Материалы:NC 009436

LOCUS NC_009436 4518712 bp DNA circular BCT 14-AUG-2007 DEFINITION Enterobacter sp. 638, complete genome. ACCESSION NC_009436 VERSION NC_009436.1 GI:146309667 KEYWORDS . SOURCE Enterobacter sp. 638 ORGANISM Enterobacter sp. 638 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter. REFERENCE 1 (bases 1 to 4518712) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T., Dalin,E., Tice,H., Pitluck,S., Kiss,H., Brettin,T., Bruce,D., Detter,J.C., Han,C., Tapia,R., Gilna,P., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Taghavi,S., Newman,L., Vangronsveld,J., van der Lelie,D. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome of Enterobacter sp. 638 JOURNAL Unpublished REFERENCE 2 (bases 1 to 4518712) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-MAY-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4518712) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T., Dalin,E., Tice,H., Pitluck,S., Kiss,H., Brettin,T., Bruce,D., Detter,J.C., Han,C., Tapia,R., Gilna,P., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Taghavi,S., Newman,L., Vangronsveld,J., van der Lelie,D. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (06-APR-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000653. URL -- http://www.jgi.doe.gov JGI Project ID: 4002721 Source DNA and bacteria available from Daniel van der Lelie (vdlelied@bnl.gov) Contacts: Daniel van der Lelie (vdlelied@bnl.gov) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

85915 | 86005 | - | 91 | 146309667 | Ent638_R0001 | - | Sec tRNA |

205148 | 205224 | + | 77 | 146309667 | Ent638_R0002 | - | 03 Pro tRNA
|

220280 | 220355 | + | 76 | 146309667 | Ent638_R0003 | - | 12 Thr tRNA
|

220364 | 220448 | + | 85 | 146309667 | Ent638_R0004 | - | 18 Tyr tRNA
|

220564 | 220638 | + | 75 | 146309667 | Ent638_R0005 | - | 01 Gly tRNA
|

220645 | 220720 | + | 76 | 146309667 | Ent638_R0006 | - | 12 Thr tRNA
|

250882 | 252426 | + | 1545 | 146309667 | Ent638_R0007 | - | 16S ribosomal RNA |

252506 | 252581 | + | 76 | 146309667 | Ent638_R0008 | - | 04 Glu tRNA
|

252813 | 255725 | + | 2913 | 146309667 | Ent638_R0009 | - | 23S ribosomal RNA |

255816 | 255942 | + | 127 | 146309667 | Ent638_R0010 | - | 5S ribosomal RNA |

371299 | 371374 | - | 76 | 146309667 | Ent638_R0011 | - | 17 Phe tRNA
|

399597 | 399672 | + | 76 | 146309667 | Ent638_R0012 | - | 01 Gly tRNA
|

399769 | 399844 | + | 76 | 146309667 | Ent638_R0013 | - | 01 Gly tRNA
|

399941 | 400016 | + | 76 | 146309667 | Ent638_R0014 | - | 01 Gly tRNA
|

523489 | 523573 | + | 85 | 146309667 | Ent638_R0015 | - | 15 Leu tRNA
|

596702 | 596788 | - | 87 | 146309667 | Ent638_R0016 | - | 15 Leu tRNA
|

596820 | 596906 | - | 87 | 146309667 | Ent638_R0017 | - | 15 Leu tRNA
|

596935 | 597021 | - | 87 | 146309667 | Ent638_R0018 | - | 15 Leu tRNA
|

838233 | 839777 | + | 1545 | 146309667 | Ent638_R0019 | - | 16S ribosomal RNA |

839845 | 839921 | + | 77 | 146309667 | Ent638_R0020 | - | 14 Ile tRNA
|

840030 | 840105 | + | 76 | 146309667 | Ent638_R0021 | - | 02 Ala tRNA
|

840314 | 843225 | + | 2912 | 146309667 | Ent638_R0022 | - | 23S ribosomal RNA |

843316 | 843439 | + | 124 | 146309667 | Ent638_R0023 | - | 5S ribosomal RNA |

843490 | 843566 | + | 77 | 146309667 | Ent638_R0024 | - | 06 Asp tRNA
|

852194 | 852270 | + | 77 | 146309667 | Ent638_R0025 | - | 06 Asp tRNA
|

875530 | 875605 | + | 76 | 146309667 | Ent638_R0026 | - | 12 Thr tRNA
|

1026638 | 1026755 | + | 118 | 146309667 | Ent638_R0027 | - | SRP RNA; RNA component of signal recognition particle |

