cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5526646
title: Urban-PLUMBER: Flux tower data archive – PL-Lipowa

description: # Urban-PLUMBER site data collection Files in this folder are associated with the manuscript: &gt; "Harmonized, gap-filled dataset from 20 urban flux tower sites" Use of any data must give credit through citation of the above manuscript and other sources as appropriate.<br> We recommend data users consult with site contributing authors and/or the coordination team in the project planning stage. <br> Relevant contacts are included in timeseries metadata. For site information and timeseries plots see https://urban-plumber.github.io/sites. For processing code see https://github.com/matlipson/urban-plumber_pipeline. ### Included files Within each site folder: - `index.html`: A summary page with site characteristics and timeseries plots.<br> - `SITENAME_sitedata_vX.csv`: comma seperated file for numerical site characteristics e.g. location, surface cover fraction etc.<br> - `timeseries/` (following files available as netCDF and txt)<br> - `SITENAME_raw_observations_vX`: site observed timeseries before project-wide quality control.<br> - `SITENAME_clean_observations_vX`: site observed timeseries after project-wide quality control. <br> - `SITENAME_metforcing_vX`: site observed timeseries after project-wide quality control and gap filling.<br> - `SITENAME_era5_corrected_vX`: site ERA5 surface data (1990-2020) with bias corrections as applied in the final dataset.<br> - `log_processing_SITENAME_vX.txt`: a log of the print statements through running the create_dataset_SITENAME scripts. ### Authors Mathew Lipson, Sue Grimmond, Martin Best, Andreas Christen, Andrew Coutts, Ben Crawford, Bert Heusinkveld, <br> Erik Velasco, Helen Claire Ward, Hirofumi Sugawara, Je-Woo Hong, Jinkyu Hong, Jonathan Evans, Joseph McFadden, <br> Keunmin Lee, Krzysztof Fortuniak, Leena Järvi, Matthias Roth, Nektarios Chrysoulakis, Nigel Tapper, Oliver Michels, <br> Simone Kotthaus, Stevan Earl, Sungsoo Jo, Valéry Masson, Winston Chow, Wlodzimierz Pawlak, Yeon-Hee Kim. Corresponding author: Mathew Lipson &lt;m.lipson@unsw.edu.au&gt;
DOI: 10.5281/zenodo.5526711
title: Urban-PLUMBER: Flux tower data archive – PL-Narutowicza

description: <br> # Urban-PLUMBER site data collection Files in this folder are associated with the manuscript: &gt; "Harmonized, gap-filled dataset from 20 urban flux tower sites" Use of any data must give credit through citation of the above manuscript and other sources as appropriate.<br> We recommend data users consult with site contributing authors and/or the coordination team in the project planning stage. <br> Relevant contacts are included in timeseries metadata. For site information and timeseries plots see https://urban-plumber.github.io/sites. For processing code see https://github.com/matlipson/urban-plumber_pipeline. ### Included files Within each site folder: - `index.html`: A summary page with site characteristics and timeseries plots.<br> - `SITENAME_sitedata_vX.csv`: comma seperated file for numerical site characteristics e.g. location, surface cover fraction etc.<br> - `timeseries/` (following files available as netCDF and txt)<br> - `SITENAME_raw_observations_vX`: site observed timeseries before project-wide quality control.<br> - `SITENAME_clean_observations_vX`: site observed timeseries after project-wide quality control. <br> - `SITENAME_metforcing_vX`: site observed timeseries after project-wide quality control and gap filling.<br> - `SITENAME_era5_corrected_vX`: site ERA5 surface data (1990-2020) with bias corrections as applied in the final dataset.<br> - `log_processing_SITENAME_vX.txt`: a log of the print statements through running the create_dataset_SITENAME scripts. ### Authors Mathew Lipson, Sue Grimmond, Martin Best, Andreas Christen, Andrew Coutts, Ben Crawford, Bert Heusinkveld, <br> Erik Velasco, Helen Claire Ward, Hirofumi Sugawara, Je-Woo Hong, Jinkyu Hong, Jonathan Evans, Joseph McFadden, <br> Keunmin Lee, Krzysztof Fortuniak, Leena Järvi, Matthias Roth, Nektarios Chrysoulakis, Nigel Tapper, Oliver Michels, <br> Simone Kotthaus, Stevan Earl, Sungsoo Jo, Valéry Masson, Winston Chow, Wlodzimierz Pawlak, Yeon-Hee Kim. Corresponding author: Mathew Lipson &lt;m.lipson@unsw.edu.au&gt;
DOI: 10.5281/zenodo.5526710
title: Urban-PLUMBER: Flux tower data archive – PL-Narutowicza

