cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22578793
title: Transcriptional control of pancreatic cancer immunosuppression by metabolic enzyme CD73 in a tumor-autonomous and -autocrine manner

description: Cancer cell metabolism contributes to the establishment of an immunosuppressive tumor microenvironment. Aberrant expression of CD73, a critical enzyme in ATP metabolism, on the cell surface results in the extracellular accumulation of adenosine, which exhibits direct inhibitory effects on tumor-infiltrating lymphocytes. However, little is known about the influence of CD73 on negative immune regulation-associated signaling molecules and transduction pathways inside tumor cells. This study aims to demonstrate the moonlighting functions of CD73 in immunosuppression in pancreatic cancer, an ideal model characterized by complex crosstalk among cancer metabolism, immune microenvironment, and immunotherapeutic resistance. The synergistic effect of CD73-specific drugs in combination with immune checkpoint blockade is observed in multiple pancreatic cancer models. Cytometry by time-of-flight analysis shows that CD73 inhibition reduces tumor-infiltrating Tregs in pancreatic cancer. Tumor cell-autonomous CD73 is found to facilitate Treg recruitment, in which CCL5 was identified as a crucial downstream effector of CD73 using integrated proteomic and transcriptomic analyses. CD73 transcriptionally upregulates CCL5 through tumor cell-autocrine adenosine–Adora2a signaling-mediated activation of the p38–STAT1 axis, recruiting Tregs to pancreatic tumors and causing an immunosuppressive microenvironment. Together, this study highlights that CD73–adenosine metabolism transcriptionally controls pancreatic cancer immunosuppression in a tumor-autonomous and -autocrine manner.
DOI: 10.6084/m9.figshare.22590235.v1
title: Reassessment of growth-climate relations indicates the potential for decline across Eurasian boreal larch forests

description: Data and code for "Reassessment of growth-climate relations indicates the potential for decline over Eurasian boreal larch forests"
DOI: 10.6084/m9.figshare.22590235
title: Reassessment of growth-climate relations indicates the potential for decline across Eurasian boreal larch forests

description: Data and code for "Reassessment of growth-climate relations indicates the potential for decline over Eurasian boreal larch forests"
DOI: 10.6084/m9.figshare.23446253
title: A 3-D azimuthal anisotropic Vs model from the Juan de Fuca ridge to the Cascadia subduction

description: A 3-D azimuthal anisotropic Vs model from the Juan de Fuca ridge to the Cascadia subduction.
DOI: 10.6084/m9.figshare.23446253.v1
title: A 3-D azimuthal anisotropic Vs model from the Juan de Fuca ridge to the Cascadia subduction

description: A 3-D azimuthal anisotropic Vs model from the Juan de Fuca ridge to the Cascadia subduction.
DOI: 10.5281/zenodo.8019703
title: Long read isoforms with A-to-I edits for H1975 cell line

description: FLAIR2 was used to determine isoform models sequenced from H1975 cells using R2C2 cDNA nanopore sequencing. RNA sequence variants observed in the data were called with longshot and integrated into FLAIR2 isoform models.
DOI: 10.25919/dxqt-7g38
title: Parkes observations for project P574 semester 2023APRS_02

description: We request time to observe 260 pulsars on a regular basis in order to provide the accurate ephemerides necessary for the detection and characterisation of gamma-ray pulsars with the Fermi satellite. The main science goals are to increase the number of known gamma-ray pulsars (both radio loud and radio quiet), to determine accurate pulse profiles, and to characterise their high energy (phase-resolved) spectra. In the radio, the observations will also allow us to investigate: neutron stars and pulsar emission via detecting glitches and determining pulse timing parameters; and the ISM via measuring and monitoring dispersion measures, Faraday rotation measures, and scintillation. To date, we are (co-)authors on over 95 papers arising from the collaboration and P574 data, including four which use UWL observations. The data have contributed to the PhD theses of students from Bordeaux, Manchester, Oxford, Stanford, and Swinburne.
DOI: 10.6084/m9.figshare.23395775
title: <strong>TNF-α-positive patients with recurrent pregnancy loss：the Etiology and Management</strong>

description: Analyzed the association of TNF-α with the induction of RPL-related features. In TNF-α-positive patients with RPL, the use of TNF-α inhibitors improved pregnancy outcomes.
DOI: 10.6084/m9.figshare.23395775.v1
title: <strong>TNF-α-positive patients with recurrent pregnancy loss：the Etiology and Management</strong>

