cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14927131
title: Advancing C stock prediction

description: 1.     Ground-Measured Carbon Stock Data

Field-measured above-ground biomass (AGB) and carbon stock estimates for forest plots in Nyanga District, Zimbabwe. Stored in CSV format, including plot locations, tree species, DBH, and estimated carbon stock.

2.     Sentinel-2 remote sensing data

Derived vegetation indices (NDVI, EVI, SAVI, etc.) for the study area as csv

3.     Geospatial data

Shapefiles of sampling locations, elevation, and land use maps.
DOI: 10.17632/8jrxj4rghk
title: Taylor-Chirikov map package A package of programs for the calculation of ordered periodic orbits of area preserving twist maps

description: Title of program: TAYLOR-CHIRIKOV MAP PACKAGE Catalogue Id: ABBW_v1_0 Nature of problem The study of area preserving twist maps of the plane is important for many fields of physics including Hamiltonian dynamics, plasma confinement, particle accelerator design and condensed matter physics. This is a package of programs to facilitate the calculation of ordered periodic orbits of these maps, particularly in the presence of large nonlinearities. Versions of this program held in the CPC repository in Mendeley Data ABBW_v1_0; TAYLOR-CHIRIKOV MAP PACKAGE; 10.1016/0010-4655(88)90159-2 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/j4vyzc2j9n
title: A general program to calculate atomic continuum processes using the R-matrix method

description: Title of program: RMATRX STG1 Catalogue Id: AAHA_v1_0 Nature of problem This program calculates all one-electron, two electron and multipole radial integrals involving the bound and continuum orbitals necessary to enable electron atom or ion scattering, photoionization or frequency dependent polarizabilities to be calculated for a general atomic system. The bound orbitals are specified analytically. The continuum orbitals are calculated by the program. The integrals are stored on a permanent tape or disc file for use by RMATRX STG2. Versions of this program held in the CPC repository in Mendeley Data AAHA_v1_0; RMATRX STG1; 10.1016/0010-4655(74)90096-4 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/pp7jt473m4
title: The long noncoding RNA Paupar modulates PAX6 regulatory activities to promote alpha cell development and function
DOI: 10.17632/tkmxw2n9fy
title: A Fortran program for calculating electron or hole mobility in disordered semiconductors from first-principles

description: Abstract A Fortran program is developed to calculate charge carrier (electron or hole) mobility in disordered semiconductors from first-principles. The method is based on non-adiabatic ab initio molecular dynamics and static master equation, treating dynamic and static disorder on the same footing. We have applied the method to calculate the hole mobility in disordered poly(3-hexylthiophene) conjugated polymers as a function of temperature and electric field and obtained excellent agreements with expe... Title of program: FPMu Catalogue Id: AEJV_v1_0 Nature of problem Determine carrier mobility from first-principles in disordered semiconductors as a function of temperature, electric field and carrier concentration. Versions of this program held in the CPC repository in Mendeley Data AEJV_v1_0; FPMu; 10.1016/j.cpc.2011.07.016 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/vht8x7y8t5
title: A basis-set based Fortran program to solve the Gross–Pitaevskii equation for dilute Bose gases in harmonic and anharmonic traps

description: Abstract Inhomogeneous boson systems, such as the dilute gases of integral spin atoms in low-temperature magnetic traps, are believed to be well described by the Gross–Pitaevskii equation (GPE). GPE is a nonlinear Schrödinger equation which describes the order parameter of such systems at the mean field level. In the present work, we describe a Fortran 90 computer program developed by us, which solves the GPE using a basis set expansion technique. In this technique, the condensate wave function (order... Title of program: bose.x Catalogue Id: ADWZ_v1_0 Nature of problem It is widely believed that the static properties of dilute Bose condensates, as obtained in atomic traps, can be described to a fairly good accuracy by the time-independent Gross-Pitaevskii equation. This program presents an efficient approach to solving this equation. Versions of this program held in the CPC repository in Mendeley Data ADWZ_v1_0; bose.x; 10.1016/j.cpc.2005.10.014 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/vxxm9th6n4
title: A version of a nuclear optical model code for small computers designed to run on a PDP-15

