cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.35080/data.d.2019.p21
title: Dataset of Resource and Environment Atlas for the Purpose of Supporting and Serving the Planning, Construction and Green Development of Guangzhou

description: The Dataset of the Resource and Environment Atlas for the Purpose of Supporting and Serving the Planning, Construction and Green Development of Guangzhou (also referred to as the Atlas), a professional integrated atlas in geology, was prepared based on a collation and summary of the latest materials and results obtained from hydrogeological, engineering geological and environmental geological surveys. It focuses on the development of Guangzhou, one of the three poles of the Guangdong – Hong Kong – Macao Greater Bay Area. In the Atlas, it collected and collated environmental geological surveys, monitoring data and research results carried out in Guangdong, Hong Kong, Macau and Bay Area since the Land and Resources Survey.. Moreover, they were expressed in a more popular and legible means such as figures or forms based on secondary study and development. In general, the Atlas consists of 53 maps and 6 categories, i.e., introductory maps, maps on the assessment of the geological suitability for the development and utilization of national land space, maps on the major geological safety problems that ought to be noted in urban planning and construction, maps on the advantageous geological resources that ought to be fully utilized for industrial development, maps on the state of the resources and environment that ought to be focused on for ecological environmental protection and maps on the basic geological conditions. Furthermore, the Atlas also contains the geological recommendations to support the development of green ecological agriculture, the development of a clean energy industry, safe use of water, the development of a tourism industry and the enhancement of the abilities to prevent and reduce natural disasters in the Guangdong – Hongkong – Macao Greater Bay Area, effectively serving the planning of national land space and the building of sponge cities in Guangzhou.
description: 在对最新的水工环地质调查资料和成果进行梳理和总结的基础上，以粤港澳大湾区三极之一的广州市为重点，编制了地学专业综合图集−《支撑服务广州市规划建设与绿色发展资源环境图集》。《图集》收集和整理了国土资源大调查以来粤港澳湾区开展的环境地质调查、监测数据资料和研究成果等，经二次开发研究，以通俗易读或图或表的形式表示出来。《图集》整体分为序图、国土空间开发利用的地质适宜性评价、城市规划建设应关注的重大地质安全问题、产业发展可以充分利用的优势地质资源、生态环境保护需要重视的资源环境状况和基础地质条件类图件6大类，共53张图，并提出了助力大湾区绿色生态农业发展、清洁能源产业发展、用水安全、旅游产业发展和提升防灾减灾能力等五方面的地质建议，有效服务了广州国土空间规划与海绵城市建设。
DOI: 10.15468/dl.nmucnc
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Micropus supinus L.",
 "Geometry POLYGON((-4.57907617500001 39.884719509, -4.57907617500001 41.165844755, -3.05298331400002 41.165844755, -3.05298331400002 39.884719509, -4.57907617500001 39.884719509))"
 ]
}

 The dataset includes 26 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006729-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n955d9
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Micropus supinus L.",
 "Geometry POLYGON((-4.57907617500001 39.884719509, -4.57907617500001 41.165844755, -3.05298331400002 41.165844755, -3.05298331400002 39.884719509, -4.57907617500001 39.884719509))"
 ]
}

 The dataset includes 26 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006728-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9jm6nz
title: Occurrence Download

description: A dataset containing 436 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saussurea medusa Maxim."
 ]
}

 The dataset includes 436 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006697-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14942583
title: Transcriptome analysis of high and low biofilm forming clinical strains of Pseudomonas aeruginosa
DOI: 10.5281/zenodo.14973301
title: Transcriptome analysis of high and low biofilm forming clinical strains of Pseudomonas aeruginosa
DOI: 10.5281/zenodo.14942582
title: Transcriptome analysis of high and low biofilm forming clinical strains of Pseudomonas aeruginosa
DOI: 10.5281/zenodo.14978410
title: Transcriptome analysis of high and low biofilm forming clinical strains of Pseudomonas aeruginosa
DOI: 10.5281/zenodo.14978419
title: [IO Islamic 110] زاد المسافرين

description: Zâd-almusâfirîn

This manuscript is now IO Islamic 1832 in the India Office collections.

[metadata: Hermann Ethé, Catalogue of Persian Manuscripts in the Library of the India Office, 2 vols. (Oxford: India Office, 1903): volume 1, number 110 here with notations and hyperlinks].


