Материалы:NC 000907

```
LOCUS NC_000907 1830138 bp DNA circular BCT 14-AUG-2007
DEFINITION Haemophilus influenzae Rd KW20, complete genome.
ACCESSION NC_000907
VERSION NC_000907.1 GI:16271976
KEYWORDS .
SOURCE Haemophilus influenzae Rd KW20
ORGANISM Haemophilus influenzae Rd KW20
Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;
Pasteurellaceae; Haemophilus.
REFERENCE 1 (bases 1 to 1830138)
AUTHORS Langen,H., Takacs,B., Evers,S., Berndt,P., Lahm,H.W., Wipf,B.,
Gray,C. and Fountoulakis,M.
TITLE Two-dimensional map of the proteome of Haemophilus influenzae
JOURNAL Electrophoresis 21 (2), 411-429 (2000)
PUBMED 10675023
REFERENCE 2 (bases 1 to 1830138)
AUTHORS Fountoulakis,M., Juranville,J.F., Roder,D., Evers,S., Berndt,P. and
Langen,H.
TITLE Reference map of the low molecular mass proteins of Haemophilus
influenzae
JOURNAL Electrophoresis 19 (10), 1819-1827 (1998)
PUBMED 9719565
REFERENCE 3 (bases 1 to 1830138)
AUTHORS Tatusov,R.L., Mushegian,A.R., Bork,P., Brown,N.P., Hayes,W.S.,
Borodovsky,M., Rudd,K.E. and Koonin,E.V.
TITLE Metabolism and evolution of Haemophilus influenzae deduced from a
whole-genome comparison with Escherichia coli
JOURNAL Curr. Biol. 6 (3), 279-291 (1996)
PUBMED 8805245
REFERENCE 4 (bases 1 to 1830138)
AUTHORS Smith,H.O., Tomb,J.F., Dougherty,B.A., Fleischmann,R.D. and
Venter,J.C.
TITLE Frequency and distribution of DNA uptake signal sequences in the
Haemophilus influenzae Rd genome
JOURNAL Science 269 (5223), 538-540 (1995)
PUBMED 7542802
REFERENCE 5 (bases 1 to 1830138)
AUTHORS Fleischmann,R.D., Adams,M.D., White,O., Clayton,R.A.,
Kirkness,E.F., Kerlavage,A.R., Bult,C.J., Tomb,J.-F.,
Dougherty,B.A., Merrick,J.M., McKenney,K., Sutton,G.G.,
FitzHugh,W., Fields,C.A., Gocayne,J.D., Scott,J.D., Shirley,R.,
Liu,L.I., Glodek,A., Kelley,J.M., Weidman,J.F., Phillips,C.A.,
Spriggs,T., Hedblom,E., Cotton,M.D., Utterback,T., Hanna,M.C.,
Nguyen,D.T., Saudek,D.M., Brandon,R.C., Fine,L.D., Fritchman,J.L.,
Fuhrmann,J.L., Geoghagen,N.S., Gnehm,C.L., McDonald,L.A.,
Small,K.V., Fraser,C.M., Smith,H.O. and Venter,J.C.
TITLE Whole-genome random sequencing and assembly of Haemophilus
influenzae Rd
JOURNAL Science 269 (5223), 496-512 (1995)
PUBMED 7542800
REFERENCE 6 (bases 1 to 1830138)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 7 (bases 1 to 1830138)
CONSRTM NCBI Microbial Genomes Annotation Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2001) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from L42023.
COMPLETENESS: full length.
