cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5908492.v1
title: MOESM2 of Network modules uncover mechanisms of skeletal muscle dysfunction in COPD patients

description: Additional file 2: Table S1. Number of differentially expressed genes in the different groups and conditions. Table S2. Previous measurements: List of variables measured. Table S3. Network modules: HotNet2 results. Table S4. Network modules: HotNet2 consensus. Table S5. Network modules: Functional characterization. Table S6. Network modules: Gene differential expression. Table S7. Previous measurements: Differentials. Table S8. Previous measurements: Association with network modules. Table S9. Comparison of microarray results with qPCR validation of external datasets.
DOI: 10.6084/m9.figshare.5908483
title: MOESM1 of Cerium oxide and barium sulfate nanoparticle inhalation affects gene expression in alveolar epithelial cells type II

description: Additional file 1: Table S1. Fold regulation of regulated genes. List of fold regulation and standard deviation values of the regulated genes listed in TablesÂ 2 and 3 of the manuscript. Values are shown for every dose group and time point.
DOI: 10.6084/m9.figshare.5908483.v1
title: MOESM1 of Cerium oxide and barium sulfate nanoparticle inhalation affects gene expression in alveolar epithelial cells type II

description: Additional file 1: Table S1. Fold regulation of regulated genes. List of fold regulation and standard deviation values of the regulated genes listed in TablesÂ 2 and 3 of the manuscript. Values are shown for every dose group and time point.
DOI: 10.6084/m9.figshare.5908399
title: Additional file 1: of Elucidation of cross-species proteomic effects in human and hominin bone proteome identification through a bioinformatics experiment

description: FASTA file containing possible contaminant proteins appended to each reference proteome. This list derives from the common Repository of Adventitious Proteins and contaminant proteins listed in [43]. (FASTA 39 kb)
DOI: 10.6084/m9.figshare.5908399.v1
title: Additional file 1: of Elucidation of cross-species proteomic effects in human and hominin bone proteome identification through a bioinformatics experiment

description: FASTA file containing possible contaminant proteins appended to each reference proteome. This list derives from the common Repository of Adventitious Proteins and contaminant proteins listed in [43]. (FASTA 39 kb)
DOI: 10.6084/m9.figshare.5908390
title: MOESM1 of Risk factors associated with precancerous cervical lesion among women screened at Marie Stops Ethiopia, Adama town, Ethiopia 2017: a case control study

description: Additional file 1. Risk factors of precancerous cervical lesion file.
DOI: 10.6084/m9.figshare.5908390.v1
title: MOESM1 of Risk factors associated with precancerous cervical lesion among women screened at Marie Stops Ethiopia, Adama town, Ethiopia 2017: a case control study

description: Additional file 1. Risk factors of precancerous cervical lesion file.
DOI: 10.6084/m9.figshare.5908318
title: MOESM2 of Using non-exceedance probabilities of policy-relevant malaria prevalence thresholds to identify areas of low transmission in Somalia

description: Additional file 2. Model outputs per region.
DOI: 10.6084/m9.figshare.5908318.v1
title: MOESM2 of Using non-exceedance probabilities of policy-relevant malaria prevalence thresholds to identify areas of low transmission in Somalia

description: Additional file 2. Model outputs per region.
DOI: 10.6084/m9.figshare.5908312
title: MOESM1 of The determinants of crop yields in Uganda: what is the role of climatic and non-climatic factors?

description: Additional file 1. Table S1. Summary of 31 food and cash crops used in this study and all other data in excel
DOI: 10.6084/m9.figshare.5908312.v1
title: MOESM1 of The determinants of crop yields in Uganda: what is the role of climatic and non-climatic factors?