description: Analyzed the association of TNF-α with the induction of RPL-related features. In TNF-α-positive patients with RPL, the use of TNF-α inhibitors improved pregnancy outcomes.
DOI: 10.25919/73jh-cd23
title: Parkes observations for project P1183 semester 2023APRS_07

description: A new energetic repeating FRB 20220529 can be observed by both FAST and Parkes telescopes and the simultaneous observing time is up to one hour. We have observed this source using Parkes UWL green time and in total 21 bursts have been detected. Two bursts of them have the corresponding simultaneous FAST observations. Only one burst has 4-pol datasets and is bright enough to analyse the polarization properties. Therefore, we propose to continue the monitoring of the source of FRB 20220529 using the Parkes UWL with high-time resolution and 4-pol observation. The new proposed observation aims to: (1)detect more bursts by Parkes UWL with full polarization information; (2) detect more bursts by Parkes UWL with corresponding simultaneous FAST observations; (3) study the radiation spectrum by more bursts detected in simultaneous observations of Parkes and FAST; (4) study the burst microstructure using high time resolution datasets, and (5) study the frequency ranges changes of the repeating bursts.
DOI: 10.6084/m9.figshare.23387144
title: GWAS DATA

description: Piglet birth weight
DOI: 10.5281/zenodo.8019777
title: Rhythm control and cardiovascular or cerebrovascular out-comes in patients with atrial fibrillation: A study of the CODE-AF registry

description: <strong>SUPPLEMENTARY MATERIAL</strong> <strong><em>Rhythm control and cardiovascular or cerebrovascular outcomes in patients with atrial fibrillation: A study of the CODE-AF registry</em></strong> Ho Gi Chung, MD; Junbeom Park; Jin-Kyu Park; Ki-Woon Kang; Jaemin Shim; Jin-Bae Kim; Jun Kim; Eue-Keun Choi; Hyung Wook Park; Young Soo Lee; Boyoung Joung <strong>Supplementary Table 1.</strong> Subgroup analysis of primary outcome in rate- and rhythm-control group before overlap weighting. <strong>Supplementary Figure 1. </strong>Cumulative incidence of primary outcome in rhythm and rate control treatment groups before overlap weighting. <strong>Supplementary Figure 2. </strong>Cumulative incidence of secondary outcomes in rhythm and rate control treatment groups before overlap weighting.
DOI: 10.5281/zenodo.8019776
title: Rhythm control and cardiovascular or cerebrovascular out-comes in patients with atrial fibrillation: A study of the CODE-AF registry

description: <strong>SUPPLEMENTARY MATERIAL</strong> <strong><em>Rhythm control and cardiovascular or cerebrovascular outcomes in patients with atrial fibrillation: A study of the CODE-AF registry</em></strong> Ho Gi Chung, MD; Junbeom Park; Jin-Kyu Park; Ki-Woon Kang; Jaemin Shim; Jin-Bae Kim; Jun Kim; Eue-Keun Choi; Hyung Wook Park; Young Soo Lee; Boyoung Joung <strong>Supplementary Table 1.</strong> Subgroup analysis of primary outcome in rate- and rhythm-control group before overlap weighting. <strong>Supplementary Figure 1. </strong>Cumulative incidence of primary outcome in rhythm and rate control treatment groups before overlap weighting. <strong>Supplementary Figure 2. </strong>Cumulative incidence of secondary outcomes in rhythm and rate control treatment groups before overlap weighting.
DOI: 10.6084/m9.figshare.23448212
title: IEEE300DCDRUC.xlsx

description: unit commitment
DOI: 10.6084/m9.figshare.23448212.v1
title: IEEE300DCDRUC.xlsx

description: unit commitment
DOI: 10.5281/zenodo.8019801
title: 324a6207-70bd-4a59-be2b-25001d1af9e3

description: These data sets are one of the workflows in ddbj/workflow-registry.
DOI: 10.5281/zenodo.8019800
title: 324a6207-70bd-4a59-be2b-25001d1af9e3

description: These data sets are one of the workflows in ddbj/workflow-registry.
DOI: 10.5281/zenodo.7992276
title: Mapping surface flaws on float glass through Fourier ptychographic quantitative phase imaging

