cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6566665
title: Superordinate Categorization Based on the Perceptual Organization of Parts - Dataset

description: This is the dataset for:<br> Tiedemann, H.; Schmidt, F.; Fleming, R.W. Superordinate Categorization Based on the Perceptual Organization of Parts. Brain Sci. 2022, 12, 667. https://doi.org/10.3390/brainsci1205066 Available at:<br> https://www.mdpi.com/2076-3425/12/5/667
description: Research funded by Deutsche Forschungsgemeinschaft (DFG, German Research Foun- dation) (project No. 222641018-SFB/TRR 135 TP C1), by the European Research Council (ERC) Consolidator Award "SHAPE" (project No. ERC-2015-CoG-682859), and by the Research Cluster "The Adaptive Mind" funded by the Excellence Program of the Hessian Ministry of Higher Education, Science, Research, and Art.
DOI: 10.5281/zenodo.6566664
title: Superordinate Categorization Based on the Perceptual Organization of Parts - Dataset

description: This is the dataset for:<br> Tiedemann, H.; Schmidt, F.; Fleming, R.W. Superordinate Categorization Based on the Perceptual Organization of Parts. Brain Sci. 2022, 12, 667. https://doi.org/10.3390/brainsci1205066 Available at:<br> https://www.mdpi.com/2076-3425/12/5/667
description: Research funded by Deutsche Forschungsgemeinschaft (DFG, German Research Foun- dation) (project No. 222641018-SFB/TRR 135 TP C1), by the European Research Council (ERC) Consolidator Award "SHAPE" (project No. ERC-2015-CoG-682859), and by the Research Cluster "The Adaptive Mind" funded by the Excellence Program of the Hessian Ministry of Higher Education, Science, Research, and Art.
DOI: 10.6084/m9.figshare.19246167.v4
title: Historical long-term cultivar×climate suitability data to inform viticultural adaptation to climate change

description: The subset1 was created by digitizing and curating the seminal report of Amerine and Winkler (1944), which provided grape harvest dates (GHDs), the quality of musts and wines, and wine tasting notes for 148 cultivars from 1935-1941 across five contrasting climatic regions of California. To put this dataset into a climate change context, we collected GHDs and must<sup> </sup>sugar content (<sup>o</sup>Brix) records from 1991 to 2018 for four representative cultivars in one of the five studied regions (Napa) in subset2. Finally, we integrated meteorological data of the five regions during 1911-2018 and calculated bioclimatic indices important for grape in subset3. The resulting database is unique and valuable for assessing the fitness between cultivars across environments in order to mitigate the effects of climate change.
DOI: 10.34740/kaggle/ds/2195848
title: DEVANAGARI CHARACTER SET
DOI: 10.5281/zenodo.6559804
title: Robustness of organ morphology is associated with modules of co-expressed genes related to plant cell wall

description: Reproducibility in organ size and shape is a fundamental trait of living organisms. The mechanisms underlying such robustness remain, however, to be elucidated. In the manuscript <strong>"Robustness of organ morphology is associated with modules of co-expressed genes related to plant cell wall", </strong>doi: https://doi.org/10.1101/2022.04.26.489498, we took the sepal of Arabidopsis as a model, and we investigated whether variability of gene expression plays a role in variation of organ morphology. To address this question, we produced a dataset composed of both transcriptomic and morphological information obtained from 27 individual sepals from wild-type plants. This repository contains the raw confocal image of 30 sepals used as starting point for the analysis, as well as their extracted contours as binary images. These images were used to recover the 3D shape of the sepals. The 30 abaxial sepals were collected at early stage 11, from three different Col-0 wild-type plants, labeled D, E and F, grown simultaneously in experimentally controlled standard conditions. Each sepal was imaged under a confocal microscope using autofluorescence. Immediately following imaging, the sepal was frozen in liquid nitrogen for RNA extraction, on which an RNA-seq analysis was performed. <strong>Related informations :</strong> The repository of the numerical tools used for 3D shape extraction as well as the results of geometrical measurements is here. The repository of RNA-Seq analysis results of these same sepals is here. And the analysis tools used to relate geometrical measurements to RNA-seq data are here.
DOI: 10.5281/zenodo.6559803
title: Robustness of organ morphology is associated with modules of co-expressed genes related to plant cell wall

