Материалы:NC 006370

```
LOCUS NC_006370 4085304 bp DNA circular BCT 16-AUG-2007
DEFINITION Photobacterium profundum SS9 chromosome 1, complete sequence.
ACCESSION NC_006370
VERSION NC_006370.1 GI:54307237
KEYWORDS complete genome.
SOURCE Photobacterium profundum SS9
ORGANISM Photobacterium profundum SS9
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
Vibrionaceae; Photobacterium.
REFERENCE 1 (bases 1 to 4085304)
AUTHORS Vezzi,A., Campanaro,S., D'Angelo,M., Simonato,F., Vitulo,N.,
Lauro,F.M., Cestaro,A., Malacrida,G., Simionati,B., Cannata,N.,
Romualdi,C., Bartlett,D.H. and Valle,G.
TITLE Life at depth: Photobacterium profundum genome sequence and
expression analysis
JOURNAL Science 307 (5714), 1459-1461 (2005)
PUBMED 15746425
REFERENCE 2 (bases 1 to 4085304)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (20-OCT-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3
AUTHORS Cestaro,A.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2004) Cestaro A., CRIBI, Biotechnology Centre,
University of Padova via U. Bassi 58/B, 35131 Padova, Italy
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CR354531.
coding regions predicted by orpheus and glimmer; tRNA features
predicted by tRNAscan SE program.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

69574 | 71120 | + | 1547 | 54307237 | PBPRA0068 | - | 16S ribosomal RNA |

71493 | 74418 | + | 2926 | 54307237 | PBPRA0069 | - | 23S ribosomal RNA |

74716 | 74833 | + | 118 | 54307237 | PBPRA0070 | - | 5S ribosomal RNA |

75252 | 76814 | + | 1563 | 54307237 | PBPRA0071 | - | 16S ribosomal RNA |

76907 | 76982 | + | 76 | 54307237 | PBPRA0072 | - | 04 Glu tRNA
|

77016 | 77091 | + | 76 | 54307237 | PBPRA0073 | - | 10 Lys tRNA
|

77159 | 77234 | + | 76 | 54307237 | PBPRA0074 | - | 13 Val tRNA
|

77601 | 80495 | + | 2895 | 54307237 | PBPRA0075 | - | 23S ribosomal RNA |

80793 | 80910 | + | 118 | 54307237 | PBPRA0076 | - | 5S ribosomal RNA |

81008 | 81084 | + | 77 | 54307237 | PBPRA0077 | - | 06 Asp tRNA
|

96967 | 97043 | + | 77 | 54307237 | PBPRA0093 | - | 11 Arg tRNA
|

97078 | 97153 | + | 76 | 54307237 | PBPRA0094 | - | 09 His tRNA
|

97220 | 97296 | + | 77 | 54307237 | PBPRA0095 | - | 03 Pro tRNA
|

97306 | 97381 | + | 76 | 54307237 | PBPRA0096 | - | 09 His tRNA
|

97433 | 97509 | + | 77 | 54307237 | PBPRA0097 | - | 03 Pro tRNA
|

103843 | 103919 | + | 77 | 54307237 | PBPRA0102 | - | 20 Trp tRNA
|

361216 | 362748 | + | 1533 | 54307237 | PBPRA0359 | - | 16S ribosomal RNA |

