Материалы:NC 004603

LOCUS NC_004603 3288558 bp DNA circular BCT 02-DEC-2005 DEFINITION Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete sequence. ACCESSION NC_004603 VERSION NC_004603.1 GI:28896774 KEYWORDS . SOURCE Vibrio parahaemolyticus RIMD 2210633 ORGANISM Vibrio parahaemolyticus RIMD 2210633 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 AUTHORS Makino,K., Oshima,K., Kurokawa,K., Yokoyama,K., Uda,T., Tagomori,K., Iijima,Y., Najima,M., Nakano,M., Yamashita,A., Kubota,Y., Kimura,S., Yasunaga,T., Honda,T., Shinagawa,H., Hattori,M. and Iida,T. TITLE Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae JOURNAL Lancet 361 (9359), 743-749 (2003) PUBMED 12620739 REFERENCE 2 AUTHORS Nasu,H., Iida,T., Sugahara,T., Yamaichi,Y., Park,K.S., Yokoyama,K., Makino,K., Shinagawa,H. and Honda,T. TITLE A filamentous phage associated with recent pandemic Vibrio parahaemolyticus O3:K6 strains JOURNAL J. Clin. Microbiol. 38 (6), 2156-2161 (2000) PUBMED 10834969 REFERENCE 3 (bases 1 to 3288558) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (10-MAR-2003) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 4 (bases 1 to 3288558) AUTHORS Oshima,K., Kurokawa,K., Makino,K., Yokoyama,K., Yasunaga,T., Honda,T., Shinagawa,H., Hattori,M. and Iida,T. TITLE Direct Submission JOURNAL Submitted (09-APR-2002) Ken Kurokawa, Osaka University, Genome Information Research Center; 3-1, Yamadaoka, Suita, Osaka 565-0871, Japan (E-mail:ken@gen-info.osaka-u.ac.jp, URL:http://www.gen-info.osaka-u.ac.jp/, Tel:81-6-6879-8365, Fax:81-6-6879-2047) COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BA000031. COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

