cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.v5k986
title: Occurrence Download

description: A dataset containing 226718 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amara montivaga Sturm, 1825, Drymus ryeii Douglas & Scott, 1865, Peritrechus nubilus (Fallen, 1807), Amara equestris (Duftschmid, 1812), Ophonus schaubergerianus (Puel, 1937), Peritrechus geniculatus (Hahn, 1833), Megalonotus emarginatus (Rey, 1888), Amara eurynota (Panzer, 1796), Ophonus stictus Stephens, 1828, Trachyphloeus aristatus (Gyllenhal, 1827), Mordellistena falsoparvula Ermisch, 1956, Helophorus griseus (Herbst, 1793), Anthicus antherinus (Linnaeus, 1760), Diplapion confluens (Kirby, 1808), Coryssomerus capucinus Schoenh., 1843, Amara quenseli (Schönherr, 1806), Mordellistena parvula (Gyllenhal, 1827), Macrosteles laevis (Ribaut, 1927), Athous bicolor (Goeze, 1777), Sphragisticus nebulosus (Fallen, 1807), Rhyparochromus vulgaris (Schilling, 1829), Holcostethus strictus (Fabricius, 1803), Eusomus ovulum Germar, 1823, Trichordestra legitima Grote, 1864, Hemicrepidius niger (Linnaeus, 1758), Metopoplax origani (Kolenati, 1845), Hemicrepidius hirtus (Herbst, 1784), Ophonus ardosiacus (Lutshnik, 1922), Ophonus rufibarbis (Fabricius, 1792), Ophonus laticollis Mannerheim, 1825, Harpalus rubripes (Duftschmid, 1812), Diachromus germanus (Linnaeus, 1758), Harpalus latus (Linnaeus, 1758), Orthodes cynica Guenée, 1852, Cryptocala acadiensis Bethune-Baker, 1870, Homorthodes furfurata Grote, 1875, Gillmeria pallidactyla (Haworth, 1811), Carpocoris purpureipennis (DeGeer, 1773), Cordylepherus viridis (Fabricius, 1787), Eupithecia miserulata Grote, 1863, Xestia smithii Snellen, 1896, Lacinipolia olivacea Morrison, 1874, Polites origenes (Fabricius, 1793), Orthocephalus saltator (Hahn, 1835), Stygnocoris rusticus (Fallen, 1807), Megalocoleus molliculus (Fallen, 1807), Ligyrocoris sylvestris (Linnaeus, 1758), Orthocephalus coriaceus (Fabricius, 1777), Sphaerophoria contigua (Macquart, 1847), Baris lepidii Porta, 1932)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 226718 records from 1356 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011765-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/wgnkf-8zg77
title: B. subtilis minicell lysate

description: B subtilis strain DK 720 minicell lysate
description: <strong>Tilt Series Date:</strong> 2013-09-05</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> autoPatch</p>
<strong>Collaborators and Roles:</strong> Dan Kearns</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Minicell isolation and Lysozyme lysis</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-05-10/rawdata/</p>Bacilluslysemini0012.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-05-10/rawdata/Bacilluslysemini0012.mrc"
        > <i class="download icon"></i> Download </a></p>

        Bacilluslysemini0012.rec,  Reconstruction (Pixel Size 1.28 nm), 1.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-05-10/3dimage_30419/Bacilluslysemini0012.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/y62j5-6vn26
title: R. sphaeroides Cryosections

description: R. sphaeroides Cryosections strain 593
description: <strong>Tilt Series Date:</strong> 2013-10-23</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 44000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Judith Armitage</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-66/rawdata/</p>rhodosectionsatlas20013.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-66/rawdata/rhodosectionsatlas20013.mrc"
        > <i class="download icon"></i> Download </a></p>

        rhodosectionsatlas20013_full.rec,  Reconstruction (Pixel Size 0.64 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-66/3dimage_33167/rhodosectionsatlas20013_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mz69k-jfs75
title: Agrobacterium tumefaciens

description: Agrobacterium_VirB8-GFP_deltaVirB8
description: <strong>Tilt Series Date:</strong> 2013-06-02</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain from Pat Zambryski</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-02-28/rawdata/</p>agro_virB8_delta0010.mrc,  Tilt Series (Pixel Size 0.48 nm), 2.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-02-28/rawdata/agro_virB8_delta0010.mrc"
        > <i class="download icon"></i> Download </a></p>