description: Reproducibility in organ size and shape is a fundamental trait of living organisms. The mechanisms underlying such robustness remain, however, to be elucidated. In the manuscript <strong>"Robustness of organ morphology is associated with modules of co-expressed genes related to plant cell wall", </strong>doi: https://doi.org/10.1101/2022.04.26.489498, we took the sepal of Arabidopsis as a model, and we investigated whether variability of gene expression plays a role in variation of organ morphology. To address this question, we produced a dataset composed of both transcriptomic and morphological information obtained from 27 individual sepals from wild-type plants. This repository contains the raw confocal image of 30 sepals used as starting point for the analysis, as well as their extracted contours as binary images. These images were used to recover the 3D shape of the sepals. The 30 abaxial sepals were collected at early stage 11, from three different Col-0 wild-type plants, labeled D, E and F, grown simultaneously in experimentally controlled standard conditions. Each sepal was imaged under a confocal microscope using autofluorescence. Immediately following imaging, the sepal was frozen in liquid nitrogen for RNA extraction, on which an RNA-seq analysis was performed. <strong>Related informations :</strong> The repository of the numerical tools used for 3D shape extraction as well as the results of geometrical measurements is here. The repository of RNA-Seq analysis results of these same sepals is here. And the analysis tools used to relate geometrical measurements to RNA-seq data are here.
DOI: 10.12751/g-node.5vkndd
title: In-vivo egfp expression in the honeybee Apis mellifera induced by electroporation and viral expression vector

description: In this study we describe egfp expression induced by two techniques: in vivo electroporation and viral transduction in several cell types of the adult honeybee brain. Non-neuronal and neuronal cell types were identified and the expression persisted at least during three days. Kenyon cells, optic lobe neurons and protocerebral lobe neurons were electroporated. Astrocyte-like glia cells, fibrous lamellar glia cells and cortex glia cells were identified. Viral transduction targeted one specific type of glia cells that could not be identified. EGFP positive cells types were rather variable after electroporation, and viral transduction resulted in more homogenous groups of positive cells. We propose that these techniques remain a good alternative to transgenic animals because they potentially target only somatic cells.
description: IsSupplementTo: In-vivo egfp expression in the honeybee Apis mellifera induced by electroporation and viral expression vector. Gérard Leboulle, Nora Gehne, Anja Froese, Randolf Menzel. Accepted for publication in PLoS ONE.
DOI: 10.5066/p9alzz3e
title: Electron microprobe analyses of sphalerite and hemimorphite from mine wastes from the Tar Creek Superfund Site, Tri-State Mining District, Oklahoma, U.S.A.

description: Electron microprobe analyses of sphalerite (ZnS) and hemimorphite (Zn4Si2O7(OH)2·H2O) from sampled historical waste piles were conducted with a specific focus on germanium (Ge). In mine wastes at the Tar Creek Superfund Site, Oklahoma, USA, Ge is associated with ZnS (sphalerite) as expected, but weathering in the waste piles has led to a significant amount of Ge being incorporated into a zinc-silicate, hemimorphite. Data and methods reported are part of a research study published below in the 'Related External Resources' section.
DOI: 10.5281/zenodo.6565803
title: The effect of various orthodontic treatments on facial attractiveness. A systematic review and meta-analysis.

description: <strong>Abstract</strong> <strong>Background: </strong>Facial and smile attractiveness are significant motivating factor for patients to seek orthodontic treatment. Although there is a general belief that orthodontic treatment improves facial appearance, this has yet not been systematically evaluated. <strong>Objectives:</strong> To assess the current evidence on the effect of orthodontic treatment on facial attractiveness. <strong>Search Methods:</strong> Systematic and unrestricted search of nine databases were performed up to January 2022. <strong>Selection Criteria: </strong>Studies evaluating facial attractiveness before and after orthodontic treatment. <strong>Data Collection and Analysis: </strong>Extracted data included study design and setting, sample size and demographics, malocclusion type, treatment modality and method for outcome assessment. Risk of bias was assessed with the ROBINS-I tool for non-randomised studies and with RoB-2 for randomized controlled trials. Random-effects meta-analyses of mean differences and their 95% confidence intervals (CIs) were performed. <strong>Results: </strong>Twenty studies were included in data synthesis; three randomized controlled clinical trials and 17 non-randomized clinical studies of retrospective or prospective design. One of the randomized controlled trials was found to have low risk of bias, one presented some concerns and the third showed a high risk of bias. All non-randomized studies showed either unclear or high risk of bias. Data syntheses showed that orthodontic treatment improved facial attractiveness ratings by 9% when compared to untreated controls (MD: 9.05 / 95% CI: 4.71; 13.39). A combination of orthodontics and orthognathic surgery also showed a positive effect of 5.5% (MD: 5.51 / 95% CI: 1.55; 9.47) when compared to orthodontic treatment alone. There was no difference in effect between extraction and non-extraction treatments (MD: -0.89 / 95% CI: -8.72; 6.94) or between different types of Class II correctors (MD:2.21 / 95% CI: -16.51; 20.93). <strong>Limitations: </strong>With the exception of 2 RCTs, included studies were of unclear or low quality. <strong>Conclusions:</strong> Orthodontic treatment has a clinically weak effect on facial attractiveness when compared to no treatment. The same is true when a combined orthodontic/surgical treatment is compared to orthodontics alone. <strong>Registration:</strong> PROSPERO #: CRD42020169904 <strong>Conflict of Interest: </strong>None <strong>Funding:</strong> None
DOI: 10.5281/zenodo.6565802
title: The effect of various orthodontic treatments on facial attractiveness. A systematic review and meta-analysis.

