I have one metabolite that is no longer used in my model.
Some models take an excessive long time to execute.
I want all the data to be output on one single file but the program crashes. Gepasi is a Microsoft Windows program intended for the simulation of the kinetics of systems of chemical and biochemical reactions. The program is aimed at the study and teaching of the behaviour of such systems. The user supplies the program with information about the stoichiometric structure of the pathway, kinetics of each reaction, volumes of the compartments and initial concentration of all chemical species. The program then builds the differential equations that govern the behaviour of the system and solves them.