Материалы:NC 005362

```
LOCUS NC_005362 1992676 bp DNA circular BCT 26-JAN-2007
DEFINITION Lactobacillus johnsonii NCC 533, complete genome.
ACCESSION NC_005362
VERSION NC_005362.1 GI:42518084
KEYWORDS .
SOURCE Lactobacillus johnsonii NCC 533
ORGANISM Lactobacillus johnsonii NCC 533
Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae;
Lactobacillus.
REFERENCE 1 (bases 1 to 1992676)
AUTHORS van der Kaaij,H., Desiere,F., Mollet,B. and Germond,J.E.
TITLE L-alanine auxotrophy of Lactobacillus johnsonii as demonstrated by
physiological, genomic, and gene complementation approaches
JOURNAL Appl. Environ. Microbiol. 70 (3), 1869-1873 (2004)
PUBMED 15006820
REFERENCE 2 (bases 1 to 1992676)
AUTHORS Pridmore,R.D., Berger,B., Desiere,F., Vilanova,D., Barretto,C.,
Pittet,A.C., Zwahlen,M.C., Rouvet,M., Altermann,E., Barrangou,R.,
Mollet,B., Mercenier,A., Klaenhammer,T., Arigoni,F. and Schell,M.A.
TITLE The genome sequence of the probiotic intestinal bacterium
Lactobacillus johnsonii NCC 533
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (8), 2512-2517 (2004)
PUBMED 14983040
REFERENCE 3 (bases 1 to 1992676)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (11-SEP-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (bases 1 to 1992676)
AUTHORS Pridmore,R.D., Berger,B., Desiere,F., Vilanova,D., Barretto,C.,
Pittet,A.-C., Zwahlen,M.-C., Rouvet,M., Barrangou,R., Altermann,E.,
Mollet,B., Mercenier,A., Klaenhammer,T., Arigoni,F. and Schell,M.A.
TITLE Direct Submission
JOURNAL Submitted (01-DEC-2003) Nutrition and Health, Nestle Research
Center, P.O.Box 44, Lausanne 26, Vaud CH-1000, Switzerland
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE017198.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

19503 | 19578 | + | 76 | 42518084 | LJT001 | - | 12 Thr tRNA
|

21315 | 21390 | + | 76 | 42518084 | LJT002 | - | 12 Thr tRNA
|

85937 | 86009 | - | 73 | 42518084 | LJT003 | - | 10 Lys tRNA
|

87617 | 87689 | - | 73 | 42518084 | LJT004 | - | 10 Lys tRNA
|

209038 | 209110 | + | 73 | 42518084 | LJT005 | - | 12 Thr tRNA
|

228891 | 228961 | - | 71 | 42518084 | LJT006 | - | 01 Gly tRNA
|

327595 | 327669 | + | 75 | 42518084 | LJT007 | - | 01 Gly tRNA
|

327710 | 327783 | + | 74 | 42518084 | LJT008 | - | 03 Pro tRNA
|

340597 | 340667 | + | 71 | 42518084 | LJT009 | - | 08 Ser tRNA
|

340727 | 340798 | + | 72 | 42518084 | LJT010 | - | 04 Glu tRNA
|

340937 | 341018 | + | 82 | 42518084 | LJT011 | - | 18 Tyr tRNA
|

341099 | 341172 | + | 74 | 42518084 | LJT012 | - | 17 Phe tRNA
|

558550 | 560200 | + | 1651 | 42518084 | LJR007 | - | 16S ribosomal RNA |

560300 | 563350 | + | 3051 | 42518084 | LJR013 | - | 23S ribosomal RNA |

563337 | 563453 | + | 117 | 42518084 | LJR002 | - | 5S ribosomal RNA |

563466 | 563538 | + | 73 | 42518084 | LJT013 | - | 07 Asn tRNA
