Материалы:NC 007929

```
LOCUS NC_007929 1827111 bp DNA circular BCT 03-MAY-2006
DEFINITION Lactobacillus salivarius subsp. salivarius UCC118, complete genome.
ACCESSION NC_007929
VERSION NC_007929.1 GI:90960990
KEYWORDS .
SOURCE Lactobacillus salivarius subsp. salivarius UCC118
ORGANISM Lactobacillus salivarius subsp. salivarius UCC118
Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae;
Lactobacillus.
REFERENCE 1 (bases 1 to 1827111)
AUTHORS Claesson,M.J., Li,Y., Leahy,S., Canchaya,C., van Pijkeren,J.P.,
Cerdeno-Tarraga,A.M., Parkhill,J., Flynn,S., O'sullivan,G.C.,
Collins,J.K., Higgins,D., Shanahan,F., Fitzgerald,G.F., van
Sinderen,D. and O'toole,P.W.
TITLE From the Cover: Multireplicon genome architecture of Lactobacillus
salivarius
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 103 (17), 6718-6723 (2006)
PUBMED 16617113
REFERENCE 2 (bases 1 to 1827111)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (01-APR-2006) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1827111)
AUTHORS Claesson,M.J., Li,Y., Leahy,S., Canchaya,C., van Pijkeren,J.P.,
Cerdeno-Tarraga,A.M., Parkhill,J., Flynn,S., O'Sullivan,G.C.,
Collins,J.K., Higgins,D.G., Shanahan,F., Fitzgerald,G.F., van
Sinderen,D. and O'Toole,P.W.
CONSRTM Alimentary Pharmabiotic Centre, University College Cork
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2005) Department of Microbiology, Alimentary
Pharmabiotic Centre, University College Cork, College Road, Cork,
Ireland
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000233.
COMPLETENESS: full length.
Source DNA is available from Eva McArdle at Alimentary Pharmabiotic
Centre (e.mcardle@ucc.ie).
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

74540 | 76056 | + | 1517 | 90960990 | LSL_RNA001 | - | 16S ribosomal RNA |

76070 | 79029 | + | 2960 | 90960990 | LSL_RNA002 | - | 23S ribosomal RNA |

79274 | 79390 | + | 117 | 90960990 | LSL_RNA003 | - | 5S ribosomal RNA |

217778 | 219294 | + | 1517 | 90960990 | LSL_RNA004 | - | 16S ribosomal RNA |

219398 | 219472 | + | 75 | 90960990 | LSL_RNA119 | - | 14 Ile tRNA
|

219504 | 219576 | + | 73 | 90960990 | LSL_RNA120 | - | 02 Ala tRNA
|

219703 | 222482 | + | 2780 | 90960990 | LSL_RNA007 | - | 23S ribosomal RNA |

222727 | 222843 | + | 117 | 90960990 | LSL_RNA008 | - | 5S ribosomal RNA |

222849 | 222921 | + | 73 | 90960990 | LSL_RNA009 | - | 13 Val tRNA
|

222925 | 222997 | + | 73 | 90960990 | LSL_RNA010 | - | 10 Lys tRNA
|

223013 | 223098 | + | 86 | 90960990 | LSL_RNA011 | - | 15 Leu tRNA
|

223107 | 223179 | + | 73 | 90960990 | LSL_RNA012 | - | 12 Thr tRNA
|

223184 | 223255 | + | 72 | 90960990 | LSL_RNA013 | - | 01 Gly tRNA
|

223265 | 223350 | + | 86 | 90960990 | LSL_RNA014 | - | 15 Leu tRNA
|

223359 | 223432 | + | 74 | 90960990 | LSL_RNA015 | - | 11 Arg tRNA
|

223480 | 223553 | + | 74 | 90960990 | LSL_RNA016 | - | 11 Arg tRNA
|

223558 | 223631 | + | 74 | 90960990 | LSL_RNA017 | - | 03 Pro tRNA
|

