Материалы:NC 004070

```
LOCUS NC_004070 1900521 bp DNA circular BCT 17-JAN-2006
DEFINITION Streptococcus pyogenes MGAS315, complete genome.
ACCESSION NC_004070
VERSION NC_004070.1 GI:21909536
KEYWORDS .
SOURCE Streptococcus pyogenes MGAS315
ORGANISM Streptococcus pyogenes MGAS315
Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;
Streptococcus.
REFERENCE 1 (bases 1 to 1900521)
AUTHORS Beres,S.B., Sylva,G.L., Barbian,K.D., Lei,B., Hoff,J.S.,
Mammarella,N.D., Liu,M.-Y., Smoot,J.C., Porcella,S.F.,
Parkins,L.D., McCormick,J.K., Leung,D.Y.M., Schlievert,P.M. and
Musser,J.M.
TITLE Genome sequence of a serotype M3 strain of group A Streptococcus:
phage-encoded toxins, the high-virulence phenotype, and clone
emergence
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (15), 10078-10083 (2002)
PUBMED 12122206
REFERENCE 2 (bases 1 to 1900521)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-JUL-2002) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1900521)
AUTHORS Beres,S.B., Sylva,G.L., Barbian,K.D., Lei,B., Hoff,J.S.,
Mammarella,N.D., Liu,M.-Y., Smoot,J.C., Porcella,S.F.,
Parkins,L.D., McCormick,J.K., Leung,D.Y.M., Schlievert,P.M. and
Musser,J.M.
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2002) Laboratory of Human-Bacterial Pathogenesis,
Rocky Mountain Laboratories, NIAID, NIH, 903 South Fourth St.,
Hamilton, MT 59840, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE014074.
regions of prohages are represented by misc_features. Complete
genome of 6 S.pygenes prophages can be found as separate proviral
genome records: 749108..788645 NC_004584 - Streptococcus pyogenes
phage 315.1 977267..1018338 NC_004585 - Streptococcus pyogenes
phage 315.2 c1137554..1171972 NC_004586 - Streptococcus pyogenes
phage 315.3 c1230115..1271910 NC_004587 - Streptococcus pyogenes
phage 315.4 c1313194..1351399 NC_004588 - Streptococcus pyogenes
phage 315.5 c1410542..1450555 NC_004589 - Streptococcus pyogenes
phage 315.6.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

17066 | 18620 | + | 1555 | 21909536 | SpyM3_r01 | - | 16S ribosomal RNA |

18665 | 18740 | + | 76 | 21909536 | SpyM3_t01 | - | 02 Ala tRNA
|

19036 | 21941 | + | 2906 | 21909536 | SpyM3_r02 | - | 23S ribosomal RNA |

22023 | 22140 | + | 118 | 21909536 | SpyM3_r13 | - | 5S ribosomal RNA |

22158 | 22230 | + | 73 | 21909536 | SpyM3_t02 | - | 13 Val tRNA
|

22248 | 22320 | + | 73 | 21909536 | SpyM3_t03 | - | 06 Asp tRNA
|

22352 | 22424 | + | 73 | 21909536 | SpyM3_t04 | - | 10 Lys tRNA
|

22430 | 22511 | + | 82 | 21909536 | SpyM3_t05 | - | 15 Leu tRNA
|

22522 | 22594 | + | 73 | 21909536 | SpyM3_t06 | - | 12 Thr tRNA
|

22607 | 22678 | + | 72 | 21909536 | SpyM3_t07 | - | 01 Gly tRNA