description: This dataset contains the 0.7 GP quantitative phase map described in the paper "Mapping surface flaws on float glass through Fourier ptychographic quantitative phase imaging". The phase map can be loaded and visualized in Matlab. Note that the file is large (&gt;20 GB) and requires sufficient RAM to be loaded. The pixel size of the phase map is 542 nm.
DOI: 10.5281/zenodo.7992275
title: Mapping surface flaws on float glass through Fourier ptychographic quantitative phase imaging

description: This dataset contains the 0.7 GP quantitative phase map described in the paper "Mapping surface flaws on float glass through Fourier ptychographic quantitative phase imaging". The phase map can be loaded and visualized in Matlab. Note that the file is large (&gt;20 GB) and requires sufficient RAM to be loaded. The pixel size of the phase map is 542 nm.
DOI: 10.6084/m9.figshare.23448619
title: Appendix 6 - Supporting data from Effectiveness of face masks for reducing transmission of SARS-CoV-2: a rapid systematic review

description: This rapid systematic review of evidence asks whether (i) wearing a face mask, (ii) one type of mask over another and (iii) mandatory mask policies can reduce the transmission of SARS-CoV-2 infection, either in community-based or healthcare settings. A search of studies published 1 January 2020–27 January 2023 yielded 5185 unique records. Due to a paucity of randomized controlled trials (RCTs), observational studies were included in the analysis. We analysed 35 studies in community settings (3 RCTs and 32 observational) and 40 in healthcare settings (1 RCT and 39 observational). Ninety five per cent of studies included were conducted before highly transmissible Omicron variants emerged. Ninety one per cent of observational studies were at ‘critical’ risk of bias (ROB) in at least one domain, often failing to separate the effects of masks from concurrent interventions. More studies found that masks (<i>n</i> = 39/48; 81%) and mask mandates (<i>n</i> = 16/18; 89%) reduced infection than found no effect (<i>n</i> = 8/66; 12%) or favoured controls (<i>n</i> = 2/66; 3%). Seven observational studies found that respirators were more protective than surgical masks, while five found no statistically significant difference between the two mask types. Despite the ROB, and allowing for uncertain and variable efficacy, we conclude that wearing masks, wearing higher quality masks (respirators), and mask mandates generally reduced SARS-CoV-2 transmission in these study populations.This article is part of the theme issue 'The effectiveness of non-pharmaceutical interventions on the Covid-19 pandemic: the evidence'.
DOI: 10.6084/m9.figshare.23448619.v1
title: Appendix 6 - Supporting data from Effectiveness of face masks for reducing transmission of SARS-CoV-2: a rapid systematic review

description: This rapid systematic review of evidence asks whether (i) wearing a face mask, (ii) one type of mask over another and (iii) mandatory mask policies can reduce the transmission of SARS-CoV-2 infection, either in community-based or healthcare settings. A search of studies published 1 January 2020–27 January 2023 yielded 5185 unique records. Due to a paucity of randomized controlled trials (RCTs), observational studies were included in the analysis. We analysed 35 studies in community settings (3 RCTs and 32 observational) and 40 in healthcare settings (1 RCT and 39 observational). Ninety five per cent of studies included were conducted before highly transmissible Omicron variants emerged. Ninety one per cent of observational studies were at ‘critical’ risk of bias (ROB) in at least one domain, often failing to separate the effects of masks from concurrent interventions. More studies found that masks (<i>n</i> = 39/48; 81%) and mask mandates (<i>n</i> = 16/18; 89%) reduced infection than found no effect (<i>n</i> = 8/66; 12%) or favoured controls (<i>n</i> = 2/66; 3%). Seven observational studies found that respirators were more protective than surgical masks, while five found no statistically significant difference between the two mask types. Despite the ROB, and allowing for uncertain and variable efficacy, we conclude that wearing masks, wearing higher quality masks (respirators), and mask mandates generally reduced SARS-CoV-2 transmission in these study populations.This article is part of the theme issue 'The effectiveness of non-pharmaceutical interventions on the Covid-19 pandemic: the evidence'.
DOI: 10.6084/m9.figshare.23448625
title: Supporting data - Figures 2-4 from Effectiveness of face masks for reducing transmission of SARS-CoV-2: a rapid systematic review