        10_full.rec,  Reconstruction (Pixel Size 1.92 nm), 662.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-02-28/3dimage_56687/10_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/q2qmf-n8e42
title: Simkania negevensis Cryosections

description: Cryosections of infected amoeba cells
description: <strong>Tilt Series Date:</strong> 2012-03-30</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Simkania negevensis</p>
<strong>Strain:</strong> Z</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Matthias Horn</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cryosections</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2012-03-30-13/rawdata/</p>03302012_cs_s4_x.st,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2012-03-30-13/rawdata/03302012_cs_s4_x.st"
        > <i class="download icon"></i> Download </a></p>

        03302012_cs_s4_x.rec,  Reconstruction (Pixel Size 1.89 nm), 418.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2012-03-30-13/3dimage_31622/03302012_cs_s4_x.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/641zm-ga950
title: R9deltaEnv MOLT

description: fixed, wt, molt, R9
description: <strong>Tilt Series Date:</strong> 2014-08-25</p>
<strong>Data Taken By:</strong> Luiza Mendonca</p>
<strong>Species / Specimen:</strong> HIV and deltaNef</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> fixed w/ 1% formaldehyde</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-08-25-4/rawdata/</p>L029_grid4_0003.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-08-25-4/rawdata/L029_grid4_0003.mrc"
        > <i class="download icon"></i> Download </a></p>

        L029_grid4_0003_full.rec,  Reconstruction (Pixel Size 1.56 nm), 430.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-08-25-4/3dimage_46059/L029_grid4_0003_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/s8mx4-r2715
title: drp1

description: purified drp1
description: <strong>Tilt Series Date:</strong> 2013-09-07</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Drp1</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> David Chan</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-09-07-1/rawdata/</p>drp10001.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-09-07-1/rawdata/drp10001.mrc"
        > <i class="download icon"></i> Download </a></p>

        drp10001_full.rec,  Reconstruction (Pixel Size 1.56 nm), 89.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-09-07-1/3dimage_30473/drp10001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/cezgq-06x70
title: Azospirillum WT

description: Azospirillum brasilense strain SP7 (WT)
description: <strong>Tilt Series Date:</strong> 2014-05-06</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Azospirillum brasilense</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Gladys Alexandre</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-05-06-1/3dimage_42192/</p>AzoWTMay0001_part121_59.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-05-06-1/3dimage_42192/AzoWTMay0001_part121_59.rec"
        > <i class="download icon"></i> Download </a></p>

        AzoWTMay0001.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-05-06-1/rawdata/AzoWTMay0001.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.kejhsg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trochalopteron virgatum",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044989-250811113504898/datasets/export for details.
DOI: 10.22002/2yb8t-hj052
title: E.coli   "strain 2619" EEEE

description: E.coli   "strain 2619" EEEE tsr receptor methylation site mutant EEEE CheA off state (CCWA)
description: <strong>Tilt Series Date:</strong> 2012-04-02</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> John S. Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in TB medium at 30 degrees, 1 hour lysed with Penicillin</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-04-02-1/rawdata/</p>UU2619_manual1.mrc,  Tilt Series (Pixel Size 0.644 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-04-02-1/rawdata/UU2619_manual1.mrc"
        > <i class="download icon"></i> Download </a></p>