231540 | 231613 | + | 74 | 90960990 | LSL_RNA018 | - | 03 Pro tRNA
|

268098 | 268170 | - | 73 | 90960990 | LSL_RNA019 | - | 12 Thr tRNA
|

434853 | 436380 | + | 1528 | 90960990 | LSL_RNA021 | - | 16S ribosomal RNA |

436484 | 436558 | + | 75 | 90960990 | LSL_RNA121 | - | 14 Ile tRNA
|

436590 | 436662 | + | 73 | 90960990 | LSL_RNA122 | - | 02 Ala tRNA
|

436789 | 439568 | + | 2780 | 90960990 | LSL_RNA025 | - | 23S ribosomal RNA |

439813 | 439929 | + | 117 | 90960990 | LSL_RNA108 | - | 5S ribosomal RNA |

439935 | 440007 | + | 73 | 90960990 | LSL_RNA123 | - | 07 Asn tRNA
|

440022 | 440111 | + | 90 | 90960990 | LSL_RNA030 | - | 08 Ser tRNA
|

440126 | 440200 | + | 75 | 90960990 | LSL_RNA124 | - | 04 Glu tRNA
|

440203 | 440275 | + | 73 | 90960990 | LSL_RNA032 | - | 13 Val tRNA
|

440285 | 440357 | + | 73 | 90960990 | LSL_RNA125 | - | 06 Asp tRNA
|

440383 | 440458 | + | 76 | 90960990 | LSL_RNA126 | - | 17 Phe tRNA
|

440463 | 440545 | + | 83 | 90960990 | LSL_RNA035 | - | 18 Tyr tRNA
|

440558 | 440631 | + | 74 | 90960990 | LSL_RNA036 | - | 20 Trp tRNA
|

440638 | 440710 | + | 73 | 90960990 | LSL_RNA037 | - | 09 His tRNA
|

440722 | 440793 | + | 72 | 90960990 | LSL_RNA038 | - | 05 Gln tRNA
|

440803 | 440873 | + | 71 | 90960990 | LSL_RNA039 | - | 19 Cys tRNA
|

440904 | 440988 | + | 85 | 90960990 | LSL_RNA040 | - | 15 Leu tRNA
|

480393 | 481909 | + | 1517 | 90960990 | LSL_RNA041 | - | 16S ribosomal RNA |

481923 | 484882 | + | 2960 | 90960990 | LSL_RNA042 | - | 23S ribosomal RNA |

485127 | 485243 | + | 117 | 90960990 | LSL_RNA044 | - | 5S ribosomal RNA |

485249 | 485321 | + | 73 | 90960990 | LSL_RNA045 | - | 13 Val tRNA
|

485325 | 485397 | + | 73 | 90960990 | LSL_RNA046 | - | 10 Lys tRNA
|

485463 | 485535 | + | 73 | 90960990 | LSL_RNA047 | - | 12 Thr tRNA
|

485540 | 485611 | + | 72 | 90960990 | LSL_RNA048 | - | 01 Gly tRNA
|

485624 | 485709 | + | 86 | 90960990 | LSL_RNA049 | - | 15 Leu tRNA
|

485718 | 485791 | + | 74 | 90960990 | LSL_RNA050 | - | 11 Arg tRNA
|

485798 | 485871 | + | 74 | 90960990 | LSL_RNA051 | - | 03 Pro tRNA
|

485896 | 485969 | + | 74 | 90960990 | LSL_RNA052 | - | 16 Met tRNA
|

485986 | 486059 | + | 74 | 90960990 | LSL_RNA053 | - | 16 Met tRNA
|

486100 | 486189 | + | 90 | 90960990 | LSL_RNA054 | - | 08 Ser tRNA
|

486200 | 486273 | + | 74 | 90960990 | LSL_RNA055 | - | 16 Met tRNA
|

486278 | 486350 | + | 73 | 90960990 | LSL_RNA056 | - | 06 Asp tRNA
|

486360 | 486432 | + | 73 | 90960990 | LSL_RNA057 | - | 17 Phe tRNA
|

486452 | 486522 | + | 71 | 90960990 | LSL_RNA058 | - | 01 Gly tRNA
|

486531 | 486604 | + | 74 | 90960990 | LSL_RNA059 | - | 14 Ile tRNA
|

486608 | 486695 | + | 88 | 90960990 | LSL_RNA060 | - | 08 Ser tRNA
|

486700 | 486771 | + | 72 | 90960990 | LSL_RNA061 | - | 04 Glu tRNA
|

486794 | 486867 | + | 74 | 90960990 | LSL_RNA062 | - | 16 Met tRNA
|

486872 | 486944 | + | 73 | 90960990 | LSL_RNA063 | - | 06 Asp tRNA
|

497858 | 497941 | - | 84 | 90960990 | LSL_RNA064 | - | 15 Leu tRNA
