Материалы:NC 007354

LOCUS NC_007354 1315030 bp DNA circular BCT 16-AUG-2007 DEFINITION Ehrlichia canis str. Jake, complete genome. ACCESSION NC_007354 VERSION NC_007354.1 GI:73666633 KEYWORDS . SOURCE Ehrlichia canis str. Jake ORGANISM Ehrlichia canis str. Jake Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Ehrlichia. REFERENCE 1 (bases 1 to 1315030) AUTHORS Mavromatis,K., Doyle,C.K., Lykidis,A., Ivanova,N., Francino,M.P., Chain,P., Shin,M., Malfatti,S., Larimer,F., Copeland,A., Detter,J.C., Land,M., Richardson,P.M., Yu,X.J., Walker,D.H., McBride,J.W. and Kyrpides,N.C. TITLE The genome of the obligately intracellular bacterium Ehrlichia canis reveals themes of complex membrane structure and immune evasion strategies JOURNAL J. Bacteriol. 188 (11), 4015-4023 (2006) PUBMED 16707693 REFERENCE 2 (bases 1 to 1315030) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-AUG-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1315030) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Mavrommatis,K. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (25-JUL-2005) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000107. URL -- http://www.jgi.doe.gov Source DNA and bacteria available fro Jere McBride (jemcbrid@utmb.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LLNL Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

338 | 415 | + | 78 | 73666633 | Ecaj_R0001 | - | 11 Arg tRNA
|

2234 | 2308 | - | 75 | 73666633 | Ecaj_R0002 | - | 05 Gln tRNA
|

27185 | 27275 | - | 91 | 73666633 | Ecaj_R0003 | - | 15 Leu tRNA
|

47712 | 47785 | + | 74 | 73666633 | Ecaj_R0004 | - | 13 Val tRNA
|

69588 | 69660 | + | 73 | 73666633 | Ecaj_R0005 | - | 10 Lys tRNA
|

75718 | 75792 | - | 75 | 73666633 | Ecaj_R0006 | - | 19 Cys tRNA
|

156010 | 156093 | - | 84 | 73666633 | Ecaj_R0007 | - | 15 Leu tRNA
|

167065 | 167143 | + | 79 | 73666633 | Ecaj_R0008 | - | 03 Pro tRNA
|

167568 | 167655 | - | 88 | 73666633 | Ecaj_R0009 | - | 08 Ser tRNA
|

190571 | 190643 | + | 73 | 73666633 | Ecaj_R0010 | - | 02 Ala tRNA
|

245349 | 245425 | + | 77 | 73666633 | Ecaj_R0011 | - | 20 Trp tRNA
|

259386 | 259459 | + | 74 | 73666633 | Ecaj_R0012 | - | 11 Arg tRNA
|

285955 | 287439 | + | 1485 | 73666633 | Ecaj_R0013 | - | 16S ribosomal RNA |

292601 | 292687 | + | 87 | 73666633 | Ecaj_R0014 | - | 15 Leu tRNA
|

300143 | 300215 | + | 73 | 73666633 | Ecaj_R0015 | - | 10 Lys tRNA
|

300396 | 300479 | + | 84 | 73666633 | Ecaj_R0016 | - | 15 Leu tRNA
|

307599 | 307673 | + | 75 | 73666633 | Ecaj_R0017 | - | 16 Met tRNA
|

360915 | 360990 | + | 76 | 73666633 | Ecaj_R0018 | - | 01 Gly tRNA
|

412218 | 412291 | + | 74 | 73666633 | Ecaj_R0019 | - | 06 Asp tRNA
|

488998 | 489297 | - | 300 | 73666633 | Ecaj_R0020 | - | tmRNA |

489431 | 489503 | - | 73 | 73666633 | Ecaj_R0021 | - | 07 Asn tRNA
|

494191 | 494263 | - | 73 | 73666633 | Ecaj_R0022 | - | 17 Phe tRNA
|

503811 | 503887 | - | 77 | 73666633 | Ecaj_R0023 | - | 11 Arg tRNA
|

548477 | 548551 | + | 75 | 73666633 | Ecaj_R0024 | - | 16 Met tRNA
|

557852 | 557927 | + | 76 | 73666633 | Ecaj_R0025 | - | 16 Met tRNA
|

571075 | 571165 | + | 91 | 73666633 | Ecaj_R0026 | - | 08 Ser tRNA
|

592048 | 592120 | + | 73 | 73666633 | Ecaj_R0027 | - | 12 Thr tRNA
|

640728 | 640798 | - | 71 | 73666633 | Ecaj_R0028 | - | 12 Thr tRNA
|

668794 | 668877 | + | 84 | 73666633 | Ecaj_R0029 | - | 15 Leu tRNA
|

710743 | 710819 | - | 77 | 73666633 | Ecaj_R0030 | - | 14 Ile tRNA
|

727749 | 727825 | - | 77 | 73666633 | Ecaj_R0031 | - | 03 Pro tRNA
|

784352 | 784424 | - | 73 | 73666633 | Ecaj_R0032 | - | 11 Arg tRNA
|

825376 | 825448 | - | 73 | 73666633 | Ecaj_R0033 | - | 04 Glu tRNA
|

865093 | 865163 | - | 71 | 73666633 | Ecaj_R0034 | - | 01 Gly tRNA
|

865171 | 865253 | - | 83 | 73666633 | Ecaj_R0035 | - | 18 Tyr tRNA
|

922361 | 922647 | + | 287 | 73666633 | Ecaj_R0036 | - | RNA component of RNaseP |

958691 | 958763 | - | 73 | 73666633 | Ecaj_R0037 | - | 13 Val tRNA
|

1098799 | 1098918 | - | 120 | 73666633 | Ecaj_R0038 | - | 5S ribosomal RNA |

1098983 | 1101781 | - | 2799 | 73666633 | Ecaj_R0039 | - | 23S ribosomal RNA |

1115358 | 1115430 | - | 73 | 73666633 | Ecaj_R0040 | - | 09 His tRNA
|

1233731 | 1233821 | + | 91 | 73666633 | Ecaj_R0041 | - | 08 Ser tRNA
|

1309522 | 1309613 | + | 92 | 73666633 | Ecaj_R0042 | - | SRP RNA; RNA component of signal recognition particle |