Материалы:NC 008146

LOCUS NC_008146 5705448 bp DNA circular BCT 13-JUN-2006 DEFINITION Mycobacterium sp. MCS, complete genome. ACCESSION NC_008146 VERSION NC_008146.1 GI:108796981 KEYWORDS . SOURCE Mycobacterium sp. MCS ORGANISM Mycobacterium sp. MCS Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Mycobacteriaceae; Mycobacterium. REFERENCE 1 (bases 1 to 5705448) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Martinez,M., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Miller,C.D., Hughes,J.E., Anderson,A.J., Sims,R.C. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome of Mycobacterium sp. MCS JOURNAL Unpublished REFERENCE 2 (bases 1 to 5705448) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (12-JUN-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5705448) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Martinez,M., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Miller,C.D., Hughes,J.E., Anderson,A.J., Sims,R.C. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (05-JUN-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000384. URL -- http://www.jgi.doe.gov JGI Project ID: 4000380 Source DNA and bacteria available from Charles Miller (cdmiller@biology.usu.edu) Contacts: Charles Miller (cdmiller@biology.usu.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

12992 | 13065 | + | 74 | 108796981 | Mmcs_R0001 | - | 14 Ile tRNA
|

13227 | 13299 | + | 73 | 108796981 | Mmcs_R0002 | - | 02 Ala tRNA
|

26655 | 26737 | + | 83 | 108796981 | Mmcs_R0003 | - | 15 Leu tRNA
|

477516 | 477589 | - | 74 | 108796981 | Mmcs_R0004 | - | 01 Gly tRNA
|

604137 | 604253 | + | 117 | 108796981 | Mmcs_R0005 | - | |

832510 | 832595 | + | 86 | 108796981 | Mmcs_R0006 | - | 18 Tyr tRNA
|

1015539 | 1015611 | + | 73 | 108796981 | Mmcs_R0007 | - | 12 Thr tRNA
|

1015643 | 1015716 | + | 74 | 108796981 | Mmcs_R0008 | - | 16 Met tRNA
|

1017559 | 1017634 | + | 76 | 108796981 | Mmcs_R0009 | - | 20 Trp tRNA
|

1540869 | 1540945 | + | 77 | 108796981 | Mmcs_R0010 | - | 16 Met tRNA
|

1752755 | 1753121 | + | 367 | 108796981 | Mmcs_R0011 | - | tmRNA |

1867112 | 1867184 | + | 73 | 108796981 | Mmcs_R0012 | - | 02 Ala tRNA
|

2065412 | 2065483 | + | 72 | 108796981 | Mmcs_R0013 | - | 05 Gln tRNA
|

2065546 | 2065618 | + | 73 | 108796981 | Mmcs_R0014 | - | 04 Glu tRNA
|

2366794 | 2366868 | - | 75 | 108796981 | Mmcs_R0015 | - | 13 Val tRNA
|

2366882 | 2366955 | - | 74 | 108796981 | Mmcs_R0016 | - | 19 Cys tRNA
|

2366979 | 2367054 | - | 76 | 108796981 | Mmcs_R0017 | - | 01 Gly tRNA
|

2367306 | 2367380 | + | 75 | 108796981 | Mmcs_R0018 | - | 13 Val tRNA
|

3007130 | 3007254 | - | 125 | 108796981 | Mmcs_R0019 | - | |

3007258 | 3007351 | - | 94 | 108796981 | Mmcs_R0020 | - | |

3080231 | 3080304 | - | 74 | 108796981 | Mmcs_R0021 | - | 03 Pro tRNA
|

3113186 | 3113299 | - | 114 | 108796981 | Mmcs_R0022 | - | 5S ribosomal RNA |

3113411 | 3116556 | - | 3146 | 108796981 | Mmcs_R0023 | - | 23S ribosomal RNA |

3116983 | 3118497 | - | 1515 | 108796981 | Mmcs_R0024 | - | 16S ribosomal RNA |

3169690 | 3169760 | - | 71 | 108796981 | Mmcs_R0025 | - | 19 Cys tRNA
|

3193256 | 3193332 | + | 77 | 108796981 | Mmcs_R0026 | - | 15 Leu tRNA
|

3355856 | 3355941 | + | 86 | 108796981 | Mmcs_R0027 | - | 15 Leu tRNA
|

3369759 | 3369838 | + | 80 | 108796981 | Mmcs_R0028 | - | 10 Lys tRNA
|

3536921 | 3537238 | - | 318 | 108796981 | Mmcs_R0029 | - | RNA component of RNaseP |