description: <strong>Abstract</strong> <strong>Background: </strong>Facial and smile attractiveness are significant motivating factor for patients to seek orthodontic treatment. Although there is a general belief that orthodontic treatment improves facial appearance, this has yet not been systematically evaluated. <strong>Objectives:</strong> To assess the current evidence on the effect of orthodontic treatment on facial attractiveness. <strong>Search Methods:</strong> Systematic and unrestricted search of nine databases were performed up to January 2022. <strong>Selection Criteria: </strong>Studies evaluating facial attractiveness before and after orthodontic treatment. <strong>Data Collection and Analysis: </strong>Extracted data included study design and setting, sample size and demographics, malocclusion type, treatment modality and method for outcome assessment. Risk of bias was assessed with the ROBINS-I tool for non-randomised studies and with RoB-2 for randomized controlled trials. Random-effects meta-analyses of mean differences and their 95% confidence intervals (CIs) were performed. <strong>Results: </strong>Twenty studies were included in data synthesis; three randomized controlled clinical trials and 17 non-randomized clinical studies of retrospective or prospective design. One of the randomized controlled trials was found to have low risk of bias, one presented some concerns and the third showed a high risk of bias. All non-randomized studies showed either unclear or high risk of bias. Data syntheses showed that orthodontic treatment improved facial attractiveness ratings by 9% when compared to untreated controls (MD: 9.05 / 95% CI: 4.71; 13.39). A combination of orthodontics and orthognathic surgery also showed a positive effect of 5.5% (MD: 5.51 / 95% CI: 1.55; 9.47) when compared to orthodontic treatment alone. There was no difference in effect between extraction and non-extraction treatments (MD: -0.89 / 95% CI: -8.72; 6.94) or between different types of Class II correctors (MD:2.21 / 95% CI: -16.51; 20.93). <strong>Limitations: </strong>With the exception of 2 RCTs, included studies were of unclear or low quality. <strong>Conclusions:</strong> Orthodontic treatment has a clinically weak effect on facial attractiveness when compared to no treatment. The same is true when a combined orthodontic/surgical treatment is compared to orthodontics alone. <strong>Registration:</strong> PROSPERO #: CRD42020169904 <strong>Conflict of Interest: </strong>None <strong>Funding:</strong> None
DOI: 10.6084/m9.figshare.19803484
title: Bai file of SRR3414629 sample

description: Bai file of SRR3414629 sample
DOI: 10.6084/m9.figshare.19803484.v1
title: Bai file of SRR3414629 sample

description: Bai file of SRR3414629 sample
DOI: 10.6084/m9.figshare.19246167
title: dataset

description: The subset1 was created by digitizing and curating the seminal report of Amerine and Winkler (1944), which provided grape harvest dates (GHDs), the quality of musts and wines, and wine tasting notes for 148 cultivars from 1935-1941 across five contrasting climatic regions of California. To put this dataset into a climate change context, we collected GHDs and must<sup> </sup>sugar content (<sup>o</sup>Brix) records from 1991 to 2018 for four representative cultivars in one of the five studied regions (Napa) in subset2. Finally, we integrated meteorological data of the five regions during 1911-2018 and calculated bioclimatic indices important for grape in subset3. The resulting database is unique and valuable for assessing the fitness between cultivars across environments in order to mitigate the effects of climate change.
DOI: 10.6084/m9.figshare.19246167.v5
title: dataset

description: The subset1 was created by digitizing and curating the seminal report of Amerine and Winkler (1944), which provided grape harvest dates (GHDs), the quality of musts and wines, and wine tasting notes for 148 cultivars from 1935-1941 across five contrasting climatic regions of California. To put this dataset into a climate change context, we collected GHDs and must<sup> </sup>sugar content (<sup>o</sup>Brix) records from 1991 to 2018 for four representative cultivars in one of the five studied regions (Napa) in subset2. Finally, we integrated meteorological data of the five regions during 1911-2018 and calculated bioclimatic indices important for grape in subset3. The resulting database is unique and valuable for assessing the fitness between cultivars across environments in order to mitigate the effects of climate change.
DOI: 10.5066/p92mxfiq
title: Elemental concentrations for bulk and size-fractionated mine waste from the Tar Creek Superfund Site, Tri-State Mining District, Oklahoma, U.S.A.

