
country: UK
name: School of Physiology, Pharmacology and Neuroscience, University of Bristol, Biomedical Sciences Building, University Walk , Bristol, BS8 1TD, UK
last_name: Munafò
first_name: Marcus R.
name: Marcus R. Munafò
affiliations: label: 3
institution: MRC Integrative Epidemiology Unit, School of Experimental Psychology, University of Bristol
country: UK
name: MRC Integrative Epidemiology Unit, School of Experimental Psychology, University of Bristol , 12a Priory Road, Bristol, BS8 1TU, UK
Affiliations: label: 1
institution: Quantitative Biology, Discovery Sciences
country: UK
name: Quantitative Biology, Discovery Sciences , AstraZeneca, Cambridge, CB4 0WG, UK
label: 2
institution: School of Physiology, Pharmacology and Neuroscience, University of Bristol, Biomedical Sciences Building, University Walk
country: UK
name: School of Physiology, Pharmacology and Neuroscience, University of Bristol, Biomedical Sciences Building, University Walk , Bristol, BS8 1TD, UK
label: 3
institution: MRC Integrative Epidemiology Unit, School of Experimental Psychology, University of Bristol
country: UK
name: MRC Integrative Epidemiology Unit, School of Experimental Psychology, University of Bristol , 12a Priory Road, Bristol, BS8 1TU, UK
Field: Veterinary
Document type: preprint
Year: 2017
Title: A Graph Extension of the Positional Burrows-Wheeler Transform and its Applications
Authors: orcid: http://orcid.org/0000-0001-5828-047X
last_name: Novak
first_name: Adam M.
name: Adam M. Novak
affiliations: label: 1
institution: Genomics Institute, University of California Santa Cruz
country: USA
name: Genomics Institute, University of California Santa Cruz , Santa Cruz, CA 95064, USA
last_name: Garrison
first_name: Erik
name: Erik Garrison
affiliations: label: 2
institution: Wellcome Trust Sanger Institute
country: UK
name: Wellcome Trust Sanger Institute , Cambridge, UK
last_name: Paten
first_name: Benedict
name: Benedict Paten
affiliations: label: 1
institution: Genomics Institute, University of California Santa Cruz
country: USA
name: Genomics Institute, University of California Santa Cruz , Santa Cruz, CA 95064, USA
Affiliations: label: 1
institution: Genomics Institute, University of California Santa Cruz
country: USA
name: Genomics Institute, University of California Santa Cruz , Santa Cruz, CA 95064, USA
label: 2
institution: Wellcome Trust Sanger Institute
country: UK
name: Wellcome Trust Sanger Institute , Cambridge, UK
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2016
Title: Transposon silencing in the Drosophila female germline ensures genome stability in progeny embryos
Authors: last_name: Durdevic
first_name: Zeljko
name: Zeljko Durdevic
affiliations: label: 1
institution: Developmental Biology Unit, European Molecular Biology Laboratory
country: Germany
name: Developmental Biology Unit, European Molecular Biology Laboratory , Meyerhofstrasse 1, Heidelberg, D-69117, Germany
last_name: Pillai
first_name: Ramesh S.
name: Ramesh S. Pillai
affiliations: label: 2
institution: Department of Molecular Biology, University of Geneva
country: Switzerland
name: Department of Molecular Biology, University of Geneva , 30, quai Ernest-Ansermet, Geneva 4, CH-1211, Switzerland
orcid: http://orcid.org/0000-0002-5061-4620
last_name: Ephrussi
first_name: Anne
name: Anne Ephrussi
affiliations: label: 1
institution: Developmental Biology Unit, European Molecular Biology Laboratory
country: Germany
name: Developmental Biology Unit, European Molecular Biology Laboratory , Meyerhofstrasse 1, Heidelberg, D-69117, Germany
Affiliations: label: 1
institution: Developmental Biology Unit, European Molecular Biology Laboratory
country: Germany
name: Developmental Biology Unit, European Molecular Biology Laboratory , Meyerhofstrasse 1, Heidelberg, D-69117, Germany
label: 2
institution: Department of Molecular Biology, University of Geneva
country: Switzerland
name: Department of Molecular Biology, University of Geneva , 30, quai Ernest-Ansermet, Geneva 4, CH-1211, Switzerland
Field: Agricultural and Biological Sciences
Document type: preprint
Year: 2018
Title: Combined analysis of genome sequencing and RNA-motifs reveals novel damaging non-coding mutations in human tumors
Authors: orcid: http://orcid.org/0000-0002-7989-9084
last_name: Singh
first_name: Babita
name: Babita Singh
affiliations: label: 1
institution: Pompeu Fabra University (UPF)
country: Spain
name: Pompeu Fabra University (UPF) , E08003 Barcelona, Spain .
