Материалы:NC 007644

LOCUS NC_007644 2628784 bp DNA circular BCT 24-MAY-2007 DEFINITION Moorella thermoacetica ATCC 39073, complete genome. ACCESSION NC_007644 VERSION NC_007644.1 GI:83588874 KEYWORDS . SOURCE Moorella thermoacetica ATCC 39073 ORGANISM Moorella thermoacetica ATCC 39073 Bacteria; Firmicutes; Clostridia; Thermoanaerobacteriales; Thermoanaerobacteriaceae; Moorella group; Moorella. REFERENCE 1 (bases 1 to 2628784) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chertkov,O., Saunders,E.H., Brettin,T., Bruce,D., Han,C., Tapia,R., Gilna,P., Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Anderson,I., Richardson,P. and Ragsdale,S. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Moorella thermoacetica ATCC 39073 JOURNAL Unpublished REFERENCE 2 (bases 1 to 2628784) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-DEC-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2628784) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chertkov,O., Saunders,E.H., Brettin,T., Bruce,D., Han,C., Tapia,R., Gilna,P., Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Anderson,I. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (08-DEC-2005) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000232. URL -- http://www.jgi.doe.gov Source DNA available from Stephen Ragsdale (sragsdale@unl.edu) Bacteria available from ATCC: ATCC 39073 Contacts: Stephen Ragsdale (sragsdale@unl.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

18512 | 18762 | + | 251 | 83588874 | Moth_R0001 | - | |

26136 | 26227 | + | 92 | 83588874 | Moth_R0002 | - | 08 Ser tRNA
|

26240 | 26335 | + | 96 | 83588874 | Moth_R0003 | - | 08 Ser tRNA
|

26450 | 26526 | + | 77 | 83588874 | Moth_R0004 | - | 11 Arg tRNA
|

26539 | 26615 | + | 77 | 83588874 | Moth_R0005 | - | 11 Arg tRNA
|

27077 | 27168 | + | 92 | 83588874 | Moth_R0006 | - | 08 Ser tRNA
|

28593 | 28687 | + | 95 | 83588874 | Moth_R0007 | - | 08 Ser tRNA
|

28823 | 28925 | + | 103 | 83588874 | Moth_R0008 | - | 4.5S RNA, SRP RNA |

99445 | 99521 | + | 77 | 83588874 | Moth_R0009 | - | 16 Met tRNA
|

99530 | 99604 | + | 75 | 83588874 | Moth_R0010 | - | 04 Glu tRNA
|

134847 | 134950 | - | 104 | 83588874 | Moth_R0011 | - | |

147998 | 149552 | + | 1555 | 83588874 | Moth_R0012 | - | 16S ribosomal RNA |

149668 | 149744 | + | 77 | 83588874 | Moth_R0013 | - | 14 Ile tRNA
|

149830 | 149905 | + | 76 | 83588874 | Moth_R0014 | - | 02 Ala tRNA
|

149966 | 152937 | + | 2972 | 83588874 | Moth_R0015 | - | 23S ribosomal RNA |

153004 | 153118 | + | 115 | 83588874 | Moth_R0016 | - | 5S ribosomal RNA |

153169 | 153243 | + | 75 | 83588874 | Moth_R0017 | - | 07 Asn tRNA
|

284252 | 284606 | + | 355 | 83588874 | Moth_R0018 | - | tmRNA, 10Sa RNA |

377277 | 377352 | + | 76 | 83588874 | Moth_R0019 | - | 02 Ala tRNA
|

377364 | 377438 | + | 75 | 83588874 | Moth_R0020 | - | 13 Val tRNA
|

400987 | 401094 | - | 108 | 83588874 | Moth_R0021 | - | |

409831 | 409997 | + | 167 | 83588874 | Moth_R0022 | - | |

417084 | 417159 | + | 76 | 83588874 | Moth_R0023 | - | 02 Ala tRNA
|

459162 | 459289 | + | 128 | 83588874 | Moth_R0024 | - | |

540866 | 540939 | + | 74 | 83588874 | Moth_R0025 | - | 01 Gly tRNA
|

540945 | 541021 | + | 77 | 83588874 | Moth_R0026 | - | 11 Arg tRNA
|

541034 | 541110 | + | 77 | 83588874 | Moth_R0027 | - | 09 His tRNA
|

541123 | 541198 | + | 76 | 83588874 | Moth_R0028 | - | 05 Gln tRNA
|

541206 | 541281 | + | 76 | 83588874 | Moth_R0029 | - | 10 Lys tRNA
|

541289 | 541373 | + | 85 | 83588874 | Moth_R0030 | - | 15 Leu tRNA
|

545895 | 545969 | + | 75 | 83588874 | Moth_R0031 | - | 01 Gly tRNA
|

569533 | 569640 | + | 108 | 83588874 | Moth_R0032 | - | |

649555 | 649629 | + | 75 | 83588874 | Moth_R0033 | - | 07 Asn tRNA
|

649634 | 649708 | + | 75 | 83588874 | Moth_R0034 | - | 16 Met tRNA
|

651775 | 652137 | + | 363 | 83588874 | Moth_R0035 | - | RNA component of RNaseP |

652596 | 652670 | + | 75 | 83588874 | Moth_R0036 | - | |

847282 | 847385 | + | 104 | 83588874 | Moth_R0037 | - | |

930570 | 930644 | - | 75 | 83588874 | Moth_R0038 | - | 12 Thr tRNA
|

950178 | 950293 | + | 116 | 83588874 | Moth_R0039 | - | RFN element; FMN riboswitch |

