Материалы:NC 006511

```
LOCUS NC_006511 4585229 bp DNA circular BCT 03-DEC-2005
DEFINITION Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, complete genome.
ACCESSION NC_006511
VERSION NC_006511.1 GI:56412276
KEYWORDS .
SOURCE Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
ORGANISM Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Salmonella.
REFERENCE 1 (bases 1 to 4585229)
AUTHORS McClelland,M., Sanderson,K.E., Clifton,S.W., Latreille,P.,
Porwollik,S., Sabo,A., Meyer,R., Bieri,T., Ozersky,P., McLellan,M.,
Harkins,C.R., Wang,C., Nguyen,C., Berghoff,A., Elliott,G.,
Kohlberg,S., Strong,C., Du,F., Carter,J., Kremizki,C., Layman,D.,
Leonard,S., Sun,H., Fulton,L., Nash,W., Miner,T., Minx,P.,
Delehaunty,K., Fronick,C., Magrini,V., Nhan,M., Warren,W.,
Florea,L., Spieth,J. and Wilson,R.K.
TITLE Comparison of genome degradation in Paratyphi A and Typhi,
human-restricted serovars of Salmonella enterica that cause typhoid
JOURNAL Nat. Genet. 36 (12), 1268-1274 (2004)
PUBMED 15531882
REFERENCE 2 (bases 1 to 4585229)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 4585229)
AUTHORS McClelland,M., Sanderson,K.E., Clifton,S.W., Latreille,P.,
Porwollik,S., Sabo,A., Meyer,R., Bieri,T., Ozersky,P., McLellan,M.,
Harkins,R., Wang,C., Nguyen,C., Burghoff,A., Elliott,G.,
Kohlberg,S., Strong,C., Ali,J., Dante,M., Du,F., Layman,D.,
Leonard,S., Sun,H., Fulton,L., Nash,W., Miner,T., Delehaunty,K.,
Fronick,C., Florea,L., Spieth,J., Nhan,M. and Wilson,R.K.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2004) Genome Sequencing Center, Washington
University, 4444 Forest Park Ave., St. Louis, MO 63108, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000026.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

258278 | 258416 | + | 139 | 56412276 | SPA0222 | - | t44; sRNA gene |

293322 | 294867 | + | 1546 | 56412276 | SPA0256 | - | 16S ribosomal RNA |

294932 | 295005 | + | 74 | 56412276 | SPA0257 | - | 14 Ile tRNA
|

295118 | 295190 | + | 73 | 56412276 | SPA0258 | - | 02 Ala tRNA
|

295377 | 298280 | + | 2904 | 56412276 | SPA0259 | - | 23S ribosomal RNA |

298375 | 298496 | + | 122 | 56412276 | SPA0261 | - | 5S ribosomal RNA |

338818 | 338966 | + | 149 | 56412276 | SPA0301 | - | tke1; sRNA gene |

371264 | 371557 | - | 294 | 56412276 | SPA0332 | - | ryfA; sRNA gene |

511051 | 511123 | - | 73 | 56412276 | SPA0442 | - | 10 Lys tRNA
|

511131 | 511203 | - | 73 | 56412276 | SPA0443 | - | 13 Val tRNA
|

511248 | 511320 | - | 73 | 56412276 | SPA0444 | - | 13 Val tRNA
|

511369 | 511441 | - | 73 | 56412276 | SPA0445 | - | 13 Val tRNA
|

514147 | 514219 | + | 73 | 56412276 | SPA0449 | - | 02 Ala tRNA
|

542019 | 542090 | - | 72 | 56412276 | SPA0470 | - | 11 Arg tRNA
|

678264 | 678620 | - | 357 | 56412276 | SPA0596 | - | micF RNA gene |

700300 | 700366 | - | 67 | 56412276 | SPA0621 | - | |

824722 | 824858 | - | 137 | 56412276 | SPA0740 | - | tp8; sRNA |