        UU2619_manual1_full.rec,  Reconstruction (Pixel Size 1.288 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-04-02-1/3dimage_18047/UU2619_manual1_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/3nkkz-yjn91
title: LD 4Q

description: low density TarCF-4Q on vesicles
description: <strong>Tilt Series Date:</strong> 2014-02-20</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli in vitro</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lynmarie Thompson</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-20-35/rawdata/</p>LD4Qmanualblot0035.mrc,  Tilt Series (Pixel Size 0.35 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-20-35/rawdata/LD4Qmanualblot0035.mrc"
        > <i class="download icon"></i> Download </a></p>

        LD4Qmanualblot0035_full.rec,  Reconstruction (Pixel Size 1.4 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-20-35/3dimage_39220/LD4Qmanualblot0035_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/cvxpn-rbn31
title: pNL_Huvecs_PI

description: Whole cells were grown on Au finder grids and infected with pNLGFP-VSVG. Sample frozen 24h post infection
description: <strong>Tilt Series Date:</strong> 2013-12-02</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HUVECs</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSFTomo</p>
<strong>Collaborators and Roles:</strong> pNLGFP obtained from Irvin Chen UCLA</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-12-02-13/rawdata/</p>13dec02_C177-2_pNL_Huvecs_PI_AT1BT1_0007.mrc,  Tilt Series (Pixel Size 0.49 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-12-02-13/rawdata/13dec02_C177-2_pNL_Huvecs_PI_AT1BT1_0007.mrc"
        > <i class="download icon"></i> Download </a></p>

        13dec02_C177-2_pNL_Huvecs_PI_AT1BT1_0007_part121_14.rec,  Reconstruction (Pixel Size 1.96 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-12-02-13/3dimage_35629/13dec02_C177-2_pNL_Huvecs_PI_AT1BT1_0007_part121_14.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/dkae0-xxj36
title: Rhodobacter sphaeroides cryosect

description: Rhodobacter sphaeroides JPA 543 with components of the cytoplmasmic array overexpressed
description: <strong>Tilt Series Date:</strong> 2013-09-13</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 41000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Judy Armitage, sectioned by Mark Ladinsky</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-13-39/rawdata/</p>Rhodobactercryosectionssept0055.mrc,  Tilt Series (Pixel Size 0.26 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-13-39/rawdata/Rhodobactercryosectionssept0055.mrc"
        > <i class="download icon"></i> Download </a></p>

        Rhodobactercryosectionssept0055_part61_16.rec,  Reconstruction (Pixel Size 0.52 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-13-39/3dimage_31136/Rhodobactercryosectionssept0055_part61_16.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/y1gmv-f1530
title: Sulfolobus solfactaricus+c92

description: Sulfolobus solfactaricus PH1-16 cells, transfected with C92 pyramid protein. 24 H. Post transfection.
description: <strong>Tilt Series Date:</strong> 2014-01-06</p>
<strong>Data Taken By:</strong> Rasika Ramdasi</p>
<strong>Species / Specimen:</strong> Sulfolobus solfataricus </p>
<strong>Strain:</strong> Ph1-16</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 1.0°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> With Jamie Snyder.</p>
<strong>Sample Preparation:</strong> With Jamie Synder</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-06-12/rawdata/</p>ssop1c920006.mrc,  Tilt Series (Pixel Size 0.63 nm), 3.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-06-12/rawdata/ssop1c920006.mrc"
        > <i class="download icon"></i> Download </a></p>

        ssop1c920006_part111_3.rec,  Reconstruction (Pixel Size 2.52 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-06-12/3dimage_37483/ssop1c920006_part111_3.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/f1h6n-h1j76
title: Agro VirB8-GFP

description: Agrobacterium cells Vir B8-GFP were induced for T pili in liquid and grown for 24h.
description: <strong>Tilt Series Date:</strong> 2013-05-08</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-61.0°, 61.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Pat Zambryski</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-05-08-21/rawdata/</p>VirB80021.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.4 GB  
        
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        VirB80021_part123_1.rec,  Reconstruction (Pixel Size 1.68 nm), 430.6 MB  
        
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