362841 | 362916 | + | 76 | 54307237 | PBPRA0360 | - | 04 Glu tRNA
|

362950 | 363025 | + | 76 | 54307237 | PBPRA0361 | - | 10 Lys tRNA
|

363092 | 363167 | + | 76 | 54307237 | PBPRA0362 | - | 13 Val tRNA
|

363497 | 366391 | + | 2895 | 54307237 | PBPRA0363 | - | 23S ribosomal RNA |

366542 | 366659 | + | 118 | 54307237 | PBPRA0364 | - | 5S ribosomal RNA |

366702 | 366777 | + | 76 | 54307237 | PBPRA0365 | - | 12 Thr tRNA
|

366782 | 366902 | + | 121 | 54307237 | PBPR_Ar01 | - | 5S ribosomal RNA |

443616 | 443691 | - | 76 | 54307237 | PBPRA0429 | - | 16 Met tRNA
|

520018 | 520102 | + | 85 | 54307237 | PBPRA0491 | - | 15 Leu tRNA
|

529482 | 531044 | + | 1563 | 54307237 | PBPRA0502 | - | 16S ribosomal RNA |

531137 | 531212 | + | 76 | 54307237 | PBPRA0503 | - | 04 Glu tRNA
|

531246 | 531321 | + | 76 | 54307237 | PBPRA0504 | - | 10 Lys tRNA
|

531388 | 531463 | + | 76 | 54307237 | PBPRA0505 | - | 13 Val tRNA
|

531807 | 534700 | + | 2894 | 54307237 | PBPRA0506 | - | 23S ribosomal RNA |

534902 | 535019 | + | 118 | 54307237 | PBPRA0507 | - | 5S ribosomal RNA |

535051 | 535127 | + | 77 | 54307237 | PBPRA0508 | - | 06 Asp tRNA
|

665339 | 665423 | + | 85 | 54307237 | PBPRA0608 | - | 15 Leu tRNA
|

665482 | 665558 | + | 77 | 54307237 | PBPRA0609 | - | 16 Met tRNA
|

779541 | 781117 | + | 1577 | 54307237 | PBPRA0704 | - | 16S ribosomal RNA |

781215 | 781290 | + | 76 | 54307237 | PBPRA0705 | - | 04 Glu tRNA
|

781319 | 781394 | + | 76 | 54307237 | PBPRA0706 | - | 10 Lys tRNA
|

781461 | 781536 | + | 76 | 54307237 | PBPRA0707 | - | 13 Val tRNA
|

781628 | 781703 | + | 76 | 54307237 | PBPRA0708 | - | 02 Ala tRNA
|

782045 | 784970 | + | 2926 | 54307237 | PBPRA0709 | - | 23S ribosomal RNA |

785220 | 785337 | + | 118 | 54307237 | PBPRA0710 | - | 5S ribosomal RNA |

785386 | 785505 | + | 120 | 54307237 | PBPR_Ar02 | - | 5S ribosomal RNA |

785537 | 785613 | + | 77 | 54307237 | PBPRA0711 | - | 06 Asp tRNA
|

966735 | 966810 | + | 76 | 54307237 | PBPRA0875 | - | 02 Ala tRNA
|

991092 | 991168 | - | 77 | 54307237 | PBPRA0892 | - | 11 Arg tRNA
|

1922427 | 1922502 | - | 76 | 54307237 | PBPRA1673 | - | 07 Asn tRNA
|

1922509 | 1922583 | - | 75 | 54307237 | PBPRA1674 | - | 01 Gly tRNA
|

1922592 | 1922667 | - | 76 | 54307237 | PBPRA1675 | - | 12 Thr tRNA
|

1922713 | 1922803 | - | 91 | 54307237 | PBPRA1676 | - | 08 Ser tRNA
|

2064941 | 2065020 | + | 80 | 54307237 | PBPRA1795 | - | 10 Lys tRNA
|

2413898 | 2413974 | + | 77 | 54307237 | PBPRA2092 | - | 13 Val tRNA
|