description: Abstract Title of program: OPTIX KSU 1 Catalogue number: ACRR Program obtainable from: CPC Program Library, Queen's University of Belfast, N. Ireland (see application form in this issue). Computer: PDP-15; Installation: Department of Physics, Kansas State University, Manhattan, Kansas, USA. Operating system: BF Programming language used: Fortran IV High speed storage required: 14K words No. of bits in a word: 18 for integer variable. 2 words per floating-point variable. Overlay structure: Overlaid No.... Title of program: OPTIX KSU1 Catalogue Id: ABOU_v2_0 [ACRR] Nature of problem This is a version of the program OPTICS which has been modified to run on the PDP-15 computer. Versions of this program held in the CPC repository in Mendeley Data ABOU_v1_0; OPTICS; 10.1016/0010-4655(73)90013-1 ABOU_v2_0; OPTIX KSU1; 10.1016/0010-4655(74)90031-9 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/kj82vsbd7w
title: HYMNISBLOCK — Eigenvalue solver for blocked matrices

description: Title of program: HYMBLO Catalogue Id: ABVI_v1_0 Nature of problem Multidimensional stability problems lead to huge eigenvalue problems of the type Ax = lambdaBx, which are only solvable when the matrix structures are not touched. In this package, A and B have block diagonal form. Versions of this program held in the CPC repository in Mendeley Data ABVI_v1_0; HYMBLO; 10.1016/0010-4655(80)90019-3 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/yc4hn6sdrm
title: A computer program for calculation of the coriolis effect in odd-A nuclei

description: Title of program: CORIOL Catalogue Id: ABQF_v1_0 Nature of problem In recent years, many papers have been devoted to the particle-rotation coupling (Coriolis effect) in nuclei. Dramatic perturbations due to strong Coriolis coupling are observed in the rotational bands associated with high-j intrinsic states. Calculations, in which the nilsson model was extended to include Coriolis coupling and pairing interaction, in manycases successfully explain the observed peculiar structure of the rotational bands. The present program calculates the perturbed rotational en ... Versions of this program held in the CPC repository in Mendeley Data ABQF_v1_0; CORIOL; 10.1016/0010-4655(77)90028-5 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/43wdty4n8b
title: Do outsiders listen to insiders

description: Do outsiders listen to insiders. Raw data.
DOI: 10.17632/mjh3c5y56f
title: Data for: Bacterial communities in Haemaphysalis, Dermacentor and Amblyomma ticks collected from wild boars of an Orang Asli Community in Malaysia

description: Supplementary Materials Table S.1 V6 amplicon sequencing results for each tick sample. This table file provides the number of reads pre- and post- quality filtering for each tick sample. Table S.2 Relative abundance of the bacterial taxa in each tick sample. This table provides for the complete list of the bacterial taxa and the associated relative abundance in each of the tick sample.
DOI: 10.17632/mndnrv8bvf
title: Input Enhancement Dataset

description: This is the dataset of the results of an input enhancement experiment consisting of 4 groups: true control (no treatment), control (plain text), experimental 1 (instances of 3rd person -s colored red and underlined, and experimental 2 (instances of 3rd person verbs were enlared to 2x size). The assessment materials (available via IRIS repository) were a 30-item grammatical judgement task, 20-items of which related to 3rd person -s. The other 10 items were distractor items and not counted towards the final score. The maximum possible score is therefore 20/20.
DOI: 10.17632/zbbgvgzj42
title: Data for: Laboratory-scale investigation of the 3-D geometry of landslide dams in a U-shaped valley

description: The data includes the point cloud data of 7 sets of the three-dimensional geometry of landslide dams measured in this paper. These are the raw data for figures 3 and 4 in the manuscript. The data in excel format are 42 historical cases of landslide dams, including the occurrence site of landslide dam and detailed geometry parameters.
DOI: 10.17632/96fxpzxn5s
title: Absolute cross sections of compound nucleus reactions