orcid: http://orcid.org/0000-0001-5363-3774
last_name: Trincado
first_name: Juan L.
name: Juan L. Trincado
affiliations: label: 1
institution: Pompeu Fabra University (UPF)
country: Spain
name: Pompeu Fabra University (UPF) , E08003 Barcelona, Spain .
last_name: Tatlow
first_name: PJ
name: PJ Tatlow
affiliations: label: 2
institution: Department of Biology, Brigham Young University
country: USA
name: Department of Biology, Brigham Young University , Provo, Utah, USA
last_name: Piccolo
first_name: Stephen R.
name: Stephen R. Piccolo
affiliations: label: 2
institution: Department of Biology, Brigham Young University
country: USA
name: Department of Biology, Brigham Young University , Provo, Utah, USA
label: 3
institution: Department of Biomedical Informatics, University of Utah
country: USA
name: Department of Biomedical Informatics, University of Utah , Salt Lake City, Utah, USA
orcid: http://orcid.org/0000-0003-0793-6218
last_name: Eyras
first_name: Eduardo
name: Eduardo Eyras
corresponding: yes
affiliations: label: 1
institution: Pompeu Fabra University (UPF)
country: Spain
name: Pompeu Fabra University (UPF) , E08003 Barcelona, Spain .
label: 4
institution: Catalan Institution for Research and Advanced Studies (ICREA)
country: Spain
name: Catalan Institution for Research and Advanced Studies (ICREA) . E08010 Barcelona, Spain
Affiliations: label: 1
institution: Pompeu Fabra University (UPF)
country: Spain
name: Pompeu Fabra University (UPF) , E08003 Barcelona, Spain .
label: 2
institution: Department of Biology, Brigham Young University
country: USA
name: Department of Biology, Brigham Young University , Provo, Utah, USA
label: 3
institution: Department of Biomedical Informatics, University of Utah
country: USA
name: Department of Biomedical Informatics, University of Utah , Salt Lake City, Utah, USA
label: 4
institution: Catalan Institution for Research and Advanced Studies (ICREA)
country: Spain
name: Catalan Institution for Research and Advanced Studies (ICREA) . E08010 Barcelona, Spain
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: Cell-accurate optical mapping across the entire developing heart
Authors: last_name: Weber
first_name: Michael
name: Michael Weber
corresponding: yes
affiliations: label: 1
institution: Max Planck Institute of Molecular Cell Biology and Genetics
country: Germany
name: Max Planck Institute of Molecular Cell Biology and Genetics , 01307 Dresden, Germany
label: 2
institution: Harvard Medical School
country: USA
name: Harvard Medical School , Boston, MA 02115, USA
last_name: Scherf
first_name: Nico
name: Nico Scherf
corresponding: yes
affiliations: label: 1
institution: Max Planck Institute of Molecular Cell Biology and Genetics
country: Germany
name: Max Planck Institute of Molecular Cell Biology and Genetics , 01307 Dresden, Germany
label: 3
institution: Max Planck Institute for Human Cognitive and Brain Sciences
country: Germany
name: Max Planck Institute for Human Cognitive and Brain Sciences , 04103 Leipzig, Germany
last_name: Kohl
first_name: Peter
name: Peter Kohl
affiliations: label: 4
institution: Institute for Experimental Cardiovascular Medicine, University Heart Centre Freiburg Bad Krozingen, School of Medicine, Albert-Ludwigs University
country: Germany
name: Institute for Experimental Cardiovascular Medicine, University Heart Centre Freiburg Bad Krozingen, School of Medicine, Albert-Ludwigs University , 79110 Freiburg, Germany
orcid: http://orcid.org/0000-0001-7250-3756
last_name: Huisken
first_name: Jan
name: Jan Huisken
affiliations: label: 1
institution: Max Planck Institute of Molecular Cell Biology and Genetics
country: Germany
name: Max Planck Institute of Molecular Cell Biology and Genetics , 01307 Dresden, Germany
label: 5
institution: Morgridge Institute for Research
country: USA
name: Morgridge Institute for Research , Madison, WI 53715, USA
Affiliations: label: 1
