Материалы:NC 009708

```
LOCUS NC_009708 4723306 bp DNA circular BCT 19-SEP-2007
DEFINITION Yersinia pseudotuberculosis IP 31758, complete genome.
ACCESSION NC_009708
VERSION NC_009708.1 GI:153946813
KEYWORDS .
SOURCE Yersinia pseudotuberculosis IP 31758
ORGANISM Yersinia pseudotuberculosis IP 31758
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Yersinia.
REFERENCE 1 (bases 1 to 4723306)
AUTHORS Eppinger,M., Rosovitz,M.J., Fricke,W.F., Rasko,D.A., Kokorina,G.,
Fayolle,C., Lindler,L.E., Carniel,E. and Ravel,J.
TITLE The complete genome sequence of Yersinia pseudotuberculosis
IP31758, the causative agent of Far East scarlet-like fever
JOURNAL PLoS Genet. 3 (8), E142 (2007)
PUBMED 17784789
REFERENCE 2 (bases 1 to 4723306)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (26-JUL-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 4723306)
AUTHORS Eppinger,M., Rosovitz,M., Fricke,W.W., Rasko,D.A., Lindler,L.E.,
Carniel,E. and Ravel,J.
TITLE Direct Submission
JOURNAL Submitted (05-JUN-2007) Microbial Genomics and Pathogen Functional
Genomic Resource Center, J. Craig Venter Institute, 9712 Medical
Center Drive, Rockville, MD 20850, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000720.
Inquiries for DNA can be made to Elizabeth Carniel
(carniel2@pasteur.fr).
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

12000 | 13542 | + | 1543 | 153946813 | YpsIP31758_4189 | - | 16S ribosomal RNA |

13678 | 13755 | + | 78 | 153946813 | YpsIP31758_4190 | - | 04 Glu tRNA
|

14007 | 16913 | + | 2907 | 153946813 | YpsIP31758_4191 | - | 23S ribosomal RNA |

17021 | 17140 | + | 120 | 153946813 | YpsIP31758_4192 | - | 5S ribosomal RNA |

25613 | 25730 | + | 118 | 153946813 | YpsIP31758_4297 | - | Spot 42 RNA |

26868 | 27121 | + | 254 | 153946813 | YpsIP31758_4298 | - | CsrC RNA family |

159777 | 161319 | + | 1543 | 153946813 | YpsIP31758_4193 | - | 16S ribosomal RNA |

161455 | 161532 | + | 78 | 153946813 | YpsIP31758_4194 | - | 04 Glu tRNA
|

161784 | 164690 | + | 2907 | 153946813 | YpsIP31758_4195 | - | 23S ribosomal RNA |

164798 | 164917 | + | 120 | 153946813 | YpsIP31758_4196 | - | 5S ribosomal RNA |

165040 | 165118 | + | 79 | 153946813 | YpsIP31758_4197 | - | 06 Asp tRNA
|

165125 | 165202 | + | 78 | 153946813 | YpsIP31758_4198 | - | 20 Trp tRNA
|

221179 | 221255 | + | 77 | 153946813 | YpsIP31758_4199 | - | 11 Arg tRNA
|

221338 | 221415 | + | 78 | 153946813 | YpsIP31758_4200 | - | 09 His tRNA
|

221430 | 221518 | + | 89 | 153946813 | YpsIP31758_4201 | - | 15 Leu tRNA
|

221592 | 221670 | + | 79 | 153946813 | YpsIP31758_4202 | - | 03 Pro tRNA
|

322792 | 324334 | + | 1543 | 153946813 | YpsIP31758_4203 | - | 16S ribosomal RNA |

324436 | 324514 | + | 79 | 153946813 | YpsIP31758_4204 | - | 14 Ile tRNA
|

324564 | 324641 | + | 78 | 153946813 | YpsIP31758_4205 | - | 02 Ala tRNA
|

324859 | 327765 | + | 2907 | 153946813 | YpsIP31758_4206 | - | 23S ribosomal RNA |

