Материалы:NC 004547

```
LOCUS NC_004547 5064019 bp DNA circular BCT 02-DEC-2005
DEFINITION Erwinia carotovora subsp. atroseptica SCRI1043, complete genome.
ACCESSION NC_004547
VERSION NC_004547.2 GI:50118965
KEYWORDS complete genome.
SOURCE Erwinia carotovora subsp. atroseptica SCRI1043
ORGANISM Erwinia carotovora subsp. atroseptica SCRI1043
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Pectobacterium.
REFERENCE 1 (bases 1 to 5064019)
AUTHORS Bell,K.S., Sebaihia,M., Pritchard,L., Holden,M.T., Hyman,L.J.,
Holeva,M.C., Thomson,N.R., Bentley,S.D., Churcher,L.J., Mungall,K.,
Atkin,R., Bason,N., Brooks,K., Chillingworth,T., Clark,K.,
Doggett,J., Fraser,A., Hance,Z., Hauser,H., Jagels,K., Moule,S.,
Norbertczak,H., Ormond,D., Price,C., Quail,M.A., Sanders,M.,
Walker,D., Whitehead,S., Salmond,G.P., Birch,P.R., Parkhill,J. and
Toth,I.K.
TITLE Genome sequence of the enterobacterial phytopathogen Erwinia
carotovora subsp. atroseptica and characterization of virulence
factors
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (30), 11105-11110 (2004)
PUBMED 15263089
REFERENCE 2 (bases 1 to 5064019)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5064019)
CONSRTM NCBI Microbial Genomes Annotation Project
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BX950851.
On Jul 9, 2004 this sequence version replaced gi:28850470.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

16895 | 18438 | + | 1544 | 50118965 | ECAr001 | - | 16S ribosomal RNA |

18580 | 18655 | + | 76 | 50118965 | ECAt001 | - | 04 Glu tRNA
|

18884 | 21791 | + | 2908 | 50118965 | ECAr002 | - | 23S ribosomal RNA |

21919 | 22038 | + | 120 | 50118965 | ECAr003 | - | 5S ribosomal RNA |

28751 | 28868 | + | 118 | 50118965 | ECAs001 | - | |

55285 | 55361 | + | 77 | 50118965 | ECAt002 | - | 03 Pro tRNA
|

240628 | 242170 | + | 1543 | 50118965 | ECAr004 | - | 16S ribosomal RNA |

242245 | 242321 | + | 77 | 50118965 | ECAt003 | - | 14 Ile tRNA
|

242364 | 242439 | + | 76 | 50118965 | ECAt004 | - | 02 Ala tRNA
|

242656 | 245563 | + | 2908 | 50118965 | ECAr005 | - | 23S ribosomal RNA |

245691 | 245810 | + | 120 | 50118965 | ECAr006 | - | 5S ribosomal RNA |

249788 | 249863 | + | 76 | 50118965 | ECAt005 | - | 12 Thr tRNA
|

249879 | 249963 | + | 85 | 50118965 | ECAt006 | - | 18 Tyr tRNA
|

250093 | 250167 | + | 75 | 50118965 | ECAt007 | - | 01 Gly tRNA
|

250174 | 250249 | + | 76 | 50118965 | ECAt008 | - | 12 Thr tRNA
|

273556 | 273693 | - | 138 | 50118965 | ECAs002 | - | |

282456 | 283998 | + | 1543 | 50118965 | ECAr007 | - | 16S ribosomal RNA |

284073 | 284149 | + | 77 | 50118965 | ECAt009 | - | 14 Ile tRNA
|

284192 | 284267 | + | 76 | 50118965 | ECAt010 | - | 02 Ala tRNA
|

284484 | 287391 | + | 2908 | 50118965 | ECAr008 | - | 23S ribosomal RNA |

287519 | 287638 | + | 120 | 50118965 | ECAr009 | - | 5S ribosomal RNA |

373579 | 373881 | + | 303 | 50118965 | ECAs003 | - | |

465940 | 466024 | + | 85 | 50118965 | ECAt011 | - | 15 Leu tRNA
|

526656 | 526839 | + | 184 | 50118965 | ECAs004 | - | |

688584 | 688659 | - | 76 | 50118965 | ECAt012 | - | 17 Phe tRNA
|

726565 | 726764 | - | 200 | 50118965 | ECAs005 | - | |

750486 | 750561 | - | 76 | 50118965 | ECAt013 | - | 16 Met tRNA
|

