dataesr/affiliations-benchmark huggingface dataset:
Title: Exploring differentially expressed key genes related to development of follicle by RNA-seq in Peking ducks ( Anas Platyrhynchos )
Authors: last_name: Ren
first_name: Jindong
name: Jindong Ren
affiliations: label: a
institution: School of Life Science, Taizhou University
name: School of Life Science, Taizhou University , Taizhou, Zhejiang, 318000, People’s Republic of China
last_name: Sun
first_name: Changsen
name: Changsen Sun
affiliations: label: a
institution: School of Life Science, Taizhou University
name: School of Life Science, Taizhou University , Taizhou, Zhejiang, 318000, People’s Republic of China
last_name: Chen
first_name: Li
name: Li Chen
affiliations: label: b
institution: Zhejiang Academy of Agricultural Sciences
name: Zhejiang Academy of Agricultural Sciences , Hangzhou, Zhejiang 310021, People’s Republic of China
last_name: Hu
first_name: Jianhong
name: Jianhong Hu
affiliations: label: c
institution: College of Animal Science and Technology, Northwest Agriculture and Forestry University
name: College of Animal Science and Technology, Northwest Agriculture and Forestry University , Yangling, Shaanxi 712100, People’s Republic of China
last_name: Huang
first_name: Xuetao
name: Xuetao Huang
affiliations: label: b
institution: Zhejiang Academy of Agricultural Sciences
name: Zhejiang Academy of Agricultural Sciences , Hangzhou, Zhejiang 310021, People’s Republic of China
last_name: Liu
first_name: Xiaolin
name: Xiaolin Liu
corresponding: yes
affiliations: label: c
institution: College of Animal Science and Technology, Northwest Agriculture and Forestry University
name: College of Animal Science and Technology, Northwest Agriculture and Forestry University , Yangling, Shaanxi 712100, People’s Republic of China
last_name: Lu
first_name: Lizhi
name: Lizhi Lu
corresponding: yes
affiliations: label: b
institution: Zhejiang Academy of Agricultural Sciences
name: Zhejiang Academy of Agricultural Sciences , Hangzhou, Zhejiang 310021, People’s Republic of China
Affiliations: label: a
institution: School of Life Science, Taizhou University
name: School of Life Science, Taizhou University , Taizhou, Zhejiang, 318000, People’s Republic of China
label: b
institution: Zhejiang Academy of Agricultural Sciences
name: Zhejiang Academy of Agricultural Sciences , Hangzhou, Zhejiang 310021, People’s Republic of China
label: c
institution: College of Animal Science and Technology, Northwest Agriculture and Forestry University
name: College of Animal Science and Technology, Northwest Agriculture and Forestry University , Yangling, Shaanxi 712100, People’s Republic of China
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Introducing py_emra: the Python module for Ensemble Modeling Robustness Analysis
Authors: orcid: http://orcid.org/0000-0001-8469-9995
last_name: Theisen
first_name: Matthew K
name: Matthew K Theisen
corresponding: yes
affiliations: label: 1
institution: Department of Chemical and Biomolecular Engineering, University of California
name: Department of Chemical and Biomolecular Engineering, University of California , Los Angeles
Affiliations: label: 1
institution: Department of Chemical and Biomolecular Engineering, University of California
name: Department of Chemical and Biomolecular Engineering, University of California , Los Angeles
label: 2
institution: Department of Bioengineering, University of California
name: Department of Bioengineering, University of California , Los Angeles
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2016
Title: A transgenic toolkit for visualizing and perturbing microtubules in mice reveals unexpected functions for non-centrosomal arrays in epidermal morphogenesis
Authors: last_name: Muroyama
first_name: Andrew
name: Andrew Muroyama
orcid: http://orcid.org/0000-0003-3901-7013
last_name: Lechler
first_name: Terry
name: Terry Lechler
corresponding: yes
Affiliations: institution: Departments of Dermatology and Cell Biology Duke University Medical Center
name: Departments of Dermatology and Cell Biology Duke University Medical Center , Durham, NC 27710
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: A Modular Photosynthetic Microbial Fuel Cell With Interchangeable Algae Solar Compartments
Authors: last_name: Fleury
first_name: Daniel
name: Daniel Fleury
affiliations: label: 1
institution: John Marshall
name: John Marshall
Affiliations: label: 1
institution: John Marshall
name: John Marshall
Field: Environmental Science
Document type: preprint
Year: 2017
Title: Predictability of Genetic Interactions from Functional Gene Modules
Authors: last_name: Young
first_name: Jonathan H.
