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"GSM4441750_CTRL_MDTG_03_15.optimal_peak.narrowPeak.gz", "GSM4441687_CTRL_CAUD_13_1226.optimal_peak.narrowPeak.gz", "GSM4441731_CTRH_HIPP_14_0380.optimal_peak.narrowPeak.gz", "GSM4441737_CTRL_MDFG_16_32.optimal_peak.narrowPeak.gz", "GSM4441745_CTRL_MDFG_09_50.optimal_peak.narrowPeak.gz", "GSM4441754_CTRL_MDTG_04_38.idr.optimal_peak.narrowPeak.gz", "GSM4441712_CTRL_HIPP_00_38.idr.optimal_peak.narrowPeak.gz", "GSM4441763_CTRL_PARL_11_0393.idr.optimal_peak.narrowPeak.gz", "GSM4441746_CTRL_MDTG_00_38.idr.optimal_peak.narrowPeak.gz", "GSM4441780_CTRL_PTMN_03_41.idr.optimal_peak.narrowPeak.gz", "GSM4441781_CTRL_PTMN_03_66.optimal_peak.narrowPeak.gz", "GSM4441726_CTRH_HIPP_08_0298.idr.optimal_peak.narrowPeak.gz", "GSM4441758_CTRH_PARL_07_1058.optimal_peak.narrowPeak.gz", "GSM4441805_CTRL_SMTG_09_1589.optimal_peak.narrowPeak.gz", "GSM4441813_CTRH_SMTG_07_1287.idr.optimal_peak.narrowPeak.gz", "GSM4441792_CTRL_SUNI_16_32.idr.optimal_peak.narrowPeak.gz", "GSM4441794_CTRL_SUNI_03_15.idr.optimal_peak.narrowPeak.gz", "GSM4441790_CTRL_SUNI_09_50.idr.optimal_peak.narrowPeak.gz", "GSM4441739_CTRL_MDFG_03_39.optimal_peak.narrowPeak.gz", "GSM4441738_CTRL_MDFG_01_37.optimal_peak.narrowPeak.gz", "GSM4441803_CTRH_SMTG_15_1025.idr.optimal_peak.narrowPeak.gz", "GSM4441806_CTRL_SMTG_11_0311.optimal_peak.narrowPeak.gz", "GSM4441810_CTRL_SMTG_14_0586.optimal_peak.narrowPeak.gz", "GSM4441772_CTRH_PARL_13_0962.optimal_peak.narrowPeak.gz", "GSM4441798_CTRL_SUNI_04_38.optimal_peak.narrowPeak.gz", "GSM4441776_CTRL_PTMN_00_38.idr.optimal_peak.narrowPeak.gz", "GSM4441748_CTRL_MDTG_16_10.idr.optimal_peak.narrowPeak.gz", "GSM4441775_CTRH_PARL_14_1383.optimal_peak.narrowPeak.gz", "GSM4441697_CTRH_CAUD_14_0380.optimal_peak.narrowPeak.gz", "GSM4441809_CTRL_SMTG_13_1226.optimal_peak.narrowPeak.gz", "GSM4441691_CTRL_CAUD_01_31.optimal_peak.narrowPeak.gz", "GSM4441768_CTRH_PARL_07_1144.optimal_peak.narrowPeak.gz", "GSM4441720_CTRL_HIPP_14_0941.optimal_peak.narrowPeak.gz", "GSM4441692_CTRH_CAUD_07_1144.idr.optimal_peak.narrowPeak.gz", "GSM4441685_CTRL_CAUD_11_0393.optimal_peak.narrowPeak.gz", "GSM4441809_CTRL_SMTG_13_1226.idr.optimal_peak.narrowPeak.gz", "GSM4441730_CTRH_HIPP_13_0962.idr.optimal_peak.narrowPeak.gz", "GSM4441804_CTRL_SMTG_06_1516.idr.optimal_peak.narrowPeak.gz", "GSM4441784_CTRL_PTMN_07_28.optimal_peak.narrowPeak.gz", "GSM4441708_CTRL_CAUD_03_66.idr.optimal_peak.narrowPeak.gz", "GSM4441785_CTRL_PTMN_09_35.idr.optimal_peak.narrowPeak.gz", "GSM4441715_CTRL_HIPP_06_1516.optimal_peak.narrowPeak.gz", "GSM4441707_CTRL_CAUD_03_41.idr.optimal_peak.narrowPeak.gz", "GSM4441719_CTRL_HIPP_14_0586.idr.optimal_peak.narrowPeak.gz", "GSM4441739_CTRL_MDFG_03_39.idr.optimal_peak.narrowPeak.gz", "GSM4441812_CTRH_SMTG_07_1144.idr.optimal_peak.narrowPeak.gz", "GSM4441755_CTRL_MDTG_05_16.optimal_peak.narrowPeak.gz", "GSM4441733_CTRH_HIPP_14_1383.idr.optimal_peak.narrowPeak.gz", "GSM4441732_CTRH_HIPP_14_0513.idr.optimal_peak.narrowPeak.gz", "GSM4441747_CTRL_MDTG_15_78.idr.optimal_peak.narrowPeak.gz", "GSM4441770_CTRH_PARL_08_0298.optimal_peak.narrowPeak.gz", "GSM4441811_CTRL_SMTG_14_1018.idr.optimal_peak.narrowPeak.gz", "GSM4441768_CTRH_PARL_07_1144.idr.optimal_peak.narrowPeak.gz", "GSM4441751_CTRL_MDTG_03_39.optimal_peak.narrowPeak.gz", "GSM4441770_CTRH_PARL_08_0298.idr.optimal_peak.narrowPeak.gz", "GSM4441756_CTRL_MDTG_09_35.idr.optimal_peak.narrowPeak.gz", "GSM4441797_CTRL_SUNI_03_66.optimal_peak.narrowPeak.gz", "GSM4441802_CTRH_SMTG_15_1023.optimal_peak.narrowPeak.gz", "GSM4441699_CTRH_CAUD_14_1383.optimal_peak.narrowPeak.gz", "GSM4441682_CTRL_CAUD_15_78.idr.optimal_peak.narrowPeak.gz", "GSM4441701_CTRH_CAUD_15_1025.idr.optimal_peak.narrowPeak.gz", "GSM4441814_CTRH_SMTG_08_0712.idr.optimal_peak.narrowPeak.gz", "GSM4441811_CTRL_SMTG_14_1018.optimal_peak.narrowPeak.gz", "GSM4441707_CTRL_CAUD_03_41.optimal_peak.narrowPeak.gz", "GSM4441771_CTRH_PARL_10_0867.idr.optimal_peak.narrowPeak.gz", "GSM4441684_CTRL_CAUD_16_32.optimal_peak.narrowPeak.gz", "GSM4441791_CTRL_SUNI_15_78.idr.optimal_peak.narrowPeak.gz", "GSM4441806_CTRL_SMTG_11_0311.idr.optimal_peak.narrowPeak.gz", "GSM4441683_CTRL_CAUD_16_10.idr.optimal_peak.narrowPeak.gz", "GSM4441717_CTRL_HIPP_13_0038.idr.optimal_peak.narrowPeak.gz", "GSM4441714_CTRH_HIPP_15_1025.idr.optimal_peak.narrowPeak.gz", "GSM4441681_CTRL_CAUD_09_35.optimal_peak.narrowPeak.gz", "GSM4441781_CTRL_PTMN_03_66.idr.optimal_peak.narrowPeak.gz", "GSM4441763_CTRL_PARL_11_0393.optimal_peak.narrowPeak.gz", "GSM4441693_CTRH_CAUD_07_1287.idr.optimal_peak.narrowPeak.gz", "GSM4441713_CTRH_HIPP_15_1023.optimal_peak.narrowPeak.gz", "GSM4441774_CTRH_PARL_14_0513.optimal_peak.narrowPeak.gz", "GSM4441701_CTRH_CAUD_15_1025.optimal_peak.narrowPeak.gz", "GSM4441800_CTRL_SUNI_06_57.idr.optimal_peak.narrowPeak.gz", "GSM4441799_CTRL_SUNI_05_16.idr.optimal_peak.narrowPeak.gz", "GSM5291624_RAG_F11_0007_P12_V11.narrowPeak.gz", "GSM4441687_CTRL_CAUD_13_1226.idr.optimal_peak.narrowPeak.gz", "GSM4441801_CTRH_SMTG_07_1058.idr.optimal_peak.narrowPeak.gz", "GSM4441691_CTRL_CAUD_01_31.idr.optimal_peak.narrowPeak.gz", "GSM4441740_CTRL_MDFG_03_41.idr.optimal_peak.narrowPeak.gz"], "Tumor tissue": ["GSM6008267_TCF21_peaks.narrowPeak.gz"], "mammary gland/breast; derived from metastatic site: pleural effusion": ["GSM4151571_ChIP_seq_mH2A1_peaks.bed.gz", "GSM4151570_ChIP_seq_mH2A1.1_peaks.bed.gz"], "Endometriosis": ["GSM5934078_Endometrioid_375-Endo_H3K27ac_hg38.overlap.bfilt.narrowPeak.gz", "GSM5934079_Endometrioid_589-Endo_H3K27ac_hg38.overlap.bfilt.narrowPeak.gz"], "Stroma": ["GSM5934081_Endometrioid_589-St_H3K27ac_hg38.overlap.bfilt.narrowPeak.gz", "GSM5934080_Endometrioid_375-Str_H3K27ac_hg38.overlap.bfilt.narrowPeak.gz"], "Fallopian Tube": ["GSM5934084_06_FT19123-A-before_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934086_12_FT64090_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934082_01_FT19123-B-after_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934083_02_FT19123-B-before_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934085_05_L-FT19155-03_ATAC_hg38_peaks_filtered.bed.gz"], "Clear Cell Ovarian Cancer": ["GSM5934087_09_OCT-511_ATAC_hg38_peaks_filtered.bed.gz"], "High-Grade Serous Carcinoma": ["GSM5934092_08_s1382_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934089_09_s1040_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934093_03_s2640_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934091_07_s1070_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934094_06_s2722_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934095_02_s2904_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934090_05_s1048_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934097_10_s949_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934096_01_s3263_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934088_04_s1015_ATAC_hg38_peaks_filtered.bed.gz"], "liver": ["GSM5569765_H3K79me3_C_peaks.broadPeak.gz", "GSM5569762_H3K79me3_peaks.broadPeak.gz", "GSM5569766_H3K79me3_OE_peaks.broadPeak.gz", "GSM5569763_H3K79me2_peaks.broadPeak.gz"], "Coronary artery (LAD)": ["GSM5681679_UVA005_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681661_UVA045_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681681_UVA039_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681672_UVA080_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681675_UVA069_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681651_UVA108_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681653_UVA007_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681671_UVA053_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681665_UVA057_CA_ATAC_3_peaks_rmBlacklist.narrowPeak.gz", "GSM5681649_UVA019_CA_ATAC_3_peaks_rmBlacklist.narrowPeak.gz", "GSM5681654_UVA066_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681652_UVA049_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681676_UVA094_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681664_UVA020_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz", "GSM5681680_UVA054_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681660_UVA027_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681662_UVA023_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681659_UVA064_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681655_UVA083_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681663_UVA014_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz", "GSM5681668_UVA046_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681658_UVA068_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681678_UVA061_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681674_UVA036_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "Coronary artery (LCX)": ["GSM5681650_UVA067_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "Coronary artery (RCA)": ["GSM5681666_UVA040_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681677_UVA112_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681673_UVA015_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz", "GSM5681670_UVA050_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681656_UVA079_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681667_UVA030_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681682_UVA008_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz", "GSM5681683_UVA062_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681657_UVA009_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681669_UVA058_CA_ATAC_1_peaks_rmBlacklist.narrowPeak.gz"], "Breast cancer PDX model Gar15-13": ["GSM5218282_IVC018_Gar15-13_Decitabine_4_ER_ChIP_peaks.narrowPeak.gz", "GSM5218298_Gar15-13_FOXA1_Veh_3_peaks.narrowPeak.gz", "GSM5218283_IVC018_Gar15-13_Decitabine_5_ER_ChIP_peaks.narrowPeak.gz", "GSM5218297_Gar15-13_FOXA1_Veh_2_peaks.narrowPeak.gz", "GSM5218281_IVC018_Gar15-13_Veh_4_ER_ChIP_peaks.narrowPeak.gz", "GSM5218280_IVC018_Gar15-13_Veh_3_ER_ChIP_peaks.narrowPeak.gz", "GSM5218296_Gar15-13_FOXA1_Veh_1_peaks.narrowPeak.gz", "GSM5218299_Gar15-13_FOXA1_Veh_4_peaks.narrowPeak.gz", "GSM5218278_IVC018_Gar15-13_Veh_1_ER_ChIP_peaks.narrowPeak.gz", "GSM5218279_IVC018_Gar15-13_Veh_2_ER_ChIP_peaks.narrowPeak.gz", "GSM5218285_IVC018_Gar15-13_Decitabine_10_ER_ChIP_peaks.narrowPeak.gz", "GSM5218284_IVC018_Gar15-13_Decitabine_9_ER_ChIP_peaks.narrowPeak.gz"], "Breast cancer PDX model HCI005": ["GSM5218287_PDXHCI005_Veh_1_ER_ChIP_peaks.narrowPeak.gz", "GSM5218294_PDXHCI005_Dec_3_ER_ChIP_peaks.narrowPeak.gz", "GSM5218295_PDXHCI005_Dec_pooled_input_peaks.narrowPeak.gz", "GSM5218288_PDXHCI005_Veh_2_ER_ChIP_peaks.narrowPeak.gz", "GSM5218291_PDXHCI005_Veh_pooled_input_peaks.narrowPeak.gz", "GSM5218292_PDXHCI005_Dec_1_ER_ChIP_peaks.narrowPeak.gz", "GSM5218293_PDXHCI005_Dec_2_ER_ChIP_peaks.narrowPeak.gz", "GSM5218290_PDXHCI005_Veh_4_ER_ChIP_peaks.narrowPeak.gz"], "Breast cancer PDX model HCI006": ["GSM5218289_PDXHCI005_Veh_3_ER_ChIP_peaks.narrowPeak.gz"], "ovarian carcinoma": ["GSM5261787_A2780_cont_final.narrowPeak.gz", "GSM5261790_A2780cis_cisplatin_final.narrowPeak.gz", "GSM5261789_A2780_cisplatin_final.narrowPeak.gz", "GSM5261788_A2780cis_cont_final.narrowPeak.gz"], "colorectal cancer": ["GSM4872080_ctrl_PB.narrowPeak.gz", "GSM4872079_ctrl_B.narrowPeak.gz", "GSM4872083_treat_B_peaks.narrowPeak.gz", "GSM4872089_treat_h3k27ac.narrowPeak.gz", "GSM4872081_ctrl_PS.narrowPeak.gz", "GSM4872085_treat_PS.narrowPeak.gz", "GSM4872087_ctrl_h3k27ac.narrowPeak.gz", "GSM4872084_treat_PB.narrowPeak.gz"], "myeloid dendritic cells": ["GSM5107570_ChIP_09_vs_ChIP_12_broad_peaks.broadPeak.gz", "GSM5107572_ChIP_11_vs_ChIP_12_broad_peaks.broadPeak.gz", "GSM5107571_ChIP_10_vs_ChIP_12_broad_peaks.broadPeak.gz", "GSM5107564_ChIP_03_vs_ChIP_04_broad_peaks.broadPeak.gz", "GSM5107587_ChIP_26_vs_ChIP_28_broad_peaks.broadPeak.gz", "GSM5107580_ChIP_19_vs_ChIP_20_broad_peaks.broadPeak.gz", "GSM5107592_ChIP_31_vs_ChIP_32_broad_peaks.broadPeak.gz", "GSM5107566_ChIP_05_vs_ChIP_08_broad_peaks.broadPeak.gz", "GSM5107567_ChIP_06_vs_ChIP_08_broad_peaks.broadPeak.gz", "GSM5107591_ChIP_30_vs_ChIP_32_broad_peaks.broadPeak.gz", "GSM5107576_ChIP_15_vs_ChIP_16_broad_peaks.broadPeak.gz", "GSM5107584_ChIP_23_vs_ChIP_24_broad_peaks.broadPeak.gz", "GSM5107574_ChIP_13_vs_ChIP_16_broad_peaks.broadPeak.gz", "GSM5107563_ChIP_02_vs_ChIP_04_broad_peaks.broadPeak.gz", "GSM5107575_ChIP_14_vs_ChIP_16_broad_peaks.broadPeak.gz", "GSM5107568_ChIP_07_vs_ChIP_08_broad_peaks.broadPeak.gz", "GSM5107586_ChIP_25_vs_ChIP_28_broad_peaks.broadPeak.gz", "GSM5107578_ChIP_17_vs_ChIP_20_broad_peaks.broadPeak.gz", "GSM5107583_ChIP_22_vs_ChIP_24_broad_peaks.broadPeak.gz", "GSM5107579_ChIP_18_vs_ChIP_20_broad_peaks.broadPeak.gz", "GSM5107590_ChIP_29_vs_ChIP_32_broad_peaks.broadPeak.gz", "GSM5107582_ChIP_21_vs_ChIP_24_broad_peaks.broadPeak.gz", "GSM5107562_ChIP_01_vs_ChIP_04_broad_peaks.broadPeak.gz", "GSM5107588_ChIP_27_vs_ChIP_28_broad_peaks.broadPeak.gz"], "Nasopharyngeal carcinoma": ["GSM5027779_Xeno-1915_candidate_circ_junctions.bed.gz", "GSM5027777_Xeno-32_candidate_circ_junctions.bed.gz", "GSM5027782_NPC-M1_candidate_circ_junctions.bed.gz", "GSM5027780_Xeno-2117_candidate_circ_junctions.bed.gz", "GSM5027783_NPC-M2_candidate_circ_junctions.bed.gz", "GSM5027773_C666-1_candidate_circ_junctions.bed.gz", "GSM5027775_C15_candidate_circ_junctions.bed.gz", "GSM5027781_Xeno-99186_candidate_circ_junctions.bed.gz", "GSM5027778_Xeno-666_candidate_circ_junctions.bed.gz", "GSM5027774_NPC43_candidate_circ_junctions.bed.gz", "GSM5027776_C17_candidate_circ_junctions.bed.gz"], "pHGG": ["GSM4974197_GBM002-P1C8_H3K36me3_1_peaks.broadPeak.gz", "GSM4974215_GBM002-P2D3-PBr-WT_H3K36me3_1_peaks.broadPeak.gz", "GSM4974211_GBM002-P2D3-PBr-G34R_v5-tag_1_peaks.broadPeak.gz", "GSM4974207_GBM002-P2D3-PBr-G34R_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974230_GBM002-Parental_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974226_GBM002-Parental_H3K27me3_2_peaks.broadPeak.gz", "GSM4974213_GBM002-P2D3-PBr-WT_H3K27me3_1_peaks.broadPeak.gz", "GSM4974223_GBM002-Parental_G34R_1_peaks.broadPeak.gz", "GSM4974214_GBM002-P2D3-PBr-WT_H3K27me3_2_peaks.broadPeak.gz", "GSM4974222_GBM002-P2D3-PBr-WT_v5-tag_2_peaks.broadPeak.gz", "GSM4974206_GBM002-P2D3-PBr-G34R_H3K36me3_2_peaks.broadPeak.gz", "GSM4974217_GBM002-P2D3-PBr-WT_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974212_GBM002-P2D3-PBr-G34R_v5-tag_2_peaks.broadPeak.gz", "GSM4974194_GBM002-P1C8_G34R_2_peaks.broadPeak.gz", "GSM4974199_GBM002-P1C8_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974200_GBM002-P1C8_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974205_GBM002-P2D3-PBr-G34R_H3K36me3_1_peaks.broadPeak.gz", "GSM4974203_GBM002-P2D3-PBr-G34R_H3K27me3_1_peaks.broadPeak.gz", "GSM4974198_GBM002-P1C8_H3K36me3_2_peaks.broadPeak.gz", "GSM4974196_GBM002-P1C8_H3K27me3_2_peaks.broadPeak.gz", "GSM4974216_GBM002-P2D3-PBr-WT_H3K36me3_2_peaks.broadPeak.gz", "GSM4974221_GBM002-P2D3-PBr-WT_v5-tag_1_peaks.broadPeak.gz", "GSM4974224_GBM002-Parental_G34R_2_peaks.broadPeak.gz", "GSM4974229_GBM002-Parental_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974208_GBM002-P2D3-PBr-G34R_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974204_GBM002-P2D3-PBr-G34R_H3K27me3_2_peaks.broadPeak.gz", "GSM4974195_GBM002-P1C8_H3K27me3_1_peaks.broadPeak.gz", "GSM4974218_GBM002-P2D3-PBr-WT_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974193_GBM002-P1C8_G34R_1_peaks.broadPeak.gz", "GSM4974225_GBM002-Parental_H3K27me3_1_peaks.broadPeak.gz", "GSM4974228_GBM002-Parental_H3K36me3_2_peaks.broadPeak.gz", "GSM4974227_GBM002-Parental_H3K36me3_1_peaks.broadPeak.gz"], "anterior cingulate cortex (ACC)": ["GSM4663521_ACC_1936_AP_peaks.narrowPeak.gz", "GSM4663520_ACC_1927_AP_peaks.narrowPeak.gz", "GSM4663519_ACC_1927_AN_peaks.narrowPeak.gz"], "iPSC were differentiated to microglia-like cells": ["GSM4977139_PPMI_iMGL_3453.narrowPeak.gz", "GSM4977137_PPMI_iMGL_3411.narrowPeak.gz", "GSM4977138_PPMI_iMGL_3446.narrowPeak.gz", "GSM4977140_PPMI_iMGL_4101.narrowPeak.gz"], "iPSC were differentiated to forebrain neuron-like cells": ["GSM4977141_33i_FBn_50katac1.narrowPeak.gz", "GSM4977142_33i_FBn_50katac2.narrowPeak.gz", "GSM4977143_33i_FBn_50katac3.narrowPeak.gz"], "Bladder tumor": ["GSM4201830_Basal2_BMP_o.e_CAF-FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201664_Basal2_FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz", "GSM4483247_Basal2_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201672_Luminal2_FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz", "GSM4483259_Luminal2_FOXA1_k.o_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201667_Basal1_BMP_o.e_CAF-FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz", "GSM4201838_Luminal2_BMP_k.o_CAF_ChIP_peaks.narrowPeak.gz", "GSM4201668_Basal2_BMP_o.e_CAF-FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz", "GSM4483253_Basal2_BMP_o.e_CAF-FOXA1_k.o_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201827_Basal1_BMP_o.e_CAF_ChIP_peaks.narrowPeak.gz", "GSM4201662_Basal2_ATAC_peaks.narrowPeak.gz", "GSM4201826_Basal2_FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz", "GSM4483263_Luminal2_BMP_k.o_CAF-FOXA1_o.e_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201828_Basal2_BMP_o.e_CAF_ChIP_peaks.narrowPeak.gz", "GSM4483261_Luminal2_BMP_k.o_CAF_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201674_Luminal2_BMP_k.o_CAF_ATAC_peaks.narrowPeak.gz", "GSM4483246_Basal1_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4483248_Basal1_FOXA1_o.e_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4483252_Basal1_BMP_o.e_CAF-FOXA1_k.o_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201837_Luminal1_BMP_k.o_CAF_ChIP_peaks.narrowPeak.gz", "GSM4483256_Luminal1_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201834_Luminal2_ChIP_peaks.narrowPeak.gz", "GSM4201665_Basal1_BMP_o.e_CAF_ATAC_peaks.narrowPeak.gz", "GSM4201833_Luminal1_ChIP_peaks.narrowPeak.gz", "GSM4201836_Luminal2_FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201663_Basal1_FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz", "GSM4201669_Luminal1_ATAC_peaks.narrowPeak.gz", "GSM4201839_Luminal1_BMP_k.o_CAF-FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz", "GSM4483250_Basal1_BMP_o.e_CAF_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201673_Luminal1_BMP_k.o_CAF_ATAC_peaks.narrowPeak.gz", "GSM4483260_Luminal1_BMP_k.o_CAF_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201829_Basal1_BMP_o.e_CAF-FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201676_Luminal2_BMP_k.o_CAF-FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz", "GSM4201825_Basal1_FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201840_Luminal2_BMP_k.o_CAF-FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201675_Luminal1_BMP_k.o_CAF-FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz", "GSM4483249_Basal2_FOXA1_o.e_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4483257_Luminal2_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201823_Basal1_ChIP_peaks.narrowPeak.gz", "GSM4201835_Luminal1_FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201666_Basal2_BMP_o.e_CAF_ATAC_peaks.narrowPeak.gz", "GSM4201661_Basal1_ATAC_peaks.narrowPeak.gz", "GSM4483262_Luminal1_BMP_k.o_CAF-FOXA1_o.e_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201670_Luminal2_ATAC_peaks.narrowPeak.gz", "GSM4483258_Luminal1_FOXA1_k.o_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201824_Basal2_ChIP_peaks.narrowPeak.gz", "GSM4483251_Basal2_BMP_o.e_CAF_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201671_Luminal1_FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz"], "lung, bronchus": ["GSM4732799_NT-3.1Loop-H3.3_peaks.narrowPeak.gz", "GSM4732797_NT-H3.1-PolyA-H3.3_peaks.narrowPeak.gz", "GSM4732801_NT-Empty-H3.3_peaks.narrowPeak.gz", "GSM4732795_FH3.3-NT-H3.1-Loop_peaks.narrowPeak.gz", "GSM4732803_As-96h-H3.3_peaks.narrowPeak.gz", "GSM4732805_Ctrl-96h-H3.3_peaks.narrowPeak.gz", "GSM4732793_FH3.3-NT-Empty_peaks.narrowPeak.gz"], "postnatal thymus": ["GSM4566011_macs2_me3_SP8P_d2_20.bam_peaks.broadPeak.gz", "GSM4566042_macs2_ac_DP3P_d1_52.bam_summits.bed.gz", "GSM4566036_macs2_k4_gd1P_d2_45.bam_summits.bed.gz", "GSM4566027_macs2_k4_34P1M_d2_36.bam_summits.bed.gz", "GSM4565993_macs2_me3_34P1P_d1_2.bam_peaks.broadPeak.gz", "GSM4566034_macs2_k4_SP8P_d2_43.bam_summits.bed.gz", "GSM4566023_macs2_k4_SP8P_d1_32.bam_summits.bed.gz", "GSM4565999_macs2_me3_SP8P_d1_8.bam_peaks.broadPeak.gz", "GSM4566057_macs2_ac_gd1M_d2_66.bam_summits.bed.gz", "GSM4566008_macs2_me3_DP3P_d2_18.bam_peaks.broadPeak.gz", "GSM4566046_macs2_ac_gd1M_d1_55.bam_summits.bed.gz", "GSM4566055_macs2_ac_SP4P_d2_64.bam_summits.bed.gz", "GSM4566018_macs2_k4_34P4P_d1_27.bam_summits.bed.gz", "GSM4565996_macs2_me3_DP3P_d1_6.bam_peaks.broadPeak.gz", "GSM4566019_macs2_k4_DP3M_d1_29.bam_summits.bed.gz", "GSM4566056_macs2_ac_SP8P_d2_65.bam_summits.bed.gz", "GSM4566031_macs2_k4_DP3P_d2_41.bam_summits.bed.gz", "GSM4565992_macs2_me3_34P1M_d1_1.bam_peaks.broadPeak.gz", "GSM4566024_macs2_k4_gd1M_d1_33.bam_summits.bed.gz", "GSM4565994_macs2_me3_34P4P_d1_3.bam_peaks.broadPeak.gz", "GSM4566054_macs2_ac_ISP_d2_61.bam_summits.bed.gz", "GSM4566032_macs2_k4_ISP_d2_39.bam_summits.bed.gz", "GSM4566044_macs2_ac_SP4P_d1_53.bam_summits.bed.gz", "GSM4566009_macs2_me3_ISP_d2_16.bam_peaks.broadPeak.gz", "GSM4566017_macs2_k4_34P1P_d1_26.bam_summits.bed.gz", "GSM4566016_macs2_k4_34P1M_d1_25.bam_summits.bed.gz", "GSM4566053_macs2_ac_DP3P_d2_63.bam_summits.bed.gz", "GSM4566038_macs2_ac_34P1M_d1_47.bam_summits.bed.gz", "GSM4566012_macs2_me3_gd1M_d2_21.bam_peaks.broadPeak.gz", "GSM4566051_macs2_ac_34P4P_d2_60.bam_summits.bed.gz", "GSM4566041_macs2_ac_DP3M_d1_51.bam_summits.bed.gz", "GSM4566028_macs2_k4_34P1P_d2_37.bam_summits.bed.gz", "GSM4565995_macs2_me3_DP3M_d1_5.bam_peaks.broadPeak.gz", "GSM4566013_macs2_me3_gd1P_d2_22.bam_peaks.broadPeak.gz", "GSM4566033_macs2_k4_SP4P_d2_42.bam_summits.bed.gz", "GSM4566045_macs2_ac_SP8P_d1_54.bam_summits.bed.gz", "GSM4566040_macs2_ac_34P4P_d1_49.bam_summits.bed.gz", "GSM4566022_macs2_k4_SP4P_d1_31.bam_summits.bed.gz", "GSM4566004_macs2_me3_34P1M_d2_13.bam_peaks.broadPeak.gz", "GSM4566006_macs2_me3_34P4P_d2_15.bam_peaks.broadPeak.gz", "GSM4565997_macs2_me3_ISP_d1_4.bam_peaks.broadPeak.gz", "GSM4566005_macs2_me3_34P1P_d2_14.bam_peaks.broadPeak.gz", "GSM4566052_macs2_ac_DP3M_d2_62.bam_summits.bed.gz", "GSM4566035_macs2_k4_gd1M_d2_44.bam_summits.bed.gz", "GSM4566047_macs2_ac_gd1P_d1_56.bam_summits.bed.gz", "GSM4566039_macs2_ac_34P1P_d1_48.bam_summits.bed.gz", "GSM4566020_macs2_k4_DP3P_d1_30.bam_summits.bed.gz", "GSM4566029_macs2_k4_34P4P_d2_38.bam_summits.bed.gz", "GSM4566030_macs2_k4_DP3M_d2_40.bam_summits.bed.gz", "GSM4566000_macs2_me3_gd1P_d1_10.bam_peaks.broadPeak.gz", "GSM4566049_macs2_ac_34P1M_d2_58.bam_summits.bed.gz", "GSM4566050_macs2_ac_34P1P_d2_59.bam_summits.bed.gz", "GSM4565998_macs2_me3_SP4P_d1_7.bam_peaks.broadPeak.gz", "GSM4566021_macs2_k4_ISP_d1_28.bam_summits.bed.gz", "GSM4566025_macs2_k4_gd1P_d1_34.bam_summits.bed.gz", "GSM4566007_macs2_me3_DP3M_d2_17.bam_peaks.broadPeak.gz", "GSM4566010_macs2_me3_SP4P_d2_19.bam_peaks.broadPeak.gz", "GSM4566043_macs2_ac_ISP_d1_50.bam_summits.bed.gz", "GSM4566001_macs2_me3_gd1M_d1_9.bam_peaks.broadPeak.gz", "GSM4566058_macs2_ac_gd1P_d2_67.bam_summits.bed.gz"], "cord blood CD34+": ["GSM4566014_macs2_me3_CB_d2_23.bam_peaks.broadPeak.gz", "GSM4566002_macs2_me3_CB_d1_11.bam_peaks.broadPeak.gz", "GSM4566026_macs2_k4_CB_d1_35.bam_summits.bed.gz", "GSM4566059_macs2_ac_CB_d2_68.bam_summits.bed.gz", "GSM4566048_macs2_ac_CB_d1_57.bam_summits.bed.gz", "GSM4566037_macs2_k4_CB_d2_46.bam_summits.bed.gz"], "immortalized myotubes": ["GSM4644417_HC_Bruseq.fragmentspergene.counts.bed.gz", "GSM4644418_DMD_Bruseq.fragmentspergene.counts.bed.gz"], "Bone": ["GSM4498738_U2OS_M_phase_plus_Aphidicolin_replicate_3.bed.gz", "GSM4498737_U2OS_M_phase_plus_Aphidicolin_replicate_2.bed.gz", "GSM4498749_U2OS_plus_Aphidicolin_CNV.bed.gz", "GSM4498736_U2OS_M_phase_plus_Aphidicolin_replicate_1.bed.gz"], "Cervix": ["GSM4498744_HeLa_M_phase_plus_Aphidicolin.bed.gz"], "Bronchus": ["GSM4498746_HBE_M_phase_plus_Aphidicolin.bed.gz"], "Umbilical cord blood": ["GSM4079461_ATAC_Cord_d16_rep2.bed.gz", "GSM4079460_ATAC_Cord_d16_rep1.bed.gz", "GSM4079458_ATAC_Cord_d12_rep1.bed.gz", "GSM4079462_ATAC_Cord_d8_rep1.bed.gz", "GSM4079457_ATAC_Cord_d10_rep2.bed.gz", "GSM4079456_ATAC_Cord_d10_rep1.bed.gz", "GSM4079459_ATAC_Cord_d12_rep2.bed.gz"], "medium spiny neuron-like": ["GSM4289915_25iCTR18n2_ATAC_MSN_rep2.fastq.bed.gz", "GSM4289914_25iCTR18n2_ATAC_MSN_rep1.fastq.bed.gz", "GSM4289911_04iHD46n10_ATAC_MSN_rep2.fastq.bed.gz", "GSM4289916_25iCTR18n6_ATAC_MSN_rep1.fastq.bed.gz", "GSM4289910_04iHD46n10_ATAC_MSN_rep1.fastq.bed.gz", "GSM4289913_14iCTR28n6_ATAC_MSN_rep2.fastq.bed.gz", "GSM4289918_83iCTR33n1_ATAC_MSN_rep1.fastq.bed.gz", "GSM4289917_25iCTR18n6_ATAC_MSN_rep2.fastq.bed.gz", "GSM4289909_03iHD53n3_ATAC_MSN_rep2.fastq.bed.gz", "GSM4289919_83iCTR33n1_ATAC_MSN_rep2.fastq.bed.gz", "GSM4289912_14iCTR28n6_ATAC_MSN_rep1.fastq.bed.gz", "GSM4289908_03iHD53n3_ATAC_MSN_rep1.fastq.bed.gz"], "peripheral blood": ["GSM4210413_CD3.T.cells_9927_2.narrowPeak.gz", "GSM4210411_CD3.T.cells_DMSO_3.narrowPeak.gz", "GSM4210409_CD3.T.cells_DMSO_1.narrowPeak.gz", "GSM4210412_CD3.T.cells_9927_1.narrowPeak.gz", "GSM4210414_CD3.T.cells_9927_3.narrowPeak.gz", "GSM4210410_CD3.T.cells_DMSO_2.narrowPeak.gz"], "adenosquamous cancer of the pancreas (ASCP) tumor": ["GSM4262008_PAX217.peaks.bed.gz", "GSM4262007_PAX139.peaks.bed.gz", "GSM4262009_PAX265.peaks.bed.gz"], "pancreatic ductal adenocarcinoma (PDAC)": ["GSM4262010_PAX295.peaks.bed.gz", "GSM4262012_PAX300.peaks.bed.gz", "GSM4262011_PAX297.peaks.bed.gz"], "brain prefrontal cortex region tissues": ["GSM3692195_C31B.2_peaks.broadPeak.gz", "GSM3692192_C23B.2_peaks.broadPeak.gz", "GSM3692189_aD7.2_peaks.broadPeak.gz", "GSM3692156_2017025-atf4_peaks.narrowPeak.gz", "GSM3692166_2017014_olig2_peaks.narrowPeak.gz", "GSM3692176_ad7-thra1_peaks.narrowPeak.gz", "GSM3692158_201704_atf4_peaks.narrowPeak.gz", "GSM3692170_2018001-olig2_peaks.narrowPeak.gz", "GSM3692164_2016029_olig2_peaks.narrowPeak.gz", "GSM3692186_aD18.2_peaks.broadPeak.gz", "GSM3692171_2018006-olig2_peaks.narrowPeak.gz", "GSM3692163_2016018_olig2_peaks.narrowPeak.gz", "GSM3692161_20134_olig2_peaks.narrowPeak.gz", "GSM3692160_2018006-atf4_peaks.narrowPeak.gz", "GSM3692179_c31-thra1_peaks.narrowPeak.gz", "GSM3692194_C31.2_peaks.broadPeak.gz", "GSM3692173_ad11-thra1_peaks.narrowPeak.gz", "GSM3692187_aD2.2_peaks.broadPeak.gz", "GSM3692151_2016018_atf4_peaks.narrowPeak.gz", "GSM3692174_ad16-thra1_peaks.narrowPeak.gz", "GSM3692184_aD11.2_peaks.broadPeak.gz", "GSM3692188_aD21.2_peaks.broadPeak.gz", "GSM3692154_2017011_atf4_peaks.narrowPeak.gz", "GSM3692149_20134_atf4_peaks.narrowPeak.gz", "GSM3692162_20138_olig2_peaks.narrowPeak.gz", "GSM3692165_2017011_olig2_peaks.narrowPeak.gz", "GSM3692177_c13-thra1_peaks.narrowPeak.gz", "GSM3692155_2017014_atf4_peaks.narrowPeak.gz", "GSM3692168_2017039-olig2_peaks.narrowPeak.gz", "GSM3692167_2017025-olig2_peaks.narrowPeak.gz", "GSM3692169_201704_olig2_peaks.narrowPeak.gz", "GSM3692185_aD16.2_peaks.broadPeak.gz", "GSM3692172_20180807-thra1_peaks.narrowPeak.gz", "GSM3692157_2017039-atf4_peaks.narrowPeak.gz", "GSM3692152_2016029_atf4_peaks.narrowPeak.gz", "GSM3692190_C13.2_peaks.broadPeak.gz", "GSM3692193_C25.2_peaks.broadPeak.gz", "GSM3692175_ad1-thra1_peaks.narrowPeak.gz", "GSM3692191_C13B.2_peaks.broadPeak.gz", "GSM3692153_2017001_atf4_peaks.narrowPeak.gz", "GSM3692178_c23-thra1_peaks.narrowPeak.gz", "GSM3692159_2018001-atf4_peaks.narrowPeak.gz", "GSM3692150_20138_atf4_peaks.narrowPeak.gz"], "cell line established from a metastatic GIST": ["GSM3376521_t1_cellline_CTCF_t11_fp-stylefactor_hg38.bed.gz"], "Metastatic GIST": ["GSM3376527_KIT1_H3K27ac_102_fp-stylesuper-L0_hg38.bed.gz", "GSM3376550_KIT7_H3K27ac_1286912_fp-stylesuper-L0_hg38.bed.gz", "GSM3376535_KIT3_H3K27ac_452_fp-stylesuper-L0_hg38.bed.gz", "GSM3376594_s6_CTCF_35701_fp-stylefactor_hg38.bed.gz", "GSM3376546_KIT6_CTCF_1468921_fp-stylefactor_hg38.bed.gz", "GSM3376550_KIT7_H3K27ac_1286912_fp-stylehistone_hg38.bed.gz", "GSM3376595_s6_H3K27ac_35702_fp-stylehistone_hg38.bed.gz", "GSM3376526_KIT1_CTCF_101_fp-stylefactor_hg38.bed.gz", "GSM3376543_KIT5_H3K27ac_6322_fp-stylesuper-L0_hg38.bed.gz", "GSM3376542_KIT5_CTCF_631_fp-stylefactor_hg38.bed.gz", "GSM3376589_s5_CTCF_31701_fp-stylefactor_hg38.bed.gz", "GSM3377444_S2_H3K27ac_2123_fp-stylehistone_hg38.bed.gz", "GSM3377443_S2_CTCF_221_fp-stylefactor_hg38.bed.gz", "GSM3376538_KIT4_CTCF_541_fp-stylefactor_hg38.bed.gz", "GSM3377440_S1_H3K27ac_202_fp-stylehistone_hg38.bed.gz", "GSM3376561_KIT10_CTCF_171_fp-stylefactor_hg38.bed.gz", "GSM3377444_S2_H3K27ac_2123_fp-stylesuper-L0_hg38.bed.gz", "GSM3376543_KIT5_H3K27ac_6322_fp-stylehistone_hg38.bed.gz", "GSM3376535_KIT3_H3K27ac_452_fp-stylehistone_hg38.bed.gz", "GSM3376539_KIT4_H3K27ac_5423_fp-stylehistone_hg38.bed.gz", "GSM3377448_S3_H3K27ac_552_fp-stylesuper-L0_hg38.bed.gz", "GSM3376531_KIT2_H3K27ac_2722_fp-stylehistone_hg38.bed.gz", "GSM3376534_KIT3_CTCF_451_fp-stylefactor_hg38.bed.gz", "GSM3376530_KIT2_CTCF_271_fp-stylefactor_hg38.bed.gz", "GSM3377448_S3_H3K27ac_552_fp-stylehistone_hg38.bed.gz", "GSM3376531_KIT2_H3K27ac_2722_fp-stylesuper-L0_hg38.bed.gz", "GSM3376539_KIT4_H3K27ac_5423_fp-stylesuper-L0_hg38.bed.gz", "GSM3377447_S3_CTCF_551_fp-stylefactor_hg38.bed.gz", "GSM3376527_KIT1_H3K27ac_102_fp-stylehistone_hg38.bed.gz", "GSM3376595_s6_H3K27ac_35702_fp-stylesuper-L0_hg38.bed.gz", "GSM3377439_S1_CTCF_201_fp-stylefactor_hg38.bed.gz", "GSM3376590_s5_H3K27ac_31702_fp-stylehistone_hg38.bed.gz", "GSM3377440_S1_H3K27ac_202_fp-stylesuper-L0_hg38.bed.gz", "GSM3376590_s5_H3K27ac_31702_fp-stylesuper-L0_hg38.bed.gz", "GSM3376549_KIT7_CTCF_1286911_fp-stylefactor_hg38.bed.gz"], "Localized GIST": ["GSM3376578_PDGFRA1_H3K27ac_462_fp-stylehistone_hg38.bed.gz", "GSM3376564_KIT11_H3K27ac_145552_fp-stylesuper-L0_hg38.bed.gz", "GSM3376582_PDGFRA2_H3K27ac_94432_fp-stylehistone_hg38.bed.gz", "GSM3376581_PDGFRA2_CTCF_94431_fp-stylefactor_hg38.bed.gz", "GSM3377452_S4_H3K27ac_572_fp-stylehistone_hg38.bed.gz", "GSM3376577_PDGFRA1_CTCF_461_fp-stylefactor_hg38.bed.gz", "GSM3376578_PDGFRA1_H3K27ac_462_fp-stylesuper-L0_hg38.bed.gz", "GSM3376553_KIT8_CTCF_122331_fp-stylefactor_hg38.bed.gz", "GSM3376564_KIT11_H3K27ac_145552_fp-stylehistone_hg38.bed.gz", "GSM3376558_KIT9_H3K27ac_2882523_fp-stylesuper-L0_hg38.bed.gz", "GSM3376554_KIT8_H3K27ac_122332_fp-stylehistone_hg38.bed.gz", "GSM3376582_PDGFRA2_H3K27ac_94432_fp-stylesuper-L0_hg38.bed.gz", "GSM3376557_KIT9_CTCF_288251_fp-stylefactor_hg38.bed.gz", "GSM3376558_KIT9_H3K27ac_2882523_fp-stylehistone_hg38.bed.gz", "GSM3377452_S4_H3K27ac_572_fp-stylesuper-L0_hg38.bed.gz", "GSM3376563_KIT11_CTCF_145551_fp-stylefactor_hg38.bed.gz", "GSM3377451_S4_CTCF_571_fp-stylefactor_hg38.bed.gz", "GSM3376554_KIT8_H3K27ac_122332_fp-stylesuper-L0_hg38.bed.gz"], "Normal stomach muscle": ["GSM3376566_nsm1_CTCF_9271_fp-stylefactor_hg38.bed.gz", "GSM3376575_nsm4_CTCF_92161_fp-stylefactor_hg38.bed.gz", "GSM3376567_nsm1_H3K27ac_9272_fp-stylesuper-L0_hg38.bed.gz", "GSM3376570_nsm2_CTCF_92110_fp-stylefactor_hg38.bed.gz", "GSM3376567_nsm1_H3K27ac_9272_fp-stylehistone_hg38.bed.gz", "GSM3376573_nsm3_CTCF_92121_fp-stylefactor_hg38.bed.gz"], "glioma": ["GSM4119515_SF11949_snATAC_peaks.bed.gz", "GSM4119513_SF11964_snATAC_peaks.bed.gz", "GSM4119514_SF12017_snATAC_peaks.bed.gz", "GSM4119517_SF11979_snATAC_peaks.bed.gz", "GSM4119518_SF11956_snATAC_peaks.bed.gz", "GSM4119516_SF11612_snATAC_peaks.bed.gz", "GSM4119520_SF11331_peaks.bed.gz", "GSM4119519_SF11215_peaks.bed.gz"], "Bone marrow": ["GSM3316872_AML_P23_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316857_AML_P12_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316873_AML_P23_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316865_AML_P19_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316881_AML_P27_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316858_AML_P13_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316862_AML_P16_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316864_AML_P18_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316867_AML_P20_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316853_AML_P8_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316846_AML_P1_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316879_AML_P26_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316850_AML_P5_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316875_AML_P24_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316847_AML_P2_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316871_AML_P22_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316874_AML_P24_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316852_AML_P7_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316861_AML_P16_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316878_AML_P26_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316849_AML_P4_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316880_AML_P27_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316866_AML_P20_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316863_AML_P17_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316851_AML_P6_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316860_AML_P15_Dx_H3K27ac_peaks.narrowPeak.gz"], "Peripheral Blood": ["GSM3316855_AML_P10_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316869_AML_P21_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316854_AML_P9_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316856_AML_P11_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316877_AML_P25_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316848_AML_P3_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316868_AML_P21_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316859_AML_P14_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316870_AML_P22_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316876_AML_P25_Dx_H3K27ac_peaks.narrowPeak.gz"], "induced Pluripotent Stem Cells": ["GSM4059141_HE_rep3.bed.gz", "GSM4059143_HLC_rep2.bed.gz", "GSM4059139_HE_rep1.bed.gz", "GSM4059142_HLC_rep1.bed.gz", "GSM4059137_DE_rep2.bed.gz", "GSM4059140_HE_rep2.bed.gz", "GSM4059135_iPSC_CONTROL_rep3.bed.gz", "GSM4059138_DE_rep3.bed.gz", "GSM4059144_HLC_rep3.bed.gz", "GSM4059133_iPSC_CONTROL_rep1.bed.gz", "GSM4059134_iPSC_CONTROL_rep2.bed.gz", "GSM4059136_DE_rep1.bed.gz"], "human embryonic kidney cells": ["GSM4026856_VP7_interactions.bed.gz", "GSM4026859_VP10_interactions.bed.gz", "GSM4026855_VP6_interactions.bed.gz", "GSM4026858_VP9_interactions.bed.gz", "GSM4026857_VP8_interactions.bed.gz"], "transformed human embryonic kidney cells": ["GSM3151927_HEK293T.Cascade_HBE_crRNA.antiFlag.rep1.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151928_HEK293T.Cascade_HBE_crRNA.antiFlag.rep2.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151934_HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep2.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151929_HEK293T.Cascade_HBE_crRNA.antiFlag.rep3.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151935_HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep3.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151933_HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep1.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151939_HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep1.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151941_HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep3.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151940_HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep2.dedup.masked.sorted_peaks.narrowPeak.gz"], "primary glioblastoma": ["GSM3439943_G567_h3k27_ip_rep2_WRT_G567_h3k27_input_peaks.broadPeak.gz", "GSM3439939_G523_h3k27_ip_rep1_WRT_G523_h3k27_input_peaks.broadPeak.gz", "GSM3439940_G523_h3k27_ip_rep2_WRT_G523_h3k27_input_peaks.broadPeak.gz", "GSM3439930_G523_ctcf_ip_rep1_WRT_G523_ctcf_input_rep1_peaks.narrowPeak.gz", "GSM3439946_G583_h3k27_ip_rep2_WRT_G583_h3k27_input_rep1_peaks.broadPeak.gz", "GSM3439942_G567_h3k27_ip_rep1_WRT_G567_h3k27_input_peaks.broadPeak.gz", "GSM3439933_G567_ctcf_ip_rep1_WRT_G567_ctcf_input_rep1_peaks.narrowPeak.gz", "GSM3439931_G523_ctcf_ip_rep2_WRT_G523_ctcf_input_rep2_peaks.narrowPeak.gz", "GSM3439945_G583_h3k27_ip_rep1_WRT_G583_h3k27_input_rep1_peaks.broadPeak.gz", "GSM3439937_G583_ctcf_ip_rep2_WRT_G583_ctcf_input_rep1_peaks.narrowPeak.gz", "GSM3439936_G583_ctcf_ip_rep1_WRT_G583_ctcf_input_rep1_peaks.narrowPeak.gz", "GSM3439934_G567_ctcf_ip_rep2_WRT_G567_ctcf_input_rep1_peaks.narrowPeak.gz"], "left ventricle": ["GSM3605899_LV1400.replicated.broadPeak.gz", "GSM3605930_LV1392.replicated.broadPeak.gz", "GSM3605934_LV1437.replicated.broadPeak.gz", "GSM3605895_LV1325.replicated.broadPeak.gz", "GSM3605879_LV1200.replicated.broadPeak.gz", "GSM3605928_LV1371.replicated.broadPeak.gz", "GSM3605932_LV1433.replicated.broadPeak.gz", "GSM3605947_12570_LV_PCW17.replicated.broadPeak.gz", "GSM3605897_LV1356.replicated.broadPeak.gz", "GSM3605891_LV1277.replicated.broadPeak.gz", "GSM6202204_1155.replicated.broadPeak.gz", "GSM3605918_LV1264.replicated.broadPeak.gz", "GSM3605882_LV1215.replicated.broadPeak.gz", "GSM3605923_LV1300.replicated.broadPeak.gz", "GSM3605937_LV1535.replicated.broadPeak.gz", "GSM3605890_LV1273.replicated.broadPeak.gz", "GSM3605936_LV1532.replicated.broadPeak.gz", "GSM3605901_LV1452.replicated.broadPeak.gz", "GSM6202203_1137.replicated.broadPeak.gz", "GSM3605910_LV1033.replicated.broadPeak.gz", "GSM3605893_LV1294.replicated.broadPeak.gz", "GSM3605925_LV1304.replicated.broadPeak.gz", "GSM3605906_LV1009.replicated.broadPeak.gz", "GSM6202210_1310.replicated.broadPeak.gz", "GSM3605912_LV1072.replicated.broadPeak.gz", "GSM3605919_LV1275.replicated.broadPeak.gz", "GSM6202206_1173.replicated.broadPeak.gz", "GSM6202209_1224.replicated.broadPeak.gz", "GSM3605873_LV1121.replicated.broadPeak.gz", "GSM3605908_LV1028.replicated.broadPeak.gz", "GSM3605877_LV1183.replicated.broadPeak.gz", "GSM3605875_LV1160.replicated.broadPeak.gz", "GSM3605927_LV1342.replicated.broadPeak.gz", "GSM6202208_1211.replicated.broadPeak.gz", "GSM3605884_LV1226.replicated.broadPeak.gz", "GSM3605914_LV1223.replicated.broadPeak.gz", "GSM3605888_LV1259.replicated.broadPeak.gz", "GSM6202207_1205.replicated.broadPeak.gz", "GSM3605921_LV1290.replicated.broadPeak.gz", "GSM6202205_1167.replicated.broadPeak.gz", "GSM3605880_LV1202.replicated.broadPeak.gz", "GSM3605904_LV1558.replicated.broadPeak.gz", "GSM3605916_LV1262.replicated.broadPeak.gz", "GSM3605903_LV1471.replicated.broadPeak.gz", "GSM3605886_LV1248.replicated.broadPeak.gz"], "heart": ["GSM3605941_12434_PCW10.replicated.broadPeak.gz", "GSM3605943_12522_PCW10.replicated.broadPeak.gz", "GSM3605945_12569_PCW10.replicated.broadPeak.gz", "GSM3605939_11963_CS22.replicated.broadPeak.gz"], "Human breast adenocarcinoma": ["GSM3440915_shKDM4B_H3K9me3_ChIPSeq_peaks.bed.gz", "GSM3440916_KDM4B_H3K9me3_ChIPSeq_peaks.bed.gz", "GSM3440914_WT_H3K9me3_ChIPSeq_peaks.bed.gz"], "A549 cell line": ["GSM3204806_NEB_32ug_peaks_sorted_named.bed.gz", "GSM3204808_Millipore_12ug_peaks_sorted_named.bed.gz", "GSM3204811_Millipore_500ng_peaks_sorted_named_Rep1.bed.gz", "GSM3204813_Millipore_500ng_peaks_sorted_named_Rep2.bed.gz", "GSM3204805_Synaptic_32ug_peaks_sorted_named.bed.gz", "GSM3204810_Millipore_2ug_peaks_sorted_named.bed.gz", "GSM3204809_Millipore_6ug_peaks_sorted_named.bed.gz", "GSM3204807_Millipore_32ug_peaks_sorted_named.bed.gz"], "Lung Adenocarcinorma Primary Tumor": ["GSM3204815_tumor1_peaks_sorted_named.bed.gz", "GSM3204817_tumor2_peaks_sorted_named.bed.gz"], "Whole Fetal Heart": ["GSM2845457_Fetal_Heart_Rep2_500KB.bins.bed.gz", "GSM2845456_Fetal_Heart_Rep1_500KB.bins.bed.gz"], "peripheral blood, Human Chronic Lymphocytic Leukemia": ["GSM2059331_HTGTS_MEC1.Ibrutinib.C1_1.bed.gz", "GSM2059322_HTGTS_MEC1.DMSO.C2_2.bed.gz", "GSM2059330_HTGTS_MEC1.Duvelisib.C2_4.bed.gz", "GSM2059327_HTGTS_MEC1.Duvelisib.C1_1.bed.gz", "GSM2430310_HTGTS_MEC1.KO-Idelalisib.C1_1.bed.gz", "GSM2059326_HTGTS_MEC1.Idelalisib.C2_4.bed.gz", "GSM2059329_HTGTS_MEC1.Duvelisib.C2_3.bed.gz", "GSM2059333_HTGTS_MEC1.Ibrutinib.C3_3.bed.gz", "GSM2059323_HTGTS_MEC1.Idelalisib.C1_1.bed.gz", "GSM2430309_HTGTS_MEC1.KO-DMSO.C2_3.bed.gz", "GSM2430315_HTGTS_MEC1.KO-Duvelisib.C2_3.bed.gz", "GSM2430305_HTGTS_MEC1.Duvelisib.C1_5.bed.gz", "GSM2059332_HTGTS_MEC1.Ibrutinib.C1_2.bed.gz", "GSM2430311_HTGTS_MEC1.KO-Idelalisib.C1_2.bed.gz", "GSM2059324_HTGTS_MEC1.Idelalisib.C1_2.bed.gz", "GSM2059325_HTGTS_MEC1.Idelalisib.C2_3.bed.gz", "GSM2430312_HTGTS_MEC1.KO-Idelalisib.C2_3.bed.gz", "GSM2430306_HTGTS_MEC1.Duvelisib.C2_6.bed.gz", "GSM2059328_HTGTS_MEC1.Duvelisib.C1_2.bed.gz", "GSM2059334_HTGTS_MEC1.Ibrutinib.C2_4.bed.gz", "GSM2430313_HTGTS_MEC1.KO-Duvelisib.C1_1.bed.gz", "GSM2430307_HTGTS_MEC1.KO-DMSO.C1_1.bed.gz", "GSM2430314_HTGTS_MEC1.KO-Duvelisib.C1_2.bed.gz", "GSM2059321_HTGTS_MEC1.DMSO.C1_1.bed.gz", "GSM2430308_HTGTS_MEC1.KO-DMSO.C1_2.bed.gz"], "peripheral blood, Mantle Cell Lymphoma": ["GSM2059343_HTGTS_JeKo-1.Idelalisib.C2_5.bed.gz", "GSM2059341_HTGTS_JeKo-1.Idelalisib.C2_3.bed.gz", "GSM2059337_HTGTS_JeKo-1.DMSO.C2_3.bed.gz", "GSM2059349_HTGTS_JeKo-1.Duvelisib.C2_5.bed.gz", "GSM2059352_HTGTS_JeKo-1.Ibrutinib.C2_3.bed.gz", "GSM2059335_HTGTS_JeKo-1.DMSO.C1_1.bed.gz", "GSM2059342_HTGTS_JeKo-1.Idelalisib.C2_4.bed.gz", "GSM2059339_HTGTS_JeKo-1.Idelalisib.C1_1.bed.gz", "GSM2059344_HTGTS_JeKo-1.Idelalisib.C2_6.bed.gz", "GSM2059347_HTGTS_JeKo-1.Duvelisib.C2_3.bed.gz", "GSM2059346_HTGTS_JeKo-1.Duvelisib.C1_2.bed.gz", "GSM2059348_HTGTS_JeKo-1.Duvelisib.C2_4.bed.gz", "GSM2059350_HTGTS_JeKo-1.Ibrutinib.C1_1.bed.gz", "GSM2059340_HTGTS_JeKo-1.Idelalisib.C1_2.bed.gz", "GSM2059338_HTGTS_JeKo-1.DMSO.C2_4.bed.gz", "GSM2059345_HTGTS_JeKo-1.Duvelisib.C1_1.bed.gz", "GSM2059336_HTGTS_JeKo-1.DMSO.C1-2_1.bed.gz", "GSM2059351_HTGTS_JeKo-1.Ibrutinib.C1_2.bed.gz"]}, "sample_title": {"control [N01]": ["GSM5973976_N01.peaks.filtered.bed.gz"], "control [N03]": ["GSM5973977_N03.peaks.filtered.bed.gz"], "control [N04]": ["GSM5973978_N04.peaks.filtered.bed.gz"], "patient with superimposed preeclampsia [P02]": ["GSM5973979_P02.peaks.filtered.bed.gz"], "human PB NK cells RUNX2 ChIP": ["GSM5255997_NK_RUNX2_peaks.narrowPeak.gz"], "ACTL6A SNU638": ["GSM6203247_snu638.peak.bed.gz"], "Fetal_H3K27ac_r1": ["GSM5530945_3434_peaks_clean.bed.gz"], "Fetal_H3K27ac_r2": ["GSM5530946_3442_peaks_clean.bed.gz"], "Adult_H3K27ac_r1": ["GSM5530947_3419_peaks_clean.bed.gz"], "Adult_H3K27ac_r2": ["GSM5530948_3426_peaks_clean.bed.gz"], "Fetal_GATA1_r1": ["GSM5530949_3429_peaks_clean.bed.gz"], "Fetal_GATA1_r2": ["GSM5530950_3437_peaks_clean.bed.gz"], "Adult_GATA1_r1": ["GSM5530951_3415_peaks_clean.bed.gz"], "Adult_GATA1_r2": ["GSM5530952_3422_peaks_clean.bed.gz"], "ChIP-Seq HUDEP2 cells WT GATA1 ChIP-seq rep1": ["GSM5271205_3133_peaks_clean.bed.gz"], "ChIP-Seq HUDEP2 cells WT GATA1 ChIP-seq rep2": ["GSM5271206_3134_peaks_clean.bed.gz"], "ChIP-Seq HUDEP2 cells WT H3K27ac ChIP-seq": ["GSM5271207_3278_peaks_clean.bed.gz"], "ChIP-Seq HUDEP2 cells HIC2-OE GATA1 ChIP-seq rep1": ["GSM5271209_3139_peaks_clean.bed.gz"], "ChIP-Seq HUDEP2 cells HIC2-OE GATA1 ChIP-seq rep2": ["GSM5271210_3140_peaks_clean.bed.gz"], "ChIP-Seq HUDEP2 cells HIC2-OE H3K27ac ChIP-seq": ["GSM5271211_3279_peaks_clean.bed.gz"], "ChIP-Seq HUDEP2 cells HIC2-ER uninduced HA ChIP-seq rep1": ["GSM5271213_3324_peaks_clean.bed.gz"], "ChIP-Seq HUDEP2 cells HIC2-ER uninduced HA ChIP-seq rep2": ["GSM5271214_3325_peaks_clean.bed.gz"], "ChIP-Seq HUDEP2 cells HIC2-ER induced HA ChIP-seq rep1": ["GSM5271216_3326_peaks_clean.bed.gz"], "ChIP-Seq HUDEP2 cells HIC2-ER induced HA ChIP-seq rep2": ["GSM5271217_3327_peaks_clean.bed.gz"], "ChIP-Seq HUDEP1 cells WT GATA1 ChIP-seq rep1": ["GSM5271219_3283_peaks_clean.bed.gz"], "ChIP-Seq HUDEP1 cells WT GATA1 ChIP-seq rep2": ["GSM5271220_3284_peaks_clean.bed.gz"], "ChIP-Seq HUDEP1 cells HIC2 KO GATA1 ChIP-seq rep1": ["GSM5271222_3286_peaks_clean.bed.gz"], "ChIP-Seq HUDEP1 cells HIC2 KO GATA1 ChIP-seq rep2": ["GSM5271223_3287_peaks_clean.bed.gz"], "ChIP-Seq Newborn erythroblasts HIC2": ["GSM5800046_3890_peaks_clean.bed.gz"], "siCtrl, E2, ER, Rep 1 [CE-ER1]": ["GSM6125838_CE-ER_merge.bed.gz"], "siCtrl, E2, GRHL2, Rep 1 [CE-G1]": ["GSM6125841_CE-G_merge.bed.gz"], "siCtrl, E2, Santa Cruz pS118-ER, Rep 1 [CE-SC1]": ["GSM6125844_CE-SC_merge.bed.gz"], "siCtrl, Veh, ER, Rep 1 [CV-ER1]": ["GSM6125846_CV-ER_merge.bed.gz"], "siCtrl, Veh, GRHL2, Rep 1 [CV-G1]": ["GSM6125849_CV-G_merge.bed.gz"], "siCtrl, Veh, IgG, Rep 1 [CV-IgG1]": ["GSM6125855_CV-IgG_merge.bed.gz"], "siCtrl, E2, Santa Cruz pS118-ER, Rep 1 [CV-SC1]": ["GSM6125858_CV-SC_merge.bed.gz"], "siGRHL2, E2, ER, Rep 1 [GE-ER1]": ["GSM6125860_GE-ER_merge.bed.gz"], "siGRHL2, E2, GRHL2, Rep 1 [GE-G1]": ["GSM6125863_GE-G_merge.bed.gz"], "siGRHL2, E2, Santa Cruz pS118-ER, Rep 1 [GE-SC1]": ["GSM6125866_GE-SC_merge.bed.gz"], "siGRHL2, Veh, ER, Rep 1 [GV-ER1]": ["GSM6125868_GV-ER_merge.bed.gz"], "siGRHL2, Veh, GRHL2, Rep 1 [GV-G1]": ["GSM6125871_GV-G_merge.bed.gz"], "siGRHL2, Veh, Santa Cruz pS118-ER, Rep 1 [GV-SC1]": ["GSM6125874_GV-SC_merge.bed.gz"], "S118A mut 1, E2, GRHL2, Rep 1 [s118a-1_EG-1]": ["GSM6125877_s118a-1_EG-1_S188.bed.gz"], "S118A mut 1, E2, GRHL2, Rep 2 [s118a-1_EG-2]": ["GSM6125878_s118a-1_EG-2_S189.bed.gz"], "S118A mut 1, E2, GRHL2, Rep 3 [s118a-1_EG-3]": ["GSM6125879_s118a-1_EG-3_S190.bed.gz"], "S118A mut 1, Veh, GRHL2, Rep 1 [s118a-1_VG-1]": ["GSM6125880_s118a-1_VG-1_S191.bed.gz"], "S118A mut 1, Veh, GRHL2, Rep 2 [s118a-1_VG-2]": ["GSM6125881_s118a-1_VG-2_S192.bed.gz"], "S118A mut 1, Veh, GRHL2, Rep 3 [s118a-1_VG-3]": ["GSM6125882_s118a-1_VG-3_S193.bed.gz"], "S118A mut 2, E2, GRHL2, Rep 1 [s118a-2_EG-1]": ["GSM6125883_s118a-2_EG-1_S194.bed.gz"], "S118A mut 2, E2, GRHL2, Rep 2 [s118a-2_EG-2]": ["GSM6125884_s118a-2_EG-2_S195.bed.gz"], "S118A mut 2, E2, GRHL2, Rep 3 [s118a-2_EG-3]": ["GSM6125885_s118a-2_EG-3_S196.bed.gz"], "S118A mut 2, Veh, GRHL2, Rep 1 [s118a-2_VG-1]": ["GSM6125886_s118a-2_VG-1_S197.bed.gz"], "S118A mut 2, Veh, GRHL2, Rep 2 [s118a-2_VG-2]": ["GSM6125887_s118a-2_VG-2_S198.bed.gz"], "S118A mut 2, Veh, GRHL2, Rep 3 [s118a-2_VG-3]": ["GSM6125888_s118a-2_VG-3_S199.bed.gz"], "Wild Type, E2, GRHL2, Rep 1 [WT_EG-1]": ["GSM6125889_WT_EG-1_S201.bed.gz"], "Wild Type, E2, GRHL2, Rep 2 [WT_EG-2]": ["GSM6125890_WT_EG-2_S202.bed.gz"], "Wild Type, E2, GRHL2, Rep 3 [WT_EG-3]": ["GSM6125891_WT_EG-3_S203.bed.gz"], "Wild Type, Veh, GRHL2, Rep 1 [WT_VG-1]": ["GSM6125892_WT_VG-1_S204.bed.gz"], "Wild Type, Veh, GRHL2, Rep 2 [WT_VG-2]": ["GSM6125893_WT_VG-2_S205.bed.gz"], "Wild Type, Veh, GRHL2, Rep 3 [WT_VG-3]": ["GSM6125894_WT_VG-3_S206.bed.gz"], "A-BRD7": ["GSM6131565_ANBRD7VSANINPUT_peaks.narrowPeak.gz"], "A+BRD7": ["GSM6131567_APBRD7VSAPINPUT_peaks.narrowPeak.gz"], "CD14+ Monocytes-Resting-ATAC-Donor1": ["GSM5513653_step3.4_peakcall_Rest-D3.R1_peaks.narrowPeak.gz"], "CD14+ Monocytes-Resting-ATAC-Donor2": ["GSM5513654_step3.4_peakcall_Rest-D4.R1_peaks.narrowPeak.gz"], "CD14+ Monocytes-Resting-ATAC-Donor3": ["GSM5513655_step3.4_peakcall_Rest-D5.R1_peaks.narrowPeak.gz"], "CD14+ Monocytes-CXCL4-ATAC-Donor1": ["GSM5513656_step3.4_peakcall_CXCL4-D3.R1_peaks.narrowPeak.gz"], "CD14+ Monocytes-CXCL4-ATAC-Donor2": ["GSM5513657_step3.4_peakcall_CXCL4-D4.R1_peaks.narrowPeak.gz"], "CD14+ Monocytes-CXCL4ATAC-Donor3": ["GSM5513658_step3.4_peakcall_CXCL4-D5.R1_peaks.narrowPeak.gz"], "CD14+ Monocytes-ORN8L-ATAC-Donor1": ["GSM5513659_step3.4_peakcall_ORN8L-D3.R1_peaks.narrowPeak.gz"], "CD14+ Monocytes-ORN8L-ATAC-Donor2": ["GSM5513660_step3.4_peakcall_ORN8L-D4.R1_peaks.narrowPeak.gz"], "CD14+ Monocytes-ORN8L-ATAC-Donor3": ["GSM5513661_step3.4_peakcall_ORN8L-D5.R1_peaks.narrowPeak.gz"], "CD14+ Monocytes-ORN8L+CXCL4-ATAC-Donor1": ["GSM5513662_step3.4_peakcall_CXCL4andORN8L-D3.R1_peaks.narrowPeak.gz"], "CD14+ Monocytes-ORN8L+CXCL4-ATAC-Donor2": ["GSM5513663_step3.4_peakcall_CXCL4andORN8L-D4.R1_peaks.narrowPeak.gz"], "CD14+ Monocytes-ORN8L+CXCL4-ATAC-Donor3": ["GSM5513664_step3.4_peakcall_CXCL4andORN8L-D5.R1_peaks.narrowPeak.gz"], "ChIPseq_MCF7_CBP_Ctrl": ["GSM5373114_MCF7_CBP_Ctrl.bed.gz"], "ChIPseq_MCF7_CBP_E2": ["GSM5373115_MCF7_CBP_E2.bed.gz"], "ChIPseq_MCF7_AFF4_Ctrl": ["GSM5373116_MCF7_AFF4_Ctrl.bed.gz"], "ChIPseq_MCF7_AFF4_E2": ["GSM5373117_MCF7_AFF4_E2.bed.gz"], "ChIPseq_MCF7_CTCF_Ctrl": ["GSM5373118_MCF7_CTCF_Ctrl.bed.gz"], "ChIPseq_MCF7_CTCF_E2": ["GSM5373119_MCF7_CTCF_E2.bed.gz"], "ChIPseq_MCF7_Mau2_Ctrl": ["GSM5373120_MCF7_Mau2_Ctrl.bed.gz"], "ChIPseq_MCF7_Mau2_E2": ["GSM5373121_MCF7_Mau2_E2.bed.gz"], "ChIPseq_MCF7_Pol2_Ctrl": ["GSM5373122_MCF7_Pol2_Ctrl.bed.gz"], "ChIPseq_MCF7_Pol2_E2_30min": ["GSM5373123_MCF7_Pol2_E2_30min.bed.gz"], "ChIPseq_MCF7_Pol2_E2_45min": ["GSM5373124_MCF7_Pol2_E2_45min.bed.gz"], "ChIPseq_MCF7_Pol2ser2_Ctrl": ["GSM5373125_MCF7_Pol2ser2_Ctrl.bed.gz"], "ChIPseq_MCF7_Pol2ser2_E2": ["GSM5373126_MCF7_Pol2ser2_E2.bed.gz"], "ChIPseq_MCF7_Rad21_Ctrl": ["GSM5373127_MCF7_Rad21_Ctrl.bed.gz"], "ChIPseq_MCF7_Rad21_E2_30min": ["GSM5373128_MCF7_Rad21_E2_30min.bed.gz"], "ChIPseq_MCF7_Rad21_E2_45min": ["GSM5373129_MCF7_Rad21_E2_45min.bed.gz"], "ChIPseq_MCF7_TAF1_Ctrl": ["GSM5373130_MCF7_TAF1_Ctrl.bed.gz"], "ChIPseq_MCF7_TAF1_E2": ["GSM5373131_MCF7_TAF1_E2.bed.gz"], "ChIPseq_MCF7_p300_Ctrl": ["GSM5373132_MCF7_p300_Ctrl.bed.gz"], "ChIPseq_MCF7_p300_E2": ["GSM5373133_MCF7_p300_E2.bed.gz"], "ChIPseq_MCF7_Mau2_KD_Ctrl": ["GSM5373137_MCF7_Mau2_KD_Ctrl.bed.gz"], "ChIPseq_MCF7_Mau2_KD_E2": ["GSM5373138_MCF7_Mau2_KD_E2.bed.gz"], "ChIPseq_MCF7_p300_KD_Ctrl": ["GSM5373139_MCF7_p300_KD_Ctrl.bed.gz"], "ChIPseq_MCF7_p300_KD_E2": ["GSM5373140_MCF7_p300_KD_E2.bed.gz"], "ChIPseq_MCF7_Pol2_KD_Ctrl": ["GSM5373141_MCF7_Pol2_KD_Ctrl.bed.gz"], "ChIPseq_MCF7_Pol2_KD_E2": ["GSM5373142_MCF7_Pol2_KD_E2.bed.gz"], "ChIPseq_MCF7_Pol2ser2_KD_Ctrl": ["GSM5373143_MCF7_Pol2ser2_KD_Ctrl.bed.gz"], "ChIPseq_MCF7_Pol2ser2_KD_E2": ["GSM5373144_MCF7_Pol2ser2_KD_E2.bed.gz"], "ChIPseq_MCF7_CBP_KD_Ctrl": ["GSM5373145_MCF7_CBP_KD_Ctrl.bed.gz"], "ChIPseq_MCF7_CBP_KD_E2": ["GSM5373146_MCF7_CBP_KD_E2.bed.gz"], "ChIPseq_MCF7_ER_Ctrl": ["GSM5373147_MCF7_ER_Ctrl.bed.gz"], "ChIPseq_MCF7_ER_E2": ["GSM5373148_MCF7_ER_E2.bed.gz"], "ChIPseq_293T_Rad21_WT": ["GSM5373149_293T_Rad21_WT.bed.gz"], "ChIPseq_Bcell_Rad21_WT": ["GSM5373150_Bcell_Rad21_WT.bed.gz"], "ChIPseq_Fibroblast_Rad21_WT": ["GSM5373151_Fibroblast_Rad21_WT.bed.gz"], "ChIPseq_RPE_Rad21_WT": ["GSM5373152_RPE_Rad21_WT.bed.gz"], "ChIPseq_HeLa_Rad21_WT_rep1": ["GSM5373153_HeLa_Rad21_WT_rep1.bed.gz"], "ChIPseq_HeLa_Rad21_WT_rep2": ["GSM5373154_HeLa_Rad21_WT_rep2.bed.gz"], "ChIPseq_RPE_Rad21_FBS-": ["GSM5373155_RPE_Rad21_FBS-.bed.gz"], "ChIPseq_RPE_Rad21_FBS+": ["GSM5373156_RPE_Rad21_FBS+.bed.gz"], "ChIPseq_RPE_Rad21_DRB-": ["GSM5373157_RPE_Rad21_DRB-.bed.gz"], "ChIPseq_RPE_Rad21_DRB+": ["GSM5373158_RPE_Rad21_DRB+.bed.gz"], "ChIPseq_RPE_Rad21_FBS+DRB": ["GSM5373159_RPE_Rad21_FBS+DRB.bed.gz"], "ChIPseq_RPE_SA1_FBS-": ["GSM5373160_RPE_SA1_FBS-.bed.gz"], "ChIPseq_RPE_SA1_FBS+": ["GSM5373161_RPE_SA1_FBS+.bed.gz"], "ChIPseq_RPE_CTCF": ["GSM5373162_RPE_CTCF.bed.gz"], "ChIPseq_RPE_Pol2_FBS-": ["GSM5373163_RPE_Pol2_FBS-.bed.gz"], "ChIPseq_RPE_Pol2_FBS+": ["GSM5373164_RPE_Pol2_FBS+.bed.gz"], "ChIPseq_RPE_Pol2ser2_FBS-": ["GSM5373165_RPE_Pol2ser2_FBS-.bed.gz"], "ChIPseq_RPE_Pol2ser2_FBS+": ["GSM5373166_RPE_Pol2ser2_FBS+.bed.gz"], "ChIPseq_RPE_Mau2_FBS-": ["GSM5373167_RPE_Mau2_FBS-.bed.gz"], "ChIPseq_RPE_Mau2_FBS+": ["GSM5373168_RPE_Mau2_FBS+.bed.gz"], "ChIPseq_RPE_Med1_FBS-": ["GSM5373169_RPE_Med1_FBS-.bed.gz"], "ChIPseq_RPE_Med1_FBS+": ["GSM5373170_RPE_Med1_FBS+.bed.gz"], "ChIPseq_RPE_K27ac": ["GSM5373171_RPE_K27ac.bed.gz"], "ChIPseq_Fibroblast_AFF4_CdLS": ["GSM5373177_Fibroblast_AFF4_CdLS.bed.gz"], "ChIPseq_Fibroblast_AFF4_CHOPS": ["GSM5373178_Fibroblast_AFF4_CHOPS.bed.gz"], "ChIPseq_Fibroblast_AFF4_Normal": ["GSM5373179_Fibroblast_AFF4_Normal.bed.gz"], "ChIPseq_Fibroblast_H3K27ac_CdLS": ["GSM5373180_Fibroblast_H3K27ac_CdLS.bed.gz"], "ChIPseq_Fibroblast_H3K27ac_CHOPS": ["GSM5373181_Fibroblast_H3K27ac_CHOPS.bed.gz"], "ChIPseq_Fibroblast_H3K27ac_Normal": ["GSM5373182_Fibroblast_H3K27ac_Normal.bed.gz"], "ChIPseq_Fibroblast_NIPBL_CdLS": ["GSM5373183_Fibroblast_NIPBL_CdLS.bed.gz"], "ChIPseq_Fibroblast_NIPBL_CHOPS": ["GSM5373184_Fibroblast_NIPBL_CHOPS.bed.gz"], "ChIPseq_Fibroblast_NIPBL_Normal": ["GSM5373185_Fibroblast_NIPBL_Normal.bed.gz"], "ChIPseq_Fibroblast_Pol2_CdLS": ["GSM5373186_Fibroblast_Pol2_CdLS.bed.gz"], "ChIPseq_Fibroblast_Pol2_CHOPS": ["GSM5373187_Fibroblast_Pol2_CHOPS.bed.gz"], "ChIPseq_Fibroblast_Pol2_Normal": ["GSM5373188_Fibroblast_Pol2_Normal.bed.gz"], "ChIPseq_Fibroblast_Pol2ser5_CdLS": ["GSM5373189_Fibroblast_Pol2ser5_CdLS.bed.gz"], "ChIPseq_Fibroblast_Pol2ser5_CHOPS": ["GSM5373190_Fibroblast_Pol2ser5_CHOPS.bed.gz"], "ChIPseq_Fibroblast_Pol2ser5_Normal": ["GSM5373191_Fibroblast_Pol2ser5_Normal.bed.gz"], "ChIPseq_Fibroblast_Rad21_CdLS": ["GSM5373192_Fibroblast_Rad21_CdLS.bed.gz"], "ChIPseq_Fibroblast_Rad21_CHOPS": ["GSM5373193_Fibroblast_Rad21_CHOPS.bed.gz"], "ChIPseq_Fibroblast_Rad21_Normal": ["GSM5373194_Fibroblast_Rad21_Normal.bed.gz"], "New_MCF7_Pol2_NIPBLKD_Ctrl": ["GSM5880288_New_MCF7_Pol2_NIPBLKD_Ctrl.peak.bed.gz"], "New_MCF7_Pol2_NIPBLKD_E2": ["GSM5880289_New_MCF7_Pol2_NIPBLKD_E2.peak.bed.gz"], "New_MCF7_Pol2_Rad21KD_Ctrl": ["GSM5880290_New_MCF7_Pol2_Rad21KD_Ctrl.peak.bed.gz"], "New_MCF7_Pol2_Rad21KD_E2": ["GSM5880291_New_MCF7_Pol2_Rad21KD_E2.peak.bed.gz"], "New_MCF7_Pol2_WT_Ctrl": ["GSM5880292_New_MCF7_Pol2_WT_Ctrl.peak.bed.gz"], "New_MCF7_Pol2_WT_E2": ["GSM5880293_New_MCF7_Pol2_WT_E2.peak.bed.gz"], "New_MCF7_Pol2ser2_NIPBLKD_Ctrl": ["GSM5880294_New_MCF7_Pol2ser2_NIPBLKD_Ctrl.peak.bed.gz"], "New_MCF7_Pol2ser2_NIPBLKD_E2": ["GSM5880295_New_MCF7_Pol2ser2_NIPBLKD_E2.peak.bed.gz"], "New_MCF7_Pol2ser2_Rad21KD_Ctrl": ["GSM5880296_New_MCF7_Pol2ser2_Rad21KD_Ctrl.peak.bed.gz"], "New_MCF7_Pol2ser2_Rad21KD_E2": ["GSM5880297_New_MCF7_Pol2ser2_Rad21KD_E2.peak.bed.gz"], "New_MCF7_Pol2ser2_WT_Ctrl": ["GSM5880298_New_MCF7_Pol2ser2_WT_Ctrl.peak.bed.gz"], "New_MCF7_Pol2ser2_WT_E2": ["GSM5880299_New_MCF7_Pol2ser2_WT_E2.peak.bed.gz"], "New_RPE_Rad21_FBS+": ["GSM5880300_New_RPE_Rad21_FBS+.peak.bed.gz"], "New_RPE_Rad21_FBS-": ["GSM5880301_New_RPE_Rad21_FBS-.peak.bed.gz"], "H7_P300": ["GSM5597566_H7_P300_summits.bed.gz"], "H7_SP1": ["GSM5597567_H7_SP1_summits.bed.gz"], "H7_NCOA3": ["GSM5597568_H7_NCOA3_summits.bed.gz"], "CORL311_OCAT-P_F-1": ["GSM5657726_CORL311_OCAT-P_F-1_S5_R1_001.fastq.gz_peaks.narrowPeak.gz"], "CORL311_OCAT-P_F-2": ["GSM5657727_CORL311_OCAT-P_F-2_S6_R1_001.fastq.gz_peaks.narrowPeak.gz"], "CORL311_POU2F3-P_F-1": ["GSM5657728_CORL311_POU2F3-P_F-1_S3_R1_001.fastq.gz_peaks.narrowPeak.gz"], "CORL311_POU2F3-Rb2": ["GSM5657729_CORL311_POU2F3-Rb2_S7_R1_001.fastq.gz_peaks.narrowPeak.gz"], "NCIH1048_12CA5": ["GSM5657730_NCIH1048_12CA5_S2_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz"], "NCIH1048_CST": ["GSM5657731_NCIH1048_CST_S3_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz"], "NCIH211_Cherry_FL_HA": ["GSM5657737_NCIH211_Cherry_FL_HA_S3_R1_001.fastq_merged.gz_peaks.narrowPeak.gz"], "NCIH211_OCA-T_Ab1": ["GSM5657742_NCIH211_OCA-T_Ab1_S8_R1_001.fastq.gz_peaks.narrowPeak.gz"], "NCIH211_OCA-T_Ab2": ["GSM5657743_NCIH211_OCA-T_Ab2_S7_R1_001.fastq.gz_peaks.narrowPeak.gz"], "NCIH211_POU2F3_Ab1": ["GSM5657745_NCIH211_POU2F3_Ab1_S9_R1_001.fastq.gz_peaks.narrowPeak.gz"], "NCIH211_POU2F3_ChIP": ["GSM5657746_NCIH211_POU2F3_ChIP_S1_R1_001.fastq.gz_peaks.narrowPeak.gz"], "NCIH211_POU2F3_Input": ["GSM5657747_NCIH211_POU2F3_Rb_2_S2_R1_001.fastq.gz_peaks.narrowPeak.gz"], "NCIH526_OCA-T_Ab1": ["GSM5657751_NCIH526_OCA-T_Ab1_S6_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz"], "NCIH526_OCA-T_Ab2": ["GSM5657752_NCIH526_OCA-T_Ab2_S5_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz"], "NCIH526_POU2F3_PF_Ab1": ["GSM5657753_NCIH526_POU2F3_PF_Ab1_S3_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz"], "NCIH526_POU2F3_Rb_2": ["GSM5657754_NCIH526_POU2F3_Rb_2_S2_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz"], "Huh7 cell lines-ATAC-DMSO-rep1": ["GSM5765170_DMSO-ATAC-1_peaks.sort.narrowPeak.gz"], "Huh7 cell lines-ATAC-DMSO-rep2": ["GSM5765171_DMSO-ATAC-2_peaks.sort.narrowPeak.gz"], "Huh7 cell lines-ATAC-Sorafenib-rep3": ["GSM5765172_Sora-ATAC-1_peaks.sort.narrowPeak.gz"], "Huh7 cell lines-ATAC-Sorafenib-rep4": ["GSM5765173_Sora-ATAC-2_peaks.sort.narrowPeak.gz"], "ChIRP-Seq data for Lnc-CCTT in hela cells replicate1": ["GSM4504493_hela-AMT-unique-peaks.bed.gz", "GSM4504493_hela-AMT-peaks.bed.gz"], "Replicate 3; BRD4884 treated; Day 5 differentiated hiPSCs": ["GSM6043947_B1_2_S6.narrowPeak.txt.gz"], "Replicate 2; BRD4884 treated Day 5 differentiated hiPSCs": ["GSM6043948_B2_2_S5.narrowPeak.txt.gz"], "Replicate 1; BRD4884 treated Day 5 differentiated hiPSCs": ["GSM6043949_B3_2_S4.narrowPeak.txt.gz"], "Replicate 3; Control Day 5 differentiated hiPSCs": ["GSM6043950_C1_1_S9.narrowPeak.txt.gz"], "Replicate 2; Control Day 5 differentiated hiPSCs": ["GSM6043951_C2_2_S8.narrowPeak.txt.gz"], "Replicate 1; Control Day 5 differentiated hiPSCs": ["GSM6043952_C3_2_S7.narrowPeak.txt.gz"], "Replicate 3; MS275 treated Day 5 differentiated hiPSCs": ["GSM6043953_M1_1_S3.narrowPeak.txt.gz"], "Replicate 2; MS275 treated Day 5 differentiated hiPSCs": ["GSM6043954_M2_2_S2.narrowPeak.txt.gz"], "Replicate 1; MS275 treated Day 5 differentiated hiPSCs": ["GSM6043955_M3_2_S1.narrowPeak.txt.gz"], "hTSC, ChIP, H3K27ac": ["GSM6043300_hTSC_ChIP_H3K27ac_peaks.bed.gz"], "hTSC, ChIP, H3K4me1": ["GSM6043301_hTSC_ChIP_H3K4me1_peaks.bed.gz"], "hTSC, ChIP, H3K4me3": ["GSM6043302_hTSC_ChIP_H3K4me3_peaks.bed.gz"], "hTSC, CUT&RUN, GATA3": ["GSM6043304_hTSC_CutRun_GATA3_peaks.bed.gz"], "hTSC, CUT&RUN, H3K27me3": ["GSM6043305_hTSC_CutRun_H3K27me3_peaks.bed.gz"], "hTSC, CUT&RUN, H3K9me3": ["GSM6043306_hTSC_CutRun_H3K9me3_peaks.bed.gz"], "hTSC, CUT&RUN, TEAD4": ["GSM6043308_hTSC_CutRun_TEAD4_peaks.bed.gz"], "hTSC, CUT&RUN, TFAP2C": ["GSM6043309_hTSC_CutRun_TFAP2C_peaks.bed.gz"], "U87 REST ChIPseq IDH1wt rep1": ["GSM5291620_RAG_F11_0003_P12_V11.narrowPeak.gz"], "U87 REST ChIPseq IDH1mut rep1": ["GSM5291621_RAG_F31_0004_P12_V11.narrowPeak.gz"], "U87 REST ChIPseq IDH1wt rep2": ["GSM5291624_RAG_F11_0007_P12_V11.narrowPeak.gz"], "U87 REST ChIPseq IDH1mut rep2": ["GSM5291625_RAG_F31_0008_P12_V11.narrowPeak.gz"], "BATF R1": ["GSM5328649_BATF_R1_peaks.narrowPeak.gz"], "BATF R3": ["GSM5328651_BATF_R3_peaks.narrowPeak.gz"], "FOSL1_C-12_R1": ["GSM5328653_FOSL1_C-12_R1_peaks.narrowPeak.gz"], "FOSL1_C-12_R2": ["GSM5328655_FOSL1_C-12_R2_peaks.narrowPeak.gz"], "FOSL2_R1": ["GSM5328657_FOSL2_R1_peaks.narrowPeak.gz"], "FOSL2_R2": ["GSM5328659_FOSL2_R2_peaks.narrowPeak.gz"], "p53 ChIP-seq from treated IC20 patient-derived organoid replicate 1": ["GSM4998578_5201_peaks_peaks.narrowPeak.gz"], "p53 ChIP-seq from treated IC20 patient-derived organoid replicate 2": ["GSM4998579_5202_peaks_peaks.narrowPeak.gz"], "tumor pericytes, TCF21-overexpressing, TCF21 IP": ["GSM6008267_TCF21_peaks.narrowPeak.gz"], "HEK293T, Cut&Tag, IgG, rep1": ["GSM6008188_IgG_rep1.frag_bin.bed.gz"], "HEK293T, Cut&Tag, IgG, rep2": ["GSM6008189_IgG_rep2.frag_bin.bed.gz"], "HEK293T, Cut&Tag, OGT, rep1": ["GSM6008190_OGT_rep1.frag_bin.bed.gz"], "HEK293T, Cut&Tag, OGT, rep2": ["GSM6008191_OGT_rep2.frag_bin.bed.gz"], "HEK293T, Cut&Tag, Dot1L, rep1": ["GSM6008192_Dot1L_rep1.frag_bin.bed.gz"], "HEK293T, Cut&Tag, Dot1L, rep2": ["GSM6008193_Dot1L_rep2.frag_bin.bed.gz"], "HEK293T, Cut&Tag, siNC, OGT, rep1": ["GSM6008194_siNC-OGT_rep1.frag_bin.bed.gz"], "HEK293T, Cut&Tag, siNC, OGT, rep2": ["GSM6008195_siNC-OGT_rep2.frag_bin.bed.gz"], "HEK293T, Cut&Tag, siDot1L, OGT, rep1": ["GSM6008196_siDot1L-OGT_rep1.frag_bin.bed.gz"], "HEK293T, Cut&Tag, siDot1L, OGT, rep2": ["GSM6008197_siDot1L-OGT_rep2.frag_bin.bed.gz"], "PC9_DMSO-1 [ATAC-seq]": ["GSM5777944_X5a_3519AZ_PC9_DMSO-NF_peaks.narrowPeak.gz"], "PC9_DMSO-2 [ATAC-seq]": ["GSM5777945_X5b_3519AZ_PC9_DMSO-NF_peaks.narrowPeak.gz"], "PC9_DMSO-3 [ATAC-seq]": ["GSM5777946_X5c_3519AZ_PC9_DMSO-NF_peaks.narrowPeak.gz"], "PC9_osi_DTP-1 [ATAC-seq]": ["GSM5777947_X6a_3519AZ_PC9_9291-NF_peaks.narrowPeak.gz"], "PC9_osi_DTP-2 [ATAC-seq]": ["GSM5777948_X6b_3519AZ_PC9_9291-NF_peaks.narrowPeak.gz"], "PC9_osi_DTP-3 [ATAC-seq]": ["GSM5777949_X6c_3519AZ_PC9_9291-NF_peaks.narrowPeak.gz"], "PC9_AZD5153_1 [ATAC-seq]": ["GSM5777950_X7a_3519AZ_PC9_5153-NF_peaks.narrowPeak.gz"], "PC9_AZD5153_2 [ATAC-seq]": ["GSM5777951_X7b_3519AZ_PC9_5153-NF_peaks.narrowPeak.gz"], "PC9_AZD5153_3 [ATAC-seq]": ["GSM5777952_X7c_3519AZ_PC9_5153-NF_peaks.narrowPeak.gz"], "PC9_osi_DTP_AZD5153_combo-1 [ATAC-seq]": ["GSM5777953_X8a_3519AZ_PC9_Combo-NF_peaks.narrowPeak.gz"], "PC9_osi_DTP_AZD5153_combo-2 [ATAC-seq]": ["GSM5777954_X8b_3519AZ_PC9_Combo-NF_peaks.narrowPeak.gz"], "PC9_osi_DTP_AZD5153_combo-3 [ATAC-seq]": ["GSM5777955_X8c_3519AZ_PC9_Combo-NF_peaks.narrowPeak.gz"], "HCC827_DMSO-1 [ATAC-seq]": ["GSM5777956_X1a_3562AZ_HCC827_CTRL-NF_peaks.narrowPeak.gz"], "HCC827_DMSO-2 [ATAC-seq]": ["GSM5777957_X1b_3562AZ_HCC827_CTRL-NF_peaks.narrowPeak.gz"], "HCC827_DMSO-3 [ATAC-seq]": ["GSM5777958_X1c_3562AZ_HCC827_CTRL-NF_peaks.narrowPeak.gz"], "HCC827_DTP-1 [ATAC-seq]": ["GSM5777959_X2a_3562AZ_HCC827_DTP-NF_peaks.narrowPeak.gz"], "HCC827_DTP-2 [ATAC-seq]": ["GSM5777960_X2b_3562AZ_HCC827_DTP-NF_peaks.narrowPeak.gz"], "HCC827_DTP-3 [ATAC-seq]": ["GSM5777961_X2c_3562AZ_HCC827_DTP-NF_peaks.narrowPeak.gz"], "HCC827_osi_DTP_AZD5153_combo_1 [ATAC-seq]": ["GSM5777962_X3a_3562AZ_HCC827_DTP-5153-NF_peaks.narrowPeak.gz"], "HCC827_osi_DTP_AZD5153_combo_2 [ATAC-seq]": ["GSM5777963_X3b_3562AZ_HCC827_DTP-5153-NF_peaks.narrowPeak.gz"], "HCC827_osi_DTP_AZD5153_combo_3 [ATAC-seq]": ["GSM5777964_X3c_3562AZ_HCC827_DTP-5153-NF_peaks.narrowPeak.gz"], "HCC2935_DMSO-1 [ATAC-seq]": ["GSM5777965_X4a_3562AZ_HCC2935_CTRL-NF_peaks.narrowPeak.gz"], "HCC2935_DMSO-2 [ATAC-seq]": ["GSM5777966_X4b_3562AZ_HCC2935_CTRL-NF_peaks.narrowPeak.gz"], "HCC2935_DMSO-3 [ATAC-seq]": ["GSM5777967_X4c_3562AZ_HCC2935_CTRL-NF_peaks.narrowPeak.gz"], "HCC2935_DTP-1 [ATAC-seq]": ["GSM5777968_X5a_3562AZ_HCC2935_DTP-NF_peaks.narrowPeak.gz"], "HCC2935_DTP-2 [ATAC-seq]": ["GSM5777969_X5b_3562AZ_HCC2935_DTP-NF_peaks.narrowPeak.gz"], "HCC2935_DTP-3 [ATAC-seq]": ["GSM5777970_X5c_3562AZ_HCC2935_DTP-NF_peaks.narrowPeak.gz"], "HCC2935_osi_DTP_AZD5153_combo-1 [ATAC-seq]": ["GSM5777971_X6a_3562AZ_HCC2935_DTP-5153-NF_peaks.narrowPeak.gz"], "HCC2935_osi_DTP_AZD5153_combo-2 [ATAC-seq]": ["GSM5777972_X6b_3562AZ_HCC2935_DTP-5153-NF_peaks.narrowPeak.gz"], "HCC2935_osi_DTP_AZD5153_combo-3 [ATAC-seq]": ["GSM5777973_X6c_3562AZ_HCC2935_DTP-5153-NF_peaks.narrowPeak.gz"], "H1975_DMSO-1 [ATAC-seq]": ["GSM5777974_X1a_3519AZ_H1975_DMSO-NF_peaks.narrowPeak.gz"], "H1975_DMSO-2 [ATAC-seq]": ["GSM5777975_X1b_3519AZ_H1975_DMSO-NF_peaks.narrowPeak.gz"], "H1975_DMSO-3 [ATAC-seq]": ["GSM5777976_X1c_3519AZ_H1975_DMSO-NF_peaks.narrowPeak.gz"], "H1975_Osi_DTP-1 [ATAC-seq]": ["GSM5777977_X2a_3519AZ_H1975_9291-NF_peaks.narrowPeak.gz"], "H1975_Osi_DTP-2 [ATAC-seq]": ["GSM5777978_X2b_3519AZ_H1975_9291-NF_peaks.narrowPeak.gz"], "H1975_Osi_DTP-3 [ATAC-seq]": ["GSM5777979_X2c_3519AZ_H1975_9291-NF_peaks.narrowPeak.gz"], "H1975_AZD5153_1 [ATAC-seq]": ["GSM5777980_X3a_3519AZ_H1975_5153-NF_peaks.narrowPeak.gz"], "H1975_AZD5153_2 [ATAC-seq]": ["GSM5777981_X3b_3519AZ_H1975_5153-NF_peaks.narrowPeak.gz"], "H1975_AZD5153_3 [ATAC-seq]": ["GSM5777982_X3c_3519AZ_H1975_5153-NF_peaks.narrowPeak.gz"], "H1975_osi_DTP_AZD5153_combo-1 [ATAC-seq]": ["GSM5777983_X4a_3519AZ_H1975_Combo-NF_peaks.narrowPeak.gz"], "H1975_osi_DTP_AZD5153_combo-2 [ATAC-seq]": ["GSM5777984_X4b_3519AZ_H1975_Combo-NF_peaks.narrowPeak.gz"], "H1975_osi_DTP_AZD5153_combo-3 [ATAC-seq]": ["GSM5777985_X4c_3519AZ_H1975_Combo-NF_peaks.narrowPeak.gz"], "H3K27Ac_H1975_DMSO_1": ["GSM5777987_X10_07BP_00YDAZ_H1975-DMSO-1_H3K27Ac_hs_i49_peaks.narrowPeak.gz"], "H3K27Ac_H1975_DMSO_2": ["GSM5777988_X11_07BQ_00YDAZ_H1975-DMSO-2_H3K27Ac_hs_i50_peaks.narrowPeak.gz"], "H3K27Ac_H1975_DMSO_3": ["GSM5777989_X12_07BR_00YDAZ_H1975-DMSO-3_H3K27Ac_hs_i52_peaks.narrowPeak.gz"], "H3K27Ac_H1975_osi_DTP_1": ["GSM5777990_X13_07BS_00YDAZ_H1975-Osim-1_H3K27Ac_hs_i53_peaks.narrowPeak.gz"], "H3K27Ac_H1975_osi_DTP_2": ["GSM5777991_X14_07BT_00YDAZ_H1975-Osim-2_H3K27Ac_hs_i54_peaks.narrowPeak.gz"], "H3K27Ac_H1975_osi_DTP_3": ["GSM5777992_X15_07C0_00YDAZ_H1875-Osim-3_H3K27Ac_hs_i60_peaks.narrowPeak.gz"], "H3K27Ac_H1975_osi_DTP_AZD5153_combo_1": ["GSM5777993_X16_07BU_00YDAZ_H1975-Osim-AZD-1_H3K27Ac_hs_i55_peaks.narrowPeak.gz"], "H3K27Ac_H1975_osi_DTP_AZD5153_combo_2": ["GSM5777994_X17_07BV_00YDAZ_H1975-Osim-AZD-2_H3K27Ac_hs_i56_peaks.narrowPeak.gz"], "H3K27Ac_H1975_osi_DTP_AZD5153_combo_3": ["GSM5777995_X18_07BW_00YDAZ_H1975-Osim-AZD-3_H3K27Ac_hs_i57_peaks.narrowPeak.gz"], "ATAC-seq_Primary_hepatocytes": ["GSM5611543_Primary_hepatocytes_ATAC_seq_MACS2.bed.gz"], "ATAC-seq_2D hepatocyte differentiation": ["GSM5611544_2D_PSC_hepatocytes_ATAC_seq_MACS2.bed.gz"], "ATAC-seq_3D hepatocyte differentiation": ["GSM5611545_3D_PSC_hepatocytes_ATAC_seq_MACS2.bed.gz"], "20200304_AQL_H3K27AC_KL7876_S31": ["GSM5611547_20200304_AQL_H3K27AC_KL7876_S31_keepdup1_peaks.narrowPeak.bed.gz"], "20200304_Donor2_H3K27AC_KL7876_S32": ["GSM5611548_20200304_Donor2_H3K27AC_KL7876_S32_keepdup1_peaks.narrowPeak.bed.gz"], "20200304_HM_2D_20180906_H3K27AC_KL7876_S25": ["GSM5611549_20200304_HM_2D_20180906_H3K27AC_KL7876_S25_keepdup1_peaks.narrowPeak.bed.gz"], "20200304_HM_2D_2020_H3K27AC_KL7876_S26": ["GSM5611550_20200304_HM_2D_2020_H3K27AC_KL7876_S26_keepdup1_peaks.narrowPeak.bed.gz"], "20191030_Hepatocytes_3D-H3K27AC_KL7532_S5": ["GSM5611551_20191030_Hepatocytes_3D-H3K27AC_KL7532_S5_keepdup1_peaks.narrowPeak.bed.gz"], "20200304_HM_3D_2020_H3K27AC_KL7876_S27": ["GSM5611552_20200304_HM_3D_2020_H3K27AC_KL7876_S27_keepdup1_peaks.narrowPeak.bed.gz"], "H1_H3K27Ac": ["GSM5611553_H1_H3K27Ac_keepdup1_peaks.narrowPeak.bed.gz"], "ChIP-seq_mH2A1.1": ["GSM4151570_ChIP_seq_mH2A1.1_peaks.bed.gz"], "ChIP-seq_mH2A1": ["GSM4151571_ChIP_seq_mH2A1_peaks.bed.gz"], "16D-CRPC-0d-ENZ-ATAC": ["GSM5553084_16D-CRPC-0d-ENZ-AccDNA-peak.narrowPeak.gz"], "16D-CRPC-3d-ENZ-ATAC": ["GSM5553085_16D-CRPC-3d-ENZ-AccDNA-peak.narrowPeak.gz"], "16D-CRPC-10d-ENZ-ATAC": ["GSM5553086_16D-CRPC-10d-ENZ-AccDNA-peak.narrowPeak.gz"], "42D-ENZR-ATAC": ["GSM5553087_42D-ENZR-AccDNA-peak.narrowPeak.gz"], "NCI-H660-ATAC": ["GSM5553088_NCI-H660-AccDNA-peak.narrowPeak.gz"], "42D-ENZR-shASCL1-ATAC": ["GSM5553089_42D-ENZR-shASCL1-AccDNA-peak.narrowPeak.gz"], "42D-ENZR-ASCL1-ChIP": ["GSM5553101_42D-ENZR-ASCL1-ChIP-peak.narrowPeak.gz"], "NCI-H660-ASCL1-ChIP": ["GSM5553103_NCI-H660-ASCL1-ChIP-peak.narrowPeak.gz"], "42D-ENZR-shASCL1-H3K27me3-ChIP": ["GSM5553105_42D-ENZR-shASCL1-H3K27me3-ChIP-broad_peaks.broadPeak.gz"], "42D-ENZR-shASCL1-EZH2-ChIP": ["GSM5553106_42D-ENZR-shASCL1-EZH2-ChIP-broad_peaks.broadPeak.gz"], "16D-CRPC-H3K27me3-ChIP": ["GSM5553108_16D-CRPC-H3K27me3-ChIP-broad_peaks.broadPeak.gz"], "16D-CRPC-0d-ENZ-Rep2-ATAC": ["GSM5862244_16D-CRPC-0d-ENZ-AccDNA-Rep2-peak.narrowPeak.gz"], "16D-CRPC-3d-ENZ-Rep2-ATAC": ["GSM5862245_16D-CRPC-3d-ENZ-AccDNA-Rep2-peak.narrowPeak.gz"], "16D-CRPC-10d-ENZ-Rep2-ATAC": ["GSM5862246_16D-CRPC-10d-ENZ-AccDNA-Rep2-peak.narrowPeak.gz"], "16D-CRPC-0d-ENZ-Rep3-ATAC": ["GSM5862247_16D-CRPC-0d-ENZ-AccDNA-Rep3-peak.narrowPeak.gz"], "16D-CRPC-3d-ENZ-Rep3-ATAC": ["GSM5862248_16D-CRPC-3d-ENZ-AccDNA-Rep3-peak.narrowPeak.gz"], "16D-CRPC-10d-ENZ-Rep3-ATAC": ["GSM5862249_16D-CRPC-10d-ENZ-AccDNA-Rep3-peak.narrowPeak.gz"], "MRC5-TERC-CHIRP": ["GSM5566215_peaks.bed.gz"], "SK-N-BE2 GNE987 10nm_H3K27ac": ["GSM5835586_GNE987-10nM-H3K27ac_peaks.narrowPeak.gz"], "H3K27ac_T00_rep1": ["GSM5605583_H3K27ac_T00_1-2_peaks.narrowPeak.gz"], "H3K27ac_T04_rep1": ["GSM5605584_H3K27ac_T04_1-2_peaks.narrowPeak.gz"], "H3K27ac_T08_rep1": ["GSM5605585_H3K27ac_T08_1-2_peaks.narrowPeak.gz"], "H3K27ac_T12_rep1": ["GSM5605586_H3K27ac_T12_1-2_peaks.narrowPeak.gz"], "H3K27ac_T16_rep1": ["GSM5605587_H3K27ac_T16_1-2_peaks.narrowPeak.gz"], "H3K27ac_T20_rep1": ["GSM5605588_H3K27ac_T20_1-2_peaks.narrowPeak.gz"], "H3K27ac_T24_rep1": ["GSM5605589_H3K27ac_T24_1-2_peaks.narrowPeak.gz"], "H3K4me1_T00_rep1": ["GSM5605590_H3K4me1_T00_1_2_peaks.broadPeak.gz"], "H3K4me1_T04_rep1": ["GSM5605592_H3K4me1_T04_1_2_peaks.broadPeak.gz"], "H3K4me1_T08_rep1": ["GSM5605594_H3K4me1_T08_1_2_peaks.broadPeak.gz"], "H3K4me1_T12_rep1": ["GSM5605596_H3K4me1_T12_1_2_peaks.broadPeak.gz"], "H3K4me1_T16_rep1": ["GSM5605598_H3K4me1_T16_1_2_peaks.broadPeak.gz"], "H3K4me1_T20_rep1": ["GSM5605600_H3K4me1_T20_1_2_peaks.broadPeak.gz"], "H3K4me1_T24_rep1": ["GSM5605602_H3K4me1_T24_1_2_peaks.broadPeak.gz"], "Pro_LMNB1_Rep1 [re-analysis]": ["GSM5605618_Dm2_LMNB1_Rep1_peaks.bed.gz"], "Pro_LMNB1_Rep2 [re-analysis]": ["GSM5605619_Dm2_LMNB1_Rep2_peaks.bed.gz"], "D0_LMNB1_Rep2 [re-analysis]": ["GSM5605620_D0_LMNB1_Rep2_peaks.bed.gz"], "D0_LMNB1_Rep3 [re-analysis]": ["GSM5605621_D0_LMNB1_Rep3_peaks.bed.gz"], "D1_LMNB1_Rep2 [re-analysis]": ["GSM5605622_D1_LMNB1_Rep2_peaks.bed.gz"], "D1_LMNB1_Rep3 [re-analysis]": ["GSM5605623_D1_LMNB1_Rep3_peaks.bed.gz"], "D3_LMNB1_Rep2 [re-analysis]": ["GSM5605624_D3_LMNB1_Rep2_peaks.bed.gz"], "D3_LMNB1_Rep3 [re-analysis]": ["GSM5605625_D3_LMNB1_Rep3_peaks.bed.gz"], "H3K4me3_T00_rep1": ["GSM5605630_H3K4me3_T00_1-2_peaks.narrowPeak.sorted.bed.gz"], "H3K4me3_T04_rep1": ["GSM5605631_H3K4me3_T04_1-2_peaks.narrowPeak.sorted.bed.gz"], "H3K4me3_T08_rep1": ["GSM5605632_H3K4me3_T08_1-2_peaks.narrowPeak.sorted.bed.gz"], "H3K4me3_T12_rep1": ["GSM5605633_H3K4me3_T12_1-2_peaks.narrowPeak.sorted.bed.gz"], "H3K4me3_T16_rep1": ["GSM5605634_H3K4me3_T16_1-2_peaks.narrowPeak.sorted.bed.gz"], "H3K4me3_T20_rep1": ["GSM5605635_H3K4me3_T20_1-2_peaks.narrowPeak.sorted.bed.gz"], "H3K4me3_T24_rep1": ["GSM5605636_H3K4me3_T24_1-2_peaks.narrowPeak.sorted.bed.gz"], "H3K27ac_T72_rep1": ["GSM5862377_T72_H3K27ac_peaks.narrowPeak.gz"], "H3K4me3_T72_rep1": ["GSM5862378_T72_H3K4me3_peaks.narrowPeak.gz"], "H3K4me1_T72_rep1": ["GSM5862379_T72_H3K4me1_peaks.broadPeak.gz"], "H3K4me1_T72_rep2": ["GSM5862380_T72_H3K4me1_peaks.broadPeak.gz"], "Empty vector Control 1 (ATAC-seq)": ["GSM5354428_EFa_1_S18_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Empty vector Control 2 (ATAC-seq)": ["GSM5354429_EFa_2_S22_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Empty vector Control 3 (ATAC-seq)": ["GSM5354430_Efa_3_S28_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Nuclear HK2 overexpression 1 (ATAC-seq)": ["GSM5354431_PAA1_S17_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Nuclear HK2 overexpression 2 (ATAC-seq)": ["GSM5354432_PAA2_S21_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Nuclear HK2 overexpression 3 (ATAC-seq)": ["GSM5354433_PAA3_S27_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Knockdown control 1 (ATAC-seq)": ["GSM5354434_OM_GFP1_S20_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Knockdown control 2 (ATAC-seq)": ["GSM5354435_OM_GFP2_S24_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Knockdown control 3 (ATAC-seq)": ["GSM5354436_OM_GFP3_S26_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Nuclear HK2 knockdown 1 (ATAC-seq)": ["GSM5354437_OM_SH1_1_S19_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Nuclear HK2 knockdown 2 (ATAC-seq)": ["GSM5354438_OM_SH1_2_S23_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Nuclear HK2 knockdown 3 (ATAC-seq)": ["GSM5354439_OM_SH1_3_S25_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Empty Vector Control 1 (ChIP-seq)": ["GSM5354440_EV1_S1_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz"], "Empty Vector Control 2 (ChIP-seq)": ["GSM5354441_EV2_S2_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz"], "Empty Vector Control 3 (ChIP-seq)": ["GSM5354442_EV3_S3_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz"], "Nuclear HK2 NLS1 overexpression 1 (ChIP-seq)": ["GSM5354443_PAA1_S4_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz"], "Nuclear HK2 NLS1 overexpression  2 (ChIP-seq)": ["GSM5354444_PAA2_S5_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz"], "Nuclear HK2 NLS1 overexpression  3 (ChIP-seq)": ["GSM5354445_PAA3_S6_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz"], "Nuclear HK2 NLS2 overexpression  1 (ChIP-seq)": ["GSM5354446_NES1_S7_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz"], "Nuclear HK2 NLS2 overexpression 2 (ChIP-seq)": ["GSM5354447_NES2_S8_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz"], "Nuclear HK2 NLS2 overexpression 3 (ChIP-seq)": ["GSM5354448_NES3_S9_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz"], "SW480_PCAT2_KI": ["GSM5481079_sw480_pcat2_insert_only.bed.gz"], "PAX2_T0_ChIPseq": ["GSM4140478_ag_007_01_01_chipseq_peaks.narrowPeak.gz"], "PAX2_R60_ChIPseq": ["GSM4140479_ag_008_01_01_chipseq_peaks.narrowPeak.gz"], "PAX2_E60_ChIPseq": ["GSM4140480_ag_009_01_01_chipseq_peaks.narrowPeak.gz"], "PIB-HDFs-PU.1_rep1": ["GSM5704554_PIB-HDFs_PU-1_hg38.bed.gz"], "PIB-HDFs-IRF8_rep1": ["GSM5704555_PIB-HDFs_IRF8_hg38.bed.gz"], "PIB-HDFs-BATF3_rep1": ["GSM5704556_PIB-HDFs_BATF3_hg38.bed.gz"], "PU.1-HDFs-PU.1": ["GSM5704557_PU-1-HDFs_PU-1_hg38.bed.gz"], "IRF8-HDFs-IRF8": ["GSM5704558_IRF8-HDFs_IRF8_hg38.bed.gz"], "BATF3-HDFs-BATF3": ["GSM5704559_BATF3-HDFs_BATF3_hg38.bed.gz"], "PIB-HDFs-PU-1_rep2": ["GSM5725000_PIB-HDFs-PU-1_hg38_rep2.bed.gz"], "PIB-HDFs-IRF8_rep2": ["GSM5725001_PIB-HDFs-IRF8_hg38_rep2.bed.gz"], "PIB-HDFs-BATF3_rep2": ["GSM5725002_PIB-HDFs-BATF3_hg38_rep2.bed.gz"], "Endometriosis 375": ["GSM5934078_Endometrioid_375-Endo_H3K27ac_hg38.overlap.bfilt.narrowPeak.gz"], "Endometriosis 589": ["GSM5934079_Endometrioid_589-Endo_H3K27ac_hg38.overlap.bfilt.narrowPeak.gz"], "Stroma 375": ["GSM5934080_Endometrioid_375-Str_H3K27ac_hg38.overlap.bfilt.narrowPeak.gz"], "Stroma 589": ["GSM5934081_Endometrioid_589-St_H3K27ac_hg38.overlap.bfilt.narrowPeak.gz"], "Fallopian Tube 19123 - side B - cultured": ["GSM5934082_01_FT19123-B-after_ATAC_hg38_peaks_filtered.bed.gz"], "Fallopian Tube 19123 - side B": ["GSM5934083_02_FT19123-B-before_ATAC_hg38_peaks_filtered.bed.gz"], "Fallopian Tube 19123 - side A": ["GSM5934084_06_FT19123-A-before_ATAC_hg38_peaks_filtered.bed.gz"], "Fallopian Tube 19155": ["GSM5934085_05_L-FT19155-03_ATAC_hg38_peaks_filtered.bed.gz"], "Fallopian Tube 64090": ["GSM5934086_12_FT64090_ATAC_hg38_peaks_filtered.bed.gz"], "Clear Cell Ovarian Cancer 511": ["GSM5934087_09_OCT-511_ATAC_hg38_peaks_filtered.bed.gz"], "High-Grade Serous Carcinoma s1015": ["GSM5934088_04_s1015_ATAC_hg38_peaks_filtered.bed.gz"], "High-Grade Serous Carcinoma s1040": ["GSM5934089_09_s1040_ATAC_hg38_peaks_filtered.bed.gz"], "High-Grade Serous Carcinoma s1048": ["GSM5934090_05_s1048_ATAC_hg38_peaks_filtered.bed.gz"], "High-Grade Serous Carcinoma s1070": ["GSM5934091_07_s1070_ATAC_hg38_peaks_filtered.bed.gz"], "High-Grade Serous Carcinoma s1382": ["GSM5934092_08_s1382_ATAC_hg38_peaks_filtered.bed.gz"], "High-Grade Serous Carcinoma s2640": ["GSM5934093_03_s2640_ATAC_hg38_peaks_filtered.bed.gz"], "High-Grade Serous Carcinoma s2722": ["GSM5934094_06_s2722_ATAC_hg38_peaks_filtered.bed.gz"], "High-Grade Serous Carcinoma s2904": ["GSM5934095_02_s2904_ATAC_hg38_peaks_filtered.bed.gz"], "High-Grade Serous Carcinoma s3263": ["GSM5934096_01_s3263_ATAC_hg38_peaks_filtered.bed.gz"], "High-Grade Serous Carcinoma s949": ["GSM5934097_10_s949_ATAC_hg38_peaks_filtered.bed.gz"], "0h_Hpx_Control_rep1": ["GSM5645874_0h_Hpx_Control_rep1.bed.gz"], "0h_Hpx_Control_rep2": ["GSM5645875_0h_Hpx_Control_rep2.bed.gz"], "0h_Hpx_siHIF1\u03b2_rep1": ["GSM5645876_0h_Hpx_siHIF1B_rep1.bed.gz"], "0h_Hpx_siHIF1\u03b2_rep2": ["GSM5645877_0h_Hpx_siHIF1B_rep2.bed.gz"], "1h_Hpx_Control_rep1": ["GSM5645878_1h_Hpx_Control_rep1.bed.gz"], "1h_Hpx_Control_rep2": ["GSM5645879_1h_Hpx_Control_rep2.bed.gz"], "1h_Hpx_siHIF1\u03b2_rep1": ["GSM5645880_1h_Hpx_siHIF1B_rep1.bed.gz"], "1h_Hpx_siHIF1\u03b2_rep2": ["GSM5645881_1h_Hpx_siHIF1B_rep2.bed.gz"], "24h_Hpx_Control_rep1": ["GSM5645882_24h_Hpx_Control_rep1.bed.gz"], "24h_Hpx_Control_rep2": ["GSM5645883_24h_Hpx_Control_rep2.bed.gz"], "24h_Hpx_siHIF1\u03b2_rep1": ["GSM5645884_24h_Hpx_siHIF1B_rep1.bed.gz"], "24h_Hpx_siHIF1\u03b2_rep2": ["GSM5645885_24h_Hpx_siHIF1B_rep2.bed.gz"], "Reox_Control_rep1": ["GSM5645886_Reox_Control_rep1.bed.gz"], "Reox_Control_rep2": ["GSM5645887_Reox_Control_rep2.bed.gz"], "Control_rep1": ["GSM5638901_Control_rep1.bed.gz"], "Control_rep2": ["GSM5638902_Control_rep2.bed.gz"], "VH298_rep1": ["GSM5638903_VH298_rep1.bed.gz"], "VH298_rep2": ["GSM5638904_VH298_rep2.bed.gz"], "HepG2 - H3K79me3": ["GSM5569762_H3K79me3_peaks.broadPeak.gz"], "HepG2 - H3K79me2": ["GSM5569763_H3K79me2_peaks.broadPeak.gz"], "HepG2 - H3K79me3_C": ["GSM5569765_H3K79me3_C_peaks.broadPeak.gz"], "HepG2 - H3K79me3_OE": ["GSM5569766_H3K79me3_OE_peaks.broadPeak.gz"], "Huh7_siNC_H3K27ac": ["GSM5621756_ChIPseq_Huh7_siNC_H3K27ac_summits.bed.gz"], "Huh7_siDHX37_H3K27ac": ["GSM5621758_ChIPseq_Huh7_siDHX37_H3K27ac_summits.bed.gz"], "Huh7_DHX37": ["GSM5621760_CUTTag_Huh7_DHX37_summits.bed.gz"], "Huh7_PLRG1": ["GSM5621761_CUTTag_Huh7_PLRG1_summits.bed.gz"], "Huh7_H3K27ac": ["GSM5597553_Huh7_H3K27ac_summits.bed.gz"], "Huh7_H3K4me1": ["GSM5597554_Huh7_H3K4me1_summits.bed.gz"], "Huh7_H3K4me3": ["GSM5597555_Huh7_H3K4me3_summits.bed.gz"], "Huh7_ATAC": ["GSM5597557_Huh7_ATAC_summits.bed.gz"], "HepG2_H3K27ac": ["GSM5597548_HepG2_H3K27ac_summits.bed.gz"], "HepG2_H3K4me1": ["GSM5597549_HepG2_H3K4me1_summits.bed.gz"], "HepG2_H3K4me3": ["GSM5597550_HepG2_H3K4me3_summits.bed.gz"], "HepG2_ATAC": ["GSM5597552_HepG2_ATAC_summits.bed.gz"], "CHIP-seq_THP1 H3K27ac": ["GSM5908232_CHIP-seq_THP1_H3K27ac.bed.gz"], "CHIP-seq_THP1 SIRT1": ["GSM5908233_CHIP-seq_THP1_SIRT1.bed.gz"], "H9_hESCs_TFIIIC": ["GSM5839471_TFIIIC_H9_hESCs_peaks.bed.gz"], "Clone M1 replicate 1 (ATAC-seq)": ["GSM5258440_M1.idr0.01.bfilt.narrowPeak.gz"], "Clone M1 replicate 2 (ATAC-seq)": ["GSM5258441_M2.idr0.01.bfilt.narrowPeak.gz"], "Clone M2 replicate 1 (ATAC-seq)": ["GSM5258442_E.idr0.01.bfilt.narrowPeak.gz"], "Clone M2 replicate 2 (ATAC-seq)": ["GSM5258443_EM3.idr0.01.bfilt.narrowPeak.gz"], "Clone E replicate 1 (ATAC-seq)": ["GSM5258444_EM2.idr0.01.bfilt.narrowPeak.gz"], "Clone E replicate 2 (ATAC-seq)": ["GSM5258445_EM1.idr0.01.bfilt.narrowPeak.gz"], "Clone EM3 replicate 1 (ATAC-seq)": ["GSM5258446_Parental.idr0.01.bfilt.narrowPeak.gz"], "H3K9me3 day 7 rep 1": ["GSM5463919_WT_H3K9me3_1_peaks100k.broadPeak.gz"], "H3K9me3 day 7 rep 2": ["GSM5463920_WT_H3K9me3_2_peaks100k.broadPeak.gz"], "H3K9me3 day 7 AHDC1/Gibbin KO rep 1": ["GSM5463921_AHDC1KO_H3K9me3_1_peaks100k.broadPeak.gz"], "H3K9me3 day 7 AHDC1/Gibbin KO rep 2": ["GSM5463922_AHDC1KO_H3K9me3_2_peaks100k.broadPeak.gz"], "AHDC1/Gibbin day 7 rep 1": ["GSM5463923_cterm_60s_1_genomecov_2_peaks_filterBL_peaks100K.narrowPeak.gz"], "AHDC1/Gibbin day 7 rep 2": ["GSM5463924_cterm_75s_1_genomecov_2_peaks_filterBL_peaks100K.narrowPeak.gz"], "MVV vector in HEK293T cells": ["GSM5858470_WT_W_2bp_mar2020.bed.gz"], "MVV vector in LKO cells": ["GSM5858471_LKO_L_2bp_mar2020.bed.gz"], "MVV vector in LHKO cells": ["GSM5858472_LHKO_D_2bp_mar2020.bed.gz"], "ChIP_JUNB_NFLAG_FLAG": ["GSM4832132_ChIP_JUNB_352_peaks.bed.gz"], "ChIP_JUNB_CFLAG_FLAG": ["GSM4832134_ChIP_JUNB_353_peaks.bed.gz"], "ChIP-MCF7-H3K27ac": ["GSM5683959_H3K27ac_peaks.narrowPeak.gz"], "ChIP-MCF7-RNAPol2": ["GSM5683960_POL2_peaks.narrowPeak.gz"], "NK92_HSF1_IP": ["GSM5834091_NK92_HSF1_IP.summits.bed.gz", "GSM5834091_NK92_HSF1_IP.peaks.bed.gz"], "019 Coronary artery bulk ATAC": ["GSM5681649_UVA019_CA_ATAC_3_peaks_rmBlacklist.narrowPeak.gz"], "067 Coronary artery bulk ATAC": ["GSM5681650_UVA067_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "108 Coronary artery bulk ATAC": ["GSM5681651_UVA108_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "049 Coronary artery bulk ATAC": ["GSM5681652_UVA049_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "007 Coronary artery bulk ATAC": ["GSM5681653_UVA007_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "066 Coronary artery bulk ATAC": ["GSM5681654_UVA066_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "083 Coronary artery bulk ATAC": ["GSM5681655_UVA083_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "079 Coronary artery bulk ATAC": ["GSM5681656_UVA079_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "009 Coronary artery bulk ATAC": ["GSM5681657_UVA009_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "068 Coronary artery bulk ATAC": ["GSM5681658_UVA068_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "064 Coronary artery bulk ATAC": ["GSM5681659_UVA064_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "027 Coronary artery bulk ATAC": ["GSM5681660_UVA027_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "045 Coronary artery bulk ATAC": ["GSM5681661_UVA045_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "023 Coronary artery bulk ATAC": ["GSM5681662_UVA023_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "014 Coronary artery bulk ATAC": ["GSM5681663_UVA014_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz"], "020 Coronary artery bulk ATAC": ["GSM5681664_UVA020_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz"], "057 Coronary artery bulk ATAC": ["GSM5681665_UVA057_CA_ATAC_3_peaks_rmBlacklist.narrowPeak.gz"], "040 Coronary artery bulk ATAC": ["GSM5681666_UVA040_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "030 Coronary artery bulk ATAC": ["GSM5681667_UVA030_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "046 Coronary artery bulk ATAC": ["GSM5681668_UVA046_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "058 Coronary artery bulk ATAC": ["GSM5681669_UVA058_CA_ATAC_1_peaks_rmBlacklist.narrowPeak.gz"], "050 Coronary artery bulk ATAC": ["GSM5681670_UVA050_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "053 Coronary artery bulk ATAC": ["GSM5681671_UVA053_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "080 Coronary artery bulk ATAC": ["GSM5681672_UVA080_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "015 Coronary artery bulk ATAC": ["GSM5681673_UVA015_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz"], "036 Coronary artery bulk ATAC": ["GSM5681674_UVA036_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "069 Coronary artery bulk ATAC": ["GSM5681675_UVA069_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "094 Coronary artery bulk ATAC": ["GSM5681676_UVA094_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "112 Coronary artery bulk ATAC": ["GSM5681677_UVA112_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "061 Coronary artery bulk ATAC": ["GSM5681678_UVA061_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "005 Coronary artery bulk ATAC": ["GSM5681679_UVA005_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "054 Coronary artery bulk ATAC": ["GSM5681680_UVA054_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "039 Coronary artery bulk ATAC": ["GSM5681681_UVA039_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "008 Coronary artery bulk ATAC": ["GSM5681682_UVA008_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz"], "062 Coronary artery bulk ATAC": ["GSM5681683_UVA062_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "PRDM1_hPGCLC_r1": ["GSM4836893_PRDM1_hPGCLC_r1_peaks.narrowPeak.gz"], "PRDM1_hPGCLC_r2": ["GSM4836894_PRDM1_hPGCLC_r2_peaks.narrowPeak.gz"], "SOX17_hDE_r1": ["GSM4836895_SOX17_hDE_r1_peaks.narrowPeak.gz"], "SOX17_hDE_r2": ["GSM4836896_SOX17_hDE_r2_peaks.narrowPeak.gz"], "SOX17_hPGCLC_r1": ["GSM4836897_SOX17_hPGCLC_r1_peaks.narrowPeak.gz"], "SOX17_hPGCLC_r3": ["GSM4836898_SOX17_hPGCLC_r3_peaks.narrowPeak.gz"], "Prostate Cancer Cell line DU145_DOX-_rep1": ["GSM5465767_DU-145_Doxminus_r1_peaks.narrowPeak.gz"], "Prostate Cancer Cell line DU145_DOX-_rep2": ["GSM5465768_DU-145_Doxminus_r2_peaks.narrowPeak.gz"], "Prostate Cancer Cell line DU145_DOX-_rep3": ["GSM5465769_DU-145_Doxminus_r3_peaks.narrowPeak.gz"], "Prostate Cancer Cell line DU145_DOX+_rep1": ["GSM5465770_DU-145_Doxplus_r1_peaks.narrowPeak.gz"], "Prostate Cancer Cell line DU145_DOX+_rep2": ["GSM5465771_DU-145_Doxplus_r2_peaks.narrowPeak.gz"], "Prostate Cancer Cell line DU145_DOX+_rep3": ["GSM5465772_DU-145_Doxplus_r3_peaks.narrowPeak.gz"], "Triple Negative Breast Cancer Cell line BT-549_DOX-_rep1": ["GSM5465773_BT549_Doxminus_r1_peaks.narrowPeak.gz"], "Triple Negative Breast Cancer Cell line BT-549_DOX-_rep2": ["GSM5465774_BT549_Doxminus_r2_peaks.narrowPeak.gz"], "Triple Negative Breast Cancer Cell line BT-549_DOX-_rep3": ["GSM5465775_BT549_Doxminus_r3_peaks.narrowPeak.gz"], "Triple Negative Breast Cancer Cell line BT-549_DOX+_rep1": ["GSM5465776_BT549_Doxplus_r1_peaks.narrowPeak.gz"], "Triple Negative Breast Cancer Cell line BT-549_DOX+_rep2": ["GSM5465777_BT549_Doxplus_r2_peaks.narrowPeak.gz"], "Triple Negative Breast Cancer Cell line BT-549_DOX+_rep3": ["GSM5465778_BT549_Doxplus_r3_peaks.narrowPeak.gz"], "Hi-C for Patient 1": ["GSM5136368_JCIp1.TAD.10kb_20kb.2D.bed.gz"], "Hi-C for Patient 2": ["GSM5136369_JCIp2.TAD.10kb_20kb.2D.bed.gz"], "Hi-C for Patient 3": ["GSM5136370_JCIp3.TAD.10kb_20kb.2D.bed.gz"], "GM02639 - 37\u00b0C": ["GSM5203044_PrimaryFibroblasts_37C_fusion_A-B_coord.bed.gz"], "GM02639 - 40\u00b0C": ["GSM5203045_PrimaryFibroblasts_40C_fusion_A-B_coord.bed.gz"], "GM02639 - recovery": ["GSM5203046_PrimaryFibroblasts_recovery_fusion_A-B_coord.bed.gz"], "HEK293T CT - 37\u00b0C": ["GSM5203047_CT_37C_fusion_A-B_coord.bed.gz"], "HEK293T