A curated source for information related to RNA molecules that have been sequenced. The goal of HTD is to provide a clone-based platform that represents as many of the human transcripts that have been sequenced as possible. A database on the structure of large ribosomal subunit RNA including indications of secondary structure elements for each sequence. This program determines 3D protein and RNA structures. These sequences are drawn from various rRNA collections such as GenBank and from individual laboratories around the world.
Prokaryotic sequences predominate.
These graphically show the sequence information, as well as gaps and mutual information of base paired positions. An extensive list of links to RNA related databases and web tools. An application that uses RNA optimal structure, basepair-probability matrix, and heat curve calculation to predict RNA structure. Provides annotated SRP RNA sequences from eukaryotes and archaea, phylogenetically ordered and aligned with their bacterial equivalents. We also make available representative RNA secondary structure diagrams where each base pair is proven by comparative sequence analysis.