Материалы:NC 002488

```
LOCUS NC_002488 2679306 bp DNA circular BCT 02-DEC-2005
DEFINITION Xylella fastidiosa 9a5c, complete genome.
ACCESSION NC_002488
VERSION NC_002488.3 GI:57014152
KEYWORDS .
SOURCE Xylella fastidiosa 9a5c
ORGANISM Xylella fastidiosa 9a5c
Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
Xanthomonadaceae; Xylella.
REFERENCE 1 (bases 1 to 2679306)
AUTHORS Simpson,A.J.G., Reinach,F.C., Arruda,P., Abreu,F.A., Acencio,M.,
Alvarenga,R., Alves,L.M.C., Araya,J.E., Baia,G.S., Baptista,C.S.,
Barros,M.H., Bonaccorsi,E.D., Bordin,S., Bove,J.M., Briones,M.R.S.,
Bueno,M.R.P., Camargo,A.A., Camargo,L.E.A., Carraro,D.M.,
Carrer,H., Colauto,N.B., Colombo,C., Costa,F.F., Costa,M.C.R.,
Costa-Neto,C.M., Coutinho,L.L., Cristofani,M., Dias-Neto,E.,
Docena,C., El-Dorry,H., Facincani,A.P., Ferreira,A.J.S.,
Ferreira,V.C.A., Ferro,J.A., Fraga,J.S., Franca,S.C., Franco,M.C.,
Frohme,M., Furlan,L.R., Garnier,M., Goldman,G.H., Goldman,M.H.S.,
Gomes,S.L., Gruber,A., Ho,P.L., Hoheisel,J.D., Junqueira,M.L.,
Kemper,E.L., Kitajima,J.P., Krieger,J.E., Kuramae,E.E., Laigret,F.,
Lambais,M.R., Leite,L.C.C., Lemos,E.G.M., Lemos,M.V.F., Lopes,S.A.,
Lopes,C.R., Machado,J.A., Machado,M.A., Madeira,A.M.B.N.,
Madeira,H.M.F., Marino,C.L., Marques,M.V., Martins,E.A.L.,
Martins,E.M.F., Matsukuma,A.Y., Menck,C.F.M., Miracca,E.C.,
Miyaki,C.Y., Monteiro-Vitorello,C.B., Moon,D.H., Nagai,M.A.,
Nascimento,A.L.T.O., Netto,L.E.S., Nhani,A. Jr., Nobrega,F.G.,
Nunes,L.R., Oliveira,M.A., de Oliveira,M.C., de Oliveira,R.C.,
Palmieri,D.A., Paris,A., Peixoto,B.R., Pereira,G.A.G., Pereira,H.A.
Jr., Pesquero,J.B., Quaggio,R.B., Roberto,P.G., Rodrigues,V., de M.
Rosa,A.J., de Rosa,V.E. Jr., de Sa,R.G., Santelli,R.V.,
Sawasaki,H.E., da Silva,A.C.R., da Silva,F.R., da Silva,A.M.,
Silva,W.A. Jr., da Silveira,J.F., Silvestri,M.L.Z., Siqueira,W.J.,
de Souza,A.A., de Souza,A.P., Terenzi,M.F., Truffi,D., Tsai,S.M.,
Tsuhako,M.H., Vallada,H., Van Sluys,M.A., Verjovski-Almeida,S.,
Vettore,A.L., Zago,M.A., Zatz,M., Meidanis,J. and Setubal,J.C.