773027 | 773113 | + | 87 | 50118965 | ECAt014 | - | 15 Leu tRNA
|

776983 | 777059 | + | 77 | 50118965 | ECAt015 | - | 16 Met tRNA
|

783488 | 783604 | + | 117 | 50118965 | ECAs006 | - | ribosomal S15 gene leader |

783836 | 784004 | - | 169 | 50118965 | ECAs007 | - | |

806751 | 806837 | + | 87 | 50118965 | ECAt016 | - | 15 Leu tRNA
|

806915 | 807001 | + | 87 | 50118965 | ECAt017 | - | 15 Leu tRNA
|

807076 | 807162 | + | 87 | 50118965 | ECAt018 | - | 15 Leu tRNA
|

847939 | 848012 | + | 74 | 50118965 | ECAt019 | - | 01 Gly tRNA
|

926946 | 927308 | - | 363 | 50118965 | ECAs008 | - | |

1001971 | 1002171 | + | 201 | 50118965 | ECAs009 | - | |

1075223 | 1075298 | - | 76 | 50118965 | ECAt020 | - | 17 Phe tRNA
|

1121082 | 1121158 | - | 77 | 50118965 | ECAt021 | - | 16 Met tRNA
|

1121207 | 1121283 | - | 77 | 50118965 | ECAt022 | - | 16 Met tRNA
|

1121332 | 1121408 | - | 77 | 50118965 | ECAt023 | - | 16 Met tRNA
|

1137209 | 1137283 | - | 75 | 50118965 | ECAs010 | - | |

1144373 | 1144720 | + | 348 | 50118965 | ECAs011 | - | |

1154216 | 1154372 | + | 157 | 50118965 | ECAs012 | - | |

1320488 | 1320609 | + | 122 | 50118965 | ECAs013 | - | |

1496589 | 1496662 | - | 74 | 50118965 | ECAt024 | - | 05 Gln tRNA
|

1496669 | 1496745 | - | 77 | 50118965 | ECAt025 | - | 16 Met tRNA
|

1496800 | 1496874 | - | 75 | 50118965 | ECAt026 | - | 05 Gln tRNA
|

1496910 | 1496984 | - | 75 | 50118965 | ECAt027 | - | 05 Gln tRNA
|

1497041 | 1497125 | - | 85 | 50118965 | ECAt028 | - | 15 Leu tRNA
|

1497133 | 1497209 | - | 77 | 50118965 | ECAt029 | - | 16 Met tRNA
|

1556667 | 1556742 | + | 76 | 50118965 | ECAt030 | - | 10 Lys tRNA
|

1556938 | 1557013 | + | 76 | 50118965 | ECAt031 | - | 10 Lys tRNA
|

1586840 | 1586927 | + | 88 | 50118965 | ECAt032 | - | 08 Ser tRNA
|

1727911 | 1727986 | - | 76 | 50118965 | ECAt033 | - | 07 Asn tRNA
|

1927139 | 1927214 | - | 76 | 50118965 | ECAt034 | - | 07 Asn tRNA
|

1989132 | 1989221 | - | 90 | 50118965 | ECAt035 | - | 08 Ser tRNA
|

2012343 | 2012430 | + | 88 | 50118965 | ECAt036 | - | 08 Ser tRNA
|

2038031 | 2038368 | - | 338 | 50118965 | ECAs014 | - | |

2106158 | 2106269 | - | 112 | 50118965 | ECAs015 | - | |

2159593 | 2159669 | - | 77 | 50118965 | ECAt037 | - | 13 Val tRNA
|

2179660 | 2179736 | - | 77 | 50118965 | ECAt038 | - | 13 Val tRNA
|

2247607 | 2247703 | + | 97 | 50118965 | ECAs016 | - | |

2643735 | 2643819 | + | 85 | 50118965 | ECAt039 | - | 18 Tyr tRNA
|

2786690 | 2786788 | - | 99 | 50118965 | ECAs017 | - | |

2786697 | 2786830 | + | 134 | 50118965 | ECAs018 | - | |

2846049 | 2846138 | + | 90 | 50118965 | ECAt040 | - | 08 Ser tRNA
|

3091867 | 3091943 | + | 77 | 50118965 | ECAt041 | - | 03 Pro tRNA
|

3227600 | 3227686 | - | 87 | 50118965 | ECAt042 | - | 15 Leu tRNA
|

3227695 | 3227768 | - | 74 | 50118965 | ECAt043 | - | 19 Cys tRNA
|

3227820 | 3227895 | - | 76 | 50118965 | ECAt044 | - | 01 Gly tRNA
|

3232835 | 3232910 | - | 76 | 50118965 | ECAt045 | - | 10 Lys tRNA
|

3236126 | 3236201 | + | 76 | 50118965 | ECAt046 | - | 07 Asn tRNA
|

3446540 | 3446614 | + | 75 | 50118965 | ECAt047 | - | 11 Arg tRNA
|

3483053 | 3483129 | + | 77 | 50118965 | ECAt048 | - | 11 Arg tRNA
|

3578398 | 3578494 | - | 97 | 50118965 | ECAs019 | - | |

