cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0102337.10fu
title: SH0102337.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.25505/fiz.icsd.cc2h64hc
title: CSD 2299812: Experimental Crystal Structure Determination

description: Related Article: Mayra A. P. Gómez, Juan S. Rodríguez-Hernández, Bruno S. Araújo, Wellington C. Ferreira, Carlos W. A. Paschoal, Alejandro P. Ayala|2024|J.Phys.Chem.C|128|6821|doi:10.1021/acs.jpcc.3c08161
description: Related Article: Mayra A. P. Gámez, Juan S. Rodríguez‑Hernández, Bruno S. Araújo, Wellington C. Ferreira, Carlos W. A. Paschoal, Alejandro P. Ayala
|2025|J.Phys.Chem.C|128|6821|
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2h64kf
title: CSD 2299814: Experimental Crystal Structure Determination

description: Related Article: Mayra A. P. Gómez, Juan S. Rodríguez-Hernández, Bruno S. Araújo, Wellington C. Ferreira, Carlos W. A. Paschoal, Alejandro P. Ayala|2024|J.Phys.Chem.C|128|6821|doi:10.1021/acs.jpcc.3c08161
description: Related Article: Mayra A. P. Gámez, Juan S. Rodríguez‑Hernández, Bruno S. Araújo, Wellington C. Ferreira, Carlos W. A. Paschoal, Alejandro P. Ayala
|2025|J.Phys.Chem.C|128|6821|
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13145/bacdive110628.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive110629.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0102338.10fu
title: SH0102338.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.25505/fiz.icsd.cc2h64lg
title: CSD 2299815: Experimental Crystal Structure Determination

description: Related Article: Mayra A. P. Gómez, Juan S. Rodríguez-Hernández, Bruno S. Araújo, Wellington C. Ferreira, Carlos W. A. Paschoal, Alejandro P. Ayala|2024|J.Phys.Chem.C|128|6821|doi:10.1021/acs.jpcc.3c08161
description: Related Article: Mayra A. P. Gámez, Juan S. Rodríguez‑Hernández, Bruno S. Araújo, Wellington C. Ferreira, Carlos W. A. Paschoal, Alejandro P. Ayala
|2025|J.Phys.Chem.C|128|6821|
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2h64mh
title: CSD 2299816: Experimental Crystal Structure Determination

description: Related Article: Mayra A. P. Gómez, Juan S. Rodríguez-Hernández, Bruno S. Araújo, Wellington C. Ferreira, Carlos W. A. Paschoal, Alejandro P. Ayala|2024|J.Phys.Chem.C|128|6821|doi:10.1021/acs.jpcc.3c08161
description: Related Article: Mayra A. P. Gámez, Juan S. Rodríguez‑Hernández, Bruno S. Araújo, Wellington C. Ferreira, Carlos W. A. Paschoal, Alejandro P. Ayala
|2025|J.Phys.Chem.C|128|6821|
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13145/bacdive110629.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive110630.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.25505/fiz.icsd.cc2h64nj
title: CSD 2299817: Experimental Crystal Structure Determination

description: Related Article: Mayra A. P. Gómez, Juan S. Rodríguez-Hernández, Bruno S. Araújo, Wellington C. Ferreira, Carlos W. A. Paschoal, Alejandro P. Ayala|2024|J.Phys.Chem.C|128|6821|doi:10.1021/acs.jpcc.3c08161
description: Related Article: Mayra A. P. Gámez, Juan S. Rodríguez‑Hernández, Bruno S. Araújo, Wellington C. Ferreira, Carlos W. A. Paschoal, Alejandro P. Ayala
|2025|J.Phys.Chem.C|128|6821|
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2h64pk
title: CSD 2299818: Experimental Crystal Structure Determination

