Материалы:NC 008639

LOCUS NC_008639 3133902 bp DNA circular BCT 12-DEC-2006 DEFINITION Chlorobium phaeobacteroides DSM 266, complete genome. ACCESSION NC_008639 VERSION NC_008639.1 GI:119355857 KEYWORDS . SOURCE Chlorobium phaeobacteroides DSM 266 ORGANISM Chlorobium phaeobacteroides DSM 266 Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium. REFERENCE 1 (bases 1 to 3133902) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Pitluck,S., Goltsman,E., Schmutz,J., Larimer,F., Land,M., Hauser,L., Mikhailova,N., Li,T., Overmann,J., Bryant,D.A. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Chlorobium phaeobacteroides DSM 266 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3133902) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (11-DEC-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3133902) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Pitluck,S., Goltsman,E., Schmutz,J., Larimer,F., Land,M., Hauser,L., Mikhailova,N., Li,T., Overmann,J., Bryant,D.A. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (05-DEC-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000492. URL -- http://www.jgi.doe.gov JGI Project ID: 3634474 Source DNA and bacteria available from Donald A. Bryant (dab14@psu.edu) Bacteria available from DSMZ: DSM 266 Contacts: Donald A. Bryant (dab14@psu.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

51893 | 51965 | - | 73 | 119355857 | Cpha266_R0001 | - | 12 Thr tRNA
|

193926 | 194001 | - | 76 | 119355857 | Cpha266_R0002 | - | 11 Arg tRNA
|

252936 | 253008 | + | 73 | 119355857 | Cpha266_R0003 | - | 12 Thr tRNA
|

253022 | 253104 | + | 83 | 119355857 | Cpha266_R0004 | - | 18 Tyr tRNA
|

253131 | 253203 | + | 73 | 119355857 | Cpha266_R0005 | - | 12 Thr tRNA
|

253227 | 253302 | + | 76 | 119355857 | Cpha266_R0006 | - | 20 Trp tRNA
|

337928 | 338001 | + | 74 | 119355857 | Cpha266_R0007 | - | 03 Pro tRNA
|

366885 | 366973 | - | 89 | 119355857 | Cpha266_R0008 | - | 15 Leu tRNA
|

436026 | 436098 | + | 73 | 119355857 | Cpha266_R0009 | - | 10 Lys tRNA
|

436115 | 436196 | + | 82 | 119355857 | Cpha266_R0010 | - | 15 Leu tRNA
|

473467 | 473542 | + | 76 | 119355857 | Cpha266_R0011 | - | 17 Phe tRNA
|

713392 | 713468 | + | 77 | 119355857 | Cpha266_R0012 | - | 13 Val tRNA
|

918432 | 918507 | - | 76 | 119355857 | Cpha266_R0013 | - | 05 Gln tRNA
|

919497 | 919570 | - | 74 | 119355857 | Cpha266_R0014 | - | 11 Arg tRNA
|

919575 | 919651 | - | 77 | 119355857 | Cpha266_R0015 | - | 04 Glu tRNA
|

919687 | 919760 | - | 74 | 119355857 | Cpha266_R0016 | - | 16 Met tRNA
|

1009928 | 1010327 | + | 400 | 119355857 | Cpha266_R0017 | - | tmRNA |

1048324 | 1048398 | + | 75 | 119355857 | Cpha266_R0018 | - | 05 Gln tRNA
|

1053155 | 1053227 | + | 73 | 119355857 | Cpha266_R0019 | - | 03 Pro tRNA
|

1053256 | 1053331 | + | 76 | 119355857 | Cpha266_R0020 | - | 11 Arg tRNA