1832

Zâd-almusâfirîn (زاد المسافرين).

The provision for travellers (on the mystic road), another Ṣûfic mathnawî by Mîr Fakhr-alsâdât Ḥusainî, in imitation of Sanâ’î’s Ḥadîḳah (see Nos. 914-927 above), in eight maḳâlas, viz.:

1.در مجاهد طلب حق, on fol. 188a.

2.فى شرف البيان, on fol. 195a.

3.در ارشاد و معامله, on fol. 205b.

4.در صفت سالك طريقت, on fol. 208a.

5.در بيان عشق و مراتب او, on fol. 215a.

6.در معرفت نفس و الطاف او, on fol. 224a, first line.

7.در معرفت دين و در بيان تحقيق او, on fol. 231b.

8.در بيان حال پير و مريد, on fol. 242b.

Beginning:

اى برتر از آن همه كه گفتند – آنانكه پديد يا نهفتند

The date appears here on fol. 251a, in the last bait but one, in this form:

در هفصد و بيست در زهجرت

گشت آخر اين كتاب تمّت

=A.H. 720, see the remark in No. 1821 above. Other copies of this poem are noticed in Bodleian Cat., No. 1259; Rieu ii. p. 608; A. Sprenger, Catal., pp. 430 and 431; W. Pertsch, p. 10; Cat. Codd. Or. Lugd. Bat. ii. p. 116 ; Cat. des MSS. et Xylogr., pp. 356 and 438; see also Ḥ. Khalfa iii. p. 528, No. 6774.

No date.

No. 110, ff. 184-251, 2 coll., each ll. 11; Nasta’lîḳ; small illuminated heading on fol. 184b; size, 6½ in. by 3½ in.
DOI: 10.5281/zenodo.14978420
title: [IO Islamic 110] زاد المسافرين

description: Zâd-almusâfirîn

This manuscript is now IO Islamic 1832 in the India Office collections.

[metadata: Hermann Ethé, Catalogue of Persian Manuscripts in the Library of the India Office, 2 vols. (Oxford: India Office, 1903): volume 1, number 110 here with notations and hyperlinks].


1832

Zâd-almusâfirîn (زاد المسافرين).

The provision for travellers (on the mystic road), another Ṣûfic mathnawî by Mîr Fakhr-alsâdât Ḥusainî, in imitation of Sanâ’î’s Ḥadîḳah (see Nos. 914-927 above), in eight maḳâlas, viz.:

1.در مجاهد طلب حق, on fol. 188a.

2.فى شرف البيان, on fol. 195a.

3.در ارشاد و معامله, on fol. 205b.

4.در صفت سالك طريقت, on fol. 208a.

5.در بيان عشق و مراتب او, on fol. 215a.

6.در معرفت نفس و الطاف او, on fol. 224a, first line.

7.در معرفت دين و در بيان تحقيق او, on fol. 231b.

8.در بيان حال پير و مريد, on fol. 242b.

Beginning:

اى برتر از آن همه كه گفتند – آنانكه پديد يا نهفتند

The date appears here on fol. 251a, in the last bait but one, in this form:

در هفصد و بيست در زهجرت

گشت آخر اين كتاب تمّت

=A.H. 720, see the remark in No. 1821 above. Other copies of this poem are noticed in Bodleian Cat., No. 1259; Rieu ii. p. 608; A. Sprenger, Catal., pp. 430 and 431; W. Pertsch, p. 10; Cat. Codd. Or. Lugd. Bat. ii. p. 116 ; Cat. des MSS. et Xylogr., pp. 356 and 438; see also Ḥ. Khalfa iii. p. 528, No. 6774.

No date.

No. 110, ff. 184-251, 2 coll., each ll. 11; Nasta’lîḳ; small illuminated heading on fol. 184b; size, 6½ in. by 3½ in.
DOI: 10.15468/dl.9fusez
title: Occurrence Download

description: A dataset containing 789 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Amblychaeturichthys hexanema (Bleeker, 1853)"
 ]
}

 The dataset includes 789 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006696-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5dvgs7
title: Occurrence Download

description: A dataset containing 839382 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centropus sinensis (Stephens, 1815)"
 ]
}

 The dataset includes 839382 records from 114 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006692-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f2acg5
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Minuartia campestris L.",
 "Geometry POLYGON((-4.57907617500001 39.884719509, -4.57907617500001 41.165844755, -3.05298331400002 41.165844755, -3.05298331400002 39.884719509, -4.57907617500001 39.884719509))"
 ]
}

 The dataset includes 63 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006698-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14978445
title: [IO Islamic 650] زاد المسافرين

description: Zâd-almusâfirîn

This manuscript is now IO Islamic 1833 in the India Office collections.

