Материалы:NC 002655

```
LOCUS NC_002655 5528445 bp DNA circular BCT 14-SEP-2007
DEFINITION Escherichia coli O157:H7 EDL933, complete genome.
ACCESSION NC_002655
VERSION NC_002655.2 GI:16445223
KEYWORDS .
SOURCE Escherichia coli O157:H7 EDL933
ORGANISM Escherichia coli O157:H7 EDL933
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Escherichia.
REFERENCE 1 (bases 1 to 5528445)
AUTHORS Perna,N.T., Plunkett,G.III, Burland,V., Mau,B., Glasner,J.D.,
Rose,D.J., Mayhew,G.F., Evans,P.S., Gregor,J., Kirkpatrick,H.A.,
Posfai,G., Hackett,J., Klink,S., Boutin,A., Shao,Y., Miller,L.,
Grotbeck,E.J., Davis,N.W., Lim,A., Dimalanta,E., Potamousis,K.,
Apodaca,J., Anantharaman,T.S., Lin,J., Yen,G., Schwartz,D.C.,
Welch,R.A. and Blattner,F.R.
TITLE Genome sequence of enterohaemorrhagic Escherichia coli O157:H7
JOURNAL Nature 409 (6819), 529-533 (2001)
PUBMED 11206551
REFERENCE 2 (bases 1 to 5528445)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (28-SEP-2001) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5528445)
AUTHORS Perna,N.T., Plunkett,G.III, Burland,V., Mau,B., Glasner,J.D.,
Rose,D.J., Mayhew,G.F., Evans,P.S., Gregor,J., Kirkpatrick,H.A.,
Posfai,G., Hackett,J., Klink,S., Boutin,A., Shao,Y., Miller,L.,
Grotbeck,E.J., Davis,N.W., Lim,A., Dimalanta,E., Potamousis,K.,
Apodaca,J., Anantharaman,T.S., Lin,J., Yen,G., Schwartz,D.C.,
Welch,R.A. and Blattner,F.R.
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2000) Laboratory of Genetics, University of
Wisconsin, 445 Henry Mall, Madison, WI 53706, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE005174.
On Oct 26, 2001 this sequence version replaced gi:15799680.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

227103 | 228644 | + | 1542 | 16445223 | Z0213 | - | 16S ribosomal RNA |

228713 | 228789 | + | 77 | 16445223 | Z0217 | - | 14 Ile tRNA
|

228832 | 228907 | + | 76 | 16445223 | Z0218 | - | 02 Ala tRNA
|

229091 | 231993 | + | 2903 | 16445223 | Z0219 | - | 23S ribosomal RNA |

232086 | 232205 | + | 120 | 16445223 | Z0226 | - | 5S ribosomal RNA |

232258 | 232334 | + | 77 | 16445223 | Z0228 | - | 06 Asp tRNA
|

240482 | 240558 | + | 77 | 16445223 | Z0242 | - | 06 Asp tRNA
|

299983 | 300058 | + | 76 | 16445223 | Z0305 | - | 12 Thr tRNA
|

402035 | 402115 | + | 81 | 16445223 | Z0422 | - | Xaa tRNA |

542492 | 542629 | + | 138 | 16445223 | Z0567 | - | 4.5S RNA; component of ribonucleoprotein |

656876 | 656952 | + | 77 | 16445223 | Z0695 | - | 11 Arg tRNA
|

776372 | 776446 | - | 75 | 16445223 | Z0813 | - | 05 Gln tRNA
|

776484 | 776558 | - | 75 | 16445223 | Z0814 | - | 05 Gln tRNA
|

776607 | 776683 | - | 77 | 16445223 | Z0815 | - | 16 Met tRNA
|

