Материалы:NC 005945

```
LOCUS NC_005945 5228663 bp DNA circular BCT 03-APR-2006
DEFINITION Bacillus anthracis str. Sterne, complete genome.
ACCESSION NC_005945
VERSION NC_005945.1 GI:49183039
KEYWORDS .
SOURCE Bacillus anthracis str. Sterne
ORGANISM Bacillus anthracis str. Sterne
Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus
cereus group.
REFERENCE 1 (bases 1 to 5228663)
AUTHORS Brettin,T.S., Bruce,D., Challacombe,J.F., Gilna,P., Han,C.,
Hill,K., Hitchcock,P., Jackson,P., Keim,P., Longmire,J., Lucas,S.,
Okinaka,R., Richardson,P., Rubin,E. and Tice,H.
TITLE Complete genome sequence of Bacillus anthracis Sterne
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5228663)
AUTHORS .
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (11-SEP-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5228663)
AUTHORS Brettin,T.S., Bruce,D., Challacombe,J.F., Gilna,P., Han,C.,
Hill,K., Hitchcock,P., Jackson,P., Keim,P., Longmire,J., Lucas,S.,
Okinaka,R., Richardson,P., Rubin,E. and Tice,H.
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2004) Joint Genome Institute, Department of
Energy, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE017225.
The Sterne strain of Bacillus anthracis is lacking the plasmid
pXO2, resulting in an avirulent phenotype that maintains the main
anthrax toxin. Prevention of anthrax in cattle can be accomplished
by vaccination with living spores of the Sterne strain. Most
livestock vaccines in use throughout the world are derivatives of
the live spore vaccine formulated by Sterne in 1937 and still use
descendants of his strain 34F2 (Anthrax: the disease in relation to
vaccines. Hambleton, P, Carnabm J, and Melling J. Vaccine 1984
2:125-132 and Anthrax vaccines: past, present and future. Turnbull,
PC. Vaccine 1991 9(8):533-539). Plasmid and fosmid libraries were
prepared at the Joint Genome Institute in Los Alamos (JGI-LANL),
NM. Shotgun sequencing was performed at the JGI Production Genomics
Facility (JGI-PGF) in Walnut Creek, CA. to a coverage of 16x.
Finishing was performed at JGI-LANL starting with 39 contigs and 15
scaffolds. Repetitive regions were identified, assembled and
finished individually using a local software package called RepFin.
Twenty four gaps were closed with primer walks and 15 by PCR. Gene
predictions were performed using Glimmer and tRNAs were identified
using tRNAScan-SE. Basic analysis of the gene predictions was
performed by searching the coding sequence against the PFam,
BLOCKS, and Prodom databases. For the most part, gene definitions
were transferred directly from the TIGR Bacillus anthracis Ames
GenBank records using a bi-directional best hit mapping between the
two genomes. A total of 5415 features have been annotated on the
sequence record.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

9336 | 10845 | + | 1510 | 49183039 | rRNA-16s-1 | - | 16S ribosomal RNA |

10993 | 11072 | + | 80 | 49183039 | tRNA-Ile-2 | - | 14 Ile tRNA
|

11078 | 11156 | + | 79 | 49183039 | tRNA-Ala-2 | - | 02 Ala tRNA
