dataesr/affiliations-benchmark huggingface dataset:
Title: Associations of coffee genetic risk scores with coffee, tea and other beverages in the UK Biobank
Authors: last_name: Taylor
first_name: Amy E.
name: Amy E. Taylor
corresponding: yes
affiliations: label: 1
institution: UK Centre for Tobacco and Alcohol Studies, School of Experimental Psychology, University of Bristol
country: UK
name: UK Centre for Tobacco and Alcohol Studies, School of Experimental Psychology, University of Bristol , UK
label: 2
institution: MRC Integrative Epidemiology Unit (IEU) at the University of Bristol
country: UK
name: MRC Integrative Epidemiology Unit (IEU) at the University of Bristol , UK
last_name: Munafò
first_name: Marcus R.
name: Marcus R. Munafò
affiliations: label: 1
institution: UK Centre for Tobacco and Alcohol Studies, School of Experimental Psychology, University of Bristol
country: UK
name: UK Centre for Tobacco and Alcohol Studies, School of Experimental Psychology, University of Bristol , UK
label: 2
institution: MRC Integrative Epidemiology Unit (IEU) at the University of Bristol
country: UK
name: MRC Integrative Epidemiology Unit (IEU) at the University of Bristol , UK
Affiliations: label: 1
institution: UK Centre for Tobacco and Alcohol Studies, School of Experimental Psychology, University of Bristol
country: UK
name: UK Centre for Tobacco and Alcohol Studies, School of Experimental Psychology, University of Bristol , UK
label: 2
institution: MRC Integrative Epidemiology Unit (IEU) at the University of Bristol
country: UK
name: MRC Integrative Epidemiology Unit (IEU) at the University of Bristol , UK
Field: Medicine
Document type: preprint
Year: 2016
Title: A statistical definition for reproducibility and replicability
Authors: last_name: Patil
first_name: Prasad
name: Prasad Patil
last_name: Peng
first_name: Roger D.
name: Roger D. Peng
last_name: Leek
first_name: Jeffrey T.
name: Jeffrey T. Leek
Field: Decision Sciences
Document type: preprint
Year: 2016
Title: NLR signaling network mediates immunity to diverse plant pathogens
Authors: last_name: Wu
first_name: Chih-Hang
name: Chih-Hang Wu
affiliations: label: 1
institution: The Sainsbury Laboratory
country: United Kingdom
name: The Sainsbury Laboratory , Norwich Research Park, Norwich, United Kingdom .
last_name: Abd-El-Haliem
first_name: Ahmed
name: Ahmed Abd-El-Haliem
affiliations: label: 2
institution: Plant Breeding, Wageningen University and Research
country: The Netherlands
name: Plant Breeding, Wageningen University and Research , Wageningen, The Netherlands .
last_name: Bozkurt
first_name: Tolga O.
name: Tolga O. Bozkurt
affiliations: label: 1
institution: The Sainsbury Laboratory
country: United Kingdom
name: The Sainsbury Laboratory , Norwich Research Park, Norwich, United Kingdom .
label: 3
institution: Department of Life Sciences, Imperial College London
country: United Kingdom
name: Department of Life Sciences, Imperial College London , London, United Kingdom .
last_name: Belhaj
first_name: Khaoula
name: Khaoula Belhaj
affiliations: label: 1
institution: The Sainsbury Laboratory
country: United Kingdom
name: The Sainsbury Laboratory , Norwich Research Park, Norwich, United Kingdom .
last_name: Terauchi
first_name: Ryohei
name: Ryohei Terauchi
affiliations: label: 4
institution: Iwate Biotechnology Research Center
country: Japan
name: Iwate Biotechnology Research Center , Iwate, Japan .
label: 5
institution: Kyoto University
country: Japan
name: Kyoto University , Kyoto, Japan
last_name: Vossen
first_name: Jack H.
name: Jack H. Vossen
affiliations: label: 2
institution: Plant Breeding, Wageningen University and Research
country: The Netherlands
name: Plant Breeding, Wageningen University and Research , Wageningen, The Netherlands .
orcid: http://orcid.org/0000-0002-0290-0315
last_name: Kamoun
first_name: Sophien
name: Sophien Kamoun
corresponding: yes
affiliations: label: 1
institution: The Sainsbury Laboratory
country: United Kingdom
name: The Sainsbury Laboratory , Norwich Research Park, Norwich, United Kingdom .
