cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/k957gctr9d
title: Introductory Guide: Calculating a deprivation index using census data

description: Deprivation indexes have widespread use in academic research and in local and national government applications. It is useful for people to understand their construction and to be able to calculate their own measures. We provide an overview of the background to area based deprivation measures. We detail and explain a series of steps taken to calculate a deprivation index for small areas in Australia. We use data from Australia’s 2016 Census of Population and Housing for the SA2 level of geography. After defining the set of variables used as inputs, we emulate the steps taken to calculate other census based deprivation indexes. The resulting scheme correlates closely with an official, but more sophisticated deprivation measure, suggesting that simple schemes have utility. There are choices to be made for input variables and for some of the detail of the calculations. Researchers can follow the steps we describe to develop their own measures. The files we provide here will enable people to reproduce the deprivation measures in SPSS, R and Stata.
DOI: 10.17632/3rb8xf35d2
title: LINF_130014000

description: Leucine-rich repeat (LRR)-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/jx5tddtcs6
title: Health Insurance Dataset

description: This dataset contains information about more than 1300 beneficiaries
DOI: 10.17632/nwhd3w9w5x
title: data set MOLECULAR-CELL-D-22-00018

description: Microscopy images and immunoblotting membranes
DOI: 10.17632/5b38g36z9v
title: Retinoic Acid Enhances HIV-1 Reverse Transcription and Transcription in Macrophages via mTOR-Modulated Mechanisms

description: Monocyte-derived macrophages (MDMs) were generated from monocytes of HIV-uninfected individuals in the presence or the absence of all trans retinoic acid (ATRA). MDMs were tested by western blotting for the expression of mTOR, S6K, and SAMHD1 protein expression/phosphorylation, as well as TCF4 protein expression.

This file is linked to the manuscript entitled "Retinoic Acid Boosts HIV-1 Replication in Macrophages via CCR5/SAMHD1-Dependent and mTOR-Modulated Mechanisms" by Jonathan Dias, Petronela Ancuta et al., submitted for publication October 5th, 2023 (reprint available on www.BioRxiv.org)
DOI: 10.17632/mrmfyt2mv5
title: A contactless monitoring system for accurately predicting walking energy expenditure based on an ensemble neural network

description: The monitoring of walking energy expenditure (EE) plays an important role in health evaluations and management. Here, we present a datasets to develop a ensemble neural network model for accurately predicting walking EE of younger and older adults and stroke survivors. The datasets including original data, processed data, mechine learning model, ensemble neural network model and the Leave-One-Out Cross-Validation results.
DOI: 10.4121/14980293.v1
title: Self-objectification as Predictor of Body Surveillance and Body Shame

description: The data sets were of use in a study entitled "State Mindfulness as Mediator of the Predictive Relationships Between Self-objectification, Body Surveillance, and Body Shame." They are also being used in a new study, incorporating novel information of the research findings entitled "Self-objectification as Predictor of Body Surveillance and Body Shame." Each of the studies were a quantitative correlational study and the data was collected through use of a survey available on Survey Monkey. A month into the data collection procedure, permissions were granted by Survey Monkey to make use of their targeted audience feature to expedite the data collection process. The data made use of validated scales to measure the variables of state mindfulness (state mindfulness scale for physical activity), self-objectification (self-objectification beliefs and behaviors scale), and body surveillance and body shame (objectified body consciousness scale).<br>
DOI: 10.17632/m3y4jncvch
title: Data for: Time-in-space analysis of multidimensional phenomena

description: Data from the last two demographic censuses carried out in Brazil (years 2000 and 2010).
Cities: Apucarana, Foz do Iguaçu, Guarapuava, Londrina, Maringá-Sarandi-Paiçandu, Ponta Grossa e Toledo. 
State of Paraná, Brazil.

