Материалы:NC 008344

LOCUS NC_008344 2661057 bp DNA circular BCT 21-MAY-2007 DEFINITION Nitrosomonas eutropha C91, complete genome. ACCESSION NC_008344 VERSION NC_008344.1 GI:114330036 KEYWORDS . SOURCE Nitrosomonas eutropha C91 ORGANISM Nitrosomonas eutropha C91 Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas. REFERENCE 1 (bases 1 to 2661057) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Pitluck,S., Di Bartolo,G., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Arp,D., Klotz,M., Norton,J., Stein,L., Sayavedra-Soto,L., Hommes,N. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of the choromosome of Nitrosomonas eutropha C91 JOURNAL Unpublished REFERENCE 2 (bases 1 to 2661057) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (14-SEP-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2661057) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Pitluck,S., Di Bartolo,G., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Arp,D., Klotz,M., Norton,J., Stein,L., Sayavedra-Soto,L., Hommes,N. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (25-AUG-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000450. URL -- http://www.jgi.doe.gov JGI Project ID: 3634486 Source DNA and bacteria available from Dan Arp (arpd@bcc.orst.edu) Contacts: Dan Arp (arpd@bcc.orst.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length.



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

6613 | 6688 | + | 76 | 114330036 | Neut_R0001 | - | 01 Gly tRNA
|

123441 | 123514 | + | 74 | 114330036 | Neut_R0002 | - | 19 Cys tRNA
|

123540 | 123628 | + | 89 | 114330036 | Neut_R0003 | - | 15 Leu tRNA
|

210148 | 210233 | - | 86 | 114330036 | Neut_R0004 | - | 15 Leu tRNA
|

231716 | 233245 | + | 1530 | 114330036 | Neut_R0005 | - | 16S ribosomal RNA |

233340 | 233416 | + | 77 | 114330036 | Neut_R0006 | - | 14 Ile tRNA
|

233419 | 233494 | + | 76 | 114330036 | Neut_R0007 | - | 02 Ala tRNA
|

233643 | 236526 | + | 2884 | 114330036 | Neut_R0008 | - | 23S ribosomal RNA |

236593 | 236705 | + | 113 | 114330036 | Neut_R0009 | - | 5S ribosomal RNA |

309741 | 309817 | + | 77 | 114330036 | Neut_R0010 | - | 16 Met tRNA
|

330649 | 330719 | + | 71 | 114330036 | Neut_R0011 | - | 01 Gly tRNA
|

391066 | 391141 | - | 76 | 114330036 | Neut_R0012 | - | 04 Glu tRNA
|

391167 | 391242 | - | 76 | 114330036 | Neut_R0013 | - | 02 Ala tRNA
|

594166 | 594241 | + | 76 | 114330036 | Neut_R0014 | - | 12 Thr tRNA
|

597363 | 597467 | - | 105 | 114330036 | Neut_R0015 | - | SRP RNA; RNA component of signal recognition particle |

625149 | 625225 | + | 77 | 114330036 | Neut_R0016 | - | 13 Val tRNA
|

669807 | 669882 | + | 76 | 114330036 | Neut_R0017 | - | 13 Val tRNA
|

669942 | 670018 | + | 77 | 114330036 | Neut_R0018 | - | 06 Asp tRNA
|

841072 | 841148 | - | 77 | 114330036 | Neut_R0019 | - | 03 Pro tRNA
|

948549 | 948633 | + | 85 | 114330036 | Neut_R0020 | - | 15 Leu tRNA
|

972317 | 972392 | - | 76 | 114330036 | Neut_R0021 | - | 10 Lys tRNA
|

1155347 | 1155422 | + | 76 | 114330036 | Neut_R0022 | - | 12 Thr tRNA
|

1165765 | 1165855 | - | 91 | 114330036 | Neut_R0023 | - | 08 Ser tRNA
|

1179145 | 1179219 | + | 75 | 114330036 | Neut_R0024 | - | 05 Gln tRNA
|

1286397 | 1286472 | - | 76 | 114330036 | Neut_R0025 | - | 11 Arg tRNA
|

1329101 | 1329176 | - | 76 | 114330036 | Neut_R0026 | - | 09 His tRNA
|

1329228 | 1329304 | - | 77 | 114330036 | Neut_R0027 | - | 11 Arg tRNA
|

1329349 | 1329425 | - | 77 | 114330036 | Neut_R0028 | - | 03 Pro tRNA
|

1531916 | 1531992 | + | 77 | 114330036 | Neut_R0029 | - | 16 Met tRNA
|

1569828 | 1569903 | - | 76 | 114330036 | Neut_R0030 | - | 07 Asn tRNA
|

1654953 | 1655040 | - | 88 | 114330036 | Neut_R0031 | - | 08 Ser tRNA
|

1680127 | 1680213 | - | 87 | 114330036 | Neut_R0032 | - | 15 Leu tRNA
|

1702900 | 1702984 | + | 85 | 114330036 | Neut_R0033 | - | 15 Leu tRNA
|

1716702 | 1716777 | + | 76 | 114330036 | Neut_R0034 | - | 16 Met tRNA
|

1770642 | 1770717 | - | 76 | 114330036 | Neut_R0035 | - | 11 Arg tRNA
|

1856062 | 1856154 | + | 93 | 114330036 | Neut_R0036 | - | 08 Ser tRNA
|

1862463 | 1862537 | + | 75 | 114330036 | Neut_R0037 | - | 13 Val tRNA
|

1911730 | 1911805 | - | 76 | 114330036 | Neut_R0038 | - | 20 Trp tRNA
|

1913105 | 1913179 | - | 75 | 114330036 | Neut_R0039 | - | 12 Thr tRNA
|

1913215 | 1913288 | - | 74 | 114330036 | Neut_R0040 | - | 01 Gly tRNA
|

1913401 | 1913485 | - | 85 | 114330036 | Neut_R0041 | - | 18 Tyr tRNA
|

2193671 | 2193747 | + | 77 | 114330036 | Neut_R0042 | - | 11 Arg tRNA
|

2193816 | 2193891 | + | 76 | 114330036 | Neut_R0043 | - | 17 Phe tRNA
|

2205667 | 2205759 | - | 93 | 114330036 | Neut_R0044 | - | 08 Ser tRNA
|

2450231 | 2450307 | - | 77 | 114330036 | Neut_R0045 | - | 03 Pro tRNA
|

2634560 | 2634920 | - | 361 | 114330036 | Neut_R0046 | - | tmRNA |

2649398 | 2649634 | + | 237 | 114330036 | Neut_R0047 | - | RNA component of RNaseP |