Материалы:NC 006840

```
LOCUS NC_006840 2906179 bp DNA circular BCT 03-APR-2006
DEFINITION Vibrio fischeri ES114 chromosome I, complete sequence.
ACCESSION NC_006840
VERSION NC_006840.1 GI:59710607
KEYWORDS .
SOURCE Vibrio fischeri ES114
ORGANISM Vibrio fischeri ES114
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
Vibrionaceae; Vibrio.
REFERENCE 1 (bases 1 to 2906179)
AUTHORS Ruby,E.G., Urbanowski,M., Campbell,J., Dunn,A., Faini,M.,
Gunsalus,R., Lostroh,P., Lupp,C., McCann,J., Millikan,D.,
Schaefer,A., Stabb,E., Stevens,A., Visick,K., Whistler,C. and
Greenberg,E.P.
TITLE Complete genome sequence of Vibrio fischeri: a symbiotic bacterium
with pathogenic congeners
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 102 (8), 3004-3009 (2005)
PUBMED 15703294
REFERENCE 2 (bases 1 to 2906179)
AUTHORS .
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (14-FEB-2005) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2906179)
AUTHORS Ruby,E.G., Urbanowski,M., Campbell,J.W., Dunn,A., Faini,M.A.,
Gunsalus,R.P., Lostroh,P., Lupp,C., McCann,J.R., Millikan,D.S.,
Schaefer,A.L., Stabb,E.V., Stevens,A.M., Visick,K.L., Whistler,C.A.
and Greenberg,E.P.
TITLE Direct Submission
JOURNAL Submitted (16-SEP-2004) Kewalo Marine Laboratory, and W.M. Keck
Microbial Communities and Cell Signaling Program, University of
Hawaii, Honolulu, HI 96081, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000020.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

31800 | 31876 | + | 77 | 59710607 | VFT0001 | - | 20 Trp tRNA
|

347254 | 348800 | + | 1547 | 59710607 | VFR0001 | - | small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA |

348868 | 348943 | + | 76 | 59710607 | VFT0002 | - | 04 Glu tRNA
|

349219 | 352109 | + | 2891 | 59710607 | VFR0002 | - | large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA |

352203 | 352323 | + | 121 | 59710607 | VFR0003 | - | 5S RNA |

352727 | 354272 | + | 1546 | 59710607 | VFR0004 | - | small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA |

354342 | 354418 | + | 77 | 59710607 | VFT0003 | - | 14 Ile tRNA
|

354456 | 354531 | + | 76 | 59710607 | VFT0004 | - | 02 Ala tRNA
|

354805 | 357695 | + | 2891 | 59710607 | VFR0005 | - | large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA |

357784 | 357904 | + | 121 | 59710607 | VFR0006 | - | 5S RNA |

357934 | 358010 | + | 77 | 59710607 | VFT0005 | - | 06 Asp tRNA
|

447875 | 447959 | + | 85 | 59710607 | VFT0006 | - | 15 Leu tRNA
|

448881 | 448956 | - | 76 | 59710607 | VFT0007 | - | 07 Asn tRNA
|

448963 | 449038 | - | 76 | 59710607 | VFT0008 | - | 17 Phe tRNA
|

449046 | 449121 | - | 76 | 59710607 | VFT0009 | - | 12 Thr tRNA
|

449195 | 449270 | - | 76 | 59710607 | VFT0010 | - | 07 Asn tRNA
|

449304 | 449379 | - | 76 | 59710607 | VFT0011 | - | 12 Thr tRNA
|

449421 | 449496 | - | 76 | 59710607 | VFT0012 | - | 07 Asn tRNA
|

449503 | 449578 | - | 76 | 59710607 | VFT0013 | - | 17 Phe tRNA
|

449586 | 449661 | - | 76 | 59710607 | VFT0014 | - | 12 Thr tRNA
|

449737 | 449812 | - | 76 | 59710607 | VFT0015 | - | 17 Phe tRNA