Affiliations: label: 1
institution: The Sainsbury Laboratory
country: United Kingdom
name: The Sainsbury Laboratory , Norwich Research Park, Norwich, United Kingdom .
label: 2
institution: Plant Breeding, Wageningen University and Research
country: The Netherlands
name: Plant Breeding, Wageningen University and Research , Wageningen, The Netherlands .
label: 3
institution: Department of Life Sciences, Imperial College London
country: United Kingdom
name: Department of Life Sciences, Imperial College London , London, United Kingdom .
label: 4
institution: Iwate Biotechnology Research Center
country: Japan
name: Iwate Biotechnology Research Center , Iwate, Japan .
label: 5
institution: Kyoto University
country: Japan
name: Kyoto University , Kyoto, Japan
Field: Agricultural and Biological Sciences
Document type: preprint
Year: 2016
Title: Ten simple rules for managing high-throughput nucleotide sequencing data
Authors: orcid: http://orcid.org/0000-0002-8228-5374
last_name: Vos
first_name: Rutger A.
name: Rutger A. Vos
Affiliations: institution: Naturalis Biodiversity Center
country: The Netherlands
name: Naturalis Biodiversity Center , Leiden, The Netherlands
Field: Decision Sciences
Document type: preprint
Year: 2016
Title: Reannotation of the ribonucleotide reductase in a cyanophage reveals life history strategies within the virioplankton
Authors: last_name: Harrison
first_name: Amelia O.
name: Amelia O. Harrison
affiliations: label: 1
institution: School of Marine Science and Policy, University of Delaware
country: USA
name: School of Marine Science and Policy, University of Delaware , Newark, DE, USA
orcid: http://orcid.org/0000-0003-3337-8184
last_name: Moore
first_name: Ryan M.
name: Ryan M. Moore
affiliations: label: 2
institution: Center for Bioinformatics and Computational Biology, University of Delaware
country: USA
name: Center for Bioinformatics and Computational Biology, University of Delaware , Newark, DE, USA
last_name: Polson
first_name: Shawn W.
name: Shawn W. Polson
affiliations: label: 2
institution: Center for Bioinformatics and Computational Biology, University of Delaware
country: USA
name: Center for Bioinformatics and Computational Biology, University of Delaware , Newark, DE, USA
last_name: Wommack
first_name: K. Eric
name: K. Eric Wommack
corresponding: yes
affiliations: label: 1
institution: School of Marine Science and Policy, University of Delaware
country: USA
name: School of Marine Science and Policy, University of Delaware , Newark, DE, USA
Affiliations: label: 1
institution: School of Marine Science and Policy, University of Delaware
country: USA
name: School of Marine Science and Policy, University of Delaware , Newark, DE, USA
label: 2
institution: Center for Bioinformatics and Computational Biology, University of Delaware
country: USA
name: Center for Bioinformatics and Computational Biology, University of Delaware , Newark, DE, USA
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: The Effects of Normalization, Transformation, and Rarefaction on Clustering of OTU Abundance
Authors: last_name: Molik
first_name: David
name: David Molik
affiliations: label: 1
institution: Department of Biology, University of Notre Dame
country: United States of America
name: Department of Biology, University of Notre Dame , Notre Dame, United States of America , dmolik@nd.edu
last_name: Pfrender
first_name: Michael
name: Michael Pfrender
affiliations: label: 2
institution: Department of Biology, University of Notre Dame
country: United States of America
name: Department of Biology, University of Notre Dame , Notre Dame, United States of America , mpfrende@nd.edu
last_name: Emrich
first_name: Scott
name: Scott Emrich
affiliations: label: 3
institution: Department of Electrical Engineering and Computer Science, The University of Tennessee Knoxville
country: United States of America
name: Department of Electrical Engineering and Computer Science, The University of Tennessee Knoxville , Knoxville, United States of America , semrich@nd.edu
Affiliations: label: 1
institution: Department of Biology, University of Notre Dame
country: United States of America
name: Department of Biology, University of Notre Dame , Notre Dame, United States of America , dmolik@nd.edu
label: 2
institution: Department of Biology, University of Notre Dame
