Материалы:NC 007005

```
LOCUS NC_007005 6093698 bp DNA circular BCT 17-AUG-2006
DEFINITION Pseudomonas syringae pv. syringae B728a, complete genome.
ACCESSION NC_007005
VERSION NC_007005.1 GI:66043271
KEYWORDS .
SOURCE Pseudomonas syringae pv. syringae B728a
ORGANISM Pseudomonas syringae pv. syringae B728a
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6093698)
AUTHORS Feil,H., Feil,W.S., Chain,P., Larimer,F., Dibartolo,G.,
Copeland,A., Lykidis,A., Trong,S., Nolan,M., Goltsman,E., Thiel,J.,
Malfatti,S., Loper,J.E., Lapidus,A., Detter,J.C., Land,M.,
Richardson,P.M., Kyrpides,N.C., Ivanova,N. and Lindow,S.E.
CONSRTM DOE Joint Genome Institute
TITLE Comparison of the complete genome sequences of Pseudomonas syringae
pv. syringae B728a and pv. tomato DC3000
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 102 (31), 11064-11069 (2005)
PUBMED 16043691
REFERENCE 2 (bases 1 to 6093698)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2005) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 6093698)
AUTHORS Feil,H., Feil,W.S. and Lindow,S.E.
TITLE Direct Submission
JOURNAL Submitted (05-MAY-2005) Departments of Plant and Microbial Biology,
University of California, Berkeley, CA 94720, USA
REFERENCE 4 (bases 1 to 6093698)
AUTHORS Loper,J.
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2005) Oregon State University, OR 97331, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000075.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

103774 | 103850 | + | 77 | 66043271 | Psyr_RNA1 | - | 11 Arg tRNA
|

659379 | 659465 | - | 87 | 66043271 | Psyr_RNA2 | - | 15 Leu tRNA
|

659626 | 659712 | - | 87 | 66043271 | Psyr_RNA3 | - | 15 Leu tRNA
|

772096 | 773633 | + | 1538 | 66043271 | Psyr_RNA4 | - | 16S ribosomal RNA |

773757 | 773833 | + | 77 | 66043271 | Psyr_RNA5 | - | 14 Ile tRNA
|

773864 | 773939 | + | 76 | 66043271 | Psyr_RNA6 | - | 02 Ala tRNA
|

774183 | 777085 | + | 2903 | 66043271 | Psyr_RNA7 | - | 23S ribosomal RNA |

777230 | 777344 | + | 115 | 66043271 | Psyr_RNA8 | - | 5S ribosomal RNA |

835185 | 835260 | + | 76 | 66043271 | Psyr_RNA9 | - | 07 Asn tRNA
|

835290 | 835366 | + | 77 | 66043271 | Psyr_RNA10 | - | 03 Pro tRNA
|

835372 | 835447 | + | 76 | 66043271 | Psyr_RNA11 | - | 10 Lys tRNA
|

835543 | 835619 | + | 77 | 66043271 | Psyr_RNA12 | - | 03 Pro tRNA
|

964686 | 966223 | + | 1538 | 66043271 | Psyr_RNA13 | - | 16S ribosomal RNA |

966347 | 966423 | + | 77 | 66043271 | Psyr_RNA14 | - | 14 Ile tRNA
|

966454 | 966529 | + | 76 | 66043271 | Psyr_RNA15 | - | 02 Ala tRNA