|

563561 | 563650 | + | 90 | 42518084 | LJT014 | - | 08 Ser tRNA
|

563769 | 563840 | + | 72 | 42518084 | LJT015 | - | 04 Glu tRNA
|

563864 | 563936 | + | 73 | 42518084 | LJT016 | - | 13 Val tRNA
|

707462 | 707534 | + | 73 | 42518084 | LJT017 | - | 11 Arg tRNA
|

775832 | 775903 | - | 72 | 42518084 | LJT018 | - | Xaa tRNA |

828305 | 828376 | + | 72 | 42518084 | LJT019 | - | 04 Glu tRNA
|

828382 | 828454 | + | 73 | 42518084 | LJT020 | - | 05 Gln tRNA
|

1316937 | 1317009 | - | 73 | 42518084 | LJT021 | - | 04 Glu tRNA
|

1330469 | 1330556 | - | 88 | 42518084 | LJT022 | - | 08 Ser tRNA
|

1454674 | 1454747 | - | 74 | 42518084 | LJT023 | - | 11 Arg tRNA
|

1553948 | 1554034 | - | 87 | 42518084 | LJT024 | - | 15 Leu tRNA
|

1609296 | 1609384 | - | 89 | 42518084 | LJT025 | - | 15 Leu tRNA
|

1631292 | 1631363 | - | 72 | 42518084 | LJT026 | - | 05 Gln tRNA
|

1631419 | 1631500 | - | 82 | 42518084 | LJT027 | - | 18 Tyr tRNA
|

1633336 | 1633407 | - | 72 | 42518084 | LJT028 | - | 05 Gln tRNA
|

1643767 | 1643839 | - | 73 | 42518084 | LJT029 | - | 12 Thr tRNA
|

1659716 | 1659788 | - | 73 | 42518084 | LJT030 | - | 07 Asn tRNA
|

1659801 | 1659917 | - | 117 | 42518084 | LJR003 | - | 5S ribosomal RNA |

1659904 | 1662954 | - | 3051 | 42518084 | LJR015 | - | 23S ribosomal RNA |

1663054 | 1664704 | - | 1651 | 42518084 | LJR008 | - | 16S ribosomal RNA |

1665073 | 1665162 | - | 90 | 42518084 | LJT031 | - | 08 Ser tRNA
|

1665165 | 1665238 | - | 74 | 42518084 | LJT032 | - | 14 Ile tRNA
|

1665247 | 1665320 | - | 74 | 42518084 | LJT033 | - | 01 Gly tRNA
|

1665338 | 1665410 | - | 73 | 42518084 | LJT034 | - | 17 Phe tRNA
|

1665415 | 1665487 | - | 73 | 42518084 | LJT035 | - | 06 Asp tRNA
|

1665491 | 1665564 | - | 74 | 42518084 | LJT036 | - | 16 Met tRNA
|

1665596 | 1665669 | - | 74 | 42518084 | LJT037 | - | 16 Met tRNA
|

1665683 | 1665756 | - | 74 | 42518084 | LJT038 | - | 16 Met tRNA
|

1665787 | 1665860 | - | 74 | 42518084 | LJT039 | - | 03 Pro tRNA
|

1665866 | 1665939 | - | 74 | 42518084 | LJT040 | - | 11 Arg tRNA
|

1665949 | 1666034 | - | 86 | 42518084 | LJT041 | - | 15 Leu tRNA
|

1666047 | 1666118 | - | 72 | 42518084 | LJT042 | - | 01 Gly tRNA
|

1666137 | 1666209 | - | 73 | 42518084 | LJT043 | - | 12 Thr tRNA
|

1666211 | 1666295 | - | 85 | 42518084 | LJT044 | - | 15 Leu tRNA
|

1666316 | 1666388 | - | 73 | 42518084 | LJT045 | - | 10 Lys tRNA
|

1666391 | 1666463 | - | 73 | 42518084 | LJT046 | - | 13 Val tRNA
|

1666468 | 1666584 | - | 117 | 42518084 | LJR001 | - | 5S ribosomal RNA |

1666571 | 1669621 | - | 3051 | 42518084 | LJR014 | - | 23S ribosomal RNA |

1669721 | 1671371 | - | 1651 | 42518084 | LJR009 | - | 16S ribosomal RNA |

1677348 | 1677431 | - | 84 | 42518084 | LJT047 | - | 15 Leu tRNA
|

1677463 | 1677533 | - | 71 | 42518084 | LJT048 | - | 19 Cys tRNA
