Материалы:NC 007946

```
LOCUS NC_007946 5065741 bp DNA circular BCT 12-MAR-2007
DEFINITION Escherichia coli UTI89, complete genome.
ACCESSION NC_007946
VERSION NC_007946.1 GI:91209055
KEYWORDS .
SOURCE Escherichia coli UTI89
ORGANISM Escherichia coli UTI89
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Escherichia.
REFERENCE 1 (bases 1 to 5065741)
AUTHORS Chen,S.L., Hung,C.S., Xu,J., Reigstad,C.S., Magrini,V., Sabo,A.,
Blasiar,D., Bieri,T., Meyer,R.R., Ozersky,P., Armstrong,J.R.,
Fulton,R.S., Latreille,J.P., Spieth,J., Hooton,T.M., Mardis,E.R.,
Hultgren,S.J. and Gordon,J.I.
TITLE Identification of genes subject to positive selection in
uropathogenic strains of Escherichia coli: A comparative genomics
approach
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5977-5982 (2006)
PUBMED 16585510
REFERENCE 2 (bases 1 to 5065741)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (07-APR-2006) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5065741)
AUTHORS Chen,S.L., Hung,C.-S., Xu,J., Reigstad,C.S., Magrini,V., Sabo,A.,
Blasiar,D., Bieri,T., Meyer,R.R., Ozersky,P., Armstrong,J.R.,
Fulton,R.S., Latreille,J.P., Spieth,J., Hooton,T.M., Mardis,E.R.,
Hultgren,S.J. and Gordon,J.I.
TITLE Direct Submission
JOURNAL Submitted (05-JAN-2006) Molecular Microbiology, Genetics, and
Molecular Biology and Pharmacology, Washington University School of
Medicine, 660 South Euclid Avenue, Saint Louis, MO 63110, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000243.
Bacteria is available by contacting Scott Hultgren
(hultgren@borcim.wustl.edu).
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

228524 | 230065 | + | 1542 | 91209055 | UTI89_C0217 | - | 16S ribosomal RNA |

230134 | 230207 | + | 74 | 91209055 | UTI89_C0219 | - | 14 Ile tRNA
|

230253 | 230325 | + | 73 | 91209055 | UTI89_C0220 | - | 02 Ala tRNA
|

230503 | 233406 | + | 2904 | 91209055 | UTI89_C0221 | - | 23S ribosomal RNA |

233505 | 233624 | + | 120 | 91209055 | UTI89_C0224 | - | 5S ribosomal RNA |

233676 | 233749 | + | 74 | 91209055 | UTI89_C0225 | - | 06 Asp tRNA
|

241899 | 241972 | + | 74 | 91209055 | UTI89_C0235 | - | 06 Asp tRNA
|

295065 | 295137 | + | 73 | 91209055 | UTI89_C0285 | - | 12 Thr tRNA
|

305699 | 305771 | + | 73 | 91209055 | UTI89_C0294 | - | 12 Thr tRNA
|

569030 | 569103 | + | 74 | 91209055 | UTI89_C0561 | - | 11 Arg tRNA
|

671218 | 671289 | - | 72 | 91209055 | UTI89_C0661 | - | 05 Gln tRNA
|

671330 | 671401 | - | 72 | 91209055 | UTI89_C0662 | - | 05 Gln tRNA
|

671453 | 671526 | - | 74 | 91209055 | UTI89_C0663 | - | 16 Met tRNA
|

671545 | 671616 | - | 72 | 91209055 | UTI89_C0664 | - | 05 Gln tRNA
|

671654 | 671725 | - | 72 | 91209055 | UTI89_C0665 | - | 05 Gln tRNA
|

671752 | 671833 | - | 82 | 91209055 | UTI89_C0666 | - | 15 Leu tRNA
|

671847 | 671920 | - | 74 | 91209055 | UTI89_C0667 | - | 16 Met tRNA
|

744282 | 744354 | + | 73 | 91209055 | UTI89_C0740 | - | 10 Lys tRNA
|

744393 | 744465 | + | 73 | 91209055 | UTI89_C0741 | - | 13 Val tRNA
|

744471 | 744543 | + | 73 | 91209055 | UTI89_C0742 | - | 10 Lys tRNA
|

744598 | 744670 | + | 73 | 91209055 | UTI89_C0743 | - | 13 Val tRNA
|

744677 | 744749 | + | 73 | 91209055 | UTI89_C0744 | - | 10 Lys tRNA
|

744801 | 744873 | + | 73 | 91209055 | UTI89_C0745 | - | 10 Lys tRNA
