Материалы:NC 007510

LOCUS NC_007510 3694126 bp DNA circular BCT 18-JAN-2006 DEFINITION Burkholderia sp. 383 chromosome 1, complete sequence. ACCESSION NC_007510 VERSION NC_007510.1 GI:78064658 KEYWORDS . SOURCE Burkholderia sp. 383 ORGANISM Burkholderia sp. 383 Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. REFERENCE 1 (bases 1 to 3694126) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Lykidis,A. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome 1 of Burkholderia sp. 383 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3694126) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-OCT-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3694126) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Lykidis,A. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (11-OCT-2005) US DOE Joint Genome Institute, 2400 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000151. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Jim Tiedje (tiedjej@pilot.msu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LLNL Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

22552 | 22664 | - | 113 | 78064658 | Bcep18194_AR0009 | - | 5S ribosomal RNA |

22796 | 25677 | - | 2882 | 78064658 | Bcep18194_AR0010 | - | 23S ribosomal RNA |

26071 | 27550 | - | 1480 | 78064658 | Bcep18194_AR0011 | - | 16S ribosomal RNA |

34991 | 35064 | + | 74 | 78064658 | Bcep18194_AR0012 | - | 13 Val tRNA
|

180109 | 180181 | + | 73 | 78064658 | Bcep18194_AR0013 | - | 11 Arg tRNA
|

252761 | 252833 | + | 73 | 78064658 | Bcep18194_AR0014 | - | 02 Ala tRNA
|

293394 | 294873 | + | 1480 | 78064658 | Bcep18194_AR0015 | - | 16S ribosomal RNA |

294937 | 295010 | + | 74 | 78064658 | Bcep18194_AR0016 | - | 14 Ile tRNA
|

295055 | 295127 | + | 73 | 78064658 | Bcep18194_AR0017 | - | 02 Ala tRNA
|

295424 | 298305 | + | 2882 | 78064658 | Bcep18194_AR0018 | - | 23S ribosomal RNA |

298437 | 298549 | + | 113 | 78064658 | Bcep18194_AR0019 | - | 5S ribosomal RNA |

300859 | 300941 | + | 83 | 78064658 | Bcep18194_AR0020 | - | 18 Tyr tRNA
|

300989 | 301059 | + | 71 | 78064658 | Bcep18194_AR0021 | - | 01 Gly tRNA
|

301087 | 301158 | + | 72 | 78064658 | Bcep18194_AR0022 | - | 12 Thr tRNA
|

302478 | 302550 | + | 73 | 78064658 | Bcep18194_AR0023 | - | 20 Trp tRNA
|

405712 | 405784 | + | 73 | 78064658 | Bcep18194_AR0024 | - | 12 Thr tRNA
|

507418 | 508897 | + | 1480 | 78064658 | Bcep18194_AR0025 | - | 16S ribosomal RNA |

508960 | 509033 | + | 74 | 78064658 | Bcep18194_AR0026 | - | 14 Ile tRNA
|

509078 | 509150 | + | 73 | 78064658 | Bcep18194_AR0027 | - | 02 Ala tRNA
|

509441 | 512322 | + | 2882 | 78064658 | Bcep18194_AR0028 | - | 23S ribosomal RNA |

512454 | 512566 | + | 113 | 78064658 | Bcep18194_AR0029 | - | 5S ribosomal RNA |

551819 | 551892 | - | 74 | 78064658 | Bcep18194_AR0030 | - | 03 Pro tRNA
|

659636 | 659982 | + | 347 | 78064658 | Bcep18194_AR0031 | - | RNA component of RNaseP |

