Материалы:NC 008261

```
LOCUS NC_008261 3256683 bp DNA circular BCT 14-AUG-2007
DEFINITION Clostridium perfringens ATCC 13124, complete genome.
ACCESSION NC_008261
VERSION NC_008261.1 GI:110798562
KEYWORDS .
SOURCE Clostridium perfringens ATCC 13124
ORGANISM Clostridium perfringens ATCC 13124
Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Clostridium.
REFERENCE 1 (bases 1 to 3256683)
AUTHORS Myers,G.S., Rasko,D.A., Cheung,J.K., Ravel,J., Seshadri,R.,
DeBoy,R.T., Ren,Q., Varga,J., Awad,M.M., Brinkac,L.M.,
Daugherty,S.C., Haft,D.H., Dodson,R.J., Madupu,R., Nelson,W.C.,
Rosovitz,M.J., Sullivan,S.A., Khouri,H., Dimitrov,G.I.,
Watkins,K.L., Mulligan,S., Benton,J., Radune,D., Fisher,D.J.,
Atkins,H.S., Hiscox,T., Jost,B.H., Billington,S.J., Songer,J.G.,
McClane,B.A., Titball,R.W., Rood,J.I., Melville,S.B. and
Paulsen,I.T.
TITLE Skewed genomic variability in strains of the toxigenic bacterial
pathogen, Clostridium perfringens
JOURNAL Genome Res. 16 (8), 1031-1040 (2006)
PUBMED 16825665
REFERENCE 2 (bases 1 to 3256683)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (28-JUL-2006) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 3256683)
AUTHORS Myers,G.S., Rasko,D.A., Cheung,J.K., Ravel,J., Seshadri,R.,
DeBoy,R.T., Ren,Q., Varga,J., Awad,M.M., Brinkac,L.M.,
Daugherty,S.C., Haft,D.H., Dodson,R.J., Madupu,R., Nelson,W.C.,
Rosovitz,M., Sullivan,S.A., Khouri,H.M., Dimitrov,G., Watkins,K.L.,
Mulligan,S., Benton,J.L., Fisher,D.J., Atkins,H.S., Hiscox,T.,
Titball,R.W., Rood,J.I., Melville,S. and Paulsen,I.T.
TITLE Direct Submission
JOURNAL Submitted (20-JAN-2006) The Institute for Genomic Research, 9712
Medical Center Dr, Rockville, MD 20850, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000246.
COMPLETENESS: full length.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

10167 | 11688 | + | 1522 | 110798562 | CPF_2998 | - | 16S ribosomal RNA |

11869 | 14777 | + | 2909 | 110798562 | CPF_2999 | - | 23S ribosomal RNA |

14869 | 14996 | + | 128 | 110798562 | CPF_3000 | - | 5S ribosomal RNA |

14992 | 15068 | + | 77 | 110798562 | CPF_0008 | - | 16 Met tRNA
|

15074 | 15149 | + | 76 | 110798562 | CPF_0009 | - | 02 Ala tRNA
|

23280 | 23370 | + | 91 | 110798562 | CPF_0016 | - | 08 Ser tRNA
|

23404 | 23494 | + | 91 | 110798562 | CPF_0017 | - | 08 Ser tRNA
|

24130 | 24220 | + | 91 | 110798562 | CPF_0019 | - | 08 Ser tRNA
|

24226 | 24316 | + | 91 | 110798562 | CPF_0020 | - | 08 Ser tRNA
|

39585 | 39661 | + | 77 | 110798562 | CPF_0031 | - | 11 Arg tRNA
|

42757 | 42831 | + | 75 | 110798562 | CPF_0035 | - | 11 Arg tRNA
