Материалы:NC 009667

LOCUS NC_009667 2887297 bp DNA circular BCT 25-JUL-2007 DEFINITION Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence. ACCESSION NC_009667 VERSION NC_009667.1 GI:153007346 KEYWORDS . SOURCE Ochrobactrum anthropi ATCC 49188 ORGANISM Ochrobactrum anthropi ATCC 49188 Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum. REFERENCE 1 (bases 1 to 2887297) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Garcia,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome 1 of Ochrobactrum anthropi ATCC 49188 JOURNAL Unpublished REFERENCE 2 (bases 1 to 2887297) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Garcia,E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (10-JUL-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA REFERENCE 3 (bases 1 to 2887297) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (03-JUL-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000758. URL -- http://www.jgi.doe.gov JGI Project ID: 2773013 Source DNA available from Emilio Garcia (garcia12@llnl.gov) Bacteria available from ATCC: ATCC 49188 Contacts: Emilio Garcia (garcia12@llnl.gov) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Additional Note: This projects consists of 2 chromosomes and 4 plasmids. COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

21484 | 21589 | + | 106 | 153007346 | Oant_R0001 | - | SRP RNA; RNA component of signal recognition particle |

34671 | 34746 | + | 76 | 153007346 | Oant_R0002 | - | 02 Ala tRNA
|

224559 | 224635 | + | 77 | 153007346 | Oant_R0003 | - | 03 Pro tRNA
|

338356 | 338431 | - | 76 | 153007346 | Oant_R0004 | - | 17 Phe tRNA
|

344746 | 344820 | + | 75 | 153007346 | Oant_R0005 | - | 12 Thr tRNA
|

353496 | 353572 | - | 77 | 153007346 | Oant_R0006 | - | 11 Arg tRNA
|

726699 | 726773 | + | 75 | 153007346 | Oant_R0007 | - | 05 Gln tRNA
|

935321 | 935397 | - | 77 | 153007346 | Oant_R0008 | - | 11 Arg tRNA
|

1051227 | 1051311 | - | 85 | 153007346 | Oant_R0009 | - | 15 Leu tRNA
|

1084028 | 1085503 | + | 1476 | 153007346 | Oant_R0010 | - | 16S ribosomal RNA |

1085777 | 1085853 | + | 77 | 153007346 | Oant_R0011 | - | 14 Ile tRNA
|

1085865 | 1085940 | + | 76 | 153007346 | Oant_R0012 | - | 02 Ala tRNA
|

1086513 | 1089117 | + | 2605 | 153007346 | Oant_R0013 | - | 23S ribosomal RNA |

1089314 | 1089427 | + | 114 | 153007346 | Oant_R0014 | - | 5S ribosomal RNA |

1089481 | 1089557 | + | 77 | 153007346 | Oant_R0015 | - | 16 Met tRNA
|

1096920 | 1097009 | - | 90 | 153007346 | Oant_R0016 | - | 08 Ser tRNA
|

1312035 | 1312109 | + | 75 | 153007346 | Oant_R0017 | - | 04 Glu tRNA
|

1346251 | 1347726 | + | 1476 | 153007346 | Oant_R0018 | - | 16S ribosomal RNA |

1348000 | 1348076 | + | 77 | 153007346 | Oant_R0019 | - | 14 Ile tRNA
|

1348088 | 1348163 | + | 76 | 153007346 | Oant_R0020 | - | 02 Ala tRNA
|

1348736 | 1351340 | + | 2605 | 153007346 | Oant_R0021 | - | 23S ribosomal RNA |

1351537 | 1351650 | + | 114 | 153007346 | Oant_R0022 | - | 5S ribosomal RNA |

1351704 | 1351780 | + | 77 | 153007346 | Oant_R0023 | - | 16 Met tRNA
|

1355690 | 1355764 | - | 75 | 153007346 | Oant_R0024 | - | 01 Gly tRNA
|

1388802 | 1388891 | - | 90 | 153007346 | Oant_R0025 | - | 08 Ser tRNA
|

1405999 | 1406085 | - | 87 | 153007346 | Oant_R0026 | - | 15 Leu tRNA
|

1640246 | 1640322 | - | 77 | 153007346 | Oant_R0027 | - | 16 Met tRNA
|

1779957 | 1780033 | + | 77 | 153007346 | Oant_R0028 | - | 16 Met tRNA
|

1818979 | 1819342 | + | 364 | 153007346 | Oant_R0029 | - | RNA component of RNaseP |

1881787 | 1882116 | - | 330 | 153007346 | Oant_R0030 | - | tmRNA |

1947096 | 1947171 | - | 76 | 153007346 | Oant_R0031 | - | 10 Lys tRNA
|

2015201 | 2015275 | - | 75 | 153007346 | Oant_R0032 | - | 04 Glu tRNA
|

2015422 | 2015496 | - | 75 | 153007346 | Oant_R0033 | - | 04 Glu tRNA
|

2040545 | 2040629 | + | 85 | 153007346 | Oant_R0034 | - | 18 Tyr tRNA
|

2040654 | 2040727 | + | 74 | 153007346 | Oant_R0035 | - | 01 Gly tRNA
|

2042108 | 2042183 | + | 76 | 153007346 | Oant_R0036 | - | 20 Trp tRNA
|

2168687 | 2168760 | - | 74 | 153007346 | Oant_R0037 | - | 01 Gly tRNA
|

2245163 | 2245248 | - | 86 | 153007346 | Oant_R0038 | - | 15 Leu tRNA
|

2269141 | 2269225 | + | 85 | 153007346 | Oant_R0039 | - | 15 Leu tRNA
|

2333924 | 2334000 | - | 77 | 153007346 | Oant_R0040 | - | 11 Arg tRNA
|

2342165 | 2342239 | - | 75 | 153007346 | Oant_R0041 | - | 13 Val tRNA
|

2370594 | 2370669 | + | 76 | 153007346 | Oant_R0042 | - | 12 Thr tRNA
|

2443445 | 2443519 | - | 75 | 153007346 | Oant_R0043 | - | 16 Met tRNA
|

2451468 | 2451550 | - | 83 | 153007346 | Oant_R0044 | - | 15 Leu tRNA
|

2550612 | 2550688 | - | 77 | 153007346 | Oant_R0045 | - | 06 Asp tRNA
|

2550934 | 2551010 | - | 77 | 153007346 | Oant_R0046 | - | 06 Asp tRNA
|

2606733 | 2606808 | - | 76 | 153007346 | Oant_R0047 | - | 13 Val tRNA
|

2641458 | 2641534 | + | 77 | 153007346 | Oant_R0048 | - | 03 Pro tRNA
|

2697238 | 2697314 | - | 77 | 153007346 | Oant_R0049 | - | 11 Arg tRNA
|

2697900 | 2697976 | - | 77 | 153007346 | Oant_R0050 | - | 03 Pro tRNA
|

2773282 | 2773372 | + | 91 | 153007346 | Oant_R0051 | - | 08 Ser tRNA
|