Материалы:NC 008027

```
LOCUS NC_008027 5888780 bp DNA circular BCT 14-SEP-2007
DEFINITION Pseudomonas entomophila L48, complete genome.
ACCESSION NC_008027
VERSION NC_008027.1 GI:104779316
KEYWORDS .
SOURCE Pseudomonas entomophila L48
ORGANISM Pseudomonas entomophila L48
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 5888780)
AUTHORS Vodovar,N., Vallenet,D., Cruveiller,S., Rouy,Z., Barbe,V.,
Acosta,C., Cattolico,L., Jubin,C., Lajus,A., Segurens,B.,
Vacherie,B., Wincker,P., Weissenbach,J., Lemaitre,B., Medigue,C.
and Boccard,F.
TITLE Complete genome sequence of the entomopathogenic and metabolically
versatile soil bacterium Pseudomonas entomophila
JOURNAL Nat. Biotechnol. 24 (6), 673-679 (2006)
PUBMED 16699499
REFERENCE 2 (bases 1 to 5888780)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (16-MAY-2006) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5888780)
AUTHORS Genoscope.
TITLE Direct Submission
JOURNAL Submitted (27-JAN-2006) Genoscope - Centre National de Sequencage :
BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr
- Web : www.genoscope.cns.fr)
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CT573326.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

115507 | 117024 | + | 1518 | 104779316 | PSEEN_16s_3 | - | ribosomal RNA 16s |

117106 | 117182 | + | 77 | 104779316 | PSEENtRNA1 | - | 14 Ile tRNA
|

117189 | 117264 | + | 76 | 104779316 | PSEENtRNA2 | - | 02 Ala tRNA
|

117510 | 120411 | + | 2902 | 104779316 | PSEEN_23s_3 | - | ribosomal RNA 23s |

120536 | 120655 | + | 120 | 104779316 | PSEEN_5s_3 | - | ribosomal RNA 5s |

120761 | 120880 | + | 120 | 104779316 | PSEEN_5s_4 | - | ribosomal RNA 5s |

180363 | 180439 | - | 77 | 104779316 | PSEENtRNA78 | - | 11 Arg tRNA
|

431613 | 431689 | - | 77 | 104779316 | PSEENtRNA77 | - | 16 Met tRNA
|

490048 | 491565 | + | 1518 | 104779316 | PSEEN_16s_4 | - | ribosomal RNA 16s |

491647 | 491723 | + | 77 | 104779316 | PSEENtRNA3 | - | 14 Ile tRNA
|

491730 | 491805 | + | 76 | 104779316 | PSEENtRNA4 | - | 02 Ala tRNA
|

492051 | 494952 | + | 2902 | 104779316 | PSEEN_23s_4 | - | ribosomal RNA 23s |

495075 | 495194 | + | 120 | 104779316 | PSEEN_5s_5 | - | ribosomal RNA 5s |

497718 | 497801 | + | 84 | 104779316 | PSEENtRNA5 | - | 18 Tyr tRNA
|

497826 | 497899 | + | 74 | 104779316 | PSEENtRNA6 | - | 01 Gly tRNA
|

497928 | 498003 | + | 76 | 104779316 | PSEENtRNA7 | - | 12 Thr tRNA
|

499331 | 499406 | + | 76 | 104779316 | PSEENtRNA8 | - | 20 Trp tRNA
|

585849 | 585944 | + | 96 | 104779316 | PSEENtRNA9 | - | Sec tRNA |

696516 | 698033 | + | 1518 | 104779316 | PSEEN_16s_5 | - | ribosomal RNA 16s |

698115 | 698191 | + | 77 | 104779316 | PSEENtRNA10 | - | 14 Ile tRNA
|

698198 | 698273 | + | 76 | 104779316 | PSEENtRNA11 | - | 02 Ala tRNA
|

698519 | 701421 | + | 2903 | 104779316 | PSEEN_23s_5 | - | ribosomal RNA 23s |

701544 | 701663 | + | 120 | 104779316 | PSEEN_5s_6 | - | ribosomal RNA 5s |

791375 | 791766 | - | 392 | 104779316 | PSEENmisc_RNA791375R | - | tmRNA involved in trans-translation |

822290 | 822375 | + | 86 | 104779316 | PSEENtRNA12 | - | 15 Leu tRNA
|