|

1053357 | 1053430 | + | 74 | 119355857 | Cpha266_R0021 | - | 09 His tRNA
|

1053442 | 1053513 | + | 72 | 119355857 | Cpha266_R0022 | - | 04 Glu tRNA
|

1059928 | 1060003 | + | 76 | 119355857 | Cpha266_R0023 | - | 10 Lys tRNA
|

1099660 | 1099746 | - | 87 | 119355857 | Cpha266_R0024 | - | 15 Leu tRNA
|

1099807 | 1099888 | - | 82 | 119355857 | Cpha266_R0025 | - | 15 Leu tRNA
|

1150601 | 1150676 | - | 76 | 119355857 | Cpha266_R0026 | - | 16 Met tRNA
|

1327970 | 1328042 | + | 73 | 119355857 | Cpha266_R0027 | - | 11 Arg tRNA
|

1328059 | 1328131 | + | 73 | 119355857 | Cpha266_R0028 | - | 03 Pro tRNA
|

1663969 | 1664045 | + | 77 | 119355857 | Cpha266_R0029 | - | 13 Val tRNA
|

1719488 | 1719561 | + | 74 | 119355857 | Cpha266_R0030 | - | 19 Cys tRNA
|

1850219 | 1850311 | - | 93 | 119355857 | Cpha266_R0031 | - | 08 Ser tRNA
|

1850324 | 1850409 | - | 86 | 119355857 | Cpha266_R0032 | - | 08 Ser tRNA
|

1850607 | 1850697 | - | 91 | 119355857 | Cpha266_R0033 | - | 08 Ser tRNA
|

1872397 | 1872470 | + | 74 | 119355857 | Cpha266_R0034 | - | 16 Met tRNA
|

1872482 | 1872557 | + | 76 | 119355857 | Cpha266_R0035 | - | 01 Gly tRNA
|

1953685 | 1953769 | + | 85 | 119355857 | Cpha266_R0036 | - | 15 Leu tRNA
|

1954821 | 1955167 | + | 347 | 119355857 | Cpha266_R0037 | - | RNaseP RNA |

2254342 | 2254414 | + | 73 | 119355857 | Cpha266_R0038 | - | 01 Gly tRNA
|

2254640 | 2254729 | + | 90 | 119355857 | Cpha266_R0039 | - | 08 Ser tRNA
|

2296966 | 2297038 | + | 73 | 119355857 | Cpha266_R0040 | - | 02 Ala tRNA
|

2417293 | 2417367 | + | 75 | 119355857 | Cpha266_R0041 | - | 06 Asp tRNA
|

2793075 | 2793147 | - | 73 | 119355857 | Cpha266_R0042 | - | 01 Gly tRNA
|

2855225 | 2855296 | - | 72 | 119355857 | Cpha266_R0043 | - | 07 Asn tRNA
|

2895049 | 2895158 | - | 110 | 119355857 | Cpha266_R0044 | - | 5S ribosomal RNA |

2895264 | 2898182 | - | 2919 | 119355857 | Cpha266_R0045 | - | 23S ribosomal RNA |

2898388 | 2898463 | - | 76 | 119355857 | Cpha266_R0046 | - | 02 Ala tRNA
|

2898497 | 2898573 | - | 77 | 119355857 | Cpha266_R0047 | - | 14 Ile tRNA
|

2898750 | 2900243 | - | 1494 | 119355857 | Cpha266_R0048 | - | 16S ribosomal RNA |

3047185 | 3047294 | - | 110 | 119355857 | Cpha266_R0049 | - | 5S ribosomal RNA |

3047399 | 3050317 | - | 2919 | 119355857 | Cpha266_R0050 | - | 23S ribosomal RNA |

3050523 | 3050598 | - | 76 | 119355857 | Cpha266_R0051 | - | 02 Ala tRNA
|

3050632 | 3050708 | - | 77 | 119355857 | Cpha266_R0052 | - | 14 Ile tRNA
|

3050885 | 3052378 | - | 1494 | 119355857 | Cpha266_R0053 | - | 16S ribosomal RNA |

3074175 | 3074248 | - | 74 | 119355857 | Cpha266_R0054 | - | 13 Val tRNA
|

3092183 | 3092288 | - | 106 | 119355857 | Cpha266_R0055 | - | SRP RNA; RNA component of signal recognition particle |

3098078 | 3098150 | - | 73 | 119355857 | Cpha266_R0056 | - | 02 Ala tRNA
|