Материалы:NC 006582

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LOCUS NC_006582 4303871 bp DNA circular BCT 02-DEC-2005
DEFINITION Bacillus clausii KSM-K16, complete genome.
ACCESSION NC_006582
VERSION NC_006582.1 GI:56961782
KEYWORDS .
SOURCE Bacillus clausii KSM-K16
ORGANISM Bacillus clausii KSM-K16
Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
REFERENCE 1
AUTHORS Shirai,T., Suzuki,A., Yamane,T., Ashida,T., Kobayashi,T., Hitomi,J.
and Ito,S.
TITLE High-resolution crystal structure of M-protease: phylogeny aided
analysis of the high-alkaline adaptation mechanism
JOURNAL Protein Eng. 10 (6), 627-634 (1997)
PUBMED 9278275
REFERENCE 2
AUTHORS Kobayashi,T., Hakamada,Y., Adachi,S., Hitomi,J., Yoshimatsu,T.,
Koike,K., Kawai,S. and Ito,S.
TITLE Purification and properties of an alkaline protease from
alkalophilic Bacillus sp. KSM-K16
JOURNAL Appl. Microbiol. Biotechnol. 43 (3), 473-481 (1995)
PUBMED 7632397
REFERENCE 3
AUTHORS Hakamada,Y., Kobayashi,T., Hitomi,J., Kawai,S. and Ito,S.
TITLE Molecular cloning and nucleotide sequence of the gene for an
alkaline protease from the alkalophilic Bacillus sp. KSM-K16
JOURNAL J. Ferment. Bioeng. 78, 105-108 (1994)
REFERENCE 4
AUTHORS Takaki,Y., Kageyama,Y., Shimamura,S., Suzuki,H., Nishi,S.,
Hatada,Y., Kawai,S., Ito,S. and Horikoshi,K.
TITLE The complete genome sequence of the alkaliphilic Bacillus clausii
KSM-K16
JOURNAL Unpublished
REFERENCE 5 (bases 1 to 4303871)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2005) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 6 (bases 1 to 4303871)
AUTHORS Takaki,Y., Kageyama,Y., Shimamura,S., Suzuki,H., Nishi,S.,
Hatada,Y., Kawai,S., Ito,S. and Horikoshi,K.
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2003) Biological Science Laboratories, Kao
Corporation, 2606 Akabane, Ichikai-machi, Haga-gun, Tochigi
321-3497,, Japan
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AP006627.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