2414020 | 2414096 | + | 77 | 54307237 | PBPRA2093 | - | 13 Val tRNA
|

2414142 | 2414218 | + | 77 | 54307237 | PBPRA2094 | - | 13 Val tRNA
|

2414263 | 2414339 | + | 77 | 54307237 | PBPRA2095 | - | 13 Val tRNA
|

2513558 | 2513648 | - | 91 | 54307237 | PBPRA2183 | - | 08 Ser tRNA
|

2555097 | 2555170 | - | 74 | 54307237 | PBPRA2218 | - | 19 Cys tRNA
|

2555229 | 2555315 | - | 87 | 54307237 | PBPRA2219 | - | 15 Leu tRNA
|

2557486 | 2557573 | - | 88 | 54307237 | PBPRA2221 | - | 15 Leu tRNA
|

2563807 | 2563882 | - | 76 | 54307237 | PBPRA2225 | - | 01 Gly tRNA
|

2563926 | 2564012 | - | 87 | 54307237 | PBPRA2226 | - | 15 Leu tRNA
|

2564120 | 2564193 | - | 74 | 54307237 | PBPRA2227 | - | 19 Cys tRNA
|

2572575 | 2572650 | - | 76 | 54307237 | PBPRA2232 | - | 01 Gly tRNA
|

2572683 | 2572769 | - | 87 | 54307237 | PBPRA2233 | - | 15 Leu tRNA
|

2572877 | 2572952 | - | 76 | 54307237 | PBPRA2234 | - | 01 Gly tRNA
|

2572974 | 2573047 | - | 74 | 54307237 | PBPRA2235 | - | 19 Cys tRNA
|

2654740 | 2654830 | - | 91 | 54307237 | PBPRA2305 | - | 08 Ser tRNA
|

2931838 | 2931928 | - | 91 | 54307237 | PBPRA2529 | - | 08 Ser tRNA
|

2931953 | 2932040 | - | 88 | 54307237 | PBPRA2530 | - | 08 Ser tRNA
|

2953105 | 2953192 | - | 88 | 54307237 | PBPRA2544 | - | 08 Ser tRNA
|

3057691 | 3057767 | - | 77 | 54307237 | PBPRA2640 | - | 11 Arg tRNA
|

3161180 | 3161264 | + | 85 | 54307237 | PBPRA2723 | - | 18 Tyr tRNA
|

3161363 | 3161447 | + | 85 | 54307237 | PBPRA2724 | - | 18 Tyr tRNA
|

3161548 | 3161633 | + | 86 | 54307237 | PBPRA2725 | - | 18 Tyr tRNA
|

3161734 | 3161818 | + | 85 | 54307237 | PBPRA2726 | - | 18 Tyr tRNA
|

3161948 | 3162032 | + | 85 | 54307237 | PBPRA2727 | - | 18 Tyr tRNA
|

3162133 | 3162217 | + | 85 | 54307237 | PBPRA2728 | - | 18 Tyr tRNA
|

3276351 | 3276427 | - | 77 | 54307237 | PBPRA2826 | - | 03 Pro tRNA
|

3277141 | 3277217 | - | 77 | 54307237 | PBPRA2827 | - | 03 Pro tRNA
|

3277606 | 3277682 | - | 77 | 54307237 | PBPRA2828 | - | 03 Pro tRNA
|

3278062 | 3278138 | - | 77 | 54307237 | PBPRA2829 | - | 03 Pro tRNA
|

3278363 | 3278449 | - | 87 | 54307237 | PBPRA2830 | - | Xaa tRNA |

3302046 | 3302122 | + | 77 | 54307237 | PBPRA2852 | - | 16 Met tRNA
|

3302171 | 3302255 | + | 85 | 54307237 | PBPRA2853 | - | 15 Leu tRNA
|

3302308 | 3302382 | + | 75 | 54307237 | PBPRA2854 | - | 05 Gln tRNA
|

3302449 | 3302525 | + | 77 | 54307237 | PBPRA2855 | - | 16 Met tRNA
|

3302574 | 3302658 | + | 85 | 54307237 | PBPRA2856 | - | 15 Leu tRNA
|

