Материалы:NC 004631

```
LOCUS NC_004631 4791961 bp DNA circular BCT 14-DEC-2006
DEFINITION Salmonella enterica subsp. enterica serovar Typhi Ty2, complete
genome.
ACCESSION NC_004631
VERSION NC_004631.1 GI:29140543
KEYWORDS .
SOURCE Salmonella enterica subsp. enterica serovar Typhi Ty2
ORGANISM Salmonella enterica subsp. enterica serovar Typhi Ty2
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Salmonella; Salmonella enterica subsp. enterica
serovar Typhi.
REFERENCE 1 (bases 1 to 4791961)
AUTHORS Deng,W., Liou,S.R., Plunkett III,G., Mayhew,G.F., Rose,D.J.,
Burland,V., Kodoyianni,V., Schwartz,D.C. and Blattner,F.R.
TITLE Comparative Genomics of Salmonella enterica Serovar Typhi Strains
Ty2 and CT18
JOURNAL J. Bacteriol. 185 (7), 2330-2337 (2003)
PUBMED 12644504
REFERENCE 2 (bases 1 to 4791961)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 4791961)
AUTHORS Deng,W., Liou,S.-R., Plunkett,G. III, Mayhew,G.F., Rose,D.J.,
Burland,V., Kodoyianni,V., Schwartz,D.C. and Blattner,F.R.
TITLE Direct Submission
JOURNAL Submitted (25-SEP-2002) Laboratory of Genetics, University of
Wisconsin - Madison, 445 Henry Mall, Madison, WI 53706, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE014613.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

287477 | 289010 | + | 1534 | 29140543 | t0252 | - | 16S ribosomal RNA |

289097 | 289172 | + | 76 | 29140543 | t0253 | - | 04 Glu tRNA
|

289366 | 292371 | + | 3006 | 29140543 | t0254 | - | 23S ribosomal RNA |

292472 | 292591 | + | 120 | 29140543 | t4650 | - | 5S ribosomal RNA |

511872 | 511947 | - | 76 | 29140543 | t0438 | - | 10 Lys tRNA
|

511952 | 512027 | - | 76 | 29140543 | t0439 | - | 13 Val tRNA
|

512069 | 512144 | - | 76 | 29140543 | t0440 | - | 13 Val tRNA
|

512190 | 512265 | - | 76 | 29140543 | t0441 | - | 13 Val tRNA
|

514971 | 515046 | + | 76 | 29140543 | t0445 | - | 02 Ala tRNA
|

515089 | 515164 | + | 76 | 29140543 | t0446 | - | 02 Ala tRNA
|

543845 | 543919 | - | 75 | 29140543 | t0470 | - | 11 Arg tRNA
|

680758 | 681114 | - | 357 | 29140543 | t4642 | - | MicF RNA; post-transcriptional regulator of ompF gene |

707497 | 707573 | - | 77 | 29140543 | t0625 | - | 03 Pro tRNA
|

951127 | 951202 | - | 76 | 29140543 | t0861 | - | 07 Asn tRNA
|

952960 | 953035 | + | 76 | 29140543 | t0863 | - | 07 Asn tRNA
|

978952 | 979027 | - | 76 | 29140543 | t0873 | - | 07 Asn tRNA
|

979575 | 979650 | - | 76 | 29140543 | t0876 | - | 07 Asn tRNA
|

980637 | 980726 | + | 90 | 29140543 | t0878 | - | 08 Ser tRNA
|

994136 | 994216 | + | 81 | 29140543 | t4641 | - | DsrA RNA |

1026594 | 1026669 | + | 76 | 29140543 | t0932 | - | 01 Gly tRNA
|

1026722 | 1026795 | + | 74 | 29140543 | t0933 | - | 19 Cys tRNA
|

1026807 | 1026893 | + | 87 | 29140543 | t0934 | - | 15 Leu tRNA
|

1200360 | 1200436 | + | 77 | 29140543 | t1121 | - | 11 Arg tRNA
|

1212819 | 1212895 | + | 77 | 29140543 | t1140 | - | 11 Arg tRNA
|

