Материалы:NC 008529

LOCUS NC_008529 1856951 bp DNA circular BCT 31-OCT-2006 DEFINITION Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete genome. ACCESSION NC_008529 VERSION NC_008529.1 GI:116513228 KEYWORDS . SOURCE Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 ORGANISM Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae; Lactobacillus. REFERENCE 1 (bases 1 to 1856951) AUTHORS Makarova,K., Slesarev,A., Wolf,Y., Sorokin,A., Mirkin,B., Koonin,E., Pavolv,A., Pavlova,N., Karamychev,V., Polouchine,N., Shakhova,V., Grigoriev,I., Lou,Y., Rohksar,D., Lucas,S., Huang,K., Goldstein,D.M., Hawkins,T., Plengvidhya,V., Welker,D., Hughes,J., Goh,Y., Benson,A., Baldwin,K., Lee,J.-H., Diaz-Muniz,I., Dosti,B., Smeianov,V., Wechter,W., Barabote,R., Lorca,G., Altermann,E., Barrangou,R., Ganesan,B., Xie,Y., Rawsthorne,H., Tamir,D., Parker,C., Breidt,F., Broadbent,J., Hutkins,R., O'Sulllivan,D., Steele,J., Unlu,G., Saier,M., Klaenhammer,T., Richardson,P., Kozyavkin,S., Weimer,B. and Mills,D. TITLE Comparative genomics of the lactic acid bacteria JOURNAL Proc. Natl. Acad. Sci. U.S.A. 103 (42), 15611-15616 (2006) PUBMED 17030793 REFERENCE 2 (bases 1 to 1856951) AUTHORS . CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-OCT-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1856951) AUTHORS Lucas,S., Copeland,A., Detter,J.C., Glavina del Rio,T., Pitluck,S., Grigoriev,I., Rokhsar,D., Slesarev,A., Pavlov,A., Pavlova,N., Karamychev,V., Polouchine,N., Shakhova,V., Kozyavkin,S., Makarova,K., Koonin,E., Mills,D.A. and Richardson,P. CONSRTM US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc. TITLE Direct Submission JOURNAL Submitted (22-MAY-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000412. URL -- http://www.jgi.doe.gov JGI Project ID: 2662184 Source DNA and bacteria available from James L. Steele (jlsteele@facstaff.wisc.edu) Bacteria also available from ATCC: ATCC BAA-365 Contacts: James L. Steele (jlsteele@facstaff.wisc.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Annotation done by Kira Makarova and Eugene Koonin Finishing done by Fidelity Systems Inc. (Gaithersburg) URL -- http://www.fidelitysystems.com Project Information available at: http://genome.jgi-psf.org/mic_home.html The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