Code - Indicator
DM1 - Inhabitants per household
DM2 - Heads between 10 and 19 years old
DM3 - Dependency ratio
DM4 - Up to one year old
EC1 - Heads Without Income
EC2 - Heads with more than 20 minimum wages
EC3 - Heads with up to 02 minimum wages
ED1 - Illiterate people (10-14 years old)
ED2 - Illiterate household heads
HS1 - Household without bathroom
HS2 - Households with 04 bathrooms or more
HS3 - Households connected to the sewage network
HS4 - Households connected to the general-water network
HS5 - Rented or leased households

Data from: Google
EN1 - Vegetation Coverage (NDVI)
DOI: 10.17632/grdvwrnkv6
title: Kurdish Dataset for Fake News Detection (KDFND)

description: Famous Kurdish news websites, which is officially recognized by the Kurdistan Journal Syndicate and Facebook pages were used to scrape articles. Three separate Kurdistan cities are covered by the public websites. The Kurdistan Regional Government of Iraq's three cities are Erbil, Sulaimani, and Halabja. The news articles are written in Kurdish. This dataset is also notable for being the first and largest in the Kurdish language to concentrate on the Sorani dialect. Over the course of a year, articles were scraped daily from the preset public news sources using Python scripts. The articles were scraped using Facepager, Web Scraper, and Python tools. We eliminated all duplicate articles. Because there was no fact-checked platform in Kurdish at the time, articles from public news sources were also gathered from various news sources and social media pages. 
Each public news source was divided into two categories based on the annotation criteria for the articles in the dataset: Fake or Real. Each story that was labeled was given a designation based on its public source category, the Kurdistan Journalist Syndicate's guidelines for Kurdish journalism, and various additional criteria based on social media platforms.
DOI: 10.17632/vwrrdmryd6
title: Simulating Land Cover Changes and It’s Impacts on Land Surface Temperature: A Case Study in Rajshahi, Bangladesh

description: Land Surface Temperature (LST) has been used to investigate the effects of changing land cover on climate. The importance of surface temperature in a range of earth science concerns and themes, such as urban climatology, human-environment interactions, and global environmental change, cannot be overstated. Its impact will be more in the monsoon areas, because the rainfall is unpredictable, failure of monsoon and there will be heavy down pour of rainfall. LST for Rajshahi division, Bangladesh, is derived using ArcGIS software from images of Landsat 8 Optical Land Imager (OLI) data of 30 m resolution and Thermal Infrared Sensor (TIR) data of 100 m resolution, as well as data from Landsat-5 Thematic MAPPER (TM) satellites. A total time span of 15 years, starting from 2005 to 2020 is selected. Land cover map, Land Surface temperature, Normalized Difference vegetation Index (NDVI) and Normalized Difference Water Index (NDWI) are calculated at every 5 years interval starting from 2005. The digital number of thermal infrared band is converted into spectral radiance using the equation supplied by the Landsat user's guidebook. The effective at sensor brightness temperature is obtained from the spectral radiance using Plank's inverse function. The final LST is computed using surface emissivity based on NDVI classes. according to the study, LST is increasing with the passage of time. The northwest parts of the Rajshahi division have the highest LST values. LST and NDVI are found to have a considerable positive correlation. The study shows the increase in vegetation reduces LST and the decrease of vegetation is responsible for increased LST. Also, bare soil, built-up area, waterbody is responsible for controlling LST. From the land cover map, it is visible that, bare soil and water body has a slight effect on LST but on the other hand, LST increases with growing of built-up area. The spatial distribution statistics of Land cover map, LST, and NDVI can be used as a guideline for urban planning, methods for improving the quality of the urban environment and a possible solution for diminishing of LST.
DOI: 10.17632/dnryw89c68
title: RNA-seq data from paper "Coagulation factor FVII fine-tunes hepatic steatosis by blocking AKT-CD36-mediated fatty acid uptake"

description: RNA-seq data from paper "Coagulation factor FVII fine-tunes hepatic steatosis by blocking AKT-CD36-mediated fatty acid uptake"
DOI: 10.6084/m9.figshare.23668272.v1
title: Supplementary Material for: Genome-Wide Association Studies for Albuminuria of non-Diabetic Taiwanese Population