1356053 | 1356129 | - | 77 | 29140543 | t1291 | - | 13 Val tRNA
|

1356140 | 1356216 | - | 77 | 29140543 | t1292 | - | 13 Val tRNA
|

1846078 | 1846165 | + | 88 | 29140543 | t1786 | - | 08 Ser tRNA
|

1895658 | 1895745 | - | 88 | 29140543 | t1833 | - | 08 Ser tRNA
|

2043010 | 2043097 | + | 88 | 29140543 | t1984 | - | 08 Ser tRNA
|

2187114 | 2187189 | - | 76 | 29140543 | t2123 | - | 10 Lys tRNA
|

2187324 | 2187399 | - | 76 | 29140543 | t2124 | - | 10 Lys tRNA
|

2187542 | 2187617 | - | 76 | 29140543 | t2125 | - | 10 Lys tRNA
|

2266374 | 2266450 | + | 77 | 29140543 | t2196 | - | 16 Met tRNA
|

2266459 | 2266543 | + | 85 | 29140543 | t2197 | - | 15 Leu tRNA
|

2266567 | 2266641 | + | 75 | 29140543 | t2198 | - | 05 Gln tRNA
|

2266677 | 2266751 | + | 75 | 29140543 | t2199 | - | 05 Gln tRNA
|

2266767 | 2266843 | + | 77 | 29140543 | t2200 | - | 16 Met tRNA
|

2266890 | 2266964 | + | 75 | 29140543 | t2201 | - | 05 Gln tRNA
|

2375510 | 2375586 | - | 77 | 29140543 | t2310 | - | 11 Arg tRNA
|

2463704 | 2463841 | - | 138 | 29140543 | t4640 | - | 4.5S RNA; component of signal recognition particle |

2602939 | 2603014 | - | 76 | 29140543 | t2527 | - | 12 Thr tRNA
|

2677913 | 2677989 | - | 77 | 29140543 | t2600 | - | 06 Asp tRNA
|

2687352 | 2687428 | - | 77 | 29140543 | t2611 | - | 06 Asp tRNA
|

2687481 | 2687600 | - | 120 | 29140543 | t4649 | - | 5S ribosomal RNA |

2687701 | 2690706 | - | 3006 | 29140543 | t2612 | - | 23S ribosomal RNA |

2690889 | 2690964 | - | 76 | 29140543 | t2613 | - | 02 Ala tRNA
|

2691076 | 2691152 | - | 77 | 29140543 | t2614 | - | 14 Ile tRNA
|

2691223 | 2692757 | - | 1535 | 29140543 | t2615 | - | 16S ribosomal RNA |

2734381 | 2734847 | + | 467 | 29140543 | t4643 | - | 10Sa tmRNA |

2808679 | 2808755 | - | 77 | 29140543 | t2719 | - | 11 Arg tRNA
|

2808952 | 2809028 | - | 77 | 29140543 | t2721 | - | 11 Arg tRNA
|

2809091 | 2809167 | - | 77 | 29140543 | t2723 | - | 11 Arg tRNA
|

2809230 | 2809307 | - | 78 | 29140543 | t2725 | - | 11 Arg tRNA
|

2809311 | 2809403 | - | 93 | 29140543 | t2726 | - | 08 Ser tRNA
|

2958127 | 2958482 | - | 356 | 29140543 | t4644 | - | CsrB RNA |

2982496 | 2982572 | + | 77 | 29140543 | t2897 | - | 16 Met tRNA
|

2982602 | 2982678 | + | 77 | 29140543 | t2898 | - | 16 Met tRNA
|

3045439 | 3045512 | - | 74 | 29140543 | t2955 | - | 01 Gly tRNA
|

3070118 | 3070300 | + | 183 | 29140543 | t4645 | - | 6S RNA |

3118025 | 3118100 | + | 76 | 29140543 | t3029 | - | 17 Phe tRNA
|

3221999 | 3222074 | + | 76 | 29140543 | t3133 | - | 14 Ile tRNA
|

3257454 | 3257829 | - | 376 | 29140543 | t4646 | - | M1 RNA |

3299809 | 3299885 | - | 77 | 29140543 | t3207 | - | 16 Met tRNA
|

3301770 | 3301856 | - | 87 | 29140543 | t3209 | - | 15 Leu tRNA
|

3403433 | 3403552 | - | 120 | 29140543 | t4656 | - | 5S ribosomal RNA |

3403590 | 3403665 | - | 76 | 29140543 | t3306 | - | 12 Thr tRNA
|

3403814 | 3403933 | - | 120 | 29140543 | t4651 | - | 5S ribosomal RNA |

