Microarray Data Analysis and Visualization
by Arun Jagota, Tom J. Downey
Category: DNA microarrays

What microarray data is and what we can learn from it. What statistics has to offer. Preprocessing microarray data. Measuring (DIS) similarity of expression patterns. Visualizing microarray data. Cluster analysis of microarray data. Identifying genes expressed unusually in a sample. Identifying genes expressed significantly in a population. Identifying genes expressed differently in two populations. Classifying samples from two populations. Identifying genes expressed differently in paired samples. Identifying genes expressed differently in more than two populations. Inferring gene regulation networks.