description: Additional file 1. Table S1. Summary of 31 food and cash crops used in this study and all other data in excel
DOI: 10.5281/zenodo.4008419
title: Non-equilibrium protein folding

description: MD trajectories of all-atom MD simulations for peptides P1-P5.
DOI: 10.6084/m9.figshare.5907970
title: Complete Band Gaps in Nano-Piezoelectric Phononic Crystals

description: We study the band structure of elastic waves propagating in a nano-piezoelectric phononic crystal consisting of a polymeric matrix reinforced by BaTiO3 inclusions in square, rectangular, triangular, honeycomb and Kagomé lattices. We also investigate the influence of inclusion cross section geometry - circular, hollow circular, square and rotated square with a 45º angle of rotation with respect to x and y axes. Plane wave expansion method is used to solve the governing equations of motion of a piezoelectric solid based on classical elasticity theory, ignoring nanoscopic size effects, considering two-dimensional periodicity and wave propagation in the xy plane. Complete band gaps between XY and Z modes are observed for all inclusions and the best performance is for circular inclusion in a triangular lattice. Piezoelectricity influences significantly the band gaps for hollow circular inclusion in lower frequencies. We suggest that nano-piezoelectric phononic crystals are feasible for elastic vibration management in GHz.
DOI: 10.6084/m9.figshare.5907970.v1
title: Complete Band Gaps in Nano-Piezoelectric Phononic Crystals

description: We study the band structure of elastic waves propagating in a nano-piezoelectric phononic crystal consisting of a polymeric matrix reinforced by BaTiO3 inclusions in square, rectangular, triangular, honeycomb and Kagomé lattices. We also investigate the influence of inclusion cross section geometry - circular, hollow circular, square and rotated square with a 45º angle of rotation with respect to x and y axes. Plane wave expansion method is used to solve the governing equations of motion of a piezoelectric solid based on classical elasticity theory, ignoring nanoscopic size effects, considering two-dimensional periodicity and wave propagation in the xy plane. Complete band gaps between XY and Z modes are observed for all inclusions and the best performance is for circular inclusion in a triangular lattice. Piezoelectricity influences significantly the band gaps for hollow circular inclusion in lower frequencies. We suggest that nano-piezoelectric phononic crystals are feasible for elastic vibration management in GHz.
DOI: 10.6084/m9.figshare.5907967
title: Effects of Local Heat Input Conditions on the Thermophysical Properties of Super Duplex Stainless Steels (SDSS)

description: The properties of the super duplex stainless steels (SDSS) are strongly affected by the thermal history imposed by welding procedures. The controlled dual phase microstructure (ferrite and austenite) guarantee excellent mechanical properties such as mechanical strength and corrosion resistance, in addition to small thermal expansion coefficient and high thermal conductivity. In this paper, we newly proposed a model able to predict the thermal history of the welding pieces coupled with local mechanical properties developed during welding procedure that combine the effects of temperature and phase changes during welding. We applied inverse method to fit the thermophysical parameters based on measured data. The model was verified by comparing measured and predicted temperature profiles using thermocouples located within the heat affected zone. Thus, an inverse method was implemented to obtain the parameters fitting for the grain growth evolution compatible with the final microstructure and grain size measured using SEM images and stereological techniques. We demonstrated that very small amount of non-equilibrium deleterious phases and nanosized precipitated are expected during the welding procedures depending upon the local conditions of temperature, compositions and alloying dilution evolutions.
DOI: 10.6084/m9.figshare.5907967.v1
title: Effects of Local Heat Input Conditions on the Thermophysical Properties of Super Duplex Stainless Steels (SDSS)

description: The properties of the super duplex stainless steels (SDSS) are strongly affected by the thermal history imposed by welding procedures. The controlled dual phase microstructure (ferrite and austenite) guarantee excellent mechanical properties such as mechanical strength and corrosion resistance, in addition to small thermal expansion coefficient and high thermal conductivity. In this paper, we newly proposed a model able to predict the thermal history of the welding pieces coupled with local mechanical properties developed during welding procedure that combine the effects of temperature and phase changes during welding. We applied inverse method to fit the thermophysical parameters based on measured data. The model was verified by comparing measured and predicted temperature profiles using thermocouples located within the heat affected zone. Thus, an inverse method was implemented to obtain the parameters fitting for the grain growth evolution compatible with the final microstructure and grain size measured using SEM images and stereological techniques. We demonstrated that very small amount of non-equilibrium deleterious phases and nanosized precipitated are expected during the welding procedures depending upon the local conditions of temperature, compositions and alloying dilution evolutions.
DOI: 10.6084/m9.figshare.5907964
title: Analysis of the accuracy of different laboratory methods for the diagnosis of intestinal parasites from stray and domiciled cats (Felis catus domesticus) in Goiânia, Goiás, Brazil