|

22687 | 22771 | + | 85 | 21909536 | SpyM3_t08 | - | 15 Leu tRNA
|

22788 | 22864 | + | 77 | 21909536 | SpyM3_t09 | - | 11 Arg tRNA
|

22868 | 22941 | + | 74 | 21909536 | SpyM3_t10 | - | 03 Pro tRNA
|

23068 | 24622 | + | 1555 | 21909536 | SpyM3_r03 | - | 16S ribosomal RNA |

24667 | 24742 | + | 76 | 21909536 | SpyM3_t11 | - | 02 Ala tRNA
|

25038 | 27943 | + | 2906 | 21909536 | SpyM3_r04 | - | 23S ribosomal RNA |

28025 | 28142 | + | 118 | 21909536 | SpyM3_r14 | - | 5S ribosomal RNA |

28160 | 28232 | + | 73 | 21909536 | SpyM3_t12 | - | 13 Val tRNA
|

28250 | 28322 | + | 73 | 21909536 | SpyM3_t13 | - | 06 Asp tRNA
|

28354 | 28426 | + | 73 | 21909536 | SpyM3_t14 | - | 10 Lys tRNA
|

28432 | 28513 | + | 82 | 21909536 | SpyM3_t15 | - | 15 Leu tRNA
|

28524 | 28596 | + | 73 | 21909536 | SpyM3_t16 | - | 12 Thr tRNA
|

28609 | 28680 | + | 72 | 21909536 | SpyM3_t17 | - | 01 Gly tRNA
|

28689 | 28773 | + | 85 | 21909536 | SpyM3_t18 | - | 15 Leu tRNA
|

28790 | 28866 | + | 77 | 21909536 | SpyM3_t19 | - | 11 Arg tRNA
|

28870 | 28943 | + | 74 | 21909536 | SpyM3_t20 | - | 03 Pro tRNA
|

28949 | 29022 | + | 74 | 21909536 | SpyM3_t21 | - | 16 Met tRNA
|

29043 | 29116 | + | 74 | 21909536 | SpyM3_t22 | - | 16 Met tRNA
|

29139 | 29228 | + | 90 | 21909536 | SpyM3_t23 | - | 08 Ser tRNA
|

29238 | 29311 | + | 74 | 21909536 | SpyM3_t24 | - | 16 Met tRNA
|

29332 | 29404 | + | 73 | 21909536 | SpyM3_t25 | - | 17 Phe tRNA
|

29417 | 29487 | + | 71 | 21909536 | SpyM3_t26 | - | 01 Gly tRNA
|

29522 | 29595 | + | 74 | 21909536 | SpyM3_t27 | - | 14 Ile tRNA
|

29605 | 29692 | + | 88 | 21909536 | SpyM3_t28 | - | 08 Ser tRNA
|

80046 | 81600 | + | 1555 | 21909536 | SpyM3_r05 | - | 16S ribosomal RNA |

81645 | 81720 | + | 76 | 21909536 | SpyM3_t29 | - | 02 Ala tRNA
|

82016 | 84920 | + | 2905 | 21909536 | SpyM3_r06 | - | 23S ribosomal RNA |

85002 | 85119 | + | 118 | 21909536 | SpyM3_r15 | - | 5S ribosomal RNA |

85137 | 85209 | + | 73 | 21909536 | SpyM3_t30 | - | 13 Val tRNA
|

85215 | 85285 | + | 71 | 21909536 | SpyM3_t31 | - | 01 Gly tRNA
|

85320 | 85393 | + | 74 | 21909536 | SpyM3_t32 | - | 14 Ile tRNA
|

85416 | 85487 | + | 72 | 21909536 | SpyM3_t33 | - | 04 Glu tRNA
|

85498 | 85587 | + | 90 | 21909536 | SpyM3_t34 | - | 08 Ser tRNA
|

85597 | 85670 | + | 74 | 21909536 | SpyM3_t35 | - | 16 Met tRNA
|

85691 | 85763 | + | 73 | 21909536 | SpyM3_t36 | - | 17 Phe tRNA
|

85783 | 85863 | + | 81 | 21909536 | SpyM3_t37 | - | 18 Tyr tRNA
|

85870 | 85940 | + | 71 | 21909536 | SpyM3_t38 | - | 20 Trp tRNA
|

85952 | 86024 | + | 73 | 21909536 | SpyM3_t39 | - | 09 His tRNA
|

86033 | 86104 | + | 72 | 21909536 | SpyM3_t40 | - | 05 Gln tRNA
