Материалы:NC 005139

```
LOCUS NC_005139 3354505 bp DNA circular BCT 03-APR-2006
DEFINITION Vibrio vulnificus YJ016 chromosome I, complete sequence.
ACCESSION NC_005139
VERSION NC_005139.1 GI:37678184
KEYWORDS .
SOURCE Vibrio vulnificus YJ016
ORGANISM Vibrio vulnificus YJ016
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
Vibrionaceae; Vibrio.
REFERENCE 1 (bases 1 to 3354505)
AUTHORS Chen,C.Y., Wu,K.M., Chang,Y.C., Chang,C.H., Tsai,H.C., Liao,T.L.,
Liu,Y.M., Chen,H.J., Shen,A.B., Li,J.C., Su,T.L., Shao,C.P.,
Lee,C.T., Hor,L.I. and Tsai,S.F.
TITLE Comparative genome analysis of Vibrio vulnificus, a marine pathogen
JOURNAL Genome Res. 13 (12), 2577-2587 (2003)
PUBMED 14656965
REFERENCE 2 (bases 1 to 3354505)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 3354505)
CONSRTM NCBI Microbial Genomes Annotation Project
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2002) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BA000037.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

32728 | 34262 | + | 1535 | 37678184 | VVr001 | - | 16S ribosomal RNA |

34326 | 34402 | + | 77 | 37678184 | VVt001 | - | 14 Ile tRNA
|

34413 | 34488 | + | 76 | 37678184 | VVt002 | - | 02 Ala tRNA
|

34770 | 37657 | + | 2888 | 37678184 | VVr002 | - | 23S ribosomal RNA |

37812 | 37929 | + | 118 | 37678184 | VVr003 | - | 5S ribosomal RNA |

38032 | 38122 | + | 91 | 37678184 | VVt003 | - | 08 Ser tRNA
|

49176 | 49252 | + | 77 | 37678184 | VVt004 | - | 11 Arg tRNA
|

49291 | 49366 | + | 76 | 37678184 | VVt005 | - | 09 His tRNA
|

49393 | 49469 | + | 77 | 37678184 | VVt006 | - | 03 Pro tRNA
|

49544 | 49619 | + | 76 | 37678184 | VVt007 | - | 09 His tRNA
|

49644 | 49720 | + | 77 | 37678184 | VVt008 | - | 03 Pro tRNA
|

177895 | 179429 | + | 1535 | 37678184 | VVr004 | - | 16S ribosomal RNA |

179498 | 179573 | + | 76 | 37678184 | VVt009 | - | 04 Glu tRNA
|

179575 | 179650 | + | 76 | 37678184 | VVt010 | - | 10 Lys tRNA
|

179665 | 179740 | + | 76 | 37678184 | VVt011 | - | 02 Ala tRNA
|

179755 | 179830 | + | 76 | 37678184 | VVt012 | - | 13 Val tRNA
|

180171 | 183058 | + | 2888 | 37678184 | VVr005 | - | 23S ribosomal RNA |

183180 | 183297 | + | 118 | 37678184 | VVr006 | - | 5S ribosomal RNA |

183328 | 183404 | + | 77 | 37678184 | VVt013 | - | 06 Asp tRNA
|

542304 | 542379 | - | 76 | 37678184 | VVt014 | - | 16 Met tRNA
|

589305 | 589747 | + | 443 | 37678184 | VVs001 | - | RNA subunit of RNase P |

717240 | 718774 | + | 1535 | 37678184 | VVr007 | - | 16S ribosomal RNA |

718843 | 718918 | + | 76 | 37678184 | VVt015 | - | 04 Glu tRNA
|

718920 | 718995 | + | 76 | 37678184 | VVt016 | - | 10 Lys tRNA
|

719024 | 719099 | + | 76 | 37678184 | VVt017 | - | 13 Val tRNA
|

719439 | 722326 | + | 2888 | 37678184 | VVr008 | - | 23S ribosomal RNA |

722447 | 722564 | + | 118 | 37678184 | VVr009 | - | 5S ribosomal RNA |

722596 | 722672 | + | 77 | 37678184 | VVt018 | - | 06 Asp tRNA
|

722742 | 722818 | + | 77 | 37678184 | VVt019 | - | 20 Trp tRNA
|

823056 | 823422 | - | 367 | 37678184 | VVs002 | - | tmRNA |

923519 | 923603 | - | 85 | 37678184 | VVt020 | - | 15 Leu tRNA
|

923648 | 923722 | - | 75 | 37678184 | VVt021 | - | 05 Gln tRNA
|

923779 | 923863 | - | 85 | 37678184 | VVt022 | - | 15 Leu tRNA
|

