Материалы:NC 008531

LOCUS NC_008531 2038396 bp DNA circular BCT 31-OCT-2006 DEFINITION Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293, complete genome. ACCESSION NC_008531 VERSION NC_008531.1 GI:116617174 KEYWORDS . SOURCE Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 ORGANISM Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Bacteria; Firmicutes; Lactobacillales; Leuconostoc. REFERENCE 1 (bases 1 to 2038396) AUTHORS Makarova,K., Slesarev,A., Wolf,Y., Sorokin,A., Mirkin,B., Koonin,E., Pavolv,A., Pavlova,N., Karamychev,V., Polouchine,N., Shakhova,V., Grigoriev,I., Lou,Y., Rohksar,D., Lucas,S., Huang,K., Goldstein,D.M., Hawkins,T., Plengvidhya,V., Welker,D., Hughes,J., Goh,Y., Benson,A., Baldwin,K., Lee,J.-H., Diaz-Muniz,I., Dosti,B., Smeianov,V., Wechter,W., Barabote,R., Lorca,G., Altermann,E., Barrangou,R., Ganesan,B., Xie,Y., Rawsthorne,H., Tamir,D., Parker,C., Breidt,F., Broadbent,J., Hutkins,R., O'Sulllivan,D., Steele,J., Unlu,G., Saier,M., Klaenhammer,T., Richardson,P., Kozyavkin,S., Weimer,B. and Mills,D. TITLE Comparative genomics of the lactic acid bacteria JOURNAL Proc. Natl. Acad. Sci. U.S.A. 103 (42), 15611-15616 (2006) PUBMED 17030793 REFERENCE 2 (bases 1 to 2038396) AUTHORS . CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-OCT-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2038396) AUTHORS Lucas,S., Copeland,A., Detter,J.C., Glavina del Rio,T., Pitluck,S., Grigoriev,I., Rokhsar,D., Slesarev,A., Pavlov,A., Pavlova,N., Karamychev,V., Polouchine,N., Shakhova,V., Kozyavkin,S., Makarova,K., Koonin,E., Mills,D.A. and Richardson,P. CONSRTM US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc. TITLE Direct Submission JOURNAL Submitted (22-MAY-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000414. URL -- http://www.jgi.doe.gov JGI Project ID: 2662187 Source DNA and bacteria available from Fred Breidt (breidt@ncsu.edu) Bacteria also available from ATCC: ATCC 8293 Contacts: Fred Breidt (breidt@ncsu.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Annotation done by Kira Makarova and Eugene Koonin Finishing done by Fidelity Systems Inc. (Gaithersburg) URL -- http://www.fidelitysystems.com Project Information available at: http://genome.jgi-psf.org/mic_home.html The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