949756 | 949828 | - | 73 | 56412276 | SPA0858 | - | 07 Asn tRNA
|

951587 | 951659 | + | 73 | 56412276 | SPA0860 | - | 07 Asn tRNA
|

955022 | 955094 | - | 73 | 56412276 | SPA0865 | - | 07 Asn tRNA
|

955645 | 955717 | - | 73 | 56412276 | SPA0868 | - | 07 Asn tRNA
|

956704 | 956790 | + | 87 | 56412276 | SPA0870 | - | 08 Ser tRNA
|

970205 | 970285 | - | 81 | 56412276 | SPA0885 | - | dsrA RNA gene |

1002560 | 1002632 | + | 73 | 56412276 | SPA0925 | - | 01 Gly tRNA
|

1002688 | 1002758 | + | 71 | 56412276 | SPA0926 | - | 19 Cys tRNA
|

1002773 | 1002856 | + | 84 | 56412276 | SPA0927 | - | 15 Leu tRNA
|

1188501 | 1188621 | - | 121 | 56412276 | SPA1114 | - | rtT RNA gene |

1188676 | 1188796 | - | 121 | 56412276 | SPA1115 | - | rtT RNA gene |

1188851 | 1188971 | - | 121 | 56412276 | SPA1116 | - | rtT RNA gene |

1189026 | 1189146 | - | 121 | 56412276 | SPA1117 | - | rtT RNA gene |

1189201 | 1189321 | - | 121 | 56412276 | SPA1118 | - | rtT RNA gene |

1189381 | 1189462 | - | 82 | 56412276 | SPA1119 | - | 18 Tyr tRNA
|

1189500 | 1189581 | - | 82 | 56412276 | SPA1120 | - | 18 Tyr tRNA
|

1296971 | 1297044 | + | 74 | 56412276 | SPA1229 | - | C0343; sRNA gene |

1303435 | 1303545 | + | 111 | 56412276 | SPA1235 | - | IS063; sRNA gene |

1510488 | 1510561 | + | 74 | 56412276 | SPA1429 | - | 13 Val tRNA
|

1510575 | 1510648 | + | 74 | 56412276 | SPA1430 | - | 13 Val tRNA
|

1562118 | 1562184 | - | 67 | 56412276 | SPA1487 | - | rydB; sRNA gene |

1567673 | 1567779 | - | 107 | 56412276 | SPA1492 | - | rprA; sRNA gene |

1645915 | 1645987 | + | 73 | 56412276 | SPA1572 | - | sraI; sRNA gene |

1653142 | 1653215 | - | 74 | 56412276 | SPA1584 | - | 11 Arg tRNA
|

1663379 | 1663452 | - | 74 | 56412276 | SPA1597 | - | 11 Arg tRNA
|

1724955 | 1725120 | - | 166 | 56412276 | SPA1662 | - | sraB; sRNA gene |

1774048 | 1774132 | + | 85 | 56412276 | SPA1717 | - | 08 Ser tRNA
|

1822918 | 1823002 | - | 85 | 56412276 | SPA1764 | - | 08 Ser tRNA
|

1925006 | 1925090 | + | 85 | 56412276 | SPA1849 | - | 08 Ser tRNA
|

2070950 | 2071022 | - | 73 | 56412276 | SPA1988 | - | 10 Lys tRNA
|

2071161 | 2071233 | - | 73 | 56412276 | SPA1989 | - | 10 Lys tRNA
|

2071379 | 2071451 | - | 73 | 56412276 | SPA1990 | - | 10 Lys tRNA
|

2071458 | 2071530 | - | 73 | 56412276 | SPA1991 | - | 13 Val tRNA
|

2071670 | 2071742 | - | 73 | 56412276 | SPA1992 | - | 10 Lys tRNA
|

2152041 | 2152114 | + | 74 | 56412276 | SPA2062 | - | 16 Met tRNA
|

2152128 | 2152209 | + | 82 | 56412276 | SPA2063 | - | 15 Leu tRNA
|

2152236 | 2152307 | + | 72 | 56412276 | SPA2064 | - | 05 Gln tRNA
|

2152346 | 2152417 | + | 72 | 56412276 | SPA2065 | - | 05 Gln tRNA
|

2152436 | 2152509 | + | 74 | 56412276 | SPA2066 | - | 16 Met tRNA
|

2152559 | 2152630 | + | 72 | 56412276 | SPA2067 | - | 05 Gln tRNA
|

2152677 | 2152748 | + | 72 | 56412276 | SPA2068 | - | 05 Gln tRNA
|

2260936 | 2261009 | - | 74 | 56412276 | SPA2172 | - | 11 Arg tRNA
