IMOD IMOD is a set of image processing, modeling and display programs used for 3D reconstruction of EM serial sections, tomographic sections and optical sections developed by The Boulder Laboratory for 3-Dimensional Fine Structure. SEM Align Align is a Windows program for aligning grayscale images. The output is suitable for use with IGL Trace for making 3D measurements and reconstructions. It's primary advantage over other programs is that it is much more interactive and easier to use. It specializes in 2d image manipulation.
Image can acquire, display, edit, enhance, analyze and animate images.
Among its functions, Image can be used to measure area, mean, centroid, perimeter, etc. of user defined regions of interest. It also performs automated particle analysis and provides tools for measuring path lengths and angles. A flexible, modular, commercial package for analyzing and viewing data. VMD molecular visualization A free molecular visualization program designed for interactive image display. This software is capable of animation, manipulation and analysis of proteins, nucleic acids, lipid membranes and other biological molecules.