description: Elemental concentrations for bulk and size-fractionated mine waste from sampled historical waste piles from the Tar Creek Superfund Site, Oklahoma, U.S. were determined after dissolution via acid digests or a sodium peroxide fusion. Elemental concentrations were determined for the leachate from a simulated rainwater leach of mine wastes. Data and methods reported are part of a research study published below in the 'Related External Resources' section.
DOI: 10.5281/zenodo.6556767
title: JEMMA 50KC Methods [FULLPATH] - BACKUP

description: JEMMA 50KC Methods [FULLPATH] [BACKUP] &gt; file: Giganticode_FINAL_DB_methods_ED.csv<br> &gt; size: 10.3 GB<br> &gt; num_rows: 8,556,069<br> &gt; columns: project_id, class_id, method_id, method_path, method_name, start_line, end_line, method_tokens, method_text
DOI: 10.5281/zenodo.6556766
title: JEMMA 50KC Methods [FULLPATH] - BACKUP

description: JEMMA 50KC Methods [FULLPATH] [BACKUP] &gt; file: Giganticode_FINAL_DB_methods_ED.csv<br> &gt; size: 10.3 GB<br> &gt; num_rows: 8,556,069<br> &gt; columns: project_id, class_id, method_id, method_path, method_name, start_line, end_line, method_tokens, method_text
DOI: 10.17903/fk2/d4soze
title: Πολιτικά πρότυπα και πολιτική συμπεριφορά, Φεβρουάριος - Μάρτιος 2004

description: Η έρευνα πολιτικών προτύπων και πολιτικής συμπεριφοράς διεξήχθη από το Εθνικό Κέντρο Κοινωνικών Ερευνών προκειμένου να μελετήσει τις μορφές και τους τρόπους πρόσληψης των πολιτικών πληροφοριών τις στάσεις απέναντι στη δημοκρατία, καθώς και τις βασικές αξιακές κατευθύνσεις οι οποίες, σε αρκετά πολιτικά συστήματα, αποτελούν το όχημα για την εκλογική κινητοποίηση. Η έρευνα διεξήχθη σε 2 κύματα με τη μορφή "πάνελ" κατά τις εκλογές της 7ης Μαρτίου του 2004. Το πρώτο κύμα διενεργήθηκε προεκλογικά και το δεύτερο μετεκλογικά. Και στα 2 κύματα το δείγμα της έρευνας ήταν 1307 άτομα. Η έρευνα πραγματοποιήθηκε στα πλαίσια ενός διεθνούς προγράμματος συγκριτικής πολιτικής με τίτλο «Συγκριτικό Πρόγραμμα Εθνικών Εκλογών» (Comparative National Elections Project - CNEP III). Το CNEP είχε προηγηθεί στις εκλογές της 22ας Σεπτεμβρίου του 2004 (Comparative National Elections Project - CNEP IIΙ). Το CNEP (Comparative National Elections Project) είναι ένα πολύ-εθνικό πρόγραμμα στο οποίο έχουν συμπράξει κορυφαίοι επιστήμονες και ερευνητές με στόχο να μελετήσουν τις ιδιαίτερες πτυχές της πολιτικής επικοινωνίας και της κοινωνικής δομής στο πλαίσιο μιας προεκλογικής εκστρατείας.
DOI: 10.6084/m9.figshare.19803499
title: Script

description: The file consists of the script used for the manuscript: <strong>Evaluation of sampling methods for maturation stage determination in the European eel</strong> <br>
DOI: 10.6084/m9.figshare.19803499.v1
title: Script

description: The file consists of the script used for the manuscript: <strong>Evaluation of sampling methods for maturation stage determination in the European eel</strong> <br>
DOI: 10.5517/ccdc.csd.cc23n3gc
title: CCDC 1955742: Experimental Crystal Structure Determination

description: Related Article: Wenjuan Xu, Yujie Zhao, Huarui Wang, Hongfei Wang, Fangfang Pan, Ruixue Xu, Hongwei Hou|2021|Chem.-Eur.J.|27|5011|doi:10.1002/chem.202005474
DOI: 10.5281/zenodo.6566802
title: The impact of music and stretched time on pupillary responses and eye movements in slow-motion film scenes