description: Abstract The program SEEF is a Fortran IV computer code for the extraction of absolute cross sections of compound nucleus reactions. When the evaporation residue is fed by its parents, only cumulative cross sections will be obtained from off-line gamma ray measurements. But, if one has the parent excitation function (experimental or calculated), this code will make it possible to determine absolute cross sections of any exit channel. Title of program: SEEF Catalogue Id: ACPJ_v1_0 Nature of problem One of the experimental methods used to determine cross sections of compound nucleus reactions is based on gamma rays measurements. These rays are emitted during the radioactive decay of evaporation residues. Nevertheless, when the compound nucleus evaporates charged particles, the result evaporation residue is fed by his parents during and after irradiation. So, one cannot talk of absolute cross sections in these cases. Versions of this program held in the CPC repository in Mendeley Data ACPJ_v1_0; SEEF; 10.1016/0010-4655(93)90185-F This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.25934/pr00011031.0
title: Available datapackage for study 'A Phase III, Open-Label, Randomized Study to Investigate the Efficacy and Safety of Atezolizumab (Anti-PD-L1 Antibody) Compared With Best Supportive Care Following Adjuvant Cisplatin-Based Chemotherapy in Patients With Completely Resected Stage IB-IIIA Non-Small Cell Lung Cancer'

description: This is a Phase III, global, multicenter, open-label, randomized study to compare the efficacy and safety of 16 cycles (1 cycle duration=21 days) of atezolizumab (MPDL3280A) treatment compared with best supportive care (BSC) in participants with Stage IB-Stage IIIA non-small cell lung cancer (NSCLC) following resection and adjuvant chemotherapy, as measured by disease-free survival (DFS) as assessed by the investigator and overall survival (OS). Participants, after completing up to 4 cycles of adjuvant cisplatin-based chemotherapy, will be randomized in a 1:1 ratio to receive atezolizumab for 16 cycles or BSC.
DOI: 10.17632/hj44rbj6fj
title: Automatic generation of analytical matrix elements for electron-atom scattering

description: Abstract A code which can be used to automatically generate entire sets of analytical matrix elements of the instantaneous electrostatic interaction potential between the projectile electron and the target atom is described. The code can be used at present for both hydrogen and helium target atoms. In the case of hydrogen, the present code Vij generalizes and extends an earlier code of Jamison [1]; while in the case of helium, Hartree-Fock frozen-core wave-functions are used to represent the two-elect... Title of program: Vij Catalogue Id: ADAX_v1_0 Nature of problem Generation of individual or complete sets of analytical interaction matrix elements for use in electron-atom scattering codes. Versions of this program held in the CPC repository in Mendeley Data ADAX_v1_0; Vij; 10.1016/0010-4655(94)00163-V This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/c2kpzr7xxj
title: Data for: Heterogeneous Lithospheric Mantle beneath the Southeastern Tibet Plateau: Evidences from Cenozoic high-Mg potassic volcanic rocks in the Jinshajiang-Ailaoshan Cenozoic Magmatic Belt
DOI: 10.17632/x89n3k9tg3
title: HASPRNG: Hardware Accelerated Scalable Parallel Random Number Generators

description: Abstract The Scalable Parallel Random Number Generators library (SPRNG) supports fast and scalable random number generation with good statistical properties for parallel computational science applications. In order to accelerate SPRNG in high performance reconfigurable computing systems, we present the Hardware Accelerated SPRNG library (HASPRNG). Ported to the Xilinx University Program (XUP) and Cray XD1 reconfigurable computing platforms, HASPRNG includes the reconfigurable logic for Field Programma... Title of program: HASPRNG Catalogue Id: AEER_v1_0 Nature of problem Many computational science applications are able to consume large numbers of random numbers. For example, Monte Carlo simulations such as α-estimation are able to consume limitless random numbers for the computation as long as hardware resources for the computing are supported. Moreover, parallel computational science applications require independent streams of random numbers to attain statistically significant results. The SPRNG library provides this capability, but at a significant computation ... Versions of this program held in the CPC repository in Mendeley Data AEER_v1_0; HASPRNG; 10.1016/j.cpc.2009.07.002 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/gp2bbjm6cf
title: ELF and GNOME: Two tiny codes to evaluate the real zeros of the Bessel functions of the first kind for real orders

