There are two trains that have maintained a fairly consistent schedule in recent years. Six days a week, a train runs between Eugene Yard and Medford to gather loads and maintain the flow of empties to local crews working along the line. A second through freight is designed to move cars between Eugene and Roseburg, a distance of approximately 75 miles. This operation, as with the Eugene-Medford train, also rolls six days per week. There is a variety of motive power pulling long haul trains on the Siskiyou Line.
Local service is much more elaborate, with trains normally operating on weekdays.
Yoncalla is a small town located about 40 miles south of Eugene. Despite the name, there are no shippers in Yoncalla any more, due to the closure of a lumber mill there years ago. Looking a little farther south, there are three local crews based out of Roseburg. Both trains are scheduled five days a week. In Dillard, the crew sets out empties at Roseburg Forest Products' mills and returns to Roseburg with the day's lumber loads.