[metadata: Hermann Ethé, Catalogue of Persian Manuscripts in the Library of the India Office, 2 vols. (Oxford: India Office, 1903): volume 1, number 650 here with notations and hyperlinks].


1833

Another copy of the same.

Beginning the same as in the preceding copy. The date appears here in this form: در هفصد و بيست بُد زهجرت again=A.H.720.

No date.

No. 650, ff. 56, 2 coll., each ll. 13; Nasta’lîḳ; size, 81/2 in. by 47/8 in.
DOI: 10.5281/zenodo.14978446
title: [IO Islamic 650] زاد المسافرين

description: Zâd-almusâfirîn

This manuscript is now IO Islamic 1833 in the India Office collections.

[metadata: Hermann Ethé, Catalogue of Persian Manuscripts in the Library of the India Office, 2 vols. (Oxford: India Office, 1903): volume 1, number 650 here with notations and hyperlinks].


1833

Another copy of the same.

Beginning the same as in the preceding copy. The date appears here in this form: در هفصد و بيست بُد زهجرت again=A.H.720.

No date.

No. 650, ff. 56, 2 coll., each ll. 13; Nasta’lîḳ; size, 81/2 in. by 47/8 in.
DOI: 10.15468/dl.sdk47f
title: Occurrence Download

description: A dataset containing 27850 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Calystegia silvatica (Kit.) Griseb.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 27850 records from 264 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006699-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3prj6b
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Minuartia campestris L.",
 "Geometry POLYGON((-4.57907617500001 39.884719509, -4.57907617500001 41.165844755, -3.05298331400002 41.165844755, -3.05298331400002 39.884719509, -4.57907617500001 39.884719509))"
 ]
}

 The dataset includes 63 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006700-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.trkkgu
title: Occurrence Download

description: A dataset containing 290 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Odontotermes formosanus (Shiraki, 1909)"
 ]
}

 The dataset includes 290 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006730-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14978058
title: Investigating the Implications of ALE Mutations on the E. coli Metalloproteome with GPS-2M: A Structural and Evolutionary Perspective

description: Data-centric approaches that describe the functional and three-dimensional characteristics of prokaryotic metalloproteomes are limited, as are analytical approaches that explore the relationships between metalloproteins and adaptive mutations. Analyzing the reconstructed E. coli Gene-Protein Structure-Metal/Mutations (GPS-2M) dataset addresses these gaps by scrutinizing the spatial relationships between adaptive mutations on metalloproteins and their potential physiological impacts. GPS-2M integrates protein structures from protein crystallography data of known metal-binding positions and a meta-analysis of both adaptive laboratory evolution (ALE) and long-term evolutionary experiments (LTEE). This combinatory analysis reveals trends in close-range ALE-induced amino acid property changes related to metal binding sites, thus informing potential targets for metalloprotein design. Associating ALE mutants and experiments with metalloproteins has identified specific functional pathways, post-translational modifications, and downstream mutation targets for follow-up microbial strain design optimization. Specifically, we identified a range of close ALE mutations (0-5 Å) in relation to metal-binding sites on proteins, suggesting mutation targets of ALE experiments that can influence the coordination between metal ions and their residues. Mutations clustered around Zn-binding proteins PyrC, the Hg-binding uvrD, and Mo-binding narG, among numerous others, are pinpointed as optimal target sites for enhancing strain design efficacy. The proximity of ALE mutations to metal-binding sites underscores their potential significance in maintaining and improving physiological homeostasis. Our data-driven approach provides supplemental knowledge to the structural and adaptive dynamics of the E. coli metalloproteome, with implications for future studies to design ALE experiments to optimize metal-binding sites to develop evolutionary-inspired biotechnology.
DOI: 10.5281/zenodo.14978059
title: Investigating the Implications of ALE Mutations on the E. coli Metalloproteome with GPS-2M: A Structural and Evolutionary Perspective