|

1677554 | 1677625 | - | 72 | 42518084 | LJT049 | - | 05 Gln tRNA
|

1677630 | 1677705 | - | 76 | 42518084 | LJT050 | - | 09 His tRNA
|

1677720 | 1677790 | - | 71 | 42518084 | LJT051 | - | 20 Trp tRNA
|

1677798 | 1677879 | - | 82 | 42518084 | LJT052 | - | 18 Tyr tRNA
|

1677884 | 1677956 | - | 73 | 42518084 | LJT053 | - | 17 Phe tRNA
|

1677962 | 1678034 | - | 73 | 42518084 | LJT054 | - | 06 Asp tRNA
|

1678038 | 1678111 | - | 74 | 42518084 | LJT055 | - | 16 Met tRNA
|

1678119 | 1678209 | - | 91 | 42518084 | LJT056 | - | 08 Ser tRNA
|

1678236 | 1678307 | - | 72 | 42518084 | LJT057 | - | 04 Glu tRNA
|

1679522 | 1679611 | - | 90 | 42518084 | LJT058 | - | 08 Ser tRNA
|

1679614 | 1679687 | - | 74 | 42518084 | LJT059 | - | 14 Ile tRNA
|

1679696 | 1679769 | - | 74 | 42518084 | LJT060 | - | 01 Gly tRNA
|

1679787 | 1679859 | - | 73 | 42518084 | LJT061 | - | 17 Phe tRNA
|

1679864 | 1679936 | - | 73 | 42518084 | LJT062 | - | 06 Asp tRNA
|

1679940 | 1680013 | - | 74 | 42518084 | LJT063 | - | 16 Met tRNA
|

1680045 | 1680118 | - | 74 | 42518084 | LJT064 | - | 16 Met tRNA
|

1680132 | 1680205 | - | 74 | 42518084 | LJT065 | - | 16 Met tRNA
|

1680236 | 1680309 | - | 74 | 42518084 | LJT066 | - | 03 Pro tRNA
|

1680315 | 1680388 | - | 74 | 42518084 | LJT067 | - | 11 Arg tRNA
|

1680398 | 1680483 | - | 86 | 42518084 | LJT068 | - | 15 Leu tRNA
|

1680496 | 1680567 | - | 72 | 42518084 | LJT069 | - | 01 Gly tRNA
|

1680586 | 1680658 | - | 73 | 42518084 | LJT070 | - | 12 Thr tRNA
|

1680660 | 1680744 | - | 85 | 42518084 | LJT071 | - | 15 Leu tRNA
|

1680765 | 1680837 | - | 73 | 42518084 | LJT072 | - | 10 Lys tRNA
|

1680840 | 1680912 | - | 73 | 42518084 | LJT073 | - | 13 Val tRNA
|

1680917 | 1681033 | - | 117 | 42518084 | LJR004 | - | 5S ribosomal RNA |

1681020 | 1684070 | - | 3051 | 42518084 | LJR016 | - | 23S ribosomal RNA |

1684170 | 1685820 | - | 1651 | 42518084 | LJR010 | - | 16S ribosomal RNA |

1879252 | 1879324 | - | 73 | 42518084 | LJT074 | - | 07 Asn tRNA
|

1879337 | 1879453 | - | 117 | 42518084 | LJR005 | - | 5S ribosomal RNA |

1879440 | 1882488 | - | 3049 | 42518084 | LJR017 | - | 23S ribosomal RNA |

1882545 | 1882617 | - | 73 | 42518084 | LJT075 | - | 02 Ala tRNA
|

1882653 | 1882726 | - | 74 | 42518084 | LJT076 | - | 14 Ile tRNA
|

1882821 | 1884471 | - | 1651 | 42518084 | LJR011 | - | 16S ribosomal RNA |

1884764 | 1884839 | - | 76 | 42518084 | LJT077 | - | 07 Asn tRNA
|

1884852 | 1884968 | - | 117 | 42518084 | LJR006 | - | 5S ribosomal RNA |

1884955 | 1888003 | - | 3049 | 42518084 | LJR018 | - | 23S ribosomal RNA |

1888060 | 1888132 | - | 73 | 42518084 | LJT078 | - | 02 Ala tRNA
|

1888168 | 1888241 | - | 74 | 42518084 | LJT079 | - | 14 Ile tRNA
|

1888336 | 1889986 | - | 1651 | 42518084 | LJR012 | - | 16S ribosomal RNA |