Материалы:NC 007760

LOCUS NC_007760 5013479 bp DNA circular BCT 31-MAR-2006 DEFINITION Anaeromyxobacter dehalogenans 2CP-C, complete genome. ACCESSION NC_007760 VERSION NC_007760.1 GI:86156430 KEYWORDS . SOURCE Anaeromyxobacter dehalogenans 2CP-C ORGANISM Anaeromyxobacter dehalogenans 2CP-C Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Anaeromyxobacter. REFERENCE 1 (bases 1 to 5013479) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Brettin,T., Bruce,D., Han,C., Tapia,R., Gilna,P., Kiss,H., Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Anderson,I., Sanford,R.A., Ritalahti,K.M., Thomas,H.S., Kirby,J.R., Zhulin,I.B., Loeffler,F.E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Anaeromyxobacter dehalogenans 2CP-C JOURNAL Unpublished REFERENCE 2 (bases 1 to 5013479) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (30-JAN-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5013479) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Brettin,T., Bruce,D., Han,C., Tapia,R., Gilna,P., Kiss,H., Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Anderson,I., Sanford,R.A., Ritalahti,K.M., Thomas,H.S., Kirby,J.R., Zhulin,I.B., Loeffler,F.E. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (24-JAN-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000251. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Frank Loeffler (frank.loeffler@ce.gatech.edu) Contact: Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