name: Jonathan H. Young
last_name: Marcotte
first_name: Edward M.
name: Edward M. Marcotte
corresponding: yes
Affiliations: institution: Institute for Computational Engineering and Sciences, Center for Systems and Synthetic Biology, The University of Texas at Austin
country: USA
name: Institute for Computational Engineering and Sciences, Center for Systems and Synthetic Biology, The University of Texas at Austin , Austin, Texas, USA
institution: Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, Department of Molecular Biosciences
country: USA
name: Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, Department of Molecular Biosciences , The University of Texas at Austin, Austin, Texas, USA
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2016
Title: A theoretical analysis of single molecule protein sequencing via weak binding spectra
Authors: orcid: http://orcid.org/0000-0002-2509-0861
last_name: Rodriques
first_name: Samuel
name: Samuel Rodriques
affiliations: label: 1
institution: Synthetic Neurobiology Group, Department of Biological Engineering
name: Synthetic Neurobiology Group, Department of Biological Engineering , MIT, Cambridge, MA
label: 2
institution: Department of Physics, Department of Brain and Cognitive Sciences
name: Department of Physics, Department of Brain and Cognitive Sciences , MIT, Cambridge, MA
last_name: Marblestone
first_name: Adam
name: Adam Marblestone
affiliations: label: 1
institution: Synthetic Neurobiology Group, Department of Biological Engineering
name: Synthetic Neurobiology Group, Department of Biological Engineering , MIT, Cambridge, MA
orcid: http://orcid.org/0000-0002-0419-3351
last_name: Boyden
first_name: Ed
name: Ed Boyden
affiliations: label: 1
institution: Synthetic Neurobiology Group, Department of Biological Engineering
name: Synthetic Neurobiology Group, Department of Biological Engineering , MIT, Cambridge, MA
label: 3
institution: McGovern Institute, Koch Institute, MA Media Lab
name: McGovern Institute, Koch Institute, MA Media Lab , MIT, Cambridge, MA
notes: esb@media.mit.edu
Affiliations: label: 1
institution: Synthetic Neurobiology Group, Department of Biological Engineering
name: Synthetic Neurobiology Group, Department of Biological Engineering , MIT, Cambridge, MA
label: 2
institution: Department of Physics, Department of Brain and Cognitive Sciences
name: Department of Physics, Department of Brain and Cognitive Sciences , MIT, Cambridge, MA
label: 3
institution: McGovern Institute, Koch Institute, MA Media Lab
name: McGovern Institute, Koch Institute, MA Media Lab , MIT, Cambridge, MA
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Statistical Correction of the Winner’s Curse Explains Replication Variability in Quantitative Trait Genome-Wide Association Studies
Authors: orcid: http://orcid.org/0000-0003-3130-1968
last_name: Palmer
first_name: Cameron
name: Cameron Palmer
affiliations: label: 1
institution: Department of Systems Biology, Columbia University Medical Center, New York
country: United States of America
name: Department of Systems Biology, Columbia University Medical Center, New York , New York, United States of America
label: 2
institution: Department of Computer Science, Columbia University, New York
country: United States of America
name: Department of Computer Science, Columbia University, New York , New York, United States of America
orcid: http://orcid.org/0000-0002-6128-7231
last_name: Pe’er
first_name: Itsik
name: Itsik Pe’er
affiliations: label: 2
institution: Department of Computer Science, Columbia University, New York
country: United States of America
name: Department of Computer Science, Columbia University, New York , New York, United States of America
Affiliations: label: 1
institution: Department of Systems Biology, Columbia University Medical Center, New York
country: United States of America
name: Department of Systems Biology, Columbia University Medical Center, New York , New York, United States of America
label: 2
institution: Department of Computer Science, Columbia University, New York
country: United States of America
name: Department of Computer Science, Columbia University, New York , New York, United States of America
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: Remotely sensed indicators and open-access biodiversity data to assess bird diversity patterns in Mediterranean rural landscapes