description: Abstract Two codes to evaluate the real zeros (j_(v,s)) of the Bessel functions of the first kind J_v (x) for real orders v are presented. The codes are based on a Newton-Raphson iteration over the monotonic function f_v (x) = x^(2v-1)J_v (x)/J_(v-x)(x). The code ELF is a remarkably short program for finding, given any starting value x_0 &gt;0 and any real order, the zero of J_v (x) in the neighborhood of x_0(x_0and the zero in the same branch of f_v (x)). GNOME is a modification of ELF for fi... Title of program: ELF, GNOME Catalogue Id: ADJY_v1_0 Nature of problem We include two codes in order to evaluate the zeros of first kind Bessel functions for real orders nu: The subroutine ELF finds the zero jnu,s of the first kind Bessel function Jnu(x) in the neighbourhood of a given starting value x0 (x0 and jnu,s in the same branch of Hnu(x)=Jnu(x)/Jnu-1(x)). The subroutine GNOME finds the zeros in a given interval [xmin, xmax]. The zeros of first kind Bessel functions appear in the solution of many different physical and engineering applications: wave guides, ... Versions of this program held in the CPC repository in Mendeley Data ADJY_v1_0; ELF, GNOME; 10.1016/S0010-4655(98)00193-3 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/m795kbyhvr
title: Generating and using truly random quantum states in Mathematica

description: Abstract The problem of generating random quantum states is of a great interest from the quantum information theory point of view. In this paper we present a package for Mathematica computing system harnessing a specific piece of hardware, namely Quantis quantum random number generator (QRNG), for investigating statistical properties of quantum states. The described package implements a number of functions for generating random states, which use Quantis QRNG as a source of randomness. It also provides... Title of program: TRQS Catalogue Id: AEKA_v1_0 Nature of problem Generation of random density matrices. Versions of this program held in the CPC repository in Mendeley Data AEKA_v1_0; TRQS; 10.1016/j.cpc.2011.08.002 AEKA_v2_0; TRQS; 10.1016/j.cpc.2012.08.012 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/nw7bx2wwpk
title: Procedures for the evaluation of atomic transition matrix elements in the interaction with laser light

description: Abstract Analytical and numerical procedures for the calculation of atomic transition matrix elements in the interaction with linearly and circularly polarized laser light are presented. The laser—atom interaction is treated beyond the dipole approximation. The procedures are derived explicitly for hydrogen but may be readily generalized to other one-electron systems with, e.g., quantum defect type radial wavefunctions. The numerical procedure is programmed in Matlab and tested for main quantum number... Title of program: fnodipol Catalogue Id: ADKO_v1_0 Nature of problem Calculation of exact matrix elements between hydrogenic states perturbed by linearly or circularly polarized laser light. The different functions which are called by the main code, fnodipol, allows the evaluation of the radial hydrogen wavefunction and its derivative, spherical harmonics, the integral of a product of three spherical harmonics, 3-j symbols and Clebsch-Gordan coefficients. Versions of this program held in the CPC repository in Mendeley Data ADKO_v1_0; fnodipol; 10.1016/S0010-4655(99)00250-7 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/xfcfpbz8tj
title: Transcriptional regulatory network of developing mouse telencephalon

