The northern portion of the uplands consists of disturbed native grassland, now dominated by old field bromegrass. The southern portion has been seeded to dense nesting cover. Aspen groves and willow occur throughout the area. The permanent wetland is largely open water marsh with dense stands of cattail and bulrush.
Temporary wetlands consist largely of sedge meadows.
A self-guiding nature trail highlights the various plant communities of the Wildlife Area. A parking lot and rest area with picnic tables helps to control public use of the area. None Public Use Blue Quills National Wildlife Area is used primarily as an outdoor biological classroom and ecological interpretation area by local schools. Restrictions Public use is controlled by the National Wildlife Area Regulations. A public information sign at the access site lists permitted activities and shows the designated public use area.