country: United States of America
name: Department of Biology, University of Notre Dame , Notre Dame, United States of America , mpfrende@nd.edu
label: 3
institution: Department of Electrical Engineering and Computer Science, The University of Tennessee Knoxville
country: United States of America
name: Department of Electrical Engineering and Computer Science, The University of Tennessee Knoxville , Knoxville, United States of America , semrich@nd.edu
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Genome-wide characterization of PRE-1 reveals a hidden evolutionary relationship between suidae and primates
Authors: last_name: Yu
first_name: Hao
name: Hao Yu
affiliations: label: 1
institution: College of Animal Science, Jilin University
country: China
name: College of Animal Science, Jilin University , Changchun 130062, China
last_name: Wu
first_name: Qingyan
name: Qingyan Wu
affiliations: label: 1
institution: College of Animal Science, Jilin University
country: China
name: College of Animal Science, Jilin University , Changchun 130062, China
last_name: Zhang
first_name: Jing
name: Jing Zhang
affiliations: label: 1
institution: College of Animal Science, Jilin University
country: China
name: College of Animal Science, Jilin University , Changchun 130062, China
last_name: Zhang
first_name: Ying
name: Ying Zhang
affiliations: label: 1
institution: College of Animal Science, Jilin University
country: China
name: College of Animal Science, Jilin University , Changchun 130062, China
last_name: Lu
first_name: Chao
name: Chao Lu
affiliations: label: 1
institution: College of Animal Science, Jilin University
country: China
name: College of Animal Science, Jilin University , Changchun 130062, China
last_name: Cheng
first_name: Yunyun
name: Yunyun Cheng
affiliations: label: 1
institution: College of Animal Science, Jilin University
country: China
name: College of Animal Science, Jilin University , Changchun 130062, China
last_name: Zhao
first_name: Zhihui
name: Zhihui Zhao
affiliations: label: 1
institution: College of Animal Science, Jilin University
country: China
name: College of Animal Science, Jilin University , Changchun 130062, China
last_name: Windemuth
first_name: Andreas
name: Andreas Windemuth
corresponding: yes
affiliations: label: 3
institution: Abcam, Firefly BioWorks Inc
name: Abcam, Firefly BioWorks Inc , United States
last_name: Liu
first_name: Di
name: Di Liu
corresponding: yes
affiliations: label: 2
institution: Heilongjiang Academy of Agricultural Sciences
country: China
name: Heilongjiang Academy of Agricultural Sciences , Harbin 150086, China
last_name: Hao
first_name: Linlin
name: Linlin Hao
corresponding: yes
affiliations: label: 1
institution: College of Animal Science, Jilin University
country: China
name: College of Animal Science, Jilin University , Changchun 130062, China
Affiliations: label: 1
institution: College of Animal Science, Jilin University
country: China
name: College of Animal Science, Jilin University , Changchun 130062, China
label: 2
institution: Heilongjiang Academy of Agricultural Sciences
country: China
name: Heilongjiang Academy of Agricultural Sciences , Harbin 150086, China
label: 3
institution: Abcam, Firefly BioWorks Inc
name: Abcam, Firefly BioWorks Inc , United States
Field: Agricultural and Biological Sciences
Document type: preprint
Year: 2015
Title: Exploiting general independence criteria for network inference
Authors: last_name: Verbyla
first_name: Petras
name: Petras Verbyla
corresponding: yes
last_name: Desgranges
first_name: Nina
name: Nina Desgranges
orcid: http://orcid.org/0000-0003-1998-492X
last_name: Richardson
first_name: Sylvia
name: Sylvia Richardson
orcid: http://orcid.org/0000-0003-3113-7942
last_name: Wernisch
first_name: Lorenz
name: Lorenz Wernisch
Affiliations: institution: MRC Biostatistics Unit, Cambridge Biomedical Campus, Cambridge Institute of Public Health, Forvie Site, Robinson Way
country: UK
name: MRC Biostatistics Unit, Cambridge Biomedical Campus, Cambridge Institute of Public Health, Forvie Site, Robinson Way , Cambridge CB2 0SR, UK
Field: Computer Science
Document type: preprint
Year: 2017
Title: Hi-C detects novel structural variants in HL-60 and HL-60/S4 cell lines
Authors: orcid: http://orcid.org/0000-0002-6094-5490
last_name: Jacobson
first_name: Elsie C.
