The query and edit capabilities of FPC are then used to identify clones for sequencing which are sent to our tracking database Gull. All the following scripts have help, i.e. if you type the script name followed by a -h', it will print out a description of the parameters and output. The chromosome number and associated fpc directory must be registered in this perl script. The destination directory is also specified in the script. The input file is a keyset dump of clones from acedb.
Output Following the header is a list of clones from the input file.
It finds all the contigs in humanmap.fpc that contains a clone from the input, and it outputs all the clones from the 'hit' contigs. The version of humanmap.fpc used is assembled here at the Sanger Centre using a cutoff 1e-10. The chromosome number and associated fpc directory must be registered in this perl script. The destination directory is also specified in the script. The input file is a list of clone names.