Материалы:NC 009455

LOCUS NC_009455 1341892 bp DNA circular BCT 14-AUG-2007 DEFINITION Dehalococcoides sp. BAV1, complete genome. ACCESSION NC_009455 VERSION NC_009455.1 GI:147668652 KEYWORDS . SOURCE Dehalococcoides sp. BAV1 ORGANISM Dehalococcoides sp. BAV1 Bacteria; Chloroflexi; Dehalococcoidetes; Dehalococcoides. REFERENCE 1 (bases 1 to 1341892) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Pitluck,S., Lowry,S., Clum,A., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Ritalahti,K.M., Loeffler,F. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Dehalococcoides sp. BAV1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 1341892) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Pitluck,S., Lowry,S., Clum,A., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Ritalahti,K.M., Loeffler,F. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (03-MAY-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA REFERENCE 3 (bases 1 to 1341892) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000688. URL -- http://www.jgi.doe.gov JGI Project ID: 4000264 Source DNA and bacteria available from Frank Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank Loeffler (frank.loeffler@ce.gatech.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

47151 | 50104 | + | 2954 | 147668652 | DehaBAV1_R0001 | - | 23S ribosomal RNA |

50199 | 50321 | + | 123 | 147668652 | DehaBAV1_R0002 | - | 5S ribosomal RNA |

57444 | 57519 | + | 76 | 147668652 | DehaBAV1_R0003 | - | 02 Ala tRNA
|

223784 | 223859 | - | 76 | 147668652 | DehaBAV1_R0004 | - | 13 Val tRNA
|

312176 | 312251 | - | 76 | 147668652 | DehaBAV1_R0005 | - | 02 Ala tRNA
|

350362 | 350665 | + | 304 | 147668652 | DehaBAV1_R0006 | - | RNAse P |

372125 | 372199 | + | 75 | 147668652 | DehaBAV1_R0007 | - | 12 Thr tRNA
|

403848 | 403922 | - | 75 | 147668652 | DehaBAV1_R0008 | - | 16 Met tRNA
|

535171 | 535260 | - | 90 | 147668652 | DehaBAV1_R0009 | - | 08 Ser tRNA
|

644324 | 644413 | - | 90 | 147668652 | DehaBAV1_R0010 | - | 08 Ser tRNA
|

644450 | 644539 | - | 90 | 147668652 | DehaBAV1_R0011 | - | 08 Ser tRNA
|

646274 | 646345 | + | 72 | 147668652 | DehaBAV1_R0012 | - | 11 Arg tRNA
|

652466 | 652543 | + | 78 | 147668652 | DehaBAV1_R0013 | - | 03 Pro tRNA
|

654991 | 655065 | - | 75 | 147668652 | DehaBAV1_R0014 | - | 01 Gly tRNA
|

655617 | 655691 | + | 75 | 147668652 | DehaBAV1_R0015 | - | 16 Met tRNA
|

667738 | 667814 | + | 77 | 147668652 | DehaBAV1_R0016 | - | 11 Arg tRNA
|

677376 | 677460 | - | 85 | 147668652 | DehaBAV1_R0017 | - | 15 Leu tRNA
|

679908 | 679984 | + | 77 | 147668652 | DehaBAV1_R0018 | - | 03 Pro tRNA
|

719505 | 719580 | + | 76 | 147668652 | DehaBAV1_R0019 | - | 17 Phe tRNA
|

719655 | 719741 | + | 87 | 147668652 | DehaBAV1_R0020 | - | 15 Leu tRNA
|

719772 | 719845 | + | 74 | 147668652 | DehaBAV1_R0021 | - | 05 Gln tRNA
|

719856 | 719930 | + | 75 | 147668652 | DehaBAV1_R0022 | - | 07 Asn tRNA
|

726826 | 726898 | - | 73 | 147668652 | DehaBAV1_R0023 | - | 10 Lys tRNA
|

760830 | 760904 | + | 75 | 147668652 | DehaBAV1_R0024 | - | 01 Gly tRNA
|

782120 | 782195 | - | 76 | 147668652 | DehaBAV1_R0025 | - | 10 Lys tRNA
|

839073 | 839148 | - | 76 | 147668652 | DehaBAV1_R0026 | - | 11 Arg tRNA
|

839164 | 839239 | - | 76 | 147668652 | DehaBAV1_R0027 | - | 09 His tRNA
|

874886 | 874961 | - | 76 | 147668652 | DehaBAV1_R0028 | - | 12 Thr tRNA
|

875024 | 875107 | - | 84 | 147668652 | DehaBAV1_R0029 | - | 18 Tyr tRNA
|

875147 | 875219 | - | 73 | 147668652 | DehaBAV1_R0030 | - | 12 Thr tRNA
|

891868 | 891944 | - | 77 | 147668652 | DehaBAV1_R0031 | - | 14 Ile tRNA
|

892247 | 893755 | - | 1509 | 147668652 | DehaBAV1_R0032 | - | 16S ribosomal RNA |

895133 | 895209 | - | 77 | 147668652 | DehaBAV1_R0033 | - | 04 Glu tRNA
|

895222 | 895295 | - | 74 | 147668652 | DehaBAV1_R0034 | - | 05 Gln tRNA
|

914980 | 915056 | + | 77 | 147668652 | DehaBAV1_R0035 | - | 06 Asp tRNA
|

985134 | 985210 | - | 77 | 147668652 | DehaBAV1_R0036 | - | 13 Val tRNA
|

1112963 | 1113037 | + | 75 | 147668652 | DehaBAV1_R0037 | - | 16 Met tRNA
|

1171930 | 1172021 | - | 92 | 147668652 | DehaBAV1_R0038 | - | 08 Ser tRNA
|

1226125 | 1226201 | + | 77 | 147668652 | DehaBAV1_R0039 | - | 20 Trp tRNA
|

1226207 | 1226293 | + | 87 | 147668652 | DehaBAV1_R0040 | - | 15 Leu tRNA
|

1226307 | 1226381 | + | 75 | 147668652 | DehaBAV1_R0041 | - | 01 Gly tRNA
|

1226419 | 1226493 | + | 75 | 147668652 | DehaBAV1_R0042 | - | 19 Cys tRNA
|

1227433 | 1227517 | + | 85 | 147668652 | DehaBAV1_R0043 | - | 15 Leu tRNA
|

1243299 | 1243385 | + | 87 | 147668652 | DehaBAV1_R0044 | - | 15 Leu tRNA
|

1243391 | 1243468 | + | 78 | 147668652 | DehaBAV1_R0045 | - | 11 Arg tRNA
|

1243479 | 1243555 | + | 77 | 147668652 | DehaBAV1_R0046 | - | 13 Val tRNA
|

1266790 | 1267140 | + | 351 | 147668652 | DehaBAV1_R0047 | - | tmRNA |

1276021 | 1276093 | + | 73 | 147668652 | DehaBAV1_R0048 | - | 02 Ala tRNA
|

1295758 | 1295834 | + | 77 | 147668652 | DehaBAV1_R0049 | - | 11 Arg tRNA
|

1325135 | 1325210 | - | 76 | 147668652 | DehaBAV1_R0050 | - | 04 Glu tRNA
|

1337474 | 1337551 | + | 78 | 147668652 | DehaBAV1_R0051 | - | 03 Pro tRNA
|