3302688 | 3302762 | + | 75 | 54307237 | PBPRA2857 | - | 05 Gln tRNA
|

3302829 | 3302905 | + | 77 | 54307237 | PBPRA2858 | - | 16 Met tRNA
|

3302954 | 3303038 | + | 85 | 54307237 | PBPRA2859 | - | 15 Leu tRNA
|

3303068 | 3303142 | + | 75 | 54307237 | PBPRA2860 | - | 05 Gln tRNA
|

3303207 | 3303283 | + | 77 | 54307237 | PBPRA2861 | - | 16 Met tRNA
|

3303329 | 3303413 | + | 85 | 54307237 | PBPRA2862 | - | 15 Leu tRNA
|

3303531 | 3303615 | + | 85 | 54307237 | PBPRA2863 | - | 15 Leu tRNA
|

3303674 | 3303748 | + | 75 | 54307237 | PBPRA2864 | - | 05 Gln tRNA
|

3303832 | 3303916 | + | 85 | 54307237 | PBPRA2865 | - | 15 Leu tRNA
|

3304046 | 3304130 | + | 85 | 54307237 | PBPRA2866 | - | 15 Leu tRNA
|

3304189 | 3304263 | + | 75 | 54307237 | PBPRA2867 | - | 05 Gln tRNA
|

3304347 | 3304431 | + | 85 | 54307237 | PBPRA2868 | - | 15 Leu tRNA
|

3304562 | 3304646 | + | 85 | 54307237 | PBPRA2869 | - | 15 Leu tRNA
|

3304705 | 3304779 | + | 75 | 54307237 | PBPRA2870 | - | 05 Gln tRNA
|

3304844 | 3304920 | + | 77 | 54307237 | PBPRA2871 | - | 16 Met tRNA
|

3304966 | 3305050 | + | 85 | 54307237 | PBPRA2872 | - | 15 Leu tRNA
|

3305168 | 3305252 | + | 85 | 54307237 | PBPRA2873 | - | 15 Leu tRNA
|

3305311 | 3305385 | + | 75 | 54307237 | PBPRA2874 | - | 05 Gln tRNA
|

3305469 | 3305553 | + | 85 | 54307237 | PBPRA2875 | - | 15 Leu tRNA
|

3356938 | 3357014 | - | 77 | 54307237 | PBPRA2925 | - | 20 Trp tRNA
|

3357051 | 3357127 | - | 77 | 54307237 | PBPRA2926 | - | 06 Asp tRNA
|

3357225 | 3357342 | - | 118 | 54307237 | PBPRA2927 | - | 5S ribosomal RNA |

3357537 | 3360445 | - | 2909 | 54307237 | PBPRA2928 | - | 23S ribosomal RNA |

3360757 | 3360832 | - | 76 | 54307237 | PBPRA2929 | - | 02 Ala tRNA
|

3360882 | 3360957 | - | 76 | 54307237 | PBPRA2930 | - | 13 Val tRNA
|

3361024 | 3361099 | - | 76 | 54307237 | PBPRA2931 | - | 10 Lys tRNA
|

3361132 | 3361207 | - | 76 | 54307237 | PBPRA2932 | - | 04 Glu tRNA
|

3361302 | 3362848 | - | 1547 | 54307237 | PBPRA2933 | - | 16S ribosomal RNA |

3453084 | 3453160 | - | 77 | 54307237 | PBPRA3012 | - | 06 Asp tRNA
|

3453193 | 3453313 | - | 121 | 54307237 | PBPR_Ar03 | - | 5S ribosomal RNA |

3453362 | 3453479 | - | 118 | 54307237 | PBPRA3013 | - | 5S ribosomal RNA |

3453780 | 3456673 | - | 2894 | 54307237 | PBPRA3014 | - | 23S ribosomal RNA |

3457017 | 3457092 | - | 76 | 54307237 | PBPRA3015 | - | 02 Ala tRNA
|

3457137 | 3457213 | - | 77 | 54307237 | PBPRA3016 | - | 14 Ile tRNA
|

3457370 | 3458934 | - | 1565 | 54307237 | PBPRA3017 | - | 16S ribosomal RNA |

