cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2mg9v8
title: CCDC 2426830: Experimental Crystal Structure Determination

description: Related Article: Tongwei Zhang, Xiaofeng Yuan, Ze Xu, Yuangang Xu, Ming Lu|2025|Cryst.Growth Des.|||doi:10.1021/acs.cgd.5c01019
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mhw23
title: CCDC 2428325: Experimental Crystal Structure Determination

description: Related Article: Parisa Dehghan, Masoumeh Tabatabaee, Seyed Morteza Seifati, Michal Dušek, Monika Kučeráková|2026|J.Mol.Struct.|1351||doi:10.1016/j.molstruc.2025.144143
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6075/j0hq3z59
title: CIL:1309, Paramecium tetraurelia, cell by organism, eukaryotic cell, Eukaryotic Protist, Ciliated Protist. In Cell Image Library

description: Preparation: glutaraldehyde fixed tissue; tissue in vitreous ice embedment; microtome-sectioned tissue; monoclonal antibody
Relation to intact cell: microtome-sectioned tissue
Item type: transmission electron microscopy (TEM); illumination by electrons
Imaging mode: detection of electrons; film
Parameter imaged: electron density
Source of contrast: intrinsic mass distribution; stain with broad specificity
Visualization methods: stain with broad specificity; uranyl salt; gold
Processing history: recorded image; film; unprocessed raw data
Data qualification: Raw;spatialmeasurements
description: High resolution image of immunogold b-tubulin labeled ribbons that extend from the cytopharynx and have discoidal vesicles bound to their kinetic side, i.e., their anterior side relative to the cell's longitudinal axis (sidedness explained in Fok et al., J. Euk. Microbiol. 2008). TEM taken on 7/5/96 by R. Allen with Zeiss 10A operating at 80kV. Neg. 12,000X. Cells were lightly fixed with 0.25% glutaraldehyde and infiltrated with 2.3M sucrose before being frozen in liquid nitrogen and thin sectioned at a temperature of –100°C at approximately 75nm thickness. Frozen sections from these preparations were then thawed, washed, and exposed to a monoclonal primary antibody that was raised in mice or rabbit/goat and to colloidal gold-complexed goat-anti-mouse/rabbit secondary antibodies. Further details of preparation are detailed in Methods Cell Biol. 2010;96:143-73. The raw film was scanned with a Nikon Coolscan 9000ED. This image is best used for quantitative analysis. Additional information available at (http://www5.pbrc.hawaii.edu/allen/).
DOI: 10.5517/ccdc.csd.cc2mj309
title: CCDC 2428540: Experimental Crystal Structure Determination

description: Related Article: Fengting Tang, Namei Zheng, Yuhui Wang, Jinjun Li, Ronglan Tan, Zhiyun Du, Huarong Huang, Guangying Chen|2025|Nat.Prod.Res.||1|doi:10.1080/14786419.2025.2570894
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mjgpb
title: CCDC 2428902: Experimental Crystal Structure Determination

description: Related Article: Changjiang Wu, Hui Guo, Bingjian Feng, Songyi Li, Tianlin Zhou, Yingzhuang Xu, Jie Zhang, Peng Cui, Yinshan Meng, Huayi Fang, Chunhua Yan|2025|Angew.Chem.,Int.Ed.|64|e202511551|doi:10.1002/anie.202511551
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mmn97
title: CCDC 2431959: Experimental Crystal Structure Determination

description: Related Article: Takahiro Suto, Chris La, John F. Hartwig|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c05764
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6075/j03f4ndm
title: CIL:13089, Xenopus [NCBITaxon:262014]. In Cell Image Library

description: Dual-channel spinning-disk confocal time-lapse movie showing kinetochores (Alexa488 labeled CENP-A antibody) in metaphase (red) relative to poleward microtubule flux. Fluorescent speckle microscopy (FSM) of microtubules and kinetochore imaging during metaphase was performed as described in Maddox et al. (2002, 2003), and with a 100X/1.4 NA Plan Apochromat objective (Nikon) with 2X2 binning in the cooled CCD camera (model ER; Hamamatsu Corporation). MetaMorph® software (Universal Imaging Corp.) was used to control shutters, wavelength selection, image acquisition, and storage. Images were acquired at 5-s intervals. Sequential images of different fluorophores were acquired at 3-15s intervals, depending on the experiment. Paired images from different color channels were within 0.5 s of each other. Movie is video 2 from J Cell Biol 2003 162:377-382.
description: Preparation: unfixed tissue
Relation to intact cell: cell extract
Item type: recorded image
Imaging mode: spinning disk confocal microscopy; fluorescent speckle microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: X-Rhodamine; Alexa Fluor 488; labeled primary antibody
Processing history: color combine
Data qualification: Raw;intensitiesquantitation
DOI: 10.5517/ccdc.csd.cc2mmnb8
title: CCDC 2431960: Experimental Crystal Structure Determination

