The EMH discovers the joys of the flesh. Seven endures the consequences. Ensign Kim gets his chance to play Captain Harry. Janeway's job is safe for a while. The Hirogen program the perfect prey.
Doc takes over the ship.
Janeway gets a day job and a boyfriend. Doc gives back the ship. Janeway gives up her day job and the boyfriend. Seven of Nine, jealous of Janeway, gets her own holographic boy toy. With a tattoo, no less.