|

966773 | 969675 | + | 2903 | 66043271 | Psyr_RNA16 | - | 23S ribosomal RNA |

969825 | 969939 | + | 115 | 66043271 | Psyr_RNA17 | - | 5S ribosomal RNA |

1034590 | 1034666 | - | 77 | 66043271 | Psyr_RNA18 | - | 16 Met tRNA
|

1080088 | 1080162 | - | 75 | 66043271 | Psyr_RNA19 | - | 05 Gln tRNA
|

1385152 | 1385236 | - | 85 | 66043271 | Psyr_RNA20 | - | 15 Leu tRNA
|

1581982 | 1582058 | - | 77 | 66043271 | Psyr_RNA21 | - | 16 Met tRNA
|

1582264 | 1582340 | - | 77 | 66043271 | Psyr_RNA22 | - | 16 Met tRNA
|

1604319 | 1604394 | + | 76 | 66043271 | Psyr_RNA23 | - | 10 Lys tRNA
|

1604490 | 1604566 | + | 77 | 66043271 | Psyr_RNA24 | - | 03 Pro tRNA
|

1744950 | 1745039 | + | 90 | 66043271 | Psyr_RNA25 | - | 08 Ser tRNA
|

1788216 | 1788291 | + | 76 | 66043271 | Psyr_RNA26 | - | 13 Val tRNA
|

1788313 | 1788389 | + | 77 | 66043271 | Psyr_RNA27 | - | 06 Asp tRNA
|

1876161 | 1876236 | + | 76 | 66043271 | Psyr_RNA28 | - | 13 Val tRNA
|

1876316 | 1876392 | + | 77 | 66043271 | Psyr_RNA29 | - | 06 Asp tRNA
|

1876508 | 1876584 | + | 77 | 66043271 | Psyr_RNA30 | - | 06 Asp tRNA
|

1981361 | 1981437 | + | 77 | 66043271 | Psyr_RNA31 | - | 11 Arg tRNA
|

1981489 | 1981564 | + | 76 | 66043271 | Psyr_RNA32 | - | 09 His tRNA
|

1981621 | 1981705 | + | 85 | 66043271 | Psyr_RNA33 | - | 15 Leu tRNA
|

2101602 | 2101718 | + | 117 | 66043271 | Psyr_RNA34 | - | SRP RNA; RNA component of signal recognition particle |

2161907 | 2161996 | - | 90 | 66043271 | Psyr_RNA35 | - | 08 Ser tRNA
|

2296343 | 2296418 | + | 76 | 66043271 | Psyr_RNA36 | - | 02 Ala tRNA
|

2296507 | 2296582 | + | 76 | 66043271 | Psyr_RNA37 | - | 04 Glu tRNA
|

2296634 | 2296709 | + | 76 | 66043271 | Psyr_RNA38 | - | 02 Ala tRNA
|

2296756 | 2296831 | + | 76 | 66043271 | Psyr_RNA39 | - | 04 Glu tRNA
|

2523108 | 2523184 | + | 77 | 66043271 | Psyr_RNA40 | - | 03 Pro tRNA
|

2809115 | 2809191 | + | 77 | 66043271 | Psyr_RNA41 | - | 13 Val tRNA
|

2810905 | 2810981 | + | 77 | 66043271 | Psyr_RNA42 | - | 13 Val tRNA
|

3348041 | 3348126 | + | 86 | 66043271 | Psyr_RNA43 | - | 15 Leu tRNA
|

3433363 | 3433436 | - | 74 | 66043271 | Psyr_RNA44 | - | 19 Cys tRNA
|

3473750 | 3473825 | - | 76 | 66043271 | Psyr_RNA45 | - | 01 Gly tRNA
|

3706447 | 3706522 | - | 76 | 66043271 | Psyr_RNA46 | - | 07 Asn tRNA
|

3793910 | 3793997 | + | 88 | 66043271 | Psyr_RNA47 | - | 08 Ser tRNA
|

3847440 | 3847554 | - | 115 | 66043271 | Psyr_RNA48 | - | 5S ribosomal RNA |

3847704 | 3850606 | - | 2903 | 66043271 | Psyr_RNA49 | - | 23S ribosomal RNA |