|

567245 | 567318 | - | 74 | 90960990 | LSL_RNA065 | - | 11 Arg tRNA
|

624842 | 624914 | + | 73 | 90960990 | LSL_RNA066 | - | 05 Gln tRNA
|

723535 | 723605 | - | 71 | 90960990 | LSL_RNA067 | - | 01 Gly tRNA
|

797253 | 797323 | + | 71 | 90960990 | LSL_RNA127 | - | Xaa tRNA |

825965 | 826052 | - | 88 | 90960990 | LSL_RNA068 | - | 08 Ser tRNA
|

956549 | 956619 | - | 71 | 90960990 | LSL_RNA069 | - | 01 Gly tRNA
|

1130195 | 1130267 | - | 73 | 90960990 | LSL_RNA070 | - | 04 Glu tRNA
|

1203000 | 1203071 | - | 72 | 90960990 | LSL_RNA071 | - | Xaa tRNA |

1287765 | 1287850 | - | 86 | 90960990 | LSL_RNA072 | - | 15 Leu tRNA
|

1295428 | 1295499 | - | 72 | 90960990 | LSL_RNA073 | - | 05 Gln tRNA
|

1295503 | 1295588 | - | 86 | 90960990 | LSL_RNA074 | - | 18 Tyr tRNA
|

1297458 | 1297783 | - | 326 | 90960990 | LSL_RNA075 | - | 5S ribosomal RNA |

1297819 | 1300778 | - | 2960 | 90960990 | LSL_RNA076 | - | 23S ribosomal RNA |

1300792 | 1302308 | - | 1517 | 90960990 | LSL_RNA077 | - | 16S ribosomal RNA |

1326134 | 1326207 | - | 74 | 90960990 | LSL_RNA078 | - | 11 Arg tRNA
|

1406882 | 1406954 | - | 73 | 90960990 | LSL_RNA079 | - | 12 Thr tRNA
|

1406970 | 1407041 | - | 72 | 90960990 | LSL_RNA080 | - | 04 Glu tRNA
|

1407046 | 1407118 | - | 73 | 90960990 | LSL_RNA081 | - | 07 Asn tRNA
|

1407124 | 1407240 | - | 117 | 90960990 | LSL_RNA082 | - | 5S ribosomal RNA |

1407481 | 1410440 | - | 2960 | 90960990 | LSL_RNA083 | - | 23S ribosomal RNA |

1410454 | 1411970 | - | 1517 | 90960990 | LSL_RNA084 | - | 16S ribosomal RNA |

1754142 | 1754217 | + | 76 | 90960990 | LSL_RNA085 | - | 10 Lys tRNA
|

1763092 | 1763167 | + | 76 | 90960990 | LSL_RNA086 | - | 10 Lys tRNA
|

1812695 | 1812782 | - | 88 | 90960990 | LSL_RNA087 | - | 15 Leu tRNA
|

1812813 | 1812883 | - | 71 | 90960990 | LSL_RNA088 | - | 19 Cys tRNA
|

1812908 | 1812979 | - | 72 | 90960990 | LSL_RNA089 | - | 05 Gln tRNA
|

1812990 | 1813062 | - | 73 | 90960990 | LSL_RNA090 | - | 09 His tRNA
|

1813069 | 1813142 | - | 74 | 90960990 | LSL_RNA091 | - | 20 Trp tRNA
|

1813155 | 1813237 | - | 83 | 90960990 | LSL_RNA092 | - | 18 Tyr tRNA
|

1813242 | 1813317 | - | 76 | 90960990 | LSL_RNA128 | - | 17 Phe tRNA
|

1813343 | 1813415 | - | 73 | 90960990 | LSL_RNA129 | - | 06 Asp tRNA
|

1813425 | 1813497 | - | 73 | 90960990 | LSL_RNA095 | - | 13 Val tRNA
|

1813500 | 1813574 | - | 75 | 90960990 | LSL_RNA130 | - | 04 Glu tRNA
|

1813589 | 1813678 | - | 90 | 90960990 | LSL_RNA097 | - | 08 Ser tRNA
|

1813693 | 1813765 | - | 73 | 90960990 | LSL_RNA131 | - | 07 Asn tRNA
|

1813771 | 1813887 | - | 117 | 90960990 | LSL_RNA099 | - | 5S ribosomal RNA |

1814132 | 1816911 | - | 2780 | 90960990 | LSL_RNA100 | - | 23S ribosomal RNA |

1817038 | 1817110 | - | 73 | 90960990 | LSL_RNA132 | - | 02 Ala tRNA
|

1817142 | 1817216 | - | 75 | 90960990 | LSL_RNA133 | - | 14 Ile tRNA
|

1817320 | 1818824 | - | 1505 | 90960990 | LSL_RNA103 | - | 16S ribosomal RNA |