name: Elsie C. Jacobson
affiliations: label: 1
institution: Liggins Institute, University of Auckland
country: New Zealand
name: Liggins Institute, University of Auckland , Auckland, New Zealand
last_name: Grand
first_name: Ralph S.
name: Ralph S. Grand
affiliations: label: 1
institution: Liggins Institute, University of Auckland
country: New Zealand
name: Liggins Institute, University of Auckland , Auckland, New Zealand
label: 2
institution: Friedrich Miescher Institute for Biomedical Research
name: Friedrich Miescher Institute for Biomedical Research
orcid: http://orcid.org/0000-0002-4418-947X
last_name: Perry
first_name: Jo K.
name: Jo K. Perry
affiliations: label: 1
institution: Liggins Institute, University of Auckland
country: New Zealand
name: Liggins Institute, University of Auckland , Auckland, New Zealand
orcid: http://orcid.org/0000-0003-4876-9356
last_name: Vickers
first_name: Mark H.
name: Mark H. Vickers
affiliations: label: 1
institution: Liggins Institute, University of Auckland
country: New Zealand
name: Liggins Institute, University of Auckland , Auckland, New Zealand
last_name: Olins
first_name: Ada L.
name: Ada L. Olins
affiliations: label: 3
institution: University of New England
country: USA
name: University of New England , Portland, ME, USA
last_name: Olins
first_name: Donald E.
name: Donald E. Olins
affiliations: label: 3
institution: University of New England
country: USA
name: University of New England , Portland, ME, USA
orcid: http://orcid.org/0000-0003-2927-450X
last_name: O’Sullivan
first_name: Justin M.
name: Justin M. O’Sullivan
affiliations: label: 1
institution: Liggins Institute, University of Auckland
country: New Zealand
name: Liggins Institute, University of Auckland , Auckland, New Zealand
Affiliations: label: 1
institution: Liggins Institute, University of Auckland
country: New Zealand
name: Liggins Institute, University of Auckland , Auckland, New Zealand
label: 2
institution: Friedrich Miescher Institute for Biomedical Research
name: Friedrich Miescher Institute for Biomedical Research
label: 3
institution: University of New England
country: USA
name: University of New England , Portland, ME, USA
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Preexisting heterogeneities in gene dosage sensitivity shaped sex chromosome evolution in mammals and birds
Authors: last_name: Naqvi
first_name: Sahin
name: Sahin Naqvi
affiliations: label: 1
institution: Whitehead Institute
name: Whitehead Institute , Cambridge MA 02142
label: 2
institution: Department of Biology, Massachusetts Institute of Technology
name: Department of Biology, Massachusetts Institute of Technology , Cambridge MA 02139
last_name: Bellott
first_name: Daniel W.
name: Daniel W. Bellott
affiliations: label: 1
institution: Whitehead Institute
name: Whitehead Institute , Cambridge MA 02142
orcid: http://orcid.org/0000-0001-9920-3411
last_name: Page
first_name: David C.
