Материалы:NC 008578

LOCUS NC_008578 2443540 bp DNA circular BCT 22-NOV-2006 DEFINITION Acidothermus cellulolyticus 11B, complete genome. ACCESSION NC_008578 VERSION NC_008578.1 GI:117927211 KEYWORDS . SOURCE Acidothermus cellulolyticus 11B ORGANISM Acidothermus cellulolyticus 11B Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Frankineae; Acidothermaceae; Acidothermus. REFERENCE 1 (bases 1 to 2443540) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Zharchuk,I., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Berry,A.M., Adney,W.S., Normand,P., Leu,D., Pujic,P. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Acidothermus cellulolyticus 11B JOURNAL Unpublished REFERENCE 2 (bases 1 to 2443540) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-NOV-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2443540) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Zharchuk,I., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Berry,A.M., Adney,W.S., Normand,P., Leu,D., Pujic,P. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (27-OCT-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000481. URL -- http://www.jgi.doe.gov JGI Project ID: 4000235 Source DNA and bacteria available from Alison M. Berry (amberry@ucdavis.edu) Contacts: Alison M. Berry (amberry@ucdavis.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

10111 | 10184 | + | 74 | 117927211 | Acel_R0001 | - | 14 Ile tRNA
|

10372 | 10444 | + | 73 | 117927211 | Acel_R0002 | - | 02 Ala tRNA
|

24698 | 24783 | + | 86 | 117927211 | Acel_R0003 | - | 15 Leu tRNA
|

40835 | 40924 | + | 90 | 117927211 | Acel_R0004 | - | 08 Ser tRNA
|

41078 | 41150 | + | 73 | 117927211 | Acel_R0005 | - | 11 Arg tRNA
|

89585 | 89657 | + | 73 | 117927211 | Acel_R0007 | - | 12 Thr tRNA
|

160721 | 160793 | - | 73 | 117927211 | Acel_R0009 | - | 11 Arg tRNA
|

179159 | 179235 | - | 77 | 117927211 | Acel_R0010 | - | 02 Ala tRNA
|

307544 | 307629 | + | 86 | 117927211 | Acel_R0011 | - | 18 Tyr tRNA
|

308349 | 308424 | + | 76 | 117927211 | Acel_R0012 | - | 12 Thr tRNA
|

308433 | 308506 | + | 74 | 117927211 | Acel_R0013 | - | 16 Met tRNA
|

313372 | 313444 | + | 73 | 117927211 | Acel_R0014 | - | 20 Trp tRNA
|

509883 | 509956 | + | 74 | 117927211 | Acel_R0015 | - | 16 Met tRNA
|

677124 | 677195 | - | 72 | 117927211 | Acel_R0016 | - | 11 Arg tRNA
|

783342 | 783416 | + | 75 | 117927211 | Acel_R0017 | - | 05 Gln tRNA
|

783484 | 783559 | + | 76 | 117927211 | Acel_R0018 | - | 04 Glu tRNA
|

842997 | 843069 | + | 73 | 117927211 | Acel_R0019 | - | 02 Ala tRNA
|

893343 | 893418 | + | 76 | 117927211 | Acel_R0020 | - | 07 Asn tRNA
|

895201 | 895275 | + | 75 | 117927211 | Acel_R0021 | - | Xaa tRNA |

921140 | 921213 | + | 74 | 117927211 | Acel_R0022 | - | 16 Met tRNA
|

959541 | 959642 | + | 102 | 117927211 | Acel_R0023 | - | RNA component of RNaseP |

974815 | 974886 | + | 72 | 117927211 | Acel_R0024 | - | 13 Val tRNA
|

999565 | 999748 | + | 184 | 117927211 | Acel_R0025 | - | RNA component of RNaseP |

1069182 | 1069310 | + | 129 | 117927211 | Acel_R0027 | - | |

1195798 | 1195870 | - | 73 | 117927211 | Acel_R0029 | - | 15 Leu tRNA
|

1294229 | 1294313 | - | 85 | 117927211 | Acel_R0030 | - | 15 Leu tRNA
|

1372762 | 1372838 | - | 77 | 117927211 | Acel_R0033 | - | 03 Pro tRNA
|

1394058 | 1394174 | - | 117 | 117927211 | Acel_R0034 | - | 5S ribosomal RNA |

1394248 | 1397363 | - | 3116 | 117927211 | Acel_R0035 | - | 23S ribosomal RNA |

1397655 | 1399163 | - | 1509 | 117927211 | Acel_R0036 | - | 16S ribosomal RNA |

1523649 | 1523720 | - | 72 | 117927211 | Acel_R0038 | - | 13 Val tRNA
|

1524762 | 1524834 | + | 73 | 117927211 | Acel_R0039 | - | 01 Gly tRNA
|

1524883 | 1524954 | + | 72 | 117927211 | Acel_R0040 | - | 19 Cys tRNA
|

1525000 | 1525074 | + | 75 | 117927211 | Acel_R0041 | - | 13 Val tRNA
|

1796880 | 1796952 | - | 73 | 117927211 | Acel_R0042 | - | 03 Pro tRNA
|

1797034 | 1797104 | + | 71 | 117927211 | Acel_R0043 | - | 01 Gly tRNA
|

1824619 | 1824691 | + | 73 | 117927211 | Acel_R0044 | - | 11 Arg tRNA
|

1855719 | 1855794 | + | 76 | 117927211 | Acel_R0045 | - | 09 His tRNA
|

1861376 | 1861448 | + | 73 | 117927211 | Acel_R0046 | - | 10 Lys tRNA
|

1894564 | 1894636 | + | 73 | 117927211 | Acel_R0047 | - | 15 Leu tRNA
|

1948386 | 1948761 | - | 376 | 117927211 | Acel_R0050 | - | tmRNA |

2147460 | 2147532 | - | 73 | 117927211 | Acel_R0053 | - | 15 Leu tRNA
|

2206752 | 2206822 | - | 71 | 117927211 | Acel_R0054 | - | 05 Gln tRNA
|

2229255 | 2229359 | + | 105 | 117927211 | Acel_R0055 | - | |

2230555 | 2230630 | - | 76 | 117927211 | Acel_R0056 | - | 12 Thr tRNA
|

2281581 | 2281657 | - | 77 | 117927211 | Acel_R0057 | - | 03 Pro tRNA
|

2292429 | 2292519 | - | 91 | 117927211 | Acel_R0058 | - | SRP RNA; RNA component of signal recognition particle |

2292585 | 2292671 | + | 87 | 117927211 | Acel_R0059 | - | 08 Ser tRNA
|

2293394 | 2293483 | - | 90 | 117927211 | Acel_R0060 | - | 08 Ser tRNA
|

2336246 | 2336318 | - | 73 | 117927211 | Acel_R0061 | - | 10 Lys tRNA
|

2339526 | 2339598 | + | 73 | 117927211 | Acel_R0062 | - | 04 Glu tRNA
|

2339683 | 2339760 | + | 78 | 117927211 | Acel_R0063 | - | 06 Asp tRNA
|

2339803 | 2339879 | + | 77 | 117927211 | Acel_R0064 | - | 17 Phe tRNA
|

2372859 | 2373007 | - | 149 | 117927211 | Acel_R0065 | - | |

2374948 | 2375032 | + | 85 | 117927211 | Acel_R0066 | - | 08 Ser tRNA
|

2389254 | 2389324 | - | 71 | 117927211 | Acel_R0067 | - | 01 Gly tRNA
|