cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7488/ds/1980
title: General calibration of microbial growth in microplate readers: Data supporting Figures 1-3

description: Data supporting figures 1-3 of the paper (Stevenson et al, https://doi.org/10.1101/061861). Optical density (OD) measurements of microbial growth are one of the most common techniques used in microbiology, with applications ranging from antibiotic efficacy studies, studies of growth under different nutritional or stress environments, to studies of different mutant strains, including those harbouring synthetic circuits. OD measurements are performed under the assumption that the OD value obtained is proportional to the cell number, i.e. the concentration of the sample. However, the assumption holds true in a limited range of conditions and calibration techniques that determine that range are currently missing. Here we present a set of calibration procedures and considerations that are necessary to successfully estimate the cell concentration from OD measurements.
description: Data for the other figures are available in the same DataShare Collection - see http://datashare.is.ed.ac.uk/handle/10283/2058. N.B. the file "OD Paper data-Fig1-3.zip" is identical to the file of the same name in the earlier version of this data deposit at https://doi.org/10.7488/ds/1446.
DOI: 10.7488/ds/1690
title: GitHub Java Corpus

description: The GitHub Java Corpus is a snapshot of all open-source Java code on GitHub in October 2012 that is contained in open-source projects that at the time had at least one fork. It contains code from 14,785 projects amounting to about 352 million lines of code. The dataset has been used to study coding practice in Java at a large scale.
DOI: 10.7488/ds/1762
title: Unique Code-Point Open locations polygons

description: 1,572,685 polygon records with EASTING,NORTHING and PAREA (postcode area) fields. Individual polygons could be aggregated using PAREA field and entire coverage clipped to a coastline dataset to give a GB Postcode Area dataset. Dataset created by reducing all records in Code-Point Open to a unique point set based on Easting & Northing, allocating the most frequently occurring postcode area at each unique location by sub-stringing unit postcode labels and then creating a thiessen polygon coverage from the pointset in arcinfo workstation. GIS vector data. This dataset was first accessioned in the EDINA ShareGeo Open repository on 2010-09-13 and migrated to Edinburgh DataShare on 2017-02-21.
description: ESRI Shapefile
DOI: 10.7488/ds/1955
title: Data Download Exercise

description: Zip file with exercises in PDF and PPTX formats, plus trainer guide and Quick Guides for all download services. GIS vector data. This dataset was first accessioned in the EDINA ShareGeo Open repository on 2014-04-10 and migrated to Edinburgh DataShare on 2017-02-22.
description: ESRI Shapefile
DOI: 10.7488/ds/220
title: IgM antibodies exhibit preferential binding to apoptotic and non-apoptotic nucleated cells
title: PLOS ONE Raw Data (PONE-D-14-47717)

description: Data set characterising IgM antibody binding to non-apoptotic, apoptotic and permeable murine/human thymocytes and murine erythrocytes. Methodology used consisted of flow cytometry, confocal and electron microscopy. With the exception of the 'Images.zip' file, the other zip files contain FCS files which are the standard file type used in flow cytometry. Software used in flow cytometry such as FlowJo can be used to open these files (or FCStrans for conversion).
DOI: 10.7488/ds/1807
title: CORONA Satellite Image of Area Extending from Hadj Yelane to Western Edge of Ayn al Arab (Jazira), Syria

description: This CORONA panchromatic satellite image covers an area extending from Hadj Yelane to western edge of Ayn al Arab (Jazira), Syria. Carablus is also in this image. A segment of the River Euphrates is also in the image, and with this image predating the construction of the Euphrates Dam at Tabqa, Syria and the Ataturk Dam to the north in Turkey, this makes the image especially important for identifying archaeological sites situated along the River Euphrates which would have become inundated with the formation of Lake Assad. The ground resolution is approximately 2 metres. This zipped image dataset also includes a screenshot showing a section of the image's footprint, which corresponds to the full extent of the captured images. There are four image segments associated with the full USGS provided footprint (DS1107-2138DA066_66_a.tif, DS1107-2138DA066_66_b.tif, DS1107-2138DA066_66_c.tif and DS1107-2138DA066_66_d.tif). This image corresponds to DS1107-2138DA066_66_a.tif There is no cloud cover associated with these images. Please note that the spatial accuracy is not reliable and may need to be geo-referenced again, though this was done to situate the image over the corresponding ground area. The RMS for this 0.01241. Users of this image will be able to identify areas using built environments and features of the physical landscape. This image was cropped to remove scanned negative border, and then geo-referenced in ArcGIS 9.3 using GoogleEarth to find physical features such as river conjunctions and road junctions. This CORONA satellite image was made available from the U.S. Geological Survey. Aerial or Satellite Imagery. This dataset was first accessioned in the EDINA ShareGeo Open repository on 2011-02-04 and migrated to Edinburgh DataShare on 2017-02-21.
description: GeoTIFF
DOI: 10.7488/ds/2439
title: Frustration wave order in iron(II) oxide spinels

