Материалы:NC 002516

```
LOCUS NC_002516 6264404 bp DNA circular BCT 20-DEC-2006
DEFINITION Pseudomonas aeruginosa PAO1, complete genome.
ACCESSION NC_002516
VERSION NC_002516.2 GI:110645304
KEYWORDS .
SOURCE Pseudomonas aeruginosa PAO1
ORGANISM Pseudomonas aeruginosa PAO1
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6264404)
AUTHORS Winsor,G.L., Lo,R., Sui,S.J., Ung,K.S., Huang,S., Cheng,D.,
Ching,W.K., Hancock,R.E. and Brinkman,F.S.
TITLE Pseudomonas aeruginosa Genome Database and PseudoCAP: facilitating
community-based, continually updated, genome annotation
JOURNAL Nucleic Acids Res. 33 (DATABASE ISSUE), D338-D343 (2005)
PUBMED 15608211
REFERENCE 2 (bases 1 to 6264404)
AUTHORS Stover,C.K., Pham,X.-Q.T., Erwin,A.L., Mizoguchi,S.D., Warrener,P.,
Hickey,M.J., Brinkman,F.S.L., Hufnagle,W.O., Kowalik,D.J.,
Lagrou,M., Garber,R.L., Goltry,L., Tolentino,E.,
Westbrook-Wadman,S., Yuan,Y., Brody,L.L., Coulter,S.N.,
Folger,K.R., Kas,A., Larbig,K., Lim,R.M., Smith,K.A., Spencer,D.H.,
Wong,G.K.-S., Wu,Z., Paulsen,I.T., Reizer,J., Saier,M.H.,
Hancock,R.E.W., Lory,S. and Olson,M.V.
TITLE Complete genome sequence of Pseudomonas aeruginosa PA01, an
opportunistic pathogen
JOURNAL Nature 406 (6799), 959-964 (2000)
PUBMED 10984043
REFERENCE 3 (bases 1 to 6264404)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2001) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (bases 1 to 6264404)
AUTHORS Stover,C.K., Pham,X.-Q.T., Erwin,A.L., Mizoguchi,S.D., Warrener,P.,
Hickey,M.J., Brinkman,F.S.L., Hufnagle,W.O., Kowalik,D.J.,
Lagrou,M., Garber,R.L., Goltry,L., Tolentino,E.,
Westbrock-Wadman,S., Yuan,Y., Brody,L.L., Coulter,S.N.,
Folger,K.R., Kas,A., Larbig,K., Lim,R.M., Smith,K.A., Spencer,D.H.,
Wong,G.K.-S., Wu,Z., Paulsen,I.T., Reizer,J., Saier,M.H.,
Hancock,R.E.W., Lory,S. and Olson,M.V.
TITLE Direct Submission
JOURNAL Submitted (16-MAY-2000) Department of Medicine and Genetics,
University of Washington Genome Center, University Of Washington,
Box 352145, Seattle, WA 98195, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE004091.