804185 | 804258 | - | 74 | 78064658 | Bcep18194_AR0032 | - | 10 Lys tRNA
|

947456 | 947527 | - | 72 | 78064658 | Bcep18194_AR0033 | - | 01 Gly tRNA
|

1012109 | 1012196 | + | 88 | 78064658 | Bcep18194_AR0034 | - | 08 Ser tRNA
|

1031995 | 1032079 | - | 85 | 78064658 | Bcep18194_AR0035 | - | 08 Ser tRNA
|

1039408 | 1039481 | - | 74 | 78064658 | Bcep18194_AR0036 | - | 11 Arg tRNA
|

1039545 | 1039618 | - | 74 | 78064658 | Bcep18194_AR0037 | - | 11 Arg tRNA
|

1039689 | 1039762 | - | 74 | 78064658 | Bcep18194_AR0038 | - | 11 Arg tRNA
|

1053831 | 1053903 | - | 73 | 78064658 | Bcep18194_AR0039 | - | 12 Thr tRNA
|

1083647 | 1084016 | + | 370 | 78064658 | Bcep18194_AR0040 | - | tmRNA |

1146373 | 1146445 | - | 73 | 78064658 | Bcep18194_AR0041 | - | 07 Asn tRNA
|

1146524 | 1146596 | - | 73 | 78064658 | Bcep18194_AR0042 | - | 07 Asn tRNA
|

1192554 | 1192626 | + | 73 | 78064658 | Bcep18194_AR0043 | - | 01 Gly tRNA
|

1192683 | 1192755 | + | 73 | 78064658 | Bcep18194_AR0044 | - | 01 Gly tRNA
|

1192810 | 1192882 | + | 73 | 78064658 | Bcep18194_AR0045 | - | 01 Gly tRNA
|

1192986 | 1193056 | + | 71 | 78064658 | Bcep18194_AR0046 | - | 19 Cys tRNA
|

1413852 | 1413925 | - | 74 | 78064658 | Bcep18194_AR0047 | - | 03 Pro tRNA
|

1423235 | 1423308 | + | 74 | 78064658 | Bcep18194_AR0048 | - | 11 Arg tRNA
|

1597046 | 1597119 | + | 74 | 78064658 | Bcep18194_AR0049 | - | 13 Val tRNA
|

1609994 | 1610067 | + | 74 | 78064658 | Bcep18194_AR0050 | - | 03 Pro tRNA
|

1678842 | 1678925 | - | 84 | 78064658 | Bcep18194_AR0051 | - | 15 Leu tRNA
|

1679340 | 1679423 | - | 84 | 78064658 | Bcep18194_AR0052 | - | 15 Leu tRNA
|

1683057 | 1683140 | - | 84 | 78064658 | Bcep18194_AR0053 | - | 15 Leu tRNA
|

1695868 | 1695941 | - | 74 | 78064658 | Bcep18194_AR0054 | - | 16 Met tRNA
|

1704086 | 1704158 | + | 73 | 78064658 | Bcep18194_AR0055 | - | 09 His tRNA
|

2173126 | 2173228 | - | 103 | 78064658 | Bcep18194_AR0056 | - | SRP RNA; RNA component of signal recognition particle |

2275220 | 2275293 | - | 74 | 78064658 | Bcep18194_AR0057 | - | 06 Asp tRNA
|

2275320 | 2275392 | - | 73 | 78064658 | Bcep18194_AR0058 | - | 13 Val tRNA
|

2298099 | 2298182 | - | 84 | 78064658 | Bcep18194_AR0059 | - | 15 Leu tRNA
|

2425170 | 2425243 | - | 74 | 78064658 | Bcep18194_AR0060 | - | 06 Asp tRNA
|

2425320 | 2425392 | - | 73 | 78064658 | Bcep18194_AR0061 | - | 04 Glu tRNA
|

2425462 | 2425535 | - | 74 | 78064658 | Bcep18194_AR0062 | - | 06 Asp tRNA
|

2425617 | 2425689 | - | 73 | 78064658 | Bcep18194_AR0063 | - | 04 Glu tRNA
|

2425756 | 2425829 | - | 74 | 78064658 | Bcep18194_AR0064 | - | 06 Asp tRNA
|

2425912 | 2425984 | - | 73 | 78064658 | Bcep18194_AR0065 | - | 04 Glu tRNA
|

2426126 | 2426198 | - | 73 | 78064658 | Bcep18194_AR0066 | - | 02 Ala tRNA
|

2445364 | 2445454 | - | 91 | 78064658 | Bcep18194_AR0067 | - | 08 Ser tRNA
|

2531133 | 2531206 | - | 74 | 78064658 | Bcep18194_AR0068 | - | 16 Met tRNA
|

2555270 | 2555341 | + | 72 | 78064658 | Bcep18194_AR0069 | - | 13 Val tRNA
|

2609652 | 2609739 | + | 88 | 78064658 | Bcep18194_AR0070 | - | 08 Ser tRNA
|

2638876 | 2638988 | - | 113 | 78064658 | Bcep18194_AR0071 | - | 5S ribosomal RNA |

2639120 | 2642001 | - | 2882 | 78064658 | Bcep18194_AR0072 | - | 23S ribosomal RNA |

2642298 | 2642370 | - | 73 | 78064658 | Bcep18194_AR0073 | - | 02 Ala tRNA
|

2642415 | 2642488 | - | 74 | 78064658 | Bcep18194_AR0074 | - | 14 Ile tRNA
|

2642551 | 2644030 | - | 1480 | 78064658 | Bcep18194_AR0075 | - | 16S ribosomal RNA |

2675201 | 2675282 | - | 82 | 78064658 | Bcep18194_AR0076 | - | 15 Leu tRNA
|

2812939 | 2813010 | + | 72 | 78064658 | Bcep18194_AR0077 | - | 11 Arg tRNA
|

2818441 | 2818514 | + | 74 | 78064658 | Bcep18194_AR0078 | - | 16 Met tRNA
|

2923510 | 2923591 | + | 82 | 78064658 | Bcep18194_AR0079 | - | 15 Leu tRNA
|

3114495 | 3114568 | + | 74 | 78064658 | Bcep18194_AR0080 | - | 16 Met tRNA
|

3276156 | 3276229 | + | 74 | 78064658 | Bcep18194_AR0081 | - | 05 Gln tRNA
|

3638037 | 3638109 | - | 73 | 78064658 | Bcep18194_AR0082 | - | 17 Phe tRNA
|

3655607 | 3655679 | + | 73 | 78064658 | Bcep18194_AR0083 | - | 10 Lys tRNA
|