|

54210 | 54299 | + | 90 | 110798562 | CPF_0048 | - | 08 Ser tRNA
|

72550 | 74066 | + | 1517 | 110798562 | CPF_3001 | - | 16S ribosomal RNA |

74252 | 77159 | + | 2908 | 110798562 | CPF_3002 | - | 23S ribosomal RNA |

77208 | 77334 | + | 127 | 110798562 | CPF_3003 | - | 5S ribosomal RNA |

77330 | 77405 | + | 76 | 110798562 | CPF_0068 | - | 10 Lys tRNA
|

82381 | 83902 | + | 1522 | 110798562 | CPF_3004 | - | 16S ribosomal RNA |

84083 | 86990 | + | 2908 | 110798562 | CPF_3005 | - | 23S ribosomal RNA |

87039 | 87165 | + | 127 | 110798562 | CPF_3006 | - | 5S ribosomal RNA |

87165 | 87239 | + | 75 | 110798562 | CPF_0073 | - | 07 Asn tRNA
|

231432 | 232953 | + | 1522 | 110798562 | CPF_3007 | - | 16S ribosomal RNA |

233134 | 236041 | + | 2908 | 110798562 | CPF_3008 | - | 23S ribosomal RNA |

236091 | 236217 | + | 127 | 110798562 | CPF_3009 | - | 5S ribosomal RNA |

236219 | 236294 | + | 76 | 110798562 | CPF_0193 | - | 17 Phe tRNA
|

279286 | 279361 | - | 76 | 110798562 | CPF_0229 | - | 16 Met tRNA
|

310698 | 312219 | + | 1522 | 110798562 | CPF_3010 | - | 16S ribosomal RNA |

312400 | 315307 | + | 2908 | 110798562 | CPF_3011 | - | 23S ribosomal RNA |

315357 | 315483 | + | 127 | 110798562 | CPF_3012 | - | 5S ribosomal RNA |

315485 | 315560 | + | 76 | 110798562 | CPF_0260 | - | 17 Phe tRNA
|

328323 | 328398 | - | 76 | 110798562 | CPF_0272 | - | 03 Pro tRNA
|

580328 | 580403 | + | 76 | 110798562 | CPF_0489 | - | 16 Met tRNA
|

683148 | 684669 | + | 1522 | 110798562 | CPF_3013 | - | 16S ribosomal RNA |

684850 | 687757 | + | 2908 | 110798562 | CPF_3014 | - | 23S ribosomal RNA |

687807 | 687933 | + | 127 | 110798562 | CPF_3015 | - | 5S ribosomal RNA |

687930 | 688004 | + | 75 | 110798562 | CPF_0573 | - | 04 Glu tRNA
|

810869 | 810957 | - | 89 | 110798562 | CPF_0679 | - | 15 Leu tRNA
|

1098850 | 1098933 | - | 84 | 110798562 | CPF_0944 | - | 01 Gly tRNA
|

1099769 | 1099843 | + | 75 | 110798562 | CPF_0946 | - | 20 Trp tRNA
|

1708703 | 1709063 | - | 361 | 110798562 | CPF_3016 | - | 10Sa RNA (tmRNA) |

1850167 | 1850253 | - | 87 | 110798562 | CPF_1633 | - | 15 Leu tRNA
|

2351711 | 2351801 | + | 91 | 110798562 | CPF_2120 | - | Sec tRNA |

2394610 | 2394684 | - | 75 | 110798562 | CPF_2153 | - | 19 Cys tRNA
|

2394690 | 2394763 | - | 74 | 110798562 | CPF_2154 | - | 01 Gly tRNA
|

2394767 | 2394841 | - | 75 | 110798562 | CPF_2155 | - | 01 Gly tRNA
|

2394847 | 2394922 | - | 76 | 110798562 | CPF_2156 | - | 17 Phe tRNA
|

2494499 | 2494584 | - | 86 | 110798562 | CPF_2246 | - | 15 Leu tRNA
|