33633 | 35103 | + | 1471 | 28896774 | VPr001 | - | 16S ribosomal RNA |

35273 | 35348 | + | 76 | 28896774 | VPt001 | - | 04 Glu tRNA
|

35351 | 35426 | + | 76 | 28896774 | VPt002 | - | 10 Lys tRNA
|

35457 | 35532 | + | 76 | 28896774 | VPt003 | - | 13 Val tRNA
|

35852 | 38742 | + | 2891 | 28896774 | VPr002 | - | 23S ribosomal RNA |

38832 | 38951 | + | 120 | 28896774 | VPr003 | - | 5S ribosomal RNA |

50014 | 50090 | + | 77 | 28896774 | VPt004 | - | 11 Arg tRNA
|

50123 | 50198 | + | 76 | 28896774 | VPt005 | - | 09 His tRNA
|

50271 | 50347 | + | 77 | 28896774 | VPt006 | - | 03 Pro tRNA
|

50397 | 50472 | + | 76 | 28896774 | VPt007 | - | 09 His tRNA
|

50497 | 50573 | + | 77 | 28896774 | VPt008 | - | 03 Pro tRNA
|

403769 | 403844 | - | 76 | 28896774 | VPt009 | - | 16 Met tRNA
|

581626 | 583096 | + | 1471 | 28896774 | VPr004 | - | 16S ribosomal RNA |

583274 | 583349 | + | 76 | 28896774 | VPt010 | - | 02 Ala tRNA
|

583362 | 583437 | + | 76 | 28896774 | VPt011 | - | 04 Glu tRNA
|

583703 | 586593 | + | 2891 | 28896774 | VPr005 | - | 23S ribosomal RNA |

586683 | 586802 | + | 120 | 28896774 | VPr006 | - | 5S ribosomal RNA |

586831 | 586907 | + | 77 | 28896774 | VPt012 | - | 06 Asp tRNA
|

586943 | 587019 | + | 77 | 28896774 | VPt013 | - | 20 Trp tRNA
|

771968 | 772052 | - | 85 | 28896774 | VPt014 | - | 15 Leu tRNA
|

772106 | 772180 | - | 75 | 28896774 | VPt015 | - | 05 Gln tRNA
|

772228 | 772312 | - | 85 | 28896774 | VPt016 | - | 15 Leu tRNA
|

772342 | 772426 | - | 85 | 28896774 | VPt017 | - | 15 Leu tRNA
|

772474 | 772550 | - | 77 | 28896774 | VPt018 | - | 16 Met tRNA
|

772575 | 772659 | - | 85 | 28896774 | VPt019 | - | 15 Leu tRNA
|

772712 | 772786 | - | 75 | 28896774 | VPt020 | - | 05 Gln tRNA
|

772816 | 772900 | - | 85 | 28896774 | VPt021 | - | 15 Leu tRNA
|

772954 | 773030 | - | 77 | 28896774 | VPt022 | - | 16 Met tRNA
|

773055 | 773139 | - | 85 | 28896774 | VPt023 | - | 15 Leu tRNA
|

773192 | 773266 | - | 75 | 28896774 | VPt024 | - | 05 Gln tRNA
|

773296 | 773380 | - | 85 | 28896774 | VPt025 | - | 15 Leu tRNA
|

773435 | 773509 | - | 75 | 28896774 | VPt026 | - | 05 Gln tRNA
|

773539 | 773623 | - | 85 | 28896774 | VPt027 | - | 15 Leu tRNA
|

773659 | 773733 | - | 75 | 28896774 | VPt028 | - | 05 Gln tRNA
|

773782 | 773866 | - | 85 | 28896774 | VPt029 | - | 15 Leu tRNA
|

773897 | 773981 | - | 85 | 28896774 | VPt030 | - | 15 Leu tRNA
|

774059 | 774135 | - | 77 | 28896774 | VPt031 | - | 16 Met tRNA
|

774213 | 774287 | - | 75 | 28896774 | VPt032 | - | 05 Gln tRNA
|

774442 | 774518 | - | 77 | 28896774 | VPt033 | - | 16 Met tRNA
|

789515 | 789591 | + | 77 | 28896774 | VPt034 | - | 03 Pro tRNA
|

804917 | 804993 | - | 77 | 28896774 | VPt035 | - | 11 Arg tRNA
|

912549 | 912625 | + | 77 | 28896774 | VPt036 | - | 11 Arg tRNA
|

978106 | 978190 | - | 85 | 28896774 | VPt037 | - | 18 Tyr tRNA
|

978272 | 978356 | - | 85 | 28896774 | VPt038 | - | 18 Tyr tRNA
|

978438 | 978522 | - | 85 | 28896774 | VPt039 | - | 18 Tyr tRNA
|

978604 | 978688 | - | 85 | 28896774 | VPt040 | - | 18 Tyr tRNA
|

978770 | 978854 | - | 85 | 28896774 | VPt041 | - | 18 Tyr tRNA
|

978936 | 979020 | - | 85 | 28896774 | VPt042 | - | 18 Tyr tRNA
|

1121082 | 1121169 | + | 88 | 28896774 | VPt043 | - | 08 Ser tRNA
|

