Dong Xu, Chung-Jung Tsai, and Ruth Nussinov. Mechanism and Evolution of Protein Dimerization Protein Science. Ying Xu, Dong Xu, and Edward C. Uberbacher. An efficient computational method for globally optimal threading. Dong Xu, Michael A. Unseren, Ying Xu, and Edward C. Uberbacher.
Protein fold recognition at the secondary structure level.
Ying Xu, Dong Xu, Oakley H. Crawford, J. Ralph Einstein, Frank Larimer, Edward C. Uberbacher, Michael A. Unseren, and Ge Zhang. Ying Xu and Dong Xu. Dong Xu, Ying Xu, Gary Li, and Jizhong Zhou. A Computer Program for Generating Gene-Specific Fragments for Microarrays. Inc. Tokyo, Japan.