Материалы:NC 007413

LOCUS NC_007413 6365727 bp DNA circular BCT 16-JUN-2006 DEFINITION Anabaena variabilis ATCC 29413, complete genome. ACCESSION NC_007413 VERSION NC_007413.1 GI:75906225 KEYWORDS . SOURCE Anabaena variabilis ATCC 29413 (Anabaena flos-aquae UTEX 1444) ORGANISM Anabaena variabilis ATCC 29413 Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena. REFERENCE 1 (bases 1 to 6365727) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Saunders,E.H., Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Mavrommatis,K. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Anabaena variabilis ATCC 29413 JOURNAL Unpublished REFERENCE 2 (bases 1 to 6365727) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-SEP-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 6365727) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Saunders,E.H., Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Mavrommatis,K. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (12-SEP-2005) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000117. URL -- http://www.jgi.doe.gov Source DNA available from Teresa Thiel (thiel@umsl.edu) Bacteria available from ATCC: ATCC 29413 Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

238314 | 238386 | - | 73 | 75906225 | Ava_R0001 | - | 11 Arg tRNA
|

505303 | 505384 | + | 82 | 75906225 | Ava_R0002 | - | 15 Leu tRNA
|

649912 | 649992 | - | 81 | 75906225 | Ava_R0003 | - | 15 Leu tRNA
|

906064 | 906140 | - | 77 | 75906225 | Ava_R0004 | - | 16 Met tRNA
|

977788 | 978168 | + | 381 | 75906225 | Ava_R0005 | - | RNA component of RNaseP |

1002918 | 1004405 | + | 1488 | 75906225 | Ava_R0006 | - | 16S ribosomal RNA |

1004524 | 1004600 | + | 77 | 75906225 | Ava_R0007 | - | 14 Ile tRNA
|

1004675 | 1004747 | + | 73 | 75906225 | Ava_R0008 | - | 02 Ala tRNA
|

1004909 | 1007738 | + | 2830 | 75906225 | Ava_R0009 | - | 23S ribosomal RNA |

1007817 | 1007904 | + | 88 | 75906225 | Ava_R0010 | - | 5S ribosomal RNA |

1181925 | 1182011 | - | 87 | 75906225 | Ava_R0011 | - | 08 Ser tRNA
|

1219577 | 1219650 | - | 74 | 75906225 | Ava_R0012 | - | 13 Val tRNA
|

1424275 | 1424348 | - | 74 | 75906225 | Ava_R0013 | - | 03 Pro tRNA
|

1768581 | 1768664 | - | 84 | 75906225 | Ava_R0014 | - | 15 Leu tRNA
|

1777233 | 1777314 | + | 82 | 75906225 | Ava_R0015 | - | 15 Leu tRNA
|

1828001 | 1828074 | + | 74 | 75906225 | Ava_R0016 | - | 03 Pro tRNA
|

2133900 | 2133971 | - | 72 | 75906225 | Ava_R0017 | - | 01 Gly tRNA
|

2470889 | 2470973 | - | 85 | 75906225 | Ava_R0018 | - | 08 Ser tRNA
|

2494613 | 2494686 | - | 74 | 75906225 | Ava_R0019 | - | 03 Pro tRNA
|

2508405 | 2508478 | - | 74 | 75906225 | Ava_R0020 | - | 16 Met tRNA
|

2728122 | 2728193 | - | 72 | 75906225 | Ava_R0021 | - | 12 Thr tRNA
|

2805098 | 2805185 | - | 88 | 75906225 | Ava_R0022 | - | 5S ribosomal RNA |

2805264 | 2808093 | - | 2830 | 75906225 | Ava_R0023 | - | 23S ribosomal RNA |