institution: Max Planck Institute of Molecular Cell Biology and Genetics
country: Germany
name: Max Planck Institute of Molecular Cell Biology and Genetics , 01307 Dresden, Germany
label: 2
institution: Harvard Medical School
country: USA
name: Harvard Medical School , Boston, MA 02115, USA
label: 3
institution: Max Planck Institute for Human Cognitive and Brain Sciences
country: Germany
name: Max Planck Institute for Human Cognitive and Brain Sciences , 04103 Leipzig, Germany
label: 4
institution: Institute for Experimental Cardiovascular Medicine, University Heart Centre Freiburg Bad Krozingen, School of Medicine, Albert-Ludwigs University
country: Germany
name: Institute for Experimental Cardiovascular Medicine, University Heart Centre Freiburg Bad Krozingen, School of Medicine, Albert-Ludwigs University , 79110 Freiburg, Germany
label: 5
institution: Morgridge Institute for Research
country: USA
name: Morgridge Institute for Research , Madison, WI 53715, USA
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: Cell morphological motif detector for high-resolution 3D microscopy images
Authors: last_name: Driscoll
first_name: Meghan K.
name: Meghan K. Driscoll
affiliations: label: 1
institution: Departments of Bioinformatics and Cell Biology, UT Southwestern Medical Center
name: Departments of Bioinformatics and Cell Biology, UT Southwestern Medical Center , Dallas, TX
last_name: Welf
first_name: Erik S.
name: Erik S. Welf
affiliations: label: 1
institution: Departments of Bioinformatics and Cell Biology, UT Southwestern Medical Center
name: Departments of Bioinformatics and Cell Biology, UT Southwestern Medical Center , Dallas, TX
last_name: Dean
first_name: Kevin M.
name: Kevin M. Dean
affiliations: label: 1
institution: Departments of Bioinformatics and Cell Biology, UT Southwestern Medical Center
name: Departments of Bioinformatics and Cell Biology, UT Southwestern Medical Center , Dallas, TX
last_name: Fiolka
first_name: Reto
name: Reto Fiolka
affiliations: label: 1
institution: Departments of Bioinformatics and Cell Biology, UT Southwestern Medical Center
name: Departments of Bioinformatics and Cell Biology, UT Southwestern Medical Center , Dallas, TX
last_name: Danuser
first_name: Gaudenz
name: Gaudenz Danuser
affiliations: label: 1
institution: Departments of Bioinformatics and Cell Biology, UT Southwestern Medical Center
name: Departments of Bioinformatics and Cell Biology, UT Southwestern Medical Center , Dallas, TX
Affiliations: label: 1
institution: Departments of Bioinformatics and Cell Biology, UT Southwestern Medical Center
name: Departments of Bioinformatics and Cell Biology, UT Southwestern Medical Center , Dallas, TX
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Social feedback and the emergence of rank in animal society
Authors: last_name: Hobson
first_name: Elizabeth A.
name: Elizabeth A. Hobson
corresponding: yes
affiliations: label: 1
institution: National Institute for Mathematical and Biological Synthesis, Knoxville, TN, USA; Department of Biology, New Mexico State University
country: USA
name: National Institute for Mathematical and Biological Synthesis, Knoxville, TN, USA; Department of Biology, New Mexico State University , Las Cruces, NM, USA ; email: ehobson@nimbios.org
last_name: DeDeo
first_name: Simon
name: Simon DeDeo
affiliations: label: 2
institution: School of Informatics and Computing, Indiana University, 901 E 10th Street, Bloomington, IN 47408, USA & Santa Fe Institute
country: USA
name: School of Informatics and Computing, Indiana University, 901 E 10th Street, Bloomington, IN 47408, USA & Santa Fe Institute , 1399 Hyde Park Road, Santa Fe, NM 87501 USA ; email: sdedeo@indiana.edu
notes: School of Informatics and Computing, Indiana University, 901 E 10th Street, Bloomington, IN 47408, USA & Santa Fe Institute, 1399 Hyde Park Road, Santa Fe, NM 87501, USA; sdedeo@indiana.edu.