|

519278 | 519362 | + | 85 | 59710607 | VFT0016 | - | 15 Leu tRNA
|

583353 | 583444 | + | 92 | 59710607 | VFT0017 | - | 08 Ser tRNA
|

583498 | 583574 | + | 77 | 59710607 | VFT0018 | - | 11 Arg tRNA
|

583614 | 583705 | + | 92 | 59710607 | VFT0019 | - | 08 Ser tRNA
|

583756 | 583832 | + | 77 | 59710607 | VFT0020 | - | 11 Arg tRNA
|

583900 | 583976 | + | 77 | 59710607 | VFT0021 | - | 11 Arg tRNA
|

584044 | 584120 | + | 77 | 59710607 | VFT0022 | - | 11 Arg tRNA
|

584188 | 584264 | + | 77 | 59710607 | VFT0023 | - | 11 Arg tRNA
|

584811 | 584887 | + | 77 | 59710607 | VFT0024 | - | 11 Arg tRNA
|

584952 | 585028 | + | 77 | 59710607 | VFT0025 | - | 11 Arg tRNA
|

617478 | 619023 | + | 1546 | 59710607 | VFR0007 | - | small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA |

619384 | 622274 | + | 2891 | 59710607 | VFR0008 | - | large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA |

622367 | 622487 | + | 121 | 59710607 | VFR0009 | - | 5S RNA |

622567 | 622643 | + | 77 | 59710607 | VFT0026 | - | 06 Asp tRNA
|

622680 | 622756 | + | 77 | 59710607 | VFT0027 | - | 20 Trp tRNA
|

830929 | 831003 | - | 75 | 59710607 | VFT0028 | - | 05 Gln tRNA
|

831029 | 831113 | - | 85 | 59710607 | VFT0029 | - | 15 Leu tRNA
|

831199 | 831275 | - | 77 | 59710607 | VFT0030 | - | 16 Met tRNA
|

831286 | 831370 | - | 85 | 59710607 | VFT0031 | - | 15 Leu tRNA
|

831451 | 831525 | - | 75 | 59710607 | VFT0032 | - | 05 Gln tRNA
|

831555 | 831631 | - | 77 | 59710607 | VFT0033 | - | 16 Met tRNA
|

831642 | 831726 | - | 85 | 59710607 | VFT0034 | - | 15 Leu tRNA
|

831807 | 831881 | - | 75 | 59710607 | VFT0035 | - | 05 Gln tRNA
|

831907 | 831991 | - | 85 | 59710607 | VFT0036 | - | 15 Leu tRNA
|

832072 | 832146 | - | 75 | 59710607 | VFT0037 | - | 05 Gln tRNA
|

832172 | 832256 | - | 85 | 59710607 | VFT0038 | - | 15 Leu tRNA
|

832337 | 832411 | - | 75 | 59710607 | VFT0039 | - | 05 Gln tRNA
|

832437 | 832521 | - | 85 | 59710607 | VFT0040 | - | 15 Leu tRNA
|

832600 | 832676 | - | 77 | 59710607 | VFT0041 | - | 16 Met tRNA
|

852745 | 852821 | + | 77 | 59710607 | VFT0042 | - | 03 Pro tRNA
|

1030930 | 1031005 | - | 76 | 59710607 | VFT0043 | - | 07 Asn tRNA
|

1031065 | 1031140 | - | 76 | 59710607 | VFT0044 | - | 07 Asn tRNA
|

1061957 | 1062044 | + | 88 | 59710607 | VFT0045 | - | 08 Ser tRNA
|

1389613 | 1389689 | + | 77 | 59710607 | VFT0046 | - | 13 Val tRNA
|

1389767 | 1389843 | + | 77 | 59710607 | VFT0047 | - | 13 Val tRNA
|

1758426 | 1758512 | - | 87 | 59710607 | VFT0048 | - | 15 Leu tRNA
|

1758590 | 1758665 | - | 76 | 59710607 | VFT0049 | - | 01 Gly tRNA
|

1758680 | 1758753 | - | 74 | 59710607 | VFT0050 | - | 19 Cys tRNA
|

1758794 | 1758880 | - | 87 | 59710607 | VFT0051 | - | 15 Leu tRNA
|

1758993 | 1759068 | - | 76 | 59710607 | VFT0052 | - | 01 Gly tRNA
|

1759082 | 1759155 | - | 74 | 59710607 | VFT0053 | - | 19 Cys tRNA
|

1775883 | 1775966 | + | 84 | 59710607 | VFT0054 | - | 18 Tyr tRNA
|

1776049 | 1776132 | + | 84 | 59710607 | VFT0055 | - | 18 Tyr tRNA
