Title: Choice of reference genome can introduce massive bias in bisulfite sequencing data
Authors: last_name: Wulfridge
first_name: Phillip
name: Phillip Wulfridge
affiliations: label: 1
institution: Center for Epigenetics, Johns Hopkins School of Medicine
name: Center for Epigenetics, Johns Hopkins School of Medicine
orcid: http://orcid.org/0000-0003-2437-1976
last_name: Langmead
first_name: Ben
name: Ben Langmead
affiliations: label: 2
institution: Center for Computational Biology, Johns Hopkins University
name: Center for Computational Biology, Johns Hopkins University
label: 3
institution: Department of Computer Science, Johns Hopkins University
name: Department of Computer Science, Johns Hopkins University
last_name: Feinberg
first_name: Andrew P.
name: Andrew P. Feinberg
affiliations: label: 1
institution: Center for Epigenetics, Johns Hopkins School of Medicine
name: Center for Epigenetics, Johns Hopkins School of Medicine
label: 4
institution: Department of Medicine, Johns Hopkins School of Medicine
name: Department of Medicine, Johns Hopkins School of Medicine
label: 5
institution: Department of Biomedical Engineering, Whiting School of Engineering
name: Department of Biomedical Engineering, Whiting School of Engineering
label: 6
institution: Department of Mental Health, Johns Hopkins Bloomberg School of Public Health
name: Department of Mental Health, Johns Hopkins Bloomberg School of Public Health
orcid: http://orcid.org/0000-0003-0086-0687
last_name: Hansen
first_name: Kasper D.
name: Kasper D. Hansen
corresponding: yes
affiliations: label: 1
institution: Center for Epigenetics, Johns Hopkins School of Medicine
name: Center for Epigenetics, Johns Hopkins School of Medicine
label: 2
institution: Center for Computational Biology, Johns Hopkins University
name: Center for Computational Biology, Johns Hopkins University
label: 7
institution: Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health
name: Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health
label: 8
institution: McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins School of Medicine
name: McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins School of Medicine
Affiliations: label: 1
institution: Center for Epigenetics, Johns Hopkins School of Medicine
name: Center for Epigenetics, Johns Hopkins School of Medicine
label: 2
institution: Center for Computational Biology, Johns Hopkins University
name: Center for Computational Biology, Johns Hopkins University
label: 3
institution: Department of Computer Science, Johns Hopkins University
name: Department of Computer Science, Johns Hopkins University
label: 4
institution: Department of Medicine, Johns Hopkins School of Medicine
name: Department of Medicine, Johns Hopkins School of Medicine
label: 5
institution: Department of Biomedical Engineering, Whiting School of Engineering
name: Department of Biomedical Engineering, Whiting School of Engineering
label: 6
institution: Department of Mental Health, Johns Hopkins Bloomberg School of Public Health
name: Department of Mental Health, Johns Hopkins Bloomberg School of Public Health
label: 7
institution: Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health
name: Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health
label: 8
institution: McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins School of Medicine
name: McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins School of Medicine
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2016