1437460 | 1437536 | + | 77 | 28896774 | VPt044 | - | 13 Val tRNA
|

1437569 | 1437645 | + | 77 | 28896774 | VPt045 | - | 13 Val tRNA
|

2034204 | 2034279 | - | 76 | 28896774 | VPt046 | - | 01 Gly tRNA
|

2034290 | 2034376 | - | 87 | 28896774 | VPt047 | - | 15 Leu tRNA
|

2034453 | 2034528 | - | 76 | 28896774 | VPt048 | - | 01 Gly tRNA
|

2034566 | 2034639 | - | 74 | 28896774 | VPt049 | - | 19 Cys tRNA
|

2210208 | 2210283 | + | 76 | 28896774 | VPt050 | - | 07 Asn tRNA
|

2239837 | 2239927 | + | 91 | 28896774 | VPt051 | - | 08 Ser tRNA
|

2582455 | 2582531 | - | 77 | 28896774 | VPt052 | - | 16 Met tRNA
|

2582588 | 2582671 | - | 84 | 28896774 | VPt053 | - | 15 Leu tRNA
|

2686780 | 2686856 | - | 77 | 28896774 | VPt054 | - | 11 Arg tRNA
|

2686914 | 2686990 | - | 77 | 28896774 | VPt055 | - | 11 Arg tRNA
|

2687048 | 2687124 | - | 77 | 28896774 | VPt056 | - | 11 Arg tRNA
|

2687182 | 2687258 | - | 77 | 28896774 | VPt057 | - | 11 Arg tRNA
|

2687316 | 2687392 | - | 77 | 28896774 | VPt058 | - | 11 Arg tRNA
|

2687450 | 2687526 | - | 77 | 28896774 | VPt059 | - | 11 Arg tRNA
|

2687583 | 2687659 | - | 77 | 28896774 | VPt060 | - | 11 Arg tRNA
|

2687870 | 2687946 | - | 77 | 28896774 | VPt061 | - | 11 Arg tRNA
|

2687978 | 2688069 | - | 92 | 28896774 | VPt062 | - | 08 Ser tRNA
|

2770086 | 2770161 | + | 76 | 28896774 | VPt063 | - | 17 Phe tRNA
|

2770227 | 2770302 | + | 76 | 28896774 | VPt064 | - | 12 Thr tRNA
|

2770310 | 2770385 | + | 76 | 28896774 | VPt065 | - | 17 Phe tRNA
|

2770456 | 2770531 | + | 76 | 28896774 | VPt066 | - | 07 Asn tRNA
|

2770603 | 2770678 | + | 76 | 28896774 | VPt067 | - | 12 Thr tRNA
|

2770686 | 2770761 | + | 76 | 28896774 | VPt068 | - | 17 Phe tRNA
|

2770805 | 2770880 | + | 76 | 28896774 | VPt069 | - | 07 Asn tRNA
|

2773013 | 2773088 | + | 76 | 28896774 | VPt070 | - | 17 Phe tRNA
|

2773140 | 2773215 | + | 76 | 28896774 | VPt071 | - | 12 Thr tRNA
|

2773237 | 2773312 | + | 76 | 28896774 | VPt072 | - | 07 Asn tRNA
|

2773352 | 2773427 | + | 76 | 28896774 | VPt073 | - | 12 Thr tRNA
|

2773443 | 2773518 | + | 76 | 28896774 | VPt074 | - | 07 Asn tRNA
|

2775658 | 2775734 | - | 77 | 28896774 | VPt075 | - | 06 Asp tRNA
|

2775764 | 2775884 | - | 121 | 28896774 | VPr007 | - | 5S ribosomal RNA |

2775940 | 2776015 | - | 76 | 28896774 | VPt076 | - | 12 Thr tRNA
|

2776114 | 2776233 | - | 120 | 28896774 | VPr008 | - | 5S ribosomal RNA |

2776323 | 2779213 | - | 2891 | 28896774 | VPr009 | - | 23S ribosomal RNA |

2779478 | 2779553 | - | 76 | 28896774 | VPt077 | - | 02 Ala tRNA
|

2779595 | 2779671 | - | 77 | 28896774 | VPt078 | - | 14 Ile tRNA
|

2779817 | 2781287 | - | 1471 | 28896774 | VPr010 | - | 16S ribosomal RNA |

2790320 | 2790404 | - | 85 | 28896774 | VPt079 | - | 15 Leu tRNA
|

2881915 | 2881991 | - | 77 | 28896774 | VPt080 | - | 06 Asp tRNA
|

2882020 | 2882139 | - | 120 | 28896774 | VPr011 | - | 5S ribosomal RNA |

2882229 | 2885119 | - | 2891 | 28896774 | VPr012 | - | 23S ribosomal RNA |

2885385 | 2885460 | - | 76 | 28896774 | VPt081 | - | 04 Glu tRNA
|

2885630 | 2887100 | - | 1471 | 28896774 | VPr013 | - | 16S ribosomal RNA |

2988610 | 2988686 | - | 77 | 28896774 | VPt082 | - | 16 Met tRNA
|

2988743 | 2988818 | - | 76 | 28896774 | VPt083 | - | 01 Gly tRNA
|

2988837 | 2988913 | - | 77 | 28896774 | VPt084 | - | 16 Met tRNA