CT - 42\u00b0C": ["GSM5203048_CT_42C_fusion_A-B_coord.bed.gz"], "HEK293T CT - recovery": ["GSM5203049_CT_recovery_fusion_A-B_coord.bed.gz"], "HEK293T KD - 37\u00b0C": ["GSM5203050_KD_37C_fusion_A-B_coord.bed.gz"], "HEK293T KD - 42\u00b0C": ["GSM5203051_KD_42C_fusion_A-B_coord.bed.gz"], "HEK293T KD - recovery": ["GSM5203052_KD_recovery_fusion_A-B_coord.bed.gz"], "TP53BP1 CT": ["GSM5203053_TP53BP1_0.2kb_bin_cov_CT_exclusive.bed.gz"], "TP53BP1 KD": ["GSM5203054_TP53BP1_0.2kb_bin_cov_KD_exclusive.bed.gz"], "NALM6 cells - H3K4me2 rep1": ["GSM5769882_NALM6_1_H3K4me2_1_SEACR.stringent.bed.gz"], "NALM6 cells - H3K4me2 rep2": ["GSM5769883_NALM6_1_H3K4me2_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "NALM6 cells - H3K4me2 rep3": ["GSM5769884_NALM6_1_H3K4me2_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "NALM6 cells - H3K4me3 rep1": ["GSM5769885_NALM6_2_H3K4me3_1_SEACR.stringent.bed.gz"], "NALM6 cells - H3K4me3 rep2": ["GSM5769886_NALM6_2_H3K4me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "NALM6 cells - H3K4me3 rep3": ["GSM5769887_NALM6_2_H3K4me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "NALM6 cells - H3K27me3 rep1": ["GSM5769888_NALM6_3_H3K27me3_1_SEACR.stringent.bed.gz"], "NALM6 cells - H3K27me3 rep2": ["GSM5769889_NALM6_3_H3K27me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "NALM6 cells - H3K27me3 rep3": ["GSM5769890_NALM6_3_H3K27me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "NALM6 cells treated w/ bryostatin - H3K4me2 rep1": ["GSM5769894_NALM6B_1_H3K4me2_1_SEACR.stringent.bed.gz"], "NALM6 cells treated w/ bryostatin - H3K4me2 rep2": ["GSM5769895_NALM6B_1_H3K4me2_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "NALM6 cells treated w/ bryostatin- H3K4me2 rep3": ["GSM5769896_NALM6B_1_H3K4me2_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "NALM6 cells treated w/ bryostatin - H3K4me3 rep1": ["GSM5769897_NALM6B_2_H3K4me3_1_SEACR.stringent.bed.gz"], "NALM6 cells treated w/ bryostatin - H3K4me3 rep2": ["GSM5769898_NALM6B_2_H3K4me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "NALM6 cells treated w/ bryostatin - H3K4me3 rep3": ["GSM5769899_NALM6B_2_H3K4me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "NALM6 cells treated w/ bryostatin - H3K27me3 rep1": ["GSM5769900_NALM6B_3_H3K27me3_1_SEACR.stringent.bed.gz"], "NALM6 cells treated w/ bryostatin - H3K27me3 rep2": ["GSM5769901_NALM6B_3_H3K27me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "NALM6 cells treated w/ bryostatin - H3K27me3 rep3": ["GSM5769902_NALM6B_3_H3K27me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells - H3K4me2 rep1": ["GSM5769906_REH_1_H3K4me2_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells - H3K4me2 rep2": ["GSM5769907_REH_1_H3K4me2_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells - H3K4me2 rep3": ["GSM5769908_REH_1_H3K4me2_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells - H3K4me3 rep1": ["GSM5769909_REH_2_H3K4me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells - H3K4me3 rep2": ["GSM5769910_REH_2_H3K4me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells - H3K4me3 rep3": ["GSM5769911_REH_2_H3K4me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells - H3K27me3 rep1": ["GSM5769912_REH_3_H3K27me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells - H3K27me3 rep2": ["GSM5769913_REH_3_H3K27me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells - H3K27me3 rep3": ["GSM5769914_REH_3_H3K27me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells treated w/ bryostatin - H3K4me2 rep1": ["GSM5769918_REHB_1_H3K4me2_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells treated w/ bryostatin - H3K4me2 rep2": ["GSM5769919_REHB_1_H3K4me2_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells treated w/ bryostatin- H3K4me2 rep3": ["GSM5769920_REHB_1_H3K4me2_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells treated w/ bryostatin - H3K4me3 rep1": ["GSM5769921_REHB_2_H3K4me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells treated w/ bryostatin - H3K4me3 rep2": ["GSM5769922_REHB_2_H3K4me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells treated w/ bryostatin - H3K4me3 rep3": ["GSM5769923_REHB_2_H3K4me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells treated w/ bryostatin - H3K27me3 rep1": ["GSM5769924_REHB_3_H3K27me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells treated w/ bryostatin - H3K27me3 rep2": ["GSM5769925_REHB_3_H3K27me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "REH cells treated w/ bryostatin - H3K27me3 rep3": ["GSM5769926_REHB_3_H3K27me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells - H3K4me2 rep1": ["GSM5769930_Raji_1_H3K4me2_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells - H3K4me2 rep2": ["GSM5769931_Raji_1_H3K4me2_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells - H3K4me2 rep3": ["GSM5769932_Raji_1_H3K4me2_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells - H3K4me3 rep1": ["GSM5769933_Raji_2_H3K4me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells - H3K4me3 rep2": ["GSM5769934_Raji_2_H3K4me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells - H3K4me3 rep3": ["GSM5769935_Raji_2_H3K4me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells - H3K27me3 rep1": ["GSM5769936_Raji_3_H3K27me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells - H3K27me3 rep2": ["GSM5769937_Raji_3_H3K27me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells - H3K27me3 rep3": ["GSM5769938_Raji_3_H3K27me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells treated w/ bryostatin - H3K4me2 rep1": ["GSM5769942_RajiB_1_H3K4me2_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells treated w/ bryostatin - H3K4me2 rep2": ["GSM5769943_RajiB_1_H3K4me2_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells treated w/ bryostatin- H3K4me2 rep3": ["GSM5769944_RajiB_1_H3K4me2_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells treated w/ bryostatin - H3K4me3 rep1": ["GSM5769945_RajiB_2_H3K4me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells treated w/ bryostatin - H3K4me3 rep2": ["GSM5769946_RajiB_2_H3K4me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells treated w/ bryostatin - H3K4me3 rep3": ["GSM5769947_RajiB_2_H3K4me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells treated w/ bryostatin - H3K27me3 rep1": ["GSM5769948_RajiB_3_H3K27me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells treated w/ bryostatin - H3K27me3 rep2": ["GSM5769949_RajiB_3_H3K27me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Raji cells treated w/ bryostatin - H3K27me3 rep3": ["GSM5769950_RajiB_3_H3K27me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "OMM2.3-H3K79me2-rep1": ["GSM5487676_OMM2.3-H3K79me2-rep1_peaks.narrowPeak.gz"], "OMM2.3-H3K79me2-rep2": ["GSM5487677_OMM2.3-H3K79me2-rep2_peaks.narrowPeak.gz"], "RecF8-EGFP ChIP-Seq": ["GSM4830980_RecF8-EGFP.narrowPeak.gz"], "IRF3 binding region in BT549 cells transfected with polyI:C (control gRNA)": ["GSM5683276_208210211_sgNC_50.hg38.norm.q1e4_peaks.bed.gz"], "IRF3 binding region in BT549-caSmad3 cells transfected with polyI:C (Smad3 gene inactivation, gRNA#1)": ["GSM5683277_208210211_sgS31_50.hg38.norm.q1e4_peaks.bed.gz"], "IRF3 binding region in BT549-caSmad3 cells transfected with polyI:C (Smad3 gene inactivation, gRNA#2)": ["GSM5683278_208210211_sgS32_50.hg38.norm.q1e4_peaks.bed.gz"], "IRF3 binding region in BT549-HA cells transfected with polyI:C": ["GSM5398569_192193_2328_50.hg38.0319q5e2_peaks.woRandom.bed.gz"], "IRF3 binding region in BT549-caSmad3 cells transfected with polyI:C": ["GSM5398570_192193_2430_50.hg38.0319q5e2_peaks.woRandom.bed.gz"], "Smad3 binding region in BT549-HA cells": ["GSM5398571_192193_2126_50.hg38.0319q5e2_peaks.woRandom.bed.gz"], "Smad3 binding region in BT549-HA cells transfected with polyI:C": ["GSM5398572_192193_2227_50.hg38.0319q5e2_peaks.woRandom.bed.gz"], "Smad3 binding region in BT549-caSmad3 cells transfected with polyI:C": ["GSM5398573_192193_2531_50.hg38.0319q5e2_peaks.woRandom.bed.gz"], "Gar15-13 Vehicle 1 ER": ["GSM5218278_IVC018_Gar15-13_Veh_1_ER_ChIP_peaks.narrowPeak.gz"], "Gar15-13 Vehicle 2 ER": ["GSM5218279_IVC018_Gar15-13_Veh_2_ER_ChIP_peaks.narrowPeak.gz"], "Gar15-13 Vehicle 3 ER": ["GSM5218280_IVC018_Gar15-13_Veh_3_ER_ChIP_peaks.narrowPeak.gz"], "Gar15-13 Vehicle 4 ER": ["GSM5218281_IVC018_Gar15-13_Veh_4_ER_ChIP_peaks.narrowPeak.gz"], "Gar15-13 Decitabine 4 ER": ["GSM5218282_IVC018_Gar15-13_Decitabine_4_ER_ChIP_peaks.narrowPeak.gz"], "Gar15-13 Decitabine 5 ER": ["GSM5218283_IVC018_Gar15-13_Decitabine_5_ER_ChIP_peaks.narrowPeak.gz"], "Gar15-13 Decitabine 9 ER": ["GSM5218284_IVC018_Gar15-13_Decitabine_9_ER_ChIP_peaks.narrowPeak.gz"], "Gar15-13 Decitabine 10 ER": ["GSM5218285_IVC018_Gar15-13_Decitabine_10_ER_ChIP_peaks.narrowPeak.gz"], "HCI005 Vehicle 1 ER": ["GSM5218287_PDXHCI005_Veh_1_ER_ChIP_peaks.narrowPeak.gz"], "HCI005 Vehicle 2 ER": ["GSM5218288_PDXHCI005_Veh_2_ER_ChIP_peaks.narrowPeak.gz"], "HCI005 Vehicle 3 ER": ["GSM5218289_PDXHCI005_Veh_3_ER_ChIP_peaks.narrowPeak.gz"], "HCI005 Vehicle 4 ER": ["GSM5218290_PDXHCI005_Veh_4_ER_ChIP_peaks.narrowPeak.gz"], "HCI005 Vehicle Input ER": ["GSM5218291_PDXHCI005_Veh_pooled_input_peaks.narrowPeak.gz"], "HCI005 Decitabine 1 ER": ["GSM5218292_PDXHCI005_Dec_1_ER_ChIP_peaks.narrowPeak.gz"], "HCI005 Decitabine 2 ER": ["GSM5218293_PDXHCI005_Dec_2_ER_ChIP_peaks.narrowPeak.gz"], "HCI005 Decitabine 3 ER": ["GSM5218294_PDXHCI005_Dec_3_ER_ChIP_peaks.narrowPeak.gz"], "HIC005 Decitabine Input ER": ["GSM5218295_PDXHCI005_Dec_pooled_input_peaks.narrowPeak.gz"], "Gar15-13 Vehicle 1 FOXA1": ["GSM5218296_Gar15-13_FOXA1_Veh_1_peaks.narrowPeak.gz"], "Gar15-13 Vehicle 2 FOXA1": ["GSM5218297_Gar15-13_FOXA1_Veh_2_peaks.narrowPeak.gz"], "Gar15-13 Vehicle 3 FOXA1": ["GSM5218298_Gar15-13_FOXA1_Veh_3_peaks.narrowPeak.gz"], "Gar15-13 Vehicle 4 FOXA1": ["GSM5218299_Gar15-13_FOXA1_Veh_4_peaks.narrowPeak.gz"], "MDA-MB-231_LAP-Smad2_untreated": ["GSM5718542_SMAD3_untreated_peaks.narrowPeak.gz"], "MDA-MB-231_LAP-Smad3_untreated": ["GSM5718543_LAP-untreated_Smad2.narrowPeak.gz"], "MDA-MB-231_LAP-Smad2_treated": ["GSM5718544_LAP-treated_Smad2.narrowPeak.gz"], "MDA-MB-231_LAP-Smad3_treated": ["GSM5718545_SMAD3_treated_peaks.narrowPeak.gz"], "K562_100k_bg4_bulk_rep1_tec1": ["GSM5501186_A589_SLX-20231_K562_100k_bg4_bulk_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_100k_bg4_bulk_rep1_tec2": ["GSM5501187_A590_SLX-20231_K562_100k_bg4_bulk_rep1_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_100k_None_bulk_rep1_tecx": ["GSM5501188_A592_SLX-20231_K562_100k_None_bulk_rep1_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS_100k_bg4_bulk_rep1_tec1": ["GSM5501189_A595_SLX-20231_U2OS_100k_bg4_bulk_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS_100k_bg4_bulk_rep1_tec2": ["GSM5501190_A596_SLX-20231_U2OS_100k_bg4_bulk_rep1_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS_100k_None_bulk_rep1_tecx": ["GSM5501191_A598_SLX-20231_U2OS_100k_None_bulk_rep1_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_100k_bg4_bulk_rep2_tec1": ["GSM5501192_A603_SLX-20231_K562_100k_bg4_bulk_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_100k_bg4_bulk_rep2_tec2": ["GSM5501193_A604_SLX-20231_K562_100k_bg4_bulk_rep2_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_100k_None_bulk_rep2_tecx": ["GSM5501194_A606_SLX-20231_K562_100k_None_bulk_rep2_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS_100k_bg4_bulk_rep2_tec1": ["GSM5501195_A609_SLX-20231_U2OS_100k_bg4_bulk_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS_100k_bg4_bulk_rep2_tec2": ["GSM5501196_A610_SLX-20231_U2OS_100k_bg4_bulk_rep2_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS_100k_None_bulk_rep2_tecx": ["GSM5501197_A611_SLX-20231_U2OS_100k_None_bulk_rep2_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_100k_bg4_bulk_rep3_tec1": ["GSM5501198_A628_SLX-20232_K562_100k_bg4_bulk_rep3_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_100k_bg4_bulk_rep3_tec2": ["GSM5501199_A629_SLX-20232_K562_100k_bg4_bulk_rep3_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_100k_None_bulk_rep3_tecx": ["GSM5501200_A630_SLX-20232_K562_100k_None_bulk_rep3_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS_100k_bg4_bulk_rep3_tec1": ["GSM5501201_A632_SLX-20232_U2OS_100k_bg4_bulk_rep3_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS_100k_bg4_bulk_rep3_tec2": ["GSM5501202_A633_SLX-20232_U2OS_100k_bg4_bulk_rep3_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS_100k_None_bulk_rep3_tecx": ["GSM5501203_A634_SLX-20232_U2OS_100k_None_bulk_rep3_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_100k_bg4_cellNO_rep1_tec1": ["GSM5501204_A635_SLX-20232_K562_100k_bg4_cellNO_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_100k_bg4_cellNO_rep1_tec2": ["GSM5501205_A636_SLX-20232_K562_100k_bg4_cellNO_rep1_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_50k_bg4_cellNO_rep1_tec1": ["GSM5501206_A637_SLX-20232_K562_50k_bg4_cellNO_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_50k_bg4_cellNO_rep1_tec2": ["GSM5501207_A638_SLX-20232_K562_50k_bg4_cellNO_rep1_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_10k_bg4_cellNO_rep1_tec1": ["GSM5501208_A639_SLX-20232_K562_10k_bg4_cellNO_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_10k_bg4_cellNO_rep1_tec2": ["GSM5501209_A640_SLX-20232_K562_10k_bg4_cellNO_rep1_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_100k_None_cellNO_rep1_tecx": ["GSM5501210_A645_SLX-20232_K562_100k_None_cellNO_rep1_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_50k_None_cellNO_rep1_tecx": ["GSM5501211_A646_SLX-20232_K562_50k_None_cellNO_rep1_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_10k_None_cellNO_rep1_tecx": ["GSM5501212_A647_SLX-20232_K562_10k_None_cellNO_rep1_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_100k_bg4_cellNO_rep2_tec1": ["GSM5501213_A651_SLX-20232_K562_100k_bg4_cellNO_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_100k_bg4_cellNO_rep2_tec2": ["GSM5501214_A652_SLX-20232_K562_100k_bg4_cellNO_rep2_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_50k_bg4_cellNO_rep2_tec1": ["GSM5501215_A653_SLX-20232_K562_50k_bg4_cellNO_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_50k_bg4_cellNO_rep2_tec2": ["GSM5501216_A654_SLX-20232_K562_50k_bg4_cellNO_rep2_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_10k_bg4_cellNO_rep2_tec1": ["GSM5501217_A655_SLX-20232_K562_10k_bg4_cellNO_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_10k_bg4_cellNO_rep2_tec2": ["GSM5501218_A656_SLX-20232_K562_10k_bg4_cellNO_rep2_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_100k_None_cellNO_rep2_tecx": ["GSM5501219_A661_SLX-20232_K562_100k_None_cellNO_rep2_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_50k_None_cellNO_rep2_tecx": ["GSM5501220_A662_SLX-20232_K562_50k_None_cellNO_rep2_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "K562_10k_None_cellNO_rep2_tecx": ["GSM5501221_A663_SLX-20232_K562_10k_None_cellNO_rep2_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS_10k_bg4_10X_5th_ref_rep1_tec1": ["GSM5501222_A672_2_SLX-20522_U2OS_10k_bg4_10X_5th_ref_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "MCF7_10k_bg4_10X_5th_ref_rep1_tec1": ["GSM5501223_A673_2_SLX-20523_MCF7_10k_bg4_10X_5th_ref_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "MCF7_50k_bg4_MCF7_1st_rep1_tec1": ["GSM5501224_A678_SLX-20524_MCF7_50k_bg4_MCF7_1st_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "MCF7_50k_bg4_MCF7_1st_rep1_tec2": ["GSM5501225_A679_SLX-20525_MCF7_50k_bg4_MCF7_1st_rep1_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "MCF7_10k_bg4_MCF7_1st_rep1_tec1": ["GSM5501226_A680_SLX-20526_MCF7_10k_bg4_MCF7_1st_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "MCF7_50k_none_MCF7_1st_rep1_tec1": ["GSM5501227_A683_SLX-20529_MCF7_50k_none_MCF7_1st_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "MCF7_10k_none_MCF7_1st_rep1_tec1": ["GSM5501228_A684_SLX-20530_MCF7_10k_none_MCF7_1st_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "MCF7_50k_bg4_MCF7_2nd_rep2_tec1": ["GSM5501229_A687_SLX-20533_MCF7_50k_bg4_MCF7_2nd_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "MCF7_50k_bg4_MCF7_2nd_rep2_tec2": ["GSM5501230_A688_SLX-20534_MCF7_50k_bg4_MCF7_2nd_rep2_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "MCF7_10k_bg4_MCF7_2nd_rep2_tec1": ["GSM5501231_A689_SLX-20535_MCF7_10k_bg4_MCF7_2nd_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "MCF7_50k_none_MCF7_2nd_rep2_tec1": ["GSM5501232_A692_SLX-20538_MCF7_50k_none_MCF7_2nd_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "MCF7_10k_none_MCF7_2nd_rep2_tec1": ["GSM5501233_A693_SLX-20539_MCF7_10k_none_MCF7_2nd_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS_10k_bg4_10X_6th_ref_rep2_tec1": ["GSM5501240_A702_A_SLX-20548_U2OS_10k_bg4_10X_6th_ref_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS_MCF7_10k_bg4_10X_6th_ref_rep1_tec1": ["GSM5501241_A702_B_SLX-20549_U2OS_MCF7_10k_bg4_10X_6th_ref_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "MCF7_10k_bg4_10X_6th_ref_rep2_tec1": ["GSM5501242_A703_A_SLX-20550_MCF7_10k_bg4_10X_6th_ref_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS_rep1_single_nuclei": ["GSM5501243_SINAF8.cellranger.peak.bed.gz"], "U2OS_rep2_single_nuclei": ["GSM5501244_SINAG10.cellranger.peak.bed.gz"], "U2OS_MCF7_mix_single_nuclei": ["GSM5501245_SINAG1.cellranger.peak.bed.gz"], "MCF7_rep1_single_nuclei": ["GSM5501246_SINAH10.cellranger.peak.bed.gz"], "MCF7_rep2_single_nuclei": ["GSM5501247_SINAH1.cellranger.peak.bed.gz"], "BIOCHIP_NON_SORTED_HLCs_rep1": ["GSM5429713_BIOCHIP_NON_SORTED_HLCs_rep1.bed.gz"], "BIOCHIP_NON_SORTED_HLCs_rep2": ["GSM5429714_BIOCHIP_NON_SORTED_HLCs_rep2.bed.gz"], "BIOCHIP_NON_SORTED_HLCs_rep3": ["GSM5429715_BIOCHIP_NON_SORTED_HLCs_rep3.bed.gz"], "BIOCHIP_NON_SORTED_HLCs_rep4": ["GSM5429716_BIOCHIP_NON_SORTED_HLCs_rep4.bed.gz"], "BIOCHIP_CPM_POSTIVE_HLCs_rep1": ["GSM5429717_BIOCHIP_CPM_POSITIVE_HLCs_rep1.bed.gz"], "BIOCHIP_CPM_POSTIVE_HLCs_rep2": ["GSM5429718_BIOCHIP_CPM_POSITIVE_HLCs_rep2.bed.gz"], "BIOCHIP_CPM_POSTIVE_HLCs_rep3": ["GSM5429719_BIOCHIP_CPM_POSITIVE_HLCs_rep3.bed.gz"], "BIOCHIP_CPM_POSTIVE_HLCs_rep4": ["GSM5429720_BIOCHIP_CPM_POSITIVE_HLCs_rep4.bed.gz"], "BIOCHIP_CPM_POSTIVE_HLCs_rep5": ["GSM5429721_BIOCHIP_CPM_POSITIVE_HLCs_rep5.bed.gz"], "BIOCHIP_CPM_POSTIVE_HLCs_rep6": ["GSM5429722_BIOCHIP_CPM_POSITIVE_HLCs_rep6.bed.gz"], "BIOCHIP_CPM_POSTIVE_HLCs_rep7": ["GSM5429723_BIOCHIP_CPM_POSITIVE_HLCs_rep7.bed.gz"], "BIOCHIP_CPM_POSTIVE_HLCs_rep8": ["GSM5429724_BIOCHIP_CPM_POSITIVE_HLCs_rep8.bed.gz"], "BIOCHIP_CPM_POSTIVE_HLCs_rep9": ["GSM5429725_BIOCHIP_CPM_POSITIVE_HLCs_rep9.bed.gz"], "ChIC_GM12878_CTCF_Rep1": ["GSM5403558_CTCF_Rep1_peaks.bed.gz"], "ChIC_GM12878_CTCF_Rep2": ["GSM5403559_CTCF_Rep2_peaks.bed.gz"], "ChIC_GM12878_H3K27ac_Rep1": ["GSM5403560_H3K27ac_Rep1_peaks.bed.gz"], "ChIC_GM12878_H3K27ac_Rep2": ["GSM5403561_H3K27ac_Rep2_peaks.bed.gz"], "ChIC_GM12878_H3K4me3_Rep1": ["GSM5403562_H3K4me3_Rep1_peaks.bed.gz"], "ChIC_GM12878_H3K4me3_Rep2": ["GSM5403563_H3K4me3_Rep2_peaks.bed.gz"], "SKNAS-Vel-01": ["GSM5012393_2064692_SKNAS-Vel-01.frag-free_peaks.narrowPeak.gz"], "SKNAS-Vel-02": ["GSM5012394_2064693_SKNAS-Vel-02.frag-free_peaks.narrowPeak.gz"], "SKNAS-IR1-01": ["GSM5012395_2064694_SKNAS-IR1-01.frag-free_peaks.narrowPeak.gz"], "SKNAS-IR1-02": ["GSM5012396_2064695_SKNAS-IR1-02.frag-free_peaks.narrowPeak.gz"], "SKNAS-IR2-01": ["GSM5012397_2064696_SKNAS-IR2-01.frag-free_peaks.narrowPeak.gz"], "SKNAS-IR2-02": ["GSM5012398_2064697_SKNAS-IR2-02.frag-free_peaks.narrowPeak.gz"], "HAEC-CTRL_H3K27ac": ["GSM5694220_Ctrl_K27ac_15kb_SE_peaks.narrowPeak.gz"], "HAEC-CoCl2_H3K27ac": ["GSM5694222_Hypo_peaks.narrowPeak.gz"], "Control human monocytes, rep 1": ["GSM5558270_1_EtcA_PBrandi_ATACSeq_S5.hg38_peaks.narrowPeak.gz"], "Treated human monocytes, rep 1": ["GSM5558271_2_MV130A_PBrandi_ATACSeq_S6.hg38_peaks.narrowPeak.gz"], "Control human monocytes, rep 2": ["GSM5558272_3_EtcB_PBrandi_ATACSeq_S7.hg38_peaks.narrowPeak.gz"], "Treated human monocytes, rep 2": ["GSM5558273_4_MV130B_PBrandi_ATACSeq_S8.hg38_peaks.narrowPeak.gz"], "Control human monocytes, rep 3": ["GSM5558274_5_EtcC_PBrandi_ATACSeq_S9.hg38_peaks.narrowPeak.gz"], "Treated human monocytes, rep 3": ["GSM5558275_6_MV130C_PBrandi_ATACSeq_S10.hg38_peaks.narrowPeak.gz"], "CNCC_Rep1_3xBG4_rep1": ["GSM4909430_CNCC_Rep1_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz"], "CNCC_Rep1_3xBG4_rep2": ["GSM4909431_CNCC_Rep1_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz"], "CNCC_Rep1_3xBG4_rep4": ["GSM4909432_CNCC_Rep1_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz"], "CNCC_Rep2_3xBG4_rep1": ["GSM4909433_CNCC_Rep2_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz"], "CNCC_Rep2_3xBG4_rep3": ["GSM4909434_CNCC_Rep2_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz"], "CNCC_Rep2_3xBG4_rep4": ["GSM4909435_CNCC_Rep2_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz"], "CNCC_Rep3_3xBG4_rep2": ["GSM4909436_CNCC_Rep3_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz"], "CNCC_Rep3_3xBG4_rep3": ["GSM4909437_CNCC_Rep3_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz"], "CNCC_Rep3_3xBG4_rep4": ["GSM4909438_CNCC_Rep3_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz"], "ESC_Rep1_3xBG4_rep1": ["GSM4909439_ESC_Rep1_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz"], "ESC_Rep1_3xBG4_rep2": ["GSM4909440_ESC_Rep1_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz"], "ESC_Rep1_3xBG4_rep4": ["GSM4909441_ESC_Rep1_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz"], "ESC_Rep2_3xBG4_rep2": ["GSM4909442_ESC_Rep2_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz"], "ESC_Rep2_3xBG4_rep3": ["GSM4909443_ESC_Rep2_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz"], "ESC_Rep2_3xBG4_rep4": ["GSM4909444_ESC_Rep2_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz"], "ESC_Rep3_3xBG4_rep1": ["GSM4909445_ESC_Rep3_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz"], "ESC_Rep3_3xBG4_rep2": ["GSM4909446_ESC_Rep3_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz"], "ESC_Rep3_3xBG4_rep4": ["GSM4909447_ESC_Rep3_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz"], "NSC_Rep1_3xBG4_rep2": ["GSM4909448_NSC_Rep1_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz"], "NSC_Rep1_3xBG4_rep3": ["GSM4909449_NSC_Rep1_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz"], "NSC_Rep1_3xBG4_rep4": ["GSM4909450_NSC_Rep1_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz"], "NSC_Rep2_3xBG4_rep1": ["GSM4909451_NSC_Rep2_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz"], "NSC_Rep2_3xBG4_rep2": ["GSM4909452_NSC_Rep2_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz"], "NSC_Rep2_3xBG4_rep4": ["GSM4909453_NSC_Rep2_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz"], "NSC_Rep3_3xBG4_rep2": ["GSM4909454_NSC_Rep3_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz"], "NSC_Rep3_3xBG4_rep3": ["GSM4909455_NSC_Rep3_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz"], "NSC_Rep3_3xBG4_rep4": ["GSM4909456_NSC_Rep3_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz"], "NSC_Rep3b_and_3_3xBG4_rep3": ["GSM4909457_NSC_Rep3b_and_3_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz"], "CNCC_ATAC_100_bio1": ["GSM4909458_CNCC_ATAC_100_bio1.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz"], "CNCC_ATAC_100_bio2": ["GSM4909459_CNCC_ATAC_100_bio2.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz"], "CNCC_ATAC_100_bio3": ["GSM4909460_CNCC_ATAC_100_bio3.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz"], "ESC_ATAC_50_bio1": ["GSM4909461_ESC_ATAC_50_bio1.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz"], "ESC_ATAC_50_bio2": ["GSM4909462_ESC_ATAC_50_bio2.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz"], "ESC_ATAC_50_bio4": ["GSM4909463_ESC_ATAC_50_bio4.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz"], "NSC_ATAC_50_bio2": ["GSM4909464_NSC_ATAC_50_bio2.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz"], "NSC_ATAC_50_bio3": ["GSM4909465_NSC_ATAC_50_bio3.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz"], "NSC_ATAC_50_bio4": ["GSM4909466_NSC_ATAC_50_bio4.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz"], "ChIP_SMARCB1": ["GSM3484229_ChIP_SMARCB1.bed.gz"], "ChIP_H3K27ac_shCon": ["GSM3484230_ChIP_H3K27ac_shCon.bed.gz"], "ChIP_H3K27ac_shSMARCB1": ["GSM3484231_ChIP_H3K27ac_shSMARCB1.bed.gz"], "Untreated H3K27ac rep1": ["GSM5657497_Untreated_H3K27ac_rep1_peaks.bed.gz"], "Untreated H3K27ac rep2": ["GSM5657498_Untreated_H3K27ac_rep2_peaks.bed.gz"], "Cobimetinib 24hr H3K27ac rep1": ["GSM5657501_Cobimetinib_24hr_H3K27ac_rep1_peaks.bed.gz"], "Cobimetinib 24hr H3K27ac rep2": ["GSM5657502_Cobimetinib_24hr_H3K27ac_rep2_peaks.bed.gz"], "TNFalpha 24hr H3K27ac rep1": ["GSM5657505_TNFalpha_24hr_H3K27ac_rep1_peaks.bed.gz"], "TNFalpha 24hr H3K27ac rep2": ["GSM5657506_TNFalpha_24hr_H3K27ac_rep2_peaks.bed.gz"], "VCaP_DMSO_R1_8h (ATAC-seq)": ["GSM5227748_VCaP_DMSO_R1_8h.bed.gz"], "VCaP_DMSO_R2_8h (ATAC-seq)": ["GSM5227749_VCaP_DMSO_R2_8h.bed.gz"], "VCaP_DMSO_R1_24h (ATAC-seq)": ["GSM5227750_VCaP_DMSO_R1_24h.bed.gz"], "VCaP_DMSO_R2_24h (ATAC-seq)": ["GSM5227751_VCaP_DMSO_R2_24h.bed.gz"], "VCaP_AU_R1_4h (ATAC-seq)": ["GSM5227752_VCaP_AU_R1_4h.bed.gz"], "VCaP_AU_R2_4h (ATAC-seq)": ["GSM5227753_VCaP_AU_R2_4h.bed.gz"], "VCaP_AU_R1_8h (ATAC-seq)": ["GSM5227754_VCaP_AU_R1_8h.bed.gz"], "VCaP_AU_R2_8h (ATAC-seq)": ["GSM5227755_VCaP_AU_R2_8h.bed.gz"], "VCaP_AU_R1_12h (ATAC-seq)": ["GSM5227756_VCaP_AU_R1_12h.bed.gz"], "VCaP_AU_R2_12h (ATAC-seq)": ["GSM5227757_VCaP_AU_R2_12h.bed.gz"], "VCaP_AU_R1_24h (ATAC-seq)": ["GSM5227758_VCaP_AU_R1_24h.bed.gz"], "VCaP_AU_R2_24h (ATAC-seq)": ["GSM5227759_VCaP_AU_R2_24h.bed.gz"], "VCaP_ZBC260_R1_8h (ATAC-seq)": ["GSM5227760_VCaP_ZBC260_R1_8h.bed.gz"], "VCaP_ZBC260_R2_8h (ATAC-seq)": ["GSM5227761_VCaP_ZBC260_R2_8h.bed.gz"], "VCaP_ZBC260_R1_24h (ATAC-seq)": ["GSM5227762_VCaP_ZBC260_R1_24h.bed.gz"], "VCaP_ZBC260_R2_24h (ATAC-seq)": ["GSM5227763_VCaP_ZBC260_R2_24h.bed.gz"], "LNCaP_DMSO_R1_24h (ATAC-seq)": ["GSM5227764_LNCaP_DMSO_R1_24h.bed.gz"], "LNCaP_DMSO_R2_24h (ATAC-seq)": ["GSM5227765_LNCaP_DMSO_R2_24h.bed.gz"], "LNCaP_AU_R1_12h (ATAC-seq)": ["GSM5227766_LNCaP_AU_R1_12h.bed.gz"], "LNCaP_AU_R2_12h (ATAC-seq)": ["GSM5227767_LNCaP_AU_R2_12h.bed.gz"], "LNCaP_AU_R1_24h (ATAC-seq)": ["GSM5227768_LNCaP_AU_R1_24h.bed.gz"], "LNCaP_AU_R2_24h (ATAC-seq)": ["GSM5227769_LNCaP_AU_R2_24h.bed.gz"], "LNCaP_sgNC+shNC_R1_72h (ATAC-seq)": ["GSM5227770_LNCaP_sgNC+shNC_R1_72h.bed.gz"], "LNCaP_sgNC+shNC_R2_72h (ATAC-seq)": ["GSM5227771_LNCaP_sgNC+shNC_R2_72h.bed.gz"], "LNCaP_sgSMARCA2_R1 (ATAC-seq)": ["GSM5227772_LNCaP_sgSMARCA2_R1_72h.bed.gz"], "LNCaP_sgSMARCA2_R2 (ATAC-seq)": ["GSM5227773_LNCaP_sgSMARCA2_R2_72h.bed.gz"], "LNCaP_sgSMARCA4_R1 (ATAC-seq)": ["GSM5227774_LNCaP_sgSMARCA4_R1_72h.bed.gz"], "LNCaP_sgSMARCA4_R2 (ATAC-seq)": ["GSM5227775_LNCaP_sgSMARCA4_R2_72h.bed.gz"], "LNCaP_sgSMARCA2+shSMARCA4_R1_72h (ATAC-seq)": ["GSM5227776_LNCaP_sgSMARCA2+shSMARCA4_R1_72h.bed.gz"], "LNCaP_sgSMARCA2+shSMARCA4_R2_72h (ATAC-seq)": ["GSM5227777_LNCaP_sgSMARCA2+shSMARCA4_R2_72h.bed.gz"], "AU-CBH-15330 @1uM for 0.5h-R1": ["GSM5655507_SI_30278.bed.gz"], "AU-CBH-15330 @1uM for 0.5h-R2": ["GSM5655508_SI_30279.bed.gz"], "AU-CBH-15330 @1uM for 1h-R1": ["GSM5655509_SI_30280.bed.gz"], "AU-CBH-15330 @1uM for 1h-R2": ["GSM5655510_SI_30281.bed.gz"], "WTC11-1 replicate 1": ["GSM5625727_WTC11-1_rep1.count.bed.gz"], "WTC11-1 replicate 2": ["GSM5625728_WTC11-1_rep2.count.bed.gz"], "WTC11-1 replicate 3": ["GSM5625729_WTC11-1_rep3.count.bed.gz"], "WTC11-3 replicate 1": ["GSM5625730_WTC11-3_rep1.count.bed.gz"], "WTC11-3 replicate 2": ["GSM5625731_WTC11-3_rep2.count.bed.gz"], "WTC11-3 replicate 3": ["GSM5625732_WTC11-3_rep3.count.bed.gz"], "293T_MeRIP_rep1_treated": ["GSM5623223_IP1_peak.bed.gz"], "293T_MeRIP_rep2_treated": ["GSM5623224_IP2_peak.bed.gz"], "293T_ORL_rep1_treated": ["GSM5623227_total_peak.bed.gz"], "293T_ORL_rep2_treated": ["GSM5623229_mRNA1_peak.bed.gz"], "A431-GOF-IP1": ["GSM5345077_Input1-IP1.bed.gz"], "A431-GOF-IP2": ["GSM5345078_Input2-IP2.bed.gz"], "TBXT-NEG": ["GSM5593831_015VSheffield_Brachyury_ucsctracks_NEG_score.bed.gz"], "TBXT-POS": ["GSM5593832_015VSheffield_Brachyury_ucsctracks_POs_score.bed.gz"], "Hu1545_H3K4me3": ["GSM5133441_45_Chip_K4me3.bed.gz"], "Hu1545_H3K4me1": ["GSM5133442_45_Chip_K4me1.bed.gz"], "Hu1545_H3K27ac": ["GSM5133443_45_Chip_K27Ac.bed.gz"], "Hu1545_H3K27me3": ["GSM5133444_Hu1545_H3K27me3.bed.gz"], "Hu1545_ATAC": ["GSM5133445_Hu1545-ATAC.bed.gz"], "Hu1545_HCV_H3K4me3": ["GSM5133447_45_HCV_K4me3.bed.gz"], "Hu1545_HCV_H3K4me1": ["GSM5133448_45_HCV_K4me1.bed.gz"], "Hu1545_HCV_H3K27ac": ["GSM5133449_45_HCV_K27Ac.bed.gz"], "Hu1545_HCV_H3K27me3": ["GSM5133450_Hu1545_HCV_H3K27me3.bed.gz"], "Hu1545_HCV_ATAC": ["GSM5133451_Hu1545_HCV-ATAC.bed.gz"], "Huh7.5_H3K4me3": ["GSM5133453_7_5_Chip_K4me3.bed.gz"], "Huh7.5_H3K4me1": ["GSM5133454_7_5_Chip_K4me1.bed.gz"], "Huh7.5_H3K27ac": ["GSM5133455_7_5_Chip_K27Ac.bed.gz"], "Huh7.5_H3K27me3": ["GSM5133456_Huh75_H3K27me3.bed.gz"], "Huh7.5_ATAC": ["GSM5133457_Huh75-ATAC.bed.gz"], "Huh7.5_HCV_H3K4me3": ["GSM5133459_7_5_HCV_K4me3.bed.gz"], "Huh7.5_HCV_H3K4me1": ["GSM5133460_7_5_HCV_K4me1.bed.gz"], "Huh7.5_HCV_H3K27ac": ["GSM5133461_7_5_HCV_K27Ac.bed.gz"], "Huh7.5_HCV_H3K27me3": ["GSM5133462_Huh75_HCV_H3K27me3.bed.gz"], "Huh7.5_HCV_ATAC": ["GSM5133463_Huh75_HCV-ATAC.bed.gz"], "V16D-Rep1-H3K4me3": ["GSM5575318_V16D-Rep1-H3K4me3_peaks.narrowPeak.gz"], "V16D-Rep2-H3K4me3": ["GSM5575319_V16D-Rep2-H3K4me3_peaks.narrowPeak.gz"], "V16D-Rep3-H3K4me3": ["GSM5575320_V16D-Rep3-H3K4me3_peaks.narrowPeak.gz"], "V16D-Rep1-H3K27me3": ["GSM5575321_V16D-Rep1-H3K27me3_peaks.broadPeak.gz"], "V16D-Rep2-H3K27me3": ["GSM5575322_V16D-Rep2-H3K27me3_peaks.broadPeak.gz"], "V16D-Rep3-H3K27me3": ["GSM5575323_V16D-Rep3-H3K27me3_peaks.broadPeak.gz"], "V16D-H19-Rep1-H3K4me3": ["GSM5575327_V16D-H19-Rep1-H3K4me3_peaks.narrowPeak.gz"], "V16D-H19-Rep2-H3K4me3": ["GSM5575328_V16D-H19-Rep2-H3K4me3_peaks.narrowPeak.gz"], "V16D-H19-Rep3-H3K4me3": ["GSM5575329_V16D-H19-Rep3-H3K4me3_peaks.narrowPeak.gz"], "V16D-H19-Rep1-H3K27me3": ["GSM5575330_V16D-H19-Rep1-H3K27me3_peaks.broadPeak.gz"], "V16D-H19-Rep2-H3K27me3": ["GSM5575331_V16D-H19-Rep2-H3K27me3_peaks.broadPeak.gz"], "V16D-H19-Rep3-H3K27me3": ["GSM5575332_V16D-H19-Rep3-H3K27me3_peaks.broadPeak.gz"], "HCT116 Control replicate 1": ["GSM4831428_Ctrl_1_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 Control replicate 2": ["GSM4831429_Ctrl_2_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 Control replicate 3": ["GSM4831430_Ctrl_3_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 CNOT1 knockdown replicate 1": ["GSM4831431_CNOT1_KO_1_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 CNOT1 knockdown replicate 2": ["GSM4831432_CNOT1_KO_2_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 CNOT1 knockdown replicate 3": ["GSM4831433_CNOT1_KO_3_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 CNOT7 CNOT8 knockdown replicate 1": ["GSM4831434_CNOT7_8_KO_1_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 CNOT7 CNOT8 knockdown replicate 2": ["GSM4831435_CNOT7_8_KO_2_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 CNOT7 CNOT8 knockdown replicate 3": ["GSM4831436_CNOT7_8_KO_3_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 PUM1 PUM2 knockdown replicate 1": ["GSM4831437_PUM1_2_KO_1_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 PUM1 PUM2 knockdown replicate 2": ["GSM4831438_PUM1_2_KO_2_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 PUM1 PUM2 knockdown replicate 3": ["GSM4831439_PUM1_2_KO_3_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 PUM1 knockdown replicate 1": ["GSM4831440_PUM1_KO_1_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 PUM1 knockdown replicate 2": ["GSM4831441_PUM1_KO_2_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 PUM1 knockdown replicate 3": ["GSM4831442_PUM1_KO_3_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 PUM2 knockdown replicate 1": ["GSM4831443_PUM2_KO_1_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 PUM2 knockdown replicate 2": ["GSM4831444_PUM2_KO_2_Hisat2-mapping_3prime-ends.bed.gz"], "HCT116 PUM2 knockdown replicate 3": ["GSM4831445_PUM2_KO_3_Hisat2-mapping_3prime-ends.bed.gz"], "LNCaP DMSO [scATAC-seq]": ["GSM5155451_LNCaP-DMSO_peaks.bed.gz"], "LNCaP ENZ 48hrs [scATAC-seq]": ["GSM5155452_LNCaP-ENZ48_peaks.bed.gz"], "LNCaP RES-A [scATAC-seq]": ["GSM5155453_LNCaP-RESA_peaks.bed.gz"], "LNCaP RES-B [scATAC-seq]": ["GSM5155454_LNCaP-RESB_peaks.bed.gz"], "H2107_KRAS_Dox_nodrug-N1": ["GSM4869010_H2107_KRAS_Dox_nodrug-N1.hg38_peaks.narrowPeak.gz"], "H2107_KRAS_Dox_nodrug-N2": ["GSM4869011_H2107_KRAS_Dox_nodrug-N2.hg38_peaks.narrowPeak.gz"], "H2107_KRAS_Dox_nodrug-N3": ["GSM4869012_H2107_KRAS_Dox_nodrug-N3.hg38_peaks.narrowPeak.gz"], "H2107_KRAS_Dox_SCH-N1": ["GSM4869013_H2107_KRAS_Dox_SCH-N1.hg38_peaks.narrowPeak.gz"], "H2107_KRAS_Dox_SCH-N2": ["GSM4869014_H2107_KRAS_Dox_SCH-N2.hg38_peaks.narrowPeak.gz"], "H2107_KRAS_Dox_SCH-N3": ["GSM4869015_H2107_KRAS_Dox_SCH-N3.hg38_peaks.narrowPeak.gz"], "H2107_KRAS_nodox_nodrug-N1": ["GSM4869016_H2107_KRAS_nodox_nodrug-N1.hg38_peaks.narrowPeak.gz"], "H2107_KRAS_nodox_nodrug-N2": ["GSM4869017_H2107_KRAS_nodox_nodrug-N2.hg38_peaks.narrowPeak.gz"], "H2107_KRAS_nodox_nodrug-N3": ["GSM4869018_H2107_KRAS_nodox_nodrug-N3.hg38_peaks.narrowPeak.gz"], "H524_KRAS_Dox_nodrug-N1": ["GSM4869019_H524_KRAS_Dox_nodrug-N1.hg38_peaks.narrowPeak.gz"], "H524_KRAS_Dox_nodrug-N2": ["GSM4869020_H524_KRAS_Dox_nodrug-N2.hg38_peaks.narrowPeak.gz"], "H524_KRAS_Dox_nodrug-N3": ["GSM4869021_H524_KRAS_Dox_nodrug-N3.hg38_peaks.narrowPeak.gz"], "H524_KRAS_Dox_SCH-N1": ["GSM4869022_H524_KRAS_Dox_SCH-N1.hg38_peaks.narrowPeak.gz"], "H524_KRAS_Dox_SCH-N2": ["GSM4869023_H524_KRAS_Dox_SCH-N2.hg38_peaks.narrowPeak.gz"], "H524_KRAS_Dox_SCH-N3": ["GSM4869024_H524_KRAS_Dox_SCH-N3.hg38_peaks.narrowPeak.gz"], "H524_KRAS_nodox_nodrug-N1": ["GSM4869025_H524_KRAS_nodox_nodrug-N1.hg38_peaks.narrowPeak.gz"], "H524_KRAS_nodox_nodrug-N2": ["GSM4869026_H524_KRAS_nodox_nodrug-N2.hg38_peaks.narrowPeak.gz"], "H524_KRAS_nodox_nodrug-N3": ["GSM4869027_H524_KRAS_nodox_nodrug-N3.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_A485-400uM-N1": ["GSM4869028_H82_KRAS_Dox_A485-400uM-N1.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_A485-400uM-N2": ["GSM4869029_H82_KRAS_Dox_A485-400uM-N2.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_A485-400uM-N3": ["GSM4869030_H82_KRAS_Dox_A485-400uM-N3.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_nodrug-N1": ["GSM4869031_H82_KRAS_Dox_nodrug-N1.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_nodrug-N2": ["GSM4869032_H82_KRAS_Dox_nodrug-N2.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_nodrug-N3": ["GSM4869033_H82_KRAS_Dox_nodrug-N3.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_SB-5uM-N1": ["GSM4869034_H82_KRAS_Dox_SB-5uM-N1.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_SB-5uM-N2": ["GSM4869035_H82_KRAS_Dox_SB-5uM-N2.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_SB-5uM-N3": ["GSM4869036_H82_KRAS_Dox_SB-5uM-N3.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_SB-A485-N1": ["GSM4869037_H82_KRAS_Dox_SB-A485-N1.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_SB-A485-N2": ["GSM4869038_H82_KRAS_Dox_SB-A485-N2.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_SB-A485-N3": ["GSM4869039_H82_KRAS_Dox_SB-A485-N3.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_SCH-1uM-N1": ["GSM4869040_H82_KRAS_Dox_SCH-1uM-N1.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_SCH-1uM-N2": ["GSM4869041_H82_KRAS_Dox_SCH-1uM-N2.hg38_peaks.narrowPeak.gz"], "H82_KRAS_Dox_SCH-1uM-N3": ["GSM4869042_H82_KRAS_Dox_SCH-1uM-N3.hg38_peaks.narrowPeak.gz"], "H82_KRAS_nodox_nodrug-N1": ["GSM4869043_H82_KRAS_nodox_nodrug-N1.hg38_peaks.narrowPeak.gz"], "H82_KRAS_nodox_nodrug-N2": ["GSM4869044_H82_KRAS_nodox_nodrug-N2.hg38_peaks.narrowPeak.gz"], "H82_KRAS_nodox_nodrug-N3": ["GSM4869045_H82_KRAS_nodox_nodrug-N3.hg38_peaks.narrowPeak.gz"], "LT_HSC_GP91_1 [ATAC-Seq]": ["GSM4658367_LT_HSC_GP91_1.narrowPeak.gz"], "LT_HSC_GP91_2 [ATAC-Seq]": ["GSM4658368_LT_HSC_GP91_2.narrowPeak.gz"], "LT_HSC_GP91_3 [ATAC-Seq]": ["GSM4658369_LT_HSC_GP91_3.narrowPeak.gz"], "LT_HSC_TFEB_1 [ATAC-Seq]": ["GSM4658370_LT_HSC_TFEB_OE_1.narrowPeak.gz"], "LT_HSC_TFEB_2 [ATAC-Seq]": ["GSM4658371_LT_HSC_TFEB_OE_2.narrowPeak.gz"], "LT_HSC_TFEB_3 [ATAC-Seq]": ["GSM4658372_LT_HSC_TFEB_OE_3.narrowPeak.gz"], "FGFR1_ChIP-Seq Rep1": ["GSM4515957_macs2_MCF7_NLS_Rep1_peaks_peaks.narrowPeak.bed.gz"], "FGFR1_ChIP-Seq Rep2": ["GSM4515958_macs2_MCF7_NLS_Rep2_peaks_peaks.narrowPeak.bed.gz"], "FGFR1_ChIP-Seq Rep3": ["GSM4515959_macs2_MCF7_NLS_Rep3_peaks_peaks.narrowPeak.bed.gz"], "CAMA1_FGFR1_ChIP-Seq Rep1": ["GSM4460124_macs2_ctrl_FGFR-rep1_peaks_peaks.narrowPeak.gz"], "CAMA1_FGFR1_ChIP-Seq Rep2": ["GSM4460125_macs2_ctrl_FGFR-rep2_peaks_peaks.narrowPeak.gz"], "CAMA1_H3K27ac_ChIP-Seq Rep1": ["GSM4460127_macs2_ctrl-H3K27ac-rep1_peaks_peaks.narrowPeak.gz"], "CAMA1_H3K27ac_ChIP-Seq Rep2": ["GSM4460128_macs2_ctrl-H3K27ac-rep2_peaks_peaks.narrowPeak.gz"], "CAMA1_H3K4me3_ChIP-Seq Rep1": ["GSM4460130_macs2_ctrl_H3K4ME3-rep1_peaks_peaks.narrowPeak.gz"], "CAMA1_H3K4me3_ChIP-Seq Rep2": ["GSM4460131_macs2_ctrl_H3K4ME3-rep2_peaks_peaks.narrowPeak.gz"], "CAMA1_Pol II S5P_ChIP-Seq_Rep1": ["GSM4460133_macs2_ctrl_RNAPOLII-rep1_peaks_peaks.narrowPeak.gz"], "CAMA1_Pol II S5P_ChIP-Seq_Rep2": ["GSM4460134_macs2_ctrl_RNAPOLII-rep2_peaks_peaks.narrowPeak.gz"], "CAMA1_FOXA1_ChIP-Seq_Rep1": ["GSM4460136_macs2_ctrl-FOXA2-rep1_peaks_peaks.narrowPeak.gz"], "CAMA1_FOXA1_ChIP-Seq_Rep2": ["GSM4460137_macs2_ctrl-FOXA2-rep2_peaks_peaks.narrowPeak.gz"], "CAMA1_siNT_FGFR1_ChIP-Seq Rep1": ["GSM4460139_macs2_siNC_FGFR-rep1_peaks_peaks.narrowPeak.gz"], "CAMA1_siNT_FGFR1_ChIP-Seq Rep2": ["GSM4460140_macs2_siNC_FGFR-rep2_peaks_peaks.narrowPeak.gz"], "CAMA1_siFOXA1_FGFR1_ChIP-Seq Rep1": ["GSM4460142_macs2_siFOXA1_FGFR-rep1_peaks_peaks.narrowPeak.gz"], "CAMA1_siFOXA1_FGFR1_ChIP-Seq Rep2": ["GSM4460143_macs2_siFOXA1_FGFR-rep2_peaks_peaks.narrowPeak.gz"], "TCF7L2": ["GSM5433768_Atrocyte_TCF7L2_peaks.bed.gz"], "Control N-FL - GATA1": ["GSM4859815_N_Ctrl_GATA.MACS2.peaks.bed.gz"], "Control T21-FL - GATA1": ["GSM4859816_T21_Ctrl_GATA.MACS2.peaks.bed.gz"], "GATA1s N-FL - GATA1": ["GSM4859817_N_G_GATA.MACS2.peaks.bed.gz"], "GATA1s T21-FL - GATA1": ["GSM4859818_T21_G_GATA.MACS2.peaks.bed.gz"], "Naive_BRG1_WT": ["GSM5121147_Naive_BRG1_WT.narrowPeak.gz"], "Naive_BRG1_HET": ["GSM5121148_Naive_BRG1_HET.narrowPeak.gz"], "Naive_BRG1_KO_rep1": ["GSM5121149_Naive_BRG1_KO_rep1.narrowPeak.gz"], "Naive_BRG1_KO_rep2": ["GSM5121150_Naive_BRG1_KO_rep2.narrowPeak.gz"], "Re-Priming_BRG1_WT": ["GSM5121151_Re-Priming_BRG1_WT.narrowPeak.gz"], "Re-Priming_BRG1_HET": ["GSM5121152_Re-Priming_BRG1_HET.narrowPeak.gz"], "Re-Priming_BRG1_KO_rep1": ["GSM5121153_Re-Priming_BRG1_KO_rep1.narrowPeak.gz"], "Re-Priming_BRG1_KO_rep2": ["GSM5121154_Re-Priming_BRG1_KO_rep2.narrowPeak.gz"], "Re-Priming_BRG1_KO_rep3": ["GSM5121155_Re-Priming_BRG1_KO_rep3.narrowPeak.gz"], "Primed_BRG1_WT": ["GSM5121156_Primed_BRG1_WT.narrowPeak.gz"], "Primed_BRG1_HET": ["GSM5121157_Primed_BRG1_HET.narrowPeak.gz"], "KLF4_naive_rep1": ["GSM5121218_KLF4_naive_rep1.narrowPeak.gz"], "KLF4_naive_rep2": ["GSM5121219_KLF4_naive_rep2.narrowPeak.gz"], "KLF4_primed": ["GSM5121220_KLF4_primed.narrowPeak.gz"], "DDIT3_CTCF_1": ["GSM4656262_DDIT3-N_CTCF_narrow_Peaks.bed.gz"], "DDIT3_DDIT3_1": ["GSM4656263_DDIT3-N_DDIT3_narrow_Peaks.bed.gz"], "DDIT3_H3K27ac_1": ["GSM4656264_DDIT3-Z-H3K27ac_broad_Peaks.bed.gz"], "DDIT3_H3K27me3_1": ["GSM4656265_DDIT3-O_H3K27me3_broad_Peaks.bed.gz"], "DDIT3_CTCF_2": ["GSM4656266_DDIT3-T-CTCF_narrow_Peaks.bed.gz"], "DDIT3_DDIT3_2": ["GSM4656267_DDIT3-T-DDIT3_narrow_Peaks.bed.gz"], "DDIT3_H3K27ac_2": ["GSM4656268_DDIT3-T-H3K27ac_broad_Peaks.bed.gz"], "DDIT3_H3K27me3_2": ["GSM4656269_DDIT3-T-H3K27me3_broad_Peaks.bed.gz"], "EWS-FLI1_CTCF_1": ["GSM4656270_EWS-FLI1-G_CTCF_narrow_Peaks.bed.gz"], "EWS-FLI1_H3K27ac_1": ["GSM4656271_EWS-FLI1-G_H3K27ac_broad_Peaks.bed.gz"], "EWS-FLI1_H3K27me3_1": ["GSM4656272_EWS-FLI1-G_H3K27me3_broad_Peaks.bed.gz"], "EWS-FLI1_CTCF_2": ["GSM4656273_EWS-FLI1-HI-CTCF_narrow_Peaks.bed.gz"], "EWS-FLI1_H3K27ac_2": ["GSM4656274_EWS-FLI1-HI-H3K27ac_broad_Peaks.bed.gz"], "EWS-FLI1_H3K27me3_2": ["GSM4656275_EWS-FLI1-HI-H3k27me3_broad_Peaks.bed.gz"], "FUS-DDIT3_CTCF_1": ["GSM4656276_FUS-DDIT3-E_CTCF_narrow_Peaks.bed.gz"], "FUS-DDIT3_CTCF_2": ["GSM4656277_FUS-DDIT3-S-CTCF_narrow_Peaks.bed.gz"], "FUS-DDIT3_H3K27ac_1": ["GSM4656278_FUS-DDIT3-D_H3K27ac_broad_Peaks.bed.gz"], "FUS-DDIT3_H3K27me3_1": ["GSM4656279_FUS-DDIT3-D_H3K27me3_broad_Peaks.bed.gz"], "FUS-DDIT3_DDIT3_1": ["GSM4656280_FUS-DDIT3-E_DDIT3_narrow_Peaks.bed.gz"], "FUS-DDIT3_H3K27ac_2": ["GSM4656281_FUS-DDIT3-R-H3K27ac_broad_Peaks.bed.gz"], "FUS-DDIT3_H3K27me3_2": ["GSM4656282_FUS-DDIT3-R-H3K27me3_broad_Peaks.bed.gz"], "FUS-DDIT3_DDIT3_2": ["GSM4656283_FUS-DDIT3-S-DDIT3_narrow_Peaks.bed.gz"], "WT_CTCF_1": ["GSM4656284_WT-A_CTCF_narrow_Peaks.bed.gz"], "WT_H3K27me3_1": ["GSM4656285_WT-A_H3K27me3_broad_Peaks.bed.gz"], "WT_DDIT3_2": ["GSM4656286_WT-B-DDIT3_narrow_Peaks.bed.gz"], "WT_DDIT3_1": ["GSM4656287_WT-C_DDIT3_narrow_Peaks.bed.gz"], "WT_H3K27ac_1": ["GSM4656288_WT-C_H3K27ac_broad_Peaks.bed.gz"], "WT_CTCF_2": ["GSM4656289_WT-X-CTCF_narrow_Peaks.bed.gz"], "WT_H3K27ac_2": ["GSM4656290_WT-X-H3K27ac_broad_Peaks.bed.gz"], "WT_H3K27me3_2": ["GSM4656291_WT-X-H3K27me3_broad_Peaks.bed.gz"], "hESC_Naive_SOX2_ChIP": ["GSM4443742_XH88.bed.gz"], "hESC_Primed_SOX2_ChIP": ["GSM4443744_XH91.bed.gz"], "hESC_Naive_BRG1_ChIP": ["GSM4443747_ZM123.bed.gz"], "hESC_Naive_BAF155_ChIP": ["GSM4443748_ZM124.bed.gz"], "hESC_Primed_BRG1_ChIP": ["GSM4443749_ZM125.bed.gz"], "hESC_Primed_BAF155_ChIP": ["GSM4443750_ZM126.bed.gz"], "hESC_Naive_BRM_ChIP": ["GSM4443751_ZM156.bed.gz"], "hESC_Primed_BRM_ChIP": ["GSM5085768_XH128.bed.gz"], "hESC_Naive_SOX2_ChIP_rep2": ["GSM5085769_XH123.bed.gz"], "hESC_Primed_SOX2_ChIP_rep2": ["GSM5085770_XH124.bed.gz"], "C42B sgKIF4A rep1 [ATAC-Seq]": ["GSM5387836_C42B_sgKIF4A_1_narrow_peaks.bed.gz"], "C42B sgKIF4A rep2 [ATAC-Seq]": ["GSM5387837_C42B_sgKIF4A_2_narrow_peaks.bed.gz"], "C42B sgNC rep1 [ATAC-Seq]": ["GSM5387838_C42B_sgNC_1_narrow_peaks.bed.gz"], "C42B sgNC rep2 [ATAC-Seq]": ["GSM5387839_C42B_sgNC_2_narrow_peaks.bed.gz"], "LNCAP sgKIF4A rep1 [ATAC-Seq]": ["GSM5387840_LNCAP_sgKIF4A_1_narrow_peaks.bed.gz"], "LNCAP sgKIF4A rep2 [ATAC-Seq]": ["GSM5387841_LNCAP_sgKIF4A_2_narrow_peaks.bed.gz"], "LNCAP sgNC rep1 [ATAC-Seq]": ["GSM5387842_LNCAP_sgNC_1_narrow_peaks.bed.gz"], "LNCAP sgNC rep2 [ATAC-Seq]": ["GSM5387843_LNCAP_sgNC_2_narrow_peaks.bed.gz"], "JARID2 ChIP-seq in WT hPSCs": ["GSM4495605_1-4_JARID2_S16_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz"], "JARID2 ChIP-seq in HBL1KO #150 hPSCs": ["GSM4495606_3-4_JARID2_S22_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz"], "EED ChIP-seq in WT hiPSCs": ["GSM4497743_1-2_EED_S14_vsInput_MDRD_MQ40filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz"], "EED ChIP-seq in HBL1KO #22 hiPSCs": ["GSM4497744_3-2_EED_S20_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz"], "EED ChIP-seq in HBL1KO #150 hiPSCs": ["GSM4497745_2-3_H3K27me3_S18_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_broad_peaks.broadPeak.gz"], "H3K27me3 ChIP-seq in WT hiPSCs": ["GSM4497746_2-2_EED_S17_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz"], "H3K27me3 ChIP-seq in HBL1KO #22 hiPSCs": ["GSM4497747_1-3_H3K27me3_S15_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_broad_peaks.broadPeak.gz"], "H3K27me3 ChIP-seq in HBL1KO #150 hiPSCs": ["GSM4497748_3-3_H3K27me3_S21_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_broad_peaks.broadPeak.gz"], "EED ChIP-seq in WT hESCs": ["GSM4498399_1-2_EED_S41_vsInput_S48_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz"], "EED ChIP-seq in JARID2 KO hESCs": ["GSM4498400_3-2_EED_S43_vsInput_S48_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz"], "ATAC-Seq A2780 control": ["GSM5261787_A2780_cont_final.narrowPeak.gz"], "ATAC-Seq A2780cis control": ["GSM5261788_A2780cis_cont_final.narrowPeak.gz"], "ATAC-Seq A2780 cisplatin": ["GSM5261789_A2780_cisplatin_final.narrowPeak.gz"], "ATAC-Seq A2780cis cisplatin": ["GSM5261790_A2780cis_cisplatin_final.narrowPeak.gz"], "ctrl_B": ["GSM4872079_ctrl_B.narrowPeak.gz"], "ctrl_PB": ["GSM4872080_ctrl_PB.narrowPeak.gz"], "ctrl_PS": ["GSM4872081_ctrl_PS.narrowPeak.gz"], "treat_B": ["GSM4872083_treat_B_peaks.narrowPeak.gz"], "treat_PB": ["GSM4872084_treat_PB.narrowPeak.gz"], "treat_PS": ["GSM4872085_treat_PS.narrowPeak.gz"], "ctrl_In_3k27ac": ["GSM4872087_ctrl_h3k27ac.narrowPeak.gz"], "treat_In_3k27ac": ["GSM4872089_treat_h3k27ac.narrowPeak.gz"], "VCaP acK609-AR Vehicle": ["GSM4959453_moffitt_Untrt_peaks.narrowPeak.gz"], "VCaP acK609-AR (R)-9b": ["GSM4959454_moffitt_R9bMS_peaks.narrowPeak.gz"], "LNCaP Veh": ["GSM5775768_LnCaP_unt_peaks.narrowPeak.gz"], "LNCaP Res": ["GSM5775769_LnCaP_res_peaks.narrowPeak.gz"], "LNCaP Res+R(9b)": ["GSM5775770_LnCaP_sen_peaks.narrowPeak.gz"], "HCT116_bruseq_rep1": ["GSM4878563_HCT116_bruseq_rep1.genes.bed.gz"], "HCT116_bruseq_rep2": ["GSM4878564_HCT116_bruseq_rep2.genes.bed.gz"], "HCT116_bruseq_rep3": ["GSM4878565_HCT116_bruseq_rep3.genes.bed.gz"], "HCT116_bruseq_rep4": ["GSM4878566_HCT116_bruseq_rep4.genes.bed.gz"], "HCT116_bruseq_rep5": ["GSM4878567_HCT116_bruseq_rep5.genes.bed.gz"], "HeLa_bruseq_rep1": ["GSM4878568_HeLa_bruseq_rep1.genes.bed.gz"], "HeLa_bruseq_rep2": ["GSM4878569_HeLa_bruseq_rep2.genes.bed.gz"], "HeLa_bruseq_rep3": ["GSM4878570_HeLa_bruseq_rep3.genes.bed.gz"], "HeLa_bruseq_rep4": ["GSM4878571_HeLa_bruseq_rep4.genes.bed.gz"], "HeLa_bruseq_rep5": ["GSM4878572_HeLa_bruseq_rep5.genes.bed.gz"], "HeLa_bruseq_rep6": ["GSM4878573_HeLa_bruseq_rep6.genes.bed.gz"], "HeLa_bruseq_rep7": ["GSM4878574_HeLa_bruseq_rep7.genes.bed.gz"], "HF1_bruseq_rep1": ["GSM4878575_HF1_bruseq_rep1.genes.bed.gz"], "HF1_bruseq_rep2": ["GSM4878576_HF1_bruseq_rep2.genes.bed.gz"], "HF1_bruseq_rep3": ["GSM4878577_HF1_bruseq_rep3.genes.bed.gz"], "HF1_bruseq_rep4": ["GSM4878578_HF1_bruseq_rep4.genes.bed.gz"], "K562_bruseq_rep1": ["GSM4878579_K562_bruseq_rep1.genes.bed.gz"], "K562_bruseq_rep2": ["GSM4878580_K562_bruseq_rep2.genes.bed.gz"], "K562_bruseq_rep3": ["GSM4878581_K562_bruseq_rep3.genes.bed.gz"], "K562_bruseq_rep4": ["GSM4878582_K562_bruseq_rep4.genes.bed.gz"], "K562_bruseq_rep5": ["GSM4878583_K562_bruseq_rep5.genes.bed.gz"], "MiaPaCa_bruseq_rep1": ["GSM4878584_MiaPaCa_bruseq_rep1.genes.bed.gz"], "MiaPaCa_bruseq_rep2": ["GSM4878585_MiaPaCa_bruseq_rep2.genes.bed.gz"], "MiaPaCa_bruseq_rep3": ["GSM4878586_MiaPaCa_bruseq_rep3.genes.bed.gz"], "MiaPaCa_bruseq_rep4": ["GSM4878587_MiaPaCa_bruseq_rep4.genes.bed.gz"], "MiaPaCa_bruseq_rep5": ["GSM4878588_MiaPaCa_bruseq_rep5.genes.bed.gz"], "MiaPaCa_bruseq_rep6": ["GSM4878589_MiaPaCa_bruseq_rep6.genes.bed.gz"], "MiaPaCa_bruseq_rep7": ["GSM4878590_MiaPaCa_bruseq_rep7.genes.bed.gz"], "MiaPaCa_bruseq_rep8": ["GSM4878591_MiaPaCa_bruseq_rep8.genes.bed.gz"], "Panc1_bruseq_rep1": ["GSM4878592_Panc1_bruseq_rep1.genes.bed.gz"], "Panc1_bruseq_rep2": ["GSM4878593_Panc1_bruseq_rep2.genes.bed.gz"], "Panc1_bruseq_rep3": ["GSM4878594_Panc1_bruseq_rep3.genes.bed.gz"], "Panc1_bruseq_rep4": ["GSM4878595_Panc1_bruseq_rep4.genes.bed.gz"], "HCT116_bruChaseseq_rep1": ["GSM4878596_HCT116_bruChaseseq_rep1.genes.bed.gz"], "HeLa_bruChaseseq_rep1": ["GSM4878597_HeLa_bruChaseseq_rep1.genes.bed.gz"], "HeLa_bruChaseseq_rep2": ["GSM4878598_HeLa_bruChaseseq_rep2.genes.bed.gz"], "HeLa_bruChaseseq_rep3": ["GSM4878599_HeLa_bruChaseseq_rep3.genes.bed.gz"], "HF1_bruChaseseq_rep1": ["GSM4878600_HF1_bruChaseseq_rep1.genes.bed.gz"], "HF1_bruChaseseq_rep2": ["GSM4878601_HF1_bruChaseseq_rep2.genes.bed.gz"], "HF1_bruChaseseq_rep3": ["GSM4878602_HF1_bruChaseseq_rep3.genes.bed.gz"], "K562_bruChaseseq_rep1": ["GSM4878603_K562_bruChaseseq_rep1.genes.bed.gz"], "K562_bruChaseseq_rep2": ["GSM4878604_K562_bruChaseseq_rep2.genes.bed.gz"], "K562_bruChaseseq_rep3": ["GSM4878605_K562_bruChaseseq_rep3.genes.bed.gz"], "K562_bruChaseseq_rep4": ["GSM4878606_K562_bruChaseseq_rep4.genes.bed.gz"], "MiaPaCa_bruChaseseq_rep1": ["GSM4878607_MiaPaCa_bruChaseseq_rep1.genes.bed.gz"], "Panc1_bruChaseseq_rep1": ["GSM4878608_Panc1_bruChaseseq_rep1.genes.bed.gz"], "Panc1_bruChaseseq_rep2": ["GSM4878609_Panc1_bruChaseseq_rep2.genes.bed.gz"], "ATAC-seq FSHD iPSC control #1": ["GSM4494719_MACS_15491X03_FSHD_controlA_peaks.narrowPeak.gz"], "ATAC-seq FSHD iPSC control #2": ["GSM4494720_MACS_15491X04_FSHD_controlB_peaks.narrowPeak.gz"], "ATAC-seq FSHD iPSC doxorubicin #1": ["GSM4494721_MACS_15491X01_FSHD_doxo_A_peaks.narrowPeak.gz"], "ATAC-seq FSHD iPSC doxorubicin #2": ["GSM4494722_MACS_15491X02_FSHD_doxo_A_peaks.narrowPeak.gz"], "ATAC-seq TP53 KO iPSC control #1": ["GSM4494723_MACS_15491X11_FSHDp53KO_controlA_peaks.narrowPeak.gz"], "ATAC-seq TP53 KO iPSC control #2": ["GSM4494724_MACS_15491X12_FSHDp53KO_controlB_peaks.narrowPeak.gz"], "ATAC-seq TP53 KO iPSC doxorubicin #1": ["GSM4494725_MACS_15491X09_FSHDp53KO_doxoRA_peaks.narrowPeak.gz"], "ATAC-seq TP53 KO iPSC doxorubicin #2": ["GSM4494726_MACS_15491X10_FSHDp53KO_doxoRB_peaks.narrowPeak.gz"], "DND41 cells - H3K27ac": ["GSM5024536_DND41_H3K27ac_peaks.narrowPeak.gz"], "DND41 cells - BCL11B": ["GSM5024537_DND41_BCL11B_peaks.narrowPeak.gz"], "SJTALL005006 cells - H3K27ac": ["GSM5024539_SJTALL005006_H3K27ac_peaks.narrowPeak.gz"], "SJTALL005006 cells - BCL11B, rep1": ["GSM5024540_SJTALL005006_BCL11B_rep1_peaks.narrowPeak.gz"], "SJTALL005006 cells - BCL11B, rep2": ["GSM5024541_SJTALL005006_BCL11B_rep2_peaks.narrowPeak.gz"], "SJALL068666 cells - BCL11B": ["GSM5265324_BCL11B_E15804_peaks.narrowPeak.gz"], "SJALL067672 cells - BCL11B": ["GSM5265325_BCL11B_E22952_peaks.narrowPeak.gz"], "SJALL067671 cells - BCL11B": ["GSM5265326_BCL11B_E14259_peaks.narrowPeak.gz"], "RKO-DMSO-1": ["GSM4733457_RKO_ATAC_DMSO_Rep1_Avg_val.bed.gz"], "RKO-DMSO-2": ["GSM4733458_RKO_ATAC_DMSO_Rep2_Avg_val.bed.gz"], "RKO-DMSO-3": ["GSM4733459_RKO_ATAC_DMSO_Rep3_Avg_val.bed.gz"], "RKO-APH-1": ["GSM4733460_RKO_ATAC_APH_Rep1_Avg_val.bed.gz"], "RKO-APH-2": ["GSM4733461_RKO_ATAC_APH_Rep2_Avg_val.bed.gz"], "RKO-APH-3": ["GSM4733462_RKO_ATAC_APH_Rep3_Avg_val.bed.gz"], "K562 siC DRIPc-seq rep1": ["GSM4676155_siC_DRIPc-seq_W_strand_peaks_rep1.bed.gz", "GSM4676155_siC_DRIPc-seq_C_strand_peaks_rep1.bed.gz"], "K562 siBRG1 DRIPc-seq rep1": ["GSM4676156_siBRG1_DRIPc-seq_W_strand_peaks_rep1.bed.gz", "GSM4676156_siBRG1_DRIPc-seq_C_strand_peaks_rep1.bed.gz"], "K562 siBRG1 DRIPc-seq rep2": ["GSM4676157_siBRG1_DRIPc-seq_W_strand_peaks_rep2.bed.gz", "GSM4676157_siBRG1_DRIPc-seq_C_strand_peaks_rep2.bed.gz"], "ChIP_01: Elite controller 02 mDC H3K27me3": ["GSM5107562_ChIP_01_vs_ChIP_04_broad_peaks.broadPeak.gz"], "ChIP_02: Elite controller 02 mDC H3K27ac": ["GSM5107563_ChIP_02_vs_ChIP_04_broad_peaks.broadPeak.gz"], "ChIP_03: Elite controller 02 mDC H3K4me3": ["GSM5107564_ChIP_03_vs_ChIP_04_broad_peaks.broadPeak.gz"], "ChIP_05: Elite controller 03 mDC H3K27me3": ["GSM5107566_ChIP_05_vs_ChIP_08_broad_peaks.broadPeak.gz"], "ChIP_06: Elite controller 03 mDC H3K27ac": ["GSM5107567_ChIP_06_vs_ChIP_08_broad_peaks.broadPeak.gz"], "ChIP_07: Elite controller 03 mDC H3K4me3": ["GSM5107568_ChIP_07_vs_ChIP_08_broad_peaks.broadPeak.gz"], "ChIP_09: Healthy donor 07 mDC H3K27me3": ["GSM5107570_ChIP_09_vs_ChIP_12_broad_peaks.broadPeak.gz"], "ChIP_10: Healthy donor 07 mDC H3K27ac": ["GSM5107571_ChIP_10_vs_ChIP_12_broad_peaks.broadPeak.gz"], "ChIP_11: Healthy donor 07 mDC H3K4me3": ["GSM5107572_ChIP_11_vs_ChIP_12_broad_peaks.broadPeak.gz"], "ChIP_13: Healthy donor 06 mDC H3K27me3": ["GSM5107574_ChIP_13_vs_ChIP_16_broad_peaks.broadPeak.gz"], "ChIP_14: Healthy donor 06 mDC H3K27ac": ["GSM5107575_ChIP_14_vs_ChIP_16_broad_peaks.broadPeak.gz"], "ChIP_15: Healthy donor 06 mDC H3K4me3": ["GSM5107576_ChIP_15_vs_ChIP_16_broad_peaks.broadPeak.gz"], "ChIP_17: Elite controller 04 mDC H3K27me3": ["GSM5107578_ChIP_17_vs_ChIP_20_broad_peaks.broadPeak.gz"], "ChIP_18: Elite controller 04 mDC H3K27ac": ["GSM5107579_ChIP_18_vs_ChIP_20_broad_peaks.broadPeak.gz"], "ChIP_19: Elite controller 04 mDC H3K4me3": ["GSM5107580_ChIP_19_vs_ChIP_20_broad_peaks.broadPeak.gz"], "ChIP_21: Elite controller 01 mDC H3K27me3": ["GSM5107582_ChIP_21_vs_ChIP_24_broad_peaks.broadPeak.gz"], "ChIP_22: Elite controller 01 mDC H3K27ac": ["GSM5107583_ChIP_22_vs_ChIP_24_broad_peaks.broadPeak.gz"], "ChIP_23: Elite controller 01 mDC H3K4me3": ["GSM5107584_ChIP_23_vs_ChIP_24_broad_peaks.broadPeak.gz"], "ChIP_25: Healthy donor 08 mDC H3K27me3": ["GSM5107586_ChIP_25_vs_ChIP_28_broad_peaks.broadPeak.gz"], "ChIP_26: Healthy donor 08 mDC H3K27ac": ["GSM5107587_ChIP_26_vs_ChIP_28_broad_peaks.broadPeak.gz"], "ChIP_27: Healthy donor 08 mDC H3K4me3": ["GSM5107588_ChIP_27_vs_ChIP_28_broad_peaks.broadPeak.gz"], "ChIP_29: Healthy donor 09 mDC H3K27me3": ["GSM5107590_ChIP_29_vs_ChIP_32_broad_peaks.broadPeak.gz"], "ChIP_30: Healthy donor 09 mDC H3K27ac": ["GSM5107591_ChIP_30_vs_ChIP_32_broad_peaks.broadPeak.gz"], "ChIP_31: Healthy donor 09 mDC H3K4me3": ["GSM5107592_ChIP_31_vs_ChIP_32_broad_peaks.broadPeak.gz"], "TRIP_mapping_DNA_pool1_rep1": ["GSM5273602_TRIP_mapping_P1_1.bed.gz"], "TRIP_mapping_DNA_pool1_rep2": ["GSM5273603_TRIP_mapping_P1_2.bed.gz"], "TRIP_mapping_DNA_pool2_rep1": ["GSM5273604_TRIP_mapping_P2_1.bed.gz"], "TRIP_mapping_DNA_pool2_rep2": ["GSM5273605_TRIP_mapping_P2_2.bed.gz"], "TRIP_mapping_DNA_pool3_rep1": ["GSM5273606_TRIP_mapping_P3_1.bed.gz"], "TRIP_mapping_DNA_pool3_rep2": ["GSM5273607_TRIP_mapping_P3_2.bed.gz"], "TRIP_mapping_DNA_pool4_rep1": ["GSM5273608_TRIP_mapping_P4_1.bed.gz"], "TRIP_mapping_DNA_pool4_rep2": ["GSM5273609_TRIP_mapping_P4_2.bed.gz"], "AIOLOS_WT_NALM6_rep1": ["GSM5259745_NALM6_AIOLOS-WT_1_peaks.narrowPeak.gz"], "AIOLOS_WT_NALM6_rep2": ["GSM5259746_NALM6_AIOLOS-WT_2_peaks.narrowPeak.gz"], "AIOLOS_WT_NALM6_rep3": ["GSM5259747_NALM6_AIOLOS-WT_3_peaks.narrowPeak.gz"], "AIOLOS_WT_NALM6_rep4": ["GSM5259748_NALM6_AIOLOS-WT_4_peaks.narrowPeak.gz"], "AIOLOS_G159R_NALM6_rep1": ["GSM5259749_NALM6_AIOLOS-G159R_1_peaks.narrowPeak.gz"], "AIOLOS_G159R_NALM6_rep2": ["GSM5259750_NALM6_AIOLOS-G159R_2_peaks.narrowPeak.gz"], "AIOLOS_G159R_NALM6_rep3": ["GSM5259751_NALM6_AIOLOS-G159R_3_peaks.narrowPeak.gz"], "AIOLOS_G159R_NALM6_rep4": ["GSM5259752_NALM6_AIOLOS-G159R_4_peaks.narrowPeak.gz"], "HEK293T, H2AZ, CST": ["GSM4503588_MM379_HEK293T_XL_H2AZ_CST_peaks.narrowPeak.gz"], "HEK293T, H2AZ, ABCAM": ["GSM4503589_MM380_HEK293T_XL_H2AZ_ABCAM_peaks.narrowPeak.gz"], "HEK293T, H3.3, EMDMillipore": ["GSM4503590_MM381_HEK293T_XL_H3_3_EMDMillipore_peaks.narrowPeak.gz"], "HEK293T, H4K16ac, CST": ["GSM4503591_MM383_HEK293T_XL_H4K16ac_CST_peaks.narrowPeak.gz"], "HEK293T, H3K79me2, CST": ["GSM4503592_MM384_HEK293T_XL_H3K79me2_CST_peaks.narrowPeak.gz"], "427_BT3_H3K4me3": ["GSM4572159_427_BT3_H3K4me3_peaks.bed.gz"], "790_BT15_H3K4me3": ["GSM4572160_790_BT15_H3K4me3_peaks.bed.gz"], "764_BT16_H3K4me3": ["GSM4572161_764_BT16_H3K4me3_peaks.bed.gz"], "ALL-SIL_H3K4me3": ["GSM4572162_ALL-SIL_H3K4me3_peaks.bed.gz"], "Jurkat_H3K4me3_Spike": ["GSM4572163_Jurkat_H3K4me3_Spike_peaks.bed.gz"], "Loucy_H3K4me3_Spike": ["GSM4572164_Loucy_H3K4me3_Spike_peaks.bed.gz"], "RPMI_H3K4me3": ["GSM4572165_RPMI_H3K4me3_peaks.bed.gz"], "CCRF-CEM_H3K4me3": ["GSM4572166_CCRF-CEM_H3K4me3_peaks.bed.gz"], "ctrl_0_C1_A_ATACseq": ["GSM4614792_LIB180727LH_02_PBS_0_S41_L006.narrowPeak.gz"], "ctrl_0_C1_B_ATACseq": ["GSM4614793_LIB180727LH_03_PBS_0_S50_L006.narrowPeak.gz"], "ctrl_0_C1_C_ATACseq": ["GSM4614794_LIB180727LH_04_PBS_0_S59_L008.narrowPeak.gz"], "ctrl_0_C1_D_ATACseq": ["GSM4614795_LIB180727LH_01_PBS_0_S26_L004.narrowPeak.gz"], "PBS_24_C1_A_ATACseq": ["GSM4614796_LIB180727LH_02_PBS_24_S34_L005.narrowPeak.gz"], "PBS_24_C1_B_ATACseq": ["GSM4614797_LIB180727LH_03_PBS_24_S29_L004.narrowPeak.gz"], "PBS_24_C1_C_ATACseq": ["GSM4614798_LIB180727LH_04_PBS_24_S65_L008.narrowPeak.gz"], "PBS_48_C1_A_ATACseq": ["GSM4614799_LIB180727LH_02_PBS_48_S68_L008.narrowPeak.gz"], "PBS_48_C1_B_ATACseq": ["GSM4614800_LIB180727LH_03_PBS_48_S25_L004.narrowPeak.gz"], "PBS_48_C1_C_ATACseq": ["GSM4614801_LIB180727LH_04_PBS_48_S53_L007.narrowPeak.gz"], "BMP2_24_C1_A_ATACseq": ["GSM4614802_LIB180727LH_02_BMP2_24_S42_L006.narrowPeak.gz"], "BMP2_24_C1_B_ATACseq": ["GSM4614803_LIB180727LH_03_BMP2_24_S52_L007.narrowPeak.gz"], "BMP2_24_C1_C_ATACseq": ["GSM4614804_LIB180727LH_04_BMP2_24_S64_L008.narrowPeak.gz"], "BMP2_48_C1_A_ATACseq": ["GSM4614805_LIB180727LH_02_BMP2_48_S47_L006.narrowPeak.gz"], "BMP2_48_C1_B_ATACseq": ["GSM4614806_LIB180727LH_03_BMP2_48_S33_L005.narrowPeak.gz"], "BMP2_48_C1_C_ATACseq": ["GSM4614807_LIB180727LH_04_BMP2_48_S67_L008.narrowPeak.gz"], "IFNG_24_C1_A_ATACseq": ["GSM4614808_LIB180727LH_02_IFNg_24_S57_L007.narrowPeak.gz"], "IFNG_24_C1_B_ATACseq": ["GSM4614809_LIB180727LH_03_IFNg_24_S32_L005.narrowPeak.gz"], "IFNG_24_C1_C_ATACseq": ["GSM4614810_LIB180727LH_04_IFNg_24_S45_L006.narrowPeak.gz"], "IFNG_48_C1_A_ATACseq": ["GSM4614811_LIB180727LH_02_IFNg_48_S37_L005.narrowPeak.gz"], "IFNG_48_C1_B_ATACseq": ["GSM4614812_LIB180727LH_03_IFNg_48_S23_L004.narrowPeak.gz"], "IFNG_48_C1_C_ATACseq": ["GSM4614813_LIB180727LH_04_IFNg_48_S66_L008.narrowPeak.gz"], "TGFB_24_C1_A_ATACseq": ["GSM4614814_LIB180727LH_02_TGFb_24_S48_L006.narrowPeak.gz"], "TGFB_24_C1_B_ATACseq": ["GSM4614815_LIB180727LH_03_TGFb_24_S36_L005.narrowPeak.gz"], "TGFB_24_C1_C_ATACseq": ["GSM4614816_LIB180727LH_04_TGFb_24_S31_L005.narrowPeak.gz"], "TGFB_48_C1_A_ATACseq": ["GSM4614817_LIB180727LH_02_TGFb_48_S43_L006.narrowPeak.gz"], "TGFB_48_C1_B_ATACseq": ["GSM4614818_LIB180727LH_03_TGFb_48_S60_L007.narrowPeak.gz"], "TGFB_48_C1_C_ATACseq": ["GSM4614819_LIB180727LH_04_TGFb_48_S54_L007.narrowPeak.gz"], "HGF_24_C1_A_ATACseq": ["GSM4614820_LIB180727LH_02_HGF_24_S24_L004.narrowPeak.gz"], "HGF_24_C1_B_ATACseq": ["GSM4614821_LIB180727LH_03_HGF_24_S39_L005.narrowPeak.gz"], "HGF_24_C1_C_ATACseq": ["GSM4614822_LIB180727LH_04_HGF_24_S62_L008.narrowPeak.gz"], "HGF_48_C1_A_ATACseq": ["GSM4614823_LIB180727LH_02_HGF_48_S44_L006.narrowPeak.gz"], "HGF_48_C1_B_ATACseq": ["GSM4614824_LIB180727LH_03_HGF_48_S30_L004.narrowPeak.gz"], "HGF_48_C1_C_ATACseq": ["GSM4614825_LIB180727LH_04_HGF_48_S56_L007.narrowPeak.gz"], "OSM_24_C1_A_ATACseq": ["GSM4614826_LIB180727LH_02_OSM_24_S22_L004.narrowPeak.gz"], "OSM_24_C1_B_ATACseq": ["GSM4614827_LIB180727LH_03_OSM_24_S51_L007.narrowPeak.gz"], "OSM_24_C1_C_ATACseq": ["GSM4614828_LIB180727LH_04_OSM_24_S40_L005.narrowPeak.gz"], "OSM_48_C1_A_ATACseq": ["GSM4614829_LIB180727LH_02_OSM_48_S63_L008.narrowPeak.gz"], "OSM_48_C1_B_ATACseq": ["GSM4614830_LIB180727LH_03_OSM_48_S46_L006.narrowPeak.gz"], "OSM_48_C1_C_ATACseq": ["GSM4614831_LIB180727LH_04_OSM_48_S27_L004.narrowPeak.gz"], "EGF_24_C1_A_ATACseq": ["GSM4614832_LIB180727LH_02_EGF_24_S58_L007.narrowPeak.gz"], 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["GSM4948687_no_TPL_1hr_no_dm6_rep1.SLX-18053_peaks.narrowPeak.gz"], "no_TPL_1hr_rep1.bio2": ["GSM4948688_no_TPL_1hr_no_dm6_rep1.SLX-18059_peaks.narrowPeak.gz"], "no_TPL_1hr_rep2.bio1": ["GSM4948689_no_TPL_1hr_no_dm6_rep2.SLX-18053_peaks.narrowPeak.gz"], "no_TPL_1hr_rep2.bio2": ["GSM4948690_no_TPL_1hr_no_dm6_rep2.SLX-18059_peaks.narrowPeak.gz"], "no_TPL_1hr_rep3.bio1": ["GSM4948691_no_TPL_1hr_no_dm6_rep3.SLX-18053_peaks.narrowPeak.gz"], "no_TPL_1hr_rep3.bio2": ["GSM4948692_no_TPL_1hr_no_dm6_rep3.SLX-18059_peaks.narrowPeak.gz"], "no_DRB_1hr_rep1.bio2": ["GSM4948693_noDRB_biorep1_tech1.SLX-16767_peaks.narrowPeak.gz"], "no_DRB_1hr_rep2.bio2": ["GSM4948694_noDRB_biorep1_tech2.SLX-16767_peaks.narrowPeak.gz"], "no_DRB_1hr_rep3.bio2": ["GSM4948695_noDRB_biorep1_tech3.SLX-16767_peaks.narrowPeak.gz"], "no_DRB_1hr_rep1.bio3": ["GSM4948696_noDRB_biorep3_tech1.SLX-16409_peaks.narrowPeak.gz"], "no_DRB_1hr_rep2.bio3": ["GSM4948697_noDRB_biorep3_tech2.SLX-16409_peaks.narrowPeak.gz"], "no_DRB_1hr_rep3.bio3": ["GSM4948698_noDRB_biorep3_tech3.SLX-16409_peaks.narrowPeak.gz"], "no_DRB_1hr_rep1.bio4": ["GSM4948699_noDRB_biorep5_tech1.SLX-18055_peaks.narrowPeak.gz"], "no_DRB_1hr_rep2.bio4": ["GSM4948700_noDRB_biorep5_tech2.SLX-18055_peaks.narrowPeak.gz"], "no_DRB_1hr_rep3.bio4": ["GSM4948701_noDRB_biorep5_tech3.SLX-18055_peaks.narrowPeak.gz"], "no_DRB_1hr_rep1.bio1": ["GSM4948702_noDRB_X_biorep1_tech1.SLX-16406_peaks.narrowPeak.gz"], "no_DRB_1hr_rep2.bio1": ["GSM4948703_noDRB_X_biorep1_tech2.SLX-16406_peaks.narrowPeak.gz"], "no_DRB_1hr_rep3.bio1": ["GSM4948704_noDRB_X_biorep1_tech3.SLX-16406_peaks.narrowPeak.gz"], "normoxia_1hr_G4_ChIP_rep1.bio1": ["GSM4948705_normoxia_1hr_biorep1_ChIP1.bg4_normo_hypo.narrowPeak.gz"], "normoxia_1hr_G4_ChIP_rep2.bio1": ["GSM4948706_normoxia_1hr_biorep1_ChIP2.bg4_normo_hypo.narrowPeak.gz"], "normoxia_1hr_G4_ChIP_rep3.bio1": ["GSM4948707_normoxia_1hr_biorep1_ChIP3.bg4_normo_hypo.narrowPeak.gz"], "normoxia_1hr_G4_ChIP_rep1.bio2": ["GSM4948708_normoxia_1hr_biorep2_ChIP1.bg4_normo_hypo.narrowPeak.gz"], "normoxia_1hr_G4_ChIP_rep2.bio2": ["GSM4948709_normoxia_1hr_biorep2_ChIP2.bg4_normo_hypo.narrowPeak.gz"], "normoxia_1hr_G4_ChIP_rep3.bio2": ["GSM4948710_normoxia_1hr_biorep2_ChIP3.bg4_normo_hypo.narrowPeak.gz"], "normoxia_1hr_G4_ChIP_rep1.bio3": ["GSM4948711_normoxia_1hr_biorep3_ChIP1.bg4_normo_hypo.narrowPeak.gz"], "normoxia_1hr_G4_ChIP_rep2.bio3": ["GSM4948712_normoxia_1hr_biorep3_ChIP2.bg4_normo_hypo.narrowPeak.gz"], "normoxia_1hr_G4_ChIP_rep3.bio3": ["GSM4948713_normoxia_1hr_biorep3_ChIP3.bg4_normo_hypo.narrowPeak.gz"], "normoxia_1hr_Pol2_ChIP_biorep1": ["GSM4948714_normoxia_1hr_Pol2_ChIP_biorep1_peaks.narrowPeak.gz"], "normoxia_1hr_Pol2_ChIP_biorep2": ["GSM4948715_normoxia_1hr_Pol2_ChIP_biorep2_peaks.narrowPeak.gz"], "normoxia_1hr_Pol2_ChIP_biorep3": ["GSM4948716_normoxia_1hr_Pol2_ChIP_biorep3_peaks.narrowPeak.gz"], "normoxia_1hr_Pol2_ChIP_biorep4": ["GSM4948717_normoxia_1hr_Pol2_ChIP_biorep4_peaks.narrowPeak.gz"], "normoxia_1hr_Pol2_ChIP_biorep5": ["GSM4948718_normoxia_1hr_Pol2_ChIP_biorep5_peaks.narrowPeak.gz"], "normoxia_1hr_whole_cell_ATACseq_biorep1": ["GSM4948719_normoxia_1hr_wholeK562_fragment_1hr_biorep1_ATACseq5.SLX-18056_SLX-18895.merged.sorted.macs2_peaks_peaks.narrowPeak.gz"], "normoxia_1hr_whole_cell_ATACseq_biorep2": ["GSM4948720_normoxia_1hr_wholeK562_fragment_1hr_biorep2_ATACseq9.SLX-18056_SLX-18895.merged.sorted.macs2_peaks_peaks.narrowPeak.gz"], "normoxia_1hr_whole_cell_ATACseq_biorep3": ["GSM4948721_normoxia_1hr_wholeK562_fragment_1hr_biorep3_ATACseq13.SLX-18056_SLX-18895.merged.sorted.macs2_peaks_peaks.narrowPeak.gz"], "hypoxia_1hr_U2OS_biorep1_ChIP1": ["GSM5222751_hypoxia_1hr_U2OS_biorep1_ChIP_biorep1_peaks.narrowPeak.gz"], "hypoxia_1hr_U2OS_biorep1_ChIP2": ["GSM5222752_hypoxia_1hr_U2OS_biorep1_ChIP_biorep2_peaks.narrowPeak.gz"], "hypoxia_1hr_U2OS_biorep1_ChIP3": ["GSM5222753_hypoxia_1hr_U2OS_biorep1_ChIP_biorep3_peaks.narrowPeak.gz"], "hypoxia_1hr_U2OS_biorep3_ChIP1": ["GSM5222755_hypoxia_1hr_U2OS_biorep3_ChIP_biorep1_peaks.narrowPeak.gz"], "hypoxia_1hr_U2OS_biorep3_ChIP2": ["GSM5222756_hypoxia_1hr_U2OS_biorep3_ChIP_biorep2_peaks.narrowPeak.gz"], "hypoxia_1hr_U2OS_biorep3_ChIP3": ["GSM5222757_hypoxia_1hr_U2OS_biorep3_ChIP_biorep3_peaks.narrowPeak.gz"], "hypoxia_1hr_U2OS_biorep4_ChIP1": ["GSM5222759_hypoxia_1hr_U2OS_biorep4_ChIP_biorep1_peaks.narrowPeak.gz"], "hypoxia_1hr_U2OS_biorep4_ChIP2": ["GSM5222760_hypoxia_1hr_U2OS_biorep4_ChIP_biorep2_peaks.narrowPeak.gz"], "hypoxia_1hr_U2OS_biorep4_ChIP3": ["GSM5222761_hypoxia_1hr_U2OS_biorep4_ChIP_biorep3_peaks.narrowPeak.gz"], "normoxia_1hr_U2OS_biorep1_ChIP1": ["GSM5222763_normoxia_1hr_U2OS_biorep1_ChIP_biorep1_peaks.narrowPeak.gz"], "normoxia_1hr_U2OS_biorep1_ChIP2": ["GSM5222764_normoxia_1hr_U2OS_biorep1_ChIP_biorep2_peaks.narrowPeak.gz"], "normoxia_1hr_U2OS_biorep1_ChIP3": ["GSM5222765_normoxia_1hr_U2OS_biorep1_ChIP_biorep3_peaks.narrowPeak.gz"], "normoxia_1hr_U2OS_biorep3_ChIP1": ["GSM5222767_normoxia_1hr_U2OS_biorep3_ChIP_biorep1_peaks.narrowPeak.gz"], "normoxia_1hr_U2OS_biorep3_ChIP2": ["GSM5222768_normoxia_1hr_U2OS_biorep3_ChIP_biorep2_peaks.narrowPeak.gz"], "normoxia_1hr_U2OS_biorep3_ChIP3": ["GSM5222769_normoxia_1hr_U2OS_biorep3_ChIP_biorep3_peaks.narrowPeak.gz"], "normoxia_1hr_U2OS_biorep4_ChIP1": ["GSM5222771_normoxia_1hr_U2OS_biorep4_ChIP_biorep1_peaks.narrowPeak.gz"], "normoxia_1hr_U2OS_biorep4_ChIP2": ["GSM5222772_normoxia_1hr_U2OS_biorep4_ChIP_biorep2_peaks.narrowPeak.gz"], "normoxia_1hr_U2OS_biorep4_ChIP3": ["GSM5222773_normoxia_1hr_U2OS_biorep4_ChIP_biorep3_peaks.narrowPeak.gz"], "Healthy Control 1 - H3K4me3": ["GSM4629476_H3K4me3_C1_HC_1.bam_peaks.broadPeak.gz"], "Healthy Control 2 - H3K4me3": ["GSM4629477_H3K4me3_C1_HC_2.bam_peaks.broadPeak.gz"], "Healthy Control 3 - H3K4me3": ["GSM4629478_H3K4me3_C1_HC_3.bam_peaks.broadPeak.gz"], "Healthy Control 4 - H3K4me3": ["GSM4629479_H3K4me3_C1_HC_4.bam_peaks.broadPeak.gz"], "Healthy Control 5 - H3K4me3": ["GSM4629480_H3K4me3_C1_HC_5.bam_peaks.broadPeak.gz"], "Rheumatoid Arthritis 1 - H3K4me3": ["GSM4629481_H3K4me3_C1_RA_1.bam_peaks.broadPeak.gz"], "Rheumatoid Arthritis 2 - H3K4me3": ["GSM4629482_H3K4me3_C1_RA_2.bam_peaks.broadPeak.gz"], "Rheumatoid Arthritis 3 - H3K4me3": ["GSM4629483_H3K4me3_C1_RA_3.bam_peaks.broadPeak.gz"], "Rheumatoid Arthritis 4 - H3K4me3": ["GSM4629484_H3K4me3_C1_RA_4.bam_peaks.broadPeak.gz"], "Rheumatoid Arthritis 5 - H3K4me3": ["GSM4629485_H3K4me3_C1_RA_5.bam_peaks.broadPeak.gz"], "Rheumatoid Arthritis 6 - H3K4me3": ["GSM4629486_H3K4me3_C1_RA_6.bam_peaks.broadPeak.gz"], "Rheumatoid Arthritis 7 - H3K4me3": ["GSM4629487_H3K4me3_C1_RA_7.bam_peaks.broadPeak.gz"], "Rheumatoid Arthritis 8 - H3K4me3": ["GSM4629488_H3K4me3_C1_RA_8.bam_peaks.broadPeak.gz"], "Rheumatoid Arthritis 9 - H3K4me3": ["GSM4629489_H3K4me3_C1_RA_9.bam_peaks.broadPeak.gz"], "Rheumatoid Arthritis 10 - H3K4me3": ["GSM4629490_H3K4me3_C1_RA_10.bam_peaks.broadPeak.gz"], "Rheumatoid Arthritis 11 - H3K4me3": ["GSM4629491_H3K4me3_C1_RA_11.bam_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P1C8 G34R G34R KO rep1": ["GSM4974193_GBM002-P1C8_G34R_1_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P1C8 G34R G34R KO rep2": ["GSM4974194_GBM002-P1C8_G34R_2_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P1C8 H3K27me3 G34R KO rep1": ["GSM4974195_GBM002-P1C8_H3K27me3_1_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P1C8 H3K27me3 G34R KO rep2": ["GSM4974196_GBM002-P1C8_H3K27me3_2_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P1C8 H3K36me3 G34R KO rep1": ["GSM4974197_GBM002-P1C8_H3K36me3_1_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P1C8 H3K36me3 G34R KO rep2": ["GSM4974198_GBM002-P1C8_H3K36me3_2_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P1C8 H3K4me3 G34R KO rep1": ["GSM4974199_GBM002-P1C8_H3K4me3_1_peaks.narrowPeak.gz"], "Paediatric glioblastoma cell GBM002-P1C8 H3K4me3 G34R KO rep2": ["GSM4974200_GBM002-P1C8_H3K4me3_2_peaks.narrowPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 H3K27me3 G34R rep1": ["GSM4974203_GBM002-P2D3-PBr-G34R_H3K27me3_1_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 H3K27me3 G34R rep2": ["GSM4974204_GBM002-P2D3-PBr-G34R_H3K27me3_2_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 H3K36me3 G34R rep1": ["GSM4974205_GBM002-P2D3-PBr-G34R_H3K36me3_1_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 H3K36me3 G34R rep2": ["GSM4974206_GBM002-P2D3-PBr-G34R_H3K36me3_2_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 H3K4me3 G34R rep1": ["GSM4974207_GBM002-P2D3-PBr-G34R_H3K4me3_1_peaks.narrowPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 H3K4me3 G34R rep2": ["GSM4974208_GBM002-P2D3-PBr-G34R_H3K4me3_2_peaks.narrowPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 v5-tag G34R rep1": ["GSM4974211_GBM002-P2D3-PBr-G34R_v5-tag_1_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 v5-tag G34R rep2": ["GSM4974212_GBM002-P2D3-PBr-G34R_v5-tag_2_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 H3K27me3 G34R KO rep1": ["GSM4974213_GBM002-P2D3-PBr-WT_H3K27me3_1_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 H3K27me3 G34R KO rep2": ["GSM4974214_GBM002-P2D3-PBr-WT_H3K27me3_2_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 H3K36me3 G34R KO rep1": ["GSM4974215_GBM002-P2D3-PBr-WT_H3K36me3_1_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 H3K36me3 G34R KO rep2": ["GSM4974216_GBM002-P2D3-PBr-WT_H3K36me3_2_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 H3K4me3 G34R KO rep1": ["GSM4974217_GBM002-P2D3-PBr-WT_H3K4me3_1_peaks.narrowPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 H3K4me3 G34R KO rep2": ["GSM4974218_GBM002-P2D3-PBr-WT_H3K4me3_2_peaks.narrowPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 v5-tag G34R KO rep1": ["GSM4974221_GBM002-P2D3-PBr-WT_v5-tag_1_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-P2D3 v5-tag G34R KO rep2": ["GSM4974222_GBM002-P2D3-PBr-WT_v5-tag_2_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-Parental G34R G34R rep1": ["GSM4974223_GBM002-Parental_G34R_1_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-Parental G34R G34R rep2": ["GSM4974224_GBM002-Parental_G34R_2_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-Parental H3K27me3 G34R rep1": ["GSM4974225_GBM002-Parental_H3K27me3_1_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-Parental H3K27me3 G34R rep2": ["GSM4974226_GBM002-Parental_H3K27me3_2_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-Parental H3K36me3 G34R rep1": ["GSM4974227_GBM002-Parental_H3K36me3_1_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-Parental H3K36me3 G34R rep2": ["GSM4974228_GBM002-Parental_H3K36me3_2_peaks.broadPeak.gz"], "Paediatric glioblastoma cell GBM002-Parental H3K4me3 G34R rep1": ["GSM4974229_GBM002-Parental_H3K4me3_1_peaks.narrowPeak.gz"], "Paediatric glioblastoma cell GBM002-Parental H3K4me3 G34R rep2": ["GSM4974230_GBM002-Parental_H3K4me3_2_peaks.narrowPeak.gz"], "1927_ACC_AP": ["GSM4663519_ACC_1927_AN_peaks.narrowPeak.gz"], "1927_ACC_AN": ["GSM4663520_ACC_1927_AP_peaks.narrowPeak.gz"], "1936_ACC_AP": ["GSM4663521_ACC_1936_AP_peaks.narrowPeak.gz"], "Control1 for HSE-K27AC": ["GSM5075784_HSE-K27AC-Ctrl-1.FCHK5LJBBXY_L8_R1_IATCACG.PE_macs2_peaks.bed.gz"], "Control2 for HSE-K27AC": ["GSM5075786_HSE-K27AC-Ctrl-2.FCHK5LJBBXY_L8_R1_ITTAGGC.PE_macs2_peaks.bed.gz"], "TNF1": ["GSM5075788_HSE-K27AC-TNF-1.FCHK5LJBBXY_L8_R1_IACAGTG.PE_macs2_peaks.bed.gz"], "TNF2": ["GSM5075790_HSE-K27AC-TNF-2.FCHK5LJBBXY_L8_R1_ICAGATC.PE_macs2_peaks.bed.gz"], "NFKB TNF": ["GSM5075793_HSE-NF-kB-TNF-2.FCHK5LJBBXY_L8_R1_IATGTCA.PE_macs2_peaks.bed.gz"], "HSE-K27AC-Ctrl-1": ["GSM5060168_HSE-K27AC-Ctrl-1.FCHK5LJBBXY_L8_R1_IATCACG.PE_macs2_peaks.bed.gz"], "HSE-K27AC-Ctrl-2": ["GSM5060170_HSE-K27AC-Ctrl-2.FCHK5LJBBXY_L8_R1_ITTAGGC.PE_macs2_peaks.bed.gz"], "HSE-K27AC-TNF-1": ["GSM5060172_HSE-K27AC-TNF-1.FCHK5LJBBXY_L8_R1_IACAGTG.PE_macs2_peaks.bed.gz"], "HSE-K27AC-TNF-2": ["GSM5060174_HSE-K27AC-TNF-2.FCHK5LJBBXY_L8_R1_ICAGATC.PE_macs2_peaks.bed.gz"], "HSE-NF-kB-TNF-2": ["GSM5060177_HSE-NF-kB-TNF-2.FCHK5LJBBXY_L8_R1_IATGTCA.PE_macs2_peaks.bed.gz"], "DMSO1": ["GSM4974437_DMSO1_bwa_peaks.narrowPeak.gz"], "DMSO2": ["GSM4974438_DMSO2_bwa_peaks.narrowPeak.gz"], "AZD": ["GSM4974441_AZD_bwa_peaks.narrowPeak.gz"], "ZM": ["GSM4974443_ZM_bwa_RC_peaks.narrowPeak.gz"], "Cytotrophoblast_control_H3K27ac-1": ["GSM5104910_Cytotrophoblast_control_H3K27ac-1.broadPeak.gz"], "Cytotrophoblast_control_H3K27ac-2": ["GSM5104911_Cytotrophoblast_control_H3K27ac-2.broadPeak.gz"], "Cytotrophoblast_vitD_H3K27ac-1": ["GSM5104912_Cytotrophoblast_vitD_H3K27ac-1.broadPeak.gz"], "Cytotrophoblast_vitD_H3K27ac-2": ["GSM5104913_Cytotrophoblast_vitD_H3K27ac-2.broadPeak.gz"], "Cytotrophoblast_control_H3K4me3-1": ["GSM5104914_Cytotrophoblast_control_H3K4me3-1.broadPeak.gz"], "Cytotrophoblast_control_H3K4me3-2": ["GSM5104915_Cytotrophoblast_control_H3K4me3-2.broadPeak.gz"], "Cytotrophoblast_vitD_H3K4me3-1": ["GSM5104916_Cytotrophoblast_vitD_H3K4me3-1.broadPeak.gz"], "Cytotrophoblast_vitD_H3K4me3-2": ["GSM5104917_Cytotrophoblast_vitD_H3K4me3-2.broadPeak.gz"], "ChIP-seq LAPC4 KLF4 EtOH rep1": ["GSM4891299_KLF4_V_rep1_peaks.narrowPeak.bed.gz"], "ChIP-seq LAPC4 KLF4 EtOH rep2": ["GSM4891300_KLF4_V_rep2_peaks.narrowPeak.bed.gz"], "ChIP-seq LAPC4 KLF4 DHT rep1": ["GSM4891301_KLF4_DHT_rep1_peaks.narrowPeak.bed.gz"], "ChIP-seq LAPC4 KLF4 DHT rep2": ["GSM4891302_KLF4_DHT_rep2_peaks.narrowPeak.bed.gz"], "ChIP-seq LAPC4 AR EtOH rep1": ["GSM4891303_AR_V_rep1_peaks.narrowPeak.bed.gz"], "ChIP-seq LAPC4 AR EtOH rep2": ["GSM4891304_AR_V_rep2_peaks.narrowPeak.bed.gz"], "ChIP-seq LAPC4 AR DHT rep1": ["GSM4891305_AR_DHT_rep1_peaks.narrowPeak.bed.gz"], "ChIP-seq LAPC4 AR DHT rep2": ["GSM4891306_AR_DHT_rep2_peaks.narrowPeak.bed.gz"], "non-activated CD8 T cell -rep1": ["GSM5066031_peak_nonAct_01.narrowPeak.gz"], "non-activated CD8 T cell -rep2": ["GSM5066032_peak_nonAct_02.narrowPeak.gz"], "non-activated CD8 T cell -rep3": ["GSM5066033_peak_nonAct_03.narrowPeak.gz"], "mock-treated CD8 T cell -rep1": ["GSM5066034_peak_Act_01.narrowPeak.gz"], "mock-treated CD8 T cell -rep2": ["GSM5066035_peak_Act_02.narrowPeak.gz"], "mock-treated CD8 T cell -rep3": ["GSM5066036_peak_Act_03.narrowPeak.gz"], "SAM-treated CD8 T cell -rep1": ["GSM5066037_peak_SAM_01.narrowPeak.gz"], "SAM-treated CD8 T cell -rep2": ["GSM5066038_peak_SAM_02.narrowPeak.gz"], "SAM-treated CD8 T cell -rep3": ["GSM5066039_peak_SAM_03.narrowPeak.gz"], "MTA-treated CD8 T cell -rep1": ["GSM5066040_peak_MTA_01.narrowPeak.gz"], "MTA-treated CD8 T cell -rep2": ["GSM5066041_peak_MTA_02.narrowPeak.gz"], "MTA-treated CD8 T cell -rep3": ["GSM5066042_peak_MTA_03.narrowPeak.gz"], "Cal27_H3K27ac": ["GSM4508624_Cal27.H3K27ac.narrowPeak.gz"], "Cal27_KO1_H3K27ac": ["GSM4508630_Cal27_KO1.H3K27ac.narrowPeak.gz"], "Cal27_KO17_H3K27ac": ["GSM4508636_Cal27_KO17.H3K27ac.narrowPeak.gz"], "Det562_H3K27ac": ["GSM4508642_Det562.H3K27ac.narrowPeak.gz"], "Det562_KO1_H3K27ac": ["GSM4508648_Det562_KO1.H3K27ac.narrowPeak.gz"], "Det562_KO2_H3K27ac": ["GSM4508654_Det562_KO2.H3K27ac.narrowPeak.gz"], "Det562_KO4_H3K27ac": ["GSM4508660_Det562_KO4.H3K27ac.narrowPeak.gz"], "MDA-MB-231 GATA3 wildtype cells - GATA3_rep1": ["GSM4929582_WT.rep1_5foldpeaks.bed.gz"], "MDA-MB-231 GATA3 wildtype cells - GATA3_rep2": ["GSM4929583_WT.rep2_5foldpeaks.bed.gz"], "MDA-MB-231 GATA3 A->M cells - GATA3_rep1": ["GSM4929584_MUT_AM.rep1_5foldpeaks.bed.gz"], "MDA-MB-231 GATA3 A->M cells - GATA3_rep2": ["GSM4929585_MUT_AM.rep2_5foldpeaks.bed.gz"], "MDA-MB-231 GATA3 G->E cells - GATA3_rep1": ["GSM4929586_MUT_GE.rep1_5foldpeaks.bed.gz"], "MDA-MB-231 GATA3 G->E cells - GATA3_rep2": ["GSM4929587_MUT_GE.rep2_5foldpeaks.bed.gz"], "MDA-MB-231 GATA3-flag cells - GATA3_rep1": ["GSM4929588_WT_FLAG.rep1_5foldpeaks.bed.gz"], "MDA-MB-231 GATA3-flag cells - GATA3_rep2": ["GSM4929589_WT_FLAG.rep2_5foldpeaks.bed.gz"], "MDA-MB-231 GATA3-flag A->M cells - GATA3_rep1": ["GSM4929590_MUT_AM_FLAG.rep1_5foldpeaks.bed.gz"], "MDA-MB-231 GATA3-flag A->M cells - GATA3_rep2": ["GSM4929591_MUT_AM_FLAG.rep2_5foldpeaks.bed.gz"], "MDA-MB-231 GATA3-flag G->E cells - GATA3_rep1": ["GSM4929592_MUT_GE_FLAG.rep1_5foldpeaks.bed.gz"], "MDA-MB-231 GATA3-flag G->E cells - GATA3_rep2": ["GSM4929593_MUT_GE_FLAG.rep2_5foldpeaks.bed.gz"], "iMGL_3411_bulkATACseq": ["GSM4977137_PPMI_iMGL_3411.narrowPeak.gz"], "iMGL_3446_bulkATACseq": ["GSM4977138_PPMI_iMGL_3446.narrowPeak.gz"], "iMGL_3453_bulkATACseq": ["GSM4977139_PPMI_iMGL_3453.narrowPeak.gz"], "iMGL_4101_bulkATACseq": ["GSM4977140_PPMI_iMGL_4101.narrowPeak.gz"], "iFbN_33i_rep1_bulkATACseq": ["GSM4977141_33i_FBn_50katac1.narrowPeak.gz"], "iFbN_33i_rep2_bulkATACseq": ["GSM4977142_33i_FBn_50katac2.narrowPeak.gz"], "iFbN_33i_rep3_bulkATACseq": ["GSM4977143_33i_FBn_50katac3.narrowPeak.gz"], "HL60_Rep1_bATACseq": ["GSM5012242_HL60_Rep1_bATACseq_HomerPeaks.bed.gz"], "HL60_Rep2_bATACseq": ["GSM5012243_HL60_Rep2_bATACseq_HomerPeaks.bed.gz"], "Mac_0hrs_Rep1_bATACseq": ["GSM5012244_Mac_0hrs_Rep1_bATACseq_HomerPeaks.bed.gz"], "Mac_0hrs_Rep2_bATACseq": ["GSM5012245_Mac_0hrs_Rep2_bATACseq_HomerPeaks.bed.gz"], "M1_3hrs_Rep1_bATACseq": ["GSM5012246_M1_3hrs_Rep1_bATACseq_HomerPeaks.bed.gz"], "M1_3hrs_Rep2_bATACseq": ["GSM5012247_M1_3hrs_Rep2_bATACseq_HomerPeaks.bed.gz"], "M1_6hrs_Rep1_bATACseq": ["GSM5012248_M1_6hrs_Rep1_bATACseq_HomerPeaks.bed.gz"], "M1_6hrs_Rep2_bATACseq": ["GSM5012249_M1_6hrs_Rep2_bATACseq_HomerPeaks.bed.gz"], "M1_12hrs_Rep1_bATACseq": ["GSM5012250_M1_12hrs_Rep1_bATACseq_HomerPeaks.bed.gz"], "M1_12hrs_Rep2_bATACseq": ["GSM5012251_M1_12hrs_Rep2_bATACseq_HomerPeaks.bed.gz"], "M1_24hrs_Rep1_bATACseq": ["GSM5012252_M1_24hrs_Rep1_bATACseq_HomerPeaks.bed.gz"], "M1_24hrs_Rep2_bATACseq": ["GSM5012253_M1_24hrs_Rep2_bATACseq_HomerPeaks.bed.gz"], "M2_3hrs_Rep1_bATACseq": ["GSM5012254_M2_3hrs_Rep1_bATACseq_HomerPeaks.bed.gz"], "M2_3hrs_Rep2_bATACseq": ["GSM5012255_M2_3hrs_Rep2_bATACseq_HomerPeaks.bed.gz"], "M2_6hrs_Rep1_bATACseq": ["GSM5012256_M2_6hrs_Rep1_bATACseq_HomerPeaks.bed.gz"], "M2_6hrs_Rep2_bATACseq": ["GSM5012257_M2_6hrs_Rep2_bATACseq_HomerPeaks.bed.gz"], "M2_12hrs_Rep1_bATACseq": ["GSM5012258_M2_12hrs_Rep1_bATACseq_HomerPeaks.bed.gz"], "M2_12hrs_Rep2_bATACseq": ["GSM5012259_M2_12hrs_Rep2_bATACseq_HomerPeaks.bed.gz"], "M2_24hrs_Rep1_bATACseq": ["GSM5012260_M2_24hrs_Rep1_bATACseq_HomerPeaks.bed.gz"], "M2_24hrs_Rep2_bATACseq": ["GSM5012261_M2_24hrs_Rep2_bATACseq_HomerPeaks.bed.gz"], "M2_Neg_Ctrl_KD_Rep1_bATACseq": ["GSM5012274_M2_Neg_Ctrl_KD_Rep1_bATACseq_HomerPeaks.bed.gz"], "M2_Neg_Ctrl_KD_Rep2_bATACseq": ["GSM5012275_M2_Neg_Ctrl_KD_Rep2_bATACseq_HomerPeaks.bed.gz"], "M2_Pos_Ctrl_KD_Rep1_bATACseq": ["GSM5012276_M2_Pos_Ctrl_KD_Rep1_bATACseq_HomerPeaks.bed.gz"], "M2_Pos_Ctrl_KD_Rep2_bATACseq": ["GSM5012277_M2_Pos_Ctrl_KD_Rep2_bATACseq_HomerPeaks.bed.gz"], "M2_IRF1_KD_Rep1_bATACseq": ["GSM5012278_M2_IRF1_KD_Rep1_bATACseq_HomerPeaks.bed.gz"], "M2_IRF1_KD_Rep2_bATACseq": ["GSM5012279_M2_IRF1_KD_Rep2_bATACseq_HomerPeaks.bed.gz"], "M2_IRF7_KD_Rep1_bATACseq": ["GSM5012280_M2_IRF7_KD_Rep1_bATACseq_HomerPeaks.bed.gz"], "M2_IRF7_KD_Rep2_bATACseq": ["GSM5012281_M2_IRF7_KD_Rep2_bATACseq_HomerPeaks.bed.gz"], "M2_IRF9_KD_Rep1_bATACseq": ["GSM5012282_M2_IRF9_KD_Rep1_bATACseq_HomerPeaks.bed.gz"], "M2_IRF9_KD_Rep2_bATACseq": ["GSM5012283_M2_IRF9_KD_Rep2_bATACseq_HomerPeaks.bed.gz"], "M2_ID2_KD_Rep1_bATACseq": ["GSM5012284_M2_ID2_KD_Rep1_bATACseq_HomerPeaks.bed.gz"], "M2_ID2_KD_Rep2_bATACseq": ["GSM5012285_M2_ID2_KD_Rep2_bATACseq_HomerPeaks.bed.gz"], "SKOV3_wt_untreated_H3ack9": ["GSM5019867_B_peaks_UNTREATED.bed.gz"], "SKOV3_wt_vorinostat_H3ack9": ["GSM5019869_D_peaks_VORINOSTAT2.bed.gz", "GSM5019869_D_peaks_VORINOSTAT1.bed.gz"], "SKOV3_wt_romidepsin_H3ack9": ["GSM5019871_F_peaks_ROMIDEPSIN2.bed.gz", "GSM5019871_F_peaks_ROMIDEPSIN1.bed.gz"], "EZH2 Day1 TMZ": ["GSM5008032_EZH2TMZ_24_peaks.narrowPeak.gz", "GSM5008032_EZH2TMZ_24_summits.bed.gz"], "EZH2 Day 4 TMZ": ["GSM5008033_EZH2_TMZD4_summits.bed.gz", "GSM5008033_EZH2_TMZD4_peaks.narrowPeak.gz"], "H3K27me3 Day 1 TMZ": ["GSM5008034_H3K27me3TMZ_24_peaks.narrowPeak.gz", "GSM5008034_H3K27me3TMZ_24_summits.bed.gz"], "H3K27me3 Day 4 TMZ": ["GSM5008035_H3K27me3TMZ_D4_peaks.narrowPeak.gz", "GSM5008035_H3K27me3TMZ_D4_summits.bed.gz"], "H3K27ac Day 4 DMSO": ["GSM5008036_K27acDMSO_D4_summits.bed.gz", "GSM5008036_K27acDMSO_D4_peaks.narrowPeak.gz"], "H3K27ac Day 4 TMZ": ["GSM5008037_K27acTMZ_D4_summits.bed.gz", "GSM5008037_K27acTMZ_D4_peaks.narrowPeak.gz"], "ATACseq_D4mDOXRep1": ["GSM4159483_ATACseq_D4mDOXRep1.bed.gz"], "ATACseq_D4mDOXRep2": ["GSM4159484_ATACseq_D4mDOXRep2.bed.gz"], "ATACseq_D4pDOXRep1": ["GSM4159485_ATACseq_D4pDOXRep1.bed.gz"], "ATACseq_D4pDOXRep2": ["GSM4159486_ATACseq_D4pDOXRep2.bed.gz"], "MCF7_WT_Vehicle": ["GSM3563750_MCF7_WT_Vehicle_peaks.bed.gz"], "MCF7_WT_E2": ["GSM3563751_MCF7_WT_E2_peaks.bed.gz"], "MCF7_Y537S_Vehicle": ["GSM3563753_MCF7_Y537S_Vehicle_peaks.bed.gz"], "MCF7_Y537S_E2": ["GSM3563754_MCF7_Y537S_E2_peaks.bed.gz"], "MCF7_D538G_Vehicle": ["GSM3563756_MCF7_D538G_Vehicle_peaks.bed.gz"], "MCF7_D538G_E2": ["GSM3563757_MCF7_D538G_E2_peaks.bed.gz"], "T47D_WT_Vehicle": ["GSM3563759_T47D_WT_Vehicle_peaks.bed.gz"], "T47D_WT_E2": ["GSM3563760_T47D_WT_E2_peaks.bed.gz"], "T47D_Y537S_Vehicle": ["GSM3563762_T47D_Y537S_Vehicle_peaks.bed.gz"], "T47D_Y537S_E2": ["GSM3563763_T47D_Y537S_E2_peaks.bed.gz"], "T47D_D538G_Vehicle": ["GSM3563765_T47D_D538G_Vehicle_peaks.bed.gz"], "T47D_D538G_E2": ["GSM3563766_T47D_D538G_E2_peaks.bed.gz"], "NC-m - H3K27ac": ["GSM4955046_LSJ-A-C-H3K27ac.narrowPeak.gz"], "NC-m - H3K4me3": ["GSM4955047_LSJ-A-C-H3K4me3.narrowPeak.gz"], "MiR-204-3p-m - H3K27ac": ["GSM4955049_LSJ-B-D-H3K27ac.narrowPeak.gz"], "MiR-204-3p-m - H3K4me3": ["GSM4955050_LSJ-B-D-H3K4me3.narrowPeak.gz"], "PETRI_rep1": ["GSM4513166_PETRI_rep1.bed.gz"], "PETRI_rep2": ["GSM4513167_PETRI_rep2.bed.gz"], "PETRI_rep3": ["GSM4513168_PETRI_rep3.bed.gz"], "BIOCHIP_rep1": ["GSM4513169_BIOCHIP_rep1.bed.gz"], "BIOCHIP_rep2": ["GSM4513170_BIOCHIP_rep2.bed.gz"], "BIOCHIP_rep3": ["GSM4513171_BIOCHIP_rep3.bed.gz"], "BIOCHIP_rep4": ["GSM4513172_BIOCHIP_rep4.bed.gz"], "AGO2_with_siRNA": ["GSM4318404_AGO2_with_siTP53_clusters.bed.gz"], "D597A_with_siRNA": ["GSM4318405_D597A_with_siTP53_clusters.bed.gz"], "AGO2_without_siRNA": ["GSM4332097_AGO2_without_siRNA_clusters.bed.gz"], "D597A_without_siRNA": ["GSM4332098_D597A_without_siRNA_clusters.bed.gz"], "D669A_without_siRNA": ["GSM4332099_D669A_without_siRNA_clusters.bed.gz"], "AGO2_with_siRNA_2": ["GSM4332100_AGO2_with_siLMNA_clusters.bed.gz"], "D597A_with_siRNA_2": ["GSM4332101_D597A_with_siLMNA_clusters.bed.gz"], "ATAC-seq for CD127high monocytes D92": ["GSM4819754_92_H.bed.gz"], "ATAC-seq for CD127low monocytes D92": ["GSM4819755_92_L.bed.gz"], "ATAC-seq for CD127high monocytes D94": ["GSM4819756_94_H.bed.gz"], "ATAC-seq for CD127low monocytes D94": ["GSM4819757_94_L.bed.gz"], "ATAC-seq for CD127high monocytes D95": ["GSM4819758_95_H.bed.gz"], "ATAC-seq for CD127low monocytes D95": ["GSM4819759_95_L.bed.gz"], "ATAC-seq_KHYG1_DMSO_rep1": ["GSM4878494_KHYG1_DMSO_rep1.rep1_sorted_peaks.narrowPeak.gz"], "ATAC-seq_KHYG1_DMSO_rep2": ["GSM4878495_KHYG1_DMSO_rep2.rep1_sorted_peaks.narrowPeak.gz"], "ATAC-seq_KHYG1_299_rep1": ["GSM4878496_KHYG1_299_rep1.rep1_sorted_peaks.narrowPeak.gz"], "ATAC-seq_KHYG1_299_rep2": ["GSM4878497_KHYG1_299_rep2.rep1_sorted_peaks.narrowPeak.gz"], "hESC_ctrl_ATAC-Seq_rep1": ["GSM4875714_hES_shCTRL_rep1-pr.idr0.05.bfilt.narrowPeak.gz"], "hESC_ctrl_ATAC-Seq_rep2": ["GSM4875715_hES_shCTRL_rep2-pr.idr0.05.bfilt.narrowPeak.gz"], "hESC_ctrl_ATAC-Seq_rep3": ["GSM4875716_hES_shCTRL_rep3-pr.idr0.05.bfilt.narrowPeak.gz"], "hESC_shRNA_ATAC-Seq_rep1": ["GSM4875717_hES_shOTUD5_rep1-pr.idr0.05.bfilt.narrowPeak.gz"], "hESC_shRNA_ATAC-Seq_rep2": ["GSM4875718_hES_shOTUD5_rep2-pr.idr0.05.bfilt.narrowPeak.gz"], "hESC_O5_shRNA_ATAC-Seq_rep3": ["GSM4875719_hES_shOTUD5_rep3-pr.idr0.05.bfilt.narrowPeak.gz"], "NC3_ctrl_ATAC-Seq_rep1": ["GSM4875720_NC3_shCTRL_rep1-pr.idr0.05.bfilt.narrowPeak.gz"], "NC3_ctrl_ATAC-Seq_rep2": ["GSM4875721_NC3_shCTRL_rep2-pr.idr0.05.bfilt.narrowPeak.gz"], "NC3_ctrl_ATAC-Seq_rep3": ["GSM4875722_NC3_shCTRL_rep3-pr.idr0.05.bfilt.narrowPeak.gz"], "NC3_shRNA_ATAC-Seq_rep1": ["GSM4875723_NC3_shOTUD5_rep1-pr.idr0.05.bfilt.narrowPeak.gz"], "NC3_shRNA_ATAC-Seq_rep2": ["GSM4875724_NC3_shOTUD5_rep2-pr.idr0.05.bfilt.narrowPeak.gz"], "NC3_shRNA_ATAC-Seq_rep3": ["GSM4875725_NC3_shOTUD5_rep3-pr.idr0.05.bfilt.narrowPeak.gz"], "CUT&RUN, ERH rep 1": ["GSM4798202_k562_cnr_erh_copy1.narrowPeak.gz"], "CUT&RUN, ERH rep 2": ["GSM4798203_k562_cnr_erh_copy2.narrowPeak.gz"], "CUT&RUN, WBP11 rep 1": ["GSM4798204_k562_cnr_wbp11_copy1.narrowPeak.gz"], "CUT&RUN, WBP11 rep 2": ["GSM4798205_k562_cnr_wbp11_copy2.narrowPeak.gz"], "RN077": ["GSM4332074_RN077_peaks.narrowPeak.gz"], "RN078": ["GSM4332075_RN078_peaks.narrowPeak.gz"], "RN079": ["GSM4332076_RN079_peaks.narrowPeak.gz"], "RN080": ["GSM4332077_RN080_peaks.narrowPeak.gz"], "RN081": ["GSM4332078_RN081_peaks.narrowPeak.gz"], "RN082": ["GSM4332079_RN082_peaks.narrowPeak.gz"], "RN083": ["GSM4332080_RN083_peaks.narrowPeak.gz"], "RN084": ["GSM4332081_RN084_peaks.narrowPeak.gz"], "Na\u00efve B cells - Tonsil 89": ["GSM4837473_NaiveB_B1_T1.ATACseq.narrowPeak.gz"], "Na\u00efve B cells - Tonsil 90": ["GSM4837474_NaiveB_B2_T1.ATACseq.narrowPeak.gz"], "Na\u00efve B cells - Tonsil 100": ["GSM4837475_NaiveB_B3_T1.ATACseq.narrowPeak.gz"], "Memory B cells - Tonsil 89": ["GSM4837476_MemoryB_B1_T1.ATACseq.narrowPeak.gz"], "Memory B cells - Tonsil 90": ["GSM4837477_MemoryB_B2_T1.ATACseq.narrowPeak.gz"], "Memory B cells - Tonsil 100": ["GSM4837478_MemoryB_B3_T1.ATACseq.narrowPeak.gz"], "Light Zone GC B cells - Tonsil 89": ["GSM4837479_Lightzone_germ_B1_T1.ATACseq.narrowPeak.gz"], "Light Zone GC B cells - Tonsil 90": ["GSM4837480_Lightzone_germ_B2_T1.ATACseq.narrowPeak.gz"], "Light Zone GC B cells - Tonsil 100": ["GSM4837481_Lightzone_germ_B3_T1.ATACseq.narrowPeak.gz"], "Dark Zone GC B cells - Tonsil 89": ["GSM4837482_Darkzone_germ_B1_T1.ATACseq.narrowPeak.gz"], "Dark Zone GC B cells - Tonsil 90": ["GSM4837483_Darkzone_germ_B2_T1.ATACseq.narrowPeak.gz"], "Dark Zone GC B cells - Tonsil 100": ["GSM4837484_Darkzone_germ_B3_T1.ATACseq.narrowPeak.gz"], "Plasma B cells - Tonsil 89": ["GSM4837485_Plasma_B1_T1.ATACseq.narrowPeak.gz"], "Plasma B cells - Tonsil 90": ["GSM4837486_Plasma_B2_T1.ATACseq.narrowPeak.gz"], "Plasma B cells - Tonsil 100": ["GSM4837487_Plasma_B3_T1.ATACseq.narrowPeak.gz"], "ATAC-Seq LIver39_CD49a_neg_unstim": ["GSM4801585_BSF_0660_HCG27BBXY_2_Liver39_CD45a_neg_unstim_S55909_sorted_mq10.bed.gz"], "ATAC-Seq