Материалы:NC 004431

```
LOCUS NC_004431 5231428 bp DNA circular BCT 04-APR-2006
DEFINITION Escherichia coli CFT073, complete genome.
ACCESSION NC_004431
VERSION NC_004431.1 GI:26245917
KEYWORDS .
SOURCE Escherichia coli CFT073
ORGANISM Escherichia coli CFT073
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Escherichia.
REFERENCE 1 (bases 1 to 5231428)
AUTHORS Welch,R.A., Burland,V., Plunkett,G.D. III, Redford,P., Roesch,P.,
Rasko,D.A., Buckles,E.L., Liou,S.-R., Boutin,A., Hackett,J.,
Stroud,D., Mayhew,G.F., Rose,D.J., Zhou,S., Schwartz,D.C.,
Perna,N.T., Mobley,H.L.T., Donnenberg,M.S. and Blattner,F.R.
TITLE Extensive mosaic structure revealed by the complete genome sequence
of uropathogenic Escherichia coli
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 17020-17024 (2002)
PUBMED 12471157
REFERENCE 2 (bases 1 to 5231428)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5231428)
AUTHORS Welch,R.A., Burland,V., Plunkett,G.D. III, Redford,P., Roesch,P.,
Rasko,D.A., Buckles,E.L., Liou,S.-R., Boutin,A., Hackett,J.,
Stroud,D., Mayhew,G.F., Rose,D.J., Zhou,S., Schwartz,D.C.,
Perna,N.T., Mobley,H.L.T., Donnenberg,M.S. and Blattner,F.R.
TITLE Direct Submission
JOURNAL Submitted (20-JUN-2002) Genetics Laboratory, University of
Wisconsin - Madison, 445 Henry Mall, Madison, WI 53706, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE014075.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

235186 | 236727 | + | 1542 | 26245917 | c5600 | - | 16S ribosomal RNA |

236813 | 236889 | + | 77 | 26245917 | c5511 | - | 04 Glu tRNA
|

236902 | 236976 | + | 75 | 26245917 | c5512 | - | 02 Ala tRNA
|

237160 | 240063 | + | 2904 | 26245917 | c5601 | - | 23S ribosomal RNA |

240157 | 240276 | + | 120 | 26245917 | c5602 | - | 5S ribosomal RNA |

240329 | 240405 | + | 77 | 26245917 | c5513 | - | 06 Asp tRNA
|

248554 | 248630 | + | 77 | 26245917 | c5514 | - | 06 Asp tRNA
|

271999 | 272136 | + | 138 | 26245917 | c5503 | - | 4.5S RNA |

370224 | 370299 | + | 76 | 26245917 | c5515 | - | 12 Thr tRNA
|

434982 | 435062 | + | 81 | 26245917 | c5516 | - | Xaa tRNA |

627071 | 627147 | + | 77 | 26245917 | c5517 | - | 11 Arg tRNA
|

729302 | 729376 | - | 75 | 26245917 | c5518 | - | 05 Gln tRNA
|

729414 | 729488 | - | 75 | 26245917 | c5519 | - | 05 Gln tRNA
|

729537 | 729613 | - | 77 | 26245917 | c5520 | - | 16 Met tRNA
|

729629 | 729703 | - | 75 | 26245917 | c5521 | - | 05 Gln tRNA
|

729738 | 729812 | - | 75 | 26245917 | c5522 | - | 05 Gln tRNA
|

729836 | 729920 | - | 85 | 26245917 | c5523 | - | 15 Leu tRNA
|

729931 | 730007 | - | 77 | 26245917 | c5524 | - | 16 Met tRNA
|

803225 | 803300 | + | 76 | 26245917 | c5525 | - | 10 Lys tRNA
|

803336 | 803411 | + | 76 | 26245917 | c5526 | - | 13 Val tRNA
|

803414 | 803489 | + | 76 | 26245917 | c5527 | - | 10 Lys tRNA
|

803541 | 803616 | + | 76 | 26245917 | c5528 | - | 13 Val tRNA
|

803620 | 803695 | + | 76 | 26245917 | c5529 | - | 10 Lys tRNA
|

803744 | 803819 | + | 76 | 26245917 | c5530 | - | 10 Lys tRNA
|

803853 | 803928 | + | 76 | 26245917 | c5531 | - | 10 Lys tRNA
|

980013 | 980100 | - | 88 | 26245917 | c5532 | - | 08 Ser tRNA
