This program takes two sequences and finds regions where they are identical. It will not find identical regions smaller than the specified wordsize . Here is a sample session with wordmatch. The next line gives the headers for the subsequent columns of data. This consists for the names of the two sequence and the word 'Length'.
Subsequent lines consist of three columns fo numbers separated by spaces or TAB characters.
Each line contains the information on one identical region. The first column is the start position in the first sequence of the identical region. The second number is the start position in the second sequence. If no regions are found, the output file is blank. Data files None.