Features folks can paginate using Quark, but most of us have to draw lines. It's a real cross to bear for the many young designers who come to the Times having done nothing but pagination in their brief careers. It's sort of a rude awakening. Not that I've seen. Usually copy editors get a day or two of training if design is involved.
Training is a big weakness.
They fail to realize that nobody trained you, and you have no way to know you're doing the right or wrong thing.