Материалы:NC 008536

LOCUS NC_008536 9965640 bp DNA circular BCT 24-OCT-2006 DEFINITION Solibacter usitatus Ellin6076, complete genome. ACCESSION NC_008536 VERSION NC_008536.1 GI:116619145 KEYWORDS . SOURCE Solibacter usitatus Ellin6076 ORGANISM Solibacter usitatus Ellin6076 Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Solibacter. REFERENCE 1 (bases 1 to 9965640) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Thompson,L.S., Brettin,T., Bruce,D., Han,C., Tapia,R., Gilna,P., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Janssen,P.H., Kuske,C.R. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Solibacter usitatus Ellin6076 JOURNAL Unpublished REFERENCE 2 (bases 1 to 9965640) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-OCT-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 9965640) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Thompson,L.S., Brettin,T., Bruce,D., Han,C., Tapia,R., Gilna,P., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Janssen,P.H., Kuske,C.R. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (06-OCT-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000473. URL -- http://www.jgi.doe.gov JGI Project ID: 3634513 Source DNA and bacteria available from Cheryl R. Kuske (kuske@lanl.gov) Contacts: Cheryl R. Kuske (kuske@lanl.gov) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

19687 | 19763 | - | 77 | 116619145 | Acid_R0001 | - | 11 Arg tRNA
|

182141 | 182218 | + | 78 | 116619145 | Acid_R0002 | - | 03 Pro tRNA
|

327532 | 327608 | - | 77 | 116619145 | Acid_R0003 | - | 16 Met tRNA
|

348949 | 349025 | - | 77 | 116619145 | Acid_R0004 | - | 16 Met tRNA
|

630260 | 630334 | - | 75 | 116619145 | Acid_R0005 | - | 01 Gly tRNA
|

709547 | 709622 | - | 76 | 116619145 | Acid_R0006 | - | 16 Met tRNA
|

746084 | 746160 | + | 77 | 116619145 | Acid_R0007 | - | 13 Val tRNA
|

882526 | 882600 | - | 75 | 116619145 | Acid_R0008 | - | 07 Asn tRNA
|

1209504 | 1209577 | + | 74 | 116619145 | Acid_R0009 | - | 05 Gln tRNA
|

1248105 | 1249598 | + | 1494 | 116619145 | Acid_R0010 | - | 16S ribosomal RNA |

1249865 | 1249940 | + | 76 | 116619145 | Acid_R0011 | - | 02 Ala tRNA
|

1249955 | 1250031 | + | 77 | 116619145 | Acid_R0012 | - | 14 Ile tRNA
|

1250233 | 1253163 | + | 2931 | 116619145 | Acid_R0013 | - | 23S ribosomal RNA |

1253304 | 1253420 | + | 117 | 116619145 | Acid_R0014 | - | 5S ribosomal RNA |

1431141 | 1431217 | - | 77 | 116619145 | Acid_R0015 | - | 16 Met tRNA
|

1688343 | 1688431 | - | 89 | 116619145 | Acid_R0016 | - | 15 Leu tRNA
|

1691811 | 1691886 | + | 76 | 116619145 | Acid_R0017 | - | 10 Lys tRNA
|

1811009 | 1811085 | + | 77 | 116619145 | Acid_R0018 | - | 11 Arg tRNA
|

1969439 | 1970932 | + | 1494 | 116619145 | Acid_R0019 | - | 16S ribosomal RNA |

1971197 | 1971272 | + | 76 | 116619145 | Acid_R0020 | - | 02 Ala tRNA
|

1971305 | 1971381 | + | 77 | 116619145 | Acid_R0021 | - | 14 Ile tRNA
|

1971626 | 1974556 | + | 2931 | 116619145 | Acid_R0022 | - | 23S ribosomal RNA |