3404034 | 3407039 | - | 3006 | 29140543 | t3307 | - | 23S ribosomal RNA |

3407225 | 3407300 | - | 76 | 29140543 | t3308 | - | 02 Ala tRNA
|

3407412 | 3407488 | - | 77 | 29140543 | t3309 | - | 14 Ile tRNA
|

3407559 | 3409092 | - | 1534 | 29140543 | t3310 | - | 16S ribosomal RNA |

3465290 | 3465366 | - | 77 | 29140543 | t3363 | - | 03 Pro tRNA
|

3465409 | 3465495 | - | 87 | 29140543 | t3364 | - | 15 Leu tRNA
|

3465516 | 3465591 | - | 76 | 29140543 | t3365 | - | 09 His tRNA
|

3465646 | 3465722 | - | 77 | 29140543 | t3366 | - | 11 Arg tRNA
|

3538178 | 3538253 | - | 76 | 29140543 | t3450 | - | 20 Trp tRNA
|

3538262 | 3538338 | - | 77 | 29140543 | t3451 | - | 06 Asp tRNA
|

3538391 | 3538510 | - | 120 | 29140543 | t4652 | - | 5S ribosomal RNA |

3538611 | 3541616 | - | 3006 | 29140543 | t3452 | - | 23S ribosomal RNA |

3541810 | 3541885 | - | 76 | 29140543 | t3453 | - | 04 Glu tRNA
|

3541972 | 3543505 | - | 1534 | 29140543 | t3454 | - | 16S ribosomal RNA |

3576381 | 3576456 | - | 76 | 29140543 | t3482 | - | 12 Thr tRNA
|

3576463 | 3576537 | - | 75 | 29140543 | t3483 | - | 01 Gly tRNA
|

3576654 | 3576738 | - | 85 | 29140543 | t3484 | - | 18 Tyr tRNA
|

3576747 | 3576822 | - | 76 | 29140543 | t3485 | - | 12 Thr tRNA
|

3580445 | 3580564 | - | 120 | 29140543 | t4653 | - | 5S ribosomal RNA |

3580665 | 3583671 | - | 3007 | 29140543 | t3490 | - | 23S ribosomal RNA |

3583854 | 3583929 | - | 76 | 29140543 | t3491 | - | 02 Ala tRNA
|

3584041 | 3584117 | - | 77 | 29140543 | t3492 | - | 14 Ile tRNA
|

3584188 | 3585721 | - | 1534 | 29140543 | t3493 | - | 16S ribosomal RNA |

3593822 | 3594004 | + | 183 | 29140543 | t4647 | - | OxyS RNA |

3721814 | 3721923 | - | 110 | 29140543 | t4648 | - | Spot 42 RNA |

3729439 | 3729558 | - | 120 | 29140543 | t4654 | - | 5S ribosomal RNA |

3729659 | 3732664 | - | 3006 | 29140543 | t3628 | - | 23S ribosomal RNA |

3732858 | 3732933 | - | 76 | 29140543 | t3629 | - | 04 Glu tRNA
|

3733020 | 3734553 | - | 1534 | 29140543 | t3630 | - | 16S ribosomal RNA |

3885953 | 3886043 | - | 91 | 29140543 | t3768 | - | Sec tRNA |

4007384 | 4007460 | + | 77 | 29140543 | t3880 | - | 03 Pro tRNA
|

4242149 | 4243682 | + | 1534 | 29140543 | t4106 | - | 16S ribosomal RNA |

4243769 | 4243844 | + | 76 | 29140543 | t4107 | - | 04 Glu tRNA
|

4244038 | 4247043 | + | 3006 | 29140543 | t4108 | - | 23S ribosomal RNA |

4247144 | 4247263 | + | 120 | 29140543 | t4655 | - | 5S ribosomal RNA |

4525975 | 4526050 | - | 76 | 29140543 | t4372 | - | 17 Phe tRNA
|

4555903 | 4555978 | + | 76 | 29140543 | t4404 | - | 01 Gly tRNA
|

4556135 | 4556210 | + | 76 | 29140543 | t4405 | - | 01 Gly tRNA
|

4666494 | 4666578 | + | 85 | 29140543 | t4517 | - | 15 Leu tRNA
|

4750118 | 4750204 | - | 87 | 29140543 | t4596 | - | 15 Leu tRNA
|

4750236 | 4750322 | - | 87 | 29140543 | t4597 | - | 15 Leu tRNA
|

4750350 | 4750436 | - | 87 | 29140543 | t4598 | - | 15 Leu tRNA
|