Материалы:NC 007947

LOCUS NC_007947 2971517 bp DNA circular BCT 03-MAY-2007 DEFINITION Methylobacillus flagellatus KT, complete genome. ACCESSION NC_007947 VERSION NC_007947.1 GI:91774356 KEYWORDS . SOURCE Methylobacillus flagellatus KT ORGANISM Methylobacillus flagellatus KT Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus. REFERENCE 1 (bases 1 to 2971517) AUTHORS Chistoserdova,L., Lapidus,A., Han,C., Goodwin,L., Saunders,L., Brettin,T., Tapia,R., Gilna,P., Lucas,S., Richardson,P.M. and Lidstrom,M.E. CONSRTM US DOE Joint Genome Institute TITLE The genome of Methylobacillus flagellatus, the molecular basis for obligate methylotrophy, and the polyphyletic origin of methylotrophy JOURNAL (er) J. Bacteriol. (2007) In press PUBMED 17416667 REFERENCE 2 (bases 1 to 2971517) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (11-APR-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2971517) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Brettin,T., Bruce,D., Han,C., Tapia,R., Saunders,E., Gilna,P., Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Anderson,I. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000284. URL -- http://www.jgi.doe.gov JGI Project ID: 3436091 Source DNA and bacteria available from Mary Lidstrom (lidstrom@u.washington.edu) Contacts: Mary Lidstrom (lidstrom@u.washington.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