2694346 | 2694421 | - | 76 | 110798562 | CPF_2419 | - | 20 Trp tRNA
|

2694450 | 2694525 | - | 76 | 110798562 | CPF_2420 | - | 20 Trp tRNA
|

2714178 | 2714263 | - | 86 | 110798562 | CPF_2436 | - | 18 Tyr tRNA
|

2714269 | 2714344 | - | 76 | 110798562 | CPF_2437 | - | 12 Thr tRNA
|

2714370 | 2714455 | - | 86 | 110798562 | CPF_2438 | - | 18 Tyr tRNA
|

2714461 | 2714536 | - | 76 | 110798562 | CPF_2439 | - | 12 Thr tRNA
|

2714555 | 2714630 | - | 76 | 110798562 | CPF_2440 | - | 13 Val tRNA
|

2714635 | 2714720 | - | 86 | 110798562 | CPF_2441 | - | 18 Tyr tRNA
|

2714726 | 2714801 | - | 76 | 110798562 | CPF_2442 | - | 12 Thr tRNA
|

2778383 | 2778457 | - | 75 | 110798562 | CPF_2505 | - | 07 Asn tRNA
|

2778510 | 2781417 | - | 2908 | 110798562 | CPF_3017 | - | 23S ribosomal RNA |

2781517 | 2781593 | - | 77 | 110798562 | CPF_2506 | - | 14 Ile tRNA
|

2781599 | 2781674 | - | 76 | 110798562 | CPF_2507 | - | 02 Ala tRNA
|

2781831 | 2783352 | - | 1522 | 110798562 | CPF_3018 | - | 16S ribosomal RNA |

2788043 | 2788119 | - | 77 | 110798562 | CPF_2513 | - | 11 Arg tRNA
|

2788170 | 2788243 | - | 74 | 110798562 | CPF_2514 | - | 01 Gly tRNA
|

2788247 | 2788321 | - | 75 | 110798562 | CPF_2515 | - | 01 Gly tRNA
|

2788345 | 2788428 | - | 84 | 110798562 | CPF_2516 | - | 15 Leu tRNA
|

2788439 | 2788514 | - | 76 | 110798562 | CPF_2517 | - | 10 Lys tRNA
|

2788522 | 2788596 | - | 75 | 110798562 | CPF_2518 | - | 05 Gln tRNA
|

2788602 | 2788677 | - | 76 | 110798562 | CPF_2519 | - | 09 His tRNA
|

2788682 | 2788758 | - | 77 | 110798562 | CPF_2520 | - | 11 Arg tRNA
|

2788794 | 2788867 | - | 74 | 110798562 | CPF_2521 | - | 01 Gly tRNA
|

2788872 | 2788947 | - | 76 | 110798562 | CPF_2522 | - | 03 Pro tRNA
|

2788953 | 2789029 | - | 77 | 110798562 | CPF_2523 | - | 11 Arg tRNA
|

2789105 | 2789178 | - | 74 | 110798562 | CPF_2524 | - | 01 Gly tRNA
|

2789183 | 2789257 | - | 75 | 110798562 | CPF_2525 | - | 01 Gly tRNA
|

2789284 | 2789367 | - | 84 | 110798562 | CPF_2526 | - | 15 Leu tRNA
|

2789378 | 2789453 | - | 76 | 110798562 | CPF_2527 | - | 10 Lys tRNA
|

2789473 | 2789548 | - | 76 | 110798562 | CPF_2528 | - | 10 Lys tRNA
|

2789555 | 2789629 | - | 75 | 110798562 | CPF_2529 | - | 05 Gln tRNA
|

2789633 | 2789708 | - | 76 | 110798562 | CPF_2530 | - | 09 His tRNA
|

2789713 | 2789789 | - | 77 | 110798562 | CPF_2531 | - | 11 Arg tRNA
|

2789869 | 2789942 | - | 74 | 110798562 | CPF_2532 | - | 01 Gly tRNA
|

2789947 | 2790022 | - | 76 | 110798562 | CPF_2533 | - | 03 Pro tRNA
|

2888912 | 2888987 | - | 76 | 110798562 | CPF_2619 | - | 10 Lys tRNA
|