19366 | 19438 | + | 73 | 116513228 | LBUL_t0018 | - | 12 Thr tRNA
|

30062 | 30134 | + | 73 | 116513228 | LBUL_t0027 | - | 12 Thr tRNA
|

43705 | 45265 | + | 1561 | 116513228 | LBUL_r0045 | - | 16S ribosomal RNA |

45831 | 48390 | + | 2560 | 116513228 | LBUL_r0046 | - | 23S ribosomal RNA |

48463 | 48565 | + | 103 | 116513228 | LBUL_r0047 | - | 5S ribosomal RNA |

106604 | 106679 | - | 76 | 116513228 | LBUL_t0110 | - | 10 Lys tRNA
|

212648 | 212720 | + | 73 | 116513228 | LBUL_t0220 | - | 12 Thr tRNA
|

278998 | 279068 | - | 71 | 116513228 | LBUL_t0292 | - | 01 Gly tRNA
|

325067 | 325138 | + | 72 | 116513228 | LBUL_t0335 | - | 01 Gly tRNA
|

325143 | 325216 | + | 74 | 116513228 | LBUL_t0336 | - | 03 Pro tRNA
|

325325 | 325399 | + | 75 | 116513228 | LBUL_t0337 | - | 01 Gly tRNA
|

364493 | 364564 | + | 72 | 116513228 | LBUL_t0390 | - | 05 Gln tRNA
|

367478 | 367559 | + | 82 | 116513228 | LBUL_t0394 | - | 18 Tyr tRNA
|

367565 | 367636 | + | 72 | 116513228 | LBUL_t0395 | - | 05 Gln tRNA
|

382938 | 383026 | + | 89 | 116513228 | LBUL_t0410 | - | 15 Leu tRNA
|

455591 | 455665 | + | 75 | 116513228 | LBUL_t0485 | - | 11 Arg tRNA
|

533368 | 533442 | - | 75 | 116513228 | LBUL_t0565 | - | 11 Arg tRNA
|

575332 | 575693 | + | 362 | 116513228 | LBUL_s0619 | - | tmRNA |

584786 | 584858 | - | 73 | 116513228 | LBUL_t0627 | - | 05 Gln tRNA
|

584864 | 584935 | - | 72 | 116513228 | LBUL_t0628 | - | 04 Glu tRNA
|

683265 | 684825 | + | 1561 | 116513228 | LBUL_r0728 | - | 16S ribosomal RNA |

684938 | 685011 | + | 74 | 116513228 | LBUL_t0729 | - | 14 Ile tRNA
|

685081 | 685153 | + | 73 | 116513228 | LBUL_t0730 | - | 02 Ala tRNA
|

685631 | 688190 | + | 2560 | 116513228 | LBUL_r0731 | - | 23S ribosomal RNA |

688262 | 688364 | + | 103 | 116513228 | LBUL_r0732 | - | 5S ribosomal RNA |

745956 | 746044 | - | 89 | 116513228 | LBUL_t0791 | - | 08 Ser tRNA
|

787059 | 787142 | + | 84 | 116513228 | LBUL_t0830 | - | 15 Leu tRNA
|

792486 | 794046 | + | 1561 | 116513228 | LBUL_r0837 | - | 16S ribosomal RNA |

794158 | 794231 | + | 74 | 116513228 | LBUL_t0838 | - | 14 Ile tRNA
|

794301 | 794373 | + | 73 | 116513228 | LBUL_t0839 | - | 02 Ala tRNA
|

794850 | 797409 | + | 2560 | 116513228 | LBUL_r0840 | - | 23S ribosomal RNA |

797482 | 797584 | + | 103 | 116513228 | LBUL_r0841 | - | 5S ribosomal RNA |

800709 | 800781 | + | 73 | 116513228 | LBUL_t0844 | - | 07 Asn tRNA
|

800785 | 800858 | + | 74 | 116513228 | LBUL_t0845 | - | 03 Pro tRNA
|

800883 | 800954 | + | 72 | 116513228 | LBUL_t0846 | - | 01 Gly tRNA
|

800985 | 801058 | + | 74 | 116513228 | LBUL_t0847 | - | 11 Arg tRNA
|

801061 | 801133 | + | 73 | 116513228 | LBUL_t0848 | - | 13 Val tRNA
|

801137 | 801208 | + | 72 | 116513228 | LBUL_t0849 | - | 04 Glu tRNA
|

801251 | 801338 | + | 88 | 116513228 | LBUL_t0850 | - | 08 Ser tRNA
|

801348 | 801421 | + | 74 | 116513228 | LBUL_t0851 | - | 16 Met tRNA
|

801425 | 801498 | + | 74 | 116513228 | LBUL_t0852 | - | 06 Asp tRNA
|

801505 | 801577 | + | 73 | 116513228 | LBUL_t0853 | - | 17 Phe tRNA
|

801586 | 801667 | + | 82 | 116513228 | LBUL_t0854 | - | 18 Tyr tRNA
|