776699 | 776773 | - | 75 | 16445223 | Z0816 | - | 05 Gln tRNA
|

776808 | 776882 | - | 75 | 16445223 | Z0817 | - | 05 Gln tRNA
|

776906 | 776990 | - | 85 | 16445223 | Z0819 | - | 15 Leu tRNA
|

777001 | 777077 | - | 77 | 16445223 | Z0820 | - | 16 Met tRNA
|

866633 | 866708 | + | 76 | 16445223 | Z0911 | - | 10 Lys tRNA
|

866744 | 866819 | + | 76 | 16445223 | Z0912 | - | 13 Val tRNA
|

866822 | 866897 | + | 76 | 16445223 | Z0913 | - | 10 Lys tRNA
|

866949 | 867024 | + | 76 | 16445223 | Z0914 | - | 13 Val tRNA
|

867028 | 867103 | + | 76 | 16445223 | Z0915 | - | 10 Lys tRNA
|

867250 | 867325 | + | 76 | 16445223 | Z0917 | - | 10 Lys tRNA
|

1146184 | 1146271 | - | 88 | 16445223 | Z1227 | - | 08 Ser tRNA
|

1254955 | 1255006 | - | 52 | 16445223 | Z1327 | - | RNA similar to DicF encoded within cryptic prophage CP-933M |

1295563 | 1295650 | - | 88 | 16445223 | Z1388 | - | 08 Ser tRNA
|

1351948 | 1352023 | + | 76 | 16445223 | Z1461 | - | 14 Ile tRNA
|

1352033 | 1352109 | + | 77 | 16445223 | Z1462 | - | 11 Arg tRNA
|

1352123 | 1352199 | + | 77 | 16445223 | Z1463 | - | 11 Arg tRNA
|

1541790 | 1541877 | - | 88 | 16445223 | Z1665 | - | 08 Ser tRNA
|

1640997 | 1641072 | + | 76 | 16445223 | Z1790 | - | 14 Ile tRNA
|

1641170 | 1641246 | + | 77 | 16445223 | Z1792 | - | 11 Arg tRNA
|

1824225 | 1824309 | - | 85 | 16445223 | Z2006 | - | 18 Tyr tRNA
|

1824519 | 1824603 | - | 85 | 16445223 | Z2007 | - | 18 Tyr tRNA
|

1865882 | 1865957 | + | 76 | 16445223 | Z2061 | - | 14 Ile tRNA
|

1866038 | 1866114 | + | 77 | 16445223 | Z2062 | - | 11 Arg tRNA
|

2146344 | 2146420 | - | 77 | 16445223 | Z2380 | - | 11 Arg tRNA
|

2146521 | 2146596 | - | 76 | 16445223 | Z2381 | - | 14 Ile tRNA
|

2315774 | 2315847 | - | 74 | 16445223 | Z6057 | - | 11 Arg tRNA
|

2315864 | 2315937 | - | 74 | 16445223 | Z6058 | - | 11 Arg tRNA
|

2315948 | 2316020 | - | 73 | 16445223 | Z6059 | - | 14 Ile tRNA
|

2325955 | 2326007 | + | 53 | 16445223 | Z6077 | - | putative RNA identical to DicF encoded within cryptic prophage CP-933P |

2421342 | 2421418 | + | 77 | 16445223 | Z2692 | - | 13 Val tRNA
|

2421423 | 2421499 | + | 77 | 16445223 | Z2693 | - | 13 Val tRNA
|

2689298 | 2689384 | - | 87 | 16445223 | Z2997 | - | 15 Leu tRNA
|

2689397 | 2689470 | - | 74 | 16445223 | Z2998 | - | 19 Cys tRNA
|

2689524 | 2689599 | - | 76 | 16445223 | Z2999 | - | 01 Gly tRNA
|

2724987 | 2725081 | - | 95 | 16445223 | Z3044 | - | anti-sense RNA silencer of rcsA gene |

2774120 | 2774196 | - | 77 | 16445223 | Z3110 | - | 11 Arg tRNA
|

2774210 | 2774286 | - | 77 | 16445223 | Z3112 | - | 11 Arg tRNA
|

2774294 | 2774369 | - | 76 | 16445223 | Z3113 | - | 14 Ile tRNA
|

2788401 | 2788490 | - | 90 | 16445223 | Z3131 | - | 08 Ser tRNA
