The composition of the active region is shown. The dinucleotide composition of the active region and an expected dinucleotide composition is shown. The expected composition is calculated from the base composition assuming a random order of bases in the sequence. See figure 9.1. The dinucleotide composition display 2.3 Calculating the codon composition This function counts codons, amino acid composition, protein molecular weights, hydrophobicity and base compositions.
Users select the segments of the sequence to be analysed.
The alternative displays its codon tables so that the total for each amino acid sums to 100. This makes it easier to see any bias present in the codon usage. The alternative is to use a feature table. The start of the segment to be analysed. The end of the segment to be analysed.