801672 | 801742 | + | 71 | 116513228 | LBUL_t0855 | - | 20 Trp tRNA
|

801756 | 801831 | + | 76 | 116513228 | LBUL_t0856 | - | 09 His tRNA
|

801858 | 801928 | + | 71 | 116513228 | LBUL_t0857 | - | 19 Cys tRNA
|

801957 | 802041 | + | 85 | 116513228 | LBUL_t0858 | - | 15 Leu tRNA
|

862758 | 863078 | + | 321 | 116513228 | LBUL_r0923 | - | RNA_RNaseP_classB |

1088689 | 1088760 | - | 72 | 116513228 | LBUL_t1182 | - | 05 Gln tRNA
|

1265958 | 1266031 | - | 74 | 116513228 | LBUL_t1349 | - | 11 Arg tRNA
|

1354121 | 1354204 | + | 84 | 116513228 | LBUL_t1445 | - | 15 Leu tRNA
|

1369469 | 1369541 | - | 73 | 116513228 | LBUL_t1456 | - | 13 Val tRNA
|

1369545 | 1369616 | - | 72 | 116513228 | LBUL_t1457 | - | 04 Glu tRNA
|

1369755 | 1369828 | - | 74 | 116513228 | LBUL_t1458 | - | 16 Met tRNA
|

1369835 | 1369925 | - | 91 | 116513228 | LBUL_t1459 | - | 08 Ser tRNA
|

1369934 | 1370006 | - | 73 | 116513228 | LBUL_t1460 | - | 07 Asn tRNA
|

1370026 | 1370128 | - | 103 | 116513228 | LBUL_r1461 | - | 5S ribosomal RNA |

1370201 | 1372761 | - | 2561 | 116513228 | LBUL_r1462 | - | 23S ribosomal RNA |

1373238 | 1373310 | - | 73 | 116513228 | LBUL_t1463 | - | 02 Ala tRNA
|

1373380 | 1373453 | - | 74 | 116513228 | LBUL_t1464 | - | 14 Ile tRNA
|

1373565 | 1375125 | - | 1561 | 116513228 | LBUL_r1465 | - | 16S ribosomal RNA |

1480025 | 1480101 | - | 77 | 116513228 | LBUL_t1590 | - | 06 Asp tRNA
|

1480128 | 1480199 | - | 72 | 116513228 | LBUL_t1591 | - | 04 Glu tRNA
|

1480203 | 1480275 | - | 73 | 116513228 | LBUL_t1592 | - | 13 Val tRNA
|

1480278 | 1480351 | - | 74 | 116513228 | LBUL_t1593 | - | 11 Arg tRNA
|

1480387 | 1480458 | - | 72 | 116513228 | LBUL_t1594 | - | 01 Gly tRNA
|

1480507 | 1480609 | - | 103 | 116513228 | LBUL_r1595 | - | 5S ribosomal RNA |

1480681 | 1483240 | - | 2560 | 116513228 | LBUL_r1596 | - | 23S ribosomal RNA |

1483805 | 1485365 | - | 1561 | 116513228 | LBUL_r1597 | - | 16S ribosomal RNA |

1507735 | 1507807 | - | 73 | 116513228 | LBUL_t1625 | - | 10 Lys tRNA
|

1507842 | 1507914 | - | 73 | 116513228 | LBUL_t1626 | - | 10 Lys tRNA
|

1507948 | 1508020 | - | 73 | 116513228 | LBUL_t1627 | - | 10 Lys tRNA
|

1508054 | 1508126 | - | 73 | 116513228 | LBUL_t1628 | - | 10 Lys tRNA
|

1508160 | 1508232 | - | 73 | 116513228 | LBUL_t1629 | - | 10 Lys tRNA
|

1510979 | 1511051 | - | 73 | 116513228 | LBUL_t1632 | - | 13 Val tRNA
|

1511055 | 1511126 | - | 72 | 116513228 | LBUL_t1633 | - | 04 Glu tRNA
|

1511278 | 1511366 | + | 89 | 116513228 | LBUL_t1634 | - | 15 Leu tRNA
|

1534485 | 1534557 | - | 73 | 116513228 | LBUL_t1656 | - | 12 Thr tRNA
|

1554942 | 1555029 | - | 88 | 116513228 | LBUL_t1678 | - | 08 Ser tRNA
|

1558468 | 1558570 | - | 103 | 116513228 | LBUL_r1681 | - | 5S ribosomal RNA |

1558642 | 1561201 | - | 2560 | 116513228 | LBUL_r1682 | - | 23S ribosomal RNA |

1561678 | 1561750 | - | 73 | 116513228 | LBUL_t1683 | - | 02 Ala tRNA
|

1561820 | 1561893 | - | 74 | 116513228 | LBUL_t1684 | - | 14 Ile tRNA
|

1562005 | 1563565 | - | 1561 | 116513228 | LBUL_r1685 | - | 16S ribosomal RNA |

1584544 | 1584628 | - | 85 | 116513228 | LBUL_t1711 | - | 15 Leu tRNA
|