3498958 | 3499034 | - | 77 | 54307237 | PBPRA3053 | - | 11 Arg tRNA
|

3499092 | 3499168 | - | 77 | 54307237 | PBPRA3054 | - | 11 Arg tRNA
|

3499226 | 3499302 | - | 77 | 54307237 | PBPRA3055 | - | 11 Arg tRNA
|

3499360 | 3499436 | - | 77 | 54307237 | PBPRA3056 | - | 11 Arg tRNA
|

3499494 | 3499570 | - | 77 | 54307237 | PBPRA3057 | - | 11 Arg tRNA
|

3499628 | 3499704 | - | 77 | 54307237 | PBPRA3058 | - | 11 Arg tRNA
|

3499762 | 3499838 | - | 77 | 54307237 | PBPRA3059 | - | 11 Arg tRNA
|

3500033 | 3500109 | - | 77 | 54307237 | PBPRA3060 | - | 11 Arg tRNA
|

3500200 | 3500291 | - | 92 | 54307237 | PBPRA3061 | - | 08 Ser tRNA
|

3500304 | 3500380 | - | 77 | 54307237 | PBPRA3062 | - | 11 Arg tRNA
|

3500438 | 3500514 | - | 77 | 54307237 | PBPRA3063 | - | 11 Arg tRNA
|

3500553 | 3500644 | - | 92 | 54307237 | PBPRA3064 | - | 08 Ser tRNA
|

3590422 | 3590497 | + | 76 | 54307237 | PBPRA3157 | - | 17 Phe tRNA
|

3590557 | 3590632 | + | 76 | 54307237 | PBPRA3158 | - | 07 Asn tRNA
|

3590714 | 3590789 | + | 76 | 54307237 | PBPRA3159 | - | 12 Thr tRNA
|

3590874 | 3590949 | + | 76 | 54307237 | PBPRA3160 | - | 17 Phe tRNA
|

3590957 | 3591032 | + | 76 | 54307237 | PBPRA3161 | - | 07 Asn tRNA
|

3591113 | 3591188 | + | 76 | 54307237 | PBPRA3162 | - | 12 Thr tRNA
|

3591273 | 3591348 | + | 76 | 54307237 | PBPRA3163 | - | 17 Phe tRNA
|

3591356 | 3591431 | + | 76 | 54307237 | PBPRA3164 | - | 07 Asn tRNA
|

3591478 | 3591553 | + | 76 | 54307237 | PBPRA3165 | - | 12 Thr tRNA
|

3743227 | 3743303 | - | 77 | 54307237 | PBPRA3300 | - | 06 Asp tRNA
|

3743337 | 3743454 | - | 118 | 54307237 | PBPRA3301 | - | 5S ribosomal RNA |

3743656 | 3746563 | - | 2908 | 54307237 | PBPRA3302 | - | 23S ribosomal RNA |

3746936 | 3748468 | - | 1533 | 54307237 | PBPRA3303 | - | 16S ribosomal RNA |

3748887 | 3749004 | - | 118 | 54307237 | PBPRA3304 | - | 5S ribosomal RNA |

3749206 | 3752100 | - | 2895 | 54307237 | PBPRA3305 | - | 23S ribosomal RNA |

3752473 | 3754005 | - | 1533 | 54307237 | PBPRA3306 | - | 16S ribosomal RNA |

3808584 | 3808660 | - | 77 | 54307237 | PBPRA3357 | - | 16 Met tRNA
|

3808733 | 3808822 | - | 90 | 54307237 | PBPRA3358 | - | 01 Gly tRNA
|

3808854 | 3808930 | - | 77 | 54307237 | PBPRA3359 | - | 16 Met tRNA
|

3809002 | 3809077 | - | 76 | 54307237 | PBPRA3360 | - | 01 Gly tRNA
|

3809109 | 3809185 | - | 77 | 54307237 | PBPRA3361 | - | 16 Met tRNA
|

3809257 | 3809332 | - | 76 | 54307237 | PBPRA3362 | - | 01 Gly tRNA
|