LIver39_CD49a_pos_unstim": ["GSM4801586_BSF_0660_HCG27BBXY_3_Liver39_CD49a_pos_unstim_S55926_sorted_mq10.bed.gz"], "ATAC-Seq LIver40_CD49a_neg_unstim": ["GSM4801587_BSF_0660_HCG27BBXY_2_Liver40_CD49a_neg_unstim_S55907_sorted_mq10.bed.gz"], "ATAC-Seq LIver40_CD49a_pos_unstim": ["GSM4801588_BSF_0660_HCG27BBXY_2_Liver40_CD49a_pos_unstim_S55905_sorted_mq10.bed.gz"], "ATAC-Seq LIver41_CD49a_neg_unstim": ["GSM4801589_BSF_0660_HCG27BBXY_2_Liver41_CD49a_neg_unstim_S55908_sorted_mq10.bed.gz"], "ATAC-Seq LIver41_CD49a_pos_unstim": ["GSM4801590_BSF_0660_HCG27BBXY_2_Liver41_CD49a_pos_unstim_S55913_sorted_mq10.bed.gz"], "ATAC-Seq LIver39_CD49a_neg_stim": ["GSM4801591_BSF_0660_HCG27BBXY_2_Liver39_CD45a_neg_stim_S55910_sorted_mq10.bed.gz"], "ATAC-Seq LIver39_CD49a_pos_stim": ["GSM4801592_BSF_0660_HCG27BBXY_3_Liver39_CD49a_pos_stim_S55920_sorted_mq10.bed.gz"], "ATAC-Seq LIver40_CD49a_neg_stim": ["GSM4801593_BSF_0660_HCG27BBXY_3_Liver40_CD49a_neg_stim_S55924_sorted_mq10.bed.gz"], "ATAC-Seq LIver40_CD49a_pos_stim": ["GSM4801594_BSF_0660_HCG27BBXY_3_Liver40_CD49a_pos_stim_S55925_sorted_mq10.bed.gz"], "ATAC-Seq LIver41_CD49a_pos_stim": ["GSM4801595_BSF_0660_HCG27BBXY_2_Liver41_CD49a_neg_stim_S55903_sorted_mq10.bed.gz"], "ATAC-Seq LIver41_CD49a_neg_stim": ["GSM4801596_BSF_0660_HCG27BBXY_2_Liver41_CD49a_pos_stim_S55914_sorted_mq10.bed.gz"], "NK cells ETS1 ChIP": ["GSM3520734_ETS1_NK_peaks.narrowPeak.gz"], "MDA231ERb_veh_H3K27ac_rep1": ["GSM4710498_KA34.FCHNKLLBBXX_L6_R1_ICGGCTATG-TATAGCCT.PE_macs2_peaks.bed.gz"], "MDA231ERb_veh_H3K27ac_rep2": ["GSM4710499_KA61.FCHNKLLBBXX_L8_R1_IGAATTCGT-TAATCTTA.PE_macs2_peaks.bed.gz"], "MDA231ERb_E2_H3K27ac_rep1": ["GSM4710500_KA37.FCHNKLLBBXX_L6_R1_ITCTCGCGC-CCTATCCT.PE_macs2_peaks.bed.gz"], "MDA231ERb_E2_H3K27ac_rep2": ["GSM4710501_KA38.FCHNKLLBBXX_L7_R1_IAGCGATAG-GGCTCTGA.PE_macs2_peaks.bed.gz"], "MDA231ERb_TNFa_H3K27ac_rep1": ["GSM4710502_KA35.FCHNKLLBBXX_L6_R1_ITCCGCGAA-ATAGAGGC.PE_macs2_peaks.bed.gz"], "MDA231ERb_TNFa_H3K27ac_rep2": ["GSM4710503_KA62.FCHNKLLBBXX_L8_R1_ICTGAAGCT-CAGGACGT.PE_macs2_peaks.bed.gz"], "MDA231ERb_E2+TNFa_H3K27ac_rep1": ["GSM4710504_KA40.FCHNKLLBBXX_L7_R1_IATTACTCG-AGGCGAAG.PE_macs2_peaks.bed.gz"], "MDA231ERb_E2+TNFa_H3K27ac_rep2": ["GSM4710505_KA64.FCHNKLLBBXX_L8_R1_ITAATGCGC-GTACTGAC.PE_macs2_peaks.bed.gz"], "MDA231ERb_veh_NFkB_rep1": ["GSM4710514_E2-MDA_1-NF-9.FCHWYW5BBXX_L1_R1_IGATCAGCG.PE_macs2_peaks.bed.gz"], "MDA231ERb_veh_NFkB_rep2": ["GSM4710515_E3-MDA_1-NF-17.FCHWYW5BBXX_L2_R1_ITGTACCTT.PE_macs2_peaks.bed.gz"], "MDA231ERb_E2_NFkB_rep1": ["GSM4710516_E2-MDA_3-NF-11.FCHWYW5BBXX_L1_R1_IGGCTACAG.PE_macs2_peaks.bed.gz"], "MDA231ERb_E2_NFkB_rep2": ["GSM4710517_E3-MDA_3-NF-19.FCHWYW5BBXX_L2_R1_ITCTGCTGT.PE_macs2_peaks.bed.gz"], "MDA231ERb_TNFa_NFkB_rep1": ["GSM4710518_E2-MDA_2-NF-10.FCHWYW5BBXX_L1_R1_ITAGCTTGT.PE_macs2_peaks.bed.gz"], "MDA231ERb_TNFa_NFkB_rep2": ["GSM4710519_E3-MDA_2-NF-18.FCHWYW5BBXX_L2_R1_ITTCTGTGT.PE_macs2_peaks.bed.gz"], "MDA231ERb_E2+TNFa_NFkB_rep1": ["GSM4710520_E2-MDA_4-NF-12.FCHWYW5BBXX_L1_R1_ICTTGTACT.PE_macs2_peaks.bed.gz"], "MDA231ERb_E2+TNFa_NFkB_rep2": ["GSM4710521_E3-MDA_4-NF-20.FCHWYW5BBXX_L2_R1_ITTGGAGGT.PE_macs2_peaks.bed.gz"], "MDA231ERb_veh_RNAPIIpS2": ["GSM4710522_E3-MDA_1-pol-21.FCHWYW5BBXX_L2_R1_ITCGAGCGT.PE_macs2_peaks.bed.gz"], "MDA231ERb_E2_RNAPIIpS2": ["GSM4710523_E3-MDA_2-pol-22.FCHWYW5BBXX_L2_R1_ITGATACGT.PE_macs2_peaks.bed.gz"], "MDA231ERb_TNFa_RNAPIIpS2": ["GSM4710524_E3-MDA_3-pol-23.FCHWYW5BBXX_L2_R1_IGTGCTACC.PE_macs2_peaks.bed.gz"], "MDA231ERb_E2+TNFa_RNAPIIpS2": ["GSM4710525_E3-MDA_4-pol-24.FCHWYW5BBXX_L2_R1_IGGTTGGAC.PE_macs2_peaks.bed.gz"], "U87MG wild type rep 1": ["GSM4704852_CRISPR_p53.U-87_MG_wild_type_rep1_TAC.bed.gz"], "U87MG wild type rep 2": ["GSM4704853_CRISPR_p53.U-87_MG_wild_type_rep2_ACG.bed.gz"], "U87MG wild type rep 3": ["GSM4704854_CRISPR_p53.U-87_MG_wild_type_rep3_GCT.bed.gz"], "U87MG TP53 KO c3.4 rep 1": ["GSM4704855_CRISPR_p53.clone_e5_2-3-4_rep1_CAC.bed.gz"], "U87MG TP53 KO c3.4 rep 2": ["GSM4704856_CRISPR_p53.clone_e5_2-3-4_rep2_AGT.bed.gz"], "U87MG TP53 KO c3.4 rep 3": ["GSM4704857_CRISPR_p53.clone_e5_2-3-4_rep3_GCG.bed.gz"], "U87MG TP53 KO c4.2 rep 1": ["GSM4704858_CRISPR_p53.clone_e5_2-4-2_rep1_ACG.bed.gz"], "U87MG TP53 KO c4.2 rep 2": ["GSM4704859_CRISPR_p53.clone_e5_2-4-2_rep2_GCT.bed.gz"], "U87MG TP53 KO c4.2 rep 3": ["GSM4704860_CRISPR_p53.clone_e5_2-4-2_rep3_ACC.bed.gz"], "U87MG TP53 KO c4.8 rep 1": ["GSM4704861_CRISPR_p53.clone_e5_2-4-8_rep1_GCG.bed.gz"], "U87MG TP53 KO c4.8 rep 2": ["GSM4704862_CRISPR_p53.clone_e5_2-4-8_rep2_ATG.bed.gz"], "U87MG TP53 KO c4.8 rep 3": ["GSM4704863_CRISPR_p53.clone_e5_2-4-8_rep3_TAC.bed.gz"], "U87MG TP53 KO c5.5 rep 1": ["GSM4704864_CRISPR_p53.clone_e5_2-5-5_rep1_ATG.bed.gz"], "U87MG TP53 KO c5.5 rep 2": ["GSM4704865_CRISPR_p53.clone_e5_2-5-5_rep2_TAC.bed.gz"], "U87MG TP53 KO c5.5 rep 3": ["GSM4704866_CRISPR_p53.clone_e5_2-5-5_rep3_ACG.bed.gz"], "U87MG TP53 KO c5.9 rep 1": ["GSM4704867_CRISPR_p53.clone_e5_2-5-9_rep1_AGT.bed.gz"], "U87MG TP53 KO c5.9 rep 2": ["GSM4704868_CRISPR_p53.clone_e5_2-5-9_rep2_GCG.bed.gz"], "U87MG TP53 KO c5.9 rep 3": ["GSM4704869_CRISPR_p53.clone_e5_2-5-9_rep3_ATG.bed.gz"], "U87MG TP53 KO c5.11 rep 1": ["GSM4704870_CRISPR_p53.clone_e5_2-5-11_rep1_ACC.bed.gz"], "U87MG TP53 KO c5.11 rep 2": ["GSM4704871_CRISPR_p53.clone_e5_2-5-11_rep2_CAC.bed.gz"], "U87MG TP53 KO c5.11 rep 3": ["GSM4704872_CRISPR_p53.clone_e5_2-5-11_rep3_AGT.bed.gz"], "U87MG TP53 KO c5.12 rep 1": ["GSM4704873_CRISPR_p53.clone_e5_2-5-12_rep1_GCT.bed.gz"], "U87MG TP53 KO c5.12 rep 2": ["GSM4704874_CRISPR_p53.clone_e5_2-5-12_rep2_ACC.bed.gz"], "U87MG TP53 KO c5.12 rep 3": ["GSM4704875_CRISPR_p53.clone_e5_2-5-12_rep3_CAC.bed.gz"], "H3K27ac ChIP-seq from Basal1": ["GSM4483246_Basal1_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Basal2": ["GSM4483247_Basal2_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Basal1/FOXA1 o.e tumor": ["GSM4483248_Basal1_FOXA1_o.e_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Basal2/FOXA1 o.e tumor": ["GSM4483249_Basal2_FOXA1_o.e_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Basal1/BMP o.e CAF": ["GSM4483250_Basal1_BMP_o.e_CAF_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Basal2/BMP o.e CAF": ["GSM4483251_Basal2_BMP_o.e_CAF_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Basal1/BMP o.e CAF-FOXA1 k.o tumor": ["GSM4483252_Basal1_BMP_o.e_CAF-FOXA1_k.o_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Basal2/BMP o.e CAF-FOXA1 k.o tumor": ["GSM4483253_Basal2_BMP_o.e_CAF-FOXA1_k.o_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Luminal1": ["GSM4483256_Luminal1_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Luminal2": ["GSM4483257_Luminal2_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Luminal1/FOXA1 k.o tumor": ["GSM4483258_Luminal1_FOXA1_k.o_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Luminal2/FOXA1 k.o tumor": ["GSM4483259_Luminal2_FOXA1_k.o_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Luminal1/BMP k.o CAF": ["GSM4483260_Luminal1_BMP_k.o_CAF_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Luminal2/BMP k.o CAF": ["GSM4483261_Luminal2_BMP_k.o_CAF_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Luminal1/BMP k.o CAF-FOXA1 o.e tumor": ["GSM4483262_Luminal1_BMP_k.o_CAF-FOXA1_o.e_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz"], "H3K27ac ChIP-seq from Luminal2/BMP k.o CAF-FOXA1 o.e tumor": ["GSM4483263_Luminal2_BMP_k.o_CAF-FOXA1_o.e_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz"], "ATAC-seq from Basal1": ["GSM4201661_Basal1_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Basal2": ["GSM4201662_Basal2_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Basal1/FOXA1 o.e tumor": ["GSM4201663_Basal1_FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Basal2/FOXA1 o.e tumor": ["GSM4201664_Basal2_FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Basal1/BMP o.e CAF": ["GSM4201665_Basal1_BMP_o.e_CAF_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Basal2/BMP o.e CAF": ["GSM4201666_Basal2_BMP_o.e_CAF_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Basal1/BMP o.e CAF-FOXA1 k.o tumor": ["GSM4201667_Basal1_BMP_o.e_CAF-FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Basal2/BMP o.e CAF-FOXA1 k.o tumor": ["GSM4201668_Basal2_BMP_o.e_CAF-FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Luminal1": ["GSM4201669_Luminal1_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Luminal2": ["GSM4201670_Luminal2_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Luminal1/FOXA1 k.o tumor": ["GSM4201671_Luminal1_FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Luminal2/FOXA1 k.o tumor": ["GSM4201672_Luminal2_FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Luminal1/BMP k.o CAF": ["GSM4201673_Luminal1_BMP_k.o_CAF_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Luminal2/BMP k.o CAF": ["GSM4201674_Luminal2_BMP_k.o_CAF_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Luminal1/BMP k.o CAF-FOXA1 o.e tumor": ["GSM4201675_Luminal1_BMP_k.o_CAF-FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz"], "ATAC-seq from Luminal2/BMP k.o CAF-FOXA1 o.e tumor": ["GSM4201676_Luminal2_BMP_k.o_CAF-FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Basal1": ["GSM4201823_Basal1_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Basal2": ["GSM4201824_Basal2_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Basal1/FOXA1 o.e tumor": ["GSM4201825_Basal1_FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Basal2/FOXA1 o.e tumor": ["GSM4201826_Basal2_FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Basal1/BMP o.e CAF": ["GSM4201827_Basal1_BMP_o.e_CAF_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Basal2/BMP o.e CAF": ["GSM4201828_Basal2_BMP_o.e_CAF_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Basal1/BMP o.e CAF-FOXA1 k.o tumor": ["GSM4201829_Basal1_BMP_o.e_CAF-FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Basal2/BMP o.e CAF-FOXA1 k.o tumor": ["GSM4201830_Basal2_BMP_o.e_CAF-FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Luminal1": ["GSM4201833_Luminal1_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Luminal2": ["GSM4201834_Luminal2_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Luminal1/FOXA1 k.o tumor": ["GSM4201835_Luminal1_FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Luminal2/FOXA1 k.o tumor": ["GSM4201836_Luminal2_FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Luminal1/BMP k.o CAF": ["GSM4201837_Luminal1_BMP_k.o_CAF_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Luminal2/BMP k.o CAF": ["GSM4201838_Luminal2_BMP_k.o_CAF_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Luminal1/BMP k.o CAF-FOXA1 o.e tumor": ["GSM4201839_Luminal1_BMP_k.o_CAF-FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz"], "FOXA1 ChIP-seq from Luminal2/BMP k.o CAF-FOXA1 o.e tumor": ["GSM4201840_Luminal2_BMP_k.o_CAF-FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz"], "S18 -Dox10ug-H3K27ac_rep1": ["GSM4796499_S18-Dox10ug-H3K27ac-Rep1.bed.gz"], "S18 -Dox10ug-H3K27ac_rep2": ["GSM4796500_S18-Dox10ug-H3K27ac-Rep2.bed.gz"], "S18-EBNA2Con-H3K27ac-rep1": ["GSM4796501_S18-EBNA2Con-H3K27ac-Rep1.bed.gz"], "S18-EBNA2Con-H3K27ac-rep2": ["GSM4796502_S18-EBNA2Con-H3K27ac-Rep2.bed.gz"], "S18-EBNA2Dox10ug-H3K27ac-rep1": ["GSM4796503_S18-EBNA2Dox10ug-H3K27ac-Rep1.bed.gz"], "S18-EBNA2Dox10ug-H3K27ac-rep2": ["GSM4796504_S18-EBNA2Dox10ug-H3K27ac-Rep2.bed.gz"], "BJAB-EBNA2-H3K27ac-Rep1": ["GSM5426082_EBNA2-H3K27ac-Rep1.bed.gz"], "BJAB-EBNA2-H3K27ac-Rep2": ["GSM5426083_EBNA2-H3K27ac-Rep2.bed.gz"], "BJAB-SCNG-H3K27ac-Rep1": ["GSM5426085_SCNG-H3K27ac-Rep1.bed.gz"], "BJAB-SCNG-H3K27ac-Rep2": ["GSM5426086_SCNG-H3K27ac-Rep2.bed.gz"], "BJAB-EBNA2-ATAC-Rep1": ["GSM5426087_EBNA2-ATAC-Rep1_peaks.broadPeak.gz"], "BJAB-EBNA2-ATAC-Rep2": ["GSM5426088_EBNA2-ATAC-Rep2_peaks.broadPeak.gz"], "BJAB-SCNG-ATAC-Rep1": ["GSM5426089_SCNG-ATAC-Rep1_peaks.broadPeak.gz"], "BJAB-SCNG-ATAC-Rep2": ["GSM5426090_SCNG-ATAC-Rep2_peaks.broadPeak.gz"], "U2OSdcp1a_hypertonic_replicate 1": ["GSM4664298_U2OSdcp1a_hypertonic_r1.genes.bed.gz"], "U2OSdcp1a_hypertonic_replicate 2": ["GSM4664299_U2OSdcp1a_hypertonic_r2.genes.bed.gz"], "U2OSdcp1a_isotonic_replicate 1": ["GSM4664300_U2OSdcp1a_isotonic_r1.genes.bed.gz"], "U2OSdcp1a_isotonic_replicate 2": ["GSM4664301_U2OSdcp1a_isotonic_r2.genes.bed.gz"], "ChIP-Seq BEAS-2B FH3.3 NT-Empty": ["GSM4732793_FH3.3-NT-Empty_peaks.narrowPeak.gz"], "ChIP-Seq BEAS-2B FH3.3 NT-H3.1Loop": ["GSM4732795_FH3.3-NT-H3.1-Loop_peaks.narrowPeak.gz"], "ChIP-Seq BEAS-2B NT-H3.1poly(A)": ["GSM4732797_NT-H3.1-PolyA-H3.3_peaks.narrowPeak.gz"], "ChIP-Seq BEAS-2B NT-H3.1Loop": ["GSM4732799_NT-3.1Loop-H3.3_peaks.narrowPeak.gz"], "ChIP-Seq BEAS-2B NT-Empty": ["GSM4732801_NT-Empty-H3.3_peaks.narrowPeak.gz"], "ChIP-Seq BEAS-2B As 96h": ["GSM4732803_As-96h-H3.3_peaks.narrowPeak.gz"], "ChIP-Seq BEAS-2B Control of As 96h": ["GSM4732805_Ctrl-96h-H3.3_peaks.narrowPeak.gz"], "IFO001 Activated": ["GSM4758351_L2_bio1_act_TKD180802547_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "GEN157 Activated": ["GSM4758352_L2_bio2_act_TKD180901491_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "GEN170 Activated": ["GSM4758353_L2_bio3_act_TKD180802551_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "GEN220 Activated": ["GSM4758354_L3_bio4_act_TKD180802553_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "IFO189 Activated": ["GSM4758355_L3_bio5_act_TKD180802555_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "IFO139 Activated": ["GSM4758356_L3_bio6_act_TKD180901493_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "IFO001 Quiescent": ["GSM4758357_L2_bio1_con_TKD180802548_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "GEN157 Quiescent": ["GSM4758358_L2_bio2_con_TKD180802550_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "GEN170 Quiescent": ["GSM4758359_L2_bio3_con_TKD180802552_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "GEN220 Quiescent": ["GSM4758360_L3_bio4_con_TKD180802554_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "IFO189 Quiescent": ["GSM4758361_L3_bio5_con_TKD180901492_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "IFO139 Quiescent": ["GSM4758362_L3_bio6_con_TKD180802558_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Donor 1 D0 H3K27ac ChIP-seq": ["GSM4250941_AEC_Donor1_H3K27ac_D0_VS_AEC_Donor1_INPUT_D0.narrowPeak.gz"], "Donor 1 D4 H3K27ac ChIP-seq": ["GSM4250942_AEC_Donor1_H3K27ac_D4_VS_AEC_Donor1_INPUT_D4.narrowPeak.gz"], "Donor 1 D6 H3K27ac ChIP-seq": ["GSM4250943_AEC_Donor1_H3K27ac_D6_VS_AEC_Donor1_INPUT_D6.narrowPeak.gz"], "Donor 2 D0 ATAC-seq": ["GSM4250944_AEC_Donor2_ATAC_D0.narrowPeak.gz"], "06MMDN H3K04ME1": ["GSM4910537_06MMDN_H3K04ME1_PEAKS.bed.bz2"], "06MMDN H3K04ME3": ["GSM4910538_06MMDN_H3K04ME3_PEAKS.bed.bz2"], "06MMDN H3K27ME3": ["GSM4910539_06MMDN_H3K27ME3_PEAKS.bed.bz2"], "07FMDY H3K04ME1": ["GSM4910541_07FMDY_H3K04ME1_PEAKS.bed.bz2"], "07FMDY H3K04ME3": ["GSM4910542_07FMDY_H3K04ME3_PEAKS.bed.bz2"], "07FMDY H3K27ME3": ["GSM4910543_07FMDY_H3K27ME3_PEAKS.bed.bz2"], "11MMPN H3K04ME1": ["GSM4910545_11MMDN_H3K04ME1_PEAKS.bed.bz2"], "11MMPN H3K04ME3": ["GSM4910546_11MMDN_H3K04ME3_PEAKS.bed.bz2"], "11MMPN H3K27ME3": ["GSM4910547_11MMPN_H3K27ME3_PEAKS.bed.bz2"], "12FMPN H3K04ME1": ["GSM4910549_12FMPN_H3K04ME1_PEAKS.bed.bz2"], "12FMPN H3K04ME3": ["GSM4910550_12FMPN_H3K04ME3_PEAKS.bed.bz2"], "12FMPN H3K27ME3": ["GSM4910551_12FMPN_H3K27ME3_PEAKS.bed.bz2"], "13MMPN H3K04ME1": ["GSM4910553_13MMPN_H3K04ME1_PEAKS.bed.bz2"], "13MMPN H3K04ME3": ["GSM4910554_13MMPN_H3K04ME3_PEAKS.bed.bz2"], "13MMPN H3K27ME3": ["GSM4910555_13MMPN_H3K27ME3_PEAKS.bed.bz2"], "18MMPN H3K04ME1": ["GSM4910557_18MMPN_H3K04ME1_PEAKS.bed.bz2"], "18MMPN H3K04ME3": ["GSM4910558_18MMPN_H3K04ME3_PEAKS.bed.bz2"], "18MMPN H3K27ME3": ["GSM4910559_18MMPN_H3K27ME3_PEAKS.bed.bz2"], "Pol2_Mock": ["GSM4721536_Mock_Pol2_peaks.narrowPeak.gz"], "Pol2_s5p_Mock": ["GSM4721537_Mock_Pol2_s5p_peaks.narrowPeak.gz"], "Pol2_s2p_Mock": ["GSM4721538_Mock_Pol2_s2p_peaks.narrowPeak.gz"], "Pol2_WSN3M": ["GSM4721539_WSN3M_Pol2_peaks.narrowPeak.gz"], "Pol2_s5p_WSN3M": ["GSM4721540_WSN3M_Pol2_s5p_peaks.narrowPeak.gz"], "Pol2_s2p_WSN3M": ["GSM4721541_WSN3M_Pol2_s2p_peaks.narrowPeak.gz"], "Pol2_WSNdelNS1": ["GSM4721542_WSNdelNS1_Pol2_peaks.narrowPeak.gz"], "Pol2_s5p_WSNdelNS1": ["GSM4721543_WSNdelNS1_Pol2_s5p_peaks.narrowPeak.gz"], "Pol2_s2p_WSNdelNS1": ["GSM4721544_WSNdelNS1_Pol2_s2p_peaks.narrowPeak.gz"], "Pol2_WSNWT": ["GSM4721545_WSNWT_Pol2_peaks.narrowPeak.gz"], "Pol2_s5p_WSNWT": ["GSM4721546_WSNWT_Pol2_s5p_peaks.narrowPeak.gz"], "Pol2_s2p_WSNWT": ["GSM4721547_WSNWT_Pol2_s2p_peaks.narrowPeak.gz"], "H9ESC_PM [ATAC-seq]": ["GSM4506443_H9PM.narrowPeak.gz"], "H9ESC_BA_Day4 [ATAC-seq]": ["GSM4506444_H9BA_D4.narrowPeak.gz"], "H9ESC_BA_Day8 [ATAC-seq]": ["GSM4506445_H9BA_D8.narrowPeak.gz"], "H9ESC_BA_Day15 [ATAC-seq]": ["GSM4506446_H9BA_D15.narrowPeak.gz"], "H9ESC_BA_Day20 [ATAC-seq]": ["GSM4506447_H9BA_D20.narrowPeak.gz"], "H9ESC_BA_Day24 [ATAC-seq]": ["GSM4506448_H9BA_D24.narrowPeak.gz"], "H3K27me3 - CD34+ CD1- donor Th1": ["GSM4565992_macs2_me3_34P1M_d1_1.bam_peaks.broadPeak.gz"], "H3K27me3 - CD34+ CD1+ donor Th1": ["GSM4565993_macs2_me3_34P1P_d1_2.bam_peaks.broadPeak.gz"], "H3K27me3 - CD34+ CD4+ donor Th1": ["GSM4565994_macs2_me3_34P4P_d1_3.bam_peaks.broadPeak.gz"], "H3K27me3 - ISP CD28+ donor Th1": ["GSM4565995_macs2_me3_DP3M_d1_5.bam_peaks.broadPeak.gz"], "H3K27me3 - DP CD3- donor Th1": ["GSM4565996_macs2_me3_DP3P_d1_6.bam_peaks.broadPeak.gz"], "H3K27me3 - DP CD3+ donor Th1": ["GSM4565997_macs2_me3_ISP_d1_4.bam_peaks.broadPeak.gz"], "H3K27me3 - SP CD4+ donor Th1": ["GSM4565998_macs2_me3_SP4P_d1_7.bam_peaks.broadPeak.gz"], "H3K27me3 - SP CD8+ donor Th1": ["GSM4565999_macs2_me3_SP8P_d1_8.bam_peaks.broadPeak.gz"], "H3K27me3 - \u03b3\u03b4 CD1- donor Th1": ["GSM4566000_macs2_me3_gd1P_d1_10.bam_peaks.broadPeak.gz"], "H3K27me3 - \u03b3\u03b4 CD1+ donor Th1": ["GSM4566001_macs2_me3_gd1M_d1_9.bam_peaks.broadPeak.gz"], "H3K27me3 - HPC donor CB1": ["GSM4566002_macs2_me3_CB_d1_11.bam_peaks.broadPeak.gz"], "H3K27me3 - CD34+ CD1- donor Th2": ["GSM4566004_macs2_me3_34P1M_d2_13.bam_peaks.broadPeak.gz"], "H3K27me3 - CD34+ CD1+ donor Th2": ["GSM4566005_macs2_me3_34P1P_d2_14.bam_peaks.broadPeak.gz"], "H3K27me3 - CD34+ CD4+ donor Th2": ["GSM4566006_macs2_me3_34P4P_d2_15.bam_peaks.broadPeak.gz"], "H3K27me3 - ISP CD28+ donor Th2": ["GSM4566007_macs2_me3_DP3M_d2_17.bam_peaks.broadPeak.gz"], "H3K27me3 - DP CD3- donor Th2": ["GSM4566008_macs2_me3_DP3P_d2_18.bam_peaks.broadPeak.gz"], "H3K27me3 - DP CD3+ donor Th2": ["GSM4566009_macs2_me3_ISP_d2_16.bam_peaks.broadPeak.gz"], "H3K27me3 - SP CD4+ donor Th2": ["GSM4566010_macs2_me3_SP4P_d2_19.bam_peaks.broadPeak.gz"], "H3K27me3 - SP CD8+ donor Th2": ["GSM4566011_macs2_me3_SP8P_d2_20.bam_peaks.broadPeak.gz"], "H3K27me3 - \u03b3\u03b4 CD1- donor Th2": ["GSM4566012_macs2_me3_gd1M_d2_21.bam_peaks.broadPeak.gz"], "H3K27me3 - \u03b3\u03b4 CD1+ donor Th2": ["GSM4566013_macs2_me3_gd1P_d2_22.bam_peaks.broadPeak.gz"], "H3K27me3 - HPC donor CB2": ["GSM4566014_macs2_me3_CB_d2_23.bam_peaks.broadPeak.gz"], "H3K4me3 - CD34+ CD1- donor Th1": ["GSM4566016_macs2_k4_34P1M_d1_25.bam_summits.bed.gz"], "H3K4me3 - CD34+ CD1+ donor Th1": ["GSM4566017_macs2_k4_34P1P_d1_26.bam_summits.bed.gz"], "H3K4me3 - CD34+ CD4+ donor Th1": ["GSM4566018_macs2_k4_34P4P_d1_27.bam_summits.bed.gz"], "H3K4me3 - ISP CD28+ donor Th1": ["GSM4566019_macs2_k4_DP3M_d1_29.bam_summits.bed.gz"], "H3K4me3 - DP CD3- donor Th1": ["GSM4566020_macs2_k4_DP3P_d1_30.bam_summits.bed.gz"], "H3K4me3 - DP CD3+ donor Th1": ["GSM4566021_macs2_k4_ISP_d1_28.bam_summits.bed.gz"], "H3K4me3 - SP CD4+ donor Th1": ["GSM4566022_macs2_k4_SP4P_d1_31.bam_summits.bed.gz"], "H3K4me3 - SP CD8+ donor Th1": ["GSM4566023_macs2_k4_SP8P_d1_32.bam_summits.bed.gz"], "H3K4me3 - \u03b3\u03b4 CD1- donor Th1": ["GSM4566024_macs2_k4_gd1M_d1_33.bam_summits.bed.gz"], "H3K4me3 - \u03b3\u03b4 CD1+ donor Th1": ["GSM4566025_macs2_k4_gd1P_d1_34.bam_summits.bed.gz"], "H3K4me3 - HPC donor CB1": ["GSM4566026_macs2_k4_CB_d1_35.bam_summits.bed.gz"], "H3K4me3 - CD34+ CD1- donor Th2": ["GSM4566027_macs2_k4_34P1M_d2_36.bam_summits.bed.gz"], "H3K4me3 - CD34+ CD1+ donor Th2": ["GSM4566028_macs2_k4_34P1P_d2_37.bam_summits.bed.gz"], "H3K4me3 - CD34+ CD4+ donor Th2": ["GSM4566029_macs2_k4_34P4P_d2_38.bam_summits.bed.gz"], "H3K4me3 - ISP CD28+ donor Th2": ["GSM4566030_macs2_k4_DP3M_d2_40.bam_summits.bed.gz"], "H3K4me3 - DP CD3- donor Th2": ["GSM4566031_macs2_k4_DP3P_d2_41.bam_summits.bed.gz"], "H3K4me3 - DP CD3+ donor Th2": ["GSM4566032_macs2_k4_ISP_d2_39.bam_summits.bed.gz"], "H3K4me3 - SP CD4+ donor Th2": ["GSM4566033_macs2_k4_SP4P_d2_42.bam_summits.bed.gz"], "H3K4me3 - SP CD8+ donor Th2": ["GSM4566034_macs2_k4_SP8P_d2_43.bam_summits.bed.gz"], "H3K4me3 - \u03b3\u03b4 CD1- donor Th2": ["GSM4566035_macs2_k4_gd1M_d2_44.bam_summits.bed.gz"], "H3K4me3 - \u03b3\u03b4 CD1+ donor Th2": ["GSM4566036_macs2_k4_gd1P_d2_45.bam_summits.bed.gz"], "H3K4me3 - HPC donor CB2": ["GSM4566037_macs2_k4_CB_d2_46.bam_summits.bed.gz"], "H3K27ac - CD34+ CD1- donor Th1": ["GSM4566038_macs2_ac_34P1M_d1_47.bam_summits.bed.gz"], "H3K27ac - CD34+ CD1+ donor Th1": ["GSM4566039_macs2_ac_34P1P_d1_48.bam_summits.bed.gz"], "H3K27ac - CD34+ CD4+ donor Th1": ["GSM4566040_macs2_ac_34P4P_d1_49.bam_summits.bed.gz"], "H3K27ac - ISP CD28+ donor Th1": ["GSM4566041_macs2_ac_DP3M_d1_51.bam_summits.bed.gz"], "H3K27ac - DP CD3- donor Th1": ["GSM4566042_macs2_ac_DP3P_d1_52.bam_summits.bed.gz"], "H3K27ac - DP CD3+ donor Th1": ["GSM4566043_macs2_ac_ISP_d1_50.bam_summits.bed.gz"], "H3K27ac - SP CD4+ donor Th1": ["GSM4566044_macs2_ac_SP4P_d1_53.bam_summits.bed.gz"], "H3K27ac - SP CD8+ donor Th1": ["GSM4566045_macs2_ac_SP8P_d1_54.bam_summits.bed.gz"], "H3K27ac - \u03b3\u03b4 CD1- donor Th1": ["GSM4566046_macs2_ac_gd1M_d1_55.bam_summits.bed.gz"], "H3K27ac - \u03b3\u03b4 CD1+ donor Th1": ["GSM4566047_macs2_ac_gd1P_d1_56.bam_summits.bed.gz"], "H3K27ac - HPC donor CB1": ["GSM4566048_macs2_ac_CB_d1_57.bam_summits.bed.gz"], "H3K27ac - CD34+ CD1- donor Th2": ["GSM4566049_macs2_ac_34P1M_d2_58.bam_summits.bed.gz"], "H3K27ac - CD34+ CD1+ donor Th2": ["GSM4566050_macs2_ac_34P1P_d2_59.bam_summits.bed.gz"], "H3K27ac - CD34+ CD4+ donor Th2": ["GSM4566051_macs2_ac_34P4P_d2_60.bam_summits.bed.gz"], "H3K27ac - ISP CD28+ donor Th2": ["GSM4566052_macs2_ac_DP3M_d2_62.bam_summits.bed.gz"], "H3K27ac - DP CD3- donor Th2": ["GSM4566053_macs2_ac_DP3P_d2_63.bam_summits.bed.gz"], "H3K27ac - DP CD3+ donor Th2": ["GSM4566054_macs2_ac_ISP_d2_61.bam_summits.bed.gz"], "H3K27ac - SP CD4+ donor Th2": ["GSM4566055_macs2_ac_SP4P_d2_64.bam_summits.bed.gz"], "H3K27ac - SP CD8+ donor Th2": ["GSM4566056_macs2_ac_SP8P_d2_65.bam_summits.bed.gz"], "H3K27ac - \u03b3\u03b4 CD1- donor Th2": ["GSM4566057_macs2_ac_gd1M_d2_66.bam_summits.bed.gz"], "H3K27ac - \u03b3\u03b4 CD1+ donor Th2": ["GSM4566058_macs2_ac_gd1P_d2_67.bam_summits.bed.gz"], "H3K27ac - HPC donor CB2": ["GSM4566059_macs2_ac_CB_d2_68.bam_summits.bed.gz"], "BulkATAC Control Caudate 1": ["GSM4441680_CTRL_CAUD_00_38.optimal_peak.narrowPeak.gz", "GSM4441680_CTRL_CAUD_00_38.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 10": ["GSM4441681_CTRL_CAUD_09_35.optimal_peak.narrowPeak.gz", "GSM4441681_CTRL_CAUD_09_35.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 11": ["GSM4441682_CTRL_CAUD_15_78.optimal_peak.narrowPeak.gz", "GSM4441682_CTRL_CAUD_15_78.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 12": ["GSM4441683_CTRL_CAUD_16_10.idr.optimal_peak.narrowPeak.gz", "GSM4441683_CTRL_CAUD_16_10.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 13": ["GSM4441684_CTRL_CAUD_16_32.optimal_peak.narrowPeak.gz", "GSM4441684_CTRL_CAUD_16_32.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 14": ["GSM4441685_CTRL_CAUD_11_0393.optimal_peak.narrowPeak.gz", "GSM4441685_CTRL_CAUD_11_0393.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 15": ["GSM4441686_CTRL_CAUD_13_0038.optimal_peak.narrowPeak.gz", "GSM4441686_CTRL_CAUD_13_0038.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 16": ["GSM4441687_CTRL_CAUD_13_1226.optimal_peak.narrowPeak.gz", "GSM4441687_CTRL_CAUD_13_1226.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 17": ["GSM4441688_CTRL_CAUD_14_0586.idr.optimal_peak.narrowPeak.gz", "GSM4441688_CTRL_CAUD_14_0586.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 18": ["GSM4441689_CTRL_CAUD_14_0941.optimal_peak.narrowPeak.gz", "GSM4441689_CTRL_CAUD_14_0941.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 19": ["GSM4441690_CTRL_CAUD_14_1018.idr.optimal_peak.narrowPeak.gz", "GSM4441690_CTRL_CAUD_14_1018.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 2": ["GSM4441691_CTRL_CAUD_01_31.optimal_peak.narrowPeak.gz", "GSM4441691_CTRL_CAUD_01_31.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 20": ["GSM4441692_CTRH_CAUD_07_1144.optimal_peak.narrowPeak.gz", "GSM4441692_CTRH_CAUD_07_1144.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 21": ["GSM4441693_CTRH_CAUD_07_1287.idr.optimal_peak.narrowPeak.gz", "GSM4441693_CTRH_CAUD_07_1287.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 22": ["GSM4441694_CTRH_CAUD_08_0712.optimal_peak.narrowPeak.gz", "GSM4441694_CTRH_CAUD_08_0712.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 23": ["GSM4441695_CTRH_CAUD_10_0867.idr.optimal_peak.narrowPeak.gz", "GSM4441695_CTRH_CAUD_10_0867.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 24": ["GSM4441696_CTRH_CAUD_13_0962.idr.optimal_peak.narrowPeak.gz", "GSM4441696_CTRH_CAUD_13_0962.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 25": ["GSM4441697_CTRH_CAUD_14_0380.idr.optimal_peak.narrowPeak.gz", "GSM4441697_CTRH_CAUD_14_0380.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 26": ["GSM4441698_CTRH_CAUD_14_0513.idr.optimal_peak.narrowPeak.gz", "GSM4441698_CTRH_CAUD_14_0513.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 27": ["GSM4441699_CTRH_CAUD_14_1383.idr.optimal_peak.narrowPeak.gz", "GSM4441699_CTRH_CAUD_14_1383.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 28": ["GSM4441700_CTRH_CAUD_15_1023.optimal_peak.narrowPeak.gz", "GSM4441700_CTRH_CAUD_15_1023.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 29": ["GSM4441701_CTRH_CAUD_15_1025.optimal_peak.narrowPeak.gz", "GSM4441701_CTRH_CAUD_15_1025.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 3": ["GSM4441702_CTRL_CAUD_03_15.idr.optimal_peak.narrowPeak.gz", "GSM4441702_CTRL_CAUD_03_15.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 30": ["GSM4441703_CTRL_CAUD_06_0615.optimal_peak.narrowPeak.gz", "GSM4441703_CTRL_CAUD_06_0615.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 31": ["GSM4441704_CTRL_CAUD_06_1516.optimal_peak.narrowPeak.gz", "GSM4441704_CTRL_CAUD_06_1516.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 32": ["GSM4441705_CTRL_CAUD_09_1589.optimal_peak.narrowPeak.gz", "GSM4441705_CTRL_CAUD_09_1589.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 4": ["GSM4441706_CTRL_CAUD_03_39.idr.optimal_peak.narrowPeak.gz", "GSM4441706_CTRL_CAUD_03_39.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 5": ["GSM4441707_CTRL_CAUD_03_41.idr.optimal_peak.narrowPeak.gz", "GSM4441707_CTRL_CAUD_03_41.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 6": ["GSM4441708_CTRL_CAUD_03_66.idr.optimal_peak.narrowPeak.gz", "GSM4441708_CTRL_CAUD_03_66.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 7": ["GSM4441709_CTRL_CAUD_04_38.idr.optimal_peak.narrowPeak.gz", "GSM4441709_CTRL_CAUD_04_38.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 8": ["GSM4441710_CTRL_CAUD_05_16.idr.optimal_peak.narrowPeak.gz", "GSM4441710_CTRL_CAUD_05_16.optimal_peak.narrowPeak.gz"], "BulkATAC Control Caudate 9": ["GSM4441711_CTRL_CAUD_08_90.idr.optimal_peak.narrowPeak.gz", "GSM4441711_CTRL_CAUD_08_90.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 1": ["GSM4441712_CTRL_HIPP_00_38.idr.optimal_peak.narrowPeak.gz", "GSM4441712_CTRL_HIPP_00_38.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 10": ["GSM4441713_CTRH_HIPP_15_1023.optimal_peak.narrowPeak.gz", "GSM4441713_CTRH_HIPP_15_1023.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 11": ["GSM4441714_CTRH_HIPP_15_1025.idr.optimal_peak.narrowPeak.gz", "GSM4441714_CTRH_HIPP_15_1025.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 12": ["GSM4441715_CTRL_HIPP_06_1516.idr.optimal_peak.narrowPeak.gz", "GSM4441715_CTRL_HIPP_06_1516.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 13": ["GSM4441716_CTRL_HIPP_11_0393.idr.optimal_peak.narrowPeak.gz", "GSM4441716_CTRL_HIPP_11_0393.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 14": ["GSM4441717_CTRL_HIPP_13_0038.optimal_peak.narrowPeak.gz", "GSM4441717_CTRL_HIPP_13_0038.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 15": ["GSM4441718_CTRL_HIPP_13_1226.optimal_peak.narrowPeak.gz", "GSM4441718_CTRL_HIPP_13_1226.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 16": ["GSM4441719_CTRL_HIPP_14_0586.optimal_peak.narrowPeak.gz", "GSM4441719_CTRL_HIPP_14_0586.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 17": ["GSM4441720_CTRL_HIPP_14_0941.optimal_peak.narrowPeak.gz", "GSM4441720_CTRL_HIPP_14_0941.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 18": ["GSM4441721_CTRL_HIPP_14_1018.optimal_peak.narrowPeak.gz", "GSM4441721_CTRL_HIPP_14_1018.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 19": ["GSM4441722_CTRH_HIPP_07_1058.idr.optimal_peak.narrowPeak.gz", "GSM4441722_CTRH_HIPP_07_1058.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 2": ["GSM4441723_CTRL_HIPP_04_38.optimal_peak.narrowPeak.gz", "GSM4441723_CTRL_HIPP_04_38.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 20": ["GSM4441724_CTRH_HIPP_07_1144.idr.optimal_peak.narrowPeak.gz", "GSM4441724_CTRH_HIPP_07_1144.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 21": ["GSM4441725_CTRH_HIPP_07_1287.optimal_peak.narrowPeak.gz", "GSM4441725_CTRH_HIPP_07_1287.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 22": ["GSM4441726_CTRH_HIPP_08_0298.optimal_peak.narrowPeak.gz", "GSM4441726_CTRH_HIPP_08_0298.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 3": ["GSM4441727_CTRL_HIPP_05_16.idr.optimal_peak.narrowPeak.gz", "GSM4441727_CTRL_HIPP_05_16.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 4": ["GSM4441728_CTRL_HIPP_09_35.optimal_peak.narrowPeak.gz", "GSM4441728_CTRL_HIPP_09_35.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 5": ["GSM4441729_CTRH_HIPP_10_0867.idr.optimal_peak.narrowPeak.gz", "GSM4441729_CTRH_HIPP_10_0867.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 6": ["GSM4441730_CTRH_HIPP_13_0962.optimal_peak.narrowPeak.gz", "GSM4441730_CTRH_HIPP_13_0962.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 7": ["GSM4441731_CTRH_HIPP_14_0380.idr.optimal_peak.narrowPeak.gz", "GSM4441731_CTRH_HIPP_14_0380.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 8": ["GSM4441732_CTRH_HIPP_14_0513.optimal_peak.narrowPeak.gz", "GSM4441732_CTRH_HIPP_14_0513.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Hippocampus 9": ["GSM4441733_CTRH_HIPP_14_1383.optimal_peak.narrowPeak.gz", "GSM4441733_CTRH_HIPP_14_1383.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Frontal Gyrus 1": ["GSM4441734_CTRL_MDFG_00_38.optimal_peak.narrowPeak.gz", "GSM4441734_CTRL_MDFG_00_38.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Frontal Gyrus 10": ["GSM4441735_CTRL_MDFG_15_78.optimal_peak.narrowPeak.gz", "GSM4441735_CTRL_MDFG_15_78.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Frontal Gyrus 11": ["GSM4441736_CTRL_MDFG_16_10.idr.optimal_peak.narrowPeak.gz", "GSM4441736_CTRL_MDFG_16_10.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Frontal Gyrus 12": ["GSM4441737_CTRL_MDFG_16_32.optimal_peak.narrowPeak.gz", "GSM4441737_CTRL_MDFG_16_32.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Frontal Gyrus 2": ["GSM4441738_CTRL_MDFG_01_37.idr.optimal_peak.narrowPeak.gz", "GSM4441738_CTRL_MDFG_01_37.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Frontal Gyrus 3": ["GSM4441739_CTRL_MDFG_03_39.optimal_peak.narrowPeak.gz", "GSM4441739_CTRL_MDFG_03_39.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Frontal Gyrus 4": ["GSM4441740_CTRL_MDFG_03_41.optimal_peak.narrowPeak.gz", "GSM4441740_CTRL_MDFG_03_41.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Frontal Gyrus 5": ["GSM4441741_CTRL_MDFG_03_66.idr.optimal_peak.narrowPeak.gz", "GSM4441741_CTRL_MDFG_03_66.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Frontal Gyrus 6": ["GSM4441742_CTRL_MDFG_04_38.optimal_peak.narrowPeak.gz", "GSM4441742_CTRL_MDFG_04_38.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Frontal Gyrus 7": ["GSM4441743_CTRL_MDFG_05_16.optimal_peak.narrowPeak.gz", "GSM4441743_CTRL_MDFG_05_16.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Frontal Gyrus 8": ["GSM4441744_CTRL_MDFG_09_35.optimal_peak.narrowPeak.gz", "GSM4441744_CTRL_MDFG_09_35.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Frontal Gyrus 9": ["GSM4441745_CTRL_MDFG_09_50.idr.optimal_peak.narrowPeak.gz", "GSM4441745_CTRL_MDFG_09_50.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Temporal Gyri 1": ["GSM4441746_CTRL_MDTG_00_38.idr.optimal_peak.narrowPeak.gz", "GSM4441746_CTRL_MDTG_00_38.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Temporal Gyri 10": ["GSM4441747_CTRL_MDTG_15_78.optimal_peak.narrowPeak.gz", "GSM4441747_CTRL_MDTG_15_78.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Temporal Gyri 11": ["GSM4441748_CTRL_MDTG_16_10.optimal_peak.narrowPeak.gz", "GSM4441748_CTRL_MDTG_16_10.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Temporal Gyri 12": ["GSM4441749_CTRL_MDTG_16_32.idr.optimal_peak.narrowPeak.gz", "GSM4441749_CTRL_MDTG_16_32.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Temporal Gyri 2": ["GSM4441750_CTRL_MDTG_03_15.optimal_peak.narrowPeak.gz", "GSM4441750_CTRL_MDTG_03_15.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Temporal Gyri 3": ["GSM4441751_CTRL_MDTG_03_39.optimal_peak.narrowPeak.gz", "GSM4441751_CTRL_MDTG_03_39.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Temporal Gyri 4": ["GSM4441752_CTRL_MDTG_03_41.optimal_peak.narrowPeak.gz", "GSM4441752_CTRL_MDTG_03_41.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Temporal Gyri 5": ["GSM4441753_CTRL_MDTG_03_66.idr.optimal_peak.narrowPeak.gz", "GSM4441753_CTRL_MDTG_03_66.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Temporal Gyri 6": ["GSM4441754_CTRL_MDTG_04_38.optimal_peak.narrowPeak.gz", "GSM4441754_CTRL_MDTG_04_38.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Temporal Gyri 7": ["GSM4441755_CTRL_MDTG_05_16.optimal_peak.narrowPeak.gz", "GSM4441755_CTRL_MDTG_05_16.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Temporal Gyri 8": ["GSM4441756_CTRL_MDTG_09_35.optimal_peak.narrowPeak.gz", "GSM4441756_CTRL_MDTG_09_35.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Middle Temporal Gyri 9": ["GSM4441757_CTRL_MDTG_09_50.optimal_peak.narrowPeak.gz", "GSM4441757_CTRL_MDTG_09_50.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 1": ["GSM4441758_CTRH_PARL_07_1058.optimal_peak.narrowPeak.gz", "GSM4441758_CTRH_PARL_07_1058.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 10": ["GSM4441759_CTRH_PARL_15_1023.optimal_peak.narrowPeak.gz", "GSM4441759_CTRH_PARL_15_1023.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 11": ["GSM4441760_CTRH_PARL_15_1025.optimal_peak.narrowPeak.gz", "GSM4441760_CTRH_PARL_15_1025.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 12": ["GSM4441761_CTRL_PARL_09_1589.idr.optimal_peak.narrowPeak.gz", "GSM4441761_CTRL_PARL_09_1589.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 13": ["GSM4441762_CTRL_PARL_11_0311.idr.optimal_peak.narrowPeak.gz", "GSM4441762_CTRL_PARL_11_0311.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 14": ["GSM4441763_CTRL_PARL_11_0393.idr.optimal_peak.narrowPeak.gz", "GSM4441763_CTRL_PARL_11_0393.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 15": ["GSM4441764_CTRL_PARL_13_0038.idr.optimal_peak.narrowPeak.gz", "GSM4441764_CTRL_PARL_13_0038.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 16": ["GSM4441765_CTRL_PARL_13_1226.optimal_peak.narrowPeak.gz", "GSM4441765_CTRL_PARL_13_1226.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 17": ["GSM4441766_CTRL_PARL_14_0586.idr.optimal_peak.narrowPeak.gz", "GSM4441766_CTRL_PARL_14_0586.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 18": ["GSM4441767_CTRL_PARL_14_1018.idr.optimal_peak.narrowPeak.gz", "GSM4441767_CTRL_PARL_14_1018.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 2": ["GSM4441768_CTRH_PARL_07_1144.idr.optimal_peak.narrowPeak.gz", "GSM4441768_CTRH_PARL_07_1144.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 3": ["GSM4441769_CTRH_PARL_07_1287.idr.optimal_peak.narrowPeak.gz", "GSM4441769_CTRH_PARL_07_1287.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 4": ["GSM4441770_CTRH_PARL_08_0298.idr.optimal_peak.narrowPeak.gz", "GSM4441770_CTRH_PARL_08_0298.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 5": ["GSM4441771_CTRH_PARL_10_0867.optimal_peak.narrowPeak.gz", "GSM4441771_CTRH_PARL_10_0867.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 6": ["GSM4441772_CTRH_PARL_13_0962.optimal_peak.narrowPeak.gz", "GSM4441772_CTRH_PARL_13_0962.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 7": ["GSM4441773_CTRH_PARL_14_0380.idr.optimal_peak.narrowPeak.gz", "GSM4441773_CTRH_PARL_14_0380.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 8": ["GSM4441774_CTRH_PARL_14_0513.optimal_peak.narrowPeak.gz", "GSM4441774_CTRH_PARL_14_0513.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Parietal Lobe 9": ["GSM4441775_CTRH_PARL_14_1383.optimal_peak.narrowPeak.gz", "GSM4441775_CTRH_PARL_14_1383.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Putamen 1": ["GSM4441776_CTRL_PTMN_00_38.optimal_peak.narrowPeak.gz", "GSM4441776_CTRL_PTMN_00_38.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Putamen 10": ["GSM4441777_CTRL_PTMN_15_78.optimal_peak.narrowPeak.gz", "GSM4441777_CTRL_PTMN_15_78.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Putamen 11": ["GSM4441778_CTRL_PTMN_16_32.idr.optimal_peak.narrowPeak.gz", "GSM4441778_CTRL_PTMN_16_32.optimal_peak.narrowPeak.gz"], "BulkATAC Control Putamen 2": ["GSM4441779_CTRL_PTMN_03_39.idr.optimal_peak.narrowPeak.gz", "GSM4441779_CTRL_PTMN_03_39.optimal_peak.narrowPeak.gz"], "BulkATAC Control Putamen 3": ["GSM4441780_CTRL_PTMN_03_41.idr.optimal_peak.narrowPeak.gz", "GSM4441780_CTRL_PTMN_03_41.optimal_peak.narrowPeak.gz"], "BulkATAC Control Putamen 4": ["GSM4441781_CTRL_PTMN_03_66.idr.optimal_peak.narrowPeak.gz", "GSM4441781_CTRL_PTMN_03_66.optimal_peak.narrowPeak.gz"], "BulkATAC Control Putamen 5": ["GSM4441782_CTRL_PTMN_04_38.idr.optimal_peak.narrowPeak.gz", "GSM4441782_CTRL_PTMN_04_38.optimal_peak.narrowPeak.gz"], "BulkATAC Control Putamen 6": ["GSM4441783_CTRL_PTMN_05_16.optimal_peak.narrowPeak.gz", "GSM4441783_CTRL_PTMN_05_16.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Putamen 7": ["GSM4441784_CTRL_PTMN_07_28.optimal_peak.narrowPeak.gz", "GSM4441784_CTRL_PTMN_07_28.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Putamen 8": ["GSM4441785_CTRL_PTMN_09_35.optimal_peak.narrowPeak.gz", "GSM4441785_CTRL_PTMN_09_35.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Putamen 9": ["GSM4441786_CTRL_PTMN_09_50.idr.optimal_peak.narrowPeak.gz", "GSM4441786_CTRL_PTMN_09_50.optimal_peak.narrowPeak.gz"], "BulkATAC Control Substantia Nigra 1": ["GSM4441787_CTRL_SUNI_00_38.idr.optimal_peak.narrowPeak.gz", "GSM4441787_CTRL_SUNI_00_38.optimal_peak.narrowPeak.gz"], "BulkATAC Control Substantia Nigra 10": ["GSM4441788_CTRL_SUNI_07_28.optimal_peak.narrowPeak.gz", "GSM4441788_CTRL_SUNI_07_28.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Substantia Nigra 11": ["GSM4441789_CTRL_SUNI_09_35.optimal_peak.narrowPeak.gz", "GSM4441789_CTRL_SUNI_09_35.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Substantia Nigra 12": ["GSM4441790_CTRL_SUNI_09_50.idr.optimal_peak.narrowPeak.gz", "GSM4441790_CTRL_SUNI_09_50.optimal_peak.narrowPeak.gz"], "BulkATAC Control Substantia Nigra 13": ["GSM4441791_CTRL_SUNI_15_78.optimal_peak.narrowPeak.gz", "GSM4441791_CTRL_SUNI_15_78.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Substantia Nigra 14": ["GSM4441792_CTRL_SUNI_16_32.optimal_peak.narrowPeak.gz", "GSM4441792_CTRL_SUNI_16_32.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Substantia Nigra 2": ["GSM4441793_CTRL_SUNI_01_31.idr.optimal_peak.narrowPeak.gz", "GSM4441793_CTRL_SUNI_01_31.optimal_peak.narrowPeak.gz"], "BulkATAC Control Substantia Nigra 3": ["GSM4441794_CTRL_SUNI_03_15.optimal_peak.narrowPeak.gz", "GSM4441794_CTRL_SUNI_03_15.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Substantia Nigra 4": ["GSM4441795_CTRL_SUNI_03_39.optimal_peak.narrowPeak.gz", "GSM4441795_CTRL_SUNI_03_39.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Substantia Nigra 5": ["GSM4441796_CTRL_SUNI_03_41.optimal_peak.narrowPeak.gz", "GSM4441796_CTRL_SUNI_03_41.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Substantia Nigra 6": ["GSM4441797_CTRL_SUNI_03_66.idr.optimal_peak.narrowPeak.gz", "GSM4441797_CTRL_SUNI_03_66.optimal_peak.narrowPeak.gz"], "BulkATAC Control Substantia Nigra 7": ["GSM4441798_CTRL_SUNI_04_38.optimal_peak.narrowPeak.gz", "GSM4441798_CTRL_SUNI_04_38.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Substantia Nigra 8": ["GSM4441799_CTRL_SUNI_05_16.idr.optimal_peak.narrowPeak.gz", "GSM4441799_CTRL_SUNI_05_16.optimal_peak.narrowPeak.gz"], "BulkATAC Control Substantia Nigra 9": ["GSM4441800_CTRL_SUNI_06_57.idr.optimal_peak.narrowPeak.gz", "GSM4441800_CTRL_SUNI_06_57.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 1": ["GSM4441801_CTRH_SMTG_07_1058.idr.optimal_peak.narrowPeak.gz", "GSM4441801_CTRH_SMTG_07_1058.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 10": ["GSM4441802_CTRH_SMTG_15_1023.optimal_peak.narrowPeak.gz", "GSM4441802_CTRH_SMTG_15_1023.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 11": ["GSM4441803_CTRH_SMTG_15_1025.idr.optimal_peak.narrowPeak.gz", "GSM4441803_CTRH_SMTG_15_1025.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 12": ["GSM4441804_CTRL_SMTG_06_1516.optimal_peak.narrowPeak.gz", "GSM4441804_CTRL_SMTG_06_1516.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 13": ["GSM4441805_CTRL_SMTG_09_1589.optimal_peak.narrowPeak.gz", "GSM4441805_CTRL_SMTG_09_1589.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 14": ["GSM4441806_CTRL_SMTG_11_0311.optimal_peak.narrowPeak.gz", "GSM4441806_CTRL_SMTG_11_0311.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 15": ["GSM4441807_CTRL_SMTG_11_0393.optimal_peak.narrowPeak.gz", "GSM4441807_CTRL_SMTG_11_0393.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 16": ["GSM4441808_CTRL_SMTG_13_0038.optimal_peak.narrowPeak.gz", "GSM4441808_CTRL_SMTG_13_0038.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 17": ["GSM4441809_CTRL_SMTG_13_1226.idr.optimal_peak.narrowPeak.gz", "GSM4441809_CTRL_SMTG_13_1226.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 18": ["GSM4441810_CTRL_SMTG_14_0586.idr.optimal_peak.narrowPeak.gz", "GSM4441810_CTRL_SMTG_14_0586.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 19": ["GSM4441811_CTRL_SMTG_14_1018.optimal_peak.narrowPeak.gz", "GSM4441811_CTRL_SMTG_14_1018.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 2": ["GSM4441812_CTRH_SMTG_07_1144.idr.optimal_peak.narrowPeak.gz", "GSM4441812_CTRH_SMTG_07_1144.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 3": ["GSM4441813_CTRH_SMTG_07_1287.idr.optimal_peak.narrowPeak.gz", "GSM4441813_CTRH_SMTG_07_1287.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 4": ["GSM4441814_CTRH_SMTG_08_0712.idr.optimal_peak.narrowPeak.gz", "GSM4441814_CTRH_SMTG_08_0712.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 5": ["GSM4441815_CTRH_SMTG_10_0867.optimal_peak.narrowPeak.gz", "GSM4441815_CTRH_SMTG_10_0867.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 6": ["GSM4441816_CTRH_SMTG_13_0962.optimal_peak.narrowPeak.gz", "GSM4441816_CTRH_SMTG_13_0962.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 7": ["GSM4441817_CTRH_SMTG_14_0380.idr.optimal_peak.narrowPeak.gz", "GSM4441817_CTRH_SMTG_14_0380.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 8": ["GSM4441818_CTRH_SMTG_14_0513.optimal_peak.narrowPeak.gz", "GSM4441818_CTRH_SMTG_14_0513.idr.optimal_peak.narrowPeak.gz"], "BulkATAC Control Superior and Middle Temporal Gyri 9": ["GSM4441819_CTRH_SMTG_14_1383.idr.optimal_peak.narrowPeak.gz", "GSM4441819_CTRH_SMTG_14_1383.optimal_peak.narrowPeak.gz"], "TH137_CD34_RUNX1": ["GSM4083593_TH137_CD34_RUNX1.bed.gz"], "TH125_EC_H3K27ac": ["GSM4083594_TH125_EC_H3K27ac.bed.gz"], "TH125_EC_H3K27me3": ["GSM4083595_TH125_EC_H3K27me3.bed.gz"], "TH125_LC_H3K4me1": ["GSM4083596_TH125_LC_H3K4me1.bed.gz"], "TH125_LC_H3K27ac": ["GSM4083597_TH125_LC_H3K27ac.bed.gz"], "TH117_LC_H3K27me3": ["GSM4083598_TH117_LC_H3K27me3.bed.gz"], "TH125_LC_H3K36me3": ["GSM4083599_TH125_LC_H3K36me3.bed.gz"], "TH125_SP4_H3K27ac": ["GSM4083600_TH125_SP4_H3K27ac.bed.gz"], "TH148_CD34pos_1aneg_7pos_ATAC": ["GSM4083601_TH148_CD34pos_1aneg_7pos.bed.gz"], "TH149_CD34pos_1aneg_7pos_ATAC": ["GSM4083602_TH149_CD34pos_1aneg_7pos.bed.gz"], "TH148_CD34pos_1apos_ATAC": ["GSM4083603_TH148_CD34pos_1apos.bed.gz"], "TH149_CD34pos_1apos_ATAC": ["GSM4083604_TH149_CD34pos_1apos.bed.gz"], "TH148_EC_ATAC": ["GSM4083605_TH148_EC.bed.gz"], "TH149_EC_ATAC": ["GSM4083606_TH149_EC.bed.gz"], "TH148_LC_ATAC": ["GSM4083607_TH148_LC.bed.gz"], "TH149_LC_ATAC": ["GSM4083608_TH149_LC.bed.gz"], "Bliss 0 Gy 0 Nac Replicate 1": ["GSM4520693_REP1_0NAC_0Gy.clean.umi_dedup.aggregated.bed.gz"], "Bliss 10 Gy 0 Nac Replicate 1": ["GSM4520694_REP1_0NAC_10Gy.clean.umi_dedup.aggregated.bed.gz"], "Bliss 0 Gy 10 Nac Replicate 1": ["GSM4520695_REP1_10NAC_0Gy.clean.umi_dedup.aggregated.bed.gz"], "Bliss 10 Gy 10 Nac Replicate 1": ["GSM4520696_REP1_10NAC_10Gy.clean.umi_dedup.aggregated.bed.gz"], "Bliss 0 Gy 0 Nac Replicate 2": ["GSM4520697_REP2_0NAC_0Gy.clean.umi_dedup.aggregated.bed.gz"], "Bliss 10 Gy 0 Nac Replicate 2": ["GSM4520698_REP2_0NAC_10Gy.clean.umi_dedup.aggregated.bed.gz"], "Bliss 0 Gy 10 Nac Replicate 2": ["GSM4520699_REP2_10NAC_0Gy.clean.umi_dedup.aggregated.bed.gz"], "Bliss 10 Gy 10 Nac Replicate 2": ["GSM4520700_REP2_10NAC_10Gy.clean.umi_dedup.aggregated.bed.gz"], "Bliss 0 Gy 0 Nac Replicate 3": ["GSM4520701_REP3_0NAC_0Gy.clean.umi_dedup.aggregated.bed.gz"], "Bliss 10 Gy 0 Nac Replciate 3": ["GSM4520702_REP3_0NAC_10Gy.clean.umi_dedup.aggregated.bed.gz"], "HC_Bruseq": ["GSM4644417_HC_Bruseq.fragmentspergene.counts.bed.gz"], "DMD_Bruseq": ["GSM4644418_DMD_Bruseq.fragmentspergene.counts.bed.gz"], "Hela AdMTase-seq (0.5 U Hia5)": ["GSM4411213_DS70816_peaks_fdr05.bed.gz"], "Hela AdMTase-seq (1.0 U Hia5)": ["GSM4411214_DS70817_peaks_fdr05.bed.gz"], "K562 AdMTase-seq (0.5 U Hia5)": ["GSM4411215_DS70818_peaks_fdr05.bed.gz"], "K562 AdMTase-seq (1.0 U Hia5)": ["GSM4411216_DS70819_peaks_fdr05.bed.gz"], "K562 Fiber-seq (20 U Hia5) rep3": ["GSM4411225_DS76917_ZMW_IDs_hg38.bed.gz"], "ATAC-seq TGFb-low-dose-rep1": ["GSM4625576_01-TGFb-low-rep1_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-med-dose-rep1": ["GSM4625577_02-TGFb-med-rep1_blacklistFiltered.narrowPeak.gz"], "ATAC-seq RA-low-dose-rep1": ["GSM4625578_03-RA-low-rep1_blacklistFiltered.narrowPeak.gz"], "ATAC-seq EtOH-highDensity-dose-rep1": ["GSM4625579_04-EtOH-highDensity-rep1_blacklistFiltered.narrowPeak.gz"], "ATAC-seq EtOH-nlDensity-dose-rep1": ["GSM4625580_05-EtOH-nlDensity-rep1_blacklistFiltered.narrowPeak.gz"], "ATAC-seq RA-high-dose-rep1": ["GSM4625581_06-RA-high-rep1_blacklistFiltered.narrowPeak.gz"], "ATAC-seq EtOH-halfDensity-dose-rep1": ["GSM4625582_07-EtOH-halfDensity-rep1_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-and-RA-low-dose-rep1": ["GSM4625583_08-TGFb-and-RA-low-rep1_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-and-RA-med-dose-rep1": ["GSM4625584_09-TGFb-and-RA-med-rep1_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-high-dose-rep1": ["GSM4625585_10-TGFb-high-rep1_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-and-RA-high-dose-rep1": ["GSM4625586_11-TGFb-and-RA-high-rep1_blacklistFiltered.narrowPeak.gz"], "ATAC-seq RA-med-dose-rep1": ["GSM4625587_12-RA-med-rep1_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-and-RA-low-dose-rep2": ["GSM4625588_13-TGFb-and-RA-low-rep2_blacklistFiltered.narrowPeak.gz"], "ATAC-seq EtOH-highDensity-dose-rep2": ["GSM4625589_14-EtOH-highDensity-rep2_blacklistFiltered.narrowPeak.gz"], "ATAC-seq EtOH-nlDensity-dose-rep2": ["GSM4625590_15-EtOH-nlDensity-rep2_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-med-dose-rep2": ["GSM4625591_16-TGFb-med-rep2_blacklistFiltered.narrowPeak.gz"], "ATAC-seq RA-med-dose-rep2": ["GSM4625592_17-RA-med-rep2_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-and-RA-med-dose-rep2": ["GSM4625593_18-TGFb-and-RA-med-rep2_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-low-dose-rep2": ["GSM4625594_19-TGFb-low-rep2_blacklistFiltered.narrowPeak.gz"], "ATAC-seq EtOH-halfDensity-dose-rep2": ["GSM4625595_20-EtOH-halfDensity-rep2_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-and-RA-high-dose-rep2": ["GSM4625596_21-TGFb-and-RA-high-rep2_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-high-dose-rep2": ["GSM4625597_22-TGFb-high-rep2_blacklistFiltered.narrowPeak.gz"], "ATAC-seq RA-high-dose-rep2": ["GSM4625598_23-RA-high-rep2_blacklistFiltered.narrowPeak.gz"], "ATAC-seq RA-low-dose-rep2": ["GSM4625599_24-RA-low-rep2_blacklistFiltered.narrowPeak.gz"], "ATAC-seq EtOH-halfDensity-dose-rep3": ["GSM4625600_25-EtOH-halfDensity-rep3_blacklistFiltered.narrowPeak.gz"], "ATAC-seq RA-med-dose-rep3": ["GSM4625601_26-RA-med-rep3_blacklistFiltered.narrowPeak.gz"], "ATAC-seq EtOH-nlDensity-dose-rep3": ["GSM4625602_27-EtOH-nlDensity-rep3_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-and-RA-med-dose-rep3": ["GSM4625603_28-TGFb-and-RA-med-rep3_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-and-RA-low-dose-rep3": ["GSM4625604_29-TGFb-and-RA-low-rep3_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-med-dose-rep3": ["GSM4625605_30-TGFb-med-rep3_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-high-dose-rep3": ["GSM4625606_31-TGFb-high-rep3_blacklistFiltered.narrowPeak.gz"], "ATAC-seq RA-high-dose-rep3": ["GSM4625607_32-RA-high-rep3_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-low-dose-rep3": ["GSM4625608_33-TGFb-low-rep3_blacklistFiltered.narrowPeak.gz"], "ATAC-seq EtOH-highDensity-dose-rep3": ["GSM4625609_34-EtOH-highDensity-rep3_blacklistFiltered.narrowPeak.gz"], "ATAC-seq TGFb-and-RA-high-dose-rep3": ["GSM4625610_35-TGFb-and-RA-high-rep3_blacklistFiltered.narrowPeak.gz"], "ATAC-seq RA-low-dose-rep3": ["GSM4625611_36-RA-low-rep3_blacklistFiltered.narrowPeak.gz"], "ARID1A_ChIPSeq": ["GSM4134962_ChIPseq_3-ARID1A-mm_S3_vs7Input_MACS2_q1e_2.narrowPeak.gz"], "H3K27ac_CARM1i_1": ["GSM4623068_C1_H3K27ac.peaks.bed.gz"], "H3K4me1_CARM1i_1": ["GSM4623069_C1_H3K4me1.peaks.bed.gz"], "H3K4me3_CARM1i_1": ["GSM4623070_C1_H3K4me3.peaks.bed.gz"], "H3K27ac_CARM1i_2": ["GSM4623071_C3_H3K27ac.peaks.bed.gz"], "H3K4me1_CARM1i_2": ["GSM4623072_C3_H3K4me1.peaks.bed.gz"], "H3K4me3_CARM1i_2": ["GSM4623073_C3_H3K4me3.peaks.bed.gz"], "H3K27ac_DMSO_1": ["GSM4623074_D1_H3K27ac.peaks.bed.gz"], "H3K4me1_DMSO_1": ["GSM4623075_D1_H3K4me1.peaks.bed.gz"], "H3K4me3_DMSO_1": ["GSM4623076_D1_H3K4me3.peaks.bed.gz"], "H3K27ac_DMSO_2": ["GSM4623077_D2_H3K27ac.peaks.bed.gz"], "H3K4me1_DMSO_2": ["GSM4623078_D2_H3K4me1.peaks.bed.gz"], "H3K4me3_DMSO_2": ["GSM4623079_D2_H3K4me3.peaks.bed.gz"], "KPS_RUNX2_ChipSeq": ["GSM4591424_KRPS_MF_RUNX2_peaks.narrowPeak.gz"], "KPS_H3K27ac": ["GSM4591425_KRPS_H3K27ac.bed.gz"], "PER_RUNX2_ChipSeq": ["GSM4591427_PER2_RUNX2.narrowPeak.gz"], "PER_H3K27ac": ["GSM4591428_PER_H3K27ac.bed.gz"], "Hi-C, HaCaT Keratinocyte cells, stimulated": ["GSM4568361_OnTAD_hacat_stim_all_chr_sorted.bed.gz"], "Hi-C, HaCaT Keratinocyte cells, unstimulated": ["GSM4568362_OnTAD_hacat_unstim_all_chr_sorted.bed.gz"], "Hi-C, My-La CD8+ T lymphocyte cells": ["GSM4568363_OnTAD_myla_all_chr_sorted.bed.gz"], "HiChIP, HaCaT Keratinocyte cells, stimulated": ["GSM4568374_HaCaT_st_27ac_helen_combinedpeaks.bed.gz", "GSM4568374_HaCat_27ac_st_rep1_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568374_HaCat_27ac_st_rep1_helenpeaks.bed.gz", "GSM4568374_HaCaT_st_27ac_helen_combined_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568374_HaCat_27ac_st_rep2_helenpeaks.bed.gz", "GSM4568374_HaCat_27ac_st_rep2_helen_stringent_merged_Q0.01_WashU.bed.gz"], "HiChIP, HaCaT Keratinocyte cells, unstimulated": ["GSM4568375_HaCaT_unst_27ac_helen_combined_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568375_HaCaT_unst_27ac_helen_combinedpeaks.bed.gz", "GSM4568375_HaCat_27ac_unst_rep1_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568375_HaCat_27ac_unst_rep2_helenpeaks.bed.gz", "GSM4568375_HaCat_27ac_unst_rep2_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568375_HaCat_27ac_unst_rep1_helenpeaks.bed.gz"], "HiChIP, My-La CD8+ T lymphocyte cells": ["GSM4568376_MyLa_27ac_rep2_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568376_MyLa_27ac_rep1_helenpeaks.bed.gz", "GSM4568376_MyLa_27ac_rep2_helenpeaks.bed.gz", "GSM4568376_MyLa_27ac_helen_combined_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568376_MyLa_27ac_rep1_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568376_MyLa_27ac_helen_combinedpeaks.bed.gz"], "MOLM-13 control": ["GSM4407650_M_con_peaks.narrowPeak.gz"], "MOLM-13 A5-KD": ["GSM4407651_M_shk1_peaks.narrowPeak.gz"], "A549_AG15677_SMARCA4_rescue_ChIP": ["GSM3855723_AG15677_LN51270.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15678_SMARCA4_rescue_ChIP": ["GSM3855724_AG15678_LN51269.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15679_SMARCA4_null_ChIP": ["GSM3855725_AG15679_LN51268.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15680_SMARCA4_null_ChIP": ["GSM3855726_AG15680_LN51267.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15681_SMARCA4_rescue_ChIP": ["GSM3855727_AG15681_LN51266.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15682_SMARCA4_rescue_ChIP": ["GSM3855728_AG15682_LN51265.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15683_SMARCA4_rescue_ChIP": ["GSM3855729_AG15683_LN51264.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15684_SMARCA4_null_ChIP": ["GSM3855730_AG15684_LN51263.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15685_SMARCA4_null_ChIP": ["GSM3855731_AG15685_LN51262.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15686_SMARCA4_rescue_ChIP": ["GSM3855732_AG15686_LN51261.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15687_SMARCA4_rescue_ChIP": ["GSM3855733_AG15687_LN51260.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15688_SMARCA4_rescue_ChIP": ["GSM3855734_AG15688_LN51259.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15689_SMARCA4_null_ChIP": ["GSM3855735_AG15689_LN51258.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15690_SMARCA4_null_ChIP": ["GSM3855736_AG15690_LN51257.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15691_SMARCA4_rescue_ChIP": ["GSM3855737_AG15691_LN51256.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15692_SMARCA4_rescue_ChIP": ["GSM3855738_AG15692_LN51255.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15693_SMARCA4_rescue_ChIP": ["GSM3855739_AG15693_LN51254.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15694_SMARCA4_null_ChIP": ["GSM3855740_AG15694_LN51253.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15695_SMARCA4_null_ChIP": ["GSM3855741_AG15695_LN51252.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15720_SMARCA4_rescue_ChIP": ["GSM3855742_AG15720_LN51276.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15721_SMARCA4_rescue_ChIP": ["GSM3855743_AG15721_LN51275.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15722_SMARCA4_rescue_ChIP": ["GSM3855744_AG15722_LN51274.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15723_SMARCA4_null_ChIP": ["GSM3855745_AG15723_LN51273.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15724_SMARCA4_null_ChIP": ["GSM3855746_AG15724_LN51272.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG15725_SMARCA4_rescue_ChIP": ["GSM3855747_AG15725_LN51271.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG14257_SMARCA4_rescue_DNase": ["GSM3855758_AG14257_LN47599.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG14259_SMARCA4_rescue_DNase": ["GSM3855759_AG14259_LN47595.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG14260_SMARCA4_rescue_DNase": ["GSM3855760_AG14260_LN47593.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG14261_SMARCA4_rescue_DNase": ["GSM3855761_AG14261_LN47591.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG14262_SMARCA4_null_DNase": ["GSM3855762_AG14262_LN47589.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG14263_SMARCA4_rescue_DNase": ["GSM3855763_AG14263_LN47585.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG14316_SMARCA4_rescue_DNase": ["GSM3855764_AG14316_LN47597.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG14317_SMARCA4_null_DNase": ["GSM3855765_AG14317_LN47587.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG14318_SMARCA4_null_DNase": ["GSM3855766_AG14318_LN47583.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "A549_AG14345_SMARCA4_null_DNase": ["GSM3855767_AG14345_LN47581.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "EGFP-MKRN2 (iCLIP) Rep 1": ["GSM4048168_PureCLIP.crosslinking_sites.MKRN21.bed.gz"], "EGFP-MKRN2 (iCLIP) Rep 2": ["GSM4048169_PureCLIP.crosslinking_sites.MKRN22.bed.gz"], "EGFP-MKRN2 (iCLIP) Rep 3": ["GSM4048170_PureCLIP.crosslinking_sites.MKRN23.bed.gz"], "KBM7_H3K27ac": ["GSM4142031_KBM7_H3K27ac.narrowPeak.gz"], "KBM7_H3K4me3": ["GSM4142032_KBM7_H3K4me3.narrowPeak.gz"], "BLaER cell line, B_CTCF_ChIPseq_rep1": ["GSM4221656_CTCF0-1_peaks.narrowPeak.gz"], "BLaER cell line, B_CTCF_ChIPseq_rep2": ["GSM4221657_CTCF0-2_peaks.narrowPeak.gz"], "BLaER cell line, 24h_CTCF_ChIPseq_rep1": ["GSM4221658_CTCF24-1_peaks.narrowPeak.gz"], "BLaER cell line, 24h_CTCF_ChIPseq_rep2": ["GSM4221659_CTCF24-2_peaks.narrowPeak.gz"], "BLaER cell line, 96h_CTCF_ChIPseq_rep1": ["GSM4221660_CTCF96-1_peaks.narrowPeak.gz"], "BLaER cell line, 96h_CTCF_ChIPseq_rep2": ["GSM4221661_CTCF96-2_peaks.narrowPeak.gz"], "BLaER cell line, 168h_CTCF_ChIPseq_rep1": ["GSM4221662_CTCF168-1_peaks.narrowPeak.gz"], "BLaER cell line, 168h_CTCF_ChIPseq_rep2": ["GSM4221663_CTCF168-2_peaks.narrowPeak.gz"], "BLaER subclone, Bcell_CTCF-AID_DMSO_24h_ChIPseq": ["GSM4221664_C3_DMSO_24h_peaks.narrowPeak.gz"], "BLaER subclone, Bcell_CTCF-AID_AUX_24h_ChIPseq": ["GSM4221665_C3_AUX_24h_peaks.narrowPeak.gz"], "U2OS_M_phase_plus_Aphidicolin_replicate_1": ["GSM4498736_U2OS_M_phase_plus_Aphidicolin_replicate_1.bed.gz"], "U2OS_M_phase_plus_Aphidicolin_replicate_2": ["GSM4498737_U2OS_M_phase_plus_Aphidicolin_replicate_2.bed.gz"], "U2OS_M_phase_plus_Aphidicolin_replicate_3": ["GSM4498738_U2OS_M_phase_plus_Aphidicolin_replicate_3.bed.gz"], "HeLa_M_phase_plus_Aphidicolin": ["GSM4498744_HeLa_M_phase_plus_Aphidicolin.bed.gz"], "HBE_M_phase_plus_Aphidicolin": ["GSM4498746_HBE_M_phase_plus_Aphidicolin.bed.gz"], "U2OS_plus_Aphidicolin_WGS": ["GSM4498749_U2OS_plus_Aphidicolin_CNV.bed.gz"], "ATAC_DMSO": ["GSM3733773_AllenGROnucdmso_peaks_clean.broadPeak.gz"], "ATAC_Nutlin": ["GSM3733774_AllenGROnucnutlin_peaks_clean.broadPeak.gz"], "ATAC_NLF_1": ["GSM4110236_ATAC_NLF_rep1.narrowPeak.txt.gz"], "ATAC_NLF_2": ["GSM4110237_ATAC_NLF_rep2.narrowPeak.txt.gz"], "ATAC_NFL_OE_1": ["GSM4110238_ATAC_NLF_OE_rep1.narrowPeak.txt.gz"], "ATAC_NFL_OE_2": ["GSM4110239_ATAC_NLF_OE_rep2.narrowPeak.txt.gz"], "ATAC_Cord_d10_Rep1": ["GSM4079456_ATAC_Cord_d10_rep1.bed.gz"], "ATAC_Cord_d10_Rep2": ["GSM4079457_ATAC_Cord_d10_rep2.bed.gz"], "ATAC_Cord_d12_Rep1": ["GSM4079458_ATAC_Cord_d12_rep1.bed.gz"], "ATAC_Cord_d12_Rep2": ["GSM4079459_ATAC_Cord_d12_rep2.bed.gz"], "ATAC_Cord_d16_Rep1": ["GSM4079460_ATAC_Cord_d16_rep1.bed.gz"], "ATAC_Cord_d16_Rep2": ["GSM4079461_ATAC_Cord_d16_rep2.bed.gz"], "ATAC_Cord_d8_Rep1": ["GSM4079462_ATAC_Cord_d8_rep1.bed.gz"], "H1hESC_ChIP_GATA3_6h_Rep1": ["GSM3999734_H1hESC_GATA3_6h_ChIP_rep1_peaks.bed.gz"], "H1hESC_ChIP_GATA3_6h_Rep2": ["GSM3999736_H1hESC_GATA3_6h_ChIP_rep2_peaks.bed.gz"], "Input_Replicate1": ["GSM4396389_Input1ug_S1.depth.bed.gz"], "NMG_Replicate1": ["GSM4396390_NMG_S2.depth.bed.gz"], "TENT4A_Replicate1": ["GSM4396391_TENT4A_S3.depth.bed.gz"], "TENT4B_Replicate1": ["GSM4396392_TENT4B_S4.depth.bed.gz"], "NMG_Replicate2": ["GSM4396393_NMG_2nd.depth.bed.gz"], "TENT4B_Replicate2": ["GSM4396394_TENT4B_2nd.depth.bed.gz"], "Cardiff_CTL33n1_83_C_1": ["GSM4289305_MACS2_callpeak_on_data_170_and_data_132_broad_Peaks.bed.gz"], "Cardiff_CTL28n6_14_C_1": ["GSM4289307_MACS2_callpeak_on_data_170_and_data_134_broad_Peaks.bed.gz"], "Cardiff_CTL28n6_14_C_2": ["GSM4289308_MACS2_callpeak_on_data_170_and_data_136_broad_Peaks.bed.gz"], "Cardiff_CTL18n6_25_C_2": ["GSM4289309_MACS2_callpeak_on_data_170_and_data_138_broad_Peaks.bed.gz"], "Cardiff_CTL33n1_83_C_2": ["GSM4289310_MACS2_callpeak_on_data_170_and_data_140_broad_Peaks.bed.gz"], "Cardiff_CTL28n6_14_C_3": ["GSM4289311_MACS2_callpeak_on_data_170_and_data_142_broad_Peaks.bed.gz"], "Cardiff_CTL18n6_25_C_3": ["GSM4289312_MACS2_callpeak_on_data_170_and_data_144_broad_Peaks.bed.gz"], "Cardiff_CTL18n2_25_C_2": ["GSM4289313_MACS2_callpeak_on_data_170_and_data_146_broad_Peaks.bed.gz"], "Cardiff_CTL33n1_83_C_3": ["GSM4289314_MACS2_callpeak_on_data_170_and_data_148_broad_Peaks.bed.gz"], "Cardiff_CTL18n2_25_C_3": ["GSM4289315_MACS2_callpeak_on_data_170_and_data_150_broad_Peaks.bed.gz"], "Cardiff_HD53n3_03_C_1": ["GSM4289316_MACS2_callpeak_on_data_170_and_data_154_broad_Peaks.bed.gz"], "Cardiff_HD53n3_03_C_2": ["GSM4289317_MACS2_callpeak_on_data_170_and_data_156_broad_Peaks.bed.gz"], "Cardiff_HD53n3_03_C_3": ["GSM4289318_MACS2_callpeak_on_data_170_and_data_158_broad_Peaks.bed.gz"], "Cardiff_HD46n10_04_C_2": ["GSM4289319_MACS2_callpeak_on_data_170_and_data_160_broad_Peaks.bed.gz"], "Cardiff_HD53n3_03_C_4": ["GSM4289320_MACS2_callpeak_on_data_170_and_data_162_broad_Peaks.bed.gz"], "Cardiff_HD53n3_03_C_5": ["GSM4289321_MACS2_callpeak_on_data_170_and_data_164_broad_Peaks.bed.gz"], "Cardiff_HD46n10_04_C_3": ["GSM4289322_MACS2_callpeak_on_data_170_and_data_166_broad_Peaks.bed.gz"], "Cardiff_HD53n3_03_A_2": ["GSM4289908_03iHD53n3_ATAC_MSN_rep1.fastq.bed.gz"], "Cardiff_HD53n3_03_A_3": ["GSM4289909_03iHD53n3_ATAC_MSN_rep2.fastq.bed.gz"], "Cardiff_HD46n10_04_A_2": ["GSM4289910_04iHD46n10_ATAC_MSN_rep1.fastq.bed.gz"], "Cardiff_HD46n10_04_A_3": ["GSM4289911_04iHD46n10_ATAC_MSN_rep2.fastq.bed.gz"], "Cardiff_CTL28n6_14_A_2": ["GSM4289912_14iCTR28n6_ATAC_MSN_rep1.fastq.bed.gz"], "Cardiff_CTL28n6_14_A_3": ["GSM4289913_14iCTR28n6_ATAC_MSN_rep2.fastq.bed.gz"], "Cardiff_CTL18n2_25_A_2": ["GSM4289914_25iCTR18n2_ATAC_MSN_rep1.fastq.bed.gz"], "Cardiff_CTL18n2_25_A_3": ["GSM4289915_25iCTR18n2_ATAC_MSN_rep2.fastq.bed.gz"], "Cardiff_CTL18n6_25_A_2": ["GSM4289916_25iCTR18n6_ATAC_MSN_rep1.fastq.bed.gz"], "Cardiff_CTL18n6_25_A_3": ["GSM4289917_25iCTR18n6_ATAC_MSN_rep2.fastq.bed.gz"], "Cardiff_CTL33n1_83_A_2": ["GSM4289918_83iCTR33n1_ATAC_MSN_rep1.fastq.bed.gz"], "Cardiff_CTL33n1_83_A_3": ["GSM4289919_83iCTR33n1_ATAC_MSN_rep2.fastq.bed.gz"], "TGF_beta_1_K27ac": ["GSM4310184_TGF_beta_1_K27ac_peaks.bed.gz"], "TGF_beta_1_K9ac": ["GSM4310185_TGF_beta_1_K9ac_peaks.bed.gz"], "TGF_beta_2_K27ac": ["GSM4310186_TGF_beta_2_K27ac_peaks.bed.gz"], "TGF_beta_2_K9ac": ["GSM4310187_TGF_beta_2_K9ac_peaks.bed.gz"], "Vehicle_1_K27ac": ["GSM4310189_Vehicle_1_K27ac_peaks.bed.gz"], "Vehicle_1_K9ac": ["GSM4310190_Vehicle_1_K9ac_peaks.bed.gz"], "Vehicle_2_K27ac": ["GSM4310191_Vehicle_2_K27ac_peaks.bed.gz"], "Vehicle_2_K9_ac": ["GSM4310192_Vehicle_2_K9ac_peaks.bed.gz"], "H69_4Vehicle_3_SMAD3": ["GSM4310194_H69_4Vehicle_3_SMAD3_peaks.bed.gz"], "H69_5Vehicle_3_SMAD3": ["GSM4310195_H69_5Vehicle_3_SMAD3_peaks.bed.gz"], "H69_4TGF_beta_3_SMAD3": ["GSM4310197_H69_4TGF_beta_3_SMAD3_peaks.bed.gz"], "H69_5TGF_beta_3_SMAD3": ["GSM4310198_H69_5TGF_beta_3_SMAD3_peaks.bed.gz"], "DMSO_Vehicle_1": ["GSM4310201_DMSO_Vehicle_1_peaks.bed.gz"], "DMSO_TGF_beta_1": ["GSM4310202_DMSO_TGF_beta_1_peaks.bed.gz"], "CPTH6_Vehicle_1": ["GSM4310203_CPTH6_Vehicle_1_peaks.bed.gz"], "CPTH6_TGF_beta_1": ["GSM4310204_CPTH6_TGF_beta_1_peaks.bed.gz"], "DMSO_Vehicle_2": ["GSM4310205_DMSO_Vehicle_2_peaks.bed.gz"], "DMSO_TGF_beta_2": ["GSM4310206_DMSO_TGF_beta_2_peaks.bed.gz"], "CPTH6_Vehicle_2": ["GSM4310207_CPTH6_Vehicle_2_peaks.bed.gz"], "CPTH6_TGF_beta_2": ["GSM4310208_CPTH6_TGF_beta_2_peaks.bed.gz"], "DMSO_Vehicle_3": ["GSM4310209_DMSO_Vehicle_3_peaks.bed.gz"], "DMSO_TGF_beta_3": ["GSM4310210_DMSO_TGF_beta_3_peaks.bed.gz"], "CPTH6_Vehicle_3": ["GSM4310211_CPTH6_Vehicle_3_peaks.bed.gz"], "CPTH6_TGF_beta_3": ["GSM4310212_CPTH6_TGF_beta_3_peaks.bed.gz"], "MKL-1 Control-1": ["GSM4172934_Control-1.bed.gz"], "MKL-1 Control-2": ["GSM4172935_Control-2.bed.gz"], "MKL-1 LSD1i-1": ["GSM4172936_LSD1i-1.bed.gz"], "MKL-1 LSD1i-2": ["GSM4172937_LSD1i-2.bed.gz"], "MKL-1 dBRD9-1": ["GSM4172938_dBRD9-1.bed.gz"], "MKL-1 dBRD9-2": ["GSM4172939_dBRD9-2.bed.gz"], "MKL-1 Combo-1": ["GSM4172940_Combo-1.bed.gz"], "MKL-1 Combo-2": ["GSM4172941_Combo-2.bed.gz"], "96h DMSO activated CD3+ rep 1": ["GSM4210409_CD3.T.cells_DMSO_1.narrowPeak.gz"], "96h DMSO activated CD3+ rep 2": ["GSM4210410_CD3.T.cells_DMSO_2.narrowPeak.gz"], "96h DMSO activated CD3+ rep 3": ["GSM4210411_CD3.T.cells_DMSO_3.narrowPeak.gz"], "96h PF-9927 activated CD3+ rep 1": ["GSM4210412_CD3.T.cells_9927_1.narrowPeak.gz"], "96h PF-9927 activated CD3+ rep 2": ["GSM4210413_CD3.T.cells_9927_2.narrowPeak.gz"], "96h PF-9927 activated CD3+ rep 3": ["GSM4210414_CD3.T.cells_9927_3.narrowPeak.gz"], "METTL3_Control_MeRIP_r1 [HEC-1-A: MeRIP]": ["GSM4174099_METTL3_Control_MeRIP_r1_peaks.narrowPeak.gz"], "METTL3_Control_MeRIP_r2 [HEC-1-A: MeRIP]": ["GSM4174100_METTL3_Control_MeRIP_r2_peaks.narrowPeak.gz"], "METTL3_KD_MeRIP_r1 [HEC-1-A: MeRIP]": ["GSM4174101_METTL3_KD_MeRIP_r1_peaks.narrowPeak.gz"], "METTL3_KD_MeRIP_r2 [HEC-1-A: MeRIP]": ["GSM4174102_METTL3_KD_MeRIP_r2_peaks.narrowPeak.gz"], "001_neuronal_371_2242.1_hSS": ["GSM3896901_001_neuronal_371_2242.1_hSS.narrowPeak.gz"], "002_neuronal_371_8858.1_hCS": ["GSM3896902_002_neuronal_371_8858.1_hCS.narrowPeak.gz"], "003_neuronal_371_8858.1_hSS": ["GSM3896903_003_neuronal_371_8858.1_hSS.narrowPeak.gz"], "004_neuronal_79_2242.1_hSS": ["GSM3896904_004_neuronal_79_2242.1_hSS.narrowPeak.gz"], "005_neuronal_79_8858.1_hCS": 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["GSM4103944_iPS_pR_young_satellite_2.bed.gz"], "iPS_pR_old_Subtel_9p+Xq": ["GSM4103945_iPS_pR_old_Subtel_9p+Xq.bed.gz"], "iPS_pR_old_Subtel_7q": ["GSM4103946_iPS_pR_old_Subtel_7q.bed.gz"], "iPS_pR_old_Subtel_5p": ["GSM4103947_iPS_pR_old_Subtel_5p.bed.gz"], "iPS_pR_old_Subtel_4p": ["GSM4103948_iPS_pR_old_Subtel_4p.bed.gz"], "iPS_pR_old_Subtel_2q+4q+10q": ["GSM4103949_iPS_pR_old_Subtel_2q+4q+10q.bed.gz"], "iPS_pR_old_Subtel_2p": ["GSM4103950_iPS_pR_old_Subtel_2p.bed.gz"], "iPS_pR_old_Subtel_10qMulti": ["GSM4103951_iPS_pR_old_Subtel_10qMulti.bed.gz"], "iPS_pR_old_Subtel_10p+18p": ["GSM4103952_iPS_pR_old_Subtel_10p+18p.bed.gz"], "iPS_pG_Subtel_9p+Xq": ["GSM4103953_iPS_pG_Subtel_9p+Xq.bed.gz"], "iPS_pG_Subtel_7q": ["GSM4103954_iPS_pG_Subtel_7q.bed.gz"], "iPS_pG_Subtel_5p": ["GSM4103955_iPS_pG_Subtel_5p.bed.gz"], "iPS_pG_Subtel_4p": ["GSM4103956_iPS_pG_Subtel_4p.bed.gz"], "iPS_pG_Subtel_2q+4q+10q": ["GSM4103957_iPS_pG_Subtel_2q+4q+10q.bed.gz"], "iPS_pG_Subtel_2p": ["GSM4103958_iPS_pG_Subtel_2p.bed.gz"], "iPS_pG_Subtel_10qMulti": ["GSM4103959_iPS_pG_Subtel_10qMulti.bed.gz"], "iPS_pG_Subtel_10p+18p": ["GSM4103960_iPS_pG_Subtel_10p+18p.bed.gz"], "iPS_pG_satellite_2": ["GSM4103961_iPS_pG_satellite_2.bed.gz"], "iPS_cR7_+54p_Subtel_9p+Xq": ["GSM4103962_iPS_cR7_+54p_Subtel_9p+Xq.bed.gz"], "iPS_cR7_+54p_Subtel_7q": ["GSM4103963_iPS_cR7_+54p_Subtel_7q.bed.gz"], "iPS_cR7_+54p_Subtel_5p": ["GSM4103964_iPS_cR7_+54p_Subtel_5p.bed.gz"], "iPS_cR7_+54p_Subtel_4p": ["GSM4103965_iPS_cR7_+54p_Subtel_4p.bed.gz"], "iPS_cR7_+54p_Subtel_2q+4q+10q": ["GSM4103966_iPS_cR7_+54p_Subtel_2q+4q+10q.bed.gz"], "iPS_cR7_+54p_Subtel_2p": ["GSM4103967_iPS_cR7_+54p_Subtel_2p.bed.gz"], "iPS_cR7_+54p_Subtel_10qMulti": ["GSM4103968_iPS_cR7_+54p_Subtel_10qMulti.bed.gz"], "iPS_cR7_+54p_Subtel_10p+18p": ["GSM4103969_iPS_cR7_+54p_Subtel_10p+18p.bed.gz"], "iPS_cR7_+3p_Subtel_9p+Xq": ["GSM4103970_iPS_cR7_+3p_Subtel_9p+Xq.bed.gz"], "iPS_cR7_+3p_Subtel_7q": ["GSM4103971_iPS_cR7_+3p_Subtel_7q.bed.gz"], "iPS_cR7_+3p_Subtel_5p": ["GSM4103972_iPS_cR7_+3p_Subtel_5p.bed.gz"], "iPS_cR7_+3p_Subtel_4p": ["GSM4103973_iPS_cR7_+3p_Subtel_4p.bed.gz"], "iPS_cR7_+3p_Subtel_2q+4q+10q": ["GSM4103974_iPS_cR7_+3p_Subtel_2q+4q+10q.bed.gz"], "iPS_cR7_+3p_Subtel_2p": ["GSM4103975_iPS_cR7_+3p_Subtel_2p.bed.gz"], "iPS_cR7_+3p_Subtel_10qMulti": ["GSM4103976_iPS_cR7_+3p_Subtel_10qMulti.bed.gz"], "iPS_cR7_+3p_Subtel_10p+18p": ["GSM4103977_iPS_cR7_+3p_Subtel_10p+18p.bed.gz"], "iPS_cR7_+3p_satellite_2": ["GSM4103978_iPS_cR7_+3p_satellite_2.bed.gz"], "iPS_cR7_+23p_Subtel_9p+Xq": ["GSM4103979_iPS_cR7_+23p_Subtel_9p+Xq.bed.gz"], "iPS_cR7_+23p_Subtel_7q": ["GSM4103980_iPS_cR7_+23p_Subtel_7q.bed.gz"], "iPS_cR7_+23p_Subtel_5p": ["GSM4103981_iPS_cR7_+23p_Subtel_5p.bed.gz"], "iPS_cR7_+23p_Subtel_4p": ["GSM4103982_iPS_cR7_+23p_Subtel_4p.bed.gz"], "iPS_cR7_+23p_Subtel_2q+4q+10q": ["GSM4103983_iPS_cR7_+23p_Subtel_2q+4q+10q.bed.gz"], "iPS_cR7_+23p_Subtel_2p": ["GSM4103984_iPS_cR7_+23p_Subtel_2p.bed.gz"], "iPS_cR7_+23p_Subtel_10qMulti": ["GSM4103985_iPS_cR7_+23p_Subtel_10qMulti.bed.gz"], "iPS_cR7_+23p_Subtel_10p+18p": ["GSM4103986_iPS_cR7_+23p_Subtel_10p+18p.bed.gz"], "iPS_cR7_+23p_satellite_2": ["GSM4103987_iPS_cR7_+23p_satellite_2.bed.gz"], "iPS_cR35_+44p_Subtel_9p+Xq": ["GSM4103988_iPS_cR35_+44p_Subtel_9p+Xq.bed.gz"], "iPS_cR35_+44p_Subtel_7q": ["GSM4103989_iPS_cR35_+44p_Subtel_7q.bed.gz"], "iPS_cR35_+44p_Subtel_5p": ["GSM4103990_iPS_cR35_+44p_Subtel_5p.bed.gz"], "iPS_cR35_+44p_Subtel_4p": ["GSM4103991_iPS_cR35_+44p_Subtel_4p.bed.gz"], "iPS_cR35_+44p_Subtel_2q+4q+10q": ["GSM4103992_iPS_cR35_+44p_Subtel_2q+4q+10q.bed.gz"], "iPS_cR35_+44p_Subtel_2p": ["GSM4103993_iPS_cR35_+44p_Subtel_2p.bed.gz"], "iPS_cR35_+44p_Subtel_10qMulti": ["GSM4103994_iPS_cR35_+44p_Subtel_10qMulti.bed.gz"], "iPS_cR35_+44p_Subtel_10p+18p": ["GSM4103995_iPS_cR35_+44p_Subtel_10p+18p.bed.gz"], "iPS_cR35_+3p_Subtel_9p+Xq": ["GSM4103996_iPS_cR35_+3p_Subtel_9p+Xq.bed.gz"], "iPS_cR35_+3p_Subtel_7q": ["GSM4103997_iPS_cR35_+3p_Subtel_7q.bed.gz"], "iPS_cR35_+3p_Subtel_5p": ["GSM4103998_iPS_cR35_+3p_Subtel_5p.bed.gz"], "iPS_cR35_+3p_Subtel_4p": ["GSM4103999_iPS_cR35_+3p_Subtel_4p.bed.gz"], "iPS_cR35_+3p_Subtel_2q+4q+10q": ["GSM4104000_iPS_cR35_+3p_Subtel_2q+4q+10q.bed.gz"], "iPS_cR35_+3p_Subtel_2p": ["GSM4104001_iPS_cR35_+3p_Subtel_2p.bed.gz"], "iPS_cR35_+3p_Subtel_10qMulti": ["GSM4104002_iPS_cR35_+3p_Subtel_10qMulti.bed.gz"], "iPS_cR35_+3p_Subtel_10p+18p": ["GSM4104003_iPS_cR35_+3p_Subtel_10p+18p.bed.gz"], "iPS_cR35_+3p_satellite_2": ["GSM4104004_iPS_cR35_+3p_satellite_2.bed.gz"], "iPS_cR35_+23p_Subtel_9p+Xq": ["GSM4104005_iPS_cR35_+23p_Subtel_9p+Xq.bed.gz"], "iPS_cR35_+23p_Subtel_7q": ["GSM4104006_iPS_cR35_+23p_Subtel_7q.bed.gz"], "iPS_cR35_+23p_Subtel_5p": ["GSM4104007_iPS_cR35_+23p_Subtel_5p.bed.gz"], "iPS_cR35_+23p_Subtel_4p": ["GSM4104008_iPS_cR35_+23p_Subtel_4p.bed.gz"], "iPS_cR35_+23p_Subtel_2q+4q+10q": ["GSM4104009_iPS_cR35_+23p_Subtel_2q+4q+10q.bed.gz"], "iPS_cR35_+23p_Subtel_2p": ["GSM4104010_iPS_cR35_+23p_Subtel_2p.bed.gz"], "iPS_cR35_+23p_Subtel_10qMulti": ["GSM4104011_iPS_cR35_+23p_Subtel_10qMulti.bed.gz"], "iPS_cR35_+23p_Subtel_10p+18p": ["GSM4104012_iPS_cR35_+23p_Subtel_10p+18p.bed.gz"], "iPS_cR35_+23p_satellite_2": ["GSM4104013_iPS_cR35_+23p_satellite_2.bed.gz"], "iPS_cG50_+3p_Subtel_9p+Xq": ["GSM4104014_iPS_cG50_+3p_Subtel_9p+Xq.bed.gz"], "iPS_cG50_+3p_Subtel_7q": ["GSM4104015_iPS_cG50_+3p_Subtel_7q.bed.gz"], "iPS_cG50_+3p_Subtel_5p": ["GSM4104016_iPS_cG50_+3p_Subtel_5p.bed.gz"], "iPS_cG50_+3p_Subtel_4p": ["GSM4104017_iPS_cG50_+3p_Subtel_4p.bed.gz"], "iPS_cG50_+3p_Subtel_2q+4q+10q": ["GSM4104018_iPS_cG50_+3p_Subtel_2q+4q+10q.bed.gz"], "iPS_cG50_+3p_Subtel_2p": ["GSM4104019_iPS_cG50_+3p_Subtel_2p.bed.gz"], "iPS_cG50_+3p_Subtel_10qMulti": ["GSM4104020_iPS_cG50_+3p_Subtel_10qMulti.bed.gz"], "iPS_cG50_+3p_Subtel_10p+18p": ["GSM4104021_iPS_cG50_+3p_Subtel_10p+18p.bed.gz"], "iPS_cG50_+3p_satellite_2": ["GSM4104022_iPS_cG50_+3p_satellite_2.bed.gz"], "iPS_cG50_+23p_Subtel_9p+Xq": ["GSM4104023_iPS_cG50_+23p_Subtel_9p+Xq.bed.gz"], "iPS_cG50_+23p_Subtel_7q": ["GSM4104024_iPS_cG50_+23p_Subtel_7q.bed.gz"], "iPS_cG50_+23p_Subtel_5p": ["GSM4104025_iPS_cG50_+23p_Subtel_5p.bed.gz"], "iPS_cG50_+23p_Subtel_4p": ["GSM4104026_iPS_cG50_+23p_Subtel_4p.bed.gz"], "iPS_cG50_+23p_Subtel_2q+4q+10q": ["GSM4104027_iPS_cG50_+23p_Subtel_2q+4q+10q.bed.gz"], "iPS_cG50_+23p_Subtel_10qMulti": ["GSM4104028_iPS_cG50_+23p_Subtel_10qMulti.bed.gz"], "iPS_cG50_+23p_Subtel_10p+18p": ["GSM4104029_iPS_cG50_+23p_Subtel_10p+18p.bed.gz"], "iPS_cG50_+23p_satellite_2": ["GSM4104030_iPS_cG50_+23p_satellite_2.bed.gz"], "iPS_cG50_+23p_Subtel_2p": ["GSM4104031_iPS_cG50_+23p_Subtel_2p.bed.gz"], "iPS_cG13_+3p_Subtel_9p+Xq": ["GSM4104032_iPS_cG13_+3p_Subtel_9p+Xq.bed.gz"], "iPS_cG13_+3p_Subtel_7q": ["GSM4104033_iPS_cG13_+3p_Subtel_7q.bed.gz"], "iPS_cG13_+3p_Subtel_5p": ["GSM4104034_iPS_cG13_+3p_Subtel_5p.bed.gz"], "iPS_cG13_+3p_Subtel_4p": ["GSM4104035_iPS_cG13_+3p_Subtel_4p.bed.gz"], "iPS_cG13_+3p_Subtel_2q+4q+10q": ["GSM4104036_iPS_cG13_+3p_Subtel_2q+4q+10q.bed.gz"], "iPS_cG13_+3p_Subtel_2p": ["GSM4104037_iPS_cG13_+3p_Subtel_2p.bed.gz"], "iPS_cG13_+3p_Subtel_10qMulti": ["GSM4104038_iPS_cG13_+3p_Subtel_10qMulti.bed.gz"], "iPS_cG13_+3p_Subtel_10p+18p": ["GSM4104039_iPS_cG13_+3p_Subtel_10p+18p.bed.gz"], "iPS_cG13_+3p_satellite_2": ["GSM4104040_iPS_cG13_+3p_satellite_2.bed.gz"], "iPS_cG13_+23p_Subtel_9p+Xq": ["GSM4104041_iPS_cG13_+23p_Subtel_9p+Xq.bed.gz"], "iPS_cG13_+23p_Subtel_7q": ["GSM4104042_iPS_cG13_+23p_Subtel_7q.bed.gz"], "iPS_cG13_+23p_Subtel_5p": ["GSM4104043_iPS_cG13_+23p_Subtel_5p.bed.gz"], "iPS_cG13_+23p_Subtel_4p": ["GSM4104044_iPS_cG13_+23p_Subtel_4p.bed.gz"], "iPS_cG13_+23p_Subtel_2q+4q+10q": ["GSM4104045_iPS_cG13_+23p_Subtel_2q+4q+10q.bed.gz"], "iPS_cG13_+23p_Subtel_2p": ["GSM4104046_iPS_cG13_+23p_Subtel_2p.bed.gz"], "iPS_cG13_+23p_Subtel_10qMulti": ["GSM4104047_iPS_cG13_+23p_Subtel_10qMulti.bed.gz"], "iPS_cG13_+23p_Subtel_10p+18p": ["GSM4104048_iPS_cG13_+23p_Subtel_10p+18p.bed.gz"], "iPS_cG13_+23p_satellite_2": ["GSM4104049_iPS_cG13_+23p_satellite_2.bed.gz"], "FL_UN_Subtel_9p+Xq": ["GSM4104050_FL_UN_Subtel_9p+Xq.bed.gz"], "FL_UN_Subtel_7q": ["GSM4104051_FL_UN_Subtel_7q.bed.gz"], "FL_UN_Subtel_5p": ["GSM4104052_FL_UN_Subtel_5p.bed.gz"], "FL_UN_Subtel_4p": ["GSM4104053_FL_UN_Subtel_4p.bed.gz"], "FL_UN_Subtel_2q+4q+10q": ["GSM4104054_FL_UN_Subtel_2q+4q+10q.bed.gz"], "FL_UN_Subtel_2p": ["GSM4104055_FL_UN_Subtel_2p.bed.gz"], "FL_UN_Subtel_10qMulti": ["GSM4104056_FL_UN_Subtel_10qMulti.bed.gz"], "FL_UN_Subtel_10p+18p": ["GSM4104057_FL_UN_Subtel_10p+18p.bed.gz"], "FL_pR_Subtel_9p+Xq": ["GSM4104058_FL_pR_Subtel_9p+Xq.bed.gz"], "FL_pR_Subtel_7q": ["GSM4104059_FL_pR_Subtel_7q.bed.gz"], "FL_pR_Subtel_5p": ["GSM4104060_FL_pR_Subtel_5p.bed.gz"], "FL_pR_Subtel_4p": ["GSM4104061_FL_pR_Subtel_4p.bed.gz"], "FL_pR_Subtel_2q+4q+10q": ["GSM4104062_FL_pR_Subtel_2q+4q+10q.bed.gz"], "FL_pR_Subtel_2p": ["GSM4104063_FL_pR_Subtel_2p.bed.gz"], "FL_pR_Subtel_10qMulti": ["GSM4104064_FL_pR_Subtel_10qMulti.bed.gz"], "FL_pR_Subtel_10p+18p": ["GSM4104065_FL_pR_Subtel_10p+18p.bed.gz"], "FL_cR7_Subtel_9p+Xq": ["GSM4104066_FL_cR7_Subtel_9p+Xq.bed.gz"], "FL_cR7_Subtel_7q": ["GSM4104067_FL_cR7_Subtel_7q.bed.gz"], "FL_cR7_Subtel_5p": ["GSM4104068_FL_cR7_Subtel_5p.bed.gz"], "FL_cR7_Subtel_4p": ["GSM4104069_FL_cR7_Subtel_4p.bed.gz"], "FL_cR7_Subtel_2q+4q+10q": ["GSM4104070_FL_cR7_Subtel_2q+4q+10q.bed.gz"], "FL_cR7_Subtel_2p": ["GSM4104071_FL_cR7_Subtel_2p.bed.gz"], "FL_cR7_Subtel_10qMulti": ["GSM4104072_FL_cR7_Subtel_10qMulti.bed.gz"], "FL_cR7_Subtel_10p+18p": ["GSM4104073_FL_cR7_Subtel_10p+18p.bed.gz"], "FL_cR35_Subtel_9p+Xq": ["GSM4104074_FL_cR35_Subtel_9p+Xq.bed.gz"], "FL_cR35_Subtel_7q": ["GSM4104075_FL_cR35_Subtel_7q.bed.gz"], "FL_cR35_Subtel_5p": ["GSM4104076_FL_cR35_Subtel_5p.bed.gz"], "FL_cR35_Subtel_4p": ["GSM4104077_FL_cR35_Subtel_4p.bed.gz"], "FL_cR35_Subtel_2q+4q+10q": ["GSM4104078_FL_cR35_Subtel_2q+4q+10q.bed.gz"], "FL_cR35_Subtel_2p": ["GSM4104079_FL_cR35_Subtel_2p.bed.gz"], "FL_cR35_Subtel_10qMulti": ["GSM4104080_FL_cR35_Subtel_10qMulti.bed.gz"], "FL_cR35_Subtel_10p+18p": ["GSM4104081_FL_cR35_Subtel_10p+18p.bed.gz"], "Fibroblast_pR_Subtel_9p+Xq": ["GSM4104082_Fibroblast_pR_Subtel_9p+Xq.bed.gz"], "Fibroblast_pR_Subtel_7q": ["GSM4104083_Fibroblast_pR_Subtel_7q.bed.gz"], "Fibroblast_pR_Subtel_5p": ["GSM4104084_Fibroblast_pR_Subtel_5p.bed.gz"], "Fibroblast_pR_Subtel_4p": ["GSM4104085_Fibroblast_pR_Subtel_4p.bed.gz"], "Fibroblast_pR_Subtel_2p": ["GSM4104086_Fibroblast_pR_Subtel_2p.bed.gz"], "Fibroblast_pR_Subtel_10p+18p": ["GSM4104087_Fibroblast_pR_Subtel_10p+18p.bed.gz"], "Fibroblast_pG_Subtel_9p+Xq": ["GSM4104088_Fibroblast_pG_Subtel_9p+Xq.bed.gz"], "Fibroblast_pG_Subtel_7q": ["GSM4104089_Fibroblast_pG_Subtel_7q.bed.gz"], "Fibroblast_pG_Subtel_5p": ["GSM4104090_Fibroblast_pG_Subtel_5p.bed.gz"], "Fibroblast_pG_Subtel_4p": ["GSM4104091_Fibroblast_pG_Subtel_4p.bed.gz"], "Fibroblast_pG_Subtel_10p+18p": ["GSM4104092_Fibroblast_pG_Subtel_10p+18p.bed.gz"], "Fibroblast_pG_Subtel_2p": ["GSM4104093_Fibroblast_pG_Subtel_2p.bed.gz"], "pG-untreat_Subtel_9p+Xq_OICR": ["GSM4104094_pG-untreat_Subtel_9p+Xq_OICR.bed.gz"], "pG-untreat_Subtel_7q_OICR": ["GSM4104095_pG-untreat_Subtel_7q_OICR.bed.gz"], "pG-untreat_Subtel_5p_OICR": ["GSM4104096_pG-untreat_Subtel_5p_OICR.bed.gz"], "pG-untreat_Subtel_4p_OICR": ["GSM4104097_pG-untreat_Subtel_4p_OICR.bed.gz"], "pG-untreat_Subtel_2p_OICR": ["GSM4104098_pG-untreat_Subtel_2p_OICR.bed.gz"], "pG-untreat_Subtel_10q_2q+4q_OICR": ["GSM4104099_pG-untreat_Subtel_10q_2q+4q_OICR.bed.gz"], "pG-untreat_Subtel_10p+18p_OICR": ["GSM4104100_pG-untreat_Subtel_10p+18p_OICR.bed.gz"], "pG-treat_Subtel_9p+Xq_OICR": ["GSM4104101_pG-treat_Subtel_9p+Xq_OICR.bed.gz"], "pG-treat_Subtel_7q_OICR": ["GSM4104102_pG-treat_Subtel_7q_OICR.bed.gz"], "pG-treat_Subtel_5p_OICR": ["GSM4104103_pG-treat_Subtel_5p_OICR.bed.gz"], "pG-treat_Subtel_4p_OICR": ["GSM4104104_pG-treat_Subtel_4p_OICR.bed.gz"], "pG-treat_Subtel_2p_OICR": ["GSM4104105_pG-treat_Subtel_2p_OICR.bed.gz"], "pG-treat_Subtel_10q_2q+4q_OICR": ["GSM4104106_pG-treat_Subtel_10q_2q+4q_OICR.bed.gz"], "pG-treat_Subtel_10p+18p_OICR": ["GSM4104107_pG-treat_Subtel_10p+18p_OICR.bed.gz"], "cG13-untreat_Subtel_9p+Xq_OICR": ["GSM4104108_cG13-untreat_Subtel_9p+Xq_OICR.bed.gz"], "cG13-untreat_Subtel_7q_OICR": ["GSM4104109_cG13-untreat_Subtel_7q_OICR.bed.gz"], "cG13-untreat_Subtel_5p_OICR": ["GSM4104110_cG13-untreat_Subtel_5p_OICR.bed.gz"], "cG13-untreat_Subtel_4p_OICR": ["GSM4104111_cG13-untreat_Subtel_4p_OICR.bed.gz"], "cG13-untreat_Subtel_2p_OICR": ["GSM4104112_cG13-untreat_Subtel_2p_OICR.bed.gz"], "cG13-untreat_Subtel_10q_2q+4q_OICR": ["GSM4104113_cG13-untreat_Subtel_10q_2q+4q_OICR.bed.gz"], "cG13-untreat_Subtel_10p+18p_OICR": ["GSM4104114_cG13-untreat_Subtel_10p+18p_OICR.bed.gz"], "cG13-treat_Subtel_9p+Xq_OICR": ["GSM4104115_cG13-treat_Subtel_9p+Xq_OICR.bed.gz"], "cG13-treat_Subtel_7q_OICR": ["GSM4104116_cG13-treat_Subtel_7q_OICR.bed.gz"], "cG13-treat_Subtel_5p_OICR": ["GSM4104117_cG13-treat_Subtel_5p_OICR.bed.gz"], "cG13-treat_Subtel_4p_OICR": ["GSM4104118_cG13-treat_Subtel_4p_OICR.bed.gz"], "cG13-treat_Subtel_2p_OICR": ["GSM4104119_cG13-treat_Subtel_2p_OICR.bed.gz"], "cG13-treat_Subtel_10q_2q+4q_OICR": ["GSM4104120_cG13-treat_Subtel_10q_2q+4q_OICR.bed.gz"], "cG13-treat_Subtel_10p+18p_OICR": ["GSM4104121_cG13-treat_Subtel_10p+18p_OICR.bed.gz"], "WGBS_Ctrl": ["GSM4072636_Subtelomeric_CpGs_UNp62_4x-100x_methylation.bed.gz"], "WGBS_ICF1pR": ["GSM4072637_Subtelomeric_CpGs_pR_4x-100x_methylation.bed.gz"], "WGBS_cR7": ["GSM4072638_Subtelomeric_CpGs_pGp32_4x-100x_methylation.bed.gz"], "WGBS_cR35": ["GSM4072639_Subtelomeric_CpGs_cR7p62_4x-100x_methylation.bed.gz"], "WGBS_ICF1pG": ["GSM4072640_Subtelomeric_CpGs_cR35p60_4x-100x_methylation.bed.gz"], "WGBS_pG_cG13": ["GSM4072641_Subtelomeric_CpGs_cG13p27_4x-100x_methylation.bed.gz"], "WGBS_pG_cG50": ["GSM4072642_Subtelomeric_CpGs_cG50p30_4x-100x_methylation.bed.gz"], "T47D_TFIIIC_Serum_ChIP-seq": ["GSM3395051_T47D_TFIIIC_Serum_peaks.bed.gz"], "T47D_BDP1_Serum_ChIP-seq": ["GSM3395052_T47D_BDP1_Serum_peaks.bed.gz"], "T47D_POL3_Serum_ChIP-seq": ["GSM3395053_T47D_POL3_Serum_peaks.bed.gz"], "T47D_TFIIIC_noSerum_ChIP-seq": ["GSM3395055_T47D_TFIIIC_noSerum_peaks.bed.gz"], "T47D_BDP1_noSerum_ChIP-seq": ["GSM3395056_T47D_BDP1_noSerum_peaks.bed.gz"], "T47D_POL3_noSerum_ChIP-seq": ["GSM3395057_T47D_POL3_noSerum_peaks.bed.gz"], "MCF10A_TFIIIC_Serum_ChIP-seq": ["GSM3395059_MCF10A_TFIIIC_Serum_peaks.bed.gz"], "MCF10A_BDP1_Serum_ChIP-seq": ["GSM3395060_MCF10A_BDP1_Serum_peaks.bed.gz"], "MCF10A_POL3_Serum_ChIP-seq": ["GSM3395061_MCF10A_POL3_Serum_peaks.bed.gz"], "MCF10A_TFIIIC_noSerum_ChIP-seq": ["GSM3395063_MCF10A_TFIIIC_noSerum_peaks.bed.gz"], "MCF10A_BDP1_noSerum_ChIP-seq": ["GSM3395064_MCF10A_BDP1_noSerum_peaks.bed.gz"], "MCF10A_POL3_noSerum_ChIP-seq": ["GSM3395065_MCF10A_POL3_noSerum_peaks.bed.gz"], "T98G_TFIIIC_Serum_ChIP-seq": ["GSM3395067_T98G_TFIIIC_Serum_peaks.bed.gz"], "T98G_TFIIIC_noSerum_ChIP-seq": ["GSM3395069_T98G_TFIIIC_noSerum_peaks.bed.gz"], "IMR90_TFIIIC_Serum_ChIP-seq": ["GSM3395071_IMR90_TFIIIC_Serum_peaks.bed.gz"], "IMR90_TFIIIC_noSerum_ChIP-seq": ["GSM3395073_IMR90_TFIIIC_noSerum_peaks.bed.gz"], "T47D_CTCF_Serum_ChIP-seq": ["GSM3395074_T47D_CTCF_Serum_peaks.bed.gz"], "T47D_H3K18ac_Serum_ChIP-seq": ["GSM3395075_T47D_H3K18ac_Serum_peaks.bed.gz"], "T47D_H3K18ac_noSerum_ChIP-seq": ["GSM3395076_T47D_H3K18ac_noSerum_peaks.bed.gz"], "T47D_POL2_Serum_ChIP-seq": ["GSM3395077_T47D_POL2_Serum_peaks.bed.gz"], "T47D_POL2_noSerum_ChIP-seq": ["GSM3395078_T47D_POL2_noSerum_peaks.bed.gz"], "T47D_CTCF_NoSerum_ChIP-seq": ["GSM3395079_T47D_CTCF_noSerum_peaks.bed.gz"], "T47D_TFIIIC_reserum": ["GSM3395080_T47D_TFIIIC_reserum_peaks.bed.gz"], "T98G_TFIIIC_serum_recovery": ["GSM3395082_T98G_TFIIIC_serum_recovery_peaks.bed.gz"], "T47D H3K9ac Serum": ["GSM4001131_T47D_H3K9ac_Serum_peaks.bed.gz"], "T47D H3K9ac noSerum": ["GSM4001132_T47D_H3K9ac_noSerum_peaks.bed.gz"], "T47D siCTRL TFIIIC chip": ["GSM4001133_siADNP_TFIIIC_peaks.bed.gz"], "T47D siADNP TFIIIC chip": ["GSM4001134_siCTRL_TFIIIC_peaks.bed.gz"], "T47D H3K27ac Serum": ["GSM4001135_T47D_H3K27ac_Serum_peaks.bed.gz"], "T47D H3K27ac noSerum": ["GSM4001136_T47D_H3K27ac_noSerum_peaks.bed.gz"], "T47D GTF3C1 noSerum": ["GSM4001137_comb_T47D_GTF3C1_T0_peaks.bed.gz"], "H3K27ac WT ChIP": ["GSM3882322_H3K27ac_DMSO_SKUT_peaks.narrowPeak.bz2"], "H3K27ac H4KO ChIP": ["GSM3882323_H3K27ac_HDAC4KO_SKUT_peaks.narrowPeak.bz2"], "H3K27ac H9KO ChIP": ["GSM3882324_H3K27ac_HDAC9KO_SKUT_peaks.narrowPeak.bz2"], "HDAC4 WT ChIP": ["GSM3882325_HDAC4_DMSO_SKUT_peaks.narrowPeak.bz2"], "HDAC9 WT ChIP": ["GSM3882326_HDAC9_DMSO_SKUT_peaks.narrowPeak.bz2"], "MEF2D WT ChIP": ["GSM3882327_MEF2D_DMSO_SKUT_peaks.narrowPeak.bz2"], "A2058_r1": ["GSM3861510_A2058_r1.txn_units.bed.gz"], "A2058_r2": ["GSM3861511_A2058_r2.txn_units.bed.gz"], "A375": ["GSM3861512_A375.txn_units.bed.gz"], "A673": ["GSM3861513_A673.txn_units.bed.gz"], "A673_UV": ["GSM3861514_A673_UV.txn_units.bed.gz"], "BxPC3": ["GSM3861515_BxPC3.txn_units.bed.gz"], "BxPC3_UV": ["GSM3861516_BxPC3_UV.txn_units.bed.gz"], "csb": ["GSM3861517_csb.txn_units.bed.gz"], "GM12878_r1": ["GSM3861518_GM12878_r1.txn_units.bed.gz"], "GM12878_r2": ["GSM3861519_GM12878_r2.txn_units.bed.gz"], "GM12878_UV": ["GSM3861520_GM12878_UV.txn_units.bed.gz"], "GM12891": ["GSM3861521_GM12891.txn_units.bed.gz"], "HAP1": ["GSM3861522_HAP1.txn_units.bed.gz"], "HCT116_r1": ["GSM3861523_HCT116_r1.txn_units.bed.gz"], "HCT116_r2": ["GSM3861524_HCT116_r2.txn_units.bed.gz"], "HCT116_r3": ["GSM3861525_HCT116_r3.txn_units.bed.gz"], "HCT116_r4": ["GSM3861526_HCT116_r4.txn_units.bed.gz"], "HCT116_UV": ["GSM3861527_HCT116_UV.txn_units.bed.gz"], "HEK293": ["GSM3861528_HEK293.txn_units.bed.gz"], "HEK293_UV": ["GSM3861529_HEK293_UV.txn_units.bed.gz"], "HEPB3": ["GSM3861530_HEPB3.txn_units.bed.gz"], "HEPG2": ["GSM3861531_HEPG2.txn_units.bed.gz"], "HF_r1": ["GSM3861532_HF_r1.txn_units.bed.gz"], "HF_r2": ["GSM3861533_HF_r2.txn_units.bed.gz"], "HF_r3": ["GSM3861534_HF_r3.txn_units.bed.gz"], "HF_r4": ["GSM3861535_HF_r4.txn_units.bed.gz"], "HME": ["GSM3861536_HME.txn_units.bed.gz"], "HPDE": ["GSM3861537_HPDE.txn_units.bed.gz"], "HPDE_UV": ["GSM3861538_HPDE_UV.txn_units.bed.gz"], "HPNE": ["GSM3861539_HPNE.txn_units.bed.gz"], "HPNE_UV": ["GSM3861540_HPNE_UV.txn_units.bed.gz"], "K562_r1": ["GSM3861541_K562_r1.txn_units.bed.gz"], "K562_r2": ["GSM3861542_K562_r2.txn_units.bed.gz"], "K562_r3": ["GSM3861543_K562_r3.txn_units.bed.gz"], "K562_r4": ["GSM3861544_K562_r4.txn_units.bed.gz"], "K562_r5": ["GSM3861545_K562_r5.txn_units.bed.gz"], "K562_UV": ["GSM3861546_K562_UV.txn_units.bed.gz"], "MCF7_r1": ["GSM3861547_MCF7_r1.txn_units.bed.gz"], "MCF7_r2": ["GSM3861548_MCF7_r2.txn_units.bed.gz"], "MCF7_r3": ["GSM3861549_MCF7_r3.txn_units.bed.gz"], "MCF7_r4": ["GSM3861550_MCF7_r4.txn_units.bed.gz"], "MCF7_r5": ["GSM3861551_MCF7_r5.txn_units.bed.gz"], "MiaPaCa_r1": ["GSM3861552_MiaPaCa_r1.txn_units.bed.gz"], "MiaPaCa_r2": ["GSM3861553_MiaPaCa_r2.txn_units.bed.gz"], "MiaPaCa_r3": ["GSM3861554_MiaPaCa_r3.txn_units.bed.gz"], "MiaPaCa_r4": ["GSM3861555_MiaPaCa_r4.txn_units.bed.gz"], "MiaPaCa_r5": ["GSM3861556_MiaPaCa_r5.txn_units.bed.gz"], "MiaPaCa_r6": ["GSM3861557_MiaPaCa_r6.txn_units.bed.gz"], "MiaPaCa_UV": ["GSM3861558_MiaPaCa_UV.txn_units.bed.gz"], "panc1_r1": ["GSM3861559_panc1_r1.txn_units.bed.gz"], "panc1_r2": ["GSM3861560_panc1_r2.txn_units.bed.gz"], "panc1_r3": ["GSM3861561_panc1_r3.txn_units.bed.gz"], "panc1_r4": ["GSM3861562_panc1_r4.txn_units.bed.gz"], "panc1_r5": ["GSM3861563_panc1_r5.txn_units.bed.gz"], "panc1_UV": ["GSM3861564_panc1_UV.txn_units.bed.gz"], "T47D_r1": ["GSM3861565_T47D_r1.txn_units.bed.gz"], "T47D_r2": ["GSM3861566_T47D_r2.txn_units.bed.gz"], "U2OS_r1": ["GSM3861567_U2OS_r1.txn_units.bed.gz"], "U2OS_r2": ["GSM3861568_U2OS_r2.txn_units.bed.gz"], "U2OS_r3": ["GSM3861569_U2OS_r3.txn_units.bed.gz"], "U87_r1": ["GSM3861570_U87_r1.txn_units.bed.gz"], "U87_r2": ["GSM3861571_U87_r2.txn_units.bed.gz"], "UM16": ["GSM3861572_UM16.txn_units.bed.gz"], "UM16_UV": ["GSM3861573_UM16_UV.txn_units.bed.gz"], "UM28": ["GSM3861574_UM28.txn_units.bed.gz"], "UM28_UV": ["GSM3861575_UM28_UV.txn_units.bed.gz"], "UM5_r1": ["GSM3861576_UM5_r1.txn_units.bed.gz"], "UM5_r2": ["GSM3861577_UM5_r2.txn_units.bed.gz"], "UM5_UV": ["GSM3861578_UM5_UV.txn_units.bed.gz"], "UM59": ["GSM3861579_UM59.txn_units.bed.gz"], "UM59_UV": ["GSM3861580_UM59_UV.txn_units.bed.gz"], "UML49": ["GSM3861581_UML49.txn_units.bed.gz"], "UMUC9_r1": ["GSM3861582_UMUC9_r1.txn_units.bed.gz"], "UMUC9_r2": ["GSM3861583_UMUC9_r2.txn_units.bed.gz"], "xpc": ["GSM3861584_xpc.txn_units.bed.gz"], "20134-atf4 (ChIP-seq)": ["GSM3692149_20134_atf4_peaks.narrowPeak.gz"], "20138-atf4 (ChIP-seq)": ["GSM3692150_20138_atf4_peaks.narrowPeak.gz"], "2016018-atf4 (ChIP-seq)": ["GSM3692151_2016018_atf4_peaks.narrowPeak.gz"], "2016029-atf4 (ChIP-seq)": ["GSM3692152_2016029_atf4_peaks.narrowPeak.gz"], "2017001-atf4 (ChIP-seq)": ["GSM3692153_2017001_atf4_peaks.narrowPeak.gz"], "2017011-atf4 (ChIP-seq)": ["GSM3692154_2017011_atf4_peaks.narrowPeak.gz"], "2017014-atf4 (ChIP-seq)": ["GSM3692155_2017014_atf4_peaks.narrowPeak.gz"], "2017025-atf4 (ChIP-seq)": ["GSM3692156_2017025-atf4_peaks.narrowPeak.gz"], "2017039-atf4 (ChIP-seq)": ["GSM3692157_2017039-atf4_peaks.narrowPeak.gz"], "201704-atf4 (ChIP-seq)": ["GSM3692158_201704_atf4_peaks.narrowPeak.gz"], "2018001-atf4 (ChIP-seq)": ["GSM3692159_2018001-atf4_peaks.narrowPeak.gz"], "2018006-atf4 (ChIP-seq)": ["GSM3692160_2018006-atf4_peaks.narrowPeak.gz"], "20134-olig2 (ChIP-seq)": ["GSM3692161_20134_olig2_peaks.narrowPeak.gz"], "20138-olig2 (ChIP-seq)": ["GSM3692162_20138_olig2_peaks.narrowPeak.gz"], "2016018-olig2 (ChIP-seq)": ["GSM3692163_2016018_olig2_peaks.narrowPeak.gz"], "2016029-olig2 (ChIP-seq)": ["GSM3692164_2016029_olig2_peaks.narrowPeak.gz"], "2017011-olig2 (ChIP-seq)": ["GSM3692165_2017011_olig2_peaks.narrowPeak.gz"], "2017014-olig2 (ChIP-seq)": ["GSM3692166_2017014_olig2_peaks.narrowPeak.gz"], "2017025-olig2 (ChIP-seq)": ["GSM3692167_2017025-olig2_peaks.narrowPeak.gz"], "2017039-olig2 (ChIP-seq)": ["GSM3692168_2017039-olig2_peaks.narrowPeak.gz"], "201704-olig2 (ChIP-seq)": ["GSM3692169_201704_olig2_peaks.narrowPeak.gz"], "2018001-olig2 (ChIP-seq)": ["GSM3692170_2018001-olig2_peaks.narrowPeak.gz"], "2018006-olig2 (ChIP-seq)": ["GSM3692171_2018006-olig2_peaks.narrowPeak.gz"], "20180807-thra1 (ChIP-seq)": ["GSM3692172_20180807-thra1_peaks.narrowPeak.gz"], "ad11-thra1 (ChIP-seq)": ["GSM3692173_ad11-thra1_peaks.narrowPeak.gz"], "ad16-thra1 (ChIP-seq)": ["GSM3692174_ad16-thra1_peaks.narrowPeak.gz"], "ad1-thra1 (ChIP-seq)": ["GSM3692175_ad1-thra1_peaks.narrowPeak.gz"], "ad7-thra1 (ChIP-seq)": ["GSM3692176_ad7-thra1_peaks.narrowPeak.gz"], "c13-thra1 (ChIP-seq)": ["GSM3692177_c13-thra1_peaks.narrowPeak.gz"], "c23-thra1 (ChIP-seq)": ["GSM3692178_c23-thra1_peaks.narrowPeak.gz"], "c31-thra1 (ChIP-seq)": ["GSM3692179_c31-thra1_peaks.narrowPeak.gz"], "aD11 (ATAC-Seq)": ["GSM3692184_aD11.2_peaks.broadPeak.gz"], "aD16 (ATAC-Seq)": ["GSM3692185_aD16.2_peaks.broadPeak.gz"], "aD18 (ATAC-Seq)": ["GSM3692186_aD18.2_peaks.broadPeak.gz"], "aD2 (ATAC-Seq)": ["GSM3692187_aD2.2_peaks.broadPeak.gz"], "aD21 (ATAC-Seq)": ["GSM3692188_aD21.2_peaks.broadPeak.gz"], "aD7 (ATAC-Seq)": ["GSM3692189_aD7.2_peaks.broadPeak.gz"], "C13 (ATAC-Seq)": ["GSM3692190_C13.2_peaks.broadPeak.gz"], "C13B (ATAC-Seq)": ["GSM3692191_C13B.2_peaks.broadPeak.gz"], "C23B (ATAC-Seq)": ["GSM3692192_C23B.2_peaks.broadPeak.gz"], "C25 (ATAC-Seq)": ["GSM3692193_C25.2_peaks.broadPeak.gz"], "C31 (ATAC-Seq)": ["GSM3692194_C31.2_peaks.broadPeak.gz"], "C31B (ATAC-Seq)": ["GSM3692195_C31B.2_peaks.broadPeak.gz"], "iPSC myotube-DMSO-ATACseq-Exp1": ["GSM3744435_01_day2_m2_summits.bed.gz"], "iPSC myotube-DMSO-ATACseq-Exp2": ["GSM3744436_02_day2_m2_summits.bed.gz"], "iPSC myotube-DMSO-ATACseq-Exp3": ["GSM3744437_03_day2_m2_summits.bed.gz"], "iPSC myotube-SDDF-ATACseq-Exp1": ["GSM3744438_04_day2_m2_summits.bed.gz"], "iPSC myotube-SDDF-ATACseq-Exp2": ["GSM3744439_05_day2_m2_summits.bed.gz"], "iPSC myotube-SDDF-ATACseq-Exp3": ["GSM3744440_06_day2_m2_summits.bed.gz"], "GIST-T1 CTCF": ["GSM3376521_t1_cellline_CTCF_t11_fp-stylefactor_hg38.bed.gz"], "KIT1 CTCF": ["GSM3376526_KIT1_CTCF_101_fp-stylefactor_hg38.bed.gz"], "KIT1 H3K27ac": ["GSM3376527_KIT1_H3K27ac_102_fp-stylesuper-L0_hg38.bed.gz", "GSM3376527_KIT1_H3K27ac_102_fp-stylehistone_hg38.bed.gz"], "KIT2 CTCF": ["GSM3376530_KIT2_CTCF_271_fp-stylefactor_hg38.bed.gz"], "KIT2 H3K27ac": ["GSM3376531_KIT2_H3K27ac_2722_fp-stylesuper-L0_hg38.bed.gz", "GSM3376531_KIT2_H3K27ac_2722_fp-stylehistone_hg38.bed.gz"], "KIT3 CTCF": ["GSM3376534_KIT3_CTCF_451_fp-stylefactor_hg38.bed.gz"], "KIT3 H3K27ac": ["GSM3376535_KIT3_H3K27ac_452_fp-stylehistone_hg38.bed.gz", "GSM3376535_KIT3_H3K27ac_452_fp-stylesuper-L0_hg38.bed.gz"], "KIT4 CTCF": ["GSM3376538_KIT4_CTCF_541_fp-stylefactor_hg38.bed.gz"], "KIT4 H3K27ac": ["GSM3376539_KIT4_H3K27ac_5423_fp-stylesuper-L0_hg38.bed.gz", "GSM3376539_KIT4_H3K27ac_5423_fp-stylehistone_hg38.bed.gz"], "KIT5 CTCF": ["GSM3376542_KIT5_CTCF_631_fp-stylefactor_hg38.bed.gz"], "KIT5 H3K27ac": ["GSM3376543_KIT5_H3K27ac_6322_fp-stylehistone_hg38.bed.gz", "GSM3376543_KIT5_H3K27ac_6322_fp-stylesuper-L0_hg38.bed.gz"], "KIT6 CTCF": ["GSM3376546_KIT6_CTCF_1468921_fp-stylefactor_hg38.bed.gz"], "KIT7 CTCF": ["GSM3376549_KIT7_CTCF_1286911_fp-stylefactor_hg38.bed.gz"], "KIT7 H3K27ac": ["GSM3376550_KIT7_H3K27ac_1286912_fp-stylesuper-L0_hg38.bed.gz", "GSM3376550_KIT7_H3K27ac_1286912_fp-stylehistone_hg38.bed.gz"], "KIT8 CTCF": ["GSM3376553_KIT8_CTCF_122331_fp-stylefactor_hg38.bed.gz"], "KIT8 H3K27ac": ["GSM3376554_KIT8_H3K27ac_122332_fp-stylehistone_hg38.bed.gz", "GSM3376554_KIT8_H3K27ac_122332_fp-stylesuper-L0_hg38.bed.gz"], "KIT9 CTCF": ["GSM3376557_KIT9_CTCF_288251_fp-stylefactor_hg38.bed.gz"], "KIT9 H3K27ac": ["GSM3376558_KIT9_H3K27ac_2882523_fp-stylesuper-L0_hg38.bed.gz", "GSM3376558_KIT9_H3K27ac_2882523_fp-stylehistone_hg38.bed.gz"], "KIT10 CTCF": ["GSM3376561_KIT10_CTCF_171_fp-stylefactor_hg38.bed.gz"], "KIT11 CTCF": ["GSM3376563_KIT11_CTCF_145551_fp-stylefactor_hg38.bed.gz"], "KIT11 H3K27ac": ["GSM3376564_KIT11_H3K27ac_145552_fp-stylehistone_hg38.bed.gz", "GSM3376564_KIT11_H3K27ac_145552_fp-stylesuper-L0_hg38.bed.gz"], "NSM1 CTCF": ["GSM3376566_nsm1_CTCF_9271_fp-stylefactor_hg38.bed.gz"], "NSM1 H3K27ac": ["GSM3376567_nsm1_H3K27ac_9272_fp-stylesuper-L0_hg38.bed.gz", "GSM3376567_nsm1_H3K27ac_9272_fp-stylehistone_hg38.bed.gz"], "NSM2 CTCF": ["GSM3376570_nsm2_CTCF_92110_fp-stylefactor_hg38.bed.gz"], "NSM3 CTCF": ["GSM3376573_nsm3_CTCF_92121_fp-stylefactor_hg38.bed.gz"], "NSM4 CTCF": ["GSM3376575_nsm4_CTCF_92161_fp-stylefactor_hg38.bed.gz"], "PDGFRA1 CTCF": ["GSM3376577_PDGFRA1_CTCF_461_fp-stylefactor_hg38.bed.gz"], "PDGFRA1 H3K27ac": ["GSM3376578_PDGFRA1_H3K27ac_462_fp-stylehistone_hg38.bed.gz", "GSM3376578_PDGFRA1_H3K27ac_462_fp-stylesuper-L0_hg38.bed.gz"], "PDGFRA2 CTCF": ["GSM3376581_PDGFRA2_CTCF_94431_fp-stylefactor_hg38.bed.gz"], "PDGFRA2 H3K27ac": ["GSM3376582_PDGFRA2_H3K27ac_94432_fp-stylesuper-L0_hg38.bed.gz", "GSM3376582_PDGFRA2_H3K27ac_94432_fp-stylehistone_hg38.bed.gz"], "S5 CTCF": ["GSM3376589_s5_CTCF_31701_fp-stylefactor_hg38.bed.gz"], "S5 H3K27ac": ["GSM3376590_s5_H3K27ac_31702_fp-stylehistone_hg38.bed.gz", "GSM3376590_s5_H3K27ac_31702_fp-stylesuper-L0_hg38.bed.gz"], "S6 CTCF": ["GSM3376594_s6_CTCF_35701_fp-stylefactor_hg38.bed.gz"], "S6 H3K27ac": ["GSM3376595_s6_H3K27ac_35702_fp-stylehistone_hg38.bed.gz", "GSM3376595_s6_H3K27ac_35702_fp-stylesuper-L0_hg38.bed.gz"], "S1 CTCF": ["GSM3377439_S1_CTCF_201_fp-stylefactor_hg38.bed.gz"], "S1 H3K27ac": ["GSM3377440_S1_H3K27ac_202_fp-stylesuper-L0_hg38.bed.gz", "GSM3377440_S1_H3K27ac_202_fp-stylehistone_hg38.bed.gz"], "S2 CTCF": ["GSM3377443_S2_CTCF_221_fp-stylefactor_hg38.bed.gz"], "S2 H3K27ac": ["GSM3377444_S2_H3K27ac_2123_fp-stylesuper-L0_hg38.bed.gz", "GSM3377444_S2_H3K27ac_2123_fp-stylehistone_hg38.bed.gz"], "S3 CTCF": ["GSM3377447_S3_CTCF_551_fp-stylefactor_hg38.bed.gz"], "S3 H3K27ac": ["GSM3377448_S3_H3K27ac_552_fp-stylehistone_hg38.bed.gz", "GSM3377448_S3_H3K27ac_552_fp-stylesuper-L0_hg38.bed.gz"], "S4 CTCF": ["GSM3377451_S4_CTCF_571_fp-stylefactor_hg38.bed.gz"], "S4 H3K27ac": ["GSM3377452_S4_H3K27ac_572_fp-stylehistone_hg38.bed.gz", "GSM3377452_S4_H3K27ac_572_fp-stylesuper-L0_hg38.bed.gz"], "S1 xenograft CTCF": ["GSM3983450_xeno_CTCF_2031_fp-stylefactor_hg38.bed.gz"], "S1 xenograft H3K27ac": ["GSM3983451_xeno_H3K27ac_2032_fp-stylehistone_hg38.bed.gz"], "SF11964_snATAC": ["GSM4119513_SF11964_snATAC_peaks.bed.gz"], "SF12017_snATAC": ["GSM4119514_SF12017_snATAC_peaks.bed.gz"], "SF11949_snATAC": ["GSM4119515_SF11949_snATAC_peaks.bed.gz"], "SF11612_snATAC": ["GSM4119516_SF11612_snATAC_peaks.bed.gz"], "SF11979_snATAC": ["GSM4119517_SF11979_snATAC_peaks.bed.gz"], "SF11956_snATAC": ["GSM4119518_SF11956_snATAC_peaks.bed.gz"], "SF11215_snATAC": ["GSM4119519_SF11215_peaks.bed.gz"], "SF11331_snATAC": ["GSM4119520_SF11331_peaks.bed.gz"], "CTCF_CT_ChIP-seq": ["GSM3715311_CTCF_CT_peaks.bed.gz", "GSM3715311_RM_CTCF_CT_peaks.bed.gz"], "CTCF_KD_ChIP-seq": ["GSM3715312_CTCF_KD_peaks.bed.gz", "GSM3715312_RM_CTCF_KD_peaks.bed.gz"], "CTCF_OE_ChIP-seq": ["GSM3715313_RM_CTCF_OE_peaks.bed.gz", "GSM3715313_CTCF_OE_peaks.bed.gz"], "H3K4me3_CT_ChIP-seq": ["GSM3715314_H3K4me3_CT_peaks.bed.gz"], "H3K4me3_KD_ChIP-seq": ["GSM3715315_H3K4me3_KD_peaks.bed.gz"], "H3K9me3_CT_ChIP-seq": ["GSM3715316_H3K9me3_CT_peaks.bed.gz"], "H3K9me3_KD_ChIP-seq": ["GSM3715317_H3K9me3_KD_peaks.bed.gz"], "H3K27me3_CT_ChIP-seq": ["GSM3715318_H3K27me3_CT_peaks.bed.gz"], "H3K27me3_KD_ChIP-seq": ["GSM3715319_H3K27me3_KD_peaks.bed.gz"], "Input": ["GSM3715320_Input_peaks.bed.gz"], "AML_P1_Dx_H3K27ac": ["GSM3316846_AML_P1_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P2_Dx_H3K27ac": ["GSM3316847_AML_P2_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P3_Dx_H3K27ac": ["GSM3316848_AML_P3_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P4_Dx_H3K27ac": ["GSM3316849_AML_P4_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P5_Dx_H3K27ac": ["GSM3316850_AML_P5_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P6_Dx_H3K27ac": ["GSM3316851_AML_P6_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P7_Dx_H3K27ac": ["GSM3316852_AML_P7_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P8_Dx_H3K27ac": ["GSM3316853_AML_P8_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P9_Dx_H3K27ac": ["GSM3316854_AML_P9_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P10_Dx_H3K27ac": ["GSM3316855_AML_P10_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P11_Dx_H3K27ac": ["GSM3316856_AML_P11_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P12_Dx_H3K27ac": ["GSM3316857_AML_P12_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P13_Dx_H3K27ac": ["GSM3316858_AML_P13_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P14_Dx_H3K27ac": ["GSM3316859_AML_P14_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P15_Dx_H3K27ac": ["GSM3316860_AML_P15_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P16_Dx_H3K27ac": ["GSM3316861_AML_P16_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P16_Rel_H3K27ac": ["GSM3316862_AML_P16_Rel_H3K27ac_peaks.narrowPeak.gz"], "AML_P17_Dx_H3K27ac": ["GSM3316863_AML_P17_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P18_Dx_H3K27ac": ["GSM3316864_AML_P18_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P19_Rel_H3K27ac": ["GSM3316865_AML_P19_Rel_H3K27ac_peaks.narrowPeak.gz"], "AML_P20_Dx_H3K27ac": ["GSM3316866_AML_P20_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P20_Rel_H3K27ac": ["GSM3316867_AML_P20_Rel_H3K27ac_peaks.narrowPeak.gz"], "AML_P21_Dx_H3K27ac": ["GSM3316868_AML_P21_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P21_Rel_H3K27ac": ["GSM3316869_AML_P21_Rel_H3K27ac_peaks.narrowPeak.gz"], "AML_P22_Dx_H3K27ac": ["GSM3316870_AML_P22_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P22_Rel_H3K27ac": ["GSM3316871_AML_P22_Rel_H3K27ac_peaks.narrowPeak.gz"], "AML_P23_Dx_H3K27ac": ["GSM3316872_AML_P23_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P23_Rel_H3K27ac": ["GSM3316873_AML_P23_Rel_H3K27ac_peaks.narrowPeak.gz"], "AML_P24_Dx_H3K27ac": ["GSM3316874_AML_P24_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P24_Rel_H3K27ac": ["GSM3316875_AML_P24_Rel_H3K27ac_peaks.narrowPeak.gz"], "AML_P25_Dx_H3K27ac": ["GSM3316876_AML_P25_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P25_Rel_H3K27ac": ["GSM3316877_AML_P25_Rel_H3K27ac_peaks.narrowPeak.gz"], "AML_P26_Dx_H3K27ac": ["GSM3316878_AML_P26_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P26_Rel_H3K27ac": ["GSM3316879_AML_P26_Rel_H3K27ac_peaks.narrowPeak.gz"], "AML_P27_Dx_H3K27ac": ["GSM3316880_AML_P27_Dx_H3K27ac_peaks.narrowPeak.gz"], "AML_P27_Rel_H3K27ac": ["GSM3316881_AML_P27_Rel_H3K27ac_peaks.narrowPeak.gz"], "iPSC_CONTROL_rep1": ["GSM4059133_iPSC_CONTROL_rep1.bed.gz"], "iPSC_CONTROL_rep2": ["GSM4059134_iPSC_CONTROL_rep2.bed.gz"], "iPSC_CONTROL_rep3": ["GSM4059135_iPSC_CONTROL_rep3.bed.gz"], "DE_rep1": ["GSM4059136_DE_rep1.bed.gz"], "DE_rep2": ["GSM4059137_DE_rep2.bed.gz"], "DE_rep3": ["GSM4059138_DE_rep3.bed.gz"], "HE_rep1": ["GSM4059139_HE_rep1.bed.gz"], "HE_rep2": ["GSM4059140_HE_rep2.bed.gz"], "HE_rep3": ["GSM4059141_HE_rep3.bed.gz"], "HLC_rep1": ["GSM4059142_HLC_rep1.bed.gz"], "HLC_rep2": ["GSM4059143_HLC_rep2.bed.gz"], "HLC_rep3": ["GSM4059144_HLC_rep3.bed.gz"], "HL-60_H3K27ac": ["GSM4057498_HL-60_H3K27ac.broadPeak.gz"], "Molm13_H3K27ac": ["GSM4057500_Molm13_H3K27ac.broadPeak.gz"], "OCI-AML3-empty_H3K27ac": ["GSM4057502_OCI-AML3_H3K27ac.broadPeak.gz"], "K562-empty_H3K27ac": ["GSM4057509_K562_H3K27ac.broadPeak.gz"], "K562_LTR2BgRNAs_dCas9": ["GSM4057515_K562_LTR2BgRNAs_dCas9.narrowPeak.gz"], "OCI-AML3_Dnase": ["GSM4057517_OCI-AML3_DNase.narrowPeak.gz"], "Molm13_Dnase": ["GSM4057518_Molm13_DNase.narrowPeak.gz"], "HL-60_Dnase": ["GSM4057519_HL-60_DNase.narrowPeak.gz"], "NSD2_High_1_CTCF-ChIPseq": ["GSM3791747_2-KMS_CTCF_noinput_peaks.bed.gz"], "NSD2_High_2_CTCF-ChIPseq": ["GSM3791748_4-NTKO2-1_CTCF_noinput_peaks.bed.gz"], "NSD2_High_3_CTCF-ChIPseq": ["GSM3791749_5-NTKO2-2_CTCF_noinput_peaks.bed.gz"], "NSD2_Low_1_CTCF-ChIPseq": ["GSM3791750_6-TKO1-1_CTCF_noinput_peaks.bed.gz"], "NSD2_Low_2_CTCF-ChIPseq": ["GSM3791751_7-TKO2-1_CTCF_noinput_peaks.bed.gz"], "NSD2_Low_3_CTCF-ChIPseq": ["GSM3791752_8-TKO2-2_CTCF_noinput_peaks.bed.gz"], "NSD2_High_1_H3K27ac-ChIPseq": ["GSM3791753_KMS11_H3K27ac_noinput_e6_peaks.bed.gz"], "NSD2_High_2_H3K27ac-ChIPseq": ["GSM3791754_NTKO2-1_H3K27ac_noinput_e6_peaks.bed.gz"], "NSD2_High_3_H3K27ac-ChIPseq": ["GSM3791755_NTKO2-2_H3K27ac_noinput_e6_peaks.bed.gz"], "NSD2_Low_1_H3K27ac-ChIPseq": ["GSM3791756_TKO1_H3K27ac_noinput_e6_peaks.bed.gz"], "NSD2_Low_2_H3K27ac-ChIPseq": ["GSM3791757_TKO2-1_H3K27ac_noinput_e6_peaks.bed.gz"], "NSD2_Low_3_H3K27ac-ChIPseq": ["GSM3791758_TKO2-2_H3K27ac_noinput_e6_peaks.bed.gz"], "NSD2_High_1_Rad21-ChIPseq": ["GSM3791759_NTKO_Rad21_rep1_noinput_e5_peaks.bed.gz"], "NSD2_High_2_Rad21-ChIPseq": ["GSM3791760_NTKO_Rad21_rep2_noinput_e5_peaks.bed.gz"], "NSD2_Low_1_Rad21-ChIPseq": ["GSM3791761_TKO_Rad21_rep1_noinput_e5_peaks.bed.gz"], "NSD2_Low_2_Rad21-ChIPseq": ["GSM3791762_TKO_Rad21_rep2_noinput_e5_peaks.bed.gz"], "HepG2_100ng_1": ["GSM3680079_HepG2_100ng_1_ratio.bed.gz"], "HepG2_100ng_2": ["GSM3680080_HepG2_100ng_2_ratio.bed.gz"], "HepG2_1ng_1": ["GSM3680081_HepG2_1ng_1_ratio.bed.gz"], "HepG2_1ng_2": ["GSM3680082_HepG2_1ng_2_ratio.bed.gz"], "K562_100ng_1": ["GSM3680083_K562_100ng_1_ratio.bed.gz"], "K562_100ng_2": ["GSM3680084_K562_100ng_2_ratio.bed.gz"], "K562_1ng_1": ["GSM3680085_K562_1ng_1_ratio.bed.gz"], "K562_1ng_2": ["GSM3680086_K562_1ng_2_ratio.bed.gz"], "HepG2_SC1": ["GSM3680087_HepG2_SC1_ratio.bed.gz"], "HepG2_SC2": ["GSM3680088_HepG2_SC2_ratio.bed.gz"], "HepG2_SC3": ["GSM3680089_HepG2_SC3_ratio.bed.gz"], "HepG2_SC4": ["GSM3680090_HepG2_SC4_ratio.bed.gz"], "HepG2_SC5": ["GSM3680091_HepG2_SC5_ratio.bed.gz"], "HepG2_SC6": ["GSM3680092_HepG2_SC6_ratio.bed.gz"], "HepG2_SC7": ["GSM3680093_HepG2_SC7_ratio.bed.gz"], "HepG2_SC8": ["GSM3680094_HepG2_SC8_ratio.bed.gz"], "HepG2_SC9": ["GSM3680095_HepG2_SC9_ratio.bed.gz"], "HepG2_SC10": ["GSM3680096_HepG2_SC10_ratio.bed.gz"], "K562_SC1": ["GSM3680097_K562_SC1_ratio.bed.gz"], "K562_SC2": ["GSM3680098_K562_SC2_ratio.bed.gz"], "K562_SC3": ["GSM3680099_K562_SC3_ratio.bed.gz"], "K562_SC4": ["GSM3680100_K562_SC4_ratio.bed.gz"], "K562_SC5": ["GSM3680101_K562_SC5_ratio.bed.gz"], "K562_SC6": ["GSM3680102_K562_SC6_ratio.bed.gz"], "K562_SC7": ["GSM3680103_K562_SC7_ratio.bed.gz"], "K562_SC8": ["GSM3680104_K562_SC8_ratio.bed.gz"], "K562_SC9": ["GSM3680105_K562_SC9_ratio.bed.gz"], "K562_SC10": ["GSM3680106_K562_SC10_ratio.bed.gz"], "ESC_100ng": ["GSM4026518_ESC_100ng_ratio.bed.gz"], "HEK TE VP6": ["GSM4026855_VP6_interactions.bed.gz"], "HEK TE VP7": ["GSM4026856_VP7_interactions.bed.gz"], "HEK TE VP8": ["GSM4026857_VP8_interactions.bed.gz"], "HEK TE VP9": ["GSM4026858_VP9_interactions.bed.gz"], "HEK TE VP10_1": ["GSM4026859_VP10_interactions.bed.gz"], "miCLIP_WT_1": ["GSM3682895_WT1_bc2.C2T.m6A.kmer.onlyDRACH.appended.bed.gz"], "miCLIP_WT_2": ["GSM3682896_WT2_bc5.C2T.m6A.kmer.onlyDRACH.appended.bed.gz"], "miCLIP_METTL5_KO_1": ["GSM3682897_METTL5KO1_bc7.C2T.m6A.kmer.onlyDRACH.appended.bed.gz"], "miCLIP_METTL5_KO_2": ["GSM3682898_METTL5KO2_bc8.C2T.m6A.kmer.onlyDRACH.appended.bed.gz"], "miCLIP_ZCCHC4_KO_1": ["GSM3682899_ZCCHC4KO1_bc4.C2T.m6A.kmer.onlyDRACH.appended.bed.gz"], "miCLIP_ZCCHC4_KO_2": ["GSM3682900_ZCCHC4KO2_bc9.C2T.m6A.kmer.onlyDRACH.appended.bed.gz"], "HEK293T.Cascade_HBE_crRNA.antiFlag.rep1": ["GSM3151927_HEK293T.Cascade_HBE_crRNA.antiFlag.rep1.dedup.masked.sorted_peaks.narrowPeak.gz"], "HEK293T.Cascade_HBE_crRNA.antiFlag.rep2": ["GSM3151928_HEK293T.Cascade_HBE_crRNA.antiFlag.rep2.dedup.masked.sorted_peaks.narrowPeak.gz"], "HEK293T.Cascade_HBE_crRNA.antiFlag.rep3": ["GSM3151929_HEK293T.Cascade_HBE_crRNA.antiFlag.rep3.dedup.masked.sorted_peaks.narrowPeak.gz"], "HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep1": ["GSM3151933_HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep1.dedup.masked.sorted_peaks.narrowPeak.gz"], "HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep2": ["GSM3151934_HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep2.dedup.masked.sorted_peaks.narrowPeak.gz"], "HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep3": ["GSM3151935_HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep3.dedup.masked.sorted_peaks.narrowPeak.gz"], "HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep1": ["GSM3151939_HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep1.dedup.masked.sorted_peaks.narrowPeak.gz"], "HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep2": ["GSM3151940_HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep2.dedup.masked.sorted_peaks.narrowPeak.gz"], "HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep3": ["GSM3151941_HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep3.dedup.masked.sorted_peaks.narrowPeak.gz"], "Untreated 1": ["GSM3093780_Lyu_ChIP_Seq_UN1e-3_peaks.broadPeak.gz"], "Untreated 2": ["GSM3093781_Lyu_ChIP_Seq_UN2e-3_peaks.broadPeak.gz"], "APH 1": ["GSM3093782_Lyu_ChIP_Seq_APH1e-3_peaks.broadPeak.gz"], "APH 2": ["GSM3093783_Lyu_ChIP_Seq_APH2e-3_peaks.broadPeak.gz"], "HU1": ["GSM3093784_Lyu_ChIP_Seq_HU1e-3_peaks.broadPeak.gz"], "HU2": ["GSM3093785_Lyu_ChIP_Seq_HU2e-3_peaks.broadPeak.gz"], "MMS1": ["GSM3093786_Lyu_ChIP_Seq_MMS1e-3_peaks.broadPeak.gz"], "MMS2": ["GSM3093787_Lyu_ChIP_Seq_MMS2e-3_peaks.broadPeak.gz"], "G523 CTCF IP, replicate 1": ["GSM3439930_G523_ctcf_ip_rep1_WRT_G523_ctcf_input_rep1_peaks.narrowPeak.gz"], "G523 CTCF IP, replicate 2": ["GSM3439931_G523_ctcf_ip_rep2_WRT_G523_ctcf_input_rep2_peaks.narrowPeak.gz"], "G567 CTCF IP, replicate 1": ["GSM3439933_G567_ctcf_ip_rep1_WRT_G567_ctcf_input_rep1_peaks.narrowPeak.gz"], "G567 CTCF IP, replicate 2": ["GSM3439934_G567_ctcf_ip_rep2_WRT_G567_ctcf_input_rep1_peaks.narrowPeak.gz"], "G583 CTCF IP, replicate 1": ["GSM3439936_G583_ctcf_ip_rep1_WRT_G583_ctcf_input_rep1_peaks.narrowPeak.gz"], "G583 CTCF IP, replicate 2": ["GSM3439937_G583_ctcf_ip_rep2_WRT_G583_ctcf_input_rep1_peaks.narrowPeak.gz"], "G523 H3K27ac IP, replicate 1": ["GSM3439939_G523_h3k27_ip_rep1_WRT_G523_h3k27_input_peaks.broadPeak.gz"], "G523 H3K27ac IP, replicate 2": ["GSM3439940_G523_h3k27_ip_rep2_WRT_G523_h3k27_input_peaks.broadPeak.gz"], "G567 H3K27ac IP, replicate 1": ["GSM3439942_G567_h3k27_ip_rep1_WRT_G567_h3k27_input_peaks.broadPeak.gz"], "G567 H3K27ac IP, replicate 2": ["GSM3439943_G567_h3k27_ip_rep2_WRT_G567_h3k27_input_peaks.broadPeak.gz"], "G583 H3K27ac IP, replicate 1": ["GSM3439945_G583_h3k27_ip_rep1_WRT_G583_h3k27_input_rep1_peaks.broadPeak.gz"], "G583 H3K27ac IP, replicate 2": ["GSM3439946_G583_h3k27_ip_rep2_WRT_G583_h3k27_input_rep1_peaks.broadPeak.gz"], "Exp Az-1": ["GSM3762923_Az1.cluster.bed.gz"], "Exp Az-2": ["GSM3762924_Az2.cluster.bed.gz"], "Exp Az-3": ["GSM3762925_Az3.cluster.bed.gz"], "Control B-1": ["GSM3762926_B1.cluster.bed.gz"], "Control B-2": ["GSM3762927_B2.cluster.bed.gz"], "Control B-3": ["GSM3762928_B3.cluster.bed.gz"], "LV1121_donor_H3K27ac": ["GSM3605873_LV1121.replicated.broadPeak.gz"], "LV1160_donor_H3K27ac": ["GSM3605875_LV1160.replicated.broadPeak.gz"], "LV1183_donor_H3K27ac": ["GSM3605877_LV1183.replicated.broadPeak.gz"], "LV1200_donor_H3K27ac": ["GSM3605879_LV1200.replicated.broadPeak.gz"], "LV1202_donor_H3K27ac": ["GSM3605880_LV1202.replicated.broadPeak.gz"], "LV1215_donor_H3K27ac": ["GSM3605882_LV1215.replicated.broadPeak.gz"], "LV1226_donor_H3K27ac": ["GSM3605884_LV1226.replicated.broadPeak.gz"], "LV1248_donor_H3K27ac": ["GSM3605886_LV1248.replicated.broadPeak.gz"], "LV1259_donor_H3K27ac": ["GSM3605888_LV1259.replicated.broadPeak.gz"], "LV1273_donor_H3K27ac": ["GSM3605890_LV1273.replicated.broadPeak.gz"], "LV1277_donor_H3K27ac": ["GSM3605891_LV1277.replicated.broadPeak.gz"], "LV1294_donor_H3K27ac": ["GSM3605893_LV1294.replicated.broadPeak.gz"], "LV1325_donor_H3K27ac": ["GSM3605895_LV1325.replicated.broadPeak.gz"], "LV1356_donor_H3K27ac": ["GSM3605897_LV1356.replicated.broadPeak.gz"], "LV1400_donor_H3K27ac": ["GSM3605899_LV1400.replicated.broadPeak.gz"], "LV1452_donor_H3K27ac": ["GSM3605901_LV1452.replicated.broadPeak.gz"], "LV1471_donor_H3K27ac": ["GSM3605903_LV1471.replicated.broadPeak.gz"], "LV1558_donor_H3K27ac": ["GSM3605904_LV1558.replicated.broadPeak.gz"], "LV1009_explant_H3K27ac": ["GSM3605906_LV1009.replicated.broadPeak.gz"], "LV1028_explant_H3K27ac": ["GSM3605908_LV1028.replicated.broadPeak.gz"], "LV1033_explant_H3K27ac": ["GSM3605910_LV1033.replicated.broadPeak.gz"], "LV1072_explant_H3K27ac": ["GSM3605912_LV1072.replicated.broadPeak.gz"], "LV1223_explant_H3K27ac": ["GSM3605914_LV1223.replicated.broadPeak.gz"], "LV1262_explant_H3K27ac": ["GSM3605916_LV1262.replicated.broadPeak.gz"], "LV1264_explant_H3K27ac": ["GSM3605918_LV1264.replicated.broadPeak.gz"], "LV1275_explant_H3K27ac": ["GSM3605919_LV1275.replicated.broadPeak.gz"], "LV1290_explant_H3K27ac": ["GSM3605921_LV1290.replicated.broadPeak.gz"], "LV1300_explant_H3K27ac": ["GSM3605923_LV1300.replicated.broadPeak.gz"], "LV1304_explant_H3K27ac": ["GSM3605925_LV1304.replicated.broadPeak.gz"], "LV1342_explant_H3K27ac": ["GSM3605927_LV1342.replicated.broadPeak.gz"], "LV1371_explant_H3K27ac": ["GSM3605928_LV1371.replicated.broadPeak.gz"], "LV1392_explant_H3K27ac": ["GSM3605930_LV1392.replicated.broadPeak.gz"], "LV1433_explant_H3K27ac": ["GSM3605932_LV1433.replicated.broadPeak.gz"], "LV1437_explant_H3K27ac": ["GSM3605934_LV1437.replicated.broadPeak.gz"], "LV1532_explant_H3K27ac": ["GSM3605936_LV1532.replicated.broadPeak.gz"], "LV1535_explant_H3K27ac": ["GSM3605937_LV1535.replicated.broadPeak.gz"], "11963_CS22_H3K27ac": ["GSM3605939_11963_CS22.replicated.broadPeak.gz"], "12434_PCW10_H3K27ac": ["GSM3605941_12434_PCW10.replicated.broadPeak.gz"], "12522_PCW10_H3K27ac": ["GSM3605943_12522_PCW10.replicated.broadPeak.gz"], "12569_PCW10_H3K27ac": ["GSM3605945_12569_PCW10.replicated.broadPeak.gz"], "12570_PCW17_H3K27ac": ["GSM3605947_12570_LV_PCW17.replicated.broadPeak.gz"], "1137_H3K27ac": ["GSM6202203_1137.replicated.broadPeak.gz"], "1155_H3K27ac": ["GSM6202204_1155.replicated.broadPeak.gz"], "1167_H3K27ac": ["GSM6202205_1167.replicated.broadPeak.gz"], "1173_H3K27ac": ["GSM6202206_1173.replicated.broadPeak.gz"], "1205_H3K27ac": ["GSM6202207_1205.replicated.broadPeak.gz"], "1211_H3K27ac": ["GSM6202208_1211.replicated.broadPeak.gz"], "1224_H3K27ac": ["GSM6202209_1224.replicated.broadPeak.gz"], "1310_H3K27ac": ["GSM6202210_1310.replicated.broadPeak.gz"], "CENPA_async.TAP": ["GSM3029783_SICER_CENP-A-TAP_RC-2.bed.gz", "GSM3029783_MACS_CENP-A-TAP_RC-1.bed.gz", "GSM3029783_SICER_CENP-A-TAP_RC-1.bed.gz", "GSM3029783_MACS_CENP-A-TAP_RC-2.bed.gz", "GSM3029783_SICER_single_copy_variant_CENP-A-TAP_RC-1.bed.gz", "GSM3029783_SICER_single_copy_variant_CENP-A-TAP_RC-2.bed.gz"], "CENPA_G1.TAP": ["GSM3029784_MACS_CENP-A-TAP_G1-2.bed.gz", "GSM3029784_SICER_CENP-A-TAP_G1.YA5_newInput.bed.gz", "GSM3029784_SICER_CENP-A-TAP_G1.YA2_newInput.bed.gz", "GSM3029784_SICER_single_copy_variant_CENP-A-TAP_G1-1.bed.gz", "GSM3029784_MACS_CENP-A-TAP_G1-1.bed.gz", "GSM3029784_SICER_single_copy_variant_CENP-A-TAP_G1-2.bed.gz"], "CENPA_S_G2.TAP": ["GSM3029785_MACS_CENP-A-TAP_G2-2.bed.gz", "GSM3029785_SICER_single_copy_variant_CENP-A-TAP_G2-2.bed.gz", "GSM3029785_MACS_CENP-A-TAP_G2-1.bed.gz", "GSM3029785_SICER_single_copy_variant_CENP-A-TAP_G2-1.bed.gz", "GSM3029785_SICER_CENP-A-TAP_G2.YA6_newInput.bed.gz", "GSM3029785_SICER_CENP-A-TAP_G2.YA3_newInput.bed.gz"], "H3_async.TAP": ["GSM3029786_MACS_H3.1-TAP-2.bed.gz", "GSM3029786_SICER_H3.1-TAP-1.bed.gz", "GSM3029786_SICER_single_copy_variant_H3.1-TAP_RC-1.bed.gz", "GSM3029786_SICER_single_copy_variant_H3.1-TAP_RC-2.bed.gz", "GSM3029786_SICER_H3.1-TAP-2.bed.gz", "GSM3029786_MACS_H3.1-TAP-1.bed.gz"], "CENPA_async.LAP": ["GSM3029788_SICER_CENP-A-LAP_G1-1.bed.gz", "GSM3029788_SICER_Single_copy_variants_CENP-A-LAP_G1-2.bed.gz", "GSM3029788_SICER_Single_copy_variants_CENP-A-LAP_G1-1.bed.gz", "GSM3029788_MACS_CENP-A-LAP_G1-1.bed.gz", "GSM3029788_SICER_CENP-A-LAP_G1-2.bed.gz", "GSM3029788_MACS_CENP-A-LAP_G1-2.bed.gz"], "CENPA_S_G2.LAP": ["GSM3029789_SICER_CENP-A-LAP_G2.Yael4_newInput.bed.gz", "GSM3029789_MACS_CENP-A-LAP_G2-2.bed.gz", "GSM3029789_SICER_Single_copy_variants_CENP-A-LAP_G2-1.bed.gz", "GSM3029789_SICER_Single_copy_variants_CENP-A-LAP_G2-2.bed.gz", "GSM3029789_SICER_CENP-A-LAP_G2.Yael5_newInput.bed.gz", "GSM3029789_MACS_CENP-A-LAP_G2-1.bed.gz"], "CENPA-TAP_S4.REP": ["GSM3029794_SICER_single_copy_variant_CENP-A-TAP_midS-2.bed.gz", "GSM3029794_SICER_single_copy_variant_CENP-A-TAP_midS-1.bed.gz", "GSM3029794_SICER_CENP-A-TAP_midS-1.bed.gz", "GSM3029794_SICER_CENP-A-TAP_midS-2.bed.gz"], "BrdU_S1_IP.REP": ["GSM3029800_SICER_Repli-seq_BrdU_S1-1.bed.gz", "GSM3029800_SICER_Repli-seq_BrdU_S1-2.bed.gz"], "BrdU_S4_IP.REP": ["GSM3029801_SICER_Repli-seq_BrdU_midS_S4-2.bed.gz", "GSM3029801_SICER_Repli-seq_BrdU_midS_S4-1.bed.gz"], "BrdU_S7_IP.REP": ["GSM3029802_SICER_Repli-seq_BrdU_lateS_S7-1.bed.gz", "GSM3029802_SICER_Repli-seq_BrdU_lateS_S7-2.bed.gz"], "US 1_SMC3 _ChIP-seq": ["GSM3612208_Neutrophil_US_SMC3_ChIPseq_peaks.bed.bz2"], "Ecoli 1_SMC3 _ChIP-seq": ["GSM3612209_Neutrophil_Ecoli_SMC3_ChIPseq_peaks.bed.bz2"], "US 1_RAD21 _ChIP-seq": ["GSM3612211_Neutrophil_US_RAD21_ChIPseq_peaks.bed.bz2"], "PMA 1_RAD21 _ChIP-seq": ["GSM3612213_Neutrophil_PMA_RAD21_ChIPseq_peaks.bed.bz2"], "US 1_CTCF _ChIP-seq": ["GSM3612215_Neutrophil_US_CTCF_ChIPseq_peaks.bed.bz2"], "PMA 1_CTCF _ChIP-seq": ["GSM3612218_Neutrophil_PMA_CTCF_ChIPseq_peaks.bed.bz2"], "Ecoli_CTCF _ChIP-seq": ["GSM3612220_Neutrophil_Ecoli_CTCF_ChIPseq_peaks.bed.bz2"], "US_H3K27ac _ChIP-seq": ["GSM3612221_Neutrophil_US_H3K27ac_ChIPseq_peaks.bed.bz2"], "Ecoli_H3K27ac _ChIP-seq": ["GSM3612222_Neutrophil_Ecoli_H3K27ac_ChIPseq_peaks.bed.bz2"], "US 1_H3K4me1 _ChIP-seq": ["GSM3612223_Neutrophil_US_H3K4me1_ChIPseq_peaks.bed.bz2"], "PMA 1_H3K4me1 _ChIP-seq": ["GSM3612225_Neutrophil_PMA_H3K4me1_ChIPseq_peaks.bed.bz2"], "US 1_H3K4me3 _ChIP-seq": ["GSM3612227_Neutrophil_US_H3K4me3_ChIPseq_peaks.bed.bz2"], "PMA 1_H3K4me3 _ChIP-seq": ["GSM3612229_Neutrophil_PMA_H3K4me3_ChIPseq_peaks.bed.bz2"], "YAP/TAZ ChIP, Control": ["GSM2486582_lane21IP_peaks.Converted.bed.gz", "GSM2486582_lane21IP_peaks.bed.gz"], "YAP/TAZ ChIP, VEGF treatment": ["GSM2486584_lane22IP_peaks.Converted.bed.gz", "GSM2486584_lane22IP_peaks.bed.gz"], "Non-treated GATA2 ChIP Replicate 1": ["GSM3566911_GATA2peaksR1.narrowPeak.gz"], "1 \u00b5M JQ1 GATA2 ChIP Replicate 1": ["GSM3566913_JQ1_GATA2peaksR1.narrowPeak.gz"], "Non-treated GATA2 ChIP Replicate 2": ["GSM3566915_GATA2peaksR2.narrowPeak.gz"], "1 \u00b5M JQ1 GATA2 ChIP Replicate 2": ["GSM3566917_JQ1_GATA2peaksR2.narrowPeak.gz"], "MYBB_r1881_G2- rep.1": ["GSM3560178_MYBB_r1881_G2_1_MACS2_summits.bed.gz"], "MYBB_dsmo_G2- rep.1": ["GSM3560179_MYBB_dmso_G2_1_MACS2_summits.bed.gz"], "MYBB_r1881_G3- rep.2": ["GSM3560180_MYBB_G3_R1881_MACS2_summits.bed.gz"], "MYBB_dsmo_G3- rep.2": ["GSM3560181_MYBB_G3_DMSO_MACS2_summits.bed.gz"], "ASO_CaptureSeq_MCF7_antisense": ["GSM3417007_AsoCaptureSeq_MCF7_antisense_peaks.bed.gz"], "ASO_CaptureSeq_MCF7_sense": ["GSM3417008_AsoCaptureSeq_MCF7_sense_peaks.bed.gz"], "ASO_CaptureSeq_rep1_antisense": ["GSM3417009_AsoCaptureSeq_HelaS3_antisense_peaks.bed.gz"], "ASO_CaptureSeq_rep1_sense": ["GSM3417012_AsoCaptureSeq_HelaS3_sense.bed.gz"], "CaptureSeq_NEAT1_control_rep1": ["GSM3417015_CaptureSeq_NEAT1_TFR1_control.bed.gz", "GSM3417015_CaptureSeq_NEAT1_TFR2_control.bed.gz"], "CaptureSeq_NEAT1_TFR1_rep1": ["GSM3417018_CaptureSeq_NEAT1_TFR1_peaks.bed.gz"], "CaptureSeq_NEAT1_TFR2_rep1": ["GSM3417021_CaptureSeq_NEAT1_TFR2_peaks.bed.gz"], "TriplexDNASeq_rep1_minus_RNA_ligation": ["GSM3417032_TriplexDNASeq_minus_RNA_ligation.bed.gz"], "TriplexDNASeq_rep1_plus_RNA_ligation": ["GSM3417036_TriplexDNASeq_plus_RNA_ligation.bed.gz"], "CTCF - no stress - IP rep1": ["GSM3045107_RAF1_20629_GTCCGC_peaks.narrowPeak.gz"], "CTCF \u2013 7.5min 110 mM NaCl - IP rep1": ["GSM3045108_RAF2_20630_ACTGAT_peaks.narrowPeak.gz"], "CTCF \u2013 1h 110 mM NaCl - IP rep1": ["GSM3045109_RAF3_20631_ATGTCA_peaks.narrowPeak.gz"], "CTCF \u2013 no stress - IP rep2": ["GSM3045110_RAF7_20635_CGATGT_peaks.narrowPeak.gz"], "CTCF \u2013 7.5min 110 mM NaCl - IP rep2": ["GSM3045111_RAF8_20636_TGACCA_peaks.narrowPeak.gz"], "CTCF \u2013 30min 110 mM NaCl - IP rep2": ["GSM3045112_RAF9_20637_CAGATC_peaks.narrowPeak.gz"], "CTCF \u2013 1h 110 mM NaCl - IP rep2": ["GSM3045113_RAF10_20638_CCGTCC_peaks.narrowPeak.gz"], "Pol II - no stress - IP rep1": ["GSM3045121_RAF1_11946_ATCACG_peaks.broadPeak.gz"], "Pol II \u2013 no stress - IP rep2": ["GSM3045122_RAF2_11947_ACTTGA_peaks.broadPeak.gz"], "Pol II \u2013 1h 110 mM NaCl - IP rep1": ["GSM3045123_RAF3_11948_TAGCTT_peaks.broadPeak.gz"], "Pol II \u2013 1h 110 mM NaCl - IP rep2": ["GSM3045124_RAF13_11953_CAGATC_peaks.broadPeak.gz"], "RAD21 \u2013 no stress - IP rep1": ["GSM3045129_FPR_1_peaks.narrowPeak.gz"], "RAD21 \u2013 1h 110 mM NaCl - IP rep1": ["GSM3045130_FPR_2_peaks.narrowPeak.gz"], "RAD21 \u2013 1h 110 mM NaCl + 1h isotonic - IP rep1": ["GSM3045131_FPR_3_peaks.narrowPeak.gz"], "RAD21 \u2013 no stress - IP rep2": ["GSM3045132_FPR_4_peaks.narrowPeak.gz"], "RAD21 \u2013 1h 110 mM NaCl - IP rep2": ["GSM3045133_FPR_5_peaks.narrowPeak.gz"], "RAD21 \u2013 1h 110 mM NaCl + 1h isotonic - IP rep2": ["GSM3045134_FPR_6_peaks.narrowPeak.gz"], "CTCF \u2013 no stress": ["GSM3415544_yc_033_peaks.narrowPeak.gz"], "CTCF \u2013 no stress + triptolide pre-treatment": ["GSM3415545_yc_034_peaks.narrowPeak.gz"], "CTCF \u2013 1h 110 mM NaCl": ["GSM3415546_yc_035_peaks.narrowPeak.gz"], "CTCF \u2013 1h 110 mM NaCl + triptolide": ["GSM3415547_yc_036_peaks.narrowPeak.gz"], "CTCF \u2013 1h 110 mM NaCl + 1h isotonic": ["GSM3415548_yc_037_peaks.narrowPeak.gz"], "CTCF \u2013 1h 110 mM NaCl + 1h isotonic + triptolide pre-treatment": ["GSM3415549_yc_038_peaks.narrowPeak.gz"], "RAD21 \u2013 no stress": ["GSM3415550_yc_039_peaks.narrowPeak.gz"], "RAD21 \u2013 no stress + triptolide": ["GSM3415551_yc_040_peaks.narrowPeak.gz"], "RAD21 \u2013 1h 110 mM NaCl": ["GSM3415552_yc_041_peaks.narrowPeak.gz"], "RAD21 \u2013 1h 110 mM NaCl + triptolide": ["GSM3415553_yc_042_peaks.narrowPeak.gz"], "RAD21 \u2013 1h 110 mM NaCl + 1h isotonic": ["GSM3415554_yc_043_peaks.narrowPeak.gz"], "RAD21 \u2013 1h 110 mM NaCl + 1h isotonic + triptolide pre-treatment": ["GSM3415555_yc_044_peaks.narrowPeak.gz"], "GM ChIP CTCF yc_001_01_01_chipseq": ["GSM3417113_yc_001_01_01_chipseq_peaks.narrowPeak.gz"], "T47D ChIP-ER Red medium fd_023_01_01_chipseq": ["GSM3417114_fd_023_01_01_chipseq_peaks.narrowPeak.gz"], "T47D ChIP-ER Day 2 fd_024_01_01_chipseq": ["GSM3417115_fd_024_01_01_chipseq_peaks.narrowPeak.gz"], "T47D ChIP-ER Day 12 fd_025_01_01_chipseq": ["GSM3417116_fd_025_01_01_chipseq_peaks.narrowPeak.gz"], "T47D ChIP-BRD4 T0 fd_027_01_01_chipseq": ["GSM3417117_fd_027_01_01_chipseq_peaks.narrowPeak.gz"], "T47D ChIP-BRD4 R30 fd_028_01_01_chipseq": ["GSM3417118_fd_028_01_01_chipseq_peaks.narrowPeak.gz"], "T47D ChIP-H3K27ac T0 fd_033_01_01_chipseq": ["GSM3417119_fd_033_01_01_chipseq_peaks.narrowPeak.gz"], "T47D ChIP-H3K27ac R30 fd_034_01_01_chipseq": ["GSM3417120_fd_034_01_01_chipseq_peaks.narrowPeak.gz"], "MCF7 ER T0 gv_001_02_01_chipseq": ["GSM3417121_gv_001_02_01_chipseq_peaks.narrowPeak.gz"], "MCF7 PR T0 gv_003_01_01_chipseq": ["GSM3417122_gv_003_01_01_chipseq_peaks.narrowPeak.gz"], "MCF7 PR T30 R5020 gv_004_01_01_chipseq": ["GSM3417123_gv_004_01_01_chipseq_peaks.narrowPeak.gz"], "MCF7 ER T30 E2 gv_005_01_01_chipseq": ["GSM3417124_gv_005_01_01_chipseq_peaks.narrowPeak.gz"], "T47D Pol II T0 gv_071_01_01_chipseq": ["GSM3417125_gv_071_01_01_chipseq_peaks.narrowPeak.gz"], "T47D Pol II T60 gv_072_01_01_chipseq": ["GSM3417126_gv_072_01_01_chipseq_peaks.narrowPeak.gz"], "T47D BRD4 T0 gv_104_01_01_chipseq": ["GSM3417127_gv_104_01_01_chipseq_peaks.narrowPeak.gz"], "T47D BRD4 T30 gv_105_01_01_chipseq": ["GSM3417128_gv_105_01_01_chipseq_peaks.narrowPeak.gz"], "T47D H3K27ac T0 gv_114_01_01_chipseq": ["GSM3417129_gv_114_01_01_chipseq_peaks.narrowPeak.gz"], "T47D H3K27ac T30 gv_115_01_01_chipseq": ["GSM3417130_gv_115_01_01_chipseq_peaks.narrowPeak.gz"], "ChIP-Seq POL2 T0 rf_086_01_01_chipseq": ["GSM3417131_rf_086_01_01_chipseq_peaks.narrowPeak.gz"], "ChIP-Seq POL2 T660 R5020 rf_087_01_01_chipseq": ["GSM3417132_rf_087_01_01_chipseq_peaks.narrowPeak.gz"], "ChIP_A": ["GSM3462427_180409_ChIP_A1_HN_D34.peak.bed.gz"], "ChIP_B": ["GSM3462428_180423_ChIP_B1_HN_D34.peak.bed.gz"], "WT_H3K9me3_ChIPSeq": ["GSM3440914_WT_H3K9me3_ChIPSeq_peaks.bed.gz"], "shKDM4B_H3K9me3_ChIPSeq": ["GSM3440915_shKDM4B_H3K9me3_ChIPSeq_peaks.bed.gz"], "KDM4B_H3K9me3_ChIPSeq": ["GSM3440916_KDM4B_H3K9me3_ChIPSeq_peaks.bed.gz"], "Human6_ChIP_Pol2_Mock_24h": ["GSM3324461_Human6_Pol2_mock_24h_regions.bed.gz"], "Human6_ChIP_Pol2_ZIKVnegative_24h": ["GSM3324462_Human6_Pol2_ZIKVneg_24h_regions.bed.gz"], "Human6_ChIP_Pol2_ZIKVpositive_24h": ["GSM3324463_Human6_Pol2_ZIKVpos_24h_regions.bed.gz"], "Human7_ChIP_Pol2_Mock_24h": ["GSM3324464_Human7_Pol2_mock_24h_regions.bed.gz"], "Human7_ChIP_Pol2_ZIKVnegative_24h": ["GSM3324465_Human7_Pol2_ZIKVneg_24h_regions.bed.gz"], "Human7_ChIP_Pol2_ZIKVpositive_24h": ["GSM3324466_Human7_Pol2_ZIKVpos_24h_regions.bed.gz"], "Human7_ChIP_H3K27Ac_Mock_24h": ["GSM3324468_Human7_H3K27ac_mock_24h_regions.bed.gz"], "Human7_ChIP_H3K27Ac_ZIKVnegative_24h": ["GSM3324469_Human7_H3K27ac_ZIKVneg_24h_regions.bed.gz"], "Human7_ChIP_H3K27Ac_ZIKVpositive_24h": ["GSM3324470_Human7_H3K27ac_ZIKVpos_24h_regions.bed.gz"], "Human8_ChIP_H3K27Ac_Mock_24h": ["GSM3324472_Human8_H3K27ac_mock_24h_regions.bed.gz"], "Human8_ChIP_H3K27Ac_ZIKVnegative_24h": ["GSM3324473_Human8_H3K27ac_ZIKVneg_24h_regions.bed.gz"], "Human8_ChIP_H3K27Ac_ZIKVpositive_24h": ["GSM3324474_Human8_H3K27ac_ZIKVpos_24h_regions.bed.gz"], "Human9_ChIP_H3K27Ac_Mock_24h": ["GSM3324475_Human9_H3K27ac_mock_24h_regions.bed.gz"], "Human9_ChIP_H3K27Ac_ZIKVnegative_24h": ["GSM3324476_Human9_H3K27ac_ZIKVneg_24h_regions.bed.gz"], "Human9_ChIP_H3K27Ac_ZIKVpositive_24h": ["GSM3324477_Human9_H3K27ac_ZIKVpos_24h_regions.bed.gz"], "Human10_ChIP_CTCF_Mock_24h": ["GSM3324478_Human10_CTCF_mock_24h_peaks.bed.gz"], "Human10_ChIP_CTCF_ZIKVnegative_24h": ["GSM3324479_Human10_CTCF_ZIKVneg_24h_peaks.bed.gz"], "Human10_ChIP_CTCF_ZIKVpositive_24h": ["GSM3324480_Human10_CTCF_ZIKVpos_24h_peaks.bed.gz"], "Human10_ChIP_Pol2_Mock_24h": ["GSM3324484_Human10_Pol2_mock_24h_regions.bed.gz"], "Human10_ChIP_Pol2_ZIKVnegative_24h": ["GSM3324485_Human10_Pol2_ZIKVneg_24h_regions.bed.gz"], "Human10_ChIP_Pol2_ZIKVpositive_24h": ["GSM3324486_Human10_Pol2_ZIKVpos_24h_regions.bed.gz"], "Synaptic-32ug_IP": ["GSM3204805_Synaptic_32ug_peaks_sorted_named.bed.gz"], "NEB-32ug_IP": ["GSM3204806_NEB_32ug_peaks_sorted_named.bed.gz"], "Millipore-32ug_IP": ["GSM3204807_Millipore_32ug_peaks_sorted_named.bed.gz"], "Millipore-12ug_IP": ["GSM3204808_Millipore_12ug_peaks_sorted_named.bed.gz"], "Millipore-6ug_IP": ["GSM3204809_Millipore_6ug_peaks_sorted_named.bed.gz"], "Millipore-2ug_IP": ["GSM3204810_Millipore_2ug_peaks_sorted_named.bed.gz"], "Millipore-500ng_IP_Rep1": ["GSM3204811_Millipore_500ng_peaks_sorted_named_Rep1.bed.gz"], "Millipore-500ng_IP_Rep2": ["GSM3204813_Millipore_500ng_peaks_sorted_named_Rep2.bed.gz"], "tumor1_IP": ["GSM3204815_tumor1_peaks_sorted_named.bed.gz"], "tumor2_IP": ["GSM3204817_tumor2_peaks_sorted_named.bed.gz"], "TRP47": ["GSM3330435_TRP47-1_Serum_peaks.narrowPeak.gz"], "CTCF ChIP-Nexus": ["GSM2816644_CTCF_ChIPNexus_peaks.bed.gz"], "HS CTCF ChIP-Nexus": ["GSM2816645_HS_CTCF_ChIPNexus_peaks.bed.gz"], "Rad21 ChIP-Nexus": ["GSM2816646_Rad21_ChIPNexus_peaks.bed.gz"], "HS Rad21 ChIP-Nexus": ["GSM2816647_HS_Rad21_ChIPNexus_peaks.bed.gz"], "NONO PARCLIP U2OS": ["GSM3104132_NONO_2_U2OS_C6GR9ANXX_AGTTCC_L007_HRR0000003_R1.fastq.noadapt_m20_q2020.hg38_bowtie_v1_m1.filtered.sam.collapsed.PARalyzer_result.bed.all.bed.gz"], "SFPQ PARCLIP U2OS": ["GSM3104133_SFPQ_2_U2OS_C6GR9ANXX_GTCCGC_L007_HRR0000007_R1.fastq.noadapt_m20_q2020.hg38_bowtie_v1_m1.filtered.sam.collapsed.PARalyzer_result.bed.all.bed.gz"], "NONO PARCLIP HeLa": ["GSM3104134_NONO_HeLa_2014_C5N7WANXX_CTATAC_L008_HRR0000005_R1.fastq.noadapt_m20_q2020.hg38_bowtie_v1_m1.filtered.sam.collapsed.PARalyzer_result.bed.all.bed.gz"], "SFPQ PARCLIP HeLa": ["GSM3104135_SFPQ_HeLa_2014_C5N7WANXX_CTCAGA_L008_HRR0000009_R1.fastq.noadapt_m20_q2020.hg38_bowtie_v1_m1.filtered.sam.collapsed.PARalyzer_result.bed.all.bed.gz"], "8W_male_rep1": ["GSM2966960_8W_male_keep.rpkm3.bed.gz"], "8W_male_soma_rep1": ["GSM2966962_8W_male_soma.rpkm3.bed.gz"], "10W_female_rep1": ["GSM2966964_10W_female_keep.rpkm3.bed.gz"], "10W_female_soma_rep1": ["GSM2966966_10W_female_soma.rpkm3.bed.gz"], "11W_male_soma_rep1": ["GSM2966968_11W_male_soma.rpkm3.bed.gz"], "12W_female_rep1": ["GSM2966970_12W_female_keep.rpkm3.bed.gz"], "13W_male_rep1": ["GSM2966972_13W_male_keep.rpkm3.bed.gz"], "13W_male_soma_rep1": ["GSM2966974_13W_male_soma.rpkm3.bed.gz"], "15W_female_rep1": ["GSM2966976_15W_female_keep.rpkm3.bed.gz"], "15W_female_soma_rep1": ["GSM2966978_15W_female_soma.rpkm3.bed.gz"], "21W_female_rep1": ["GSM2966980_21W_female_keep.rpkm3.bed.gz"], "21W_male_rep1": ["GSM2966981_21W_male_keep.rpkm3.bed.gz"], "RRBS Normal white matter control ind_112 Surg.N/A FFPE [ind_112_N1471_11A]": ["GSM2679023_ind_112_N1471_11A_cpgmeth.bed.gz"], "RRBS Normal white matter control ind_113 Surg.N/A FFPE [ind_113_N61_15D]": ["GSM2679024_ind_113_N61_15D_cpgmeth.bed.gz"], "RRBS Normal white matter control ind_114 Surg.N/A FFPE [ind_114_N321_15C]": ["GSM2679025_ind_114_N321_15C_cpgmeth.bed.gz"], "RRBS Normal white matter control ind_115 Surg.N/A FFPE [ind_115_N912_12F]": ["GSM2679026_ind_115_N912_12F_cpgmeth.bed.gz"], "RRBS Normal white matter control ind_116 Surg.N/A FFPE [ind_116_N1783_14]": ["GSM2679027_ind_116_N1783_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_001 Surg.1 FFPE [pat_001_N1168_05A]": ["GSM2679028_pat_001_N1168_05A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_001 Surg.2 FFPE [pat_001_N1677_06]": ["GSM2679029_pat_001_N1677_06_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_002 Surg.2 FFPE [pat_002_N1025_10]": ["GSM2679030_pat_002_N1025_10_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_002 Surg.2 RCL [pat_002_N1025_10_rk]": ["GSM2679031_pat_002_N1025_10_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_002 Surg.1 FFPE [pat_002_N380_09B]": ["GSM2679032_pat_002_N380_09B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_003 Surg.1 FFPE [pat_003_N1109_10]": ["GSM2679033_pat_003_N1109_10_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_003 Surg.1 RCL [pat_003_N1109_10_rk]": ["GSM2679034_pat_003_N1109_10_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_003 Surg.2 FFPE [pat_003_N1734_10]": ["GSM2679035_pat_003_N1734_10_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_004 Surg.2 FFPE [pat_004_N1420_08]": ["GSM2679036_pat_004_N1420_08_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_004 Surg.2 RCL [pat_004_N1420_08_rk]": ["GSM2679037_pat_004_N1420_08_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_005 Surg.1 FFPE [pat_005_N1202_15]": ["GSM2679039_pat_005_N1202_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_005 Surg.2 FFPE [pat_005_N1203_15]": ["GSM2679040_pat_005_N1203_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_006 Surg.1 FFPE [pat_006_N1230_15]": ["GSM2679041_pat_006_N1230_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_006 Surg.2 FFPE [pat_006_N1231_15]": ["GSM2679042_pat_006_N1231_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_007 Surg.1 FFPE [pat_007_N1197_15]": ["GSM2679043_pat_007_N1197_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_007 Surg.2 FFPE [pat_007_N1198_15]": ["GSM2679044_pat_007_N1198_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_008 Surg.1 FFPE [pat_008_N1250_15]": ["GSM2679045_pat_008_N1250_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_008 Surg.1 FFPE [pat_008_N1250_15_I]": ["GSM2679046_pat_008_N1250_15_I_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_008 Surg.1 FFPE [pat_008_N1250_15_II]": ["GSM2679047_pat_008_N1250_15_II_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_008 Surg.1 FFPE [pat_008_N1250_15_III]": ["GSM2679048_pat_008_N1250_15_III_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_008 Surg.2 FFPE [pat_008_N1252_15A_I]": ["GSM2679050_pat_008_N1252_15A_I_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_008 Surg.2 FFPE [pat_008_N1252_15A_II]": ["GSM2679051_pat_008_N1252_15A_II_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_008 Surg.2 FFPE [pat_008_N1252_15A_III]": ["GSM2679052_pat_008_N1252_15A_III_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_009 Surg.1 FFPE [pat_009_N708_15]": ["GSM2679053_pat_009_N708_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_009 Surg.2 FFPE [pat_009_N709_15]": ["GSM2679054_pat_009_N709_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_010 Surg.3 FFPE [pat_010_N1222_15]": ["GSM2679056_pat_010_N1222_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_010 Surg.1 FFPE [pat_010_N1436_06]": ["GSM2679057_pat_010_N1436_06_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_011 Surg.1 FFPE [pat_011_N1199_15B]": ["GSM2679058_pat_011_N1199_15B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_011 Surg.1 FFPE [pat_011_N1199_15B_I]": ["GSM2679059_pat_011_N1199_15B_I_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_011 Surg.1 FFPE [pat_011_N1199_15B_II]": ["GSM2679060_pat_011_N1199_15B_II_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_011 Surg.1 FFPE [pat_011_N1199_15_BIII]": ["GSM2679061_pat_011_N1199_15_BIII_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_011 Surg.2 FFPE [pat_011_N1200_15]": ["GSM2679062_pat_011_N1200_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_011 Surg.2 FFPE [pat_011_N1200_15_I]": ["GSM2679063_pat_011_N1200_15_I_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_011 Surg.2 FFPE [pat_011_N1200_15_II]": ["GSM2679064_pat_011_N1200_15_II_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_011 Surg.2 FFPE [pat_011_N1200_15_III]": ["GSM2679065_pat_011_N1200_15_III_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_011 Surg.3 FFPE [pat_011_N1201_15]": ["GSM2679066_pat_011_N1201_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_011 Surg.3 FFPE [pat_011_N1201_15_I]": ["GSM2679067_pat_011_N1201_15_I_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_011 Surg.3 FFPE [pat_011_N1201_15_II]": ["GSM2679068_pat_011_N1201_15_II_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_011 Surg.3 FFPE [pat_011_N1201_15_III]": ["GSM2679069_pat_011_N1201_15_III_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_012 Surg.1 FFPE [pat_012_N1218_15]": ["GSM2679070_pat_012_N1218_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_012 Surg.1 FFPE [pat_012_N1218_15_I]": ["GSM2679071_pat_012_N1218_15_I_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_012 Surg.1 FFPE [pat_012_N1218_15_II]": ["GSM2679072_pat_012_N1218_15_II_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_012 Surg.1 FFPE [pat_012_N1218_15_III]": ["GSM2679073_pat_012_N1218_15_III_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_012 Surg.2 FFPE [pat_012_N1219_15_I]": ["GSM2679075_pat_012_N1219_15_I_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_012 Surg.2 FFPE [pat_012_N1219_15_II]": ["GSM2679076_pat_012_N1219_15_II_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_012 Surg.3 FFPE [pat_012_N1220_15]": ["GSM2679077_pat_012_N1220_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_012 Surg.3 FFPE [pat_012_N1220_15_I]": ["GSM2679078_pat_012_N1220_15_I_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_012 Surg.3 FFPE [pat_012_N1220_15_II]": ["GSM2679079_pat_012_N1220_15_II_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_012 Surg.3 FFPE [pat_012_N1220_15_III]": ["GSM2679080_pat_012_N1220_15_III_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_013 Surg.1 FFPE [pat_013_N1237_15]": ["GSM2679081_pat_013_N1237_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_013 Surg.2 FFPE [pat_013_N1238_15]": ["GSM2679082_pat_013_N1238_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_013 Surg.3 FFPE [pat_013_N1239_15]": ["GSM2679083_pat_013_N1239_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_014 Surg.1 FFPE [pat_014_N2462_14]": ["GSM2679084_pat_014_N2462_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_014 Surg.2 FFPE [pat_014_N2463_14]": ["GSM2679085_pat_014_N2463_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_014 Surg.4 FFPE [pat_014_N2465_14A]": ["GSM2679087_pat_014_N2465_14A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_015 Surg.1 FFPE [pat_015_N139_03C]": ["GSM2679089_pat_015_N139_03C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_015 Surg.3 FFPE [pat_015_N386_06]": ["GSM2679090_pat_015_N386_06_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_016 Surg.2 FFPE [pat_016_N1248_04]": ["GSM2679091_pat_016_N1248_04_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_016 Surg.3 FFPE [pat_016_N465_05C]": ["GSM2679092_pat_016_N465_05C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_017 Surg.1 FFPE [pat_017_N1223_15]": ["GSM2679094_pat_017_N1223_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_017 Surg.3 FFPE [pat_017_N1225_15A]": ["GSM2679096_pat_017_N1225_15A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_018 Surg.1 FFPE [pat_018_N1232_15]": ["GSM2679097_pat_018_N1232_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_018 Surg.2 FFPE [pat_018_N1233_15]": ["GSM2679098_pat_018_N1233_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_018 Surg.3 FFPE [pat_018_N1234_15]": ["GSM2679099_pat_018_N1234_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_019 Surg.3 FFPE [pat_019_N2491_14]": ["GSM2679102_pat_019_N2491_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_020 Surg.1 FFPE [pat_020_N1180_10]": ["GSM2679103_pat_020_N1180_10_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_020 Surg.1 RCL [pat_020_N1180_10_rk]": ["GSM2679104_pat_020_N1180_10_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_020 Surg.2 FFPE [pat_020_N1317_12]": ["GSM2679105_pat_020_N1317_12_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_020 Surg.2 RCL [pat_020_N1317_12_rk]": ["GSM2679106_pat_020_N1317_12_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_021 Surg.1 FFPE [pat_021_N1593_12]": ["GSM2679109_pat_021_N1593_12_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_021 Surg.2 frozen [pat_021_N845_13_f]": ["GSM2679111_pat_021_N845_13_f_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_022 Surg.2 FFPE [pat_022_N1518_07A]": ["GSM2679112_pat_022_N1518_07A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_022 Surg.1 FFPE [pat_022_N719_07]": ["GSM2679113_pat_022_N719_07_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_023 Surg.2 FFPE [pat_023_N1735_09]": ["GSM2679114_pat_023_N1735_09_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_023 Surg.1 FFPE [pat_023_N893_08]": ["GSM2679115_pat_023_N893_08_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_024 Surg.1 FFPE [pat_024_N1132_12B]": ["GSM2679117_pat_024_N1132_12B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_024 Surg.2 FFPE [pat_024_N1844_13B]": ["GSM2679118_pat_024_N1844_13B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_024 Surg.2 RCL [pat_024_N1844_13_rk]": ["GSM2679120_pat_024_N1844_13_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_025 Surg.2 FFPE [pat_025_N259_08]": ["GSM2679121_pat_025_N259_08_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_025 Surg.1 FFPE [pat_025_N531_07]": ["GSM2679122_pat_025_N531_07_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_026 Surg.2 FFPE [pat_026_N1814_09A]": ["GSM2679123_pat_026_N1814_09A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_026 Surg.2 RCL [pat_026_N1814_09_rk]": ["GSM2679124_pat_026_N1814_09_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_026 Surg.1 FFPE [pat_026_N554_03B]": ["GSM2679125_pat_026_N554_03B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_027 Surg.2 FFPE [pat_027_N1154_13]": ["GSM2679126_pat_027_N1154_13_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_027 Surg.1 FFPE [pat_027_N886_12]": ["GSM2679128_pat_027_N886_12_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_027 Surg.1 frozen [pat_027_N886_12_f]": ["GSM2679129_pat_027_N886_12_f_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_027 Surg.1 RCL [pat_027_N886_12_rk]": ["GSM2679130_pat_027_N886_12_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_028 Surg.2 FFPE [pat_028_N1165_14A]": ["GSM2679131_pat_028_N1165_14A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_028 Surg.2 RCL [pat_028_N1165_14_rk]": ["GSM2679132_pat_028_N1165_14_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_028 Surg.1 FFPE [pat_028_N853_13A]": ["GSM2679133_pat_028_N853_13A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_029 Surg.1 FFPE [pat_029_N127_05A]": ["GSM2679134_pat_029_N127_05A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_029 Surg.2 FFPE [pat_029_N536_07]": ["GSM2679135_pat_029_N536_07_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_030 Surg.1 FFPE [pat_030_N2441_14C]": ["GSM2679136_pat_030_N2441_14C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_030 Surg.2 FFPE [pat_030_N918_15]": ["GSM2679137_pat_030_N918_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_031 Surg.2 FFPE [pat_031_N1267_07_rr]": ["GSM2679138_pat_031_N1267_07_rr_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_031 Surg.1 FFPE [pat_031_N441_06]": ["GSM2679139_pat_031_N441_06_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_032 Surg.2 FFPE [pat_032_N1404_13]": ["GSM2679140_pat_032_N1404_13_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_033 Surg.1 FFPE [pat_033_N1161_06]": ["GSM2679144_pat_033_N1161_06_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_034 Surg.1 FFPE [pat_034_N225_06]": ["GSM2679147_pat_034_N225_06_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_035 Surg.2 FFPE [pat_035_N1279_14A]": ["GSM2679148_pat_035_N1279_14A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_035 Surg.1 FFPE [pat_035_N1649_12]": ["GSM2679149_pat_035_N1649_12_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_036 Surg.2 FFPE [pat_036_N861_08A]": ["GSM2679150_pat_036_N861_08A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_036 Surg.2 FFPE [pat_036_N861_08AI]": ["GSM2679151_pat_036_N861_08AI_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_036 Surg.1 FFPE [pat_036_N986_07A]": ["GSM2679154_pat_036_N986_07A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_036 Surg.1 FFPE [pat_036_N986_07CI]": ["GSM2679155_pat_036_N986_07CI_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_036 Surg.1 FFPE [pat_036_N986_07CII]": ["GSM2679156_pat_036_N986_07CII_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_036 Surg.1 FFPE [pat_036_N986_07CIII]": ["GSM2679157_pat_036_N986_07CIII_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_037 Surg.1 FFPE [pat_037_N1059_07A]": ["GSM2679158_pat_037_N1059_07A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_037 Surg.2 FFPE [pat_037_N369_08]": ["GSM2679159_pat_037_N369_08_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_038 Surg.2 FFPE [pat_038_N225_09]": ["GSM2679160_pat_038_N225_09_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_038 Surg.2 RCL [pat_038_N225_09_rk]": ["GSM2679161_pat_038_N225_09_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_038 Surg.1 FFPE [pat_038_N969_08]": ["GSM2679162_pat_038_N969_08_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_040 Surg.1 FFPE [pat_040_N1510_11]": ["GSM2679165_pat_040_N1510_11_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_040 Surg.2 RCL [pat_040_N173_14_rk]": ["GSM2679166_pat_040_N173_14_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_040 Surg.2 FFPE [pat_040_N174_14v]": ["GSM2679167_pat_040_N174_14v_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_041 Surg.2 FFPE [pat_041_N1388_04]": ["GSM2679168_pat_041_N1388_04_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_041 Surg.1 FFPE [pat_041_N623_04]": ["GSM2679169_pat_041_N623_04_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_042 Surg.2 FFPE [pat_042_N417_14]": ["GSM2679170_pat_042_N417_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_042 Surg.2 frozen [pat_042_N417_14_f]": ["GSM2679171_pat_042_N417_14_f_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_042 Surg.2 RCL [pat_042_N417_14_rk]": ["GSM2679172_pat_042_N417_14_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_042 Surg.1 FFPE [pat_042_N721_13B]": ["GSM2679173_pat_042_N721_13B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_042 Surg.1 frozen [pat_042_N721_13_f]": ["GSM2679174_pat_042_N721_13_f_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_042 Surg.1 RCL [pat_042_N721_13_rk]": ["GSM2679175_pat_042_N721_13_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_043 Surg.1 FFPE [pat_043_N490_13B]": ["GSM2679176_pat_043_N490_13B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_043 Surg.2 RCL [pat_043_N656_15_rk]": ["GSM2679177_pat_043_N656_15_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_044 Surg.1 FFPE [pat_044_N669_06I]": ["GSM2679180_pat_044_N669_06I_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_044 Surg.1 FFPE [pat_044_N669_06III]": ["GSM2679182_pat_044_N669_06III_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_044 Surg.2 FFPE [pat_044_N820_07C]": ["GSM2679183_pat_044_N820_07C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_044 Surg.2 FFPE [pat_044_N820_07CI]": ["GSM2679184_pat_044_N820_07CI_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_044 Surg.2 FFPE [pat_044_N820_07CII]": ["GSM2679185_pat_044_N820_07CII_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_044 Surg.2 FFPE [pat_044_N820_07CIII]": ["GSM2679186_pat_044_N820_07CIII_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_045 Surg.1 FFPE [pat_045_N2446_14]": ["GSM2679187_pat_045_N2446_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_045 Surg.2 FFPE [pat_045_N2447_14A]": ["GSM2679188_pat_045_N2447_14A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_046 Surg.1 FFPE [pat_046_N2448_14]": ["GSM2679189_pat_046_N2448_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_046 Surg.2 FFPE [pat_046_N2449_14]": ["GSM2679190_pat_046_N2449_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_047 Surg.1 FFPE [pat_047_N2450_14]": ["GSM2679191_pat_047_N2450_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_047 Surg.2 FFPE [pat_047_N2451_14]": ["GSM2679192_pat_047_N2451_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_048 Surg.1 FFPE [pat_048_N2452_14]": ["GSM2679193_pat_048_N2452_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_049 Surg.1 FFPE [pat_049_N2454_14]": ["GSM2679195_pat_049_N2454_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_049 Surg.2 FFPE [pat_049_N2455_14A]": ["GSM2679196_pat_049_N2455_14A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_050 Surg.1 FFPE [pat_050_N2456_14]": ["GSM2679197_pat_050_N2456_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_050 Surg.2 FFPE [pat_050_N2457_14]": ["GSM2679198_pat_050_N2457_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_051 Surg.1 FFPE [pat_051_N2460_14]": ["GSM2679199_pat_051_N2460_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_052 Surg.1 FFPE [pat_052_N2477_14]": ["GSM2679201_pat_052_N2477_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_052 Surg.2 FFPE [pat_052_N2478_14]": ["GSM2679202_pat_052_N2478_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_053 Surg.2 FFPE [pat_053_N2482_14A]": ["GSM2679204_pat_053_N2482_14A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_054 Surg.1 FFPE [pat_054_N2487_14A]": ["GSM2679205_pat_054_N2487_14A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_054 Surg.2 FFPE [pat_054_N2488_14]": ["GSM2679206_pat_054_N2488_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_055 Surg.1 FFPE [pat_055_N1180_15]": ["GSM2679207_pat_055_N1180_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_055 Surg.2 FFPE [pat_055_N1181_15]": ["GSM2679208_pat_055_N1181_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_055 Surg.3 FFPE [pat_055_N1182_15]": ["GSM2679209_pat_055_N1182_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_056 Surg.1 FFPE [pat_056_N1186_15]": ["GSM2679210_pat_056_N1186_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_056 Surg.2 FFPE [pat_056_N1187_15]": ["GSM2679211_pat_056_N1187_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_057 Surg.1 FFPE [pat_057_N1188_15]": ["GSM2679212_pat_057_N1188_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_057 Surg.2 FFPE [pat_057_N1189_15A]": ["GSM2679213_pat_057_N1189_15A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_057 Surg.3 FFPE [pat_057_N1190_15]": ["GSM2679214_pat_057_N1190_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_058 Surg.1 FFPE [pat_058_N1191_15]": ["GSM2679215_pat_058_N1191_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_058 Surg.2 FFPE [pat_058_N1192_15]": ["GSM2679216_pat_058_N1192_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_059 Surg.1 FFPE [pat_059_N1195_15]": ["GSM2679217_pat_059_N1195_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_059 Surg.2 FFPE [pat_059_N1196_15]": ["GSM2679218_pat_059_N1196_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_060 Surg.1 FFPE [pat_060_N1204_15]": ["GSM2679219_pat_060_N1204_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_060 Surg.2 FFPE [pat_060_N1205_15]": ["GSM2679220_pat_060_N1205_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_061 Surg.1 FFPE [pat_061_N1206_15]": ["GSM2679221_pat_061_N1206_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_061 Surg.2 FFPE [pat_061_N1207_15]": ["GSM2679222_pat_061_N1207_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_062 Surg.1 FFPE [pat_062_N1208_15_B]": ["GSM2679223_pat_062_N1208_15_B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_062 Surg.2 FFPE [pat_062_N1209_15]": ["GSM2679224_pat_062_N1209_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_063 Surg.2 FFPE [pat_063_M1211_15]": ["GSM2679225_pat_063_M1211_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_063 Surg.1 FFPE [pat_063_N1210_15_B]": ["GSM2679226_pat_063_N1210_15_B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_064 Surg.1 FFPE [pat_064_N1212_15]": ["GSM2679227_pat_064_N1212_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_064 Surg.2 FFPE [pat_064_N1213_15]": ["GSM2679228_pat_064_N1213_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_065 Surg.1 FFPE [pat_065_N1226_15]": ["GSM2679229_pat_065_N1226_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_065 Surg.2 FFPE [pat_065_N1227_15]": ["GSM2679230_pat_065_N1227_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_066 Surg.1 FFPE [pat_066_N1228_15]": ["GSM2679231_pat_066_N1228_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_066 Surg.2 FFPE [pat_066_N1229_15_A]": ["GSM2679232_pat_066_N1229_15_A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_067 Surg.1 FFPE [pat_067_N1235_15_A]": ["GSM2679233_pat_067_N1235_15_A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_067 Surg.2 FFPE [pat_067_N1236_15]": ["GSM2679234_pat_067_N1236_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_068 Surg.1 FFPE [pat_068_N1241_15]": ["GSM2679235_pat_068_N1241_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_068 Surg.2 FFPE [pat_068_N1242_15_A]": ["GSM2679236_pat_068_N1242_15_A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_069 Surg.1 FFPE [pat_069_N1243_15]": ["GSM2679237_pat_069_N1243_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_069 Surg.2 FFPE [pat_069_N1245_15]": ["GSM2679238_pat_069_N1245_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_070 Surg.1 FFPE [pat_070_N1246_15]": ["GSM2679239_pat_070_N1246_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_070 Surg.2 FFPE [pat_070_N1247_15]": ["GSM2679240_pat_070_N1247_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_071 Surg.1 FFPE [pat_071_N2362_15]": ["GSM2679241_pat_071_N2362_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_071 Surg.2 FFPE [pat_071_N2363_15_C]": ["GSM2679242_pat_071_N2363_15_C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_072 Surg.1 FFPE [pat_072_N2367_15]": ["GSM2679243_pat_072_N2367_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_072 Surg.1 FFPE [pat_072_N2367_15I]": ["GSM2679244_pat_072_N2367_15I_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_072 Surg.1 FFPE [pat_072_N2367_15II]": ["GSM2679245_pat_072_N2367_15II_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_072 Surg.1 FFPE [pat_072_N2367_15III]": ["GSM2679246_pat_072_N2367_15III_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_072 Surg.2 FFPE [pat_072_N2368_15]": ["GSM2679247_pat_072_N2368_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_072 Surg.2 FFPE [pat_072_N2368_15I]": ["GSM2679248_pat_072_N2368_15I_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_072 Surg.2 FFPE [pat_072_N2368_15_II]": ["GSM2679249_pat_072_N2368_15_II_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_072 Surg.2 FFPE [pat_072_N2368_15_III]": ["GSM2679250_pat_072_N2368_15_III_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_073 Surg.1 FFPE [pat_073_N2371_15_B]": ["GSM2679251_pat_073_N2371_15_B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_073 Surg.2 FFPE [pat_073_N2372_15]": ["GSM2679252_pat_073_N2372_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_074 Surg.1 FFPE [pat_074_N2373_15]": ["GSM2679253_pat_074_N2373_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_074 Surg.2 FFPE [pat_074_N2374_15]": ["GSM2679254_pat_074_N2374_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_074 Surg.3 FFPE [pat_074_N2375_15]": ["GSM2679255_pat_074_N2375_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_075 Surg.1 FFPE [pat_075_N2376_15]": ["GSM2679256_pat_075_N2376_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_075 Surg.2 FFPE [pat_075_N2377_15]": ["GSM2679257_pat_075_N2377_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_076 Surg.1 FFPE [pat_076_N1315_11_B]": ["GSM2679258_pat_076_N1315_11_B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_076 Surg.2 FFPE [pat_076_N2378_15]": ["GSM2679259_pat_076_N2378_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_077 Surg.1 FFPE [pat_077_N2380_15_C]": ["GSM2679260_pat_077_N2380_15_C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_077 Surg.2 FFPE [pat_077_N2381_15]": ["GSM2679261_pat_077_N2381_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_077 Surg.3 FFPE [pat_077_N2382_15]": ["GSM2679262_pat_077_N2382_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_078 Surg.1 FFPE [pat_078_N2383_15]": ["GSM2679263_pat_078_N2383_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_078 Surg.2 FFPE [pat_078_N2384_15]": ["GSM2679264_pat_078_N2384_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_079 Surg.1 FFPE [pat_079_N2385_15]": ["GSM2679265_pat_079_N2385_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_079 Surg.2 FFPE [pat_079_N2386_15]": ["GSM2679266_pat_079_N2386_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_080 Surg.2 FFPE [pat_080_N2189_15]": ["GSM2679267_pat_080_N2189_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_080 Surg.1 FFPE [pat_080_N2403_15]": ["GSM2679268_pat_080_N2403_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_081 Surg.1 FFPE [pat_081_N677_15]": ["GSM2679269_pat_081_N677_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_081 Surg.2 FFPE [pat_081_N678_15]": ["GSM2679270_pat_081_N678_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_082 Surg.2 FFPE [pat_082_N2041_14_D]": ["GSM2679271_pat_082_N2041_14_D_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_082 Surg.1 FFPE [pat_082_N910_14_B]": ["GSM2679272_pat_082_N910_14_B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_083 Surg.2 FFPE [pat_083_N1496_13_C]": ["GSM2679273_pat_083_N1496_13_C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_083 Surg.1 FFPE [pat_083_N679_15]": ["GSM2679274_pat_083_N679_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_084 Surg.1 FFPE [pat_084_N2298_13_D]": ["GSM2679275_pat_084_N2298_13_D_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_084 Surg.2 FFPE [pat_084_N762_14_B]": ["GSM2679276_pat_084_N762_14_B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_085 Surg.2 FFPE [pat_085_N1096_14_B]": ["GSM2679277_pat_085_N1096_14_B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_085 Surg.1 FFPE [pat_085_N359_14_B]": ["GSM2679278_pat_085_N359_14_B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_086 Surg.2 FFPE [pat_086_N605_13]": ["GSM2679279_pat_086_N605_13_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_086 Surg.1 FFPE [pat_086_N681_15]": ["GSM2679280_pat_086_N681_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_087 Surg.2 FFPE [pat_087_N683_15]": ["GSM2679282_pat_087_N683_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_088 Surg.2 FFPE [pat_088_N2310_13_D]": ["GSM2679283_pat_088_N2310_13_D_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_088 Surg.1 FFPE [pat_088_N684_15]": ["GSM2679284_pat_088_N684_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_089 Surg.2 FFPE [pat_089_N1283_13_B]": ["GSM2679285_pat_089_N1283_13_B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_089 Surg.1 FFPE [pat_089_N686_15]": ["GSM2679286_pat_089_N686_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_090 Surg.2 FFPE [pat_090_N688_15]": ["GSM2679288_pat_090_N688_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_091 Surg.1 FFPE [pat_091_N689_15]": ["GSM2679289_pat_091_N689_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_091 Surg.2 FFPE [pat_091_N690_15]": ["GSM2679290_pat_091_N690_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_092 Surg.1 FFPE [pat_092_N693_15]": ["GSM2679291_pat_092_N693_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_092 Surg.2 FFPE [pat_092_N695_15]": ["GSM2679292_pat_092_N695_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_093 Surg.1 FFPE [pat_093_N698_15]": ["GSM2679293_pat_093_N698_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_093 Surg.2 FFPE [pat_093_N699_15]": ["GSM2679294_pat_093_N699_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_094 Surg.2 FFPE [pat_094_N701_15_B]": ["GSM2679296_pat_094_N701_15_B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_095 Surg.1 FFPE [pat_095_N702_15]": ["GSM2679297_pat_095_N702_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_096 Surg.1 FFPE [pat_096_N706_15]": ["GSM2679299_pat_096_N706_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_096 Surg.2 FFPE [pat_096_N707_15]": ["GSM2679300_pat_096_N707_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_097 Surg.1 FFPE [pat_097_N710_15]": ["GSM2679301_pat_097_N710_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_097 Surg.2 FFPE [pat_097_N711_15]": ["GSM2679302_pat_097_N711_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_098 Surg.1 FFPE [pat_098_N712_15]": ["GSM2679303_pat_098_N712_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_098 Surg.2 FFPE [pat_098_N713_15]": ["GSM2679304_pat_098_N713_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_099 Surg.2 FFPE [pat_099_N715_15]": ["GSM2679306_pat_099_N715_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_100 Surg.1 FFPE [pat_100_N719_15]": ["GSM2679307_pat_100_N719_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_100 Surg.2 FFPE [pat_100_N720_15_B]": ["GSM2679308_pat_100_N720_15_B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_101 Surg.1 FFPE [pat_101_N721_15]": ["GSM2679309_pat_101_N721_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_101 Surg.2 FFPE [pat_101_N722_15]": ["GSM2679310_pat_101_N722_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_102 Surg.1 FFPE [pat_102_N115_14]": ["GSM2679311_pat_102_N115_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_102 Surg.2 FFPE [pat_102_N733_15_C]": ["GSM2679312_pat_102_N733_15_C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_103 Surg.2 FFPE [pat_103_N1935_14]": ["GSM2679313_pat_103_N1935_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_103 Surg.1 FFPE [pat_103_N2083_13_A]": ["GSM2679314_pat_103_N2083_13_A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_103 Surg.3 FFPE [pat_103_N475_15]": ["GSM2679315_pat_103_N475_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_104 Surg.2 FFPE [pat_104_N2462_15]": ["GSM2679316_pat_104_N2462_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_104 Surg.1 FFPE [pat_104_N2506_14_B]": ["GSM2679317_pat_104_N2506_14_B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_106 Surg.2 FFPE [pat_106_N2264_13]": ["GSM2679318_pat_106_N2264_13_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_106 Surg.1 FFPE [pat_106_N995_11]": ["GSM2679319_pat_106_N995_11_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_107 Surg.3 FFPE [pat_107_N1330_09]": ["GSM2679320_pat_107_N1330_09_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_107 Surg.2 FFPE [pat_107_N234_09_C]": ["GSM2679321_pat_107_N234_09_C_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_107 Surg.1 FFPE [pat_107_N840_01]": ["GSM2679322_pat_107_N840_01_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_108 Surg.6 FFPE [pat_108_N1195_13_A]": ["GSM2679323_pat_108_N1195_13_A_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_108 Surg.2 FFPE [pat_108_N1764_06]": ["GSM2679324_pat_108_N1764_06_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_108 Surg.1 FFPE [pat_108_N194_05_A]": ["GSM2679325_pat_108_N194_05_A_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_108 Surg.3 FFPE [pat_108_N294_10_C]": ["GSM2679326_pat_108_N294_10_C_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_108 Surg.5 FFPE [pat_108_N54_13]": ["GSM2679327_pat_108_N54_13_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_108 Surg.4 FFPE [pat_108_N995_10]": ["GSM2679328_pat_108_N995_10_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_109 Surg.1 FFPE [pat_109_N1279_07]": ["GSM2679329_pat_109_N1279_07_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_109 Surg.2 FFPE [pat_109_N392_09]": ["GSM2679330_pat_109_N392_09_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_110 Surg.1 FFPE [pat_110_N1020_10]": ["GSM2679331_pat_110_N1020_10_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_110 Surg.1 RCL [pat_110_N1020_10_rk]": ["GSM2679333_pat_110_N1020_10_rk_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_110 Surg.2 FFPE [pat_110_N1916_12]": ["GSM2679334_pat_110_N1916_12_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_111 Surg.1 FFPE [pat_111_Graz_4_1_2010]": ["GSM2679336_pat_111_Graz_4_1_2010_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_111 Surg.2 FFPE [pat_111_Graz_4_5_2010]": ["GSM2679337_pat_111_Graz_4_5_2010_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_112 Surg.1 FFPE [pat_112_Graz_5_1_2009]": ["GSM2679338_pat_112_Graz_5_1_2009_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_112 Surg.2 FFPE [pat_112_Graz_5_4_2009]": ["GSM2679339_pat_112_Graz_5_4_2009_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_113 Surg.1 FFPE [pat_113_Graz_9_2_2011]": ["GSM2679340_pat_113_Graz_9_2_2011_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_113 Surg.2 FFPE [pat_113_Graz_9_4_2012]": ["GSM2679341_pat_113_Graz_9_4_2012_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_113 Surg.3 FFPE [pat_113_Graz_9_8_2014]": ["GSM2679342_pat_113_Graz_9_8_2014_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_114 Surg.1 FFPE [pat_114_Graz_10_1_2009]": ["GSM2679343_pat_114_Graz_10_1_2009_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_114 Surg.2 FFPE [pat_114_Graz_10_3_2009]": ["GSM2679344_pat_114_Graz_10_3_2009_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_116 Surg.1 FFPE [pat_116_Graz_12_2_2011]": ["GSM2679345_pat_116_Graz_12_2_2011_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_116 Surg.2 FFPE [pat_116_Graz_12_3_2011]": ["GSM2679346_pat_116_Graz_12_3_2011_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_117 Surg.2 FFPE [pat_117_N269_16]": ["GSM2679347_pat_117_N269_16_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_117 Surg.1 FFPE [pat_117_N759_15B]": ["GSM2679348_pat_117_N759_15B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_118 Surg.2 FFPE [pat_118_N2515_15C]": ["GSM2679349_pat_118_N2515_15C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_118 Surg.1 FFPE [pat_118_N2566_15_B]": ["GSM2679350_pat_118_N2566_15_B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_119 Surg.1 FFPE [pat_119_N200_15]": ["GSM2679351_pat_119_N200_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_119 Surg.2 FFPE [pat_119_N883_16A]": ["GSM2679352_pat_119_N883_16A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_120 Surg.1 FFPE [pat_120_N1512_14B]": ["GSM2679353_pat_120_N1512_14B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_120 Surg.2 FFPE [pat_120_N444_16B_1]": ["GSM2679354_pat_120_N444_16B_1_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_121 Surg.2 FFPE [pat_121_N1995_15]": ["GSM2679355_pat_121_N1995_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_121 Surg.1 FFPE [pat_121_N2613_14C]": ["GSM2679356_pat_121_N2613_14C_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_122 Surg.1 FFPE [pat_122_N1137_98]": ["GSM2679357_pat_122_N1137_98_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_122 Surg.2 FFPE [pat_122_N41_05A]": ["GSM2679358_pat_122_N41_05A_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_122 Surg.3 FFPE [pat_122_N697_11A]": ["GSM2679359_pat_122_N697_11A_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_123 Surg.4 FFPE [pat_123_N1453_06B]": ["GSM2679360_pat_123_N1453_06B_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_123 Surg.3 FFPE [pat_123_N289_04A]": ["GSM2679361_pat_123_N289_04A_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_124 Surg.2 FFPE [pat_124_N_541_09]": ["GSM2679362_pat_124_N_541_09_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_124 Surg.3 FFPE [pat_124_N_778_11]": ["GSM2679363_pat_124_N_778_11_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_125 Surg.1 FFPE [pat_125_N282_08]": ["GSM2679364_pat_125_N282_08_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_125 Surg.2 FFPE [pat_125_N_795_13]": ["GSM2679365_pat_125_N_795_13_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_126 Surg.1 FFPE [pat_126_N901_07_A]": ["GSM2679366_pat_126_N901_07_A_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_126 Surg.2 FFPE [pat_126_N_561_11]": ["GSM2679367_pat_126_N_561_11_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_127 Surg.1 FFPE [pat_127_N1101_03B]": ["GSM2679368_pat_127_N1101_03B_cpgmeth.bed.gz"], "RRBS Low-grade glioma patient pat_127 Surg.2 FFPE [pat_127_N781_12C]": ["GSM2679369_pat_127_N781_12C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_128 Surg.1 FFPE [pat_128_N661_08G3]": ["GSM3071727_pat_128_N661_08G3_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_129 Surg.1 FFPE [pat_129_N307_08C]": ["GSM3071728_pat_129_N307_08C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_130 Surg.1 FFPE [pat_130_N473_09]": ["GSM3071729_pat_130_N473_09_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_131 Surg.1 FFPE [pat_131_N104_11B]": ["GSM3071730_pat_131_N104_11B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_132 Surg.1 FFPE [pat_132_N1581_09B]": ["GSM3071731_pat_132_N1581_09B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_133 Surg.1 FFPE [pat_133_N268_09]": ["GSM3071732_pat_133_N268_09_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_134 Surg.1 FFPE [pat_134_N466_12A]": ["GSM3071733_pat_134_N466_12A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_135 Surg.1 FFPE [pat_135_N1583_07]": ["GSM3071735_pat_135_N1583_07_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_136 Surg.1 FFPE [pat_136_N1290_12C]": ["GSM3071736_pat_136_N1290_12C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_137 Surg.1 FFPE [pat_137_N1351_09B]": ["GSM3071738_pat_137_N1351_09B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_138 Surg.1 FFPE [pat_138_N637_10]": ["GSM3071739_pat_138_N637_10_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_139 Surg.1 FFPE [pat_139_N654_12B]": ["GSM3071740_pat_139_N654_12B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_140 Surg.1 FFPE [pat_140_N2207_13]": ["GSM3071742_pat_140_N2207_13_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_141 Surg.1 FFPE [pat_141_N1711_10B]": ["GSM3071744_pat_141_N1711_10B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_142 Surg.1 FFPE [pat_142_N1024_15B]": ["GSM3071745_pat_142_N1024_15B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_144 Surg.1 FFPE [pat_144_N1236_14A]": ["GSM3071748_pat_144_N1236_14A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_145 Surg.1 FFPE [pat_145_N1336_14A]": ["GSM3071749_pat_145_N1336_14A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_146 Surg.1 FFPE [pat_146_N1383_14A]": ["GSM3071750_pat_146_N1383_14A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_147 Surg.1 FFPE [pat_147_N1436_15]": ["GSM3071752_pat_147_N1436_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_148 Surg.1 FFPE [pat_148_N1448_14]": ["GSM3071754_pat_148_N1448_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_149 Surg.1 FFPE [pat_149_N1491_15]": ["GSM3071755_pat_149_N1491_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_150 Surg.1 FFPE [pat_150_N1541_14]": ["GSM3071756_pat_150_N1541_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_151 Surg.1 FFPE [pat_151_N1543_14E]": ["GSM3071758_pat_151_N1543_14E_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_152 Surg.1 FFPE [pat_152_N1576_15]": ["GSM3071760_pat_152_N1576_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_153 Surg.1 FFPE [pat_153_N1672_14]": ["GSM3071761_pat_153_N1672_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_154 Surg.1 FFPE [pat_154_N1875_14]": ["GSM3071763_pat_154_N1875_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_155 Surg.1 FFPE [pat_155_N1883_14]": ["GSM3071764_pat_155_N1883_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_156 Surg.1 FFPE [pat_156_N2012_14]": ["GSM3071766_pat_156_N2012_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_157 Surg.1 FFPE [pat_157_N2085_14B]": ["GSM3071767_pat_157_N2085_14B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_158 Surg.1 FFPE [pat_158_N2242_15]": ["GSM3071769_pat_158_N2242_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_159 Surg.1 FFPE [pat_159_N2395_15]": ["GSM3071770_pat_159_N2395_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_160 Surg.1 FFPE [pat_160_N2606_15]": ["GSM3071771_pat_160_N2606_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_161 Surg.1 FFPE [pat_161_N418_14]": ["GSM3071772_pat_161_N418_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_162 Surg.1 FFPE [pat_162_N487_16]": ["GSM3071773_pat_162_N487_16_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_163 Surg.1 FFPE [pat_163_N541_15]": ["GSM3071774_pat_163_N541_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_164 Surg.1 FFPE [pat_164_N581_14A]": ["GSM3071776_pat_164_N581_14A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_165 Surg.1 FFPE [pat_165_N592_15B]": ["GSM3071778_pat_165_N592_15B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_166 Surg.1 FFPE [pat_166_N697_14]": ["GSM3071780_pat_166_N697_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_167 Surg.1 FFPE [pat_167_N712_14]": ["GSM3071781_pat_167_N712_14_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_168 Surg.1 FFPE [pat_168_N900_15B]": ["GSM3071782_pat_168_N900_15B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_169 Surg.1 FFPE [pat_169_N579_12A]": ["GSM3071783_pat_169_N579_12A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_171 Surg.1 FFPE [pat_171_N834_13]": ["GSM3071785_pat_171_N834_13_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_172 Surg.1 FFPE [pat_172_N1043_09]": ["GSM3071787_pat_172_N1043_09_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_173 Surg.1 FFPE [pat_173_N337_13]": ["GSM3071788_pat_173_N337_13_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_174 Surg.1 FFPE [pat_174_N836_09G2]": ["GSM3071790_pat_174_N836_09G2_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_176 Surg.1 FFPE [pat_176_N1767_06B]": ["GSM3071792_pat_176_N1767_06B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_177 Surg.1 FFPE [pat_177_N815_08]": ["GSM3071793_pat_177_N815_08_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_178 Surg.1 FFPE [pat_178_N586_12]": ["GSM3071794_pat_178_N586_12_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_179 Surg.1 FFPE [pat_179_N2266_13]": ["GSM3071795_pat_179_N2266_13_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_180 Surg.1 FFPE [pat_180_N560_12C]": ["GSM3071796_pat_180_N560_12C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_181 Surg.1 FFPE [pat_181_N951_09B]": ["GSM3071798_pat_181_N951_09B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_182 Surg.1 FFPE [pat_182_N892_10]": ["GSM3071799_pat_182_N892_10_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_183 Surg.1 frozen [pat_183_N922_12_fv]": ["GSM3071801_pat_183_N922_12_fv_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_184 Surg.1 FFPE [pat_184_N1390_13C]": ["GSM3071802_pat_184_N1390_13C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_185 Surg.1 FFPE [pat_185_N540_09A]": ["GSM3071804_pat_185_N540_09A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_186 Surg.1 FFPE [pat_186_N177_13]": ["GSM3071805_pat_186_N177_13_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_187 Surg.1 FFPE [pat_187_N2611_14D]": ["GSM3071807_pat_187_N2611_14D_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_188 Surg.1 FFPE [pat_188_N2699_14B]": ["GSM3071809_pat_188_N2699_14B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_198 Surg.1 FFPE [pat_198_N313_10]": ["GSM3071810_pat_198_N313_10_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_199 Surg.1 FFPE [pat_199_N1722_10]": ["GSM3071811_pat_199_N1722_10_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_210 Surg.1 FFPE [pat_210_N296_09]": ["GSM3071812_pat_210_N296_09_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_211 Surg.1 FFPE [pat_211_N30_13]": ["GSM3071813_pat_211_N30_13_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_213 Surg.1 FFPE [pat_213_N1261_10B]": ["GSM3071814_pat_213_N1261_10B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_215 Surg.1 FFPE [pat_215_N1277_10]": ["GSM3071815_pat_215_N1277_10_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_216 Surg.1 FFPE [pat_216_N1516_10B]": ["GSM3071816_pat_216_N1516_10B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_217 Surg.1 FFPE [pat_217_N1563_09]": ["GSM3071817_pat_217_N1563_09_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_218 Surg.1 FFPE [pat_218_N711_09]": ["GSM3071818_pat_218_N711_09_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_219 Surg.1 FFPE [pat_219_N1509_08]": ["GSM3071819_pat_219_N1509_08_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_220 Surg.1 FFPE [pat_220_N567_09C]": ["GSM3071820_pat_220_N567_09C_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_221 Surg.1 FFPE [pat_221_N87_09B]": ["GSM3071821_pat_221_N87_09B_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_222 Surg.1 FFPE [pat_222_N324_08]": ["GSM3071822_pat_222_N324_08_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_223 Surg.1 FFPE [pat_223_N724_07]": ["GSM3071823_pat_223_N724_07_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_225 Surg.1 FFPE [pat_225_N144_06]": ["GSM3071825_pat_225_N144_06_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_227 Surg.1 FFPE [pat_227_N1381_07]": ["GSM3071827_pat_227_N1381_07_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_228 Surg.1 FFPE [pat_228_N526_06]": ["GSM3071828_pat_228_N526_06_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_229 Surg.1 FFPE [pat_229_N1248_06]": ["GSM3071829_pat_229_N1248_06_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_230 Surg.1 FFPE [pat_230_N1254_06A]": ["GSM3071830_pat_230_N1254_06A_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_231 Surg.1 FFPE [pat_231_N1582_06Z]": ["GSM3071831_pat_231_N1582_06Z_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_232 Surg.1 FFPE [pat_232_N1225_11]": ["GSM3071832_pat_232_N1225_11_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_233 Surg.1 FFPE [pat_233_N435_06]": ["GSM3071833_pat_233_N435_06_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_234 Surg.1 FFPE [pat_234_N960_06]": ["GSM3071834_pat_234_N960_06_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_236 Surg.1 FFPE [pat_236_N7_11]": ["GSM3071835_pat_236_N7_11_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_238 Surg.1 FFPE [pat_238_N500_10]": ["GSM3071837_pat_238_N500_10_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_258 Surg.1 FFPE [pat_258_Graz_46_2]": ["GSM3071838_pat_258_Graz_46_2_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_259 Surg.1 FFPE [pat_259_Graz_47]": ["GSM3071839_pat_259_Graz_47_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_260 Surg.1 FFPE [pat_260_Graz_49_2]": ["GSM3071840_pat_260_Graz_49_2_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_261 Surg.1 FFPE [pat_261_Graz_50_1]": ["GSM3071841_pat_261_Graz_50_1_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_262 Surg.1 FFPE [pat_262_Graz_51_1]": ["GSM3071842_pat_262_Graz_51_1_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_263 Surg.1 FFPE [pat_263_Graz_52]": ["GSM3071843_pat_263_Graz_52_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_264 Surg.1 FFPE [pat_264_Graz_53]": ["GSM3071844_pat_264_Graz_53_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_265 Surg.1 FFPE [pat_265_Graz_54]": ["GSM3071845_pat_265_Graz_54_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_266 Surg.1 FFPE [pat_266_Graz_55_1]": ["GSM3071846_pat_266_Graz_55_1_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_267 Surg.1 FFPE [pat_267_Graz_56_2]": ["GSM3071847_pat_267_Graz_56_2_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_268 Surg.1 FFPE [pat_268_Graz_57]": ["GSM3071848_pat_268_Graz_57_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_330 Surg.1 FFPE [pat_330_N1298_16]": ["GSM3071849_pat_330_N1298_16_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_331 Surg.1 FFPE [pat_331_N1835_16]": ["GSM3071851_pat_331_N1835_16_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_332 Surg.1 FFPE [pat_332_N255_16]": ["GSM3071853_pat_332_N255_16_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_333 Surg.1 FFPE [pat_333_N2712_15]": ["GSM3071855_pat_333_N2712_15_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_334 Surg.1 FFPE [pat_334_N570_16]": ["GSM3071857_pat_334_N570_16_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_336 Surg.1 FFPE [pat_336_N727_16]": ["GSM3071860_pat_336_N727_16_cpgmeth.bed.gz"], "RRBS Glioblastoma patient pat_337 Surg.1 FFPE [pat_337_N940_16]": ["GSM3071861_pat_337_N940_16_cpgmeth.bed.gz"], "HIM18 Human_glomeruli_DNase-seq_DS35973": ["GSM3196013_DS35973-LN30328-AG6995-peaks.bed.gz"], "HIM22 Human_glomeruli_DNase-seq_DS39386": ["GSM3196014_DS39386-LN32272-AG3852-peaks.bed.gz"], "HIM23 Human_glomeruli_DNase-seq_DS40507": ["GSM3196015_DS40507-LN33574-AG7000-peaks.bed.gz"], "HIM26 Human_glomeruli_DNase-seq_DS41157": ["GSM3196016_DS41157-LN33957-AG7003-peaks.bed.gz"], "HIM13 Human_kidney_tubule_DNase-seq_DS27824": ["GSM3196017_DS27824-LN29654-AG3899-peaks.bed.gz"], "HIM15 Human_kidney_tubule_DNase-seq_DS37969": ["GSM3196018_DS37969-LN31356-AG6997-peaks.bed.gz"], "HIM23 Human_kidney_tubule_DNase-seq_DS41396": ["GSM3196019_DS41396-LN34037-AG7005-peaks.bed.gz"], "Podocytes-33C Human_kidney_podocytes_DNase-seq_DS26685": ["GSM3196020_DS26685-LN26974-AG6994-peaks.bed.gz"], "Podocytes-37C Human_kidney_podocytes_DNase-seq_DS26687": ["GSM3196021_DS26687-LN34624-AG6216-peaks.bed.gz"], "ChIP-seq_control_Kac": ["GSM2899155_Kac_broad_peaks.broadPeak.gz"], "ChIP-seq_SB-treated_Kac": ["GSM2899158_Kac_treat_broad_peaks.broadPeak.gz"], "ChIP-seq_SB-treated_Kbz": ["GSM2899159_Kbz_treat_broad_peaks.broadPeak.gz"], "PARP1_PAR-CLiP": ["GSM2508007_COMBINED_PARalyzer.bed.gz"], "MCF10A_H3K4me3_ChIP": ["GSM2949414_10A_H3K4me3.broadPeak.gz"], "MCF10A_H3K27me3_ChIP": ["GSM2949415_10A_H3K27me3.narrowPeak.gz"], "MCF10A_H3K79me2_ChIP": ["GSM2949416_10A_H3K79me2.broadPeak.gz"], "1642 tumor adjacent-ip": ["GSM2464901_1642no.bed.gz"], "1642 tumor-ip": ["GSM2464903_1642tu.bed.gz"], "1806-tumor adjacent-IP": ["GSM2464905_1806N.bed.gz"], "1806-tumor-IP": ["GSM2464907_1806T.bed.gz"], "1820-tumor adjacent-IP": ["GSM2464909_1820N.bed.gz"], "1820-tumor-IP": ["GSM2464911_1820T.bed.gz"], "1834-tumor adjacent-IP": ["GSM2464913_1834N.bed.gz"], "1834-tumor-IP": ["GSM2464915_1834T.bed.gz"], "35-tumor-IP": ["GSM2464917_35.bed.gz"], "36-tumor adjacent-IP": ["GSM2464919_36.bed.gz"], "41-tumor-IP": ["GSM2464921_41.bed.gz"], "42-tumor adjacent-IP": ["GSM2464923_42.bed.gz"], "HEC-1-A muMETTL14-IP": ["GSM2464925_HEC.mu14.bed.gz"], "HEC-1-A shControl-IP": ["GSM2464927_HEC.shC.bed.gz"], "HEC-1-A shMETTL3-IP": ["GSM2464929_HEC.shM3.bed.gz"], "HEC-1-A wtMETTL14-IP": ["GSM2464931_HEC.wt14.bed.gz"], "Bulk Hi-C Library RUES2 ESC Rep 1": ["GSM2845448_ESC_Rep1_DI_TADs.bed.gz", "GSM2845448_ESC_Rep1_500KB_bins.bed.gz"], "Bulk Hi-C Library RUES2 ESC Rep 2": ["GSM2845449_ESC_Rep2_500KB_bins.bed.gz", "GSM2845449_ESC_Rep2_DI_TADs.bed.gz"], "Bulk Hi-C Library RUES2 MES Rep 1": ["GSM2845450_MES_Rep1_DI_TADs.bed.gz", "GSM2845450_MES_Rep1_500KB_bins.bed.gz"], "Bulk Hi-C Library RUES2 MES Rep 2": ["GSM2845451_MES_Rep2_500KB_bins.bed.gz", "GSM2845451_MES_Rep2_DI_TADs.bed.gz"], "Bulk Hi-C Library RUES2 CP Rep 1": ["GSM2845452_CP_Rep1_DI_TADs.bed.gz", "GSM2845452_CP_Rep1_500KB_bins.bed.gz"], "Bulk Hi-C Library RUES2 CP Rep 2": ["GSM2845453_CP_Rep2_500KB_bins.bed.gz", "GSM2845453_CP_Rep2_DI_TADs.bed.gz"], "Bulk Hi-C Library RUES2 CM Rep 1": ["GSM2845454_CM_Rep1_DI_TADs.bed.gz", "GSM2845454_CM_Rep1_500KB_bins.bed.gz"], "Bulk Hi-C Library RUES2 CM Rep 2": ["GSM2845455_CM_Rep2_DI_TADs.bed.gz", "GSM2845455_CM_Rep2_500KB_bins.bed.gz"], "Bulk Hi-C Library RUES2 Fetal Heart Rep 1": ["GSM2845456_Fetal_Heart_Rep1_500KB.bins.bed.gz"], "Bulk Hi-C Library RUES2 Fetal Heart Rep 2": ["GSM2845457_Fetal_Heart_Rep2_500KB.bins.bed.gz"], "ATAC Library ESC Rep 1": ["GSM2845468_ESC_Rep1_MACS_peaks.narrowPeak.gz"], "ATAC Library ESC Rep 2": ["GSM2845469_ESC_Rep2_MACS_peaks.narrowPeak.gz"], "ATAC Library MES Rep 1": ["GSM2845470_MES_Rep1_MACS_peaks.narrowPeak.gz"], "ATAC Library MES Rep 2": ["GSM2845471_MES_Rep2_MACS_peaks.narrowPeak.gz"], "ATAC Library CP Rep 1": ["GSM2845472_CP_Rep1_MACS_peaks.narrowPeak.gz"], "ATAC Library CP Rep 2": ["GSM2845473_CP_Rep2_MACS_peaks.narrowPeak.gz"], "ATAC Library CM Rep 1": ["GSM2845474_CM_Rep1_MACS_peaks.narrowPeak.gz"], "ATAC Library CM Rep 2": ["GSM2845475_CM_Rep2_MACS_peaks.narrowPeak.gz"], "Scramble": ["GSM2356703_annotated_peaks_shScramble.bed.gz"], "TRF2 under-expressed": ["GSM2356704_annotated_peaks_shTRF2.bed.gz"], "TRF2 over-expressed": ["GSM2356705_annotated_peaks_TRF2.bed.gz"], "Empty": ["GSM2356706_annotated_peaks_Empty.bed.gz"], "T-ALL1 DMSO treated H3K27Ac ChIP-seq": ["GSM2793825_TALL1.DK27Ac_summits.bed.gz"], "T-ALL1 GSI treated H3K27Ac ChIP-seq": ["GSM2793826_TALL1.GK27Ac_summits.bed.gz"], "T-ALL1 DMSO treated Notch3 ChIP-seq": ["GSM2793827_TALL1.N3.DMSO_summits.bed.gz"], "T-ALL1 GSI treated Notch3 ChIP-seq": ["GSM2793828_TALL1.N3.GSI_summits.bed.gz"], "WT PFV (codon-optimized, 4-component) vector in HT1080 cells": ["GSM2584469_PFV_4comp_WT_HT1080_Feb2016_hg38_2bp.bed.gz"], "R540Q PFV (codon-optimized, 4-component) vector in HT1080 cells": ["GSM2584470_PFV_4comp_RQ_HT1080_Feb2016_hg38_2bp.bed.gz"], "WT PFV (codon-optimized, 4-component) vector in MRC5 cells": ["GSM2584471_PFV_4comp_WT_MRC5_July2016_PL7_2bp_hg38.bed.gz"], "R540Q PFV (codon-optimized, 4-component) vector in MRC5 cells": ["GSM2584472_PFV_4comp_RQ_MRC5_July2016_PL8_2bp_hg38.bed.gz"], "WT PFV (codon-optimized, 4-component) vector in HEK293T cells": ["GSM2584473_PFV_4comp_WT_293T_July2016_PL5_2bp_hg38.bed.gz"], "R540Q PFV (codon-optimized, 4-component) vector in HEK293T cells": ["GSM2584474_PFV_4comp_RQ_293T_July2016_PL6_2bp_hg38.bed.gz"], "WT PFV (codon-optimized, 4-component) vector in HepG2 cells": ["GSM2584475_PFV_4comp_WT_HepG2_July2016_PL9_2bp_hg38.bed.gz"], "R540Q PFV (codon-optimized, 4-component) vector in HepG2 cells": ["GSM2584476_PFV_4comp_RQ_HepG2_July2016_PL10_2bp_hg38.bed.gz"], "WT PFV vector in HT1080 cells": ["GSM2584477_PFV_2comp_WT_HT1080_PL1_PL3_PL4_PL14_P1_P7_SeptOct2015_hg38_2bp.bed.gz"], "R540Q PFV vector in HT1080 cells": ["GSM2584478_PFV_2comp_RQ_HT1080_PL15_P2_P11_SeptOct2015_hg38_2bp.bed.gz"], "WT PFV vector in MRC5 cells": ["GSM2584479_PFV_2comp_WT_MRC5_July2016_PL1_PL13_combined_2bp_hg38.bed.gz"], "R540Q PFV vector in MRC5 cells": ["GSM2584480_PFV_2comp_RQ_MRC5_July2016_PL2_PL14_combined_2bp_hg38.bed.gz"], "WT SFVmac vector in HT1080 cells": ["GSM2584481_SimianFV_2comp_WT_combined_Sept2015_hg38_2bp.bed.gz"], "R541Q SFVmac vector in HT1080 cells": ["GSM2584482_SimianFV_2comp_RQ_combined_Feb2016_hg38_2bp.bed.gz"], "HL60 Rep 1 ATAC-seq": ["GSM2083754_HL60-Rep1.peaks.bed.gz"], "HL60 Rep 2 ATAC-seq": ["GSM2083755_HL60-Rep2.peaks.bed.gz"], "HL60 Rep 3 ATAC-seq": ["GSM2083756_HL60-Rep3.peaks.bed.gz"], "3h Macrophage Rep 1 ATAC-seq": ["GSM2083757_3h-Mac-Rep1.peaks.bed.gz"], "3h Macrophage Rep 2 ATAC-seq": ["GSM2083758_3h-Mac-Rep2.peaks.bed.gz"], "3h Macrophage Rep 3 ATAC-seq": ["GSM2083759_3h-Mac-Rep3.peaks.bed.gz"], "6h Macrophage Rep 1 ATAC-seq": ["GSM2083760_6h-Mac-Rep1.peaks.bed.gz"], "6h Macrophage Rep 2 ATAC-seq": ["GSM2083761_6h-Mac-Rep2.peaks.bed.gz"], "6h Macrophage Rep 3 ATAC-seq": ["GSM2083762_6h-Mac-Rep3.peaks.bed.gz"], "12h Macrophage Rep 1 ATAC-seq": ["GSM2083763_12h-Mac-Rep1.peaks.bed.gz"], "12h Macrophage Rep 2 ATAC-seq": ["GSM2083764_12h-Mac-Rep2.peaks.bed.gz"], "12h Macrophage Rep 3 ATAC-seq": ["GSM2083765_12h-Mac-Rep3.peaks.bed.gz"], "24h Macrophage Rep 1 ATAC-seq": ["GSM2083766_24h-Mac-Rep1.peaks.bed.gz"], "24h Macrophage Rep 2 ATAC-seq": ["GSM2083767_24h-Mac-Rep2.peaks.bed.gz"], "24h Macrophage Rep 3 ATAC-seq": ["GSM2083768_24h-Mac-Rep3.peaks.bed.gz"], "48h Macrophage Rep 1 ATAC-seq": ["GSM2083769_48h-Mac-Rep1.peaks.bed.gz"], "48h Macrophage Rep 2 ATAC-seq": ["GSM2083770_48h-Mac-Rep2.peaks.bed.gz"], "48h Macrophage Rep 3 ATAC-seq": ["GSM2083771_48h-Mac-Rep3.peaks.bed.gz"], "48h Macrophage LPS Rep 1 ATAC-seq": ["GSM2083772_48h-MacLPS-Rep1.peaks.bed.gz"], "48h Macrophage LPS Rep 2 ATAC-seq": ["GSM2083773_48h-MacLPS-Rep2.peaks.bed.gz"], "48h Macrophage LPS Rep 3 ATAC-seq": ["GSM2083774_48h-MacLPS-Rep3.peaks.bed.gz"], "96h Macrophage Rep 1 ATAC-seq": ["GSM2083775_96h-Mac-Rep1.peaks.bed.gz"], "96h Macrophage Rep 2 ATAC-seq": ["GSM2083776_96h-Mac-Rep2.peaks.bed.gz"], "96h Macrophage Rep 3 ATAC-seq": ["GSM2083777_96h-Mac-Rep3.peaks.bed.gz"], "120h Macrophage Rep 1 ATAC-seq": ["GSM2083778_120h-Mac-Rep1.peaks.bed.gz"], "120h Macrophage Rep 2 ATAC-seq": ["GSM2083779_120h-Mac-Rep2.peaks.bed.gz"], "120h Macrophage Rep 3 ATAC-seq": ["GSM2083780_120h-Mac-Rep3.peaks.bed.gz"], "120h Macrophage LPS Rep 1 ATAC-seq": ["GSM2083781_120h-MacLPS-Rep1.peaks.bed.gz"], "120h Macrophage LPS Rep 2 ATAC-seq": ["GSM2083782_120h-MacLPS-Rep2.peaks.bed.gz"], "120h Macrophage LPS Rep 3 ATAC-seq": ["GSM2083783_120h-MacLPS-Rep3.peaks.bed.gz"], "3h Neutrophil Rep 1 ATAC-seq": ["GSM2083784_3h-Neu-Rep1.peaks.bed.gz"], "3h Neutrophil Rep 2 ATAC-seq": ["GSM2083785_3h-Neu-Rep2.peaks.bed.gz"], "3h Neutrophil Rep 3 ATAC-seq": ["GSM2083786_3h-Neu-Rep3.peaks.bed.gz"], "6h Neutrophil Rep 1 ATAC-seq": ["GSM2083787_6h-Neu-Rep1.peaks.bed.gz"], "6h Neutrophil Rep 2 ATAC-seq": ["GSM2083788_6h-Neu-Rep2.peaks.bed.gz"], "6h Neutrophil Rep 3 ATAC-seq": ["GSM2083789_6h-Neu-Rep3.peaks.bed.gz"], "12h Neutrophil Rep 1 ATAC-seq": ["GSM2083790_12h-Neu-Rep1.peaks.bed.gz"], "12h Neutrophil Rep 2 ATAC-seq": ["GSM2083791_12h-Neu-Rep2.peaks.bed.gz"], "12h Neutrophil Rep 3 ATAC-seq": ["GSM2083792_12h-Neu-Rep3.peaks.bed.gz"], "24h Neutrophil Rep 1 ATAC-seq": ["GSM2083793_24h-Neu-Rep1.peaks.bed.gz"], "24h Neutrophil Rep 2 ATAC-seq": ["GSM2083794_24h-Neu-Rep2.peaks.bed.gz"], "24h Neutrophil Rep 3 ATAC-seq": ["GSM2083795_24h-Neu-Rep3.peaks.bed.gz"], "48h Neutrophil Rep 1 ATAC-seq": ["GSM2083796_48h-Neu-Rep1.peaks.bed.gz"], "48h Neutrophil Rep 2 ATAC-seq": ["GSM2083797_48h-Neu-Rep2.peaks.bed.gz"], "48h Neutrophil Rep 3 ATAC-seq": ["GSM2083798_48h-Neu-Rep3.peaks.bed.gz"], "96h Neutrophil Rep 1 ATAC-seq": ["GSM2083799_96h-Neu-Rep1.peaks.bed.gz"], "96h Neutrophil Rep 2 ATAC-seq": ["GSM2083800_96h-Neu-Rep2.peaks.bed.gz"], "96h Neutrophil Rep 3 ATAC-seq": ["GSM2083801_96h-Neu-Rep3.peaks.bed.gz"], "120h Neutrophil Rep 1 ATAC-seq": ["GSM2083802_120h-Neu-Rep1.peaks.bed.gz"], "120h Neutrophil Rep 2 ATAC-seq": ["GSM2083803_120h-Neu-Rep2.peaks.bed.gz"], "120h Neutrophil Rep 3 ATAC-seq": ["GSM2083804_120h-Neu-Rep3.peaks.bed.gz"], "120h Neutrophil LPS Rep 1 ATAC-seq": ["GSM2083805_120h-NeuLPS-Rep1.peaks.bed.gz"], "120h Neutrophil LPS Rep 2 ATAC-seq": ["GSM2083806_120h-NeuLPS-Rep2.peaks.bed.gz"], "120h Neutrophil LPS Rep 3 ATAC-seq": ["GSM2083807_120h-NeuLPS-Rep3.peaks.bed.gz"], "3h Monocyte Rep 1 ATAC-seq": ["GSM2083808_3h-Mon-Rep1.peaks.bed.gz"], "3h Monocyte Rep 2 ATAC-seq": ["GSM2083809_3h-Mon-Rep2.peaks.bed.gz"], "3h Monocyte Rep 3 ATAC-seq": ["GSM2083810_3h-Mon-Rep3.peaks.bed.gz"], "6h Monocyte Rep 1 ATAC-seq": ["GSM2083811_6h-Mon-Rep1.peaks.bed.gz"], "6h Monocyte Rep 2 ATAC-seq": ["GSM2083812_6h-Mon-Rep2.peaks.bed.gz"], "6h Monocyte Rep 3 ATAC-seq": ["GSM2083813_6h-Mon-Rep3.peaks.bed.gz"], "12h Monocyte Rep 1 ATAC-seq": ["GSM2083814_12h-Mon-Rep1.peaks.bed.gz"], "12h Monocyte Rep 2 ATAC-seq": ["GSM2083815_12h-Mon-Rep2.peaks.bed.gz"], "12h Monocyte Rep 3 ATAC-seq": ["GSM2083816_12h-Mon-Rep3.peaks.bed.gz"], "24h Monocyte Rep 1 ATAC-seq": ["GSM2083817_24h-Mon-Rep1.peaks.bed.gz"], "24h Monocyte Rep 2 ATAC-seq": ["GSM2083818_24h-Mon-Rep2.peaks.bed.gz"], "24h Monocyte Rep 3 ATAC-seq": ["GSM2083819_24h-Mon-Rep3.peaks.bed.gz"], "48h Monocyte Rep 1 ATAC-seq": ["GSM2083820_48h-Mon-Rep1.peaks.bed.gz"], "48h Monocyte Rep 2 ATAC-seq": ["GSM2083821_48h-Mon-Rep2.peaks.bed.gz"], "48h Monocyte Rep 3 ATAC-seq": ["GSM2083822_48h-Mon-Rep3.peaks.bed.gz"], "96h Monocyte Rep 1 ATAC-seq": ["GSM2083823_96h-Mon-Rep1.peaks.bed.gz"], "96h Monocyte Rep 2 ATAC-seq": ["GSM2083824_96h-Mon-Rep2.peaks.bed.gz"], "96h Monocyte Rep 3 ATAC-seq": ["GSM2083825_96h-Mon-Rep3.peaks.bed.gz"], "120h Monocyte Rep 1 ATAC-seq": ["GSM2083826_120h-Mon-Rep1.peaks.bed.gz"], "120h Monocyte Rep 2 ATAC-seq": ["GSM2083827_120h-Mon-Rep2.peaks.bed.gz"], "120h Monocyte Rep 3 ATAC-seq": ["GSM2083828_120h-Mon-Rep3.peaks.bed.gz"], "120h Monocyte LPS Rep 1 ATAC-seq": ["GSM2083829_120h-MonLPS-Rep1.peaks.bed.gz"], "120h Monocyte LPS Rep 2 ATAC-seq": ["GSM2083830_120h-MonLPS-Rep2.peaks.bed.gz"], "120h Monocyte LPS Rep 3 ATAC-seq": ["GSM2083831_120h-MonLPS-Rep3.peaks.bed.gz"], "123h Monocyte-derived Mac PMA Rep 1 ATAC-seq": ["GSM2083832_123h-MonPMA-Rep1.peaks.bed.gz"], "123h Monocyte-derived Mac PMA Rep 2 ATAC-seq": ["GSM2083833_123h-MonPMA-Rep2.peaks.bed.gz"], "123h Monocyte-derived Mac PMA Rep 3 ATAC-seq": ["GSM2083834_123h-MonPMA-Rep3.peaks.bed.gz"], "126h Monocyte-derived Mac PMA Rep 1 ATAC-seq": ["GSM2083835_126h-MonPMA-Rep1.peaks.bed.gz"], "126h Monocyte-derived Mac PMA Rep 2 ATAC-seq": ["GSM2083836_126h-MonPMA-Rep2.peaks.bed.gz"], "126h Monocyte-derived Mac PMA Rep 3 ATAC-seq": ["GSM2083837_126h-MonPMA-Rep3.peaks.bed.gz"], "132h Monocyte-derived Mac PMA Rep 1 ATAC-seq": ["GSM2083838_132h-MonPMA-Rep1.peaks.bed.gz"], "132h Monocyte-derived Mac PMA Rep 2 ATAC-seq": ["GSM2083839_132h-MonPMA-Rep2.peaks.bed.gz"], "132h Monocyte-derived Mac PMA Rep 3 ATAC-seq": ["GSM2083840_132h-MonPMA-Rep3.peaks.bed.gz"], "144h Monocyte-derived Mac PMA Rep 1 ATAC-seq": ["GSM2083841_144h-MonPMA-Rep1.peaks.bed.gz"], "144h Monocyte-derived Mac PMA Rep 2 ATAC-seq": ["GSM2083842_144h-MonPMA-Rep2.peaks.bed.gz"], "144h Monocyte-derived Mac PMA Rep 3 ATAC-seq": ["GSM2083843_144h-MonPMA-Rep3.peaks.bed.gz"], "168h Monocyte-derived Mac PMA Rep 1 ATAC-seq": ["GSM2083844_168h-MonPMA-Rep1.peaks.bed.gz"], "168h Monocyte-derived Mac PMA Rep 2 ATAC-seq": ["GSM2083845_168h-MonPMA-Rep2.peaks.bed.gz"], "168h Monocyte-derived Mac PMA Rep 3 ATAC-seq": ["GSM2083846_168h-MonPMA-Rep3.peaks.bed.gz"], "168h Monocyte-derived Mac PMA-LPS Rep 1 ATAC-seq": ["GSM2083847_168h-MonPMA-LPS-Rep1.peaks.bed.gz"], "168h Monocyte-derived Mac PMA-LPS Rep 2 ATAC-seq": ["GSM2083848_168h-MonPMA-LPS-Rep2.peaks.bed.gz"], "168h Monocyte-derived Mac PMA-LPS Rep 3 ATAC-seq": ["GSM2083849_168h-MonPMA-LPS-Rep3.peaks.bed.gz"], "DIPG007 DMSO me3": ["GSM2266129_DIPG_DIPG007_K27M_DMSO_H3K27me3.bed.gz"], "DIPG012 DMSO me3": ["GSM2266131_DIPG_DIPG012_K27M_DMSO_H3K27me3.bed.gz"], "SF7761 DMSO me3": ["GSM2266133_DIPG_SF7761_K27M_DMSO_H3K27me3.bed.gz"], "SF8628 DMSO me3": ["GSM2266135_DIPG_SF8628_K27M_DMSO_H3K27me3.bed.gz"], "HTGTS_MEC1.DMSO rep1": ["GSM2059321_HTGTS_MEC1.DMSO.C1_1.bed.gz"], "HTGTS_MEC1.DMSO rep2": ["GSM2059322_HTGTS_MEC1.DMSO.C2_2.bed.gz"], "HTGTS_MEC1.Idelalisib rep1": ["GSM2059323_HTGTS_MEC1.Idelalisib.C1_1.bed.gz"], "HTGTS_MEC1.Idelalisib rep2": ["GSM2059324_HTGTS_MEC1.Idelalisib.C1_2.bed.gz"], "HTGTS_MEC1.Idelalisib rep3": ["GSM2059325_HTGTS_MEC1.Idelalisib.C2_3.bed.gz"], "HTGTS_MEC1.Idelalisib rep4": ["GSM2059326_HTGTS_MEC1.Idelalisib.C2_4.bed.gz"], "HTGTS_MEC1.Duvelisib rep1": ["GSM2059327_HTGTS_MEC1.Duvelisib.C1_1.bed.gz"], "HTGTS_MEC1.Duvelisib rep2": ["GSM2059328_HTGTS_MEC1.Duvelisib.C1_2.bed.gz"], "HTGTS_MEC1.Duvelisib rep3": ["GSM2059329_HTGTS_MEC1.Duvelisib.C2_3.bed.gz"], "HTGTS_MEC1.Duvelisib rep4": ["GSM2059330_HTGTS_MEC1.Duvelisib.C2_4.bed.gz"], "HTGTS_MEC1.Ibrutinib rep1": ["GSM2059331_HTGTS_MEC1.Ibrutinib.C1_1.bed.gz"], "HTGTS_MEC1.Ibrutinib rep2": ["GSM2059332_HTGTS_MEC1.Ibrutinib.C1_2.bed.gz"], "HTGTS_MEC1.Ibrutinib rep3": ["GSM2059333_HTGTS_MEC1.Ibrutinib.C3_3.bed.gz"], "HTGTS_MEC1.Ibrutinib rep4": ["GSM2059334_HTGTS_MEC1.Ibrutinib.C2_4.bed.gz"], "HTGTS_JeKo-1.DMSO rep1": ["GSM2059335_HTGTS_JeKo-1.DMSO.C1_1.bed.gz"], "HTGTS_JeKo-1.DMSO rep2": ["GSM2059336_HTGTS_JeKo-1.DMSO.C1-2_1.bed.gz"], "HTGTS_JeKo-1.DMSO rep3": ["GSM2059337_HTGTS_JeKo-1.DMSO.C2_3.bed.gz"], "HTGTS_JeKo-1.DMSO rep4": ["GSM2059338_HTGTS_JeKo-1.DMSO.C2_4.bed.gz"], "HTGTS_JeKo-1.Idelalisib rep1": ["GSM2059339_HTGTS_JeKo-1.Idelalisib.C1_1.bed.gz"], "HTGTS_JeKo-1.Idelalisib rep2": ["GSM2059340_HTGTS_JeKo-1.Idelalisib.C1_2.bed.gz"], "HTGTS_JeKo-1.Idelalisib rep3": ["GSM2059341_HTGTS_JeKo-1.Idelalisib.C2_3.bed.gz"], "HTGTS_JeKo-1.Idelalisib rep4": ["GSM2059342_HTGTS_JeKo-1.Idelalisib.C2_4.bed.gz"], "HTGTS_JeKo-1.Idelalisib rep5": ["GSM2059343_HTGTS_JeKo-1.Idelalisib.C2_5.bed.gz"], "HTGTS_JeKo-1.Idelalisib rep6": ["GSM2059344_HTGTS_JeKo-1.Idelalisib.C2_6.bed.gz"], "HTGTS_JeKo-1.Duvelisib rep1": ["GSM2059345_HTGTS_JeKo-1.Duvelisib.C1_1.bed.gz"], "HTGTS_JeKo-1.Duvelisib rep2": ["GSM2059346_HTGTS_JeKo-1.Duvelisib.C1_2.bed.gz"], "HTGTS_JeKo-1.Duvelisib rep3": ["GSM2059347_HTGTS_JeKo-1.Duvelisib.C2_3.bed.gz"], "HTGTS_JeKo-1.Duvelisib rep4": ["GSM2059348_HTGTS_JeKo-1.Duvelisib.C2_4.bed.gz"], "HTGTS_JeKo-1.Duvelisib rep5": ["GSM2059349_HTGTS_JeKo-1.Duvelisib.C2_5.bed.gz"], "HTGTS_JeKo-1.Ibrutinib rep1": ["GSM2059350_HTGTS_JeKo-1.Ibrutinib.C1_1.bed.gz"], "HTGTS_JeKo-1.Ibrutinib rep2": ["GSM2059351_HTGTS_JeKo-1.Ibrutinib.C1_2.bed.gz"], "HTGTS_JeKo-1.Ibrutinib rep3": ["GSM2059352_HTGTS_JeKo-1.Ibrutinib.C2_3.bed.gz"], "HTGTS_MEC1.Duvelisib rep5": ["GSM2430305_HTGTS_MEC1.Duvelisib.C1_5.bed.gz"], "HTGTS_MEC1.Duvelisib rep6": ["GSM2430306_HTGTS_MEC1.Duvelisib.C2_6.bed.gz"], "HTGTS_MEC1.KO-DMSO rep1": ["GSM2430307_HTGTS_MEC1.KO-DMSO.C1_1.bed.gz"], "HTGTS_MEC1.KO-DMSO rep2": ["GSM2430308_HTGTS_MEC1.KO-DMSO.C1_2.bed.gz"], "HTGTS_MEC1.KO-DMSO rep3": ["GSM2430309_HTGTS_MEC1.KO-DMSO.C2_3.bed.gz"], "HTGTS_MEC1.KO-Idelalisib rep1": ["GSM2430310_HTGTS_MEC1.KO-Idelalisib.C1_1.bed.gz"], "HTGTS_MEC1.KO-Idelalisib rep2": ["GSM2430311_HTGTS_MEC1.KO-Idelalisib.C1_2.bed.gz"], "HTGTS_MEC1.KO-Idelalisib rep3": ["GSM2430312_HTGTS_MEC1.KO-Idelalisib.C2_3.bed.gz"], "HTGTS_MEC1.KO-Duvelisib rep1": ["GSM2430313_HTGTS_MEC1.KO-Duvelisib.C1_1.bed.gz"], "HTGTS_MEC1.KO-Duvelisib rep2": ["GSM2430314_HTGTS_MEC1.KO-Duvelisib.C1_2.bed.gz"], "HTGTS_MEC1.KO-Duvelisib rep3": ["GSM2430315_HTGTS_MEC1.KO-Duvelisib.C2_3.bed.gz"], "ChIP-TRIM28": ["GSM2230418_NS_Trim28.peaks.bed.gz"], "ChIP-H3K9me3": ["GSM2230419_NS_h3k9me3.broad.bed.gz"], "H7_hESC_ATAC-seq": ["GSM2257291_ATAC1+2_IDR.narrowPeak.gz"], "H7_derived_APS_ATAC-seq": ["GSM2257292_ATAC3+4_IDR.narrowPeak.gz"], "H7_derived_MPS_ATAC-seq": ["GSM2257293_ATAC5+6_IDR.narrowPeak.gz"], "H7_derived_DLL1pPXM_ATAC-seq": ["GSM2257294_ATAC7+8_IDR.narrowPeak.gz"], "H7_derived_ESMT_ATAC-seq": ["GSM2257295_ATAC13+14_IDR.narrowPeak.gz"], "H7_derived_Sclrtm_ATAC-seq": ["GSM2257296_ATAC11+12_IDR.narrowPeak.gz"], "H7_D5CntrlDrmmtm_ATAC-seq": ["GSM2257297_ATAC19+20_IDR.narrowPeak.gz"], "H7_D2LtM_ATAC-seq": ["GSM2257298_ATAC9+10_IDR.narrowPeak.gz"], "H7_D3GARPpCrdcM_ATAC-seq": ["GSM2257299_ATAC15+16_IDR.narrowPeak.gz"], "H7_dreived_D2.25_Smtmrs_ATAC-seq": ["GSM2257300_ATAC21+22_IDR.narrowPeak.gz"], "82-kDa ChAT (Vehicle)": ["GSM1898100_ChAT_Control_minus_Control_input.bed.gz"], "82-kDa ChAT (A-beta)": ["GSM1898101_ChAT_AB_minus_AB_input.bed.gz"], "SATB1 (Vehicle)": ["GSM1898102_SATB1_Control_minus_Control_input.bed.gz"], "SATB1 (A-beta)": ["GSM1898103_SATB1_AB_minus_AB_input.bed.gz"]}, "sample_library_strategy": {"ATAC-seq": ["GSM4172937_LSD1i-2.bed.gz", "GSM4875724_NC3_shOTUD5_rep2-pr.idr0.05.bfilt.narrowPeak.gz", "GSM5012393_2064692_SKNAS-Vel-01.frag-free_peaks.narrowPeak.gz", 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"GSM2679037_pat_004_N1420_08_rk_cpgmeth.bed.gz", "GSM2679172_pat_042_N417_14_rk_cpgmeth.bed.gz", "GSM2679120_pat_024_N1844_13_rk_cpgmeth.bed.gz", "GSM2679104_pat_020_N1180_10_rk_cpgmeth.bed.gz", "GSM2679124_pat_026_N1814_09_rk_cpgmeth.bed.gz", "GSM2679161_pat_038_N225_09_rk_cpgmeth.bed.gz", "GSM2679132_pat_028_N1165_14_rk_cpgmeth.bed.gz", "GSM2679034_pat_003_N1109_10_rk_cpgmeth.bed.gz", "GSM2679130_pat_027_N886_12_rk_cpgmeth.bed.gz"], "frozen": ["GSM2679174_pat_042_N721_13_f_cpgmeth.bed.gz", "GSM3071801_pat_183_N922_12_fv_cpgmeth.bed.gz", "GSM2679111_pat_021_N845_13_f_cpgmeth.bed.gz", "GSM2679171_pat_042_N417_14_f_cpgmeth.bed.gz", "GSM2679129_pat_027_N886_12_f_cpgmeth.bed.gz"], "H7 human embryonic stem cells": ["GSM2257291_ATAC1+2_IDR.narrowPeak.gz"], "H7 human embryonic stem cells derived Anterior Primitive Streak (APS) cells": ["GSM2257292_ATAC3+4_IDR.narrowPeak.gz"], "H7 human embryonic stem cells derived Mid Primitive Streak (MPS) cells": ["GSM2257293_ATAC5+6_IDR.narrowPeak.gz"], "H7 human embryonic stem cells derived DLL1-positive paraxial mesoderm (DLL1pPXM) cells": ["GSM2257294_ATAC7+8_IDR.narrowPeak.gz"], "H7 human embryonic stem cells derived day 3 Early Somite (ESMT) cells": ["GSM2257295_ATAC13+14_IDR.narrowPeak.gz"], "H7 human embryonic stem cells derived Sclerotome (Sclrtm) cells": ["GSM2257296_ATAC11+12_IDR.narrowPeak.gz"], "H7 human embryonic stem cells derived day 5 Central Dermomyotome (D5CntrlDrmmtm) cells": ["GSM2257297_ATAC19+20_IDR.narrowPeak.gz"], "H7 human embryonic stem cells derived day 2 Lateral Mesoderm (D2LtM) cells": ["GSM2257298_ATAC9+10_IDR.narrowPeak.gz"], "H7 human embryonic stem cells derived day 3 GARP-positive Cardiac Mesoderm (D3GARPpCrdcM) cells": ["GSM2257299_ATAC15+16_IDR.narrowPeak.gz"], "H7 human embryonic stem cells derived day 2.25 Somitomeres (Smtmrs) cells": ["GSM2257300_ATAC21+22_IDR.narrowPeak.gz"]}, "disease_state": {"healthy": ["GSM5973977_N03.peaks.filtered.bed.gz", "GSM5973978_N04.peaks.filtered.bed.gz", "GSM5973976_N01.peaks.filtered.bed.gz"], "superimposed preeclampsia": ["GSM5973979_P02.peaks.filtered.bed.gz"], "non-metastatic colorectal cancer (CRC)": ["GSM6008267_TCF21_peaks.narrowPeak.gz"], "Castration resistant": ["GSM5553085_16D-CRPC-3d-ENZ-AccDNA-peak.narrowPeak.gz", "GSM5862245_16D-CRPC-3d-ENZ-AccDNA-Rep2-peak.narrowPeak.gz", "GSM5862249_16D-CRPC-10d-ENZ-AccDNA-Rep3-peak.narrowPeak.gz", "GSM5553084_16D-CRPC-0d-ENZ-AccDNA-peak.narrowPeak.gz", "GSM5862248_16D-CRPC-3d-ENZ-AccDNA-Rep3-peak.narrowPeak.gz", "GSM5553086_16D-CRPC-10d-ENZ-AccDNA-peak.narrowPeak.gz", "GSM5862246_16D-CRPC-10d-ENZ-AccDNA-Rep2-peak.narrowPeak.gz", "GSM5862244_16D-CRPC-0d-ENZ-AccDNA-Rep2-peak.narrowPeak.gz", "GSM5862247_16D-CRPC-0d-ENZ-AccDNA-Rep3-peak.narrowPeak.gz"], "AR positive, Neuro Endocrine like": ["GSM5553087_42D-ENZR-AccDNA-peak.narrowPeak.gz", "GSM5553089_42D-ENZR-shASCL1-AccDNA-peak.narrowPeak.gz"], "AR negative, Neuro Endocrine": ["GSM5553088_NCI-H660-AccDNA-peak.narrowPeak.gz"], "shASCL1": 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"GSM4974199_GBM002-P1C8_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974200_GBM002-P1C8_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974205_GBM002-P2D3-PBr-G34R_H3K36me3_1_peaks.broadPeak.gz", "GSM4974203_GBM002-P2D3-PBr-G34R_H3K27me3_1_peaks.broadPeak.gz", "GSM4974198_GBM002-P1C8_H3K36me3_2_peaks.broadPeak.gz", "GSM4974196_GBM002-P1C8_H3K27me3_2_peaks.broadPeak.gz", "GSM4974216_GBM002-P2D3-PBr-WT_H3K36me3_2_peaks.broadPeak.gz", "GSM4974221_GBM002-P2D3-PBr-WT_v5-tag_1_peaks.broadPeak.gz", "GSM4974224_GBM002-Parental_G34R_2_peaks.broadPeak.gz", "GSM4974229_GBM002-Parental_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974208_GBM002-P2D3-PBr-G34R_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974204_GBM002-P2D3-PBr-G34R_H3K27me3_2_peaks.broadPeak.gz", "GSM4974195_GBM002-P1C8_H3K27me3_1_peaks.broadPeak.gz", "GSM4974218_GBM002-P2D3-PBr-WT_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974193_GBM002-P1C8_G34R_1_peaks.broadPeak.gz", "GSM4974225_GBM002-Parental_H3K27me3_1_peaks.broadPeak.gz", "GSM4974228_GBM002-Parental_H3K36me3_2_peaks.broadPeak.gz", "GSM4974227_GBM002-Parental_H3K36me3_1_peaks.broadPeak.gz"], "Healthy": ["GSM4819759_95_L.bed.gz", "GSM4819755_92_L.bed.gz", "GSM4819757_94_L.bed.gz", "GSM4819754_92_H.bed.gz", "GSM4819756_94_H.bed.gz", "GSM4819758_95_H.bed.gz"], "dysplastic chronic myelomonocytic leukemia": ["GSM4910551_12FMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910538_06MMDN_H3K04ME3_PEAKS.bed.bz2", "GSM4910549_12FMPN_H3K04ME1_PEAKS.bed.bz2", "GSM4910542_07FMDY_H3K04ME3_PEAKS.bed.bz2", "GSM4910539_06MMDN_H3K27ME3_PEAKS.bed.bz2", "GSM4910555_13MMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910537_06MMDN_H3K04ME1_PEAKS.bed.bz2", "GSM4910547_11MMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910558_18MMPN_H3K04ME3_PEAKS.bed.bz2", "GSM4910559_18MMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910546_11MMDN_H3K04ME3_PEAKS.bed.bz2", "GSM4910554_13MMPN_H3K04ME3_PEAKS.bed.bz2", "GSM4910545_11MMDN_H3K04ME1_PEAKS.bed.bz2", "GSM4910543_07FMDY_H3K27ME3_PEAKS.bed.bz2", "GSM4910553_13MMPN_H3K04ME1_PEAKS.bed.bz2", 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"GSM4831433_CNOT1_KO_3_Hisat2-mapping_3prime-ends.bed.gz", "GSM4721542_WSNdelNS1_Pol2_peaks.narrowPeak.gz", "GSM5429722_BIOCHIP_CPM_POSITIVE_HLCs_rep6.bed.gz", "GSM4878594_Panc1_bruseq_rep3.genes.bed.gz", "GSM4878567_HCT116_bruseq_rep5.genes.bed.gz", "GSM4059133_iPSC_CONTROL_rep1.bed.gz", "GSM4878571_HeLa_bruseq_rep4.genes.bed.gz", "GSM2464905_1806N.bed.gz", "GSM5429714_BIOCHIP_NON_SORTED_HLCs_rep2.bed.gz", "GSM3762927_B2.cluster.bed.gz", "GSM4318405_D597A_with_siTP53_clusters.bed.gz"]}, "sample_source_name_ch1": {"cord blood": ["GSM5973977_N03.peaks.filtered.bed.gz", "GSM5973978_N04.peaks.filtered.bed.gz", "GSM5973976_N01.peaks.filtered.bed.gz", "GSM5973979_P02.peaks.filtered.bed.gz"], "NK_ChIP": ["GSM5255997_NK_RUNX2_peaks.narrowPeak.gz", "GSM3520734_ETS1_NK_peaks.narrowPeak.gz"], "SNU638": ["GSM6203247_snu638.peak.bed.gz"], "Fetal erythroblasts": ["GSM5530950_3437_peaks_clean.bed.gz", "GSM5530949_3429_peaks_clean.bed.gz", "GSM5530946_3442_peaks_clean.bed.gz", "GSM5530945_3434_peaks_clean.bed.gz"], "Adult erythroblasts": ["GSM5530952_3422_peaks_clean.bed.gz", "GSM5530951_3415_peaks_clean.bed.gz", "GSM5530948_3426_peaks_clean.bed.gz", "GSM5530947_3419_peaks_clean.bed.gz"], "HUDEP2 cells": ["GSM5271216_3326_peaks_clean.bed.gz", "GSM5271205_3133_peaks_clean.bed.gz", "GSM5271211_3279_peaks_clean.bed.gz", "GSM5271209_3139_peaks_clean.bed.gz", "GSM5271214_3325_peaks_clean.bed.gz", "GSM5271213_3324_peaks_clean.bed.gz", "GSM5271217_3327_peaks_clean.bed.gz", "GSM5271206_3134_peaks_clean.bed.gz", "GSM5271207_3278_peaks_clean.bed.gz", "GSM5271210_3140_peaks_clean.bed.gz"], "HUDEP1 cells": ["GSM5271220_3284_peaks_clean.bed.gz", "GSM5271219_3283_peaks_clean.bed.gz", "GSM5271223_3287_peaks_clean.bed.gz", "GSM5271222_3286_peaks_clean.bed.gz"], "Cord blood erythroblasts": ["GSM5800046_3890_peaks_clean.bed.gz"], "MCF7": ["GSM6125888_s118a-2_VG-3_S199.bed.gz", "GSM6125841_CE-G_merge.bed.gz", "GSM3861548_MCF7_r2.txn_units.bed.gz", "GSM3861547_MCF7_r1.txn_units.bed.gz", "GSM3861550_MCF7_r4.txn_units.bed.gz", "GSM6125883_s118a-2_EG-1_S194.bed.gz", "GSM6125893_WT_VG-2_S205.bed.gz", "GSM3417121_gv_001_02_01_chipseq_peaks.narrowPeak.gz", "GSM5501246_SINAH10.cellranger.peak.bed.gz", "GSM6125884_s118a-2_EG-2_S195.bed.gz", "GSM6125889_WT_EG-1_S201.bed.gz", "GSM6125892_WT_VG-1_S204.bed.gz", "GSM6125846_CV-ER_merge.bed.gz", "GSM6125844_CE-SC_merge.bed.gz", "GSM6125868_GV-ER_merge.bed.gz", "GSM6125885_s118a-2_EG-3_S196.bed.gz", "GSM6125891_WT_EG-3_S203.bed.gz", "GSM6125874_GV-SC_merge.bed.gz", "GSM6125880_s118a-1_VG-1_S191.bed.gz", "GSM6125886_s118a-2_VG-1_S197.bed.gz", "GSM3417122_gv_003_01_01_chipseq_peaks.narrowPeak.gz", "GSM3861549_MCF7_r3.txn_units.bed.gz", "GSM6125890_WT_EG-2_S202.bed.gz", "GSM6125879_s118a-1_EG-3_S190.bed.gz", "GSM6125855_CV-IgG_merge.bed.gz", "GSM3861551_MCF7_r5.txn_units.bed.gz", "GSM6125849_CV-G_merge.bed.gz", "GSM6125866_GE-SC_merge.bed.gz", "GSM6125877_s118a-1_EG-1_S188.bed.gz", "GSM6125858_CV-SC_merge.bed.gz", "GSM6125878_s118a-1_EG-2_S189.bed.gz", "GSM3417123_gv_004_01_01_chipseq_peaks.narrowPeak.gz", "GSM6125894_WT_VG-3_S206.bed.gz", "GSM6125882_s118a-1_VG-3_S193.bed.gz", "GSM6125863_GE-G_merge.bed.gz", "GSM6125887_s118a-2_VG-2_S198.bed.gz", "GSM6125860_GE-ER_merge.bed.gz", "GSM3417124_gv_005_01_01_chipseq_peaks.narrowPeak.gz", "GSM6125881_s118a-1_VG-2_S192.bed.gz", "GSM6125838_CE-ER_merge.bed.gz", "GSM5501247_SINAH1.cellranger.peak.bed.gz", "GSM6125871_GV-G_merge.bed.gz"], "EBV negative Akata": ["GSM6131565_ANBRD7VSANINPUT_peaks.narrowPeak.gz"], "EBV positive Akata": ["GSM6131567_APBRD7VSAPINPUT_peaks.narrowPeak.gz"], "CD14+ Monocytes isolated from whole blood buffy coats": ["GSM5513659_step3.4_peakcall_ORN8L-D3.R1_peaks.narrowPeak.gz", "GSM5513654_step3.4_peakcall_Rest-D4.R1_peaks.narrowPeak.gz", "GSM5513653_step3.4_peakcall_Rest-D3.R1_peaks.narrowPeak.gz", "GSM5513660_step3.4_peakcall_ORN8L-D4.R1_peaks.narrowPeak.gz", "GSM5513656_step3.4_peakcall_CXCL4-D3.R1_peaks.narrowPeak.gz", "GSM5513663_step3.4_peakcall_CXCL4andORN8L-D4.R1_peaks.narrowPeak.gz", "GSM5513661_step3.4_peakcall_ORN8L-D5.R1_peaks.narrowPeak.gz", "GSM5513658_step3.4_peakcall_CXCL4-D5.R1_peaks.narrowPeak.gz", "GSM5513662_step3.4_peakcall_CXCL4andORN8L-D3.R1_peaks.narrowPeak.gz", "GSM5513657_step3.4_peakcall_CXCL4-D4.R1_peaks.narrowPeak.gz", "GSM5513655_step3.4_peakcall_Rest-D5.R1_peaks.narrowPeak.gz", "GSM5513664_step3.4_peakcall_CXCL4andORN8L-D5.R1_peaks.narrowPeak.gz"], "MCF7 cell line": ["GSM5373142_MCF7_Pol2_KD_E2.bed.gz", "GSM5373127_MCF7_Rad21_Ctrl.bed.gz", "GSM5373125_MCF7_Pol2ser2_Ctrl.bed.gz", "GSM3563754_MCF7_Y537S_E2_peaks.bed.gz", "GSM5373114_MCF7_CBP_Ctrl.bed.gz", "GSM5373120_MCF7_Mau2_Ctrl.bed.gz", "GSM5880291_New_MCF7_Pol2_Rad21KD_E2.peak.bed.gz", "GSM5373130_MCF7_TAF1_Ctrl.bed.gz", "GSM5880296_New_MCF7_Pol2ser2_Rad21KD_Ctrl.peak.bed.gz", "GSM5880288_New_MCF7_Pol2_NIPBLKD_Ctrl.peak.bed.gz", "GSM3563750_MCF7_WT_Vehicle_peaks.bed.gz", "GSM5373128_MCF7_Rad21_E2_30min.bed.gz", "GSM5373123_MCF7_Pol2_E2_30min.bed.gz", "GSM3563753_MCF7_Y537S_Vehicle_peaks.bed.gz", "GSM5373139_MCF7_p300_KD_Ctrl.bed.gz", "GSM5373124_MCF7_Pol2_E2_45min.bed.gz", "GSM5880293_New_MCF7_Pol2_WT_E2.peak.bed.gz", "GSM5373121_MCF7_Mau2_E2.bed.gz", "GSM5373129_MCF7_Rad21_E2_45min.bed.gz", "GSM5373148_MCF7_ER_E2.bed.gz", "GSM5880289_New_MCF7_Pol2_NIPBLKD_E2.peak.bed.gz", "GSM5880298_New_MCF7_Pol2ser2_WT_Ctrl.peak.bed.gz", "GSM5373141_MCF7_Pol2_KD_Ctrl.bed.gz", "GSM5880292_New_MCF7_Pol2_WT_Ctrl.peak.bed.gz", "GSM5880297_New_MCF7_Pol2ser2_Rad21KD_E2.peak.bed.gz", "GSM5373133_MCF7_p300_E2.bed.gz", "GSM5373137_MCF7_Mau2_KD_Ctrl.bed.gz", "GSM3563751_MCF7_WT_E2_peaks.bed.gz", "GSM5880290_New_MCF7_Pol2_Rad21KD_Ctrl.peak.bed.gz", "GSM5373147_MCF7_ER_Ctrl.bed.gz", "GSM5880294_New_MCF7_Pol2ser2_NIPBLKD_Ctrl.peak.bed.gz", "GSM5880299_New_MCF7_Pol2ser2_WT_E2.peak.bed.gz", "GSM5373118_MCF7_CTCF_Ctrl.bed.gz", "GSM3563757_MCF7_D538G_E2_peaks.bed.gz", "GSM5880295_New_MCF7_Pol2ser2_NIPBLKD_E2.peak.bed.gz", "GSM5373117_MCF7_AFF4_E2.bed.gz", "GSM5373119_MCF7_CTCF_E2.bed.gz", "GSM5373116_MCF7_AFF4_Ctrl.bed.gz", "GSM5373144_MCF7_Pol2ser2_KD_E2.bed.gz", "GSM3563756_MCF7_D538G_Vehicle_peaks.bed.gz", "GSM5373132_MCF7_p300_Ctrl.bed.gz", "GSM5373140_MCF7_p300_KD_E2.bed.gz", "GSM5373145_MCF7_CBP_KD_Ctrl.bed.gz", "GSM5373122_MCF7_Pol2_Ctrl.bed.gz", "GSM5373138_MCF7_Mau2_KD_E2.bed.gz", "GSM5373143_MCF7_Pol2ser2_KD_Ctrl.bed.gz", "GSM5373115_MCF7_CBP_E2.bed.gz", "GSM5373126_MCF7_Pol2ser2_E2.bed.gz", "GSM5373146_MCF7_CBP_KD_E2.bed.gz", "GSM5373131_MCF7_TAF1_E2.bed.gz"], "293T cell line": ["GSM5373149_293T_Rad21_WT.bed.gz"], "Bcell": ["GSM5373150_Bcell_Rad21_WT.bed.gz"], "Healthy Fibroblast": ["GSM5373191_Fibroblast_Pol2ser5_Normal.bed.gz", "GSM5373151_Fibroblast_Rad21_WT.bed.gz", "GSM5373185_Fibroblast_NIPBL_Normal.bed.gz", "GSM5373182_Fibroblast_H3K27ac_Normal.bed.gz", "GSM5373188_Fibroblast_Pol2_Normal.bed.gz", "GSM5373179_Fibroblast_AFF4_Normal.bed.gz", "GSM5373194_Fibroblast_Rad21_Normal.bed.gz"], "RPE1 cell line": ["GSM5373165_RPE_Pol2ser2_FBS-.bed.gz", "GSM5373171_RPE_K27ac.bed.gz", "GSM5373152_RPE_Rad21_WT.bed.gz", "GSM5373164_RPE_Pol2_FBS+.bed.gz", "GSM5373159_RPE_Rad21_FBS+DRB.bed.gz", "GSM5373155_RPE_Rad21_FBS-.bed.gz", "GSM5880300_New_RPE_Rad21_FBS+.peak.bed.gz", "GSM5373157_RPE_Rad21_DRB-.bed.gz", "GSM5373169_RPE_Med1_FBS-.bed.gz", "GSM5373163_RPE_Pol2_FBS-.bed.gz", "GSM5373156_RPE_Rad21_FBS+.bed.gz", "GSM5373162_RPE_CTCF.bed.gz", "GSM5880301_New_RPE_Rad21_FBS-.peak.bed.gz", "GSM5373158_RPE_Rad21_DRB+.bed.gz", "GSM5373170_RPE_Med1_FBS+.bed.gz", "GSM5373161_RPE_SA1_FBS+.bed.gz", "GSM5373160_RPE_SA1_FBS-.bed.gz", "GSM5373168_RPE_Mau2_FBS+.bed.gz", "GSM5373167_RPE_Mau2_FBS-.bed.gz", "GSM5373166_RPE_Pol2ser2_FBS+.bed.gz"], "HeLa cell line": ["GSM5373153_HeLa_Rad21_WT_rep1.bed.gz", "GSM5373154_HeLa_Rad21_WT_rep2.bed.gz"], "CdLS Fibroblast": ["GSM5373186_Fibroblast_Pol2_CdLS.bed.gz", "GSM5373189_Fibroblast_Pol2ser5_CdLS.bed.gz", "GSM5373180_Fibroblast_H3K27ac_CdLS.bed.gz", "GSM5373192_Fibroblast_Rad21_CdLS.bed.gz", "GSM5373177_Fibroblast_AFF4_CdLS.bed.gz", "GSM5373183_Fibroblast_NIPBL_CdLS.bed.gz"], "CHOPS Fibroblast": ["GSM5373190_Fibroblast_Pol2ser5_CHOPS.bed.gz", "GSM5373193_Fibroblast_Rad21_CHOPS.bed.gz", "GSM5373184_Fibroblast_NIPBL_CHOPS.bed.gz", "GSM5373181_Fibroblast_H3K27ac_CHOPS.bed.gz", "GSM5373187_Fibroblast_Pol2_CHOPS.bed.gz", "GSM5373178_Fibroblast_AFF4_CHOPS.bed.gz"], "Huh 7": ["GSM5597555_Huh7_H3K4me3_summits.bed.gz", "GSM5597557_Huh7_ATAC_summits.bed.gz", "GSM5621761_CUTTag_Huh7_PLRG1_summits.bed.gz", "GSM5621760_CUTTag_Huh7_DHX37_summits.bed.gz", "GSM5597566_H7_P300_summits.bed.gz", "GSM5597568_H7_NCOA3_summits.bed.gz", "GSM5621758_ChIPseq_Huh7_siDHX37_H3K27ac_summits.bed.gz", "GSM5597567_H7_SP1_summits.bed.gz", "GSM5597554_Huh7_H3K4me1_summits.bed.gz", "GSM5621756_ChIPseq_Huh7_siNC_H3K27ac_summits.bed.gz", "GSM5597553_Huh7_H3K27ac_summits.bed.gz"], "small cell lung cancer tuft variant": ["GSM5657731_NCIH1048_CST_S3_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz", "GSM5657743_NCIH211_OCA-T_Ab2_S7_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657745_NCIH211_POU2F3_Ab1_S9_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657747_NCIH211_POU2F3_Rb_2_S2_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657754_NCIH526_POU2F3_Rb_2_S2_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz", "GSM5657729_CORL311_POU2F3-Rb2_S7_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657746_NCIH211_POU2F3_ChIP_S1_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657752_NCIH526_OCA-T_Ab2_S5_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz", "GSM5657742_NCIH211_OCA-T_Ab1_S8_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657727_CORL311_OCAT-P_F-2_S6_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657751_NCIH526_OCA-T_Ab1_S6_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz", "GSM5657737_NCIH211_Cherry_FL_HA_S3_R1_001.fastq_merged.gz_peaks.narrowPeak.gz", "GSM5657728_CORL311_POU2F3-P_F-1_S3_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657730_NCIH1048_12CA5_S2_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz", "GSM5657753_NCIH526_POU2F3_PF_Ab1_S3_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz", "GSM5657726_CORL311_OCAT-P_F-1_S5_R1_001.fastq.gz_peaks.narrowPeak.gz"], "Liver cancer cells": ["GSM5765172_Sora-ATAC-1_peaks.sort.narrowPeak.gz", "GSM5765173_Sora-ATAC-2_peaks.sort.narrowPeak.gz", "GSM5765170_DMSO-ATAC-1_peaks.sort.narrowPeak.gz", "GSM5765171_DMSO-ATAC-2_peaks.sort.narrowPeak.gz"], "Hela cell": ["GSM4504493_hela-AMT-unique-peaks.bed.gz", "GSM4504493_hela-AMT-peaks.bed.gz"], "WTC CRISPRi GCaMP hiPSC (RRID CVCL_VM38)": ["GSM6043950_C1_1_S9.narrowPeak.txt.gz", "GSM6043948_B2_2_S5.narrowPeak.txt.gz", "GSM6043949_B3_2_S4.narrowPeak.txt.gz", "GSM6043951_C2_2_S8.narrowPeak.txt.gz", "GSM6043952_C3_2_S7.narrowPeak.txt.gz", "GSM6043954_M2_2_S2.narrowPeak.txt.gz", "GSM6043953_M1_1_S3.narrowPeak.txt.gz", "GSM6043955_M3_2_S1.narrowPeak.txt.gz", "GSM6043947_B1_2_S6.narrowPeak.txt.gz"], "hTSC CT27": ["GSM6043300_hTSC_ChIP_H3K27ac_peaks.bed.gz", "GSM6043302_hTSC_ChIP_H3K4me3_peaks.bed.gz", "GSM6043301_hTSC_ChIP_H3K4me1_peaks.bed.gz"], "hTSC CT29": ["GSM6043304_hTSC_CutRun_GATA3_peaks.bed.gz", "GSM6043309_hTSC_CutRun_TFAP2C_peaks.bed.gz", "GSM6043306_hTSC_CutRun_H3K9me3_peaks.bed.gz", "GSM6043305_hTSC_CutRun_H3K27me3_peaks.bed.gz", "GSM6043308_hTSC_CutRun_TEAD4_peaks.bed.gz"], "U87 REST ChIPseq IDH1wt": ["GSM5291620_RAG_F11_0003_P12_V11.narrowPeak.gz", "GSM5291624_RAG_F11_0007_P12_V11.narrowPeak.gz"], "U87 REST ChIPseq IDH1mut": ["GSM5291625_RAG_F31_0008_P12_V11.narrowPeak.gz", "GSM5291621_RAG_F31_0004_P12_V11.narrowPeak.gz"], "BATF ChIP-seq": ["GSM5328651_BATF_R3_peaks.narrowPeak.gz", "GSM5328649_BATF_R1_peaks.narrowPeak.gz"], "FOSL1 ChIP-seq": ["GSM5328655_FOSL1_C-12_R2_peaks.narrowPeak.gz", "GSM5328653_FOSL1_C-12_R1_peaks.narrowPeak.gz"], "FOSL2 ChIP-seq": ["GSM5328659_FOSL2_R2_peaks.narrowPeak.gz", "GSM5328657_FOSL2_R1_peaks.narrowPeak.gz"], "Patient-derived organoid": ["GSM4998578_5201_peaks_peaks.narrowPeak.gz", "GSM4998579_5202_peaks_peaks.narrowPeak.gz"], "Tumor tissue": ["GSM6008267_TCF21_peaks.narrowPeak.gz"], "HEK293T": ["GSM3715312_RM_CTCF_KD_peaks.bed.gz", "GSM6008192_Dot1L_rep1.frag_bin.bed.gz", "GSM6008197_siDot1L-OGT_rep2.frag_bin.bed.gz", "GSM6008188_IgG_rep1.frag_bin.bed.gz", "GSM3715315_H3K4me3_KD_peaks.bed.gz", "GSM3715314_H3K4me3_CT_peaks.bed.gz", "GSM3715313_RM_CTCF_OE_peaks.bed.gz", "GSM6008195_siNC-OGT_rep2.frag_bin.bed.gz", "GSM3715320_Input_peaks.bed.gz", "GSM3715318_H3K27me3_CT_peaks.bed.gz", "GSM6008190_OGT_rep1.frag_bin.bed.gz", "GSM3715317_H3K9me3_KD_peaks.bed.gz", "GSM3715311_RM_CTCF_CT_peaks.bed.gz", "GSM3715313_CTCF_OE_peaks.bed.gz", "GSM2584474_PFV_4comp_RQ_293T_July2016_PL6_2bp_hg38.bed.gz", "GSM3715312_CTCF_KD_peaks.bed.gz", "GSM6008194_siNC-OGT_rep1.frag_bin.bed.gz", "GSM3715311_CTCF_CT_peaks.bed.gz", "GSM6008191_OGT_rep2.frag_bin.bed.gz", "GSM6008193_Dot1L_rep2.frag_bin.bed.gz", "GSM6008196_siDot1L-OGT_rep1.frag_bin.bed.gz", "GSM3715319_H3K27me3_KD_peaks.bed.gz", "GSM2584473_PFV_4comp_WT_293T_July2016_PL5_2bp_hg38.bed.gz", "GSM6008189_IgG_rep2.frag_bin.bed.gz", "GSM3715316_H3K9me3_CT_peaks.bed.gz"], "Cell Line": ["GSM5777994_X17_07BV_00YDAZ_H1975-Osim-AZD-2_H3K27Ac_hs_i56_peaks.narrowPeak.gz", "GSM5777985_X4c_3519AZ_H1975_Combo-NF_peaks.narrowPeak.gz", "GSM5777968_X5a_3562AZ_HCC2935_DTP-NF_peaks.narrowPeak.gz", "GSM5777974_X1a_3519AZ_H1975_DMSO-NF_peaks.narrowPeak.gz", "GSM5777989_X12_07BR_00YDAZ_H1975-DMSO-3_H3K27Ac_hs_i52_peaks.narrowPeak.gz", "GSM5777970_X5c_3562AZ_HCC2935_DTP-NF_peaks.narrowPeak.gz", "GSM5777950_X7a_3519AZ_PC9_5153-NF_peaks.narrowPeak.gz", "GSM5777982_X3c_3519AZ_H1975_5153-NF_peaks.narrowPeak.gz", "GSM5777947_X6a_3519AZ_PC9_9291-NF_peaks.narrowPeak.gz", "GSM5777963_X3b_3562AZ_HCC827_DTP-5153-NF_peaks.narrowPeak.gz", "GSM5777988_X11_07BQ_00YDAZ_H1975-DMSO-2_H3K27Ac_hs_i50_peaks.narrowPeak.gz", "GSM5777966_X4b_3562AZ_HCC2935_CTRL-NF_peaks.narrowPeak.gz", "GSM5777961_X2c_3562AZ_HCC827_DTP-NF_peaks.narrowPeak.gz", "GSM5777992_X15_07C0_00YDAZ_H1875-Osim-3_H3K27Ac_hs_i60_peaks.narrowPeak.gz", "GSM5777951_X7b_3519AZ_PC9_5153-NF_peaks.narrowPeak.gz", "GSM5777979_X2c_3519AZ_H1975_9291-NF_peaks.narrowPeak.gz", "GSM5777948_X6b_3519AZ_PC9_9291-NF_peaks.narrowPeak.gz", "GSM5777973_X6c_3562AZ_HCC2935_DTP-5153-NF_peaks.narrowPeak.gz", "GSM5777965_X4a_3562AZ_HCC2935_CTRL-NF_peaks.narrowPeak.gz", "GSM5777953_X8a_3519AZ_PC9_Combo-NF_peaks.narrowPeak.gz", "GSM5777975_X1b_3519AZ_H1975_DMSO-NF_peaks.narrowPeak.gz", "GSM5777959_X2a_3562AZ_HCC827_DTP-NF_peaks.narrowPeak.gz", "GSM5777944_X5a_3519AZ_PC9_DMSO-NF_peaks.narrowPeak.gz", "GSM5777955_X8c_3519AZ_PC9_Combo-NF_peaks.narrowPeak.gz", "GSM5777957_X1b_3562AZ_HCC827_CTRL-NF_peaks.narrowPeak.gz", "GSM5777980_X3a_3519AZ_H1975_5153-NF_peaks.narrowPeak.gz", "GSM5777995_X18_07BW_00YDAZ_H1975-Osim-AZD-3_H3K27Ac_hs_i57_peaks.narrowPeak.gz", "GSM5777971_X6a_3562AZ_HCC2935_DTP-5153-NF_peaks.narrowPeak.gz", "GSM5777954_X8b_3519AZ_PC9_Combo-NF_peaks.narrowPeak.gz", "GSM5777991_X14_07BT_00YDAZ_H1975-Osim-2_H3K27Ac_hs_i54_peaks.narrowPeak.gz", "GSM5777972_X6b_3562AZ_HCC2935_DTP-5153-NF_peaks.narrowPeak.gz", "GSM5777993_X16_07BU_00YDAZ_H1975-Osim-AZD-1_H3K27Ac_hs_i55_peaks.narrowPeak.gz", "GSM5777969_X5b_3562AZ_HCC2935_DTP-NF_peaks.narrowPeak.gz", "GSM5777978_X2b_3519AZ_H1975_9291-NF_peaks.narrowPeak.gz", "GSM5777958_X1c_3562AZ_HCC827_CTRL-NF_peaks.narrowPeak.gz", "GSM5777987_X10_07BP_00YDAZ_H1975-DMSO-1_H3K27Ac_hs_i49_peaks.narrowPeak.gz", "GSM5777962_X3a_3562AZ_HCC827_DTP-5153-NF_peaks.narrowPeak.gz", "GSM5777967_X4c_3562AZ_HCC2935_CTRL-NF_peaks.narrowPeak.gz", "GSM5777981_X3b_3519AZ_H1975_5153-NF_peaks.narrowPeak.gz", "GSM5777946_X5c_3519AZ_PC9_DMSO-NF_peaks.narrowPeak.gz", "GSM5777945_X5b_3519AZ_PC9_DMSO-NF_peaks.narrowPeak.gz", "GSM5777949_X6c_3519AZ_PC9_9291-NF_peaks.narrowPeak.gz", "GSM5777983_X4a_3519AZ_H1975_Combo-NF_peaks.narrowPeak.gz", "GSM5777977_X2a_3519AZ_H1975_9291-NF_peaks.narrowPeak.gz", "GSM5777952_X7c_3519AZ_PC9_5153-NF_peaks.narrowPeak.gz", "GSM5777976_X1c_3519AZ_H1975_DMSO-NF_peaks.narrowPeak.gz", "GSM5777984_X4b_3519AZ_H1975_Combo-NF_peaks.narrowPeak.gz", "GSM5777964_X3c_3562AZ_HCC827_DTP-5153-NF_peaks.narrowPeak.gz", "GSM5777960_X2b_3562AZ_HCC827_DTP-NF_peaks.narrowPeak.gz", "GSM5777956_X1a_3562AZ_HCC827_CTRL-NF_peaks.narrowPeak.gz", "GSM5777990_X13_07BS_00YDAZ_H1975-Osim-1_H3K27Ac_hs_i53_peaks.narrowPeak.gz"], "Primary human hepatocytes": ["GSM5611548_20200304_Donor2_H3K27AC_KL7876_S32_keepdup1_peaks.narrowPeak.bed.gz", "GSM5611543_Primary_hepatocytes_ATAC_seq_MACS2.bed.gz", "GSM5611547_20200304_AQL_H3K27AC_KL7876_S31_keepdup1_peaks.narrowPeak.bed.gz"], "2D hPSC-hepatocytes": ["GSM5611549_20200304_HM_2D_20180906_H3K27AC_KL7876_S25_keepdup1_peaks.narrowPeak.bed.gz", "GSM5611550_20200304_HM_2D_2020_H3K27AC_KL7876_S26_keepdup1_peaks.narrowPeak.bed.gz", "GSM5611544_2D_PSC_hepatocytes_ATAC_seq_MACS2.bed.gz"], "3D hPSC-hepatocytes-S4": ["GSM5611545_3D_PSC_hepatocytes_ATAC_seq_MACS2.bed.gz", "GSM5611551_20191030_Hepatocytes_3D-H3K27AC_KL7532_S5_keepdup1_peaks.narrowPeak.bed.gz"], "3D hPSC-hepatocytes-S5": ["GSM5611552_20200304_HM_3D_2020_H3K27AC_KL7876_S27_keepdup1_peaks.narrowPeak.bed.gz"], "H1 ES cells": ["GSM5611553_H1_H3K27Ac_keepdup1_peaks.narrowPeak.bed.gz"], "Triple negative breast cancer cells": ["GSM4151571_ChIP_seq_mH2A1_peaks.bed.gz", "GSM4151570_ChIP_seq_mH2A1.1_peaks.bed.gz"], "16D Prostate cancer cell line generated from mouse xenograft of LNCaP": ["GSM5553085_16D-CRPC-3d-ENZ-AccDNA-peak.narrowPeak.gz", "GSM5862245_16D-CRPC-3d-ENZ-AccDNA-Rep2-peak.narrowPeak.gz", "GSM5553108_16D-CRPC-H3K27me3-ChIP-broad_peaks.broadPeak.gz", "GSM5553084_16D-CRPC-0d-ENZ-AccDNA-peak.narrowPeak.gz", "GSM5862248_16D-CRPC-3d-ENZ-AccDNA-Rep3-peak.narrowPeak.gz", "GSM5862249_16D-CRPC-10d-ENZ-AccDNA-Rep3-peak.narrowPeak.gz", "GSM5553086_16D-CRPC-10d-ENZ-AccDNA-peak.narrowPeak.gz", "GSM5862246_16D-CRPC-10d-ENZ-AccDNA-Rep2-peak.narrowPeak.gz", "GSM5862244_16D-CRPC-0d-ENZ-AccDNA-Rep2-peak.narrowPeak.gz", "GSM5862247_16D-CRPC-0d-ENZ-AccDNA-Rep3-peak.narrowPeak.gz"], "42D Prostate cancer cell line generated from mouse xenograft of LNCaP": ["GSM5553089_42D-ENZR-shASCL1-AccDNA-peak.narrowPeak.gz", "GSM5553087_42D-ENZR-AccDNA-peak.narrowPeak.gz", "GSM5553106_42D-ENZR-shASCL1-EZH2-ChIP-broad_peaks.broadPeak.gz", "GSM5553101_42D-ENZR-ASCL1-ChIP-peak.narrowPeak.gz", "GSM5553105_42D-ENZR-shASCL1-H3K27me3-ChIP-broad_peaks.broadPeak.gz"], "Cell line generated from patient (ATCC CRL-5813)": ["GSM5553103_NCI-H660-ASCL1-ChIP-peak.narrowPeak.gz", "GSM5553088_NCI-H660-AccDNA-peak.narrowPeak.gz"], "MRC5 fibroblast cells": ["GSM5566215_peaks.bed.gz"], "Neuroblastoma cells": ["GSM5835586_GNE987-10nM-H3K27ac_peaks.narrowPeak.gz"], "Human primary adipose stem cells": ["GSM5605584_H3K27ac_T04_1-2_peaks.narrowPeak.gz", "GSM5605588_H3K27ac_T20_1-2_peaks.narrowPeak.gz", "GSM5605618_Dm2_LMNB1_Rep1_peaks.bed.gz", "GSM5605602_H3K4me1_T24_1_2_peaks.broadPeak.gz", "GSM5605625_D3_LMNB1_Rep3_peaks.bed.gz", "GSM5605594_H3K4me1_T08_1_2_peaks.broadPeak.gz", "GSM5605596_H3K4me1_T12_1_2_peaks.broadPeak.gz", "GSM5605590_H3K4me1_T00_1_2_peaks.broadPeak.gz", "GSM5605587_H3K27ac_T16_1-2_peaks.narrowPeak.gz", "GSM5605623_D1_LMNB1_Rep3_peaks.bed.gz", "GSM5605634_H3K4me3_T16_1-2_peaks.narrowPeak.sorted.bed.gz", "GSM5605632_H3K4me3_T08_1-2_peaks.narrowPeak.sorted.bed.gz", "GSM5605624_D3_LMNB1_Rep2_peaks.bed.gz", "GSM5605589_H3K27ac_T24_1-2_peaks.narrowPeak.gz", "GSM5605630_H3K4me3_T00_1-2_peaks.narrowPeak.sorted.bed.gz", "GSM5862378_T72_H3K4me3_peaks.narrowPeak.gz", "GSM5605621_D0_LMNB1_Rep3_peaks.bed.gz", "GSM5605636_H3K4me3_T24_1-2_peaks.narrowPeak.sorted.bed.gz", "GSM5605635_H3K4me3_T20_1-2_peaks.narrowPeak.sorted.bed.gz", "GSM5605631_H3K4me3_T04_1-2_peaks.narrowPeak.sorted.bed.gz", "GSM5862377_T72_H3K27ac_peaks.narrowPeak.gz", "GSM5605586_H3K27ac_T12_1-2_peaks.narrowPeak.gz", "GSM5605598_H3K4me1_T16_1_2_peaks.broadPeak.gz", "GSM5605600_H3K4me1_T20_1_2_peaks.broadPeak.gz", "GSM5605585_H3K27ac_T08_1-2_peaks.narrowPeak.gz", "GSM5862379_T72_H3K4me1_peaks.broadPeak.gz", "GSM5862380_T72_H3K4me1_peaks.broadPeak.gz", "GSM5605622_D1_LMNB1_Rep2_peaks.bed.gz", "GSM5605619_Dm2_LMNB1_Rep2_peaks.bed.gz", "GSM5605583_H3K27ac_T00_1-2_peaks.narrowPeak.gz", "GSM5605592_H3K4me1_T04_1_2_peaks.broadPeak.gz", "GSM5605633_H3K4me3_T12_1-2_peaks.narrowPeak.sorted.bed.gz", "GSM5605620_D0_LMNB1_Rep2_peaks.bed.gz"], "EV_Control": ["GSM5354440_EV1_S1_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz", "GSM5354430_Efa_3_S28_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354428_EFa_1_S18_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354429_EFa_2_S22_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354441_EV2_S2_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz", "GSM5354442_EV3_S3_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz"], "NLS1_HK2": ["GSM5354445_PAA3_S6_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz", "GSM5354433_PAA3_S27_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354443_PAA1_S4_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz", "GSM5354432_PAA2_S21_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354431_PAA1_S17_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354444_PAA2_S5_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz"], "KD_control": ["GSM5354436_OM_GFP3_S26_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354435_OM_GFP2_S24_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354434_OM_GFP1_S20_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Nuclear_HK2_KD": ["GSM5354438_OM_SH1_2_S23_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354437_OM_SH1_1_S19_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354439_OM_SH1_3_S25_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "NLS2_HK2": ["GSM5354448_NES3_S9_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz", "GSM5354447_NES2_S8_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz", "GSM5354446_NES1_S7_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz"], "SW480 colon cancer cells": ["GSM5481079_sw480_pcat2_insert_only.bed.gz"], "endometrial adenocarcinoma": ["GSM4140479_ag_008_01_01_chipseq_peaks.narrowPeak.gz", "GSM4140480_ag_009_01_01_chipseq_peaks.narrowPeak.gz", "GSM4140478_ag_007_01_01_chipseq_peaks.narrowPeak.gz"], "adult human dermal fibroblast": ["GSM5725001_PIB-HDFs-IRF8_hg38_rep2.bed.gz", "GSM5725002_PIB-HDFs-BATF3_hg38_rep2.bed.gz", "GSM5704555_PIB-HDFs_IRF8_hg38.bed.gz", "GSM5704559_BATF3-HDFs_BATF3_hg38.bed.gz", "GSM5725000_PIB-HDFs-PU-1_hg38_rep2.bed.gz", "GSM5704558_IRF8-HDFs_IRF8_hg38.bed.gz", "GSM5704554_PIB-HDFs_PU-1_hg38.bed.gz", "GSM5704557_PU-1-HDFs_PU-1_hg38.bed.gz", "GSM5704556_PIB-HDFs_BATF3_hg38.bed.gz"], "Endometriosis": ["GSM5934078_Endometrioid_375-Endo_H3K27ac_hg38.overlap.bfilt.narrowPeak.gz", "GSM5934079_Endometrioid_589-Endo_H3K27ac_hg38.overlap.bfilt.narrowPeak.gz"], "Stroma": ["GSM5934081_Endometrioid_589-St_H3K27ac_hg38.overlap.bfilt.narrowPeak.gz", "GSM5934080_Endometrioid_375-Str_H3K27ac_hg38.overlap.bfilt.narrowPeak.gz"], "Fallopian Tube": ["GSM5934084_06_FT19123-A-before_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934086_12_FT64090_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934082_01_FT19123-B-after_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934083_02_FT19123-B-before_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934085_05_L-FT19155-03_ATAC_hg38_peaks_filtered.bed.gz"], "Epithelial Ovarian Cancer": ["GSM5934092_08_s1382_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934089_09_s1040_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934093_03_s2640_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934091_07_s1070_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934094_06_s2722_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934095_02_s2904_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934087_09_OCT-511_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934090_05_s1048_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934097_10_s949_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934096_01_s3263_ATAC_hg38_peaks_filtered.bed.gz", "GSM5934088_04_s1015_ATAC_hg38_peaks_filtered.bed.gz"], "HeLa": ["GSM4878598_HeLa_bruChaseseq_rep2.genes.bed.gz", "GSM5645878_1h_Hpx_Control_rep1.bed.gz", "GSM5645887_Reox_Control_rep2.bed.gz", "GSM3104134_NONO_HeLa_2014_C5N7WANXX_CTATAC_L008_HRR0000005_R1.fastq.noadapt_m20_q2020.hg38_bowtie_v1_m1.filtered.sam.collapsed.PARalyzer_result.bed.all.bed.gz", "GSM4878599_HeLa_bruChaseseq_rep3.genes.bed.gz", "GSM3104135_SFPQ_HeLa_2014_C5N7WANXX_CTCAGA_L008_HRR0000009_R1.fastq.noadapt_m20_q2020.hg38_bowtie_v1_m1.filtered.sam.collapsed.PARalyzer_result.bed.all.bed.gz", "GSM5645885_24h_Hpx_siHIF1B_rep2.bed.gz", "GSM5645880_1h_Hpx_siHIF1B_rep1.bed.gz", "GSM5645879_1h_Hpx_Control_rep2.bed.gz", "GSM5645875_0h_Hpx_Control_rep2.bed.gz", "GSM4878573_HeLa_bruseq_rep6.genes.bed.gz", "GSM5645884_24h_Hpx_siHIF1B_rep1.bed.gz", "GSM5645882_24h_Hpx_Control_rep1.bed.gz", "GSM4878569_HeLa_bruseq_rep2.genes.bed.gz", "GSM4878574_HeLa_bruseq_rep7.genes.bed.gz", "GSM5645883_24h_Hpx_Control_rep2.bed.gz", "GSM4878597_HeLa_bruChaseseq_rep1.genes.bed.gz", "GSM5645876_0h_Hpx_siHIF1B_rep1.bed.gz", "GSM5645881_1h_Hpx_siHIF1B_rep2.bed.gz", "GSM4878572_HeLa_bruseq_rep5.genes.bed.gz", "GSM4878570_HeLa_bruseq_rep3.genes.bed.gz", "GSM4878571_HeLa_bruseq_rep4.genes.bed.gz", "GSM4878568_HeLa_bruseq_rep1.genes.bed.gz", "GSM5645886_Reox_Control_rep1.bed.gz", "GSM5645877_0h_Hpx_siHIF1B_rep2.bed.gz", "GSM5645874_0h_Hpx_Control_rep1.bed.gz"], "HeLa_control": ["GSM5638902_Control_rep2.bed.gz", "GSM5638901_Control_rep1.bed.gz"], "HeLa_VH298": ["GSM5638903_VH298_rep1.bed.gz", "GSM5638904_VH298_rep2.bed.gz"], "human liver cancer cell": ["GSM5569765_H3K79me3_C_peaks.broadPeak.gz", "GSM5569762_H3K79me3_peaks.broadPeak.gz", "GSM5569766_H3K79me3_OE_peaks.broadPeak.gz", "GSM5569763_H3K79me2_peaks.broadPeak.gz"], "HepG2": ["GSM2584475_PFV_4comp_WT_HepG2_July2016_PL9_2bp_hg38.bed.gz", "GSM5597552_HepG2_ATAC_summits.bed.gz", "GSM2584476_PFV_4comp_RQ_HepG2_July2016_PL10_2bp_hg38.bed.gz", "GSM5597548_HepG2_H3K27ac_summits.bed.gz", "GSM5597549_HepG2_H3K4me1_summits.bed.gz", "GSM5597550_HepG2_H3K4me3_summits.bed.gz"], "THP1": ["GSM5908233_CHIP-seq_THP1_SIRT1.bed.gz", "GSM5908232_CHIP-seq_THP1_H3K27ac.bed.gz"], "H9 hESCs": ["GSM5839471_TFIIIC_H9_hESCs_peaks.bed.gz", "GSM2816647_HS_Rad21_ChIPNexus_peaks.bed.gz", "GSM2816645_HS_CTCF_ChIPNexus_peaks.bed.gz", "GSM2816646_Rad21_ChIPNexus_peaks.bed.gz", "GSM2816644_CTCF_ChIPNexus_peaks.bed.gz"], "Clone M1": ["GSM5258441_M2.idr0.01.bfilt.narrowPeak.gz", "GSM5258440_M1.idr0.01.bfilt.narrowPeak.gz"], "Clone M2": ["GSM5258443_EM3.idr0.01.bfilt.narrowPeak.gz", "GSM5258442_E.idr0.01.bfilt.narrowPeak.gz"], "Clone E": ["GSM5258444_EM2.idr0.01.bfilt.narrowPeak.gz", "GSM5258445_EM1.idr0.01.bfilt.narrowPeak.gz"], "Clone EM3": ["GSM5258446_Parental.idr0.01.bfilt.narrowPeak.gz"], "H9 day7": ["GSM5463919_WT_H3K9me3_1_peaks100k.broadPeak.gz", "GSM5463920_WT_H3K9me3_2_peaks100k.broadPeak.gz", "GSM5463922_AHDC1KO_H3K9me3_2_peaks100k.broadPeak.gz", "GSM5463924_cterm_75s_1_genomecov_2_peaks_filterBL_peaks100K.narrowPeak.gz", "GSM5463921_AHDC1KO_H3K9me3_1_peaks100k.broadPeak.gz", "GSM5463923_cterm_60s_1_genomecov_2_peaks_filterBL_peaks100K.narrowPeak.gz"], "HEK293T cells infected with MVV vector": ["GSM5858470_WT_W_2bp_mar2020.bed.gz"], "LKO cells infected with MVV vector": ["GSM5858471_LKO_L_2bp_mar2020.bed.gz"], "LHKO cells infected with MVV vector": ["GSM5858472_LHKO_D_2bp_mar2020.bed.gz"], "A375 melanoma cells": ["GSM4832132_ChIP_JUNB_352_peaks.bed.gz", "GSM4832134_ChIP_JUNB_353_peaks.bed.gz"], "cell line": ["GSM5683959_H3K27ac_peaks.narrowPeak.gz", "GSM5683960_POL2_peaks.narrowPeak.gz"], "NK-92 MI cells": ["GSM5834091_NK92_HSF1_IP.summits.bed.gz", "GSM5834091_NK92_HSF1_IP.peaks.bed.gz"], "Coronary artery": ["GSM5681679_UVA005_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681661_UVA045_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681681_UVA039_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681672_UVA080_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681673_UVA015_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz", "GSM5681656_UVA079_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681667_UVA030_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681675_UVA069_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681682_UVA008_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz", "GSM5681651_UVA108_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681657_UVA009_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681669_UVA058_CA_ATAC_1_peaks_rmBlacklist.narrowPeak.gz", "GSM5681653_UVA007_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681671_UVA053_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681665_UVA057_CA_ATAC_3_peaks_rmBlacklist.narrowPeak.gz", "GSM5681677_UVA112_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681649_UVA019_CA_ATAC_3_peaks_rmBlacklist.narrowPeak.gz", "GSM5681650_UVA067_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681654_UVA066_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681652_UVA049_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681676_UVA094_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681664_UVA020_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz", "GSM5681680_UVA054_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681660_UVA027_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681670_UVA050_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681662_UVA023_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681659_UVA064_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681655_UVA083_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681663_UVA014_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz", "GSM5681666_UVA040_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681668_UVA046_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681658_UVA068_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681678_UVA061_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681674_UVA036_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681683_UVA062_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "Human primordial germ cell-like cells": ["GSM4836898_SOX17_hPGCLC_r3_peaks.narrowPeak.gz", "GSM4836897_SOX17_hPGCLC_r1_peaks.narrowPeak.gz", "GSM4836894_PRDM1_hPGCLC_r2_peaks.narrowPeak.gz", "GSM4836893_PRDM1_hPGCLC_r1_peaks.narrowPeak.gz"], "Definitive endoderm": ["GSM4836896_SOX17_hDE_r2_peaks.narrowPeak.gz", "GSM4836895_SOX17_hDE_r1_peaks.narrowPeak.gz"], "DU-145": ["GSM5465771_DU-145_Doxplus_r2_peaks.narrowPeak.gz", "GSM5465769_DU-145_Doxminus_r3_peaks.narrowPeak.gz", "GSM5465767_DU-145_Doxminus_r1_peaks.narrowPeak.gz", "GSM5465770_DU-145_Doxplus_r1_peaks.narrowPeak.gz", "GSM5465768_DU-145_Doxminus_r2_peaks.narrowPeak.gz", "GSM5465772_DU-145_Doxplus_r3_peaks.narrowPeak.gz"], "BT-549": ["GSM5465773_BT549_Doxminus_r1_peaks.narrowPeak.gz", "GSM5465775_BT549_Doxminus_r3_peaks.narrowPeak.gz", "GSM5465777_BT549_Doxplus_r2_peaks.narrowPeak.gz", "GSM5465778_BT549_Doxplus_r3_peaks.narrowPeak.gz", "GSM5465776_BT549_Doxplus_r1_peaks.narrowPeak.gz", "GSM5465774_BT549_Doxminus_r2_peaks.narrowPeak.gz"], "CD4": ["GSM5136369_JCIp2.TAD.10kb_20kb.2D.bed.gz", "GSM5136370_JCIp3.TAD.10kb_20kb.2D.bed.gz", "GSM5136368_JCIp1.TAD.10kb_20kb.2D.bed.gz"], "Primary fibroblast": ["GSM5203046_PrimaryFibroblasts_recovery_fusion_A-B_coord.bed.gz", "GSM5203044_PrimaryFibroblasts_37C_fusion_A-B_coord.bed.gz", "GSM5203045_PrimaryFibroblasts_40C_fusion_A-B_coord.bed.gz"], "HEK293T (stable cell line; non-targetting shRNA)": ["GSM5203048_CT_42C_fusion_A-B_coord.bed.gz", "GSM5203053_TP53BP1_0.2kb_bin_cov_CT_exclusive.bed.gz", "GSM5203049_CT_recovery_fusion_A-B_coord.bed.gz", "GSM5203047_CT_37C_fusion_A-B_coord.bed.gz"], "HEK293T (stable cell line; CGGBP1-targetting shRNA)": ["GSM5203052_KD_recovery_fusion_A-B_coord.bed.gz", "GSM5203051_KD_42C_fusion_A-B_coord.bed.gz", "GSM5203054_TP53BP1_0.2kb_bin_cov_KD_exclusive.bed.gz", "GSM5203050_KD_37C_fusion_A-B_coord.bed.gz"], "Acute lymphocytic leukemia cell line": ["GSM5769909_REH_2_H3K4me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769889_NALM6_3_H3K27me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769925_REHB_3_H3K27me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769920_REHB_1_H3K4me2_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769923_REHB_2_H3K4me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769924_REHB_3_H3K27me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769894_NALM6B_1_H3K4me2_1_SEACR.stringent.bed.gz", "GSM5769887_NALM6_2_H3K4me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769918_REHB_1_H3K4me2_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769882_NALM6_1_H3K4me2_1_SEACR.stringent.bed.gz", "GSM5769885_NALM6_2_H3K4me3_1_SEACR.stringent.bed.gz", "GSM5769912_REH_3_H3K27me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769922_REHB_2_H3K4me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769921_REHB_2_H3K4me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769884_NALM6_1_H3K4me2_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769907_REH_1_H3K4me2_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769890_NALM6_3_H3K27me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769902_NALM6B_3_H3K27me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769896_NALM6B_1_H3K4me2_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769886_NALM6_2_H3K4me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769926_REHB_3_H3K27me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769897_NALM6B_2_H3K4me3_1_SEACR.stringent.bed.gz", "GSM5769888_NALM6_3_H3K27me3_1_SEACR.stringent.bed.gz", "GSM5769913_REH_3_H3K27me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769899_NALM6B_2_H3K4me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769901_NALM6B_3_H3K27me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769910_REH_2_H3K4me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769898_NALM6B_2_H3K4me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769900_NALM6B_3_H3K27me3_1_SEACR.stringent.bed.gz", "GSM5769914_REH_3_H3K27me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769906_REH_1_H3K4me2_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769895_NALM6B_1_H3K4me2_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769908_REH_1_H3K4me2_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769911_REH_2_H3K4me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769919_REHB_1_H3K4me2_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769883_NALM6_1_H3K4me2_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Burkitt's lymphoma\u00a0cell line": ["GSM5769930_Raji_1_H3K4me2_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769949_RajiB_3_H3K27me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769943_RajiB_1_H3K4me2_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769937_Raji_3_H3K27me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769942_RajiB_1_H3K4me2_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769931_Raji_1_H3K4me2_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769947_RajiB_2_H3K4me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769932_Raji_1_H3K4me2_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769934_Raji_2_H3K4me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769936_Raji_3_H3K27me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769944_RajiB_1_H3K4me2_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769945_RajiB_2_H3K4me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769948_RajiB_3_H3K27me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769950_RajiB_3_H3K27me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769946_RajiB_2_H3K4me3_2_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769938_Raji_3_H3K27me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769935_Raji_2_H3K4me3_3_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz", "GSM5769933_Raji_2_H3K4me3_1_bowtie2.mapped_sorted_coverage_RPKM_seacr_s.peaks.stringent.bed.gz"], "Uveal melanoma cell": ["GSM5487676_OMM2.3-H3K79me2-rep1_peaks.narrowPeak.gz", "GSM5487677_OMM2.3-H3K79me2-rep2_peaks.narrowPeak.gz"], "Hela cells infected with a modified version of the tetracycline inducible LentiX vector carying RecF8-EGFP fusion.": ["GSM4830980_RecF8-EGFP.narrowPeak.gz"], "A basal-like breast cancer cell line, BT549": ["GSM5683277_208210211_sgS31_50.hg38.norm.q1e4_peaks.bed.gz", "GSM5398572_192193_2227_50.hg38.0319q5e2_peaks.woRandom.bed.gz", "GSM5683276_208210211_sgNC_50.hg38.norm.q1e4_peaks.bed.gz", "GSM5398570_192193_2430_50.hg38.0319q5e2_peaks.woRandom.bed.gz", "GSM5398571_192193_2126_50.hg38.0319q5e2_peaks.woRandom.bed.gz", "GSM5398573_192193_2531_50.hg38.0319q5e2_peaks.woRandom.bed.gz", "GSM5683278_208210211_sgS32_50.hg38.norm.q1e4_peaks.bed.gz", "GSM5398569_192193_2328_50.hg38.0319q5e2_peaks.woRandom.bed.gz"], "Gar15-13 Vehicle tumour": ["GSM5218298_Gar15-13_FOXA1_Veh_3_peaks.narrowPeak.gz", "GSM5218297_Gar15-13_FOXA1_Veh_2_peaks.narrowPeak.gz", "GSM5218281_IVC018_Gar15-13_Veh_4_ER_ChIP_peaks.narrowPeak.gz", "GSM5218280_IVC018_Gar15-13_Veh_3_ER_ChIP_peaks.narrowPeak.gz", "GSM5218299_Gar15-13_FOXA1_Veh_4_peaks.narrowPeak.gz", "GSM5218278_IVC018_Gar15-13_Veh_1_ER_ChIP_peaks.narrowPeak.gz", "GSM5218279_IVC018_Gar15-13_Veh_2_ER_ChIP_peaks.narrowPeak.gz", "GSM5218296_Gar15-13_FOXA1_Veh_1_peaks.narrowPeak.gz"], "Gar15-13 Decitabine tumour": ["GSM5218285_IVC018_Gar15-13_Decitabine_10_ER_ChIP_peaks.narrowPeak.gz", "GSM5218282_IVC018_Gar15-13_Decitabine_4_ER_ChIP_peaks.narrowPeak.gz", "GSM5218283_IVC018_Gar15-13_Decitabine_5_ER_ChIP_peaks.narrowPeak.gz", "GSM5218284_IVC018_Gar15-13_Decitabine_9_ER_ChIP_peaks.narrowPeak.gz"], "HCI005 Vehicle tumour": ["GSM5218287_PDXHCI005_Veh_1_ER_ChIP_peaks.narrowPeak.gz", "GSM5218288_PDXHCI005_Veh_2_ER_ChIP_peaks.narrowPeak.gz", "GSM5218291_PDXHCI005_Veh_pooled_input_peaks.narrowPeak.gz", "GSM5218290_PDXHCI005_Veh_4_ER_ChIP_peaks.narrowPeak.gz", "GSM5218289_PDXHCI005_Veh_3_ER_ChIP_peaks.narrowPeak.gz"], "HCI005 Decitabine tumour": ["GSM5218293_PDXHCI005_Dec_2_ER_ChIP_peaks.narrowPeak.gz", "GSM5218292_PDXHCI005_Dec_1_ER_ChIP_peaks.narrowPeak.gz", "GSM5218294_PDXHCI005_Dec_3_ER_ChIP_peaks.narrowPeak.gz", "GSM5218295_PDXHCI005_Dec_pooled_input_peaks.narrowPeak.gz"], "ATCC": ["GSM5718543_LAP-untreated_Smad2.narrowPeak.gz", "GSM5718542_SMAD3_untreated_peaks.narrowPeak.gz", "GSM5718544_LAP-treated_Smad2.narrowPeak.gz", "GSM5718545_SMAD3_treated_peaks.narrowPeak.gz"], "K562": 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"GSM5501215_A653_SLX-20232_K562_50k_bg4_cellNO_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501192_A603_SLX-20231_K562_100k_bg4_bulk_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501216_A654_SLX-20232_K562_50k_bg4_cellNO_rep2_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501218_A656_SLX-20232_K562_10k_bg4_cellNO_rep2_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS": ["GSM4221655_u2os_DNase-seq.hg38_noalt.hotspots.fdr0.05.bed.gz", "GSM5501197_A611_SLX-20231_U2OS_100k_None_bulk_rep2_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM4664298_U2OSdcp1a_hypertonic_r1.genes.bed.gz", "GSM5501202_A633_SLX-20232_U2OS_100k_bg4_bulk_rep3_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", 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"GSM5501222_A672_2_SLX-20522_U2OS_10k_bg4_10X_5th_ref_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501191_A598_SLX-20231_U2OS_100k_None_bulk_rep1_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501195_A609_SLX-20231_U2OS_100k_bg4_bulk_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM3104133_SFPQ_2_U2OS_C6GR9ANXX_GTCCGC_L007_HRR0000007_R1.fastq.noadapt_m20_q2020.hg38_bowtie_v1_m1.filtered.sam.collapsed.PARalyzer_result.bed.all.bed.gz", "GSM4664299_U2OSdcp1a_hypertonic_r2.genes.bed.gz", "GSM3861569_U2OS_r3.txn_units.bed.gz", "GSM4664300_U2OSdcp1a_isotonic_r1.genes.bed.gz", "GSM5501243_SINAF8.cellranger.peak.bed.gz", "GSM5501244_SINAG10.cellranger.peak.bed.gz", "GSM5501203_A634_SLX-20232_U2OS_100k_None_bulk_rep3_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501189_A595_SLX-20231_U2OS_100k_bg4_bulk_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "MFC7": ["GSM5501224_A678_SLX-20524_MCF7_50k_bg4_MCF7_1st_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501227_A683_SLX-20529_MCF7_50k_none_MCF7_1st_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501229_A687_SLX-20533_MCF7_50k_bg4_MCF7_2nd_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501231_A689_SLX-20535_MCF7_10k_bg4_MCF7_2nd_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501225_A679_SLX-20525_MCF7_50k_bg4_MCF7_1st_rep1_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501233_A693_SLX-20539_MCF7_10k_none_MCF7_2nd_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501230_A688_SLX-20534_MCF7_50k_bg4_MCF7_2nd_rep2_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501228_A684_SLX-20530_MCF7_10k_none_MCF7_1st_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501232_A692_SLX-20538_MCF7_50k_none_MCF7_2nd_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501223_A673_2_SLX-20523_MCF7_10k_bg4_10X_5th_ref_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501242_A703_A_SLX-20550_MCF7_10k_bg4_10X_6th_ref_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501226_A680_SLX-20526_MCF7_10k_bg4_MCF7_1st_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "U2OS,MCF7": ["GSM5501245_SINAG1.cellranger.peak.bed.gz"], "induced Pluripotent Stem Cells (iPSC)": ["GSM5429725_BIOCHIP_CPM_POSITIVE_HLCs_rep9.bed.gz", "GSM5429718_BIOCHIP_CPM_POSITIVE_HLCs_rep2.bed.gz", "GSM5429720_BIOCHIP_CPM_POSITIVE_HLCs_rep4.bed.gz", "GSM4513172_BIOCHIP_rep4.bed.gz", "GSM5429713_BIOCHIP_NON_SORTED_HLCs_rep1.bed.gz", "GSM5429724_BIOCHIP_CPM_POSITIVE_HLCs_rep8.bed.gz", "GSM4513166_PETRI_rep1.bed.gz", "GSM5429722_BIOCHIP_CPM_POSITIVE_HLCs_rep6.bed.gz", "GSM5429717_BIOCHIP_CPM_POSITIVE_HLCs_rep1.bed.gz", "GSM5429723_BIOCHIP_CPM_POSITIVE_HLCs_rep7.bed.gz", "GSM4513167_PETRI_rep2.bed.gz", "GSM5429716_BIOCHIP_NON_SORTED_HLCs_rep4.bed.gz", "GSM4513171_BIOCHIP_rep3.bed.gz", "GSM5429715_BIOCHIP_NON_SORTED_HLCs_rep3.bed.gz", "GSM5429721_BIOCHIP_CPM_POSITIVE_HLCs_rep5.bed.gz", "GSM5429714_BIOCHIP_NON_SORTED_HLCs_rep2.bed.gz", "GSM4513168_PETRI_rep3.bed.gz", "GSM4513169_BIOCHIP_rep1.bed.gz", "GSM4513170_BIOCHIP_rep2.bed.gz", "GSM5429719_BIOCHIP_CPM_POSITIVE_HLCs_rep3.bed.gz"], "ChIC_GM12878_CTCF": ["GSM5403559_CTCF_Rep2_peaks.bed.gz", "GSM5403558_CTCF_Rep1_peaks.bed.gz"], "ChIC_GM12878_H3K27ac": ["GSM5403561_H3K27ac_Rep2_peaks.bed.gz", "GSM5403560_H3K27ac_Rep1_peaks.bed.gz"], "ChIC_GM12878_H3K4me3": ["GSM5403563_H3K4me3_Rep2_peaks.bed.gz", "GSM5403562_H3K4me3_Rep1_peaks.bed.gz"], "cell line derived from xenograft tumor": ["GSM5012393_2064692_SKNAS-Vel-01.frag-free_peaks.narrowPeak.gz", "GSM5012395_2064694_SKNAS-IR1-01.frag-free_peaks.narrowPeak.gz", "GSM5012398_2064697_SKNAS-IR2-02.frag-free_peaks.narrowPeak.gz", "GSM5012397_2064696_SKNAS-IR2-01.frag-free_peaks.narrowPeak.gz", "GSM5012396_2064695_SKNAS-IR1-02.frag-free_peaks.narrowPeak.gz", "GSM5012394_2064693_SKNAS-Vel-02.frag-free_peaks.narrowPeak.gz"], "human aortic endothelial cells": ["GSM5694220_Ctrl_K27ac_15kb_SE_peaks.narrowPeak.gz", "GSM5694222_Hypo_peaks.narrowPeak.gz"], "Human monocytes": ["GSM5558271_2_MV130A_PBrandi_ATACSeq_S6.hg38_peaks.narrowPeak.gz", "GSM5558274_5_EtcC_PBrandi_ATACSeq_S9.hg38_peaks.narrowPeak.gz", "GSM5558275_6_MV130C_PBrandi_ATACSeq_S10.hg38_peaks.narrowPeak.gz", "GSM5558273_4_MV130B_PBrandi_ATACSeq_S8.hg38_peaks.narrowPeak.gz", "GSM5558270_1_EtcA_PBrandi_ATACSeq_S5.hg38_peaks.narrowPeak.gz", "GSM5558272_3_EtcB_PBrandi_ATACSeq_S7.hg38_peaks.narrowPeak.gz"], "cranial neural crest cells (CNCC)": ["GSM4909433_CNCC_Rep2_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz", "GSM4909460_CNCC_ATAC_100_bio3.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909432_CNCC_Rep1_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz", "GSM4909438_CNCC_Rep3_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz", "GSM4909430_CNCC_Rep1_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz", "GSM4909437_CNCC_Rep3_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz", "GSM4909436_CNCC_Rep3_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz", "GSM4909458_CNCC_ATAC_100_bio1.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909459_CNCC_ATAC_100_bio2.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909434_CNCC_Rep2_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz", "GSM4909431_CNCC_Rep1_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz", "GSM4909435_CNCC_Rep2_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz"], "human embryonic stem cells (ESC)": ["GSM4909445_ESC_Rep3_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz", "GSM4909439_ESC_Rep1_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz", "GSM4909442_ESC_Rep2_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz", "GSM4909446_ESC_Rep3_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz", "GSM4909440_ESC_Rep1_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz", "GSM4909462_ESC_ATAC_50_bio2.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909443_ESC_Rep2_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz", "GSM4909461_ESC_ATAC_50_bio1.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909463_ESC_ATAC_50_bio4.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909444_ESC_Rep2_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz", "GSM4909447_ESC_Rep3_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz", "GSM4909441_ESC_Rep1_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz"], "neural stem cells (NSC)": ["GSM4909450_NSC_Rep1_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz", "GSM4909464_NSC_ATAC_50_bio2.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909465_NSC_ATAC_50_bio3.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909457_NSC_Rep3b_and_3_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz", "GSM4909453_NSC_Rep2_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz", "GSM4909456_NSC_Rep3_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz", "GSM4909466_NSC_ATAC_50_bio4.