Материалы:NC 008532

LOCUS NC_008532 1856368 bp DNA circular BCT 14-AUG-2007 DEFINITION Streptococcus thermophilus LMD-9, complete genome. ACCESSION NC_008532 VERSION NC_008532.1 GI:116626972 KEYWORDS . SOURCE Streptococcus thermophilus LMD-9 ORGANISM Streptococcus thermophilus LMD-9 Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. REFERENCE 1 (bases 1 to 1856368) AUTHORS Makarova,K., Slesarev,A., Wolf,Y., Sorokin,A., Mirkin,B., Koonin,E., Pavolv,A., Pavlova,N., Karamychev,V., Polouchine,N., Shakhova,V., Grigoriev,I., Lou,Y., Rohksar,D., Lucas,S., Huang,K., Goldstein,D.M., Hawkins,T., Plengvidhya,V., Welker,D., Hughes,J., Goh,Y., Benson,A., Baldwin,K., Lee,J.-H., Diaz-Muniz,I., Dosti,B., Smeianov,V., Wechter,W., Barabote,R., Lorca,G., Altermann,E., Barrangou,R., Ganesan,B., Xie,Y., Rawsthorne,H., Tamir,D., Parker,C., Breidt,F., Broadbent,J., Hutkins,R., O'Sulllivan,D., Steele,J., Unlu,G., Saier,M., Klaenhammer,T., Richardson,P., Kozyavkin,S., Weimer,B. and Mills,D. TITLE Comparative genomics of the lactic acid bacteria JOURNAL Proc. Natl. Acad. Sci. U.S.A. 103 (42), 15611-15616 (2006) PUBMED 17030793 REFERENCE 2 (bases 1 to 1856368) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-OCT-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1856368) AUTHORS Lucas,S., Copeland,A., Detter,J.C., Glavina del Rio,T., Pitluck,S., Grigoriev,I., Rokhsar,D., Slesarev,A., Pavlov,A., Pavlova,N., Karamychev,V., Polouchine,N., Shakhova,V., Kozyavkin,S., Makarova,K., Koonin,E., Mills,D.A. and Richardson,P. CONSRTM US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc. TITLE Direct Submission JOURNAL Submitted (22-JUN-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000419. URL -- http://www.jgi.doe.gov JGI Project ID: 2662188 Source DNA and bacteria available from Robert Hutkins (rhutkins1@unl.edu) Contacts: Robert Hutkins (rhutkins1@unl.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Annotation done by Kira Makarova and Eugene Koonin Finishing done by Fidelity Systems Inc. (Gaithersburg)URL -- http://www.fidelitysystems.com Project Information available at: http://genome.jgi-psf.org/mic_home.html The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

