Successful protein fold recognition by optimal sequence threading validated by rigorous blind testing. A Practical Approach . Assessment of protein models with three-dimensional profiles. CATH- A Hierarchic Classification of Protein Domain Structures. A 3D-1D substitution matrix for protein fold recognition that includes predicted secondary structure of the sequence.
Protein fold recognition by prediction-based threading.
A test of lattice protein folding algorithms. The incorporation of null correspondences into the matching problem. J. Comp.-Aided Mol. A surface of minimum area metric for the structural comparison of proteins. Using ierative dynamic programming to obtain accurate pairwise and multiple alignments of protein structures.