Authors: last_name: Ribeiro
first_name: Inês
name: Inês Ribeiro
affiliations: label: a
institution: MARETEC
country: Portugal
name: MARETEC , Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais 1, 1049-001 Lisboa, Portugal
last_name: Proença
first_name: Vânia
name: Vânia Proença
corresponding: yes
affiliations: label: a
institution: MARETEC
country: Portugal
name: MARETEC , Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais 1, 1049-001 Lisboa, Portugal
last_name: Ruiz
first_name: Pere Serra
name: Pere Serra Ruiz
affiliations: label: b
institution: Grumets Research Group
country: Spain
name: Grumets Research Group , Department of Geography, Universitat Autònoma de Barcelona, Edifici B, Campus de la UaB, Barcelona, Spain
last_name: Palma
first_name: Jorge
name: Jorge Palma
affiliations: label: a
institution: MARETEC
country: Portugal
name: MARETEC , Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais 1, 1049-001 Lisboa, Portugal
last_name: Domingo
first_name: Cristina
name: Cristina Domingo
affiliations: label: c
institution: Grumets Research Group
country: Spain
name: Grumets Research Group , CREAF, Campus UAB, Edifici C, Cerdanyola del Vallès, Catalonia, 08193, Spain
last_name: Pons
first_name: Xavier
name: Xavier Pons
affiliations: label: b
institution: Grumets Research Group
country: Spain
name: Grumets Research Group , Department of Geography, Universitat Autònoma de Barcelona, Edifici B, Campus de la UaB, Barcelona, Spain
last_name: Domingos
first_name: Tiago
name: Tiago Domingos
affiliations: label: a
institution: MARETEC
country: Portugal
name: MARETEC , Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais 1, 1049-001 Lisboa, Portugal
Affiliations: label: a
institution: MARETEC
country: Portugal
name: MARETEC , Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais 1, 1049-001 Lisboa, Portugal
label: b
institution: Grumets Research Group
country: Spain
name: Grumets Research Group , Department of Geography, Universitat Autònoma de Barcelona, Edifici B, Campus de la UaB, Barcelona, Spain
label: c
institution: Grumets Research Group
country: Spain
name: Grumets Research Group , CREAF, Campus UAB, Edifici C, Cerdanyola del Vallès, Catalonia, 08193, Spain
Field: Environmental Science
Document type: preprint
Year: 2018
Title: Computational investigation of biological and technical variability in high throughput phenotyping and cell line identification
Authors: orcid: http://orcid.org/0000-0001-8003-6860
last_name: Friedman
first_name: Samuel H.
name: Samuel H. Friedman
corresponding: yes
affiliations: label: 1
institution: Opto-Knowledge Systems, Inc.
country: USA
name: Opto-Knowledge Systems, Inc. , Torrance, CA USA
label: 2
institution: Formerly: Lawrence J. Ellison Institute for Transformative Medicine, University of Southern California
country: USA
name: Formerly: Lawrence J. Ellison Institute for Transformative Medicine, University of Southern California , Los Angeles, CA USA
orcid: http://orcid.org/0000-0002-9925-0151
last_name: Macklin
first_name: Paul
name: Paul Macklin
affiliations: label: 2
institution: Formerly: Lawrence J. Ellison Institute for Transformative Medicine, University of Southern California
country: USA
name: Formerly: Lawrence J. Ellison Institute for Transformative Medicine, University of Southern California , Los Angeles, CA USA
label: 3
institution: Intelligent Systems Engineering, Indiana University
country: USA
name: Intelligent Systems Engineering, Indiana University , Bloomington, IN USA
notes: email: Paul.Macklin@MathCancer.org Twitter: @MathCancer
Affiliations: label: 1
institution: Opto-Knowledge Systems, Inc.
country: USA
name: Opto-Knowledge Systems, Inc. , Torrance, CA USA
label: 2
institution: Formerly: Lawrence J. Ellison Institute for Transformative Medicine, University of Southern California
country: USA
name: Formerly: Lawrence J. Ellison Institute for Transformative Medicine, University of Southern California , Los Angeles, CA USA
label: 3
institution: Intelligent Systems Engineering, Indiana University
country: USA
name: Intelligent Systems Engineering, Indiana University , Bloomington, IN USA
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2017
Title: Is the blunderbuss a misleading visual metaphor for stasis and punctuated evolution?