description: In mouse, a vesicle forms at the anterior part of the developing embryo at 9.5 day/stage (M9.5), which further develops into telencephalon at M10.5 day/stage. The equivalent stages in chick embryo are referred to as HH17 and HH24. We sequenced RNA populations from telencephalic region at the early (M9.5 and HH17) and late stages (M10.5 and HH24) of mouse and chick embryo. Four samples were sequenced for each stage of telencephalon development. The resulting RNA sequencing reads were used to assemble transcripts and for counting their abundance. The read counts for each transcript then used to compute its differential expression between M9.5 and M10.5 stages in mouse. Likewise, each chick transcript was compared between H17 and HH24 stages. Genes having significant p-values with positive log2 -fold change represent increased expression at developmental stage B (late) compared to stage A (early) and are referred to as up-regulated (UP). Likewise, genes with negative log2-fold change represent decreased expression at stage B compared to stage A and are referred to as down-regulated (Down, DN). Gene expression with p-values above 0.05 was considered non-significant and represents no change between stage B and stage A and is referred to as no change (NC). Genes with read count roughly less than five in less than four samples were considered not expressed and referred to as NE. These four groups of genes were further categorized into sixteen groups based on the expression status of mouse and chick gene orthologs. These sixteen gene groups; UP, DN, NC, and NE mouse gene groups; and a gene group composed of all differentially expressed genes in mouse (DEG), were submitted to iRegulon Cytoscape plugin for predicting their transcriptional regulatory factors. These gene groups and iRegulon prediction results for each of the groups are provided as datasets. Using significant iRegulon prediction results, we reconstructed transcriptional regulatory network for mouse telencephalon development, which is also provided as network file. In addition to a single excel file containing results for some of the gene groups where we found meaningful connection between the predicted transcription factors and their differentially expressed targets genes.
DOI: 10.17632/phvswbp7xf
title: High performance computing aspects of a dimension independent semi-Lagrangian discontinuous Galerkin code

description: Abstract The recently developed semi-Lagrangian discontinuous Galerkin approach is used to discretize hyperbolic partial differential equations (usually first order equations). Since these methods are conservative, local in space, and able to limit numerical diffusion, they are considered a promising alternative to more traditional semi-Lagrangian schemes (which are usually based on polynomial or spline interpolation). In this paper, we consider a parallel implementation of a semi-Lagrangian disconti... Title of program: sldg Catalogue Id: AEZO_v1_0 Nature of problem An approximate solution of the advection equation is computed using the semi-Lagrangian discontinuous Galerkin method. This procedure is used as the fundamental building block in a splitting based Vlasov solver. Versions of this program held in the CPC repository in Mendeley Data AEZO_v1_0; sldg; 10.1016/j.cpc.2016.01.012 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/vkhm7vgvyn
title: Flow Regime Changes under Future Climate and Land Cover Scenarios in the Upper Beas basin of Himalaya using SWAT model

description: The research aimed to find the monthly, seasonal and annual trends in rainfall and temperature at Manali, Bhuntar and Katrain stations in the Upper Beas basin along the western Himalyas. The trends analysis found varying trends at these stations. A major observation is that the minimum temperature in increasing especially during winter period in this area. The trend analysis has been carried out using MK test at monthly, seasonal and annual scales The daily observed data has been collected for the 3 monitoring stations. The data is available in Indian daily weather report of the India Meteorological Department.
DOI: 10.17632/fppvbn66hv
title: Prioritize Efficiently: Layer Selection in Network Coding - Research Data Addendum

description: This research data addendum contains both the raw simulation results and aggregated simulation results that give average values and confidence intervals (which is just one possible way to aggregate the information, and which is the basis for figures in our research article). The research data shown is described in detail in our research article. Find below the data format summary. Raw information follows an eight-column comma separated value format. Each row of raw information corresponds to an event at which a new layer could be decoded by a node. Rows of multiple simulation runs are concatenated. Columns contain the following information: (1) an index of the prioritization strategy (2) the distance in meters between nodes for grid topologies, or for random disc topologies, the inverse node density in meters disc radius per node (3) the feedback ratio (4) simulated time in seconds at which the decoding event occurred (5) the ID of the decoding node (starting with 1) (6) the layer that was newly decoded (starting with 0) (7) a unique ID of the generation (8) the decoding delay in seconds The processed information contains one aggregated results line per set of simulations. It contains named columns and gives the average decoding delay for each layer. The last column gives 95% confidence intervals for the decoding delay.