3559049 | 3559120 | - | 72 | 108796981 | Mmcs_R0030 | - | 13 Val tRNA
|

3635822 | 3635898 | - | 77 | 108796981 | Mmcs_R0031 | - | 16 Met tRNA
|

3651085 | 3651157 | - | 73 | 108796981 | Mmcs_R0032 | - | 07 Asn tRNA
|

3812406 | 3812482 | - | 77 | 108796981 | Mmcs_R0033 | - | 03 Pro tRNA
|

3812623 | 3812696 | + | 74 | 108796981 | Mmcs_R0034 | - | 01 Gly tRNA
|

3866285 | 3866357 | + | 73 | 108796981 | Mmcs_R0035 | - | 11 Arg tRNA
|

3886840 | 3886915 | + | 76 | 108796981 | Mmcs_R0036 | - | 09 His tRNA
|

3888350 | 3888425 | + | 76 | 108796981 | Mmcs_R0037 | - | 10 Lys tRNA
|

4085685 | 4085768 | - | 84 | 108796981 | Mmcs_R0038 | - | 15 Leu tRNA
|

4120121 | 4120234 | - | 114 | 108796981 | Mmcs_R0039 | - | 5S ribosomal RNA |

4120334 | 4123496 | - | 3163 | 108796981 | Mmcs_R0040 | - | 23S ribosomal RNA |

4123929 | 4125443 | - | 1515 | 108796981 | Mmcs_R0041 | - | 16S ribosomal RNA |

4152976 | 4153051 | + | 76 | 108796981 | Mmcs_R0042 | - | 11 Arg tRNA
|

4479495 | 4479568 | - | 74 | 108796981 | Mmcs_R0043 | - | 15 Leu tRNA
|

4514027 | 4514101 | + | 75 | 108796981 | Mmcs_R0044 | - | 05 Gln tRNA
|

4554754 | 4554826 | - | 73 | 108796981 | Mmcs_R0045 | - | 02 Ala tRNA
|

4656985 | 4657057 | + | 73 | 108796981 | Mmcs_R0046 | - | 11 Arg tRNA
|

4757559 | 4757743 | + | 185 | 108796981 | Mmcs_R0047 | - | |

4785219 | 4785295 | - | 77 | 108796981 | Mmcs_R0048 | - | 17 Phe tRNA
|

4785338 | 4785414 | - | 77 | 108796981 | Mmcs_R0049 | - | 06 Asp tRNA
|

4785448 | 4785520 | - | 73 | 108796981 | Mmcs_R0050 | - | 04 Glu tRNA
|

4785641 | 4785716 | + | 76 | 108796981 | Mmcs_R0051 | - | 10 Lys tRNA
|

4867059 | 4867133 | + | 75 | 108796981 | Mmcs_R0052 | - | 12 Thr tRNA
|

5075648 | 5075720 | - | 73 | 108796981 | Mmcs_R0053 | - | 12 Thr tRNA
|

5111635 | 5111708 | + | 74 | 108796981 | Mmcs_R0054 | - | 03 Pro tRNA
|

5201177 | 5201262 | + | 86 | 108796981 | Mmcs_R0055 | - | 08 Ser tRNA
|

5251756 | 5251846 | - | 91 | 108796981 | Mmcs_R0056 | - | 08 Ser tRNA
|

5269941 | 5270013 | - | 73 | 108796981 | Mmcs_R0057 | - | 11 Arg tRNA
|

5270052 | 5270143 | - | 92 | 108796981 | Mmcs_R0058 | - | 08 Ser tRNA
|

5273558 | 5273644 | - | 87 | 108796981 | Mmcs_R0059 | - | 08 Ser tRNA
|

5344256 | 5344359 | + | 104 | 108796981 | Mmcs_R0060 | - | |

5501874 | 5501968 | + | 95 | 108796981 | Mmcs_R0061 | - | Sec tRNA |