Authors: last_name: Waller
first_name: John T.
name: John T. Waller
Affiliations: institution: Evolutionary Ecology Unit, Department of Biology, Lund University
country: Sweden
name: Evolutionary Ecology Unit, Department of Biology, Lund University , SE-223 62 Lund, Sweden
Field: Earth and Planetary Sciences
Document type: preprint
Year: 2018
Title: Risks in signal processing pipelines influencing the estimation of phase dependency for EEG-TMS
Authors: orcid: http://orcid.org/0000-0003-0970-9705
last_name: Guggenberger
first_name: Robert
name: Robert Guggenberger
corresponding: yes
last_name: Scherer
first_name: Maximilian
name: Maximilian Scherer
last_name: Gharabaghi
first_name: Alireza
name: Alireza Gharabaghi
corresponding: yes
Affiliations: institution: Division of Functional and Restorative Neurosurgery, and Tuebingen Neuro Campus, Eberhard Karls University Tuebingen
country: Germany
name: Division of Functional and Restorative Neurosurgery, and Tuebingen Neuro Campus, Eberhard Karls University Tuebingen , Tuebingen, Germany
Field: Neuroscience
Document type: preprint
Year: 2018
Title: A bacterial DNA repair pathway specific to a natural antibiotic
Authors: last_name: Burby
first_name: Peter E.
name: Peter E. Burby
last_name: Simmons
first_name: Lyle A.
name: Lyle A. Simmons
corresponding: yes
Affiliations: institution: Department of Molecular, Cellular, and Developmental Biology, University of Michigan
country: United States
name: Department of Molecular, Cellular, and Developmental Biology, University of Michigan , Ann Arbor, MI 48109, United States .
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: A computational framework for converting high-throughput DNA sequencing data into neural circuit connectivity
Authors: last_name: Oyibo
first_name: Hassana
name: Hassana Oyibo
affiliations: label: 1
institution: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor
name: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor , NY, 11724
label: 3
institution: Watson School of Biological Sciences
name: Watson School of Biological Sciences , Neuroscience, Cold Spring Harbor, NY, 11724
last_name: Cao
first_name: Cang
name: Cang Cao
affiliations: label: 1
institution: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor
name: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor , NY, 11724
last_name: Ferrante
first_name: Daniel D.
name: Daniel D. Ferrante
affiliations: label: 1
institution: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor
name: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor , NY, 11724
last_name: Zhan
first_name: Huiqing
name: Huiqing Zhan
affiliations: label: 1
institution: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor
name: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor , NY, 11724
last_name: Koulakov
first_name: Alex
name: Alex Koulakov
affiliations: label: 1
institution: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor
name: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor , NY, 11724
last_name: Enquist
first_name: Lynn
name: Lynn Enquist
affiliations: label: 2
institution: Princeton University, Molecular Biology
name: Princeton University, Molecular Biology , Princeton, NJ, 08540
last_name: Dubnau
first_name: Joshua
name: Joshua Dubnau
affiliations: label: 1
institution: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor
name: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor , NY, 11724
last_name: Zador
first_name: Anthony
name: Anthony Zador
affiliations: label: 1
institution: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor
name: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor , NY, 11724
Affiliations: label: 1
institution: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor
name: Cold Spring Harbor Laboratory, Neuroscience, Cold Spring Harbor , NY, 11724
label: 2
institution: Princeton University, Molecular Biology
name: Princeton University, Molecular Biology , Princeton, NJ, 08540
label: 3
institution: Watson School of Biological Sciences
name: Watson School of Biological Sciences , Neuroscience, Cold Spring Harbor, NY, 11724
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018
Title: Gini coefficients for measuring the distribution of sexually transmitted infections among individuals with different levels of sexual activity
Authors: last_name: Gsteiger
first_name: Sandro
name: Sandro Gsteiger
affiliations: label: 1
institution: Institute of Social and Preventive Medicine (ISPM), University of Bern
country: Switzerland
name: Institute of Social and Preventive Medicine (ISPM), University of Bern , Switzerland
orcid: http://orcid.org/0000-0003-4817-8986
last_name: Low
first_name: Nicola
name: Nicola Low
affiliations: label: 1
institution: Institute of Social and Preventive Medicine (ISPM), University of Bern
country: Switzerland
name: Institute of Social and Preventive Medicine (ISPM), University of Bern , Switzerland
orcid: http://orcid.org/0000-0002-1067-1583
last_name: Sonnenberg
