Title: Integrated culturing, modeling and transcriptomics uncovers complex interactions and emergent behavior in a synthetic gut community
Authors: last_name: D’hoe
first_name: Kevin
name: Kevin D’hoe
affiliations: label: 1
institution: Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute
country: Belgium
name: Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute , KU Leuven, Leuven, Belgium .
label: 2
institution: Jeroen Raes Lab, VIB KU Leuven Center for Microbiology
country: Belgium
name: Jeroen Raes Lab, VIB KU Leuven Center for Microbiology , Leuven, Belgium .
label: 3
institution: Research Group of Microbiology, Department of Bioengineering Sciences, Vrije Universiteit Brussel (VUB)
country: Belgium
name: Research Group of Microbiology, Department of Bioengineering Sciences, Vrije Universiteit Brussel (VUB) , Brussels, Belgium .
label: 7
institution: Research Group of Industrial Microbiology and Food Biotechnology, Faculty of Sciences and Bioengineering Sciences, Vrije Universiteit Brussel (VUB)
country: Belgium
name: Research Group of Industrial Microbiology and Food Biotechnology, Faculty of Sciences and Bioengineering Sciences, Vrije Universiteit Brussel (VUB) , Brussels, Belgium .
notes: Authors contributed equally as first and last authors, respectively
last_name: Vet
first_name: Stefan
name: Stefan Vet
affiliations: label: 4
institution: Applied Physics Research Group, Vrije Universiteit Brussel (VUB)
country: Belgium
name: Applied Physics Research Group, Vrije Universiteit Brussel (VUB) , Brussels, Belgium .
label: 5
institution: Unité de Chronobiologie Théorique, Université Libre de Bruxelles (ULB)
country: Belgium
name: Unité de Chronobiologie Théorique, Université Libre de Bruxelles (ULB) , Brussels, Belgium .
label: 6
institution: Interuniversity Institute of Bioinformatics in Brussels (IB2)
country: Belgium
name: Interuniversity Institute of Bioinformatics in Brussels (IB2) , VUB-ULB, Brussels, Belgium .
notes: Authors contributed equally as first and last authors, respectively
orcid: http://orcid.org/0000-0001-7129-2803
last_name: Faust
first_name: Karoline
name: Karoline Faust
corresponding: yes
affiliations: label: 1
institution: Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute
country: Belgium
name: Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute , KU Leuven, Leuven, Belgium .
notes: Authors contributed equally as first and last authors, respectively
last_name: Moens
first_name: Frédéric
name: Frédéric Moens
affiliations: label: 7
institution: Research Group of Industrial Microbiology and Food Biotechnology, Faculty of Sciences and Bioengineering Sciences, Vrije Universiteit Brussel (VUB)
country: Belgium
name: Research Group of Industrial Microbiology and Food Biotechnology, Faculty of Sciences and Bioengineering Sciences, Vrije Universiteit Brussel (VUB) , Brussels, Belgium .
last_name: Falony
first_name: Gwen
name: Gwen Falony
affiliations: label: 1
institution: Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute
country: Belgium
name: Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute , KU Leuven, Leuven, Belgium .
label: 2
institution: Jeroen Raes Lab, VIB KU Leuven Center for Microbiology
country: Belgium
name: Jeroen Raes Lab, VIB KU Leuven Center for Microbiology , Leuven, Belgium .
last_name: Gonze
first_name: Didier
name: Didier Gonze
affiliations: label: 5
institution: Unité de Chronobiologie Théorique, Université Libre de Bruxelles (ULB)
country: Belgium
name: Unité de Chronobiologie Théorique, Université Libre de Bruxelles (ULB) , Brussels, Belgium .
label: 6
institution: Interuniversity Institute of Bioinformatics in Brussels (IB2)
country: Belgium
name: Interuniversity Institute of Bioinformatics in Brussels (IB2) , VUB-ULB, Brussels, Belgium .
last_name: Lloréns-Rico
first_name: Verónica
name: Verónica Lloréns-Rico
affiliations: label: 1
institution: Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute
country: Belgium
name: Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute , KU Leuven, Leuven, Belgium .