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909452_NSC_Rep2_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz", "GSM4909455_NSC_Rep3_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz", "GSM4909449_NSC_Rep1_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz", "GSM4909451_NSC_Rep2_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz", "GSM4909454_NSC_Rep3_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz", "GSM4909448_NSC_Rep1_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz"], "SK-Hep1 cell line": ["GSM3484231_ChIP_H3K27ac_shSMARCB1.bed.gz", "GSM3484229_ChIP_SMARCB1.bed.gz", "GSM3484230_ChIP_H3K27ac_shCon.bed.gz"], "Colorectal cancer cell line": ["GSM5657497_Untreated_H3K27ac_rep1_peaks.bed.gz", "GSM5657506_TNFalpha_24hr_H3K27ac_rep2_peaks.bed.gz", "GSM5657505_TNFalpha_24hr_H3K27ac_rep1_peaks.bed.gz", "GSM5657501_Cobimetinib_24hr_H3K27ac_rep1_peaks.bed.gz", "GSM5657498_Untreated_H3K27ac_rep2_peaks.bed.gz", "GSM5657502_Cobimetinib_24hr_H3K27ac_rep2_peaks.bed.gz"], "VCaP": ["GSM5227761_VCaP_ZBC260_R2_8h.bed.gz", "GSM5227755_VCaP_AU_R2_8h.bed.gz", "GSM5227749_VCaP_DMSO_R2_8h.bed.gz", "GSM5227753_VCaP_AU_R2_4h.bed.gz", "GSM5655510_SI_30281.bed.gz", "GSM5655508_SI_30279.bed.gz", "GSM5227754_VCaP_AU_R1_8h.bed.gz", "GSM5655507_SI_30278.bed.gz", "GSM5227763_VCaP_ZBC260_R2_24h.bed.gz", "GSM5227748_VCaP_DMSO_R1_8h.bed.gz", "GSM5227762_VCaP_ZBC260_R1_24h.bed.gz", "GSM5227760_VCaP_ZBC260_R1_8h.bed.gz", "GSM5227757_VCaP_AU_R2_12h.bed.gz", "GSM5655509_SI_30280.bed.gz", "GSM5227752_VCaP_AU_R1_4h.bed.gz", "GSM5227759_VCaP_AU_R2_24h.bed.gz", "GSM5227751_VCaP_DMSO_R2_24h.bed.gz", "GSM5227750_VCaP_DMSO_R1_24h.bed.gz", "GSM5227756_VCaP_AU_R1_12h.bed.gz", "GSM5227758_VCaP_AU_R1_24h.bed.gz"], "LNCaP": ["GSM5227770_LNCaP_sgNC+shNC_R1_72h.bed.gz", "GSM5227765_LNCaP_DMSO_R2_24h.bed.gz", "GSM5227777_LNCaP_sgSMARCA2+shSMARCA4_R2_72h.bed.gz", "GSM5227768_LNCaP_AU_R1_24h.bed.gz", "GSM5227772_LNCaP_sgSMARCA2_R1_72h.bed.gz", "GSM5227764_LNCaP_DMSO_R1_24h.bed.gz", "GSM5227774_LNCaP_sgSMARCA4_R1_72h.bed.gz", "GSM5227771_LNCaP_sgNC+shNC_R2_72h.bed.gz", "GSM5227775_LNCaP_sgSMARCA4_R2_72h.bed.gz", "GSM5227769_LNCaP_AU_R2_24h.bed.gz", "GSM5227773_LNCaP_sgSMARCA2_R2_72h.bed.gz", "GSM5227767_LNCaP_AU_R2_12h.bed.gz", "GSM5227766_LNCaP_AU_R1_12h.bed.gz", "GSM5227776_LNCaP_sgSMARCA2+shSMARCA4_R1_72h.bed.gz"], "donor information:": ["GSM5625732_WTC11-3_rep3.count.bed.gz", "GSM5625727_WTC11-1_rep1.count.bed.gz", "GSM5625731_WTC11-3_rep2.count.bed.gz", "GSM5625730_WTC11-3_rep1.count.bed.gz", "GSM5625728_WTC11-1_rep2.count.bed.gz", "GSM5625729_WTC11-1_rep3.count.bed.gz"], "HEK-293T cells": ["GSM5623227_total_peak.bed.gz", "GSM5623224_IP2_peak.bed.gz", "GSM5623229_mRNA1_peak.bed.gz", "GSM5623223_IP1_peak.bed.gz"], "Skin squamous cell carcinoma": ["GSM5345077_Input1-IP1.bed.gz", "GSM5345078_Input2-IP2.bed.gz"], "Undifferentiated hESCs": ["GSM5593831_015VSheffield_Brachyury_ucsctracks_NEG_score.bed.gz"], "NMP-like axial progenitors": ["GSM5593832_015VSheffield_Brachyury_ucsctracks_POs_score.bed.gz"], "parent": ["GSM5133441_45_Chip_K4me3.bed.gz", "GSM5133444_Hu1545_H3K27me3.bed.gz", "GSM5133443_45_Chip_K27Ac.bed.gz", "GSM5133455_7_5_Chip_K27Ac.bed.gz", "GSM5133454_7_5_Chip_K4me1.bed.gz", "GSM5133442_45_Chip_K4me1.bed.gz", "GSM5133457_Huh75-ATAC.bed.gz", "GSM5133453_7_5_Chip_K4me3.bed.gz", "GSM5133456_Huh75_H3K27me3.bed.gz", "GSM5133445_Hu1545-ATAC.bed.gz"], "HCV": ["GSM5133451_Hu1545_HCV-ATAC.bed.gz", "GSM5133459_7_5_HCV_K4me3.bed.gz", "GSM5133448_45_HCV_K4me1.bed.gz", "GSM5133449_45_HCV_K27Ac.bed.gz", "GSM5133450_Hu1545_HCV_H3K27me3.bed.gz", "GSM5133460_7_5_HCV_K4me1.bed.gz", "GSM5133461_7_5_HCV_K27Ac.bed.gz", "GSM5133447_45_HCV_K4me3.bed.gz", "GSM5133463_Huh75_HCV-ATAC.bed.gz", "GSM5133462_Huh75_HCV_H3K27me3.bed.gz"], "derived from castration sensitive and androgen sensitive LNCaP cells": ["GSM5575321_V16D-Rep1-H3K27me3_peaks.broadPeak.gz", "GSM5575330_V16D-H19-Rep1-H3K27me3_peaks.broadPeak.gz", "GSM5575331_V16D-H19-Rep2-H3K27me3_peaks.broadPeak.gz", "GSM5575327_V16D-H19-Rep1-H3K4me3_peaks.narrowPeak.gz", "GSM5575332_V16D-H19-Rep3-H3K27me3_peaks.broadPeak.gz", "GSM5575320_V16D-Rep3-H3K4me3_peaks.narrowPeak.gz", "GSM5575319_V16D-Rep2-H3K4me3_peaks.narrowPeak.gz", "GSM5575329_V16D-H19-Rep3-H3K4me3_peaks.narrowPeak.gz", "GSM5575328_V16D-H19-Rep2-H3K4me3_peaks.narrowPeak.gz", "GSM5575323_V16D-Rep3-H3K27me3_peaks.broadPeak.gz", "GSM5575322_V16D-Rep2-H3K27me3_peaks.broadPeak.gz", "GSM5575318_V16D-Rep1-H3K4me3_peaks.narrowPeak.gz"], "Colon epithelial": ["GSM4831434_CNOT7_8_KO_1_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831443_PUM2_KO_1_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831444_PUM2_KO_2_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831429_Ctrl_2_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831433_CNOT1_KO_3_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831435_CNOT7_8_KO_2_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831428_Ctrl_1_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831430_Ctrl_3_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831437_PUM1_2_KO_1_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831436_CNOT7_8_KO_3_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831431_CNOT1_KO_1_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831440_PUM1_KO_1_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831438_PUM1_2_KO_2_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831432_CNOT1_KO_2_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831441_PUM1_KO_2_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831439_PUM1_2_KO_3_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831445_PUM2_KO_3_Hisat2-mapping_3prime-ends.bed.gz", "GSM4831442_PUM1_KO_3_Hisat2-mapping_3prime-ends.bed.gz"], "LNCaP cells": ["GSM5155454_LNCaP-RESB_peaks.bed.gz", "GSM5155451_LNCaP-DMSO_peaks.bed.gz", "GSM5155453_LNCaP-RESA_peaks.bed.gz", "GSM5155452_LNCaP-ENZ48_peaks.bed.gz"], "H2107 cells treated with Dox +/- SCH": ["GSM4869015_H2107_KRAS_Dox_SCH-N3.hg38_peaks.narrowPeak.gz", "GSM4869011_H2107_KRAS_Dox_nodrug-N2.hg38_peaks.narrowPeak.gz", "GSM4869018_H2107_KRAS_nodox_nodrug-N3.hg38_peaks.narrowPeak.gz", "GSM4869016_H2107_KRAS_nodox_nodrug-N1.hg38_peaks.narrowPeak.gz", "GSM4869013_H2107_KRAS_Dox_SCH-N1.hg38_peaks.narrowPeak.gz", "GSM4869017_H2107_KRAS_nodox_nodrug-N2.hg38_peaks.narrowPeak.gz", "GSM4869010_H2107_KRAS_Dox_nodrug-N1.hg38_peaks.narrowPeak.gz", "GSM4869014_H2107_KRAS_Dox_SCH-N2.hg38_peaks.narrowPeak.gz", "GSM4869012_H2107_KRAS_Dox_nodrug-N3.hg38_peaks.narrowPeak.gz"], "H524 cells treated with Dox +/- SCH": ["GSM4869023_H524_KRAS_Dox_SCH-N2.hg38_peaks.narrowPeak.gz", "GSM4869021_H524_KRAS_Dox_nodrug-N3.hg38_peaks.narrowPeak.gz", "GSM4869027_H524_KRAS_nodox_nodrug-N3.hg38_peaks.narrowPeak.gz", "GSM4869019_H524_KRAS_Dox_nodrug-N1.hg38_peaks.narrowPeak.gz", "GSM4869022_H524_KRAS_Dox_SCH-N1.hg38_peaks.narrowPeak.gz", "GSM4869020_H524_KRAS_Dox_nodrug-N2.hg38_peaks.narrowPeak.gz", "GSM4869025_H524_KRAS_nodox_nodrug-N1.hg38_peaks.narrowPeak.gz", "GSM4869026_H524_KRAS_nodox_nodrug-N2.hg38_peaks.narrowPeak.gz", "GSM4869024_H524_KRAS_Dox_SCH-N3.hg38_peaks.narrowPeak.gz"], "H82 cells treated with Dox +/- SCH, SB, A485, SB+A485": ["GSM4869042_H82_KRAS_Dox_SCH-1uM-N3.hg38_peaks.narrowPeak.gz", "GSM4869036_H82_KRAS_Dox_SB-5uM-N3.hg38_peaks.narrowPeak.gz", "GSM4869030_H82_KRAS_Dox_A485-400uM-N3.hg38_peaks.narrowPeak.gz", "GSM4869031_H82_KRAS_Dox_nodrug-N1.hg38_peaks.narrowPeak.gz", "GSM4869044_H82_KRAS_nodox_nodrug-N2.hg38_peaks.narrowPeak.gz", "GSM4869029_H82_KRAS_Dox_A485-400uM-N2.hg38_peaks.narrowPeak.gz", "GSM4869037_H82_KRAS_Dox_SB-A485-N1.hg38_peaks.narrowPeak.gz", "GSM4869038_H82_KRAS_Dox_SB-A485-N2.hg38_peaks.narrowPeak.gz", "GSM4869035_H82_KRAS_Dox_SB-5uM-N2.hg38_peaks.narrowPeak.gz", "GSM4869040_H82_KRAS_Dox_SCH-1uM-N1.hg38_peaks.narrowPeak.gz", "GSM4869033_H82_KRAS_Dox_nodrug-N3.hg38_peaks.narrowPeak.gz", "GSM4869032_H82_KRAS_Dox_nodrug-N2.hg38_peaks.narrowPeak.gz", "GSM4869043_H82_KRAS_nodox_nodrug-N1.hg38_peaks.narrowPeak.gz", "GSM4869045_H82_KRAS_nodox_nodrug-N3.hg38_peaks.narrowPeak.gz", "GSM4869028_H82_KRAS_Dox_A485-400uM-N1.hg38_peaks.narrowPeak.gz", "GSM4869041_H82_KRAS_Dox_SCH-1uM-N2.hg38_peaks.narrowPeak.gz", "GSM4869034_H82_KRAS_Dox_SB-5uM-N1.hg38_peaks.narrowPeak.gz", "GSM4869039_H82_KRAS_Dox_SB-A485-N3.hg38_peaks.narrowPeak.gz"], "Cord blood": ["GSM4658372_LT_HSC_TFEB_OE_3.narrowPeak.gz", "GSM4658367_LT_HSC_GP91_1.narrowPeak.gz", "GSM4658369_LT_HSC_GP91_3.narrowPeak.gz", "GSM4658368_LT_HSC_GP91_2.narrowPeak.gz", "GSM4658371_LT_HSC_TFEB_OE_2.narrowPeak.gz", "GSM4658370_LT_HSC_TFEB_OE_1.narrowPeak.gz"], "MCF7(FGFR1)(SP-)(NLS) cells": ["GSM4515959_macs2_MCF7_NLS_Rep3_peaks_peaks.narrowPeak.bed.gz", "GSM4515958_macs2_MCF7_NLS_Rep2_peaks_peaks.narrowPeak.bed.gz", "GSM4515957_macs2_MCF7_NLS_Rep1_peaks_peaks.narrowPeak.bed.gz"], "CAMA1 cells": ["GSM4460127_macs2_ctrl-H3K27ac-rep1_peaks_peaks.narrowPeak.gz", "GSM4460125_macs2_ctrl_FGFR-rep2_peaks_peaks.narrowPeak.gz", "GSM4460142_macs2_siFOXA1_FGFR-rep1_peaks_peaks.narrowPeak.gz", "GSM4460139_macs2_siNC_FGFR-rep1_peaks_peaks.narrowPeak.gz", "GSM4460130_macs2_ctrl_H3K4ME3-rep1_peaks_peaks.narrowPeak.gz", "GSM4460137_macs2_ctrl-FOXA2-rep2_peaks_peaks.narrowPeak.gz", "GSM4460128_macs2_ctrl-H3K27ac-rep2_peaks_peaks.narrowPeak.gz", "GSM4460143_macs2_siFOXA1_FGFR-rep2_peaks_peaks.narrowPeak.gz", "GSM4460134_macs2_ctrl_RNAPOLII-rep2_peaks_peaks.narrowPeak.gz", "GSM4460136_macs2_ctrl-FOXA2-rep1_peaks_peaks.narrowPeak.gz", "GSM4460124_macs2_ctrl_FGFR-rep1_peaks_peaks.narrowPeak.gz", "GSM4460140_macs2_siNC_FGFR-rep2_peaks_peaks.narrowPeak.gz", "GSM4460133_macs2_ctrl_RNAPOLII-rep1_peaks_peaks.narrowPeak.gz", "GSM4460131_macs2_ctrl_H3K4ME3-rep2_peaks_peaks.narrowPeak.gz"], "iPSC-derived Astrocytes": ["GSM5433768_Atrocyte_TCF7L2_peaks.bed.gz"], "CD34+ cells": ["GSM4859818_T21_G_GATA.MACS2.peaks.bed.gz", "GSM4859816_T21_Ctrl_GATA.MACS2.peaks.bed.gz", "GSM4859817_N_G_GATA.MACS2.peaks.bed.gz", "GSM4859815_N_Ctrl_GATA.MACS2.peaks.bed.gz"], "hPSC": ["GSM5121219_KLF4_naive_rep2.narrowPeak.gz", "GSM5121220_KLF4_primed.narrowPeak.gz", "GSM5121147_Naive_BRG1_WT.narrowPeak.gz", "GSM5121157_Primed_BRG1_HET.narrowPeak.gz", "GSM5121218_KLF4_naive_rep1.narrowPeak.gz", "GSM5121148_Naive_BRG1_HET.narrowPeak.gz", "GSM5121150_Naive_BRG1_KO_rep2.narrowPeak.gz", "GSM5121153_Re-Priming_BRG1_KO_rep1.narrowPeak.gz", "GSM5121155_Re-Priming_BRG1_KO_rep3.narrowPeak.gz", "GSM5121151_Re-Priming_BRG1_WT.narrowPeak.gz", "GSM5121149_Naive_BRG1_KO_rep1.narrowPeak.gz", "GSM5121154_Re-Priming_BRG1_KO_rep2.narrowPeak.gz", "GSM5121156_Primed_BRG1_WT.narrowPeak.gz", "GSM5121152_Re-Priming_BRG1_HET.narrowPeak.gz"], "HT1080 cell line": ["GSM4656276_FUS-DDIT3-E_CTCF_narrow_Peaks.bed.gz", "GSM4656267_DDIT3-T-DDIT3_narrow_Peaks.bed.gz", "GSM4656270_EWS-FLI1-G_CTCF_narrow_Peaks.bed.gz", "GSM4656275_EWS-FLI1-HI-H3k27me3_broad_Peaks.bed.gz", "GSM4656286_WT-B-DDIT3_narrow_Peaks.bed.gz", "GSM4656280_FUS-DDIT3-E_DDIT3_narrow_Peaks.bed.gz", "GSM4656262_DDIT3-N_CTCF_narrow_Peaks.bed.gz", "GSM4656268_DDIT3-T-H3K27ac_broad_Peaks.bed.gz", "GSM4656269_DDIT3-T-H3K27me3_broad_Peaks.bed.gz", "GSM4656287_WT-C_DDIT3_narrow_Peaks.bed.gz", "GSM4656263_DDIT3-N_DDIT3_narrow_Peaks.bed.gz", "GSM4656278_FUS-DDIT3-D_H3K27ac_broad_Peaks.bed.gz", "GSM4656283_FUS-DDIT3-S-DDIT3_narrow_Peaks.bed.gz", "GSM4656277_FUS-DDIT3-S-CTCF_narrow_Peaks.bed.gz", "GSM4656289_WT-X-CTCF_narrow_Peaks.bed.gz", "GSM4656281_FUS-DDIT3-R-H3K27ac_broad_Peaks.bed.gz", "GSM4656272_EWS-FLI1-G_H3K27me3_broad_Peaks.bed.gz", "GSM4656282_FUS-DDIT3-R-H3K27me3_broad_Peaks.bed.gz", "GSM4656291_WT-X-H3K27me3_broad_Peaks.bed.gz", "GSM4656274_EWS-FLI1-HI-H3K27ac_broad_Peaks.bed.gz", "GSM4656279_FUS-DDIT3-D_H3K27me3_broad_Peaks.bed.gz", "GSM4656290_WT-X-H3K27ac_broad_Peaks.bed.gz", "GSM4656271_EWS-FLI1-G_H3K27ac_broad_Peaks.bed.gz", "GSM4656284_WT-A_CTCF_narrow_Peaks.bed.gz", "GSM4656273_EWS-FLI1-HI-CTCF_narrow_Peaks.bed.gz", "GSM4656265_DDIT3-O_H3K27me3_broad_Peaks.bed.gz", "GSM4656285_WT-A_H3K27me3_broad_Peaks.bed.gz", "GSM4656288_WT-C_H3K27ac_broad_Peaks.bed.gz", "GSM4656264_DDIT3-Z-H3K27ac_broad_Peaks.bed.gz", "GSM4656266_DDIT3-T-CTCF_narrow_Peaks.bed.gz"], "Embryonic stem cells": ["GSM5085770_XH124.bed.gz", "GSM5085769_XH123.bed.gz", "GSM4443751_ZM156.bed.gz", "GSM4443748_ZM124.bed.gz", "GSM4443750_ZM126.bed.gz", "GSM5085768_XH128.bed.gz", "GSM4443744_XH91.bed.gz", "GSM4443747_ZM123.bed.gz", "GSM4443749_ZM125.bed.gz", "GSM4443742_XH88.bed.gz"], "castration resistant prostate cancer": ["GSM5387840_LNCAP_sgKIF4A_1_narrow_peaks.bed.gz", "GSM5387843_LNCAP_sgNC_2_narrow_peaks.bed.gz", "GSM5387842_LNCAP_sgNC_1_narrow_peaks.bed.gz", "GSM5387839_C42B_sgNC_2_narrow_peaks.bed.gz", "GSM5387841_LNCAP_sgKIF4A_2_narrow_peaks.bed.gz", "GSM5387836_C42B_sgKIF4A_1_narrow_peaks.bed.gz", "GSM5387838_C42B_sgNC_1_narrow_peaks.bed.gz", "GSM5387837_C42B_sgKIF4A_2_narrow_peaks.bed.gz"], "hPSCs": ["GSM4495605_1-4_JARID2_S16_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz", "GSM4495606_3-4_JARID2_S22_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz"], "hiPSCs": ["GSM4497745_2-3_H3K27me3_S18_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_broad_peaks.broadPeak.gz", "GSM4497747_1-3_H3K27me3_S15_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_broad_peaks.broadPeak.gz", "GSM4497746_2-2_EED_S17_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz", "GSM4497744_3-2_EED_S20_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz", "GSM4497743_1-2_EED_S14_vsInput_MDRD_MQ40filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz", "GSM4497748_3-3_H3K27me3_S21_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_broad_peaks.broadPeak.gz"], "hESCs": ["GSM4498399_1-2_EED_S41_vsInput_S48_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz", "GSM4498400_3-2_EED_S43_vsInput_S48_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz"], "ovarian carcinoma": ["GSM5261787_A2780_cont_final.narrowPeak.gz", "GSM5261790_A2780cis_cisplatin_final.narrowPeak.gz", "GSM5261789_A2780_cisplatin_final.narrowPeak.gz", "GSM5261788_A2780cis_cont_final.narrowPeak.gz"], "Patient Derived Cancer Cells": ["GSM4872080_ctrl_PB.narrowPeak.gz", "GSM4872079_ctrl_B.narrowPeak.gz", "GSM4872083_treat_B_peaks.narrowPeak.gz", "GSM4872089_treat_h3k27ac.narrowPeak.gz", "GSM4872081_ctrl_PS.narrowPeak.gz", "GSM4872085_treat_PS.narrowPeak.gz", "GSM4872087_ctrl_h3k27ac.narrowPeak.gz", "GSM4872084_treat_PB.narrowPeak.gz"], "Prostate Cancer": ["GSM5775768_LnCaP_unt_peaks.narrowPeak.gz", "GSM5775769_LnCaP_res_peaks.narrowPeak.gz", "GSM5775770_LnCaP_sen_peaks.narrowPeak.gz", "GSM4959453_moffitt_Untrt_peaks.narrowPeak.gz", "GSM4959454_moffitt_R9bMS_peaks.narrowPeak.gz"], "HCT116": ["GSM4878565_HCT116_bruseq_rep3.genes.bed.gz", "GSM4878563_HCT116_bruseq_rep1.genes.bed.gz", "GSM3733773_AllenGROnucdmso_peaks_clean.broadPeak.gz", "GSM3733774_AllenGROnucnutlin_peaks_clean.broadPeak.gz", "GSM4878564_HCT116_bruseq_rep2.genes.bed.gz", "GSM3682896_WT2_bc5.C2T.m6A.kmer.onlyDRACH.appended.bed.gz", "GSM3682897_METTL5KO1_bc7.C2T.m6A.kmer.onlyDRACH.appended.bed.gz", "GSM4878596_HCT116_bruChaseseq_rep1.genes.bed.gz", "GSM4878567_HCT116_bruseq_rep5.genes.bed.gz", "GSM3682895_WT1_bc2.C2T.m6A.kmer.onlyDRACH.appended.bed.gz", "GSM3682898_METTL5KO2_bc8.C2T.m6A.kmer.onlyDRACH.appended.bed.gz", "GSM3861524_HCT116_r2.txn_units.bed.gz", "GSM3861525_HCT116_r3.txn_units.bed.gz", "GSM3682900_ZCCHC4KO2_bc9.C2T.m6A.kmer.onlyDRACH.appended.bed.gz", "GSM3682899_ZCCHC4KO1_bc4.C2T.m6A.kmer.onlyDRACH.appended.bed.gz", "GSM4878566_HCT116_bruseq_rep4.genes.bed.gz", "GSM3861526_HCT116_r4.txn_units.bed.gz", "GSM3861523_HCT116_r1.txn_units.bed.gz"], "HF1": ["GSM4878576_HF1_bruseq_rep2.genes.bed.gz", "GSM4878578_HF1_bruseq_rep4.genes.bed.gz", "GSM4878575_HF1_bruseq_rep1.genes.bed.gz", "GSM4878602_HF1_bruChaseseq_rep3.genes.bed.gz", "GSM4878600_HF1_bruChaseseq_rep1.genes.bed.gz", "GSM4878577_HF1_bruseq_rep3.genes.bed.gz", "GSM4878601_HF1_bruChaseseq_rep2.genes.bed.gz"], "MiaPaCa": ["GSM3861553_MiaPaCa_r2.txn_units.bed.gz", "GSM4878584_MiaPaCa_bruseq_rep1.genes.bed.gz", "GSM4878585_MiaPaCa_bruseq_rep2.genes.bed.gz", "GSM3861555_MiaPaCa_r4.txn_units.bed.gz", "GSM3861556_MiaPaCa_r5.txn_units.bed.gz", "GSM4878587_MiaPaCa_bruseq_rep4.genes.bed.gz", "GSM3861552_MiaPaCa_r1.txn_units.bed.gz", "GSM3861557_MiaPaCa_r6.txn_units.bed.gz", "GSM4878586_MiaPaCa_bruseq_rep3.genes.bed.gz", "GSM4878591_MiaPaCa_bruseq_rep8.genes.bed.gz", "GSM4878590_MiaPaCa_bruseq_rep7.genes.bed.gz", "GSM4878589_MiaPaCa_bruseq_rep6.genes.bed.gz", "GSM3861554_MiaPaCa_r3.txn_units.bed.gz", "GSM4878588_MiaPaCa_bruseq_rep5.genes.bed.gz", "GSM4878607_MiaPaCa_bruChaseseq_rep1.genes.bed.gz"], "Panc1": ["GSM4878608_Panc1_bruChaseseq_rep1.genes.bed.gz", "GSM4878609_Panc1_bruChaseseq_rep2.genes.bed.gz", "GSM4878593_Panc1_bruseq_rep2.genes.bed.gz", "GSM4878594_Panc1_bruseq_rep3.genes.bed.gz", "GSM4878595_Panc1_bruseq_rep4.genes.bed.gz", "GSM4878592_Panc1_bruseq_rep1.genes.bed.gz"], "male FSHD iPSC": ["GSM4494724_MACS_15491X12_FSHDp53KO_controlB_peaks.narrowPeak.gz", "GSM4494721_MACS_15491X01_FSHD_doxo_A_peaks.narrowPeak.gz", "GSM4494723_MACS_15491X11_FSHDp53KO_controlA_peaks.narrowPeak.gz", "GSM4494726_MACS_15491X10_FSHDp53KO_doxoRB_peaks.narrowPeak.gz", "GSM4494725_MACS_15491X09_FSHDp53KO_doxoRA_peaks.narrowPeak.gz", "GSM4494719_MACS_15491X03_FSHD_controlA_peaks.narrowPeak.gz", "GSM4494722_MACS_15491X02_FSHD_doxo_A_peaks.narrowPeak.gz", "GSM4494720_MACS_15491X04_FSHD_controlB_peaks.narrowPeak.gz"], "DND41": ["GSM5024536_DND41_H3K27ac_peaks.narrowPeak.gz", "GSM5024537_DND41_BCL11B_peaks.narrowPeak.gz"], "primary TALL": ["GSM5265326_BCL11B_E14259_peaks.narrowPeak.gz", "GSM5265325_BCL11B_E22952_peaks.narrowPeak.gz", "GSM5265324_BCL11B_E15804_peaks.narrowPeak.gz", "GSM5024540_SJTALL005006_BCL11B_rep1_peaks.narrowPeak.gz", "GSM5024541_SJTALL005006_BCL11B_rep2_peaks.narrowPeak.gz", "GSM5024539_SJTALL005006_H3K27ac_peaks.narrowPeak.gz"], "Colon cancer": ["GSM4733459_RKO_ATAC_DMSO_Rep3_Avg_val.bed.gz", "GSM4733458_RKO_ATAC_DMSO_Rep2_Avg_val.bed.gz", "GSM4733462_RKO_ATAC_APH_Rep3_Avg_val.bed.gz", "GSM4733460_RKO_ATAC_APH_Rep1_Avg_val.bed.gz", "GSM4733457_RKO_ATAC_DMSO_Rep1_Avg_val.bed.gz", "GSM4733461_RKO_ATAC_APH_Rep2_Avg_val.bed.gz"], "K562 cells": ["GSM4411225_DS76917_ZMW_IDs_hg38.bed.gz", "GSM4676157_siBRG1_DRIPc-seq_W_strand_peaks_rep2.bed.gz", "GSM4798204_k562_cnr_wbp11_copy1.narrowPeak.gz", "GSM4411215_DS70818_peaks_fdr05.bed.gz", "GSM4798205_k562_cnr_wbp11_copy2.narrowPeak.gz", "GSM4798203_k562_cnr_erh_copy2.narrowPeak.gz", "GSM4798202_k562_cnr_erh_copy1.narrowPeak.gz", "GSM4676155_siC_DRIPc-seq_C_strand_peaks_rep1.bed.gz", "GSM4676156_siBRG1_DRIPc-seq_C_strand_peaks_rep1.bed.gz", "GSM4411216_DS70819_peaks_fdr05.bed.gz", "GSM4676156_siBRG1_DRIPc-seq_W_strand_peaks_rep1.bed.gz", "GSM4676157_siBRG1_DRIPc-seq_C_strand_peaks_rep2.bed.gz", "GSM4676155_siC_DRIPc-seq_W_strand_peaks_rep1.bed.gz"], "myeloid dendritic cells": ["GSM5107570_ChIP_09_vs_ChIP_12_broad_peaks.broadPeak.gz", "GSM5107572_ChIP_11_vs_ChIP_12_broad_peaks.broadPeak.gz", "GSM5107571_ChIP_10_vs_ChIP_12_broad_peaks.broadPeak.gz", "GSM5107564_ChIP_03_vs_ChIP_04_broad_peaks.broadPeak.gz", "GSM5107587_ChIP_26_vs_ChIP_28_broad_peaks.broadPeak.gz", "GSM5107580_ChIP_19_vs_ChIP_20_broad_peaks.broadPeak.gz", "GSM5107592_ChIP_31_vs_ChIP_32_broad_peaks.broadPeak.gz", "GSM5107566_ChIP_05_vs_ChIP_08_broad_peaks.broadPeak.gz", "GSM5107567_ChIP_06_vs_ChIP_08_broad_peaks.broadPeak.gz", "GSM5107591_ChIP_30_vs_ChIP_32_broad_peaks.broadPeak.gz", "GSM5107576_ChIP_15_vs_ChIP_16_broad_peaks.broadPeak.gz", "GSM5107584_ChIP_23_vs_ChIP_24_broad_peaks.broadPeak.gz", "GSM5107574_ChIP_13_vs_ChIP_16_broad_peaks.broadPeak.gz", "GSM5107563_ChIP_02_vs_ChIP_04_broad_peaks.broadPeak.gz", "GSM5107575_ChIP_14_vs_ChIP_16_broad_peaks.broadPeak.gz", "GSM5107568_ChIP_07_vs_ChIP_08_broad_peaks.broadPeak.gz", "GSM5107586_ChIP_25_vs_ChIP_28_broad_peaks.broadPeak.gz", "GSM5107578_ChIP_17_vs_ChIP_20_broad_peaks.broadPeak.gz", "GSM5107583_ChIP_22_vs_ChIP_24_broad_peaks.broadPeak.gz", "GSM5107579_ChIP_18_vs_ChIP_20_broad_peaks.broadPeak.gz", "GSM5107590_ChIP_29_vs_ChIP_32_broad_peaks.broadPeak.gz", "GSM5107582_ChIP_21_vs_ChIP_24_broad_peaks.broadPeak.gz", "GSM5107562_ChIP_01_vs_ChIP_04_broad_peaks.broadPeak.gz", "GSM5107588_ChIP_27_vs_ChIP_28_broad_peaks.broadPeak.gz"], "Chronic myelogenous leukemia (CML)": ["GSM5273605_TRIP_mapping_P2_2.bed.gz", "GSM5273603_TRIP_mapping_P1_2.bed.gz", "GSM5273602_TRIP_mapping_P1_1.bed.gz", "GSM5273606_TRIP_mapping_P3_1.bed.gz", "GSM5273609_TRIP_mapping_P4_2.bed.gz", "GSM5273607_TRIP_mapping_P3_2.bed.gz", "GSM5273608_TRIP_mapping_P4_1.bed.gz", "GSM5273604_TRIP_mapping_P2_1.bed.gz"], "NALM-6": ["GSM5259752_NALM6_AIOLOS-G159R_4_peaks.narrowPeak.gz", "GSM5259751_NALM6_AIOLOS-G159R_3_peaks.narrowPeak.gz", "GSM5259747_NALM6_AIOLOS-WT_3_peaks.narrowPeak.gz", "GSM5259748_NALM6_AIOLOS-WT_4_peaks.narrowPeak.gz", "GSM5259745_NALM6_AIOLOS-WT_1_peaks.narrowPeak.gz", "GSM5259749_NALM6_AIOLOS-G159R_1_peaks.narrowPeak.gz", "GSM5259746_NALM6_AIOLOS-WT_2_peaks.narrowPeak.gz", "GSM5259750_NALM6_AIOLOS-G159R_2_peaks.narrowPeak.gz"], "HEK293T cells": ["GSM4503590_MM381_HEK293T_XL_H3_3_EMDMillipore_peaks.narrowPeak.gz", "GSM4503589_MM380_HEK293T_XL_H2AZ_ABCAM_peaks.narrowPeak.gz", "GSM4503592_MM384_HEK293T_XL_H3K79me2_CST_peaks.narrowPeak.gz", "GSM4503591_MM383_HEK293T_XL_H4K16ac_CST_peaks.narrowPeak.gz", "GSM4503588_MM379_HEK293T_XL_H2AZ_CST_peaks.narrowPeak.gz"], "T acute lymphoblastic blasts": ["GSM4572159_427_BT3_H3K4me3_peaks.bed.gz", "GSM4572160_790_BT15_H3K4me3_peaks.bed.gz", "GSM4572161_764_BT16_H3K4me3_peaks.bed.gz"], "T acute lymphoblastic cell line": ["GSM4572162_ALL-SIL_H3K4me3_peaks.bed.gz", "GSM4572164_Loucy_H3K4me3_Spike_peaks.bed.gz", "GSM4572165_RPMI_H3K4me3_peaks.bed.gz", "GSM4572166_CCRF-CEM_H3K4me3_peaks.bed.gz", "GSM4572163_Jurkat_H3K4me3_Spike_peaks.bed.gz"], "breast epilthelial cells": ["GSM4614794_LIB180727LH_04_PBS_0_S59_L008.narrowPeak.gz", "GSM4614836_LIB180727LH_02_EGF_48_S28_L004.narrowPeak.gz", "GSM4614815_LIB180727LH_03_TGFb_24_S36_L005.narrowPeak.gz", "GSM4614817_LIB180727LH_02_TGFb_48_S43_L006.narrowPeak.gz", "GSM4614837_LIB180727LH_03_EGF_48_S49_L006.narrowPeak.gz", "GSM4614825_LIB180727LH_04_HGF_48_S56_L007.narrowPeak.gz", "GSM4614803_LIB180727LH_03_BMP2_24_S52_L007.narrowPeak.gz", "GSM4614816_LIB180727LH_04_TGFb_24_S31_L005.narrowPeak.gz", "GSM4614811_LIB180727LH_02_IFNg_48_S37_L005.narrowPeak.gz", "GSM4614822_LIB180727LH_04_HGF_24_S62_L008.narrowPeak.gz", "GSM4614828_LIB180727LH_04_OSM_24_S40_L005.narrowPeak.gz", "GSM4614806_LIB180727LH_03_BMP2_48_S33_L005.narrowPeak.gz", "GSM4614797_LIB180727LH_03_PBS_24_S29_L004.narrowPeak.gz", "GSM4614834_LIB180727LH_04_EGF_24_S21_L004.narrowPeak.gz", "GSM4614830_LIB180727LH_03_OSM_48_S46_L006.narrowPeak.gz", "GSM4614800_LIB180727LH_03_PBS_48_S25_L004.narrowPeak.gz", "GSM4614813_LIB180727LH_04_IFNg_48_S66_L008.narrowPeak.gz", "GSM4614808_LIB180727LH_02_IFNg_24_S57_L007.narrowPeak.gz", "GSM4614804_LIB180727LH_04_BMP2_24_S64_L008.narrowPeak.gz", "GSM4614801_LIB180727LH_04_PBS_48_S53_L007.narrowPeak.gz", "GSM4614807_LIB180727LH_04_BMP2_48_S67_L008.narrowPeak.gz", "GSM4614829_LIB180727LH_02_OSM_48_S63_L008.narrowPeak.gz", "GSM4614809_LIB180727LH_03_IFNg_24_S32_L005.narrowPeak.gz", "GSM4614796_LIB180727LH_02_PBS_24_S34_L005.narrowPeak.gz", "GSM4614823_LIB180727LH_02_HGF_48_S44_L006.narrowPeak.gz", "GSM4614835_LIB180727LH_01_EGF_24_S38_L005.narrowPeak.gz", "GSM4614805_LIB180727LH_02_BMP2_48_S47_L006.narrowPeak.gz", "GSM4614814_LIB180727LH_02_TGFb_24_S48_L006.narrowPeak.gz", "GSM4614810_LIB180727LH_04_IFNg_24_S45_L006.narrowPeak.gz", "GSM4614821_LIB180727LH_03_HGF_24_S39_L005.narrowPeak.gz", "GSM4614838_LIB180727LH_04_EGF_48_S61_L008.narrowPeak.gz", "GSM4614831_LIB180727LH_04_OSM_48_S27_L004.narrowPeak.gz", "GSM4614792_LIB180727LH_02_PBS_0_S41_L006.narrowPeak.gz", "GSM4614802_LIB180727LH_02_BMP2_24_S42_L006.narrowPeak.gz", "GSM4614824_LIB180727LH_03_HGF_48_S30_L004.narrowPeak.gz", "GSM4614795_LIB180727LH_01_PBS_0_S26_L004.narrowPeak.gz", "GSM4614826_LIB180727LH_02_OSM_24_S22_L004.narrowPeak.gz", "GSM4614820_LIB180727LH_02_HGF_24_S24_L004.narrowPeak.gz", "GSM4614839_LIB180727LH_01_EGF_48_S55_L007.narrowPeak.gz", "GSM4614833_LIB180727LH_03_EGF_24_S35_L005.narrowPeak.gz", "GSM4614812_LIB180727LH_03_IFNg_48_S23_L004.narrowPeak.gz", "GSM4614798_LIB180727LH_04_PBS_24_S65_L008.narrowPeak.gz", "GSM4614832_LIB180727LH_02_EGF_24_S58_L007.narrowPeak.gz", "GSM4614818_LIB180727LH_03_TGFb_48_S60_L007.narrowPeak.gz", "GSM4614827_LIB180727LH_03_OSM_24_S51_L007.narrowPeak.gz", "GSM4614793_LIB180727LH_03_PBS_0_S50_L006.narrowPeak.gz", "GSM4614799_LIB180727LH_02_PBS_48_S68_L008.narrowPeak.gz", "GSM4614819_LIB180727LH_04_TGFb_48_S54_L007.narrowPeak.gz"], "Nasopharyngeal carcinoma": ["GSM5027779_Xeno-1915_candidate_circ_junctions.bed.gz", "GSM5027777_Xeno-32_candidate_circ_junctions.bed.gz", "GSM5027782_NPC-M1_candidate_circ_junctions.bed.gz", "GSM5027780_Xeno-2117_candidate_circ_junctions.bed.gz", "GSM5027783_NPC-M2_candidate_circ_junctions.bed.gz", "GSM5027773_C666-1_candidate_circ_junctions.bed.gz", "GSM5027775_C15_candidate_circ_junctions.bed.gz", "GSM5027781_Xeno-99186_candidate_circ_junctions.bed.gz", "GSM5027778_Xeno-666_candidate_circ_junctions.bed.gz", "GSM5027774_NPC43_candidate_circ_junctions.bed.gz", "GSM5027776_C17_candidate_circ_junctions.bed.gz"], "Normal nasopharynx": ["GSM5027784_NP69_candidate_circ_junctions.bed.gz", "GSM5027787_NP550_candidate_circ_junctions.bed.gz", "GSM5027786_NP460_candidate_circ_junctions.bed.gz", "GSM5027785_NP361_candidate_circ_junctions.bed.gz"], "cultured K562 cells": ["GSM4948647_DMSO_control_2hr_normoxia_Pol2_ChIP_biorep4_peaks.narrowPeak.gz", "GSM4948651_DMSO_control_2hr_normoxia_whole_cell_ATACseq_biorep3.SLX-19339_SLX-19340.merged.sorted.macs2_peaks_peaks.narrowPeak.gz", "GSM4948678_hypoxia_1hr_wholeK562_fragment_1hr_biorep1_ATACseq6.SLX-18056_SLX-18895.merged.sorted.macs2_peaks_peaks.narrowPeak.gz", "GSM4948706_normoxia_1hr_biorep1_ChIP2.bg4_normo_hypo.narrowPeak.gz", "GSM4948681_chipseq_no_TPL_1hr_biorep1_tech1.SLX-16410_peaks.narrowPeak.gz", "GSM4948656_DRB_1hr_biorep1_tech3.SLX-16406_peaks.narrowPeak.gz", 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"GSM4948699_noDRB_biorep5_tech1.SLX-18055_peaks.narrowPeak.gz", "GSM4948669_hypoxia_1hr_biorep2_ChIP3.bg4_normo_hypo.narrowPeak.gz", "GSM4948701_noDRB_biorep5_tech3.SLX-18055_peaks.narrowPeak.gz", "GSM4948618_10uM_TPL_2hr_no_dm6_rep3.SLX-18053_peaks.narrowPeak.gz", "GSM4948695_noDRB_biorep1_tech3.SLX-16767_peaks.narrowPeak.gz", "GSM4948638_DMSO_control_2hr_hypoxia_Pol2_ChIP_biorep3_peaks.narrowPeak.gz", "GSM4948627_1uM_pyPDS_2hr_hypoxia_whole_cell_ATACseq_biorep3.SLX-19339_SLX-19340.merged.sorted.macs2_peaks_peaks.narrowPeak.gz", "GSM4948666_hypoxia_1hr_biorep1_ChIP3.bg4_normo_hypo.narrowPeak.gz", "GSM4948688_no_TPL_1hr_no_dm6_rep1.SLX-18059_peaks.narrowPeak.gz", "GSM4948721_normoxia_1hr_wholeK562_fragment_1hr_biorep3_ATACseq13.SLX-18056_SLX-18895.merged.sorted.macs2_peaks_peaks.narrowPeak.gz", "GSM4948661_DRB_1hr_biorep5_tech1.SLX-18055_peaks.narrowPeak.gz", "GSM4948673_hypoxia_1hr_Pol2_ChIP_biorep1_peaks.narrowPeak.gz", "GSM4948616_10uM_TPL_2hr_no_dm6_rep2.SLX-18053_peaks.narrowPeak.gz", "GSM4948672_hypoxia_1hr_biorep3_ChIP3.bg4_normo_hypo.narrowPeak.gz", "GSM4948615_10uM_TPL_2hr_no_dm6_rep1.SLX-18059_peaks.narrowPeak.gz", "GSM4948654_DRB_1hr_biorep1_tech2.SLX-16406_peaks.narrowPeak.gz", "GSM4948715_normoxia_1hr_Pol2_ChIP_biorep2_peaks.narrowPeak.gz", "GSM4948687_no_TPL_1hr_no_dm6_rep1.SLX-18053_peaks.narrowPeak.gz"], "cultured U2OS cells": ["GSM5222765_normoxia_1hr_U2OS_biorep1_ChIP_biorep3_peaks.narrowPeak.gz", "GSM5222753_hypoxia_1hr_U2OS_biorep1_ChIP_biorep3_peaks.narrowPeak.gz", "GSM5222759_hypoxia_1hr_U2OS_biorep4_ChIP_biorep1_peaks.narrowPeak.gz", "GSM5222757_hypoxia_1hr_U2OS_biorep3_ChIP_biorep3_peaks.narrowPeak.gz", "GSM5222773_normoxia_1hr_U2OS_biorep4_ChIP_biorep3_peaks.narrowPeak.gz", "GSM5222755_hypoxia_1hr_U2OS_biorep3_ChIP_biorep1_peaks.narrowPeak.gz", "GSM5222756_hypoxia_1hr_U2OS_biorep3_ChIP_biorep2_peaks.narrowPeak.gz", "GSM5222761_hypoxia_1hr_U2OS_biorep4_ChIP_biorep3_peaks.narrowPeak.gz", "GSM5222768_normoxia_1hr_U2OS_biorep3_ChIP_biorep2_peaks.narrowPeak.gz", "GSM5222752_hypoxia_1hr_U2OS_biorep1_ChIP_biorep2_peaks.narrowPeak.gz", "GSM5222772_normoxia_1hr_U2OS_biorep4_ChIP_biorep2_peaks.narrowPeak.gz", "GSM5222763_normoxia_1hr_U2OS_biorep1_ChIP_biorep1_peaks.narrowPeak.gz", "GSM5222760_hypoxia_1hr_U2OS_biorep4_ChIP_biorep2_peaks.narrowPeak.gz", "GSM5222767_normoxia_1hr_U2OS_biorep3_ChIP_biorep1_peaks.narrowPeak.gz", "GSM5222771_normoxia_1hr_U2OS_biorep4_ChIP_biorep1_peaks.narrowPeak.gz", "GSM5222764_normoxia_1hr_U2OS_biorep1_ChIP_biorep2_peaks.narrowPeak.gz", "GSM5222751_hypoxia_1hr_U2OS_biorep1_ChIP_biorep1_peaks.narrowPeak.gz", "GSM5222769_normoxia_1hr_U2OS_biorep3_ChIP_biorep3_peaks.narrowPeak.gz"], "Healthy control_H3K4me3": ["GSM4629479_H3K4me3_C1_HC_4.bam_peaks.broadPeak.gz", "GSM4629477_H3K4me3_C1_HC_2.bam_peaks.broadPeak.gz", "GSM4629478_H3K4me3_C1_HC_3.bam_peaks.broadPeak.gz", "GSM4629480_H3K4me3_C1_HC_5.bam_peaks.broadPeak.gz", "GSM4629476_H3K4me3_C1_HC_1.bam_peaks.broadPeak.gz"], "Rheumatoid Arthritis_H3K4me3": ["GSM4629484_H3K4me3_C1_RA_4.bam_peaks.broadPeak.gz", "GSM4629486_H3K4me3_C1_RA_6.bam_peaks.broadPeak.gz", "GSM4629491_H3K4me3_C1_RA_11.bam_peaks.broadPeak.gz", "GSM4629487_H3K4me3_C1_RA_7.bam_peaks.broadPeak.gz", "GSM4629482_H3K4me3_C1_RA_2.bam_peaks.broadPeak.gz", "GSM4629483_H3K4me3_C1_RA_3.bam_peaks.broadPeak.gz", "GSM4629488_H3K4me3_C1_RA_8.bam_peaks.broadPeak.gz", "GSM4629481_H3K4me3_C1_RA_1.bam_peaks.broadPeak.gz", "GSM4629490_H3K4me3_C1_RA_10.bam_peaks.broadPeak.gz", "GSM4629489_H3K4me3_C1_RA_9.bam_peaks.broadPeak.gz", "GSM4629485_H3K4me3_C1_RA_5.bam_peaks.broadPeak.gz"], "pHGG": ["GSM4974197_GBM002-P1C8_H3K36me3_1_peaks.broadPeak.gz", "GSM4974215_GBM002-P2D3-PBr-WT_H3K36me3_1_peaks.broadPeak.gz", "GSM4974211_GBM002-P2D3-PBr-G34R_v5-tag_1_peaks.broadPeak.gz", "GSM4974207_GBM002-P2D3-PBr-G34R_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974230_GBM002-Parental_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974226_GBM002-Parental_H3K27me3_2_peaks.broadPeak.gz", "GSM4974213_GBM002-P2D3-PBr-WT_H3K27me3_1_peaks.broadPeak.gz", "GSM4974223_GBM002-Parental_G34R_1_peaks.broadPeak.gz", "GSM4974214_GBM002-P2D3-PBr-WT_H3K27me3_2_peaks.broadPeak.gz", "GSM4974222_GBM002-P2D3-PBr-WT_v5-tag_2_peaks.broadPeak.gz", "GSM4974206_GBM002-P2D3-PBr-G34R_H3K36me3_2_peaks.broadPeak.gz", "GSM4974217_GBM002-P2D3-PBr-WT_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974212_GBM002-P2D3-PBr-G34R_v5-tag_2_peaks.broadPeak.gz", "GSM4974194_GBM002-P1C8_G34R_2_peaks.broadPeak.gz", "GSM4974199_GBM002-P1C8_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974200_GBM002-P1C8_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974205_GBM002-P2D3-PBr-G34R_H3K36me3_1_peaks.broadPeak.gz", "GSM4974203_GBM002-P2D3-PBr-G34R_H3K27me3_1_peaks.broadPeak.gz", "GSM4974198_GBM002-P1C8_H3K36me3_2_peaks.broadPeak.gz", "GSM4974196_GBM002-P1C8_H3K27me3_2_peaks.broadPeak.gz", "GSM4974216_GBM002-P2D3-PBr-WT_H3K36me3_2_peaks.broadPeak.gz", "GSM4974221_GBM002-P2D3-PBr-WT_v5-tag_1_peaks.broadPeak.gz", "GSM4974224_GBM002-Parental_G34R_2_peaks.broadPeak.gz", "GSM4974229_GBM002-Parental_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974208_GBM002-P2D3-PBr-G34R_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974204_GBM002-P2D3-PBr-G34R_H3K27me3_2_peaks.broadPeak.gz", "GSM4974195_GBM002-P1C8_H3K27me3_1_peaks.broadPeak.gz", "GSM4974218_GBM002-P2D3-PBr-WT_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974193_GBM002-P1C8_G34R_1_peaks.broadPeak.gz", "GSM4974225_GBM002-Parental_H3K27me3_1_peaks.broadPeak.gz", "GSM4974228_GBM002-Parental_H3K36me3_2_peaks.broadPeak.gz", "GSM4974227_GBM002-Parental_H3K36me3_1_peaks.broadPeak.gz"], "FACS-sorted neuronal (NeuN+) nuclei": ["GSM4663521_ACC_1936_AP_peaks.narrowPeak.gz", "GSM4663519_ACC_1927_AN_peaks.narrowPeak.gz"], "FACS-sorted non-neuronal (NeuN-) nuclei": ["GSM4663520_ACC_1927_AP_peaks.narrowPeak.gz"], "liver": ["GSM5060174_HSE-K27AC-TNF-2.FCHK5LJBBXY_L8_R1_ICAGATC.PE_macs2_peaks.bed.gz", "GSM5075790_HSE-K27AC-TNF-2.FCHK5LJBBXY_L8_R1_ICAGATC.PE_macs2_peaks.bed.gz", "GSM5075786_HSE-K27AC-Ctrl-2.FCHK5LJBBXY_L8_R1_ITTAGGC.PE_macs2_peaks.bed.gz", "GSM5060177_HSE-NF-kB-TNF-2.FCHK5LJBBXY_L8_R1_IATGTCA.PE_macs2_peaks.bed.gz", "GSM5075784_HSE-K27AC-Ctrl-1.FCHK5LJBBXY_L8_R1_IATCACG.PE_macs2_peaks.bed.gz", "GSM5060168_HSE-K27AC-Ctrl-1.FCHK5LJBBXY_L8_R1_IATCACG.PE_macs2_peaks.bed.gz", "GSM5060172_HSE-K27AC-TNF-1.FCHK5LJBBXY_L8_R1_IACAGTG.PE_macs2_peaks.bed.gz", "GSM5075788_HSE-K27AC-TNF-1.FCHK5LJBBXY_L8_R1_IACAGTG.PE_macs2_peaks.bed.gz", "GSM5060170_HSE-K27AC-Ctrl-2.FCHK5LJBBXY_L8_R1_ITTAGGC.PE_macs2_peaks.bed.gz", "GSM5075793_HSE-NF-kB-TNF-2.FCHK5LJBBXY_L8_R1_IATGTCA.PE_macs2_peaks.bed.gz"], "DLD1": ["GSM4974437_DMSO1_bwa_peaks.narrowPeak.gz", "GSM4974441_AZD_bwa_peaks.narrowPeak.gz", "GSM4974438_DMSO2_bwa_peaks.narrowPeak.gz", "GSM4974443_ZM_bwa_RC_peaks.narrowPeak.gz"], "Cytotrophoblast": ["GSM5104917_Cytotrophoblast_vitD_H3K4me3-2.broadPeak.gz", "GSM5104912_Cytotrophoblast_vitD_H3K27ac-1.broadPeak.gz", "GSM5104916_Cytotrophoblast_vitD_H3K4me3-1.broadPeak.gz", "GSM5104910_Cytotrophoblast_control_H3K27ac-1.broadPeak.gz", "GSM5104913_Cytotrophoblast_vitD_H3K27ac-2.broadPeak.gz", "GSM5104911_Cytotrophoblast_control_H3K27ac-2.broadPeak.gz", "GSM5104914_Cytotrophoblast_control_H3K4me3-1.broadPeak.gz", "GSM5104915_Cytotrophoblast_control_H3K4me3-2.broadPeak.gz"], "ChIP-seq LAPC4 KLF4 EtOH": ["GSM4891299_KLF4_V_rep1_peaks.narrowPeak.bed.gz", "GSM4891300_KLF4_V_rep2_peaks.narrowPeak.bed.gz"], "ChIP-seq LAPC4 KLF4 DHT": ["GSM4891301_KLF4_DHT_rep1_peaks.narrowPeak.bed.gz", "GSM4891302_KLF4_DHT_rep2_peaks.narrowPeak.bed.gz"], "ChIP-seq LAPC4 AR EtOH": ["GSM4891303_AR_V_rep1_peaks.narrowPeak.bed.gz", "GSM4891304_AR_V_rep2_peaks.narrowPeak.bed.gz"], "ChIP-seq LAPC4 AR DHT": ["GSM4891305_AR_DHT_rep1_peaks.narrowPeak.bed.gz", "GSM4891306_AR_DHT_rep2_peaks.narrowPeak.bed.gz"], "non-activated CD8 T cell": ["GSM5066032_peak_nonAct_02.narrowPeak.gz", "GSM5066031_peak_nonAct_01.narrowPeak.gz", "GSM5066033_peak_nonAct_03.narrowPeak.gz"], "mock-treated CD8 T cell": ["GSM5066034_peak_Act_01.narrowPeak.gz", "GSM5066035_peak_Act_02.narrowPeak.gz", "GSM5066036_peak_Act_03.narrowPeak.gz"], "SAM-treated CD8 T cell": ["GSM5066038_peak_SAM_02.narrowPeak.gz", "GSM5066037_peak_SAM_01.narrowPeak.gz", "GSM5066039_peak_SAM_03.narrowPeak.gz"], "MTA-treated CD8 T cell": ["GSM5066040_peak_MTA_01.narrowPeak.gz", "GSM5066042_peak_MTA_03.narrowPeak.gz", "GSM5066041_peak_MTA_02.narrowPeak.gz"], "Cal-27 cells & S2 cells (spiked-in)": ["GSM4508630_Cal27_KO1.H3K27ac.narrowPeak.gz", "GSM4508624_Cal27.H3K27ac.narrowPeak.gz", "GSM4508636_Cal27_KO17.H3K27ac.narrowPeak.gz"], "Detroit-562 cells & S2 cells (spiked-in)": ["GSM4508660_Det562_KO4.H3K27ac.narrowPeak.gz", "GSM4508648_Det562_KO1.H3K27ac.narrowPeak.gz", "GSM4508642_Det562.H3K27ac.narrowPeak.gz", "GSM4508654_Det562_KO2.H3K27ac.narrowPeak.gz"], "breast cancer cells": ["GSM4929585_MUT_AM.rep2_5foldpeaks.bed.gz", "GSM4929593_MUT_GE_FLAG.rep2_5foldpeaks.bed.gz", "GSM4929583_WT.rep2_5foldpeaks.bed.gz", "GSM4929588_WT_FLAG.rep1_5foldpeaks.bed.gz", "GSM4929589_WT_FLAG.rep2_5foldpeaks.bed.gz", "GSM4929584_MUT_AM.rep1_5foldpeaks.bed.gz", "GSM4929590_MUT_AM_FLAG.rep1_5foldpeaks.bed.gz", "GSM4929582_WT.rep1_5foldpeaks.bed.gz", "GSM4929586_MUT_GE.rep1_5foldpeaks.bed.gz", "GSM4929592_MUT_GE_FLAG.rep1_5foldpeaks.bed.gz", "GSM4929591_MUT_AM_FLAG.rep2_5foldpeaks.bed.gz", "GSM4929587_MUT_GE.rep2_5foldpeaks.bed.gz"], "iPSC-derived microglia cells": ["GSM4977139_PPMI_iMGL_3453.narrowPeak.gz", "GSM4977137_PPMI_iMGL_3411.narrowPeak.gz", "GSM4977138_PPMI_iMGL_3446.narrowPeak.gz", "GSM4977140_PPMI_iMGL_4101.narrowPeak.gz"], "iPSC-derived forebrain neuron cells": ["GSM4977141_33i_FBn_50katac1.narrowPeak.gz", "GSM4977142_33i_FBn_50katac2.narrowPeak.gz", "GSM4977143_33i_FBn_50katac3.narrowPeak.gz"], "Macrophage": ["GSM2083767_24h-Mac-Rep2.peaks.bed.gz", "GSM5012259_M2_12hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM2083774_48h-MacLPS-Rep3.peaks.bed.gz", "GSM5012280_M2_IRF7_KD_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012251_M1_12hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012245_Mac_0hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM2083764_12h-Mac-Rep2.peaks.bed.gz", "GSM2083772_48h-MacLPS-Rep1.peaks.bed.gz", "GSM5012253_M1_24hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012285_M2_ID2_KD_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM2083780_120h-Mac-Rep3.peaks.bed.gz", "GSM2083775_96h-Mac-Rep1.peaks.bed.gz", "GSM5012274_M2_Neg_Ctrl_KD_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012260_M2_24hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012278_M2_IRF1_KD_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM2083757_3h-Mac-Rep1.peaks.bed.gz", "GSM5012249_M1_6hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM2083779_120h-Mac-Rep2.peaks.bed.gz", "GSM2083777_96h-Mac-Rep3.peaks.bed.gz", "GSM2083782_120h-MacLPS-Rep2.peaks.bed.gz", "GSM5012283_M2_IRF9_KD_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM2083769_48h-Mac-Rep1.peaks.bed.gz", "GSM2083778_120h-Mac-Rep1.peaks.bed.gz", "GSM2083762_6h-Mac-Rep3.peaks.bed.gz", "GSM5012250_M1_12hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM2083760_6h-Mac-Rep1.peaks.bed.gz", "GSM5012279_M2_IRF1_KD_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM2083768_24h-Mac-Rep3.peaks.bed.gz", "GSM2083765_12h-Mac-Rep3.peaks.bed.gz", "GSM5012256_M2_6hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012261_M2_24hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012258_M2_12hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM2083771_48h-Mac-Rep3.peaks.bed.gz", "GSM5012246_M1_3hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM2083758_3h-Mac-Rep2.peaks.bed.gz", "GSM5012277_M2_Pos_Ctrl_KD_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM2083759_3h-Mac-Rep3.peaks.bed.gz", "GSM2083761_6h-Mac-Rep2.peaks.bed.gz", "GSM2083770_48h-Mac-Rep2.peaks.bed.gz", "GSM5012254_M2_3hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012244_Mac_0hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012284_M2_ID2_KD_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012282_M2_IRF9_KD_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012275_M2_Neg_Ctrl_KD_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012248_M1_6hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM2083781_120h-MacLPS-Rep1.peaks.bed.gz", "GSM2083766_24h-Mac-Rep1.peaks.bed.gz", "GSM5012255_M2_3hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM2083783_120h-MacLPS-Rep3.peaks.bed.gz", "GSM2083776_96h-Mac-Rep2.peaks.bed.gz", "GSM5012281_M2_IRF7_KD_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012242_HL60_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM2083773_48h-MacLPS-Rep2.peaks.bed.gz", "GSM5012243_HL60_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012247_M1_3hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012252_M1_24hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM2083763_12h-Mac-Rep1.peaks.bed.gz", "GSM5012257_M2_6hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012276_M2_Pos_Ctrl_KD_Rep1_bATACseq_HomerPeaks.bed.gz"], "Ovarian cancer cell line": ["GSM5019869_D_peaks_VORINOSTAT2.bed.gz", "GSM5019867_B_peaks_UNTREATED.bed.gz", "GSM5019869_D_peaks_VORINOSTAT1.bed.gz", "GSM5019871_F_peaks_ROMIDEPSIN1.bed.gz", "GSM5019871_F_peaks_ROMIDEPSIN2.bed.gz"], "Human Tumor Cells": ["GSM5008035_H3K27me3TMZ_D4_summits.bed.gz", "GSM5008036_K27acDMSO_D4_peaks.narrowPeak.gz", "GSM5008034_H3K27me3TMZ_24_summits.bed.gz", "GSM5008037_K27acTMZ_D4_peaks.narrowPeak.gz", "GSM5008037_K27acTMZ_D4_summits.bed.gz", "GSM5008033_EZH2_TMZD4_peaks.narrowPeak.gz", "GSM5008036_K27acDMSO_D4_summits.bed.gz", "GSM5008032_EZH2TMZ_24_summits.bed.gz", "GSM5008034_H3K27me3TMZ_24_peaks.narrowPeak.gz", "GSM5008032_EZH2TMZ_24_peaks.narrowPeak.gz", "GSM5008035_H3K27me3TMZ_D4_peaks.narrowPeak.gz", "GSM5008033_EZH2_TMZD4_summits.bed.gz"], "Primordial hemogenic endothelium from H9": ["GSM4159486_ATACseq_D4pDOXRep2.bed.gz", "GSM4159485_ATACseq_D4pDOXRep1.bed.gz", "GSM4159484_ATACseq_D4mDOXRep2.bed.gz", "GSM4159483_ATACseq_D4mDOXRep1.bed.gz"], "T47D cell line": ["GSM3563765_T47D_D538G_Vehicle_peaks.bed.gz", "GSM3563766_T47D_D538G_E2_peaks.bed.gz", "GSM3563762_T47D_Y537S_Vehicle_peaks.bed.gz", "GSM3563760_T47D_WT_E2_peaks.bed.gz", "GSM3563763_T47D_Y537S_E2_peaks.bed.gz", "GSM3563759_T47D_WT_Vehicle_peaks.bed.gz"], "Macrophages": ["GSM4955047_LSJ-A-C-H3K4me3.narrowPeak.gz", "GSM4955050_LSJ-B-D-H3K4me3.narrowPeak.gz", "GSM4955046_LSJ-A-C-H3K27ac.narrowPeak.gz", "GSM4955049_LSJ-B-D-H3K27ac.narrowPeak.gz"], "HEK293 cell lines": ["GSM4332097_AGO2_without_siRNA_clusters.bed.gz", "GSM4332101_D597A_with_siLMNA_clusters.bed.gz", "GSM4318404_AGO2_with_siTP53_clusters.bed.gz", "GSM4332099_D669A_without_siRNA_clusters.bed.gz", "GSM4332100_AGO2_with_siLMNA_clusters.bed.gz", "GSM4318405_D597A_with_siTP53_clusters.bed.gz", "GSM4332098_D597A_without_siRNA_clusters.bed.gz"], "Buffy coat": ["GSM4819759_95_L.bed.gz", "GSM4819755_92_L.bed.gz", "GSM4819757_94_L.bed.gz", "GSM4819754_92_H.bed.gz", "GSM4819756_94_H.bed.gz", "GSM4819758_95_H.bed.gz"], "NK cells": ["GSM4801588_BSF_0660_HCG27BBXY_2_Liver40_CD49a_pos_unstim_S55905_sorted_mq10.bed.gz", "GSM4878497_KHYG1_299_rep2.rep1_sorted_peaks.narrowPeak.gz", "GSM4801587_BSF_0660_HCG27BBXY_2_Liver40_CD49a_neg_unstim_S55907_sorted_mq10.bed.gz", "GSM4801590_BSF_0660_HCG27BBXY_2_Liver41_CD49a_pos_unstim_S55913_sorted_mq10.bed.gz", "GSM4878494_KHYG1_DMSO_rep1.rep1_sorted_peaks.narrowPeak.gz", "GSM4801591_BSF_0660_HCG27BBXY_2_Liver39_CD45a_neg_stim_S55910_sorted_mq10.bed.gz", "GSM4878495_KHYG1_DMSO_rep2.rep1_sorted_peaks.narrowPeak.gz", "GSM4801596_BSF_0660_HCG27BBXY_2_Liver41_CD49a_pos_stim_S55914_sorted_mq10.bed.gz", "GSM4801593_BSF_0660_HCG27BBXY_3_Liver40_CD49a_neg_stim_S55924_sorted_mq10.bed.gz", "GSM4801592_BSF_0660_HCG27BBXY_3_Liver39_CD49a_pos_stim_S55920_sorted_mq10.bed.gz", "GSM4801595_BSF_0660_HCG27BBXY_2_Liver41_CD49a_neg_stim_S55903_sorted_mq10.bed.gz", "GSM4878496_KHYG1_299_rep1.rep1_sorted_peaks.narrowPeak.gz", "GSM4801594_BSF_0660_HCG27BBXY_3_Liver40_CD49a_pos_stim_S55925_sorted_mq10.bed.gz", "GSM4801585_BSF_0660_HCG27BBXY_2_Liver39_CD45a_neg_unstim_S55909_sorted_mq10.bed.gz", "GSM4801586_BSF_0660_HCG27BBXY_3_Liver39_CD49a_pos_unstim_S55926_sorted_mq10.bed.gz", "GSM4801589_BSF_0660_HCG27BBXY_2_Liver41_CD49a_neg_unstim_S55908_sorted_mq10.bed.gz"], "hESC": ["GSM4875719_hES_shOTUD5_rep3-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875718_hES_shOTUD5_rep2-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875716_hES_shCTRL_rep3-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875715_hES_shCTRL_rep2-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875717_hES_shOTUD5_rep1-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875714_hES_shCTRL_rep1-pr.idr0.05.bfilt.narrowPeak.gz"], "Neural_Conversion_day3": ["GSM4875724_NC3_shOTUD5_rep2-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875721_NC3_shCTRL_rep2-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875722_NC3_shCTRL_rep3-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875720_NC3_shCTRL_rep1-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875723_NC3_shOTUD5_rep1-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875725_NC3_shOTUD5_rep3-pr.idr0.05.bfilt.narrowPeak.gz"], "Primary Proximal Tubule Epithelial Cells": ["GSM4332081_RN084_peaks.narrowPeak.gz", "GSM4332077_RN080_peaks.narrowPeak.gz", "GSM4332075_RN078_peaks.narrowPeak.gz", "GSM4332078_RN081_peaks.narrowPeak.gz", "GSM4332076_RN079_peaks.narrowPeak.gz", "GSM4332074_RN077_peaks.narrowPeak.gz", "GSM4332079_RN082_peaks.narrowPeak.gz", "GSM4332080_RN083_peaks.narrowPeak.gz"], "Tonsillar B cells": ["GSM4837475_NaiveB_B3_T1.ATACseq.narrowPeak.gz", "GSM4837479_Lightzone_germ_B1_T1.ATACseq.narrowPeak.gz", "GSM4837480_Lightzone_germ_B2_T1.ATACseq.narrowPeak.gz", "GSM4837477_MemoryB_B2_T1.ATACseq.narrowPeak.gz", "GSM4837481_Lightzone_germ_B3_T1.ATACseq.narrowPeak.gz", "GSM4837482_Darkzone_germ_B1_T1.ATACseq.narrowPeak.gz", "GSM4837483_Darkzone_germ_B2_T1.ATACseq.narrowPeak.gz", "GSM4837473_NaiveB_B1_T1.ATACseq.narrowPeak.gz", "GSM4837476_MemoryB_B1_T1.ATACseq.narrowPeak.gz", "GSM4837484_Darkzone_germ_B3_T1.ATACseq.narrowPeak.gz", "GSM4837478_MemoryB_B3_T1.ATACseq.narrowPeak.gz", "GSM4837485_Plasma_B1_T1.ATACseq.narrowPeak.gz", "GSM4837474_NaiveB_B2_T1.ATACseq.narrowPeak.gz", "GSM4837486_Plasma_B2_T1.ATACseq.narrowPeak.gz", "GSM4837487_Plasma_B3_T1.ATACseq.narrowPeak.gz"], "Breast cancer cell line": ["GSM4710522_E3-MDA_1-pol-21.FCHWYW5BBXX_L2_R1_ITCGAGCGT.PE_macs2_peaks.bed.gz", "GSM4710500_KA37.FCHNKLLBBXX_L6_R1_ITCTCGCGC-CCTATCCT.PE_macs2_peaks.bed.gz", "GSM4710524_E3-MDA_3-pol-23.FCHWYW5BBXX_L2_R1_IGTGCTACC.PE_macs2_peaks.bed.gz", "GSM4710518_E2-MDA_2-NF-10.FCHWYW5BBXX_L1_R1_ITAGCTTGT.PE_macs2_peaks.bed.gz", "GSM4710523_E3-MDA_2-pol-22.FCHWYW5BBXX_L2_R1_ITGATACGT.PE_macs2_peaks.bed.gz", "GSM4710498_KA34.FCHNKLLBBXX_L6_R1_ICGGCTATG-TATAGCCT.PE_macs2_peaks.bed.gz", "GSM4710520_E2-MDA_4-NF-12.FCHWYW5BBXX_L1_R1_ICTTGTACT.PE_macs2_peaks.bed.gz", "GSM4710502_KA35.FCHNKLLBBXX_L6_R1_ITCCGCGAA-ATAGAGGC.PE_macs2_peaks.bed.gz", "GSM4710521_E3-MDA_4-NF-20.FCHWYW5BBXX_L2_R1_ITTGGAGGT.PE_macs2_peaks.bed.gz", "GSM4710503_KA62.FCHNKLLBBXX_L8_R1_ICTGAAGCT-CAGGACGT.PE_macs2_peaks.bed.gz", "GSM4710505_KA64.FCHNKLLBBXX_L8_R1_ITAATGCGC-GTACTGAC.PE_macs2_peaks.bed.gz", "GSM4710504_KA40.FCHNKLLBBXX_L7_R1_IATTACTCG-AGGCGAAG.PE_macs2_peaks.bed.gz", "GSM4710517_E3-MDA_3-NF-19.FCHWYW5BBXX_L2_R1_ITCTGCTGT.PE_macs2_peaks.bed.gz", "GSM4710525_E3-MDA_4-pol-24.FCHWYW5BBXX_L2_R1_IGGTTGGAC.PE_macs2_peaks.bed.gz", "GSM4710514_E2-MDA_1-NF-9.FCHWYW5BBXX_L1_R1_IGATCAGCG.PE_macs2_peaks.bed.gz", "GSM4710516_E2-MDA_3-NF-11.FCHWYW5BBXX_L1_R1_IGGCTACAG.PE_macs2_peaks.bed.gz", "GSM4710501_KA38.FCHNKLLBBXX_L7_R1_IAGCGATAG-GGCTCTGA.PE_macs2_peaks.bed.gz", "GSM4710519_E3-MDA_2-NF-18.FCHWYW5BBXX_L2_R1_ITTCTGTGT.PE_macs2_peaks.bed.gz", "GSM4710499_KA61.FCHNKLLBBXX_L8_R1_IGAATTCGT-TAATCTTA.PE_macs2_peaks.bed.gz", "GSM4710515_E3-MDA_1-NF-17.FCHWYW5BBXX_L2_R1_ITGTACCTT.PE_macs2_peaks.bed.gz"], "U87MG": ["GSM4704854_CRISPR_p53.U-87_MG_wild_type_rep3_GCT.bed.gz", "GSM4704861_CRISPR_p53.clone_e5_2-4-8_rep1_GCG.bed.gz", "GSM4704874_CRISPR_p53.clone_e5_2-5-12_rep2_ACC.bed.gz", "GSM4704867_CRISPR_p53.clone_e5_2-5-9_rep1_AGT.bed.gz", "GSM4704853_CRISPR_p53.U-87_MG_wild_type_rep2_ACG.bed.gz", "GSM4704866_CRISPR_p53.clone_e5_2-5-5_rep3_ACG.bed.gz", "GSM4704859_CRISPR_p53.clone_e5_2-4-2_rep2_GCT.bed.gz", "GSM4704856_CRISPR_p53.clone_e5_2-3-4_rep2_AGT.bed.gz", "GSM4704860_CRISPR_p53.clone_e5_2-4-2_rep3_ACC.bed.gz", "GSM4704872_CRISPR_p53.clone_e5_2-5-11_rep3_AGT.bed.gz", "GSM4704863_CRISPR_p53.clone_e5_2-4-8_rep3_TAC.bed.gz", "GSM4704852_CRISPR_p53.U-87_MG_wild_type_rep1_TAC.bed.gz", "GSM4704864_CRISPR_p53.clone_e5_2-5-5_rep1_ATG.bed.gz", "GSM4704873_CRISPR_p53.clone_e5_2-5-12_rep1_GCT.bed.gz", "GSM4704871_CRISPR_p53.clone_e5_2-5-11_rep2_CAC.bed.gz", "GSM4704869_CRISPR_p53.clone_e5_2-5-9_rep3_ATG.bed.gz", "GSM4704875_CRISPR_p53.clone_e5_2-5-12_rep3_CAC.bed.gz", "GSM4704870_CRISPR_p53.clone_e5_2-5-11_rep1_ACC.bed.gz", "GSM4704858_CRISPR_p53.clone_e5_2-4-2_rep1_ACG.bed.gz", "GSM4704865_CRISPR_p53.clone_e5_2-5-5_rep2_TAC.bed.gz", "GSM4704862_CRISPR_p53.clone_e5_2-4-8_rep2_ATG.bed.gz", "GSM4704857_CRISPR_p53.clone_e5_2-3-4_rep3_GCG.bed.gz", "GSM4704855_CRISPR_p53.clone_e5_2-3-4_rep1_CAC.bed.gz", "GSM4704868_CRISPR_p53.clone_e5_2-5-9_rep2_GCG.bed.gz"], "Human bladder tumor organoid": ["GSM4201830_Basal2_BMP_o.e_CAF-FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201664_Basal2_FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz", "GSM4483247_Basal2_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201672_Luminal2_FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz", "GSM4483259_Luminal2_FOXA1_k.o_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201667_Basal1_BMP_o.e_CAF-FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz", "GSM4201838_Luminal2_BMP_k.o_CAF_ChIP_peaks.narrowPeak.gz", "GSM4201668_Basal2_BMP_o.e_CAF-FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz", "GSM4483253_Basal2_BMP_o.e_CAF-FOXA1_k.o_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201827_Basal1_BMP_o.e_CAF_ChIP_peaks.narrowPeak.gz", "GSM4201662_Basal2_ATAC_peaks.narrowPeak.gz", "GSM4201826_Basal2_FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz", "GSM4483263_Luminal2_BMP_k.o_CAF-FOXA1_o.e_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201828_Basal2_BMP_o.e_CAF_ChIP_peaks.narrowPeak.gz", "GSM4483261_Luminal2_BMP_k.o_CAF_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201674_Luminal2_BMP_k.o_CAF_ATAC_peaks.narrowPeak.gz", "GSM4483246_Basal1_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4483248_Basal1_FOXA1_o.e_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4483252_Basal1_BMP_o.e_CAF-FOXA1_k.o_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201837_Luminal1_BMP_k.o_CAF_ChIP_peaks.narrowPeak.gz", "GSM4483256_Luminal1_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201834_Luminal2_ChIP_peaks.narrowPeak.gz", "GSM4201665_Basal1_BMP_o.e_CAF_ATAC_peaks.narrowPeak.gz", "GSM4201833_Luminal1_ChIP_peaks.narrowPeak.gz", "GSM4201836_Luminal2_FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201663_Basal1_FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz", "GSM4201669_Luminal1_ATAC_peaks.narrowPeak.gz", "GSM4201839_Luminal1_BMP_k.o_CAF-FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz", "GSM4483250_Basal1_BMP_o.e_CAF_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201673_Luminal1_BMP_k.o_CAF_ATAC_peaks.narrowPeak.gz", "GSM4483260_Luminal1_BMP_k.o_CAF_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201829_Basal1_BMP_o.e_CAF-FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201676_Luminal2_BMP_k.o_CAF-FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz", "GSM4201825_Basal1_FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201840_Luminal2_BMP_k.o_CAF-FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201675_Luminal1_BMP_k.o_CAF-FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz", "GSM4483249_Basal2_FOXA1_o.e_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4483257_Luminal2_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201823_Basal1_ChIP_peaks.narrowPeak.gz", "GSM4201835_Luminal1_FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201666_Basal2_BMP_o.e_CAF_ATAC_peaks.narrowPeak.gz", "GSM4201661_Basal1_ATAC_peaks.narrowPeak.gz", "GSM4483262_Luminal1_BMP_k.o_CAF-FOXA1_o.e_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201670_Luminal2_ATAC_peaks.narrowPeak.gz", "GSM4483258_Luminal1_FOXA1_k.o_tumor_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201824_Basal2_ChIP_peaks.narrowPeak.gz", "GSM4483251_Basal2_BMP_o.e_CAF_H3K27ac_ChIP_peaks.narrowPeak.gz", "GSM4201671_Luminal1_FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz"], "CNE2 cells (S18)": ["GSM4796501_S18-EBNA2Con-H3K27ac-Rep1.bed.gz", "GSM4796502_S18-EBNA2Con-H3K27ac-Rep2.bed.gz", "GSM4796503_S18-EBNA2Dox10ug-H3K27ac-Rep1.bed.gz", "GSM4796504_S18-EBNA2Dox10ug-H3K27ac-Rep2.bed.gz", "GSM4796500_S18-Dox10ug-H3K27ac-Rep2.bed.gz", "GSM4796499_S18-Dox10ug-H3K27ac-Rep1.bed.gz"], "BJAB cells": ["GSM5426082_EBNA2-H3K27ac-Rep1.bed.gz", "GSM5426083_EBNA2-H3K27ac-Rep2.bed.gz", "GSM5426087_EBNA2-ATAC-Rep1_peaks.broadPeak.gz", "GSM5426085_SCNG-H3K27ac-Rep1.bed.gz", "GSM5426090_SCNG-ATAC-Rep2_peaks.broadPeak.gz", "GSM5426089_SCNG-ATAC-Rep1_peaks.broadPeak.gz", "GSM5426086_SCNG-H3K27ac-Rep2.bed.gz", "GSM5426088_EBNA2-ATAC-Rep2_peaks.broadPeak.gz"], "Lung epithial cell": ["GSM4732799_NT-3.1Loop-H3.3_peaks.narrowPeak.gz", "GSM4732797_NT-H3.1-PolyA-H3.3_peaks.narrowPeak.gz", "GSM4732801_NT-Empty-H3.3_peaks.narrowPeak.gz", "GSM4732795_FH3.3-NT-H3.1-Loop_peaks.narrowPeak.gz", "GSM4732803_As-96h-H3.3_peaks.narrowPeak.gz", "GSM4732805_Ctrl-96h-H3.3_peaks.narrowPeak.gz", "GSM4732793_FH3.3-NT-Empty_peaks.narrowPeak.gz"], "na\u00efve CD4+ T-cell": ["GSM4758358_L2_bio2_con_TKD180802550_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758360_L3_bio4_con_TKD180802554_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758357_L2_bio1_con_TKD180802548_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758359_L2_bio3_con_TKD180802552_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758351_L2_bio1_act_TKD180802547_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758362_L3_bio6_con_TKD180802558_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758361_L3_bio5_con_TKD180901492_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758355_L3_bio5_act_TKD180802555_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758352_L2_bio2_act_TKD180901491_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758354_L3_bio4_act_TKD180802553_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758356_L3_bio6_act_TKD180901493_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758353_L2_bio3_act_TKD180802551_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Purified AT2 alveolar epithelial cells": ["GSM4250941_AEC_Donor1_H3K27ac_D0_VS_AEC_Donor1_INPUT_D0.narrowPeak.gz", "GSM4250944_AEC_Donor2_ATAC_D0.narrowPeak.gz"], "Transitional AT2-to-AT1 alveolar epithelial cells": ["GSM4250942_AEC_Donor1_H3K27ac_D4_VS_AEC_Donor1_INPUT_D4.narrowPeak.gz"], "Differentiated AT2-like alveolar epithelial cells": ["GSM4250943_AEC_Donor1_H3K27ac_D6_VS_AEC_Donor1_INPUT_D6.narrowPeak.gz"], "Bone Marrow": ["GSM4910551_12FMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910538_06MMDN_H3K04ME3_PEAKS.bed.bz2", "GSM4910549_12FMPN_H3K04ME1_PEAKS.bed.bz2", "GSM4910542_07FMDY_H3K04ME3_PEAKS.bed.bz2", "GSM4910539_06MMDN_H3K27ME3_PEAKS.bed.bz2", "GSM4910555_13MMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910537_06MMDN_H3K04ME1_PEAKS.bed.bz2", "GSM4910547_11MMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910558_18MMPN_H3K04ME3_PEAKS.bed.bz2", "GSM4910559_18MMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910546_11MMDN_H3K04ME3_PEAKS.bed.bz2", "GSM4910554_13MMPN_H3K04ME3_PEAKS.bed.bz2", "GSM4910545_11MMDN_H3K04ME1_PEAKS.bed.bz2", "GSM4910543_07FMDY_H3K27ME3_PEAKS.bed.bz2", "GSM4910553_13MMPN_H3K04ME1_PEAKS.bed.bz2", "GSM4910557_18MMPN_H3K04ME1_PEAKS.bed.bz2", "GSM4910550_12FMPN_H3K04ME3_PEAKS.bed.bz2", "GSM4910541_07FMDY_H3K04ME1_PEAKS.bed.bz2"], "A549 cells": ["GSM4721541_WSN3M_Pol2_s2p_peaks.narrowPeak.gz", "GSM4721539_WSN3M_Pol2_peaks.narrowPeak.gz", "GSM4721542_WSNdelNS1_Pol2_peaks.narrowPeak.gz", "GSM4721537_Mock_Pol2_s5p_peaks.narrowPeak.gz", "GSM4721538_Mock_Pol2_s2p_peaks.narrowPeak.gz", "GSM4721544_WSNdelNS1_Pol2_s2p_peaks.narrowPeak.gz", "GSM4721547_WSNWT_Pol2_s2p_peaks.narrowPeak.gz", "GSM4721540_WSN3M_Pol2_s5p_peaks.narrowPeak.gz", "GSM4721543_WSNdelNS1_Pol2_s5p_peaks.narrowPeak.gz", "GSM4721546_WSNWT_Pol2_s5p_peaks.narrowPeak.gz", "GSM4721545_WSNWT_Pol2_peaks.narrowPeak.gz", "GSM4721536_Mock_Pol2_peaks.narrowPeak.gz"], "Derived from human embryonic stem cells (WA09 WiCell, WAe009-A)": ["GSM4506446_H9BA_D15.narrowPeak.gz", "GSM4506445_H9BA_D8.narrowPeak.gz", "GSM4506447_H9BA_D20.narrowPeak.gz", "GSM4506443_H9PM.narrowPeak.gz", "GSM4506444_H9BA_D4.narrowPeak.gz", "GSM4506448_H9BA_D24.narrowPeak.gz"], "Human postnatal thymus": ["GSM4566011_macs2_me3_SP8P_d2_20.bam_peaks.broadPeak.gz", "GSM4566042_macs2_ac_DP3P_d1_52.bam_summits.bed.gz", "GSM4566036_macs2_k4_gd1P_d2_45.bam_summits.bed.gz", "GSM4566027_macs2_k4_34P1M_d2_36.bam_summits.bed.gz", "GSM4565993_macs2_me3_34P1P_d1_2.bam_peaks.broadPeak.gz", "GSM4566034_macs2_k4_SP8P_d2_43.bam_summits.bed.gz", "GSM4566023_macs2_k4_SP8P_d1_32.bam_summits.bed.gz", "GSM4565999_macs2_me3_SP8P_d1_8.bam_peaks.broadPeak.gz", "GSM4566057_macs2_ac_gd1M_d2_66.bam_summits.bed.gz", "GSM4566008_macs2_me3_DP3P_d2_18.bam_peaks.broadPeak.gz", "GSM4566046_macs2_ac_gd1M_d1_55.bam_summits.bed.gz", "GSM4566055_macs2_ac_SP4P_d2_64.bam_summits.bed.gz", "GSM4566018_macs2_k4_34P4P_d1_27.bam_summits.bed.gz", "GSM4565996_macs2_me3_DP3P_d1_6.bam_peaks.broadPeak.gz", "GSM4566019_macs2_k4_DP3M_d1_29.bam_summits.bed.gz", "GSM4566056_macs2_ac_SP8P_d2_65.bam_summits.bed.gz", "GSM4566031_macs2_k4_DP3P_d2_41.bam_summits.bed.gz", "GSM4565992_macs2_me3_34P1M_d1_1.bam_peaks.broadPeak.gz", "GSM4566024_macs2_k4_gd1M_d1_33.bam_summits.bed.gz", "GSM4565994_macs2_me3_34P4P_d1_3.bam_peaks.broadPeak.gz", "GSM4566054_macs2_ac_ISP_d2_61.bam_summits.bed.gz", "GSM4566032_macs2_k4_ISP_d2_39.bam_summits.bed.gz", "GSM4566044_macs2_ac_SP4P_d1_53.bam_summits.bed.gz", "GSM4566009_macs2_me3_ISP_d2_16.bam_peaks.broadPeak.gz", "GSM4566017_macs2_k4_34P1P_d1_26.bam_summits.bed.gz", "GSM4566016_macs2_k4_34P1M_d1_25.bam_summits.bed.gz", "GSM4566053_macs2_ac_DP3P_d2_63.bam_summits.bed.gz", "GSM4566038_macs2_ac_34P1M_d1_47.bam_summits.bed.gz", "GSM4566012_macs2_me3_gd1M_d2_21.bam_peaks.broadPeak.gz", "GSM4566051_macs2_ac_34P4P_d2_60.bam_summits.bed.gz", "GSM4566041_macs2_ac_DP3M_d1_51.bam_summits.bed.gz", "GSM4566028_macs2_k4_34P1P_d2_37.bam_summits.bed.gz", "GSM4565995_macs2_me3_DP3M_d1_5.bam_peaks.broadPeak.gz", "GSM4566013_macs2_me3_gd1P_d2_22.bam_peaks.broadPeak.gz", "GSM4566033_macs2_k4_SP4P_d2_42.bam_summits.bed.gz", "GSM4566045_macs2_ac_SP8P_d1_54.bam_summits.bed.gz", "GSM4566040_macs2_ac_34P4P_d1_49.bam_summits.bed.gz", "GSM4566022_macs2_k4_SP4P_d1_31.bam_summits.bed.gz", "GSM4566004_macs2_me3_34P1M_d2_13.bam_peaks.broadPeak.gz", "GSM4566006_macs2_me3_34P4P_d2_15.bam_peaks.broadPeak.gz", "GSM4565997_macs2_me3_ISP_d1_4.bam_peaks.broadPeak.gz", "GSM4566005_macs2_me3_34P1P_d2_14.bam_peaks.broadPeak.gz", "GSM4566052_macs2_ac_DP3M_d2_62.bam_summits.bed.gz", "GSM4566035_macs2_k4_gd1M_d2_44.bam_summits.bed.gz", "GSM4566047_macs2_ac_gd1P_d1_56.bam_summits.bed.gz", "GSM4566039_macs2_ac_34P1P_d1_48.bam_summits.bed.gz", "GSM4566020_macs2_k4_DP3P_d1_30.bam_summits.bed.gz", "GSM4566029_macs2_k4_34P4P_d2_38.bam_summits.bed.gz", "GSM4566030_macs2_k4_DP3M_d2_40.bam_summits.bed.gz", "GSM4566000_macs2_me3_gd1P_d1_10.bam_peaks.broadPeak.gz", "GSM4566049_macs2_ac_34P1M_d2_58.bam_summits.bed.gz", "GSM4566050_macs2_ac_34P1P_d2_59.bam_summits.bed.gz", "GSM4565998_macs2_me3_SP4P_d1_7.bam_peaks.broadPeak.gz", "GSM4566021_macs2_k4_ISP_d1_28.bam_summits.bed.gz", "GSM4566025_macs2_k4_gd1P_d1_34.bam_summits.bed.gz", "GSM4566007_macs2_me3_DP3M_d2_17.bam_peaks.broadPeak.gz", "GSM4566010_macs2_me3_SP4P_d2_19.bam_peaks.broadPeak.gz", "GSM4566043_macs2_ac_ISP_d1_50.bam_summits.bed.gz", "GSM4566001_macs2_me3_gd1M_d1_9.bam_peaks.broadPeak.gz", "GSM4566058_macs2_ac_gd1P_d2_67.bam_summits.bed.gz"], "Human cord blood CD34+": ["GSM4566014_macs2_me3_CB_d2_23.bam_peaks.broadPeak.gz", "GSM4566002_macs2_me3_CB_d1_11.bam_peaks.broadPeak.gz", "GSM4566026_macs2_k4_CB_d1_35.bam_summits.bed.gz", "GSM4566059_macs2_ac_CB_d2_68.bam_summits.bed.gz", "GSM4566048_macs2_ac_CB_d1_57.bam_summits.bed.gz", "GSM4566037_macs2_k4_CB_d2_46.bam_summits.bed.gz"], "Primary brain samples acquired post-mortem, Caudate": ["GSM4441696_CTRH_CAUD_13_0962.idr.optimal_peak.narrowPeak.gz", "GSM4441696_CTRH_CAUD_13_0962.optimal_peak.narrowPeak.gz", "GSM4441706_CTRL_CAUD_03_39.optimal_peak.narrowPeak.gz", "GSM4441702_CTRL_CAUD_03_15.optimal_peak.narrowPeak.gz", "GSM4441711_CTRL_CAUD_08_90.optimal_peak.narrowPeak.gz", "GSM4441698_CTRH_CAUD_14_0513.optimal_peak.narrowPeak.gz", "GSM4441690_CTRL_CAUD_14_1018.idr.optimal_peak.narrowPeak.gz", "GSM4441685_CTRL_CAUD_11_0393.idr.optimal_peak.narrowPeak.gz", "GSM4441700_CTRH_CAUD_15_1023.idr.optimal_peak.narrowPeak.gz", "GSM4441681_CTRL_CAUD_09_35.idr.optimal_peak.narrowPeak.gz", "GSM4441697_CTRH_CAUD_14_0380.optimal_peak.narrowPeak.gz", "GSM4441705_CTRL_CAUD_09_1589.idr.optimal_peak.narrowPeak.gz", "GSM4441711_CTRL_CAUD_08_90.idr.optimal_peak.narrowPeak.gz", "GSM4441691_CTRL_CAUD_01_31.optimal_peak.narrowPeak.gz", "GSM4441688_CTRL_CAUD_14_0586.idr.optimal_peak.narrowPeak.gz", "GSM4441709_CTRL_CAUD_04_38.optimal_peak.narrowPeak.gz", "GSM4441692_CTRH_CAUD_07_1144.idr.optimal_peak.narrowPeak.gz", "GSM4441689_CTRL_CAUD_14_0941.optimal_peak.narrowPeak.gz", "GSM4441706_CTRL_CAUD_03_39.idr.optimal_peak.narrowPeak.gz", "GSM4441685_CTRL_CAUD_11_0393.optimal_peak.narrowPeak.gz", "GSM4441704_CTRL_CAUD_06_1516.idr.optimal_peak.narrowPeak.gz", "GSM4441708_CTRL_CAUD_03_66.idr.optimal_peak.narrowPeak.gz", "GSM4441682_CTRL_CAUD_15_78.optimal_peak.narrowPeak.gz", "GSM4441695_CTRH_CAUD_10_0867.optimal_peak.narrowPeak.gz", "GSM4441707_CTRL_CAUD_03_41.idr.optimal_peak.narrowPeak.gz", "GSM4441693_CTRH_CAUD_07_1287.optimal_peak.narrowPeak.gz", "GSM4441684_CTRL_CAUD_16_32.idr.optimal_peak.narrowPeak.gz", "GSM4441692_CTRH_CAUD_07_1144.optimal_peak.narrowPeak.gz", "GSM4441694_CTRH_CAUD_08_0712.optimal_peak.narrowPeak.gz", "GSM4441699_CTRH_CAUD_14_1383.idr.optimal_peak.narrowPeak.gz", "GSM4441708_CTRL_CAUD_03_66.optimal_peak.narrowPeak.gz", "GSM4441686_CTRL_CAUD_13_0038.optimal_peak.narrowPeak.gz", "GSM4441704_CTRL_CAUD_06_1516.optimal_peak.narrowPeak.gz", "GSM4441709_CTRL_CAUD_04_38.idr.optimal_peak.narrowPeak.gz", "GSM4441702_CTRL_CAUD_03_15.idr.optimal_peak.narrowPeak.gz", "GSM4441695_CTRH_CAUD_10_0867.idr.optimal_peak.narrowPeak.gz", "GSM4441682_CTRL_CAUD_15_78.idr.optimal_peak.narrowPeak.gz", "GSM4441694_CTRH_CAUD_08_0712.idr.optimal_peak.narrowPeak.gz", "GSM4441699_CTRH_CAUD_14_1383.optimal_peak.narrowPeak.gz", "GSM4441701_CTRH_CAUD_15_1025.idr.optimal_peak.narrowPeak.gz", "GSM4441689_CTRL_CAUD_14_0941.idr.optimal_peak.narrowPeak.gz", "GSM4441690_CTRL_CAUD_14_1018.optimal_peak.narrowPeak.gz", "GSM4441697_CTRH_CAUD_14_0380.idr.optimal_peak.narrowPeak.gz", "GSM4441688_CTRL_CAUD_14_0586.optimal_peak.narrowPeak.gz", "GSM4441700_CTRH_CAUD_15_1023.optimal_peak.narrowPeak.gz", "GSM4441707_CTRL_CAUD_03_41.optimal_peak.narrowPeak.gz", "GSM4441710_CTRL_CAUD_05_16.optimal_peak.narrowPeak.gz", "GSM4441684_CTRL_CAUD_16_32.optimal_peak.narrowPeak.gz", "GSM4441683_CTRL_CAUD_16_10.idr.optimal_peak.narrowPeak.gz", "GSM4441681_CTRL_CAUD_09_35.optimal_peak.narrowPeak.gz", "GSM4441698_CTRH_CAUD_14_0513.idr.optimal_peak.narrowPeak.gz", "GSM4441705_CTRL_CAUD_09_1589.optimal_peak.narrowPeak.gz", "GSM4441683_CTRL_CAUD_16_10.optimal_peak.narrowPeak.gz", "GSM4441710_CTRL_CAUD_05_16.idr.optimal_peak.narrowPeak.gz", "GSM4441693_CTRH_CAUD_07_1287.idr.optimal_peak.narrowPeak.gz", "GSM4441687_CTRL_CAUD_13_1226.optimal_peak.narrowPeak.gz", "GSM4441701_CTRH_CAUD_15_1025.optimal_peak.narrowPeak.gz", "GSM4441680_CTRL_CAUD_00_38.idr.optimal_peak.narrowPeak.gz", "GSM4441703_CTRL_CAUD_06_0615.idr.optimal_peak.narrowPeak.gz", "GSM4441680_CTRL_CAUD_00_38.optimal_peak.narrowPeak.gz", "GSM4441703_CTRL_CAUD_06_0615.optimal_peak.narrowPeak.gz", "GSM4441687_CTRL_CAUD_13_1226.idr.optimal_peak.narrowPeak.gz", "GSM4441691_CTRL_CAUD_01_31.idr.optimal_peak.narrowPeak.gz", "GSM4441686_CTRL_CAUD_13_0038.idr.optimal_peak.narrowPeak.gz"], "Primary brain samples acquired post-mortem, Hippocampus": ["GSM4441719_CTRL_HIPP_14_0586.optimal_peak.narrowPeak.gz", "GSM4441732_CTRH_HIPP_14_0513.optimal_peak.narrowPeak.gz", "GSM4441724_CTRH_HIPP_07_1144.idr.optimal_peak.narrowPeak.gz", "GSM4441726_CTRH_HIPP_08_0298.optimal_peak.narrowPeak.gz", "GSM4441716_CTRL_HIPP_11_0393.optimal_peak.narrowPeak.gz", "GSM4441713_CTRH_HIPP_15_1023.idr.optimal_peak.narrowPeak.gz", "GSM4441717_CTRL_HIPP_13_0038.optimal_peak.narrowPeak.gz", "GSM4441724_CTRH_HIPP_07_1144.optimal_peak.narrowPeak.gz", "GSM4441728_CTRL_HIPP_09_35.optimal_peak.narrowPeak.gz", "GSM4441716_CTRL_HIPP_11_0393.idr.optimal_peak.narrowPeak.gz", "GSM4441730_CTRH_HIPP_13_0962.optimal_peak.narrowPeak.gz", "GSM4441733_CTRH_HIPP_14_1383.optimal_peak.narrowPeak.gz", "GSM4441720_CTRL_HIPP_14_0941.optimal_peak.narrowPeak.gz", "GSM4441730_CTRH_HIPP_13_0962.idr.optimal_peak.narrowPeak.gz", "GSM4441727_CTRL_HIPP_05_16.optimal_peak.narrowPeak.gz", "GSM4441722_CTRH_HIPP_07_1058.idr.optimal_peak.narrowPeak.gz", "GSM4441715_CTRL_HIPP_06_1516.optimal_peak.narrowPeak.gz", "GSM4441723_CTRL_HIPP_04_38.optimal_peak.narrowPeak.gz", "GSM4441715_CTRL_HIPP_06_1516.idr.optimal_peak.narrowPeak.gz", "GSM4441719_CTRL_HIPP_14_0586.idr.optimal_peak.narrowPeak.gz", "GSM4441721_CTRL_HIPP_14_1018.optimal_peak.narrowPeak.gz", "GSM4441725_CTRH_HIPP_07_1287.optimal_peak.narrowPeak.gz", "GSM4441733_CTRH_HIPP_14_1383.idr.optimal_peak.narrowPeak.gz", "GSM4441732_CTRH_HIPP_14_0513.idr.optimal_peak.narrowPeak.gz", "GSM4441725_CTRH_HIPP_07_1287.idr.optimal_peak.narrowPeak.gz", "GSM4441718_CTRL_HIPP_13_1226.optimal_peak.narrowPeak.gz", "GSM4441727_CTRL_HIPP_05_16.idr.optimal_peak.narrowPeak.gz", "GSM4441718_CTRL_HIPP_13_1226.idr.optimal_peak.narrowPeak.gz", "GSM4441717_CTRL_HIPP_13_0038.idr.optimal_peak.narrowPeak.gz", "GSM4441714_CTRH_HIPP_15_1025.optimal_peak.narrowPeak.gz", "GSM4441728_CTRL_HIPP_09_35.idr.optimal_peak.narrowPeak.gz", "GSM4441714_CTRH_HIPP_15_1025.idr.optimal_peak.narrowPeak.gz", "GSM4441729_CTRH_HIPP_10_0867.optimal_peak.narrowPeak.gz", "GSM4441723_CTRL_HIPP_04_38.idr.optimal_peak.narrowPeak.gz", "GSM4441720_CTRL_HIPP_14_0941.idr.optimal_peak.narrowPeak.gz", "GSM4441713_CTRH_HIPP_15_1023.optimal_peak.narrowPeak.gz", "GSM4441729_CTRH_HIPP_10_0867.idr.optimal_peak.narrowPeak.gz", "GSM4441712_CTRL_HIPP_00_38.idr.optimal_peak.narrowPeak.gz", "GSM4441731_CTRH_HIPP_14_0380.idr.optimal_peak.narrowPeak.gz", "GSM4441721_CTRL_HIPP_14_1018.idr.optimal_peak.narrowPeak.gz", "GSM4441712_CTRL_HIPP_00_38.optimal_peak.narrowPeak.gz", "GSM4441726_CTRH_HIPP_08_0298.idr.optimal_peak.narrowPeak.gz", "GSM4441731_CTRH_HIPP_14_0380.optimal_peak.narrowPeak.gz", "GSM4441722_CTRH_HIPP_07_1058.optimal_peak.narrowPeak.gz"], "Primary brain samples acquired post-mortem, Middle Frontal Gyrus": ["GSM4441736_CTRL_MDFG_16_10.idr.optimal_peak.narrowPeak.gz", "GSM4441739_CTRL_MDFG_03_39.optimal_peak.narrowPeak.gz", "GSM4441738_CTRL_MDFG_01_37.optimal_peak.narrowPeak.gz", "GSM4441744_CTRL_MDFG_09_35.idr.optimal_peak.narrowPeak.gz", "GSM4441734_CTRL_MDFG_00_38.idr.optimal_peak.narrowPeak.gz", "GSM4441737_CTRL_MDFG_16_32.idr.optimal_peak.narrowPeak.gz", "GSM4441741_CTRL_MDFG_03_66.optimal_peak.narrowPeak.gz", "GSM4441742_CTRL_MDFG_04_38.optimal_peak.narrowPeak.gz", "GSM4441743_CTRL_MDFG_05_16.optimal_peak.narrowPeak.gz", "GSM4441739_CTRL_MDFG_03_39.idr.optimal_peak.narrowPeak.gz", "GSM4441740_CTRL_MDFG_03_41.optimal_peak.narrowPeak.gz", "GSM4441734_CTRL_MDFG_00_38.optimal_peak.narrowPeak.gz", "GSM4441735_CTRL_MDFG_15_78.idr.optimal_peak.narrowPeak.gz", "GSM4441743_CTRL_MDFG_05_16.idr.optimal_peak.narrowPeak.gz", "GSM4441745_CTRL_MDFG_09_50.idr.optimal_peak.narrowPeak.gz", "GSM4441736_CTRL_MDFG_16_10.optimal_peak.narrowPeak.gz", "GSM4441735_CTRL_MDFG_15_78.optimal_peak.narrowPeak.gz", "GSM4441738_CTRL_MDFG_01_37.idr.optimal_peak.narrowPeak.gz", "GSM4441742_CTRL_MDFG_04_38.idr.optimal_peak.narrowPeak.gz", "GSM4441741_CTRL_MDFG_03_66.idr.optimal_peak.narrowPeak.gz", "GSM4441737_CTRL_MDFG_16_32.optimal_peak.narrowPeak.gz", "GSM4441745_CTRL_MDFG_09_50.optimal_peak.narrowPeak.gz", "GSM4441744_CTRL_MDFG_09_35.optimal_peak.narrowPeak.gz", "GSM4441740_CTRL_MDFG_03_41.idr.optimal_peak.narrowPeak.gz"], "Primary brain samples acquired post-mortem, Middle Temporal Gyri": ["GSM4441750_CTRL_MDTG_03_15.idr.optimal_peak.narrowPeak.gz", "GSM4441749_CTRL_MDTG_16_32.idr.optimal_peak.narrowPeak.gz", "GSM4441752_CTRL_MDTG_03_41.optimal_peak.narrowPeak.gz", "GSM4441748_CTRL_MDTG_16_10.idr.optimal_peak.narrowPeak.gz", "GSM4441757_CTRL_MDTG_09_50.optimal_peak.narrowPeak.gz", "GSM4441753_CTRL_MDTG_03_66.optimal_peak.narrowPeak.gz", "GSM4441753_CTRL_MDTG_03_66.idr.optimal_peak.narrowPeak.gz", "GSM4441748_CTRL_MDTG_16_10.optimal_peak.narrowPeak.gz", "GSM4441755_CTRL_MDTG_05_16.optimal_peak.narrowPeak.gz", "GSM4441747_CTRL_MDTG_15_78.idr.optimal_peak.narrowPeak.gz", "GSM4441754_CTRL_MDTG_04_38.optimal_peak.narrowPeak.gz", "GSM4441751_CTRL_MDTG_03_39.optimal_peak.narrowPeak.gz", "GSM4441756_CTRL_MDTG_09_35.optimal_peak.narrowPeak.gz", "GSM4441756_CTRL_MDTG_09_35.idr.optimal_peak.narrowPeak.gz", "GSM4441746_CTRL_MDTG_00_38.optimal_peak.narrowPeak.gz", "GSM4441755_CTRL_MDTG_05_16.idr.optimal_peak.narrowPeak.gz", "GSM4441749_CTRL_MDTG_16_32.optimal_peak.narrowPeak.gz", "GSM4441751_CTRL_MDTG_03_39.idr.optimal_peak.narrowPeak.gz", "GSM4441750_CTRL_MDTG_03_15.optimal_peak.narrowPeak.gz", "GSM4441752_CTRL_MDTG_03_41.idr.optimal_peak.narrowPeak.gz", "GSM4441747_CTRL_MDTG_15_78.optimal_peak.narrowPeak.gz", "GSM4441754_CTRL_MDTG_04_38.idr.optimal_peak.narrowPeak.gz", "GSM4441746_CTRL_MDTG_00_38.idr.optimal_peak.narrowPeak.gz", "GSM4441757_CTRL_MDTG_09_50.idr.optimal_peak.narrowPeak.gz"], "Primary brain samples acquired post-mortem, Parietal Lobe": ["GSM4441764_CTRL_PARL_13_0038.optimal_peak.narrowPeak.gz", "GSM4441769_CTRH_PARL_07_1287.optimal_peak.narrowPeak.gz", "GSM4441759_CTRH_PARL_15_1023.optimal_peak.narrowPeak.gz", "GSM4441761_CTRL_PARL_09_1589.idr.optimal_peak.narrowPeak.gz", "GSM4441767_CTRL_PARL_14_1018.idr.optimal_peak.narrowPeak.gz", "GSM4441772_CTRH_PARL_13_0962.optimal_peak.narrowPeak.gz", "GSM4441775_CTRH_PARL_14_1383.optimal_peak.narrowPeak.gz", "GSM4441765_CTRL_PARL_13_1226.idr.optimal_peak.narrowPeak.gz", "GSM4441760_CTRH_PARL_15_1025.idr.optimal_peak.narrowPeak.gz", "GSM4441768_CTRH_PARL_07_1144.optimal_peak.narrowPeak.gz", "GSM4441767_CTRL_PARL_14_1018.optimal_peak.narrowPeak.gz", "GSM4441769_CTRH_PARL_07_1287.idr.optimal_peak.narrowPeak.gz", "GSM4441772_CTRH_PARL_13_0962.idr.optimal_peak.narrowPeak.gz", "GSM4441774_CTRH_PARL_14_0513.idr.optimal_peak.narrowPeak.gz", "GSM4441762_CTRL_PARL_11_0311.optimal_peak.narrowPeak.gz", "GSM4441766_CTRL_PARL_14_0586.optimal_peak.narrowPeak.gz", "GSM4441770_CTRH_PARL_08_0298.optimal_peak.narrowPeak.gz", "GSM4441768_CTRH_PARL_07_1144.idr.optimal_peak.narrowPeak.gz", "GSM4441770_CTRH_PARL_08_0298.idr.optimal_peak.narrowPeak.gz", "GSM4441773_CTRH_PARL_14_0380.optimal_peak.narrowPeak.gz", "GSM4441771_CTRH_PARL_10_0867.optimal_peak.narrowPeak.gz", "GSM4441764_CTRL_PARL_13_0038.idr.optimal_peak.narrowPeak.gz", "GSM4441766_CTRL_PARL_14_0586.idr.optimal_peak.narrowPeak.gz", "GSM4441773_CTRH_PARL_14_0380.idr.optimal_peak.narrowPeak.gz", "GSM4441760_CTRH_PARL_15_1025.optimal_peak.narrowPeak.gz", "GSM4441771_CTRH_PARL_10_0867.idr.optimal_peak.narrowPeak.gz", "GSM4441765_CTRL_PARL_13_1226.optimal_peak.narrowPeak.gz", "GSM4441763_CTRL_PARL_11_0393.optimal_peak.narrowPeak.gz", "GSM4441774_CTRH_PARL_14_0513.optimal_peak.narrowPeak.gz", "GSM4441775_CTRH_PARL_14_1383.idr.optimal_peak.narrowPeak.gz", "GSM4441763_CTRL_PARL_11_0393.idr.optimal_peak.narrowPeak.gz", "GSM4441761_CTRL_PARL_09_1589.optimal_peak.narrowPeak.gz", "GSM4441759_CTRH_PARL_15_1023.idr.optimal_peak.narrowPeak.gz", "GSM4441758_CTRH_PARL_07_1058.optimal_peak.narrowPeak.gz", "GSM4441762_CTRL_PARL_11_0311.idr.optimal_peak.narrowPeak.gz", "GSM4441758_CTRH_PARL_07_1058.idr.optimal_peak.narrowPeak.gz"], "Primary brain samples acquired post-mortem, Putamen": ["GSM4441784_CTRL_PTMN_07_28.idr.optimal_peak.narrowPeak.gz", "GSM4441777_CTRL_PTMN_15_78.idr.optimal_peak.narrowPeak.gz", "GSM4441776_CTRL_PTMN_00_38.optimal_peak.narrowPeak.gz", "GSM4441776_CTRL_PTMN_00_38.idr.optimal_peak.narrowPeak.gz", "GSM4441779_CTRL_PTMN_03_39.optimal_peak.narrowPeak.gz", "GSM4441778_CTRL_PTMN_16_32.idr.optimal_peak.narrowPeak.gz", "GSM4441782_CTRL_PTMN_04_38.idr.optimal_peak.narrowPeak.gz", "GSM4441783_CTRL_PTMN_05_16.optimal_peak.narrowPeak.gz", "GSM4441784_CTRL_PTMN_07_28.optimal_peak.narrowPeak.gz", "GSM4441785_CTRL_PTMN_09_35.idr.optimal_peak.narrowPeak.gz", "GSM4441786_CTRL_PTMN_09_50.idr.optimal_peak.narrowPeak.gz", "GSM4441786_CTRL_PTMN_09_50.optimal_peak.narrowPeak.gz", "GSM4441783_CTRL_PTMN_05_16.idr.optimal_peak.narrowPeak.gz", "GSM4441778_CTRL_PTMN_16_32.optimal_peak.narrowPeak.gz", "GSM4441780_CTRL_PTMN_03_41.optimal_peak.narrowPeak.gz", "GSM4441785_CTRL_PTMN_09_35.optimal_peak.narrowPeak.gz", "GSM4441781_CTRL_PTMN_03_66.idr.optimal_peak.narrowPeak.gz", "GSM4441781_CTRL_PTMN_03_66.optimal_peak.narrowPeak.gz", "GSM4441779_CTRL_PTMN_03_39.idr.optimal_peak.narrowPeak.gz", "GSM4441777_CTRL_PTMN_15_78.optimal_peak.narrowPeak.gz", "GSM4441780_CTRL_PTMN_03_41.idr.optimal_peak.narrowPeak.gz", "GSM4441782_CTRL_PTMN_04_38.optimal_peak.narrowPeak.gz"], "Primary brain samples acquired post-mortem, Substantia Nigra": ["GSM4441790_CTRL_SUNI_09_50.idr.optimal_peak.narrowPeak.gz", "GSM4441790_CTRL_SUNI_09_50.optimal_peak.narrowPeak.gz", "GSM4441795_CTRL_SUNI_03_39.idr.optimal_peak.narrowPeak.gz", "GSM4441793_CTRL_SUNI_01_31.idr.optimal_peak.narrowPeak.gz", "GSM4441798_CTRL_SUNI_04_38.optimal_peak.narrowPeak.gz", "GSM4441793_CTRL_SUNI_01_31.optimal_peak.narrowPeak.gz", "GSM4441787_CTRL_SUNI_00_38.idr.optimal_peak.narrowPeak.gz", "GSM4441788_CTRL_SUNI_07_28.optimal_peak.narrowPeak.gz", "GSM4441787_CTRL_SUNI_00_38.optimal_peak.narrowPeak.gz", "GSM4441796_CTRL_SUNI_03_41.optimal_peak.narrowPeak.gz", "GSM4441789_CTRL_SUNI_09_35.idr.optimal_peak.narrowPeak.gz", "GSM4441794_CTRL_SUNI_03_15.optimal_peak.narrowPeak.gz", "GSM4441797_CTRL_SUNI_03_66.idr.optimal_peak.narrowPeak.gz", "GSM4441792_CTRL_SUNI_16_32.optimal_peak.narrowPeak.gz", "GSM4441791_CTRL_SUNI_15_78.optimal_peak.narrowPeak.gz", "GSM4441795_CTRL_SUNI_03_39.optimal_peak.narrowPeak.gz", "GSM4441797_CTRL_SUNI_03_66.optimal_peak.narrowPeak.gz", "GSM4441788_CTRL_SUNI_07_28.idr.optimal_peak.narrowPeak.gz", "GSM4441791_CTRL_SUNI_15_78.idr.optimal_peak.narrowPeak.gz", "GSM4441800_CTRL_SUNI_06_57.optimal_peak.narrowPeak.gz", "GSM4441800_CTRL_SUNI_06_57.idr.optimal_peak.narrowPeak.gz", "GSM4441799_CTRL_SUNI_05_16.idr.optimal_peak.narrowPeak.gz", "GSM4441789_CTRL_SUNI_09_35.optimal_peak.narrowPeak.gz", "GSM4441796_CTRL_SUNI_03_41.idr.optimal_peak.narrowPeak.gz", "GSM4441799_CTRL_SUNI_05_16.optimal_peak.narrowPeak.gz", "GSM4441792_CTRL_SUNI_16_32.idr.optimal_peak.narrowPeak.gz", "GSM4441794_CTRL_SUNI_03_15.idr.optimal_peak.narrowPeak.gz", "GSM4441798_CTRL_SUNI_04_38.idr.optimal_peak.narrowPeak.gz"], "Primary brain samples acquired post-mortem, Superior Temporal Gyri": ["GSM4441812_CTRH_SMTG_07_1144.optimal_peak.narrowPeak.gz", "GSM4441803_CTRH_SMTG_15_1025.idr.optimal_peak.narrowPeak.gz", "GSM4441806_CTRL_SMTG_11_0311.optimal_peak.narrowPeak.gz", "GSM4441803_CTRH_SMTG_15_1025.optimal_peak.narrowPeak.gz", "GSM4441810_CTRL_SMTG_14_0586.optimal_peak.narrowPeak.gz", "GSM4441814_CTRH_SMTG_08_0712.optimal_peak.narrowPeak.gz", "GSM4441819_CTRH_SMTG_14_1383.optimal_peak.narrowPeak.gz", "GSM4441809_CTRL_SMTG_13_1226.optimal_peak.narrowPeak.gz", "GSM4441817_CTRH_SMTG_14_0380.idr.optimal_peak.narrowPeak.gz", "GSM4441807_CTRL_SMTG_11_0393.idr.optimal_peak.narrowPeak.gz", "GSM4441810_CTRL_SMTG_14_0586.idr.optimal_peak.narrowPeak.gz", "GSM4441809_CTRL_SMTG_13_1226.idr.optimal_peak.narrowPeak.gz", "GSM4441817_CTRH_SMTG_14_0380.optimal_peak.narrowPeak.gz", "GSM4441804_CTRL_SMTG_06_1516.idr.optimal_peak.narrowPeak.gz", "GSM4441815_CTRH_SMTG_10_0867.optimal_peak.narrowPeak.gz", "GSM4441812_CTRH_SMTG_07_1144.idr.optimal_peak.narrowPeak.gz", "GSM4441816_CTRH_SMTG_13_0962.idr.optimal_peak.narrowPeak.gz", "GSM4441811_CTRL_SMTG_14_1018.idr.optimal_peak.narrowPeak.gz", "GSM4441816_CTRH_SMTG_13_0962.optimal_peak.narrowPeak.gz", "GSM4441804_CTRL_SMTG_06_1516.optimal_peak.narrowPeak.gz", "GSM4441802_CTRH_SMTG_15_1023.optimal_peak.narrowPeak.gz", "GSM4441818_CTRH_SMTG_14_0513.optimal_peak.narrowPeak.gz", "GSM4441814_CTRH_SMTG_08_0712.idr.optimal_peak.narrowPeak.gz", "GSM4441818_CTRH_SMTG_14_0513.idr.optimal_peak.narrowPeak.gz", "GSM4441819_CTRH_SMTG_14_1383.idr.optimal_peak.narrowPeak.gz", "GSM4441807_CTRL_SMTG_11_0393.optimal_peak.narrowPeak.gz", "GSM4441811_CTRL_SMTG_14_1018.optimal_peak.narrowPeak.gz", "GSM4441806_CTRL_SMTG_11_0311.idr.optimal_peak.narrowPeak.gz", "GSM4441801_CTRH_SMTG_07_1058.optimal_peak.narrowPeak.gz", "GSM4441815_CTRH_SMTG_10_0867.idr.optimal_peak.narrowPeak.gz", "GSM4441802_CTRH_SMTG_15_1023.idr.optimal_peak.narrowPeak.gz", "GSM4441813_CTRH_SMTG_07_1287.optimal_peak.narrowPeak.gz", "GSM4441808_CTRL_SMTG_13_0038.optimal_peak.narrowPeak.gz", "GSM4441813_CTRH_SMTG_07_1287.idr.optimal_peak.narrowPeak.gz", "GSM4441805_CTRL_SMTG_09_1589.optimal_peak.narrowPeak.gz", "GSM4441805_CTRL_SMTG_09_1589.idr.optimal_peak.narrowPeak.gz", "GSM4441801_CTRH_SMTG_07_1058.idr.optimal_peak.narrowPeak.gz", "GSM4441808_CTRL_SMTG_13_0038.idr.optimal_peak.narrowPeak.gz"], "CD34+ thymic subpopulation": ["GSM4083593_TH137_CD34_RUNX1.bed.gz"], "thymus": ["GSM4083597_TH125_LC_H3K27ac.bed.gz", "GSM4083599_TH125_LC_H3K36me3.bed.gz", "GSM4083594_TH125_EC_H3K27ac.bed.gz", "GSM4083598_TH117_LC_H3K27me3.bed.gz", "GSM4083596_TH125_LC_H3K4me1.bed.gz", "GSM4083600_TH125_SP4_H3K27ac.bed.gz", "GSM4083595_TH125_EC_H3K27me3.bed.gz"], "CD34+1a-7+ thymic subpopulation": ["GSM4083601_TH148_CD34pos_1aneg_7pos.bed.gz", "GSM4083602_TH149_CD34pos_1aneg_7pos.bed.gz"], "CD34+1a+ thymic subpopulation": ["GSM4083604_TH149_CD34pos_1apos.bed.gz", "GSM4083603_TH148_CD34pos_1apos.bed.gz"], "early cortical thymic subpopulation": ["GSM4083606_TH149_EC.bed.gz", "GSM4083605_TH148_EC.bed.gz"], "late cortical thymic subpopulation": ["GSM4083607_TH148_LC.bed.gz", "GSM4083608_TH149_LC.bed.gz"], "MCF7 cells": ["GSM4520696_REP1_10NAC_10Gy.clean.umi_dedup.aggregated.bed.gz", "GSM4520695_REP1_10NAC_0Gy.clean.umi_dedup.aggregated.bed.gz", "GSM3417007_AsoCaptureSeq_MCF7_antisense_peaks.bed.gz", "GSM4520699_REP2_10NAC_0Gy.clean.umi_dedup.aggregated.bed.gz", "GSM4520702_REP3_0NAC_10Gy.clean.umi_dedup.aggregated.bed.gz", "GSM4520694_REP1_0NAC_10Gy.clean.umi_dedup.aggregated.bed.gz", "GSM3417008_AsoCaptureSeq_MCF7_sense_peaks.bed.gz", "GSM4520701_REP3_0NAC_0Gy.clean.umi_dedup.aggregated.bed.gz", "GSM4520698_REP2_0NAC_10Gy.clean.umi_dedup.aggregated.bed.gz", "GSM4520693_REP1_0NAC_0Gy.clean.umi_dedup.aggregated.bed.gz", "GSM4520700_REP2_10NAC_10Gy.clean.umi_dedup.aggregated.bed.gz", "GSM4520697_REP2_0NAC_0Gy.clean.umi_dedup.aggregated.bed.gz"], "Bru-seq data": ["GSM4644417_HC_Bruseq.fragmentspergene.counts.bed.gz", "GSM4644418_DMD_Bruseq.fragmentspergene.counts.bed.gz"], "Hela cells": ["GSM4411213_DS70816_peaks_fdr05.bed.gz", "GSM4411214_DS70817_peaks_fdr05.bed.gz"], "MCF-7 cells": ["GSM4625586_11-TGFb-and-RA-high-rep1_blacklistFiltered.narrowPeak.gz", "GSM4625604_29-TGFb-and-RA-low-rep3_blacklistFiltered.narrowPeak.gz", "GSM4625584_09-TGFb-and-RA-med-rep1_blacklistFiltered.narrowPeak.gz", "GSM4625608_33-TGFb-low-rep3_blacklistFiltered.narrowPeak.gz", "GSM4625592_17-RA-med-rep2_blacklistFiltered.narrowPeak.gz", "GSM4625576_01-TGFb-low-rep1_blacklistFiltered.narrowPeak.gz", "GSM4625577_02-TGFb-med-rep1_blacklistFiltered.narrowPeak.gz", "GSM4625596_21-TGFb-and-RA-high-rep2_blacklistFiltered.narrowPeak.gz", "GSM4625580_05-EtOH-nlDensity-rep1_blacklistFiltered.narrowPeak.gz", "GSM4625601_26-RA-med-rep3_blacklistFiltered.narrowPeak.gz", "GSM4625579_04-EtOH-highDensity-rep1_blacklistFiltered.narrowPeak.gz", "GSM4625598_23-RA-high-rep2_blacklistFiltered.narrowPeak.gz", "GSM4625610_35-TGFb-and-RA-high-rep3_blacklistFiltered.narrowPeak.gz", "GSM4625611_36-RA-low-rep3_blacklistFiltered.narrowPeak.gz", "GSM4625585_10-TGFb-high-rep1_blacklistFiltered.narrowPeak.gz", "GSM4625597_22-TGFb-high-rep2_blacklistFiltered.narrowPeak.gz", "GSM4625583_08-TGFb-and-RA-low-rep1_blacklistFiltered.narrowPeak.gz", "GSM4625589_14-EtOH-highDensity-rep2_blacklistFiltered.narrowPeak.gz", "GSM4625590_15-EtOH-nlDensity-rep2_blacklistFiltered.narrowPeak.gz", "GSM4625607_32-RA-high-rep3_blacklistFiltered.narrowPeak.gz", "GSM4625582_07-EtOH-halfDensity-rep1_blacklistFiltered.narrowPeak.gz", "GSM4625593_18-TGFb-and-RA-med-rep2_blacklistFiltered.narrowPeak.gz", "GSM4625578_03-RA-low-rep1_blacklistFiltered.narrowPeak.gz", "GSM4625599_24-RA-low-rep2_blacklistFiltered.narrowPeak.gz", "GSM4625605_30-TGFb-med-rep3_blacklistFiltered.narrowPeak.gz", "GSM4625603_28-TGFb-and-RA-med-rep3_blacklistFiltered.narrowPeak.gz", "GSM4625591_16-TGFb-med-rep2_blacklistFiltered.narrowPeak.gz", "GSM4625600_25-EtOH-halfDensity-rep3_blacklistFiltered.narrowPeak.gz", "GSM4625587_12-RA-med-rep1_blacklistFiltered.narrowPeak.gz", "GSM4625594_19-TGFb-low-rep2_blacklistFiltered.narrowPeak.gz", "GSM4625606_31-TGFb-high-rep3_blacklistFiltered.narrowPeak.gz", "GSM4625581_06-RA-high-rep1_blacklistFiltered.narrowPeak.gz", "GSM4625602_27-EtOH-nlDensity-rep3_blacklistFiltered.narrowPeak.gz", "GSM4625609_34-EtOH-highDensity-rep3_blacklistFiltered.narrowPeak.gz", "GSM4625595_20-EtOH-halfDensity-rep2_blacklistFiltered.narrowPeak.gz", "GSM4625588_13-TGFb-and-RA-low-rep2_blacklistFiltered.narrowPeak.gz"], "hESCs H9 cells": ["GSM4134962_ChIPseq_3-ARID1A-mm_S3_vs7Input_MACS2_q1e_2.narrowPeak.gz"], "Toledo_H3K27ac_CARM1i": ["GSM4623068_C1_H3K27ac.peaks.bed.gz", "GSM4623071_C3_H3K27ac.peaks.bed.gz"], "Toledo_H3K4me1_CARM1i": ["GSM4623072_C3_H3K4me1.peaks.bed.gz", "GSM4623069_C1_H3K4me1.peaks.bed.gz"], "Toledo_H3K4me3_CARM1i": ["GSM4623073_C3_H3K4me3.peaks.bed.gz", "GSM4623070_C1_H3K4me3.peaks.bed.gz"], "Toledo_H3K27ac_DMSO": ["GSM4623074_D1_H3K27ac.peaks.bed.gz", "GSM4623077_D2_H3K27ac.peaks.bed.gz"], "Toledo_H3K4me1_DMSO": ["GSM4623078_D2_H3K4me1.peaks.bed.gz", "GSM4623075_D1_H3K4me1.peaks.bed.gz"], "Toledo_H3K4me3_DMSO": ["GSM4623076_D1_H3K4me3.peaks.bed.gz", "GSM4623079_D2_H3K4me3.peaks.bed.gz"], "KARPAS-45": ["GSM4591425_KRPS_H3K27ac.bed.gz", "GSM4591424_KRPS_MF_RUNX2_peaks.narrowPeak.gz"], "PER-117": ["GSM4591427_PER2_RUNX2.narrowPeak.gz", "GSM4591428_PER_H3K27ac.bed.gz"], "HaCaT Keratinocyte cells": ["GSM4568361_OnTAD_hacat_stim_all_chr_sorted.bed.gz", "GSM4568374_HaCaT_st_27ac_helen_combinedpeaks.bed.gz", "GSM4568375_HaCaT_unst_27ac_helen_combined_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568374_HaCat_27ac_st_rep1_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568374_HaCaT_st_27ac_helen_combined_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568374_HaCat_27ac_st_rep2_helenpeaks.bed.gz", "GSM4568375_HaCaT_unst_27ac_helen_combinedpeaks.bed.gz", "GSM4568362_OnTAD_hacat_unstim_all_chr_sorted.bed.gz", "GSM4568375_HaCat_27ac_unst_rep1_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568375_HaCat_27ac_unst_rep2_helenpeaks.bed.gz", "GSM4568375_HaCat_27ac_unst_rep1_helenpeaks.bed.gz", "GSM4568375_HaCat_27ac_unst_rep2_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568374_HaCat_27ac_st_rep2_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568374_HaCat_27ac_st_rep1_helenpeaks.bed.gz"], "My-La CD8+ T lymphocyte cells": ["GSM4568376_MyLa_27ac_rep1_helenpeaks.bed.gz", "GSM4568376_MyLa_27ac_rep2_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568376_MyLa_27ac_rep2_helenpeaks.bed.gz", "GSM4568376_MyLa_27ac_helen_combined_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568363_OnTAD_myla_all_chr_sorted.bed.gz", "GSM4568376_MyLa_27ac_rep1_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568376_MyLa_27ac_helen_combinedpeaks.bed.gz"], "MOLM-13": ["GSM4407651_M_shk1_peaks.narrowPeak.gz", "GSM4407650_M_con_peaks.narrowPeak.gz"], "Human lung (carcinoma) cell line": ["GSM3855734_AG15688_LN51259.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855735_AG15689_LN51258.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855737_AG15691_LN51256.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855747_AG15725_LN51271.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855736_AG15690_LN51257.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855723_AG15677_LN51270.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855731_AG15685_LN51262.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855725_AG15679_LN51268.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855724_AG15678_LN51269.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855738_AG15692_LN51255.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855760_AG14260_LN47593.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855766_AG14318_LN47583.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855746_AG15724_LN51272.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855742_AG15720_LN51276.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855740_AG15694_LN51253.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855726_AG15680_LN51267.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855763_AG14263_LN47585.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855764_AG14316_LN47597.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855744_AG15722_LN51274.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855765_AG14317_LN47587.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855761_AG14261_LN47591.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855741_AG15695_LN51252.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855762_AG14262_LN47589.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855728_AG15682_LN51265.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855732_AG15686_LN51261.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855767_AG14345_LN47581.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855758_AG14257_LN47599.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855730_AG15684_LN51263.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855727_AG15681_LN51266.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855733_AG15687_LN51260.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855739_AG15693_LN51254.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855745_AG15723_LN51273.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855743_AG15721_LN51275.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855759_AG14259_LN47595.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855729_AG15683_LN51264.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "HEK293 Flp-In-TReX cells": ["GSM4048170_PureCLIP.crosslinking_sites.MKRN23.bed.gz", "GSM4048168_PureCLIP.crosslinking_sites.MKRN21.bed.gz", "GSM4048169_PureCLIP.crosslinking_sites.MKRN22.bed.gz"], "KBM7 chronic myeloid leukemia cell line": ["GSM4142032_KBM7_H3K4me3.narrowPeak.gz", "GSM4142031_KBM7_H3K27ac.narrowPeak.gz"], "Leukemia cell line": ["GSM4221663_CTCF168-2_peaks.narrowPeak.gz", "GSM4221661_CTCF96-2_peaks.narrowPeak.gz", "GSM4221659_CTCF24-2_peaks.narrowPeak.gz", "GSM4221662_CTCF168-1_peaks.narrowPeak.gz", "GSM4221664_C3_DMSO_24h_peaks.narrowPeak.gz", "GSM4221660_CTCF96-1_peaks.narrowPeak.gz", "GSM4221657_CTCF0-2_peaks.narrowPeak.gz", "GSM4221658_CTCF24-1_peaks.narrowPeak.gz", "GSM4221656_CTCF0-1_peaks.narrowPeak.gz", "GSM4221665_C3_AUX_24h_peaks.narrowPeak.gz"], "Osteosarcoma cell": ["GSM4498738_U2OS_M_phase_plus_Aphidicolin_replicate_3.bed.gz", "GSM4498737_U2OS_M_phase_plus_Aphidicolin_replicate_2.bed.gz", "GSM4498749_U2OS_plus_Aphidicolin_CNV.bed.gz", "GSM4498736_U2OS_M_phase_plus_Aphidicolin_replicate_1.bed.gz"], "HeLa cell": ["GSM4498744_HeLa_M_phase_plus_Aphidicolin.bed.gz"], "Human bronchial epithelial cell": ["GSM4498746_HBE_M_phase_plus_Aphidicolin.bed.gz"], "primary human normal lung fibroblast": ["GSM4110236_ATAC_NLF_rep1.narrowPeak.txt.gz", "GSM4110238_ATAC_NLF_OE_rep1.narrowPeak.txt.gz", "GSM4110237_ATAC_NLF_rep2.narrowPeak.txt.gz", "GSM4110239_ATAC_NLF_OE_rep2.narrowPeak.txt.gz"], "Umbilical cord blood": ["GSM4079461_ATAC_Cord_d16_rep2.bed.gz", "GSM4079460_ATAC_Cord_d16_rep1.bed.gz", "GSM4079458_ATAC_Cord_d12_rep1.bed.gz", "GSM4079462_ATAC_Cord_d8_rep1.bed.gz", "GSM4079457_ATAC_Cord_d10_rep2.bed.gz", "GSM4079456_ATAC_Cord_d10_rep1.bed.gz", "GSM4079459_ATAC_Cord_d12_rep2.bed.gz"], "H1hESC_ChIP_GATA3_6h": ["GSM3999734_H1hESC_GATA3_6h_ChIP_rep1_peaks.bed.gz", "GSM3999736_H1hESC_GATA3_6h_ChIP_rep2_peaks.bed.gz"], "HepG2.2.15 cells": ["GSM4396392_TENT4B_S4.depth.bed.gz", "GSM4396390_NMG_S2.depth.bed.gz", "GSM4396389_Input1ug_S1.depth.bed.gz", "GSM4396391_TENT4A_S3.depth.bed.gz", "GSM4396394_TENT4B_2nd.depth.bed.gz", "GSM4396393_NMG_2nd.depth.bed.gz"], "Control Sample H3K4me3 ChIP-Seq": ["GSM4289313_MACS2_callpeak_on_data_170_and_data_146_broad_Peaks.bed.gz", "GSM4289309_MACS2_callpeak_on_data_170_and_data_138_broad_Peaks.bed.gz", "GSM4289305_MACS2_callpeak_on_data_170_and_data_132_broad_Peaks.bed.gz", "GSM4289314_MACS2_callpeak_on_data_170_and_data_148_broad_Peaks.bed.gz", "GSM4289310_MACS2_callpeak_on_data_170_and_data_140_broad_Peaks.bed.gz", "GSM4289312_MACS2_callpeak_on_data_170_and_data_144_broad_Peaks.bed.gz", "GSM4289315_MACS2_callpeak_on_data_170_and_data_150_broad_Peaks.bed.gz", "GSM4289308_MACS2_callpeak_on_data_170_and_data_136_broad_Peaks.bed.gz", "GSM4289307_MACS2_callpeak_on_data_170_and_data_134_broad_Peaks.bed.gz", "GSM4289311_MACS2_callpeak_on_data_170_and_data_142_broad_Peaks.bed.gz"], "HD Sample H3K4me3 ChIP-Seq": ["GSM4289318_MACS2_callpeak_on_data_170_and_data_158_broad_Peaks.bed.gz", "GSM4289322_MACS2_callpeak_on_data_170_and_data_166_broad_Peaks.bed.gz", "GSM4289320_MACS2_callpeak_on_data_170_and_data_162_broad_Peaks.bed.gz", "GSM4289319_MACS2_callpeak_on_data_170_and_data_160_broad_Peaks.bed.gz", "GSM4289316_MACS2_callpeak_on_data_170_and_data_154_broad_Peaks.bed.gz", "GSM4289321_MACS2_callpeak_on_data_170_and_data_164_broad_Peaks.bed.gz", "GSM4289317_MACS2_callpeak_on_data_170_and_data_156_broad_Peaks.bed.gz"], "medium spiny neuron-like": ["GSM4289915_25iCTR18n2_ATAC_MSN_rep2.fastq.bed.gz", "GSM4289914_25iCTR18n2_ATAC_MSN_rep1.fastq.bed.gz", "GSM4289911_04iHD46n10_ATAC_MSN_rep2.fastq.bed.gz", "GSM4289916_25iCTR18n6_ATAC_MSN_rep1.fastq.bed.gz", "GSM4289910_04iHD46n10_ATAC_MSN_rep1.fastq.bed.gz", "GSM4289913_14iCTR28n6_ATAC_MSN_rep2.fastq.bed.gz", "GSM4289918_83iCTR33n1_ATAC_MSN_rep1.fastq.bed.gz", "GSM4289917_25iCTR18n6_ATAC_MSN_rep2.fastq.bed.gz", "GSM4289909_03iHD53n3_ATAC_MSN_rep2.fastq.bed.gz", "GSM4289919_83iCTR33n1_ATAC_MSN_rep2.fastq.bed.gz", "GSM4289912_14iCTR28n6_ATAC_MSN_rep1.fastq.bed.gz", "GSM4289908_03iHD53n3_ATAC_MSN_rep1.fastq.bed.gz"], "Biliary Epithelial Cells": ["GSM4310212_CPTH6_TGF_beta_3_peaks.bed.gz", "GSM4310203_CPTH6_Vehicle_1_peaks.bed.gz", "GSM4310209_DMSO_Vehicle_3_peaks.bed.gz", "GSM4310210_DMSO_TGF_beta_3_peaks.bed.gz", "GSM4310192_Vehicle_2_K9ac_peaks.bed.gz", "GSM4310201_DMSO_Vehicle_1_peaks.bed.gz", "GSM4310204_CPTH6_TGF_beta_1_peaks.bed.gz", "GSM4310206_DMSO_TGF_beta_2_peaks.bed.gz", "GSM4310191_Vehicle_2_K27ac_peaks.bed.gz", "GSM4310208_CPTH6_TGF_beta_2_peaks.bed.gz", "GSM4310202_DMSO_TGF_beta_1_peaks.bed.gz", "GSM4310195_H69_5Vehicle_3_SMAD3_peaks.bed.gz", "GSM4310197_H69_4TGF_beta_3_SMAD3_peaks.bed.gz", "GSM4310198_H69_5TGF_beta_3_SMAD3_peaks.bed.gz", "GSM4310186_TGF_beta_2_K27ac_peaks.bed.gz", "GSM4310207_CPTH6_Vehicle_2_peaks.bed.gz", "GSM4310187_TGF_beta_2_K9ac_peaks.bed.gz", "GSM4310184_TGF_beta_1_K27ac_peaks.bed.gz", "GSM4310189_Vehicle_1_K27ac_peaks.bed.gz", "GSM4310185_TGF_beta_1_K9ac_peaks.bed.gz", "GSM4310190_Vehicle_1_K9ac_peaks.bed.gz", "GSM4310211_CPTH6_Vehicle_3_peaks.bed.gz", "GSM4310205_DMSO_Vehicle_2_peaks.bed.gz", "GSM4310194_H69_4Vehicle_3_SMAD3_peaks.bed.gz"], "MKL-1 MCC Cells": ["GSM4172937_LSD1i-2.bed.gz", "GSM4172936_LSD1i-1.bed.gz", "GSM4172940_Combo-1.bed.gz", "GSM4172934_Control-1.bed.gz", "GSM4172938_dBRD9-1.bed.gz", "GSM4172935_Control-2.bed.gz", "GSM4172941_Combo-2.bed.gz", "GSM4172939_dBRD9-2.bed.gz"], "96h DMSO activated CD3+": ["GSM4210411_CD3.T.cells_DMSO_3.narrowPeak.gz", "GSM4210410_CD3.T.cells_DMSO_2.narrowPeak.gz", "GSM4210409_CD3.T.cells_DMSO_1.narrowPeak.gz"], "96h PF-9927 activated CD3+": ["GSM4210413_CD3.T.cells_9927_2.narrowPeak.gz", "GSM4210414_CD3.T.cells_9927_3.narrowPeak.gz", "GSM4210412_CD3.T.cells_9927_1.narrowPeak.gz"], "HEC-1-A": ["GSM4174099_METTL3_Control_MeRIP_r1_peaks.narrowPeak.gz", "GSM4174101_METTL3_KD_MeRIP_r1_peaks.narrowPeak.gz", "GSM4174102_METTL3_KD_MeRIP_r2_peaks.narrowPeak.gz", "GSM4174100_METTL3_Control_MeRIP_r2_peaks.narrowPeak.gz"], "forebrain spheroid": ["GSM3896956_121_ipsc_0_8858.1.narrowPeak.gz", "GSM3896975_180_glial_588_2242.1_hCS.narrowPeak.gz", "GSM3896986_203_glial_532_8858.1_hCS.narrowPeak.gz", "GSM3896959_124_ipsc_0_8858.1.narrowPeak.gz", "GSM3896974_179_glial_588_2242.1_hCS.narrowPeak.gz", "GSM3896948_112_whole_25_8858.1_hCS.narrowPeak.gz", "GSM3896928_053_neuronal_434_2242.1_hCS.narrowPeak.gz", "GSM3896967_168_glial_114_2242.1_hCS.narrowPeak.gz", "GSM3896902_002_neuronal_371_8858.1_hCS.narrowPeak.gz", "GSM3896931_056_neuronal_79_2242.1_hCS.narrowPeak.gz", "GSM3896983_198_glial_532_2242.1_hCS.narrowPeak.gz", "GSM3896994_215_glial_394_2242.1_hSS.narrowPeak.gz", "GSM3896997_220_neuronal_220_8858.1_hCS.narrowPeak.gz", "GSM3896965_166_neuronal_114_2242.1_hCS.narrowPeak.gz", "GSM3896949_113_whole_25_8858.1_hCS.narrowPeak.gz", "GSM3897037_300_whole_33_H20_hCS.narrowPeak.gz", "GSM3896917_036_neuronal_188_1205.4_hCS.narrowPeak.gz", "GSM3897011_273_neuronal_206_1205.4_hCS.narrowPeak.gz", "GSM3896923_042_neuronal_104_2242.1_hSS.narrowPeak.gz", "GSM3897038_301_whole_33_H21_hCS.narrowPeak.gz", "GSM3896952_117_ipsc_0_2242.1.narrowPeak.gz", "GSM3896977_190_neuronal_595_6593.8_hCS.narrowPeak.gz", "GSM3896943_107_whole_25_2242.1_hCS.narrowPeak.gz", "GSM3896905_005_neuronal_79_8858.1_hCS.narrowPeak.gz", "GSM3896910_027_glial_230_8858.1_hCS.narrowPeak.gz", "GSM3896918_037_glial_104_8858.1_hCS.narrowPeak.gz", "GSM3896922_041_neuronal_104_8858.1_hCS.narrowPeak.gz", "GSM3897016_278_whole_46_8858.1_hCS.narrowPeak.gz", "GSM3897028_291_whole_42_8858.1_hCS.narrowPeak.gz", "GSM3896920_039_glial_104_8858.1_hSS.narrowPeak.gz", "GSM3896991_210_glial_394_2242.1_hCS.narrowPeak.gz", "GSM3897031_294_whole_42_2242.1_hCS.narrowPeak.gz", "GSM3896962_161_glial_491_6593.8_hCS.narrowPeak.gz", "GSM3896984_201_neuronal_532_8858.1_hCS.narrowPeak.gz", "GSM3896903_003_neuronal_371_8858.1_hSS.narrowPeak.gz", "GSM3897015_277_whole_46_0524.1_hCS.narrowPeak.gz", "GSM3896966_167_glial_114_2242.1_hCS.narrowPeak.gz", "GSM3896969_172_neuronal_107_2242.1_hSS.narrowPeak.gz", "GSM3897025_288_neuronal_125_8858.1_hSS.narrowPeak.gz", "GSM3896963_162_glial_491_6593.8_hCS.narrowPeak.gz", "GSM3896916_035_neuronal_104_2242.1_hCS.narrowPeak.gz", "GSM3896978_191_glial_595_6593.8_hCS.narrowPeak.gz", "GSM3896904_004_neuronal_79_2242.1_hSS.narrowPeak.gz", "GSM3896947_111_whole_25_8858.1_hCS.narrowPeak.gz", "GSM3897012_274_neuronal_206_8858.1_hCS.narrowPeak.gz", "GSM3896907_010_glial_79_2242.1_hSS.narrowPeak.gz", "GSM3896954_119_ipsc_0_2242.1.narrowPeak.gz", "GSM3896927_052_neuronal_371_2242.1_hCS.narrowPeak.gz", "GSM3897033_296_whole_27_8858.1_hCS.narrowPeak.gz", "GSM3896914_033_neuronal_230_2242.1_hSS.narrowPeak.gz", "GSM3896909_026_glial_230_2242.1_hCS.narrowPeak.gz", "GSM3896913_032_neuronal_230_8858.1_hCS.narrowPeak.gz", "GSM3897030_293_whole_42_2242.1_hCS.narrowPeak.gz", "GSM3896961_130_ipsc_0_8858.1.narrowPeak.gz", "GSM3896995_216_glial_394_2242.1_hSS.narrowPeak.gz", "GSM3896979_192_glial_595_6593.8_hCS.narrowPeak.gz", "GSM3896982_197_glial_532_2242.1_hCS.narrowPeak.gz", "GSM3897013_275_glial_206_1205.4_hCS.narrowPeak.gz", "GSM3896998_221_glial_220_8858.1_hCS.narrowPeak.gz", 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"GSM3692165_2017011_olig2_peaks.narrowPeak.gz", "GSM3692177_c13-thra1_peaks.narrowPeak.gz", "GSM3692155_2017014_atf4_peaks.narrowPeak.gz", "GSM3692168_2017039-olig2_peaks.narrowPeak.gz", "GSM3692167_2017025-olig2_peaks.narrowPeak.gz", "GSM3692169_201704_olig2_peaks.narrowPeak.gz", "GSM3692185_aD16.2_peaks.broadPeak.gz", "GSM3692172_20180807-thra1_peaks.narrowPeak.gz", "GSM3692157_2017039-atf4_peaks.narrowPeak.gz", "GSM3692152_2016029_atf4_peaks.narrowPeak.gz", "GSM3692190_C13.2_peaks.broadPeak.gz", "GSM3692193_C25.2_peaks.broadPeak.gz", "GSM3692175_ad1-thra1_peaks.narrowPeak.gz", "GSM3692191_C13B.2_peaks.broadPeak.gz", "GSM3692153_2017001_atf4_peaks.narrowPeak.gz", "GSM3692178_c23-thra1_peaks.narrowPeak.gz", "GSM3692159_2018001-atf4_peaks.narrowPeak.gz", "GSM3692150_20138_atf4_peaks.narrowPeak.gz"], "iPSC myotube-DMSO": ["GSM3744437_03_day2_m2_summits.bed.gz", "GSM3744436_02_day2_m2_summits.bed.gz", "GSM3744435_01_day2_m2_summits.bed.gz"], "iPSC myotube-SDDF": ["GSM3744440_06_day2_m2_summits.bed.gz", "GSM3744438_04_day2_m2_summits.bed.gz", "GSM3744439_05_day2_m2_summits.bed.gz"], "GIST-T1 cell line": ["GSM3376521_t1_cellline_CTCF_t11_fp-stylefactor_hg38.bed.gz"], "GIST KIT1": ["GSM3376527_KIT1_H3K27ac_102_fp-stylesuper-L0_hg38.bed.gz", "GSM3376526_KIT1_CTCF_101_fp-stylefactor_hg38.bed.gz", "GSM3376527_KIT1_H3K27ac_102_fp-stylehistone_hg38.bed.gz"], "GIST KIT2": ["GSM3376530_KIT2_CTCF_271_fp-stylefactor_hg38.bed.gz", "GSM3376531_KIT2_H3K27ac_2722_fp-stylesuper-L0_hg38.bed.gz", "GSM3376531_KIT2_H3K27ac_2722_fp-stylehistone_hg38.bed.gz"], "GIST KIT3": ["GSM3376534_KIT3_CTCF_451_fp-stylefactor_hg38.bed.gz", "GSM3376535_KIT3_H3K27ac_452_fp-stylehistone_hg38.bed.gz", "GSM3376535_KIT3_H3K27ac_452_fp-stylesuper-L0_hg38.bed.gz"], "GIST KIT4": ["GSM3376538_KIT4_CTCF_541_fp-stylefactor_hg38.bed.gz", "GSM3376539_KIT4_H3K27ac_5423_fp-stylesuper-L0_hg38.bed.gz", "GSM3376539_KIT4_H3K27ac_5423_fp-stylehistone_hg38.bed.gz"], "GIST KIT5": ["GSM3376543_KIT5_H3K27ac_6322_fp-stylehistone_hg38.bed.gz", "GSM3376542_KIT5_CTCF_631_fp-stylefactor_hg38.bed.gz", "GSM3376543_KIT5_H3K27ac_6322_fp-stylesuper-L0_hg38.bed.gz"], "GIST KIT6": ["GSM3376546_KIT6_CTCF_1468921_fp-stylefactor_hg38.bed.gz"], "GIST KIT7": ["GSM3376550_KIT7_H3K27ac_1286912_fp-stylesuper-L0_hg38.bed.gz", "GSM3376549_KIT7_CTCF_1286911_fp-stylefactor_hg38.bed.gz", "GSM3376550_KIT7_H3K27ac_1286912_fp-stylehistone_hg38.bed.gz"], "GIST KIT8": ["GSM3376553_KIT8_CTCF_122331_fp-stylefactor_hg38.bed.gz", "GSM3376554_KIT8_H3K27ac_122332_fp-stylehistone_hg38.bed.gz", "GSM3376554_KIT8_H3K27ac_122332_fp-stylesuper-L0_hg38.bed.gz"], "GIST KIT9": ["GSM3376558_KIT9_H3K27ac_2882523_fp-stylesuper-L0_hg38.bed.gz", "GSM3376557_KIT9_CTCF_288251_fp-stylefactor_hg38.bed.gz", "GSM3376558_KIT9_H3K27ac_2882523_fp-stylehistone_hg38.bed.gz"], "GIST KIT10": ["GSM3376561_KIT10_CTCF_171_fp-stylefactor_hg38.bed.gz"], "GIST KIT11": ["GSM3376564_KIT11_H3K27ac_145552_fp-stylehistone_hg38.bed.gz", "GSM3376563_KIT11_CTCF_145551_fp-stylefactor_hg38.bed.gz", "GSM3376564_KIT11_H3K27ac_145552_fp-stylesuper-L0_hg38.bed.gz"], "NSM1": ["GSM3376567_nsm1_H3K27ac_9272_fp-stylesuper-L0_hg38.bed.gz", "GSM3376566_nsm1_CTCF_9271_fp-stylefactor_hg38.bed.gz", "GSM3376567_nsm1_H3K27ac_9272_fp-stylehistone_hg38.bed.gz"], "NSM2": ["GSM3376570_nsm2_CTCF_92110_fp-stylefactor_hg38.bed.gz"], "NSM3": ["GSM3376573_nsm3_CTCF_92121_fp-stylefactor_hg38.bed.gz"], "NSM4": ["GSM3376575_nsm4_CTCF_92161_fp-stylefactor_hg38.bed.gz"], "GIST PDGFRA1": ["GSM3376578_PDGFRA1_H3K27ac_462_fp-stylehistone_hg38.bed.gz", "GSM3376577_PDGFRA1_CTCF_461_fp-stylefactor_hg38.bed.gz", "GSM3376578_PDGFRA1_H3K27ac_462_fp-stylesuper-L0_hg38.bed.gz"], "GIST PDGFRA2": ["GSM3376581_PDGFRA2_CTCF_94431_fp-stylefactor_hg38.bed.gz", "GSM3376582_PDGFRA2_H3K27ac_94432_fp-stylehistone_hg38.bed.gz", "GSM3376582_PDGFRA2_H3K27ac_94432_fp-stylesuper-L0_hg38.bed.gz"], "GIST S5": ["GSM3376590_s5_H3K27ac_31702_fp-stylehistone_hg38.bed.gz", "GSM3376589_s5_CTCF_31701_fp-stylefactor_hg38.bed.gz", "GSM3376590_s5_H3K27ac_31702_fp-stylesuper-L0_hg38.bed.gz"], "GIST S6": ["GSM3376595_s6_H3K27ac_35702_fp-stylehistone_hg38.bed.gz", "GSM3376595_s6_H3K27ac_35702_fp-stylesuper-L0_hg38.bed.gz", "GSM3376594_s6_CTCF_35701_fp-stylefactor_hg38.bed.gz"], "GIST S1": ["GSM3377440_S1_H3K27ac_202_fp-stylesuper-L0_hg38.bed.gz", "GSM3377440_S1_H3K27ac_202_fp-stylehistone_hg38.bed.gz", "GSM3377439_S1_CTCF_201_fp-stylefactor_hg38.bed.gz"], "GIST S2": ["GSM3377444_S2_H3K27ac_2123_fp-stylesuper-L0_hg38.bed.gz", "GSM3377444_S2_H3K27ac_2123_fp-stylehistone_hg38.bed.gz", "GSM3377443_S2_CTCF_221_fp-stylefactor_hg38.bed.gz"], "GIST S3": ["GSM3377448_S3_H3K27ac_552_fp-stylehistone_hg38.bed.gz", "GSM3377447_S3_CTCF_551_fp-stylefactor_hg38.bed.gz", "GSM3377448_S3_H3K27ac_552_fp-stylesuper-L0_hg38.bed.gz"], "GIST S4": ["GSM3377452_S4_H3K27ac_572_fp-stylehistone_hg38.bed.gz", "GSM3377451_S4_CTCF_571_fp-stylefactor_hg38.bed.gz", "GSM3377452_S4_H3K27ac_572_fp-stylesuper-L0_hg38.bed.gz"], "GIST S1 xeno": ["GSM3983451_xeno_H3K27ac_2032_fp-stylehistone_hg38.bed.gz", "GSM3983450_xeno_CTCF_2031_fp-stylefactor_hg38.bed.gz"], "Bone marrow": ["GSM3316872_AML_P23_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316857_AML_P12_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316873_AML_P23_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316865_AML_P19_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316881_AML_P27_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316858_AML_P13_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316862_AML_P16_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316864_AML_P18_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316867_AML_P20_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316853_AML_P8_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316846_AML_P1_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316879_AML_P26_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316850_AML_P5_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316875_AML_P24_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316847_AML_P2_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316871_AML_P22_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316874_AML_P24_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316852_AML_P7_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316861_AML_P16_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316878_AML_P26_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316849_AML_P4_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316880_AML_P27_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316866_AML_P20_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316863_AML_P17_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316851_AML_P6_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316860_AML_P15_Dx_H3K27ac_peaks.narrowPeak.gz"], "Peripheral Blood": ["GSM3316855_AML_P10_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316869_AML_P21_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316854_AML_P9_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316856_AML_P11_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316877_AML_P25_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316848_AML_P3_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316868_AML_P21_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316859_AML_P14_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316870_AML_P22_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316876_AML_P25_Dx_H3K27ac_peaks.narrowPeak.gz"], "induced Pluripotent Stem Cells": ["GSM4059141_HE_rep3.bed.gz", "GSM4059143_HLC_rep2.bed.gz", "GSM4059139_HE_rep1.bed.gz", "GSM4059142_HLC_rep1.bed.gz", "GSM4059137_DE_rep2.bed.gz", "GSM4059140_HE_rep2.bed.gz", "GSM4059135_iPSC_CONTROL_rep3.bed.gz", "GSM4059138_DE_rep3.bed.gz", "GSM4059144_HLC_rep3.bed.gz", "GSM4059133_iPSC_CONTROL_rep1.bed.gz", "GSM4059134_iPSC_CONTROL_rep2.bed.gz", "GSM4059136_DE_rep1.bed.gz"], "Acute Myeloid Leukemia": ["GSM4057519_HL-60_DNase.narrowPeak.gz", "GSM4057502_OCI-AML3_H3K27ac.broadPeak.gz", "GSM4057498_HL-60_H3K27ac.broadPeak.gz", "GSM4057517_OCI-AML3_DNase.narrowPeak.gz", "GSM4057518_Molm13_DNase.narrowPeak.gz", "GSM4057500_Molm13_H3K27ac.broadPeak.gz"], "Chronic Myelogenous Leukemia": ["GSM4057515_K562_LTR2BgRNAs_dCas9.narrowPeak.gz", "GSM4057509_K562_H3K27ac.broadPeak.gz"], "KMS11": ["GSM3791753_KMS11_H3K27ac_noinput_e6_peaks.bed.gz", "GSM3791747_2-KMS_CTCF_noinput_peaks.bed.gz"], "NTKO": ["GSM3791755_NTKO2-2_H3K27ac_noinput_e6_peaks.bed.gz", "GSM3791759_NTKO_Rad21_rep1_noinput_e5_peaks.bed.gz", "GSM3791749_5-NTKO2-2_CTCF_noinput_peaks.bed.gz", "GSM3791754_NTKO2-1_H3K27ac_noinput_e6_peaks.bed.gz", "GSM3791748_4-NTKO2-1_CTCF_noinput_peaks.bed.gz", "GSM3791760_NTKO_Rad21_rep2_noinput_e5_peaks.bed.gz"], "TKO": ["GSM3791757_TKO2-1_H3K27ac_noinput_e6_peaks.bed.gz", "GSM3791751_7-TKO2-1_CTCF_noinput_peaks.bed.gz", "GSM3791750_6-TKO1-1_CTCF_noinput_peaks.bed.gz", "GSM3791762_TKO_Rad21_rep2_noinput_e5_peaks.bed.gz", "GSM3791761_TKO_Rad21_rep1_noinput_e5_peaks.bed.gz", "GSM3791758_TKO2-2_H3K27ac_noinput_e6_peaks.bed.gz", "GSM3791752_8-TKO2-2_CTCF_noinput_peaks.bed.gz", "GSM3791756_TKO1_H3K27ac_noinput_e6_peaks.bed.gz"], "Hepatocellular carcinoma": ["GSM3680091_HepG2_SC5_ratio.bed.gz", "GSM3680089_HepG2_SC3_ratio.bed.gz", "GSM3680090_HepG2_SC4_ratio.bed.gz", "GSM3680095_HepG2_SC9_ratio.bed.gz", "GSM3680081_HepG2_1ng_1_ratio.bed.gz", "GSM3680094_HepG2_SC8_ratio.bed.gz", "GSM3680082_HepG2_1ng_2_ratio.bed.gz", "GSM3680079_HepG2_100ng_1_ratio.bed.gz", "GSM3680093_HepG2_SC7_ratio.bed.gz", "GSM3680096_HepG2_SC10_ratio.bed.gz", "GSM3680080_HepG2_100ng_2_ratio.bed.gz", "GSM3680087_HepG2_SC1_ratio.bed.gz", "GSM3680088_HepG2_SC2_ratio.bed.gz", "GSM3680092_HepG2_SC6_ratio.bed.gz"], "Chronic myelogenous leukemia": ["GSM3680083_K562_100ng_1_ratio.bed.gz", "GSM3680098_K562_SC2_ratio.bed.gz", "GSM3680102_K562_SC6_ratio.bed.gz", "GSM3680104_K562_SC8_ratio.bed.gz", "GSM3680106_K562_SC10_ratio.bed.gz", "GSM3680103_K562_SC7_ratio.bed.gz", "GSM3680097_K562_SC1_ratio.bed.gz", "GSM3680099_K562_SC3_ratio.bed.gz", "GSM3680100_K562_SC4_ratio.bed.gz", "GSM3680084_K562_100ng_2_ratio.bed.gz", "GSM3680085_K562_1ng_1_ratio.bed.gz", "GSM3680101_K562_SC5_ratio.bed.gz", "GSM3680086_K562_1ng_2_ratio.bed.gz", "GSM3680105_K562_SC9_ratio.bed.gz"], "Embryonic stem cell line": ["GSM4026518_ESC_100ng_ratio.bed.gz"], "human embryonic kidney cells": ["GSM4026856_VP7_interactions.bed.gz", "GSM4026859_VP10_interactions.bed.gz", "GSM4026855_VP6_interactions.bed.gz", "GSM4026858_VP9_interactions.bed.gz", "GSM4026857_VP8_interactions.bed.gz"], "HEK293T Cells": ["GSM3151927_HEK293T.Cascade_HBE_crRNA.antiFlag.rep1.