On Jul 24, 2006 this sequence version replaced gi:15595198.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

298816 | 298892 | - | 77 | 110645304 | PA0263.1 | - | 11 Arg tRNA
|

586867 | 586990 | + | 124 | 110645304 | PA0527.1 | - | regulatory RNA RsmY |

630434 | 630510 | - | 77 | 110645304 | PA0574.1 | - | 16 Met tRNA
|

722096 | 723631 | + | 1536 | 110645304 | PA0668.1 | - | 16S ribosomal RNA |

723696 | 723772 | + | 77 | 110645304 | PA0668.2 | - | 14 Ile tRNA
|

723801 | 723876 | + | 76 | 110645304 | PA0668.3 | - | 02 Ala tRNA
|

724103 | 726993 | + | 2891 | 110645304 | PA0668.4 | - | 23S ribosomal RNA |

727136 | 727255 | + | 120 | 110645304 | PA0668.5 | - | 5S ribosomal RNA |

797721 | 797794 | - | 74 | 110645304 | PA0729.1 | - | 01 Gly tRNA
|

901520 | 901872 | - | 353 | 110645304 | PA0826.2 | - | tmRNA |

991260 | 991350 | + | 91 | 110645304 | PA0905.1 | - | 08 Ser tRNA
|

991468 | 991544 | + | 77 | 110645304 | PA0905.2 | - | 11 Arg tRNA
|

991656 | 991732 | + | 77 | 110645304 | PA0905.3 | - | 11 Arg tRNA
|

1007727 | 1007803 | - | 77 | 110645304 | PA0922.1 | - | 16 Met tRNA
|

1060356 | 1060431 | + | 76 | 110645304 | PA0976.1 | - | 10 Lys tRNA
|

1096867 | 1096956 | + | 90 | 110645304 | PA1013.1 | - | 08 Ser tRNA
|

1668840 | 1669799 | + | 960 | 110645304 | PA1530.1 | - | 4.5S ribosomal RNA |

1947320 | 1947396 | + | 77 | 110645304 | PA1796.1 | - | 11 Arg tRNA
|

1947448 | 1947523 | + | 76 | 110645304 | PA1796.2 | - | 09 His tRNA
|

1947578 | 1947662 | + | 85 | 110645304 | PA1796.3 | - | 15 Leu tRNA
|

1947729 | 1947804 | + | 76 | 110645304 | PA1796.4 | - | 09 His tRNA
|

1959083 | 1959159 | + | 77 | 110645304 | PA1804.1 | - | 06 Asp tRNA
|

2905965 | 2906051 | - | 87 | 110645304 | PA2570.1 | - | 15 Leu tRNA
|

2918603 | 2918676 | - | 74 | 110645304 | PA2581.1 | - | 19 Cys tRNA
|

2923222 | 2923297 | - | 76 | 110645304 | PA2583.1 | - | 01 Gly tRNA
|

2947583 | 2947672 | - | 90 | 110645304 | PA2603.1 | - | 08 Ser tRNA
|

3099306 | 3099382 | - | 77 | 110645304 | PA2736.1 | - | 03 Pro tRNA
|

3133449 | 3133525 | - | 77 | 110645304 | PA2775.1 | - | 13 Val tRNA
|

3173599 | 3173674 | - | 76 | 110645304 | PA2819.1 | - | 01 Gly tRNA
|

3173759 | 3173834 | - | 76 | 110645304 | PA2819.2 | - | 01 Gly tRNA
|

3173837 | 3173912 | - | 76 | 110645304 | PA2819.3 | - | 04 Glu tRNA
|

3206408 | 3206497 | + | 90 | 110645304 | PA2852.1 | - | 08 Ser tRNA
|

3395190 | 3395266 | + | 77 | 110645304 | PA3031.1 | - | 03 Pro tRNA
|

3475457 | 3475533 | - | 77 | 110645304 | PA3094.1 | - | 06 Asp tRNA
|

3475648 | 3475724 | - | 77 | 110645304 | PA3094.2 | - | 06 Asp tRNA
|

3475741 | 3475816 | - | 76 | 110645304 | PA3094.3 | - | 13 Val tRNA
|

3514723 | 3514798 | - | 76 | 110645304 | PA3133.1 | - | 04 Glu tRNA
|

3514845 | 3514920 | - | 76 | 110645304 | PA3133.2 | - | 02 Ala tRNA
|

3515014 | 3515089 | - | 76 | 110645304 | PA3133.3 | - | 04 Glu tRNA
|

3515138 | 3515213 | - | 76 | 110645304 | PA3133.4 | - | 02 Ala tRNA
|