description: Files are: Powder neutron and X-ray data files for Fe2GeO4 and Fe2SiO4 with different temperatures and take off angles as indicated in the file titles. Files are standard types generated by FullProf software. Data for all figures as shown in the indicated paper.
DOI: 10.7488/ds/1447
title: General calibration of microbial growth in microplate readers: Data supporting Figure 4

description: Data supporting figure 4 of the paper (Stevenson et al, https://doi.org/10.1101/061861). Optical density (OD) measurements of microbial growth are one of the most common techniques used in microbiology, with applications ranging from antibiotic efficacy studies, studies of growth under different nutritional or stress environments, to studies of different mutant strains, including those harbouring synthetic circuits. OD measurements are performed under the assumption that the OD value obtained is proportional to the cell number, i.e. the concentration of the sample. However, the assumption holds true in a limited range of conditions and calibration techniques that determine that range are currently missing. Here we present a set of calibration procedures and considerations that are necessary to successfully estimate the cell concentration from OD measurements.
description: Data for the other figures are available in the same DataShare Collection.
DOI: 10.7488/ds/1364
title: Negotiating Sonic Space for Group Electronics
title: Music and Sonic Art

description: Audio, video, image and PDF files relating to practice-led research supporting an article entitled "Negotiating Sonic Space for Group Electronics" Music and Sonic Art. (ed. Mine Dogantan Dack) Cambridge Scholars Press, Cambridge (Scheduled for publication in 2016). This includes supporting data including audio, video and still images for three case studies: 1. a performance of Morton Subotnick's "Sidewinder" by the Monosynth Orchestra: Sean Williams, Owen Green, Jules Rawlinson, Lauren Hayes, Dave Meckin, Lin Zhang, Henrik Ekeus, and Rachel Kellett 2. two performances of Sean Williams' "Electronic Skank", performed by Sean Williams, Owen Green, Jules Rawlinson, and Lauren Hayes, one at City University London, and one at the University of Edinburgh 3. four recordings from rehearsals of Christian Wolff's "For 1, 2, or 3 People", performed by Owen Green, Dave Murray-Rust, and Sean Williams.
DOI: 10.7488/ds/1399
title: I-Walk

description: The video, stills and audio materials of this data item are associated with the video walk "I-Walk" - produced by Jungenfeld at the I-Park Foundation Inc., Connecticut (USA). All the data were collected and the video walk produced in December 2012 during an artist residency at I-Park. The video walk and installation were presented at I-Park during the December Open Studios event. The visual content was produced in I-Park premises. The sound recording for the audiovisual installation was recorded in the Piano Field Trail, while playing an old-rusty piano frame outdoors. The research outcomes were presented at a PhD Student Symposium as part of the Andrew Carnegie Lecture Series (ECA, University of Edinburgh, 2014) and at the 5th International & Interdisciplinary Conference on Emotional Geographies, University of Edinburgh (2015). The video content was later re-used in 2013 (Jan-Feb) to test how participants engaged with projections during a series of projection tests in Edinburgh.
description: This data item contains the following files: 1_I-walk_video-walk_lowRes.mp4 (video file for portable projector), 2_I-Walk_video-walk.mov (video file for portable projector - highRes), 3_I-Walk_video-documentation.mov (documentation of video walk project - 2012), 4_I-Walk_video-installation.mov (video file for audiovisual installation - highRes), 5_I-Walk_stills.zip (still images from video walk), 6_I-Walk_audio.wav (audio file - mono), and 7_I-Walk_maps.zip (map outlining video walk).
DOI: 10.7488/ds/1710
title: SILAR BiOI sensitized TiO2 films for visible light photocatalytic degradation of rhodamine B and 4-chlorophenol