description: This rapid systematic review of evidence asks whether (i) wearing a face mask, (ii) one type of mask over another and (iii) mandatory mask policies can reduce the transmission of SARS-CoV-2 infection, either in community-based or healthcare settings. A search of studies published 1 January 2020–27 January 2023 yielded 5185 unique records. Due to a paucity of randomized controlled trials (RCTs), observational studies were included in the analysis. We analysed 35 studies in community settings (3 RCTs and 32 observational) and 40 in healthcare settings (1 RCT and 39 observational). Ninety five per cent of studies included were conducted before highly transmissible Omicron variants emerged. Ninety one per cent of observational studies were at ‘critical’ risk of bias (ROB) in at least one domain, often failing to separate the effects of masks from concurrent interventions. More studies found that masks (<i>n</i> = 39/48; 81%) and mask mandates (<i>n</i> = 16/18; 89%) reduced infection than found no effect (<i>n</i> = 8/66; 12%) or favoured controls (<i>n</i> = 2/66; 3%). Seven observational studies found that respirators were more protective than surgical masks, while five found no statistically significant difference between the two mask types. Despite the ROB, and allowing for uncertain and variable efficacy, we conclude that wearing masks, wearing higher quality masks (respirators), and mask mandates generally reduced SARS-CoV-2 transmission in these study populations.This article is part of the theme issue 'The effectiveness of non-pharmaceutical interventions on the Covid-19 pandemic: the evidence'.
DOI: 10.6084/m9.figshare.23448625.v1
title: Supporting data - Figures 2-4 from Effectiveness of face masks for reducing transmission of SARS-CoV-2: a rapid systematic review

description: This rapid systematic review of evidence asks whether (i) wearing a face mask, (ii) one type of mask over another and (iii) mandatory mask policies can reduce the transmission of SARS-CoV-2 infection, either in community-based or healthcare settings. A search of studies published 1 January 2020–27 January 2023 yielded 5185 unique records. Due to a paucity of randomized controlled trials (RCTs), observational studies were included in the analysis. We analysed 35 studies in community settings (3 RCTs and 32 observational) and 40 in healthcare settings (1 RCT and 39 observational). Ninety five per cent of studies included were conducted before highly transmissible Omicron variants emerged. Ninety one per cent of observational studies were at ‘critical’ risk of bias (ROB) in at least one domain, often failing to separate the effects of masks from concurrent interventions. More studies found that masks (<i>n</i> = 39/48; 81%) and mask mandates (<i>n</i> = 16/18; 89%) reduced infection than found no effect (<i>n</i> = 8/66; 12%) or favoured controls (<i>n</i> = 2/66; 3%). Seven observational studies found that respirators were more protective than surgical masks, while five found no statistically significant difference between the two mask types. Despite the ROB, and allowing for uncertain and variable efficacy, we conclude that wearing masks, wearing higher quality masks (respirators), and mask mandates generally reduced SARS-CoV-2 transmission in these study populations.This article is part of the theme issue 'The effectiveness of non-pharmaceutical interventions on the Covid-19 pandemic: the evidence'.
DOI: 10.6084/m9.figshare.23448628
title: Appendix 2 - Excluded studies from Effectiveness of face masks for reducing transmission of SARS-CoV-2: a rapid systematic review

description: This rapid systematic review of evidence asks whether (i) wearing a face mask, (ii) one type of mask over another and (iii) mandatory mask policies can reduce the transmission of SARS-CoV-2 infection, either in community-based or healthcare settings. A search of studies published 1 January 2020–27 January 2023 yielded 5185 unique records. Due to a paucity of randomized controlled trials (RCTs), observational studies were included in the analysis. We analysed 35 studies in community settings (3 RCTs and 32 observational) and 40 in healthcare settings (1 RCT and 39 observational). Ninety five per cent of studies included were conducted before highly transmissible Omicron variants emerged. Ninety one per cent of observational studies were at ‘critical’ risk of bias (ROB) in at least one domain, often failing to separate the effects of masks from concurrent interventions. More studies found that masks (<i>n</i> = 39/48; 81%) and mask mandates (<i>n</i> = 16/18; 89%) reduced infection than found no effect (<i>n</i> = 8/66; 12%) or favoured controls (<i>n</i> = 2/66; 3%). Seven observational studies found that respirators were more protective than surgical masks, while five found no statistically significant difference between the two mask types. Despite the ROB, and allowing for uncertain and variable efficacy, we conclude that wearing masks, wearing higher quality masks (respirators), and mask mandates generally reduced SARS-CoV-2 transmission in these study populations.This article is part of the theme issue 'The effectiveness of non-pharmaceutical interventions on the Covid-19 pandemic: the evidence'.
DOI: 10.6084/m9.figshare.23448628.v1
title: Appendix 2 - Excluded studies from Effectiveness of face masks for reducing transmission of SARS-CoV-2: a rapid systematic review