REFSEQ gene predictions performed by GeneMark 2.4/GeneMark.hmm 2.0
with comparison to original submitter provided annotation; tRNA
sequences predicted using tRNAscan-SE 1.21.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

47152 | 47241 | + | 90 | 16271976 | HI10044.1 | - | 08 Ser tRNA
|

91546 | 91621 | + | 76 | 16271976 | HI0086.2 | - | 01 Gly tRNA
|

91628 | 91701 | + | 74 | 16271976 | HI0086.1 | - | 19 Cys tRNA
|

91729 | 91815 | + | 87 | 16271976 | HI0086.3 | - | 15 Leu tRNA
|

91866 | 91941 | + | 76 | 16271976 | HI0086.4 | - | 10 Lys tRNA
|

123431 | 123559 | - | 129 | 16271976 | HI0113.2 | - | 5S ribosomal RNA |

123800 | 126702 | - | 2903 | 16271976 | HI0113.3 | - | 23S ribosomal RNA |

126969 | 127044 | - | 76 | 16271976 | HI1003.4 | - | 04 Glu tRNA
|

127172 | 128720 | - | 1549 | 16271976 | HI1003.5 | - | 16S ribosomal RNA |

128892 | 128968 | - | 77 | 16271976 | HI0113.6 | - | 03 Pro tRNA
|

128990 | 129065 | - | 76 | 16271976 | HI0113.7 | - | 09 His tRNA
|

129092 | 129168 | - | 77 | 16271976 | HI0113.8 | - | 11 Arg tRNA
|

131584 | 131660 | - | 77 | 16271976 | HI0116.1 | - | 16 Met tRNA
|

139513 | 139588 | + | 76 | 16271976 | HI0123.1 | - | 01 Gly tRNA
|

139593 | 139679 | + | 87 | 16271976 | HI0123.2 | - | 15 Leu tRNA
|

139730 | 139805 | + | 76 | 16271976 | HI0123.3 | - | 10 Lys tRNA
|

152228 | 152304 | - | 77 | 16271976 | HI0136.1 | - | 06 Asp tRNA
|

152328 | 152404 | - | 77 | 16271976 | HI0136.2 | - | 06 Asp tRNA
|

242269 | 242397 | - | 129 | 16271976 | HI0220.3 | - | 5S ribosomal RNA |

242637 | 245539 | - | 2903 | 16271976 | HI0220.4 | - | 23S ribosomal RNA |

245806 | 245881 | - | 76 | 16271976 | HI0220.6 | - | 04 Glu tRNA
|

246009 | 247557 | - | 1549 | 16271976 | HI0220.5 | - | 16S ribosomal RNA |

288153 | 288242 | - | 90 | 16271976 | HI0247.1 | - | 08 Ser tRNA
|

307279 | 307354 | - | 76 | 16271976 | HI0273.1 | - | 02 Ala tRNA
|

309048 | 309123 | + | 76 | 16271976 | HI0274.1 | - | 13 Val tRNA
|

309167 | 309242 | + | 76 | 16271976 | HI0274.2 | - | 13 Val tRNA
|

309301 | 309376 | + | 76 | 16271976 | HI0274.3 | - | 13 Val tRNA
|

309429 | 309504 | + | 76 | 16271976 | HI0274.4 | - | 13 Val tRNA
|

355348 | 355437 | - | 90 | 16271976 | HI0326.1 | - | 08 Ser tRNA
|

401796 | 401871 | - | 76 | 16271976 | HI0380.1 | - | 10 Lys tRNA
|

401895 | 401970 | - | 76 | 16271976 | HI0380.2 | - | 10 Lys tRNA
|

467760 | 467842 | + | 83 | 16271976 | HI0445.1 | - | 15 Leu tRNA
|

623821 | 625369 | + | 1549 | 16271976 | HI0601.2 | - | 16S ribosomal RNA |

625444 | 625520 | + | 77 | 16271976 | HI0601.6 | - | 14 Ile tRNA
|

625606 | 625681 | + | 76 | 16271976 | HI0601.7 | - | 02 Ala tRNA
|

626083 | 628985 | + | 2903 | 16271976 | HI0601.3 | - | 23S ribosomal RNA |

629226 | 629354 | + | 129 | 16271976 | HI0601.4 | - | 5S ribosomal RNA |

629523 | 629599 | + | 77 | 16271976 | HI0601.8 | - | 06 Asp tRNA
|