|

2789482 | 2789557 | + | 76 | 16445223 | Z3133 | - | 07 Asn tRNA
|

2803862 | 2803937 | - | 76 | 16445223 | Z3141 | - | 07 Asn tRNA
|

2805686 | 2805761 | + | 76 | 16445223 | Z3145 | - | 07 Asn tRNA
|

2808094 | 2808169 | + | 76 | 16445223 | Z3149 | - | 07 Asn tRNA
|

3092410 | 3092486 | + | 77 | 16445223 | Z3448 | - | 03 Pro tRNA
|

3262864 | 3262938 | + | 75 | 16445223 | Z3612 | - | 11 Arg tRNA
|

3314784 | 3314859 | - | 76 | 16445223 | Z3661 | - | 02 Ala tRNA
|

3319306 | 3319381 | + | 76 | 16445223 | Z3667 | - | 13 Val tRNA
|

3319426 | 3319501 | + | 76 | 16445223 | Z3668 | - | 13 Val tRNA
|

3319548 | 3319623 | + | 76 | 16445223 | Z3669 | - | 13 Val tRNA
|

3319628 | 3319703 | + | 76 | 16445223 | Z3670 | - | 10 Lys tRNA
|

3516104 | 3516223 | - | 120 | 16445223 | Z3874 | - | 5S ribosomal RNA |

3516316 | 3519223 | - | 2908 | 16445223 | Z3875 | - | 23S ribosomal RNA |

3519417 | 3519492 | - | 76 | 16445223 | Z3881 | - | 04 Glu tRNA
|

3519578 | 3521124 | - | 1547 | 16445223 | Z3882 | - | 16S ribosomal RNA |

3545346 | 3545811 | + | 466 | 16445223 | Z3914 | - | 10Sa RNA (tmRNA); tags incomplete translation products for degradation |

3575237 | 3575312 | - | 76 | 16445223 | Z3952 | - | 14 Ile tRNA
|

3609232 | 3609308 | - | 77 | 16445223 | Z3992 | - | 11 Arg tRNA
|

3609411 | 3609487 | - | 77 | 16445223 | Z3993 | - | 11 Arg tRNA
|

3609550 | 3609626 | - | 77 | 16445223 | Z3995 | - | 11 Arg tRNA
|

3609691 | 3609767 | - | 77 | 16445223 | Z3996 | - | 11 Arg tRNA
|

3609771 | 3609864 | - | 94 | 16445223 | Z3997 | - | 08 Ser tRNA
|

3737085 | 3737161 | + | 77 | 16445223 | Z4131 | - | 16 Met tRNA
|

3737195 | 3737271 | + | 77 | 16445223 | Z4132 | - | 16 Met tRNA
|

3737305 | 3737381 | + | 77 | 16445223 | Z4133 | - | 16 Met tRNA
|

3804619 | 3804692 | - | 74 | 16445223 | Z4202 | - | 01 Gly tRNA
|

3860419 | 3860602 | + | 184 | 16445223 | Z4248 | - | 6S RNA |

3919272 | 3919347 | + | 76 | 16445223 | Z4312 | - | 17 Phe tRNA
|

3955129 | 3955204 | + | 76 | - | 16 Met tRNA Добавленно
| ||

4022444 | 4022519 | + | 76 | 16445223 | Z4422 | - | 16 Met tRNA Неверная идентификация
|

4076667 | 4077043 | - | 377 | 16445223 | Z4475 | - | RNase P, RNA component; M1 RNA; processes tRNA, |

4127927 | 4128003 | - | 77 | 16445223 | Z4532 | - | 16 Met tRNA
|

4131786 | 4131872 | - | 87 | 16445223 | Z4536 | - | 15 Leu tRNA
|

4225646 | 4225765 | - | 120 | 16445223 | Z4633 | - | 5S ribosomal RNA |

4225803 | 4225878 | - | 76 | 16445223 | Z4635 | - | 12 Thr tRNA
|

4225891 | 4226010 | - | 120 | 16445223 | Z4636 | - | 5S ribosomal RNA |

4226104 | 4229009 | - | 2906 | 16445223 | Z4637 | - | 23S ribosomal RNA |

4229193 | 4229268 | - | 76 | 16445223 | Z4643 | - | 02 Ala tRNA