TITLE The genome sequence of the plant pathogen Xylella fastidiosa. The
Xylella fastidiosa Consortium of the Organization for Nucleotide
Sequencing and Analysis
JOURNAL Nature 406 (6792), 151-157 (2000)
PUBMED 10910347
REFERENCE 2 (bases 1 to 2679306)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (02-OCT-2001) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2679306)
AUTHORS Simpson,A.J.G., Reinach,F.C., Arruda,P., Abreu,F.A., Acencio,M.,
Alvarenga,R., Alves,L.M.C., Araya,J.E., Baia,G.S., Baptista,C.S.,
Barros,M.H., Bonaccorsi,E.D., Bordin,S., Bove,J.M., Briones,M.R.S.,
Bueno,M.R.P., Camargo,A.A., Camargo,L.E.A., Carraro,D.M.,
Carrer,H., Colauto,N.B., Colombo,C., Costa,F.F., Costa,M.C.R.,
Costa-Neto,C.M., Coutinho,L.L., Cristofani,M., Dias-Neto,E.,
Docena,C., El-Dorry,H., Facincani,A.P., Ferreira,A.J.S.,
Ferreira,V.C.A., Ferro,J.A., Fraga,J.S., Franca,S.C., Franco,M.C.,
Frohme,M., Furlan,L.R., Garnier,M., Goldman,G.H., Goldman,M.H.S.,
Gomes,S.L., Gruber,A., Ho,P.L., Hoheisel,J.D., Junqueira,M.L.,
Kemper,E.L., Kitajima,J.P., Krieger,J.E., Kuramae,E.E., Laigret,F.,
Lambais,M.R., Leite,L.C.C., Lemos,E.G.M., Lemos,M.V.F., Lopes,S.A.,
Lopes,C.R., Machado,J.A., Machado,M.A., Madeira,A.M.B.N.,
Madeira,H.M.F., Marino,C.L., Marques,M.V., Martins,E.A.L.,
Martins,E.M.F., Matsukuma,A.Y., Menck,C.F.M., Miracca,E.C.,
Miyaki,C.Y., Monteiro-Vitorello,C.B., Moon,D.H., Nagai,M.A.,
Nascimento,A.L.T.O., Netto,L.E.S., Nhani,A. Jr., Nobrega,F.G.,
Nunes,L.R., Oliveira,M.A., de Oliveira,M.C., de Oliveira,R.C.,
Palmieri,D.A., Paris,A., Peixoto,B.R., Pereira,G.A.G., Pereira,H.A.
Jr., Pesquero,J.B., Quaggio,R.B., Roberto,P.G., Rodrigues,V., de M.
Rosa,A.J., de Rosa,V.E. Jr., de Sa,R.G., Santelli,R.V.,
Sawasaki,H.E., da Silva,A.C.R., da Silva,F.R., da Silva,A.M.,
Silva,W.A. Jr., da Silveira,J.F., Silvestri,M.L.Z., Siqueira,W.J.,
de Souza,A.A., de Souza,A.P., Terenzi,M.F., Truffi,D., Tsai,S.M.,
Tsuhako,M.H., Vallada,H., Van Sluys,M.A., Verjovski-Almeida,S.,
Vettore,A.L., Zago,M.A., Zatz,M., Meidanis,J. and Setubal,J.C.
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2000) Organization for Nucleotide Sequencing and
Analysis, Bioinformatics Lab - IC/Unicamp, C.P. 6176, Campinas, SP
13083-970, Brazil
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE003849.
On Jan 4, 2005 this sequence version replaced gi:55294525.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

20869 | 20945 | - | 77 | 57014152 | XFt01 | - | 16 Met tRNA
|

62407 | 62483 | + | 77 | 57014152 | XFt02 | - | 11 Arg tRNA
|

66558 | 68102 | + | 1545 | 57014152 | XFr01 | - | 16S ribosomal RNA |

68209 | 68284 | + | 76 | 57014152 | XFt03 | - | 02 Ala tRNA
|

68298 | 68374 | + | 77 | 57014152 | XFt04 | - | 14 Ile tRNA
|

68568 | 71449 | + | 2882 | 57014152 | XFr02 | - | 23S ribosomal RNA |

71586 | 71703 | + | 118 | 57014152 | XFr03 | - | 5S ribosomal RNA |

123996 | 124088 | + | 93 | 57014152 | XFt05 | - | 08 Ser tRNA
|

172274 | 173818 | + | 1545 | 57014152 | XFr04 | - | 16S ribosomal RNA |

173925 | 174000 | + | 76 | 57014152 | XFt06 | - | 02 Ala tRNA