description: Background Chronic renal disease (CKD), defined by reduced estimated glomerular filtration rate (eGFR) and albuminuria, imposes huge health burden worldwide. Ethnicity-specific associations were frequently observed in genome-wide association studies (GWAS). In this research, we conducted GWAS of albuminuria in the non-diabetic population of Taiwan. Subjects and Methods Non-diabetic individuals aged 30 to 70 years and without cancer history were enrolled from the Taiwan Biobank. A total of 6,768 subjects received spot urine examination. After quality control with PLINK and imputation with SHAPEIT and IMPUTE2, a total of 3,638,350 single nucleotide polymorphisms (SNPs) remained for testing. SNPs with minor allele frequency low than 0.1% were excluded. We applied linear regression for analyzing associations between SNPs and log UACR. Results We identified six loci in or near the FCRL3 (P = 2.56 × 10−6), TMEM161(P = 4.43 × 10−6), EFCAB1 (P = 2.03 × 10−6), ELMOD1 (P = 2.97 × 10−6), RYR3 (P = 1.34 × 10−6), and PIEZO2 (P = 2.19 × 10−7) as candidate. Genetic variants in the FCRL3 gene that encodes a secretory IgA receptor were found to be associated with IgA nephropathy, which might manifest proteinuria. The PIEZO2 gene encodes a sensor for mechanical forces in mesangial cells and renin-producing cells. Conclusion We identified five new loci and one known suggestive loci for albuminuria in the non-diabetic Taiwanese population.
DOI: 10.6084/m9.figshare.12220433.v2
title: Supplementary Material for: Developing Smartphone-Based Objective Assessments of Physical Function in Rheumatoid Arthritis Patients: The PARADE Study

description: <b><i>Background:</i></b> Digital biomarkers that measure physical activity and mobility are of great interest in the assessment of chronic diseases such as rheumatoid arthritis, as it provides insights on patients’ quality of life that can be reliably compared across a whole population. <b><i>Objective:</i></b> To investigate the feasibility of analyzing iPhone sensor data collected remotely by means of a mobile software application in order to derive meaningful information on functional ability in rheumatoid arthritis patients. <b><i>Methods:</i></b> Two objective, active tasks were made available to the study participants: a wrist joint motion test and a walk test, both performed remotely and without any medical supervision. During these tasks, gyroscope and accelerometer time-series data were captured. Processing schemes were developed using machine learning techniques such as logistic regression as well as explicitly programmed algorithms to assess data quality in both tasks. Motion-specific features including wrist joint range of motion (ROM) in flexion-extension (for the wrist motion test) and gait parameters (for the walk test) were extracted from high quality data and compared with subjective pain and mobility parameters, separately captured via the application. <b><i>Results:</i></b> Out of 646 wrist joint motion samples collected, 289 (45%) were high quality. Data collected for the walk test included 2,583 samples (through 867 executions of the test) from which 651 (25%) were high quality. Further analysis of high-quality data highlighted links between reduced mobility and increased symptom severity. ANOVA testing showed statistically significant differences in wrist joint ROM between groups with light-moderate (220 participants) versus severe (36 participants) wrist pain (<i>p</i> &lt; 0.001) as well as in average step times between groups with slight versus moderate problems walking about (<i>p</i> &lt; 0.03). <b><i>Conclusion:</i></b> These findings demonstrate the potential to capture and quantify meaningful objective clinical information remotely using iPhone sensors and represent an early step towards the development of patient-centric digital endpoints for clinical trials in rheumatoid arthritis.
DOI: 10.17632/cfpyvjj7rz
title: LINF_160022900

description: SEDLIN-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/mz8hjgwn7z
title: The gridded meteorological datasets for "Higher Probability of Occurrence of Hotter and Shorter Heat Waves Followed by Heavy Rainfall" (You & Wang et al. 2021; Geophysical Research Letters)

description: This is the daily gridded meteorological dataset pertaining to the following research paper: "Higher Probability of Occurrence of Hotter and Shorter Heat Waves Followed by Heavy Rainfall" (You & Wang et al. 2021; Geophysical Research Letters). It includes daily gridded observations of maximum temperature downloaded at http://101.200.76.197/data/cdcdetail/dataCode/SURF_CLI_CHN_TEM_DAY_GRID_0.5.html and precipitation deposited in http://101.200.76.197/data/cdcdetail/dataCode/SURF_CLI_CHN_PRE_DAY_GRID_0.5.html. The outputs used in the paper as well as the source data provided by China Meteorological Data Service Center are both uploaded.
DOI: 10.6084/m9.figshare.4737358.v1
title: Slingsby_TaylorPlots

description: Supplementary Data and R Markdown workflows for Slingsby et al. "Intensifying post-fire weather and biological invasion drive species loss in a Mediterranean-type biodiversity hotspot"<br>All data and repeatable R code workflows (R Markdown) used in the study are available here or as SI Datasets. Code and data are provided under the MIT license, but where possible we would appreciate users acknowledging "the South African Environmental Observation Network (SAEON) and partners" and citing this paper and/or the original data source outlined in the paper. We would also see it as a courtesy to inform the lead author of your intended use of the data. Co-authorship is not a prerequisite, but we would like to minimize duplication of effort and/or warn users where their plans for the data do not seem appropriate.
DOI: 10.17632/6x263rcdhd
title: Dataset: Subgrade Soil Characterization Data - Sincelejo, Sucre, Colombia