19146 | 20695 | + | 1550 | 116626972 | STER_r0019 | - | 16S ribosomal RNA |

20747 | 20819 | + | 73 | 116626972 | STER_t0020 | - | 02 Ala tRNA
|

20967 | 23868 | + | 2902 | 116626972 | STER_r0021 | - | 23S ribosomal RNA |

23943 | 24066 | + | 124 | 116626972 | STER_r0022 | - | 5S ribosomal RNA |

24070 | 24142 | + | 73 | 116626972 | STER_t0023 | - | 13 Val tRNA
|

24145 | 24217 | + | 73 | 116626972 | STER_t0024 | - | 06 Asp tRNA
|

24237 | 24309 | + | 73 | 116626972 | STER_t0025 | - | 10 Lys tRNA
|

24315 | 24395 | + | 81 | 116626972 | STER_t0026 | - | 15 Leu tRNA
|

24410 | 24482 | + | 73 | 116626972 | STER_t0027 | - | 12 Thr tRNA
|

24489 | 24560 | + | 72 | 116626972 | STER_t0028 | - | 01 Gly tRNA
|

24567 | 24652 | + | 86 | 116626972 | STER_t0029 | - | 15 Leu tRNA
|

24667 | 24740 | + | 74 | 116626972 | STER_t0030 | - | 11 Arg tRNA
|

24748 | 24821 | + | 74 | 116626972 | STER_t0031 | - | 03 Pro tRNA
|

24827 | 24900 | + | 74 | 116626972 | STER_t0032 | - | 16 Met tRNA
|

24915 | 24988 | + | 74 | 116626972 | STER_t0033 | - | 16 Met tRNA
|

25008 | 25097 | + | 90 | 116626972 | STER_t0034 | - | 08 Ser tRNA
|

25107 | 25180 | + | 74 | 116626972 | STER_t0035 | - | 16 Met tRNA
|

25184 | 25256 | + | 73 | 116626972 | STER_t0036 | - | 17 Phe tRNA
|

25269 | 25339 | + | 71 | 116626972 | STER_t0037 | - | 01 Gly tRNA
|

25373 | 25446 | + | 74 | 116626972 | STER_t0038 | - | 14 Ile tRNA
|

25451 | 25538 | + | 88 | 116626972 | STER_t0039 | - | 08 Ser tRNA
|

66808 | 68357 | + | 1550 | 116626972 | STER_r0079 | - | 16S ribosomal RNA |

68409 | 68481 | + | 73 | 116626972 | STER_t0080 | - | 02 Ala tRNA
|

68629 | 71530 | + | 2902 | 116626972 | STER_r0081 | - | 23S ribosomal RNA |

71605 | 71728 | + | 124 | 116626972 | STER_r0082 | - | 5S ribosomal RNA |

71732 | 71804 | + | 73 | 116626972 | STER_t0083 | - | 13 Val tRNA
|

71809 | 71879 | + | 71 | 116626972 | STER_t0084 | - | 01 Gly tRNA
|

71913 | 71986 | + | 74 | 116626972 | STER_t0085 | - | 14 Ile tRNA
|

71993 | 72064 | + | 72 | 116626972 | STER_t0086 | - | 04 Glu tRNA
|

72073 | 72162 | + | 90 | 116626972 | STER_t0087 | - | 08 Ser tRNA
|

72172 | 72245 | + | 74 | 116626972 | STER_t0088 | - | 16 Met tRNA
|

72249 | 72321 | + | 73 | 116626972 | STER_t0089 | - | 17 Phe tRNA
|

72336 | 72416 | + | 81 | 116626972 | STER_t0090 | - | 18 Tyr tRNA
|

72422 | 72492 | + | 71 | 116626972 | STER_t0091 | - | 20 Trp tRNA
|

72504 | 72576 | + | 73 | 116626972 | STER_t0092 | - | 09 His tRNA
|

72583 | 72654 | + | 72 | 116626972 | STER_t0093 | - | 05 Gln tRNA
|

72664 | 72747 | + | 84 | 116626972 | STER_t0094 | - | 15 Leu tRNA
|

82571 | 82641 | + | 71 | 116626972 | STER_t0104 | - | 19 Cys tRNA
|

141017 | 142566 | + | 1550 | 116626972 | STER_r0168 | - | 16S ribosomal RNA |

142618 | 142690 | + | 73 | 116626972 | STER_t0169 | - | 02 Ala tRNA
|

142838 | 145739 | + | 2902 | 116626972 | STER_r0170 | - | 23S ribosomal RNA |

145814 | 145937 | + | 124 | 116626972 | STER_r0171 | - | 5S ribosomal RNA |

145941 | 146013 | + | 73 | 116626972 | STER_t0172 | - | 13 Val tRNA
|

146016 | 146088 | + | 73 | 116626972 | STER_t0173 | - | 06 Asp tRNA
|

