Материалы:NC 006512

```
LOCUS NC_006512 2839318 bp DNA circular BCT 03-DEC-2005
DEFINITION Idiomarina loihiensis L2TR, complete genome.
ACCESSION NC_006512
VERSION NC_006512.1 GI:56459112
KEYWORDS .
SOURCE Idiomarina loihiensis L2TR
ORGANISM Idiomarina loihiensis L2TR
Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
Idiomarinaceae; Idiomarina.
REFERENCE 1 (bases 1 to 2839318)
AUTHORS Hou,S., Saw,J.H., Lee,K.S., Freitas,T.A., Belisle,C.,
Kawarabayasi,Y., Donachie,S.P., Pikina,A., Galperin,M.Y.,
Koonin,E.V., Makarova,K.S., Omelchenko,M.V., Sorokin,A., Wolf,Y.I.,
Li,Q.X., Keum,Y.S., Campbell,S., Denery,J., Aizawa,S.I.,
Shibata,S., Malahoff,A. and Alam,M.
TITLE Genome sequence of the deep-sea {gamma}-proteobacterium Idiomarina
loihiensis reveals amino acid fermentation as a source of carbon
and energy
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (52), 18036-18041 (2004)
PUBMED 15596722
REFERENCE 2 (bases 1 to 2839318)
AUTHORS .
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (09-DEC-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2839318)
AUTHORS Hou,S., Saw,J.H., Lee,K.S., Freitas,T.A., Belisle,C.,
Kawarabayasi,Y., Donachie,S.P., Galperin,M.Y., Koonin,E.V.,
Makarova,K.S., Omelchenko,M.V., Sorokin,A., Wolf,Y.I., Li,Q.,
Keum,Y.S., Campbell,S., Denery,J., Aizawa,S.-I., Shibata,S.,
Malahoff,A. and Alam,M.
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2004) Microbiology, University of Hawaii at
Manoa, 2538 The Mall, Snyder 111, Honolulu, HI 96822, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE017340.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

51807 | 51881 | + | 75 | 56459112 | ILt0047.1 | - | 11 Arg tRNA
|

348104 | 348176 | + | 73 | 56459112 | ILt0337.1 | - | 12 Thr tRNA
|

348199 | 348280 | + | 82 | 56459112 | ILt0337.2 | - | 18 Tyr tRNA
|

348329 | 348400 | + | 72 | 56459112 | ILt0337.3 | - | 01 Gly tRNA
|

348416 | 348488 | + | 73 | 56459112 | ILt0337.4 | - | 12 Thr tRNA
|

349907 | 349980 | + | 74 | 56459112 | ILt0338.1 | - | 20 Trp tRNA
|

438750 | 439000 | - | 251 | 56459112 | IL0425.1 | - | ribonuclease P RNA |

709110 | 709193 | - | 84 | 56459112 | ILt0651.1 | - | 15 Leu tRNA
|

709222 | 709292 | - | 71 | 56459112 | ILt0651.2 | - | 19 Cys tRNA
|

709302 | 709374 | - | 73 | 56459112 | ILt0651.3 | - | 01 Gly tRNA
|

715193 | 715281 | - | 89 | 56459112 | ILt0657.1 | - | 08 Ser tRNA
|

734230 | 734303 | + | 74 | 56459112 | ILt0678.1 | - | 03 Pro tRNA
|

883929 | 884010 | + | 82 | 56459112 | ILt0827.1 | - | 18 Tyr tRNA
|

992588 | 992661 | + | 74 | 56459112 | ILt0938.1 | - | 16 Met tRNA
|

992684 | 992765 | + | 82 | 56459112 | ILt0938.2 | - | 15 Leu tRNA
|

992790 | 992861 | + | 72 | 56459112 | ILt0938.3 | - | 05 Gln tRNA
|

992902 | 992973 | + | 72 | 56459112 | ILt0938.4 | - | 05 Gln tRNA
|

992991 | 993074 | + | 84 | 56459112 | ILt0938.5 | - | 15 Leu tRNA
|

1026091 | 1026164 | - | 74 | 56459112 | ILt0970.1 | - | 16 Met tRNA
|

1026243 | 1026326 | - | 84 | 56459112 | ILt0970.2 | - | 15 Leu tRNA
|

1074965 | 1075038 | - | 74 | 56459112 | ILt1007.1 | - | 03 Pro tRNA
|

1075069 | 1075141 | - | 73 | 56459112 | ILt1007.2 | - | 09 His tRNA
|

1075171 | 1075244 | - | 74 | 56459112 | ILt1007.3 | - | 11 Arg tRNA
|

1075276 | 1075349 | - | 74 | 56459112 | ILt1007.4 | - | 03 Pro tRNA
|

1147526 | 1147610 | - | 85 | 56459112 | ILt1067.1 | - | 08 Ser tRNA
