Материалы:NC 003155

```
LOCUS NC_003155 9025608 bp DNA linear BCT 13-APR-2006
DEFINITION Streptomyces avermitilis MA-4680, complete genome.
ACCESSION NC_003155
VERSION NC_003155.3 GI:57833846
KEYWORDS .
SOURCE Streptomyces avermitilis MA-4680
ORGANISM Streptomyces avermitilis MA-4680
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
Streptomycineae; Streptomycetaceae; Streptomyces.
REFERENCE 1
AUTHORS Ikeda,H., Ishikawa,J., Hanamoto,A., Shinose,M., Kikuchi,H.,
Shiba,T., Sakaki,Y., Hattori,M. and Omura,S.
TITLE Complete genome sequence and comparative analysis of the industrial
microorganism Streptomyces avermitilis
JOURNAL Nat. Biotechnol. 21 (5), 526-531 (2003)
PUBMED 12692562
REFERENCE 2
AUTHORS Omura,S., Ikeda,H., Ishikawa,J., Hanamoto,A., Takahashi,C.,
Shinose,M., Takahashi,Y., Horikawa,H., Nakazawa,H., Osonoe,T.,
Kikuchi,H., Shiba,T., Sakaki,Y. and Hattori,M.
TITLE Genome sequence of an industrial microorganism Streptomyces
avermitilis: deducing the ability of producing secondary
metabolites
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 98 (21), 12215-12220 (2001)
PUBMED 11572948
REFERENCE 3 (bases 1 to 9025608)
AUTHORS .
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (bases 1 to 9025608)
AUTHORS Omura,S., Ikeda,H., Ishikawa,J., Hanamoto,A., Takahashi,C.,
Shinose,M., Takahashi,Y., Horikawa,H., Nakazawa,H., Osonoe,T.,
Kushida,N., Shiba,T., Sakaki,Y. and Hattori,M.
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2002) Kitasato University, Kitasato Institute for
Life Sciences, 1-15-1 Kitasato, Sagamihara, Kanagawa 228-8555,
Japan
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BA000030.
On Jan 14, 2005 this sequence version replaced gi:29826540.
```



