Материалы:NC 008062

LOCUS NC_008062 1196094 bp DNA circular BCT 19-JUN-2007 DEFINITION Burkholderia cenocepacia AU 1054 chromosome 3, complete sequence. ACCESSION NC_008062 VERSION NC_008062.1 GI:107028231 KEYWORDS . SOURCE Burkholderia cenocepacia AU 1054 ORGANISM Burkholderia cenocepacia AU 1054 Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. REFERENCE 1 (bases 1 to 1196094) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Lykidis,A., LiPuma,J.J., Konstantinidis,K., Tiedje,J.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome 3 of Burkholderia cenocepacia AU 1054 JOURNAL Unpublished REFERENCE 2 (bases 1 to 1196094) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (05-JUN-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1196094) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Lykidis,A., LiPuma,J.J., Konstantinidis,K., Tiedje,J.M. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (12-MAY-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000380. URL -- http://www.jgi.doe.gov JGI Project ID: 3635680 Source DNA and bacteria available from James M Tiedje (tiedjej@msu.edu) Contacts: James M Tiedje (tiedjej@msu.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

82819 | 82951 | - | 133 | 107028231 | Bcen_R0081 | - | |

83383 | 83507 | + | 125 | 107028231 | Bcen_R0082 | - | |

418326 | 419851 | + | 1526 | 107028231 | Bcen_R0083 | - | 16S ribosomal RNA |

419915 | 419991 | + | 77 | 107028231 | Bcen_R0084 | - | 14 Ile tRNA
|

420030 | 420105 | + | 76 | 107028231 | Bcen_R0085 | - | 02 Ala tRNA
|

420382 | 423262 | + | 2881 | 107028231 | Bcen_R0086 | - | 23S ribosomal RNA |

423417 | 423529 | + | 113 | 107028231 | Bcen_R0087 | - | 5S ribosomal RNA |

453685 | 453775 | - | 91 | 107028231 | Bcen_R0088 | - | 08 Ser tRNA
|

483648 | 483722 | - | 75 | 107028231 | Bcen_R0089 | - | 13 Val tRNA
|

507896 | 507972 | + | 77 | 107028231 | Bcen_R0090 | - | 16 Met tRNA
|

588543 | 588636 | + | 94 | 107028231 | Bcen_R0091 | - | 08 Ser tRNA
|

609911 | 609986 | + | 76 | 107028231 | Bcen_R0092 | - | 02 Ala tRNA
|

610124 | 610199 | + | 76 | 107028231 | Bcen_R0093 | - | 04 Glu tRNA
|

610278 | 610354 | + | 77 | 107028231 | Bcen_R0094 | - | 06 Asp tRNA
|

610418 | 610493 | + | 76 | 107028231 | Bcen_R0095 | - | 04 Glu tRNA
|

610573 | 610649 | + | 77 | 107028231 | Bcen_R0096 | - | 06 Asp tRNA
|

610714 | 610789 | + | 76 | 107028231 | Bcen_R0097 | - | 04 Glu tRNA
|

610862 | 610938 | + | 77 | 107028231 | Bcen_R0098 | - | 06 Asp tRNA
|

741962 | 742048 | + | 87 | 107028231 | Bcen_R0099 | - | 15 Leu tRNA
|

757574 | 757649 | + | 76 | 107028231 | Bcen_R0100 | - | 13 Val tRNA
|

757673 | 757749 | + | 77 | 107028231 | Bcen_R0101 | - | 06 Asp tRNA
|

860733 | 860835 | + | 103 | 107028231 | Bcen_R0102 | - | SRP RNA; RNA component of signal recognition particle |