description: BiOI nanoplates were deposited upon a film of TiO2 nanoparticles derived from a commercial source using a simple room temperature SILAR method. X-ray diffraction, X-ray photoelectron spectroscopy and electron microscopies have been used to confirm the crystal phase, chemical states of key elements and morphology of the BiOI nanoplate-TiO2 composites. Using both valence band x-ray photoelectron spectroscopy and UV-vis diffuse reflectance measurements the band structure of the composites is determined to be that of a type II heterojunction. Through initial screening of the photocatalytic activity of the SILAR-modified films it was determined that 5 SILAR cycles was optimal in the photocatalytic degradation of Rhodamine B. The visible light sensitisation effect of BiOI was then proven by examination of the photocatalytic degradation of the colourless organic pollutant 4-chlorophenol showing a large enhancement over an equivalent TiO2 film.
DOI: 10.7488/ds/1559
title: Process integration of a Calcium-looping process with a natural gas combined cycle power plant for CO2 capture and its improvement by exhaust gas recirculation

description: In this study, it was sought to find an efficient way to integrate a Ca-looping process with a Natural Gas Combined Cycle (NGCC) power plant for its post-combustion CO2 capture. Compared to its application to coal combustion flue gas, Ca-looping would incur augmented energy penalty when integrated with a NGCC of which the flue gas contains only 4.0 mol% CO2. The reduced CO2 concentration in the feed requires the carbonator to operate at a lower temperature and more solids to circulate between carbonator and calciner for keeping up the carbon capture efficiency at 90%. However, this study demonstrated that such negative effects could be alleviated greatly by implementing 40% exhaust gas recirculation to the NGCC with the CO2 concentration in the flue gas increasing up to 6.8 %. Accordingly, the resulting net power efficiency increased notably 1.6% points in comparison to its equivalent non-EGR NGCC case and it was only 0.9% points less than amine capture case. This study exhibited that exhaust gas recirculation would be crucial in decarbonising a NGCC power plant by Ca-looping.
DOI: 10.3886/e187281
title: Data and Code for: Quantifying the Inflationary Impact of Fiscal Stimulus under Supply Constraints

description: Code and data for: Quantifying the Inflationary Impact of Fiscal Stimulus under Supply Constraints by di Giovanni, Kalemli-Ozcan, Silva, and Yildirim
DOI: 10.7488/ds/1731
title: VMap0 (1:1,000,000) topographic data for Northern Europe (incl. UK)

description: The Vector Map (VMap) Level 0 database represents the fifth edition of the Digital Chart of the World. The third/fourth edition was published in 199701. The product is dual named to show its lineage to the original DCW, published in 1992, while positioning the revised product within a broader family of VMap products. VMap Level 0 (VMap0) is a comprehensive 1:1,000,000 scale vector basemap of the world. It consists of cartographic, attribute, and textual data stored on compact disc read only memory (CDROM). The primary source for the database is the National Imagery and Mapping Agency's (NIMA) Operational Navigation Chart (ONC) series. This is the largest scale unclassified map series in existence that provides consistent, continuous global coverage of essential basemap features. The database contains more than 1,900 megabytes of vector data and is organized into 10 thematic layers. The data include major road and rail networks, major hydrologic drainage systems, major utility networks (cross-country pipelines and communication lines), all major airports, elevation contours (metric equivalent of 1000 foot (ft), with 500ft and 250ft supplemental contours), coastlines, international and first order boundaries and populated places. This dataset contains data from the eurasia CD and covers north/western Europe incl. UK. Purpose: The VMap0 is a general purpose global database designed to support Geographic Information Systems applications. This dataset was downloaded as VMap Level 0 data from the NGA 'geoengine' website using the NGA Raster Roam tool (http://geoengine.nga.mil/geospatial/SW_TOOLS/NIMAMUSE/webinter/rast_roam.html). The VMap data was loaded into CadCorp MapModeller and exported as Shapefiles using CadCorp. The field names were edited in ArcMap to remove spaces. The specification of the data and other metadata are included in the Zip file in the Metadata folder. The data is in the WGS 84 coordinate system. GIS vector data. This dataset was first accessioned in the EDINA ShareGeo Open repository on 2010-06-30 and migrated to Edinburgh DataShare on 2017-02-21.
description: ESRI Shapefile
DOI: 10.7488/ds/1936
title: 2011 Output Areas Entropy Index