description: Abstract Cats are carriers of zoonotic agents to humans, including intestinal parasites. The purpose of this study was to analyze the accuracy of different laboratory methods for the diagnosis of intestinal parasites. Fecal samples were processed by the Willis, Sheather, Faust and Hoffman-Janer-Pons-Lutz (HJPL) methods. Accuracy analysis was performed determining the sensitivity, specificity, positive and negative predictive value and Kappa. A total of 149 fecal samples were collected, 65 from stray cats and 84 from domiciled cats. The prevalence of intestinal parasites in stray cats was 60% while in domiciled cats it was 17%. In the analysis of accuracy, the techniques that showed the greatest accuracy for Ancylostomids were Willis and Faust, for Cystoisospora spp. Sheather with Faust or HPJL, and Toxoplasma gondii/Hammondia hammondi the association between Willis and Faust. Therefore, for a reliable evaluation of the prevalence of intestinal parasites, at least two different techniques should be used in parasitological exams of feces.
DOI: 10.6084/m9.figshare.5907964.v1
title: Analysis of the accuracy of different laboratory methods for the diagnosis of intestinal parasites from stray and domiciled cats (Felis catus domesticus) in Goiânia, Goiás, Brazil

description: Abstract Cats are carriers of zoonotic agents to humans, including intestinal parasites. The purpose of this study was to analyze the accuracy of different laboratory methods for the diagnosis of intestinal parasites. Fecal samples were processed by the Willis, Sheather, Faust and Hoffman-Janer-Pons-Lutz (HJPL) methods. Accuracy analysis was performed determining the sensitivity, specificity, positive and negative predictive value and Kappa. A total of 149 fecal samples were collected, 65 from stray cats and 84 from domiciled cats. The prevalence of intestinal parasites in stray cats was 60% while in domiciled cats it was 17%. In the analysis of accuracy, the techniques that showed the greatest accuracy for Ancylostomids were Willis and Faust, for Cystoisospora spp. Sheather with Faust or HPJL, and Toxoplasma gondii/Hammondia hammondi the association between Willis and Faust. Therefore, for a reliable evaluation of the prevalence of intestinal parasites, at least two different techniques should be used in parasitological exams of feces.
DOI: 10.6084/m9.figshare.5907958
title: TECHNOLOGICAL PROPERTIES OF PLYWOOD BONDED WITH PHENOL-FORMALDEHYDE RESOL RESIN SYNTHESIZED WITH BIO-OIL

description: ABSTRACT In this study, it was aimed to use of bio-oil as an alternative to petroleum-based phenol in the production of phenol-formaldehyde (PF) resin used for making exterior plywood.Bio-oil obtained from pine wood sawdust using a vacuum pyrolysis reactor at 500 °C. The PF resol resins were produced by substituting up to 20 wt% of phenol with bio-oil by modifying the chemical synthesis process. FT-IRanalysis was performed to characterizethe organic functional groups in the bio-oil modified PF resins. In comparison to the commercial and lab-made PF resins, the bio-oil modified PF resins were found to have larger average molecular weights, higher polydispersity indices, and shorter gel times. Six different types of plywood panels were produced from the experimental PF resins which were commercial PF resin, lab-made PF resin, and PF resins modified with bio oil of 5, 10, 15 or 20 wt% contents, respectively. Plywood specimens produced with the PF resin modified with bio-oil up to 20 wt% had better tensile shear strength (wet condition), modulus of rupture, and modulus of elasticity in bending as compared to the commercial and lab-made PF resins.
DOI: 10.6084/m9.figshare.5907958.v1
title: TECHNOLOGICAL PROPERTIES OF PLYWOOD BONDED WITH PHENOL-FORMALDEHYDE RESOL RESIN SYNTHESIZED WITH BIO-OIL