22669 | 24217 | + | 1549 | 116617174 | LEUM_r0019 | - | 16S ribosomal RNA |

24330 | 24402 | + | 73 | 116617174 | LEUM_t0020 | - | 02 Ala tRNA
|

24593 | 27506 | + | 2914 | 116617174 | LEUM_r0021 | - | 23S ribosomal RNA |

27624 | 27712 | + | 89 | 116617174 | LEUM_r0022 | - | 5S ribosomal RNA |

27762 | 27855 | + | 94 | 116617174 | LEUM_t0023 | - | 08 Ser tRNA
|

27857 | 27929 | + | 73 | 116617174 | LEUM_t0024 | - | 13 Val tRNA
|

27970 | 28042 | + | 73 | 116617174 | LEUM_t0025 | - | 12 Thr tRNA
|

28051 | 28122 | + | 72 | 116617174 | LEUM_t0026 | - | 01 Gly tRNA
|

28128 | 28211 | + | 84 | 116617174 | LEUM_t0027 | - | 15 Leu tRNA
|

28217 | 28290 | + | 74 | 116617174 | LEUM_t0028 | - | 11 Arg tRNA
|

28359 | 28432 | + | 74 | 116617174 | LEUM_t0029 | - | 03 Pro tRNA
|

28461 | 28534 | + | 74 | 116617174 | LEUM_t0030 | - | 16 Met tRNA
|

28548 | 28621 | + | 74 | 116617174 | LEUM_t0031 | - | 16 Met tRNA
|

28646 | 28735 | + | 90 | 116617174 | LEUM_t0032 | - | 08 Ser tRNA
|

28767 | 28840 | + | 74 | 116617174 | LEUM_t0033 | - | 16 Met tRNA
|

28843 | 28916 | + | 74 | 116617174 | LEUM_t0034 | - | 06 Asp tRNA
|

28937 | 29009 | + | 73 | 116617174 | LEUM_t0035 | - | 17 Phe tRNA
|

29037 | 29107 | + | 71 | 116617174 | LEUM_t0036 | - | 01 Gly tRNA
|

29140 | 29213 | + | 74 | 116617174 | LEUM_t0037 | - | 14 Ile tRNA
|

47149 | 47220 | - | 72 | 116617174 | LEUM_t0056 | - | 07 Asn tRNA
|

114832 | 114907 | - | 76 | 116617174 | LEUM_t0132 | - | 10 Lys tRNA
|

148404 | 149952 | + | 1549 | 116617174 | LEUM_r0163 | - | 16S ribosomal RNA |

150065 | 150137 | + | 73 | 116617174 | LEUM_t0164 | - | 02 Ala tRNA
|

150328 | 153241 | + | 2914 | 116617174 | LEUM_r0165 | - | 23S ribosomal RNA |

153359 | 153447 | + | 89 | 116617174 | LEUM_r0166 | - | 5S ribosomal RNA |

153497 | 153590 | + | 94 | 116617174 | LEUM_t0167 | - | 08 Ser tRNA
|

153592 | 153664 | + | 73 | 116617174 | LEUM_t0168 | - | 13 Val tRNA
|

153705 | 153777 | + | 73 | 116617174 | LEUM_t0169 | - | 12 Thr tRNA
|

153786 | 153857 | + | 72 | 116617174 | LEUM_t0170 | - | 01 Gly tRNA
|

153863 | 153946 | + | 84 | 116617174 | LEUM_t0171 | - | 15 Leu tRNA
|

153952 | 154025 | + | 74 | 116617174 | LEUM_t0172 | - | 11 Arg tRNA
|

154094 | 154167 | + | 74 | 116617174 | LEUM_t0173 | - | 03 Pro tRNA
|

154196 | 154269 | + | 74 | 116617174 | LEUM_t0174 | - | 16 Met tRNA
|

154283 | 154356 | + | 74 | 116617174 | LEUM_t0175 | - | 16 Met tRNA
|

154381 | 154470 | + | 90 | 116617174 | LEUM_t0176 | - | 08 Ser tRNA
|

154502 | 154575 | + | 74 | 116617174 | LEUM_t0177 | - | 16 Met tRNA
|

154578 | 154651 | + | 74 | 116617174 | LEUM_t0178 | - | 06 Asp tRNA
|

154672 | 154744 | + | 73 | 116617174 | LEUM_t0179 | - | 17 Phe tRNA
|

154772 | 154842 | + | 71 | 116617174 | LEUM_t0180 | - | 01 Gly tRNA
|

154875 | 154948 | + | 74 | 116617174 | LEUM_t0181 | - | 14 Ile tRNA
|

197140 | 197222 | + | 83 | 116617174 | LEUM_t0235 | - | 18 Tyr tRNA
|

197260 | 197334 | + | 75 | 116617174 | LEUM_t0236 | - | 05 Gln tRNA
|

197424 | 197511 | - | 88 | 116617174 | LEUM_t0237 | - | 15 Leu tRNA
|