923909 | 923983 | - | 75 | 37678184 | VVt023 | - | 05 Gln tRNA
|

924039 | 924123 | - | 85 | 37678184 | VVt024 | - | 15 Leu tRNA
|

924168 | 924242 | - | 75 | 37678184 | VVt025 | - | 05 Gln tRNA
|

924297 | 924381 | - | 85 | 37678184 | VVt026 | - | 15 Leu tRNA
|

924426 | 924502 | - | 77 | 37678184 | VVt027 | - | 16 Met tRNA
|

924514 | 924598 | - | 85 | 37678184 | VVt028 | - | 15 Leu tRNA
|

924644 | 924718 | - | 75 | 37678184 | VVt029 | - | 05 Gln tRNA
|

924776 | 924860 | - | 85 | 37678184 | VVt030 | - | 15 Leu tRNA
|

924903 | 924979 | - | 77 | 37678184 | VVt031 | - | 16 Met tRNA
|

925057 | 925131 | - | 75 | 37678184 | VVt032 | - | 05 Gln tRNA
|

925142 | 925226 | - | 85 | 37678184 | VVt033 | - | 15 Leu tRNA
|

925265 | 925341 | - | 77 | 37678184 | VVt034 | - | 16 Met tRNA
|

940448 | 940524 | + | 77 | 37678184 | VVt035 | - | 03 Pro tRNA
|

952546 | 952622 | - | 77 | 37678184 | VVt036 | - | 11 Arg tRNA
|

1067577 | 1067653 | - | 77 | 37678184 | VVt037 | - | 03 Pro tRNA
|

1135031 | 1135115 | - | 85 | 37678184 | VVt038 | - | 18 Tyr tRNA
|

1150964 | 1151074 | + | 111 | 37678184 | VVs003 | - | signal recognition particle RNA |

1179024 | 1179114 | - | 91 | 37678184 | VVt039 | - | 08 Ser tRNA
|

1208714 | 1208789 | - | 76 | 37678184 | VVt040 | - | 07 Asn tRNA
|

1249797 | 1249870 | + | 74 | 37678184 | VVt041 | - | 19 Cys tRNA
|

1249874 | 1249949 | + | 76 | 37678184 | VVt042 | - | 01 Gly tRNA
|

1250010 | 1250096 | + | 87 | 37678184 | VVt043 | - | 15 Leu tRNA
|

1250122 | 1250197 | + | 76 | 37678184 | VVt044 | - | 01 Gly tRNA
|

1535714 | 1535790 | + | 77 | 37678184 | VVt045 | - | 13 Val tRNA
|

1535826 | 1535902 | + | 77 | 37678184 | VVt046 | - | 13 Val tRNA
|

2281999 | 2282086 | - | 88 | 37678184 | VVt047 | - | 08 Ser tRNA
|

2426246 | 2426322 | - | 77 | 37678184 | VVt048 | - | 11 Arg tRNA
|

2751165 | 2751241 | - | 77 | 37678184 | VVt049 | - | 16 Met tRNA
|

2751299 | 2751382 | - | 84 | 37678184 | VVt050 | - | 15 Leu tRNA
|

2857088 | 2857164 | - | 77 | 37678184 | VVt051 | - | 11 Arg tRNA
|

2857207 | 2857283 | - | 77 | 37678184 | VVt052 | - | 11 Arg tRNA
|

2857373 | 2857449 | - | 77 | 37678184 | VVt053 | - | 11 Arg tRNA
|

2857494 | 2857570 | - | 77 | 37678184 | VVt054 | - | 11 Arg tRNA
|

2857661 | 2857737 | - | 77 | 37678184 | VVt055 | - | 11 Arg tRNA
|

2857822 | 2857913 | - | 92 | 37678184 | VVt056 | - | 08 Ser tRNA
|

2857937 | 2858013 | - | 77 | 37678184 | VVt057 | - | 11 Arg tRNA
|

2858043 | 2858134 | - | 92 | 37678184 | VVt058 | - | 08 Ser tRNA
|

2938124 | 2938199 | + | 76 | 37678184 | VVt059 | - | 17 Phe tRNA
|

2938254 | 2938329 | + | 76 | 37678184 | VVt060 | - | 12 Thr tRNA
|

2938344 | 2938419 | + | 76 | 37678184 | VVt061 | - | 07 Asn tRNA
|

2940513 | 2940588 | + | 76 | 37678184 | VVt062 | - | 17 Phe tRNA
|

2940647 | 2940722 | + | 76 | 37678184 | VVt063 | - | 12 Thr tRNA
|

2940730 | 2940805 | + | 76 | 37678184 | VVt064 | - | 17 Phe tRNA
|

2940845 | 2940920 | + | 76 | 37678184 | VVt065 | - | 07 Asn tRNA
|

2940956 | 2941031 | + | 76 | 37678184 | VVt066 | - | 12 Thr tRNA
|

2941072 | 2941147 | + | 76 | 37678184 | VVt067 | - | 07 Asn tRNA
|

2942997 | 2943073 | - | 77 | 37678184 | VVt068 | - | 06 Asp tRNA
|

2943137 | 2943254 | - | 118 | 37678184 | VVr010 | - | 5S ribosomal RNA |

2943261 | 2943336 | - | 76 | 37678184 | VVt069 | - | 12 Thr tRNA