|

2348922 | 2349059 | - | 138 | 56412276 | SPA2255 | - | 4.5S_RNA |

2527600 | 2527672 | - | 73 | 56412276 | SPA2432 | - | 12 Thr tRNA
|

2604686 | 2604759 | - | 74 | 56412276 | SPA2504 | - | 06 Asp tRNA
|

2614126 | 2614199 | - | 74 | 56412276 | SPA2515 | - | 06 Asp tRNA
|

2614386 | 2614508 | - | 123 | 56412276 | SPA2516 | - | 5S ribosomal RNA |

2614703 | 2617610 | - | 2908 | 56412276 | SPA2517 | - | 23S ribosomal RNA |

2617807 | 2617879 | - | 73 | 56412276 | SPA2519 | - | 04 Glu tRNA
|

2617962 | 2619506 | - | 1545 | 56412276 | SPA2520 | - | 16S ribosomal RNA |

2661644 | 2662110 | + | 467 | 56412276 | SPA2552 | - | 10Sa_RNA |

2782679 | 2782754 | + | 76 | 56412276 | SPA2676 | - | sraD; sRNA gene |

2785623 | 2785696 | - | 74 | 56412276 | SPA2680 | - | 11 Arg tRNA
|

2785762 | 2785835 | - | 74 | 56412276 | SPA2681 | - | 11 Arg tRNA
|

2785900 | 2785973 | - | 74 | 56412276 | SPA2682 | - | 11 Arg tRNA
|

2785980 | 2786069 | - | 90 | 56412276 | SPA2683 | - | 08 Ser tRNA
|

2907715 | 2907813 | - | 99 | 56412276 | SPA2808 | - | IS092; sRNA gene |

2934332 | 2934686 | + | 355 | 56412276 | SPA2830 | - | csrB; sRNA gene |

2952947 | 2953151 | + | 205 | 56412276 | SPA2847 | - | gcvB; sRNA gene |

2958694 | 2958767 | + | 74 | 56412276 | SPA2854 | - | 16 Met tRNA
|

2958800 | 2958873 | + | 74 | 56412276 | SPA2855 | - | 16 Met tRNA
|

2987955 | 2988041 | - | 87 | 56412276 | SPA2876 | - | sraE; sRNA gene |

2987961 | 2988049 | - | 89 | 56412276 | SPA2877 | - | rygB; sRNA gene |

3015045 | 3015115 | - | 71 | 56412276 | SPA2905 | - | 01 Gly tRNA
|

3039718 | 3039900 | + | 183 | 56412276 | SPA2930 | - | ssrS; sRNA gene |

3040570 | 3040713 | + | 144 | 56412276 | SPA2932 | - | tp8; sRNA gene |

3085505 | 3085577 | + | 73 | 56412276 | SPA2979 | - | 17 Phe tRNA
|

3189462 | 3189534 | + | 73 | 56412276 | SPA3081 | - | 16 Met tRNA
|

3202526 | 3202712 | + | 187 | 56412276 | SPA3092 | - | sraF; sRNA gene |

3224909 | 3225283 | + | 375 | 56412276 | SPA3115 | - | rnpB RNA gene |

3260192 | 3260361 | + | 170 | 56412276 | SPA3150 | - | sraG; sRNA gene |

3267261 | 3267334 | - | 74 | 56412276 | SPA3157 | - | 16 Met tRNA
|

3269222 | 3269305 | - | 84 | 56412276 | SPA3159 | - | 15 Leu tRNA
|

3297846 | 3297950 | + | 105 | 56412276 | SPA3195 | - | sraH; sRNA gene |

3373135 | 3373254 | - | 120 | 56412276 | SPA3260 | - | 5S ribosomal RNA |

3373295 | 3373367 | - | 73 | 56412276 | SPA3261 | - | 12 Thr tRNA
|

3373380 | 3373499 | - | 120 | 56412276 | SPA3262 | - | 5S ribosomal RNA |

3373591 | 3376497 | - | 2907 | 56412276 | SPA3263 | - | 23S ribosomal RNA |

3376695 | 3376767 | - | 73 | 56412276 | SPA3264 | - | 04 Glu tRNA
|

3376853 | 3378394 | - | 1542 | 56412276 | SPA3265 | - | 16S ribosomal RNA |

3506522 | 3506615 | - | 94 | 56412276 | SPA3397 | - | sraI; sRNA gene |

3614032 | 3614105 | - | 74 | 56412276 | SPA3491 | - | 03 Pro tRNA
|