|

86124 | 86207 | + | 84 | 21909536 | SpyM3_t41 | - | 15 Leu tRNA
|

256188 | 257742 | + | 1555 | 21909536 | SpyM3_r07 | - | 16S ribosomal RNA |

257787 | 257862 | + | 76 | 21909536 | SpyM3_t42 | - | 02 Ala tRNA
|

258158 | 261063 | + | 2906 | 21909536 | SpyM3_r08 | - | 23S ribosomal RNA |

261145 | 261262 | + | 118 | 21909536 | SpyM3_r16 | - | 5S ribosomal RNA |

261268 | 261341 | + | 74 | 21909536 | SpyM3_t43 | - | 07 Asn tRNA
|

261421 | 261494 | + | 74 | 21909536 | SpyM3_t44 | - | 11 Arg tRNA
|

521499 | 521570 | + | 72 | 21909536 | SpyM3_t45 | - | 11 Arg tRNA
|

689643 | 689723 | + | 81 | 21909536 | SpyM3_t46 | - | 18 Tyr tRNA
|

689796 | 689870 | + | 75 | 21909536 | SpyM3_t47 | - | 05 Gln tRNA
|

691312 | 691383 | + | 72 | 21909536 | SpyM3_t48 | - | 11 Arg tRNA
|

976938 | 977282 | + | 345 | 21909536 | SpyM3_s01 | - | tmRNA |

1283233 | 1283303 | + | 71 | 21909536 | SpyM3_t49 | - | 12 Thr tRNA
|

1353919 | 1353990 | - | 72 | 21909536 | SpyM3_t50 | - | 04 Glu tRNA
|

1354013 | 1354086 | - | 74 | 21909536 | SpyM3_t51 | - | 14 Ile tRNA
|

1354122 | 1354194 | - | 73 | 21909536 | SpyM3_t52 | - | 12 Thr tRNA
|

1354205 | 1354286 | - | 82 | 21909536 | SpyM3_t53 | - | 15 Leu tRNA
|

1354292 | 1354364 | - | 73 | 21909536 | SpyM3_t54 | - | 10 Lys tRNA
|

1354396 | 1354468 | - | 73 | 21909536 | SpyM3_t55 | - | 06 Asp tRNA
|

1354486 | 1354558 | - | 73 | 21909536 | SpyM3_t56 | - | 13 Val tRNA
|

1354576 | 1354693 | - | 118 | 21909536 | SpyM3_r17 | - | 5S ribosomal RNA |

1354775 | 1357680 | - | 2906 | 21909536 | SpyM3_r09 | - | 23S ribosomal RNA |

1357976 | 1358051 | - | 76 | 21909536 | SpyM3_t57 | - | 02 Ala tRNA
|

1358096 | 1359650 | - | 1555 | 21909536 | SpyM3_r10 | - | 16S ribosomal RNA |

1493756 | 1493842 | - | 87 | 21909536 | SpyM3_t58 | - | 08 Ser tRNA
|

1631764 | 1631849 | - | 86 | 21909536 | SpyM3_t59 | - | 15 Leu tRNA
|

1641465 | 1641538 | - | 74 | 21909536 | SpyM3_t60 | - | 11 Arg tRNA
|

1641618 | 1641691 | - | 74 | 21909536 | SpyM3_t61 | - | 07 Asn tRNA
|

1641697 | 1641814 | - | 118 | 21909536 | SpyM3_r18 | - | 5S ribosomal RNA |

1641896 | 1644801 | - | 2906 | 21909536 | SpyM3_r11 | - | 23S ribosomal RNA |

1645097 | 1645172 | - | 76 | 21909536 | SpyM3_t62 | - | 02 Ala tRNA
|

1645217 | 1646771 | - | 1555 | 21909536 | SpyM3_r12 | - | 16S ribosomal RNA |

1731541 | 1731613 | + | 73 | 21909536 | SpyM3_t63 | - | 10 Lys tRNA
|

1791364 | 1791434 | - | 71 | 21909536 | SpyM3_t64 | - | 19 Cys tRNA
|

1895993 | 1896066 | - | 74 | 21909536 | SpyM3_t65 | - | 07 Asn tRNA
|

1896100 | 1896171 | + | 72 | 21909536 | SpyM3_t66 | - | 04 Glu tRNA
|

1897512 | 1897585 | + | 74 | 21909536 | SpyM3_t67 | - | 11 Arg tRNA
|