description: Related Article: Takahiro Suto, Chris La, John F. Hartwig|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c05764
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6075/j0028q6j
title: CIL:13088, Xenopus [NCBITaxon:262014]. In Cell Image Library

description: Preparation: unfixed tissue
Relation to intact cell: cell extract
Item type: recorded image
Imaging mode: spinning disk confocal microscopy; fluorescent speckle microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein; distribution of nucleic acid
Visualization methods: X-Rhodamine; probes for nucleic acid
Processing history: color combine
Data qualification: Raw;intensitiesquantitation
description: Dual-channel spinning-disk confocal time-lapse movie showing anaphase relative to poleward microtubule flux. Fluorescent speckle microscopy (FSM) of microtubules was performed as described in Maddox et al. (2002, 2003), and with a 100X/1.4 NA Plan Apochromat objective (Nikon) with 2X2 binning in the cooled CCD camera (model ER; Hamamatsu Corporation). MetaMorph® software (Universal Imaging Corp.) was used to control shutters, wavelength selection, image acquisition, and storage. DNA was visualized by adding Oli-green to the extract (final concentration of 1 µg/ml). Images were acquired at 10-s intervals. Sequential images of different fluorophores were acquired at 3-15s intervals, depending on the experiment. Paired images from different color channels were within 0.5 s of each other. Movie is video 1 from J Cell Biol 2003 162:377-382.
DOI: 10.5517/ccdc.csd.cc2mmyt1
title: CCDC 2432254: Experimental Crystal Structure Determination

description: Related Article: Javier Sánchez-Escalera, Alberto Cedillo-Cruz, Marco A. García-Eleno, Diego Martínez-Otero, Mario Valle-Sánchez, David Morales-Morales, Erick Cuevas-Yañez|2025|Polyhedron|282||doi:10.1016/j.poly.2025.117807
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mmyv2
title: CCDC 2432255: Experimental Crystal Structure Determination

description: Related Article: Javier Sánchez-Escalera, Alberto Cedillo-Cruz, Marco A. García-Eleno, Diego Martínez-Otero, Mario Valle-Sánchez, David Morales-Morales, Erick Cuevas-Yañez|2025|Polyhedron|282||doi:10.1016/j.poly.2025.117807
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6075/j0k35szq
title: CIL:1304, Caenorhabditis elegans, muscle cell. In Cell Image Library

description: C. elegans muscle age is a data set of fluorescence 20X microscopy images of C. elegans nematodes stained with phalloidin to visualize actin in muscles at different ages (1,2,4, and 8). Note that the data sets for each age can be found by searching for a featured image from each set: CIL 1005, 1057, 1105, and 1265, respectively.
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: fluorescence microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope
Visualization methods: phalloidin
Processing history: unprocessed raw data
description: The purpose of the dataset C. elegans muscle aging is to deduce the age of the nemathode based on images of muscles. Images of C. elegans were taken at different chronological ages. This image is part of the day 8 data set. Note that the morphological and chronological ages are not fully correlated due to the variability among individuals even though the individuals are genetically identical. The source for the dataset is Laboratory of Genetics/NIA/NIH.
DOI: 10.5517/ccdc.csd.cc2mnphh
title: CCDC 2432957: Experimental Crystal Structure Determination

description: Related Article: Xiang-Zeng Wang, Meng-Xin Xu, Li-Li Wen, Ying-Chen Duan, Jing-Xin Cui, Guo-Gang Shan, Hui-Ting Mao, Wen-Fa Xie, Zhong-Min Su|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c03387
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mpzv5
title: CCDC 2434208: Experimental Crystal Structure Determination

description: Related Article: Jingjing Bi, Wei Chen, Yuwei Hao|2025|Z.Kristallogr.-New Cryst.Struct.|240|721|doi:10.1515/ncrs-2025-0204
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mqq69
title: CCDC 2434901: Experimental Crystal Structure Determination