description: Ethnic segregation as measured by the Entropy Index provides a measure of how homogeneous or diversified an area is in respect to others. Where the Index is computed as 0 this implies a fully homogeneous ethic composition. This dataset provides all 2011 Output Areas with a computed Entropy Index of 0. The dataset is based on univariate statistics on ethnicity at Output Area level as derived by Geolytix [geolytix.co.uk] and provided via the UK Data Service Census Support (UKBORDERS). The Entropy Index was derived using Apparicio, Philippe, Éric Fournier and Denis Apparicio (2012). Geo-Segregation Analyzer: a multi-platform application (version 1.0). Montreal, Spatial Analysis and Regional Economics Laboratory (SAREL), INRS Urbanisation Culture Société. GIS vector data. This dataset was first accessioned in the EDINA ShareGeo Open repository on 2013-04-15 and migrated to Edinburgh DataShare on 2017-02-22.
description: ESRI Shapefile
DOI: 10.7488/ds/1972
title: FOSS4G UK Training Data

description: Several datasets and workbook for use in the Visualising Arts and Humanities Data Workshop at the FOSS4G UK 2016 conference in Southampton. Tiff data generated from OpenStreetMap in QGIS as a screen Grab. (CC BY_SA). London Local Authorities derived from Open Government Data (OGL). Geoparsed text data derived from a book using the Edinburgh Geoparser, this data has been randomised and annonymised so is open data(ODbl). Hexagons created in QGIS using the MMQGIS plugin and is open data (ODbl). Other. This dataset was first accessioned in the EDINA ShareGeo Open repository on 2016-06-10 and migrated to Edinburgh DataShare on 2017-02-22.
description: ESRI Shapefile
DOI: 10.3886/e187281v1
title: Data and Code for: Quantifying the Inflationary Impact of Fiscal Stimulus under Supply Constraints

description: Code and data for: Quantifying the Inflationary Impact of Fiscal Stimulus under Supply Constraints by di Giovanni, Kalemli-Ozcan, Silva, and Yildirim
DOI: 10.7488/ds/1732
title: VMap0 (1:1,000,000) topographic data for Southern Europe and North Africa

description: The Vector Map (VMap) Level 0 database represents the fifth edition of the Digital Chart of the World. The third/fourth edition was published in 199701. The product is dual named to show its lineage to the original DCW, published in 1992, while positioning the revised product within a broader family of VMap products. VMap Level 0 (VMap0) is a comprehensive 1:1,000,000 scale vector basemap of the world. It consists of cartographic, attribute, and textual data stored on compact disc read only memory (CDROM). The primary source for the database is the National Imagery and Mapping Agency's (NIMA) Operational Navigation Chart (ONC) series. This is the largest scale unclassified map series in existence that provides consistent, continuous global coverage of essential basemap features. The database contains more than 1,900 megabytes of vector data and is organized into 10 thematic layers. The data include major road and rail networks, major hydrologic drainage systems, major utility networks (cross-country pipelines and communication lines), all major airports, elevation contours (metric equivalent of 1000 foot (ft), with 500ft and 250ft supplemental contours), coastlines, international and first order boundaries and populated places. This dataset contains data from the eurasia CD and covers south/western Europe and North Africa. Purpose: The VMap0 is a general purpose global database designed to support Geographic Information Systems applications. This dataset was downloaded as VMap Level 0 data from the NGA 'geoengine' website using the NGA Raster Roam tool (http://geoengine.nga.mil/geospatial/SW_TOOLS/NIMAMUSE/webinter/rast_roam.html). The VMap data was loaded into CadCorp MapModeller and exported as Shapefiles using CadCorp. The field names were edited in ArcMap to remove spaces. The specification of the data and other metadata are included in the Zip file in the Metadata folder. The data is in the WGS 84 coordinate system. GIS vector data. This dataset was first accessioned in the EDINA ShareGeo Open repository on 2010-06-30 and migrated to Edinburgh DataShare on 2017-02-21.
description: ESRI Shapefile
DOI: 10.7488/ds/1815
title: Office for National Statistics Postcode Directory (ONSPD) Open February 2011 edition