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151928_HEK293T.Cascade_HBE_crRNA.antiFlag.rep2.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151934_HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep2.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151929_HEK293T.Cascade_HBE_crRNA.antiFlag.rep3.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151935_HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep3.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151933_HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep1.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151939_HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep1.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151941_HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep3.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151940_HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep2.dedup.masked.sorted_peaks.narrowPeak.gz"], "Lymphoblastoid": ["GSM3093783_Lyu_ChIP_Seq_APH2e-3_peaks.broadPeak.gz", "GSM3093784_Lyu_ChIP_Seq_HU1e-3_peaks.broadPeak.gz", "GSM3093781_Lyu_ChIP_Seq_UN2e-3_peaks.broadPeak.gz", "GSM3093780_Lyu_ChIP_Seq_UN1e-3_peaks.broadPeak.gz", "GSM3093782_Lyu_ChIP_Seq_APH1e-3_peaks.broadPeak.gz", "GSM3093786_Lyu_ChIP_Seq_MMS1e-3_peaks.broadPeak.gz", "GSM3093787_Lyu_ChIP_Seq_MMS2e-3_peaks.broadPeak.gz", "GSM3093785_Lyu_ChIP_Seq_HU2e-3_peaks.broadPeak.gz"], "primary GBM cell culture": ["GSM3439943_G567_h3k27_ip_rep2_WRT_G567_h3k27_input_peaks.broadPeak.gz", "GSM3439939_G523_h3k27_ip_rep1_WRT_G523_h3k27_input_peaks.broadPeak.gz", "GSM3439940_G523_h3k27_ip_rep2_WRT_G523_h3k27_input_peaks.broadPeak.gz", "GSM3439930_G523_ctcf_ip_rep1_WRT_G523_ctcf_input_rep1_peaks.narrowPeak.gz", "GSM3439946_G583_h3k27_ip_rep2_WRT_G583_h3k27_input_rep1_peaks.broadPeak.gz", "GSM3439942_G567_h3k27_ip_rep1_WRT_G567_h3k27_input_peaks.broadPeak.gz", "GSM3439933_G567_ctcf_ip_rep1_WRT_G567_ctcf_input_rep1_peaks.narrowPeak.gz", "GSM3439931_G523_ctcf_ip_rep2_WRT_G523_ctcf_input_rep2_peaks.narrowPeak.gz", "GSM3439945_G583_h3k27_ip_rep1_WRT_G583_h3k27_input_rep1_peaks.broadPeak.gz", "GSM3439937_G583_ctcf_ip_rep2_WRT_G583_ctcf_input_rep1_peaks.narrowPeak.gz", "GSM3439936_G583_ctcf_ip_rep1_WRT_G583_ctcf_input_rep1_peaks.narrowPeak.gz", "GSM3439934_G567_ctcf_ip_rep2_WRT_G567_ctcf_input_rep1_peaks.narrowPeak.gz"], "HeLa cells": ["GSM3029785_MACS_CENP-A-TAP_G2-2.bed.gz", "GSM3029794_SICER_CENP-A-TAP_midS-1.bed.gz", "GSM3029785_MACS_CENP-A-TAP_G2-1.bed.gz", "GSM3029788_SICER_CENP-A-LAP_G1-2.bed.gz", "GSM3029789_SICER_Single_copy_variants_CENP-A-LAP_G2-2.bed.gz", "GSM3029784_MACS_CENP-A-TAP_G1-2.bed.gz", "GSM3029785_SICER_CENP-A-TAP_G2.YA6_newInput.bed.gz", "GSM3029784_SICER_single_copy_variant_CENP-A-TAP_G1-1.bed.gz", "GSM3029802_SICER_Repli-seq_BrdU_lateS_S7-2.bed.gz", "GSM3029785_SICER_CENP-A-TAP_G2.YA3_newInput.bed.gz", "GSM3029788_MACS_CENP-A-LAP_G1-2.bed.gz", "GSM3029800_SICER_Repli-seq_BrdU_S1-2.bed.gz", "GSM3029788_SICER_CENP-A-LAP_G1-1.bed.gz", "GSM3762923_Az1.cluster.bed.gz", "GSM3762926_B1.cluster.bed.gz", "GSM3029785_SICER_single_copy_variant_CENP-A-TAP_G2-1.bed.gz", "GSM3029786_SICER_H3.1-TAP-2.bed.gz", "GSM3029801_SICER_Repli-seq_BrdU_midS_S4-2.bed.gz", "GSM3029784_SICER_CENP-A-TAP_G1.YA5_newInput.bed.gz", "GSM3029784_SICER_CENP-A-TAP_G1.YA2_newInput.bed.gz", "GSM3029789_MACS_CENP-A-LAP_G2-1.bed.gz", "GSM3029783_SICER_single_copy_variant_CENP-A-TAP_RC-1.bed.gz", "GSM3029794_SICER_CENP-A-TAP_midS-2.bed.gz", "GSM3029783_MACS_CENP-A-TAP_RC-1.bed.gz", "GSM3029786_SICER_single_copy_variant_H3.1-TAP_RC-1.bed.gz", "GSM3029788_SICER_Single_copy_variants_CENP-A-LAP_G1-2.bed.gz", "GSM3029794_SICER_single_copy_variant_CENP-A-TAP_midS-1.bed.gz", "GSM3029788_SICER_Single_copy_variants_CENP-A-LAP_G1-1.bed.gz", "GSM3029788_MACS_CENP-A-LAP_G1-1.bed.gz", "GSM3029789_SICER_CENP-A-LAP_G2.Yael5_newInput.bed.gz", "GSM3029783_SICER_CENP-A-TAP_RC-1.bed.gz", "GSM3762928_B3.cluster.bed.gz", "GSM3029783_MACS_CENP-A-TAP_RC-2.bed.gz", "GSM3029784_MACS_CENP-A-TAP_G1-1.bed.gz", "GSM3029784_SICER_single_copy_variant_CENP-A-TAP_G1-2.bed.gz", "GSM3762924_Az2.cluster.bed.gz", "GSM3029789_SICER_CENP-A-LAP_G2.Yael4_newInput.bed.gz", "GSM3762925_Az3.cluster.bed.gz", "GSM3029783_SICER_CENP-A-TAP_RC-2.bed.gz", "GSM3029786_MACS_H3.1-TAP-2.bed.gz", "GSM3029786_SICER_H3.1-TAP-1.bed.gz", "GSM3029789_MACS_CENP-A-LAP_G2-2.bed.gz", "GSM3029785_SICER_single_copy_variant_CENP-A-TAP_G2-2.bed.gz", "GSM3029786_SICER_single_copy_variant_H3.1-TAP_RC-2.bed.gz", "GSM3029789_SICER_Single_copy_variants_CENP-A-LAP_G2-1.bed.gz", "GSM3029801_SICER_Repli-seq_BrdU_midS_S4-1.bed.gz", "GSM3029794_SICER_single_copy_variant_CENP-A-TAP_midS-2.bed.gz", "GSM3029786_MACS_H3.1-TAP-1.bed.gz", "GSM3029802_SICER_Repli-seq_BrdU_lateS_S7-1.bed.gz", "GSM3762927_B2.cluster.bed.gz", "GSM3029800_SICER_Repli-seq_BrdU_S1-1.bed.gz", "GSM3029783_SICER_single_copy_variant_CENP-A-TAP_RC-2.bed.gz"], "adult left ventricle, H3K27ac ChIP": ["GSM3605899_LV1400.replicated.broadPeak.gz", "GSM3605930_LV1392.replicated.broadPeak.gz", "GSM3605934_LV1437.replicated.broadPeak.gz", "GSM3605895_LV1325.replicated.broadPeak.gz", "GSM3605879_LV1200.replicated.broadPeak.gz", "GSM3605928_LV1371.replicated.broadPeak.gz", "GSM3605932_LV1433.replicated.broadPeak.gz", "GSM3605897_LV1356.replicated.broadPeak.gz", "GSM3605891_LV1277.replicated.broadPeak.gz", "GSM6202204_1155.replicated.broadPeak.gz", "GSM3605918_LV1264.replicated.broadPeak.gz", "GSM3605882_LV1215.replicated.broadPeak.gz", "GSM3605923_LV1300.replicated.broadPeak.gz", "GSM3605937_LV1535.replicated.broadPeak.gz", "GSM3605890_LV1273.replicated.broadPeak.gz", "GSM3605936_LV1532.replicated.broadPeak.gz", "GSM3605901_LV1452.replicated.broadPeak.gz", "GSM6202203_1137.replicated.broadPeak.gz", "GSM3605910_LV1033.replicated.broadPeak.gz", "GSM3605893_LV1294.replicated.broadPeak.gz", "GSM3605925_LV1304.replicated.broadPeak.gz", "GSM3605906_LV1009.replicated.broadPeak.gz", "GSM6202210_1310.replicated.broadPeak.gz", "GSM3605912_LV1072.replicated.broadPeak.gz", "GSM3605919_LV1275.replicated.broadPeak.gz", "GSM6202206_1173.replicated.broadPeak.gz", "GSM6202209_1224.replicated.broadPeak.gz", "GSM3605873_LV1121.replicated.broadPeak.gz", "GSM3605908_LV1028.replicated.broadPeak.gz", "GSM3605877_LV1183.replicated.broadPeak.gz", "GSM3605875_LV1160.replicated.broadPeak.gz", "GSM3605927_LV1342.replicated.broadPeak.gz", "GSM6202208_1211.replicated.broadPeak.gz", "GSM3605884_LV1226.replicated.broadPeak.gz", "GSM3605914_LV1223.replicated.broadPeak.gz", "GSM3605888_LV1259.replicated.broadPeak.gz", "GSM6202207_1205.replicated.broadPeak.gz", "GSM3605921_LV1290.replicated.broadPeak.gz", "GSM6202205_1167.replicated.broadPeak.gz", "GSM3605880_LV1202.replicated.broadPeak.gz", "GSM3605904_LV1558.replicated.broadPeak.gz", "GSM3605916_LV1262.replicated.broadPeak.gz", "GSM3605903_LV1471.replicated.broadPeak.gz", "GSM3605886_LV1248.replicated.broadPeak.gz"], "embryonic heart, H3K27ac ChIP": ["GSM3605939_11963_CS22.replicated.broadPeak.gz"], "fetal heart, H3K27ac ChIP": ["GSM3605941_12434_PCW10.replicated.broadPeak.gz", "GSM3605943_12522_PCW10.replicated.broadPeak.gz", "GSM3605945_12569_PCW10.replicated.broadPeak.gz"], "fetal left ventricle, H3K27ac ChIP": ["GSM3605947_12570_LV_PCW17.replicated.broadPeak.gz"], "Peripheral blood neutrophils": ["GSM3612220_Neutrophil_Ecoli_CTCF_ChIPseq_peaks.bed.bz2", "GSM3612222_Neutrophil_Ecoli_H3K27ac_ChIPseq_peaks.bed.bz2", "GSM3612227_Neutrophil_US_H3K4me3_ChIPseq_peaks.bed.bz2", "GSM3612209_Neutrophil_Ecoli_SMC3_ChIPseq_peaks.bed.bz2", "GSM3612223_Neutrophil_US_H3K4me1_ChIPseq_peaks.bed.bz2", "GSM3612208_Neutrophil_US_SMC3_ChIPseq_peaks.bed.bz2", "GSM3612211_Neutrophil_US_RAD21_ChIPseq_peaks.bed.bz2", "GSM3612225_Neutrophil_PMA_H3K4me1_ChIPseq_peaks.bed.bz2", "GSM3612218_Neutrophil_PMA_CTCF_ChIPseq_peaks.bed.bz2", "GSM3612213_Neutrophil_PMA_RAD21_ChIPseq_peaks.bed.bz2", "GSM3612229_Neutrophil_PMA_H3K4me3_ChIPseq_peaks.bed.bz2", "GSM3612215_Neutrophil_US_CTCF_ChIPseq_peaks.bed.bz2", "GSM3612221_Neutrophil_US_H3K27ac_ChIPseq_peaks.bed.bz2"], "HBMECs": ["GSM2486584_lane22IP_peaks.Converted.bed.gz", "GSM2486584_lane22IP_peaks.bed.gz", "GSM2486582_lane21IP_peaks.Converted.bed.gz", "GSM2486582_lane21IP_peaks.bed.gz"], "VCaP cell line": ["GSM3566911_GATA2peaksR1.narrowPeak.gz", "GSM3566915_GATA2peaksR2.narrowPeak.gz", "GSM3566917_JQ1_GATA2peaksR2.narrowPeak.gz", "GSM3566913_JQ1_GATA2peaksR1.narrowPeak.gz"], "LNCaP Cells": ["GSM3560178_MYBB_r1881_G2_1_MACS2_summits.bed.gz", "GSM3560180_MYBB_G3_R1881_MACS2_summits.bed.gz", "GSM3560179_MYBB_dmso_G2_1_MACS2_summits.bed.gz", "GSM3560181_MYBB_G3_DMSO_MACS2_summits.bed.gz"], "HeLa S3 cells": ["GSM3417015_CaptureSeq_NEAT1_TFR1_control.bed.gz", "GSM3417015_CaptureSeq_NEAT1_TFR2_control.bed.gz", "GSM3417032_TriplexDNASeq_minus_RNA_ligation.bed.gz", "GSM3417009_AsoCaptureSeq_HelaS3_antisense_peaks.bed.gz", "GSM3417036_TriplexDNASeq_plus_RNA_ligation.bed.gz", "GSM3417021_CaptureSeq_NEAT1_TFR2_peaks.bed.gz", "GSM3417012_AsoCaptureSeq_HelaS3_sense.bed.gz", "GSM3417018_CaptureSeq_NEAT1_TFR1_peaks.bed.gz"], "T47D whole cell": ["GSM3045129_FPR_1_peaks.narrowPeak.gz", "GSM3415544_yc_033_peaks.narrowPeak.gz", "GSM3415553_yc_042_peaks.narrowPeak.gz", "GSM3045132_FPR_4_peaks.narrowPeak.gz", "GSM3045130_FPR_2_peaks.narrowPeak.gz", "GSM3045112_RAF9_20637_CAGATC_peaks.narrowPeak.gz", "GSM3045134_FPR_6_peaks.narrowPeak.gz", "GSM3045108_RAF2_20630_ACTGAT_peaks.narrowPeak.gz", "GSM3045109_RAF3_20631_ATGTCA_peaks.narrowPeak.gz", "GSM3415552_yc_041_peaks.narrowPeak.gz", "GSM3045123_RAF3_11948_TAGCTT_peaks.broadPeak.gz", "GSM3045110_RAF7_20635_CGATGT_peaks.narrowPeak.gz", "GSM3045107_RAF1_20629_GTCCGC_peaks.narrowPeak.gz", "GSM3415549_yc_038_peaks.narrowPeak.gz", "GSM3415555_yc_044_peaks.narrowPeak.gz", "GSM3415545_yc_034_peaks.narrowPeak.gz", "GSM3045121_RAF1_11946_ATCACG_peaks.broadPeak.gz", "GSM3045122_RAF2_11947_ACTTGA_peaks.broadPeak.gz", "GSM3045124_RAF13_11953_CAGATC_peaks.broadPeak.gz", "GSM3045133_FPR_5_peaks.narrowPeak.gz", "GSM3415548_yc_037_peaks.narrowPeak.gz", "GSM3415551_yc_040_peaks.narrowPeak.gz", "GSM3045131_FPR_3_peaks.narrowPeak.gz", "GSM3415546_yc_035_peaks.narrowPeak.gz", "GSM3415547_yc_036_peaks.narrowPeak.gz", "GSM3045111_RAF8_20636_TGACCA_peaks.narrowPeak.gz", "GSM3045113_RAF10_20638_CCGTCC_peaks.narrowPeak.gz", "GSM3415550_yc_039_peaks.narrowPeak.gz", "GSM3415554_yc_043_peaks.narrowPeak.gz"], "GM": ["GSM3417113_yc_001_01_01_chipseq_peaks.narrowPeak.gz"], "A549 lung adenocarcinoma cells": ["GSM3462428_180423_ChIP_B1_HN_D34.peak.bed.gz", "GSM3462427_180409_ChIP_A1_HN_D34.peak.bed.gz"], "Human breast adenocarcinoma cell-line MCF7": ["GSM3440915_shKDM4B_H3K9me3_ChIPSeq_peaks.bed.gz", "GSM3440916_KDM4B_H3K9me3_ChIPSeq_peaks.bed.gz", "GSM3440914_WT_H3K9me3_ChIPSeq_peaks.bed.gz"], "Human blood monocytes derived": ["GSM3324464_Human7_Pol2_mock_24h_regions.bed.gz", "GSM3324485_Human10_Pol2_ZIKVneg_24h_regions.bed.gz", "GSM3324470_Human7_H3K27ac_ZIKVpos_24h_regions.bed.gz", "GSM3324466_Human7_Pol2_ZIKVpos_24h_regions.bed.gz", "GSM3324473_Human8_H3K27ac_ZIKVneg_24h_regions.bed.gz", "GSM3324465_Human7_Pol2_ZIKVneg_24h_regions.bed.gz", "GSM3324478_Human10_CTCF_mock_24h_peaks.bed.gz", "GSM3324463_Human6_Pol2_ZIKVpos_24h_regions.bed.gz", "GSM3324462_Human6_Pol2_ZIKVneg_24h_regions.bed.gz", "GSM3324468_Human7_H3K27ac_mock_24h_regions.bed.gz", "GSM3324486_Human10_Pol2_ZIKVpos_24h_regions.bed.gz", "GSM3324475_Human9_H3K27ac_mock_24h_regions.bed.gz", "GSM3324480_Human10_CTCF_ZIKVpos_24h_peaks.bed.gz", "GSM3324479_Human10_CTCF_ZIKVneg_24h_peaks.bed.gz", "GSM3324469_Human7_H3K27ac_ZIKVneg_24h_regions.bed.gz", "GSM3324476_Human9_H3K27ac_ZIKVneg_24h_regions.bed.gz", "GSM3324461_Human6_Pol2_mock_24h_regions.bed.gz", "GSM3324484_Human10_Pol2_mock_24h_regions.bed.gz", "GSM3324472_Human8_H3K27ac_mock_24h_regions.bed.gz", "GSM3324474_Human8_H3K27ac_ZIKVpos_24h_regions.bed.gz", "GSM3324477_Human9_H3K27ac_ZIKVpos_24h_regions.bed.gz"], "A549 cell line": ["GSM3204806_NEB_32ug_peaks_sorted_named.bed.gz", "GSM3204808_Millipore_12ug_peaks_sorted_named.bed.gz", "GSM3204811_Millipore_500ng_peaks_sorted_named_Rep1.bed.gz", "GSM3204813_Millipore_500ng_peaks_sorted_named_Rep2.bed.gz", "GSM3204805_Synaptic_32ug_peaks_sorted_named.bed.gz", "GSM3204810_Millipore_2ug_peaks_sorted_named.bed.gz", "GSM3204809_Millipore_6ug_peaks_sorted_named.bed.gz", "GSM3204807_Millipore_32ug_peaks_sorted_named.bed.gz"], "Lung Adenocarcinorma Primary Tumor": 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"GSM2679346_pat_116_Graz_12_3_2011_cpgmeth.bed.gz", "GSM2679255_pat_074_N2375_15_cpgmeth.bed.gz", "GSM2679317_pat_104_N2506_14_B_cpgmeth.bed.gz", "GSM3071769_pat_158_N2242_15_cpgmeth.bed.gz", "GSM3071842_pat_262_Graz_51_1_cpgmeth.bed.gz", "GSM3071740_pat_139_N654_12B_cpgmeth.bed.gz", "GSM2679350_pat_118_N2566_15_B_cpgmeth.bed.gz", "GSM2679311_pat_102_N115_14_cpgmeth.bed.gz", "GSM2679310_pat_101_N722_15_cpgmeth.bed.gz", "GSM2679218_pat_059_N1196_15_cpgmeth.bed.gz", "GSM2679069_pat_011_N1201_15_III_cpgmeth.bed.gz", "GSM2679130_pat_027_N886_12_rk_cpgmeth.bed.gz", "GSM2679319_pat_106_N995_11_cpgmeth.bed.gz"], "Human kidney glomerular outgrowth cultures": ["GSM3196016_DS41157-LN33957-AG7003-peaks.bed.gz", "GSM3196013_DS35973-LN30328-AG6995-peaks.bed.gz", "GSM3196015_DS40507-LN33574-AG7000-peaks.bed.gz", "GSM3196014_DS39386-LN32272-AG3852-peaks.bed.gz"], "Human kidney cortex tubule cultures": ["GSM3196017_DS27824-LN29654-AG3899-peaks.bed.gz", "GSM3196019_DS41396-LN34037-AG7005-peaks.bed.gz", 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line": ["GSM2464929_HEC.shM3.bed.gz", "GSM2464925_HEC.mu14.bed.gz", "GSM2464931_HEC.wt14.bed.gz", "GSM2464927_HEC.shC.bed.gz"], "Bulk Hi-C Library ESC": ["GSM2845449_ESC_Rep2_500KB_bins.bed.gz", "GSM2845448_ESC_Rep1_DI_TADs.bed.gz", "GSM2845448_ESC_Rep1_500KB_bins.bed.gz", "GSM2845449_ESC_Rep2_DI_TADs.bed.gz"], "Bulk Hi-C Library MES": ["GSM2845450_MES_Rep1_DI_TADs.bed.gz", "GSM2845451_MES_Rep2_500KB_bins.bed.gz", "GSM2845450_MES_Rep1_500KB_bins.bed.gz", "GSM2845451_MES_Rep2_DI_TADs.bed.gz"], "Bulk Hi-C Library CP": ["GSM2845452_CP_Rep1_DI_TADs.bed.gz", "GSM2845453_CP_Rep2_500KB_bins.bed.gz", "GSM2845452_CP_Rep1_500KB_bins.bed.gz", "GSM2845453_CP_Rep2_DI_TADs.bed.gz"], "Bulk Hi-C Library CM": ["GSM2845455_CM_Rep2_DI_TADs.bed.gz", "GSM2845454_CM_Rep1_DI_TADs.bed.gz", "GSM2845455_CM_Rep2_500KB_bins.bed.gz", "GSM2845454_CM_Rep1_500KB_bins.bed.gz"], "Bulk Hi-C Library Fetal Heart": ["GSM2845457_Fetal_Heart_Rep2_500KB.bins.bed.gz", "GSM2845456_Fetal_Heart_Rep1_500KB.bins.bed.gz"], "ATAC Library ESC": ["GSM2845469_ESC_Rep2_MACS_peaks.narrowPeak.gz", "GSM2845468_ESC_Rep1_MACS_peaks.narrowPeak.gz"], "ATAC Library MES": ["GSM2845470_MES_Rep1_MACS_peaks.narrowPeak.gz", "GSM2845471_MES_Rep2_MACS_peaks.narrowPeak.gz"], "ATAC Library CP": ["GSM2845473_CP_Rep2_MACS_peaks.narrowPeak.gz", "GSM2845472_CP_Rep1_MACS_peaks.narrowPeak.gz"], "ATAC Library CM": ["GSM2845474_CM_Rep1_MACS_peaks.narrowPeak.gz", "GSM2845475_CM_Rep2_MACS_peaks.narrowPeak.gz"], "Post-mitotic differentiated muscle cells - MYOTUBES": ["GSM2356705_annotated_peaks_TRF2.bed.gz", "GSM2356704_annotated_peaks_shTRF2.bed.gz", "GSM2356706_annotated_peaks_Empty.bed.gz", "GSM2356703_annotated_peaks_shScramble.bed.gz"], "T-ALL1_DMSO": ["GSM2793825_TALL1.DK27Ac_summits.bed.gz", "GSM2793827_TALL1.N3.DMSO_summits.bed.gz"], "T-ALL1_GSI": ["GSM2793826_TALL1.GK27Ac_summits.bed.gz", "GSM2793828_TALL1.N3.GSI_summits.bed.gz"], "HT1080": ["GSM2584469_PFV_4comp_WT_HT1080_Feb2016_hg38_2bp.bed.gz", "GSM2584470_PFV_4comp_RQ_HT1080_Feb2016_hg38_2bp.bed.gz", "GSM2584481_SimianFV_2comp_WT_combined_Sept2015_hg38_2bp.bed.gz", "GSM2584477_PFV_2comp_WT_HT1080_PL1_PL3_PL4_PL14_P1_P7_SeptOct2015_hg38_2bp.bed.gz", "GSM2584478_PFV_2comp_RQ_HT1080_PL15_P2_P11_SeptOct2015_hg38_2bp.bed.gz", "GSM2584482_SimianFV_2comp_RQ_combined_Feb2016_hg38_2bp.bed.gz"], "MRC5": ["GSM2584471_PFV_4comp_WT_MRC5_July2016_PL7_2bp_hg38.bed.gz", "GSM2584479_PFV_2comp_WT_MRC5_July2016_PL1_PL13_combined_2bp_hg38.bed.gz", "GSM2584472_PFV_4comp_RQ_MRC5_July2016_PL8_2bp_hg38.bed.gz", "GSM2584480_PFV_2comp_RQ_MRC5_July2016_PL2_PL14_combined_2bp_hg38.bed.gz"], "HL-60": ["GSM2083756_HL60-Rep3.peaks.bed.gz", "GSM2083754_HL60-Rep1.peaks.bed.gz", "GSM2083755_HL60-Rep2.peaks.bed.gz"], "Neutrophil": ["GSM2083793_24h-Neu-Rep1.peaks.bed.gz", "GSM2083790_12h-Neu-Rep1.peaks.bed.gz", "GSM2083804_120h-Neu-Rep3.peaks.bed.gz", "GSM2083803_120h-Neu-Rep2.peaks.bed.gz", "GSM2083786_3h-Neu-Rep3.peaks.bed.gz", "GSM2083801_96h-Neu-Rep3.peaks.bed.gz", "GSM2083807_120h-NeuLPS-Rep3.peaks.bed.gz", "GSM2083795_24h-Neu-Rep3.peaks.bed.gz", "GSM2083805_120h-NeuLPS-Rep1.peaks.bed.gz", "GSM2083788_6h-Neu-Rep2.peaks.bed.gz", "GSM2083800_96h-Neu-Rep2.peaks.bed.gz", "GSM2083791_12h-Neu-Rep2.peaks.bed.gz", "GSM2083802_120h-Neu-Rep1.peaks.bed.gz", "GSM2083785_3h-Neu-Rep2.peaks.bed.gz", "GSM2083806_120h-NeuLPS-Rep2.peaks.bed.gz", "GSM2083797_48h-Neu-Rep2.peaks.bed.gz", "GSM2083799_96h-Neu-Rep1.peaks.bed.gz", "GSM2083789_6h-Neu-Rep3.peaks.bed.gz", "GSM2083794_24h-Neu-Rep2.peaks.bed.gz", "GSM2083792_12h-Neu-Rep3.peaks.bed.gz", "GSM2083798_48h-Neu-Rep3.peaks.bed.gz", "GSM2083787_6h-Neu-Rep1.peaks.bed.gz", "GSM2083796_48h-Neu-Rep1.peaks.bed.gz", "GSM2083784_3h-Neu-Rep1.peaks.bed.gz"], "Monocyte": ["GSM2083822_48h-Mon-Rep3.peaks.bed.gz", "GSM2083818_24h-Mon-Rep2.peaks.bed.gz", "GSM2083825_96h-Mon-Rep3.peaks.bed.gz", "GSM2083823_96h-Mon-Rep1.peaks.bed.gz", "GSM2083821_48h-Mon-Rep2.peaks.bed.gz", "GSM2083813_6h-Mon-Rep3.peaks.bed.gz", "GSM2083817_24h-Mon-Rep1.peaks.bed.gz", "GSM2083820_48h-Mon-Rep1.peaks.bed.gz", "GSM2083815_12h-Mon-Rep2.peaks.bed.gz", "GSM2083809_3h-Mon-Rep2.peaks.bed.gz", "GSM2083830_120h-MonLPS-Rep2.peaks.bed.gz", "GSM2083826_120h-Mon-Rep1.peaks.bed.gz", "GSM2083812_6h-Mon-Rep2.peaks.bed.gz", "GSM2083824_96h-Mon-Rep2.peaks.bed.gz", "GSM2083808_3h-Mon-Rep1.peaks.bed.gz", "GSM2083827_120h-Mon-Rep2.peaks.bed.gz", "GSM2083816_12h-Mon-Rep3.peaks.bed.gz", "GSM2083810_3h-Mon-Rep3.peaks.bed.gz", "GSM2083829_120h-MonLPS-Rep1.peaks.bed.gz", "GSM2083811_6h-Mon-Rep1.peaks.bed.gz", "GSM2083828_120h-Mon-Rep3.peaks.bed.gz", "GSM2083819_24h-Mon-Rep3.peaks.bed.gz", "GSM2083831_120h-MonLPS-Rep3.peaks.bed.gz", "GSM2083814_12h-Mon-Rep1.peaks.bed.gz"], "Monocyte-derived Macrophage": ["GSM2083836_126h-MonPMA-Rep2.peaks.bed.gz", "GSM2083837_126h-MonPMA-Rep3.peaks.bed.gz", "GSM2083841_144h-MonPMA-Rep1.peaks.bed.gz", "GSM2083835_126h-MonPMA-Rep1.peaks.bed.gz", "GSM2083832_123h-MonPMA-Rep1.peaks.bed.gz", "GSM2083843_144h-MonPMA-Rep3.peaks.bed.gz", "GSM2083847_168h-MonPMA-LPS-Rep1.peaks.bed.gz", "GSM2083845_168h-MonPMA-Rep2.peaks.bed.gz", "GSM2083833_123h-MonPMA-Rep2.peaks.bed.gz", "GSM2083834_123h-MonPMA-Rep3.peaks.bed.gz", "GSM2083844_168h-MonPMA-Rep1.peaks.bed.gz", "GSM2083838_132h-MonPMA-Rep1.peaks.bed.gz", "GSM2083839_132h-MonPMA-Rep2.peaks.bed.gz", "GSM2083840_132h-MonPMA-Rep3.peaks.bed.gz", "GSM2083849_168h-MonPMA-LPS-Rep3.peaks.bed.gz", "GSM2083846_168h-MonPMA-Rep3.peaks.bed.gz", "GSM2083842_144h-MonPMA-Rep2.peaks.bed.gz", "GSM2083848_168h-MonPMA-LPS-Rep2.peaks.bed.gz"], "primary DIPG tumor cell line": ["GSM2266131_DIPG_DIPG012_K27M_DMSO_H3K27me3.bed.gz", "GSM2266135_DIPG_SF8628_K27M_DMSO_H3K27me3.bed.gz", "GSM2266133_DIPG_SF7761_K27M_DMSO_H3K27me3.bed.gz", "GSM2266129_DIPG_DIPG007_K27M_DMSO_H3K27me3.bed.gz"], "DSMZ ACC 497": ["GSM2059331_HTGTS_MEC1.Ibrutinib.C1_1.bed.gz", "GSM2059322_HTGTS_MEC1.DMSO.C2_2.bed.gz", "GSM2059330_HTGTS_MEC1.Duvelisib.C2_4.bed.gz", "GSM2059327_HTGTS_MEC1.Duvelisib.C1_1.bed.gz", "GSM2430310_HTGTS_MEC1.KO-Idelalisib.C1_1.bed.gz", "GSM2059326_HTGTS_MEC1.Idelalisib.C2_4.bed.gz", "GSM2059329_HTGTS_MEC1.Duvelisib.C2_3.bed.gz", "GSM2059333_HTGTS_MEC1.Ibrutinib.C3_3.bed.gz", "GSM2059323_HTGTS_MEC1.Idelalisib.C1_1.bed.gz", "GSM2430309_HTGTS_MEC1.KO-DMSO.C2_3.bed.gz", "GSM2430315_HTGTS_MEC1.KO-Duvelisib.C2_3.bed.gz", "GSM2430305_HTGTS_MEC1.Duvelisib.C1_5.bed.gz", "GSM2059332_HTGTS_MEC1.Ibrutinib.C1_2.bed.gz", "GSM2430311_HTGTS_MEC1.KO-Idelalisib.C1_2.bed.gz", "GSM2059324_HTGTS_MEC1.Idelalisib.C1_2.bed.gz", "GSM2059325_HTGTS_MEC1.Idelalisib.C2_3.bed.gz", "GSM2430312_HTGTS_MEC1.KO-Idelalisib.C2_3.bed.gz", "GSM2430306_HTGTS_MEC1.Duvelisib.C2_6.bed.gz", "GSM2059328_HTGTS_MEC1.Duvelisib.C1_2.bed.gz", "GSM2059334_HTGTS_MEC1.Ibrutinib.C2_4.bed.gz", "GSM2430313_HTGTS_MEC1.KO-Duvelisib.C1_1.bed.gz", "GSM2430307_HTGTS_MEC1.KO-DMSO.C1_1.bed.gz", "GSM2430314_HTGTS_MEC1.KO-Duvelisib.C1_2.bed.gz", "GSM2059321_HTGTS_MEC1.DMSO.C1_1.bed.gz", "GSM2430308_HTGTS_MEC1.KO-DMSO.C1_2.bed.gz"], "ATCC CRL-3006": ["GSM2059343_HTGTS_JeKo-1.Idelalisib.C2_5.bed.gz", "GSM2059341_HTGTS_JeKo-1.Idelalisib.C2_3.bed.gz", "GSM2059337_HTGTS_JeKo-1.DMSO.C2_3.bed.gz", "GSM2059349_HTGTS_JeKo-1.Duvelisib.C2_5.bed.gz", "GSM2059352_HTGTS_JeKo-1.Ibrutinib.C2_3.bed.gz", "GSM2059335_HTGTS_JeKo-1.DMSO.C1_1.bed.gz", "GSM2059342_HTGTS_JeKo-1.Idelalisib.C2_4.bed.gz", "GSM2059339_HTGTS_JeKo-1.Idelalisib.C1_1.bed.gz", "GSM2059344_HTGTS_JeKo-1.Idelalisib.C2_6.bed.gz", "GSM2059347_HTGTS_JeKo-1.Duvelisib.C2_3.bed.gz", "GSM2059346_HTGTS_JeKo-1.Duvelisib.C1_2.bed.gz", "GSM2059348_HTGTS_JeKo-1.Duvelisib.C2_4.bed.gz", "GSM2059350_HTGTS_JeKo-1.Ibrutinib.C1_1.bed.gz", "GSM2059340_HTGTS_JeKo-1.Idelalisib.C1_2.bed.gz", "GSM2059338_HTGTS_JeKo-1.DMSO.C2_4.bed.gz", "GSM2059345_HTGTS_JeKo-1.Duvelisib.C1_1.bed.gz", "GSM2059336_HTGTS_JeKo-1.DMSO.C1-2_1.bed.gz", "GSM2059351_HTGTS_JeKo-1.Ibrutinib.C1_2.bed.gz"], "hNES cell culture": ["GSM2230419_NS_h3k9me3.broad.bed.gz", "GSM2230418_NS_Trim28.peaks.bed.gz"], "WiCell": ["GSM2257291_ATAC1+2_IDR.narrowPeak.gz"], "H7 ESC": ["GSM2257296_ATAC11+12_IDR.narrowPeak.gz", "GSM2257299_ATAC15+16_IDR.narrowPeak.gz", "GSM2257298_ATAC9+10_IDR.narrowPeak.gz", "GSM2257292_ATAC3+4_IDR.narrowPeak.gz", "GSM2257293_ATAC5+6_IDR.narrowPeak.gz", "GSM2257294_ATAC7+8_IDR.narrowPeak.gz", "GSM2257295_ATAC13+14_IDR.narrowPeak.gz", "GSM2257300_ATAC21+22_IDR.narrowPeak.gz", "GSM2257297_ATAC19+20_IDR.narrowPeak.gz"], "SH-SY5Y cells": ["GSM1898102_SATB1_Control_minus_Control_input.bed.gz", "GSM1898101_ChAT_AB_minus_AB_input.bed.gz", "GSM1898100_ChAT_Control_minus_Control_input.bed.gz", "GSM1898103_SATB1_AB_minus_AB_input.bed.gz"]}, "cell_type": {"Peripheral blood NK cell": ["GSM5255997_NK_RUNX2_peaks.narrowPeak.gz"], "gastric cancer cell line": ["GSM6203247_snu638.peak.bed.gz"], "Erythroid cells": ["GSM5530952_3422_peaks_clean.bed.gz", "GSM5530945_3434_peaks_clean.bed.gz", "GSM5271211_3279_peaks_clean.bed.gz", "GSM5271214_3325_peaks_clean.bed.gz", "GSM5271222_3286_peaks_clean.bed.gz", "GSM5271219_3283_peaks_clean.bed.gz", "GSM5271217_3327_peaks_clean.bed.gz", "GSM5530946_3442_peaks_clean.bed.gz", "GSM5271205_3133_peaks_clean.bed.gz", "GSM5530947_3419_peaks_clean.bed.gz", "GSM5271210_3140_peaks_clean.bed.gz", "GSM5271216_3326_peaks_clean.bed.gz", "GSM5530948_3426_peaks_clean.bed.gz", "GSM5530951_3415_peaks_clean.bed.gz", "GSM5271206_3134_peaks_clean.bed.gz", "GSM5800046_3890_peaks_clean.bed.gz", "GSM5530950_3437_peaks_clean.bed.gz", "GSM5271220_3284_peaks_clean.bed.gz", "GSM5530949_3429_peaks_clean.bed.gz", "GSM5271209_3139_peaks_clean.bed.gz", "GSM5271213_3324_peaks_clean.bed.gz", "GSM5271207_3278_peaks_clean.bed.gz", "GSM5271223_3287_peaks_clean.bed.gz"], "breast": ["GSM6125888_s118a-2_VG-3_S199.bed.gz", "GSM6125841_CE-G_merge.bed.gz", "GSM6125883_s118a-2_EG-1_S194.bed.gz", "GSM6125893_WT_VG-2_S205.bed.gz", "GSM6125884_s118a-2_EG-2_S195.bed.gz", "GSM6125889_WT_EG-1_S201.bed.gz", "GSM6125892_WT_VG-1_S204.bed.gz", "GSM6125846_CV-ER_merge.bed.gz", "GSM6125844_CE-SC_merge.bed.gz", "GSM6125868_GV-ER_merge.bed.gz", "GSM6125885_s118a-2_EG-3_S196.bed.gz", "GSM6125891_WT_EG-3_S203.bed.gz", "GSM6125874_GV-SC_merge.bed.gz", "GSM6125880_s118a-1_VG-1_S191.bed.gz", "GSM6125886_s118a-2_VG-1_S197.bed.gz", "GSM6125890_WT_EG-2_S202.bed.gz", "GSM6125879_s118a-1_EG-3_S190.bed.gz", "GSM6125855_CV-IgG_merge.bed.gz", "GSM6125849_CV-G_merge.bed.gz", "GSM6125866_GE-SC_merge.bed.gz", "GSM6125877_s118a-1_EG-1_S188.bed.gz", "GSM6125858_CV-SC_merge.bed.gz", "GSM6125878_s118a-1_EG-2_S189.bed.gz", "GSM6125894_WT_VG-3_S206.bed.gz", "GSM6125882_s118a-1_VG-3_S193.bed.gz", "GSM6125863_GE-G_merge.bed.gz", "GSM6125887_s118a-2_VG-2_S198.bed.gz", "GSM6125860_GE-ER_merge.bed.gz", "GSM6125881_s118a-1_VG-2_S192.bed.gz", "GSM6125838_CE-ER_merge.bed.gz", "GSM6125871_GV-G_merge.bed.gz"], "Burkitt lymphomas cell line": ["GSM6131567_APBRD7VSAPINPUT_peaks.narrowPeak.gz", "GSM6131565_ANBRD7VSANINPUT_peaks.narrowPeak.gz"], "CD14+ Monocytes": ["GSM5513659_step3.4_peakcall_ORN8L-D3.R1_peaks.narrowPeak.gz", "GSM5513654_step3.4_peakcall_Rest-D4.R1_peaks.narrowPeak.gz", "GSM5513653_step3.4_peakcall_Rest-D3.R1_peaks.narrowPeak.gz", "GSM5513660_step3.4_peakcall_ORN8L-D4.R1_peaks.narrowPeak.gz", "GSM5513656_step3.4_peakcall_CXCL4-D3.R1_peaks.narrowPeak.gz", "GSM5513663_step3.4_peakcall_CXCL4andORN8L-D4.R1_peaks.narrowPeak.gz", "GSM5513661_step3.4_peakcall_ORN8L-D5.R1_peaks.narrowPeak.gz", "GSM5513658_step3.4_peakcall_CXCL4-D5.R1_peaks.narrowPeak.gz", "GSM5513662_step3.4_peakcall_CXCL4andORN8L-D3.R1_peaks.narrowPeak.gz", "GSM5513657_step3.4_peakcall_CXCL4-D4.R1_peaks.narrowPeak.gz", "GSM5513655_step3.4_peakcall_Rest-D5.R1_peaks.narrowPeak.gz", "GSM5513664_step3.4_peakcall_CXCL4andORN8L-D5.R1_peaks.narrowPeak.gz"], "MCF7 cell line": ["GSM5373142_MCF7_Pol2_KD_E2.bed.gz", "GSM5373127_MCF7_Rad21_Ctrl.bed.gz", "GSM5373125_MCF7_Pol2ser2_Ctrl.bed.gz", "GSM5373114_MCF7_CBP_Ctrl.bed.gz", "GSM5373120_MCF7_Mau2_Ctrl.bed.gz", "GSM5880291_New_MCF7_Pol2_Rad21KD_E2.peak.bed.gz", "GSM5373130_MCF7_TAF1_Ctrl.bed.gz", "GSM5880296_New_MCF7_Pol2ser2_Rad21KD_Ctrl.peak.bed.gz", "GSM5880288_New_MCF7_Pol2_NIPBLKD_Ctrl.peak.bed.gz", "GSM5373128_MCF7_Rad21_E2_30min.bed.gz", "GSM5373123_MCF7_Pol2_E2_30min.bed.gz", "GSM5373139_MCF7_p300_KD_Ctrl.bed.gz", "GSM5373124_MCF7_Pol2_E2_45min.bed.gz", "GSM5880293_New_MCF7_Pol2_WT_E2.peak.bed.gz", "GSM5373121_MCF7_Mau2_E2.bed.gz", "GSM5373129_MCF7_Rad21_E2_45min.bed.gz", "GSM5373148_MCF7_ER_E2.bed.gz", "GSM5880289_New_MCF7_Pol2_NIPBLKD_E2.peak.bed.gz", "GSM5880298_New_MCF7_Pol2ser2_WT_Ctrl.peak.bed.gz", "GSM5373141_MCF7_Pol2_KD_Ctrl.bed.gz", "GSM5880292_New_MCF7_Pol2_WT_Ctrl.peak.bed.gz", "GSM5880297_New_MCF7_Pol2ser2_Rad21KD_E2.peak.bed.gz", "GSM5373133_MCF7_p300_E2.bed.gz", "GSM5373137_MCF7_Mau2_KD_Ctrl.bed.gz", "GSM5880290_New_MCF7_Pol2_Rad21KD_Ctrl.peak.bed.gz", "GSM5373147_MCF7_ER_Ctrl.bed.gz", "GSM5880294_New_MCF7_Pol2ser2_NIPBLKD_Ctrl.peak.bed.gz", "GSM5880299_New_MCF7_Pol2ser2_WT_E2.peak.bed.gz", "GSM5373118_MCF7_CTCF_Ctrl.bed.gz", "GSM5880295_New_MCF7_Pol2ser2_NIPBLKD_E2.peak.bed.gz", "GSM5373117_MCF7_AFF4_E2.bed.gz", "GSM5373119_MCF7_CTCF_E2.bed.gz", "GSM5373116_MCF7_AFF4_Ctrl.bed.gz", "GSM5373144_MCF7_Pol2ser2_KD_E2.bed.gz", "GSM5373132_MCF7_p300_Ctrl.bed.gz", "GSM5373140_MCF7_p300_KD_E2.bed.gz", "GSM5373145_MCF7_CBP_KD_Ctrl.bed.gz", "GSM5373122_MCF7_Pol2_Ctrl.bed.gz", "GSM5373138_MCF7_Mau2_KD_E2.bed.gz", "GSM5373143_MCF7_Pol2ser2_KD_Ctrl.bed.gz", "GSM5373115_MCF7_CBP_E2.bed.gz", "GSM5373126_MCF7_Pol2ser2_E2.bed.gz", "GSM5373146_MCF7_CBP_KD_E2.bed.gz", "GSM5373131_MCF7_TAF1_E2.bed.gz"], "293T cell line": ["GSM5373149_293T_Rad21_WT.bed.gz"], "Bcell": ["GSM5373150_Bcell_Rad21_WT.bed.gz"], "Healthy Fibroblast": ["GSM5373191_Fibroblast_Pol2ser5_Normal.bed.gz", "GSM5373151_Fibroblast_Rad21_WT.bed.gz", "GSM5373185_Fibroblast_NIPBL_Normal.bed.gz", "GSM5373182_Fibroblast_H3K27ac_Normal.bed.gz", "GSM5373188_Fibroblast_Pol2_Normal.bed.gz", "GSM5373179_Fibroblast_AFF4_Normal.bed.gz", "GSM5373194_Fibroblast_Rad21_Normal.bed.gz"], "RPE1 cell line": ["GSM5373165_RPE_Pol2ser2_FBS-.bed.gz", "GSM5373171_RPE_K27ac.bed.gz", "GSM5373152_RPE_Rad21_WT.bed.gz", "GSM5373164_RPE_Pol2_FBS+.bed.gz", "GSM5373159_RPE_Rad21_FBS+DRB.bed.gz", "GSM5373155_RPE_Rad21_FBS-.bed.gz", "GSM5880300_New_RPE_Rad21_FBS+.peak.bed.gz", "GSM5373157_RPE_Rad21_DRB-.bed.gz", "GSM5373169_RPE_Med1_FBS-.bed.gz", "GSM5373163_RPE_Pol2_FBS-.bed.gz", "GSM5373156_RPE_Rad21_FBS+.bed.gz", "GSM5373162_RPE_CTCF.bed.gz", "GSM5880301_New_RPE_Rad21_FBS-.peak.bed.gz", "GSM5373158_RPE_Rad21_DRB+.bed.gz", "GSM5373170_RPE_Med1_FBS+.bed.gz", "GSM5373161_RPE_SA1_FBS+.bed.gz", "GSM5373160_RPE_SA1_FBS-.bed.gz", "GSM5373168_RPE_Mau2_FBS+.bed.gz", "GSM5373167_RPE_Mau2_FBS-.bed.gz", "GSM5373166_RPE_Pol2ser2_FBS+.bed.gz"], "HeLa cell line": ["GSM5373153_HeLa_Rad21_WT_rep1.bed.gz", "GSM5373154_HeLa_Rad21_WT_rep2.bed.gz"], "CdLS Fibroblast": ["GSM5373186_Fibroblast_Pol2_CdLS.bed.gz", "GSM5373189_Fibroblast_Pol2ser5_CdLS.bed.gz", "GSM5373180_Fibroblast_H3K27ac_CdLS.bed.gz", "GSM5373192_Fibroblast_Rad21_CdLS.bed.gz", "GSM5373177_Fibroblast_AFF4_CdLS.bed.gz", "GSM5373183_Fibroblast_NIPBL_CdLS.bed.gz"], "CHOPS Fibroblast": ["GSM5373190_Fibroblast_Pol2ser5_CHOPS.bed.gz", "GSM5373193_Fibroblast_Rad21_CHOPS.bed.gz", "GSM5373184_Fibroblast_NIPBL_CHOPS.bed.gz", "GSM5373181_Fibroblast_H3K27ac_CHOPS.bed.gz", "GSM5373187_Fibroblast_Pol2_CHOPS.bed.gz", "GSM5373178_Fibroblast_AFF4_CHOPS.bed.gz"], "HCC": ["GSM5597555_Huh7_H3K4me3_summits.bed.gz", "GSM5597557_Huh7_ATAC_summits.bed.gz", "GSM5621761_CUTTag_Huh7_PLRG1_summits.bed.gz", "GSM5621760_CUTTag_Huh7_DHX37_summits.bed.gz", "GSM5597552_HepG2_ATAC_summits.bed.gz", "GSM5597549_HepG2_H3K4me1_summits.bed.gz", "GSM5597566_H7_P300_summits.bed.gz", "GSM5597568_H7_NCOA3_summits.bed.gz", "GSM5597548_HepG2_H3K27ac_summits.bed.gz", "GSM5621758_ChIPseq_Huh7_siDHX37_H3K27ac_summits.bed.gz", "GSM5597567_H7_SP1_summits.bed.gz", "GSM5597554_Huh7_H3K4me1_summits.bed.gz", "GSM5597550_HepG2_H3K4me3_summits.bed.gz", "GSM5621756_ChIPseq_Huh7_siNC_H3K27ac_summits.bed.gz", "GSM5597553_Huh7_H3K27ac_summits.bed.gz"], "Day 5 differentiated human induced pluripotent stem cells": ["GSM6043950_C1_1_S9.narrowPeak.txt.gz", "GSM6043948_B2_2_S5.narrowPeak.txt.gz", "GSM6043949_B3_2_S4.narrowPeak.txt.gz", "GSM6043951_C2_2_S8.narrowPeak.txt.gz", "GSM6043952_C3_2_S7.narrowPeak.txt.gz", "GSM6043954_M2_2_S2.narrowPeak.txt.gz", "GSM6043953_M1_1_S3.narrowPeak.txt.gz", "GSM6043955_M3_2_S1.narrowPeak.txt.gz", "GSM6043947_B1_2_S6.narrowPeak.txt.gz"], "Human trophoblast stem cells": ["GSM6043304_hTSC_CutRun_GATA3_peaks.bed.gz", "GSM6043300_hTSC_ChIP_H3K27ac_peaks.bed.gz", "GSM6043302_hTSC_ChIP_H3K4me3_peaks.bed.gz", "GSM6043308_hTSC_CutRun_TEAD4_peaks.bed.gz", "GSM6043309_hTSC_CutRun_TFAP2C_peaks.bed.gz", "GSM6043301_hTSC_ChIP_H3K4me1_peaks.bed.gz", "GSM6043306_hTSC_CutRun_H3K9me3_peaks.bed.gz", "GSM6043305_hTSC_CutRun_H3K27me3_peaks.bed.gz"], "U87 human glioma cell line": ["GSM5291625_RAG_F31_0008_P12_V11.narrowPeak.gz", "GSM5291620_RAG_F11_0003_P12_V11.narrowPeak.gz", "GSM5291624_RAG_F11_0007_P12_V11.narrowPeak.gz", "GSM5291621_RAG_F31_0004_P12_V11.narrowPeak.gz"], "Human naive CD4+ T cells polarized to Th17-fate for 72h": ["GSM5328659_FOSL2_R2_peaks.narrowPeak.gz", "GSM5328653_FOSL1_C-12_R1_peaks.narrowPeak.gz", "GSM5328651_BATF_R3_peaks.narrowPeak.gz", "GSM5328655_FOSL1_C-12_R2_peaks.narrowPeak.gz", "GSM5328657_FOSL2_R1_peaks.narrowPeak.gz", "GSM5328649_BATF_R1_peaks.narrowPeak.gz"], "tumor pericytes": ["GSM6008267_TCF21_peaks.narrowPeak.gz"], "Human embryonic kidney": ["GSM6008191_OGT_rep2.frag_bin.bed.gz", "GSM6008192_Dot1L_rep1.frag_bin.bed.gz", "GSM6008197_siDot1L-OGT_rep2.frag_bin.bed.gz", "GSM6008188_IgG_rep1.frag_bin.bed.gz", "GSM6008193_Dot1L_rep2.frag_bin.bed.gz", "GSM6008196_siDot1L-OGT_rep1.frag_bin.bed.gz", "GSM6008194_siNC-OGT_rep1.frag_bin.bed.gz", "GSM6008195_siNC-OGT_rep2.frag_bin.bed.gz", "GSM6008190_OGT_rep1.frag_bin.bed.gz", "GSM6008189_IgG_rep2.frag_bin.bed.gz"], "Primary human hepatocytes": ["GSM5611548_20200304_Donor2_H3K27AC_KL7876_S32_keepdup1_peaks.narrowPeak.bed.gz", "GSM5611543_Primary_hepatocytes_ATAC_seq_MACS2.bed.gz", "GSM5611547_20200304_AQL_H3K27AC_KL7876_S31_keepdup1_peaks.narrowPeak.bed.gz"], "2D hPSC-differentiated hepatocytes-like cells": ["GSM5611549_20200304_HM_2D_20180906_H3K27AC_KL7876_S25_keepdup1_peaks.narrowPeak.bed.gz", "GSM5611550_20200304_HM_2D_2020_H3K27AC_KL7876_S26_keepdup1_peaks.narrowPeak.bed.gz", "GSM5611544_2D_PSC_hepatocytes_ATAC_seq_MACS2.bed.gz"], "3D hPSC-differentiated hepatocytes-like cells-S4": ["GSM5611545_3D_PSC_hepatocytes_ATAC_seq_MACS2.bed.gz", "GSM5611551_20191030_Hepatocytes_3D-H3K27AC_KL7532_S5_keepdup1_peaks.narrowPeak.bed.gz"], "3D hPSC-differentiated hepatocytes-like cells-S5": ["GSM5611552_20200304_HM_3D_2020_H3K27AC_KL7876_S27_keepdup1_peaks.narrowPeak.bed.gz"], "H1-ES cells": ["GSM5611553_H1_H3K27Ac_keepdup1_peaks.narrowPeak.bed.gz"], "Epithelial cells": ["GSM4151571_ChIP_seq_mH2A1_peaks.bed.gz", "GSM4151570_ChIP_seq_mH2A1.1_peaks.bed.gz"], "Castration Resistant Prostate Cancer (CRPC)": ["GSM5553085_16D-CRPC-3d-ENZ-AccDNA-peak.narrowPeak.gz", "GSM5862245_16D-CRPC-3d-ENZ-AccDNA-Rep2-peak.narrowPeak.gz", "GSM5553108_16D-CRPC-H3K27me3-ChIP-broad_peaks.broadPeak.gz", "GSM5553084_16D-CRPC-0d-ENZ-AccDNA-peak.narrowPeak.gz", "GSM5862248_16D-CRPC-3d-ENZ-AccDNA-Rep3-peak.narrowPeak.gz", "GSM5862249_16D-CRPC-10d-ENZ-AccDNA-Rep3-peak.narrowPeak.gz", "GSM5553086_16D-CRPC-10d-ENZ-AccDNA-peak.narrowPeak.gz", "GSM5862246_16D-CRPC-10d-ENZ-AccDNA-Rep2-peak.narrowPeak.gz", "GSM5862244_16D-CRPC-0d-ENZ-AccDNA-Rep2-peak.narrowPeak.gz", "GSM5862247_16D-CRPC-0d-ENZ-AccDNA-Rep3-peak.narrowPeak.gz"], "ENZ-resistant CRPC-NE": ["GSM5553089_42D-ENZR-shASCL1-AccDNA-peak.narrowPeak.gz", "GSM5553087_42D-ENZR-AccDNA-peak.narrowPeak.gz", "GSM5553106_42D-ENZR-shASCL1-EZH2-ChIP-broad_peaks.broadPeak.gz", "GSM5553101_42D-ENZR-ASCL1-ChIP-peak.narrowPeak.gz", "GSM5553105_42D-ENZR-shASCL1-H3K27me3-ChIP-broad_peaks.broadPeak.gz"], "Neuro Endocrine Prostate Cancer": ["GSM5553103_NCI-H660-ASCL1-ChIP-peak.narrowPeak.gz", "GSM5553088_NCI-H660-AccDNA-peak.narrowPeak.gz"], "fibroblast cells": ["GSM5566215_peaks.bed.gz"], "Neuroblastoma cells": ["GSM5835586_GNE987-10nM-H3K27ac_peaks.narrowPeak.gz"], "ASCs on the day of differentiation induction": ["GSM5605621_D0_LMNB1_Rep3_peaks.bed.gz", "GSM5605590_H3K4me1_T00_1_2_peaks.broadPeak.gz", "GSM5605583_H3K27ac_T00_1-2_peaks.narrowPeak.gz", "GSM5605630_H3K4me3_T00_1-2_peaks.narrowPeak.sorted.bed.gz", "GSM5605620_D0_LMNB1_Rep2_peaks.bed.gz"], "ASCs on 04 hours after adipogenic induction": ["GSM5605592_H3K4me1_T04_1_2_peaks.broadPeak.gz", "GSM5605631_H3K4me3_T04_1-2_peaks.narrowPeak.sorted.bed.gz", "GSM5605584_H3K27ac_T04_1-2_peaks.narrowPeak.gz"], "ASCs on 08 hours after adipogenic induction": ["GSM5605585_H3K27ac_T08_1-2_peaks.narrowPeak.gz", "GSM5605594_H3K4me1_T08_1_2_peaks.broadPeak.gz", "GSM5605632_H3K4me3_T08_1-2_peaks.narrowPeak.sorted.bed.gz"], "ASCs on 12 hours after adipogenic induction": ["GSM5605633_H3K4me3_T12_1-2_peaks.narrowPeak.sorted.bed.gz", "GSM5605586_H3K27ac_T12_1-2_peaks.narrowPeak.gz", "GSM5605596_H3K4me1_T12_1_2_peaks.broadPeak.gz"], "ASCs on 16 hours after adipogenic induction": ["GSM5605587_H3K27ac_T16_1-2_peaks.narrowPeak.gz", "GSM5605634_H3K4me3_T16_1-2_peaks.narrowPeak.sorted.bed.gz", "GSM5605598_H3K4me1_T16_1_2_peaks.broadPeak.gz"], "ASCs on 20 hours after adipogenic induction": ["GSM5605588_H3K27ac_T20_1-2_peaks.narrowPeak.gz", "GSM5605600_H3K4me1_T20_1_2_peaks.broadPeak.gz", "GSM5605635_H3K4me3_T20_1-2_peaks.narrowPeak.sorted.bed.gz"], "ASCs on 24 hours after adipogenic induction": ["GSM5605636_H3K4me3_T24_1-2_peaks.narrowPeak.sorted.bed.gz", "GSM5605623_D1_LMNB1_Rep3_peaks.bed.gz", "GSM5605602_H3K4me1_T24_1_2_peaks.broadPeak.gz", "GSM5605589_H3K27ac_T24_1-2_peaks.narrowPeak.gz", "GSM5605622_D1_LMNB1_Rep2_peaks.bed.gz"], "Proliferating adipose stem cells (ASCs) in growth medium": ["GSM5605619_Dm2_LMNB1_Rep2_peaks.bed.gz", "GSM5605618_Dm2_LMNB1_Rep1_peaks.bed.gz"], "ASCs on 72 hours after adipogenic induction": ["GSM5862377_T72_H3K27ac_peaks.narrowPeak.gz", "GSM5862380_T72_H3K4me1_peaks.broadPeak.gz", "GSM5605625_D3_LMNB1_Rep3_peaks.bed.gz", "GSM5862379_T72_H3K4me1_peaks.broadPeak.gz", "GSM5605624_D3_LMNB1_Rep2_peaks.bed.gz", "GSM5862378_T72_H3K4me3_peaks.narrowPeak.gz"], "Acute Myeloid leukemia cell line NB4": ["GSM5354434_OM_GFP1_S20_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354443_PAA1_S4_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz", "GSM5354438_OM_SH1_2_S23_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354437_OM_SH1_1_S19_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354433_PAA3_S27_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354432_PAA2_S21_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354435_OM_GFP2_S24_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354429_EFa_2_S22_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354444_PAA2_S5_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz", "GSM5354428_EFa_1_S18_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354448_NES3_S9_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz", "GSM5354446_NES1_S7_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz", "GSM5354439_OM_SH1_3_S25_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354447_NES2_S8_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz", "GSM5354440_EV1_S1_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz", "GSM5354445_PAA3_S6_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz", "GSM5354430_Efa_3_S28_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354436_OM_GFP3_S26_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354431_PAA1_S17_L001_R1_001.trim.merged.nodup.no_chrM_MT.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM5354441_EV2_S2_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz", "GSM5354442_EV3_S3_L002_R1_001.nodup.pval0.01.500K.bfilt.narrowPeak.gz"], "epithelial-like": ["GSM4140479_ag_008_01_01_chipseq_peaks.narrowPeak.gz", "GSM4140480_ag_009_01_01_chipseq_peaks.narrowPeak.gz", "GSM4140478_ag_007_01_01_chipseq_peaks.narrowPeak.gz"], "adult human dermal fibroblast": ["GSM5725001_PIB-HDFs-IRF8_hg38_rep2.bed.gz", "GSM5725002_PIB-HDFs-BATF3_hg38_rep2.bed.gz", "GSM5704555_PIB-HDFs_IRF8_hg38.bed.gz", "GSM5704559_BATF3-HDFs_BATF3_hg38.bed.gz", "GSM5725000_PIB-HDFs-PU-1_hg38_rep2.bed.gz", "GSM5704558_IRF8-HDFs_IRF8_hg38.bed.gz", "GSM5704554_PIB-HDFs_PU-1_hg38.bed.gz", "GSM5704557_PU-1-HDFs_PU-1_hg38.bed.gz", "GSM5704556_PIB-HDFs_BATF3_hg38.bed.gz"], "ER-/PR- IBC": ["GSM5258444_EM2.idr0.01.bfilt.narrowPeak.gz", "GSM5258445_EM1.idr0.01.bfilt.narrowPeak.gz", "GSM5258440_M1.idr0.01.bfilt.narrowPeak.gz", "GSM5258441_M2.idr0.01.bfilt.narrowPeak.gz", "GSM5258446_Parental.idr0.01.bfilt.narrowPeak.gz", "GSM5258442_E.idr0.01.bfilt.narrowPeak.gz", "GSM5258443_EM3.idr0.01.bfilt.narrowPeak.gz"], "A375 melanoma cells": ["GSM4832132_ChIP_JUNB_352_peaks.bed.gz", "GSM4832134_ChIP_JUNB_353_peaks.bed.gz"], "Human primordial germ cell-like cells": ["GSM4836898_SOX17_hPGCLC_r3_peaks.narrowPeak.gz", "GSM4836897_SOX17_hPGCLC_r1_peaks.narrowPeak.gz", "GSM4836894_PRDM1_hPGCLC_r2_peaks.narrowPeak.gz", "GSM4836893_PRDM1_hPGCLC_r1_peaks.narrowPeak.gz"], "Definitive endoderm": ["GSM4836896_SOX17_hDE_r2_peaks.narrowPeak.gz", "GSM4836895_SOX17_hDE_r1_peaks.narrowPeak.gz"], "Castration resistant Prostate Cancer": ["GSM5465771_DU-145_Doxplus_r2_peaks.narrowPeak.gz", "GSM5465769_DU-145_Doxminus_r3_peaks.narrowPeak.gz", "GSM5465767_DU-145_Doxminus_r1_peaks.narrowPeak.gz", "GSM5465770_DU-145_Doxplus_r1_peaks.narrowPeak.gz", "GSM5465768_DU-145_Doxminus_r2_peaks.narrowPeak.gz", "GSM5465772_DU-145_Doxplus_r3_peaks.narrowPeak.gz"], "Triple Negative Breast Cancer": ["GSM5465773_BT549_Doxminus_r1_peaks.narrowPeak.gz", "GSM5465775_BT549_Doxminus_r3_peaks.narrowPeak.gz", "GSM5465777_BT549_Doxplus_r2_peaks.narrowPeak.gz", "GSM5465778_BT549_Doxplus_r3_peaks.narrowPeak.gz", "GSM5465776_BT549_Doxplus_r1_peaks.narrowPeak.gz", "GSM5465774_BT549_Doxminus_r2_peaks.narrowPeak.gz"], "CD4": ["GSM5136369_JCIp2.TAD.10kb_20kb.2D.bed.gz", "GSM5136370_JCIp3.TAD.10kb_20kb.2D.bed.gz", "GSM5136368_JCIp1.TAD.10kb_20kb.2D.bed.gz"], "Human primary fibroblasts [Coriell Cell Repository GM02639]": ["GSM5203046_PrimaryFibroblasts_recovery_fusion_A-B_coord.bed.gz", "GSM5203044_PrimaryFibroblasts_37C_fusion_A-B_coord.bed.gz", "GSM5203045_PrimaryFibroblasts_40C_fusion_A-B_coord.bed.gz"], "HEK293T": ["GSM5203047_CT_37C_fusion_A-B_coord.bed.gz", "GSM5203048_CT_42C_fusion_A-B_coord.bed.gz", "GSM5203053_TP53BP1_0.2kb_bin_cov_CT_exclusive.bed.gz", "GSM5203051_KD_42C_fusion_A-B_coord.bed.gz", "GSM5203049_CT_recovery_fusion_A-B_coord.bed.gz", "GSM5203052_KD_recovery_fusion_A-B_coord.bed.gz", "GSM5203054_TP53BP1_0.2kb_bin_cov_KD_exclusive.bed.gz", "GSM5203050_KD_37C_fusion_A-B_coord.bed.gz"], "Human monocytes": ["GSM5558271_2_MV130A_PBrandi_ATACSeq_S6.hg38_peaks.narrowPeak.gz", "GSM5558274_5_EtcC_PBrandi_ATACSeq_S9.hg38_peaks.narrowPeak.gz", "GSM5558275_6_MV130C_PBrandi_ATACSeq_S10.hg38_peaks.narrowPeak.gz", "GSM5558273_4_MV130B_PBrandi_ATACSeq_S8.hg38_peaks.narrowPeak.gz", "GSM5558270_1_EtcA_PBrandi_ATACSeq_S5.hg38_peaks.narrowPeak.gz", "GSM5558272_3_EtcB_PBrandi_ATACSeq_S7.hg38_peaks.narrowPeak.gz"], "H9 embryonic stem cell-derived cranial neural crest cell": ["GSM4909433_CNCC_Rep2_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz", "GSM4909460_CNCC_ATAC_100_bio3.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909432_CNCC_Rep1_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz", "GSM4909438_CNCC_Rep3_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz", "GSM4909430_CNCC_Rep1_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz", "GSM4909437_CNCC_Rep3_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz", "GSM4909436_CNCC_Rep3_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz", "GSM4909458_CNCC_ATAC_100_bio1.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909459_CNCC_ATAC_100_bio2.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909434_CNCC_Rep2_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz", "GSM4909431_CNCC_Rep1_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz", "GSM4909435_CNCC_Rep2_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz"], "H9 embryonic stem cells": ["GSM4909445_ESC_Rep3_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz", "GSM4909439_ESC_Rep1_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz", "GSM4909442_ESC_Rep2_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz", "GSM4909446_ESC_Rep3_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz", "GSM4909440_ESC_Rep1_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz", "GSM4909462_ESC_ATAC_50_bio2.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909443_ESC_Rep2_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz", "GSM4909461_ESC_ATAC_50_bio1.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909463_ESC_ATAC_50_bio4.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909444_ESC_Rep2_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz", "GSM4909447_ESC_Rep3_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz", "GSM4909441_ESC_Rep1_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz"], "H9 embryonic stem cell-derived neural stem cell": ["GSM4909450_NSC_Rep1_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz", "GSM4909464_NSC_ATAC_50_bio2.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909465_NSC_ATAC_50_bio3.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909457_NSC_Rep3b_and_3_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz", "GSM4909453_NSC_Rep2_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz", "GSM4909456_NSC_Rep3_3xBG4_rep4_hg38_broad_peaks.broadPeak.gz", "GSM4909466_NSC_ATAC_50_bio4.SLX-18056_SLX-18895.merged.sorted_peaks.narrowPeak.gz", "GSM4909452_NSC_Rep2_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz", "GSM4909455_NSC_Rep3_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz", "GSM4909449_NSC_Rep1_3xBG4_rep3_hg38_broad_peaks.broadPeak.gz", "GSM4909451_NSC_Rep2_3xBG4_rep1_hg38_broad_peaks.broadPeak.gz", "GSM4909454_NSC_Rep3_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz", "GSM4909448_NSC_Rep1_3xBG4_rep2_hg38_broad_peaks.broadPeak.gz"], "Human hepatic adenocarcinoma cell line": ["GSM3484231_ChIP_H3K27ac_shSMARCB1.bed.gz", "GSM3484229_ChIP_SMARCB1.bed.gz", "GSM3484230_ChIP_H3K27ac_shCon.bed.gz"], "iPSC": ["GSM5625732_WTC11-3_rep3.count.bed.gz", "GSM4494719_MACS_15491X03_FSHD_controlA_peaks.narrowPeak.gz", "GSM5625727_WTC11-1_rep1.count.bed.gz", "GSM4494720_MACS_15491X04_FSHD_controlB_peaks.narrowPeak.gz", "GSM4494724_MACS_15491X12_FSHDp53KO_controlB_peaks.narrowPeak.gz", "GSM4494721_MACS_15491X01_FSHD_doxo_A_peaks.narrowPeak.gz", "GSM4494723_MACS_15491X11_FSHDp53KO_controlA_peaks.narrowPeak.gz", "GSM4494726_MACS_15491X10_FSHDp53KO_doxoRB_peaks.narrowPeak.gz", "GSM4494725_MACS_15491X09_FSHDp53KO_doxoRA_peaks.narrowPeak.gz", "GSM5625731_WTC11-3_rep2.count.bed.gz", "GSM5625730_WTC11-3_rep1.count.bed.gz", "GSM4494722_MACS_15491X02_FSHD_doxo_A_peaks.narrowPeak.gz", "GSM5625728_WTC11-1_rep2.count.bed.gz", "GSM5625729_WTC11-1_rep3.count.bed.gz"], "Skin squamous cell carcinoma": ["GSM5345077_Input1-IP1.bed.gz", "GSM5345078_Input2-IP2.bed.gz"], "castration resistant prostate cancer cells": ["GSM5575321_V16D-Rep1-H3K27me3_peaks.broadPeak.gz", "GSM5575330_V16D-H19-Rep1-H3K27me3_peaks.broadPeak.gz", "GSM5575331_V16D-H19-Rep2-H3K27me3_peaks.broadPeak.gz", "GSM5575327_V16D-H19-Rep1-H3K4me3_peaks.narrowPeak.gz", "GSM5575332_V16D-H19-Rep3-H3K27me3_peaks.broadPeak.gz", "GSM5575320_V16D-Rep3-H3K4me3_peaks.narrowPeak.gz", "GSM5575319_V16D-Rep2-H3K4me3_peaks.narrowPeak.gz", "GSM5575329_V16D-H19-Rep3-H3K4me3_peaks.narrowPeak.gz", "GSM5575328_V16D-H19-Rep2-H3K4me3_peaks.narrowPeak.gz", "GSM5575323_V16D-Rep3-H3K27me3_peaks.broadPeak.gz", "GSM5575322_V16D-Rep2-H3K27me3_peaks.broadPeak.gz", "GSM5575318_V16D-Rep1-H3K4me3_peaks.narrowPeak.gz"], "prostate cancer cell line": ["GSM5155454_LNCaP-RESB_peaks.bed.gz", "GSM5155451_LNCaP-DMSO_peaks.bed.gz", "GSM5155453_LNCaP-RESA_peaks.bed.gz", "GSM5155452_LNCaP-ENZ48_peaks.bed.gz"], "Long-term hematopoietic stem cells (LT-HSC)": ["GSM4658372_LT_HSC_TFEB_OE_3.narrowPeak.gz", "GSM4658367_LT_HSC_GP91_1.narrowPeak.gz", "GSM4658369_LT_HSC_GP91_3.narrowPeak.gz", "GSM4658368_LT_HSC_GP91_2.narrowPeak.gz", "GSM4658371_LT_HSC_TFEB_OE_2.narrowPeak.gz", "GSM4658370_LT_HSC_TFEB_OE_1.narrowPeak.gz"], "ER+/FGFR1-amplified breast cancer cells": ["GSM4460125_macs2_ctrl_FGFR-rep2_peaks_peaks.narrowPeak.gz", "GSM4460127_macs2_ctrl-H3K27ac-rep1_peaks_peaks.narrowPeak.gz", "GSM4515957_macs2_MCF7_NLS_Rep1_peaks_peaks.narrowPeak.bed.gz", "GSM4460142_macs2_siFOXA1_FGFR-rep1_peaks_peaks.narrowPeak.gz", "GSM4460139_macs2_siNC_FGFR-rep1_peaks_peaks.narrowPeak.gz", "GSM4460130_macs2_ctrl_H3K4ME3-rep1_peaks_peaks.narrowPeak.gz", "GSM4460137_macs2_ctrl-FOXA2-rep2_peaks_peaks.narrowPeak.gz", "GSM4460128_macs2_ctrl-H3K27ac-rep2_peaks_peaks.narrowPeak.gz", "GSM4460143_macs2_siFOXA1_FGFR-rep2_peaks_peaks.narrowPeak.gz", "GSM4460140_macs2_siNC_FGFR-rep2_peaks_peaks.narrowPeak.gz", "GSM4460134_macs2_ctrl_RNAPOLII-rep2_peaks_peaks.narrowPeak.gz", "GSM4460136_macs2_ctrl-FOXA2-rep1_peaks_peaks.narrowPeak.gz", "GSM4460124_macs2_ctrl_FGFR-rep1_peaks_peaks.narrowPeak.gz", "GSM4515959_macs2_MCF7_NLS_Rep3_peaks_peaks.narrowPeak.bed.gz", "GSM4515958_macs2_MCF7_NLS_Rep2_peaks_peaks.narrowPeak.bed.gz", "GSM4460133_macs2_ctrl_RNAPOLII-rep1_peaks_peaks.narrowPeak.gz", "GSM4460131_macs2_ctrl_H3K4ME3-rep2_peaks_peaks.narrowPeak.gz"], "Fetal-liver derived hematopoietic stem and progenitor cells": ["GSM4859818_T21_G_GATA.MACS2.peaks.bed.gz", "GSM4859816_T21_Ctrl_GATA.MACS2.peaks.bed.gz", "GSM4859817_N_G_GATA.MACS2.peaks.bed.gz", "GSM4859815_N_Ctrl_GATA.MACS2.peaks.bed.gz"], "hPSC": ["GSM5121219_KLF4_naive_rep2.narrowPeak.gz", "GSM5121220_KLF4_primed.narrowPeak.gz", "GSM5121147_Naive_BRG1_WT.narrowPeak.gz", "GSM5121157_Primed_BRG1_HET.narrowPeak.gz", "GSM5121218_KLF4_naive_rep1.narrowPeak.gz", "GSM5121148_Naive_BRG1_HET.narrowPeak.gz", "GSM5121150_Naive_BRG1_KO_rep2.narrowPeak.gz", "GSM5121153_Re-Priming_BRG1_KO_rep1.narrowPeak.gz", "GSM5121155_Re-Priming_BRG1_KO_rep3.narrowPeak.gz", "GSM5121151_Re-Priming_BRG1_WT.narrowPeak.gz", "GSM5121149_Naive_BRG1_KO_rep1.narrowPeak.gz", "GSM5121154_Re-Priming_BRG1_KO_rep2.narrowPeak.gz", "GSM5121156_Primed_BRG1_WT.narrowPeak.gz", "GSM5121152_Re-Priming_BRG1_HET.narrowPeak.gz"], "fibrosarcoma cell line": ["GSM4656276_FUS-DDIT3-E_CTCF_narrow_Peaks.bed.gz", "GSM4656267_DDIT3-T-DDIT3_narrow_Peaks.bed.gz", "GSM4656270_EWS-FLI1-G_CTCF_narrow_Peaks.bed.gz", "GSM4656275_EWS-FLI1-HI-H3k27me3_broad_Peaks.bed.gz", "GSM4656286_WT-B-DDIT3_narrow_Peaks.bed.gz", "GSM4656280_FUS-DDIT3-E_DDIT3_narrow_Peaks.bed.gz", "GSM4656262_DDIT3-N_CTCF_narrow_Peaks.bed.gz", "GSM4656268_DDIT3-T-H3K27ac_broad_Peaks.bed.gz", "GSM4656269_DDIT3-T-H3K27me3_broad_Peaks.bed.gz", "GSM4656287_WT-C_DDIT3_narrow_Peaks.bed.gz", "GSM4656263_DDIT3-N_DDIT3_narrow_Peaks.bed.gz", "GSM4656278_FUS-DDIT3-D_H3K27ac_broad_Peaks.bed.gz", "GSM4656283_FUS-DDIT3-S-DDIT3_narrow_Peaks.bed.gz", "GSM4656277_FUS-DDIT3-S-CTCF_narrow_Peaks.bed.gz", "GSM4656289_WT-X-CTCF_narrow_Peaks.bed.gz", "GSM4656281_FUS-DDIT3-R-H3K27ac_broad_Peaks.bed.gz", "GSM4656272_EWS-FLI1-G_H3K27me3_broad_Peaks.bed.gz", "GSM4656282_FUS-DDIT3-R-H3K27me3_broad_Peaks.bed.gz", "GSM4656291_WT-X-H3K27me3_broad_Peaks.bed.gz", "GSM4656274_EWS-FLI1-HI-H3K27ac_broad_Peaks.bed.gz", "GSM4656279_FUS-DDIT3-D_H3K27me3_broad_Peaks.bed.gz", "GSM4656290_WT-X-H3K27ac_broad_Peaks.bed.gz", "GSM4656271_EWS-FLI1-G_H3K27ac_broad_Peaks.bed.gz", "GSM4656284_WT-A_CTCF_narrow_Peaks.bed.gz", "GSM4656273_EWS-FLI1-HI-CTCF_narrow_Peaks.bed.gz", "GSM4656265_DDIT3-O_H3K27me3_broad_Peaks.bed.gz", "GSM4656285_WT-A_H3K27me3_broad_Peaks.bed.gz", "GSM4656288_WT-C_H3K27ac_broad_Peaks.bed.gz", "GSM4656264_DDIT3-Z-H3K27ac_broad_Peaks.bed.gz", "GSM4656266_DDIT3-T-CTCF_narrow_Peaks.bed.gz"], "Embryonic stem cells": ["GSM5085770_XH124.bed.gz", "GSM5085769_XH123.bed.gz", "GSM4443751_ZM156.bed.gz", "GSM4443748_ZM124.bed.gz", "GSM4443750_ZM126.bed.gz", "GSM5085768_XH128.bed.gz", "GSM4443744_XH91.bed.gz", "GSM4443747_ZM123.bed.gz", "GSM4443749_ZM125.bed.gz", "GSM4443742_XH88.bed.gz"], "castration resistant prostate cancer": ["GSM5387840_LNCAP_sgKIF4A_1_narrow_peaks.bed.gz", "GSM5387843_LNCAP_sgNC_2_narrow_peaks.bed.gz", "GSM5387842_LNCAP_sgNC_1_narrow_peaks.bed.gz", "GSM5387839_C42B_sgNC_2_narrow_peaks.bed.gz", "GSM5387841_LNCAP_sgKIF4A_2_narrow_peaks.bed.gz", "GSM5387836_C42B_sgKIF4A_1_narrow_peaks.bed.gz", "GSM5387838_C42B_sgNC_1_narrow_peaks.bed.gz", "GSM5387837_C42B_sgKIF4A_2_narrow_peaks.bed.gz"], "hPSCs": ["GSM4495605_1-4_JARID2_S16_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz", "GSM4495606_3-4_JARID2_S22_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz"], "hiPSCs": ["GSM4497745_2-3_H3K27me3_S18_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_broad_peaks.broadPeak.gz", "GSM4497747_1-3_H3K27me3_S15_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_broad_peaks.broadPeak.gz", "GSM4497746_2-2_EED_S17_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz", "GSM4497744_3-2_EED_S20_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz", "GSM4497743_1-2_EED_S14_vsInput_MDRD_MQ40filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz", "GSM4497748_3-3_H3K27me3_S21_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_broad_peaks.broadPeak.gz"], "hESCs": ["GSM4498399_1-2_EED_S41_vsInput_S48_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz", "GSM4498400_3-2_EED_S43_vsInput_S48_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz"], "Prostate Cancer Cell Line": ["GSM5775768_LnCaP_unt_peaks.narrowPeak.gz", "GSM5775769_LnCaP_res_peaks.narrowPeak.gz", "GSM5775770_LnCaP_sen_peaks.narrowPeak.gz", "GSM4959453_moffitt_Untrt_peaks.narrowPeak.gz", "GSM4959454_moffitt_R9bMS_peaks.narrowPeak.gz"], "primary T cell": ["GSM5265326_BCL11B_E14259_peaks.narrowPeak.gz", "GSM5265325_BCL11B_E22952_peaks.narrowPeak.gz", "GSM5265324_BCL11B_E15804_peaks.narrowPeak.gz", "GSM5024540_SJTALL005006_BCL11B_rep1_peaks.narrowPeak.gz", "GSM5024541_SJTALL005006_BCL11B_rep2_peaks.narrowPeak.gz", "GSM5024539_SJTALL005006_H3K27ac_peaks.narrowPeak.gz"], "Colon cancer cells": ["GSM4733459_RKO_ATAC_DMSO_Rep3_Avg_val.bed.gz", "GSM4733458_RKO_ATAC_DMSO_Rep2_Avg_val.bed.gz", "GSM4733462_RKO_ATAC_APH_Rep3_Avg_val.bed.gz", "GSM4733460_RKO_ATAC_APH_Rep1_Avg_val.bed.gz", "GSM4733457_RKO_ATAC_DMSO_Rep1_Avg_val.bed.gz", "GSM4733461_RKO_ATAC_APH_Rep2_Avg_val.bed.gz"], "lymphoblast": ["GSM4676157_siBRG1_DRIPc-seq_W_strand_peaks_rep2.bed.gz", "GSM4676155_siC_DRIPc-seq_C_strand_peaks_rep1.bed.gz", "GSM4676156_siBRG1_DRIPc-seq_C_strand_peaks_rep1.bed.gz", "GSM4676156_siBRG1_DRIPc-seq_W_strand_peaks_rep1.bed.gz", "GSM4676157_siBRG1_DRIPc-seq_C_strand_peaks_rep2.bed.gz", "GSM4676155_siC_DRIPc-seq_W_strand_peaks_rep1.bed.gz"], "Human embryonic kidney cell": ["GSM4503590_MM381_HEK293T_XL_H3_3_EMDMillipore_peaks.narrowPeak.gz", "GSM4503589_MM380_HEK293T_XL_H2AZ_ABCAM_peaks.narrowPeak.gz", "GSM4503592_MM384_HEK293T_XL_H3K79me2_CST_peaks.narrowPeak.gz", "GSM4503591_MM383_HEK293T_XL_H4K16ac_CST_peaks.narrowPeak.gz", "GSM4503588_MM379_HEK293T_XL_H2AZ_CST_peaks.narrowPeak.gz"], "normal breast epithelium": ["GSM4614794_LIB180727LH_04_PBS_0_S59_L008.narrowPeak.gz", "GSM4614836_LIB180727LH_02_EGF_48_S28_L004.narrowPeak.gz", "GSM4614815_LIB180727LH_03_TGFb_24_S36_L005.narrowPeak.gz", "GSM4614817_LIB180727LH_02_TGFb_48_S43_L006.narrowPeak.gz", "GSM4614837_LIB180727LH_03_EGF_48_S49_L006.narrowPeak.gz", "GSM4614825_LIB180727LH_04_HGF_48_S56_L007.narrowPeak.gz", "GSM4614803_LIB180727LH_03_BMP2_24_S52_L007.narrowPeak.gz", "GSM4614816_LIB180727LH_04_TGFb_24_S31_L005.narrowPeak.gz", "GSM4614811_LIB180727LH_02_IFNg_48_S37_L005.narrowPeak.gz", "GSM4614822_LIB180727LH_04_HGF_24_S62_L008.narrowPeak.gz", "GSM4614828_LIB180727LH_04_OSM_24_S40_L005.narrowPeak.gz", "GSM4614806_LIB180727LH_03_BMP2_48_S33_L005.narrowPeak.gz", "GSM4614797_LIB180727LH_03_PBS_24_S29_L004.narrowPeak.gz", "GSM4614834_LIB180727LH_04_EGF_24_S21_L004.narrowPeak.gz", "GSM4614830_LIB180727LH_03_OSM_48_S46_L006.narrowPeak.gz", "GSM4614800_LIB180727LH_03_PBS_48_S25_L004.narrowPeak.gz", "GSM4614813_LIB180727LH_04_IFNg_48_S66_L008.narrowPeak.gz", "GSM4614808_LIB180727LH_02_IFNg_24_S57_L007.narrowPeak.gz", "GSM4614804_LIB180727LH_04_BMP2_24_S64_L008.narrowPeak.gz", "GSM4614801_LIB180727LH_04_PBS_48_S53_L007.narrowPeak.gz", "GSM4614807_LIB180727LH_04_BMP2_48_S67_L008.narrowPeak.gz", "GSM4614829_LIB180727LH_02_OSM_48_S63_L008.narrowPeak.gz", "GSM4614809_LIB180727LH_03_IFNg_24_S32_L005.narrowPeak.gz", "GSM4614796_LIB180727LH_02_PBS_24_S34_L005.narrowPeak.gz", "GSM4614823_LIB180727LH_02_HGF_48_S44_L006.narrowPeak.gz", "GSM4614835_LIB180727LH_01_EGF_24_S38_L005.narrowPeak.gz", "GSM4614805_LIB180727LH_02_BMP2_48_S47_L006.narrowPeak.gz", "GSM4614814_LIB180727LH_02_TGFb_24_S48_L006.narrowPeak.gz", "GSM4614810_LIB180727LH_04_IFNg_24_S45_L006.narrowPeak.gz", "GSM4614821_LIB180727LH_03_HGF_24_S39_L005.narrowPeak.gz", "GSM4614838_LIB180727LH_04_EGF_48_S61_L008.narrowPeak.gz", "GSM4614831_LIB180727LH_04_OSM_48_S27_L004.narrowPeak.gz", "GSM4614792_LIB180727LH_02_PBS_0_S41_L006.narrowPeak.gz", "GSM4614802_LIB180727LH_02_BMP2_24_S42_L006.narrowPeak.gz", "GSM4614824_LIB180727LH_03_HGF_48_S30_L004.narrowPeak.gz", "GSM4614795_LIB180727LH_01_PBS_0_S26_L004.narrowPeak.gz", "GSM4614826_LIB180727LH_02_OSM_24_S22_L004.narrowPeak.gz", "GSM4614820_LIB180727LH_02_HGF_24_S24_L004.narrowPeak.gz", "GSM4614839_LIB180727LH_01_EGF_48_S55_L007.narrowPeak.gz", "GSM4614833_LIB180727LH_03_EGF_24_S35_L005.narrowPeak.gz", "GSM4614812_LIB180727LH_03_IFNg_48_S23_L004.narrowPeak.gz", "GSM4614798_LIB180727LH_04_PBS_24_S65_L008.narrowPeak.gz", "GSM4614832_LIB180727LH_02_EGF_24_S58_L007.narrowPeak.gz", "GSM4614818_LIB180727LH_03_TGFb_48_S60_L007.narrowPeak.gz", "GSM4614827_LIB180727LH_03_OSM_24_S51_L007.narrowPeak.gz", "GSM4614793_LIB180727LH_03_PBS_0_S50_L006.narrowPeak.gz", "GSM4614799_LIB180727LH_02_PBS_48_S68_L008.narrowPeak.gz", "GSM4614819_LIB180727LH_04_TGFb_48_S54_L007.narrowPeak.gz"], "blood-derived monocytes": ["GSM4629479_H3K4me3_C1_HC_4.bam_peaks.broadPeak.gz", "GSM4629484_H3K4me3_C1_RA_4.bam_peaks.broadPeak.gz", "GSM4629486_H3K4me3_C1_RA_6.bam_peaks.broadPeak.gz", "GSM4629491_H3K4me3_C1_RA_11.bam_peaks.broadPeak.gz", "GSM4629477_H3K4me3_C1_HC_2.bam_peaks.broadPeak.gz", "GSM4629487_H3K4me3_C1_RA_7.bam_peaks.broadPeak.gz", "GSM4629482_H3K4me3_C1_RA_2.bam_peaks.broadPeak.gz", "GSM4629478_H3K4me3_C1_HC_3.bam_peaks.broadPeak.gz", "GSM4629483_H3K4me3_C1_RA_3.bam_peaks.broadPeak.gz", "GSM4629488_H3K4me3_C1_RA_8.bam_peaks.broadPeak.gz", "GSM4629480_H3K4me3_C1_HC_5.bam_peaks.broadPeak.gz", "GSM4629481_H3K4me3_C1_RA_1.bam_peaks.broadPeak.gz", "GSM4629476_H3K4me3_C1_HC_1.bam_peaks.broadPeak.gz", "GSM4629490_H3K4me3_C1_RA_10.bam_peaks.broadPeak.gz", "GSM4629489_H3K4me3_C1_RA_9.bam_peaks.broadPeak.gz", "GSM4629485_H3K4me3_C1_RA_5.bam_peaks.broadPeak.gz"], "Paediatric glioblastoma cell": ["GSM4974197_GBM002-P1C8_H3K36me3_1_peaks.broadPeak.gz", "GSM4974215_GBM002-P2D3-PBr-WT_H3K36me3_1_peaks.broadPeak.gz", "GSM4974211_GBM002-P2D3-PBr-G34R_v5-tag_1_peaks.broadPeak.gz", "GSM4974207_GBM002-P2D3-PBr-G34R_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974230_GBM002-Parental_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974226_GBM002-Parental_H3K27me3_2_peaks.broadPeak.gz", "GSM4974213_GBM002-P2D3-PBr-WT_H3K27me3_1_peaks.broadPeak.gz", "GSM4974223_GBM002-Parental_G34R_1_peaks.broadPeak.gz", "GSM4974214_GBM002-P2D3-PBr-WT_H3K27me3_2_peaks.broadPeak.gz", "GSM4974222_GBM002-P2D3-PBr-WT_v5-tag_2_peaks.broadPeak.gz", "GSM4974206_GBM002-P2D3-PBr-G34R_H3K36me3_2_peaks.broadPeak.gz", "GSM4974217_GBM002-P2D3-PBr-WT_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974212_GBM002-P2D3-PBr-G34R_v5-tag_2_peaks.broadPeak.gz", "GSM4974194_GBM002-P1C8_G34R_2_peaks.broadPeak.gz", "GSM4974199_GBM002-P1C8_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974200_GBM002-P1C8_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974205_GBM002-P2D3-PBr-G34R_H3K36me3_1_peaks.broadPeak.gz", "GSM4974203_GBM002-P2D3-PBr-G34R_H3K27me3_1_peaks.broadPeak.gz", "GSM4974198_GBM002-P1C8_H3K36me3_2_peaks.broadPeak.gz", "GSM4974196_GBM002-P1C8_H3K27me3_2_peaks.broadPeak.gz", "GSM4974216_GBM002-P2D3-PBr-WT_H3K36me3_2_peaks.broadPeak.gz", "GSM4974221_GBM002-P2D3-PBr-WT_v5-tag_1_peaks.broadPeak.gz", "GSM4974224_GBM002-Parental_G34R_2_peaks.broadPeak.gz", "GSM4974229_GBM002-Parental_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974208_GBM002-P2D3-PBr-G34R_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974204_GBM002-P2D3-PBr-G34R_H3K27me3_2_peaks.broadPeak.gz", "GSM4974195_GBM002-P1C8_H3K27me3_1_peaks.broadPeak.gz", "GSM4974218_GBM002-P2D3-PBr-WT_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974193_GBM002-P1C8_G34R_1_peaks.broadPeak.gz", "GSM4974225_GBM002-Parental_H3K27me3_1_peaks.broadPeak.gz", "GSM4974228_GBM002-Parental_H3K36me3_2_peaks.broadPeak.gz", "GSM4974227_GBM002-Parental_H3K36me3_1_peaks.broadPeak.gz"], "Cytotrophoblast": ["GSM5104917_Cytotrophoblast_vitD_H3K4me3-2.broadPeak.gz", "GSM5104912_Cytotrophoblast_vitD_H3K27ac-1.broadPeak.gz", "GSM5104916_Cytotrophoblast_vitD_H3K4me3-1.broadPeak.gz", "GSM5104910_Cytotrophoblast_control_H3K27ac-1.broadPeak.gz", "GSM5104913_Cytotrophoblast_vitD_H3K27ac-2.broadPeak.gz", "GSM5104911_Cytotrophoblast_control_H3K27ac-2.broadPeak.gz", "GSM5104914_Cytotrophoblast_control_H3K4me3-1.broadPeak.gz", "GSM5104915_Cytotrophoblast_control_H3K4me3-2.broadPeak.gz"], "human prostate cancer cells": ["GSM4891301_KLF4_DHT_rep1_peaks.narrowPeak.bed.gz", "GSM4891304_AR_V_rep2_peaks.narrowPeak.bed.gz", "GSM4891302_KLF4_DHT_rep2_peaks.narrowPeak.bed.gz", "GSM4891299_KLF4_V_rep1_peaks.narrowPeak.bed.gz", "GSM4891303_AR_V_rep1_peaks.narrowPeak.bed.gz", "GSM4891305_AR_DHT_rep1_peaks.narrowPeak.bed.gz", "GSM4891306_AR_DHT_rep2_peaks.narrowPeak.bed.gz", "GSM4891300_KLF4_V_rep2_peaks.narrowPeak.bed.gz"], "blood cell": ["GSM5066037_peak_SAM_01.narrowPeak.gz", "GSM5066033_peak_nonAct_03.narrowPeak.gz", "GSM5066039_peak_SAM_03.narrowPeak.gz", "GSM5066038_peak_SAM_02.narrowPeak.gz", "GSM5066032_peak_nonAct_02.narrowPeak.gz", "GSM5066036_peak_Act_03.narrowPeak.gz", "GSM5066034_peak_Act_01.narrowPeak.gz", "GSM5066040_peak_MTA_01.narrowPeak.gz", "GSM5066031_peak_nonAct_01.narrowPeak.gz", "GSM5066042_peak_MTA_03.narrowPeak.gz", "GSM5066041_peak_MTA_02.narrowPeak.gz", "GSM5066035_peak_Act_02.narrowPeak.gz"], "Patient-derived head and neck squamous cell carcinoma cell line": ["GSM4508630_Cal27_KO1.H3K27ac.narrowPeak.gz", "GSM4508636_Cal27_KO17.H3K27ac.narrowPeak.gz", "GSM4508648_Det562_KO1.H3K27ac.narrowPeak.gz", "GSM4508642_Det562.H3K27ac.narrowPeak.gz", "GSM4508654_Det562_KO2.H3K27ac.narrowPeak.gz", "GSM4508624_Cal27.H3K27ac.narrowPeak.gz", "GSM4508660_Det562_KO4.H3K27ac.narrowPeak.gz"], "triple-negative breast cancer cells": ["GSM4929585_MUT_AM.rep2_5foldpeaks.bed.gz", "GSM4929593_MUT_GE_FLAG.rep2_5foldpeaks.bed.gz", "GSM4929583_WT.rep2_5foldpeaks.bed.gz", "GSM4929588_WT_FLAG.rep1_5foldpeaks.bed.gz", "GSM4929589_WT_FLAG.rep2_5foldpeaks.bed.gz", "GSM4929584_MUT_AM.rep1_5foldpeaks.bed.gz", "GSM4929590_MUT_AM_FLAG.rep1_5foldpeaks.bed.gz", "GSM4929582_WT.rep1_5foldpeaks.bed.gz", "GSM4929586_MUT_GE.rep1_5foldpeaks.bed.gz", "GSM4929592_MUT_GE_FLAG.rep1_5foldpeaks.bed.gz", "GSM4929591_MUT_AM_FLAG.rep2_5foldpeaks.bed.gz", "GSM4929587_MUT_GE.rep2_5foldpeaks.bed.gz"], "HL-60": ["GSM5012243_HL60_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012242_HL60_Rep1_bATACseq_HomerPeaks.bed.gz"], "M0": ["GSM5012245_Mac_0hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012244_Mac_0hrs_Rep1_bATACseq_HomerPeaks.bed.gz"], "M1": ["GSM5012248_M1_6hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012251_M1_12hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012246_M1_3hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012253_M1_24hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012250_M1_12hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012247_M1_3hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012252_M1_24hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012249_M1_6hrs_Rep2_bATACseq_HomerPeaks.bed.gz"], "M2": ["GSM5012259_M2_12hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012280_M2_IRF7_KD_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012285_M2_ID2_KD_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012274_M2_Neg_Ctrl_KD_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012278_M2_IRF1_KD_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012260_M2_24hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012283_M2_IRF9_KD_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012279_M2_IRF1_KD_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012261_M2_24hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012256_M2_6hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012258_M2_12hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012277_M2_Pos_Ctrl_KD_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012254_M2_3hrs_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012284_M2_ID2_KD_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012282_M2_IRF9_KD_Rep1_bATACseq_HomerPeaks.bed.gz", "GSM5012275_M2_Neg_Ctrl_KD_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012255_M2_3hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012281_M2_IRF7_KD_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012257_M2_6hrs_Rep2_bATACseq_HomerPeaks.bed.gz", "GSM5012276_M2_Pos_Ctrl_KD_Rep1_bATACseq_HomerPeaks.bed.gz"], "Inducible SOX17 H9 ESC": ["GSM4159486_ATACseq_D4pDOXRep2.bed.gz", "GSM4159485_ATACseq_D4pDOXRep1.bed.gz", "GSM4159484_ATACseq_D4mDOXRep2.bed.gz", "GSM4159483_ATACseq_D4mDOXRep1.bed.gz"], "human monocyte-derived macrophages": ["GSM4955047_LSJ-A-C-H3K4me3.narrowPeak.gz", "GSM4955050_LSJ-B-D-H3K4me3.narrowPeak.gz", "GSM4955046_LSJ-A-C-H3K27ac.narrowPeak.gz", "GSM4955049_LSJ-B-D-H3K27ac.narrowPeak.gz"], "induced pluripotent stem cells (hiPSCs) differentiated into hepatocyte-like cells (HLCs)": ["GSM4513171_BIOCHIP_rep3.bed.gz", "GSM4513166_PETRI_rep1.bed.gz", "GSM4513168_PETRI_rep3.bed.gz", "GSM4513170_BIOCHIP_rep2.bed.gz", "GSM4513169_BIOCHIP_rep1.bed.gz", "GSM4513172_BIOCHIP_rep4.bed.gz", "GSM4513167_PETRI_rep2.bed.gz"], "Human CD14+ monocytes": ["GSM4819759_95_L.bed.gz", "GSM4819755_92_L.bed.gz", "GSM4819757_94_L.bed.gz", "GSM4819754_92_H.bed.gz", "GSM4819756_94_H.bed.gz", "GSM4819758_95_H.bed.gz"], "KHYG1 NK cell line": ["GSM4878494_KHYG1_DMSO_rep1.rep1_sorted_peaks.narrowPeak.gz", "GSM4878497_KHYG1_299_rep2.rep1_sorted_peaks.narrowPeak.gz", "GSM4878495_KHYG1_DMSO_rep2.rep1_sorted_peaks.narrowPeak.gz", "GSM4878496_KHYG1_299_rep1.rep1_sorted_peaks.narrowPeak.gz"], "hESC": ["GSM4875719_hES_shOTUD5_rep3-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875718_hES_shOTUD5_rep2-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875716_hES_shCTRL_rep3-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875715_hES_shCTRL_rep2-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875717_hES_shOTUD5_rep1-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875714_hES_shCTRL_rep1-pr.idr0.05.bfilt.narrowPeak.gz"], "stem cells - Neural_Conversion_day3": ["GSM4875724_NC3_shOTUD5_rep2-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875721_NC3_shCTRL_rep2-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875722_NC3_shCTRL_rep3-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875720_NC3_shCTRL_rep1-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875723_NC3_shOTUD5_rep1-pr.idr0.05.bfilt.narrowPeak.gz", "GSM4875725_NC3_shOTUD5_rep3-pr.idr0.05.bfilt.narrowPeak.gz"], "Primary Proximal Tubule Epithelial Cells": ["GSM4332081_RN084_peaks.narrowPeak.gz", "GSM4332077_RN080_peaks.narrowPeak.gz", "GSM4332075_RN078_peaks.narrowPeak.gz", "GSM4332078_RN081_peaks.narrowPeak.gz", "GSM4332076_RN079_peaks.narrowPeak.gz", "GSM4332074_RN077_peaks.narrowPeak.gz", "GSM4332079_RN082_peaks.narrowPeak.gz", "GSM4332080_RN083_peaks.narrowPeak.gz"], "tonsillar naive B cell": ["GSM4837473_NaiveB_B1_T1.ATACseq.narrowPeak.gz", "GSM4837475_NaiveB_B3_T1.ATACseq.narrowPeak.gz", "GSM4837474_NaiveB_B2_T1.ATACseq.narrowPeak.gz"], "tonsillar memory B cell": ["GSM4837476_MemoryB_B1_T1.ATACseq.narrowPeak.gz", "GSM4837478_MemoryB_B3_T1.ATACseq.narrowPeak.gz", "GSM4837477_MemoryB_B2_T1.ATACseq.narrowPeak.gz"], "tonsillar light zone germinal center B cells": ["GSM4837481_Lightzone_germ_B3_T1.ATACseq.narrowPeak.gz", "GSM4837479_Lightzone_germ_B1_T1.ATACseq.narrowPeak.gz", "GSM4837480_Lightzone_germ_B2_T1.ATACseq.narrowPeak.gz"], "tonsillar dark zone germinal center B cells": ["GSM4837483_Darkzone_germ_B2_T1.ATACseq.narrowPeak.gz", "GSM4837484_Darkzone_germ_B3_T1.ATACseq.narrowPeak.gz", "GSM4837482_Darkzone_germ_B1_T1.ATACseq.narrowPeak.gz"], "tonsillar plasma B cell": ["GSM4837485_Plasma_B1_T1.ATACseq.narrowPeak.gz", "GSM4837486_Plasma_B2_T1.ATACseq.narrowPeak.gz", "GSM4837487_Plasma_B3_T1.ATACseq.narrowPeak.gz"], "Liver CD49a+ NK cells": ["GSM4801588_BSF_0660_HCG27BBXY_2_Liver40_CD49a_pos_unstim_S55905_sorted_mq10.bed.gz", "GSM4801587_BSF_0660_HCG27BBXY_2_Liver40_CD49a_neg_unstim_S55907_sorted_mq10.bed.gz", "GSM4801590_BSF_0660_HCG27BBXY_2_Liver41_CD49a_pos_unstim_S55913_sorted_mq10.bed.gz", "GSM4801591_BSF_0660_HCG27BBXY_2_Liver39_CD45a_neg_stim_S55910_sorted_mq10.bed.gz", "GSM4801596_BSF_0660_HCG27BBXY_2_Liver41_CD49a_pos_stim_S55914_sorted_mq10.bed.gz", "GSM4801593_BSF_0660_HCG27BBXY_3_Liver40_CD49a_neg_stim_S55924_sorted_mq10.bed.gz", "GSM4801592_BSF_0660_HCG27BBXY_3_Liver39_CD49a_pos_stim_S55920_sorted_mq10.bed.gz", "GSM4801595_BSF_0660_HCG27BBXY_2_Liver41_CD49a_neg_stim_S55903_sorted_mq10.bed.gz", "GSM4801594_BSF_0660_HCG27BBXY_3_Liver40_CD49a_pos_stim_S55925_sorted_mq10.bed.gz", "GSM4801585_BSF_0660_HCG27BBXY_2_Liver39_CD45a_neg_unstim_S55909_sorted_mq10.bed.gz", "GSM4801586_BSF_0660_HCG27BBXY_3_Liver39_CD49a_pos_unstim_S55926_sorted_mq10.bed.gz", "GSM4801589_BSF_0660_HCG27BBXY_2_Liver41_CD49a_neg_unstim_S55908_sorted_mq10.bed.gz"], "peripheral blood mononuclear cells": ["GSM3520734_ETS1_NK_peaks.narrowPeak.gz"], "Human  nasopharyngeal carcinoma cells": ["GSM4796501_S18-EBNA2Con-H3K27ac-Rep1.bed.gz", "GSM4796502_S18-EBNA2Con-H3K27ac-Rep2.bed.gz", "GSM4796503_S18-EBNA2Dox10ug-H3K27ac-Rep1.bed.gz", "GSM4796504_S18-EBNA2Dox10ug-H3K27ac-Rep2.bed.gz", "GSM4796500_S18-Dox10ug-H3K27ac-Rep2.bed.gz", "GSM4796499_S18-Dox10ug-H3K27ac-Rep1.bed.gz"], "B cell line": ["GSM5426082_EBNA2-H3K27ac-Rep1.bed.gz", "GSM5426083_EBNA2-H3K27ac-Rep2.bed.gz", "GSM5426087_EBNA2-ATAC-Rep1_peaks.broadPeak.gz", "GSM5426085_SCNG-H3K27ac-Rep1.bed.gz", "GSM5426090_SCNG-ATAC-Rep2_peaks.broadPeak.gz", "GSM5426089_SCNG-ATAC-Rep1_peaks.broadPeak.gz", "GSM5426086_SCNG-H3K27ac-Rep2.bed.gz", "GSM5426088_EBNA2-ATAC-Rep2_peaks.broadPeak.gz"], "BEAS-2B": ["GSM4732799_NT-3.1Loop-H3.3_peaks.narrowPeak.gz", "GSM4732797_NT-H3.1-PolyA-H3.3_peaks.narrowPeak.gz", "GSM4732801_NT-Empty-H3.3_peaks.narrowPeak.gz", "GSM4732795_FH3.3-NT-H3.1-Loop_peaks.narrowPeak.gz", "GSM4732803_As-96h-H3.3_peaks.narrowPeak.gz", "GSM4732805_Ctrl-96h-H3.3_peaks.narrowPeak.gz", "GSM4732793_FH3.3-NT-Empty_peaks.narrowPeak.gz"], "Mononuclear cells": ["GSM4910551_12FMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910538_06MMDN_H3K04ME3_PEAKS.bed.bz2", "GSM4910549_12FMPN_H3K04ME1_PEAKS.bed.bz2", "GSM4910542_07FMDY_H3K04ME3_PEAKS.bed.bz2", "GSM4910539_06MMDN_H3K27ME3_PEAKS.bed.bz2", "GSM4910555_13MMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910537_06MMDN_H3K04ME1_PEAKS.bed.bz2", "GSM4910547_11MMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910558_18MMPN_H3K04ME3_PEAKS.bed.bz2", "GSM4910559_18MMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910546_11MMDN_H3K04ME3_PEAKS.bed.bz2", "GSM4910554_13MMPN_H3K04ME3_PEAKS.bed.bz2", "GSM4910545_11MMDN_H3K04ME1_PEAKS.bed.bz2", "GSM4910543_07FMDY_H3K27ME3_PEAKS.bed.bz2", "GSM4910553_13MMPN_H3K04ME1_PEAKS.bed.bz2", "GSM4910557_18MMPN_H3K04ME1_PEAKS.bed.bz2", "GSM4910550_12FMPN_H3K04ME3_PEAKS.bed.bz2", "GSM4910541_07FMDY_H3K04ME1_PEAKS.bed.bz2"], "CD34+ thymic subpopulation": ["GSM4083593_TH137_CD34_RUNX1.bed.gz"], "CD34+1a-7+ thymic subpopulation": ["GSM4083601_TH148_CD34pos_1aneg_7pos.bed.gz", "GSM4083602_TH149_CD34pos_1aneg_7pos.bed.gz"], "CD34+1a+ thymic subpopulation": ["GSM4083604_TH149_CD34pos_1apos.bed.gz", "GSM4083603_TH148_CD34pos_1apos.bed.gz"], "early cortical thymic subpopulation": ["GSM4083606_TH149_EC.bed.gz", "GSM4083605_TH148_EC.bed.gz"], "late cortical thymic subpopulation": ["GSM4083607_TH148_LC.bed.gz", "GSM4083608_TH149_LC.bed.gz"], "hESCs H9 cells": ["GSM4134962_ChIPseq_3-ARID1A-mm_S3_vs7Input_MACS2_q1e_2.narrowPeak.gz"], "T-ALL cell line": ["GSM4591425_KRPS_H3K27ac.bed.gz", "GSM4591427_PER2_RUNX2.narrowPeak.gz", "GSM4591428_PER_H3K27ac.bed.gz", "GSM4591424_KRPS_MF_RUNX2_peaks.narrowPeak.gz"], "chronic myeloid leukemia cell line": ["GSM4142032_KBM7_H3K4me3.narrowPeak.gz", "GSM4142031_KBM7_H3K27ac.narrowPeak.gz"], "primary lung fibroblasts": ["GSM4110236_ATAC_NLF_rep1.narrowPeak.txt.gz", "GSM4110238_ATAC_NLF_OE_rep1.narrowPeak.txt.gz", "GSM4110237_ATAC_NLF_rep2.narrowPeak.txt.gz", "GSM4110239_ATAC_NLF_OE_rep2.narrowPeak.txt.gz"], "CD34+ cells": ["GSM4079461_ATAC_Cord_d16_rep2.bed.gz", "GSM4079460_ATAC_Cord_d16_rep1.bed.gz", "GSM4079458_ATAC_Cord_d12_rep1.bed.gz", "GSM4079462_ATAC_Cord_d8_rep1.bed.gz", "GSM4079457_ATAC_Cord_d10_rep2.bed.gz", "GSM4079456_ATAC_Cord_d10_rep1.bed.gz", "GSM4079459_ATAC_Cord_d12_rep2.bed.gz"], "human embryonic stem cells (hESCs)": ["GSM3999734_H1hESC_GATA3_6h_ChIP_rep1_peaks.bed.gz", "GSM3999736_H1hESC_GATA3_6h_ChIP_rep2_peaks.bed.gz"], "iPSC-derived medium spiny neuron-like cells": ["GSM4289313_MACS2_callpeak_on_data_170_and_data_146_broad_Peaks.bed.gz", "GSM4289318_MACS2_callpeak_on_data_170_and_data_158_broad_Peaks.bed.gz", "GSM4289322_MACS2_callpeak_on_data_170_and_data_166_broad_Peaks.bed.gz", "GSM4289309_MACS2_callpeak_on_data_170_and_data_138_broad_Peaks.bed.gz", "GSM4289305_MACS2_callpeak_on_data_170_and_data_132_broad_Peaks.bed.gz", "GSM4289314_MACS2_callpeak_on_data_170_and_data_148_broad_Peaks.bed.gz", "GSM4289320_MACS2_callpeak_on_data_170_and_data_162_broad_Peaks.bed.gz", "GSM4289310_MACS2_callpeak_on_data_170_and_data_140_broad_Peaks.bed.gz", "GSM4289312_MACS2_callpeak_on_data_170_and_data_144_broad_Peaks.bed.gz", "GSM4289315_MACS2_callpeak_on_data_170_and_data_150_broad_Peaks.bed.gz", "GSM4289319_MACS2_callpeak_on_data_170_and_data_160_broad_Peaks.bed.gz", "GSM4289308_MACS2_callpeak_on_data_170_and_data_136_broad_Peaks.bed.gz", "GSM4289316_MACS2_callpeak_on_data_170_and_data_154_broad_Peaks.bed.gz", "GSM4289307_MACS2_callpeak_on_data_170_and_data_134_broad_Peaks.bed.gz", "GSM4289311_MACS2_callpeak_on_data_170_and_data_142_broad_Peaks.bed.gz", "GSM4289321_MACS2_callpeak_on_data_170_and_data_164_broad_Peaks.bed.gz", "GSM4289317_MACS2_callpeak_on_data_170_and_data_156_broad_Peaks.bed.gz"], "MCC tumor derived cell line": ["GSM4172937_LSD1i-2.bed.gz", "GSM4172936_LSD1i-1.bed.gz", "GSM4172940_Combo-1.bed.gz", "GSM4172934_Control-1.bed.gz", "GSM4172938_dBRD9-1.bed.gz", "GSM4172935_Control-2.bed.gz", "GSM4172941_Combo-2.bed.gz", "GSM4172939_dBRD9-2.bed.gz"], "Naive T