327875 | 327990 | + | 116 | 153946813 | YpsIP31758_4300 | - | 5S ribosomal RNA |

328005 | 328082 | + | 78 | 153946813 | YpsIP31758_4207 | - | 12 Thr tRNA
|

328120 | 328239 | + | 120 | 153946813 | YpsIP31758_4208 | - | 5S ribosomal RNA |

547912 | 548024 | - | 113 | 153946813 | YpsIP31758_4301 | - | SraH RNA |

554644 | 554946 | + | 303 | 153946813 | YpsIP31758_4302 | - | RNase P class A |

649301 | 649379 | - | 79 | 153946813 | YpsIP31758_4209 | - | 16 Met tRNA
|

977582 | 977659 | - | 78 | 153946813 | YpsIP31758_4210 | - | 17 Phe tRNA
|

1037218 | 1037399 | - | 182 | 153946813 | YpsIP31758_4304 | - | 6S / SsrS RNA |

1068026 | 1068099 | + | 74 | 153946813 | YpsIP31758_4211 | - | 01 Gly tRNA
|

1165923 | 1166017 | + | 95 | 153946813 | YpsIP31758_4305 | - | sraE/rygA/rygB family RNA |

1195603 | 1195679 | - | 77 | 153946813 | YpsIP31758_4212 | - | 16 Met tRNA
|

1195740 | 1195816 | - | 77 | 153946813 | YpsIP31758_4213 | - | 16 Met tRNA
|

1195984 | 1196060 | - | 77 | 153946813 | YpsIP31758_4214 | - | 16 Met tRNA
|

1200711 | 1200817 | - | 107 | 153946813 | YpsIP31758_4306 | - | gcvB RNA |

1208063 | 1208385 | + | 323 | 153946813 | YpsIP31758_4307 | - | CsrB/RsmB RNA family |

1215459 | 1215665 | + | 207 | 153946813 | YpsIP31758_4308 | - | t44 RNA |

1247810 | 1249364 | + | 1555 | 153946813 | YpsIP31758_4215 | - | 16S ribosomal RNA |

1249488 | 1249565 | + | 78 | 153946813 | YpsIP31758_4216 | - | 04 Glu tRNA
|

1249817 | 1252723 | + | 2907 | 153946813 | YpsIP31758_4217 | - | 23S ribosomal RNA |

1252831 | 1252950 | + | 120 | 153946813 | YpsIP31758_4218 | - | 5S ribosomal RNA |

1253073 | 1253151 | + | 79 | 153946813 | YpsIP31758_4219 | - | 06 Asp tRNA
|

1260509 | 1260587 | + | 79 | 153946813 | YpsIP31758_4220 | - | 06 Asp tRNA
|

1353391 | 1353555 | - | 165 | 153946813 | YpsIP31758_4309 | - | tke1 RNA |

1418759 | 1418844 | - | 86 | 153946813 | YpsIP31758_4311 | - | RyeE RNA |

1550997 | 1551074 | - | 78 | 153946813 | YpsIP31758_4221 | - | 02 Ala tRNA
|

1551150 | 1551227 | - | 78 | 153946813 | YpsIP31758_4222 | - | 02 Ala tRNA
|

1553148 | 1553223 | + | 76 | 153946813 | YpsIP31758_4223 | - | 13 Val tRNA
|

1553260 | 1553335 | + | 76 | 153946813 | YpsIP31758_4224 | - | 13 Val tRNA
|

1553379 | 1553456 | + | 78 | 153946813 | YpsIP31758_4225 | - | 13 Val tRNA
|

1553654 | 1553731 | + | 78 | 153946813 | YpsIP31758_4226 | - | 10 Lys tRNA
|

1622954 | 1623028 | + | 75 | 153946813 | YpsIP31758_4227 | - | 11 Arg tRNA
|

2008789 | 2008897 | - | 109 | 153946813 | YpsIP31758_4312 | - | rprA RNA |

2025240 | 2025318 | - | 79 | 153946813 | YpsIP31758_4228 | - | 13 Val tRNA
|

2025467 | 2025545 | - | 79 | 153946813 | YpsIP31758_4229 | - | 13 Val tRNA
|

2025603 | 2025681 | - | 79 | 153946813 | YpsIP31758_4230 | - | 13 Val tRNA
|

2063571 | 2063671 | + | 101 | 153946813 | YpsIP31758_4313 | - | RyhB RNA |

2275524 | 2275610 | + | 87 | 153946813 | YpsIP31758_4231 | - | 18 Tyr tRNA
|

2275674 | 2275760 | + | 87 | 153946813 | YpsIP31758_4232 | - | 18 Tyr tRNA