3695406 | 3695481 | - | 76 | 50118965 | ECAt049 | - | 02 Ala tRNA
|

3695529 | 3695604 | - | 76 | 50118965 | ECAt050 | - | 02 Ala tRNA
|

3698520 | 3698595 | + | 76 | 50118965 | ECAt051 | - | 13 Val tRNA
|

3698654 | 3698729 | + | 76 | 50118965 | ECAt052 | - | 13 Val tRNA
|

3698797 | 3698872 | + | 76 | 50118965 | ECAt053 | - | 13 Val tRNA
|

3698880 | 3698955 | + | 76 | 50118965 | ECAt054 | - | 10 Lys tRNA
|

3748710 | 3748786 | - | 77 | 50118965 | ECAt055 | - | 06 Asp tRNA
|

3754266 | 3754342 | - | 77 | 50118965 | ECAt056 | - | 06 Asp tRNA
|

3754393 | 3754512 | - | 120 | 50118965 | ECAr010 | - | 5S ribosomal RNA |

3754640 | 3757547 | - | 2908 | 50118965 | ECAr011 | - | 23S ribosomal RNA |

3757776 | 3757851 | - | 76 | 50118965 | ECAt057 | - | 04 Glu tRNA
|

3757993 | 3759535 | - | 1543 | 50118965 | ECAr012 | - | 16S ribosomal RNA |

3777866 | 3777938 | + | 73 | 50118965 | ECAs020 | - | |

3781091 | 3781167 | - | 77 | 50118965 | ECAt058 | - | 11 Arg tRNA
|

3781221 | 3781297 | - | 77 | 50118965 | ECAt059 | - | 11 Arg tRNA
|

3781369 | 3781445 | - | 77 | 50118965 | ECAt060 | - | 11 Arg tRNA
|

3781454 | 3781546 | - | 93 | 50118965 | ECAt061 | - | 08 Ser tRNA
|

3880169 | 3880244 | - | 76 | 50118965 | ECAt062 | - | 12 Thr tRNA
|

3945847 | 3945967 | - | 121 | 50118965 | ECAr013 | - | 5S ribosomal RNA |

3946001 | 3946076 | - | 76 | 50118965 | ECAt063 | - | 12 Thr tRNA
|

3946093 | 3946212 | - | 120 | 50118965 | ECAr014 | - | 5S ribosomal RNA |

3946340 | 3949247 | - | 2908 | 50118965 | ECAr015 | - | 23S ribosomal RNA |

3949476 | 3949551 | - | 76 | 50118965 | ECAt064 | - | 04 Glu tRNA
|

3949693 | 3951235 | - | 1543 | 50118965 | ECAr016 | - | 16S ribosomal RNA |

4090515 | 4090605 | - | 91 | 50118965 | ECAs021 | - | |

4296610 | 4296706 | + | 97 | 50118965 | ECAs022 | - | |

4416625 | 4416700 | - | 76 | 50118965 | ECAt065 | - | 01 Gly tRNA
|

4434381 | 4434456 | - | 76 | 50118965 | ECAt066 | - | 01 Gly tRNA
|

4434533 | 4434608 | - | 76 | 50118965 | ECAt067 | - | 01 Gly tRNA
|

4472319 | 4472438 | - | 120 | 50118965 | ECAr017 | - | 5S ribosomal RNA |

4472566 | 4475473 | - | 2908 | 50118965 | ECAr018 | - | 23S ribosomal RNA |

4475679 | 4475754 | - | 76 | 50118965 | ECAt068 | - | 02 Ala tRNA
|

4475797 | 4475873 | - | 77 | 50118965 | ECAt069 | - | 14 Ile tRNA
|

4475948 | 4477490 | - | 1543 | 50118965 | ECAr019 | - | 16S ribosomal RNA |

4490506 | 4490617 | - | 112 | 50118965 | ECAs023 | - | |

4651380 | 4651485 | - | 106 | 50118965 | ECAs024 | - | |

4692513 | 4692589 | - | 77 | 50118965 | ECAt070 | - | 03 Pro tRNA
|

4692633 | 4692719 | - | 87 | 50118965 | ECAt071 | - | 15 Leu tRNA
|

4692769 | 4692844 | - | 76 | 50118965 | ECAt072 | - | 09 His tRNA
|

4692961 | 4693037 | - | 77 | 50118965 | ECAt073 | - | 11 Arg tRNA
|

4741571 | 4741646 | - | 76 | 50118965 | ECAt074 | - | 20 Trp tRNA
|

4741701 | 4741777 | - | 77 | 50118965 | ECAt075 | - | 06 Asp tRNA
|

4741828 | 4741947 | - | 120 | 50118965 | ECAr020 | - | 5S ribosomal RNA |

4742075 | 4744982 | - | 2908 | 50118965 | ECAr021 | - | 23S ribosomal RNA |

4745211 | 4745286 | - | 76 | 50118965 | ECAt076 | - | 04 Glu tRNA
|

4745428 | 4746970 | - | 1543 | 50118965 | ECAr022 | - | 16S ribosomal RNA |