2808379 | 2809868 | - | 1490 | 75906225 | Ava_R0024 | - | 16S ribosomal RNA |

2938911 | 2938983 | - | 73 | 75906225 | Ava_R0025 | - | 16 Met tRNA
|

3109711 | 3109782 | + | 72 | 75906225 | Ava_R0026 | - | 07 Asn tRNA
|

3123086 | 3123157 | + | 72 | 75906225 | Ava_R0027 | - | 10 Lys tRNA
|

3152762 | 3152834 | + | 73 | 75906225 | Ava_R0028 | - | 20 Trp tRNA
|

3175621 | 3175692 | - | 72 | 75906225 | Ava_R0029 | - | 19 Cys tRNA
|

3230989 | 3231376 | + | 388 | 75906225 | Ava_R0030 | - | tmRNA |

3373701 | 3373777 | - | 77 | 75906225 | Ava_R0031 | - | 11 Arg tRNA
|

3497796 | 3497868 | + | 73 | 75906225 | Ava_R0032 | - | 02 Ala tRNA
|

3620822 | 3620894 | - | 73 | 75906225 | Ava_R0033 | - | 13 Val tRNA
|

3626041 | 3626113 | - | 73 | 75906225 | Ava_R0034 | - | 09 His tRNA
|

3894075 | 3895562 | + | 1488 | 75906225 | Ava_R0035 | - | 16S ribosomal RNA |

3895681 | 3895757 | + | 77 | 75906225 | Ava_R0036 | - | 14 Ile tRNA
|

3895832 | 3895904 | + | 73 | 75906225 | Ava_R0037 | - | 02 Ala tRNA
|

3896066 | 3898895 | + | 2830 | 75906225 | Ava_R0038 | - | 23S ribosomal RNA |

3898974 | 3899061 | + | 88 | 75906225 | Ava_R0039 | - | 5S ribosomal RNA |

3948182 | 3948253 | + | 72 | 75906225 | Ava_R0040 | - | 12 Thr tRNA
|

4023869 | 4023939 | + | 71 | 75906225 | Ava_R0041 | - | 01 Gly tRNA
|

4227295 | 4227368 | - | 74 | 75906225 | Ava_R0042 | - | 11 Arg tRNA
|

4251344 | 4251416 | + | 73 | 75906225 | Ava_R0043 | - | 02 Ala tRNA
|

4716359 | 4716431 | - | 73 | 75906225 | Ava_R0044 | - | 02 Ala tRNA
|

4743213 | 4743297 | + | 85 | 75906225 | Ava_R0045 | - | 08 Ser tRNA
|

5209413 | 5209484 | - | 72 | 75906225 | Ava_R0046 | - | 01 Gly tRNA
|

5292215 | 5292286 | - | 72 | 75906225 | Ava_R0047 | - | 05 Gln tRNA
|

5364031 | 5364102 | + | 72 | 75906225 | Ava_R0048 | - | 10 Lys tRNA
|

5432377 | 5432464 | - | 88 | 75906225 | Ava_R0049 | - | 5S ribosomal RNA |

5432543 | 5435372 | - | 2830 | 75906225 | Ava_R0050 | - | 23S ribosomal RNA |

5435534 | 5435606 | - | 73 | 75906225 | Ava_R0051 | - | 02 Ala tRNA
|

5435681 | 5435757 | - | 77 | 75906225 | Ava_R0052 | - | 14 Ile tRNA
|

5435874 | 5437363 | - | 1490 | 75906225 | Ava_R0053 | - | 16S ribosomal RNA |

5535659 | 5535760 | - | 102 | 75906225 | Ava_R0054 | - | SRP RNA; RNA component of signal recognitionparticle |

5557813 | 5557885 | - | 73 | 75906225 | Ava_R0055 | - | 17 Phe tRNA
|

5580255 | 5580330 | + | 76 | 75906225 | Ava_R0056 | - | 04 Glu tRNA
|

5802515 | 5802589 | + | 75 | 75906225 | Ava_R0057 | - | 07 Asn tRNA
|

6024507 | 6024598 | - | 92 | 75906225 | Ava_R0058 | - | 08 Ser tRNA
|

6126002 | 6126075 | - | 74 | 75906225 | Ava_R0059 | - | 06 Asp tRNA
|

6278819 | 6278904 | + | 86 | 75906225 | Ava_R0060 | - | 18 Tyr tRNA
|

6278962 | 6279033 | + | 72 | 75906225 | Ava_R0061 | - | 12 Thr tRNA
|

6341525 | 6341598 | - | 74 | 75906225 | Ava_R0062 | - | 11 Arg tRNA
|