Title: Slingshot: Cell lineage and pseudotime inference for single-cell transcriptomics
Authors: last_name: Street
first_name: Kelly
name: Kelly Street
affiliations: label: 1
institution: Division of Biostatistics, School of Public Health
name: Division of Biostatistics, School of Public Health , UC Berkeley.
label: 8
institution: Center for Computational Biology
name: Center for Computational Biology , UC Berkeley.
last_name: Risso
first_name: Davide
name: Davide Risso
affiliations: label: 2
institution: Division of Biostatistics and Epidemiology, Department of Healthcare Policy and Research
name: Division of Biostatistics and Epidemiology, Department of Healthcare Policy and Research , Weill Cornell Medicine.
last_name: Fletcher
first_name: Russell B.
name: Russell B. Fletcher
affiliations: label: 3
institution: Department of Molecular and Cell Biology
name: Department of Molecular and Cell Biology , UC Berkeley.
last_name: Das
first_name: Diya
name: Diya Das
affiliations: label: 3
institution: Department of Molecular and Cell Biology
name: Department of Molecular and Cell Biology , UC Berkeley.
last_name: Ngai
first_name: John
name: John Ngai
affiliations: label: 3
institution: Department of Molecular and Cell Biology
name: Department of Molecular and Cell Biology , UC Berkeley.
label: 6
institution: Helen Wills Neuroscience Institute
name: Helen Wills Neuroscience Institute , UC Berkeley.
label: 7
institution: QB3 Berkeley Functional Genomics Laboratory
name: QB3 Berkeley Functional Genomics Laboratory .
last_name: Yosef
first_name: Nir
name: Nir Yosef
affiliations: label: 4
institution: Department of Electrical Engineering and Computer Sciences
name: Department of Electrical Engineering and Computer Sciences , UC Berkeley.
label: 8
institution: Center for Computational Biology
name: Center for Computational Biology , UC Berkeley.
last_name: Purdom
first_name: Elizabeth
name: Elizabeth Purdom
affiliations: label: 5
institution: Department of Statistics
name: Department of Statistics , UC Berkeley.
label: 8
institution: Center for Computational Biology
name: Center for Computational Biology , UC Berkeley.
last_name: Dudoit
first_name: Sandrine
name: Sandrine Dudoit
corresponding: yes
affiliations: label: 1
institution: Division of Biostatistics, School of Public Health
name: Division of Biostatistics, School of Public Health , UC Berkeley.
label: 5
institution: Department of Statistics
name: Department of Statistics , UC Berkeley.
label: 8
institution: Center for Computational Biology
name: Center for Computational Biology , UC Berkeley.
Affiliations: label: 1
institution: Division of Biostatistics, School of Public Health
name: Division of Biostatistics, School of Public Health , UC Berkeley.
label: 2
institution: Division of Biostatistics and Epidemiology, Department of Healthcare Policy and Research
name: Division of Biostatistics and Epidemiology, Department of Healthcare Policy and Research , Weill Cornell Medicine.
label: 3
institution: Department of Molecular and Cell Biology
name: Department of Molecular and Cell Biology , UC Berkeley.
label: 4
institution: Department of Electrical Engineering and Computer Sciences
name: Department of Electrical Engineering and Computer Sciences , UC Berkeley.
label: 5
institution: Department of Statistics
name: Department of Statistics , UC Berkeley.
label: 6
institution: Helen Wills Neuroscience Institute
name: Helen Wills Neuroscience Institute , UC Berkeley.
label: 7
institution: QB3 Berkeley Functional Genomics Laboratory
name: QB3 Berkeley Functional Genomics Laboratory .
label: 8
institution: Center for Computational Biology
name: Center for Computational Biology , UC Berkeley.
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017