cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/p9ikd7ne
title: Geologic map of Ophir and central Candor Chasmata (MTM -05072) of Mars

description: The geologic map of Ophir and central Candor Chasmata is one of a series of 1:500,000 scale maps prepared for areas on Mars that are of particular scientific interest and may serve as potential future landing sites. This map is also part of a set that includes east Candor Chasma, west Candor Chasma, and Melas Chasma. The geologic interpretations are based dominantly on medium- and high-resolution Viking images, many of them stereoscopic, and supplemented by lower resolution apoapsis and other color images. A strip of very high resolution stereoscopic images (~20 m/pixel) crosses the central part of the quadrangle from northwest to southeast and served to clarify detailed relations not obvious on other images. A topographic map with contour intervals of 200 m was also used, as were multidirectional oblique images derived from merged image mosaics and topography (see fig. 1) (Bertolini and McEwen, 1990). Geologic relations and interpretations are based on the entire central Valles Marineris map set. The map area is included in the Valles Marineris map of Witbeck and others (1991), but units were defined independently. Age assignments, however, were integrated with those by Witbeck and others and Scott and Tanaka (1986).
DOI: 10.5281/zenodo.10253284
title: IMU and marker-based optical motion capture from a humanoid robot

description: The motion capture contains walking trials from the lower body of the humanoid robot Reem-C from Pal Robotics (Barcelona, Spain). Seven IMUs were attached on the foot, lower leg, upper leg and pelvis segments. IMU data was collected at 100 Hz. Moreover, the robot motion was captured with a marker-based optical system (Qualisys AB, Göteborg, Sweden) at 150 Hz. The focus of the dataset was mainly walking. There are three trials, each with a length of about 6.5 minutes.The dataset contains the definition of the skeleton (segment lengths and coordinate locations), the actual IMU readings and the pose or kinematics from the optical system.
description: Code samples, a visualizer and further useful information is provided under the following git repository: https://github.com/BTaetz/Visualizer-SkeletalMotionHDF5
DOI: 10.5281/zenodo.10253283
title: IMU and marker-based optical motion capture from a humanoid robot

description: The motion capture contains walking trials from the lower body of the humanoid robot Reem-C from Pal Robotics (Barcelona, Spain). Seven IMUs were attached on the foot, lower leg, upper leg and pelvis segments. IMU data was collected at 100 Hz. Moreover, the robot motion was captured with a marker-based optical system (Qualisys AB, Göteborg, Sweden) at 150 Hz. The focus of the dataset was mainly walking. There are three trials, each with a length of about 6.5 minutes.The dataset contains the definition of the skeleton (segment lengths and coordinate locations), the actual IMU readings and the pose or kinematics from the optical system.
description: Code samples, a visualizer and further useful information is provided under the following git repository: https://github.com/BTaetz/Visualizer-SkeletalMotionHDF5
DOI: 10.5281/zenodo.10257846
title: Digital competence profiles of first year, pre-service teachers. Analysis in the Catalan university system. RAWDATA

description: Dataset for the ARMIF research project 2018-19
DOI: 10.5281/zenodo.10257847
title: Digital competence profiles of first year, pre-service teachers. Analysis in the Catalan university system. RAWDATA

description: Dataset for the ARMIF research project 2018-19
DOI: 10.5281/zenodo.10254091
title: SemMed VER43 Entity Dataset

description: A version of the official SemMedDB data used for a project under the supervision of Dr. Fitzroy Nembhard, Dept. of Computer Engineering and Sciences, Florida Institute of Technology.
 
Due to size constraints, the complete file was split roughly every 500MB (+/- 25 MB). In order to ensure data integrity, the files should be concatenated in the order based on name. (partaa -> partab ->... -> partda) .
DOI: 10.5281/zenodo.10254092
title: SemMed VER43 Entity Dataset

description: A version of the official SemMedDB data used for a project under the supervision of Dr. Fitzroy Nembhard, Dept. of Computer Engineering and Sciences, Florida Institute of Technology.
 
