Материалы:NC 007677

LOCUS NC_007677 3551823 bp DNA circular BCT 30-MAR-2006 DEFINITION Salinibacter ruber DSM 13855, complete genome. ACCESSION NC_007677 VERSION NC_007677.1 GI:83814055 KEYWORDS . SOURCE Salinibacter ruber DSM 13855 ORGANISM Salinibacter ruber DSM 13855 Bacteria; Bacteroidetes; Sphingobacteria; Sphingobacteriales; Sphingobacteriales genera incertae sedis; Salinibacter. REFERENCE 1 (bases 1 to 3551823) AUTHORS Mongodin,E.F., Nelson,K.E., Daugherty,S., Deboy,R.T., Wister,J., Khouri,H., Weidman,J., Walsh,D.A., Papke,R.T., Sanchez Perez,G., Sharma,A.K., Nesbo,C.L., Macleod,D., Bapteste,E., Doolittle,W.F., Charlebois,R.L., Legault,B. and Rodriguez-Valera,F. TITLE The genome of Salinibacter ruber: Convergence and gene exchange among hyperhalophilic bacteria and archaea JOURNAL Proc. Natl. Acad. Sci. U.S.A. 102 (50), 18147-18152 (2005) PUBMED 16330755 REFERENCE 2 (bases 1 to 3551823) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-DEC-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3551823) AUTHORS Mongodin,E.F., Nelson,K.E., Daugherty,S.C., DeBoy,R.T., Wister,J., Khouri,H.M., Weidman,J., Walsh,D.A., Papke,R.T., Sanchez Perrez,G., Sharma,A.K., Nesbo,C.L., MacLeod,D., Bapteste,E., Doolittle,W.F., Charlebois,R.L., Legault,B. and Rodriguez-Valera,F. TITLE Direct Submission JOURNAL Submitted (10-NOV-2005) The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD 20850, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000159. COMPLETENESS: full length. Salinibacter ruber strain M31T DSM13855 was obtained from the DSMZ (German Collection of Microorganisms and Cell Cultures) culture collection at http://www.dsmz.de/microorganisms/html/strains/strain.dsm013855.htm l . The S. ruber growth medium is described at http://www.dsmz.de/microorganisms/html/media/medium000936.html (DSMZ medium 936).