822475 | 822551 | + | 77 | 104779316 | PSEENtRNA13 | - | 16 Met tRNA
|

872404 | 872480 | - | 77 | 104779316 | PSEENtRNA76 | - | 16 Met tRNA
|

892253 | 892327 | - | 75 | 104779316 | PSEENtRNA75 | - | 05 Gln tRNA
|

1052156 | 1052240 | - | 85 | 104779316 | PSEENtRNA74 | - | 15 Leu tRNA
|

1375561 | 1377078 | + | 1518 | 104779316 | PSEEN_16s_6 | - | ribosomal RNA 16s |

1377160 | 1377236 | + | 77 | 104779316 | PSEENtRNA14 | - | 14 Ile tRNA
|

1377243 | 1377318 | + | 76 | 104779316 | PSEENtRNA15 | - | 02 Ala tRNA
|

1377564 | 1380465 | + | 2902 | 104779316 | PSEEN_23s_6 | - | ribosomal RNA 23s |

1380588 | 1380707 | + | 120 | 104779316 | PSEEN_5s_7 | - | ribosomal RNA 5s |

1472196 | 1472271 | + | 76 | 104779316 | PSEENtRNA16 | - | 13 Val tRNA
|

1472285 | 1472361 | + | 77 | 104779316 | PSEENtRNA17 | - | 06 Asp tRNA
|

1616236 | 1616325 | + | 90 | 104779316 | PSEENtRNA18 | - | 08 Ser tRNA
|

1660302 | 1660377 | + | 76 | 104779316 | PSEENtRNA19 | - | 04 Glu tRNA
|

1660380 | 1660455 | + | 76 | 104779316 | PSEENtRNA20 | - | 01 Gly tRNA
|

1660548 | 1660623 | + | 76 | 104779316 | PSEENtRNA21 | - | 04 Glu tRNA
|

1660627 | 1660702 | + | 76 | 104779316 | PSEENtRNA22 | - | 01 Gly tRNA
|

1660785 | 1660860 | + | 76 | 104779316 | PSEENtRNA23 | - | 01 Gly tRNA
|

1700426 | 1700501 | - | 76 | 104779316 | PSEENtRNA73 | - | 07 Asn tRNA
|

1708730 | 1708805 | + | 76 | 104779316 | PSEENtRNA24 | - | 02 Ala tRNA
|

1708878 | 1708953 | + | 76 | 104779316 | PSEENtRNA25 | - | 04 Glu tRNA
|

1709006 | 1709081 | + | 76 | 104779316 | PSEENtRNA26 | - | 02 Ala tRNA
|

1709124 | 1709199 | + | 76 | 104779316 | PSEENtRNA27 | - | 04 Glu tRNA
|

1709266 | 1709341 | + | 76 | 104779316 | PSEENtRNA28 | - | 02 Ala tRNA
|

1709384 | 1709459 | + | 76 | 104779316 | PSEENtRNA29 | - | 04 Glu tRNA
|

1767502 | 1767577 | + | 76 | 104779316 | PSEENtRNA30 | - | 13 Val tRNA
|

1767659 | 1767735 | + | 77 | 104779316 | PSEENtRNA31 | - | 06 Asp tRNA
|

1767818 | 1767894 | + | 77 | 104779316 | PSEENtRNA32 | - | 06 Asp tRNA
|

1768034 | 1768110 | + | 77 | 104779316 | PSEENtRNA33 | - | 06 Asp tRNA
|

1854972 | 1855084 | + | 113 | 104779316 | PSEENmisc_RNA1854972D | - | mature 4.5S RN |

1952643 | 1952719 | + | 77 | 104779316 | PSEENtRNA34 | - | 11 Arg tRNA
|

1952755 | 1952830 | + | 76 | 104779316 | PSEENtRNA35 | - | 09 His tRNA
|

1952887 | 1952971 | + | 85 | 104779316 | PSEENtRNA36 | - | 15 Leu tRNA
|

1953008 | 1953083 | + | 76 | 104779316 | PSEENtRNA37 | - | 09 His tRNA
|

2054946 | 2055022 | + | 77 | 104779316 | PSEENtRNA38 | - | 03 Pro tRNA
|

2275429 | 2275505 | + | 77 | 104779316 | PSEENtRNA39 | - | 13 Val tRNA
|

2275839 | 2275915 | + | 77 | 104779316 | PSEENtRNA40 | - | 13 Val tRNA
|

2337548 | 2337635 | + | 88 | 104779316 | PSEENtRNA41 | - | 08 Ser tRNA
|

2367754 | 2367827 | + | 74 | 104779316 | PSEENtRNA42 | - | 19 Cys tRNA
|

2370221 | 2370305 | - | 85 | 104779316 | PSEENtRNA72 | - | 15 Leu tRNA
|

2739329 | 2740846 | + | 1518 | 104779316 | PSEEN_16s_7 | - | ribosomal RNA 16s |

2740928 | 2741004 | + | 77 | 104779316 | PSEENtRNA43 | - | 14 Ile tRNA
|

2741011 | 2741086 | + | 76 | 104779316 | PSEENtRNA44 | - | 02 Ala tRNA
|