|

174014 | 174090 | + | 77 | 57014152 | XFt07 | - | 14 Ile tRNA
|

174284 | 177165 | + | 2882 | 57014152 | XFr05 | - | 23S ribosomal RNA |

177302 | 177419 | + | 118 | 57014152 | XFr06 | - | 5S ribosomal RNA |

224438 | 224513 | - | 76 | 57014152 | XFt08 | - | 02 Ala tRNA
|

236040 | 236114 | - | 75 | 57014152 | XFt09 | - | 04 Glu tRNA
|

242842 | 242918 | + | 77 | 57014152 | XFt10 | - | 16 Met tRNA
|

308643 | 308718 | + | 76 | 57014152 | XFt11 | - | 17 Phe tRNA
|

319058 | 319142 | + | 85 | 57014152 | XFt12 | - | 15 Leu tRNA
|

405760 | 405834 | - | 75 | 57014152 | XFt13 | - | 05 Gln tRNA
|

405880 | 405956 | - | 77 | 57014152 | XFt14 | - | 16 Met tRNA
|

486925 | 487001 | + | 77 | 57014152 | XFt15 | - | 07 Asn tRNA
|

615886 | 615973 | - | 88 | 57014152 | XFt16 | - | 08 Ser tRNA
|

649104 | 649178 | + | 75 | 57014152 | XFt17 | - | 13 Val tRNA
|

699322 | 699398 | + | 77 | 57014152 | XFt18 | - | 03 Pro tRNA
|

732074 | 732147 | - | 74 | 57014152 | XFt19 | - | 01 Gly tRNA
|

816524 | 816600 | - | 77 | 57014152 | XFt20 | - | 03 Pro tRNA
|

926649 | 926723 | + | 75 | 57014152 | XFt21 | - | 13 Val tRNA
|

1017853 | 1017939 | - | 87 | 57014152 | XFt22 | - | 15 Leu tRNA
|

1018069 | 1018144 | - | 76 | 57014152 | XFt23 | - | 04 Glu tRNA
|

1018198 | 1018273 | - | 76 | 57014152 | XFt24 | - | 02 Ala tRNA
|

1078829 | 1078913 | - | 85 | 57014152 | XFt25 | - | 15 Leu tRNA
|

1131233 | 1131319 | - | 87 | 57014152 | XFt26 | - | 15 Leu tRNA
|

1135741 | 1135824 | - | 84 | 57014152 | XFt27 | - | 15 Leu tRNA
|

1142842 | 1142916 | + | 75 | 57014152 | XFt28 | - | 13 Val tRNA
|

1142947 | 1143023 | + | 77 | 57014152 | XFt29 | - | 06 Asp tRNA
|

1191242 | 1191317 | - | 76 | 57014152 | XFt30 | - | 10 Lys tRNA
|

1631333 | 1631409 | + | 77 | 57014152 | XFt31 | - | 11 Arg tRNA
|

1638644 | 1638719 | + | 76 | 57014152 | XFt32 | - | 01 Gly tRNA
|

1707512 | 1707587 | - | 76 | 57014152 | XFt33 | - | 12 Thr tRNA
|

1720231 | 1720323 | - | 93 | 57014152 | XFt34 | - | 08 Ser tRNA
|

1776435 | 1776510 | + | 76 | 57014152 | XFt35 | - | 10 Lys tRNA
|

2004768 | 2004841 | + | 74 | 57014152 | XFt36 | - | 19 Cys tRNA
|

2047010 | 2047100 | - | 91 | 57014152 | XFt37 | - | 08 Ser tRNA
|

2193930 | 2194005 | - | 76 | 57014152 | XFt38 | - | 01 Gly tRNA
|

2295154 | 2295229 | - | 76 | 57014152 | XFt39 | - | 12 Thr tRNA
|

2459885 | 2459962 | + | 78 | 57014152 | XFt40 | - | 11 Arg tRNA
|

2524115 | 2524190 | - | 76 | 57014152 | XFt41 | - | 20 Trp tRNA
|

2525541 | 2525616 | - | 76 | 57014152 | XFt42 | - | 12 Thr tRNA
|

2525659 | 2525732 | - | 74 | 57014152 | XFt43 | - | 01 Gly tRNA
|

2525766 | 2525851 | - | 86 | 57014152 | XFt44 | - | 18 Tyr tRNA
|

2529603 | 2529679 | - | 77 | 57014152 | XFt45 | - | 05 Gln tRNA
|

2602997 | 2603351 | + | 355 | 57014152 | XFs01 | - | tmRNA |

2652606 | 2652682 | + | 77 | 57014152 | XFt46 | - | 03 Pro tRNA
|

2652744 | 2652822 | + | 79 | 57014152 | XFt47 | - | 11 Arg tRNA
|

2652862 | 2652938 | + | 77 | 57014152 | XFt48 | - | 09 His tRNA
|

2653049 | 2653124 | + | 76 | 57014152 | XFt49 | - | 10 Lys tRNA
|