description: <br> # Urban-PLUMBER site data collection Files in this folder are associated with the manuscript: &gt; "Harmonized, gap-filled dataset from 20 urban flux tower sites" Use of any data must give credit through citation of the above manuscript and other sources as appropriate.<br> We recommend data users consult with site contributing authors and/or the coordination team in the project planning stage. <br> Relevant contacts are included in timeseries metadata. For site information and timeseries plots see https://urban-plumber.github.io/sites. For processing code see https://github.com/matlipson/urban-plumber_pipeline. ### Included files Within each site folder: - `index.html`: A summary page with site characteristics and timeseries plots.<br> - `SITENAME_sitedata_vX.csv`: comma seperated file for numerical site characteristics e.g. location, surface cover fraction etc.<br> - `timeseries/` (following files available as netCDF and txt)<br> - `SITENAME_raw_observations_vX`: site observed timeseries before project-wide quality control.<br> - `SITENAME_clean_observations_vX`: site observed timeseries after project-wide quality control. <br> - `SITENAME_metforcing_vX`: site observed timeseries after project-wide quality control and gap filling.<br> - `SITENAME_era5_corrected_vX`: site ERA5 surface data (1990-2020) with bias corrections as applied in the final dataset.<br> - `log_processing_SITENAME_vX.txt`: a log of the print statements through running the create_dataset_SITENAME scripts. ### Authors Mathew Lipson, Sue Grimmond, Martin Best, Andreas Christen, Andrew Coutts, Ben Crawford, Bert Heusinkveld, <br> Erik Velasco, Helen Claire Ward, Hirofumi Sugawara, Je-Woo Hong, Jinkyu Hong, Jonathan Evans, Joseph McFadden, <br> Keunmin Lee, Krzysztof Fortuniak, Leena Järvi, Matthias Roth, Nektarios Chrysoulakis, Nigel Tapper, Oliver Michels, <br> Simone Kotthaus, Stevan Earl, Sungsoo Jo, Valéry Masson, Winston Chow, Wlodzimierz Pawlak, Yeon-Hee Kim. Corresponding author: Mathew Lipson &lt;m.lipson@unsw.edu.au&gt;
DOI: 10.5281/zenodo.3531614
title: IO Islamic 3058. A succinct chronological list of all the rulers of the world

description: IO Islamic 3058. A succinct chronological list of all the rulers of the world A succinct chronological list of all the rulers of the world, that is, in particular of Îrân, Tûrân, and Hindûstân (تواریخ پادشاهان ایران و توران و هندوستان و غیره تمام جهان , see the colophon on fol. 19ᵇ) , beginning with Gayûmarth (see fol. 6ᵇ, 1. I: اول تخت نشین جهان گیومرث از فرزندان بهلائیل بن قینان بود او را سیاه نیز خوانند الخ) and concluding the list of the emperors of Dihlî with Muhammadshâh (on fol. 14ᵃ). The remainder of this short tract contains the rulers of the Dakhan on fol. 14ᵃ, of Bîjâpûr on fol. 15ᵃ, of Gujarât on fol.15ᵇ, of Mâlwah on fol.16ᵃ, of Bangâlah and Lakhnau on fol. 17ᵇ, of Jaunpûr, Multân, and Kashmîr on fol. 18ᵇ. Dated in the month Âsin, in the year 1196 of the Bangâli era (= 1789-90 CE). No. 3058, ff.6-19, 11. 14-15; Nasta’lik; size, 8 ⅛ in. by 6 ⅟2 in. <br>
DOI: 10.5281/zenodo.3531613
title: IO Islamic 3058. A succinct chronological list of all the rulers of the world