1107772 | 1107848 | + | 77 | 146309667 | Ent638_R0028 | - | 11 Arg tRNA
|

1305246 | 1305320 | - | 75 | 146309667 | Ent638_R0029 | - | 05 Gln tRNA
|

1305358 | 1305432 | - | 75 | 146309667 | Ent638_R0030 | - | 05 Gln tRNA
|

1305478 | 1305554 | - | 77 | 146309667 | Ent638_R0031 | - | 16 Met tRNA
|

1305571 | 1305645 | - | 75 | 146309667 | Ent638_R0032 | - | 05 Gln tRNA
|

1305678 | 1305752 | - | 75 | 146309667 | Ent638_R0033 | - | 05 Gln tRNA
|

1305775 | 1305859 | - | 85 | 146309667 | Ent638_R0034 | - | 15 Leu tRNA
|

1305869 | 1305945 | - | 77 | 146309667 | Ent638_R0035 | - | 16 Met tRNA
|

1365991 | 1366066 | + | 76 | 146309667 | Ent638_R0036 | - | 10 Lys tRNA
|

1366189 | 1366264 | + | 76 | 146309667 | Ent638_R0037 | - | 13 Val tRNA
|

1366268 | 1366343 | + | 76 | 146309667 | Ent638_R0038 | - | 10 Lys tRNA
|

1366484 | 1366559 | + | 76 | 146309667 | Ent638_R0039 | - | 10 Lys tRNA
|

1366590 | 1366665 | + | 76 | 146309667 | Ent638_R0040 | - | 10 Lys tRNA
|

1638951 | 1639038 | + | 88 | 146309667 | Ent638_R0041 | - | 08 Ser tRNA
|

1639171 | 1639258 | + | 88 | 146309667 | Ent638_R0042 | - | 08 Ser tRNA
|

1706012 | 1706099 | - | 88 | 146309667 | Ent638_R0043 | - | 08 Ser tRNA
|

1706328 | 1706415 | - | 88 | 146309667 | Ent638_R0044 | - | 08 Ser tRNA
|

1938960 | 1939036 | - | 77 | 146309667 | Ent638_R0045 | - | 13 Val tRNA
|

1939041 | 1939117 | - | 77 | 146309667 | Ent638_R0046 | - | 13 Val tRNA
|

2490349 | 2490433 | + | 85 | 146309667 | Ent638_R0047 | - | 18 Tyr tRNA
|

2490642 | 2490726 | + | 85 | 146309667 | Ent638_R0048 | - | 18 Tyr tRNA
|

2696719 | 2696804 | - | 86 | 146309667 | Ent638_R0049 | - | 15 Leu tRNA
|

2696817 | 2696890 | - | 74 | 146309667 | Ent638_R0050 | - | 19 Cys tRNA
|

2696937 | 2697012 | - | 76 | 146309667 | Ent638_R0051 | - | 01 Gly tRNA
|

2759751 | 2759846 | - | 96 | 146309667 | Ent638_R0052 | - | Xaa tRNA |

2760835 | 2760910 | + | 76 | 146309667 | Ent638_R0053 | - | 07 Asn tRNA
|

2763761 | 2763836 | + | 76 | 146309667 | Ent638_R0054 | - | 07 Asn tRNA
|

2778273 | 2778348 | - | 76 | 146309667 | Ent638_R0055 | - | 07 Asn tRNA
|

2780100 | 2780175 | + | 76 | 146309667 | Ent638_R0056 | - | 07 Asn tRNA
|

3009772 | 3009848 | + | 77 | 146309667 | Ent638_R0057 | - | 03 Pro tRNA
|

3125404 | 3125478 | + | 75 | 146309667 | Ent638_R0058 | - | 11 Arg tRNA
|

3180686 | 3180761 | - | 76 | 146309667 | Ent638_R0059 | - | 02 Ala tRNA
|

3180801 | 3180876 | - | 76 | 146309667 | Ent638_R0060 | - | 02 Ala tRNA
|

3183575 | 3183650 | + | 76 | 146309667 | Ent638_R0061 | - | 13 Val tRNA
|

3183695 | 3183770 | + | 76 | 146309667 | Ent638_R0062 | - | 13 Val tRNA
|

3183807 | 3183882 | + | 76 | 146309667 | Ent638_R0063 | - | 13 Val tRNA
|

3183886 | 3183961 | + | 76 | 146309667 | Ent638_R0064 | - | 10 Lys tRNA
|

3342737 | 3342863 | - | 127 | 146309667 | Ent638_R0065 | - | 5S ribosomal RNA |

3342953 | 3345864 | - | 2912 | 146309667 | Ent638_R0066 | - | 23S ribosomal RNA |

3346096 | 3346171 | - | 76 | 146309667 | Ent638_R0067 | - | 04 Glu tRNA
|

3346252 | 3347796 | - | 1545 | 146309667 | Ent638_R0068 | - | 16S ribosomal RNA |

