2.4 Processing stages Realignment Open a new document file for realignment. Select the header files of the required images from a desktop folder or from a previously created list. Select Calculate, Settings, then enter Realign options as in SPM96. To execute the realignment, enter Calculate then Start. The resulting realignment parameters are displayed in the left pane of the realignment document.
Normalization Open a new document file for normalization.
The defaults for normalization are the same as SPM96. Changes can be made by editing the input list for the normalization document. Select Calculate, Setting, then enter normalization parameters under General, Parameter estimation and Reslicing, then Start. Smoothing Open a new document file for smoothing. Select Calculate, Settings, enter the required parameters, then Start.