11675 | 13227 | + | 1553 | 56961782 | ABCr01 | - | ribosomal RNA-16S |

13559 | 16361 | + | 2803 | 56961782 | ABCr02 | - | ribosomal RNA-23S |

16733 | 16848 | + | 116 | 56961782 | ABCr03 | - | ribosomal RNA-5S |

52364 | 53916 | + | 1553 | 56961782 | ABCr04 | - | ribosomal RNA-16S |

54372 | 57174 | + | 2803 | 56961782 | ABCr05 | - | ribosomal RNA-23S |

57448 | 57563 | + | 116 | 56961782 | ABCr06 | - | ribosomal RNA-5S |

115582 | 115655 | + | 74 | 56961782 | ABCt01 | - | 16 Met tRNA
|

136407 | 137957 | + | 1551 | 56961782 | ABCr07 | - | ribosomal RNA-16S |

138412 | 141215 | + | 2804 | 56961782 | ABCr08 | - | ribosomal RNA-23S |

141700 | 141815 | + | 116 | 56961782 | ABCr09 | - | ribosomal RNA-5S |

141833 | 141908 | + | 76 | 56961782 | ABCt02 | - | 13 Val tRNA
|

142043 | 142118 | + | 76 | 56961782 | ABCt03 | - | 12 Thr tRNA
|

142137 | 142212 | + | 76 | 56961782 | ABCt04 | - | 10 Lys tRNA
|

142225 | 142307 | + | 83 | 56961782 | ABCt05 | - | 15 Leu tRNA
|

142327 | 142398 | + | 72 | 56961782 | ABCt06 | - | 01 Gly tRNA
|

142418 | 142503 | + | 86 | 56961782 | ABCt07 | - | 15 Leu tRNA
|

142523 | 142599 | + | 77 | 56961782 | ABCt08 | - | 11 Arg tRNA
|

142604 | 142680 | + | 77 | 56961782 | ABCt09 | - | 03 Pro tRNA
|

142688 | 142763 | + | 76 | 56961782 | ABCt10 | - | 02 Ala tRNA
|

142939 | 144489 | + | 1551 | 56961782 | ABCr10 | - | ribosomal RNA-16S |

144821 | 147624 | + | 2804 | 56961782 | ABCr11 | - | ribosomal RNA-23S |

148117 | 148232 | + | 116 | 56961782 | ABCr12 | - | ribosomal RNA-5S |

218075 | 219625 | + | 1551 | 56961782 | ABCr13 | - | ribosomal RNA-16S |

220080 | 222882 | + | 2803 | 56961782 | ABCr14 | - | ribosomal RNA-23S |

223378 | 223493 | + | 116 | 56961782 | ABCr15 | - | ribosomal RNA-5S |

223516 | 223590 | + | 75 | 56961782 | ABCt11 | - | 07 Asn tRNA
|

223598 | 223670 | + | 73 | 56961782 | ABCt12 | - | 12 Thr tRNA
|

263085 | 263156 | + | 72 | 56961782 | ABCt13 | - | 04 Glu tRNA
|

263229 | 263340 | + | 112 | 56961782 | ABCr16 | - | ribosomal RNA-5S |

263454 | 263529 | + | 76 | 56961782 | ABCt14 | - | 13 Val tRNA
|

263553 | 263637 | + | 85 | 56961782 | ABCt15 | - | 18 Tyr tRNA
|

263650 | 263724 | + | 75 | 56961782 | ABCt16 | - | 05 Gln tRNA
|

263728 | 263800 | + | 73 | 56961782 | ABCt17 | - | 10 Lys tRNA
|

263849 | 263924 | + | 76 | 56961782 | ABCt18 | - | 02 Ala tRNA
|

890651 | 890725 | + | 75 | 56961782 | ABCt19 | - | 07 Asn tRNA
|

890727 | 890814 | + | 88 | 56961782 | ABCt20 | - | 08 Ser tRNA
|

890822 | 890893 | + | 72 | 56961782 | ABCt21 | - | 04 Glu tRNA
|

891276 | 891351 | + | 76 | 56961782 | ABCt22 | - | 13 Val tRNA
|

891359 | 891435 | + | 77 | 56961782 | ABCt23 | - | 06 Asp tRNA
|

891461 | 891546 | + | 86 | 56961782 | ABCt24 | - | 15 Leu tRNA
|

891553 | 891637 | + | 85 | 56961782 | ABCt25 | - | 15 Leu tRNA
|

932932 | 933008 | + | 77 | 56961782 | ABCt26 | - | 11 Arg tRNA
|

933012 | 933088 | + | 77 | 56961782 | ABCt27 | - | 03 Pro tRNA
|

933276 | 933349 | + | 74 | 56961782 | ABCt28 | - | 01 Gly tRNA
|

933381 | 933457 | + | 77 | 56961782 | ABCt29 | - | 14 Ile tRNA
|

933638 | 935188 | + | 1551 | 56961782 | ABCr17 | - | ribosomal RNA-16S |

935504 | 935580 | + | 77 | 56961782 | ABCt30 | - | 14 Ile tRNA
|

935596 | 935671 | + | 76 | 56961782 | ABCt31 | - | 02 Ala tRNA
|