|

2366861 | 2366952 | + | 92 | 153946813 | YpsIP31758_4233 | - | 08 Ser tRNA
|

2374510 | 2374601 | + | 92 | 153946813 | YpsIP31758_4234 | - | 08 Ser tRNA
|

2494338 | 2494415 | + | 78 | 153946813 | YpsIP31758_4235 | - | 07 Asn tRNA
|

2557109 | 2557194 | - | 86 | 153946813 | YpsIP31758_4236 | - | 15 Leu tRNA
|

2557204 | 2557279 | - | 76 | 153946813 | YpsIP31758_4237 | - | 19 Cys tRNA
|

2557331 | 2557406 | - | 76 | 153946813 | YpsIP31758_4238 | - | 01 Gly tRNA
|

2563856 | 2563933 | - | 78 | 153946813 | YpsIP31758_4239 | - | 10 Lys tRNA
|

2639150 | 2639399 | + | 250 | 153946813 | YpsIP31758_4314 | - | sraC/ryeA RNA |

2639187 | 2639288 | - | 102 | 153946813 | YpsIP31758_4315 | - | RyeB RNA |

2693239 | 2693316 | + | 78 | 153946813 | YpsIP31758_4240 | - | 07 Asn tRNA
|

2704257 | 2704334 | + | 78 | 153946813 | YpsIP31758_4241 | - | 07 Asn tRNA
|

2861232 | 2861321 | - | 90 | 153946813 | YpsIP31758_4242 | - | 08 Ser tRNA
|

2873877 | 2873946 | + | 70 | 153946813 | YpsIP31758_4316 | - | RNA-OUT |

3004582 | 3004662 | + | 81 | 153946813 | YpsIP31758_4317 | - | rybB RNA |

3079302 | 3079380 | + | 79 | 153946813 | YpsIP31758_4243 | - | 03 Pro tRNA
|

3111104 | 3111179 | - | 76 | 153946813 | YpsIP31758_4244 | - | 12 Thr tRNA
|

3111184 | 3111273 | - | 90 | 153946813 | YpsIP31758_4245 | - | 08 Ser tRNA
|

3114232 | 3114318 | + | 87 | 153946813 | YpsIP31758_4318 | - | micF RNA |

3235183 | 3235253 | - | 71 | 153946813 | YpsIP31758_4246 | - | |

3235350 | 3235420 | - | 71 | 153946813 | YpsIP31758_4247 | - | 10 Lys tRNA
|

3235517 | 3235587 | - | 71 | 153946813 | YpsIP31758_4248 | - | 10 Lys tRNA
|

3235684 | 3235754 | - | 71 | 153946813 | YpsIP31758_4249 | - | |

3235782 | 3235857 | - | 76 | 153946813 | YpsIP31758_4250 | - | 10 Lys tRNA
|

3235885 | 3235960 | - | 76 | 153946813 | YpsIP31758_4251 | - | 10 Lys tRNA
|

3235988 | 3236063 | - | 76 | 153946813 | YpsIP31758_4252 | - | 10 Lys tRNA
|

3236090 | 3236167 | - | 78 | 153946813 | YpsIP31758_4253 | - | 10 Lys tRNA
|

3263983 | 3264346 | + | 364 | 153946813 | YpsIP31758_4254 | - | 10Sa RNA (tmRNA) |

3286365 | 3286443 | + | 79 | 153946813 | YpsIP31758_4255 | - | 16 Met tRNA
|

3286449 | 3286535 | + | 87 | 153946813 | YpsIP31758_4256 | - | 15 Leu tRNA
|

3286564 | 3286638 | + | 75 | 153946813 | YpsIP31758_4257 | - | 05 Gln tRNA
|

3286721 | 3286797 | + | 77 | 153946813 | YpsIP31758_4258 | - | 05 Gln tRNA
|

3286828 | 3286906 | + | 79 | 153946813 | YpsIP31758_4259 | - | 16 Met tRNA
|

3286910 | 3286986 | + | 77 | 153946813 | YpsIP31758_4260 | - | 05 Gln tRNA
|

3391250 | 3391328 | - | 79 | 153946813 | YpsIP31758_4261 | - | 11 Arg tRNA
|

3409729 | 3409812 | - | 84 | 153946813 | YpsIP31758_4321 | - | sroB RNA |

3460689 | 3460788 | - | 100 | 153946813 | YpsIP31758_4322 | - | bacterial signal recognition particle RNA |

3612672 | 3612791 | - | 120 | 153946813 | YpsIP31758_4262 | - | 5S ribosomal RNA |

3612899 | 3615805 | - | 2907 | 153946813 | YpsIP31758_4263 | - | 23S ribosomal RNA |

