Материалы:NC 009338

LOCUS NC_009338 5619607 bp DNA circular BCT 17-APR-2007 DEFINITION Mycobacterium gilvum PYR-GCK, complete genome. ACCESSION NC_009338 VERSION NC_009338.1 GI:145220606 KEYWORDS . SOURCE Mycobacterium gilvum PYR-GCK ORGANISM Mycobacterium gilvum PYR-GCK Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Mycobacteriaceae; Mycobacterium. REFERENCE 1 (bases 1 to 5619607) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Miller,C. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome of Mycobacterium gilvum PYR-GCK JOURNAL Unpublished REFERENCE 2 (bases 1 to 5619607) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-APR-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5619607) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Miller,C. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (09-APR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000656. URL -- http://www.jgi.doe.gov JGI Project ID: 4000377 Source DNA and bacteria available from Charles Miller (cdmiller@biology.usu.edu) Contacts: Charles Miller (cdmiller@biology.usu.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

288923 | 288996 | + | 74 | 145220606 | Mflv_R0001 | - | 01 Gly tRNA
|

831384 | 831466 | - | 83 | 145220606 | Mflv_R0002 | - | 15 Leu tRNA
|

846632 | 846707 | - | 76 | 145220606 | Mflv_R0003 | - | 02 Ala tRNA
|

846843 | 846916 | - | 74 | 145220606 | Mflv_R0004 | - | 14 Ile tRNA
|

1248988 | 1249077 | + | 90 | 145220606 | Mflv_R0005 | - | 08 Ser tRNA
|

1252964 | 1253052 | + | 89 | 145220606 | Mflv_R0006 | - | 08 Ser tRNA
|

1253100 | 1253172 | + | 73 | 145220606 | Mflv_R0007 | - | 11 Arg tRNA
|

1271357 | 1271447 | + | 91 | 145220606 | Mflv_R0008 | - | 08 Ser tRNA
|

1332484 | 1332569 | - | 86 | 145220606 | Mflv_R0009 | - | 08 Ser tRNA
|

1332666 | 1332758 | + | 93 | 145220606 | Mflv_R0010 | - | SRP RNA; RNA component of signal recognition particle |

1417917 | 1417990 | - | 74 | 145220606 | Mflv_R0011 | - | 03 Pro tRNA
|

1455669 | 1455744 | + | 76 | 145220606 | Mflv_R0012 | - | 12 Thr tRNA
|

1652551 | 1652625 | - | 75 | 145220606 | Mflv_R0013 | - | 12 Thr tRNA
|

1739588 | 1739663 | - | 76 | 145220606 | Mflv_R0014 | - | 10 Lys tRNA
|

1739791 | 1739863 | + | 73 | 145220606 | Mflv_R0015 | - | 04 Glu tRNA
|

1739903 | 1739979 | + | 77 | 145220606 | Mflv_R0016 | - | 06 Asp tRNA
|

1740021 | 1740094 | + | 74 | 145220606 | Mflv_R0017 | - | 17 Phe tRNA
|

1884092 | 1884164 | - | 73 | 145220606 | Mflv_R0018 | - | 11 Arg tRNA
|

1980034 | 1980109 | + | 76 | 145220606 | Mflv_R0019 | - | 02 Ala tRNA
|

2022565 | 2022636 | - | 72 | 145220606 | Mflv_R0020 | - | 05 Gln tRNA
|

2054754 | 2054830 | + | 77 | 145220606 | Mflv_R0021 | - | 15 Leu tRNA
|

2386934 | 2387006 | - | 73 | 145220606 | Mflv_R0022 | - | 11 Arg tRNA
|

2414610 | 2416122 | + | 1513 | 145220606 | Mflv_R0023 | - | 16S ribosomal RNA |

2416551 | 2419710 | + | 3160 | 145220606 | Mflv_R0024 | - | 23S ribosomal RNA |

2419793 | 2419904 | + | 112 | 145220606 | Mflv_R0025 | - | 5S ribosomal RNA |

2463953 | 2464037 | + | 85 | 145220606 | Mflv_R0026 | - | 15 Leu tRNA
|

2652379 | 2652454 | - | 76 | 145220606 | Mflv_R0027 | - | 10 Lys tRNA
|

2653892 | 2653967 | - | 76 | 145220606 | Mflv_R0028 | - | 09 His tRNA
|

2674083 | 2674155 | - | 73 | 145220606 | Mflv_R0029 | - | 11 Arg tRNA
|

2704089 | 2704162 | - | 74 | 145220606 | Mflv_R0030 | - | 01 Gly tRNA
|

2704297 | 2704373 | + | 77 | 145220606 | Mflv_R0031 | - | 03 Pro tRNA
|

2866420 | 2866495 | + | 76 | 145220606 | Mflv_R0032 | - | 07 Asn tRNA
|

2878324 | 2878397 | + | 74 | 145220606 | Mflv_R0033 | - | 16 Met tRNA
|

2932311 | 2932385 | + | 75 | 145220606 | Mflv_R0034 | - | 13 Val tRNA
|

3066122 | 3066475 | + | 354 | 145220606 | Mflv_R0035 | - | RNase P RNA |

3217675 | 3217760 | - | 86 | 145220606 | Mflv_R0036 | - | 15 Leu tRNA
|

3717086 | 3717159 | - | 74 | 145220606 | Mflv_R0037 | - | 03 Pro tRNA
|

3739301 | 3739412 | - | 112 | 145220606 | Mflv_R0038 | - | 5S ribosomal RNA |

3739495 | 3742653 | - | 3159 | 145220606 | Mflv_R0039 | - | 23S ribosomal RNA |

3743082 | 3744594 | - | 1513 | 145220606 | Mflv_R0040 | - | 16S ribosomal RNA |

3790949 | 3791019 | - | 71 | 145220606 | Mflv_R0041 | - | Xaa tRNA |

3813229 | 3813305 | + | 77 | 145220606 | Mflv_R0042 | - | 15 Leu tRNA
|

4154724 | 4154795 | - | 72 | 145220606 | Mflv_R0043 | - | 13 Val tRNA
|

4155427 | 4155502 | + | 76 | 145220606 | Mflv_R0044 | - | 01 Gly tRNA
|

4155527 | 4155600 | + | 74 | 145220606 | Mflv_R0045 | - | 19 Cys tRNA
|

4155613 | 4155687 | + | 75 | 145220606 | Mflv_R0046 | - | 13 Val tRNA
|

4487808 | 4487883 | - | 76 | 145220606 | Mflv_R0047 | - | 04 Glu tRNA
|

4487946 | 4488020 | - | 75 | 145220606 | Mflv_R0048 | - | 05 Gln tRNA
|

4684643 | 4684718 | - | 76 | 145220606 | Mflv_R0049 | - | 02 Ala tRNA
|

4729388 | 4729753 | + | 366 | 145220606 | Mflv_R0050 | - | tmRNA |

4948427 | 4948503 | - | 77 | 145220606 | Mflv_R0051 | - | 16 Met tRNA
|

5441926 | 5441998 | - | 73 | 145220606 | Mflv_R0052 | - | 20 Trp tRNA
|

5443890 | 5443963 | - | 74 | 145220606 | Mflv_R0053 | - | 16 Met tRNA
|

5444013 | 5444085 | - | 73 | 145220606 | Mflv_R0054 | - | 12 Thr tRNA
|

5596430 | 5596515 | - | 86 | 145220606 | Mflv_R0055 | - | 18 Tyr tRNA
|