|

1051024 | 1051076 | - | 53 | 26245917 | c5504 | - | DicF antisense RNA |

1075414 | 1075501 | - | 88 | 26245917 | c5533 | - | 08 Ser tRNA
|

1211152 | 1211228 | + | 77 | 26245917 | c5534 | - | 11 Arg tRNA
|

1241062 | 1241149 | - | 88 | 26245917 | c5535 | - | 08 Ser tRNA
|

1342304 | 1342379 | + | 76 | 26245917 | c5536 | - | 16 Met tRNA
|

1342387 | 1342463 | + | 77 | 26245917 | c5537 | - | 11 Arg tRNA
|

1342477 | 1342553 | + | 77 | 26245917 | c5538 | - | 11 Arg tRNA
|

1532391 | 1532475 | - | 85 | 26245917 | c5539 | - | 18 Tyr tRNA
|

1532509 | 1532593 | - | 85 | 26245917 | c5540 | - | 18 Tyr tRNA
|

1895941 | 1896025 | - | 85 | 26245917 | c5505 | - | anti-sense RNA silencer of rcsA gene |

1902573 | 1902649 | + | 77 | 26245917 | c5541 | - | 13 Val tRNA
|

1902654 | 1902730 | + | 77 | 26245917 | c5542 | - | 13 Val tRNA
|

2140492 | 2140578 | - | 87 | 26245917 | c5543 | - | 15 Leu tRNA
|

2140591 | 2140664 | - | 74 | 26245917 | c5544 | - | 19 Cys tRNA
|

2140718 | 2140793 | - | 76 | 26245917 | c5545 | - | 01 Gly tRNA
|

2216841 | 2216930 | - | 90 | 26245917 | c5546 | - | 08 Ser tRNA
|

2217922 | 2217997 | + | 76 | 26245917 | c5547 | - | 07 Asn tRNA
|

2258516 | 2258591 | - | 76 | 26245917 | c5548 | - | 07 Asn tRNA
|

2260925 | 2261000 | - | 76 | 26245917 | c5549 | - | 07 Asn tRNA
|

2262749 | 2262824 | + | 76 | 26245917 | c5550 | - | 07 Asn tRNA
|

2576748 | 2576824 | + | 77 | 26245917 | c5551 | - | 03 Pro tRNA
|

2746725 | 2746799 | + | 75 | 26245917 | c5552 | - | 11 Arg tRNA
|

2799076 | 2799151 | - | 76 | 26245917 | c5553 | - | 02 Ala tRNA
|

2799191 | 2799266 | - | 76 | 26245917 | c5554 | - | 02 Ala tRNA
|

2801965 | 2802040 | + | 76 | 26245917 | c5555 | - | 13 Val tRNA
|

2802084 | 2802159 | + | 76 | 26245917 | c5556 | - | 13 Val tRNA
|

2802206 | 2802281 | + | 76 | 26245917 | c5557 | - | 13 Val tRNA
|

2802286 | 2802361 | + | 76 | 26245917 | c5558 | - | 10 Lys tRNA
|

2988760 | 2988879 | - | 120 | 26245917 | c5615 | - | 5S ribosomal RNA |

2988973 | 2991877 | - | 2905 | 26245917 | c5616 | - | 23S ribosomal RNA |

2992062 | 2992137 | - | 76 | 26245917 | c5559 | - | 04 Glu tRNA
|

2992309 | 2993859 | - | 1551 | 26245917 | c5617 | - | 16S ribosomal RNA |

3070879 | 3071061 | + | 183 | 26245917 | c5508 | - | 6S RNA |

3100380 | 3100456 | - | 77 | 26245917 | c5560 | - | 11 Arg tRNA
|

3100520 | 3100596 | - | 77 | 26245917 | c5561 | - | 11 Arg tRNA
|

3100659 | 3100735 | - | 77 | 26245917 | c5562 | - | 11 Arg tRNA
|

3100798 | 3100874 | - | 77 | 26245917 | c5563 | - | 11 Arg tRNA
|

3100939 | 3101015 | - | 77 | 26245917 | c5564 | - | 11 Arg tRNA
|

3101019 | 3101111 | - | 93 | 26245917 | c5565 | - | 08 Ser tRNA
|

3222091 | 3222167 | + | 77 | 26245917 | c5566 | - | 16 Met tRNA
|

3222201 | 3222277 | + | 77 | 26245917 | c5567 | - | 16 Met tRNA
|

3222311 | 3222387 | + | 77 | 26245917 | c5568 | - | 16 Met tRNA
|

3295426 | 3295499 | - | 74 | 26245917 | c5569 | - | 01 Gly tRNA
|

3406225 | 3406300 | + | 76 | 26245917 | c5570 | - | 17 Phe tRNA
|

3426479 | 3426855 | - | 377 | 26245917 | c5509 | - | RNase P, RNA component |