description: Related Article: Debashis Jana, Sampad Malik, Gopal Kanrar, Kausikisankar Pramanik|2025|J.Org.Chem.|||doi:10.1021/acs.joc.5c01531
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mqq7b
title: CCDC 2434902: Experimental Crystal Structure Determination

description: Related Article: Debashis Jana, Sampad Malik, Gopal Kanrar, Kausikisankar Pramanik|2025|J.Org.Chem.|||doi:10.1021/acs.joc.5c01531
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6075/j0z60n93
title: CIL:1303, Caenorhabditis elegans, muscle cell. In Cell Image Library

description: The purpose of the dataset C. elegans muscle aging is to deduce the age of the nemathode based on images of muscles. Images of C. elegans were taken at different chronological ages. This image is part of the day 8 data set. Note that the morphological and chronological ages are not fully correlated due to the variability among individuals even though the individuals are genetically identical. The source for the dataset is Laboratory of Genetics/NIA/NIH.
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: fluorescence microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope
Visualization methods: phalloidin
Processing history: unprocessed raw data
description: C. elegans muscle age is a data set of fluorescence 20X microscopy images of C. elegans nematodes stained with phalloidin to visualize actin in muscles at different ages (1,2,4, and 8). Note that the data sets for each age can be found by searching for a featured image from each set: CIL 1005, 1057, 1105, and 1265, respectively.
DOI: 10.5517/ccdc.csd.cc2mqq8c
title: CCDC 2434903: Experimental Crystal Structure Determination

description: Related Article: Debashis Jana, Sampad Malik, Gopal Kanrar, Kausikisankar Pramanik|2025|J.Org.Chem.|||doi:10.1021/acs.joc.5c01531
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6075/j0z60n8n
title: CIL:1301, Caenorhabditis elegans, muscle cell. In Cell Image Library

description: C. elegans muscle age is a data set of fluorescence 20X microscopy images of C. elegans nematodes stained with phalloidin to visualize actin in muscles at different ages (1,2,4, and 8). Note that the data sets for each age can be found by searching for a featured image from each set: CIL 1005, 1057, 1105, and 1265, respectively.
description: The purpose of the dataset C. elegans muscle aging is to deduce the age of the nemathode based on images of muscles. Images of C. elegans were taken at different chronological ages. This image is part of the day 8 data set. Note that the morphological and chronological ages are not fully correlated due to the variability among individuals even though the individuals are genetically identical. The source for the dataset is Laboratory of Genetics/NIA/NIH.
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: fluorescence microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope
Visualization methods: phalloidin
Processing history: unprocessed raw data
DOI: 10.5517/ccdc.csd.cc2l2n4h
title: CCDC 2385826: Experimental Crystal Structure Determination

description: Related Article: Mannar R. Maurya, Devesh Singh, Sonu Kumar, Puneet Gupta, Fernando Avecilla|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c03567
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6075/j0k64h9j
title: CIL:1300, Caenorhabditis elegans, muscle cell. In Cell Image Library

description: C. elegans muscle age is a data set of fluorescence 20X microscopy images of C. elegans nematodes stained with phalloidin to visualize actin in muscles at different ages (1,2,4, and 8). Note that the data sets for each age can be found by searching for a featured image from each set: CIL 1005, 1057, 1105, and 1265, respectively.
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: fluorescence microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope
Visualization methods: phalloidin
Processing history: unprocessed raw data
description: The purpose of the dataset C. elegans muscle aging is to deduce the age of the nemathode based on images of muscles. Images of C. elegans were taken at different chronological ages. This image is part of the day 8 data set. Note that the morphological and chronological ages are not fully correlated due to the variability among individuals even though the individuals are genetically identical. The source for the dataset is Laboratory of Genetics/NIA/NIH.
DOI: 10.6075/j0h13191
title: CIL:1310, Paramecium tetraurelia, cell by organism, eukaryotic cell, Eukaryotic Protist, Ciliated Protist. In Cell Image Library