1974694 | 1974810 | + | 117 | 116619145 | Acid_R0023 | - | 5S ribosomal RNA |

1983234 | 1983310 | + | 77 | 116619145 | Acid_R0024 | - | 03 Pro tRNA
|

2068389 | 2068480 | + | 92 | 116619145 | Acid_R0025 | - | 08 Ser tRNA
|

2200500 | 2200574 | + | 75 | 116619145 | Acid_R0026 | - | 19 Cys tRNA
|

2389808 | 2389884 | + | 77 | 116619145 | Acid_R0027 | - | 11 Arg tRNA
|

2703580 | 2703654 | - | 75 | 116619145 | Acid_R0028 | - | 04 Glu tRNA
|

2995019 | 2995095 | - | 77 | 116619145 | Acid_R0029 | - | 13 Val tRNA
|

3409567 | 3409656 | - | 90 | 116619145 | Acid_R0030 | - | 08 Ser tRNA
|

3488758 | 3488833 | + | 76 | 116619145 | Acid_R0031 | - | 10 Lys tRNA
|

3585610 | 3585685 | + | 76 | 116619145 | Acid_R0032 | - | 02 Ala tRNA
|

3673987 | 3674061 | + | 75 | 116619145 | Acid_R0033 | - | 01 Gly tRNA
|

4008774 | 4008874 | - | 101 | 116619145 | Acid_R0034 | - | SRP RNA; RNA component of signal recognition particle |

4117336 | 4117425 | + | 90 | 116619145 | Acid_R0035 | - | Sec tRNA |

4360710 | 4360781 | + | 72 | 116619145 | Acid_R0036 | - | 16 Met tRNA
|

4664464 | 4664540 | - | 77 | 116619145 | Acid_R0037 | - | 03 Pro tRNA
|

4706493 | 4706566 | - | 74 | 116619145 | Acid_R0038 | - | 05 Gln tRNA
|

4999957 | 5000033 | - | 77 | 116619145 | Acid_R0039 | - | 09 His tRNA
|

5195913 | 5196108 | + | 196 | 116619145 | Acid_R0040 | - | RNA component of RNaseP |

5294404 | 5294752 | - | 349 | 116619145 | Acid_R0041 | - | tmRNA |

5838272 | 5838397 | + | 126 | 116619145 | Acid_R0042 | - | |

5945044 | 5945120 | - | 77 | 116619145 | Acid_R0043 | - | 13 Val tRNA
|

6120101 | 6120177 | + | 77 | 116619145 | Acid_R0044 | - | 06 Asp tRNA
|

6256025 | 6256111 | + | 87 | 116619145 | Acid_R0045 | - | 15 Leu tRNA
|

6277952 | 6278028 | + | 77 | 116619145 | Acid_R0046 | - | 11 Arg tRNA
|

6734555 | 6734632 | + | 78 | 116619145 | Acid_R0047 | - | 04 Glu tRNA
|

6791461 | 6791536 | - | 76 | 116619145 | Acid_R0048 | - | 17 Phe tRNA
|

6814760 | 6814849 | - | 90 | 116619145 | Acid_R0049 | - | 08 Ser tRNA
|

7518659 | 7518734 | + | 76 | 116619145 | Acid_R0050 | - | 12 Thr tRNA
|

7598057 | 7598134 | + | 78 | 116619145 | Acid_R0051 | - | Xaa tRNA |

7940543 | 7940630 | + | 88 | 116619145 | Acid_R0052 | - | 18 Tyr tRNA
|

7940701 | 7940776 | + | 76 | 116619145 | Acid_R0053 | - | 12 Thr tRNA
|

7942298 | 7942372 | + | 75 | 116619145 | Acid_R0054 | - | 20 Trp tRNA
|

7943870 | 7943956 | + | 87 | 116619145 | Acid_R0055 | - | 15 Leu tRNA
|

8326562 | 8326637 | - | 76 | 116619145 | Acid_R0056 | - | 12 Thr tRNA
|

8478218 | 8478304 | + | 87 | 116619145 | Acid_R0057 | - | 15 Leu tRNA
|

9616774 | 9616850 | - | 77 | 116619145 | Acid_R0058 | - | 11 Arg tRNA
|

9855350 | 9855438 | - | 89 | 116619145 | Acid_R0059 | - | 15 Leu tRNA
|

9855481 | 9855570 | - | 90 | 116619145 | Acid_R0060 | - | 08 Ser tRNA
|

9930164 | 9930239 | - | 76 | 116619145 | Acid_R0061 | - | 02 Ala tRNA
|

9965388 | 9965463 | - | 76 | 116619145 | Acid_R0062 | - | 01 Gly tRNA
|