Материалы:NC 004556

```
LOCUS NC_004556 2519802 bp DNA circular BCT 03-APR-2006
DEFINITION Xylella fastidiosa Temecula1, complete genome.
ACCESSION NC_004556
VERSION NC_004556.1 GI:28197945
KEYWORDS .
SOURCE Xylella fastidiosa Temecula1
ORGANISM Xylella fastidiosa Temecula1
Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
Xanthomonadaceae; Xylella.
REFERENCE 1 (bases 1 to 2519802)
AUTHORS Van Sluys,M.A., de Oliveira,M.C., Monteiro-Vitorello,C.B.,
Miyaki,C.Y., Furlan,L.R., Camargo,L.E.A., da Silva,A.C.R.,
Moon,D.H., Takita,M.A., Lemos,E.G.M., Machado,M.A., Ferro,M.I.T.,
da Silva,F.R., Goldman,M.H.S., Goldman,G.H., Lemos,M.V.F.,
El-Dorry,H., Tsai,S.M., Carrer,H., Carraro,D.M., de Oliveira,R.C.,
Nunes,L.R., Siqueira,W.J., Coutinho,L.L., Kimura,E.T., Ferro,E.S.,
Harakava,R., Kuramae,E.E., Marino,C.L., Giglioti,E., Abreu,I.L.,
Alves,L.M.C., do Amaral,A.M., Baia,G.S., Blanco,S.R., Brito,M.S.,
Cannavan,F.S., Celestino,A.V., da Cunha,A.F., Fenille,R.C.,
Ferro,J.A., Formighieri,E.F., Kishi,L.T., Leoni,S.G.,
Oliveira,A.R., Rosa,V.E. Jr., Sassaki,F.T., Sena,J.A.D., de
Souza,A.A., Truffi,D., Tsukumo,F., Yanai,G.M., Zaros,L.G.,
Civerolo,E.L., Simpson,A.J.G., Almeida,N.F. Jr., Setubal,J.C. and
Kitajima,J.P.
TITLE Comparative Analyses of the Complete Genome Sequences of Pierce's
Disease and Citrus Variegated Chlorosis Strains of Xylella
fastidiosa
JOURNAL J. Bacteriol. 185 (3), 1018-1026 (2003)
PUBMED 12533478
REFERENCE 2 (bases 1 to 2519802)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2519802)
AUTHORS Van Sluys,M.A., de Oliveira,M.C., Monteiro-Vitorello,C.B.,
Miyaki,C.Y., Furlan,L.R., Camargo,L.E.A., da Silva,A.C.R.,
Moon,D.H., Takita,M.A., Lemos,E.G.M., Machado,M.A., Ferro,M.I.T.,
da Silva,F.R., Goldman,M.H.S., Goldman,G.H., Lemos,M.V.F.,
El-Dorry,H., Tsai,S.M., Carrer,H., Carraro,D.M., de Oliveira,R.C.,
Nunes,L.R., Siqueira,W.J., Coutinho,L.L., Kimura,E.T., Ferro,E.S.,
Harakava,R., Kuramae,E.E., Marino,C.L., Giglioti,E., Abreu,I.L.,
Alves,L.M.C., do Amaral,A.M., Baia,G.S., Blanco,S.R., Brito,M.S.,
Cannavan,F.S., Celestino,A.V., da Cunha,A.F., Fenille,R.C.,
Ferro,J.A., Formighieri,E.F., Kishi,L.T., Leoni,S.G.,
Oliveira,A.R., Rosa,V.E. Jr., Sassaki,F.T., Sena,J.A.D., de
Souza,A.A., Truffi,D., Tsukumo,F., Yanai,G.M., Zaros,L.G.,
Civerolo,E.L., Simpson,A.J.G., Almeida,N.F. Jr., Setubal,J.C. and
Kitajima,J.P.