2741332 | 2744233 | + | 2902 | 104779316 | PSEEN_23s_7 | - | ribosomal RNA 23s |

2744356 | 2744475 | + | 120 | 104779316 | PSEEN_5s_8 | - | ribosomal RNA 5s |

3656603 | 3656753 | + | 151 | 104779316 | PSEENmisc_RNA3656603D | - | regulatory RNA PrrF1 |

3670673 | 3670747 | - | 75 | 104779316 | PSEENtRNA71 | - | 05 Gln tRNA
|

3722568 | 3722643 | - | 76 | 104779316 | PSEENtRNA70 | - | 01 Gly tRNA
|

3795513 | 3795632 | - | 120 | 104779316 | PSEEN_5s_2 | - | ribosomal RNA 5s |

3795755 | 3798656 | - | 2902 | 104779316 | PSEEN_23s_2 | - | ribosomal RNA 23s |

3798902 | 3798977 | - | 76 | 104779316 | PSEENtRNA69 | - | 02 Ala tRNA
|

3798984 | 3799060 | - | 77 | 104779316 | PSEENtRNA68 | - | 14 Ile tRNA
|

3799142 | 3800659 | - | 1518 | 104779316 | PSEEN_16s_2 | - | ribosomal RNA 16s |

4024934 | 4025010 | + | 77 | 104779316 | PSEENtRNA45 | - | 03 Pro tRNA
|

4152602 | 4152678 | - | 77 | 104779316 | PSEENtRNA67 | - | 11 Arg tRNA
|

4156158 | 4156234 | - | 77 | 104779316 | PSEENtRNA66 | - | 11 Arg tRNA
|

4156304 | 4156380 | - | 77 | 104779316 | PSEENtRNA65 | - | 11 Arg tRNA
|

4156451 | 4156527 | - | 77 | 104779316 | PSEENtRNA64 | - | 11 Arg tRNA
|

4156598 | 4156674 | - | 77 | 104779316 | PSEENtRNA63 | - | 11 Arg tRNA
|

4156741 | 4156831 | - | 91 | 104779316 | PSEENtRNA62 | - | 08 Ser tRNA
|

4357182 | 4357271 | - | 90 | 104779316 | PSEENtRNA61 | - | 08 Ser tRNA
|

4381324 | 4381399 | - | 76 | 104779316 | PSEENtRNA60 | - | 10 Lys tRNA
|

4402622 | 4402698 | + | 77 | 104779316 | PSEENtRNA46 | - | 16 Met tRNA
|

4402830 | 4402906 | + | 77 | 104779316 | PSEENtRNA47 | - | 16 Met tRNA
|

4403039 | 4403115 | + | 77 | 104779316 | PSEENtRNA48 | - | 16 Met tRNA
|

4468721 | 4468852 | - | 132 | 104779316 | PSEENmisc_RNA4468721R | - | small regulatory RNA rsmZ |

4608564 | 4608637 | + | 74 | 104779316 | PSEENtRNA49 | - | 01 Gly tRNA
|

4810184 | 4810543 | - | 360 | 104779316 | PSEENmisc_RNA4810200R | - | RNA component of RNAseP (ribozyme) |

4967960 | 4968035 | - | 76 | 104779316 | PSEENtRNA59 | - | 12 Thr tRNA
|

4976158 | 4976233 | - | 76 | 104779316 | PSEENtRNA58 | - | 10 Lys tRNA
|

4976240 | 4976316 | - | 77 | 104779316 | PSEENtRNA57 | - | 03 Pro tRNA
|

4976321 | 4976396 | - | 76 | 104779316 | PSEENtRNA56 | - | 07 Asn tRNA
|

4998500 | 4998619 | - | 120 | 104779316 | PSEEN_5s_1 | - | ribosomal RNA 5s |

4998744 | 5001645 | - | 2902 | 104779316 | PSEEN_23s_1 | - | ribosomal RNA 23s |

5001891 | 5001966 | - | 76 | 104779316 | PSEENtRNA55 | - | 02 Ala tRNA
|

5001991 | 5002067 | - | 77 | 104779316 | PSEENtRNA54 | - | 14 Ile tRNA
|

5002158 | 5003675 | - | 1518 | 104779316 | PSEEN_16s_1 | - | ribosomal RNA 16s |

5016966 | 5017114 | + | 149 | 104779316 | PSEENmisc_RNA5016966D | - | regulatory RNA PrrF2 |

5236127 | 5236213 | + | 87 | 104779316 | PSEENtRNA50 | - | 15 Leu tRNA
|

5236301 | 5236387 | + | 87 | 104779316 | PSEENtRNA51 | - | 15 Leu tRNA
|

5427050 | 5427174 | - | 125 | 104779316 | PSEENmisc_RNA5427050R | - | rsmY regulatory RNA |

5528261 | 5528336 | + | 76 | 104779316 | PSEENtRNA52 | - | 17 Phe tRNA
|

5540601 | 5540676 | + | 76 | 104779316 | PSEENtRNA53 | - | 12 Thr tRNA
|