## Расположение РНК

Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|

357776 | 357847 | + | 72 | 57833846 | SAVt01 | - | Anticodon: CAC |

1675869 | 1675942 | + | 74 | 57833846 | SAVt02 | - | Anticodon: CAT |

1965347 | 1965423 | - | 77 | 57833846 | SAVt03 | - | Anticodon: GGG |

1992012 | 1992088 | - | 77 | 57833846 | SAVt04 | - | Anticodon: GGG |

2222599 | 2222686 | - | 88 | 57833846 | SAVt05 | - | Anticodon: GAG |

3072632 | 3072707 | - | 76 | 57833846 | SAVt06 | - | Anticodon: GGT |

3073559 | 3073684 | - | 126 | 57833846 | SAVr01 | - | 5S ribosomal RNA |

3073772 | 3076895 | - | 3124 | 57833846 | SAVr02 | - | 23S ribosomal RNA |

3077206 | 3078735 | - | 1530 | 57833846 | SAVr03 | - | 16S ribosomal RNA |

3295252 | 3295324 | - | 73 | 57833846 | SAVt07 | - | Anticodon: CTC |

3295345 | 3295416 | - | 72 | 57833846 | SAVt08 | - | Anticodon: CTG |

3295438 | 3295510 | - | 73 | 57833846 | SAVt09 | - | Anticodon: CTC |

3295573 | 3295645 | - | 73 | 57833846 | SAVt10 | - | Anticodon: CTC |

3295688 | 3295759 | - | 72 | 57833846 | SAVt11 | - | Anticodon: CTG |

3655871 | 3655942 | + | 72 | 57833846 | SAVt12 | - | Anticodon: CCG |

3813093 | 3813166 | - | 74 | 57833846 | SAVt13 | - | Anticodon: CAT |

3815456 | 3815530 | - | 75 | 57833846 | SAVt14 | - | Anticodon: CAT |

4362610 | 4362695 | - | 86 | 57833846 | SAVt15 | - | Anticodon: TAA |

4410534 | 4410608 | + | 75 | 57833846 | SAVt16 | - | Anticodon: TTG |

4542466 | 4542542 | - | 77 | 57833846 | SAVt17 | - | Anticodon: CGC |

4589760 | 4589835 | + | 76 | 57833846 | SAVt18 | - | Anticodon: CCT |

4886830 | 4886906 | - | 77 | 57833846 | SAVt19 | - | Anticodon: TGT |

5024100 | 5024225 | - | 126 | 57833846 | SAVr04 | - | 5S ribosomal RNA |

5024313 | 5027435 | - | 3123 | 57833846 | SAVr05 | - | 23S ribosomal RNA |

5027746 | 5029275 | - | 1530 | 57833846 | SAVr06 | - | 16S ribosomal RNA |

5051970 | 5052043 | - | 74 | 57833846 | SAVt20 | - | Anticodon: CAT |

5055486 | 5055561 | - | 76 | 57833846 | SAVt21 | - | Anticodon: TTT |

5063087 | 5063159 | + | 73 | 57833846 | SAVt22 | - | Anticodon: TTC |

5063207 | 5063281 | + | 75 | 57833846 | SAVt23 | - | Anticodon: GTC |

5063306 | 5063382 | + | 77 | 57833846 | SAVt24 | - | Anticodon: GAA |

5068123 | 5068197 | + | 75 | 57833846 | SAVt25 | - | Anticodon: GTC |

5081791 | 5081866 | + | 76 | 57833846 | SAVt26 | - | Anticodon: GCC |

5085779 | 5085854 | + | 76 | 57833846 | SAVt27 | - | Anticodon: GCC |

5095065 | 5095146 | - | 82 | 57833846 | SAVs01 | - | small cytoplasmic, RNA (4.5S RNA) |