first_name: Pam
name: Pam Sonnenberg
affiliations: label: 2
institution: Institut for Global Health, University College London
country: UK
name: Institut for Global Health, University College London , London, UK
orcid: http://orcid.org/0000-0002-4566-8042
last_name: Mercer
first_name: Catherine H
name: Catherine H Mercer
affiliations: label: 2
institution: Institut for Global Health, University College London
country: UK
name: Institut for Global Health, University College London , London, UK
orcid: http://orcid.org/0000-0002-5230-6760
last_name: Althaus
first_name: Christian L
name: Christian L Althaus
corresponding: yes
affiliations: label: 1
institution: Institute of Social and Preventive Medicine (ISPM), University of Bern
country: Switzerland
name: Institute of Social and Preventive Medicine (ISPM), University of Bern , Switzerland
Affiliations: label: 1
institution: Institute of Social and Preventive Medicine (ISPM), University of Bern
country: Switzerland
name: Institute of Social and Preventive Medicine (ISPM), University of Bern , Switzerland
label: 2
institution: Institut for Global Health, University College London
country: UK
name: Institut for Global Health, University College London , London, UK
Field: Immunology and Microbiology
Document type: preprint
Year: 2018
Title: Adaptation to chronic malnutrition leads to reduced dependence on microbiota in Drosophila
Authors: last_name: Erkosar
first_name: Berra
name: Berra Erkosar
corresponding: yes
affiliations: label: 1
institution: Department of Ecology and Evolution, University of Lausanne
country: Switzerland
name: Department of Ecology and Evolution, University of Lausanne , CH-1015 Lausanne, Switzerland
label: 2
institution: Department of Fundamental Microbiology, University of Lausanne
country: Switzerland
name: Department of Fundamental Microbiology, University of Lausanne , CH-1015 Lausanne, Switzerland
last_name: Kolly
first_name: Sylvain
name: Sylvain Kolly
affiliations: label: 1
institution: Department of Ecology and Evolution, University of Lausanne
country: Switzerland
name: Department of Ecology and Evolution, University of Lausanne , CH-1015 Lausanne, Switzerland
last_name: van der Meer
first_name: Jan R.
name: Jan R. van der Meer
affiliations: label: 2
institution: Department of Fundamental Microbiology, University of Lausanne
country: Switzerland
name: Department of Fundamental Microbiology, University of Lausanne , CH-1015 Lausanne, Switzerland
last_name: Kawecki
first_name: Tadeusz J.
name: Tadeusz J. Kawecki
affiliations: label: 1
institution: Department of Ecology and Evolution, University of Lausanne
country: Switzerland
name: Department of Ecology and Evolution, University of Lausanne , CH-1015 Lausanne, Switzerland
Affiliations: label: 1
institution: Department of Ecology and Evolution, University of Lausanne
country: Switzerland
name: Department of Ecology and Evolution, University of Lausanne , CH-1015 Lausanne, Switzerland
label: 2
institution: Department of Fundamental Microbiology, University of Lausanne
country: Switzerland
name: Department of Fundamental Microbiology, University of Lausanne , CH-1015 Lausanne, Switzerland
Field: Agricultural and Biological Sciences
Document type: preprint
Year: 2017
Title: Overlapping and unique neural circuits support perceptual decision making and confidence
Authors: orcid: http://orcid.org/0000-0003-2737-4830
last_name: Yeon
first_name: Jiwon
name: Jiwon Yeon
corresponding: yes
orcid: http://orcid.org/0000-0002-5265-2559
last_name: Rahnev
first_name: Dobromir
name: Dobromir Rahnev
Affiliations: institution: School of Psychology, Georgia Institute of Technology
name: School of Psychology, Georgia Institute of Technology , Atlanta, GA 30332
Field: Neuroscience
Document type: preprint
Year: 2018
Title: Gene detection models outperform gene expression for large-scale scRNA-seq analysis
Authors: last_name: Li
first_name: Ruoxin
name: Ruoxin Li
affiliations: label: 1
institution: Graduate Group in Biostatistics
name: Graduate Group in Biostatistics
label: 2
institution: Genome Center
name: Genome Center
last_name: Quon
first_name: Gerald
name: Gerald Quon
corresponding: yes
affiliations: label: 1
institution: Graduate Group in Biostatistics
name: Graduate Group in Biostatistics
label: 2
institution: Genome Center
name: Genome Center
label: 3
institution: Department of Molecular and Cellular Biology, University of California
name: Department of Molecular and Cellular Biology, University of California , Davis, Davis, CA
Affiliations: label: 1
institution: Graduate Group in Biostatistics
name: Graduate Group in Biostatistics
label: 2
institution: Genome Center
name: Genome Center
label: 3
institution: Department of Molecular and Cellular Biology, University of California
name: Department of Molecular and Cellular Biology, University of California , Davis, Davis, CA
Field: Biochemistry, Genetics and Molecular Biology
Document type: preprint
Year: 2018