description: Data-centric approaches that describe the functional and three-dimensional characteristics of prokaryotic metalloproteomes are limited, as are analytical approaches that explore the relationships between metalloproteins and adaptive mutations. Analyzing the reconstructed E. coli Gene-Protein Structure-Metal/Mutations (GPS-2M) dataset addresses these gaps by scrutinizing the spatial relationships between adaptive mutations on metalloproteins and their potential physiological impacts. GPS-2M integrates protein structures from protein crystallography data of known metal-binding positions and a meta-analysis of both adaptive laboratory evolution (ALE) and long-term evolutionary experiments (LTEE). This combinatory analysis reveals trends in close-range ALE-induced amino acid property changes related to metal binding sites, thus informing potential targets for metalloprotein design. Associating ALE mutants and experiments with metalloproteins has identified specific functional pathways, post-translational modifications, and downstream mutation targets for follow-up microbial strain design optimization. Specifically, we identified a range of close ALE mutations (0-5 Å) in relation to metal-binding sites on proteins, suggesting mutation targets of ALE experiments that can influence the coordination between metal ions and their residues. Mutations clustered around Zn-binding proteins PyrC, the Hg-binding uvrD, and Mo-binding narG, among numerous others, are pinpointed as optimal target sites for enhancing strain design efficacy. The proximity of ALE mutations to metal-binding sites underscores their potential significance in maintaining and improving physiological homeostasis. Our data-driven approach provides supplemental knowledge to the structural and adaptive dynamics of the E. coli metalloproteome, with implications for future studies to design ALE experiments to optimize metal-binding sites to develop evolutionary-inspired biotechnology.
DOI: 10.5281/zenodo.13846613
title: Dataset from Gut Microbial Community Structure, Metabolic Signature, and Resistome in Dyslipidemia: Insights from Metagenomic Sequencing

description: Dyslipidemia, characterized by abnormal blood lipid levels, is a significant risk factor for cardiovascular disease. Emerging evidence suggests that the gut microbiota plays a role in lipid metabolism, although findings across studies have varied. In this study, we analyzed the gut microbiota, metabolic pathways, predicted gut metabolites, and resistome in 1384 participants (895 with dyslipidemia cases and 489 controls) using shotgun metagenomic sequencing. Our results revealed that Bacteroides caccae was enriched in dyslipidemia cases, potentially contributing to inflammation and altered lipid metabolism, while Coprococcus eutactus and Coprococcus catus, known producers of short-chain fatty acids (SCFAs) in lipid regulation, and Blautia obeum, known to be positively impacted by SCFAs, were more abundant in controls. We also identified an enrichment of the dTDP-beta-D-fucofuranose biosynthesis pathway gene family, which is linked to bacterial pathogenicity, in dyslipidemia cases, with Bacteroides stercoris contributing strongly. Dyslipidemia cases exhibited depleted glycogen and peptidoglycan biosynthesis pathways, potentially impairing energy storage and immune function, alongside distinct metabolic profiles, including decreased pseudouridine involved with RNA metabolism. Furthermore, we observed a higher abundance of antibiotic-resistance genes, particularly tetQ, in dyslipidemia cases, suggesting a link between gut resistome and metabolic disorders. These findings provide new insights into how dysbiosis of the gut microbiota may contribute to the pathophysiology of dyslipidemia, offering potential avenues for microbiome-based interventions in personalized medicine.
DOI: 10.15468/dl.889jzj
title: Occurrence Download

description: A dataset containing 436 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saussurea medusa Maxim."
 ]
}

 The dataset includes 436 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006731-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14978467
title: [IO Islamic 1090] زاد المسافرين

description: Zâd-almusâfirîn

This manuscript is now IO Islamic 1834 in the India Office collections.

[metadata: Hermann Ethé, Catalogue of Persian Manuscripts in the Library of the India Office, 2 vols. (Oxford: India Office, 1903): volume 1, number 1090 here with notations and hyperlinks].


1834

The same.

Here the date of composition is distinctly as in the copy of Sprenger׳s Oudh Catal., viz.:در هفصد و بيست و نه زهجرت = A.H. 729.

No date.