629628 | 629703 | + | 76 | 16271976 | HI0601.5 | - | 20 Trp tRNA
|

641105 | 641181 | + | 77 | 16271976 | HI0609.1 | - | 03 Pro tRNA
|

641229 | 641305 | + | 77 | 16271976 | HI0609.2 | - | 11 Arg tRNA
|

657103 | 658651 | + | 1549 | 16271976 | HI0621.2 | - | 16S ribosomal RNA |

658778 | 658853 | + | 76 | 16271976 | HI0621.5 | - | 04 Glu tRNA
|

659120 | 662022 | + | 2903 | 16271976 | HI0621.3 | - | 23S ribosomal RNA |

662263 | 662391 | + | 129 | 16271976 | HI0621.4 | - | 5S ribosomal RNA |

671274 | 671349 | + | 76 | 16271976 | HI0631.4 | - | 12 Thr tRNA
|

671379 | 671463 | + | 85 | 16271976 | HI0631.1 | - | 18 Tyr tRNA
|

671506 | 671580 | + | 75 | 16271976 | HI0631.2 | - | 01 Gly tRNA
|

671584 | 671659 | + | 76 | 16271976 | HI0631.3 | - | 12 Thr tRNA
|

684859 | 684935 | - | 77 | 16271976 | HI0642.3 | - | 11 Arg tRNA
|

684993 | 685069 | - | 77 | 16271976 | HI0642.2 | - | 11 Arg tRNA
|

685090 | 685184 | - | 95 | 16271976 | HI0642.1 | - | 08 Ser tRNA
|

753791 | 753881 | - | 91 | 16271976 | HI0707.1 | - | Sec tRNA |

771206 | 772754 | + | 1549 | 16271976 | HI0723.1 | - | 16S ribosomal RNA |

772829 | 772905 | + | 77 | 16271976 | HI0723.2 | - | 14 Ile tRNA
|

772991 | 773066 | + | 76 | 16271976 | HI0723.5 | - | 02 Ala tRNA
|

773468 | 776370 | + | 2903 | 16271976 | HI0723.3 | - | 23S ribosomal RNA |

776611 | 776739 | + | 129 | 16271976 | HI0723.4 | - | 5S ribosomal RNA |

825313 | 825388 | + | 76 | 16271976 | HI0761.1 | - | 17 Phe tRNA
|

825391 | 825466 | + | 76 | 16271976 | HI0761.2 | - | 07 Asn tRNA
|

906073 | 906271 | + | 199 | 16271976 | HI0857.1 | - | 6S RNA |

981435 | 981511 | - | 77 | 16271976 | HI0923.1 | - | 16 Met tRNA
|

1223883 | 1223996 | + | 114 | 16271976 | HI1154.1 | - | 4.5S RNA |

1324965 | 1325040 | + | 76 | 16271976 | HI1247.1 | - | 07 Asn tRNA
|

1357566 | 1357931 | - | 366 | 16271976 | HI1281.2 | - | tmRNA |

1358358 | 1358434 | + | 77 | 16271976 | HI1281.1 | - | 16 Met tRNA
|

1513211 | 1513296 | - | 86 | 16271976 | HI1424.1 | - | 15 Leu tRNA
|

1576960 | 1577041 | - | 82 | 16271976 | HI1502.1 | - | Xaa tRNA |

1639927 | 1640003 | - | 77 | 16271976 | HI1572.1 | - | 13 Val tRNA
|

1693872 | 1693946 | - | 75 | 16271976 | HI1631.4 | - | 05 Gln tRNA
|

1693994 | 1694068 | - | 75 | 16271976 | HI1631.3 | - | 05 Gln tRNA
|

1694097 | 1694181 | - | 85 | 16271976 | HI1631.2 | - | 15 Leu tRNA
|

1694187 | 1694263 | - | 77 | 16271976 | HI1631.1 | - | 16 Met tRNA
|

1746429 | 1746804 | + | 376 | 16271976 | HI1677.1 | - | RNaseP |

1787881 | 1787956 | + | 76 | 16271976 | HI1715.1 | - | 01 Gly tRNA
|

1816484 | 1816598 | - | 115 | 16271976 | HI1739.7 | - | 5S ribosomal RNA |

1816839 | 1819741 | - | 2903 | 16271976 | HI1739.6 | - | 23S ribosomal RNA |

1820143 | 1820218 | - | 76 | 16271976 | HI1739.5 | - | 02 Ala tRNA
|

1820304 | 1820380 | - | 77 | 16271976 | HI1739.4 | - | 14 Ile tRNA
|

1820456 | 1822004 | - | 1549 | 16271976 | HI1739.3 | - | 16S ribosomal RNA |