description: High resolution image of the macronucleus which contains microtubules that lie inside a seemingly intact nuclear envelope. Microtubules orient along the axis of macronuclear elongation in the form of small bundles. The section is immunogold labeled with anti-b-tubulin. TEM taken on 7/5/96 by R. Allen with Zeiss 10A operating at 80kV. Neg. 12,000X. were lightly fixed with 0.25% glutaraldehyde and infiltrated with 2.3M sucrose before being frozen in liquid nitrogen and thin sectioned at a temperature of –100°C at approximately 75nm thickness. Frozen sections from these preparations were then thawed, washed, and exposed to a monoclonal primary antibody that was raised in mice or rabbit/goat and to colloidal gold-complexed goat-anti-mouse/rabbit secondary antibodies. Further details of preparation are detailed in Methods Cell Biol. 2010;96:143-73. The raw film was scanned with a Nikon Coolscan 9000ED. This image is best used for quantitative analysis. Additional information available at (http://www5.pbrc.hawaii.edu/allen/).
description: Preparation: glutaraldehyde fixed tissue; tissue in vitreous ice embedment; microtome-sectioned tissue; monoclonal antibody
Relation to intact cell: microtome-sectioned tissue
Item type: transmission electron microscopy (TEM); illumination by electrons
Imaging mode: detection of electrons; film
Parameter imaged: electron density
Source of contrast: intrinsic mass distribution; stain with broad specificity
Visualization methods: stain with broad specificity; uranyl salt; gold
Processing history: recorded image; film; unprocessed raw data
Data qualification: Raw;spatialmeasurements
DOI: 10.6075/j0qc02pj
title: CIL:13096, Paramecium multimicronucleatum, cell by organism, eukaryotic cell, Eukaryotic Protist, Ciliated Protist. In Cell Image Library

description: Preparation: glutaraldehyde fixed tissue; osmium tetroxide fixed tissue; tissue in epoxy resin embedment; microtome-sectioned tissue
Relation to intact cell: microtome-sectioned tissue
Item type: transmission electron microscopy (TEM); illumination by electrons
Imaging mode: detection of electrons; film
Parameter imaged: electron density
Source of contrast: stain with broad specificity
Visualization methods: stain with broad specificity; osmium tetroxide; uranyl salt; lead salt
Processing history: recorded image; film; unprocessed raw data
Data qualification: Raw;spatialmeasurements
description: High resolution image of the collecting canal of the contractile vacuole complex. Normally the collecting canal is expanded when the CV is in systole. In this micrograph the collecting canal is empty so that its two sides are flattened against each other. Presumably the CV is in diastole (filling phase). The ribbon of microtubules is split into 10 groups of two tubules each so the ribbon has 18 to 20 microtubules at this level. The smooth spongiome is connected to the collecting canal and bundles of decorated spongiome form the peripheral layer of the radial arm. The decorations consist of 2 closely set globular units forming a helix around the tubule. In this micrograph the globular units are outlined with more electron dense material so it appears there are 3 threads making up a helix. TEM taken on 12/9/70 by R. Allen with Hitachi HU11A operating at 75kV. Neg. 24,000X.The raw film was scanned with an Epson Perfection V750 Pro. This image is best used for quantitative analysis. Standard glutaraldehyde fixation followed by osmium tetroxide, dehydrated in alcohol and embedded in an epoxy resin. Microtome sections prepared at approximately 75nm thickness. Additional information available at (http://www5.pbrc.hawaii.edu/allen/).
DOI: 10.6075/j09c6w4v
title: CIL:131, mouse/rat NG108-15, glioma, neuroblastoma. In Cell Image Library

description: Preparation: formaldehyde fixed tissue; detergent permeabilized
Relation to intact cell: detergent permeabilized
Item type: recorded image
Imaging mode: single-spot confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: Alexa Fluor 488; Alexa Fluor 555; primary antibody plus labeled secondary antibody
Processing history: non-linear methods
description: Cultured growth cone (NG108) labeled for F-actin with phalloidin (red) and conformationally activated beta1 integrin adhesion receptors with 9EG7 antibody (green). The adhesion molecules at the tips of the growth cone filopodia are primed to bind the extracellular matrix. These "sticky fingers" appear to search for sites to form adhesions that can be used to move the rest of the cell forward. Collected on Zeiss LSM 510 with a 63X plan Apo 1.4 NA objective. Pinholes adjusted around 1 Airy Unit to yield match volume according to wavelength. 488 actin image BP: 505-530, 532 activated integrin image: LP:560.
 
 Image format: red/green maximum projection followed by actin z-series and activated beta1 integrin z series. Related to Figure 4B in Science. 2007, 315(5814):992-5.