Due to size constraints, the complete file was split roughly every 500MB (+/- 25 MB). In order to ensure data integrity, the files should be concatenated in the order based on name. (partaa -> partab ->... -> partda) .
DOI: 10.5281/zenodo.10253110
title: TUK-6-minute-walking dataset

description: This dataset provides synchronized lower body inertial measurement unit (IMU) and optical reference data for a group of 25 young and healthy persons starting in a static neutral pose (n-pose) and performing a six-minute walk test during two points in time (rest and retest). The dataset can be used for evaluating the validity and reliability of IMU based kinematics estimation approaches. 
description: Code samples, a visualizer and further useful information is provided under the following git repository: https://github.com/BTaetz/Visualizer-SkeletalMotionHDF5
DOI: 10.5281/zenodo.10253111
title: TUK-6-minute-walking dataset

description: This dataset provides synchronized lower body inertial measurement unit (IMU) and optical reference data for a group of 25 young and healthy persons starting in a static neutral pose (n-pose) and performing a six-minute walk test during two points in time (rest and retest). The dataset can be used for evaluating the validity and reliability of IMU based kinematics estimation approaches. 
description: Code samples, a visualizer and further useful information is provided under the following git repository: https://github.com/BTaetz/Visualizer-SkeletalMotionHDF5
DOI: 10.5066/p9emuox0
title: (LAC-78) Geologic map of the Theophilus quadrangle of the moon

description: The surface of the moon is heterogeneous. The differences from area to area of characteristic topographic forms and of physical properties such as albedo (reflectivity under full-Moon illumination) indicate that the materials underlying the surface vary from one area to another and that different processes have operated in the development of the surface. In lunar geologic mapping, areas are delineated that, as far as possible, are analogous in terrestrial mapping to the areas of outcrop of stratigraphic units - bodies of rock whose limited range of lithology and age and relatively simple geometric form indicate formation under a common set of conditions. For the moon, at the present time, physical properties that are believed dependent on lithology rather than lithology itself must characterize units. Age relations between units can be established from their boundary relations if certain simple assumptions are made about processes on the Moon - i'or example, that most exposed units were deposited at the surface. A sequence of time-stratigraphic units based on events that affected much of the surface of the Moon has been established in the vicinity of Mare Imbrium, and may serve as a general framework for lunar stratigraphy. The systems and salient events of each are as follows (Shoemaker, 1962; Shoemaker and Hackman, 1962).
DOI: 10.5281/zenodo.10257739
title: Serine-129 phosphorylation of a-synuclein is an activity-dependent trigger for physiologic protein-protein interactions and synaptic function

description: Phosphorylation of a-synuclein at the Serine-129 site (a-syn Ser129P) is an established pathologic hallmark of synucleinopathies and a therapeutic target. In physiologic states, only a small fraction of a-syn is phosphorylated at this site, and most studies have focused on the pathologic roles of this post-translational modification. We found that unlike wild-type (WT) a-syn which is widely expressed throughout the brain, the overall pattern of a-syn Ser129P is restricted, suggesting intrinsic regulation. Surprisingly, preventing Ser129P blocked activity-dependent synaptic attenuation by a-syn – thought to reflect its normal function. Exploring mechanisms, we found that neuronal activity augments Ser129P, which is a trigger for protein-protein interactions that are necessary for mediating a-syn function at the synapse. AlphaFold2-driven modeling and membrane-binding simulations suggest a scenario where Ser129P induces conformational changes that facilitate interactions with binding partners. Our experiments offer a new conceptual platform for investigating the role of Ser129 in synucleinopathies, with implications for drug-development. 
description: Data associated with https://doi.org/10.1101/2022.12.22.521485
DOI: 10.5258/soton/d2176
title: Dataset: Angle-spliced SMF to hollow core fiber connection with optimized back-reflection and insertion loss

description: This dataset supports the manuscript submitted to Journal of Lightwave Technology: Cong Zhang, E. N. Fokoua, S. Fu, M. Ding, F. Poletti, D. J. Richardson, and R. Slavík "Angle-spliced SMF to hollow core fiber connection with optimized back-reflection and insertion loss". The dataset consists of an uploaded Archive (RAR) folder which includes 5 data files in Excel format.
DOI: 10.6084/m9.figshare.19932125
title: Chapter2_SuppFile_neanderthal_cres_tfbs_snps

description: Supplementary file containig the list of Neanderthal TFBS-disrupting SNPs and their putative associated target genes
DOI: 10.6084/m9.figshare.19932125.v2
title: Chapter2_SuppFile_neanderthal_cres_tfbs_snps