Other works of the same Fakhr-alsâdât Ḥusainî are: سى نامه ; روح الارواح ; صراط مستقيم (all three mentioned in the Haft Iḳlim, No. 609); and قلندر نامه (Rieu ii. p. 774b).

No. 1090, ff. 1-49, 2 coll., each ll. 15; large and distinct Nasta’lîḳ; illuminated frontispiece, the first two pages richly adorned; size, 6¾ in. by 3¾ in.
DOI: 10.5281/zenodo.14978468
title: [IO Islamic 1090] زاد المسافرين

description: Zâd-almusâfirîn

This manuscript is now IO Islamic 1834 in the India Office collections.

[metadata: Hermann Ethé, Catalogue of Persian Manuscripts in the Library of the India Office, 2 vols. (Oxford: India Office, 1903): volume 1, number 1090 here with notations and hyperlinks].


1834

The same.

Here the date of composition is distinctly as in the copy of Sprenger׳s Oudh Catal., viz.:در هفصد و بيست و نه زهجرت = A.H. 729.

No date.

Other works of the same Fakhr-alsâdât Ḥusainî are: سى نامه ; روح الارواح ; صراط مستقيم (all three mentioned in the Haft Iḳlim, No. 609); and قلندر نامه (Rieu ii. p. 774b).

No. 1090, ff. 1-49, 2 coll., each ll. 15; large and distinct Nasta’lîḳ; illuminated frontispiece, the first two pages richly adorned; size, 6¾ in. by 3¾ in.
DOI: 10.35080/data.d.2019.p12
title: Comprehensive Dataset of the Geological Environment in China’s Coastal Zone
title: 全国海岸带地质环境综合数据集

description: The comprehensive dataset of the geological environment in the coastal zone of China obtained as a result of geological survey, is designed according to the overall concept of land-sea coordination to achieve full coverage of relevant disciplines, techniques and methods. The data fall into four categories, namely, comprehensive field surveys, comprehensive field construction, field dynamic monitoring and sample testing. There are total 130 data tables and 177 592 pieces of data, including 9 types of data table and 9 006 pieces of data in the comprehensive field survey category, 68 types of data table and 89 551 pieces of data in the comprehensive field construction category, 28 data table types and 12 305 pieces of data in the field dynamic monitoring category, and 25 data table types and 66 730 pieces of data in the sample testing category. This dataset provides efficient and accurate data services for the unified management of coastal natural resources, spatial planning of territory, use control, ecological protection and restoration.
description: 全国海岸带地质环境综合数据集为海岸带综合地质调查工程的数据成果，按照陆海统筹的总体思路设计，重点实现海陆调查专业学科全覆盖，技术方法手段全覆盖。数据内容主要包括野外综合调查、野外综合施工、野外动态监测、样品测试4大类，共计数据表130个，数据177 592条。其中野外综合调查类包含9个数据表，9 006条数据；野外综合施工类包含68个数据表，89 551条数据；野外动态监测类包含28个数据表，12 305条数据；样品测试类包含25个数据表，66 730条数据。本数据集为海岸带自然资源统一管理、国土空间规划和用途管制以及生态保护修复等提供高效精准的数据服务。
DOI: 10.5281/zenodo.14978096
title: Global sensitivity analysis for investigation of bacterial physiology in complex media with FBA-PRCC

description: This dataset was created by the use of FBA-PRCC approach, which is based on sampling flux space and global sensitivity analysis (GSA), for analysis of the GEM FBA solution space in the nutrient-rich environment. We identify two new modes of interaction between species and metabolites: attraction and avoidance, and propose the way of their use. We have shown that sensitivity coefficients provide additional information about the behavior of the bacteria in the nutrient-rich environment in comparison to standard knockouts, FVA and CoPE-FBA analysis.
DOI: 10.5281/zenodo.14978097
title: Global sensitivity analysis for investigation of bacterial physiology in complex media with FBA-PRCC

description: This dataset was created by the use of FBA-PRCC approach, which is based on sampling flux space and global sensitivity analysis (GSA), for analysis of the GEM FBA solution space in the nutrient-rich environment. We identify two new modes of interaction between species and metabolites: attraction and avoidance, and propose the way of their use. We have shown that sensitivity coefficients provide additional information about the behavior of the bacteria in the nutrient-rich environment in comparison to standard knockouts, FVA and CoPE-FBA analysis.