|

11248 | 14158 | + | 2911 | 49183039 | rRNA-23s-1 | - | 23S ribosomal RNA |

14204 | 14322 | + | 119 | 49183039 | rRNA-5s-1 | - | 5S ribosomal RNA |

21770 | 21865 | + | 96 | 49183039 | tRNA-Ser-1 | - | 08 Ser tRNA
|

29130 | 30639 | + | 1510 | 49183039 | rRNA-16s-2 | - | 16S ribosomal RNA |

30787 | 30866 | + | 80 | 49183039 | tRNA-Ile-4 | - | 14 Ile tRNA
|

30872 | 30950 | + | 79 | 49183039 | tRNA-Ala-4 | - | 02 Ala tRNA
|

31042 | 33952 | + | 2911 | 49183039 | rRNA-23s-2 | - | 23S ribosomal RNA |

33998 | 34116 | + | 119 | 49183039 | rRNA-5s-2 | - | 5S ribosomal RNA |

64426 | 64502 | + | 77 | 49183039 | tRNA-Met-6 | - | 16 Met tRNA
|

64513 | 64587 | + | 75 | 49183039 | tRNA-Glu-5 | - | 04 Glu tRNA
|

82452 | 83961 | + | 1510 | 49183039 | rRNA-16s-3 | - | 16S ribosomal RNA |

84197 | 87047 | + | 2851 | 49183039 | rRNA-23s-3 | - | 23S ribosomal RNA |

87094 | 87212 | + | 119 | 49183039 | rRNA-5s-3 | - | 5S ribosomal RNA |

145516 | 147025 | + | 1510 | 49183039 | rRNA-16s-4 | - | 16S ribosomal RNA |

147201 | 150111 | + | 2911 | 49183039 | rRNA-23s-4 | - | 23S ribosomal RNA |

150195 | 150313 | + | 119 | 49183039 | rRNA-5s-4 | - | 5S ribosomal RNA |

150320 | 150397 | + | 78 | 49183039 | tRNA-Asn-4 | - | 07 Asn tRNA
|

150399 | 150474 | + | 76 | 49183039 | tRNA-Thr-5 | - | 12 Thr tRNA
|

150496 | 150573 | + | 78 | 49183039 | tRNA-Glu-4 | - | 04 Glu tRNA
|

150576 | 150654 | + | 79 | 49183039 | tRNA-Val-5 | - | 13 Val tRNA
|

150669 | 150755 | + | 87 | 49183039 | tRNA-Tyr-2 | - | 18 Tyr tRNA
|

150818 | 150895 | + | 78 | 49183039 | tRNA-Gln-4 | - | 05 Gln tRNA
|

150898 | 150976 | + | 79 | 49183039 | tRNA-Lys-4 | - | 10 Lys tRNA
|

150979 | 151053 | + | 75 | 49183039 | tRNA-Gly-3 | - | 01 Gly tRNA
|

151061 | 151136 | + | 76 | 49183039 | tRNA-Ala-1 | - | 02 Ala tRNA
|

245022 | 245099 | + | 78 | 49183039 | tRNA-Asn-1 | - | 07 Asn tRNA
|

245100 | 245193 | + | 94 | 49183039 | tRNA-Ser-7 | - | 08 Ser tRNA
|

245199 | 245276 | + | 78 | 49183039 | tRNA-Glu-7 | - | 04 Glu tRNA
|

245278 | 245356 | + | 79 | 49183039 | tRNA-Val-3 | - | 13 Val tRNA
|

245400 | 245478 | + | 79 | 49183039 | tRNA-Asp-3 | - | 06 Asp tRNA
|

245564 | 245641 | + | 78 | 49183039 | tRNA-Gln-2 | - | 05 Gln tRNA
|

245644 | 245719 | + | 76 | 49183039 | tRNA-Lys-2 | - | 10 Lys tRNA
|

245734 | 245822 | + | 89 | 49183039 | tRNA-Leu-4 | - | 15 Leu tRNA
|

245915 | 245994 | + | 80 | 49183039 | tRNA-Arg-2 | - | 11 Arg tRNA
|

245996 | 246075 | + | 80 | 49183039 | tRNA-Pro-1 | - | 03 Pro tRNA
|

246074 | 246147 | + | 74 | 49183039 | tRNA-Gly-6 | - | 01 Gly tRNA
|

246248 | 247757 | + | 1510 | 49183039 | rRNA-16s-5 | - | 16S ribosomal RNA |

247933 | 250843 | + | 2911 | 49183039 | rRNA-23s-5 | - | 23S ribosomal RNA |

250890 | 251008 | + | 119 | 49183039 | rRNA-5s-5 | - | 5S ribosomal RNA |

251018 | 251097 | + | 80 | 49183039 | tRNA-Met-7 | - | 16 Met tRNA
|

251098 | 251176 | + | 79 | 49183039 | tRNA-Asp-4 | - | 06 Asp tRNA
|

266827 | 268336 | + | 1510 | 49183039 | rRNA-16s-6 | - | 16S ribosomal RNA |