description: Supplementary file containig the list of Neanderthal TFBS-disrupting SNPs and their putative associated target genes
DOI: 10.6084/m9.figshare.19932125.v1
title: Chapter2_SuppFile_neanderthal_cres_tfbs_snps

description: Supplementary file containig the list of Neanderthal TFBS-disrupting SNPs and their putative associated target genes
DOI: 10.6084/m9.figshare.19932119
title: Chapter2_SuppFile_denisova_cres_tfbs_snps

description: File containing the list of Denisovan TFBS-disrupting variants and their putative associated target genes
DOI: 10.6084/m9.figshare.19932119.v2
title: Chapter2_SuppFile_denisova_cres_tfbs_snps

description: File containing the list of Denisovan TFBS-disrupting variants and their putative associated target genes
DOI: 10.6084/m9.figshare.19932119.v1
title: Chapter2_SuppFile_denisova_cres_tfbs_snps

description: File containing the list of Denisovan TFBS-disrupting variants and their putative associated target genes
DOI: 10.34636/dmportal/rwde5d/3uh20l
title: MetabolomicPM.tab

description: Metabolic profiling of grape berries infected with powdery mildew.
DOI: 10.34636/dmportal/rwde5d
title: Metabolic profiling of grape berries infected with powdery mildew.

description: This dataset contains the normalized responses of profiled volatile and polar metabolites from control and infected berries with powdery mildew.
DOI: 10.6084/m9.figshare.19932245.v1
title: In vitro selection of autochthonous bacterium with probiotic potential for the neotropical fish piauçu Megaleporinus microcephalus

description: ABSTRACT The study aimed to isolate, identify, and apply in vitro tests on bacteria with autochthonous probiotic potential isolated from fifteen healthy specimens of Megaleporinus macrocephalus. The strains were selected from the intestinal tract of fish and inoculated in the Petri plate containing Sharp Man Rogosa Agar (MRS) for (48 hours at 35ºC). They were isolated based on a test of catalase, Gram stain, tolerance to different gradients NaCl (1, 2 and 3%), pH (4, 5, 6, 8 and 9) values and bile salts (2.5 and 5%), in addition to the inhibition zone against pathogens. Of the 42 strains isolated, ST1 and ST9 had higher values (p&lt;0.05) for total viable cells (31.80±0.07 and 32.51±0.05 CFU/mL × 108) respectively. In the resistance tests, strains ST1 and ST9 presented the best results, with emphasis on ST9 in the gradients of pH, high values of bile salts and larger inhibition zones against Aeromonas hydrophila and Aeromonas jandaei. The strains with the best results in the tests, ST1 and ST9, were identified by the MALDI-TOF-MS method as Enterococcus faecium. Thus, the isolated E. faecium bacteria, may be recommended as for probiotic use in farming the M. macrocephalus.
DOI: 10.6084/m9.figshare.19932245
title: In vitro selection of autochthonous bacterium with probiotic potential for the neotropical fish piauçu Megaleporinus microcephalus

description: ABSTRACT The study aimed to isolate, identify, and apply in vitro tests on bacteria with autochthonous probiotic potential isolated from fifteen healthy specimens of Megaleporinus macrocephalus. The strains were selected from the intestinal tract of fish and inoculated in the Petri plate containing Sharp Man Rogosa Agar (MRS) for (48 hours at 35ºC). They were isolated based on a test of catalase, Gram stain, tolerance to different gradients NaCl (1, 2 and 3%), pH (4, 5, 6, 8 and 9) values and bile salts (2.5 and 5%), in addition to the inhibition zone against pathogens. Of the 42 strains isolated, ST1 and ST9 had higher values (p&lt;0.05) for total viable cells (31.80±0.07 and 32.51±0.05 CFU/mL × 108) respectively. In the resistance tests, strains ST1 and ST9 presented the best results, with emphasis on ST9 in the gradients of pH, high values of bile salts and larger inhibition zones against Aeromonas hydrophila and Aeromonas jandaei. The strains with the best results in the tests, ST1 and ST9, were identified by the MALDI-TOF-MS method as Enterococcus faecium. Thus, the isolated E. faecium bacteria, may be recommended as for probiotic use in farming the M. macrocephalus.
DOI: 10.6084/m9.figshare.19932252
title: Healthcare-associated Infections by Pseudomonas aeruginosa and Antimicrobial Resistance in a Public Hospital from Alagoas (Brazil)