3850850 | 3850925 | - | 76 | 66043271 | Psyr_RNA50 | - | 02 Ala tRNA
|

3850980 | 3851056 | - | 77 | 66043271 | Psyr_RNA51 | - | 14 Ile tRNA
|

3851140 | 3852677 | - | 1538 | 66043271 | Psyr_RNA52 | - | 16S ribosomal RNA |

4228815 | 4228891 | - | 77 | 66043271 | Psyr_RNA53 | - | 11 Arg tRNA
|

4232917 | 4232993 | - | 77 | 66043271 | Psyr_RNA54 | - | 11 Arg tRNA
|

4233081 | 4233157 | - | 77 | 66043271 | Psyr_RNA55 | - | 11 Arg tRNA
|

4233267 | 4233357 | - | 91 | 66043271 | Psyr_RNA56 | - | 08 Ser tRNA
|

4292445 | 4292520 | - | 76 | 66043271 | Psyr_RNA57 | - | 01 Gly tRNA
|

4292525 | 4292600 | - | 76 | 66043271 | Psyr_RNA58 | - | 04 Glu tRNA
|

4292701 | 4292776 | - | 76 | 66043271 | Psyr_RNA59 | - | 01 Gly tRNA
|

4292779 | 4292854 | - | 76 | 66043271 | Psyr_RNA60 | - | 04 Glu tRNA
|

4736047 | 4736120 | + | 74 | 66043271 | Psyr_RNA61 | - | 01 Gly tRNA
|

4902201 | 4902492 | - | 292 | 66043271 | Psyr_RNA62 | - | RNA component of RNaseP |

4976249 | 4976325 | - | 77 | 66043271 | Psyr_RNA63 | - | 16 Met tRNA
|

4976421 | 4976506 | - | 86 | 66043271 | Psyr_RNA64 | - | 15 Leu tRNA
|

4999820 | 5000211 | + | 392 | 66043271 | Psyr_RNA65 | - | tmRNA |

5420075 | 5420150 | - | 76 | 66043271 | Psyr_RNA66 | - | 20 Trp tRNA
|

5420316 | 5420391 | - | 76 | 66043271 | Psyr_RNA67 | - | 12 Thr tRNA
|

5420418 | 5420491 | - | 74 | 66043271 | Psyr_RNA68 | - | 01 Gly tRNA
|

5420516 | 5420600 | - | 85 | 66043271 | Psyr_RNA69 | - | 18 Tyr tRNA
|

5423027 | 5423141 | - | 115 | 66043271 | Psyr_RNA70 | - | 5S ribosomal RNA |

5423291 | 5426193 | - | 2903 | 66043271 | Psyr_RNA71 | - | 23S ribosomal RNA |

5426437 | 5426512 | - | 76 | 66043271 | Psyr_RNA72 | - | 02 Ala tRNA
|

5426567 | 5426643 | - | 77 | 66043271 | Psyr_RNA73 | - | 14 Ile tRNA
|

5426727 | 5428264 | - | 1538 | 66043271 | Psyr_RNA74 | - | 16S ribosomal RNA |

5506840 | 5506916 | + | 77 | 66043271 | Psyr_RNA75 | - | 16 Met tRNA
|

5816375 | 5816450 | + | 76 | 66043271 | Psyr_RNA76 | - | 17 Phe tRNA
|

5830736 | 5830811 | + | 76 | 66043271 | Psyr_RNA77 | - | 12 Thr tRNA
|

5947731 | 5947845 | - | 115 | 66043271 | Psyr_RNA78 | - | 5S ribosomal RNA |

5947954 | 5948068 | - | 115 | 66043271 | Psyr_RNA79 | - | 5S ribosomal RNA |

5948213 | 5951115 | - | 2903 | 66043271 | Psyr_RNA80 | - | 23S ribosomal RNA |

5951359 | 5951434 | - | 76 | 66043271 | Psyr_RNA81 | - | 02 Ala tRNA
|

5951489 | 5951565 | - | 77 | 66043271 | Psyr_RNA82 | - | 14 Ile tRNA
|

5951649 | 5953186 | - | 1538 | 66043271 | Psyr_RNA83 | - | 16S ribosomal RNA |