|

1776215 | 1776298 | + | 84 | 59710607 | VFT0056 | - | 18 Tyr tRNA
|

1776381 | 1776464 | + | 84 | 59710607 | VFT0057 | - | 18 Tyr tRNA
|

1776547 | 1776630 | + | 84 | 59710607 | VFT0058 | - | 18 Tyr tRNA
|

1827827 | 1827902 | - | 76 | 59710607 | VFT0059 | - | 01 Gly tRNA
|

1827936 | 1828022 | - | 87 | 59710607 | VFT0060 | - | 15 Leu tRNA
|

1828100 | 1828175 | - | 76 | 59710607 | VFT0061 | - | 01 Gly tRNA
|

1828195 | 1828269 | - | 75 | 59710607 | VFT0062 | - | 19 Cys tRNA
|

1862531 | 1862621 | + | 91 | 59710607 | VFT0063 | - | 08 Ser tRNA
|

1862660 | 1862736 | + | 77 | 59710607 | VFT0064 | - | 06 Asp tRNA
|

1863827 | 1863917 | + | 91 | 59710607 | VFT0065 | - | 08 Ser tRNA
|

1864254 | 1864344 | + | 91 | 59710607 | VFT0066 | - | 08 Ser tRNA
|

1999181 | 1999257 | - | 77 | 59710607 | VFT0067 | - | 11 Arg tRNA
|

2374361 | 2374437 | - | 77 | 59710607 | VFT0068 | - | 06 Asp tRNA
|

2374467 | 2374587 | - | 121 | 59710607 | VFR0010 | - | 5S RNA |

2374676 | 2377566 | - | 2891 | 59710607 | VFR0011 | - | large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA |

2377915 | 2377990 | - | 76 | 59710607 | VFT0069 | - | 04 Glu tRNA
|

2378059 | 2379602 | - | 1544 | 59710607 | VFR0012 | - | small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA |

2426708 | 2426784 | - | 77 | 59710607 | VFT0070 | - | 06 Asp tRNA
|

2426814 | 2426934 | - | 121 | 59710607 | VFR0013 | - | 5S RNA |

2427023 | 2429913 | - | 2891 | 59710607 | VFR0014 | - | large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA |

2430291 | 2430366 | - | 76 | 59710607 | VFT0071 | - | 02 Ala tRNA
|

2430404 | 2430480 | - | 77 | 59710607 | VFT0072 | - | 14 Ile tRNA
|

2430551 | 2432094 | - | 1544 | 59710607 | VFR0015 | - | small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA |

2434498 | 2434573 | - | 76 | 59710607 | VFT0073 | - | 07 Asn tRNA
|

2434603 | 2434678 | - | 76 | 59710607 | VFT0074 | - | 12 Thr tRNA
|

2434731 | 2434806 | - | 76 | 59710607 | VFT0075 | - | 17 Phe tRNA
|

2537274 | 2537349 | + | 76 | 59710607 | VFT0076 | - | 16 Met tRNA
|

2624710 | 2624785 | - | 76 | 59710607 | VFT0077 | - | 01 Gly tRNA
|

2624818 | 2624894 | - | 77 | 59710607 | VFT0078 | - | 16 Met tRNA
|

2624955 | 2625031 | - | 77 | 59710607 | VFT0079 | - | 01 Gly tRNA
|

2625064 | 2625140 | - | 77 | 59710607 | VFT0080 | - | 16 Met tRNA
|

2625201 | 2625276 | - | 76 | 59710607 | VFT0081 | - | 01 Gly tRNA
|

2625309 | 2625385 | - | 77 | 59710607 | VFT0082 | - | 16 Met tRNA
|

2625457 | 2625532 | - | 76 | 59710607 | VFT0083 | - | 01 Gly tRNA
|

2716690 | 2716765 | - | 76 | 59710607 | VFT0084 | - | 12 Thr tRNA
|

2716778 | 2716852 | - | 75 | 59710607 | VFT0085 | - | 01 Gly tRNA
|

2716888 | 2716971 | - | 84 | 59710607 | VFT0086 | - | 18 Tyr tRNA
|

2717005 | 2717080 | - | 76 | 59710607 | VFT0087 | - | 12 Thr tRNA
|

2722606 | 2722682 | - | 77 | 59710607 | VFT0088 | - | 06 Asp tRNA
|

2722712 | 2722832 | - | 121 | 59710607 | VFR0016 | - | 5S RNA |

2722926 | 2725816 | - | 2891 | 59710607 | VFR0017 | - | large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA |

