Материалы:NC 007516

LOCUS NC_007516 2510659 bp DNA circular BCT 16-JUN-2006 DEFINITION Synechococcus sp. CC9605, complete genome. ACCESSION NC_007516 VERSION NC_007516.1 GI:78211558 KEYWORDS . SOURCE Synechococcus sp. CC9605 ORGANISM Synechococcus sp. CC9605 Bacteria; Cyanobacteria; Chroococcales; Synechococcus. REFERENCE 1 (bases 1 to 2510659) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Schmutz,J., Martinez,M., Larimer,F., Land,M., Kyrpides,N., Ivanova,N. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Synechococcus sp. CC9605 JOURNAL Unpublished REFERENCE 2 (bases 1 to 2510659) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (28-OCT-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2510659) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Schmutz,J., Martinez,M., Larimer,F., Land,M., Ivanova,N. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (27-JUL-2005) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000110. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Brian Palenik (bpalenik@ucsd.edu) Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

40886 | 40957 | - | 72 | 78211558 | Syncc9605_R0001 | - | 01 Gly tRNA
|

81036 | 81107 | + | 72 | 78211558 | Syncc9605_R0002 | - | 01 Gly tRNA
|

151785 | 152114 | - | 330 | 78211558 | Syncc9605_R0003 | - | RNA component of RNaseP |

152198 | 152271 | + | 74 | 78211558 | Syncc9605_R0004 | - | 11 Arg tRNA
|

240013 | 240085 | + | 73 | 78211558 | Syncc9605_R0005 | - | Xaa tRNA |

259938 | 260011 | + | 74 | 78211558 | Syncc9605_R0006 | - | 11 Arg tRNA
|

292703 | 292784 | + | 82 | 78211558 | Syncc9605_R0007 | - | 15 Leu tRNA
|

300106 | 300178 | - | 73 | 78211558 | Syncc9605_R0008 | - | 02 Ala tRNA
|

336548 | 336621 | + | 74 | 78211558 | Syncc9605_R0009 | - | 03 Pro tRNA
|

354910 | 354998 | - | 89 | 78211558 | Syncc9605_R0010 | - | 08 Ser tRNA
|

381452 | 381523 | + | 72 | 78211558 | Syncc9605_R0011 | - | 05 Gln tRNA
|

394817 | 394890 | + | 74 | 78211558 | Syncc9605_R0012 | - | 11 Arg tRNA
|

410669 | 410739 | + | 71 | 78211558 | Syncc9605_R0013 | - | 19 Cys tRNA
|

443117 | 443192 | - | 76 | 78211558 | Syncc9605_R0014 | - | 17 Phe tRNA
|

465663 | 465734 | - | 72 | 78211558 | Syncc9605_R0015 | - | 12 Thr tRNA
|

473828 | 475267 | + | 1440 | 78211558 | Syncc9605_R0016 | - | 16S ribosomal RNA |

475473 | 475546 | + | 74 | 78211558 | Syncc9605_R0017 | - | 14 Ile tRNA
|

475556 | 475628 | + | 73 | 78211558 | Syncc9605_R0018 | - | 02 Ala tRNA
|

476063 | 478928 | + | 2866 | 78211558 | Syncc9605_R0019 | - | 23S ribosomal RNA |

479041 | 479154 | + | 114 | 78211558 | Syncc9605_R0020 | - | 5S ribosomal RNA |

494153 | 494224 | - | 72 | 78211558 | Syncc9605_R0021 | - | 12 Thr tRNA
|

494235 | 494316 | - | 82 | 78211558 | Syncc9605_R0022 | - | 18 Tyr tRNA
|

551438 | 551511 | - | 74 | 78211558 | Syncc9605_R0023 | - | 11 Arg tRNA
|

604748 | 604819 | - | 72 | 78211558 | Syncc9605_R0024 | - | 13 Val tRNA
|

619575 | 619648 | - | 74 | 78211558 | Syncc9605_R0025 | - | 06 Asp tRNA
|

620089 | 620161 | - | 73 | 78211558 | Syncc9605_R0026 | - | 20 Trp tRNA
|

778388 | 778474 | + | 87 | 78211558 | Syncc9605_R0027 | - | 08 Ser tRNA
|

814916 | 815016 | + | 101 | 78211558 | Syncc9605_R0028 | - | SRP RNA; RNA component of signal recognition particle |

822296 | 822368 | - | 73 | 78211558 | Syncc9605_R0029 | - | 09 His tRNA
|

835603 | 835684 | - | 82 | 78211558 | Syncc9605_R0030 | - | 15 Leu tRNA
|

838685 | 838771 | + | 87 | 78211558 | Syncc9605_R0031 | - | 15 Leu tRNA
|

895865 | 895937 | + | 73 | 78211558 | Syncc9605_R0032 | - | 02 Ala tRNA
|

943285 | 943373 | - | 89 | 78211558 | Syncc9605_R0033 | - | 15 Leu tRNA
|

1078026 | 1078099 | - | 74 | 78211558 | Syncc9605_R0034 | - | 03 Pro tRNA
|

1192409 | 1192495 | - | 87 | 78211558 | Syncc9605_R0035 | - | 08 Ser tRNA
|

1240721 | 1240794 | + | 74 | 78211558 | Syncc9605_R0036 | - | 16 Met tRNA
|

1315834 | 1315920 | - | 87 | 78211558 | Syncc9605_R0037 | - | 08 Ser tRNA
|

1546958 | 1547029 | + | 72 | 78211558 | Syncc9605_R0038 | - | 10 Lys tRNA
|

1548406 | 1548479 | + | 74 | 78211558 | Syncc9605_R0039 | - | 03 Pro tRNA
|

1654070 | 1654146 | - | 77 | 78211558 | Syncc9605_R0040 | - | 16 Met tRNA
|

1737787 | 1737859 | + | 73 | 78211558 | Syncc9605_R0041 | - | 04 Glu tRNA
|

1907303 | 1907375 | + | 73 | 78211558 | Syncc9605_R0042 | - | 12 Thr tRNA
|

1919692 | 1919762 | - | 71 | 78211558 | Syncc9605_R0043 | - | 01 Gly tRNA
|

1971387 | 1971458 | + | 72 | 78211558 | Syncc9605_R0044 | - | 13 Val tRNA
|

2063339 | 2063593 | - | 255 | 78211558 | Syncc9605_R0045 | - | tmRNA |

2073505 | 2073586 | - | 82 | 78211558 | Syncc9605_R0046 | - | 15 Leu tRNA
|

2135706 | 2135819 | - | 114 | 78211558 | Syncc9605_R0047 | - | 5S ribosomal RNA |

2135932 | 2138797 | - | 2866 | 78211558 | Syncc9605_R0048 | - | 23S ribosomal RNA |

2139232 | 2139304 | - | 73 | 78211558 | Syncc9605_R0049 | - | 02 Ala tRNA
|

2139314 | 2139387 | - | 74 | 78211558 | Syncc9605_R0050 | - | 14 Ile tRNA
|

2139593 | 2141032 | - | 1440 | 78211558 | Syncc9605_R0051 | - | 16S ribosomal RNA |

2191230 | 2191301 | + | 72 | 78211558 | Syncc9605_R0052 | - | 07 Asn tRNA
|

2385485 | 2385555 | - | 71 | 78211558 | Syncc9605_R0053 | - | Xaa tRNA |

2400151 | 2400222 | - | 72 | 78211558 | Syncc9605_R0054 | - | 13 Val tRNA
|