name: David C. Page
affiliations: label: 1
institution: Whitehead Institute
name: Whitehead Institute , Cambridge MA 02142
label: 2
institution: Department of Biology, Massachusetts Institute of Technology
name: Department of Biology, Massachusetts Institute of Technology , Cambridge MA 02139
label: 3
institution: Howard Hughes Medical Institute, Whitehead Institute
name: Howard Hughes Medical Institute, Whitehead Institute , Cambridge MA 02142
Affiliations: label: 1
institution: Whitehead Institute
name: Whitehead Institute , Cambridge MA 02142
label: 2
institution: Department of Biology, Massachusetts Institute of Technology
name: Department of Biology, Massachusetts Institute of Technology , Cambridge MA 02139
label: 3
institution: Howard Hughes Medical Institute, Whitehead Institute
name: Howard Hughes Medical Institute, Whitehead Institute , Cambridge MA 02142
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: An Efficient Moments-Based Inference Method for Within-Host Bacterial Infection Dynamics
Authors: last_name: Price
first_name: David J.
name: David J. Price
affiliations: label: 1
institution: Department of Veterinary Medicine, University of Cambridge, Madingley Road
country: UK
name: Department of Veterinary Medicine, University of Cambridge, Madingley Road , Cambridge CB3 0ES, UK
last_name: Breuzé
first_name: Alexandre
name: Alexandre Breuzé
affiliations: label: 1
institution: Department of Veterinary Medicine, University of Cambridge, Madingley Road
country: UK
name: Department of Veterinary Medicine, University of Cambridge, Madingley Road , Cambridge CB3 0ES, UK
label: 2
institution: ENSTA-ParisTech
country: France
name: ENSTA-ParisTech , 828 Boulevard des Maréchaux, 91120 Palaiseau, France
last_name: Dybowski
first_name: Richard
name: Richard Dybowski
affiliations: label: 1
institution: Department of Veterinary Medicine, University of Cambridge, Madingley Road
country: UK
name: Department of Veterinary Medicine, University of Cambridge, Madingley Road , Cambridge CB3 0ES, UK
last_name: Restif
first_name: Olivier
name: Olivier Restif
corresponding: yes
affiliations: label: 1
institution: Department of Veterinary Medicine, University of Cambridge, Madingley Road
country: UK
name: Department of Veterinary Medicine, University of Cambridge, Madingley Road , Cambridge CB3 0ES, UK
Affiliations: label: 1
institution: Department of Veterinary Medicine, University of Cambridge, Madingley Road
country: UK
name: Department of Veterinary Medicine, University of Cambridge, Madingley Road , Cambridge CB3 0ES, UK
label: 2
institution: ENSTA-ParisTech
country: France
name: ENSTA-ParisTech , 828 Boulevard des Maréchaux, 91120 Palaiseau, France
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: Genomic regression of claw keratin, taste receptor and light-associated genes inform biology and evolutionary origins of snakes
Authors: orcid: http://orcid.org/0000-0002-7722-7305
last_name: Emerling
first_name: Christopher A.
name: Christopher A. Emerling
corresponding: yes
Affiliations: institution: Museum of Vertebrate Zoology, University of California Berkeley
country: USA
name: Museum of Vertebrate Zoology, University of California Berkeley , Berkeley, CA, USA
Field: Nursing
Document type: preprint
Year: 2017
Title: Diverse modes of synaptic signaling, regulation, and plasticity distinguish two classes of C. elegans glutamatergic neurons
Authors: last_name: Ventimiglia
first_name: Donovan
name: Donovan Ventimiglia
orcid: http://orcid.org/0000-0002-8484-0618
last_name: Bargmann
first_name: Cornelia I.