3656193 | 3656268 | + | 76 | 26245917 | c5571 | - | 16 Met tRNA Неверная идентификация
|

3751846 | 3751922 | - | 77 | 26245917 | c5572 | - | 16 Met tRNA
|

3755703 | 3755789 | - | 87 | 26245917 | c5573 | - | 15 Leu tRNA
|

3855028 | 3855140 | - | 113 | 26245917 | c5618 | - | 5S ribosomal RNA |

3855236 | 3858140 | - | 2905 | 26245917 | c5619 | - | 23S ribosomal RNA |

3858429 | 3858504 | - | 76 | 26245917 | c5574 | - | 04 Glu tRNA
|

3858590 | 3860131 | - | 1542 | 26245917 | c5620 | - | 16S ribosomal RNA |

4147653 | 4147729 | - | 77 | 26245917 | c5575 | - | 03 Pro tRNA
|

4274308 | 4274398 | + | 91 | 26245917 | c5576 | - | Sec tRNA |

4294331 | 4294439 | + | 109 | 26245917 | c5510 | - | spot 42 RNA |

4442840 | 4444382 | + | 1543 | 26245917 | c5603 | - | 16S ribosomal RNA |

4444468 | 4444543 | + | 76 | 26245917 | c5577 | - | 04 Glu tRNA
|

4444737 | 4447644 | + | 2908 | 26245917 | c5604 | - | 23S ribosomal RNA |

4447738 | 4447857 | + | 120 | 26245917 | c5605 | - | 5S ribosomal RNA |

4447909 | 4447985 | + | 77 | 26245917 | c5578 | - | 06 Asp tRNA
|

4447994 | 4448069 | + | 76 | 26245917 | c5579 | - | 20 Trp tRNA
|

4482539 | 4482615 | + | 77 | 26245917 | c5580 | - | 11 Arg tRNA
|

4482673 | 4482749 | + | 77 | 26245917 | c5581 | - | 09 His tRNA
|

4482770 | 4482856 | + | 87 | 26245917 | c5582 | - | 15 Leu tRNA
|

4482899 | 4482975 | + | 77 | 26245917 | c5583 | - | 03 Pro tRNA
|

4561194 | 4562736 | + | 1543 | 26245917 | c5606 | - | 16S ribosomal RNA |

4562805 | 4562881 | + | 77 | 26245917 | c5584 | - | 14 Ile tRNA
|

4562924 | 4562999 | + | 76 | 26245917 | c5585 | - | 02 Ala tRNA
|

4563174 | 4566081 | + | 2908 | 26245917 | c5607 | - | 23S ribosomal RNA |

4566175 | 4566294 | + | 120 | 26245917 | c5608 | - | 5S ribosomal RNA |

4699063 | 4700613 | + | 1551 | 26245917 | c5609 | - | 16S ribosomal RNA |

4700785 | 4700860 | + | 76 | 26245917 | c5586 | - | 04 Glu tRNA
|

4701054 | 4703957 | + | 2904 | 26245917 | c5610 | - | 23S ribosomal RNA |

4704051 | 4704170 | + | 120 | 26245917 | c5611 | - | 5S ribosomal RNA |

4707636 | 4707711 | + | 76 | 26245917 | c5587 | - | 12 Thr tRNA
|

4707720 | 4707804 | + | 85 | 26245917 | c5588 | - | 18 Tyr tRNA
|

4707921 | 4707995 | + | 75 | 26245917 | c5589 | - | 01 Gly tRNA
|

4708002 | 4708077 | + | 76 | 26245917 | c5590 | - | 12 Thr tRNA
|

4739329 | 4740870 | + | 1542 | 26245917 | c5612 | - | 16S ribosomal RNA |

4740956 | 4741031 | + | 76 | 26245917 | c5591 | - | 04 Glu tRNA
|

4741226 | 4744132 | + | 2907 | 26245917 | c5613 | - | 23S ribosomal RNA |

4744226 | 4744345 | + | 120 | 26245917 | c5614 | - | 5S ribosomal RNA |

4971585 | 4971660 | - | 76 | 26245917 | c5592 | - | 17 Phe tRNA
|

5000526 | 5000601 | + | 76 | 26245917 | c5593 | - | 01 Gly tRNA
|

5000638 | 5000713 | + | 76 | 26245917 | c5594 | - | 01 Gly tRNA
|

5000749 | 5000824 | + | 76 | 26245917 | c5595 | - | 01 Gly tRNA
|

5115342 | 5115426 | + | 85 | 26245917 | c5596 | - | 15 Leu tRNA
|

5195068 | 5195154 | - | 87 | 26245917 | c5597 | - | 15 Leu tRNA
|

5195189 | 5195275 | - | 87 | 26245917 | c5598 | - | 15 Leu tRNA
|

5195304 | 5195390 | - | 87 | 26245917 | c5599 | - | 15 Leu tRNA
|