|

4229311 | 4229387 | - | 77 | 16445223 | Z4644 | - | 14 Ile tRNA
|

4229456 | 4230997 | - | 1542 | 16445223 | Z4645 | - | 16S ribosomal RNA |

4517666 | 4517742 | - | 77 | 16445223 | Z4963 | - | 03 Pro tRNA
|

4649752 | 4649842 | + | 91 | 16445223 | Z5086 | - | Sec tRNA |

4804233 | 4805773 | + | 1541 | 16445223 | Z5259 | - | 16S ribosomal RNA |

4805859 | 4805934 | + | 76 | 16445223 | Z5263 | - | 04 Glu tRNA
|

4806128 | 4809032 | + | 2905 | 16445223 | Z5264 | - | 23S ribosomal RNA |

4809125 | 4809244 | + | 120 | 16445223 | Z5271 | - | 5S ribosomal RNA |

4809297 | 4809373 | + | 77 | 16445223 | Z5273 | - | 06 Asp tRNA
|

4809382 | 4809457 | + | 76 | 16445223 | Z5274 | - | 20 Trp tRNA
|

4844766 | 4844842 | + | 77 | 16445223 | Z5308 | - | 11 Arg tRNA
|

4844900 | 4844976 | + | 77 | 16445223 | Z5310 | - | 09 His tRNA
|

4844997 | 4845083 | + | 87 | 16445223 | Z5311 | - | 15 Leu tRNA
|

4845126 | 4845202 | + | 77 | 16445223 | Z5312 | - | 03 Pro tRNA
|

4900418 | 4901959 | + | 1542 | 16445223 | Z5373 | - | 16S ribosomal RNA |

4902028 | 4902104 | + | 77 | 16445223 | Z5377 | - | 14 Ile tRNA
|

4902147 | 4902222 | + | 76 | 16445223 | Z5378 | - | 02 Ala tRNA
|

4902406 | 4905310 | + | 2905 | 16445223 | Z5379 | - | 23S ribosomal RNA |

4905403 | 4905522 | + | 120 | 16445223 | Z5386 | - | 5S ribosomal RNA |

4914616 | 4914724 | + | 109 | 16445223 | Z5399 | - | spot 42 RNA, inhibition of DNA synthesis |

5044690 | 5046231 | + | 1542 | 16445223 | Z5529 | - | 16S ribosomal RNA |

5046317 | 5046392 | + | 76 | 16445223 | Z5533 | - | 04 Glu tRNA
|

5046586 | 5049490 | + | 2905 | 16445223 | Z5534 | - | 23S ribosomal RNA |

5049583 | 5049702 | + | 120 | 16445223 | Z5541 | - | 5S ribosomal RNA |

5053151 | 5053226 | + | 76 | 16445223 | Z5548 | - | 12 Thr tRNA
|

5053235 | 5053319 | + | 85 | 16445223 | Z5550 | - | 18 Tyr tRNA
|

5053436 | 5053510 | + | 75 | 16445223 | Z5551 | - | 01 Gly tRNA
|

5053517 | 5053592 | + | 76 | 16445223 | Z5552 | - | 12 Thr tRNA
|

5085699 | 5087240 | + | 1542 | 16445223 | Z5585 | - | 16S ribosomal RNA |

5087326 | 5087401 | + | 76 | 16445223 | Z5588 | - | 04 Glu tRNA
|

5087595 | 5090497 | + | 2903 | 16445223 | Z5589 | - | 23S ribosomal RNA |

5090590 | 5090709 | + | 120 | 16445223 | Z5596 | - | 5S ribosomal RNA |

5246987 | 5247062 | - | 76 | 16445223 | Z5738 | - | 17 Phe tRNA
|

5276070 | 5276145 | + | 76 | 16445223 | Z5770 | - | 01 Gly tRNA
|

5276182 | 5276257 | + | 76 | 16445223 | Z5771 | - | 01 Gly tRNA
|

5276293 | 5276368 | + | 76 | 16445223 | Z5772 | - | 01 Gly tRNA
|

5377002 | 5377086 | + | 85 | 16445223 | Z5877 | - | 15 Leu tRNA
|

5494433 | 5494519 | - | 87 | 16445223 | Z5971 | - | 15 Leu tRNA
|