description: This data relates the properties of soils characteristic of a region in northern Colombia. A total of 46 representative samples were collected from different sites in the city of Sincelejo and analyzed in the laboratory, to determine their physical and mechanical properties.
DOI: 10.6084/m9.figshare.19314290.v1
title: ROC

description: <b>‘</b><b>Russia as a Christ-Loving Warrior? Only when Convenient!’: the Subject of the Protection of Christians in Russian Foreign Policy</b>
DOI: 10.17632/k4dbt2f54g
title: Dataset: carbon and nitrogen content in coarse woody debris sampled in northern Brazilian Amazon

description: The dataset provides information on carbon and nitrogen content (%) in coarse woody debris pieces (stem diameter ≥ 10 cm) sampled in two different Protected Areas situated in state of Roraima, northern Brazilian Amazon: Maracá Ecological Station (Maraca) and Viruá National Park (Virua). Both areas are PPBio (Biodiversity Research Program) grids characterized by distinct forest types. Our sampling took into consideration 128 pieces: 56 (Maraca) and 72 (Virua). All pieces were observed/measured in 2008, as specified in Silva, L.F.S.G.; Castilho, C.V.; Cavalcante, C.O.; Pimentel, T.P.; Fearnside, P.M.; Barbosa, R.I. 2016. Production and stock of coarse woody debris across a hydro-edaphic gradient of oligotrophic forests in the northern Brazilian Amazon. Forest Ecology and Management, 364: 1-9 (doi: 10.1016/j.foreco.2015.12.045). Our dataset has a file (carbon_nitrogen_NECROMASS.xlx) where are presented all information for each sampled piece (wood_piece_number), associated to the carbon content (%), nitrogen content (%), taxonomy (family; species), sampling date, etc. The dataset was supported by supported by INPA’s institutional project ‘‘Ecology and Management of Natural Resources of the Roraima Savanna” (PPI-INPA 012/18; 2008–2012) and the Biodiversity Research Program (PPBio Western Amazonia, Manaus). The National Council for Scientific and Technological Development of Brazil provided fellowships for R.I. Barbosa (CNPq 306286/2008-4) and P.M. Fearnside (CNPq 304020/2010-9). L.F.S.G. Silva and C. O. Cavalcante were supported by post-graduate fellowships provided by Brazilian Coordination for the Improvement of Higher Education Personnel (CAPES). The Chico Mendes Institute for Biodiversity Conservation (ICMBio) provided infrastructure and authorization for the study (Authorizations 17398-1 and 17398-2 in 2009; 22576-1 in 2010).
DOI: 10.17632/xwfs6xbk47
title: Human Bone Fractures Multi-modal Image Dataset (HBFMID)

description: Human Bone Fractures Multi-modal Image Dataset (HBFMID) consists of X-ray and MRI images including the elbow, ﬁnger, forearm, humerus, shoulder, femur, shinbone, knee, hipbone, wrist, spinal cord, and some of the healthy bones. The dataset primarily used 641 raw images, including 510 for X-ray and 131 for MRI images. After that, we divided our dataset into three sections: training (449 images), validation(128 images), and testing (64 images). We used annotation techniques to label the image data. The auto-orient, resized the image size to 640 X 640, and made contrast adjustments have been applied for image pre-processing. For augmentation, several techniques like scaling, shifting, shearing, cropping, random rotation, and brightness change are applied. In the augmentation technique, the following parameters were used: Flip (Horizontal, Vertical), Rotation (Between -5◦and +5◦), Shear (±2◦Horizontal, ±2◦Vertical), Saturation (Between -5 % and +5 %), Brightness: (Between -10 % and +10 %), and zooming (2%). After augmentation, we received an augmented image comprising about 1347 (449x3) images. In HBFMID dataset a total of 1539 ((1347:training)+(128: validation)+(64: testing)) images are used.
DOI: 10.17632/3yzbd95r97
title: Hilbert space and structure constants of descendant fields in two-dimensional conformal theories