3524012 | 3524087 | + | 76 | 110645304 | PA3139.1 | - | 07 Asn tRNA
|

3650722 | 3650798 | - | 77 | 110645304 | PA3262.1 | - | 06 Asp tRNA
|

3650815 | 3650890 | - | 76 | 110645304 | PA3262.2 | - | 13 Val tRNA
|

3778654 | 3778730 | - | 77 | 110645304 | PA3368.1 | - | 11 Arg tRNA
|

4057543 | 4057658 | - | 116 | 110645304 | PA3621.1 | - | regulatory RNA RsmZ |

4281665 | 4281751 | + | 87 | 110645304 | PA3824.1 | - | 15 Leu tRNA
|

4784184 | 4784259 | - | 76 | 110645304 | PA4276.1 | - | 20 Trp tRNA
|

4785593 | 4785668 | - | 76 | 110645304 | PA4277.1 | - | 12 Thr tRNA
|

4785688 | 4785761 | - | 74 | 110645304 | PA4277.2 | - | 01 Gly tRNA
|

4785788 | 4785872 | - | 85 | 110645304 | PA4277.3 | - | 18 Tyr tRNA
|

4788574 | 4788693 | - | 120 | 110645304 | PA4280.1 | - | 5S ribosomal RNA |

4788836 | 4791724 | - | 2889 | 110645304 | PA4280.2 | - | 23S ribosomal RNA |

4791951 | 4792026 | - | 76 | 110645304 | PA4280.3 | - | 02 Ala tRNA
|

4792055 | 4792131 | - | 77 | 110645304 | PA4280.4 | - | 14 Ile tRNA
|

4792196 | 4793731 | - | 1536 | 110645304 | PA4280.5 | - | 16S ribosomal RNA |

5068932 | 5069007 | - | 76 | 110645304 | PA4524.1 | - | 12 Thr tRNA
|

5086925 | 5087000 | - | 76 | 110645304 | PA4541.1 | - | 10 Lys tRNA
|

5087011 | 5087087 | - | 77 | 110645304 | PA4541.2 | - | 03 Pro tRNA
|

5087097 | 5087172 | - | 76 | 110645304 | PA4541.3 | - | 07 Asn tRNA
|

5131082 | 5131155 | + | 74 | 110645304 | PA4581.1 | - | 11 Arg tRNA
|

5238277 | 5238351 | + | 75 | 110645304 | PA4669.1 | - | 05 Gln tRNA
|

5242026 | 5242102 | + | 77 | 110645304 | PA4673.1 | - | 16 Met tRNA
|

5264100 | 5264219 | - | 120 | 110645304 | PA4690.1 | - | 5S ribosomal RNA |

5264362 | 5267252 | - | 2891 | 110645304 | PA4690.2 | - | 23S ribosomal RNA |

5267479 | 5267554 | - | 76 | 110645304 | PA4690.3 | - | 02 Ala tRNA
|

5267583 | 5267659 | - | 77 | 110645304 | PA4690.4 | - | 14 Ile tRNA
|

5267724 | 5269259 | - | 1536 | 110645304 | PA4690.5 | - | 16S ribosomal RNA |

5283960 | 5284110 | + | 151 | 110645304 | PA4704.1 | - | regulatory RNA PrrF1 |

5284172 | 5284319 | + | 148 | 110645304 | PA4704.2 | - | regulatory RNA PrrF2 |

5332087 | 5332163 | - | 77 | 110645304 | PA4746.1 | - | 16 Met tRNA
|

5332254 | 5332339 | - | 86 | 110645304 | PA4746.2 | - | 15 Leu tRNA
|

5387766 | 5387857 | - | 92 | 110645304 | PA4802.1 | - | Sec tRNA |

5541614 | 5541700 | + | 87 | 110645304 | PA4937.1 | - | 15 Leu tRNA
|

5541830 | 5541916 | + | 87 | 110645304 | PA4937.2 | - | 15 Leu tRNA
|

5798560 | 5798635 | + | 76 | 110645304 | PA5149.1 | - | 17 Phe tRNA
|

5809970 | 5810045 | + | 76 | 110645304 | PA5160.1 | - | 12 Thr tRNA
|

6039584 | 6039703 | - | 120 | 110645304 | PA5369.1 | - | 5S ribosomal RNA |

6039846 | 6042736 | - | 2891 | 110645304 | PA5369.2 | - | 23S ribosomal RNA |

6042963 | 6043038 | - | 76 | 110645304 | PA5369.3 | - | 02 Ala tRNA
|

6043067 | 6043143 | - | 77 | 110645304 | PA5369.4 | - | 14 Ile tRNA
|

6043208 | 6044743 | - | 1536 | 110645304 | PA5369.5 | - | 16S ribosomal RNA |