3374760 | 3375119 | + | 360 | 146309667 | Ent638_R0069 | - | tmRNA |

3453621 | 3453697 | - | 77 | 146309667 | Ent638_R0070 | - | 11 Arg tRNA
|

3453727 | 3453803 | - | 77 | 146309667 | Ent638_R0071 | - | 11 Arg tRNA
|

3453833 | 3453909 | - | 77 | 146309667 | Ent638_R0072 | - | 11 Arg tRNA
|

3454107 | 3454183 | - | 77 | 146309667 | Ent638_R0073 | - | 11 Arg tRNA
|

3454188 | 3454280 | - | 93 | 146309667 | Ent638_R0074 | - | 08 Ser tRNA
|

3552385 | 3552461 | + | 77 | 146309667 | Ent638_R0075 | - | 16 Met tRNA
|

3552521 | 3552597 | + | 77 | 146309667 | Ent638_R0076 | - | 16 Met tRNA
|

3552655 | 3552731 | + | 77 | 146309667 | Ent638_R0077 | - | 16 Met tRNA
|

3610093 | 3610166 | - | 74 | 146309667 | Ent638_R0078 | - | 01 Gly tRNA
|

3687340 | 3687415 | + | 76 | 146309667 | Ent638_R0079 | - | 17 Phe tRNA
|

3783413 | 3783488 | + | 76 | 146309667 | Ent638_R0080 | - | 16 Met tRNA
|

3913153 | 3913229 | - | 77 | 146309667 | Ent638_R0081 | - | 16 Met tRNA
|

3915107 | 3915193 | - | 87 | 146309667 | Ent638_R0082 | - | 15 Leu tRNA
|

4023722 | 4023853 | - | 132 | 146309667 | Ent638_R0083 | - | 5S ribosomal RNA |

4023887 | 4023962 | - | 76 | 146309667 | Ent638_R0084 | - | 12 Thr tRNA
|

4023973 | 4024096 | - | 124 | 146309667 | Ent638_R0085 | - | 5S ribosomal RNA |

4024186 | 4027097 | - | 2912 | 146309667 | Ent638_R0086 | - | 23S ribosomal RNA |

4027329 | 4027404 | - | 76 | 146309667 | Ent638_R0087 | - | 04 Glu tRNA
|

4027485 | 4029029 | - | 1545 | 146309667 | Ent638_R0088 | - | 16S ribosomal RNA |

4269384 | 4269510 | - | 127 | 146309667 | Ent638_R0089 | - | 5S ribosomal RNA |

4269600 | 4272511 | - | 2912 | 146309667 | Ent638_R0090 | - | 23S ribosomal RNA |

4272720 | 4272795 | - | 76 | 146309667 | Ent638_R0091 | - | 02 Ala tRNA
|

4272904 | 4272980 | - | 77 | 146309667 | Ent638_R0092 | - | 14 Ile tRNA
|

4273048 | 4274592 | - | 1545 | 146309667 | Ent638_R0093 | - | 16S ribosomal RNA |

4327269 | 4327345 | - | 77 | 146309667 | Ent638_R0094 | - | 03 Pro tRNA
|

4327389 | 4327475 | - | 87 | 146309667 | Ent638_R0095 | - | 15 Leu tRNA
|

4327495 | 4327570 | - | 76 | 146309667 | Ent638_R0096 | - | 09 His tRNA
|

4327637 | 4327713 | - | 77 | 146309667 | Ent638_R0097 | - | 11 Arg tRNA
|

4360201 | 4360276 | - | 76 | 146309667 | Ent638_R0098 | - | 20 Trp tRNA
|

4360331 | 4360407 | - | 77 | 146309667 | Ent638_R0099 | - | 06 Asp tRNA
|

4360459 | 4360582 | - | 124 | 146309667 | Ent638_R0100 | - | 5S ribosomal RNA |

4360672 | 4363584 | - | 2913 | 146309667 | Ent638_R0101 | - | 23S ribosomal RNA |

4363793 | 4363868 | - | 76 | 146309667 | Ent638_R0102 | - | 02 Ala tRNA
|

4363977 | 4364053 | - | 77 | 146309667 | Ent638_R0103 | - | 14 Ile tRNA
|

4364121 | 4365665 | - | 1545 | 146309667 | Ent638_R0104 | - | 16S ribosomal RNA |

4466199 | 4466325 | - | 127 | 146309667 | Ent638_R0105 | - | 5S ribosomal RNA |

4466415 | 4469326 | - | 2912 | 146309667 | Ent638_R0106 | - | 23S ribosomal RNA |

4469558 | 4469633 | - | 76 | 146309667 | Ent638_R0107 | - | 04 Glu tRNA
|

4469715 | 4471259 | - | 1545 | 146309667 | Ent638_R0108 | - | 16S ribosomal RNA |