Материалы:NC 007614

LOCUS NC_007614 3184243 bp DNA circular BCT 31-MAR-2006 DEFINITION Nitrosospira multiformis ATCC 25196 chromosome 1, complete sequence. ACCESSION NC_007614 VERSION NC_007614.1 GI:82701135 KEYWORDS . SOURCE Nitrosospira multiformis ATCC 25196 ORGANISM Nitrosospira multiformis ATCC 25196 Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira. REFERENCE 1 (bases 1 to 3184243) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Lykidis,A. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Chromosome 1 of Nitrosospira multiformis ATCC 25196 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3184243) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (23-NOV-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3184243) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Lykidis,A. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (08-AUG-2005) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000103. URL -- http://www.jgi.doe.gov Source DNA available from Dan Arp (arpd@bcc.orst.edu) Bacteria available from ATCC: ATCC 25196 Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LLNL Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

27371 | 27446 | + | 76 | 82701135 | Nmul_AR0001 | - | 11 Arg tRNA
|

80715 | 80788 | + | 74 | 82701135 | Nmul_AR0002 | - | 01 Gly tRNA
|

142086 | 142161 | + | 76 | 82701135 | Nmul_AR0003 | - | 02 Ala tRNA
|

155336 | 155411 | + | 76 | 82701135 | Nmul_AR0004 | - | 10 Lys tRNA
|

218904 | 218980 | - | 77 | 82701135 | Nmul_AR0005 | - | 11 Arg tRNA
|

241013 | 241249 | - | 237 | 82701135 | Nmul_AR0006 | - | RNA component of RNaseP |

253129 | 253205 | + | 77 | 82701135 | Nmul_AR0007 | - | 03 Pro tRNA
|

253241 | 253317 | + | 77 | 82701135 | Nmul_AR0008 | - | 11 Arg tRNA
|

253378 | 253452 | + | 75 | 82701135 | Nmul_AR0009 | - | 09 His tRNA
|

285113 | 285189 | - | 77 | 82701135 | Nmul_AR0010 | - | 13 Val tRNA
|

553914 | 553990 | + | 77 | 82701135 | Nmul_AR0011 | - | 03 Pro tRNA
|

562629 | 564157 | + | 1529 | 82701135 | Nmul_AR0012 | - | 16S ribosomal RNA |

564282 | 564358 | + | 77 | 82701135 | Nmul_AR0013 | - | 14 Ile tRNA
|

564366 | 564441 | + | 76 | 82701135 | Nmul_AR0014 | - | 02 Ala tRNA
|

564814 | 567702 | + | 2889 | 82701135 | Nmul_AR0015 | - | 23S ribosomal RNA |

567825 | 567942 | + | 118 | 82701135 | Nmul_AR0016 | - | 5S ribosomal RNA |

673637 | 673711 | + | 75 | 82701135 | Nmul_AR0017 | - | 05 Gln tRNA
|

874636 | 874720 | + | 85 | 82701135 | Nmul_AR0018 | - | 18 Tyr tRNA
|

874898 | 874971 | + | 74 | 82701135 | Nmul_AR0019 | - | 01 Gly tRNA
|

875060 | 875134 | + | 75 | 82701135 | Nmul_AR0020 | - | 12 Thr tRNA
|

876463 | 876538 | + | 76 | 82701135 | Nmul_AR0021 | - | 20 Trp tRNA
|

1082394 | 1082485 | - | 92 | 82701135 | Nmul_AR0022 | - | 08 Ser tRNA
|

1162686 | 1162761 | - | 76 | 82701135 | Nmul_AR0023 | - | 12 Thr tRNA
|

1257731 | 1257815 | + | 85 | 82701135 | Nmul_AR0024 | - | 15 Leu tRNA
|

1464533 | 1464607 | + | 75 | 82701135 | Nmul_AR0025 | - | 01 Gly tRNA
|

1464755 | 1464828 | + | 74 | 82701135 | Nmul_AR0026 | - | 19 Cys tRNA
|

1488892 | 1488980 | + | 89 | 82701135 | Nmul_AR0027 | - | 15 Leu tRNA
|

1838011 | 1838086 | - | 76 | 82701135 | Nmul_AR0028 | - | 04 Glu tRNA
|

1838145 | 1838220 | - | 76 | 82701135 | Nmul_AR0029 | - | 02 Ala tRNA
|

1840080 | 1840154 | + | 75 | 82701135 | Nmul_AR0030 | - | 13 Val tRNA
|

1935662 | 1935737 | - | 76 | 82701135 | Nmul_AR0031 | - | 07 Asn tRNA
|

2074756 | 2074832 | - | 77 | 82701135 | Nmul_AR0032 | - | 03 Pro tRNA
|

2142335 | 2142438 | - | 104 | 82701135 | Nmul_AR0033 | - | 4.5S ribosomal RNA component of signal recognition particle (SRP) |

2144593 | 2144669 | - | 77 | 82701135 | Nmul_AR0034 | - | 16 Met tRNA
|

2232983 | 2233075 | - | 93 | 82701135 | Nmul_AR0035 | - | 08 Ser tRNA
|

2244919 | 2245005 | + | 87 | 82701135 | Nmul_AR0036 | - | 15 Leu tRNA
|

2261847 | 2261923 | + | 77 | 82701135 | Nmul_AR0037 | - | 11 Arg tRNA
|

2348630 | 2348706 | - | 77 | 82701135 | Nmul_AR0038 | - | 16 Met tRNA
|

2480674 | 2481035 | - | 362 | 82701135 | Nmul_AR0039 | - | tmRNA |

2514714 | 2514801 | - | 88 | 82701135 | Nmul_AR0040 | - | 08 Ser tRNA
|

2628672 | 2628764 | - | 93 | 82701135 | Nmul_AR0041 | - | 08 Ser tRNA
|

2662578 | 2662654 | - | 77 | 82701135 | Nmul_AR0042 | - | 06 Asp tRNA
|

2662667 | 2662742 | - | 76 | 82701135 | Nmul_AR0043 | - | 13 Val tRNA
|

2669090 | 2669174 | - | 85 | 82701135 | Nmul_AR0044 | - | 15 Leu tRNA
|

2769529 | 2769615 | + | 87 | 82701135 | Nmul_AR0045 | - | 15 Leu tRNA
|

2791773 | 2791848 | - | 76 | 82701135 | Nmul_AR0046 | - | 16 Met tRNA
|

3043258 | 3043333 | - | 76 | 82701135 | Nmul_AR0047 | - | 17 Phe tRNA
|

3123890 | 3123965 | + | 76 | 82701135 | Nmul_AR0048 | - | 10 Lys tRNA
|

3157579 | 3157654 | + | 76 | 82701135 | Nmul_AR0049 | - | 12 Thr tRNA
|