3809364 | 3809440 | - | 77 | 54307237 | PBPRA3363 | - | 16 Met tRNA
|

3809512 | 3809587 | - | 76 | 54307237 | PBPRA3364 | - | 01 Gly tRNA
|

3809619 | 3809695 | - | 77 | 54307237 | PBPRA3365 | - | 16 Met tRNA
|

3809766 | 3809841 | - | 76 | 54307237 | PBPRA3366 | - | 01 Gly tRNA
|

3809873 | 3809949 | - | 77 | 54307237 | PBPRA3367 | - | 16 Met tRNA
|

3810020 | 3810095 | - | 76 | 54307237 | PBPRA3368 | - | 01 Gly tRNA
|

3810127 | 3810203 | - | 77 | 54307237 | PBPRA3369 | - | 16 Met tRNA
|

3893932 | 3894008 | - | 77 | 54307237 | PBPRA3440 | - | 12 Thr tRNA
|

3894021 | 3894095 | - | 75 | 54307237 | PBPRA3441 | - | 01 Gly tRNA
|

3894135 | 3894219 | - | 85 | 54307237 | PBPRA3442 | - | 18 Tyr tRNA
|

3894239 | 3894303 | - | 65 | 54307237 | PBPRA3443 | - | 12 Thr tRNA
|

3903560 | 3903636 | - | 77 | 54307237 | PBPRA3452 | - | 06 Asp tRNA
|

3903739 | 3903856 | - | 118 | 54307237 | PBPRA3453 | - | 5S ribosomal RNA |

3904154 | 3907048 | - | 2895 | 54307237 | PBPRA3454 | - | 23S ribosomal RNA |

3907355 | 3907430 | - | 76 | 54307237 | PBPRA3455 | - | 02 Ala tRNA
|

3907475 | 3907551 | - | 77 | 54307237 | PBPRA3456 | - | 14 Ile tRNA
|

3907627 | 3909173 | - | 1547 | 54307237 | PBPRA3457 | - | 16S ribosomal RNA |

3909582 | 3909699 | - | 118 | 54307237 | PBPRA3458 | - | 5S ribosomal RNA |

3909999 | 3912891 | - | 2893 | 54307237 | PBPRA3459 | - | 23S ribosomal RNA |

3913263 | 3914810 | - | 1548 | 54307237 | PBPRA3460 | - | 16S ribosomal RNA |

4020697 | 4020814 | - | 118 | 54307237 | PBPRA3555 | - | 5S ribosomal RNA |

4020997 | 4023908 | - | 2912 | 54307237 | PBPRA3556 | - | 23S ribosomal RNA |

4024247 | 4025793 | - | 1547 | 54307237 | PBPRA3557 | - | 16S ribosomal RNA |

4026211 | 4026328 | - | 118 | 54307237 | PBPRA3558 | - | 5S ribosomal RNA |

4026628 | 4029539 | - | 2912 | 54307237 | PBPRA3559 | - | 23S ribosomal RNA |

4029867 | 4029942 | - | 76 | 54307237 | PBPRA3560 | - | 13 Val tRNA
|

4030009 | 4030084 | - | 76 | 54307237 | PBPRA3561 | - | 10 Lys tRNA
|

4030118 | 4030193 | - | 76 | 54307237 | PBPRA3562 | - | 04 Glu tRNA
|

4030288 | 4031836 | - | 1549 | 54307237 | PBPRA3563 | - | 16S ribosomal RNA |

4032255 | 4032372 | - | 118 | 54307237 | PBPRA3564 | - | 5S ribosomal RNA |

4032553 | 4035464 | - | 2912 | 54307237 | PBPRA3565 | - | 23S ribosomal RNA |

4035769 | 4035844 | - | 76 | 54307237 | PBPRA3566 | - | 02 Ala tRNA
|

4035889 | 4035965 | - | 77 | 54307237 | PBPRA3567 | - | 14 Ile tRNA
|

4036041 | 4037588 | - | 1548 | 54307237 | PBPRA3568 | - | 16S ribosomal RNA |