2889032 | 2889105 | - | 74 | 110798562 | CPF_2620 | - | 01 Gly tRNA
|

2889171 | 2889245 | - | 75 | 110798562 | CPF_2621 | - | 05 Gln tRNA
|

2889249 | 2889325 | - | 77 | 110798562 | CPF_2622 | - | 11 Arg tRNA
|

2892507 | 2892582 | - | 76 | 110798562 | CPF_2626 | - | 10 Lys tRNA
|

2892601 | 2892674 | - | 74 | 110798562 | CPF_2627 | - | 01 Gly tRNA
|

2892680 | 2892754 | - | 75 | 110798562 | CPF_2628 | - | 01 Gly tRNA
|

2892772 | 2892845 | - | 74 | 110798562 | CPF_2629 | - | 01 Gly tRNA
|

2892851 | 2892934 | - | 84 | 110798562 | CPF_2630 | - | 15 Leu tRNA
|

2993234 | 2993309 | - | 76 | 110798562 | CPF_2731 | - | 12 Thr tRNA
|

3027823 | 3027897 | - | 75 | 110798562 | CPF_2769 | - | 19 Cys tRNA
|

3027902 | 3027977 | - | 76 | 110798562 | CPF_2770 | - | 17 Phe tRNA
|

3029037 | 3029158 | - | 122 | 110798562 | CPF_2770a | - | 5S ribosomal RNA |

3029161 | 3029235 | - | 75 | 110798562 | CPF_2771 | - | 07 Asn tRNA
|

3029234 | 3029360 | - | 127 | 110798562 | CPF_3019 | - | 5S ribosomal RNA |

3029408 | 3032314 | - | 2907 | 110798562 | CPF_3020 | - | 23S ribosomal RNA |

3032414 | 3032490 | - | 77 | 110798562 | CPF_2772 | - | 14 Ile tRNA
|

3032496 | 3032571 | - | 76 | 110798562 | CPF_2773 | - | 02 Ala tRNA
|

3032728 | 3034249 | - | 1522 | 110798562 | CPF_3021 | - | 16S ribosomal RNA |

3043265 | 3043339 | - | 75 | 110798562 | CPF_2780 | - | 07 Asn tRNA
|

3056396 | 3056484 | - | 89 | 110798562 | CPF_2790 | - | 15 Leu tRNA
|

3056501 | 3056577 | - | 77 | 110798562 | CPF_2791 | - | 16 Met tRNA
|

3056581 | 3056656 | - | 76 | 110798562 | CPF_2792 | - | 16 Met tRNA
|

3056664 | 3056752 | - | 89 | 110798562 | CPF_2793 | - | 15 Leu tRNA
|

3056769 | 3056845 | - | 77 | 110798562 | CPF_2794 | - | 16 Met tRNA
|

3056849 | 3056924 | - | 76 | 110798562 | CPF_2795 | - | 16 Met tRNA
|

3056931 | 3057019 | - | 89 | 110798562 | CPF_2796 | - | 15 Leu tRNA
|

3215484 | 3215559 | - | 76 | 110798562 | CPF_2941 | - | 12 Thr tRNA
|

3215563 | 3215639 | - | 77 | 110798562 | CPF_2942 | - | 06 Asp tRNA
|

3215651 | 3215726 | - | 76 | 110798562 | CPF_2943 | - | 13 Val tRNA
|

3215734 | 3215808 | - | 75 | 110798562 | CPF_2944 | - | 04 Glu tRNA
|

3215814 | 3215890 | - | 77 | 110798562 | CPF_2945 | - | 06 Asp tRNA
|

3215905 | 3215980 | - | 76 | 110798562 | CPF_2946 | - | 13 Val tRNA
|

3215987 | 3216061 | - | 75 | 110798562 | CPF_2947 | - | 04 Glu tRNA
|

3216069 | 3216145 | - | 77 | 110798562 | CPF_2948 | - | 06 Asp tRNA
|

3216159 | 3216234 | - | 76 | 110798562 | CPF_2949 | - | 13 Val tRNA
|

3216239 | 3216313 | - | 75 | 110798562 | CPF_2950 | - | 04 Glu tRNA
|