lymphocytes": ["GSM4210413_CD3.T.cells_9927_2.narrowPeak.gz", "GSM4210411_CD3.T.cells_DMSO_3.narrowPeak.gz", "GSM4210409_CD3.T.cells_DMSO_1.narrowPeak.gz", "GSM4210412_CD3.T.cells_9927_1.narrowPeak.gz", "GSM4210414_CD3.T.cells_9927_3.narrowPeak.gz", "GSM4210410_CD3.T.cells_DMSO_2.narrowPeak.gz"], "WT_UN": ["GSM4103931_iPS_UN_Subtel_2q+4q+10q.bed.gz", "GSM4103935_iPS_UN_satellite_2.bed.gz", "GSM4103927_iPS_UN_Subtel_9p+Xq.bed.gz", "GSM4103932_iPS_UN_Subtel_2p.bed.gz", "GSM4103933_iPS_UN_Subtel_10qMulti.bed.gz", "GSM4103929_iPS_UN_Subtel_5p.bed.gz", "GSM4103934_iPS_UN_Subtel_10p+18p.bed.gz", "GSM4103930_iPS_UN_Subtel_4p.bed.gz", "GSM4103928_iPS_UN_Subtel_7q.bed.gz"], "patient_pR": ["GSM4103945_iPS_pR_old_Subtel_9p+Xq.bed.gz", "GSM4104061_FL_pR_Subtel_4p.bed.gz", "GSM4103942_iPS_pR_young_Subtel_10qMulti.bed.gz", "GSM4103943_iPS_pR_young_Subtel_10p+18p.bed.gz", "GSM4104085_Fibroblast_pR_Subtel_4p.bed.gz", "GSM4103941_iPS_pR_young_Subtel_2p.bed.gz", "GSM4103940_iPS_pR_young_Subtel_2q+4q+10q.bed.gz", "GSM4104065_FL_pR_Subtel_10p+18p.bed.gz", "GSM4103950_iPS_pR_old_Subtel_2p.bed.gz", "GSM4104064_FL_pR_Subtel_10qMulti.bed.gz", "GSM4103946_iPS_pR_old_Subtel_7q.bed.gz", "GSM4104087_Fibroblast_pR_Subtel_10p+18p.bed.gz", "GSM4104062_FL_pR_Subtel_2q+4q+10q.bed.gz", "GSM4104059_FL_pR_Subtel_7q.bed.gz", "GSM4103937_iPS_pR_young_Subtel_7q.bed.gz", "GSM4104058_FL_pR_Subtel_9p+Xq.bed.gz", "GSM4103938_iPS_pR_young_Subtel_5p.bed.gz", "GSM4103952_iPS_pR_old_Subtel_10p+18p.bed.gz", "GSM4104082_Fibroblast_pR_Subtel_9p+Xq.bed.gz", "GSM4103948_iPS_pR_old_Subtel_4p.bed.gz", "GSM4104063_FL_pR_Subtel_2p.bed.gz", "GSM4103936_iPS_pR_young_Subtel_9p+Xq.bed.gz", "GSM4103947_iPS_pR_old_Subtel_5p.bed.gz", "GSM4103951_iPS_pR_old_Subtel_10qMulti.bed.gz", "GSM4104083_Fibroblast_pR_Subtel_7q.bed.gz", "GSM4104086_Fibroblast_pR_Subtel_2p.bed.gz", "GSM4104084_Fibroblast_pR_Subtel_5p.bed.gz", "GSM4104060_FL_pR_Subtel_5p.bed.gz", "GSM4103944_iPS_pR_young_satellite_2.bed.gz", "GSM4103949_iPS_pR_old_Subtel_2q+4q+10q.bed.gz", "GSM4103939_iPS_pR_young_Subtel_4p.bed.gz"], "patient_pG": ["GSM4104102_pG-treat_Subtel_7q_OICR.bed.gz", "GSM4104107_pG-treat_Subtel_10p+18p_OICR.bed.gz", "GSM4103956_iPS_pG_Subtel_4p.bed.gz", "GSM4104088_Fibroblast_pG_Subtel_9p+Xq.bed.gz", "GSM4104097_pG-untreat_Subtel_4p_OICR.bed.gz", "GSM4104095_pG-untreat_Subtel_7q_OICR.bed.gz", "GSM4104104_pG-treat_Subtel_4p_OICR.bed.gz", "GSM4103957_iPS_pG_Subtel_2q+4q+10q.bed.gz", "GSM4104089_Fibroblast_pG_Subtel_7q.bed.gz", "GSM4104103_pG-treat_Subtel_5p_OICR.bed.gz", "GSM4104091_Fibroblast_pG_Subtel_4p.bed.gz", "GSM4104101_pG-treat_Subtel_9p+Xq_OICR.bed.gz", "GSM4104090_Fibroblast_pG_Subtel_5p.bed.gz", "GSM4103958_iPS_pG_Subtel_2p.bed.gz", "GSM4104106_pG-treat_Subtel_10q_2q+4q_OICR.bed.gz", "GSM4104094_pG-untreat_Subtel_9p+Xq_OICR.bed.gz", "GSM4103953_iPS_pG_Subtel_9p+Xq.bed.gz", "GSM4103959_iPS_pG_Subtel_10qMulti.bed.gz", "GSM4104093_Fibroblast_pG_Subtel_2p.bed.gz", "GSM4103961_iPS_pG_satellite_2.bed.gz", "GSM4104092_Fibroblast_pG_Subtel_10p+18p.bed.gz", "GSM4104099_pG-untreat_Subtel_10q_2q+4q_OICR.bed.gz", "GSM4103954_iPS_pG_Subtel_7q.bed.gz", "GSM4104098_pG-untreat_Subtel_2p_OICR.bed.gz", "GSM4104100_pG-untreat_Subtel_10p+18p_OICR.bed.gz", "GSM4104096_pG-untreat_Subtel_5p_OICR.bed.gz", "GSM4103960_iPS_pG_Subtel_10p+18p.bed.gz", "GSM4104105_pG-treat_Subtel_2p_OICR.bed.gz", "GSM4103955_iPS_pG_Subtel_5p.bed.gz"], "Corrected_pR_clone_7": ["GSM4104068_FL_cR7_Subtel_5p.bed.gz", "GSM4103966_iPS_cR7_+54p_Subtel_2q+4q+10q.bed.gz", "GSM4103972_iPS_cR7_+3p_Subtel_5p.bed.gz", "GSM4103965_iPS_cR7_+54p_Subtel_4p.bed.gz", "GSM4103975_iPS_cR7_+3p_Subtel_2p.bed.gz", "GSM4103985_iPS_cR7_+23p_Subtel_10qMulti.bed.gz", "GSM4103986_iPS_cR7_+23p_Subtel_10p+18p.bed.gz", "GSM4103963_iPS_cR7_+54p_Subtel_7q.bed.gz", "GSM4103971_iPS_cR7_+3p_Subtel_7q.bed.gz", "GSM4103983_iPS_cR7_+23p_Subtel_2q+4q+10q.bed.gz", "GSM4103967_iPS_cR7_+54p_Subtel_2p.bed.gz", "GSM4103962_iPS_cR7_+54p_Subtel_9p+Xq.bed.gz", "GSM4104066_FL_cR7_Subtel_9p+Xq.bed.gz", "GSM4103976_iPS_cR7_+3p_Subtel_10qMulti.bed.gz", "GSM4103982_iPS_cR7_+23p_Subtel_4p.bed.gz", "GSM4103970_iPS_cR7_+3p_Subtel_9p+Xq.bed.gz", "GSM4103979_iPS_cR7_+23p_Subtel_9p+Xq.bed.gz", "GSM4103977_iPS_cR7_+3p_Subtel_10p+18p.bed.gz", "GSM4103987_iPS_cR7_+23p_satellite_2.bed.gz", "GSM4104067_FL_cR7_Subtel_7q.bed.gz", "GSM4103984_iPS_cR7_+23p_Subtel_2p.bed.gz", "GSM4104072_FL_cR7_Subtel_10qMulti.bed.gz", "GSM4103980_iPS_cR7_+23p_Subtel_7q.bed.gz", "GSM4103978_iPS_cR7_+3p_satellite_2.bed.gz", "GSM4103968_iPS_cR7_+54p_Subtel_10qMulti.bed.gz", "GSM4104070_FL_cR7_Subtel_2q+4q+10q.bed.gz", "GSM4103964_iPS_cR7_+54p_Subtel_5p.bed.gz", "GSM4104073_FL_cR7_Subtel_10p+18p.bed.gz", "GSM4103969_iPS_cR7_+54p_Subtel_10p+18p.bed.gz", "GSM4103981_iPS_cR7_+23p_Subtel_5p.bed.gz", "GSM4103973_iPS_cR7_+3p_Subtel_4p.bed.gz", "GSM4103974_iPS_cR7_+3p_Subtel_2q+4q+10q.bed.gz", "GSM4104069_FL_cR7_Subtel_4p.bed.gz", "GSM4104071_FL_cR7_Subtel_2p.bed.gz"], "Corrected_pR_clone_35": ["GSM4104078_FL_cR35_Subtel_2q+4q+10q.bed.gz", "GSM4104012_iPS_cR35_+23p_Subtel_10p+18p.bed.gz", "GSM4103990_iPS_cR35_+44p_Subtel_5p.bed.gz", "GSM4104003_iPS_cR35_+3p_Subtel_10p+18p.bed.gz", "GSM4104008_iPS_cR35_+23p_Subtel_4p.bed.gz", "GSM4104002_iPS_cR35_+3p_Subtel_10qMulti.bed.gz", "GSM4103995_iPS_cR35_+44p_Subtel_10p+18p.bed.gz", "GSM4104006_iPS_cR35_+23p_Subtel_7q.bed.gz", "GSM4103999_iPS_cR35_+3p_Subtel_4p.bed.gz", "GSM4104013_iPS_cR35_+23p_satellite_2.bed.gz", "GSM4103988_iPS_cR35_+44p_Subtel_9p+Xq.bed.gz", "GSM4104010_iPS_cR35_+23p_Subtel_2p.bed.gz", "GSM4104009_iPS_cR35_+23p_Subtel_2q+4q+10q.bed.gz", "GSM4103991_iPS_cR35_+44p_Subtel_4p.bed.gz", "GSM4104001_iPS_cR35_+3p_Subtel_2p.bed.gz", "GSM4103996_iPS_cR35_+3p_Subtel_9p+Xq.bed.gz", "GSM4104076_FL_cR35_Subtel_5p.bed.gz", "GSM4103989_iPS_cR35_+44p_Subtel_7q.bed.gz", "GSM4104075_FL_cR35_Subtel_7q.bed.gz", "GSM4104005_iPS_cR35_+23p_Subtel_9p+Xq.bed.gz", "GSM4104004_iPS_cR35_+3p_satellite_2.bed.gz", "GSM4104074_FL_cR35_Subtel_9p+Xq.bed.gz", "GSM4103998_iPS_cR35_+3p_Subtel_5p.bed.gz", "GSM4103997_iPS_cR35_+3p_Subtel_7q.bed.gz", "GSM4104011_iPS_cR35_+23p_Subtel_10qMulti.bed.gz", "GSM4104081_FL_cR35_Subtel_10p+18p.bed.gz", "GSM4103994_iPS_cR35_+44p_Subtel_10qMulti.bed.gz", "GSM4104079_FL_cR35_Subtel_2p.bed.gz", "GSM4104080_FL_cR35_Subtel_10qMulti.bed.gz", "GSM4103992_iPS_cR35_+44p_Subtel_2q+4q+10q.bed.gz", "GSM4103993_iPS_cR35_+44p_Subtel_2p.bed.gz", "GSM4104007_iPS_cR35_+23p_Subtel_5p.bed.gz", "GSM4104000_iPS_cR35_+3p_Subtel_2q+4q+10q.bed.gz", "GSM4104077_FL_cR35_Subtel_4p.bed.gz"], "Corrected_pG_clone_50": ["GSM4104017_iPS_cG50_+3p_Subtel_4p.bed.gz", "GSM4104029_iPS_cG50_+23p_Subtel_10p+18p.bed.gz", "GSM4104016_iPS_cG50_+3p_Subtel_5p.bed.gz", "GSM4104021_iPS_cG50_+3p_Subtel_10p+18p.bed.gz", "GSM4104030_iPS_cG50_+23p_satellite_2.bed.gz", "GSM4104027_iPS_cG50_+23p_Subtel_2q+4q+10q.bed.gz", "GSM4104014_iPS_cG50_+3p_Subtel_9p+Xq.bed.gz", "GSM4104019_iPS_cG50_+3p_Subtel_2p.bed.gz", "GSM4104018_iPS_cG50_+3p_Subtel_2q+4q+10q.bed.gz", "GSM4104015_iPS_cG50_+3p_Subtel_7q.bed.gz", "GSM4104022_iPS_cG50_+3p_satellite_2.bed.gz", "GSM4104023_iPS_cG50_+23p_Subtel_9p+Xq.bed.gz", "GSM4104024_iPS_cG50_+23p_Subtel_7q.bed.gz", "GSM4104031_iPS_cG50_+23p_Subtel_2p.bed.gz", "GSM4104025_iPS_cG50_+23p_Subtel_5p.bed.gz", "GSM4104020_iPS_cG50_+3p_Subtel_10qMulti.bed.gz", "GSM4104026_iPS_cG50_+23p_Subtel_4p.bed.gz", "GSM4104028_iPS_cG50_+23p_Subtel_10qMulti.bed.gz"], "Corrected_pG_clone_13": ["GSM4104043_iPS_cG13_+23p_Subtel_5p.bed.gz", "GSM4104113_cG13-untreat_Subtel_10q_2q+4q_OICR.bed.gz", "GSM4104044_iPS_cG13_+23p_Subtel_4p.bed.gz", "GSM4104048_iPS_cG13_+23p_Subtel_10p+18p.bed.gz", "GSM4104120_cG13-treat_Subtel_10q_2q+4q_OICR.bed.gz", "GSM4104036_iPS_cG13_+3p_Subtel_2q+4q+10q.bed.gz", "GSM4104115_cG13-treat_Subtel_9p+Xq_OICR.bed.gz", "GSM4104116_cG13-treat_Subtel_7q_OICR.bed.gz", "GSM4104040_iPS_cG13_+3p_satellite_2.bed.gz", "GSM4104110_cG13-untreat_Subtel_5p_OICR.bed.gz", "GSM4104035_iPS_cG13_+3p_Subtel_4p.bed.gz", "GSM4104049_iPS_cG13_+23p_satellite_2.bed.gz", "GSM4104042_iPS_cG13_+23p_Subtel_7q.bed.gz", "GSM4104033_iPS_cG13_+3p_Subtel_7q.bed.gz", "GSM4104109_cG13-untreat_Subtel_7q_OICR.bed.gz", "GSM4104118_cG13-treat_Subtel_4p_OICR.bed.gz", "GSM4104038_iPS_cG13_+3p_Subtel_10qMulti.bed.gz", "GSM4104121_cG13-treat_Subtel_10p+18p_OICR.bed.gz", "GSM4104032_iPS_cG13_+3p_Subtel_9p+Xq.bed.gz", "GSM4104039_iPS_cG13_+3p_Subtel_10p+18p.bed.gz", "GSM4104108_cG13-untreat_Subtel_9p+Xq_OICR.bed.gz", "GSM4104046_iPS_cG13_+23p_Subtel_2p.bed.gz", "GSM4104117_cG13-treat_Subtel_5p_OICR.bed.gz", "GSM4104119_cG13-treat_Subtel_2p_OICR.bed.gz", "GSM4104111_cG13-untreat_Subtel_4p_OICR.bed.gz", "GSM4104114_cG13-untreat_Subtel_10p+18p_OICR.bed.gz", "GSM4104041_iPS_cG13_+23p_Subtel_9p+Xq.bed.gz", "GSM4104045_iPS_cG13_+23p_Subtel_2q+4q+10q.bed.gz", "GSM4104037_iPS_cG13_+3p_Subtel_2p.bed.gz", "GSM4104112_cG13-untreat_Subtel_2p_OICR.bed.gz", "GSM4104034_iPS_cG13_+3p_Subtel_5p.bed.gz", "GSM4104047_iPS_cG13_+23p_Subtel_10qMulti.bed.gz"], "Derived_from_UN_iPSCs_differentiated_at_p64": ["GSM4104052_FL_UN_Subtel_5p.bed.gz", "GSM4104053_FL_UN_Subtel_4p.bed.gz", "GSM4104050_FL_UN_Subtel_9p+Xq.bed.gz", "GSM4104057_FL_UN_Subtel_10p+18p.bed.gz", "GSM4104056_FL_UN_Subtel_10qMulti.bed.gz", "GSM4104054_FL_UN_Subtel_2q+4q+10q.bed.gz", "GSM4104055_FL_UN_Subtel_2p.bed.gz", "GSM4104051_FL_UN_Subtel_7q.bed.gz"], "iPSCs": ["GSM4072636_Subtelomeric_CpGs_UNp62_4x-100x_methylation.bed.gz", "GSM4072640_Subtelomeric_CpGs_cR35p60_4x-100x_methylation.bed.gz", "GSM4072639_Subtelomeric_CpGs_cR7p62_4x-100x_methylation.bed.gz", "GSM4072638_Subtelomeric_CpGs_pGp32_4x-100x_methylation.bed.gz", "GSM4072637_Subtelomeric_CpGs_pR_4x-100x_methylation.bed.gz", "GSM4072642_Subtelomeric_CpGs_cG50p30_4x-100x_methylation.bed.gz", "GSM4072641_Subtelomeric_CpGs_cG13p27_4x-100x_methylation.bed.gz"], "Leiomyosarcoma cells": ["GSM3882322_H3K27ac_DMSO_SKUT_peaks.narrowPeak.bz2", "GSM3882325_HDAC4_DMSO_SKUT_peaks.narrowPeak.bz2", "GSM3882323_H3K27ac_HDAC4KO_SKUT_peaks.narrowPeak.bz2", "GSM3882324_H3K27ac_HDAC9KO_SKUT_peaks.narrowPeak.bz2", "GSM3882327_MEF2D_DMSO_SKUT_peaks.narrowPeak.bz2", "GSM3882326_HDAC9_DMSO_SKUT_peaks.narrowPeak.bz2"], "Human iPSC derived myotubes": ["GSM3744437_03_day2_m2_summits.bed.gz", "GSM3744440_06_day2_m2_summits.bed.gz", "GSM3744435_01_day2_m2_summits.bed.gz", "GSM3744436_02_day2_m2_summits.bed.gz", "GSM3744438_04_day2_m2_summits.bed.gz", "GSM3744439_05_day2_m2_summits.bed.gz"], "multiple myeloma cell line": ["GSM3791755_NTKO2-2_H3K27ac_noinput_e6_peaks.bed.gz", "GSM3791759_NTKO_Rad21_rep1_noinput_e5_peaks.bed.gz", "GSM3791757_TKO2-1_H3K27ac_noinput_e6_peaks.bed.gz", "GSM3791751_7-TKO2-1_CTCF_noinput_peaks.bed.gz", "GSM3791753_KMS11_H3K27ac_noinput_e6_peaks.bed.gz", "GSM3791747_2-KMS_CTCF_noinput_peaks.bed.gz", "GSM3791750_6-TKO1-1_CTCF_noinput_peaks.bed.gz", "GSM3791749_5-NTKO2-2_CTCF_noinput_peaks.bed.gz", "GSM3791754_NTKO2-1_H3K27ac_noinput_e6_peaks.bed.gz", "GSM3791761_TKO_Rad21_rep1_noinput_e5_peaks.bed.gz", "GSM3791748_4-NTKO2-1_CTCF_noinput_peaks.bed.gz", "GSM3791762_TKO_Rad21_rep2_noinput_e5_peaks.bed.gz", "GSM3791758_TKO2-2_H3K27ac_noinput_e6_peaks.bed.gz", "GSM3791752_8-TKO2-2_CTCF_noinput_peaks.bed.gz", "GSM3791760_NTKO_Rad21_rep2_noinput_e5_peaks.bed.gz", "GSM3791756_TKO1_H3K27ac_noinput_e6_peaks.bed.gz"], "Epithelial": ["GSM3762925_Az3.cluster.bed.gz", "GSM3762923_Az1.cluster.bed.gz", "GSM3762926_B1.cluster.bed.gz", "GSM3762928_B3.cluster.bed.gz", "GSM3762927_B2.cluster.bed.gz", "GSM3762924_Az2.cluster.bed.gz"], "Human castrate-resistant prostate cancer cell line": ["GSM3566911_GATA2peaksR1.narrowPeak.gz", "GSM3566915_GATA2peaksR2.narrowPeak.gz", "GSM3566917_JQ1_GATA2peaksR2.narrowPeak.gz", "GSM3566913_JQ1_GATA2peaksR1.narrowPeak.gz"], "ER-/PR-": ["GSM3417113_yc_001_01_01_chipseq_peaks.narrowPeak.gz"], "ER+/PR+": ["GSM3417126_gv_072_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417120_fd_034_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417121_gv_001_02_01_chipseq_peaks.narrowPeak.gz", "GSM3417125_gv_071_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417127_gv_104_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417115_fd_024_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417118_fd_028_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417122_gv_003_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417132_rf_087_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417116_fd_025_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417128_gv_105_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417131_rf_086_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417114_fd_023_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417123_gv_004_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417117_fd_027_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417119_fd_033_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417124_gv_005_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417129_gv_114_01_01_chipseq_peaks.narrowPeak.gz", "GSM3417130_gv_115_01_01_chipseq_peaks.narrowPeak.gz"], "monocyte derived macrophage": ["GSM3324464_Human7_Pol2_mock_24h_regions.bed.gz", "GSM3324485_Human10_Pol2_ZIKVneg_24h_regions.bed.gz", "GSM3324470_Human7_H3K27ac_ZIKVpos_24h_regions.bed.gz", "GSM3324466_Human7_Pol2_ZIKVpos_24h_regions.bed.gz", "GSM3324473_Human8_H3K27ac_ZIKVneg_24h_regions.bed.gz", "GSM3324465_Human7_Pol2_ZIKVneg_24h_regions.bed.gz", "GSM3324478_Human10_CTCF_mock_24h_peaks.bed.gz", "GSM3324463_Human6_Pol2_ZIKVpos_24h_regions.bed.gz", "GSM3324462_Human6_Pol2_ZIKVneg_24h_regions.bed.gz", "GSM3324468_Human7_H3K27ac_mock_24h_regions.bed.gz", "GSM3324486_Human10_Pol2_ZIKVpos_24h_regions.bed.gz", "GSM3324475_Human9_H3K27ac_mock_24h_regions.bed.gz", "GSM3324480_Human10_CTCF_ZIKVpos_24h_peaks.bed.gz", "GSM3324479_Human10_CTCF_ZIKVneg_24h_peaks.bed.gz", "GSM3324469_Human7_H3K27ac_ZIKVneg_24h_regions.bed.gz", "GSM3324476_Human9_H3K27ac_ZIKVneg_24h_regions.bed.gz", "GSM3324461_Human6_Pol2_mock_24h_regions.bed.gz", "GSM3324484_Human10_Pol2_mock_24h_regions.bed.gz", "GSM3324472_Human8_H3K27ac_mock_24h_regions.bed.gz", "GSM3324474_Human8_H3K27ac_ZIKVpos_24h_regions.bed.gz", "GSM3324477_Human9_H3K27ac_ZIKVpos_24h_regions.bed.gz"], "THP-1": ["GSM3330435_TRP47-1_Serum_peaks.narrowPeak.gz"], "Immortalised osteosarcoma cells": ["GSM3104132_NONO_2_U2OS_C6GR9ANXX_AGTTCC_L007_HRR0000003_R1.fastq.noadapt_m20_q2020.hg38_bowtie_v1_m1.filtered.sam.collapsed.PARalyzer_result.bed.all.bed.gz", "GSM3104133_SFPQ_2_U2OS_C6GR9ANXX_GTCCGC_L007_HRR0000007_R1.fastq.noadapt_m20_q2020.hg38_bowtie_v1_m1.filtered.sam.collapsed.PARalyzer_result.bed.all.bed.gz"], "Immortalised cervical cancer cells": ["GSM3104134_NONO_HeLa_2014_C5N7WANXX_CTATAC_L008_HRR0000005_R1.fastq.noadapt_m20_q2020.hg38_bowtie_v1_m1.filtered.sam.collapsed.PARalyzer_result.bed.all.bed.gz", "GSM3104135_SFPQ_HeLa_2014_C5N7WANXX_CTCAGA_L008_HRR0000009_R1.fastq.noadapt_m20_q2020.hg38_bowtie_v1_m1.filtered.sam.collapsed.PARalyzer_result.bed.all.bed.gz"], "primordial germ cell": ["GSM2966972_13W_male_keep.rpkm3.bed.gz", "GSM2966981_21W_male_keep.rpkm3.bed.gz", "GSM2966980_21W_female_keep.rpkm3.bed.gz", "GSM2966960_8W_male_keep.rpkm3.bed.gz", "GSM2966970_12W_female_keep.rpkm3.bed.gz", "GSM2966976_15W_female_keep.rpkm3.bed.gz", "GSM2966964_10W_female_keep.rpkm3.bed.gz"], "gonad somatic cell": ["GSM2966968_11W_male_soma.rpkm3.bed.gz", "GSM2966962_8W_male_soma.rpkm3.bed.gz", "GSM2966974_13W_male_soma.rpkm3.bed.gz", "GSM2966966_10W_female_soma.rpkm3.bed.gz", "GSM2966978_15W_female_soma.rpkm3.bed.gz"], "Embryonic stem cells (ESC)": ["GSM2845448_ESC_Rep1_500KB_bins.bed.gz", "GSM2845449_ESC_Rep2_DI_TADs.bed.gz", "GSM2845448_ESC_Rep1_DI_TADs.bed.gz", "GSM2845469_ESC_Rep2_MACS_peaks.narrowPeak.gz", "GSM2845468_ESC_Rep1_MACS_peaks.narrowPeak.gz", "GSM2845449_ESC_Rep2_500KB_bins.bed.gz"], "mesodermal cells (MES)": ["GSM2845451_MES_Rep2_500KB_bins.bed.gz", "GSM2845450_MES_Rep1_500KB_bins.bed.gz", "GSM2845471_MES_Rep2_MACS_peaks.narrowPeak.gz", "GSM2845451_MES_Rep2_DI_TADs.bed.gz", "GSM2845450_MES_Rep1_DI_TADs.bed.gz", "GSM2845470_MES_Rep1_MACS_peaks.narrowPeak.gz"], "cardiac progenitor (CP)": ["GSM2845452_CP_Rep1_DI_TADs.bed.gz", "GSM2845452_CP_Rep1_500KB_bins.bed.gz", "GSM2845472_CP_Rep1_MACS_peaks.narrowPeak.gz", "GSM2845453_CP_Rep2_500KB_bins.bed.gz", "GSM2845473_CP_Rep2_MACS_peaks.narrowPeak.gz", "GSM2845453_CP_Rep2_DI_TADs.bed.gz"], "cardiomyocyte (CM)": ["GSM2845455_CM_Rep2_500KB_bins.bed.gz", "GSM2845454_CM_Rep1_DI_TADs.bed.gz", "GSM2845475_CM_Rep2_MACS_peaks.narrowPeak.gz", "GSM2845474_CM_Rep1_MACS_peaks.narrowPeak.gz", "GSM2845455_CM_Rep2_DI_TADs.bed.gz", "GSM2845454_CM_Rep1_500KB_bins.bed.gz"], "Post-mitotic differentiated muscle cells (myotubes)": ["GSM2356705_annotated_peaks_TRF2.bed.gz", "GSM2356704_annotated_peaks_shTRF2.bed.gz", "GSM2356706_annotated_peaks_Empty.bed.gz", "GSM2356703_annotated_peaks_shScramble.bed.gz"], "T-Acute Lymphoblastic Leukemia patient derived cell line (T-ALL1)": ["GSM2793825_TALL1.DK27Ac_summits.bed.gz", "GSM2793827_TALL1.N3.DMSO_summits.bed.gz", "GSM2793826_TALL1.GK27Ac_summits.bed.gz", "GSM2793828_TALL1.N3.GSI_summits.bed.gz"], "primary DIPG tumor cell line": ["GSM2266131_DIPG_DIPG012_K27M_DMSO_H3K27me3.bed.gz", "GSM2266135_DIPG_SF8628_K27M_DMSO_H3K27me3.bed.gz", "GSM2266133_DIPG_SF7761_K27M_DMSO_H3K27me3.bed.gz", "GSM2266129_DIPG_DIPG007_K27M_DMSO_H3K27me3.bed.gz"], "human chronic lymphocytic leukemia B cells": ["GSM2059331_HTGTS_MEC1.Ibrutinib.C1_1.bed.gz", "GSM2059322_HTGTS_MEC1.DMSO.C2_2.bed.gz", "GSM2059330_HTGTS_MEC1.Duvelisib.C2_4.bed.gz", "GSM2059327_HTGTS_MEC1.Duvelisib.C1_1.bed.gz", "GSM2430310_HTGTS_MEC1.KO-Idelalisib.C1_1.bed.gz", "GSM2059326_HTGTS_MEC1.Idelalisib.C2_4.bed.gz", "GSM2059329_HTGTS_MEC1.Duvelisib.C2_3.bed.gz", "GSM2059333_HTGTS_MEC1.Ibrutinib.C3_3.bed.gz", "GSM2059323_HTGTS_MEC1.Idelalisib.C1_1.bed.gz", "GSM2430309_HTGTS_MEC1.KO-DMSO.C2_3.bed.gz", "GSM2430315_HTGTS_MEC1.KO-Duvelisib.C2_3.bed.gz", "GSM2430305_HTGTS_MEC1.Duvelisib.C1_5.bed.gz", "GSM2059332_HTGTS_MEC1.Ibrutinib.C1_2.bed.gz", "GSM2430311_HTGTS_MEC1.KO-Idelalisib.C1_2.bed.gz", "GSM2059324_HTGTS_MEC1.Idelalisib.C1_2.bed.gz", "GSM2059325_HTGTS_MEC1.Idelalisib.C2_3.bed.gz", "GSM2430312_HTGTS_MEC1.KO-Idelalisib.C2_3.bed.gz", "GSM2430306_HTGTS_MEC1.Duvelisib.C2_6.bed.gz", "GSM2059328_HTGTS_MEC1.Duvelisib.C1_2.bed.gz", "GSM2059334_HTGTS_MEC1.Ibrutinib.C2_4.bed.gz", "GSM2430313_HTGTS_MEC1.KO-Duvelisib.C1_1.bed.gz", "GSM2430307_HTGTS_MEC1.KO-DMSO.C1_1.bed.gz", "GSM2430314_HTGTS_MEC1.KO-Duvelisib.C1_2.bed.gz", "GSM2059321_HTGTS_MEC1.DMSO.C1_1.bed.gz", "GSM2430308_HTGTS_MEC1.KO-DMSO.C1_2.bed.gz"], "human mantle cell lymphoma B cells": ["GSM2059343_HTGTS_JeKo-1.Idelalisib.C2_5.bed.gz", "GSM2059341_HTGTS_JeKo-1.Idelalisib.C2_3.bed.gz", "GSM2059337_HTGTS_JeKo-1.DMSO.C2_3.bed.gz", "GSM2059349_HTGTS_JeKo-1.Duvelisib.C2_5.bed.gz", "GSM2059352_HTGTS_JeKo-1.Ibrutinib.C2_3.bed.gz", "GSM2059335_HTGTS_JeKo-1.DMSO.C1_1.bed.gz", "GSM2059342_HTGTS_JeKo-1.Idelalisib.C2_4.bed.gz", "GSM2059339_HTGTS_JeKo-1.Idelalisib.C1_1.bed.gz", "GSM2059344_HTGTS_JeKo-1.Idelalisib.C2_6.bed.gz", "GSM2059347_HTGTS_JeKo-1.Duvelisib.C2_3.bed.gz", "GSM2059346_HTGTS_JeKo-1.Duvelisib.C1_2.bed.gz", "GSM2059348_HTGTS_JeKo-1.Duvelisib.C2_4.bed.gz", "GSM2059350_HTGTS_JeKo-1.Ibrutinib.C1_1.bed.gz", "GSM2059340_HTGTS_JeKo-1.Idelalisib.C1_2.bed.gz", "GSM2059338_HTGTS_JeKo-1.DMSO.C2_4.bed.gz", "GSM2059345_HTGTS_JeKo-1.Duvelisib.C1_1.bed.gz", "GSM2059336_HTGTS_JeKo-1.DMSO.C1-2_1.bed.gz", "GSM2059351_HTGTS_JeKo-1.Ibrutinib.C1_2.bed.gz"], "iPS-derived neural progenitor cells": ["GSM2230419_NS_h3k9me3.broad.bed.gz", "GSM2230418_NS_Trim28.peaks.bed.gz"], "neural cells": ["GSM1898102_SATB1_Control_minus_Control_input.bed.gz", "GSM1898101_ChAT_AB_minus_AB_input.bed.gz", "GSM1898100_ChAT_Control_minus_Control_input.bed.gz", "GSM1898103_SATB1_AB_minus_AB_input.bed.gz"]}, "cell_line": {"SNU638": ["GSM6203247_snu638.peak.bed.gz"], "MCF7": ["GSM6125888_s118a-2_VG-3_S199.bed.gz", "GSM4520699_REP2_10NAC_0Gy.clean.umi_dedup.aggregated.bed.gz", "GSM6125841_CE-G_merge.bed.gz", "GSM6125883_s118a-2_EG-1_S194.bed.gz", "GSM6125893_WT_VG-2_S205.bed.gz", "GSM5501246_SINAH10.cellranger.peak.bed.gz", "GSM6125884_s118a-2_EG-2_S195.bed.gz", "GSM6125889_WT_EG-1_S201.bed.gz", "GSM6125892_WT_VG-1_S204.bed.gz", "GSM6125846_CV-ER_merge.bed.gz", "GSM4520702_REP3_0NAC_10Gy.clean.umi_dedup.aggregated.bed.gz", "GSM6125844_CE-SC_merge.bed.gz", "GSM6125868_GV-ER_merge.bed.gz", "GSM6125885_s118a-2_EG-3_S196.bed.gz", "GSM6125891_WT_EG-3_S203.bed.gz", "GSM4520694_REP1_0NAC_10Gy.clean.umi_dedup.aggregated.bed.gz", "GSM3440914_WT_H3K9me3_ChIPSeq_peaks.bed.gz", "GSM3440915_shKDM4B_H3K9me3_ChIPSeq_peaks.bed.gz", "GSM3440916_KDM4B_H3K9me3_ChIPSeq_peaks.bed.gz", "GSM6125874_GV-SC_merge.bed.gz", "GSM6125880_s118a-1_VG-1_S191.bed.gz", "GSM6125886_s118a-2_VG-1_S197.bed.gz", "GSM6125890_WT_EG-2_S202.bed.gz", "GSM6125879_s118a-1_EG-3_S190.bed.gz", "GSM6125855_CV-IgG_merge.bed.gz", "GSM6125849_CV-G_merge.bed.gz", "GSM6125866_GE-SC_merge.bed.gz", "GSM4520701_REP3_0NAC_0Gy.clean.umi_dedup.aggregated.bed.gz", "GSM4520698_REP2_0NAC_10Gy.clean.umi_dedup.aggregated.bed.gz", "GSM6125877_s118a-1_EG-1_S188.bed.gz", "GSM6125858_CV-SC_merge.bed.gz", "GSM4520696_REP1_10NAC_10Gy.clean.umi_dedup.aggregated.bed.gz", "GSM4520695_REP1_10NAC_0Gy.clean.umi_dedup.aggregated.bed.gz", "GSM6125878_s118a-1_EG-2_S189.bed.gz", "GSM6125894_WT_VG-3_S206.bed.gz", "GSM6125882_s118a-1_VG-3_S193.bed.gz", "GSM6125863_GE-G_merge.bed.gz", "GSM6125887_s118a-2_VG-2_S198.bed.gz", "GSM6125860_GE-ER_merge.bed.gz", "GSM6125881_s118a-1_VG-2_S192.bed.gz", "GSM6125838_CE-ER_merge.bed.gz", "GSM4520693_REP1_0NAC_0Gy.clean.umi_dedup.aggregated.bed.gz", "GSM5501247_SINAH1.cellranger.peak.bed.gz", "GSM6125871_GV-G_merge.bed.gz", "GSM4520700_REP2_10NAC_10Gy.clean.umi_dedup.aggregated.bed.gz", "GSM4520697_REP2_0NAC_0Gy.clean.umi_dedup.aggregated.bed.gz"], "EBV negative Akata": ["GSM6131565_ANBRD7VSANINPUT_peaks.narrowPeak.gz"], "EBV positive Akata": ["GSM6131567_APBRD7VSAPINPUT_peaks.narrowPeak.gz"], "CORL311": ["GSM5657727_CORL311_OCAT-P_F-2_S6_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657728_CORL311_POU2F3-P_F-1_S3_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657726_CORL311_OCAT-P_F-1_S5_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657729_CORL311_POU2F3-Rb2_S7_R1_001.fastq.gz_peaks.narrowPeak.gz"], "NCIH1048": ["GSM5657731_NCIH1048_CST_S3_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz", "GSM5657730_NCIH1048_12CA5_S2_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz"], "NCIH211": ["GSM5657743_NCIH211_OCA-T_Ab2_S7_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657747_NCIH211_POU2F3_Rb_2_S2_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657745_NCIH211_POU2F3_Ab1_S9_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657742_NCIH211_OCA-T_Ab1_S8_R1_001.fastq.gz_peaks.narrowPeak.gz", "GSM5657737_NCIH211_Cherry_FL_HA_S3_R1_001.fastq_merged.gz_peaks.narrowPeak.gz", "GSM5657746_NCIH211_POU2F3_ChIP_S1_R1_001.fastq.gz_peaks.narrowPeak.gz"], "NCIH526": ["GSM5657751_NCIH526_OCA-T_Ab1_S6_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz", "GSM5657753_NCIH526_POU2F3_PF_Ab1_S3_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz", "GSM5657752_NCIH526_OCA-T_Ab2_S5_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz", "GSM5657754_NCIH526_POU2F3_Rb_2_S2_R1_001.fastq.gz_bt2_snstv.sorted_trimmed_rd.bam_peaks.narrowPeak.gz"], "Huh7 cells": ["GSM5765172_Sora-ATAC-1_peaks.sort.narrowPeak.gz", "GSM5765173_Sora-ATAC-2_peaks.sort.narrowPeak.gz", "GSM5765170_DMSO-ATAC-1_peaks.sort.narrowPeak.gz", "GSM5765171_DMSO-ATAC-2_peaks.sort.narrowPeak.gz"], "WTC CRISPRi GCaMP hiPSC (RRID CVCL_VM38)": ["GSM6043950_C1_1_S9.narrowPeak.txt.gz", "GSM6043948_B2_2_S5.narrowPeak.txt.gz", "GSM6043949_B3_2_S4.narrowPeak.txt.gz", "GSM6043951_C2_2_S8.narrowPeak.txt.gz", "GSM6043952_C3_2_S7.narrowPeak.txt.gz", "GSM6043954_M2_2_S2.narrowPeak.txt.gz", "GSM6043953_M1_1_S3.narrowPeak.txt.gz", "GSM6043955_M3_2_S1.narrowPeak.txt.gz", "GSM6043947_B1_2_S6.narrowPeak.txt.gz"], "hTSC CT27": ["GSM6043300_hTSC_ChIP_H3K27ac_peaks.bed.gz", "GSM6043302_hTSC_ChIP_H3K4me3_peaks.bed.gz", "GSM6043301_hTSC_ChIP_H3K4me1_peaks.bed.gz"], "hTSC CT29": ["GSM6043304_hTSC_CutRun_GATA3_peaks.bed.gz", "GSM6043309_hTSC_CutRun_TFAP2C_peaks.bed.gz", "GSM6043306_hTSC_CutRun_H3K9me3_peaks.bed.gz", "GSM6043305_hTSC_CutRun_H3K27me3_peaks.bed.gz", "GSM6043308_hTSC_CutRun_TEAD4_peaks.bed.gz"], "HEK293T": ["GSM3151927_HEK293T.Cascade_HBE_crRNA.antiFlag.rep1.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3715312_RM_CTCF_KD_peaks.bed.gz", "GSM3151934_HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep2.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM6008192_Dot1L_rep1.frag_bin.bed.gz", "GSM3151929_HEK293T.Cascade_HBE_crRNA.antiFlag.rep3.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM6008197_siDot1L-OGT_rep2.frag_bin.bed.gz", "GSM6008188_IgG_rep1.frag_bin.bed.gz", "GSM3715315_H3K4me3_KD_peaks.bed.gz", "GSM3715314_H3K4me3_CT_peaks.bed.gz", "GSM3715313_RM_CTCF_OE_peaks.bed.gz", "GSM6008195_siNC-OGT_rep2.frag_bin.bed.gz", "GSM3715320_Input_peaks.bed.gz", "GSM3715318_H3K27me3_CT_peaks.bed.gz", "GSM6008190_OGT_rep1.frag_bin.bed.gz", "GSM3715317_H3K9me3_KD_peaks.bed.gz", "GSM3715311_RM_CTCF_CT_peaks.bed.gz", "GSM3151940_HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep2.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3715313_CTCF_OE_peaks.bed.gz", "GSM2584474_PFV_4comp_RQ_293T_July2016_PL6_2bp_hg38.bed.gz", "GSM4503592_MM384_HEK293T_XL_H3K79me2_CST_peaks.narrowPeak.gz", "GSM4503588_MM379_HEK293T_XL_H2AZ_CST_peaks.narrowPeak.gz", "GSM3715312_CTCF_KD_peaks.bed.gz", "GSM3151928_HEK293T.Cascade_HBE_crRNA.antiFlag.rep2.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM4503589_MM380_HEK293T_XL_H2AZ_ABCAM_peaks.narrowPeak.gz", "GSM6008194_siNC-OGT_rep1.frag_bin.bed.gz", "GSM3151941_HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep3.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3151939_HEK293T.Cascade_IL1RN_crRNA_26.antiFlag.rep1.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM4503590_MM381_HEK293T_XL_H3_3_EMDMillipore_peaks.narrowPeak.gz", "GSM3715311_CTCF_CT_peaks.bed.gz", "GSM6008191_OGT_rep2.frag_bin.bed.gz", "GSM6008193_Dot1L_rep2.frag_bin.bed.gz", "GSM6008196_siDot1L-OGT_rep1.frag_bin.bed.gz", "GSM3151935_HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep3.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM3715319_H3K27me3_KD_peaks.bed.gz", "GSM4503591_MM383_HEK293T_XL_H4K16ac_CST_peaks.narrowPeak.gz", "GSM2584473_PFV_4comp_WT_293T_July2016_PL5_2bp_hg38.bed.gz", "GSM3151933_HEK293T.Cascade_IL1RN_crRNA_25.antiFlag.rep1.dedup.masked.sorted_peaks.narrowPeak.gz", "GSM6008189_IgG_rep2.frag_bin.bed.gz", "GSM3715316_H3K9me3_CT_peaks.bed.gz"], "PC9": ["GSM5777954_X8b_3519AZ_PC9_Combo-NF_peaks.narrowPeak.gz", "GSM5777946_X5c_3519AZ_PC9_DMSO-NF_peaks.narrowPeak.gz", "GSM5777945_X5b_3519AZ_PC9_DMSO-NF_peaks.narrowPeak.gz", "GSM5777949_X6c_3519AZ_PC9_9291-NF_peaks.narrowPeak.gz", "GSM5777953_X8a_3519AZ_PC9_Combo-NF_peaks.narrowPeak.gz", "GSM5777950_X7a_3519AZ_PC9_5153-NF_peaks.narrowPeak.gz", "GSM5777952_X7c_3519AZ_PC9_5153-NF_peaks.narrowPeak.gz", "GSM5777947_X6a_3519AZ_PC9_9291-NF_peaks.narrowPeak.gz", "GSM5777944_X5a_3519AZ_PC9_DMSO-NF_peaks.narrowPeak.gz", 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"GSM5777965_X4a_3562AZ_HCC2935_CTRL-NF_peaks.narrowPeak.gz", "GSM5777970_X5c_3562AZ_HCC2935_DTP-NF_peaks.narrowPeak.gz", "GSM5777972_X6b_3562AZ_HCC2935_DTP-5153-NF_peaks.narrowPeak.gz", "GSM5777966_X4b_3562AZ_HCC2935_CTRL-NF_peaks.narrowPeak.gz", "GSM5777969_X5b_3562AZ_HCC2935_DTP-NF_peaks.narrowPeak.gz"], "H1975": ["GSM5777994_X17_07BV_00YDAZ_H1975-Osim-AZD-2_H3K27Ac_hs_i56_peaks.narrowPeak.gz", "GSM5777985_X4c_3519AZ_H1975_Combo-NF_peaks.narrowPeak.gz", "GSM5777974_X1a_3519AZ_H1975_DMSO-NF_peaks.narrowPeak.gz", "GSM5777989_X12_07BR_00YDAZ_H1975-DMSO-3_H3K27Ac_hs_i52_peaks.narrowPeak.gz", "GSM5777982_X3c_3519AZ_H1975_5153-NF_peaks.narrowPeak.gz", "GSM5777988_X11_07BQ_00YDAZ_H1975-DMSO-2_H3K27Ac_hs_i50_peaks.narrowPeak.gz", "GSM5777992_X15_07C0_00YDAZ_H1875-Osim-3_H3K27Ac_hs_i60_peaks.narrowPeak.gz", "GSM5777979_X2c_3519AZ_H1975_9291-NF_peaks.narrowPeak.gz", "GSM5777975_X1b_3519AZ_H1975_DMSO-NF_peaks.narrowPeak.gz", "GSM5777980_X3a_3519AZ_H1975_5153-NF_peaks.narrowPeak.gz", 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"GSM4974194_GBM002-P1C8_G34R_2_peaks.broadPeak.gz", "GSM4974199_GBM002-P1C8_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974200_GBM002-P1C8_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974205_GBM002-P2D3-PBr-G34R_H3K36me3_1_peaks.broadPeak.gz", "GSM4974203_GBM002-P2D3-PBr-G34R_H3K27me3_1_peaks.broadPeak.gz", "GSM4974198_GBM002-P1C8_H3K36me3_2_peaks.broadPeak.gz", "GSM4974196_GBM002-P1C8_H3K27me3_2_peaks.broadPeak.gz", "GSM4974216_GBM002-P2D3-PBr-WT_H3K36me3_2_peaks.broadPeak.gz", "GSM4974221_GBM002-P2D3-PBr-WT_v5-tag_1_peaks.broadPeak.gz", "GSM4974224_GBM002-Parental_G34R_2_peaks.broadPeak.gz", "GSM4974229_GBM002-Parental_H3K4me3_1_peaks.narrowPeak.gz", "GSM4974208_GBM002-P2D3-PBr-G34R_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974204_GBM002-P2D3-PBr-G34R_H3K27me3_2_peaks.broadPeak.gz", "GSM4974195_GBM002-P1C8_H3K27me3_1_peaks.broadPeak.gz", "GSM4974218_GBM002-P2D3-PBr-WT_H3K4me3_2_peaks.narrowPeak.gz", "GSM4974193_GBM002-P1C8_G34R_1_peaks.broadPeak.gz", "GSM4974225_GBM002-Parental_H3K27me3_1_peaks.broadPeak.gz", "GSM4974228_GBM002-Parental_H3K36me3_2_peaks.broadPeak.gz", "GSM4974227_GBM002-Parental_H3K36me3_1_peaks.broadPeak.gz"], "LAPC4": ["GSM4891301_KLF4_DHT_rep1_peaks.narrowPeak.bed.gz", "GSM4891304_AR_V_rep2_peaks.narrowPeak.bed.gz", "GSM4891302_KLF4_DHT_rep2_peaks.narrowPeak.bed.gz", "GSM4891299_KLF4_V_rep1_peaks.narrowPeak.bed.gz", "GSM4891303_AR_V_rep1_peaks.narrowPeak.bed.gz", "GSM4891305_AR_DHT_rep1_peaks.narrowPeak.bed.gz", "GSM4891306_AR_DHT_rep2_peaks.narrowPeak.bed.gz", "GSM4891300_KLF4_V_rep2_peaks.narrowPeak.bed.gz"], "Cal-27": ["GSM4508630_Cal27_KO1.H3K27ac.narrowPeak.gz", "GSM4508624_Cal27.H3K27ac.narrowPeak.gz", "GSM4508636_Cal27_KO17.H3K27ac.narrowPeak.gz"], "Detroit-562": ["GSM4508660_Det562_KO4.H3K27ac.narrowPeak.gz", "GSM4508648_Det562_KO1.H3K27ac.narrowPeak.gz", "GSM4508642_Det562.H3K27ac.narrowPeak.gz", "GSM4508654_Det562_KO2.H3K27ac.narrowPeak.gz"], "PPMI-3411 iPSC": ["GSM4977137_PPMI_iMGL_3411.narrowPeak.gz"], "PPMI-3446 iPSC": ["GSM4977138_PPMI_iMGL_3446.narrowPeak.gz"], "PPMI-3453 iPSC": ["GSM4977139_PPMI_iMGL_3453.narrowPeak.gz"], "PPMI-4101 iPSC": ["GSM4977140_PPMI_iMGL_4101.narrowPeak.gz"], "CS83iCTR-33n1 (33i) iPSC": ["GSM4977141_33i_FBn_50katac1.narrowPeak.gz", "GSM4977142_33i_FBn_50katac2.narrowPeak.gz", "GSM4977143_33i_FBn_50katac3.narrowPeak.gz"], "Ovarian cancer cell line SKOV3": ["GSM5019869_D_peaks_VORINOSTAT2.bed.gz", "GSM5019867_B_peaks_UNTREATED.bed.gz", "GSM5019869_D_peaks_VORINOSTAT1.bed.gz", "GSM5019871_F_peaks_ROMIDEPSIN1.bed.gz", "GSM5019871_F_peaks_ROMIDEPSIN2.bed.gz"], "HEK293": ["GSM4332097_AGO2_without_siRNA_clusters.bed.gz", "GSM4332101_D597A_with_siLMNA_clusters.bed.gz", "GSM4318404_AGO2_with_siTP53_clusters.bed.gz", "GSM4332099_D669A_without_siRNA_clusters.bed.gz", "GSM4332100_AGO2_with_siLMNA_clusters.bed.gz", "GSM4318405_D597A_with_siTP53_clusters.bed.gz", "GSM4332098_D597A_without_siRNA_clusters.bed.gz"], "MDA-MB-231-Erbeta": ["GSM4710522_E3-MDA_1-pol-21.FCHWYW5BBXX_L2_R1_ITCGAGCGT.PE_macs2_peaks.bed.gz", "GSM4710500_KA37.FCHNKLLBBXX_L6_R1_ITCTCGCGC-CCTATCCT.PE_macs2_peaks.bed.gz", "GSM4710524_E3-MDA_3-pol-23.FCHWYW5BBXX_L2_R1_IGTGCTACC.PE_macs2_peaks.bed.gz", "GSM4710518_E2-MDA_2-NF-10.FCHWYW5BBXX_L1_R1_ITAGCTTGT.PE_macs2_peaks.bed.gz", "GSM4710523_E3-MDA_2-pol-22.FCHWYW5BBXX_L2_R1_ITGATACGT.PE_macs2_peaks.bed.gz", "GSM4710498_KA34.FCHNKLLBBXX_L6_R1_ICGGCTATG-TATAGCCT.PE_macs2_peaks.bed.gz", "GSM4710520_E2-MDA_4-NF-12.FCHWYW5BBXX_L1_R1_ICTTGTACT.PE_macs2_peaks.bed.gz", "GSM4710502_KA35.FCHNKLLBBXX_L6_R1_ITCCGCGAA-ATAGAGGC.PE_macs2_peaks.bed.gz", "GSM4710521_E3-MDA_4-NF-20.FCHWYW5BBXX_L2_R1_ITTGGAGGT.PE_macs2_peaks.bed.gz", "GSM4710503_KA62.FCHNKLLBBXX_L8_R1_ICTGAAGCT-CAGGACGT.PE_macs2_peaks.bed.gz", "GSM4710505_KA64.FCHNKLLBBXX_L8_R1_ITAATGCGC-GTACTGAC.PE_macs2_peaks.bed.gz", "GSM4710504_KA40.FCHNKLLBBXX_L7_R1_IATTACTCG-AGGCGAAG.PE_macs2_peaks.bed.gz", "GSM4710517_E3-MDA_3-NF-19.FCHWYW5BBXX_L2_R1_ITCTGCTGT.PE_macs2_peaks.bed.gz", "GSM4710525_E3-MDA_4-pol-24.FCHWYW5BBXX_L2_R1_IGGTTGGAC.PE_macs2_peaks.bed.gz", "GSM4710514_E2-MDA_1-NF-9.FCHWYW5BBXX_L1_R1_IGATCAGCG.PE_macs2_peaks.bed.gz", "GSM4710516_E2-MDA_3-NF-11.FCHWYW5BBXX_L1_R1_IGGCTACAG.PE_macs2_peaks.bed.gz", "GSM4710501_KA38.FCHNKLLBBXX_L7_R1_IAGCGATAG-GGCTCTGA.PE_macs2_peaks.bed.gz", "GSM4710519_E3-MDA_2-NF-18.FCHWYW5BBXX_L2_R1_ITTCTGTGT.PE_macs2_peaks.bed.gz", "GSM4710499_KA61.FCHNKLLBBXX_L8_R1_IGAATTCGT-TAATCTTA.PE_macs2_peaks.bed.gz", "GSM4710515_E3-MDA_1-NF-17.FCHWYW5BBXX_L2_R1_ITGTACCTT.PE_macs2_peaks.bed.gz"], "CNE2 (S18)": ["GSM4796501_S18-EBNA2Con-H3K27ac-Rep1.bed.gz", "GSM4796502_S18-EBNA2Con-H3K27ac-Rep2.bed.gz", "GSM4796503_S18-EBNA2Dox10ug-H3K27ac-Rep1.bed.gz", "GSM4796504_S18-EBNA2Dox10ug-H3K27ac-Rep2.bed.gz", "GSM4796500_S18-Dox10ug-H3K27ac-Rep2.bed.gz", "GSM4796499_S18-Dox10ug-H3K27ac-Rep1.bed.gz"], "BJAB": ["GSM5426082_EBNA2-H3K27ac-Rep1.bed.gz", "GSM5426083_EBNA2-H3K27ac-Rep2.bed.gz", "GSM5426087_EBNA2-ATAC-Rep1_peaks.broadPeak.gz", "GSM5426085_SCNG-H3K27ac-Rep1.bed.gz", "GSM5426090_SCNG-ATAC-Rep2_peaks.broadPeak.gz", "GSM5426089_SCNG-ATAC-Rep1_peaks.broadPeak.gz", "GSM5426086_SCNG-H3K27ac-Rep2.bed.gz", "GSM5426088_EBNA2-ATAC-Rep2_peaks.broadPeak.gz"], "Hela cells": ["GSM4411213_DS70816_peaks_fdr05.bed.gz", "GSM4411214_DS70817_peaks_fdr05.bed.gz"], "Toledo lymphoma cell line": ["GSM4623073_C3_H3K4me3.peaks.bed.gz", "GSM4623074_D1_H3K27ac.peaks.bed.gz", "GSM4623070_C1_H3K4me3.peaks.bed.gz", "GSM4623072_C3_H3K4me1.peaks.bed.gz", "GSM4623076_D1_H3K4me3.peaks.bed.gz", "GSM4623071_C3_H3K27ac.peaks.bed.gz", "GSM4623079_D2_H3K4me3.peaks.bed.gz", "GSM4623077_D2_H3K27ac.peaks.bed.gz", "GSM4623075_D1_H3K4me1.peaks.bed.gz", "GSM4623069_C1_H3K4me1.peaks.bed.gz", "GSM4623078_D2_H3K4me1.peaks.bed.gz", "GSM4623068_C1_H3K27ac.peaks.bed.gz"], "KARPAS-45": ["GSM4591425_KRPS_H3K27ac.bed.gz", "GSM4591424_KRPS_MF_RUNX2_peaks.narrowPeak.gz"], "PER-117": ["GSM4591427_PER2_RUNX2.narrowPeak.gz", "GSM4591428_PER_H3K27ac.bed.gz"], "HaCaT Keratinocyte cell line": ["GSM4568361_OnTAD_hacat_stim_all_chr_sorted.bed.gz", "GSM4568374_HaCaT_st_27ac_helen_combinedpeaks.bed.gz", "GSM4568375_HaCaT_unst_27ac_helen_combined_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568374_HaCat_27ac_st_rep1_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568374_HaCaT_st_27ac_helen_combined_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568374_HaCat_27ac_st_rep2_helenpeaks.bed.gz", "GSM4568375_HaCaT_unst_27ac_helen_combinedpeaks.bed.gz", "GSM4568362_OnTAD_hacat_unstim_all_chr_sorted.bed.gz", "GSM4568375_HaCat_27ac_unst_rep1_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568375_HaCat_27ac_unst_rep2_helenpeaks.bed.gz", "GSM4568375_HaCat_27ac_unst_rep1_helenpeaks.bed.gz", "GSM4568375_HaCat_27ac_unst_rep2_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568374_HaCat_27ac_st_rep2_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568374_HaCat_27ac_st_rep1_helenpeaks.bed.gz"], "My-La CD8+ T lymphocyte cell line": ["GSM4568376_MyLa_27ac_rep1_helenpeaks.bed.gz", "GSM4568376_MyLa_27ac_rep2_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568376_MyLa_27ac_rep2_helenpeaks.bed.gz", "GSM4568376_MyLa_27ac_helen_combined_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568363_OnTAD_myla_all_chr_sorted.bed.gz", "GSM4568376_MyLa_27ac_rep1_helen_stringent_merged_Q0.01_WashU.bed.gz", "GSM4568376_MyLa_27ac_helen_combinedpeaks.bed.gz"], "MOLM-13": ["GSM4407651_M_shk1_peaks.narrowPeak.gz", "GSM4407650_M_con_peaks.narrowPeak.gz"], "A549": ["GSM3855734_AG15688_LN51259.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855735_AG15689_LN51258.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855737_AG15691_LN51256.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3462428_180423_ChIP_B1_HN_D34.peak.bed.gz", "GSM3855747_AG15725_LN51271.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855736_AG15690_LN51257.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855723_AG15677_LN51270.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855731_AG15685_LN51262.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855725_AG15679_LN51268.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855724_AG15678_LN51269.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855738_AG15692_LN51255.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855760_AG14260_LN47593.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855766_AG14318_LN47583.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855746_AG15724_LN51272.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855742_AG15720_LN51276.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855740_AG15694_LN51253.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855726_AG15680_LN51267.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855763_AG14263_LN47585.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855764_AG14316_LN47597.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855744_AG15722_LN51274.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855765_AG14317_LN47587.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855761_AG14261_LN47591.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855741_AG15695_LN51252.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855762_AG14262_LN47589.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855728_AG15682_LN51265.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855732_AG15686_LN51261.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855767_AG14345_LN47581.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855758_AG14257_LN47599.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855730_AG15684_LN51263.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855727_AG15681_LN51266.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855733_AG15687_LN51260.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855739_AG15693_LN51254.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855745_AG15723_LN51273.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3462427_180409_ChIP_A1_HN_D34.peak.bed.gz", "GSM3855743_AG15721_LN51275.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855759_AG14259_LN47595.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855729_AG15683_LN51264.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "HEK293 Flp-In-TReX cells": ["GSM4048170_PureCLIP.crosslinking_sites.MKRN23.bed.gz", "GSM4048168_PureCLIP.crosslinking_sites.MKRN21.bed.gz", "GSM4048169_PureCLIP.crosslinking_sites.MKRN22.bed.gz"], "KBM7": ["GSM4142032_KBM7_H3K4me3.narrowPeak.gz", "GSM4142031_KBM7_H3K27ac.narrowPeak.gz"], "BLaER": ["GSM4221663_CTCF168-2_peaks.narrowPeak.gz", "GSM4221661_CTCF96-2_peaks.narrowPeak.gz", "GSM4221659_CTCF24-2_peaks.narrowPeak.gz", "GSM4221662_CTCF168-1_peaks.narrowPeak.gz", "GSM4221660_CTCF96-1_peaks.narrowPeak.gz", "GSM4221657_CTCF0-2_peaks.narrowPeak.gz", "GSM4221658_CTCF24-1_peaks.narrowPeak.gz", "GSM4221656_CTCF0-1_peaks.narrowPeak.gz"], "HBE": ["GSM4498746_HBE_M_phase_plus_Aphidicolin.bed.gz"], "H1": ["GSM3999734_H1hESC_GATA3_6h_ChIP_rep1_peaks.bed.gz", "GSM4026518_ESC_100ng_ratio.bed.gz", "GSM3999736_H1hESC_GATA3_6h_ChIP_rep2_peaks.bed.gz"], "HepG2.2.15": ["GSM4396392_TENT4B_S4.depth.bed.gz", "GSM4396390_NMG_S2.depth.bed.gz", "GSM4396389_Input1ug_S1.depth.bed.gz", "GSM4396391_TENT4A_S3.depth.bed.gz", "GSM4396394_TENT4B_2nd.depth.bed.gz", "GSM4396393_NMG_2nd.depth.bed.gz"], "H69 cholangiocyte cell line": ["GSM4310212_CPTH6_TGF_beta_3_peaks.bed.gz", "GSM4310203_CPTH6_Vehicle_1_peaks.bed.gz", "GSM4310209_DMSO_Vehicle_3_peaks.bed.gz", "GSM4310210_DMSO_TGF_beta_3_peaks.bed.gz", "GSM4310192_Vehicle_2_K9ac_peaks.bed.gz", "GSM4310201_DMSO_Vehicle_1_peaks.bed.gz", "GSM4310204_CPTH6_TGF_beta_1_peaks.bed.gz", "GSM4310206_DMSO_TGF_beta_2_peaks.bed.gz", "GSM4310191_Vehicle_2_K27ac_peaks.bed.gz", "GSM4310208_CPTH6_TGF_beta_2_peaks.bed.gz", "GSM4310202_DMSO_TGF_beta_1_peaks.bed.gz", "GSM4310195_H69_5Vehicle_3_SMAD3_peaks.bed.gz", "GSM4310197_H69_4TGF_beta_3_SMAD3_peaks.bed.gz", "GSM4310198_H69_5TGF_beta_3_SMAD3_peaks.bed.gz", "GSM4310186_TGF_beta_2_K27ac_peaks.bed.gz", "GSM4310207_CPTH6_Vehicle_2_peaks.bed.gz", "GSM4310187_TGF_beta_2_K9ac_peaks.bed.gz", "GSM4310184_TGF_beta_1_K27ac_peaks.bed.gz", "GSM4310189_Vehicle_1_K27ac_peaks.bed.gz", "GSM4310185_TGF_beta_1_K9ac_peaks.bed.gz", "GSM4310190_Vehicle_1_K9ac_peaks.bed.gz", "GSM4310211_CPTH6_Vehicle_3_peaks.bed.gz", "GSM4310205_DMSO_Vehicle_2_peaks.bed.gz", "GSM4310194_H69_4Vehicle_3_SMAD3_peaks.bed.gz"], "MKL-1": ["GSM4172937_LSD1i-2.bed.gz", "GSM4172936_LSD1i-1.bed.gz", "GSM4172940_Combo-1.bed.gz", "GSM4172934_Control-1.bed.gz", "GSM4172938_dBRD9-1.bed.gz", "GSM4172935_Control-2.bed.gz", "GSM4172941_Combo-2.bed.gz", "GSM4172939_dBRD9-2.bed.gz"], "U87": ["GSM3669993_U87_ATAC.highPValue.distal_intersect.H3K27Ac.bed.gz"], "T98G": ["GSM3395067_T98G_TFIIIC_Serum_peaks.bed.gz", "GSM3395069_T98G_TFIIIC_noSerum_peaks.bed.gz", "GSM3669994_T98G_ATAC.highPValue.distal_intersect.H3K27Ac.bed.gz", "GSM3395082_T98G_TFIIIC_serum_recovery_peaks.bed.gz"], "LN229": ["GSM3669996_LN229_ATAC.highPValue.distal_intersect.H3K27Ac.bed.gz"], "LNZ308": ["GSM3669998_LNZ308_ATAC.highPValue.distal_intersect.H3K27Ac.bed.gz"], "GSC23": ["GSM3669999_GSC23_ATAC.highPValue.distal_intersect.H3K27Ac.bed.gz"], "TS576": ["GSM3670001_TS576_ATAC.highPValue.distal_intersect.H3K27Ac.bed.gz"], "SF767": ["GSM3670003_SF767_ATAC.highPValue.distal_intersect.H3K27Ac.bed.gz"], "HN12": ["GSM3670004_HN12_ATAC.highPValue.distal_intersect.H3K27Ac.bed.gz"], "Cal27": ["GSM3670006_Cal27_ATAC.highPValue.distal_intersect.H3K27Ac.bed.gz"], "Detroit562": ["GSM3670007_Detroit562_ATAC.highPValue.distal_intersect.H3K27Ac.bed.gz"], "T47D": ["GSM3395076_T47D_H3K18ac_noSerum_peaks.bed.gz", "GSM3045129_FPR_1_peaks.narrowPeak.gz", "GSM3415544_yc_033_peaks.narrowPeak.gz", "GSM3415553_yc_042_peaks.narrowPeak.gz", "GSM3045132_FPR_4_peaks.narrowPeak.gz", "GSM3415550_yc_039_peaks.narrowPeak.gz", "GSM3045130_FPR_2_peaks.narrowPeak.gz", "GSM3045112_RAF9_20637_CAGATC_peaks.narrowPeak.gz", "GSM3045134_FPR_6_peaks.narrowPeak.gz", "GSM3045108_RAF2_20630_ACTGAT_peaks.narrowPeak.gz", "GSM3395053_T47D_POL3_Serum_peaks.bed.gz", "GSM3045109_RAF3_20631_ATGTCA_peaks.narrowPeak.gz", "GSM3415552_yc_041_peaks.narrowPeak.gz", "GSM3395056_T47D_BDP1_noSerum_peaks.bed.gz", "GSM3045123_RAF3_11948_TAGCTT_peaks.broadPeak.gz", 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"GSM3045111_RAF8_20636_TGACCA_peaks.narrowPeak.gz", "GSM3395074_T47D_CTCF_Serum_peaks.bed.gz", "GSM3045113_RAF10_20638_CCGTCC_peaks.narrowPeak.gz", "GSM3395051_T47D_TFIIIC_Serum_peaks.bed.gz", "GSM3415554_yc_043_peaks.narrowPeak.gz"], "MC10A": ["GSM3395061_MCF10A_POL3_Serum_peaks.bed.gz", "GSM3395065_MCF10A_POL3_noSerum_peaks.bed.gz", "GSM3395064_MCF10A_BDP1_noSerum_peaks.bed.gz", "GSM3395063_MCF10A_TFIIIC_noSerum_peaks.bed.gz", "GSM3395060_MCF10A_BDP1_Serum_peaks.bed.gz", "GSM3395059_MCF10A_TFIIIC_Serum_peaks.bed.gz"], "IMR90": ["GSM3395073_IMR90_TFIIIC_noSerum_peaks.bed.gz", "GSM3395071_IMR90_TFIIIC_Serum_peaks.bed.gz"], "HL-60": ["GSM4057519_HL-60_DNase.narrowPeak.gz", "GSM4057498_HL-60_H3K27ac.broadPeak.gz"], "Molm13": ["GSM4057500_Molm13_H3K27ac.broadPeak.gz", "GSM4057518_Molm13_DNase.narrowPeak.gz"], "OCI-AML3": ["GSM4057502_OCI-AML3_H3K27ac.broadPeak.gz", "GSM4057517_OCI-AML3_DNase.narrowPeak.gz"], "HEK TE": ["GSM4026856_VP7_interactions.bed.gz", "GSM4026859_VP10_interactions.bed.gz", "GSM4026855_VP6_interactions.bed.gz", "GSM4026858_VP9_interactions.bed.gz", "GSM4026857_VP8_interactions.bed.gz"], "GM09027A": ["GSM3093783_Lyu_ChIP_Seq_APH2e-3_peaks.broadPeak.gz", "GSM3093784_Lyu_ChIP_Seq_HU1e-3_peaks.broadPeak.gz", "GSM3093781_Lyu_ChIP_Seq_UN2e-3_peaks.broadPeak.gz", "GSM3093780_Lyu_ChIP_Seq_UN1e-3_peaks.broadPeak.gz", "GSM3093782_Lyu_ChIP_Seq_APH1e-3_peaks.broadPeak.gz", "GSM3093786_Lyu_ChIP_Seq_MMS1e-3_peaks.broadPeak.gz", "GSM3093787_Lyu_ChIP_Seq_MMS2e-3_peaks.broadPeak.gz", "GSM3093785_Lyu_ChIP_Seq_HU2e-3_peaks.broadPeak.gz"], "Epithelial carcinoma": ["GSM3029785_MACS_CENP-A-TAP_G2-2.bed.gz", "GSM3029794_SICER_CENP-A-TAP_midS-1.bed.gz", "GSM3029785_MACS_CENP-A-TAP_G2-1.bed.gz", "GSM3029788_SICER_CENP-A-LAP_G1-2.bed.gz", "GSM3029789_SICER_Single_copy_variants_CENP-A-LAP_G2-2.bed.gz", "GSM3029784_MACS_CENP-A-TAP_G1-2.bed.gz", "GSM3029785_SICER_CENP-A-TAP_G2.YA6_newInput.bed.gz", "GSM3029784_SICER_single_copy_variant_CENP-A-TAP_G1-1.bed.gz", "GSM3029802_SICER_Repli-seq_BrdU_lateS_S7-2.bed.gz", "GSM3029785_SICER_CENP-A-TAP_G2.YA3_newInput.bed.gz", "GSM3029788_MACS_CENP-A-LAP_G1-2.bed.gz", "GSM3029800_SICER_Repli-seq_BrdU_S1-2.bed.gz", "GSM3029788_SICER_CENP-A-LAP_G1-1.bed.gz", "GSM3029785_SICER_single_copy_variant_CENP-A-TAP_G2-1.bed.gz", "GSM3029786_SICER_H3.1-TAP-2.bed.gz", "GSM3029801_SICER_Repli-seq_BrdU_midS_S4-2.bed.gz", "GSM3029784_SICER_CENP-A-TAP_G1.YA5_newInput.bed.gz", "GSM3029784_SICER_CENP-A-TAP_G1.YA2_newInput.bed.gz", "GSM3029789_MACS_CENP-A-LAP_G2-1.bed.gz", "GSM3029783_SICER_single_copy_variant_CENP-A-TAP_RC-1.bed.gz", "GSM3029794_SICER_CENP-A-TAP_midS-2.bed.gz", "GSM3029783_MACS_CENP-A-TAP_RC-1.bed.gz", "GSM3029786_SICER_single_copy_variant_H3.1-TAP_RC-1.bed.gz", "GSM3029788_SICER_Single_copy_variants_CENP-A-LAP_G1-2.bed.gz", "GSM3029794_SICER_single_copy_variant_CENP-A-TAP_midS-1.bed.gz", "GSM3029788_SICER_Single_copy_variants_CENP-A-LAP_G1-1.bed.gz", "GSM3029788_MACS_CENP-A-LAP_G1-1.bed.gz", "GSM3029789_SICER_CENP-A-LAP_G2.Yael5_newInput.bed.gz", "GSM3029783_SICER_CENP-A-TAP_RC-1.bed.gz", "GSM3029784_MACS_CENP-A-TAP_G1-1.bed.gz", "GSM3029783_MACS_CENP-A-TAP_RC-2.bed.gz", "GSM3029784_SICER_single_copy_variant_CENP-A-TAP_G1-2.bed.gz", "GSM3029789_SICER_CENP-A-LAP_G2.Yael4_newInput.bed.gz", "GSM3029783_SICER_CENP-A-TAP_RC-2.bed.gz", "GSM3029786_MACS_H3.1-TAP-2.bed.gz", "GSM3029786_SICER_H3.1-TAP-1.bed.gz", "GSM3029789_MACS_CENP-A-LAP_G2-2.bed.gz", "GSM3029785_SICER_single_copy_variant_CENP-A-TAP_G2-2.bed.gz", "GSM3029786_SICER_single_copy_variant_H3.1-TAP_RC-2.bed.gz", "GSM3029789_SICER_Single_copy_variants_CENP-A-LAP_G2-1.bed.gz", "GSM3029801_SICER_Repli-seq_BrdU_midS_S4-1.bed.gz", "GSM3029794_SICER_single_copy_variant_CENP-A-TAP_midS-2.bed.gz", "GSM3029786_MACS_H3.1-TAP-1.bed.gz", "GSM3029802_SICER_Repli-seq_BrdU_lateS_S7-1.bed.gz", 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"GSM2059323_HTGTS_MEC1.Idelalisib.C1_1.bed.gz", "GSM2059322_HTGTS_MEC1.DMSO.C2_2.bed.gz", "GSM2059327_HTGTS_MEC1.Duvelisib.C1_1.bed.gz", "GSM2059328_HTGTS_MEC1.Duvelisib.C1_2.bed.gz", "GSM2059332_HTGTS_MEC1.Ibrutinib.C1_2.bed.gz", "GSM2059330_HTGTS_MEC1.Duvelisib.C2_4.bed.gz", "GSM2059326_HTGTS_MEC1.Idelalisib.C2_4.bed.gz", "GSM2059329_HTGTS_MEC1.Duvelisib.C2_3.bed.gz", "GSM2059334_HTGTS_MEC1.Ibrutinib.C2_4.bed.gz", "GSM2430305_HTGTS_MEC1.Duvelisib.C1_5.bed.gz", "GSM2059321_HTGTS_MEC1.DMSO.C1_1.bed.gz", "GSM2059324_HTGTS_MEC1.Idelalisib.C1_2.bed.gz"], "JeKo-1": ["GSM2059343_HTGTS_JeKo-1.Idelalisib.C2_5.bed.gz", "GSM2059341_HTGTS_JeKo-1.Idelalisib.C2_3.bed.gz", "GSM2059337_HTGTS_JeKo-1.DMSO.C2_3.bed.gz", "GSM2059349_HTGTS_JeKo-1.Duvelisib.C2_5.bed.gz", "GSM2059352_HTGTS_JeKo-1.Ibrutinib.C2_3.bed.gz", "GSM2059335_HTGTS_JeKo-1.DMSO.C1_1.bed.gz", "GSM2059342_HTGTS_JeKo-1.Idelalisib.C2_4.bed.gz", "GSM2059339_HTGTS_JeKo-1.Idelalisib.C1_1.bed.gz", "GSM2059344_HTGTS_JeKo-1.Idelalisib.C2_6.bed.gz", "GSM2059347_HTGTS_JeKo-1.Duvelisib.C2_3.bed.gz", "GSM2059346_HTGTS_JeKo-1.Duvelisib.C1_2.bed.gz", "GSM2059348_HTGTS_JeKo-1.Duvelisib.C2_4.bed.gz", "GSM2059350_HTGTS_JeKo-1.Ibrutinib.C1_1.bed.gz", "GSM2059340_HTGTS_JeKo-1.Idelalisib.C1_2.bed.gz", "GSM2059338_HTGTS_JeKo-1.DMSO.C2_4.bed.gz", "GSM2059345_HTGTS_JeKo-1.Duvelisib.C1_1.bed.gz", "GSM2059336_HTGTS_JeKo-1.DMSO.C1-2_1.bed.gz", "GSM2059351_HTGTS_JeKo-1.Ibrutinib.C1_2.bed.gz"], "MEC1 AID KO": ["GSM2430309_HTGTS_MEC1.KO-DMSO.C2_3.bed.gz", "GSM2430312_HTGTS_MEC1.KO-Idelalisib.C2_3.bed.gz", "GSM2430315_HTGTS_MEC1.KO-Duvelisib.C2_3.bed.gz", "GSM2430310_HTGTS_MEC1.KO-Idelalisib.C1_1.bed.gz", "GSM2430313_HTGTS_MEC1.KO-Duvelisib.C1_1.bed.gz", "GSM2430307_HTGTS_MEC1.KO-DMSO.C1_1.bed.gz", "GSM2430314_HTGTS_MEC1.KO-Duvelisib.C1_2.bed.gz", "GSM2430308_HTGTS_MEC1.KO-DMSO.C1_2.bed.gz", "GSM2430311_HTGTS_MEC1.KO-Idelalisib.C1_2.bed.gz"], "SH-SY5Y": ["GSM1898102_SATB1_Control_minus_Control_input.bed.gz", "GSM1898101_ChAT_AB_minus_AB_input.bed.gz", "GSM1898100_ChAT_Control_minus_Control_input.bed.gz", "GSM1898103_SATB1_AB_minus_AB_input.bed.gz"]}, "tissue_cell_type": {"CD34+ cells derived from fetal liver": ["GSM5530950_3437_peaks_clean.bed.gz", "GSM5530949_3429_peaks_clean.bed.gz", "GSM5530946_3442_peaks_clean.bed.gz", "GSM5530945_3434_peaks_clean.bed.gz"], "CD34+ cells derived from adult peripheral blood": ["GSM5530952_3422_peaks_clean.bed.gz", "GSM5530951_3415_peaks_clean.bed.gz", "GSM5530948_3426_peaks_clean.bed.gz", "GSM5530947_3419_peaks_clean.bed.gz"]}, "antibody": {"ER (Epicypher #13-2012)": ["GSM6125868_GV-ER_merge.bed.gz", "GSM6125838_CE-ER_merge.bed.gz", "GSM6125860_GE-ER_merge.bed.gz", "GSM6125846_CV-ER_merge.bed.gz"], "GRHL2 (Millipore Sigma, #HPA004820)": ["GSM6125871_GV-G_merge.bed.gz", "GSM6125863_GE-G_merge.bed.gz", "GSM6125849_CV-G_merge.bed.gz", "GSM6125841_CE-G_merge.bed.gz"], "pS118-ER (Santa Cruz, #sc-12915)": 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"GSM4656262_DDIT3-N_CTCF_narrow_Peaks.bed.gz", "GSM5373118_MCF7_CTCF_Ctrl.bed.gz", "GSM4656266_DDIT3-T-CTCF_narrow_Peaks.bed.gz"], "Mau2": ["GSM5373168_RPE_Mau2_FBS+.bed.gz", "GSM5373120_MCF7_Mau2_Ctrl.bed.gz", "GSM5373121_MCF7_Mau2_E2.bed.gz", "GSM5373167_RPE_Mau2_FBS-.bed.gz", "GSM5373137_MCF7_Mau2_KD_Ctrl.bed.gz", "GSM5373138_MCF7_Mau2_KD_E2.bed.gz"], "RNA Pol2": ["GSM5373186_Fibroblast_Pol2_CdLS.bed.gz", "GSM5880288_New_MCF7_Pol2_NIPBLKD_Ctrl.peak.bed.gz", "GSM5373142_MCF7_Pol2_KD_E2.bed.gz", "GSM5880292_New_MCF7_Pol2_WT_Ctrl.peak.bed.gz", "GSM5880289_New_MCF7_Pol2_NIPBLKD_E2.peak.bed.gz", "GSM5373123_MCF7_Pol2_E2_30min.bed.gz", "GSM5373124_MCF7_Pol2_E2_45min.bed.gz", "GSM5373122_MCF7_Pol2_Ctrl.bed.gz", "GSM5373163_RPE_Pol2_FBS-.bed.gz", "GSM5373164_RPE_Pol2_FBS+.bed.gz", "GSM5880291_New_MCF7_Pol2_Rad21KD_E2.peak.bed.gz", "GSM5880293_New_MCF7_Pol2_WT_E2.peak.bed.gz", "GSM5880290_New_MCF7_Pol2_Rad21KD_Ctrl.peak.bed.gz", "GSM5373188_Fibroblast_Pol2_Normal.bed.gz", 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"GSM5373152_RPE_Rad21_WT.bed.gz", "GSM5373154_HeLa_Rad21_WT_rep2.bed.gz", "GSM5373129_MCF7_Rad21_E2_45min.bed.gz", "GSM5373153_HeLa_Rad21_WT_rep1.bed.gz", "GSM5373159_RPE_Rad21_FBS+DRB.bed.gz", "GSM5373155_RPE_Rad21_FBS-.bed.gz", "GSM5880300_New_RPE_Rad21_FBS+.peak.bed.gz", "GSM5373194_Fibroblast_Rad21_Normal.bed.gz", "GSM5373157_RPE_Rad21_DRB-.bed.gz", "GSM5373150_Bcell_Rad21_WT.bed.gz", "GSM5373156_RPE_Rad21_FBS+.bed.gz", "GSM5880301_New_RPE_Rad21_FBS-.peak.bed.gz", "GSM5373193_Fibroblast_Rad21_CHOPS.bed.gz", "GSM5373158_RPE_Rad21_DRB+.bed.gz", "GSM5373149_293T_Rad21_WT.bed.gz"], "TAF1": ["GSM5373130_MCF7_TAF1_Ctrl.bed.gz", "GSM5373131_MCF7_TAF1_E2.bed.gz"], "p300": ["GSM5373140_MCF7_p300_KD_E2.bed.gz", "GSM5373139_MCF7_p300_KD_Ctrl.bed.gz", "GSM5373133_MCF7_p300_E2.bed.gz", "GSM5373132_MCF7_p300_Ctrl.bed.gz"], "ER": ["GSM5373148_MCF7_ER_E2.bed.gz", "GSM5373147_MCF7_ER_Ctrl.bed.gz"], "SA1": ["GSM5373160_RPE_SA1_FBS-.bed.gz", "GSM5373161_RPE_SA1_FBS+.bed.gz"], "Med1": 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"GSM4310186_TGF_beta_2_K27ac_peaks.bed.gz", "GSM5373182_Fibroblast_H3K27ac_Normal.bed.gz", "GSM4656274_EWS-FLI1-HI-H3K27ac_broad_Peaks.bed.gz", "GSM4710501_KA38.FCHNKLLBBXX_L7_R1_IAGCGATAG-GGCTCTGA.PE_macs2_peaks.bed.gz", "GSM4310184_TGF_beta_1_K27ac_peaks.bed.gz", "GSM4310189_Vehicle_1_K27ac_peaks.bed.gz", "GSM4656290_WT-X-H3K27ac_broad_Peaks.bed.gz", "GSM5403560_H3K27ac_Rep1_peaks.bed.gz", "GSM4656271_EWS-FLI1-G_H3K27ac_broad_Peaks.bed.gz", "GSM4710499_KA61.FCHNKLLBBXX_L8_R1_IGAATTCGT-TAATCTTA.PE_macs2_peaks.bed.gz", "GSM4656288_WT-C_H3K27ac_broad_Peaks.bed.gz", "GSM4656264_DDIT3-Z-H3K27ac_broad_Peaks.bed.gz"], "NIPBL": ["GSM5373185_Fibroblast_NIPBL_Normal.bed.gz", "GSM5373184_Fibroblast_NIPBL_CHOPS.bed.gz", "GSM5373183_Fibroblast_NIPBL_CdLS.bed.gz"], "anti-H3K27ac (Diagenode C15410196)": ["GSM6043300_hTSC_ChIP_H3K27ac_peaks.bed.gz"], "anti-H3K4me1 (Abcam ab8895)": ["GSM6043301_hTSC_ChIP_H3K4me1_peaks.bed.gz"], "anti-H3K4me3 (Diagenode C15410003)": 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"GSM5553105_42D-ENZR-shASCL1-H3K27me3-ChIP-broad_peaks.broadPeak.gz", "GSM4656282_FUS-DDIT3-R-H3K27me3_broad_Peaks.bed.gz"], "EZH2": ["GSM5553106_42D-ENZR-shASCL1-EZH2-ChIP-broad_peaks.broadPeak.gz"], "PU.1": ["GSM5704557_PU-1-HDFs_PU-1_hg38.bed.gz", "GSM5725000_PIB-HDFs-PU-1_hg38_rep2.bed.gz", "GSM5704554_PIB-HDFs_PU-1_hg38.bed.gz"], "IRF8": ["GSM5725001_PIB-HDFs-IRF8_hg38_rep2.bed.gz", "GSM5704555_PIB-HDFs_IRF8_hg38.bed.gz", "GSM5704558_IRF8-HDFs_IRF8_hg38.bed.gz"], "BATF3": ["GSM5725002_PIB-HDFs-BATF3_hg38_rep2.bed.gz", "GSM5704559_BATF3-HDFs_BATF3_hg38.bed.gz", "GSM5704556_PIB-HDFs_BATF3_hg38.bed.gz"], "n house anti-GTF3C2 rabbit polyclonal": ["GSM5839471_TFIIIC_H9_hESCs_peaks.bed.gz"], "NB100-304 (Novus Biologicals)": ["GSM5203053_TP53BP1_0.2kb_bin_cov_CT_exclusive.bed.gz", "GSM5203054_TP53BP1_0.2kb_bin_cov_KD_exclusive.bed.gz"], "H3K79me2(ab3594, Abcam)": ["GSM5487676_OMM2.3-H3K79me2-rep1_peaks.narrowPeak.gz"], "H3K79me2(ab3595, Abcam)": 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"GSM5501192_A603_SLX-20231_K562_100k_bg4_bulk_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501247_SINAH1.cellranger.peak.bed.gz", "GSM5501242_A703_A_SLX-20550_MCF7_10k_bg4_10X_6th_ref_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501189_A595_SLX-20231_U2OS_100k_bg4_bulk_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501218_A656_SLX-20232_K562_10k_bg4_cellNO_rep2_tec2.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "control-noPrimary antibody": ["GSM5501221_A663_SLX-20232_K562_10k_None_cellNO_rep2_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501191_A598_SLX-20231_U2OS_100k_None_bulk_rep1_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501227_A683_SLX-20529_MCF7_50k_none_MCF7_1st_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501194_A606_SLX-20231_K562_100k_None_bulk_rep2_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501197_A611_SLX-20231_U2OS_100k_None_bulk_rep2_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501188_A592_SLX-20231_K562_100k_None_bulk_rep1_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501203_A634_SLX-20232_U2OS_100k_None_bulk_rep3_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501212_A647_SLX-20232_K562_10k_None_cellNO_rep1_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501219_A661_SLX-20232_K562_100k_None_cellNO_rep2_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501233_A693_SLX-20539_MCF7_10k_none_MCF7_2nd_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501200_A630_SLX-20232_K562_100k_None_bulk_rep3_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501228_A684_SLX-20530_MCF7_10k_none_MCF7_1st_rep1_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501232_A692_SLX-20538_MCF7_50k_none_MCF7_2nd_rep2_tec1.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501210_A645_SLX-20232_K562_100k_None_cellNO_rep1_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501220_A662_SLX-20232_K562_50k_None_cellNO_rep2_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz", "GSM5501211_A646_SLX-20232_K562_50k_None_cellNO_rep1_tecx.sortName.1000.clean.fragments.bedgraph.0.05fdr.stringent.min8.reduced.bed.gz"], "H3K4me3": ["GSM5403563_H3K4me3_Rep2_peaks.bed.gz", "GSM5403562_H3K4me3_Rep1_peaks.bed.gz"], "Rabbit polyclonal H3K27ac (Abcam #ab4729)": ["GSM5657497_Untreated_H3K27ac_rep1_peaks.bed.gz", "GSM5657506_TNFalpha_24hr_H3K27ac_rep2_peaks.bed.gz", "GSM5657505_TNFalpha_24hr_H3K27ac_rep1_peaks.bed.gz", "GSM5657501_Cobimetinib_24hr_H3K27ac_rep1_peaks.bed.gz", "GSM5657498_Untreated_H3K27ac_rep2_peaks.bed.gz", "GSM5657502_Cobimetinib_24hr_H3K27ac_rep2_peaks.bed.gz"], "ab8580, Abcam": ["GSM5133441_45_Chip_K4me3.bed.gz", "GSM5133459_7_5_HCV_K4me3.bed.gz", "GSM5133447_45_HCV_K4me3.bed.gz", "GSM5133453_7_5_Chip_K4me3.bed.gz"], "ab8896, Abcam": ["GSM5133454_7_5_Chip_K4me1.bed.gz", "GSM5133442_45_Chip_K4me1.bed.gz", "GSM5133448_45_HCV_K4me1.bed.gz", "GSM5133460_7_5_HCV_K4me1.bed.gz"], "ab4729, Abcam": ["GSM5133461_7_5_HCV_K27Ac.bed.gz", "GSM5133449_45_HCV_K27Ac.bed.gz", "GSM5133443_45_Chip_K27Ac.bed.gz", "GSM5133455_7_5_Chip_K27Ac.bed.gz"], "#9733, CST": ["GSM5133444_Hu1545_H3K27me3.bed.gz", "GSM5133450_Hu1545_HCV_H3K27me3.bed.gz", "GSM5133456_Huh75_H3K27me3.bed.gz", "GSM5133462_Huh75_HCV_H3K27me3.bed.gz"], "na": ["GSM5133451_Hu1545_HCV-ATAC.bed.gz", "GSM5133457_Huh75-ATAC.bed.gz", "GSM5133445_Hu1545-ATAC.bed.gz", "GSM5133463_Huh75_HCV-ATAC.bed.gz"], "Anti-FGFR1 (Abcam - ab10646)": ["GSM4460125_macs2_ctrl_FGFR-rep2_peaks_peaks.narrowPeak.gz", "GSM4515957_macs2_MCF7_NLS_Rep1_peaks_peaks.narrowPeak.bed.gz", "GSM4460142_macs2_siFOXA1_FGFR-rep1_peaks_peaks.narrowPeak.gz", "GSM4460139_macs2_siNC_FGFR-rep1_peaks_peaks.narrowPeak.gz", "GSM4460143_macs2_siFOXA1_FGFR-rep2_peaks_peaks.narrowPeak.gz", "GSM4460140_macs2_siNC_FGFR-rep2_peaks_peaks.narrowPeak.gz", "GSM4460124_macs2_ctrl_FGFR-rep1_peaks_peaks.narrowPeak.gz", "GSM4515959_macs2_MCF7_NLS_Rep3_peaks_peaks.narrowPeak.bed.gz", "GSM4515958_macs2_MCF7_NLS_Rep2_peaks_peaks.narrowPeak.bed.gz"], "Anti-Histone H3K27ac (Abcam ab4729)": ["GSM4460127_macs2_ctrl-H3K27ac-rep1_peaks_peaks.narrowPeak.gz", "GSM4460128_macs2_ctrl-H3K27ac-rep2_peaks_peaks.narrowPeak.gz"], "Anti-Histone H3K4me3 (Abcam ab8580)": ["GSM4460130_macs2_ctrl_H3K4ME3-rep1_peaks_peaks.narrowPeak.gz", "GSM4460131_macs2_ctrl_H3K4ME3-rep2_peaks_peaks.narrowPeak.gz"], "Anti-Rpb1 CTD (4H8) (CST - #2629)": ["GSM4460134_macs2_ctrl_RNAPOLII-rep2_peaks_peaks.narrowPeak.gz", "GSM4460133_macs2_ctrl_RNAPOLII-rep1_peaks_peaks.narrowPeak.gz"], "Anti-HNF-3\u03b1 (Q6) (sc - 101058)": ["GSM4460136_macs2_ctrl-FOXA2-rep1_peaks_peaks.narrowPeak.gz", "GSM4460137_macs2_ctrl-FOXA2-rep2_peaks_peaks.narrowPeak.gz"], "DDIT3": ["GSM4656287_WT-C_DDIT3_narrow_Peaks.bed.gz", "GSM4656263_DDIT3-N_DDIT3_narrow_Peaks.bed.gz", "GSM4656267_DDIT3-T-DDIT3_narrow_Peaks.bed.gz", "GSM4656283_FUS-DDIT3-S-DDIT3_narrow_Peaks.bed.gz", "GSM4656286_WT-B-DDIT3_narrow_Peaks.bed.gz", "GSM4656280_FUS-DDIT3-E_DDIT3_narrow_Peaks.bed.gz"], "JARID2 antibody, cell signaling technology, 13594S, RRID: AB_2798269": ["GSM4495605_1-4_JARID2_S16_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz", "GSM4495606_3-4_JARID2_S22_vsInput_MD_MQ10filtered_MACS2_q1e_2_withmodel_peaks.narrowPeak.gz"], "Anti-EZH2 (Abcam)": ["GSM5008032_EZH2TMZ_24_peaks.narrowPeak.gz", "GSM5008032_EZH2TMZ_24_summits.bed.gz"], "Anti_EZH2 (Abcam)": ["GSM5008033_EZH2_TMZD4_summits.bed.gz", "GSM5008033_EZH2_TMZD4_peaks.narrowPeak.gz"], "Anti-H3K27me3 (Abcam)": ["GSM5008034_H3K27me3TMZ_24_peaks.narrowPeak.gz", "GSM5008034_H3K27me3TMZ_24_summits.bed.gz"], "Anti-H3k27me3 (Abcam)": ["GSM5008035_H3K27me3TMZ_D4_peaks.narrowPeak.gz", "GSM5008035_H3K27me3TMZ_D4_summits.bed.gz"], "Anti-H3k27ac (Abcam)": ["GSM5008036_K27acDMSO_D4_summits.bed.gz", "GSM5008036_K27acDMSO_D4_peaks.narrowPeak.gz"], "Anti-H3K27ac (Abcam)": ["GSM5008037_K27acTMZ_D4_summits.bed.gz", "GSM5008037_K27acTMZ_D4_peaks.narrowPeak.gz"], "NF\u03baB": ["GSM4710520_E2-MDA_4-NF-12.FCHWYW5BBXX_L1_R1_ICTTGTACT.PE_macs2_peaks.bed.gz", "GSM4710519_E3-MDA_2-NF-18.FCHWYW5BBXX_L2_R1_ITTCTGTGT.PE_macs2_peaks.bed.gz", "GSM4710518_E2-MDA_2-NF-10.FCHWYW5BBXX_L1_R1_ITAGCTTGT.PE_macs2_peaks.bed.gz", "GSM4710517_E3-MDA_3-NF-19.FCHWYW5BBXX_L2_R1_ITCTGCTGT.PE_macs2_peaks.bed.gz", "GSM4710514_E2-MDA_1-NF-9.FCHWYW5BBXX_L1_R1_IGATCAGCG.PE_macs2_peaks.bed.gz", "GSM4710521_E3-MDA_4-NF-20.FCHWYW5BBXX_L2_R1_ITTGGAGGT.PE_macs2_peaks.bed.gz", "GSM4710516_E2-MDA_3-NF-11.FCHWYW5BBXX_L1_R1_IGGCTACAG.PE_macs2_peaks.bed.gz", "GSM4710515_E3-MDA_1-NF-17.FCHWYW5BBXX_L2_R1_ITGTACCTT.PE_macs2_peaks.bed.gz"], "RNA Pol II phospho Ser2": ["GSM4710522_E3-MDA_1-pol-21.FCHWYW5BBXX_L2_R1_ITCGAGCGT.PE_macs2_peaks.bed.gz", "GSM4710525_E3-MDA_4-pol-24.FCHWYW5BBXX_L2_R1_IGGTTGGAC.PE_macs2_peaks.bed.gz", "GSM4710524_E3-MDA_3-pol-23.FCHWYW5BBXX_L2_R1_IGTGCTACC.PE_macs2_peaks.bed.gz", "GSM4710523_E3-MDA_2-pol-22.FCHWYW5BBXX_L2_R1_ITGATACGT.PE_macs2_peaks.bed.gz"], "H3K4me1/Diagenode/C15410037": ["GSM4910549_12FMPN_H3K04ME1_PEAKS.bed.bz2", "GSM4910537_06MMDN_H3K04ME1_PEAKS.bed.bz2", "GSM4910545_11MMDN_H3K04ME1_PEAKS.bed.bz2", "GSM4910553_13MMPN_H3K04ME1_PEAKS.bed.bz2", "GSM4910557_18MMPN_H3K04ME1_PEAKS.bed.bz2", "GSM4910541_07FMDY_H3K04ME1_PEAKS.bed.bz2"], "H3K4me3/CellSignalingTechnology/9751S": ["GSM4910538_06MMDN_H3K04ME3_PEAKS.bed.bz2", "GSM4910542_07FMDY_H3K04ME3_PEAKS.bed.bz2", "GSM4910558_18MMPN_H3K04ME3_PEAKS.bed.bz2", "GSM4910546_11MMDN_H3K04ME3_PEAKS.bed.bz2", "GSM4910554_13MMPN_H3K04ME3_PEAKS.bed.bz2", "GSM4910550_12FMPN_H3K04ME3_PEAKS.bed.bz2"], "H3K27me3/Diagenode/pAb-069-050": ["GSM4910551_12FMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910539_06MMDN_H3K27ME3_PEAKS.bed.bz2", "GSM4910555_13MMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910547_11MMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910559_18MMPN_H3K27ME3_PEAKS.bed.bz2", "GSM4910543_07FMDY_H3K27ME3_PEAKS.bed.bz2"], "Millipore Sigma ABE572": ["GSM4411215_DS70818_peaks_fdr05.bed.gz", "GSM4411213_DS70816_peaks_fdr05.bed.gz", "GSM4411216_DS70819_peaks_fdr05.bed.gz", "GSM4411214_DS70817_peaks_fdr05.bed.gz"], "04-080\u00a0Sigma-Aldrich, Anti-BAF250a/ARID1a Antibody, clone PSG3": ["GSM4134962_ChIPseq_3-ARID1A-mm_S3_vs7Input_MACS2_q1e_2.narrowPeak.gz"], "BRG1": ["GSM3855725_AG15679_LN51268.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855726_AG15680_LN51267.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855724_AG15678_LN51269.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855747_AG15725_LN51271.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855723_AG15677_LN51270.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "H3K4me2": ["GSM3855728_AG15682_LN51265.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855730_AG15684_LN51263.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855727_AG15681_LN51266.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855729_AG15683_LN51264.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855731_AG15685_LN51262.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "H3K4me1": ["GSM3855732_AG15686_LN51261.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855733_AG15687_LN51260.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855734_AG15688_LN51259.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855735_AG15689_LN51258.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855736_AG15690_LN51257.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "BRM": ["GSM3855746_AG15724_LN51272.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855742_AG15720_LN51276.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855744_AG15722_LN51274.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855745_AG15723_LN51273.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz", "GSM3855743_AG15721_LN51275.GRCh38_no_alts.uniques.sorted.hotspots.fdr0.05.bed.gz"], "NMG": ["GSM4396390_NMG_S2.depth.bed.gz", "GSM4396393_NMG_2nd.depth.bed.gz"], "TENT4A": ["GSM4396391_TENT4A_S3.depth.bed.gz"], "TENT4B": ["GSM4396392_TENT4B_S4.depth.bed.gz", "GSM4396394_TENT4B_2nd.depth.bed.gz"], "H3K9ac": ["GSM4310190_Vehicle_1_K9ac_peaks.bed.gz", "GSM4310187_TGF_beta_2_K9ac_peaks.bed.gz", "GSM4310185_TGF_beta_1_K9ac_peaks.bed.gz", "GSM4310192_Vehicle_2_K9ac_peaks.bed.gz"], "SMAD3": ["GSM4310198_H69_5TGF_beta_3_SMAD3_peaks.bed.gz", "GSM4310194_H69_4Vehicle_3_SMAD3_peaks.bed.gz", "GSM4310197_H69_4TGF_beta_3_SMAD3_peaks.bed.gz", "GSM4310195_H69_5Vehicle_3_SMAD3_peaks.bed.gz"], "Rabbit affinity-purified anti-H3K9ac Active Motif 39137 - lot: 16918002": ["GSM4001131_T47D_H3K9ac_Serum_peaks.bed.gz", "GSM4001132_T47D_H3K9ac_noSerum_peaks.bed.gz"], "in house anti-GTF3C2 rabbit polyclonal": ["GSM4001134_siCTRL_TFIIIC_peaks.bed.gz", "GSM4001133_siADNP_TFIIIC_peaks.bed.gz"], "Mouse Monoclonal anti-H3K27ac Millipore Cat. 17-683. Lot.2626032": ["GSM4001136_T47D_H3K27ac_noSerum_peaks.bed.gz", "GSM4001135_T47D_H3K27ac_Serum_peaks.bed.gz"], "Novus Biologicals (NB100-606570)": ["GSM4001137_comb_T47D_GTF3C1_T0_peaks.bed.gz"], "SC-28198 and SC-271514 (Santa Cruz Biotechnology)": ["GSM3715311_CTCF_CT_peaks.bed.gz", "GSM3715312_RM_CTCF_KD_peaks.bed.gz", "GSM3715313_RM_CTCF_OE_peaks.bed.gz", "GSM3715313_CTCF_OE_peaks.bed.gz", "GSM3715312_CTCF_KD_peaks.bed.gz", "GSM3715311_RM_CTCF_CT_peaks.bed.gz"], "ab8580 (abcam)": ["GSM3715314_H3K4me3_CT_peaks.bed.gz", "GSM3715315_H3K4me3_KD_peaks.bed.gz"], "ab6002 (abcam)": ["GSM3715317_H3K9me3_KD_peaks.bed.gz", "GSM3715316_H3K9me3_CT_peaks.bed.gz"], "SC-130356 (Santa Cruz Biotechnology)": ["GSM3715318_H3K27me3_CT_peaks.bed.gz", "GSM3715319_H3K27me3_KD_peaks.bed.gz"], "none (input)": ["GSM3715320_Input_peaks.bed.gz"], "H3K27ac (ab4729)": ["GSM3316869_AML_P21_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316877_AML_P25_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316868_AML_P21_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316872_AML_P23_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316857_AML_P12_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316873_AML_P23_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316865_AML_P19_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316881_AML_P27_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316858_AML_P13_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316862_AML_P16_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316854_AML_P9_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316864_AML_P18_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316867_AML_P20_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316853_AML_P8_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316876_AML_P25_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316846_AML_P1_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316870_AML_P22_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316879_AML_P26_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316850_AML_P5_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316855_AML_P10_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316875_AML_P24_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316859_AML_P14_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316847_AML_P2_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316871_AML_P22_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316874_AML_P24_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316852_AML_P7_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316861_AML_P16_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316856_AML_P11_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316878_AML_P26_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316848_AML_P3_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316849_AML_P4_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316880_AML_P27_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316866_AML_P20_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316863_AML_P17_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316851_AML_P6_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316860_AML_P15_Dx_H3K27ac_peaks.narrowPeak.gz"], "anti-m6A (ab151230)": ["GSM3682899_ZCCHC4KO1_bc4.C2T.m6A.kmer.onlyDRACH.appended.bed.gz", "GSM3682897_METTL5KO1_bc7.C2T.m6A.kmer.onlyDRACH.appended.bed.gz", "GSM3682896_WT2_bc5.C2T.m6A.kmer.onlyDRACH.appended.bed.gz", "GSM3682898_METTL5KO2_bc8.C2T.m6A.kmer.onlyDRACH.appended.bed.gz", "GSM3682895_WT1_bc2.C2T.m6A.kmer.onlyDRACH.appended.bed.gz", "GSM3682900_ZCCHC4KO2_bc9.C2T.m6A.kmer.onlyDRACH.appended.bed.gz"], "anti-H3K27ac (Active motif, 39133)": ["GSM3605899_LV1400.replicated.broadPeak.gz", "GSM3605930_LV1392.replicated.broadPeak.gz", "GSM3605945_12569_PCW10.replicated.broadPeak.gz", "GSM3605934_LV1437.replicated.broadPeak.gz", "GSM3605895_LV1325.replicated.broadPeak.gz", "GSM3605879_LV1200.replicated.broadPeak.gz", "GSM3605928_LV1371.replicated.broadPeak.gz", "GSM3605932_LV1433.replicated.broadPeak.gz", "GSM3605947_12570_LV_PCW17.replicated.broadPeak.gz", "GSM3605897_LV1356.replicated.broadPeak.gz", "GSM3605891_LV1277.replicated.broadPeak.gz", "GSM3605918_LV1264.replicated.broadPeak.gz", "GSM3605882_LV1215.replicated.broadPeak.gz", "GSM3605923_LV1300.replicated.broadPeak.gz", "GSM3605937_LV1535.replicated.broadPeak.gz", "GSM3605890_LV1273.replicated.broadPeak.gz", "GSM3605936_LV1532.replicated.broadPeak.gz", "GSM3605901_LV1452.replicated.broadPeak.gz", "GSM3605910_LV1033.replicated.broadPeak.gz", "GSM3605893_LV1294.replicated.broadPeak.gz", "GSM3605925_LV1304.replicated.broadPeak.gz", "GSM3605906_LV1009.replicated.broadPeak.gz", "GSM3605912_LV1072.replicated.broadPeak.gz", "GSM3605919_LV1275.replicated.broadPeak.gz", "GSM3605939_11963_CS22.replicated.broadPeak.gz", "GSM3605873_LV1121.replicated.broadPeak.gz", "GSM3605908_LV1028.replicated.broadPeak.gz", "GSM3605877_LV1183.replicated.broadPeak.gz", "GSM3605875_LV1160.replicated.broadPeak.gz", "GSM3605927_LV1342.replicated.broadPeak.gz", "GSM3605884_LV1226.replicated.broadPeak.gz", "GSM3605914_LV1223.replicated.broadPeak.gz", "GSM3605888_LV1259.replicated.broadPeak.gz", "GSM3605921_LV1290.replicated.broadPeak.gz", "GSM3605880_LV1202.replicated.broadPeak.gz", "GSM3605904_LV1558.replicated.broadPeak.gz", "GSM3605941_12434_PCW10.replicated.broadPeak.gz", "GSM3605916_LV1262.replicated.broadPeak.gz", "GSM3605903_LV1471.replicated.broadPeak.gz", "GSM3605943_12522_PCW10.replicated.broadPeak.gz", "GSM3605886_LV1248.replicated.broadPeak.gz"], "YAP/TAZ (D24E4) Rabbit mAb (Cell signalling)": ["GSM2486584_lane22IP_peaks.Converted.bed.gz", "GSM2486584_lane22IP_peaks.bed.gz", "GSM2486582_lane21IP_peaks.Converted.bed.gz", "GSM2486582_lane21IP_peaks.bed.gz"], "5ug anti-phosphoT487-BMYB (ab76009, ABCAM)": ["GSM3560178_MYBB_r1881_G2_1_MACS2_summits.bed.gz", "GSM3560180_MYBB_G3_R1881_MACS2_summits.bed.gz", "GSM3560179_MYBB_dmso_G2_1_MACS2_summits.bed.gz", "GSM3560181_MYBB_G3_DMSO_MACS2_summits.bed.gz"], "anti-PARP1 antibody (Active Motif 39559)": ["GSM2508007_COMBINED_PARalyzer.bed.gz"], "m6A-antibody (202003; Synaptic Systems)": ["GSM2464931_HEC.wt14.bed.gz", "GSM2464901_1642no.bed.gz", "GSM2464929_HEC.shM3.bed.gz", "GSM2464925_HEC.mu14.bed.gz", "GSM2464923_42.bed.gz", "GSM2464903_1642tu.bed.gz", "GSM2464905_1806N.bed.gz", "GSM2464917_35.bed.gz", "GSM2464909_1820N.bed.gz", "GSM2464919_36.bed.gz", "GSM2464927_HEC.shC.bed.gz", "GSM2464907_1806T.bed.gz", "GSM2464913_1834N.bed.gz", "GSM2464915_1834T.bed.gz", "GSM2464911_1820T.bed.gz", "GSM2464921_41.bed.gz"], "Kap1 (AbCam 10483)": ["GSM2230418_NS_Trim28.peaks.bed.gz"], "H3K9me3 (Active Motif, cat # 39161)": ["GSM2230419_NS_h3k9me3.broad.bed.gz"]}, "cell_source": {"Human umbilical cord blood": ["GSM5328659_FOSL2_R2_peaks.narrowPeak.gz", "GSM5328653_FOSL1_C-12_R1_peaks.narrowPeak.gz", "GSM5328651_BATF_R3_peaks.narrowPeak.gz", "GSM5328655_FOSL1_C-12_R2_peaks.narrowPeak.gz", "GSM5328657_FOSL2_R1_peaks.narrowPeak.gz", "GSM5328649_BATF_R1_peaks.narrowPeak.gz"], "NANOS3\u2013tdTomato hESCs bearing Dex-inducible SOX17 and Dox-inducible PRDM1 transgenes": ["GSM4836897_SOX17_hPGCLC_r1_peaks.narrowPeak.gz", "GSM4836894_PRDM1_hPGCLC_r2_peaks.narrowPeak.gz", "GSM4836893_PRDM1_hPGCLC_r1_peaks.narrowPeak.gz", "GSM4836896_SOX17_hDE_r2_peaks.narrowPeak.gz", "GSM4836898_SOX17_hPGCLC_r3_peaks.narrowPeak.gz", "GSM4836895_SOX17_hDE_r1_peaks.narrowPeak.gz"]}, "sex": {"male": ["GSM3692195_C31B.2_peaks.broadPeak.gz", "GSM3692192_C23B.2_peaks.broadPeak.gz", "GSM3692189_aD7.2_peaks.broadPeak.gz", "GSM5681661_UVA045_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692176_ad7-thra1_peaks.narrowPeak.gz", "GSM5681673_UVA015_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz", "GSM3692158_201704_atf4_peaks.narrowPeak.gz", "GSM3692170_2018001-olig2_peaks.narrowPeak.gz", "GSM3692164_2016029_olig2_peaks.narrowPeak.gz", "GSM3692186_aD18.2_peaks.broadPeak.gz", "GSM5681656_UVA079_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681667_UVA030_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681675_UVA069_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681682_UVA008_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz", "GSM3692163_2016018_olig2_peaks.narrowPeak.gz", "GSM5681651_UVA108_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681657_UVA009_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692179_c31-thra1_peaks.narrowPeak.gz", "GSM3692194_C31.2_peaks.broadPeak.gz", "GSM5681653_UVA007_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692151_2016018_atf4_peaks.narrowPeak.gz", "GSM5681665_UVA057_CA_ATAC_3_peaks_rmBlacklist.narrowPeak.gz", "GSM3692154_2017011_atf4_peaks.narrowPeak.gz", "GSM5681649_UVA019_CA_ATAC_3_peaks_rmBlacklist.narrowPeak.gz", "GSM5681650_UVA067_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681654_UVA066_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692162_20138_olig2_peaks.narrowPeak.gz", "GSM5681652_UVA049_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692165_2017011_olig2_peaks.narrowPeak.gz", "GSM3692150_20138_atf4_peaks.narrowPeak.gz", "GSM3692177_c13-thra1_peaks.narrowPeak.gz", "GSM3692168_2017039-olig2_peaks.narrowPeak.gz", "GSM3692169_201704_olig2_peaks.narrowPeak.gz", "GSM3692172_20180807-thra1_peaks.narrowPeak.gz", "GSM3692157_2017039-atf4_peaks.narrowPeak.gz", "GSM5681659_UVA064_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692152_2016029_atf4_peaks.narrowPeak.gz", "GSM5681655_UVA083_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692190_C13.2_peaks.broadPeak.gz", "GSM5681663_UVA014_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz", "GSM3692193_C25.2_peaks.broadPeak.gz", "GSM5681666_UVA040_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692175_ad1-thra1_peaks.narrowPeak.gz", "GSM5681678_UVA061_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692178_c23-thra1_peaks.narrowPeak.gz", "GSM3692159_2018001-atf4_peaks.narrowPeak.gz", "GSM5681683_UVA062_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "female": ["GSM5681679_UVA005_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681681_UVA039_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692156_2017025-atf4_peaks.narrowPeak.gz", "GSM5681672_UVA080_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692166_2017014_olig2_peaks.narrowPeak.gz", "GSM3692171_2018006-olig2_peaks.narrowPeak.gz", "GSM3692161_20134_olig2_peaks.narrowPeak.gz", "GSM3692160_2018006-atf4_peaks.narrowPeak.gz", "GSM5681669_UVA058_CA_ATAC_1_peaks_rmBlacklist.narrowPeak.gz", "GSM3692173_ad11-thra1_peaks.narrowPeak.gz", "GSM3692187_aD2.2_peaks.broadPeak.gz", "GSM5681671_UVA053_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692174_ad16-thra1_peaks.narrowPeak.gz", "GSM3692184_aD11.2_peaks.broadPeak.gz", "GSM5681677_UVA112_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692188_aD21.2_peaks.broadPeak.gz", "GSM3692149_20134_atf4_peaks.narrowPeak.gz", "GSM5681676_UVA094_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681664_UVA020_CA_ATAC_2_peaks_rmBlacklist.narrowPeak.gz", "GSM5681680_UVA054_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681660_UVA027_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681670_UVA050_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692155_2017014_atf4_peaks.narrowPeak.gz", "GSM3692167_2017025-olig2_peaks.narrowPeak.gz", "GSM3692185_aD16.2_peaks.broadPeak.gz", "GSM5681662_UVA023_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692191_C13B.2_peaks.broadPeak.gz", "GSM5681668_UVA046_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM5681658_UVA068_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz", "GSM3692153_2017001_atf4_peaks.narrowPeak.gz", "GSM5681674_UVA036_CA_ATAC_peaks_rmBlacklist.narrowPeak.gz"], "Male": ["GSM4758357_L2_bio1_con_TKD180802548_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758351_L2_bio1_act_TKD180802547_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758362_L3_bio6_con_TKD180802558_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758361_L3_bio5_con_TKD180901492_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758355_L3_bio5_act_TKD180802555_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758356_L3_bio6_act_TKD180901493_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"], "Female": ["GSM4758358_L2_bio2_con_TKD180802550_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758360_L3_bio4_con_TKD180802554_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758359_L2_bio3_con_TKD180802552_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758352_L2_bio2_act_TKD180901491_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758354_L3_bio4_act_TKD180802553_HT3VLCCXY_L5_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz", "GSM4758353_L2_bio3_act_TKD180802551_HT3VLCCXY_L4_1.trim.merged.nodup.tn5.pval0.01.300K.bfilt.narrowPeak.gz"]}, "antibody_details": {"prostate cancer": ["GSM5655509_SI_30280.bed.gz", "GSM5655508_SI_30279.bed.gz", "GSM5655510_SI_30281.bed.gz", "GSM5655507_SI_30278.bed.gz"]}, "disease_stage": {"surrogate normal": ["GSM5133441_45_Chip_K4me3.bed.gz", "GSM5133444_Hu1545_H3K27me3.bed.gz", "GSM5133451_Hu1545_HCV-ATAC.bed.gz", "GSM5133448_45_HCV_K4me1.bed.gz", "GSM5133443_45_Chip_K27Ac.bed.gz", "GSM5133449_45_HCV_K27Ac.bed.gz", "GSM5133442_45_Chip_K4me1.bed.gz", "GSM5133450_Hu1545_HCV_H3K27me3.bed.gz", "GSM5133447_45_HCV_K4me3.bed.gz", "GSM5133445_Hu1545-ATAC.bed.gz"], "HCC": ["GSM5133459_7_5_HCV_K4me3.bed.gz", "GSM5133455_7_5_Chip_K27Ac.bed.gz", "GSM5133454_7_5_Chip_K4me1.bed.gz", "GSM5133457_Huh75-ATAC.bed.gz", "GSM5133460_7_5_HCV_K4me1.bed.gz", "GSM5133453_7_5_Chip_K4me3.bed.gz", "GSM5133456_Huh75_H3K27me3.bed.gz", "GSM5133461_7_5_HCV_K27Ac.bed.gz", "GSM5133463_Huh75_HCV-ATAC.bed.gz", "GSM5133462_Huh75_HCV_H3K27me3.bed.gz"]}, "cell_line_source": {"Derived from LNCaP cells developed to be castration resistant": ["GSM5575321_V16D-Rep1-H3K27me3_peaks.broadPeak.gz", "GSM5575330_V16D-H19-Rep1-H3K27me3_peaks.broadPeak.gz", "GSM5575331_V16D-H19-Rep2-H3K27me3_peaks.broadPeak.gz", "GSM5575327_V16D-H19-Rep1-H3K4me3_peaks.narrowPeak.gz", "GSM5575332_V16D-H19-Rep3-H3K27me3_peaks.broadPeak.gz", "GSM5575320_V16D-Rep3-H3K4me3_peaks.narrowPeak.gz", "GSM5575319_V16D-Rep2-H3K4me3_peaks.narrowPeak.gz", "GSM5575329_V16D-H19-Rep3-H3K4me3_peaks.narrowPeak.gz", "GSM5575328_V16D-H19-Rep2-H3K4me3_peaks.narrowPeak.gz", "GSM5575323_V16D-Rep3-H3K27me3_peaks.broadPeak.gz", "GSM5575322_V16D-Rep2-H3K27me3_peaks.broadPeak.gz", "GSM5575318_V16D-Rep1-H3K4me3_peaks.narrowPeak.gz"]}, "ipsc_source": {"Human Embryonic Stem cells": ["GSM5121219_KLF4_naive_rep2.narrowPeak.gz", "GSM5121220_KLF4_primed.narrowPeak.gz", "GSM5121147_Naive_BRG1_WT.narrowPeak.gz", "GSM5121157_Primed_BRG1_HET.narrowPeak.gz", "GSM5121218_KLF4_naive_rep1.narrowPeak.gz", "GSM5121148_Naive_BRG1_HET.narrowPeak.gz", "GSM5121150_Naive_BRG1_KO_rep2.narrowPeak.gz", "GSM5121153_Re-Priming_BRG1_KO_rep1.narrowPeak.gz", "GSM5121155_Re-Priming_BRG1_KO_rep3.narrowPeak.gz", "GSM5121151_Re-Priming_BRG1_WT.narrowPeak.gz", 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["GSM3316869_AML_P21_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316877_AML_P25_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316868_AML_P21_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316872_AML_P23_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316857_AML_P12_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316873_AML_P23_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316865_AML_P19_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316881_AML_P27_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316858_AML_P13_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316862_AML_P16_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316854_AML_P9_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316864_AML_P18_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316867_AML_P20_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316853_AML_P8_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316876_AML_P25_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316846_AML_P1_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316870_AML_P22_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316879_AML_P26_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316850_AML_P5_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316855_AML_P10_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316875_AML_P24_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316859_AML_P14_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316847_AML_P2_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316871_AML_P22_Rel_H3K27ac_peaks.narrowPeak.gz", "GSM3316874_AML_P24_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316852_AML_P7_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316861_AML_P16_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316856_AML_P11_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316878_AML_P26_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316848_AML_P3_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316849_AML_P4_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316880_AML_P27_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316866_AML_P20_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316863_AML_P17_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316851_AML_P6_Dx_H3K27ac_peaks.narrowPeak.gz", "GSM3316860_AML_P15_Dx_H3K27ac_peaks.narrowPeak.gz"], "-": 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"GSM3605943_12522_PCW10.replicated.broadPeak.gz", "GSM3605886_LV1248.replicated.broadPeak.gz"], "idiopathic dilated cardiomyopathy (DCM)": ["GSM3605936_LV1532.replicated.broadPeak.gz", "GSM3605930_LV1392.replicated.broadPeak.gz", "GSM3605908_LV1028.replicated.broadPeak.gz", "GSM3605910_LV1033.replicated.broadPeak.gz", "GSM3605934_LV1437.replicated.broadPeak.gz", "GSM3605921_LV1290.replicated.broadPeak.gz", "GSM3605925_LV1304.replicated.broadPeak.gz", "GSM3605928_LV1371.replicated.broadPeak.gz", "GSM3605932_LV1433.replicated.broadPeak.gz", "GSM3605906_LV1009.replicated.broadPeak.gz", "GSM3605918_LV1264.replicated.broadPeak.gz", "GSM3605923_LV1300.replicated.broadPeak.gz", "GSM3605927_LV1342.replicated.broadPeak.gz", "GSM3605916_LV1262.replicated.broadPeak.gz", "GSM3605912_LV1072.replicated.broadPeak.gz", "GSM3605937_LV1535.replicated.broadPeak.gz", "GSM3605919_LV1275.replicated.broadPeak.gz", "GSM3605914_LV1223.replicated.broadPeak.gz"], "endometrial cancer": ["GSM2464901_1642no.bed.gz", "GSM2464923_42.bed.gz", "GSM2464903_1642tu.bed.gz", "GSM2464905_1806N.bed.gz", "GSM2464917_35.bed.gz", "GSM2464909_1820N.bed.gz", "GSM2464919_36.bed.gz", "GSM2464907_1806T.bed.gz", "GSM2464913_1834N.bed.gz", "GSM2464915_1834T.bed.gz", "GSM2464911_1820T.bed.gz", "GSM2464921_41.bed.gz"]}, "subject_status": {"Healthy control": ["GSM4629479_H3K4me3_C1_HC_4.bam_peaks.broadPeak.gz", "GSM4629477_H3K4me3_C1_HC_2.bam_peaks.broadPeak.gz", "GSM4629478_H3K4me3_C1_HC_3.bam_peaks.broadPeak.gz", "GSM4629480_H3K4me3_C1_HC_5.bam_peaks.broadPeak.gz", "GSM4629476_H3K4me3_C1_HC_1.bam_peaks.broadPeak.gz"], "Rheumatoid Arthritis": ["GSM4629484_H3K4me3_C1_RA_4.bam_peaks.broadPeak.gz", "GSM4629486_H3K4me3_C1_RA_6.bam_peaks.broadPeak.gz", "GSM4629491_H3K4me3_C1_RA_11.bam_peaks.broadPeak.gz", "GSM4629487_H3K4me3_C1_RA_7.bam_peaks.broadPeak.gz", "GSM4629482_H3K4me3_C1_RA_2.bam_peaks.broadPeak.gz", "GSM4629483_H3K4me3_C1_RA_3.bam_peaks.broadPeak.gz", "GSM4629488_H3K4me3_C1_RA_8.bam_peaks.broadPeak.gz", "GSM4629481_H3K4me3_C1_RA_1.bam_peaks.broadPeak.gz", "GSM4629490_H3K4me3_C1_RA_10.bam_peaks.broadPeak.gz", "GSM4629489_H3K4me3_C1_RA_9.bam_peaks.broadPeak.gz", "GSM4629485_H3K4me3_C1_RA_5.bam_peaks.broadPeak.gz"], "control": ["GSM4289313_MACS2_callpeak_on_data_170_and_data_146_broad_Peaks.bed.gz", "GSM4289309_MACS2_callpeak_on_data_170_and_data_138_broad_Peaks.bed.gz", "GSM4289305_MACS2_callpeak_on_data_170_and_data_132_broad_Peaks.bed.gz", "GSM4289314_MACS2_callpeak_on_data_170_and_data_148_broad_Peaks.bed.gz", "GSM4289310_MACS2_callpeak_on_data_170_and_data_140_broad_Peaks.bed.gz", "GSM4289312_MACS2_callpeak_on_data_170_and_data_144_broad_Peaks.bed.gz", "GSM4289315_MACS2_callpeak_on_data_170_and_data_150_broad_Peaks.bed.gz", "GSM4289308_MACS2_callpeak_on_data_170_and_data_136_broad_Peaks.bed.gz", "GSM4289307_MACS2_callpeak_on_data_170_and_data_134_broad_Peaks.bed.gz", "GSM4289311_MACS2_callpeak_on_data_170_and_data_142_broad_Peaks.bed.gz"], "huntington's disease (HD)": ["GSM4289318_MACS2_callpeak_on_data_170_and_data_158_broad_Peaks.bed.gz", "GSM4289322_MACS2_callpeak_on_data_170_and_data_166_broad_Peaks.bed.gz", "GSM4289320_MACS2_callpeak_on_data_170_and_data_162_broad_Peaks.bed.gz", "GSM4289319_MACS2_callpeak_on_data_170_and_data_160_broad_Peaks.bed.gz", "GSM4289316_MACS2_callpeak_on_data_170_and_data_154_broad_Peaks.bed.gz", "GSM4289321_MACS2_callpeak_on_data_170_and_data_164_broad_Peaks.bed.gz", "GSM4289317_MACS2_callpeak_on_data_170_and_data_156_broad_Peaks.bed.gz"]}, "description": {"CD31 MACs cell at D4": ["GSM4159486_ATACseq_D4pDOXRep2.bed.gz", "GSM4159485_ATACseq_D4pDOXRep1.bed.gz", "GSM4159484_ATACseq_D4mDOXRep2.bed.gz", "GSM4159483_ATACseq_D4mDOXRep1.bed.gz"], "control": ["GSM4201823_Basal1_ChIP_peaks.narrowPeak.gz", "GSM4201834_Luminal2_ChIP_peaks.narrowPeak.gz", "GSM4201833_Luminal1_ChIP_peaks.narrowPeak.gz", "GSM4201669_Luminal1_ATAC_peaks.narrowPeak.gz", "GSM4201662_Basal2_ATAC_peaks.narrowPeak.gz", "GSM4201661_Basal1_ATAC_peaks.narrowPeak.gz", "GSM4201670_Luminal2_ATAC_peaks.narrowPeak.gz", "GSM4201824_Basal2_ChIP_peaks.narrowPeak.gz"], "FOXA1 was overexpressed in basal tumor organoid": ["GSM4201663_Basal1_FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz", "GSM4201826_Basal2_FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201825_Basal1_FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201664_Basal2_FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz"], "BMP4, 5 were overexpressed in surrounding reconstituted CAF": ["GSM4201668_Basal2_BMP_o.e_CAF-FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz", "GSM4201830_Basal2_BMP_o.e_CAF-FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201665_Basal1_BMP_o.e_CAF_ATAC_peaks.narrowPeak.gz", "GSM4201666_Basal2_BMP_o.e_CAF_ATAC_peaks.narrowPeak.gz", "GSM4201827_Basal1_BMP_o.e_CAF_ChIP_peaks.narrowPeak.gz", "GSM4201828_Basal2_BMP_o.e_CAF_ChIP_peaks.narrowPeak.gz", "GSM4201829_Basal1_BMP_o.e_CAF-FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201667_Basal1_BMP_o.e_CAF-FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz"], "FOXA1 was knocked out in luminal tumor organoid": ["GSM4201836_Luminal2_FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201672_Luminal2_FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz", "GSM4201835_Luminal1_FOXA1_k.o_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201671_Luminal1_FOXA1_k.o_tumor_ATAC_peaks.narrowPeak.gz"], "BMP4, 5 were knocked out in surrounding reconstituted CAF": ["GSM4201675_Luminal1_BMP_k.o_CAF-FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz", "GSM4201839_Luminal1_BMP_k.o_CAF-FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201673_Luminal1_BMP_k.o_CAF_ATAC_peaks.narrowPeak.gz", "GSM4201674_Luminal2_BMP_k.o_CAF_ATAC_peaks.narrowPeak.gz", "GSM4201676_Luminal2_BMP_k.o_CAF-FOXA1_o.e_tumor_ATAC_peaks.narrowPeak.gz", "GSM4201838_Luminal2_BMP_k.o_CAF_ChIP_peaks.narrowPeak.gz", "GSM4201840_Luminal2_BMP_k.o_CAF-FOXA1_o.e_tumor_ChIP_peaks.narrowPeak.gz", "GSM4201837_Luminal1_BMP_k.o_CAF_ChIP_peaks.narrowPeak.gz"]}, "cell_identity": {"Paraxial mesoderm derived from H9 (WA09) human embryonic stem cells": ["GSM4506443_H9PM.narrowPeak.gz"], "Brown adipocytes differentiated from H9ESC derived paraxial mesoderm at differentiation time point day 4": ["GSM4506444_H9BA_D4.narrowPeak.gz"], "Brown adipocytes differentiated from H9ESC derived paraxial mesoderm at differentiation time point day 8": ["GSM4506445_H9BA_D8.narrowPeak.gz"], "Brown adipocytes differentiated from H9ESC derived paraxial mesoderm at differentiation time point day 15": ["GSM4506446_H9BA_D15.narrowPeak.gz"], "Brown adipocytes differentiated from H9ESC derived paraxial mesoderm at differentiation time point day 20": ["GSM4506447_H9BA_D20.narrowPeak.gz"], "Brown adipocytes differentiated from H9ESC derived paraxial mesoderm at differentiation time point day 24": ["GSM4506448_H9BA_D24.narrowPeak.gz"]}, 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