7820 | 7893 | + | 74 | 86156430 | Adeh_R0001 | - | 05 Gln tRNA
|

20677 | 20749 | + | 73 | 86156430 | Adeh_R0002 | - | 17 Phe tRNA
|

415485 | 415560 | - | 76 | 86156430 | Adeh_R0003 | - | 01 Gly tRNA
|

657535 | 657611 | - | 77 | 86156430 | Adeh_R0004 | - | 06 Asp tRNA
|

657618 | 657692 | - | 75 | 86156430 | Adeh_R0005 | - | 13 Val tRNA
|

684121 | 684204 | - | 84 | 86156430 | Adeh_R0006 | - | 15 Leu tRNA
|

837154 | 837226 | + | 73 | 86156430 | Adeh_R0007 | - | 16 Met tRNA
|

1026365 | 1026440 | - | 76 | 86156430 | Adeh_R0008 | - | 02 Ala tRNA
|

1196871 | 1196944 | - | 74 | 86156430 | Adeh_R0009 | - | 03 Pro tRNA
|

1331625 | 1331696 | + | 72 | 86156430 | Adeh_R0010 | - | 19 Cys tRNA
|

1361322 | 1362863 | + | 1542 | 86156430 | Adeh_R0011 | - | 16S ribosomal RNA |

1363057 | 1363134 | + | 78 | 86156430 | Adeh_R0012 | - | 14 Ile tRNA
|

1363154 | 1363229 | + | 76 | 86156430 | Adeh_R0013 | - | 02 Ala tRNA
|

1363429 | 1366413 | + | 2985 | 86156430 | Adeh_R0014 | - | 23S ribosomal RNA |

1366555 | 1366671 | + | 117 | 86156430 | Adeh_R0015 | - | 5S ribosomal RNA |

1406598 | 1406673 | - | 76 | 86156430 | Adeh_R0016 | - | 07 Asn tRNA
|

1684596 | 1684672 | + | 77 | 86156430 | Adeh_R0017 | - | 11 Arg tRNA
|

1758984 | 1759065 | - | 82 | 86156430 | Adeh_R0018 | - | 15 Leu tRNA
|

1786250 | 1786333 | - | 84 | 86156430 | Adeh_R0019 | - | 15 Leu tRNA
|

1813945 | 1814017 | + | 73 | 86156430 | Adeh_R0020 | - | 12 Thr tRNA
|

1814064 | 1814146 | + | 83 | 86156430 | Adeh_R0021 | - | 18 Tyr tRNA
|

1814211 | 1814286 | + | 76 | 86156430 | Adeh_R0022 | - | 01 Gly tRNA
|

1814309 | 1814381 | + | 73 | 86156430 | Adeh_R0023 | - | 12 Thr tRNA
|

1815825 | 1815900 | + | 76 | 86156430 | Adeh_R0024 | - | 20 Trp tRNA
|

1996880 | 1996955 | + | 76 | 86156430 | Adeh_R0025 | - | 12 Thr tRNA
|

2058807 | 2058878 | - | 72 | 86156430 | Adeh_R0026 | - | 13 Val tRNA
|

2097560 | 2097633 | + | 74 | 86156430 | Adeh_R0027 | - | 16 Met tRNA
|

2130853 | 2130947 | + | 95 | 86156430 | Adeh_R0028 | - | Sec tRNA |

2222961 | 2223032 | - | 72 | 86156430 | Adeh_R0029 | - | 13 Val tRNA
|

2638334 | 2638410 | - | 77 | 86156430 | Adeh_R0030 | - | 16 Met tRNA
|

2756510 | 2756585 | - | 76 | 86156430 | Adeh_R0031 | - | 02 Ala tRNA
|

2936679 | 2936753 | - | 75 | 86156430 | Adeh_R0032 | - | 04 Glu tRNA
|

2936814 | 2936887 | - | 74 | 86156430 | Adeh_R0033 | - | 05 Gln tRNA
|

2943690 | 2943806 | - | 117 | 86156430 | Adeh_R0034 | - | 5S ribosomal RNA |

2943948 | 2946932 | - | 2985 | 86156430 | Adeh_R0035 | - | 23S ribosomal RNA |

2947132 | 2947207 | - | 76 | 86156430 | Adeh_R0036 | - | 02 Ala tRNA
|

2947227 | 2947304 | - | 78 | 86156430 | Adeh_R0037 | - | 14 Ile tRNA
|

2947498 | 2949039 | - | 1542 | 86156430 | Adeh_R0038 | - | 16S ribosomal RNA |

3011270 | 3011341 | - | 72 | 86156430 | Adeh_R0039 | - | 10 Lys tRNA
|

3023662 | 3023734 | + | 73 | 86156430 | Adeh_R0040 | - | 04 Glu tRNA
|

3115944 | 3116017 | + | 74 | 86156430 | Adeh_R0041 | - | 11 Arg tRNA
|

3759848 | 3759921 | - | 74 | 86156430 | Adeh_R0042 | - | 03 Pro tRNA
|

3772910 | 3772997 | + | 88 | 86156430 | Adeh_R0043 | - | 15 Leu tRNA
|

3863438 | 3863519 | - | 82 | 86156430 | Adeh_R0044 | - | 15 Leu tRNA
|

3867975 | 3868047 | - | 73 | 86156430 | Adeh_R0045 | - | 10 Lys tRNA
|

3868163 | 3868236 | - | 74 | 86156430 | Adeh_R0046 | - | 11 Arg tRNA
|

3868263 | 3868337 | - | 75 | 86156430 | Adeh_R0047 | - | 09 His tRNA
|

3868356 | 3868429 | - | 74 | 86156430 | Adeh_R0048 | - | 11 Arg tRNA
|

3868471 | 3868544 | - | 74 | 86156430 | Adeh_R0049 | - | 03 Pro tRNA
|

3980145 | 3980357 | + | 213 | 86156430 | Adeh_R0050 | - | |

4088991 | 4089065 | - | 75 | 86156430 | Adeh_R0051 | - | 01 Gly tRNA
|

4138082 | 4138201 | - | 120 | 86156430 | Adeh_R0052 | - | RNA component of RNaseP |

4166364 | 4166475 | - | 112 | 86156430 | Adeh_R0053 | - | SRP RNA; RNA component of signal recognition particle |

4166537 | 4166626 | - | 90 | 86156430 | Adeh_R0054 | - | 08 Ser tRNA
|

4166905 | 4166995 | - | 91 | 86156430 | Adeh_R0055 | - | 08 Ser tRNA
|

4428761 | 4428850 | + | 90 | 86156430 | Adeh_R0056 | - | 08 Ser tRNA
|

4428878 | 4428969 | + | 92 | 86156430 | Adeh_R0057 | - | 08 Ser tRNA
|

4429043 | 4429119 | + | 77 | 86156430 | Adeh_R0058 | - | 11 Arg tRNA
|