146108 | 146180 | + | 73 | 116626972 | STER_t0174 | - | 10 Lys tRNA
|

146186 | 146267 | + | 82 | 116626972 | STER_t0175 | - | 15 Leu tRNA
|

146282 | 146354 | + | 73 | 116626972 | STER_t0176 | - | 12 Thr tRNA
|

146361 | 146432 | + | 72 | 116626972 | STER_t0177 | - | 01 Gly tRNA
|

146439 | 146524 | + | 86 | 116626972 | STER_t0178 | - | 15 Leu tRNA
|

146539 | 146612 | + | 74 | 116626972 | STER_t0179 | - | 11 Arg tRNA
|

146620 | 146693 | + | 74 | 116626972 | STER_t0180 | - | 03 Pro tRNA
|

146823 | 148372 | + | 1550 | 116626972 | STER_r0181 | - | 16S ribosomal RNA |

148424 | 148496 | + | 73 | 116626972 | STER_t0182 | - | 02 Ala tRNA
|

148644 | 151545 | + | 2902 | 116626972 | STER_r0183 | - | 23S ribosomal RNA |

151620 | 151746 | + | 127 | 116626972 | STER_r0184 | - | 5S ribosomal RNA |

151747 | 151820 | + | 74 | 116626972 | STER_t0185 | - | 07 Asn tRNA
|

240635 | 240963 | + | 329 | 116626972 | STER_r0281 | - | RNA_RNaseP_classB |

359455 | 361004 | + | 1550 | 116626972 | STER_r0409 | - | 16S ribosomal RNA |

361056 | 361128 | + | 73 | 116626972 | STER_t0410 | - | 02 Ala tRNA
|

361276 | 364177 | + | 2902 | 116626972 | STER_r0411 | - | 23S ribosomal RNA |

364252 | 364375 | + | 124 | 116626972 | STER_r0412 | - | 5S ribosomal RNA |

364379 | 364451 | + | 73 | 116626972 | STER_t0413 | - | 13 Val tRNA
|

364454 | 364526 | + | 73 | 116626972 | STER_t0414 | - | 06 Asp tRNA
|

364546 | 364618 | + | 73 | 116626972 | STER_t0415 | - | 10 Lys tRNA
|

364624 | 364705 | + | 82 | 116626972 | STER_t0416 | - | 15 Leu tRNA
|

364721 | 364793 | + | 73 | 116626972 | STER_t0417 | - | 12 Thr tRNA
|

364801 | 364872 | + | 72 | 116626972 | STER_t0418 | - | 04 Glu tRNA
|

581030 | 581110 | + | 81 | 116626972 | STER_t0637 | - | 18 Tyr tRNA
|

581179 | 581253 | + | 75 | 116626972 | STER_t0638 | - | 05 Gln tRNA
|

582642 | 582713 | + | 72 | 116626972 | STER_t0640 | - | 11 Arg tRNA
|

583008 | 583357 | + | 350 | 116626972 | STER_s0641 | - | tmRNA |

1056424 | 1056495 | - | 72 | 116626972 | STER_t1143 | - | 11 Arg tRNA
|

1295508 | 1295579 | - | 72 | 116626972 | STER_t1385 | - | 04 Glu tRNA
|

1295609 | 1295680 | - | 72 | 116626972 | STER_t1386 | - | 05 Gln tRNA
|

1390866 | 1390936 | - | 71 | 116626972 | STER_t1484 | - | 12 Thr tRNA
|

1471347 | 1471433 | - | 87 | 116626972 | STER_t1568 | - | 08 Ser tRNA
|

1657087 | 1657169 | + | 83 | 116626972 | STER_t1771 | - | 15 Leu tRNA
|

1662293 | 1662366 | - | 74 | 116626972 | STER_t1780 | - | 07 Asn tRNA
|

1662369 | 1662495 | - | 127 | 116626972 | STER_r1781 | - | 5S ribosomal RNA |

1662570 | 1665470 | - | 2901 | 116626972 | STER_r1782 | - | 23S ribosomal RNA |

1665616 | 1665688 | - | 73 | 116626972 | STER_t1783 | - | 02 Ala tRNA
|

1665742 | 1667291 | - | 1550 | 116626972 | STER_r1784 | - | 16S ribosomal RNA |

1752198 | 1752283 | - | 86 | 116626972 | STER_t1877 | - | 15 Leu tRNA
|

1793499 | 1793574 | - | 76 | 116626972 | STER_t1934 | - | 10 Lys tRNA
|

1852325 | 1852398 | - | 74 | 116626972 | STER_t1997 | - | 07 Asn tRNA
|

1852421 | 1852492 | - | 72 | 116626972 | STER_t1998 | - | 04 Glu tRNA
|

1852680 | 1852753 | + | 74 | 116626972 | STER_t1999 | - | 11 Arg tRNA
|