Материалы:NC 008800

```
LOCUS NC_008800 4615899 bp DNA circular BCT 20-JAN-2007
DEFINITION Yersinia enterocolitica subsp. enterocolitica 8081, complete
genome.
ACCESSION NC_008800
VERSION NC_008800.1 GI:123440403
KEYWORDS complete genome.
SOURCE Yersinia enterocolitica subsp. enterocolitica 8081
ORGANISM Yersinia enterocolitica subsp. enterocolitica 8081
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Yersinia.
REFERENCE 1
AUTHORS Thomson,N.R., Howard,S., Wren,B.W., Holden,M.T., Crossman,L.,
Challis,G.L., Churcher,C., Mungall,K., Brooks,K., Chillingworth,T.,
Feltwell,T., Abdellah,Z., Hauser,H., Jagels,K., Maddison,M.,
Moule,S., Sanders,M., Whitehead,S., Quail,M.A., Dougan,G.,
Parkhill,J. and Prentice,M.B.
TITLE The Complete Genome Sequence and Comparative Genome Analysis of the
High Pathogenicity Yersinia enterocolitica Strain 8081
JOURNAL (er) PLoS Genet. 2 (12), E206 (2006)
PUBMED 17173484
REFERENCE 2
AUTHORS Delihas,N.
TITLE Annotation and evolutionary relationships of a small regulatory RNA
gene micF and its target ompF in Yersinia species
JOURNAL (er) BMC Microbiol. 3, 13 (2003)
PUBMED 12834539
REFERENCE 3 (bases 1 to 4615899)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-JAN-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (bases 1 to 4615899)
AUTHORS Thomson,N.R.
TITLE Direct Submission
JOURNAL Submitted (30-JUN-2006) Thomson N.R., Pathogen Sequencing Unit, The
Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge,
CB10 1SA, UNITED KINGDOM
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AM286415.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

17506 | 18994 | + | 1489 | 123440403 | YEr001 | - | 16S ribosomal RNA |

19220 | 19295 | + | 76 | 123440403 | YEt001 | - | 04 Glu tRNA
|

19674 | 22667 | + | 2994 | 123440403 | YEr002 | - | 23S ribosomal RNA |

22667 | 22908 | + | 242 | 123440403 | YEr003 | - | 5S ribosomal RNA |

30017 | 30134 | + | 118 | 123440403 | YEs001 | - | |

31382 | 31582 | + | 201 | 123440403 | YEs002 | - | |

157085 | 157301 | + | 217 | 123440403 | YEs003 | - | |

160552 | 162040 | + | 1489 | 123440403 | YEr004 | - | 16S ribosomal RNA |

162169 | 162245 | + | 77 | 123440403 | YEt002 | - | 14 Ile tRNA
|

162320 | 162395 | + | 76 | 123440403 | YEt003 | - | 02 Ala tRNA
|

162741 | 165734 | + | 2994 | 123440403 | YEr005 | - | 23S ribosomal RNA |

165734 | 165970 | + | 237 | 123440403 | YEr006 | - | 5S ribosomal RNA |

166090 | 166166 | + | 77 | 123440403 | YEt004 | - | 06 Asp tRNA
|

166220 | 166295 | + | 76 | 123440403 | YEt005 | - | 20 Trp tRNA
|

217919 | 217995 | + | 77 | 123440403 | YEt006 | - | 11 Arg tRNA
|

218079 | 218154 | + | 76 | 123440403 | YEt007 | - | 09 His tRNA
|

218170 | 218256 | + | 87 | 123440403 | YEt008 | - | 15 Leu tRNA
|

218332 | 218408 | + | 77 | 123440403 | YEt009 | - | 03 Pro tRNA
|