description: IO Islamic 3058. A succinct chronological list of all the rulers of the world A succinct chronological list of all the rulers of the world, that is, in particular of Îrân, Tûrân, and Hindûstân (تواریخ پادشاهان ایران و توران و هندوستان و غیره تمام جهان , see the colophon on fol. 19ᵇ) , beginning with Gayûmarth (see fol. 6ᵇ, 1. I: اول تخت نشین جهان گیومرث از فرزندان بهلائیل بن قینان بود او را سیاه نیز خوانند الخ) and concluding the list of the emperors of Dihlî with Muhammadshâh (on fol. 14ᵃ). The remainder of this short tract contains the rulers of the Dakhan on fol. 14ᵃ, of Bîjâpûr on fol. 15ᵃ, of Gujarât on fol.15ᵇ, of Mâlwah on fol.16ᵃ, of Bangâlah and Lakhnau on fol. 17ᵇ, of Jaunpûr, Multân, and Kashmîr on fol. 18ᵇ. Dated in the month Âsin, in the year 1196 of the Bangâli era (= 1789-90 CE). No. 3058, ff.6-19, 11. 14-15; Nasta’lik; size, 8 ⅛ in. by 6 ⅟2 in. <br>
DOI: 10.5281/zenodo.3588523
title: IO Islamic 3058 (2). Risâla-i-Râjâwalî, Table of Rulers of India

description: IO Islamic 3058 (2). Risâla-i-Râjâwalî, Table of Rulers of India
DOI: 10.5281/zenodo.3588522
title: IO Islamic 3058 (2). Risâla-i-Râjâwalî, Table of Rulers of India

description: IO Islamic 3058 (2). Risâla-i-Râjâwalî, Table of Rulers of India
DOI: 10.5281/zenodo.5971236
title: A formative usability study of workflow management systems in label-free digital pathology - Questionnaires

description: This repository holds the necessary questionnaires, participant data, interview questions and data, as well as a descriptive Readme file that was used for our publication "A formative usability study of workflow management systems in label-free digital pathology" by Markus Jelonek et al. (2022), submitted to F1000Research. Abstract: We present a formative usability study that investigates the usability of different<br> workflow management systems in the field of biomedical data analysis. Specifically, we study a task in the field of so-called label-free digital pathology and investigate one graphical user interface based workflow and one script-based workflow to solve the task. Our main intention is to gain first insights into the systematic study of usability in the context of biomedical image analysis, and formulate experiences and guidelines for future usability studies dealing with workflow management systems. Embedded in a specific setup dealing with label-free digital pathology, the core question behind our contribution is how usability studies for scientific workflow management can be conducted, and how they can be used systematically to improve such tools. Further, we address specific questions about the resource utilisation and management of usability studies, including the recruitment of participants as well as the design of specific workflows to be investigated.
description: This research was funded by the German Research Foundation (DFG), grant number MO 2804/1-1, assigned to Axel Mosig.
DOI: 10.5281/zenodo.5971235
title: A formative usability study of workflow management systems in label-free digital pathology - Questionnaires

description: This repository holds the necessary questionnaires, participant data, interview questions and data, as well as a descriptive Readme file that was used for our publication "A formative usability study of workflow management systems in label-free digital pathology" by Markus Jelonek et al. (2022), submitted to F1000Research. Abstract: We present a formative usability study that investigates the usability of different<br> workflow management systems in the field of biomedical data analysis. Specifically, we study a task in the field of so-called label-free digital pathology and investigate one graphical user interface based workflow and one script-based workflow to solve the task. Our main intention is to gain first insights into the systematic study of usability in the context of biomedical image analysis, and formulate experiences and guidelines for future usability studies dealing with workflow management systems. Embedded in a specific setup dealing with label-free digital pathology, the core question behind our contribution is how usability studies for scientific workflow management can be conducted, and how they can be used systematically to improve such tools. Further, we address specific questions about the resource utilisation and management of usability studies, including the recruitment of participants as well as the design of specific workflows to be investigated.
description: This research was funded by the German Research Foundation (DFG), grant number MO 2804/1-1, assigned to Axel Mosig.
DOI: 10.17027/isric-soilgrids./713396f9-1687-11ea-a7c0-a0481ca9e724
title: SoilGrids250m 2.0 - Bulk density

description: Bulk density (fine earth) in cg/cm³ at 6 standard depths. Predictions were derived using a digital soil mapping approach based on Quantile Random Forest, drawing on a global compilation of soil profile data and environmental layers. To visualize these layers please use www.soilgrids.org.
DOI: 10.5281/zenodo.3585872
title: IO Islamic 3058 (1). Malfûżât-i-Tîmûrî, Tîmûr's Memoirs