description: Related Article: Mayra A. P. Gómez, Juan S. Rodríguez-Hernández, Bruno S. Araújo, Wellington C. Ferreira, Carlos W. A. Paschoal, Alejandro P. Ayala|2024|J.Phys.Chem.C|128|6821|doi:10.1021/acs.jpcc.3c08161
description: Related Article: Mayra A. P. Gámez, Juan S. Rodríguez‑Hernández, Bruno S. Araújo, Wellington C. Ferreira, Carlos W. A. Paschoal, Alejandro P. Ayala
|2025|J.Phys.Chem.C|128|6821|
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13145/bacdive110630.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive110631.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0102339.10fu
title: SH0102339.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.25505/fiz.icsd.cc2h64jd
title: CSD 2299813: Experimental Crystal Structure Determination

description: Related Article: Mayra A. P. Gómez, Juan S. Rodríguez-Hernández, Bruno S. Araújo, Wellington C. Ferreira, Carlos W. A. Paschoal, Alejandro P. Ayala|2024|J.Phys.Chem.C|128|6821|doi:10.1021/acs.jpcc.3c08161
description: Related Article: Mayra A. P. Gámez, Juan S. Rodríguez‑Hernández, Bruno S. Araújo, Wellington C. Ferreira, Carlos W. A. Paschoal, Alejandro P. Ayala
|2025|J.Phys.Chem.C|128|6821|
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13145/bacdive110631.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0102340.10fu
title: SH0102340.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.c.3616775_d3
title: Additional file 2: Table S2. of Transcriptome profiling of Kentucky bluegrass (Poa pratensis L.) accessions in response to salt stress

description: Normalized expression values for differentially expressed transcripts detected among 24 Kentucky bluegrass shoot tissue samples. (XLSX 2558Â kb)
DOI: 10.6084/m9.figshare.c.3617285_d1
title: Additional file 6: Table S5. of DNA methylation and gene expression dynamics during spermatogonial stem cell differentiation in the early postnatal mouse testis

description: GO terms enriched for the differentially expressed genes identified by DAVID analysis. (XLSX 78 kb)
DOI: 10.6084/m9.figshare.c.3617285_d2
title: Additional file 3: Table S2. of DNA methylation and gene expression dynamics during spermatogonial stem cell differentiation in the early postnatal mouse testis

description: Locations and methylation levels of the DMRs. (XLSX 437 kb)
DOI: 10.6084/m9.figshare.c.3617285_d3
title: Additional file 1: Table S1. of DNA methylation and gene expression dynamics during spermatogonial stem cell differentiation in the early postnatal mouse testis

description: Sequencing runs and mapping summary. (XLSX 47 kb)
DOI: 10.6084/m9.figshare.c.3617243_d13
title: Additional file 14: of The topology, structure and PE interaction of LITAF underpin a Charcot-Marie-Tooth disease type 1C

description: Individual data values from three biological replicates, each consisting of 10–13 technical replicates, used to quantitate the degree of colocalisation between HA-LITAF constructs and wheat germ agglutinin as illustrated in Fig. 7d. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3617294_d1
title: Additional file 3: of Identification of plasma microRNAs as a biomarker of sporadic Amyotrophic Lateral Sclerosis

description: Results of process network analysis from Metacoreâ ˘. (CSV 2Â kb)
DOI: 10.6084/m9.figshare.c.3617285_d4
title: Additional file 5: Table S4. of DNA methylation and gene expression dynamics during spermatogonial stem cell differentiation in the early postnatal mouse testis

description: Expression levels of the differentially expressed genes. (XLSX 278 kb)
DOI: 10.6084/m9.figshare.c.3617468_d3
title: Additional file 4: of Deep divergence and rapid evolutionary rates in gut-associated Acetobacteraceae of ants

description: Distribution of AAB across ant samples. (XLS 50 kb)
DOI: 10.6084/m9.figshare.c.3617468_d4
title: Additional file 9: of Deep divergence and rapid evolutionary rates in gut-associated Acetobacteraceae of ants

description: Alignment file of 1,248 nucleotides and 53 taxa. This alignment was used for phylogenetic inference in Fig.Â 1 and Additional file 5. (TXT 66 kb)
DOI: 10.15468/dl.mkb8cb
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Rajella nigerrima (de Buen, 1960))"
 ]
}