3616023 | 3616100 | - | 78 | 153946813 | YpsIP31758_4264 | - | 02 Ala tRNA
|

3616150 | 3616228 | - | 79 | 153946813 | YpsIP31758_4265 | - | 14 Ile tRNA
|

3616318 | 3617872 | - | 1555 | 153946813 | YpsIP31758_4266 | - | 16S ribosomal RNA |

3639626 | 3639700 | + | 75 | 153946813 | YpsIP31758_4323 | - | sraD RNA |

3642656 | 3642727 | - | 72 | 153946813 | YpsIP31758_4267 | - | |

3642806 | 3642884 | - | 79 | 153946813 | YpsIP31758_4268 | - | 11 Arg tRNA
|

3642962 | 3643040 | - | 79 | 153946813 | YpsIP31758_4269 | - | 11 Arg tRNA
|

3643096 | 3643174 | - | 79 | 153946813 | YpsIP31758_4270 | - | 11 Arg tRNA
|

3643181 | 3643275 | - | 95 | 153946813 | YpsIP31758_4271 | - | 08 Ser tRNA
|

3958156 | 3958242 | + | 87 | 153946813 | YpsIP31758_4272 | - | 15 Leu tRNA
|

3958338 | 3958426 | + | 89 | 153946813 | YpsIP31758_4273 | - | 15 Leu tRNA
|

3958539 | 3958625 | + | 87 | 153946813 | YpsIP31758_4274 | - | 15 Leu tRNA
|

4000577 | 4000663 | - | 87 | 153946813 | YpsIP31758_4275 | - | 15 Leu tRNA
|

4057624 | 4057805 | + | 182 | 153946813 | YpsIP31758_4325 | - | SraG RNA |

4058035 | 4058153 | - | 119 | 153946813 | YpsIP31758_4326 | - | Ribosomal S15 leader |

4064543 | 4064619 | - | 77 | 153946813 | YpsIP31758_4276 | - | 16 Met tRNA
|

4064679 | 4064767 | - | 89 | 153946813 | YpsIP31758_4277 | - | 15 Leu tRNA
|

4126771 | 4126846 | - | 76 | 153946813 | YpsIP31758_4278 | - | 01 Gly tRNA
|

4126914 | 4126989 | - | 76 | 153946813 | YpsIP31758_4279 | - | 01 Gly tRNA
|

4127080 | 4127157 | - | 78 | 153946813 | YpsIP31758_4280 | - | 01 Gly tRNA
|

4157183 | 4157260 | + | 78 | 153946813 | YpsIP31758_4281 | - | 17 Phe tRNA
|

4323713 | 4323832 | - | 120 | 153946813 | YpsIP31758_4282 | - | 5S ribosomal RNA |

4323940 | 4326846 | - | 2907 | 153946813 | YpsIP31758_4283 | - | 23S ribosomal RNA |

4327097 | 4327174 | - | 78 | 153946813 | YpsIP31758_4284 | - | 04 Glu tRNA
|

4327298 | 4328852 | - | 1555 | 153946813 | YpsIP31758_4285 | - | 16S ribosomal RNA |

4359497 | 4359574 | - | 78 | 153946813 | YpsIP31758_4286 | - | 12 Thr tRNA
|

4359580 | 4359654 | - | 75 | 153946813 | YpsIP31758_4287 | - | 01 Gly tRNA
|

4359804 | 4359888 | - | 85 | 153946813 | YpsIP31758_4288 | - | 18 Tyr tRNA
|

4359906 | 4359983 | - | 78 | 153946813 | YpsIP31758_4289 | - | 12 Thr tRNA
|

4365284 | 4365403 | - | 120 | 153946813 | YpsIP31758_4290 | - | 5S ribosomal RNA |

4365511 | 4368417 | - | 2907 | 153946813 | YpsIP31758_4291 | - | 23S ribosomal RNA |

4368635 | 4368712 | - | 78 | 153946813 | YpsIP31758_4292 | - | 02 Ala tRNA
|

4368762 | 4368840 | - | 79 | 153946813 | YpsIP31758_4293 | - | 14 Ile tRNA
|

4368930 | 4370484 | - | 1555 | 153946813 | YpsIP31758_4294 | - | 16S ribosomal RNA |

4530557 | 4530660 | - | 104 | 153946813 | YpsIP31758_4329 | - | RyhB RNA |

4597616 | 4597694 | - | 79 | 153946813 | YpsIP31758_4295 | - | 03 Pro tRNA
|

4621124 | 4621218 | - | 95 | 153946813 | YpsIP31758_4296 | - | Sec tRNA |