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

22670 | 22743 | + | 74 | 83814055 | SRU_0024 | - | 03 Pro tRNA
|

23159 | 23232 | + | 74 | 83814055 | SRU_0025 | - | 19 Cys tRNA
|

30547 | 30638 | - | 92 | 83814055 | SRU_0032 | - | 08 Ser tRNA
|

49204 | 49277 | - | 74 | 83814055 | SRU_0051 | - | 13 Val tRNA
|

49371 | 49445 | - | 75 | 83814055 | SRU_0052 | - | 01 Gly tRNA
|

520184 | 520260 | - | 77 | 83814055 | SRU_0379 | - | 16 Met tRNA
|

674818 | 674894 | + | 77 | 83814055 | SRU_0500 | - | 13 Val tRNA
|

993196 | 993273 | + | 78 | 83814055 | SRU_0782 | - | 11 Arg tRNA
|

1038615 | 1038688 | - | 74 | 83814055 | SRU_0816 | - | 05 Gln tRNA
|

1099418 | 1099494 | - | 77 | 83814055 | SRU_0856 | - | 16 Met tRNA
|

1174276 | 1174368 | + | 93 | 83814055 | SRU_0917 | - | 08 Ser tRNA
|

1216255 | 1216327 | + | 73 | 83814055 | SRU_0949 | - | 11 Arg tRNA
|

1342564 | 1342640 | + | 77 | 83814055 | SRU_1069 | - | 09 His tRNA
|

1342677 | 1342754 | + | 78 | 83814055 | SRU_1070 | - | 04 Glu tRNA
|

1352109 | 1352181 | + | 73 | 83814055 | SRU_1082 | - | 02 Ala tRNA
|

1401828 | 1402196 | - | 369 | 83814055 | SRU_1111 | - | sRNA |

1490273 | 1490345 | + | 73 | 83814055 | SRU_1180 | - | 02 Ala tRNA
|

1555130 | 1555203 | + | 74 | 83814055 | SRU_1238 | - | 11 Arg tRNA
|

1852407 | 1852483 | + | 77 | 83814055 | SRU_1485 | - | 10 Lys tRNA
|

1894048 | 1894121 | - | 74 | 83814055 | SRU_1522 | - | 03 Pro tRNA
|

1922925 | 1923016 | - | 92 | 83814055 | SRU_1543 | - | 08 Ser tRNA
|

2003871 | 2003946 | + | 76 | 83814055 | SRU_1610 | - | 17 Phe tRNA
|

2049656 | 2049731 | - | 76 | 83814055 | SRU_1649 | - | 12 Thr tRNA
|

2126357 | 2126430 | + | 74 | 83814055 | SRU_1717 | - | 11 Arg tRNA
|

2181297 | 2181372 | - | 76 | 83814055 | SRU_1765 | - | 20 Trp tRNA
|

2247305 | 2247376 | - | 72 | 83814055 | SRU_1813 | - | 16 Met tRNA
|

2247492 | 2247566 | - | 75 | 83814055 | SRU_1814 | - | 12 Thr tRNA
|

2247586 | 2247657 | - | 72 | 83814055 | SRU_1815 | - | 01 Gly tRNA
|

2247719 | 2247804 | - | 86 | 83814055 | SRU_1816 | - | 18 Tyr tRNA
|

2271497 | 2271572 | - | 76 | 83814055 | SRU_1836 | - | 01 Gly tRNA
|

2325181 | 2325269 | + | 89 | 83814055 | SRU_1883 | - | 15 Leu tRNA
|

2342889 | 2342963 | - | 75 | 83814055 | SRU_1897 | - | 06 Asp tRNA
|

2460376 | 2460463 | + | 88 | 83814055 | SRU_1989 | - | 15 Leu tRNA
|

2517508 | 2517592 | - | 85 | 83814055 | SRU_2033 | - | 15 Leu tRNA
|

2520028 | 2520102 | + | 75 | 83814055 | SRU_2035 | - | 07 Asn tRNA
|

2865704 | 2865779 | - | 76 | 83814055 | SRU_2300 | - | 05 Gln tRNA
|

2877352 | 2877425 | + | 74 | 83814055 | SRU_2310 | - | 10 Lys tRNA
|

2877516 | 2877604 | + | 89 | 83814055 | SRU_2311 | - | 15 Leu tRNA
|

2958346 | 2958422 | - | 77 | 83814055 | SRU_2379 | - | 03 Pro tRNA
|

3075011 | 3075083 | - | 73 | 83814055 | SRU_2472 | - | 12 Thr tRNA
|

3313684 | 3313756 | - | 73 | 83814055 | SRU_2675 | - | 04 Glu tRNA
|

3324764 | 3324873 | - | 110 | 83814055 | SRU_2687 | - | 5S ribosomal RNA |

3325001 | 3327939 | - | 2939 | 83814055 | SRU_2688 | - | 23S ribosomal RNA |

3328157 | 3328232 | - | 76 | 83814055 | SRU_2689 | - | 02 Ala tRNA
|

3328246 | 3328320 | - | 75 | 83814055 | SRU_2690 | - | 14 Ile tRNA
|

3328508 | 3330049 | - | 1542 | 83814055 | SRU_2691 | - | 16S ribosomal RNA |

3458760 | 3458833 | + | 74 | 83814055 | SRU_2801 | - | 13 Val tRNA
|

3536874 | 3536960 | - | 87 | 83814055 | SRU_2857 | - | 08 Ser tRNA
|