314127 | 315615 | + | 1489 | 123440403 | YEr007 | - | 16S ribosomal RNA |

315840 | 315915 | + | 76 | 123440403 | YEt010 | - | 04 Glu tRNA
|

316294 | 319287 | + | 2994 | 123440403 | YEr008 | - | 23S ribosomal RNA |

319287 | 319527 | + | 241 | 123440403 | YEr009 | - | 5S ribosomal RNA |

323856 | 323931 | + | 76 | 123440403 | YEt011 | - | 12 Thr tRNA
|

323950 | 324034 | + | 85 | 123440403 | YEt012 | - | 18 Tyr tRNA
|

324050 | 324207 | + | 158 | 123440403 | YEs004 | - | |

324352 | 324426 | + | 75 | 123440403 | YEt013 | - | 01 Gly tRNA
|

324433 | 324508 | + | 76 | 123440403 | YEt014 | - | 12 Thr tRNA
|

345526 | 345651 | - | 126 | 123440403 | YEs005 | - | |

354706 | 356194 | + | 1489 | 123440403 | YEr010 | - | 16S ribosomal RNA |

356419 | 356494 | + | 76 | 123440403 | YEt015 | - | 04 Glu tRNA
|

356873 | 359866 | + | 2994 | 123440403 | YEr011 | - | 23S ribosomal RNA |

359866 | 360103 | + | 238 | 123440403 | YEr012 | - | 5S ribosomal RNA |

411468 | 411543 | - | 76 | 123440403 | YEt016 | - | 17 Phe tRNA
|

437336 | 437411 | + | 76 | 123440403 | YEt017 | - | 01 Gly tRNA
|

437503 | 437578 | + | 76 | 123440403 | YEt018 | - | 01 Gly tRNA
|

437653 | 437728 | + | 76 | 123440403 | YEt019 | - | 01 Gly tRNA
|

500681 | 500767 | + | 87 | 123440403 | YEt020 | - | 15 Leu tRNA
|

500828 | 500904 | + | 77 | 123440403 | YEt021 | - | 16 Met tRNA
|

507310 | 507428 | + | 119 | 123440403 | YEs006 | - | |

507658 | 507838 | - | 181 | 123440403 | YEs007 | - | |

579198 | 579282 | + | 85 | 123440403 | YEt022 | - | 15 Leu tRNA
|

643860 | 643946 | - | 87 | 123440403 | YEt023 | - | 15 Leu tRNA
|

644011 | 644097 | - | 87 | 123440403 | YEt024 | - | 15 Leu tRNA
|

687073 | 687191 | + | 119 | 123440403 | YEs008 | - | |

739972 | 740050 | - | 79 | 123440403 | YEs009 | - | |

962917 | 963009 | + | 93 | 123440403 | YEt025 | - | 08 Ser tRNA
|

963018 | 963094 | + | 77 | 123440403 | YEt026 | - | 11 Arg tRNA
|

963153 | 963229 | + | 77 | 123440403 | YEt027 | - | 11 Arg tRNA
|

966432 | 966506 | - | 75 | 123440403 | YEs010 | - | |

1019206 | 1020694 | + | 1489 | 123440403 | YEr013 | - | 16S ribosomal RNA |

1020919 | 1020994 | + | 76 | 123440403 | YEt028 | - | 04 Glu tRNA
|

1021373 | 1024366 | + | 2994 | 123440403 | YEr014 | - | 23S ribosomal RNA |

1024366 | 1024602 | + | 237 | 123440403 | YEr015 | - | 5S ribosomal RNA |

1024722 | 1024798 | + | 77 | 123440403 | YEt029 | - | 06 Asp tRNA
|

1049625 | 1049701 | + | 77 | 123440403 | YEt030 | - | 06 Asp tRNA
|

1116169 | 1116549 | - | 381 | 123440403 | YEs011 | - | |

1219794 | 1219897 | + | 104 | 123440403 | YEs012 | - | |

1354016 | 1354091 | - | 76 | 123440403 | YEt031 | - | 02 Ala tRNA
|

1354171 | 1354246 | - | 76 | 123440403 | YEt032 | - | 02 Ala tRNA
|

1356094 | 1356169 | + | 76 | 123440403 | YEt033 | - | 13 Val tRNA
|