935921 | 938723 | + | 2803 | 56961782 | ABCr18 | - | ribosomal RNA-23S |

939096 | 939211 | + | 116 | 56961782 | ABCr19 | - | ribosomal RNA-5S |

943808 | 943881 | + | 74 | 56961782 | ABCt32 | - | 16 Met tRNA
|

1440581 | 1442131 | + | 1551 | 56961782 | ABCr20 | - | ribosomal RNA-16S |

1442780 | 1445583 | + | 2804 | 56961782 | ABCr21 | - | ribosomal RNA-23S |

1446077 | 1446192 | + | 116 | 56961782 | ABCr22 | - | ribosomal RNA-5S |

1446204 | 1446278 | + | 75 | 56961782 | ABCt33 | - | 07 Asn tRNA
|

1446282 | 1446375 | + | 94 | 56961782 | ABCt34 | - | 08 Ser tRNA
|

1446388 | 1446462 | + | 75 | 56961782 | ABCt35 | - | 04 Glu tRNA
|

1446499 | 1446574 | + | 76 | 56961782 | ABCt36 | - | 13 Val tRNA
|

1447011 | 1447087 | + | 77 | 56961782 | ABCt37 | - | 16 Met tRNA
|

1447105 | 1447181 | + | 77 | 56961782 | ABCt38 | - | 06 Asp tRNA
|

1447194 | 1447269 | + | 76 | 56961782 | ABCt39 | - | 17 Phe tRNA
|

1447283 | 1447358 | + | 76 | 56961782 | ABCt40 | - | 12 Thr tRNA
|

1447423 | 1447507 | + | 85 | 56961782 | ABCt41 | - | 18 Tyr tRNA
|

1447515 | 1447588 | + | 74 | 56961782 | ABCt42 | - | 20 Trp tRNA
|

1447619 | 1447695 | + | 77 | 56961782 | ABCt43 | - | 09 His tRNA
|

1447708 | 1447781 | + | 74 | 56961782 | ABCt44 | - | 05 Gln tRNA
|

1447785 | 1447856 | + | 72 | 56961782 | ABCt45 | - | 01 Gly tRNA
|

1447868 | 1447941 | + | 74 | 56961782 | ABCt46 | - | 19 Cys tRNA
|

1447971 | 1448056 | + | 86 | 56961782 | ABCt47 | - | 15 Leu tRNA
|

1448083 | 1448156 | + | 74 | 56961782 | ABCt48 | - | 11 Arg tRNA
|

1450811 | 1450892 | + | 82 | 56961782 | ABCt49 | - | 15 Leu tRNA
|

1841973 | 1842047 | + | 75 | 56961782 | ABCt50 | - | 07 Asn tRNA
|

1842050 | 1842126 | + | 77 | 56961782 | ABCt51 | - | 16 Met tRNA
|

1842157 | 1842232 | + | 76 | 56961782 | ABCt52 | - | 09 His tRNA
|

1842250 | 1842323 | + | 74 | 56961782 | ABCt53 | - | 16 Met tRNA
|

1842328 | 1842417 | + | 90 | 56961782 | ABCt54 | - | 08 Ser tRNA
|

2571148 | 2571220 | - | 73 | 56961782 | ABCt55 | - | 13 Val tRNA
|

2573822 | 2573894 | - | 73 | 56961782 | ABCt56 | - | 11 Arg tRNA
|

2626662 | 2626745 | - | 84 | 56961782 | ABCt57 | - | 15 Leu tRNA
|

2626772 | 2626862 | - | 91 | 56961782 | ABCt58 | - | 08 Ser tRNA
|

2626894 | 2626970 | - | 77 | 56961782 | ABCt59 | - | 14 Ile tRNA
|

2626986 | 2627056 | - | 71 | 56961782 | ABCt60 | - | 01 Gly tRNA
|

2627239 | 2627310 | - | 72 | 56961782 | ABCt61 | - | 01 Gly tRNA
|

2627314 | 2627388 | - | 75 | 56961782 | ABCt62 | - | 05 Gln tRNA
|

2627394 | 2627470 | - | 77 | 56961782 | ABCt63 | - | 16 Met tRNA
|

2627752 | 2627844 | - | 93 | 56961782 | ABCt64 | - | 08 Ser tRNA
|

2627852 | 2627924 | - | 73 | 56961782 | ABCt65 | - | 02 Ala tRNA
|

2781202 | 2781278 | - | 77 | 56961782 | ABCt66 | - | 11 Arg tRNA
|

2781284 | 2781357 | - | 74 | 56961782 | ABCt67 | - | 01 Gly tRNA
|

3031151 | 3031223 | - | 73 | 56961782 | ABCt68 | - | 02 Ala tRNA
|

3447112 | 3447185 | + | 74 | 56961782 | ABCt69 | - | 11 Arg tRNA
|

4281481 | 4281553 | - | 73 | 56961782 | ABCt70 | - | 12 Thr tRNA
|

4281557 | 4281632 | - | 76 | 56961782 | ABCt71 | - | 17 Phe tRNA
|

4281669 | 4281745 | - | 77 | 56961782 | ABCt72 | - | 06 Asp tRNA
|

4281769 | 4281840 | - | 72 | 56961782 | ABCt73 | - | 04 Glu tRNA
|

4281851 | 4281926 | - | 76 | 56961782 | ABCt74 | - | 10 Lys tRNA
|