description: This rapid systematic review of evidence asks whether (i) wearing a face mask, (ii) one type of mask over another and (iii) mandatory mask policies can reduce the transmission of SARS-CoV-2 infection, either in community-based or healthcare settings. A search of studies published 1 January 2020–27 January 2023 yielded 5185 unique records. Due to a paucity of randomized controlled trials (RCTs), observational studies were included in the analysis. We analysed 35 studies in community settings (3 RCTs and 32 observational) and 40 in healthcare settings (1 RCT and 39 observational). Ninety five per cent of studies included were conducted before highly transmissible Omicron variants emerged. Ninety one per cent of observational studies were at ‘critical’ risk of bias (ROB) in at least one domain, often failing to separate the effects of masks from concurrent interventions. More studies found that masks (<i>n</i> = 39/48; 81%) and mask mandates (<i>n</i> = 16/18; 89%) reduced infection than found no effect (<i>n</i> = 8/66; 12%) or favoured controls (<i>n</i> = 2/66; 3%). Seven observational studies found that respirators were more protective than surgical masks, while five found no statistically significant difference between the two mask types. Despite the ROB, and allowing for uncertain and variable efficacy, we conclude that wearing masks, wearing higher quality masks (respirators), and mask mandates generally reduced SARS-CoV-2 transmission in these study populations.This article is part of the theme issue 'The effectiveness of non-pharmaceutical interventions on the Covid-19 pandemic: the evidence'.
DOI: 10.17031/64771292116ed
title: 2015 - 2017 Community Seagrass Initiative (CSI) South Coast Cornwall, Devon and Dorset Seagrass Transect Survey

description: The Community Seagrass Initiative is a citizen science lead monitoring programme. It focusses on sub-tidal seagrass beds in the South West of England between Looe in Cornwall and Weymouth in Dorset. There are 19 beds surveyed by the project in total, some, but not all, fall within the boundaries of designated Marine Protected Areas (MPA's). Data on seagrass shoot density, fauna counts on a very broad sale, and presence/absence of some Biodiversity Action Plan (BAP) and commercial fisheries species. Data is collected by volunteer divers that don't necessarily have previous marine biological surveying experience. They have been trained by the project on the surveying and animal identification skills required.
DOI: 10.6084/m9.figshare.23448946
title: Supplementary material from The evasive truth: do mere exposures at the subliminal and supraliminal levels drive the illusory truth effect?

description: The subjective truth of a statement is boosted by mere exposure to itself or a part of itself. This phenomenon is referred to as the <i>illusory truth effect</i>. We examined whether subliminal pre-exposure to the statement topic would increase its subjective truth. In the exposure phase, participants observed the topic, which was presented supraliminally or subliminally. After the exposure phase, they rated the subjective truth of the statement. If unconscious processing contributed to the illusory truth effect, subliminal exposure to the topic would increase the subjective truth of the statement. On the other hand, if the illusory truth effect required conscious and controlled processing, increases in the subjective truth of a statement would be induced only by supraliminal exposure to the topic. The results showed that the illusory truth effect was not found in either supraliminal or subliminal groups. Our findings provide no reliable evidence that pre-exposure to the statement topic saliently promotes its subjective truth.
DOI: 10.6084/m9.figshare.23448946.v1
title: Supplementary material from The evasive truth: do mere exposures at the subliminal and supraliminal levels drive the illusory truth effect?

description: The subjective truth of a statement is boosted by mere exposure to itself or a part of itself. This phenomenon is referred to as the <i>illusory truth effect</i>. We examined whether subliminal pre-exposure to the statement topic would increase its subjective truth. In the exposure phase, participants observed the topic, which was presented supraliminally or subliminally. After the exposure phase, they rated the subjective truth of the statement. If unconscious processing contributed to the illusory truth effect, subliminal exposure to the topic would increase the subjective truth of the statement. On the other hand, if the illusory truth effect required conscious and controlled processing, increases in the subjective truth of a statement would be induced only by supraliminal exposure to the topic. The results showed that the illusory truth effect was not found in either supraliminal or subliminal groups. Our findings provide no reliable evidence that pre-exposure to the statement topic saliently promotes its subjective truth.