|

2943386 | 2943503 | - | 118 | 37678184 | VVr011 | - | 5S ribosomal RNA |

2943624 | 2946511 | - | 2888 | 37678184 | VVr012 | - | 23S ribosomal RNA |

2946788 | 2946863 | - | 76 | 37678184 | VVt070 | - | 04 Glu tRNA
|

2946932 | 2948466 | - | 1535 | 37678184 | VVr013 | - | 16S ribosomal RNA |

2948802 | 2948919 | - | 118 | 37678184 | VVr014 | - | 5S ribosomal RNA |

2949041 | 2951928 | - | 2888 | 37678184 | VVr015 | - | 23S ribosomal RNA |

2952269 | 2952344 | - | 76 | 37678184 | VVt071 | - | 13 Val tRNA
|

2952359 | 2952434 | - | 76 | 37678184 | VVt072 | - | 02 Ala tRNA
|

2952449 | 2952524 | - | 76 | 37678184 | VVt073 | - | 10 Lys tRNA
|

2952526 | 2952601 | - | 76 | 37678184 | VVt074 | - | 04 Glu tRNA
|

2952670 | 2954200 | - | 1531 | 37678184 | VVr016 | - | 16S ribosomal RNA |

2963615 | 2963699 | - | 85 | 37678184 | VVt075 | - | 15 Leu tRNA
|

3037536 | 3037612 | - | 77 | 37678184 | VVt076 | - | 20 Trp tRNA
|

3037666 | 3037742 | - | 77 | 37678184 | VVt077 | - | 06 Asp tRNA
|

3037774 | 3037891 | - | 118 | 37678184 | VVr017 | - | 5S ribosomal RNA |

3038013 | 3040900 | - | 2888 | 37678184 | VVr018 | - | 23S ribosomal RNA |

3041180 | 3041255 | - | 76 | 37678184 | VVt078 | - | 02 Ala tRNA
|

3041266 | 3041342 | - | 77 | 37678184 | VVt079 | - | 14 Ile tRNA
|

3041406 | 3042940 | - | 1535 | 37678184 | VVr019 | - | 16S ribosomal RNA |

3160255 | 3160331 | - | 77 | 37678184 | VVt080 | - | 16 Met tRNA
|

3160374 | 3160450 | - | 77 | 37678184 | VVt081 | - | 16 Met tRNA
|

3160492 | 3160568 | - | 77 | 37678184 | VVt082 | - | 16 Met tRNA
|

3160611 | 3160687 | - | 77 | 37678184 | VVt083 | - | 16 Met tRNA
|

3160741 | 3160816 | - | 76 | 37678184 | VVt084 | - | 01 Gly tRNA
|

3160851 | 3160927 | - | 77 | 37678184 | VVt085 | - | 16 Met tRNA
|

3160982 | 3161057 | - | 76 | 37678184 | VVt086 | - | 01 Gly tRNA
|

3161154 | 3161229 | - | 76 | 37678184 | VVt087 | - | 01 Gly tRNA
|

3161325 | 3161400 | - | 76 | 37678184 | VVt088 | - | 01 Gly tRNA
|

3161434 | 3161509 | - | 76 | 37678184 | VVt089 | - | 01 Gly tRNA
|

3161620 | 3161695 | - | 76 | 37678184 | VVt090 | - | 01 Gly tRNA
|

3251167 | 3251242 | - | 76 | 37678184 | VVt091 | - | 12 Thr tRNA
|

3251257 | 3251331 | - | 75 | 37678184 | VVt092 | - | 01 Gly tRNA
|

3251367 | 3251451 | - | 85 | 37678184 | VVt093 | - | 18 Tyr tRNA
|

3251499 | 3251574 | - | 76 | 37678184 | VVt094 | - | 12 Thr tRNA
|

3257793 | 3257869 | - | 77 | 37678184 | VVt095 | - | 06 Asp tRNA
|

3257901 | 3258018 | - | 118 | 37678184 | VVr020 | - | 5S ribosomal RNA |

3258139 | 3261026 | - | 2888 | 37678184 | VVr021 | - | 23S ribosomal RNA |

3261303 | 3261378 | - | 76 | 37678184 | VVt096 | - | 13 Val tRNA
|

3261407 | 3261482 | - | 76 | 37678184 | VVt097 | - | 10 Lys tRNA
|

3261484 | 3261559 | - | 76 | 37678184 | VVt098 | - | 04 Glu tRNA
|

3261628 | 3263162 | - | 1535 | 37678184 | VVr022 | - | 16S ribosomal RNA |

3299776 | 3299852 | - | 77 | 37678184 | VVt099 | - | 06 Asp tRNA
|

3299884 | 3300001 | - | 118 | 37678184 | VVr023 | - | 5S ribosomal RNA |

3300125 | 3303012 | - | 2888 | 37678184 | VVr024 | - | 23S ribosomal RNA |

3303289 | 3303364 | - | 76 | 37678184 | VVt100 | - | 04 Glu tRNA
|

3303433 | 3304967 | - | 1535 | 37678184 | VVr025 | - | 16S ribosomal RNA |