12183 | 12258 | + | 76 | 91774356 | Mfla_R0001 | - | 04 Glu tRNA
|

64111 | 65576 | + | 1466 | 91774356 | Mfla_R0002 | - | 16S ribosomal RNA |

65726 | 65802 | + | 77 | 91774356 | Mfla_R0003 | - | 14 Ile tRNA
|

65899 | 65974 | + | 76 | 91774356 | Mfla_R0004 | - | 02 Ala tRNA
|

66261 | 69144 | + | 2884 | 91774356 | Mfla_R0005 | - | 23S ribosomal RNA |

69291 | 69404 | + | 114 | 91774356 | Mfla_R0006 | - | 5S ribosomal RNA |

79967 | 80043 | + | 77 | 91774356 | Mfla_R0007 | - | 03 Pro tRNA
|

80072 | 80148 | + | 77 | 91774356 | Mfla_R0008 | - | 11 Arg tRNA
|

80180 | 80255 | + | 76 | 91774356 | Mfla_R0009 | - | 09 His tRNA
|

107330 | 107405 | - | 76 | 91774356 | Mfla_R0010 | - | 17 Phe tRNA
|

121288 | 121499 | - | 212 | 91774356 | Mfla_R0011 | - | |

134479 | 134699 | - | 221 | 91774356 | Mfla_R0012 | - | |

269603 | 269678 | + | 76 | 91774356 | Mfla_R0013 | - | 12 Thr tRNA
|

269738 | 269822 | + | 85 | 91774356 | Mfla_R0014 | - | 18 Tyr tRNA
|

269864 | 269939 | + | 76 | 91774356 | Mfla_R0015 | - | 01 Gly tRNA
|

269966 | 270040 | + | 75 | 91774356 | Mfla_R0016 | - | 12 Thr tRNA
|

271351 | 271426 | + | 76 | 91774356 | Mfla_R0017 | - | 20 Trp tRNA
|

430370 | 430454 | + | 85 | 91774356 | Mfla_R0018 | - | 15 Leu tRNA
|

480115 | 480191 | - | 77 | 91774356 | Mfla_R0019 | - | 11 Arg tRNA
|

544978 | 545053 | + | 76 | 91774356 | Mfla_R0020 | - | 10 Lys tRNA
|

590196 | 590272 | - | 77 | 91774356 | Mfla_R0021 | - | 11 Arg tRNA
|

590353 | 590446 | - | 94 | 91774356 | Mfla_R0022 | - | 08 Ser tRNA
|

701255 | 701331 | - | 77 | 91774356 | Mfla_R0023 | - | 16 Met tRNA
|

708543 | 708619 | - | 77 | 91774356 | Mfla_R0024 | - | 05 Gln tRNA
|

1181020 | 1181110 | - | 91 | 91774356 | Mfla_R0025 | - | 08 Ser tRNA
|

1198789 | 1199149 | + | 361 | 91774356 | Mfla_R0026 | - | tmRNA |

1235852 | 1235927 | + | 76 | 91774356 | Mfla_R0027 | - | 13 Val tRNA
|

1235987 | 1236063 | + | 77 | 91774356 | Mfla_R0028 | - | 06 Asp tRNA
|

1247894 | 1247968 | - | 75 | 91774356 | Mfla_R0029 | - | 11 Arg tRNA
|

1286474 | 1286697 | + | 224 | 91774356 | Mfla_R0030 | - | |

1394309 | 1394394 | - | 86 | 91774356 | Mfla_R0031 | - | 15 Leu tRNA
|

1415387 | 1415476 | + | 90 | 91774356 | Mfla_R0032 | - | 08 Ser tRNA
|

1456183 | 1456294 | - | 112 | 91774356 | Mfla_R0033 | - | |

1498590 | 1498665 | - | 76 | 91774356 | Mfla_R0034 | - | 04 Glu tRNA
|

1498707 | 1498782 | - | 76 | 91774356 | Mfla_R0035 | - | 02 Ala tRNA
|

1520423 | 1520498 | + | 76 | 91774356 | Mfla_R0036 | - | 13 Val tRNA
|

1520548 | 1520624 | + | 77 | 91774356 | Mfla_R0037 | - | 06 Asp tRNA
|

1574678 | 1574765 | - | 88 | 91774356 | Mfla_R0038 | - | 08 Ser tRNA
|

1662861 | 1662936 | + | 76 | 91774356 | Mfla_R0039 | - | 07 Asn tRNA
|

1685091 | 1685191 | + | 101 | 91774356 | Mfla_R0040 | - | SRP RNA; RNA component of signal recognition particle |

1741989 | 1742075 | + | 87 | 91774356 | Mfla_R0041 | - | 15 Leu tRNA
|

1742982 | 1743066 | + | 85 | 91774356 | Mfla_R0042 | - | 15 Leu tRNA
|

1921493 | 1921603 | - | 111 | 91774356 | Mfla_R0043 | - | |

1921794 | 1921897 | + | 104 | 91774356 | Mfla_R0044 | - | |

1943494 | 1943569 | - | 76 | 91774356 | Mfla_R0045 | - | 01 Gly tRNA
|

1943596 | 1943669 | - | 74 | 91774356 | Mfla_R0046 | - | 19 Cys tRNA
|

1943747 | 1943822 | - | 76 | 91774356 | Mfla_R0047 | - | 01 Gly tRNA
|

2064401 | 2064476 | + | 76 | 91774356 | Mfla_R0048 | - | 10 Lys tRNA
|

2130253 | 2130351 | + | 99 | 91774356 | Mfla_R0049 | - | |

2135008 | 2135084 | - | 77 | 91774356 | Mfla_R0050 | - | 03 Pro tRNA
|

2173136 | 2173212 | - | 77 | 91774356 | Mfla_R0051 | - | 13 Val tRNA
|

2203957 | 2204041 | - | 85 | 91774356 | Mfla_R0052 | - | 15 Leu tRNA
|

2229585 | 2229698 | - | 114 | 91774356 | Mfla_R0053 | - | 5S ribosomal RNA |

2229845 | 2232728 | - | 2884 | 91774356 | Mfla_R0054 | - | 23S ribosomal RNA |

2233015 | 2233090 | - | 76 | 91774356 | Mfla_R0055 | - | 02 Ala tRNA
|

2233187 | 2233263 | - | 77 | 91774356 | Mfla_R0056 | - | 14 Ile tRNA
|

2233413 | 2234878 | - | 1466 | 91774356 | Mfla_R0057 | - | 16S ribosomal RNA |

2235291 | 2235367 | - | 77 | 91774356 | Mfla_R0058 | - | 16 Met tRNA
|

2433350 | 2433600 | - | 251 | 91774356 | Mfla_R0059 | - | RNA component of RNaseP |

2479094 | 2479172 | - | 79 | 91774356 | Mfla_R0060 | - | 16 Met tRNA
|

2531581 | 2531656 | - | 76 | 91774356 | Mfla_R0061 | - | 12 Thr tRNA
|

2714533 | 2714643 | - | 111 | 91774356 | Mfla_R0062 | - | |

2861839 | 2861912 | + | 74 | 91774356 | Mfla_R0063 | - | 01 Gly tRNA
|