3736414 | 3736504 | + | 91 | 56412276 | SPA3602 | - | Sec tRNA |

3875155 | 3876696 | + | 1542 | 56412276 | SPA3728 | - | 16S ribosomal RNA |

3876782 | 3876854 | + | 73 | 56412276 | SPA3729 | - | 04 Glu tRNA
|

3877051 | 3879959 | + | 2909 | 56412276 | SPA3730 | - | 23S ribosomal RNA |

3880051 | 3880168 | + | 118 | 56412276 | SPA3732 | - | 5S ribosomal RNA |

3880223 | 3880296 | + | 74 | 56412276 | SPA3733 | - | 06 Asp tRNA
|

3880308 | 3880380 | + | 73 | 56412276 | SPA3734 | - | 20 Trp tRNA
|

3919122 | 3919195 | + | 74 | 56412276 | SPA3771 | - | 11 Arg tRNA
|

3919253 | 3919325 | + | 73 | 56412276 | SPA3772 | - | 09 His tRNA
|

3919349 | 3919432 | + | 84 | 56412276 | SPA3773 | - | 15 Leu tRNA
|

3919478 | 3919551 | + | 74 | 56412276 | SPA3774 | - | 03 Pro tRNA
|

3919861 | 3920034 | + | 174 | 56412276 | SPA3775 | - | sraJ; sRNA gene |

3974288 | 3975829 | + | 1542 | 56412276 | SPA3828 | - | 16S ribosomal RNA |

3975899 | 3975972 | + | 74 | 56412276 | SPA3829 | - | 14 Ile tRNA
|

3976085 | 3976157 | + | 73 | 56412276 | SPA3830 | - | 02 Ala tRNA
|

3976343 | 3979251 | + | 2909 | 56412276 | SPA3831 | - | 23S ribosomal RNA |

3979343 | 3979462 | + | 120 | 56412276 | SPA3833 | - | 5S ribosomal RNA |

3987144 | 3987253 | - | 110 | 56412276 | SPA3841 | - | spf RNA gene |

4116606 | 4116789 | - | 184 | 56412276 | SPA3962 | - | oxyS RNA gene |

4124880 | 4126420 | + | 1541 | 56412276 | SPA3970 | - | 16S ribosomal RNA |

4126490 | 4126563 | + | 74 | 56412276 | SPA3971 | - | 14 Ile tRNA
|

4126676 | 4126748 | + | 73 | 56412276 | SPA3972 | - | 02 Ala tRNA
|

4126934 | 4129842 | + | 2909 | 56412276 | SPA3973 | - | 23S ribosomal RNA |

4129935 | 4130054 | + | 120 | 56412276 | SPA3975 | - | 5S ribosomal RNA |

4133675 | 4133747 | + | 73 | 56412276 | SPA3980 | - | 12 Thr tRNA
|

4133759 | 4133840 | + | 82 | 56412276 | SPA3981 | - | 18 Tyr tRNA
|

4133960 | 4134031 | + | 72 | 56412276 | SPA3982 | - | 01 Gly tRNA
|

4134041 | 4134113 | + | 73 | 56412276 | SPA3983 | - | 12 Thr tRNA
|

4166983 | 4168524 | + | 1542 | 56412276 | SPA4014 | - | 16S ribosomal RNA |

4168610 | 4168682 | + | 73 | 56412276 | SPA4015 | - | 04 Glu tRNA
|

4168879 | 4171788 | + | 2910 | 56412276 | SPA4016 | - | 23S ribosomal RNA |

4171879 | 4171998 | + | 120 | 56412276 | SPA4018 | - | 5S ribosomal RNA |

4256795 | 4256934 | - | 140 | 56412276 | SPA4083 | - | sraL; sRNA gene |

4316321 | 4316393 | - | 73 | 56412276 | SPA4137 | - | 17 Phe tRNA
|

4346248 | 4346320 | + | 73 | 56412276 | SPA4169 | - | 01 Gly tRNA
|

4346480 | 4346552 | + | 73 | 56412276 | SPA4170 | - | 01 Gly tRNA
|

4346712 | 4346784 | + | 73 | 56412276 | SPA4171 | - | 01 Gly tRNA
|

4461042 | 4461123 | + | 82 | 56412276 | SPA4287 | - | 15 Leu tRNA
|

4543201 | 4543284 | - | 84 | 56412276 | SPA4367 | - | 15 Leu tRNA
|

4543319 | 4543402 | - | 84 | 56412276 | SPA4368 | - | 15 Leu tRNA
|

4543433 | 4543516 | - | 84 | 56412276 | SPA4369 | - | 15 Leu tRNA
|