|

744910 | 744982 | + | 73 | 91209055 | UTI89_C0746 | - | 10 Lys tRNA
|

895679 | 895763 | - | 85 | 91209055 | UTI89_C0897 | - | 08 Ser tRNA
|

1028950 | 1029034 | - | 85 | 91209055 | UTI89_C1039 | - | 08 Ser tRNA
|

1120468 | 1120541 | + | 74 | 91209055 | UTI89_C1126 | - | 11 Arg tRNA
|

1142535 | 1142619 | - | 85 | 91209055 | UTI89_C1153 | - | 08 Ser tRNA
|

1362337 | 1362418 | - | 82 | 91209055 | UTI89_C1426 | - | 18 Tyr tRNA
|

1362455 | 1362536 | - | 82 | 91209055 | UTI89_C1427 | - | 18 Tyr tRNA
|

1404628 | 1404700 | + | 73 | 91209055 | UTI89_C1482 | - | 14 Ile tRNA
|

1404801 | 1404874 | + | 74 | 91209055 | UTI89_C1483 | - | 11 Arg tRNA
|

1782194 | 1782267 | + | 74 | 91209055 | UTI89_C1856 | - | 13 Val tRNA
|

1782275 | 1782348 | + | 74 | 91209055 | UTI89_C1857 | - | 13 Val tRNA
|

2015566 | 2015649 | - | 84 | 91209055 | UTI89_C2110 | - | 15 Leu tRNA
|

2015665 | 2015735 | - | 71 | 91209055 | UTI89_C2111 | - | 19 Cys tRNA
|

2015792 | 2015864 | - | 73 | 91209055 | UTI89_C2112 | - | 01 Gly tRNA
|

2068722 | 2068808 | - | 87 | 91209055 | UTI89_C2174 | - | 08 Ser tRNA
|

2069800 | 2069872 | + | 73 | 91209055 | UTI89_C2176 | - | 07 Asn tRNA
|

2109697 | 2109769 | - | 73 | 91209055 | UTI89_C2198 | - | 07 Asn tRNA
|

2111515 | 2111587 | + | 73 | 91209055 | UTI89_C2200 | - | 07 Asn tRNA
|

2113924 | 2113996 | + | 73 | 91209055 | UTI89_C2203 | - | 07 Asn tRNA
|

2426261 | 2426334 | + | 74 | 91209055 | UTI89_C2467 | - | 03 Pro tRNA
|

2597297 | 2597368 | + | 72 | 91209055 | UTI89_C2633 | - | 11 Arg tRNA
|

2677965 | 2678037 | - | 73 | 91209055 | UTI89_C2727 | - | 02 Ala tRNA
|

2678080 | 2678152 | - | 73 | 91209055 | UTI89_C2728 | - | 02 Ala tRNA
|

2680851 | 2680923 | + | 73 | 91209055 | UTI89_C2732 | - | 13 Val tRNA
|

2680971 | 2681043 | + | 73 | 91209055 | UTI89_C2733 | - | 13 Val tRNA
|

2681093 | 2681165 | + | 73 | 91209055 | UTI89_C2734 | - | 13 Val tRNA
|

2681173 | 2681245 | + | 73 | 91209055 | UTI89_C2735 | - | 10 Lys tRNA
|

2870341 | 2870460 | - | 120 | 91209055 | UTI89_C2917 | - | 5S ribosomal RNA |

2870559 | 2873462 | - | 2904 | 91209055 | UTI89_C2918 | - | 23S ribosomal RNA |

2873659 | 2873731 | - | 73 | 91209055 | UTI89_C2921 | - | 04 Glu tRNA
|

2873817 | 2875358 | - | 1542 | 91209055 | UTI89_C2922 | - | 16S ribosomal RNA |

2976587 | 2976660 | - | 74 | 91209055 | UTI89_C3053 | - | 11 Arg tRNA
|

2976727 | 2976800 | - | 74 | 91209055 | UTI89_C3054 | - | 11 Arg tRNA
|

2976868 | 2976941 | - | 74 | 91209055 | UTI89_C3055 | - | 11 Arg tRNA
|

2976948 | 2977037 | - | 90 | 91209055 | UTI89_C3056 | - | 08 Ser tRNA
|

3101730 | 3101803 | + | 74 | 91209055 | UTI89_C3187 | - | 16 Met tRNA
|

3101840 | 3101913 | + | 74 | 91209055 | UTI89_C3188 | - | 16 Met tRNA
|

3101950 | 3102023 | + | 74 | 91209055 | UTI89_C3189 | - | 16 Met tRNA
|

3177834 | 3177904 | - | 71 | 91209055 | UTI89_C3249 | - | 01 Gly tRNA
|

3287922 | 3287994 | + | 73 | 91209055 | UTI89_C3359 | - | 17 Phe tRNA
|

3443408 | 3443480 | + | 73 | 91209055 | UTI89_C3507 | - | 14 Ile tRNA
|

3538051 | 3538124 | - | 74 | 91209055 | UTI89_C3603 | - | 16 Met tRNA
|

3541905 | 3541988 | - | 84 | 91209055 | UTI89_C3606 | - | 15 Leu tRNA
|

3641214 | 3641333 | - | 120 | 91209055 | UTI89_C3714 | - | 5S ribosomal RNA |