description: ABSTRACT Introduction Pseudomonas aeruginosa infections are common worldwide, affecting mainly hospitalized patients and causing healthcare-associated infections (HAIs), with a high frequency of antibiotic resistance and complicated outcomes. Objective To investigate the P. aeruginosa frequency in HAIs in a medium/high-complexity hospital in Alagoas (Brazil) and the antibiotic susceptibility profiles of the strains. Methods A retrospective cross-sectional study was conducted from January 2013 to December 2014, when P. aeruginosa related-HAIs were evaluated after automated identification (Vitek®2) and documental analysis. Results Seventy-eight samples were positive for P. aeruginosa, with 37 (47.4%) isolates from patients of the general Intensive Care Unit (ICU) and 13 (16.7%) from the surgical unit. Tracheal secretion (25.6%), wound secretions (20.5%) and sputum (18.0%) were the main positive biological samples. Among 68 strains tested, 73.53% showed resistance to aztreonam, while cefepime, ceftriaxone and cefotaxime were not effective for any isolates (all resistant). High resistance to carbapenems imipenem (61.76%) and meropenem (55.88%) was observed, as well as 46 isolates resistant to piperacillin/tazobactam (67.64%); 47 (60.2%) from the general ICU and neonatal ICU were resistant to all antibiotics tested (MDR profile), except for colistin. Conclusion Our results indicated antibiotic-resistant P. aeruginosa highly present in ICU and the therapy with aminoglycosides and colistin as important choices in cases with failure against P. aeruginosa isolates. A constant screening of multidrug-resistant P. aeruginosa is necessary for the control in the hospital environment, evaluating the antibiotic susceptibility to guide the therapeutic choice.
DOI: 10.6084/m9.figshare.19932252.v1
title: Healthcare-associated Infections by Pseudomonas aeruginosa and Antimicrobial Resistance in a Public Hospital from Alagoas (Brazil)

description: ABSTRACT Introduction Pseudomonas aeruginosa infections are common worldwide, affecting mainly hospitalized patients and causing healthcare-associated infections (HAIs), with a high frequency of antibiotic resistance and complicated outcomes. Objective To investigate the P. aeruginosa frequency in HAIs in a medium/high-complexity hospital in Alagoas (Brazil) and the antibiotic susceptibility profiles of the strains. Methods A retrospective cross-sectional study was conducted from January 2013 to December 2014, when P. aeruginosa related-HAIs were evaluated after automated identification (Vitek®2) and documental analysis. Results Seventy-eight samples were positive for P. aeruginosa, with 37 (47.4%) isolates from patients of the general Intensive Care Unit (ICU) and 13 (16.7%) from the surgical unit. Tracheal secretion (25.6%), wound secretions (20.5%) and sputum (18.0%) were the main positive biological samples. Among 68 strains tested, 73.53% showed resistance to aztreonam, while cefepime, ceftriaxone and cefotaxime were not effective for any isolates (all resistant). High resistance to carbapenems imipenem (61.76%) and meropenem (55.88%) was observed, as well as 46 isolates resistant to piperacillin/tazobactam (67.64%); 47 (60.2%) from the general ICU and neonatal ICU were resistant to all antibiotics tested (MDR profile), except for colistin. Conclusion Our results indicated antibiotic-resistant P. aeruginosa highly present in ICU and the therapy with aminoglycosides and colistin as important choices in cases with failure against P. aeruginosa isolates. A constant screening of multidrug-resistant P. aeruginosa is necessary for the control in the hospital environment, evaluating the antibiotic susceptibility to guide the therapeutic choice.
DOI: 10.6084/m9.figshare.19932254
title: Coordination of clinical management between levels: the views of physicians in primary and specialized care in Recife, Pernambuco State, Brazil

