Marrying structure and genomics. A modified definition of SOV, a segment-based measure for protein secondary structure prediction assessment. A platform for integrating threading results with protein family analyses. Effective use of sequence correlation and conservation in fold recognition. Twilight zone of protein sequence alignments.
Evolution teaches neural networks.
Third generation prediction of secondary structure. Bioinformatics, volxx, in press 2. Comparing function and structure between entire proteomes. Protein Science, volxx, in press 3. Alignments grow, secondary structure prediction improves.