description: Dataset of the article "The impact of music and stretched time on pupillary responses and eye movements in slow-motion film scenes" published in Journal of Eye Movement Research.
description: This study investigated the effects of music and playback speed on arousal and visual perception in slow-motion scenes taken from commercial films. Slow-motion scenes are a ubiquitous film technique and highly popular. Yet the psychological effects of mediated time-stretching compared to real-time motion have not been empirically investigated. We hypothesised that music affects arousal and attentional processes. Furthermore, we assumed that playback speed influences viewers' visual perception, resulting in a higher number of eye movements and larger gaze dispersion. Thirty-nine participants watched three film excerpts in a repeated-measures design in conditions with or without music and in slow motion vs. adapted real-time motion (both visual-only). Results show that music in slow-motion film scenes leads to higher arousal compared to no music as indicated by larger pupil diameters in the former. There was no systematic effect of music on visual perception in terms of eye movements. Playback speed influenced visual perception in eye movement parameters such that slow motion resulted in more and shorter fixations as well as more saccades compared to adapted real-time motion. Furthermore, in slow motion there was a higher gaze dispersion and a smaller centre bias, indicating that individuals attended to more detail in slow motion scenes.
DOI: 10.5281/zenodo.6566801
title: The impact of music and stretched time on pupillary responses and eye movements in slow-motion film scenes

description: Dataset of the article "The impact of music and stretched time on pupillary responses and eye movements in slow-motion film scenes" published in Journal of Eye Movement Research.
description: This study investigated the effects of music and playback speed on arousal and visual perception in slow-motion scenes taken from commercial films. Slow-motion scenes are a ubiquitous film technique and highly popular. Yet the psychological effects of mediated time-stretching compared to real-time motion have not been empirically investigated. We hypothesised that music affects arousal and attentional processes. Furthermore, we assumed that playback speed influences viewers' visual perception, resulting in a higher number of eye movements and larger gaze dispersion. Thirty-nine participants watched three film excerpts in a repeated-measures design in conditions with or without music and in slow motion vs. adapted real-time motion (both visual-only). Results show that music in slow-motion film scenes leads to higher arousal compared to no music as indicated by larger pupil diameters in the former. There was no systematic effect of music on visual perception in terms of eye movements. Playback speed influenced visual perception in eye movement parameters such that slow motion resulted in more and shorter fixations as well as more saccades compared to adapted real-time motion. Furthermore, in slow motion there was a higher gaze dispersion and a smaller centre bias, indicating that individuals attended to more detail in slow motion scenes.
DOI: 10.6084/m9.figshare.19803550
title: soil physicochemical information under plant invasion

description: soil physicochemical information under plant invasion along China's coast
DOI: 10.6084/m9.figshare.19803550.v1
title: soil physicochemical information under plant invasion

description: soil physicochemical information under plant invasion along China's coast
DOI: 10.6084/m9.figshare.19803286
title: Bam file of SRR3414629 sample

description: Alignment bam file of mouse embryonic fibroblasts, sample SRR3414629
DOI: 10.6084/m9.figshare.19803286.v1
title: Bam file of SRR3414629 sample

description: Alignment bam file of mouse embryonic fibroblasts, sample SRR3414629
DOI: 10.25625/uqa2rz/wsophh
title: Ramos.2022.PeerJ_CanopySpider BodyLength Body Width TotalBiomass.tab

description: :unav
DOI: 10.25625/uqa2rz
title: Ramos.2022.PeerJ_CanopySpider BodyLength Body Width TotalBiomass

description: average body length and body width of canopy spiders, measured from 15 randomly selected individuals including juveniles, and total spider biomass as calculated using the LWRT model for tropic Araneae in Sohlstöm et al (Sohlström, EH, Marian, L, Barnes, AD, et al. Applying generalized allometric regressions to predict live body mass of tropical and temperate arthropods. Ecol Evol. 2018; 8: 12737– 12749. https://doi.org/10.1002/ece3.4702)
DOI: 10.6084/m9.figshare.14208551
title: S1 Table. Sampling stations for the oceanographic cruise in the Sergipe-Alagoas sedimentary basin held in May 2014 on board the Seward Johnson Research Vessel.

description: Sampling stations for the oceanographic cruise in the Sergipe-Alagoas sedimentary basin held in May 2014 on board the Seward Johnson Research Vessel.
DOI: 10.6084/m9.figshare.14208551.v5
title: S1 Table. Sampling stations for the oceanographic cruise in the Sergipe-Alagoas sedimentary basin held in May 2014 on board the Seward Johnson Research Vessel.

description: Sampling stations for the oceanographic cruise in the Sergipe-Alagoas sedimentary basin held in May 2014 on board the Seward Johnson Research Vessel.