1584646 | 1584730 | - | 85 | 116513228 | LBUL_t1712 | - | 15 Leu tRNA
|

1584759 | 1584829 | - | 71 | 116513228 | LBUL_t1713 | - | 19 Cys tRNA
|

1584856 | 1584931 | - | 76 | 116513228 | LBUL_t1714 | - | 09 His tRNA
|

1584945 | 1585015 | - | 71 | 116513228 | LBUL_t1715 | - | 20 Trp tRNA
|

1585020 | 1585101 | - | 82 | 116513228 | LBUL_t1716 | - | 18 Tyr tRNA
|

1585110 | 1585182 | - | 73 | 116513228 | LBUL_t1717 | - | 17 Phe tRNA
|

1585189 | 1585262 | - | 74 | 116513228 | LBUL_t1718 | - | 06 Asp tRNA
|

1585266 | 1585339 | - | 74 | 116513228 | LBUL_t1719 | - | 16 Met tRNA
|

1585349 | 1585436 | - | 88 | 116513228 | LBUL_t1720 | - | 08 Ser tRNA
|

1585479 | 1585550 | - | 72 | 116513228 | LBUL_t1721 | - | 04 Glu tRNA
|

1585809 | 1585899 | - | 91 | 116513228 | LBUL_t1722 | - | 08 Ser tRNA
|

1585902 | 1585975 | - | 74 | 116513228 | LBUL_t1723 | - | 14 Ile tRNA
|

1585979 | 1586049 | - | 71 | 116513228 | LBUL_t1724 | - | 01 Gly tRNA
|

1586064 | 1586136 | - | 73 | 116513228 | LBUL_t1725 | - | 17 Phe tRNA
|

1586154 | 1586227 | - | 74 | 116513228 | LBUL_t1726 | - | 16 Met tRNA
|

1586239 | 1586312 | - | 74 | 116513228 | LBUL_t1727 | - | 16 Met tRNA
|

1586325 | 1586398 | - | 74 | 116513228 | LBUL_t1728 | - | 16 Met tRNA
|

1586435 | 1586508 | - | 74 | 116513228 | LBUL_t1729 | - | 03 Pro tRNA
|

1586515 | 1586588 | - | 74 | 116513228 | LBUL_t1730 | - | 11 Arg tRNA
|

1586594 | 1586679 | - | 86 | 116513228 | LBUL_t1731 | - | 15 Leu tRNA
|

1586695 | 1586766 | - | 72 | 116513228 | LBUL_t1732 | - | 01 Gly tRNA
|

1586771 | 1586843 | - | 73 | 116513228 | LBUL_t1733 | - | 12 Thr tRNA
|

1586855 | 1586936 | - | 82 | 116513228 | LBUL_t1734 | - | 15 Leu tRNA
|

1586949 | 1587021 | - | 73 | 116513228 | LBUL_t1735 | - | 10 Lys tRNA
|

1587024 | 1587096 | - | 73 | 116513228 | LBUL_t1736 | - | 13 Val tRNA
|

1590726 | 1590828 | - | 103 | 116513228 | LBUL_r1741 | - | 5S ribosomal RNA |

1590900 | 1593459 | - | 2560 | 116513228 | LBUL_r1742 | - | 23S ribosomal RNA |

1593936 | 1594008 | - | 73 | 116513228 | LBUL_t1743 | - | 02 Ala tRNA
|

1594078 | 1594151 | - | 74 | 116513228 | LBUL_t1744 | - | 14 Ile tRNA
|

1594263 | 1595823 | - | 1561 | 116513228 | LBUL_r1745 | - | 16S ribosomal RNA |

1788751 | 1788853 | - | 103 | 116513228 | LBUL_r1964 | - | 5S ribosomal RNA |

1788925 | 1791484 | - | 2560 | 116513228 | LBUL_r1965 | - | 23S ribosomal RNA |

1792049 | 1793609 | - | 1561 | 116513228 | LBUL_r1966 | - | 16S ribosomal RNA |

1795575 | 1795648 | - | 74 | 116513228 | LBUL_t1969 | - | 06 Asp tRNA
|

1795652 | 1795724 | - | 73 | 116513228 | LBUL_t1970 | - | 13 Val tRNA
|

1795727 | 1795800 | - | 74 | 116513228 | LBUL_t1971 | - | 11 Arg tRNA
|

1795836 | 1795907 | - | 72 | 116513228 | LBUL_t1972 | - | 01 Gly tRNA
|

1795927 | 1796000 | - | 74 | 116513228 | LBUL_t1973 | - | 03 Pro tRNA
|

1796004 | 1796076 | - | 73 | 116513228 | LBUL_t1974 | - | 07 Asn tRNA
|

1796096 | 1796198 | - | 103 | 116513228 | LBUL_r1975 | - | 5S ribosomal RNA |

1796270 | 1798829 | - | 2560 | 116513228 | LBUL_r1976 | - | 23S ribosomal RNA |

1799394 | 1800954 | - | 1561 | 116513228 | LBUL_r1977 | - | 16S ribosomal RNA |