name: Cornelia I. Bargmann
Affiliations: institution: Lulu and Anthony Wang Laboratory of Neural Circuits and Behavior, The Rockefeller University
country: USA
name: Lulu and Anthony Wang Laboratory of Neural Circuits and Behavior, The Rockefeller University , New York, NY 10065, USA
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: An Event-related Potential Comparison of Facial Expression Processing between Cartoon and Real Faces
Authors: orcid: http://orcid.org/0000-0002-8404-9906
last_name: Zhao
first_name: Jiayin
name: Jiayin Zhao
affiliations: label: 1
institution: Beijing Key Laboratory of Learning and Cognition, College of Education, Capital Normal University
country: China
name: Beijing Key Laboratory of Learning and Cognition, College of Education, Capital Normal University , Beijing, China
last_name: Wang
first_name: Yifang
name: Yifang Wang
affiliations: label: 1
institution: Beijing Key Laboratory of Learning and Cognition, College of Education, Capital Normal University
country: China
name: Beijing Key Laboratory of Learning and Cognition, College of Education, Capital Normal University , Beijing, China
last_name: An
first_name: Licong
name: Licong An
affiliations: label: 1
institution: Beijing Key Laboratory of Learning and Cognition, College of Education, Capital Normal University
country: China
name: Beijing Key Laboratory of Learning and Cognition, College of Education, Capital Normal University , Beijing, China
Affiliations: label: 1
institution: Beijing Key Laboratory of Learning and Cognition, College of Education, Capital Normal University
country: China
name: Beijing Key Laboratory of Learning and Cognition, College of Education, Capital Normal University , Beijing, China
Field: Neuroscience
Document type: preprint
Year: 2018
Title: Graph Peak Caller: calling ChIP-Seq Peaks on Graph-based Reference Genomes
Authors: orcid: http://orcid.org/0000-0001-8941-942X
last_name: Grytten
first_name: Ivar
name: Ivar Grytten
corresponding: yes
affiliations: label: 1
institution: Department of informatics, University of Oslo
country: Norway
name: Department of informatics, University of Oslo , Oslo, Norway
notes: These authors contributed equally to this work.
orcid: http://orcid.org/0000-0003-3359-7619
last_name: Rand
first_name: Knut D.
name: Knut D. Rand
affiliations: label: 2
institution: Department of Mathematics, University of Oslo
country: Norway
name: Department of Mathematics, University of Oslo , Oslo, Norway
orcid: http://orcid.org/0000-0001-5539-0999
last_name: Nederbragt
first_name: Alexander J.
name: Alexander J. Nederbragt
affiliations: label: 1
institution: Department of informatics, University of Oslo
country: Norway
name: Department of informatics, University of Oslo , Oslo, Norway
label: 3
institution: Department of Biosciences, University of Oslo
country: Norway
name: Department of Biosciences, University of Oslo , Oslo, Norway
orcid: http://orcid.org/0000-0001-8198-1426
last_name: Storvik
first_name: Geir O.
name: Geir O. Storvik
affiliations: label: 2
institution: Department of Mathematics, University of Oslo
country: Norway
name: Department of Mathematics, University of Oslo , Oslo, Norway
orcid: http://orcid.org/0000-0002-5156-7109
last_name: Glad
first_name: Ingrid K.
name: Ingrid K. Glad
affiliations: label: 2
institution: Department of Mathematics, University of Oslo
country: Norway
name: Department of Mathematics, University of Oslo , Oslo, Norway
orcid: http://orcid.org/0000-0002-4959-1409
last_name: Sandve
first_name: Geir K.
name: Geir K. Sandve
affiliations: label: 1
institution: Department of informatics, University of Oslo
country: Norway
name: Department of informatics, University of Oslo , Oslo, Norway
Affiliations: label: 1
institution: Department of informatics, University of Oslo
country: Norway
name: Department of informatics, University of Oslo , Oslo, Norway
label: 2
institution: Department of Mathematics, University of Oslo
country: Norway
name: Department of Mathematics, University of Oslo , Oslo, Norway
label: 3
institution: Department of Biosciences, University of Oslo
country: Norway
name: Department of Biosciences, University of Oslo , Oslo, Norway
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018