De novo protein design using pairwise potentials and a genetic algorithm. Protein domain superfolds and superfamilies. Protein motifs and folding recognition. Successful protein fold recognition by optimal sequence threading validated by rigorous blind testing. Modelling and predicting alpha-helical transmembrane structures.
Protein folds - towards understanding folding from inspection of native structures.
Series B. 348, 71-79. Theoretical approaches to designing novel sequences to fit a given fold. Protein fold recognition by sequence threading - tools and assessment techniques. Combining protein evolution and secondary structure. Molecular biology and evolution.