cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.12769924
title: Coral Geochemical Proxy Thermometer via Machine Learning

description: The model input dataset is shown in Table S1. Note: Monthly satellite SST records with a spatial resolution of 0.25° × 0.25° for each coral reef region are obtained from the NOAA OISSTv2 AVHRR SST dataset (https://www.psl.noaa.gov/data/gridded/data.noaa.oisst.v2.highres.html) and used as SST data. The coral proxy dataset was collected from the following 4 studies(see References)

Model evaluation and propagated errors are presented in Table S2.

Source codes of the three outperformed non-linear models show in SourceCode.zip.
DOI: 10.5281/zenodo.14597769
title: Data for antibiotic translation inhibition assays using the PURE system

description: Raw data for translation inhibition assays using the PURE system, related to Isozaki et al.
DOI: 10.3535/vjx-3jx-ze7
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zh4-9nx-286
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5281/zenodo.15044417
title: Delta Ct HCC peritumours and tumours

description: The dataset file contains delta CT data relating to the validation of expression of 90 genes in 59 matched HCV-related HCC and peri-tumor tissues using a custom multiplex array qPCR. The ΔΔCt method was used to calculate gene expression.
DOI: 10.3535/8sk-t24-75e
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5281/zenodo.10890147
title: Review dataset "Ethnobiology's contributions to sustainability science"

description: This search was performed on April 2023 and allowed us to identify a total of 280 articles published between 2015 and 2022 (Supplementary Material 21).
DOI: 10.5281/zenodo.11083220
title: Survey questionnaire data on Perceptions, interactions, and responses to urban natural environments through ecological momentary assessment

description: Data consist of a R file format and contain the cleaned survey quistionaire data where people were asked about their perceptions, interactions, and responses to urban natural environments. For more information please read the following report Published as part of the Regreen Horizon project. 

Panduro, T.E., Zandersen, M., Guell, C., Lovell, R., Garrett, J., Taylor, T., Fullam, J., Amegbor, P. (2024) Perceptions, interactions, and responses to urban natural environments through ecological momentary assessment (EMA). Deliverable D4.6. REGREEN - Fostering nature-based solutions for smart, green and healthy urban transitions in Europe and China. Horizon2020 Grant No. 821016.  https://www.doi.org/10.5281/zenodo.10594764
DOI: 10.3535/7bp-hh6-da9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/llm-pcm-yls
title: Granite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5281/zenodo.11186744
title: Water table dynamics and surface soil moisture from an experimental peatland restoration area (Forsinard, Scotland, UK), 2017-2022/2023

description: This dataset is from an experiment aimed to understand the changes in water level and soil moisture dynamics after rewetting of formerly afforested blanket bog areas. Specifically, it was aiming to test whether the water table and soil moisture dynamics in these areas return to those of control areas that had never been drained or afforested. The data span the period of summer 2017- summer 2022/2023, with gaps in individual time series marked with -9999 entries.
DOI: 10.5281/zenodo.14715067
title: Datasets and scripts for manuscript "Inequalities in park access and associated health outcomes"

description: Scripts and data to accompany the manuscript "Inequalities in park access and associated health outcomes"
DOI: 10.5281/zenodo.14915596
title: Replication archive for: "Using net-zero carbon debt to track climate overshoot responsibility"

description: Replication archive for: Pelz S, Ganti G, Lamboll R, Grant L, Smith C, Pachauri S, Rogelj J, Riahi K, Thiery W, Gidden M (2025) Using net-zero carbon debt to track climate overshoot responsibility. PNAS (in press) 10.1073/pnas.2409316122.
DOI: 10.3535/kpr-wlx-k78
title: †Homoeospira Hall & Clarke, 1893

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lpj-nyp-f93
title: Porphyrite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ekr-weg-svl
title: Porphyrite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s87-z7h-lda
title: bentonite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5281/zenodo.14097742
title: BIONANO-MSCA4U. Biosynthesis of AgNP by Pseudomonas Z9.3 as an antimicrobial agent against bacterial and fungal pathogens

description: These data correspond to characterization of AgNP biosynthetized using metabolites from the beneficial strain of Pseudomonas sp. Z9.3 and its potential to inhibit growth of bacterial and fungal pathogens as causative agents of human and plant diseases. All data were obtained within the MSCA4Ukraine project (ID:101101923), funded by the European Union. The majority of the data was in comma separated variable (.csv) format, which can be imported into rich-text files for word-processing or into spreadsheets. Also, data was generated and combined in the following formats (in .txt and .pdf versions).