Affiliations: label: 1
institution: National Institute for Mathematical and Biological Synthesis, Knoxville, TN, USA; Department of Biology, New Mexico State University
country: USA
name: National Institute for Mathematical and Biological Synthesis, Knoxville, TN, USA; Department of Biology, New Mexico State University , Las Cruces, NM, USA ; email: ehobson@nimbios.org
label: 2
institution: School of Informatics and Computing, Indiana University, 901 E 10th Street, Bloomington, IN 47408, USA & Santa Fe Institute
country: USA
name: School of Informatics and Computing, Indiana University, 901 E 10th Street, Bloomington, IN 47408, USA & Santa Fe Institute , 1399 Hyde Park Road, Santa Fe, NM 87501 USA ; email: sdedeo@indiana.edu
Field: Veterinary
Document type: preprint
Year: 2015
Title: Selection of trait-specific markers and multi-environment models improve genomic predictive ability in rice
Authors: last_name: Bhandari
first_name: Aditi
name: Aditi Bhandari
affiliations: label: 1
institution: International Rice Research Institute
name: International Rice Research Institute , Los Banos, Philippines
label: 2
institution: Banasthali University
country: India
name: Banasthali University , Banasthali Vidyapith, India
last_name: Bartholomé
first_name: Jérôme
name: Jérôme Bartholomé
affiliations: label: 3
institution: CIRAD
country: France
name: CIRAD , UMR AGAP, F-34398, Montpellier, France
label: 4
institution: AGAP
country: France
name: AGAP , Univ Montpellier, CIRAD, INRA, Montpellier SupAgro, Montpellier, France
last_name: Cao
first_name: Tuong-Vi
name: Tuong-Vi Cao
affiliations: label: 3
institution: CIRAD
country: France
name: CIRAD , UMR AGAP, F-34398, Montpellier, France
label: 4
institution: AGAP
country: France
name: AGAP , Univ Montpellier, CIRAD, INRA, Montpellier SupAgro, Montpellier, France
last_name: Kumari
first_name: Nilima
name: Nilima Kumari
affiliations: label: 2
institution: Banasthali University
country: India
name: Banasthali University , Banasthali Vidyapith, India
last_name: frouin
first_name: Julien
name: Julien frouin
affiliations: label: 1
institution: International Rice Research Institute
name: International Rice Research Institute , Los Banos, Philippines
last_name: Kumar
first_name: Arvind
name: Arvind Kumar
affiliations: label: 1
institution: International Rice Research Institute
name: International Rice Research Institute , Los Banos, Philippines
orcid: http://orcid.org/0000-0003-0072-6285
last_name: Ahmadi
first_name: Nourollah
name: Nourollah Ahmadi
corresponding: yes
affiliations: label: 3
institution: CIRAD
country: France
name: CIRAD , UMR AGAP, F-34398, Montpellier, France
label: 4
institution: AGAP
country: France
name: AGAP , Univ Montpellier, CIRAD, INRA, Montpellier SupAgro, Montpellier, France
Affiliations: label: 1
institution: International Rice Research Institute
name: International Rice Research Institute , Los Banos, Philippines
label: 2
institution: Banasthali University
country: India
name: Banasthali University , Banasthali Vidyapith, India
label: 3
institution: CIRAD
country: France
name: CIRAD , UMR AGAP, F-34398, Montpellier, France
label: 4
institution: AGAP
country: France
name: AGAP , Univ Montpellier, CIRAD, INRA, Montpellier SupAgro, Montpellier, France
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Absence of general rules governing molluscan body-size response to climatic fluctuation during Cenozoic
Authors: orcid: http://orcid.org/0000-0002-9102-9313
last_name: Chattopadhyay
first_name: Debarati
name: Debarati Chattopadhyay
affiliations: label: 1
institution: Department of Earth Sciences, Indian Institute of Science Education and Research (IISER)
name: Department of Earth Sciences, Indian Institute of Science Education and Research (IISER) , Kolkata
last_name: Chattopadhyay
first_name: Devapriya
name: Devapriya Chattopadhyay
corresponding: yes
affiliations: label: 1
institution: Department of Earth Sciences, Indian Institute of Science Education and Research (IISER)
name: Department of Earth Sciences, Indian Institute of Science Education and Research (IISER) , Kolkata
Affiliations: label: 1
institution: Department of Earth Sciences, Indian Institute of Science Education and Research (IISER)
name: Department of Earth Sciences, Indian Institute of Science Education and Research (IISER) , Kolkata
Field: Environmental Science
Document type: preprint
Year: 2018
Title: The role of evolutionary selection in the dynamics of protein structure evolution
Authors: orcid: http://orcid.org/0000-0003-2046-3603
last_name: Gilson
first_name: Amy I.