description: This study analyzed the views of physicians towards coordination of clinical management between different levels of care. This was a cross-sectional quantitative study using data from a survey of 182 physicians in primary healthcare (PHC) and specialized care in Recife, Pernambuco State, Brazil, in 2017. The results revealed significant differences in the physicians’ experience. Considering referrals, the majority (81.32%) felt that PHC physicians referred patients to specialized care when necessary, and the proportion was higher in PHC physicians themselves (92.73%). As for agreement, two-thirds of PHC physicians (67.27%) reported that they agreed with the treatment prescribed by the specialist, while only 33.86% of the specialists agreed with the PHC physician. Concerning clinical responsibility, 89.09% of PHC physicians reported that they were clinically responsible for the patient, compared to only 43.31% of the specialists. As for recommendations, most of the interviewees (63.19%) felt that the specialists did not issue recommendations, and this proportion was higher among PHC physicians (81.82%). For waiting time, the majority (82.42%) felt that patients waited too long for appointments in specialized care, and the proportion was higher among PHC physicians (98.18%) than among specialists (75.59%). Only 16.36% of PHC physicians felt that waiting time was too long in PHC, compared to 38.58% of the medical specialists. The study’s results are consistent with similar studies and highlight the need to strengthen coordination between levels of care to achieve effective integration in healthcare networks.
DOI: 10.6084/m9.figshare.19932254.v1
title: Coordination of clinical management between levels: the views of physicians in primary and specialized care in Recife, Pernambuco State, Brazil

description: This study analyzed the views of physicians towards coordination of clinical management between different levels of care. This was a cross-sectional quantitative study using data from a survey of 182 physicians in primary healthcare (PHC) and specialized care in Recife, Pernambuco State, Brazil, in 2017. The results revealed significant differences in the physicians’ experience. Considering referrals, the majority (81.32%) felt that PHC physicians referred patients to specialized care when necessary, and the proportion was higher in PHC physicians themselves (92.73%). As for agreement, two-thirds of PHC physicians (67.27%) reported that they agreed with the treatment prescribed by the specialist, while only 33.86% of the specialists agreed with the PHC physician. Concerning clinical responsibility, 89.09% of PHC physicians reported that they were clinically responsible for the patient, compared to only 43.31% of the specialists. As for recommendations, most of the interviewees (63.19%) felt that the specialists did not issue recommendations, and this proportion was higher among PHC physicians (81.82%). For waiting time, the majority (82.42%) felt that patients waited too long for appointments in specialized care, and the proportion was higher among PHC physicians (98.18%) than among specialists (75.59%). Only 16.36% of PHC physicians felt that waiting time was too long in PHC, compared to 38.58% of the medical specialists. The study’s results are consistent with similar studies and highlight the need to strengthen coordination between levels of care to achieve effective integration in healthcare networks.
DOI: 10.6084/m9.figshare.13095380.v3
title: Data for "Genetic erosion reduces biomass temporal stability in wild fish populations."

description: Data used in path analyses. For each STATION, the dataset provides : - sample WEIGHTs used in causal models, - total fish biomass BIOM, - biomass stability BSTA, - mean individual fitness FIT, - fitness stability FSTA, - bottleneck probability BOT, - intraspecific genetic diversity IGD, - upstream-downstream gradient UGD - eutrophic gradient EG. <br>
DOI: 10.6084/m9.figshare.19932257.v1
title: Prematurity and functional gastrointestinal disorders in infancy: a cross-sectional study

description: ABSTRACT BACKGROUND: Functional gastrointestinal disorders (FGIDs) are defined as a variable combination of chronic or recurrent gastrointestinal symptoms that are not explained by structural or biochemical abnormalities. Their relationship with prematurity has been increasingly studied. OBJECTIVE: To compare the frequency of FGIDs in preterm and term infants and to evaluate whether invasive procedures during the neonatal period in preterm infants are associated with greater likelihood of FGIDs in the first two years of life. DESIGN AND SETTING: Controlled nested cross-sectional study conducted in a Brazilian university hospital. METHODS: This was a controlled nested cross-sectional study on a retrospective cohort of infants born preterm who were compared with infants born at term regarding the presence of FGIDs. Medical consultations were conducted by a single pediatric gastroenterologist to obtain information on the gestational and neonatal periods and on clinical manifestations of the digestive tract. The Rome IV criteria for the diagnosis of FGIDs were used. RESULTS: A total of 197 infants (&lt; 24 months), including 99 preterm and 98 term infants, were studied. Infant regurgitation was more prevalent in term infants (35.1% and 15.6%; P &lt; 0.001). The frequencies of other FGIDs (infant colic, functional constipation, functional diarrhea and infant dyschezia) in preterm infants did not differ from those of term infants (P &gt; 0.05). No relationship was found between invasive procedures during the neonatal period and development of FGIDs in preterm infants. CONCLUSION: Infants born preterm did not have higher frequency of FGIDs in the first two years of life.