Lizards, such as the desert spiny lizard may be seen basking in the sun during the day. Birds are most conspicuous during the early morning hours. Diligent bird watchers may spot over 200 migratory, wintering and resident avian species. Evidence of night-roaming javelina , deer, coyote, bobcat, raccoons and ringtails can be seen as tracks or droppings. Pack rats abound along with day-time active cliff chipmunks, ground and rock squirrels.
Animals are important to the desert plant community.
Many desert plants rely on insects, birds, bats, rodents and other animals to pollinate their flowers and to disperse their seeds. The Arboretum is home to many different species of animal life. Many of these are active only at night and thus are not seen by the usual visitor to the area. The Javelina is often seen as are deer, coyotes, gray fox, ringtail cat, and an occasional bobcat. The bird fauna of the Arboretum is extensive.