description: ABSTRACT In this study, it was aimed to use of bio-oil as an alternative to petroleum-based phenol in the production of phenol-formaldehyde (PF) resin used for making exterior plywood.Bio-oil obtained from pine wood sawdust using a vacuum pyrolysis reactor at 500 °C. The PF resol resins were produced by substituting up to 20 wt% of phenol with bio-oil by modifying the chemical synthesis process. FT-IRanalysis was performed to characterizethe organic functional groups in the bio-oil modified PF resins. In comparison to the commercial and lab-made PF resins, the bio-oil modified PF resins were found to have larger average molecular weights, higher polydispersity indices, and shorter gel times. Six different types of plywood panels were produced from the experimental PF resins which were commercial PF resin, lab-made PF resin, and PF resins modified with bio oil of 5, 10, 15 or 20 wt% contents, respectively. Plywood specimens produced with the PF resin modified with bio-oil up to 20 wt% had better tensile shear strength (wet condition), modulus of rupture, and modulus of elasticity in bending as compared to the commercial and lab-made PF resins.
DOI: 10.6084/m9.figshare.5907955
title: Preparation of Tetraethylenepentamine Modified Magnetic Graphene Oxide for Adsorption of Dyes from Aqueous Solution

description: In this study, tetraethylenepentamine modified magnetic graphene oxide nanomaterial (TMGO) was prepared and characterized by transmission electron microscopy (TEM), Fourier transform infrared spectroscopy (FTIR), Raman spectroscopy, thermogravimetric analysis (TGA), X-ray photoelectron spectroscopy (XPS) and vibration sample magnetometer (VSM). All the characterizations proved that the modification and preparation of TMGO were successful. The TMGO nanomaterial was used in the adsorption of Acid Red 18 (AR) in aqueous solution. The parameters like pH of solution, adsorption kinetics and isotherms were all investigated. The results indicated that the TMGO nanomaterial had satisfied adsorption ability and the maximum adsorption capacity was 524.2 mg g -1 at 45 °C and pH 6. The adsorption capacity remained at 91.8% of the initial value after five cycles. The adsorption process with AR was found through fitting the pseudo-second-order kinetics equations and the Freundlich adsorption model. The experimental results demonstrated that the TMGO nanomaterial could be rapidly extracted from the medium and had a good adsorption ability to remove dyes in wastewater.
DOI: 10.6084/m9.figshare.5907955.v1
title: Preparation of Tetraethylenepentamine Modified Magnetic Graphene Oxide for Adsorption of Dyes from Aqueous Solution

description: In this study, tetraethylenepentamine modified magnetic graphene oxide nanomaterial (TMGO) was prepared and characterized by transmission electron microscopy (TEM), Fourier transform infrared spectroscopy (FTIR), Raman spectroscopy, thermogravimetric analysis (TGA), X-ray photoelectron spectroscopy (XPS) and vibration sample magnetometer (VSM). All the characterizations proved that the modification and preparation of TMGO were successful. The TMGO nanomaterial was used in the adsorption of Acid Red 18 (AR) in aqueous solution. The parameters like pH of solution, adsorption kinetics and isotherms were all investigated. The results indicated that the TMGO nanomaterial had satisfied adsorption ability and the maximum adsorption capacity was 524.2 mg g -1 at 45 °C and pH 6. The adsorption capacity remained at 91.8% of the initial value after five cycles. The adsorption process with AR was found through fitting the pseudo-second-order kinetics equations and the Freundlich adsorption model. The experimental results demonstrated that the TMGO nanomaterial could be rapidly extracted from the medium and had a good adsorption ability to remove dyes in wastewater.
DOI: 10.6084/m9.figshare.5907952
title: A Novel Electrochemical Aptamer Biosensor Based on DNAzyme Decorated Au@Ag Core-Shell Nanoparticles for Hg2+ Determination

description: As a kind of important water pollutant, heavy metal ions have a detrimental effect on the health of human. In this study, Au@Ag core-shell nanoparticles were synthesized by simple reduction of Ag + around Au nanoparticles and functionalized by DNAzyme. Based on thymine-Hg2+-thymine binding mode, a sensitive aptamer biosensor was constructed by utilizing functionalized Au@Ag core-shell nanoparticles as labels, and the sensitivity was enhanced by DNAzyme due to the catalysis toward H2O2. Under optimal conditions, square wave voltammetry was carried out to measure the current derived from Au@Ag nanoparticles labels. The current response of biosensor increased with the increasing of Hg2+ concentration, which presented linear relation in the range of 0.002-20 μg L -1 with limit of detection of 0.006 μg L -1. Meanwhile, the electrochemical biosensor showed superior reversibility, stability, repeatability, and selectivity.
DOI: 10.6084/m9.figshare.5907952.v1
title: A Novel Electrochemical Aptamer Biosensor Based on DNAzyme Decorated Au@Ag Core-Shell Nanoparticles for Hg2+ Determination