description: IO Islamic 3058 (1). Malfûżât-i-Tîmûrî, Tîmûr’s Memoirs
DOI: 10.5281/zenodo.3585871
title: IO Islamic 3058 (1). Malfûżât-i-Tîmûrî, Tîmûr's Memoirs

description: IO Islamic 3058 (1). Malfûżât-i-Tîmûrî, Tîmûr’s Memoirs
DOI: 10.6084/m9.figshare.19114910.v1
title: The high spatial resolution multi-scale daily SPEI raster dataset over China from 1979 to 2018

description: The daily SPEI raster datasets of high spatial resolution in different timescales over China from 1979 to 2018 were developed based on the China Meteorological Forcing Dataset. It has a spatial resolution of 0.1° × 0.1°, a temporal resolution of 1-day, and the timescales of 30-, 90-, and 360-day. All data are in NetCDF format.
DOI: 10.6084/m9.figshare.19121987.v1
title: Data for A novel method for evaluation of the spontaneous imbibition process in tight reservoir rocks: Mathematical model and experimental verification

description: S1 is NMR data for fully-saturated and centrifuged sample; S2 is the volume of imbibed water during imbibition experiment; S3 is NMR T2 distributions for imbibition saturated samples; S4 is the simulation result of imbibition model.
DOI: 10.25550/p-s7dr
title: LacZ staining to determine Cre-recombinase expression pattern in Odam-IRESCre mouse model

description: Using LacZ staining, we analyzed the spatiotemporal expression of Cre-recombinase in newly established Odam-IRESCre mouse driver line. The mice used in this study were Odam-IRESCre+/-/R26R+/+. Control samples were Odam-IRESCre+/-/WT.
DOI: 10.25625/wyyylo
title: Azhar et al parasitoid wasps_ Braconidae_S.N.1/D.BL.BW.TBM

description: Morphospecies richness S, abundance N, diversity 1/D, body size BW and BL, and biomass TBM of Braconid wasps across two seasons from the 2013/14 sampling campaign in all 32 EFForTS core plots in JAmbi, Sumatra, Indonesia.
DOI: 10.6084/m9.figshare.19114844.v1
title: The high spatial resolution multi-scale daily SPI raster dataset over China from 1979 to 2018

description: The daily SPI raster datasets of high spatial resolution in different timescales over China from 1979 to 2018 were developed based on the China Meteorological Forcing Dataset. It has a spatial resolution of 0.1° × 0.1°, a temporal resolution of 1-day, and the timescales of 30-, 90-, and 360-day. All data are in NetCDF format.
DOI: 10.15131/shef.data.19119509
title: 1D model of the human cerebral vasculature: Circle of Willis and leptomeningeal anastomoses

description: The model described here is a 1D representation of the main vessels of a healthy cerebral vascular network. It also includes the leptomeningeal anastomoses, small arterioles that connect the anterior and posterior districts of the brain to the middle one and provide alternative perfusion routes in case of occlusion of a major brain vessel.<br>The network is based on the model of the Circle of Willis published in [1]. Vessels branching from left and right middle cerebral arteries are obtained from [2]. Mechanical and geometrical properties of arteries branching from distal anterior cerebral arteries and from posterior cerebral arteries are derived from [3] and [4]. Vessels are assumed to be straight, narrow tubes that are linearly deformable in their radial direction.<br> <br>The network provided here has been developed for simulations with the software openBF [5]. <i><br></i>This repository contains three files:<br>- 1D_CoW.pdf: contains a graphical representation of the network, with numbered nodes and segmentes. Included is also a table with the radii, length, Young's moduli and windkessel parameters of the model.- CoW_network.yml: input file for openBF simulations. It implementes the network as described in 1D_CoW.pdf.- CoW_inlet.dat: input file for openBF simulations. It describes the inlet flowrate applied at the ascending aorta.<br><i>References</i> [1] Alastruey, J., K. H. Parker, J. Peiro, S. M. Byrd, S. J. Sherwin. Modelling the circle of Willis to assess the effects of anatomical variations and occlusions on cerebral flows. <i>J Biomech</i>. 40(8):1794-1805, 2007 [2] Melis, A., F. Moura, I. Larrabide, K. Janot, R. H. Clayton, A. P. Narata, et al. Improved biomechanical metrics of cerebral vasospasm identified via sensitivity analysis of a 1D cerebral circulation model. <i>J Biomech</i>. 90:24-32, 2019 [3] Blanco, P. J., S. M. Watanabe, M. A. Passos, P. A. Lemos, R. A. Feijoo. An anatomically detailed arterial network model for one-dimensional computational hemodynamics. <i>IEEE Trans Biomed Eng</i>. 62(2):736-753, 2015 [4] Phan, T. G., J. Hilton, R. Beare, V. Srikanth, M. Sinnott. Computer modeling of anterior circulation stroke: proof of concept in cerebrovascular occlusion. <i>Front Neurol</i>. 5:176, 2014 [5] Melis, A. openBF: Julia software for 1D blood flow modelling. Figshare. 2018; doi: https://doi.org/10.15131/shef.data.7166183
DOI: 10.15131/shef.data.19119509.v1
title: 1D model of the human cerebral vasculature: Circle of Willis and leptomeningeal anastomoses