description: Abstract We have developed an algorithm to compute the Hilbert-space basis and the operator algebra of descendant fields for (1+1)-dimensional conformal field theories. Implemented as a Mathematica computer program, this algorithm is used to obtain nonperturbatively the spectrum of the transfer matrix theories, seen as deformations of a massless conformal theory. Title of program: STRIP Catalogue Id: ABZT_v1_0 Nature of problem To compute the spectrum of the transfer matrix for massive (1+1) dimensional quantum field theories. Versions of this program held in the CPC repository in Mendeley Data ABZT_v1_0; STRIP; 10.1016/0010-4655(91)90009-A This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/zmbpv7x82s
title: Aerodynamic Optimization and Torque Analysis of a Rotating Cross-Slit Cylinder with End Deflector Plate through Frozen Rotor modelling

description: This research focused on optimizing the aerodynamics and analyzing the torque of a rotating cross-slit cylinder equipped with an end deflector plate, utilizing the Frozen Rotor modeling method. The main aim was to improve the cylinder's aerodynamic efficiency and comprehend its torque characteristics, which are crucial in applications like wind-energy harvesting and vehicle aerodynamics. The study assessed how the cross-slit design and deflector plate affected flow separation, drag reduction, and torque generation across different rotational speeds. The frozen-rotor modeling approach was used to simulate the steady-state flow field, effectively capturing the rotational motion's impact and the intricate interactions between the deflector plate and the surrounding airflow. By employing parametric studies and optimization techniques, the study quantified how various design configurations influenced aerodynamic efficiency and torque output. The findings underscore the end deflector plate's pivotal role in altering flow patterns, minimizing drag, and enhancing torque production, offering valuable insights for designing more efficient rotating systems in engineering contexts. The study concludes with a set of optimized design parameters aimed at improving aerodynamic performance in similar fluid-structure interaction scenarios.
Data were collected at various downstream locations (x/D = 15–50) to offer a detailed depiction of the near-field wake dynamics in the presence of deflector plates. The time-averaged flow field highlights the persistence and development of coherent structures formed by the interaction between slit-induced vortices and rotational influences. At x/D = 15 and 20, there was noticeable asymmetry and organized vortex pairs, indicating active vortex shedding affected by the Magnus effect. As the flow progresses downstream (x/D = 25–35), the wake starts to expand and weaken, showing signs of vortex breakdown and energy dissipation. By the time it reaches x/D = 40 and 50, the flow field becomes more diffused, with diminished vorticity intensity and less distinct shear layers. This extended observation confirms that the combination of cross-slit geometry and rotation significantly impacts the wake's stability and structure over time. 
Deflector plates are crucial in reducing wake oscillations and aiding flow recovery. These findings suggest that the design strategy effectively delays wake instabilities and facilitates smoother flow transitions, which are beneficial for applications focused on drag reduction, noise control, and improved aerodynamic performance. Increasing the Reynolds number enhances surface vorticity and three-dimensional flow effects. The angular configuration and slit design greatly affect the wake structure and aerodynamic forces. Cross-slit cylinders surpass traditional designs in lift generation with lower torque penalties.
DOI: 10.6084/m9.figshare.26838880.v2
title: juSPH

description: This repository is the original code for Paper: [juSPH: A Julia-based open-source package of parallel Smoothed Particle Hydrodynamics (SPH) for dam break problems], which includes both multi-core parallel and serial versions. The code is written in Julia taking advantage of the powerful computing performance, fully open source, and highly readable code features of Julia. It can be integrated with Visual Studio Code to build the run-time environments, Particle data is output in the vtu format, compatible with modern visualization software Paraview.
DOI: 10.17632/b354vh7nw5
title: Data for: Multi-layer surface modification of islets for magnetic resonance imaging using directly-linked ferumoxytol

description: The 'raw data_pzf.zip' file contains the graphs of the submitted manuscript as a form of Graphpad PRISM files, which includes the raw values of each observation as embedded spreadsheets. Other images are uncropped copies of the images in the figures of the submitted manuscript.
DOI: 10.17632/bjsnjtjnzh
title: Exhibitors' value perceptions, exhibition attachment, and satisfaction

description: In 2019, we conducted two surveys on two landmark or famous exhibitions in Shenzhen - ICIF and Hi-tech fair. We used SPSS and Smart-pls to conduct the analysis, and the data results were in the folder.