5095224 | 5095311 | + | 88 | 57833846 | SAVt28 | - | Anticodon: GGA |

5129698 | 5129782 | + | 85 | 57833846 | SAVt29 | - | Anticodon: CGA |

5154937 | 5155009 | - | 73 | 57833846 | SAVt30 | - | Anticodon: ACG |

5155215 | 5155305 | - | 91 | 57833846 | SAVt31 | - | Anticodon: GCT |

5177691 | 5177777 | - | 87 | 57833846 | SAVt32 | - | Anticodon: TGA |

5206939 | 5207028 | - | 90 | 57833846 | SAVt33 | - | Anticodon: GCT |

5299302 | 5299378 | + | 77 | 57833846 | SAVt34 | - | Anticodon: GAT |

5304905 | 5304977 | + | 73 | 57833846 | SAVt35 | - | Anticodon: TGC |

5322106 | 5322192 | + | 87 | 57833846 | SAVt36 | - | Anticodon: CAG |

5452769 | 5452842 | - | 74 | 57833846 | SAVt37 | - | Anticodon: CCC |

5594481 | 5594554 | - | 74 | 57833846 | SAVt38 | - | Anticodon: CGG |

5650316 | 5650389 | + | 74 | 57833846 | SAVt39 | - | Anticodon: CGT |

5759344 | 5760873 | + | 1530 | 57833846 | SAVr07 | - | 16S ribosomal RNA |

5761184 | 5764306 | + | 3123 | 57833846 | SAVr08 | - | 23S ribosomal RNA |

5764394 | 5764519 | + | 126 | 57833846 | SAVr09 | - | 5S ribosomal RNA |

5950170 | 5950251 | + | 82 | 57833846 | SAVt40 | - | Anticodon: GTA |

5956602 | 5956674 | + | 73 | 57833846 | SAVt41 | - | Anticodon: GGT |

5956721 | 5956793 | + | 73 | 57833846 | SAVt42 | - | Anticodon: CAT |

5964532 | 5964607 | + | 76 | 57833846 | SAVt43 | - | Anticodon: CCA |

6124388 | 6125917 | + | 1530 | 57833846 | SAVr10 | - | 16S ribosomal RNA |

6126228 | 6129350 | + | 3123 | 57833846 | SAVr11 | - | 23S ribosomal RNA |

6129438 | 6129563 | + | 126 | 57833846 | SAVr12 | - | 5S ribosomal RNA |

6202758 | 6203146 | + | 389 | 57833846 | SAVs02 | - | stable RNA |

6242261 | 6242335 | - | 75 | 57833846 | SAVt44 | - | Anticodon: GCA |

6279029 | 6279112 | - | 84 | 57833846 | SAVt45 | - | Anticodon: TAG |

6329202 | 6329278 | - | 77 | 57833846 | SAVt46 | - | Anticodon: CTT |

6335068 | 6335141 | - | 74 | 57833846 | SAVt47 | - | Anticodon: CTT |

6349312 | 6349385 | - | 74 | 57833846 | SAVt48 | - | Anticodon: CTT |

6372705 | 6372777 | - | 73 | 57833846 | SAVt49 | - | Anticodon: GTG |

6501509 | 6501584 | - | 76 | 57833846 | SAVt50 | - | Anticodon: TCT |

6604435 | 6604508 | - | 74 | 57833846 | SAVt51 | - | Anticodon: TCC |

6604662 | 6604738 | + | 77 | 57833846 | SAVt52 | - | Anticodon: TGG |

6653846 | 6653918 | + | 73 | 57833846 | SAVt53 | - | Anticodon: GGC |

6658303 | 6658375 | + | 73 | 57833846 | SAVt54 | - | Anticodon: GGC |

6875603 | 6875675 | + | 73 | 57833846 | SAVt55 | - | Anticodon: GTT |

6875681 | 6875753 | + | 73 | 57833846 | SAVt56 | - | Anticodon: GTT |

6875920 | 6875996 | + | 77 | 57833846 | SAVt57 | - | Anticodon: CAT |

7021984 | 7022058 | + | 75 | 57833846 | SAVt58 | - | Anticodon: TAC |

7471270 | 7471342 | - | 73 | 57833846 | SAVt59 | - | Anticodon: CAA |

7765515 | 7767044 | + | 1530 | 57833846 | SAVr13 | - | 16S ribosomal RNA |

7767351 | 7770474 | + | 3124 | 57833846 | SAVr14 | - | 23S ribosomal RNA |

7770611 | 7770736 | + | 126 | 57833846 | SAVr15 | - | 5S ribosomal RNA |

7937463 | 7937550 | - | 88 | 57833846 | SAVt60 | - | Anticodon: GAG |

8122352 | 8122426 | - | 75 | 57833846 | SAVt61 | - | Anticodon: GAC |

8122467 | 8122538 | - | 72 | 57833846 | SAVt62 | - | Anticodon: GAC |

8122558 | 8122629 | - | 72 | 57833846 | SAVt63 | - | Anticodon: GAC |

8122631 | 8122704 | - | 74 | 57833846 | SAVt64 | - | Anticodon: GCA |

8122743 | 8122815 | - | 73 | 57833846 | SAVt65 | - | Anticodon: GCC |

8129564 | 8129635 | + | 72 | 57833846 | SAVt66 | - | Anticodon: CAC |

8139938 | 8140012 | + | 75 | 57833846 | SAVt67 | - | Anticodon: CAC |

8328598 | 8330127 | + | 1530 | 57833846 | SAVr16 | - | 16S ribosomal RNA |

8330438 | 8333560 | + | 3123 | 57833846 | SAVr17 | - | 23S ribosomal RNA |

8333648 | 8333773 | + | 126 | 57833846 | SAVr18 | - | 5S ribosomal RNA |

8576989 | 8577062 | + | 74 | 57833846 | SAVt68 | - | Anticodon: GGG |