description: The model described here is a 1D representation of the main vessels of a healthy cerebral vascular network. It also includes the leptomeningeal anastomoses, small arterioles that connect the anterior and posterior districts of the brain to the middle one and provide alternative perfusion routes in case of occlusion of a major brain vessel.<br>The network is based on the model of the Circle of Willis published in [1]. Vessels branching from left and right middle cerebral arteries are obtained from [2]. Mechanical and geometrical properties of arteries branching from distal anterior cerebral arteries and from posterior cerebral arteries are derived from [3] and [4]. Vessels are assumed to be straight, narrow tubes that are linearly deformable in their radial direction.<br> <br>The network provided here has been developed for simulations with the software openBF [5]. <i><br></i>This repository contains three files:<br>- 1D_CoW.pdf: contains a graphical representation of the network, with numbered nodes and segmentes. Included is also a table with the radii, length, Young's moduli and windkessel parameters of the model.- CoW_network.yml: input file for openBF simulations. It implementes the network as described in 1D_CoW.pdf.- CoW_inlet.dat: input file for openBF simulations. It describes the inlet flowrate applied at the ascending aorta.<br><i>References</i> [1] Alastruey, J., K. H. Parker, J. Peiro, S. M. Byrd, S. J. Sherwin. Modelling the circle of Willis to assess the effects of anatomical variations and occlusions on cerebral flows. <i>J Biomech</i>. 40(8):1794-1805, 2007 [2] Melis, A., F. Moura, I. Larrabide, K. Janot, R. H. Clayton, A. P. Narata, et al. Improved biomechanical metrics of cerebral vasospasm identified via sensitivity analysis of a 1D cerebral circulation model. <i>J Biomech</i>. 90:24-32, 2019 [3] Blanco, P. J., S. M. Watanabe, M. A. Passos, P. A. Lemos, R. A. Feijoo. An anatomically detailed arterial network model for one-dimensional computational hemodynamics. <i>IEEE Trans Biomed Eng</i>. 62(2):736-753, 2015 [4] Phan, T. G., J. Hilton, R. Beare, V. Srikanth, M. Sinnott. Computer modeling of anterior circulation stroke: proof of concept in cerebrovascular occlusion. <i>Front Neurol</i>. 5:176, 2014 [5] Melis, A. openBF: Julia software for 1D blood flow modelling. Figshare. 2018; doi: https://doi.org/10.15131/shef.data.7166183
DOI: 10.5281/zenodo.5971766
title: Supplementary data for "Many-Body van der Waals Interactions in Wet MoS2 Surfaces"

description: Supplementary data for "Many-Body van der Waals Interactions in Wet MoS2 Surfaces"
DOI: 10.5517/ccdc.csd.cc223fxk
title: CSD 1909938: Experimental Crystal Structure Determination

description: Related Article: Sheng Huang|2019|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28sh8v
title: CCDC 2108907: Experimental Crystal Structure Determination

