These calculations include an implicit solvation term, and the component effects of this term, and of other energetic partitions, can be viewed graphically. PDF Datasheet Binding Site Analysis combines several tools that enable you to identify and characterize a protein's binding site, then use those characteristics to look for similar features in other proteins of known structure. PDF Datasheet Biopolymer constructs models of peptides, proteins, carbohydrates, and nucleic acids for visualizing complex macromolecular structures and for use in further simulation work. PDF Datasheet . PDF Datasheet .
Simulations provide insight into molecular-level structure, interactions, and energetics.
PDF Datasheet Converter builds 3D models from 2D structural database output. PDF Datasheet DeCipher is a powerful and flexible program for high-level analysis of molecular structure and the results of molecular dynamics simulations. PDF Datasheet . DelPhi calculates electrostatic potentials and solvation energies of both large and small molecules, including nucleic acids. You can use DelPhi to rigorously examine the effects of charge distribution, ionic strength, and dielectric constant on the electrostatic potentials of macromolecules.