description: Open version of Office for National Statistics Postcode Directory (ONSPD) for February 2011. The ONSPD links all current and terminated UK postcodes to a range of geographies in which the postcodes fall. CSV dataset was downloaded from mySociety OS OpenData cache in CSV format. To this a header row giving column names was added. In addtion a version of the dataset in Access database MDB format has been created. The following attribution statement applies to this licence which must be acknowledged when the Data are used: 'Contains National Statistics data ©Crown Copyright and database right 2011'. Tabular data. This dataset was first accessioned in the EDINA ShareGeo Open repository on 2011-05-10 and migrated to Edinburgh DataShare on 2017-02-21.
description: Microsoft Access Database
DOI: 10.7488/ds/1858
title: 2011 Earthquakes

description: Earthquakes around the world in 2011. This data was collected from the USGS monitoring service. Earthquake magnitudes are shown along with the best estimates on the location of the epicentre. Derived from data from the USGS http://earthquake.usgs.gov/. GIS vector data. This dataset was first accessioned in the EDINA ShareGeo Open repository on 2011-09-26 and migrated to Edinburgh DataShare on 2017-02-21.
description: ESRI Shapefile
DOI: 10.7488/ds/1937
title: GB Station Use

description: Guardian Data Blog released passenger traffic info by Great Britain stations. These are posted by Royal Mail postcode centroids, on backdrop of Ordnance Survey county polygons, and NOAA GSSHG coastline for GB. contains data © Crown copyright and database rights 2013 Ordnance Survey. GIS vector data. This dataset was first accessioned in the EDINA ShareGeo Open repository on 2013-11-19 and migrated to Edinburgh DataShare on 2017-02-22.
description: ESRI Shapefile
DOI: 10.7488/ds/1688
title: Data from: The roles of plasticity and adaptive evolution in tracking temperature-mediated phenological optima in plants

description: This file contains phenological, geographical, and the best cues of each model type for 22 plant species. Two files are included: 1. A data file 2. A README file
DOI: 10.7488/ds/1816
title: Data for Paper: Using Sound to Represent Spatial Data in ArcGIS

description: Data for 'Using Sound to Represent Spatial Data in ArcGIS'. See paper for more information, available at http://www.nickbearman.me.uk/go/bearman_fisher_2011. Other. This dataset was first accessioned in the EDINA ShareGeo Open repository on 2011-05-27 and migrated to Edinburgh DataShare on 2017-02-21.
description: ESRI Shapefile
DOI: 10.7488/ds/1984
title: Assigned formula of complex mixture FT-ICR MS datasets
title: ESI, LDI and MALDI assigned formula of FT-ICR MS data for SRFA and SRNOM

description: The dataset included is of formula assigned from FT-ICR MS data for samples of Suwannee River fulvic acid (SRFA) and Suwannee River natural organic matter (SRNOM) (both are standards from the International Humic Substances Society) using a variety of ionisation sources. This includes electrospray ionisation (ESI), matrix assisted laser desorption/ionisation (MALDI) and matrix free laser desorption/ionisation (LDI).
description: All files are in .csv format for easy readability and manipulation. SRFA_ESI.csv, SRFA_LDI.csv, SRFA_MALDI.csv all represent data collected on a SRFA sample, ionised by ESI, LDI and MALDI repectively. SRNOM_ESI.csv and SRNOM_LDI.csv display ESI and LDI data for the SRNOM sample.
DOI: 10.7488/ds/1703
title: The role of correlations in the collective behaviour of microswimmer suspensions

description: In this work, we study the collective behaviour of a large number of self-propelled microswimmers immersed in a fluid. Using unprecedently large-scale lattice Boltzmann simulations, we reproduce the transition to bacterial turbulence. We show that, even well below the transition, swimmers move in a correlated fashion that cannot be described by a mean-field approach. We develop a novel kinetic theory that captures these correlations and is non-perturbative in the swimmer density. To provide an experimentally accessible measure of correlations, we calculate the diffusivity of passive tracers and reveal its non-trivial density dependence. The theory is in quantitative agreement with the lattice Boltzmann simulations and captures the asymmetry between pusher and puller swimmers below the transition to turbulence.