description: Related Article: Nadia G. Léonard, Teera Chantarojsiri, Joseph W. Ziller, Jenny Y. Yang|2022|J.Am.Chem.Soc.|144|1503|doi:10.1021/jacs.1c09583
DOI: 10.5517/ccdc.csd.cc28sh9w
title: CCDC 2108908: Experimental Crystal Structure Determination

description: Related Article: Nadia G. Léonard, Teera Chantarojsiri, Joseph W. Ziller, Jenny Y. Yang|2022|J.Am.Chem.Soc.|144|1503|doi:10.1021/jacs.1c09583
DOI: 10.5517/ccdc.csd.cc28kffq
title: CCDC 2102123: Experimental Crystal Structure Determination

description: Related Article: Diogo L. Poeira, Ana Cláudia R. Negrão, Hélio Faustino, Jaime A. S. Coelho, Clara S. B. Gomes, Pedro M. P. Gois, M. Manuel B. Marques|2022|Org.Lett.|24|776|doi:10.1021/acs.orglett.1c04312
DOI: 10.5517/ccdc.csd.cc28kfgr
title: CCDC 2102124: Experimental Crystal Structure Determination

description: Related Article: Diogo L. Poeira, Ana Cláudia R. Negrão, Hélio Faustino, Jaime A. S. Coelho, Clara S. B. Gomes, Pedro M. P. Gois, M. Manuel B. Marques|2022|Org.Lett.|24|776|doi:10.1021/acs.orglett.1c04312
DOI: 10.5517/ccdc.csd.cc28kfhs
title: CCDC 2102125: Experimental Crystal Structure Determination

description: Related Article: Diogo L. Poeira, Ana Cláudia R. Negrão, Hélio Faustino, Jaime A. S. Coelho, Clara S. B. Gomes, Pedro M. P. Gois, M. Manuel B. Marques|2022|Org.Lett.|24|776|doi:10.1021/acs.orglett.1c04312
DOI: 10.5517/ccdc.csd.cc28kfjt
title: CCDC 2102126: Experimental Crystal Structure Determination

description: Related Article: Diogo L. Poeira, Ana Cláudia R. Negrão, Hélio Faustino, Jaime A. S. Coelho, Clara S. B. Gomes, Pedro M. P. Gois, M. Manuel B. Marques|2022|Org.Lett.|24|776|doi:10.1021/acs.orglett.1c04312
DOI: 10.5281/zenodo.5924930
title: Eocene to Oligocene vegetation and climate in the Tasmanian Gateway region controlled by changes in ocean currents and pCO2

description: Datasets accompanying Eocene to Oligocene vegetation and climate in the Tasmanian Gateway region controlled by changes in ocean currents and pCO2 by Amoo et al. Supplementary table S1: Raw palynomorph assemblage data, total counts, ODP Site 1172 Supplementary table S2: Sporomorph-based climate estimates including MAT, WMMT, CMMT and MAP Supplementary table S3: Sporomorph diversity indices
DOI: 10.5281/zenodo.5531219
title: Eocene to Oligocene vegetation and climate in the Tasmanian Gateway region controlled by changes in ocean currents and pCO2

description: Datasets accompanying Eocene to Oligocene vegetation and climate in the Tasmanian Gateway region controlled by changes in ocean currents and pCO2 by Amoo et al. Supplementary table S1: Raw palynomorph assemblage data, total counts, ODP Site 1172 Supplementary table S2: Sporomorph-based climate estimates including MAT, WMMT, CMMT and MAP Supplementary table S3: Sporomorph diversity indices
DOI: 10.5281/zenodo.5969348
title: Extra Data for "Analyzing Phylogenetic Trees with a Tree Lattice Coordinate System and a Graph Polynomial"

description: This dataset includes extra data generated or used in the experiments of the paper "Analyzing Phylogenetic Trees with a Tree Lattice Coordinate System and a Graph Polynomial".
DOI: 10.5281/zenodo.5969347
title: Extra Data for "Analyzing Phylogenetic Trees with a Tree Lattice Coordinate System and a Graph Polynomial"

description: This dataset includes extra data generated or used in the experiments of the paper "Analyzing Phylogenetic Trees with a Tree Lattice Coordinate System and a Graph Polynomial".
DOI: 10.6084/m9.figshare.14768967.v1
title: Required data for MS# 2021JF006304

description: Those uploaded files are required data for manuscript MS# 2021JF006304.