 The dataset includes 12 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033925-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3617468_d5
title: Additional file 11: of Deep divergence and rapid evolutionary rates in gut-associated Acetobacteraceae of ants

description: Genbank accession numbers of all taxa used in phylogenetic analyses. (XLS 26 kb)
DOI: 10.6084/m9.figshare.c.3617441_d13
title: Additional file 9: Table S1. of Landscape-level movement patterns by lions in western Serengeti: comparing the influence of inter-specific competitors, habitat attributes and prey availability

description: Results of competition to determine best model for each hypothesis (INTER, LAND and PREY) for each Season (DRY and WET). Best models as determined by ΔAIC are highlighted using bold text. Where ΔAIC
DOI: 10.6084/m9.figshare.c.3617468_d6
title: Additional file 8: of Deep divergence and rapid evolutionary rates in gut-associated Acetobacteraceae of ants

description: Primers used in this study. (XLS 29 kb)
DOI: 10.6084/m9.figshare.c.3617762_d1
title: MOESM7 of RNAseq reveals hydrophobins that are involved in the adaptation of Aspergillus nidulans to lignocellulose

description: Additional file 7: File S3. The GO terms over-represented in the lists of gene up or down regulated post transfer from fructose to SEB for 12 h.
DOI: 10.6084/m9.figshare.c.3617723_d12
title: MOESM15 of A comparison of the protein-coding genomes of two green sulphur bacteria, Chlorobium tepidum TLS and Pelodictyon phaeoclathratiforme BU-1

description: Additional file 15. 1_copy_both_spp.pl. Perl script used to identify the protein families with one copy in both species from UniProt.
DOI: 10.6084/m9.figshare.c.3617744_d5
title: Additional file 6: Table S3. of No evidence of prenatal diversifying selection at locus or supertype levels in the dog MHC class II loci

description: Result table for segregation of heterozygous and homozygous offspring in different mating cross types for the MHC loci, the three-locus haplotype and the MHC supertype levels, heterozygous mothers combined and the numbers of offspring that inherited maternal shared or paternal non-shared allele from their father. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3617759_d2
title: Additional file 7: Table S7. of Genetic analysis of phytoene synthase 1 (Psy1) gene function and regulation in common wheat

description: Details of the differentially expressed genes (DEGs) consistent in all three transgenic lines. (XLSX 82.6Â kb)
DOI: 10.6084/m9.figshare.c.3617723_d13
title: MOESM10 of A comparison of the protein-coding genomes of two green sulphur bacteria, Chlorobium tepidum TLS and Pelodictyon phaeoclathratiforme BU-1

description: Additional file 10. ensembl_multi_cp_both_spp.pl. The Perl script used to identify the protein families with more than one copy for both species from Ensembl Genomes.
DOI: 10.6084/m9.figshare.c.3617744_d6
title: Additional file 5: Figures S5 and S6. of No evidence of prenatal diversifying selection at locus or supertype levels in the dog MHC class II loci

description: Biplots of the first two PCs in supertype clusters of DLA-DRB1 (Figure S5) and DLA-DQB1 loci (Figure S6). The biplots were done using the ggbiplot function in R. Ellipses show Normal contour lines with 68% probability for each cluster. (ZIP 20Â kb)
DOI: 10.6084/m9.figshare.c.3617723_d14
title: MOESM3 of A comparison of the protein-coding genomes of two green sulphur bacteria, Chlorobium tepidum TLS and Pelodictyon phaeoclathratiforme BU-1

description: Additional file 3. P_phaeoclathratiforme.fa. The genome-wide protein set of Pelodictyon phaeoclathratiforme BU-1, downloaded from UniProt.
DOI: 10.6084/m9.figshare.c.3617723_d15
title: MOESM12 of A comparison of the protein-coding genomes of two green sulphur bacteria, Chlorobium tepidum TLS and Pelodictyon phaeoclathratiforme BU-1