1356224 | 1356299 | + | 76 | 123440403 | YEt034 | - | 13 Val tRNA
|

1356339 | 1356414 | + | 76 | 123440403 | YEt035 | - | 13 Val tRNA
|

1356606 | 1356681 | + | 76 | 123440403 | YEt036 | - | 10 Lys tRNA
|

1356689 | 1356852 | + | 164 | 123440403 | YEs013 | - | |

1356860 | 1357023 | + | 164 | 123440403 | YEs014 | - | |

1405212 | 1405286 | - | 75 | 123440403 | YEt037 | - | 11 Arg tRNA
|

1482285 | 1482585 | - | 301 | 123440403 | YEs015 | - | |

1571499 | 1571589 | - | 91 | 123440403 | YEs016 | - | |

1571842 | 1573016 | + | 1175 | 123440403 | YE1401 | - | |

1573270 | 1573357 | + | 88 | 123440403 | YEt038 | - | 08 Ser tRNA
|

1573364 | 1573439 | + | 76 | 123440403 | YEt039 | - | 12 Thr tRNA
|

1591923 | 1591999 | - | 77 | 123440403 | YEt040 | - | 03 Pro tRNA
|

1660972 | 1661052 | - | 81 | 123440403 | YEs017 | - | |

1757957 | 1759190 | - | 1234 | 123440403 | YE1563 | - | |

1796717 | 1796804 | + | 88 | 123440403 | YEt041 | - | 08 Ser tRNA
|

1834478 | 1834817 | - | 340 | 123440403 | YEs018 | - | |

1966735 | 1966897 | - | 163 | 123440403 | YEs019 | - | |

1991547 | 1991664 | - | 118 | 123440403 | YEs020 | - | |

1991571 | 1991671 | + | 101 | 123440403 | YEs021 | - | |

2001664 | 2001781 | + | 118 | 123440403 | YEs022 | - | |

2002787 | 2002862 | + | 76 | 123440403 | YEt042 | - | 12 Thr tRNA
|

2002864 | 2002938 | + | 75 | 123440403 | YEt043 | - | 01 Gly tRNA
|

2013450 | 2013535 | - | 86 | 123440403 | YEt044 | - | 15 Leu tRNA
|

2013546 | 2013619 | - | 74 | 123440403 | YEt045 | - | 19 Cys tRNA
|

2013670 | 2013745 | - | 76 | 123440403 | YEt046 | - | 01 Gly tRNA
|

2133260 | 2133335 | + | 76 | 123440403 | YEt047 | - | 10 Lys tRNA
|

2325478 | 2325580 | - | 103 | 123440403 | YEs023 | - | |

2365851 | 2365927 | + | 77 | 123440403 | YEt048 | - | 13 Val tRNA
|

2365976 | 2366052 | + | 77 | 123440403 | YEt049 | - | 13 Val tRNA
|

2366095 | 2366171 | + | 77 | 123440403 | YEt050 | - | 13 Val tRNA
|

2382205 | 2382313 | + | 109 | 123440403 | YEs024 | - | |

2460533 | 2460617 | + | 85 | 123440403 | YEt051 | - | 18 Tyr tRNA
|

2460631 | 2460791 | + | 161 | 123440403 | YEs025 | - | |

2460805 | 2460965 | + | 161 | 123440403 | YEs026 | - | |

2460979 | 2461139 | + | 161 | 123440403 | YEs027 | - | |

2461153 | 2461313 | + | 161 | 123440403 | YEs028 | - | |

2613470 | 2613559 | + | 90 | 123440403 | YEt052 | - | 08 Ser tRNA
|

2614794 | 2614883 | + | 90 | 123440403 | YEt053 | - | 08 Ser tRNA
|

2810915 | 2810990 | + | 76 | 123440403 | YEt054 | - | 07 Asn tRNA
|

2881784 | 2881859 | + | 76 | 123440403 | YEt055 | - | 07 Asn tRNA
|

2893538 | 2893613 | + | 76 | 123440403 | YEt056 | - | 07 Asn tRNA
|

3185286 | 3185361 | - | 76 | 123440403 | YEt057 | - | 10 Lys tRNA
|

3185420 | 3185495 | - | 76 | 123440403 | YEt058 | - | 10 Lys tRNA
|

3185592 | 3185662 | - | 71 | 123440403 | YEt059 | - | Xaa tRNA |