205620 | 205691 | - | 72 | 116617174 | LEUM_t0245 | - | Xaa tRNA |

247526 | 247601 | + | 76 | 116617174 | LEUM_t0291 | - | 10 Lys tRNA
|

273252 | 273609 | + | 358 | 116617174 | LEUM_s0320 | - | tmRNA |

297748 | 297834 | + | 87 | 116617174 | LEUM_t0342 | - | 15 Leu tRNA
|

318416 | 318487 | + | 72 | 116617174 | LEUM_t0365 | - | 04 Glu tRNA
|

367415 | 367487 | + | 73 | 116617174 | LEUM_t0407 | - | 07 Asn tRNA
|

367594 | 367666 | + | 73 | 116617174 | LEUM_t0408 | - | 07 Asn tRNA
|

367671 | 367746 | + | 76 | 116617174 | LEUM_t0409 | - | 12 Thr tRNA
|

370545 | 370616 | - | 72 | 116617174 | LEUM_t0413 | - | 04 Glu tRNA
|

381019 | 381090 | - | 72 | 116617174 | LEUM_t0423 | - | 05 Gln tRNA
|

477234 | 477307 | + | 74 | 116617174 | LEUM_t0514 | - | 10 Lys tRNA
|

500070 | 500140 | + | 71 | 116617174 | LEUM_t0535 | - | 19 Cys tRNA
|

589604 | 589679 | - | 76 | 116617174 | LEUM_t0622 | - | 11 Arg tRNA
|

621520 | 621853 | + | 334 | 116617174 | LEUM_s0654 | - | RNA_RNaseP_classB |

626478 | 626552 | + | 75 | 116617174 | LEUM_t0659 | - | 04 Glu tRNA
|

722634 | 722707 | + | 74 | 116617174 | LEUM_t0744 | - | 16 Met tRNA
|

1311944 | 1312018 | + | 75 | 116617174 | LEUM_t1320 | - | 04 Glu tRNA
|

1319646 | 1319719 | - | 74 | 116617174 | LEUM_t1333 | - | 11 Arg tRNA
|

1325872 | 1325960 | - | 89 | 116617174 | LEUM_t1341 | - | 08 Ser tRNA
|

1461108 | 1461191 | + | 84 | 116617174 | LEUM_t1465 | - | 15 Leu tRNA
|

1666982 | 1667053 | - | 72 | 116617174 | LEUM_t1693 | - | 07 Asn tRNA
|

1677110 | 1677198 | - | 89 | 116617174 | LEUM_r1705 | - | 5S ribosomal RNA |

1677316 | 1680229 | - | 2914 | 116617174 | LEUM_r1706 | - | 23S ribosomal RNA |

1680420 | 1680492 | - | 73 | 116617174 | LEUM_t1707 | - | 02 Ala tRNA
|

1680605 | 1682153 | - | 1549 | 116617174 | LEUM_r1708 | - | 16S ribosomal RNA |

1801982 | 1802065 | - | 84 | 116617174 | LEUM_t1826 | - | 15 Leu tRNA
|

1802089 | 1802164 | - | 76 | 116617174 | LEUM_t1827 | - | 09 His tRNA
|

1802167 | 1802240 | - | 74 | 116617174 | LEUM_t1828 | - | 20 Trp tRNA
|

1802336 | 1802412 | - | 77 | 116617174 | LEUM_t1829 | - | 06 Asp tRNA
|

1802415 | 1802487 | - | 73 | 116617174 | LEUM_t1830 | - | 13 Val tRNA
|

1802489 | 1802582 | - | 94 | 116617174 | LEUM_t1831 | - | 08 Ser tRNA
|

1802632 | 1802720 | - | 89 | 116617174 | LEUM_r1832 | - | 5S ribosomal RNA |

1802838 | 1805751 | - | 2914 | 116617174 | LEUM_r1833 | - | 23S ribosomal RNA |

1805942 | 1806014 | - | 73 | 116617174 | LEUM_t1834 | - | 02 Ala tRNA
|

1806127 | 1807675 | - | 1549 | 116617174 | LEUM_r1835 | - | 16S ribosomal RNA |

1834566 | 1834638 | - | 73 | 116617174 | LEUM_t1858 | - | 12 Thr tRNA
|

1834714 | 1834795 | - | 82 | 116617174 | LEUM_t1859 | - | 15 Leu tRNA
|

1839615 | 1839689 | - | 75 | 116617174 | LEUM_t1865 | - | 04 Glu tRNA
|

1882699 | 1882786 | - | 88 | 116617174 | LEUM_t1914 | - | 08 Ser tRNA
|

1893697 | 1893771 | - | 75 | 116617174 | LEUM_t1924 | - | 05 Gln tRNA
|

1893809 | 1893891 | - | 83 | 116617174 | LEUM_t1925 | - | 18 Tyr tRNA
|

2022929 | 2022999 | + | 71 | 116617174 | LEUM_t2056 | - | 14 Ile tRNA
|