3641374 | 3641446 | - | 73 | 91209055 | UTI89_C3715 | - | 12 Thr tRNA
|

3641459 | 3641578 | - | 120 | 91209055 | UTI89_C3716 | - | 5S ribosomal RNA |

3641673 | 3644576 | - | 2904 | 91209055 | UTI89_C3717 | - | 23S ribosomal RNA |

3644763 | 3644835 | - | 73 | 91209055 | UTI89_C3720 | - | 02 Ala tRNA
|

3644881 | 3644954 | - | 74 | 91209055 | UTI89_C3721 | - | 14 Ile tRNA
|

3645023 | 3646564 | - | 1542 | 91209055 | UTI89_C3722 | - | 16S ribosomal RNA |

3689284 | 3689356 | - | 73 | 91209055 | UTI89_C3796 | - | 12 Thr tRNA
|

3689366 | 3689437 | - | 72 | 91209055 | UTI89_C3797 | - | 01 Gly tRNA
|

3689557 | 3689638 | - | 82 | 91209055 | UTI89_C3798 | - | 18 Tyr tRNA
|

3689650 | 3689722 | - | 73 | 91209055 | UTI89_C3799 | - | 12 Thr tRNA
|

3693188 | 3693307 | - | 120 | 91209055 | UTI89_C3806 | - | 5S ribosomal RNA |

3693402 | 3696305 | - | 2904 | 91209055 | UTI89_C3807 | - | 23S ribosomal RNA |

3696502 | 3696574 | - | 73 | 91209055 | UTI89_C3810 | - | 04 Glu tRNA
|

3696660 | 3698201 | - | 1542 | 91209055 | UTI89_C3811 | - | 16S ribosomal RNA |

3975878 | 3975951 | - | 74 | 91209055 | UTI89_C4085 | - | 03 Pro tRNA
|

4101848 | 4101938 | + | 91 | 91209055 | UTI89_C4211 | - | Sec tRNA |

4202676 | 4204217 | + | 1542 | 91209055 | UTI89_C4311 | - | 16S ribosomal RNA |

4204303 | 4204375 | + | 73 | 91209055 | UTI89_C4313 | - | 04 Glu tRNA
|

4204572 | 4207475 | + | 2904 | 91209055 | UTI89_C4314 | - | 23S ribosomal RNA |

4207569 | 4207688 | + | 120 | 91209055 | UTI89_C4317 | - | 5S ribosomal RNA |

4207740 | 4207813 | + | 74 | 91209055 | UTI89_C4318 | - | 06 Asp tRNA
|

4207825 | 4207897 | + | 73 | 91209055 | UTI89_C4319 | - | 20 Trp tRNA
|

4242369 | 4242442 | + | 74 | 91209055 | UTI89_C4354 | - | 11 Arg tRNA
|

4242504 | 4242576 | + | 73 | 91209055 | UTI89_C4355 | - | 09 His tRNA
|

4242600 | 4242683 | + | 84 | 91209055 | UTI89_C4356 | - | 15 Leu tRNA
|

4242729 | 4242802 | + | 74 | 91209055 | UTI89_C4357 | - | 03 Pro tRNA
|

4321858 | 4323399 | + | 1542 | 91209055 | UTI89_C4436 | - | 16S ribosomal RNA |

4323468 | 4323541 | + | 74 | 91209055 | UTI89_C4438 | - | 14 Ile tRNA
|

4323587 | 4323659 | + | 73 | 91209055 | UTI89_C4439 | - | 02 Ala tRNA
|

4323846 | 4326749 | + | 2904 | 91209055 | UTI89_C4440 | - | 23S ribosomal RNA |

4326843 | 4326962 | + | 120 | 91209055 | UTI89_C4442 | - | 5S ribosomal RNA |

4456367 | 4457908 | + | 1542 | 91209055 | UTI89_C4563 | - | 16S ribosomal RNA |

4457994 | 4458066 | + | 73 | 91209055 | UTI89_C4565 | - | 04 Glu tRNA
|

4458263 | 4461166 | + | 2904 | 91209055 | UTI89_C4566 | - | 23S ribosomal RNA |

4461265 | 4461384 | + | 120 | 91209055 | UTI89_C4569 | - | 5S ribosomal RNA |

4634666 | 4634738 | - | 73 | 91209055 | UTI89_C4731 | - | 17 Phe tRNA
|

4664172 | 4664244 | + | 73 | 91209055 | UTI89_C4763 | - | 01 Gly tRNA
|

4664284 | 4664356 | + | 73 | 91209055 | UTI89_C4764 | - | 01 Gly tRNA
|

4664395 | 4664467 | + | 73 | 91209055 | UTI89_C4765 | - | 01 Gly tRNA
|

4778112 | 4778193 | + | 82 | 91209055 | UTI89_C4877 | - | 15 Leu tRNA
|

4983852 | 4983935 | - | 84 | 91209055 | UTI89_C5075 | - | 15 Leu tRNA
|

4983973 | 4984056 | - | 84 | 91209055 | UTI89_C5076 | - | 15 Leu tRNA
|

4984088 | 4984171 | - | 84 | 91209055 | UTI89_C5077 | - | 15 Leu tRNA
|