label: 2
institution: Jeroen Raes Lab, VIB KU Leuven Center for Microbiology
country: Belgium
name: Jeroen Raes Lab, VIB KU Leuven Center for Microbiology , Leuven, Belgium .
last_name: Gelens
first_name: Lendert
name: Lendert Gelens
affiliations: label: 8
institution: Laboratory of Dynamics in Biological Systems
country: Belgium
name: Laboratory of Dynamics in Biological Systems , KU Leuven, Leuven, Belgium .
last_name: Danckaert
first_name: Jan
name: Jan Danckaert
affiliations: label: 4
institution: Applied Physics Research Group, Vrije Universiteit Brussel (VUB)
country: Belgium
name: Applied Physics Research Group, Vrije Universiteit Brussel (VUB) , Brussels, Belgium .
last_name: Vuyst
first_name: Luc De
name: Luc De Vuyst
affiliations: label: 7
institution: Research Group of Industrial Microbiology and Food Biotechnology, Faculty of Sciences and Bioengineering Sciences, Vrije Universiteit Brussel (VUB)
country: Belgium
name: Research Group of Industrial Microbiology and Food Biotechnology, Faculty of Sciences and Bioengineering Sciences, Vrije Universiteit Brussel (VUB) , Brussels, Belgium .
notes: Authors contributed equally as first and last authors, respectively
last_name: Raes
first_name: Jeroen
name: Jeroen Raes
corresponding: yes
affiliations: label: 1
institution: Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute
country: Belgium
name: Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute , KU Leuven, Leuven, Belgium .
label: 2
institution: Jeroen Raes Lab, VIB KU Leuven Center for Microbiology
country: Belgium
name: Jeroen Raes Lab, VIB KU Leuven Center for Microbiology , Leuven, Belgium .
label: 3
institution: Research Group of Microbiology, Department of Bioengineering Sciences, Vrije Universiteit Brussel (VUB)
country: Belgium
name: Research Group of Microbiology, Department of Bioengineering Sciences, Vrije Universiteit Brussel (VUB) , Brussels, Belgium .
notes: Authors contributed equally as first and last authors, respectively
Affiliations: label: 1
institution: Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute
country: Belgium
name: Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute , KU Leuven, Leuven, Belgium .
label: 2
institution: Jeroen Raes Lab, VIB KU Leuven Center for Microbiology
country: Belgium
name: Jeroen Raes Lab, VIB KU Leuven Center for Microbiology , Leuven, Belgium .
label: 3
institution: Research Group of Microbiology, Department of Bioengineering Sciences, Vrije Universiteit Brussel (VUB)
country: Belgium
name: Research Group of Microbiology, Department of Bioengineering Sciences, Vrije Universiteit Brussel (VUB) , Brussels, Belgium .
label: 4
institution: Applied Physics Research Group, Vrije Universiteit Brussel (VUB)
country: Belgium
name: Applied Physics Research Group, Vrije Universiteit Brussel (VUB) , Brussels, Belgium .
label: 5
institution: Unité de Chronobiologie Théorique, Université Libre de Bruxelles (ULB)
country: Belgium
name: Unité de Chronobiologie Théorique, Université Libre de Bruxelles (ULB) , Brussels, Belgium .
label: 6
institution: Interuniversity Institute of Bioinformatics in Brussels (IB2)
country: Belgium
name: Interuniversity Institute of Bioinformatics in Brussels (IB2) , VUB-ULB, Brussels, Belgium .
label: 7
institution: Research Group of Industrial Microbiology and Food Biotechnology, Faculty of Sciences and Bioengineering Sciences, Vrije Universiteit Brussel (VUB)
country: Belgium
name: Research Group of Industrial Microbiology and Food Biotechnology, Faculty of Sciences and Bioengineering Sciences, Vrije Universiteit Brussel (VUB) , Brussels, Belgium .
label: 8
institution: Laboratory of Dynamics in Biological Systems
country: Belgium
name: Laboratory of Dynamics in Biological Systems , KU Leuven, Leuven, Belgium .
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018