996185 | 996342 | - | 158 | 83588874 | Moth_R0040 | - | |

1093214 | 1093385 | + | 172 | 83588874 | Moth_R0041 | - | |

1116483 | 1116660 | + | 178 | 83588874 | Moth_R0042 | - | |

1152499 | 1152574 | - | 76 | 83588874 | Moth_R0043 | - | 04 Glu tRNA
|

1160077 | 1160150 | + | 74 | 83588874 | Moth_R0044 | - | 05 Gln tRNA
|

1172671 | 1172746 | + | 76 | 83588874 | Moth_R0045 | - | 20 Trp tRNA
|

1194764 | 1194839 | - | 76 | 83588874 | Moth_R0046 | - | 10 Lys tRNA
|

1194845 | 1194921 | - | 77 | 83588874 | Moth_R0047 | - | 11 Arg tRNA
|

1204832 | 1204935 | - | 104 | 83588874 | Moth_R0048 | - | |

1221972 | 1222215 | - | 244 | 83588874 | Moth_R0049 | - | |

1250938 | 1251015 | + | 78 | 83588874 | Moth_R0050 | - | 03 Pro tRNA
|

1251025 | 1251100 | + | 76 | 83588874 | Moth_R0051 | - | 12 Thr tRNA
|

1265031 | 1265132 | - | 102 | 83588874 | Moth_R0052 | - | |

1272647 | 1272748 | - | 102 | 83588874 | Moth_R0053 | - | |

1278513 | 1278600 | - | 88 | 83588874 | Moth_R0054 | - | 15 Leu tRNA
|

1324983 | 1325060 | - | 78 | 83588874 | Moth_R0055 | - | 03 Pro tRNA
|

1354167 | 1354284 | - | 118 | 83588874 | Moth_R0056 | - | |

1390416 | 1390600 | + | 185 | 83588874 | Moth_R0057 | - | |

1412184 | 1412323 | + | 140 | 83588874 | Moth_R0058 | - | |

1448657 | 1448759 | + | 103 | 83588874 | Moth_R0059 | - | |

1696140 | 1696239 | + | 100 | 83588874 | Moth_R0060 | - | |

1741459 | 1741649 | + | 191 | 83588874 | Moth_R0061 | - | |

1814276 | 1814512 | - | 237 | 83588874 | Moth_R0062 | - | |

1816334 | 1816408 | - | 75 | 83588874 | Moth_R0063 | - | 13 Val tRNA
|

1849506 | 1849580 | + | 75 | 83588874 | Moth_R0064 | - | 01 Gly tRNA
|

1849593 | 1849668 | + | 76 | 83588874 | Moth_R0065 | - | 19 Cys tRNA
|

1850397 | 1850485 | + | 89 | 83588874 | Moth_R0066 | - | 15 Leu tRNA
|

1874189 | 1874264 | - | 76 | 83588874 | Moth_R0067 | - | 17 Phe tRNA
|

1874270 | 1874346 | - | 77 | 83588874 | Moth_R0068 | - | 06 Asp tRNA
|

1874352 | 1874426 | - | 75 | 83588874 | Moth_R0069 | - | 13 Val tRNA
|

1893467 | 1893551 | - | 85 | 83588874 | Moth_R0070 | - | 15 Leu tRNA
|

1902042 | 1902128 | + | 87 | 83588874 | Moth_R0071 | - | 15 Leu tRNA
|

1943069 | 1943146 | + | 78 | 83588874 | Moth_R0072 | - | 03 Pro tRNA
|

2020095 | 2020247 | - | 153 | 83588874 | Moth_R0073 | - | |

2020248 | 2020351 | - | 104 | 83588874 | Moth_R0074 | - | |

2031807 | 2031907 | - | 101 | 83588874 | Moth_R0075 | - | |

2040916 | 2041016 | - | 101 | 83588874 | Moth_R0076 | - | |

2070462 | 2070570 | + | 109 | 83588874 | Moth_R0077 | - | |

2145827 | 2145928 | - | 102 | 83588874 | Moth_R0078 | - | |

2145914 | 2146017 | - | 104 | 83588874 | Moth_R0079 | - | |

2197504 | 2197633 | + | 130 | 83588874 | Moth_R0080 | - | |

2328508 | 2328581 | + | 74 | 83588874 | Moth_R0081 | - | |

2349172 | 2349367 | - | 196 | 83588874 | Moth_R0082 | - | |

2419169 | 2419243 | - | 75 | 83588874 | Moth_R0083 | - | 01 Gly tRNA
|

2419550 | 2419625 | + | 76 | 83588874 | Moth_R0084 | - | 10 Lys tRNA
|

2419633 | 2419707 | + | 75 | 83588874 | Moth_R0085 | - | 04 Glu tRNA
|

2419713 | 2419789 | + | 77 | 83588874 | Moth_R0086 | - | 06 Asp tRNA
|

2533880 | 2534177 | - | 298 | 83588874 | Moth_R0087 | - | |

2586313 | 2586388 | - | 76 | 83588874 | Moth_R0088 | - | 12 Thr tRNA
|

2586390 | 2586465 | - | 76 | 83588874 | Moth_R0089 | - | 16 Met tRNA
|

2586482 | 2586567 | - | 86 | 83588874 | Moth_R0090 | - | 18 Tyr tRNA
|

2591948 | 2592205 | - | 258 | 83588874 | Moth_R0091 | - | |

2603151 | 2603246 | - | 96 | 83588874 | Moth_R0092 | - | Sec tRNA |