2726098 | 2726173 | - | 76 | 59710607 | VFT0089 | - | 13 Val tRNA
|

2726205 | 2726280 | - | 76 | 59710607 | VFT0090 | - | 02 Ala tRNA
|

2726305 | 2726380 | - | 76 | 59710607 | VFT0091 | - | 10 Lys tRNA
|

2726383 | 2726458 | - | 76 | 59710607 | VFT0092 | - | 04 Glu tRNA
|

2726555 | 2728097 | - | 1543 | 59710607 | VFR0018 | - | small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA |

2728501 | 2728621 | - | 121 | 59710607 | VFR0019 | - | 5S RNA |

2728711 | 2731601 | - | 2891 | 59710607 | VFR0020 | - | large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA |

2731869 | 2731944 | - | 76 | 59710607 | VFT0093 | - | 02 Ala tRNA
|

2731982 | 2732058 | - | 77 | 59710607 | VFT0094 | - | 14 Ile tRNA
|

2732129 | 2733672 | - | 1544 | 59710607 | VFR0021 | - | small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA |

2734077 | 2734197 | - | 121 | 59710607 | VFR0022 | - | 5S RNA |

2734291 | 2737181 | - | 2891 | 59710607 | VFR0023 | - | large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA |

2737466 | 2737541 | - | 76 | 59710607 | VFT0095 | - | 02 Ala tRNA
|

2737610 | 2739153 | - | 1544 | 59710607 | VFR0024 | - | small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA |

2834860 | 2834936 | - | 77 | 59710607 | VFT0096 | - | 03 Pro tRNA
|

2835009 | 2835084 | - | 76 | 59710607 | VFT0097 | - | 09 His tRNA
|

2835126 | 2835202 | - | 77 | 59710607 | VFT0098 | - | 03 Pro tRNA
|

2835275 | 2835350 | - | 76 | 59710607 | VFT0099 | - | 09 His tRNA
|

2835386 | 2835462 | - | 77 | 59710607 | VFT0100 | - | 11 Arg tRNA
|

2847344 | 2847462 | - | 119 | 59710607 | VFR0025 | - | 5S RNA |

2847478 | 2847554 | - | 77 | 59710607 | VFT0101 | - | 12 Thr tRNA
|

2847616 | 2847736 | - | 121 | 59710607 | VFR0026 | - | 5S RNA |

2847825 | 2850715 | - | 2891 | 59710607 | VFR0027 | - | large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA |

2850983 | 2851058 | - | 76 | 59710607 | VFT0102 | - | 13 Val tRNA
|

2851090 | 2851165 | - | 76 | 59710607 | VFT0103 | - | 10 Lys tRNA
|

2851168 | 2851243 | - | 76 | 59710607 | VFT0104 | - | 04 Glu tRNA
|

2851340 | 2852883 | - | 1544 | 59710607 | VFR0028 | - | small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA |

2853287 | 2853407 | - | 121 | 59710607 | VFR0029 | - | 5S RNA |

2853497 | 2856388 | - | 2892 | 59710607 | VFR0030 | - | large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA |

2856656 | 2856731 | - | 76 | 59710607 | VFT0105 | - | 13 Val tRNA
|

2856763 | 2856838 | - | 76 | 59710607 | VFT0106 | - | 10 Lys tRNA
|

2856841 | 2856916 | - | 76 | 59710607 | VFT0107 | - | 04 Glu tRNA
|

2857013 | 2858556 | - | 1544 | 59710607 | VFR0031 | - | small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA |

2858960 | 2859080 | - | 121 | 59710607 | VFR0032 | - | 5S RNA |

2859169 | 2862059 | - | 2891 | 59710607 | VFR0033 | - | large subunit ribosomal RNA; lsuRNA; 23S ribosomal RNA |

2862385 | 2863928 | - | 1544 | 59710607 | VFR0034 | - | small subunit ribosomal RNA; ssuRNA; 16S ribosomal RNA |