Материалы:NC 007493

LOCUS NC_007493 3188609 bp DNA circular BCT 20-APR-2007 DEFINITION Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence. ACCESSION NC_007493 VERSION NC_007493.1 GI:77461965 KEYWORDS . SOURCE Rhodobacter sphaeroides 2.4.1 ORGANISM Rhodobacter sphaeroides 2.4.1 Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter. REFERENCE 1 (bases 1 to 3188609) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Richardson,P., Mackenzie,C., Choudhary,M., Larimer,F., Hauser,L.J., Land,M., Donohue,T.J. and Kaplan,S. CONSRTM The Rhodobacter sphaeroides Genome Consortium TITLE Complete Sequence of Chromosome 1 of Rhodobacter sphaeroides 2.4.1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3188609) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (11-OCT-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3188609) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Richardson,P., Mackenzie,C., Choudhary,M., Larimer,F., Hauser,L.J., Land,M., Donohue,T.J. and Kaplan,S. CONSRTM The Rhodobacter sphaeroides Genome Consortium TITLE Direct Submission JOURNAL Submitted (07-SEP-2005) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000143. URL -- http://www.jgi.doe.gov http://www.rhodobacter.org Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Samuel Kaplan (Samuel.Kaplan@uth.tmc.edu) Ronald C. Mackenzie (Ronald.C.Mackenzie@uth.tmc.edu) Group Alias sphaeroides@uth.tmc.edu Draft sequencing done at US DOE Joint Genome Institute Closure and finishing done at The Department of Microbiology and Molecular Genetics, University of Texas-Houson Health Science Center, 6431 Fannin St. Houston, TX 77030-1501, USA Source DNA and bacteria available from Chris Mackenzie (Ronald.C.Mackenzie@uth.tmc.edu) and Samuel Kaplan (Samuel.Kaplan@uth.tmc.edu) The Rhodobacter sphaeroides 2.4.1 strain used in this project was submitted to the American Type Culture Collection and has been given the identifier ATCC BAA-808. COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

1 | 1464 | + | 1464 | 77461965 | RSP_4294 | - | 16S ribosomal RNA |

1686 | 1762 | + | 77 | 77461965 | RSP_4324 | - | 14 Ile tRNA
|

1810 | 1885 | + | 76 | 77461965 | RSP_4325 | - | 02 Ala tRNA
|

2130 | 5012 | + | 2883 | 77461965 | RSP_4295 | - | 23S ribosomal RNA |

5112 | 5226 | + | 115 | 77461965 | RSP_4293 | - | 5S ribosomal RNA |

5272 | 5348 | + | 77 | 77461965 | RSP_4307 | - | 16 Met tRNA
|

92706 | 92781 | - | 76 | 77461965 | RSP_4318 | - | 12 Thr tRNA
|

215732 | 215821 | - | 90 | 77461965 | RSP_4302 | - | 08 Ser tRNA
|

255196 | 255271 | - | 76 | 77461965 | RSP_4310 | - | 11 Arg tRNA
|

289879 | 289954 | + | 76 | 77461965 | RSP_4298 | - | 20 Trp tRNA
|

479857 | 479943 | + | 87 | 77461965 | RSP_4338 | - | 15 Leu tRNA
|

512637 | 512720 | + | 84 | 77461965 | RSP_4301 | - | 15 Leu tRNA
|

560555 | 560630 | - | 76 | 77461965 | RSP_4315 | - | 16 Met tRNA
|

675421 | 675497 | - | 77 | 77461965 | RSP_4297 | - | 11 Arg tRNA
|

683851 | 683925 | - | 75 | 77461965 | RSP_4344 | - | 01 Gly tRNA
|

740867 | 741183 | - | 317 | 77461965 | RSP_4341 | - | tmRNA, 10Sa RNA |

766852 | 766926 | + | 75 | 77461965 | RSP_4345 | - | 04 Glu tRNA
|

857015 | 857098 | - | 84 | 77461965 | RSP_4340 | - | 18 Tyr tRNA
|

890768 | 891120 | + | 353 | 77461965 | RSP_4342 | - | RNA component of RNase P |

972793 | 972869 | + | 77 | 77461965 | RSP_4313 | - | 03 Pro tRNA
|

1251312 | 1251389 | - | 78 | 77461965 | RSP_4331 | - | 03 Pro tRNA
|

1413287 | 1413360 | - | 74 | 77461965 | RSP_4305 | - | 01 Gly tRNA
|

1479346 | 1479420 | + | 75 | 77461965 | RSP_4327 | - | 05 Gln tRNA
|

1479511 | 1479585 | + | 75 | 77461965 | RSP_4346 | - | 05 Gln tRNA
|

1508343 | 1508417 | - | 75 | 77461965 | RSP_4328 | - | 13 Val tRNA
|

1609145 | 1609228 | - | 84 | 77461965 | RSP_4326 | - | 15 Leu tRNA
|

1678919 | 1678995 | - | 77 | 77461965 | RSP_4317 | - | 06 Asp tRNA
|

1679031 | 1679107 | - | 77 | 77461965 | RSP_4316 | - | 06 Asp tRNA
|

1807746 | 1807817 | + | 72 | 77461965 | RSP_4304 | - | 12 Thr tRNA
|

1843556 | 1843630 | + | 75 | 77461965 | RSP_4296 | - | 01 Gly tRNA
|

1849076 | 1849149 | - | 74 | 77461965 | RSP_4323 | - | Xaa tRNA |

1852143 | 1852216 | - | 74 | 77461965 | RSP_4322 | - | 19 Cys tRNA
|

1857117 | 1857201 | - | 85 | 77461965 | RSP_4321 | - | 15 Leu tRNA
|

1920665 | 1920739 | + | 75 | 77461965 | RSP_4299 | - | 07 Asn tRNA
|

1931645 | 1931716 | + | 72 | 77461965 | RSP_4300 | - | 08 Ser tRNA
|

1942439 | 1942528 | - | 90 | 77461965 | RSP_4314 | - | 08 Ser tRNA
|

2139072 | 2139146 | + | 75 | 77461965 | RSP_4312 | - | 04 Glu tRNA
|

2344688 | 2344764 | + | 77 | 77461965 | RSP_4334 | - | 11 Arg tRNA
|

2361949 | 2362024 | - | 76 | 77461965 | RSP_4333 | - | 17 Phe tRNA
|

2370733 | 2370807 | + | 75 | 77461965 | RSP_4335 | - | 12 Thr tRNA
|

2455963 | 2456063 | + | 101 | 77461965 | RSP_4343 | - | SRP RNA, 4.5S RNA |

2495608 | 2495684 | + | 77 | 77461965 | RSP_4336 | - | 09 His tRNA
|

2608052 | 2608128 | - | 77 | 77461965 | RSP_4311 | - | 03 Pro tRNA
|

2687477 | 2687551 | + | 75 | 77461965 | RSP_4329 | - | 10 Lys tRNA
|

2741730 | 2741805 | + | 76 | 77461965 | RSP_4330 | - | 02 Ala tRNA
|

2813672 | 2813748 | - | 77 | 77461965 | RSP_4320 | - | 11 Arg tRNA
|

2916083 | 2916167 | + | 85 | 77461965 | RSP_4332 | - | 15 Leu tRNA
|

3176758 | 3176832 | - | 75 | 77461965 | RSP_4309 | - | 13 Val tRNA
|