268512 | 271422 | + | 2911 | 49183039 | rRNA-23s-6 | - | 23S ribosomal RNA |

271469 | 271587 | + | 119 | 49183039 | rRNA-5s-6 | - | 5S ribosomal RNA |

280125 | 281634 | + | 1510 | 49183039 | rRNA-16s-7 | - | 16S ribosomal RNA |

281810 | 284720 | + | 2911 | 49183039 | rRNA-23s-7 | - | 23S ribosomal RNA |

284768 | 284886 | + | 119 | 49183039 | rRNA-5s-7 | - | 5S ribosomal RNA |

290098 | 291607 | + | 1510 | 49183039 | rRNA-16s-8 | - | 16S ribosomal RNA |

291783 | 294693 | + | 2911 | 49183039 | rRNA-23s-8 | - | 23S ribosomal RNA |

294741 | 294859 | + | 119 | 49183039 | rRNA-5s-8 | - | 5S ribosomal RNA |

532506 | 534014 | + | 1509 | 49183039 | rRNA-16s-9 | - | 16S ribosomal RNA |

534183 | 537093 | + | 2911 | 49183039 | rRNA-23s-9 | - | 23S ribosomal RNA |

537191 | 537309 | + | 119 | 49183039 | rRNA-5s-9 | - | 5S ribosomal RNA |

537315 | 537392 | + | 78 | 49183039 | tRNA-Asn-5 | - | 07 Asn tRNA
|

537392 | 537486 | + | 95 | 49183039 | tRNA-Ser-6 | - | 08 Ser tRNA
|

537501 | 537578 | + | 78 | 49183039 | tRNA-Glu-2 | - | 04 Glu tRNA
|

537581 | 537659 | + | 79 | 49183039 | tRNA-Val-6 | - | 13 Val tRNA
|

537681 | 537760 | + | 80 | 49183039 | tRNA-Met-3 | - | 16 Met tRNA
|

537761 | 537839 | + | 79 | 49183039 | tRNA-Asp-6 | - | 06 Asp tRNA
|

537846 | 537924 | + | 79 | 49183039 | tRNA-Phe-4 | - | 17 Phe tRNA
|

537940 | 538018 | + | 79 | 49183039 | tRNA-Thr-4 | - | 12 Thr tRNA
|

538026 | 538112 | + | 87 | 49183039 | tRNA-Tyr-1 | - | 18 Tyr tRNA
|

538117 | 538193 | + | 77 | 49183039 | tRNA-Trp-2 | - | 20 Trp tRNA
|

538210 | 538288 | + | 79 | 49183039 | tRNA-His-2 | - | 09 His tRNA
|

538349 | 538426 | + | 78 | 49183039 | tRNA-Gln-1 | - | 05 Gln tRNA
|

538429 | 538506 | + | 78 | 49183039 | tRNA-Gly-8 | - | 01 Gly tRNA
|

538518 | 538591 | + | 74 | 49183039 | tRNA-Cys-1 | - | 19 Cys tRNA
|

538599 | 538686 | + | 88 | 49183039 | tRNA-Leu-5 | - | 15 Leu tRNA
|

543114 | 543190 | + | 77 | 49183039 | tRNA-Gly-1 | - | 01 Gly tRNA
|

741460 | 742969 | + | 1510 | 49183039 | rRNA-16s-10 | - | 16S ribosomal RNA |

743145 | 746055 | + | 2911 | 49183039 | rRNA-23s-10 | - | 23S ribosomal RNA |

746154 | 746272 | + | 119 | 49183039 | rRNA-5s-10 | - | 5S ribosomal RNA |

746275 | 746353 | + | 79 | 49183039 | tRNA-Val-4 | - | 13 Val tRNA
|

746362 | 746439 | + | 78 | 49183039 | tRNA-Gln-3 | - | 05 Gln tRNA
|

746441 | 746519 | + | 79 | 49183039 | tRNA-Lys-1 | - | 10 Lys tRNA
|

746531 | 746614 | + | 84 | 49183039 | tRNA-Leu-3 | - | 15 Leu tRNA
|

746641 | 746718 | + | 78 | 49183039 | tRNA-Gly-5 | - | 01 Gly tRNA
|

746732 | 746823 | + | 92 | 49183039 | tRNA-Leu-1 | - | 15 Leu tRNA
|

746824 | 746900 | + | 77 | 49183039 | tRNA-Arg-3 | - | 11 Arg tRNA
|

746908 | 746984 | + | 77 | 49183039 | tRNA-Pro-2 | - | 03 Pro tRNA
|

746998 | 747073 | + | 76 | 49183039 | tRNA-Ala-3 | - | 02 Ala tRNA
|

747091 | 747186 | + | 96 | 49183039 | tRNA-Ser-2 | - | 08 Ser tRNA
|

747238 | 747333 | + | 96 | 49183039 | tRNA-Ser-5 | - | 08 Ser tRNA
|