|

2988949 | 2989024 | - | 76 | 28896774 | VPt085 | - | 01 Gly tRNA
|

2989075 | 2989150 | - | 76 | 28896774 | VPt086 | - | 01 Gly tRNA
|

2989200 | 2989275 | - | 76 | 28896774 | VPt087 | - | 01 Gly tRNA
|

2989325 | 2989400 | - | 76 | 28896774 | VPt088 | - | 01 Gly tRNA
|

2989431 | 2989507 | - | 77 | 28896774 | VPt089 | - | 16 Met tRNA
|

2989563 | 2989638 | - | 76 | 28896774 | VPt090 | - | 01 Gly tRNA
|

2989669 | 2989745 | - | 77 | 28896774 | VPt091 | - | 16 Met tRNA
|

2989785 | 2989860 | - | 76 | 28896774 | VPt092 | - | 01 Gly tRNA
|

2989880 | 2989956 | - | 77 | 28896774 | VPt093 | - | 16 Met tRNA
|

2989992 | 2990067 | - | 76 | 28896774 | VPt094 | - | 01 Gly tRNA
|

3062167 | 3062243 | - | 77 | 28896774 | VPt095 | - | 20 Trp tRNA
|

3062312 | 3062388 | - | 77 | 28896774 | VPt096 | - | 06 Asp tRNA
|

3062417 | 3062536 | - | 120 | 28896774 | VPr014 | - | 5S ribosomal RNA |

3062626 | 3065516 | - | 2891 | 28896774 | VPr015 | - | 23S ribosomal RNA |

3065781 | 3065856 | - | 76 | 28896774 | VPt097 | - | 13 Val tRNA
|

3065871 | 3065946 | - | 76 | 28896774 | VPt098 | - | 02 Ala tRNA
|

3065979 | 3066054 | - | 76 | 28896774 | VPt099 | - | 10 Lys tRNA
|

3066057 | 3066132 | - | 76 | 28896774 | VPt100 | - | 04 Glu tRNA
|

3066302 | 3067772 | - | 1471 | 28896774 | VPr016 | - | 16S ribosomal RNA |

3068091 | 3068210 | - | 120 | 28896774 | VPr017 | - | 5S ribosomal RNA |

3068300 | 3071190 | - | 2891 | 28896774 | VPr018 | - | 23S ribosomal RNA |

3071548 | 3073018 | - | 1471 | 28896774 | VPr019 | - | 16S ribosomal RNA |

3122180 | 3122255 | - | 76 | 28896774 | VPt101 | - | 12 Thr tRNA
|

3122269 | 3122343 | - | 75 | 28896774 | VPt102 | - | 01 Gly tRNA
|

3122379 | 3122463 | - | 85 | 28896774 | VPt103 | - | 18 Tyr tRNA
|

3122500 | 3122575 | - | 76 | 28896774 | VPt104 | - | 12 Thr tRNA
|

3128159 | 3128235 | - | 77 | 28896774 | VPt105 | - | 06 Asp tRNA
|

3128264 | 3128383 | - | 120 | 28896774 | VPr020 | - | 5S ribosomal RNA |

3128473 | 3131363 | - | 2891 | 28896774 | VPr021 | - | 23S ribosomal RNA |

3131721 | 3133191 | - | 1471 | 28896774 | VPr022 | - | 16S ribosomal RNA |

3133510 | 3133629 | - | 120 | 28896774 | VPr023 | - | 5S ribosomal RNA |

3133719 | 3136609 | - | 2891 | 28896774 | VPr024 | - | 23S ribosomal RNA |

3136967 | 3138437 | - | 1471 | 28896774 | VPr025 | - | 16S ribosomal RNA |

3193080 | 3193170 | - | 91 | 28896774 | VPt106 | - | 08 Ser tRNA
|

3193238 | 3193357 | - | 120 | 28896774 | VPr026 | - | 5S ribosomal RNA |

3193447 | 3196340 | - | 2894 | 28896774 | VPr027 | - | 23S ribosomal RNA |

3196605 | 3196680 | - | 76 | 28896774 | VPt107 | - | 02 Ala tRNA
|

3196722 | 3196798 | - | 77 | 28896774 | VPt108 | - | 14 Ile tRNA
|

3196944 | 3198414 | - | 1471 | 28896774 | VPr028 | - | 16S ribosomal RNA |

3234328 | 3234404 | - | 77 | 28896774 | VPt109 | - | 06 Asp tRNA
|

3234433 | 3234552 | - | 120 | 28896774 | VPr029 | - | 5S ribosomal RNA |

3234642 | 3237532 | - | 2891 | 28896774 | VPr030 | - | 23S ribosomal RNA |

3237852 | 3237927 | - | 76 | 28896774 | VPt110 | - | 13 Val tRNA
|

3237958 | 3238033 | - | 76 | 28896774 | VPt111 | - | 10 Lys tRNA
|

3238036 | 3238111 | - | 76 | 28896774 | VPt112 | - | 04 Glu tRNA
|

3238281 | 3239751 | - | 1471 | 28896774 | VPr031 | - | 16S ribosomal RNA |