description: Additional file 12. ensembl_1_cp_ppb_x_cp_cct.pl. The Perl script used to identify the protein families containing 1 copy in P. phaeoclathratiforme and multiple copies in C. tepidum from Ensembl Genomes.
DOI: 10.6084/m9.figshare.c.3617771_d1
title: Additional file 1 of Development and demonstration of a state model for the estimation of incidence of partly undetected chronic diseases

description: Scripts for the statistical software R. The zip-file contains the analysis for the simulation. For detailed instructions unzip the file and refer to the readme.txt file. (ZIP 3.01 Kb)
DOI: 10.6084/m9.figshare.c.3617777_d9
title: Additional file 8: of Contact diaries versus wearable proximity sensors in measuring contact patterns at a conference: method comparison and participantsâ   attitudes

description: Contact data â   survey matched to surveys. (CSV 5 kb)
DOI: 10.15468/dl.hv9y5b
title: Occurrence Download

description: A dataset containing 867 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Sympterygia brevicaudata (Cope, 1877))"
 ]
}

 The dataset includes 867 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033926-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3618005_d1
title: Additional file 2: of In vivo Ebola virus infection leads to a strong innate response in circulating immune cells

description: 111 strongly upregulated genes in PBMCs in the macaque aerosol Ebola dataset. For each gene, we report the log fold-change at 6Â days post-infection, the corresponding adjusted p-values and its functional category. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.c.3618005_d2
title: Additional file 1: of In vivo Ebola virus infection leads to a strong innate response in circulating immune cells

description: 125 strongly upregulated genes in PBMCs in the macaque intramuscular Ebola dataset. For each gene, we report the log fold-changes at 4 and 7Â days post-infection, the corresponding adjusted p-values and its functional category. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3618014_d2
title: Additional file 5: of An integrated genetic-epigenetic analysis of schizophrenia: evidence for co-localization of genetic associations and differential DNA methylation

description: The DNA methylation values for the specific probes used in the MZ twin replication analysis. (XLSX 3313 kb)
DOI: 10.6084/m9.figshare.c.3618023_d1
title: Additional file 1: of Workplace health promotion for older workers: a systematic literature review

description: Quality assessment of the included studies. (XLSX 17.0 KB)
DOI: 10.6084/m9.figshare.c.3618026_d1
title: MOESM1 of Enumeration of minimal stoichiometric precursor sets in metabolic networks

description: Additional file 1. A list of reactions F that form a MD-stoichiometric factory, the stoichiometric matrix restricted to the reactions in F, one possible flux vector v, and the vector of the net production of all compounds.
DOI: 10.6084/m9.figshare.c.3618014_d3
title: Additional file 2: of An integrated genetic-epigenetic analysis of schizophrenia: evidence for co-localization of genetic associations and differential DNA methylation

description: Supplementary Tables S1-S11. (XLSX 6.83 mb)
DOI: 10.6084/m9.figshare.c.3618029_d1
title: Additional file 4: Figure S4. of DNA methylation patterns associated with oxidative stress in an ageing population

description: Overview of the analysis of genetic associations of oxidative stress-associated DNA methylation. The diagram shaded in blue depicts the associations at the two instances where we observed an overlap across genotype-CpG (FDR
DOI: 10.6084/m9.figshare.c.3618074_d1
title: Additional file 5: of Deep sequencing transcriptional fingerprinting of rice kernels for dissecting grain quality traits

description: RNA-Seq results for DEGs belonging to the main classes of genes affecting rice grain quality. (XLSX 427Â kb)
DOI: 10.6084/m9.figshare.c.3618047_d4
title: Additional file 3: of The CXCR4 antagonist plerixafor enhances the effect of rituximab in diffuse large B-cell lymphoma cell lines

description: Data used to generate Figure 2. (XLSX 18 kb)