TITLE Direct Submission
JOURNAL Submitted (17-DEC-2001) Instituto de Biociencias, Universidade de
Sao Paulo, Rua do Matao, 277, Sao Paulo, SP 05508-900, Brazil
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE009442.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

20728 | 20804 | - | 77 | 28197945 | PD0016 | - | 16 Met tRNA
|

61898 | 61974 | + | 77 | 28197945 | PD0047 | - | 11 Arg tRNA
|

66041 | 67585 | + | 1545 | 28197945 | PD0048 | - | 16S ribosomal RNA |

67692 | 67767 | + | 76 | 28197945 | PD0049 | - | 02 Ala tRNA
|

67781 | 67857 | + | 77 | 28197945 | PD0050 | - | 14 Ile tRNA
|

68050 | 70932 | + | 2883 | 28197945 | PD0051 | - | 23S ribosomal RNA |

71060 | 71177 | + | 118 | 28197945 | PD0052 | - | 5S ribosomal RNA |

122451 | 122543 | + | 93 | 28197945 | PD0096 | - | 08 Ser tRNA
|

171124 | 172668 | + | 1545 | 28197945 | PD0133 | - | 16S ribosomal RNA |

172775 | 172850 | + | 76 | 28197945 | PD0134 | - | 02 Ala tRNA
|

172864 | 172940 | + | 77 | 28197945 | PD0135 | - | 14 Ile tRNA
|

173133 | 176015 | + | 2883 | 28197945 | PD0136 | - | 23S ribosomal RNA |

176143 | 176260 | + | 118 | 28197945 | PD0137 | - | 5S ribosomal RNA |

223170 | 223245 | - | 76 | 28197945 | PD0176 | - | 02 Ala tRNA
|

234764 | 234838 | - | 75 | 28197945 | PD0184 | - | 04 Glu tRNA
|

241438 | 241514 | + | 77 | 28197945 | PD0191 | - | 16 Met tRNA
|

307078 | 307153 | + | 76 | 28197945 | PD0237 | - | 17 Phe tRNA
|

317497 | 317581 | + | 85 | 28197945 | PD0247 | - | 15 Leu tRNA
|

428976 | 429328 | + | 353 | 28197945 | PD0335 | - | ribonuclease P catalytic RNA subunit |

431180 | 431266 | - | 87 | 28197945 | PD0339 | - | 15 Leu tRNA
|

431397 | 431472 | - | 76 | 28197945 | PD0340 | - | 04 Glu tRNA
|

431526 | 431601 | - | 76 | 28197945 | PD0341 | - | 02 Ala tRNA
|

506192 | 506276 | - | 85 | 28197945 | PD0411 | - | 15 Leu tRNA
|

558291 | 558377 | - | 87 | 28197945 | PD0467 | - | 15 Leu tRNA
|

562814 | 562897 | - | 84 | 28197945 | PD0470 | - | 15 Leu tRNA
|

569915 | 569989 | + | 75 | 28197945 | PD0476 | - | 13 Val tRNA
|

570020 | 570096 | + | 77 | 28197945 | PD0477 | - | 06 Asp tRNA
|

617865 | 617940 | - | 76 | 28197945 | PD0510 | - | 10 Lys tRNA
|

952980 | 953053 | - | 74 | 28197945 | PD0771 | - | 19 Cys tRNA
|

1142563 | 1142638 | - | 76 | 28197945 | PD0944 | - | 10 Lys tRNA
|

1263216 | 1263308 | + | 93 | 28197945 | PD1060 | - | 08 Ser tRNA
|

1275932 | 1276007 | + | 76 | 28197945 | PD1074 | - | 12 Thr tRNA
|

1279785 | 1279860 | - | 76 | 28197945 | PD1079 | - | 01 Gly tRNA
|

1287099 | 1287175 | - | 77 | 28197945 | PD1085 | - | 11 Arg tRNA
|

1417227 | 1417317 | - | 91 | 28197945 | PD1215 | - | 08 Ser tRNA
|

1556021 | 1556096 | + | 76 | 28197945 | PD1327 | - | 01 Gly tRNA
|

1670103 | 1670178 | - | 76 | 28197945 | PD1433 | - | 12 Thr tRNA
|

1738190 | 1738264 | - | 75 | 28197945 | PD1496 | - | 13 Val tRNA
|

1772646 | 1772735 | + | 90 | 28197945 | PD1526 | - | 08 Ser tRNA
|

1860993 | 1861069 | - | 77 | 28197945 | PD1609 | - | 07 Asn tRNA
|

1944465 | 1944541 | + | 77 | 28197945 | PD1675 | - | 16 Met tRNA
|

1944587 | 1944661 | + | 75 | 28197945 | PD1676 | - | 05 Gln tRNA
|

2020428 | 2020502 | - | 75 | 28197945 | PD1733 | - | 13 Val tRNA
|

2124945 | 2125021 | + | 77 | 28197945 | PD1821 | - | 03 Pro tRNA
|

2210084 | 2210157 | + | 74 | 28197945 | PD1880 | - | 01 Gly tRNA
|

2239487 | 2239563 | - | 77 | 28197945 | PD1908 | - | 03 Pro tRNA
|

2303865 | 2303942 | + | 78 | 28197945 | PD1961 | - | 11 Arg tRNA
|

2368420 | 2368495 | - | 76 | 28197945 | PD2008 | - | 20 Trp tRNA
|

2369847 | 2369922 | - | 76 | 28197945 | PD2010 | - | 12 Thr tRNA
|

2369965 | 2370038 | - | 74 | 28197945 | PD2011 | - | 01 Gly tRNA
|

2370072 | 2370157 | - | 86 | 28197945 | PD2012 | - | 18 Tyr tRNA
|

2373906 | 2373982 | - | 77 | 28197945 | PD2017 | - | 05 Gln tRNA
|

2447459 | 2447813 | + | 355 | 28197945 | PD2067 | - | tmRNA |

2489453 | 2489529 | + | 77 | 28197945 | PD2099 | - | 03 Pro tRNA
|

2489593 | 2489671 | + | 79 | 28197945 | PD2100 | - | 11 Arg tRNA
|

2489711 | 2489787 | + | 77 | 28197945 | PD2101 | - | 09 His tRNA
|

2489898 | 2489973 | + | 76 | 28197945 | PD2102 | - | 10 Lys tRNA
|