3185720 | 3185795 | - | 76 | 123440403 | YEt060 | - | 10 Lys tRNA
|

3185886 | 3185958 | - | 73 | 123440403 | YEt061 | - | 10 Lys tRNA
|

3252927 | 3253003 | + | 77 | 123440403 | YEt062 | - | 16 Met tRNA
|

3253019 | 3253103 | + | 85 | 123440403 | YEt063 | - | 15 Leu tRNA
|

3253127 | 3253201 | + | 75 | 123440403 | YEt064 | - | 05 Gln tRNA
|

3253325 | 3253399 | + | 75 | 123440403 | YEt065 | - | 05 Gln tRNA
|

3253431 | 3253507 | + | 77 | 123440403 | YEt066 | - | 16 Met tRNA
|

3253513 | 3253587 | + | 75 | 123440403 | YEt067 | - | 05 Gln tRNA
|

3311810 | 3311886 | - | 77 | 123440403 | YEt068 | - | 11 Arg tRNA
|

3329500 | 3329583 | - | 84 | 123440403 | YEs029 | - | |

3388006 | 3388105 | - | 100 | 123440403 | YEs030 | - | |

3546822 | 3547063 | - | 242 | 123440403 | YEr016 | - | 5S ribosomal RNA |

3547063 | 3550056 | - | 2994 | 123440403 | YEr017 | - | 23S ribosomal RNA |

3550402 | 3550477 | - | 76 | 123440403 | YEt069 | - | 02 Ala tRNA
|

3550552 | 3550628 | - | 77 | 123440403 | YEt070 | - | 14 Ile tRNA
|

3550757 | 3552245 | - | 1489 | 123440403 | YEr018 | - | 16S ribosomal RNA |

3586741 | 3586915 | - | 175 | 123440403 | YEs031 | - | |

3595392 | 3595708 | - | 317 | 123440403 | YEs032 | - | |

3602754 | 3602859 | + | 106 | 123440403 | YEs033 | - | |

3607498 | 3607574 | + | 77 | 123440403 | YEt071 | - | 16 Met tRNA
|

3607677 | 3607753 | + | 77 | 123440403 | YEt072 | - | 16 Met tRNA
|

3607805 | 3607881 | + | 77 | 123440403 | YEt073 | - | 16 Met tRNA
|

3638306 | 3638400 | - | 95 | 123440403 | YEs034 | - | |

3685747 | 3685820 | - | 74 | 123440403 | YEt074 | - | 01 Gly tRNA
|

3711867 | 3712049 | + | 183 | 123440403 | YEs035 | - | |

3761922 | 3761997 | + | 76 | 123440403 | YEt075 | - | 17 Phe tRNA
|

3828040 | 3828092 | - | 53 | 123440403 | YEt076 | - | 17 Phe tRNA
|

4002700 | 4002884 | - | 185 | 123440403 | YEs036 | - | |

4021243 | 4021319 | + | 77 | 123440403 | YEt077 | - | 16 Met tRNA
|

4045482 | 4045665 | + | 184 | 123440403 | YEs037 | - | |

4067369 | 4067671 | - | 303 | 123440403 | YEs038 | - | |

4239160 | 4239290 | - | 131 | 123440403 | YEr019 | - | 5S ribosomal RNA |

4239324 | 4239399 | - | 76 | 123440403 | YEt078 | - | 12 Thr tRNA
|

4239407 | 4239648 | - | 242 | 123440403 | YEr020 | - | 5S ribosomal RNA |

4239648 | 4242641 | - | 2994 | 123440403 | YEr021 | - | 23S ribosomal RNA |

4242987 | 4243062 | - | 76 | 123440403 | YEt079 | - | 02 Ala tRNA
|

4243137 | 4243213 | - | 77 | 123440403 | YEt080 | - | 14 Ile tRNA
|

4243342 | 4244830 | - | 1489 | 123440403 | YEr022 | - | 16S ribosomal RNA |

4258864 | 4258975 | - | 112 | 123440403 | YEs039 | - | |

4382149 | 4382251 | - | 103 | 123440403 | YEs040 | - | |

4469630 | 4469706 | - | 77 | 123440403 | YEt081 | - | 03 Pro tRNA
|

4504182 | 4504272 | - | 91 | 123440403 | YEt082 | - | Sec tRNA |