747351 | 747430 | + | 80 | 49183039 | tRNA-Met-2 | - | 16 Met tRNA
|

747432 | 747510 | + | 79 | 49183039 | tRNA-Asp-5 | - | 06 Asp tRNA
|

747516 | 747594 | + | 79 | 49183039 | tRNA-Phe-3 | - | 17 Phe tRNA
|

747601 | 747676 | + | 76 | 49183039 | tRNA-Thr-1 | - | 12 Thr tRNA
|

747680 | 747753 | + | 74 | 49183039 | tRNA-Trp-1 | - | 20 Trp tRNA
|

747761 | 747840 | + | 80 | 49183039 | tRNA-Ile-3 | - | 14 Ile tRNA
|

747846 | 747923 | + | 78 | 49183039 | tRNA-Asn-2 | - | 07 Asn tRNA
|

747922 | 747996 | + | 75 | 49183039 | tRNA-Glu-3 | - | 04 Glu tRNA
|

1232543 | 1232618 | - | 76 | 49183039 | tRNA-Val-1 | - | 13 Val tRNA
|

4095081 | 4095157 | - | 77 | 49183039 | tRNA-Met-8 | - | 16 Met tRNA
|

4287997 | 4288076 | - | 80 | 49183039 | tRNA-Arg-5 | - | 11 Arg tRNA
|

4288075 | 4288151 | - | 77 | 49183039 | tRNA-Gly-2 | - | 01 Gly tRNA
|

4651159 | 4651233 | - | 75 | 49183039 | tRNA-Glu-6 | - | 04 Glu tRNA
|

4651237 | 4651330 | - | 94 | 49183039 | tRNA-Ser-4 | - | 08 Ser tRNA
|

4651335 | 4651412 | - | 78 | 49183039 | tRNA-Asn-3 | - | 07 Asn tRNA
|

4651417 | 4651496 | - | 80 | 49183039 | tRNA-Ile-1 | - | 14 Ile tRNA
|

4651504 | 4651577 | - | 74 | 49183039 | tRNA-Gly-7 | - | 01 Gly tRNA
|

4651588 | 4651666 | - | 79 | 49183039 | tRNA-Lys-3 | - | 10 Lys tRNA
|

4651674 | 4651752 | - | 79 | 49183039 | tRNA-Thr-3 | - | 12 Thr tRNA
|

4651764 | 4651842 | - | 79 | 49183039 | tRNA-Phe-1 | - | 17 Phe tRNA
|

4651852 | 4651930 | - | 79 | 49183039 | tRNA-Asp-1 | - | 06 Asp tRNA
|

4651929 | 4652008 | - | 80 | 49183039 | tRNA-Met-4 | - | 16 Met tRNA
|

4652033 | 4652128 | - | 96 | 49183039 | tRNA-Ser-3 | - | 08 Ser tRNA
|

4652143 | 4652222 | - | 80 | 49183039 | tRNA-Met-1 | - | 16 Met tRNA
|

4652224 | 4652303 | - | 80 | 49183039 | tRNA-Met-5 | - | 16 Met tRNA
|

4652321 | 4652396 | - | 76 | 49183039 | tRNA-Ala-5 | - | 02 Ala tRNA
|

4652409 | 4652485 | - | 77 | 49183039 | tRNA-Pro-3 | - | 03 Pro tRNA
|

4652493 | 4652569 | - | 77 | 49183039 | tRNA-Arg-1 | - | 11 Arg tRNA
|

4652570 | 4652661 | - | 92 | 49183039 | tRNA-Leu-2 | - | 15 Leu tRNA
|

4652675 | 4652752 | - | 78 | 49183039 | tRNA-Gly-4 | - | 01 Gly tRNA
|

4652779 | 4652862 | - | 84 | 49183039 | tRNA-Leu-6 | - | 15 Leu tRNA
|

4652882 | 4652960 | - | 79 | 49183039 | tRNA-His-1 | - | 09 His tRNA
|

4652967 | 4653045 | - | 79 | 49183039 | tRNA-Thr-2 | - | 12 Thr tRNA
|

4653047 | 4653125 | - | 79 | 49183039 | tRNA-Val-2 | - | 13 Val tRNA
|

4653133 | 4653241 | - | 109 | 49183039 | rRNA-5s-11 | - | 5S ribosomal RNA |

4653344 | 4656254 | - | 2911 | 49183039 | rRNA-23s-11 | - | 23S ribosomal RNA |

4656430 | 4657939 | - | 1510 | 49183039 | rRNA-16s-11 | - | 16S ribosomal RNA |

4868696 | 4868777 | - | 82 | 49183039 | tRNA-Arg-4 | - | 11 Arg tRNA
|

5208043 | 5208118 | - | 76 | 49183039 | tRNA-Phe-2 | - | 17 Phe tRNA
|

5208157 | 5208235 | - | 79 | 49183039 | tRNA-Asp-2 | - | 06 Asp tRNA
|

5208253 | 5208327 | - | 75 | 49183039 | tRNA-Glu-1 | - | 04 Glu tRNA
|

5208338 | 5208416 | - | 79 | 49183039 | tRNA-Lys-5 | - | 10 Lys tRNA
|