description: As a kind of important water pollutant, heavy metal ions have a detrimental effect on the health of human. In this study, Au@Ag core-shell nanoparticles were synthesized by simple reduction of Ag + around Au nanoparticles and functionalized by DNAzyme. Based on thymine-Hg2+-thymine binding mode, a sensitive aptamer biosensor was constructed by utilizing functionalized Au@Ag core-shell nanoparticles as labels, and the sensitivity was enhanced by DNAzyme due to the catalysis toward H2O2. Under optimal conditions, square wave voltammetry was carried out to measure the current derived from Au@Ag nanoparticles labels. The current response of biosensor increased with the increasing of Hg2+ concentration, which presented linear relation in the range of 0.002-20 μg L -1 with limit of detection of 0.006 μg L -1. Meanwhile, the electrochemical biosensor showed superior reversibility, stability, repeatability, and selectivity.
DOI: 10.6084/m9.figshare.5907949
title: Supplementation with microencapsulated lemongrass essential oil improves protein deposition and carcass yield in silver catfish (Rhamdia quelen)

description: ABSTRACT. The aim of this study was to investigate the effect of dietary supplementation with Cymbopogon flexuosus essential oil (EO) on productive performance, metabolic parameters and body and fillet composition of adult silver catfish, Rhamdia quelen. Total length, condition factor, weight gain, specific growth rate, hepatosomatic index, visceral fat content and fillet composition were not affected by EO supplementation. Plasma total protein, globulin and triglycerides were reduced by EO supplementation. Supplementation with 1 mL EO kg-1 diet increased carcass yield and protein deposition in the carcass, while reducing gonadosomatic index and fat deposition in the carcass when compared to control group. In addition, 1 mL EO kg-1 diet also improved feed intake when compared to 3 mL EO kg-1 diet. Our results suggest that EO up to 1 mL kg-1 diet can be used in fish feed to improve protein deposition and carcass yield of silver catfish.
DOI: 10.6084/m9.figshare.5907949.v1
title: Supplementation with microencapsulated lemongrass essential oil improves protein deposition and carcass yield in silver catfish (Rhamdia quelen)

description: ABSTRACT. The aim of this study was to investigate the effect of dietary supplementation with Cymbopogon flexuosus essential oil (EO) on productive performance, metabolic parameters and body and fillet composition of adult silver catfish, Rhamdia quelen. Total length, condition factor, weight gain, specific growth rate, hepatosomatic index, visceral fat content and fillet composition were not affected by EO supplementation. Plasma total protein, globulin and triglycerides were reduced by EO supplementation. Supplementation with 1 mL EO kg-1 diet increased carcass yield and protein deposition in the carcass, while reducing gonadosomatic index and fat deposition in the carcass when compared to control group. In addition, 1 mL EO kg-1 diet also improved feed intake when compared to 3 mL EO kg-1 diet. Our results suggest that EO up to 1 mL kg-1 diet can be used in fish feed to improve protein deposition and carcass yield of silver catfish.
DOI: 10.6084/m9.figshare.5907946
title: Water potential in peach branches as a function of soil water storage and evaporative demand of the atmosphere

description: Abstract The use of water potential indicators in the plant has been adopted in irrigation management, in recent years, since it is accepted that the plant is the best indicator of its own water status. The objective of this study was to verify the relationship between water potential in peach tree branches and the evaporative demand of the atmosphere and the water availability in two textural classes of an Aquertic Hapludalf soil, aiming to adopt irrigation management strategies based on the water potential in the plant. Research was carried out in a commercial peach orchard, cv. Esmeralda, in the municipality of Morro Redondo-Rio Grande do Sul state, Brazil. Four peach tree rows were evaluated, being two irrigated and two non irrigated. The irrigation management was based on the replacement of the potential crop evapotranspiration. It was concluded that the water potential in the peach tree branch is positively related with the evaporative demand of the atmosphere and negatively related with soil water storage. Future studies should adopt irrigation management strategies for peach trees based on the water potential mainly for the irrigation management of post-harvest peach trees.