Note that no space is allowed between -r and the number of replications. If you do not include -r option, the bootstrap test will not be performed. Bootstrapping will be done with enzymes as units. The number after -s is the seed number for a random number generator. Any integer except zero can be used.
Any positive integer is converted to a negative integer.
The program will run, check the input file, and report the data specifications in the input file. If a file with the same name exists before running the program, the file will be overwritten by the new result. If you want to keep the old file, you need to rename the previous file. The screen will show all the files including TRE files. You can make branch swapping according to your desire.