|

1163996 | 1164068 | - | 73 | 56459112 | ILt1077.1 | - | 10 Lys tRNA
|

1164102 | 1164174 | - | 73 | 56459112 | ILt1077.2 | - | 10 Lys tRNA
|

1233478 | 1233551 | + | 74 | 56459112 | ILt1154.1 | - | 11 Arg tRNA
|

1262899 | 1263017 | - | 119 | 56459112 | ILr1179.1 | - | 5S ribosomal RNA |

1263305 | 1266061 | - | 2757 | 56459112 | ILr1179.2 | - | 23S ribosomal RNA |

1266281 | 1266353 | - | 73 | 56459112 | ILt1179.1 | - | 02 Ala tRNA
|

1266471 | 1266544 | - | 74 | 56459112 | ILt1179.2 | - | 14 Ile tRNA
|

1266652 | 1268197 | - | 1546 | 56459112 | ILr1179.3 | - | 16S ribosomal RNA |

1304306 | 1304378 | + | 73 | 56459112 | ILt1213.1 | - | 17 Phe tRNA
|

1376974 | 1377047 | - | 74 | 56459112 | ILt1281.1 | - | 16 Met tRNA
|

1506314 | 1506387 | + | 74 | 56459112 | ILt1404.1 | - | 13 Val tRNA
|

1770857 | 1771115 | - | 259 | 56459112 | IL2641 | - | SsrA |

1820016 | 1820089 | - | 74 | 56459112 | ILt1691.1 | - | 06 Asp tRNA
|

1820119 | 1820192 | - | 74 | 56459112 | ILt1691.2 | - | 06 Asp tRNA
|

1869208 | 1869281 | - | 74 | 56459112 | ILt1736.1 | - | 11 Arg tRNA
|

1869306 | 1869379 | - | 74 | 56459112 | ILt1736.2 | - | 11 Arg tRNA
|

1869404 | 1869493 | - | 90 | 56459112 | ILt1736.3 | - | 08 Ser tRNA
|

1903151 | 1903223 | - | 73 | 56459112 | ILt1768.1 | - | 04 Glu tRNA
|

1903262 | 1903334 | - | 73 | 56459112 | ILt1716.2 | - | 04 Glu tRNA
|

1903370 | 1903442 | - | 73 | 56459112 | ILt1716.3 | - | 04 Glu tRNA
|

1903493 | 1903565 | - | 73 | 56459112 | ILt1716.4 | - | 02 Ala tRNA
|

1906022 | 1906094 | + | 73 | 56459112 | ILt1770.1 | - | 13 Val tRNA
|

1906133 | 1906205 | + | 73 | 56459112 | ILt1770.2 | - | 13 Val tRNA
|

1928016 | 1928089 | + | 74 | 56459112 | ILt1791.1 | - | 07 Asn tRNA
|

1928115 | 1928188 | + | 74 | 56459112 | ILt1791.2 | - | 07 Asn tRNA
|

2017169 | 2017242 | - | 74 | 56459112 | ILt1885.1 | - | 20 Trp tRNA
|

2023643 | 2023761 | - | 119 | 56459112 | ILr1888.1 | - | 5S ribosomal RNA |

2024015 | 2026771 | - | 2757 | 56459112 | ILr1888.2 | - | 23S ribosomal RNA |

2026991 | 2027063 | - | 73 | 56459112 | ILt1888.1 | - | 02 Ala tRNA
|

2027326 | 2027399 | - | 74 | 56459112 | ILt1888.2 | - | 14 Ile tRNA
|

2027508 | 2029052 | - | 1545 | 56459112 | ILr1888.3 | - | 16S ribosomal RNA |

2069910 | 2069992 | - | 83 | 56459112 | ILt1944.1 | - | 15 Leu tRNA
|

2235800 | 2235987 | + | 188 | 56459112 | IL2642 | - | SsrS |

2347520 | 2347592 | - | 73 | 56459112 | ILt2197.1 | - | 16 Met tRNA
|

2432416 | 2432538 | - | 123 | 56459112 | ILr2271.1 | - | 5S ribosomal RNA |

2432826 | 2435583 | - | 2758 | 56459112 | ILr2271.2 | - | 23S ribosomal RNA |

2435803 | 2435875 | - | 73 | 56459112 | ILt2271.1 | - | 02 Ala tRNA
|

2436138 | 2436211 | - | 74 | 56459112 | ILt2271.2 | - | 14 Ile tRNA
|

2436320 | 2437864 | - | 1545 | 56459112 | ILr2271.3 | - | 16S ribosomal RNA |

2465248 | 2465320 | - | 73 | 56459112 | ILt2299.1 | - | 01 Gly tRNA
|

2465355 | 2465427 | - | 73 | 56459112 | ILt2299.2 | - | 01 Gly tRNA
|

2748761 | 2748879 | - | 119 | 56459112 | ILr2563.1 | - | 5S ribosomal RNA |

2749167 | 2751925 | - | 2759 | 56459112 | ILr2563.2 | - | 23S ribosomal RNA |

2752144 | 2752216 | - | 73 | 56459112 | ILt2563.1 | - | 02 Ala tRNA
|

2752479 | 2752552 | - | 74 | 56459112 | ILt2563.2 | - | 14 Ile tRNA
|

2752660 | 2754205 | - | 1546 | 56459112 | ILr2563.3 | - | 16S ribosomal RNA |