Abbreviation of sample names: S1_9 – sample 1 synthesized at pH 9 and a ratio of 5:1 (bacterial filtrate / 5 mM AgNO3); S4_7 – sample 4 synthesized at pH 7 and a ratio of 2:4 (bacterial filtrate / 5 mM AgNO3).
DOI: 10.3535/1s4-34k-pmm
title: †Batostoma granulosum Bassler, 1911

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5281/zenodo.14844269
title: The differentiated impacts and constraints of allometry, phylogeny, and environment on the ruminants' ankle bone  Datasets and Codes

description: This repository contains the datasets and R code used in our study on the morphological variation of the astragalus in ruminant artiodactyls. The materials include raw and processed 3D geometric morphometric data, and scripts for conducting allometric, clade, and ecomorphological analyses.
DOI: 10.5281/zenodo.15040103
title: Scripts and datasets required for native niche quantification and Niche Margin Index calculation for 45 invasive alien plants
title: Calculation of NMI value using 3 different methods of native climatic niche quantification

description: The file "allData_nmi_EASIN_species_kde_99.rds" presents the main results of this research- the Niche Margin Index (NMI) values for every out-of-the-native-range occurrence point of 45 invasive alien plants, calculated using three different methods of quantifying the native climatic niche of the target species.Included here also are the R scripts used to calculate the NMI based on three different methods of native niche quantification. In addition, code and data are provided to select the optimal SDMs for one method of the native climatic niche quantification, fit the optimal SDMs, geographically project the results, sum the projections and finally polygonize them. No files are provided to generate background points as per our unique method of sampling stratified randomly in environmental space. Instead, the background point files for each species are provided.

When running the R scripts, all data and scripts provided are assumed to be located in the work directory specified by the user, and .zip folders provided are assumed to be extracted to there, as well.

The file "pca_world_all_land.rds" is a PCA result of the chosen CHELSA climatic variables across all terrestrial surfaces of the world. It is required to quantify the native climatic niche. 

If the user wishes to run the scripts on a slurm environment, both provided bash scripts are needed, but the "submit_jobs.sh" scripts calls the "NMI_run_SDMs_array_short_jobs.sh" script. This is to ensure that only one array job for one species runs at a time. This in turn is to optimize slurm cluster economy. The bash script contains an array function to make the jobs smaller and use up less time.The R scripts contain brief explanations on how to run the code outside of a slurm cluster environment, but the size of the "pca_world_all_land.rds" file when loaded in R will possibly make the full analysis impossible to run outside of a HPC cluster environment.
DOI: 10.3535/9vy-x0t-v14
title: Almandine

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ccn-81a-gsg
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5281/zenodo.15046910
title: Lab and TELEMAC 3D model data of mean flow and turbulence around a monopile

description: Data used in publication of the research. Data is saved as .csv files, code used to plot the data is MATLAB, but saved as plain text files. I have given some tips and notes on using this code and data.
DOI: 10.3535/25y-e81-bs5
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/eqa-33e-kwc
title: †Eoplectodonta Kozlowski, 1929

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/7dj-92b-e9b
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jvx-7we-54l
title: Diabase

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/t11-c46-fgs
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qbv-917-v0z
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xx0-1k2-fy1
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/94l-y80-nvq
title: Streptelasma calicula Hall, 1852

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/b2a-6dl-55m
title: †Maclurites Lesueur, 1818

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6x8-8by-zfj
title: †Straparollus Montfort, 1810

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xbj-3ys-p6a
title: †Platyceras Conrad, 1840

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4ja-vex-yxx
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5tb-hgl-29q
title: †Murchisonia d'Archiac & Verneuil, 1841

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xr7-jn1-34q
title: †Eridotrypa aedilis (Eichwald, 1855)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ylf-mtk-gg4
title: †Eoplectodonta Kozlowski, 1929

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/l89-dnv-atr
title: Propora bacillifera Lindström

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sya-z2l-8r2
title: Mollusca

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/56x-pjv-ygq
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6pq-llt-1v2
title: †Eoplectodonta Kozlowski, 1929

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/eq2-age-rq0
title: Bivalvia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qab-x0a-5yn
title: †Orthoceratidae F. McCoy, 1844

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/a8z-7v9-9ej
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jtg-91x-8jl
title: Granite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/19q-18y-7p9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ygy-4gt-my2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/asp-eww-cyf
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w8r-keg-bjc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9pl-t02-ln5
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ypq-m1x-k70
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q8c-yfw-1x6
title: †Ambonychia J. Hall, 1847

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zqb-jq5-3fz
title: †Homoeospira Hall & Clarke, 1893

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5g0-q16-bjg
title: †Holopea J. Hall, 1847

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/b3m-lnh-5fr
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/j56-z7f-1db
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5mt-ab7-bx1
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q4d-vjg-144
title: †Proetidae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/18j-69j-gqa
title: †Eoplectodonta Kozlowski, 1929