name: Amy I. Gilson
affiliations: label: 1
institution: Department of Chemistry and Chemical Biology, Harvard University
country: USA
name: Department of Chemistry and Chemical Biology, Harvard University , 12 Oxford St., Cambridge MA, USA
last_name: Marshall-Christensen
first_name: Ahmee
name: Ahmee Marshall-Christensen
affiliations: label: 1
institution: Department of Chemistry and Chemical Biology, Harvard University
country: USA
name: Department of Chemistry and Chemical Biology, Harvard University , 12 Oxford St., Cambridge MA, USA
orcid: http://orcid.org/0000-0003-2656-4851
last_name: Choi
first_name: Jeong-Mo
name: Jeong-Mo Choi
affiliations: label: 1
institution: Department of Chemistry and Chemical Biology, Harvard University
country: USA
name: Department of Chemistry and Chemical Biology, Harvard University , 12 Oxford St., Cambridge MA, USA
orcid: http://orcid.org/0000-0002-4769-2265
last_name: Shakhnovich
first_name: Eugene I.
name: Eugene I. Shakhnovich
corresponding: yes
affiliations: label: 1
institution: Department of Chemistry and Chemical Biology, Harvard University
country: USA
name: Department of Chemistry and Chemical Biology, Harvard University , 12 Oxford St., Cambridge MA, USA
Affiliations: label: 1
institution: Department of Chemistry and Chemical Biology, Harvard University
country: USA
name: Department of Chemistry and Chemical Biology, Harvard University , 12 Oxford St., Cambridge MA, USA
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2016
Title: A mosaic of independent innovations involving eyes shut are critical for the evolutionary transition from closed to open rhabdoms
Authors: orcid: http://orcid.org/0000-0001-5378-3190
last_name: Mahato
first_name: Simpla
name: Simpla Mahato
affiliations: label: 1
institution: Department of Biology, Indiana University, Bloomington
country: USA
name: Department of Biology, Indiana University, Bloomington , IN 47405, USA
last_name: Nie
first_name: Jing
name: Jing Nie
affiliations: label: 1
institution: Department of Biology, Indiana University, Bloomington
country: USA
name: Department of Biology, Indiana University, Bloomington , IN 47405, USA
notes: Current Address: Department of Otolaryngology-Head and Neck Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, USA
orcid: http://orcid.org/0000-0002-6255-7117
last_name: Plachetzki
first_name: David C.
name: David C. Plachetzki
corresponding: yes
affiliations: label: 2
institution: Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham
country: USA
name: Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham , NH 03824, USA
orcid: http://orcid.org/0000-0001-7085-822X
last_name: Zelhof
first_name: Andrew C.
name: Andrew C. Zelhof
corresponding: yes
affiliations: label: 1
institution: Department of Biology, Indiana University, Bloomington
country: USA
name: Department of Biology, Indiana University, Bloomington , IN 47405, USA
Affiliations: label: 1
institution: Department of Biology, Indiana University, Bloomington
country: USA
name: Department of Biology, Indiana University, Bloomington , IN 47405, USA
label: 2
institution: Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham
country: USA
name: Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham , NH 03824, USA
Field: Neuroscience
Document type: preprint
Year: 2018