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/a3r-g2f-nl5
title: †Straparollus Montfort, 1810

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5xa-8jm-0jb
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vjw-vsj-gn9
title: Equidae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/by7-xpp-5wy
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/j30-86n-tnr
title: †Lophospira Whitfield, 1886

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sdk-bh8-tls
title: †Murchisonia d'Archiac & Verneuil, 1841

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/586-cm3-2pk
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xn7-36k-wx8
title: †Orthoceras Bruguière, 1789

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/312-h0f-ccd
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rb3-zd5-5z2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8av-mm9-mf0
title: Streptelasma calicula Hall, 1852

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mvm-7kq-b8v
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tfm-t6e-ja4
title: Illaenus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mqr-plt-2q7
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.15468/dl.ml2ord
title: Occurrence Download

description: A dataset containing 6980 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Chondrohierax uncinatus (Temminck, 1822)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6980 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001022-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-13438
title: McBride, James T., 1991 June - Sept.

description: McBride, James T., 1991 June 18 - September 21. PART OF A SERIES: The staff of Gibson, Dunn & Crutcher coordinated witness interviews and conducted an extensive review of complaints filed against LAPD officers. Included in the series are summaries of witness interviews, statistics and investigative reports related to citizen complaints, an analysis on adjudicated cases involving use-of-force complaints, reports regarding LAPD's recruitment of African American officers and community oriented policing, and an excerpt from Malcolm Sparrow's Beyond 9-1-1. Also included are materials related to the firm's work product, including attorney notes, work plans, memoranda, and drafts of chapters for the Commission report.
DOI: 10.15468/dl.x4vmzx
title: Occurrence Download

description: A dataset containing 6137 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Akebia trifoliata (Thunb.) Koidz."
 ]
}

 The dataset includes 6137 records from 137 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058178-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pyy2f5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "SpeciesKey" : [
 "is Metopium brownei (Jacquin) Urban"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002800-240506114902167/datasets/export for details.
DOI: 10.25549/independent-c69-12744
title: Anonymous interviews: Officer #1, 1991-06-18

description: Robert L. Corbin, memorandum, 1991 June 18, re Independent Commission on LAPD, Interview with local police chief #1 on 6/17/91. PART OF A SERIES: The staff of Gibson, Dunn & Crutcher coordinated witness interviews and conducted an extensive review of complaints filed against LAPD officers. Included in the series are summaries of witness interviews, statistics and investigative reports related to citizen complaints, an analysis on adjudicated cases involving use-of-force complaints, reports regarding LAPD's recruitment of African American officers and community oriented policing, and an excerpt from Malcolm Sparrow's Beyond 9-1-1. Also included are materials related to the firm's work product, including attorney notes, work plans, memoranda, and drafts of chapters for the Commission report.
DOI: 10.15468/dl.w9qz2r
title: Occurrence Download

description: A dataset containing 95 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Lithocarpus densiflorus (Hook. & Arn.) Rehder",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 95 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001022-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-1712
title: Press clippings

description: Press clippings. PART OF A SERIES: The series consists of press clippings that were analyzed by Irell & Manella. Topics include the Rodney King incident, abuse and corruption within the LAPD, the embattlement of Chief of Police Daryl Gates, the formation of the Christopher Commission, and the Commission's findings and recommendations.
DOI: 10.15468/dl.3mwt5c
title: Occurrence Download

description: A dataset containing 5032 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rhizophora apiculata Blume",
 "Year 2000-2023"
 ]
}

 The dataset includes 5032 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012927-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pu93vh
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Czechia",
 "TaxonKey is Marmaronetta angustirostris (Ménétries, 1832)"
 ]
}

 The dataset includes 29 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001022-171025204727650/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-18688
title: LAPD interviews #3(c) (1 of 2), 1991 May-June

description: Los Angeles Police Department interviews #3(c) (1 of 2), 1991 May 30 - June 24. PART OF A SERIES: Materials in the series fall into one of several categories related to the Independent Commission's work product: (1) Commission meeting materials, which include meeting agendas, work plans, memoranda, and articles about police misconduct that were circulated and reviewed during the Commission's internal meetings; (2) public correspondence, which includes citizen complaints against the LAPD in the form of written testimony, articles, and an audio cassette tape, as well as letters drafted by citizens in support of the LAPD; (3) summaries of interviews held with LAPD officers regarding Departmental procedures and relations; (4) public meeting materials, which include transcripts, supplementary documents, and witness statements that were reviewed at the Commission's public meetings; (5) press releases related to the formation and work product of the Commission; and (6) miscellaneous materials reviewed by the Commission during its study, including LAPD personnel and training manuals, a memorandum of understanding, and messages from the LAPD's Mobile Digital Terminal (MDT) system.