cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23514657
title: 2-5 Province - Room air conditioners.xlsx

description: 2-5 Province - Room air conditioners.xlsx
DOI: 10.6084/m9.figshare.23514657.v1
title: 2-5 Province - Room air conditioners.xlsx

description: 2-5 Province - Room air conditioners.xlsx
DOI: 10.6096/mistrals-hymex.lightning.euclid
title: EUCLID,

description: No abstract available
DOI: 10.6084/m9.figshare.23514660
title: 3-1 Household basic information.xlsx

description: 3-1 Household basic information.xlsx
DOI: 10.6084/m9.figshare.23514660.v1
title: 3-1 Household basic information.xlsx

description: 3-1 Household basic information.xlsx
DOI: 10.6084/m9.figshare.24911478
title: Appendices for the following article: Kurita, T., and Toda, M. (2024). Genetic and morphological studies on <i>Goniurosaurus</i> <i>kuroiwae</i> (Squamata: Eublepharidae), with a description of a new species from the northern part of Okinawajima Island, Ryukyu Archipelago, Japan. <i>Current Herpetology</i>, <i>43</i>(1), 86–114. doi: https://doi.org/10.5358/hsj.43.86

description: <i>Goniurosaurus k</i>. <i>kuroiwae</i> consists of two genetically diverged entities (i.e., northern and southern lineages) that are geographically separated by a narrow hybrid zone in the north–central part of Okinawajima Island, Ryukyu Archipelago, Japan. We described the populations of the northern part of Okinawajima and Kourijima as a new species, <i>Goniurosaurus nebulozonatus</i>.
DOI: 10.6084/m9.figshare.24911478.v1
title: Appendices for the following article: Kurita, T., and Toda, M. (2024). Genetic and morphological studies on <i>Goniurosaurus</i> <i>kuroiwae</i> (Squamata: Eublepharidae), with a description of a new species from the northern part of Okinawajima Island, Ryukyu Archipelago, Japan. <i>Current Herpetology</i>, <i>43</i>(1), 86–114. doi: https://doi.org/10.5358/hsj.43.86

description: <i>Goniurosaurus k</i>. <i>kuroiwae</i> consists of two genetically diverged entities (i.e., northern and southern lineages) that are geographically separated by a narrow hybrid zone in the north–central part of Okinawajima Island, Ryukyu Archipelago, Japan. We described the populations of the northern part of Okinawajima and Kourijima as a new species, <i>Goniurosaurus nebulozonatus</i>.
DOI: 10.6084/m9.figshare.23514663
title: 3-2 Household EEG-related information.xlsx

description: 3-2 Household EEG-related information.xlsx
DOI: 10.6084/m9.figshare.23514663.v1
title: 3-2 Household EEG-related information.xlsx

description: 3-2 Household EEG-related information.xlsx
DOI: 10.6084/m9.figshare.23514669
title: 4-1 Features (explanatory variables) in regional models.xlsx

description: 4-1 Features (explanatory variables) in regional models.xlsx
DOI: 10.6084/m9.figshare.23514672
title: 4-2 Hyperparameters of the best models.xlsx

description: 4-2 Hyperparameters of the best models.xlsx
DOI: 10.6084/m9.figshare.19844652.v1
title: Additional file 2 of Genome-wide association study of eigenvectors provides genetic insights into selective breeding for tomato metabolites

description: Additional file 2: Fig. S1. Differentially expressed genes (DEGs) and enrichment analysis. Heat map for DEGs between the PIM and CER groups (A), as well as the CER and BIG groups (B). The Gene ontology (GO) enrichment analysis for DEGs between the PIM and CER groups (C), as well as the CER and BIG groups (D). The KEGG pathway enrichment analysis for DEGs between the PIM and CER groups (E), as well as the CER and BIG groups (F). Fig. S2. Local Manhattan plot (A) and distribution of nucleotide diversity (𝜋) of the PIM, CER, BIG groups for fw11.3 in chromosome 11 (B). Two-Mb zoom of single marker (-log10) P value for GWAS and 100-kb sliding windows GWAS on fruit weight, and the green bars above the chromosomes denote the identified improvement sweeps by EigenGWAS. Fig. S3. GWAS on SIFM0533 and SIFM1279 during domestication, and SIFM0104, SIFM0123, SIFM0154, SIFM0155, SIFM0166, SIFM0656 and SIFM1279 during improvement. Red arrows indicate those significant association signals located in domestication/improvement sweeps using EigenGWAS or 𝜋. Besides these polyphenols, in Supplementary Fig. 4, SIFM0600 were analyzed during domestication and improvement, respectively. Fig. S4. GWAS on DGPC acid. Single marker (-log10) P value for GWAS on DGPC acid during domestication (A) and improvement (B), respectively. The horizontal axis shows chromosome of tomato, while the vertical axis indicates -log10 transformed observed P value. Fig. S5. A genetic region under improvement across the CER and BIG groups for DGPC acid. A Manhattan plot of GWAS on DGPC acid across all chromosome, averaged over 100-kb windows during improvement. Color-highlighted regions indicate peaks found in both the GWAS and EigenGWAS analyses. B EigenGWAS P values in relation to DGPC acid GWAS P values averaged over 100-kb windows. Green dots indicate those windows in the top 1% from GWAS, blue dots indicate those windows above the threshold of EigenGWAS, and purple dots correspond with the highlighted regions in (A). Fig. S6. Heatmap for those DEGs in the selected sweeps satisfy the EigenGWAS and GWAS in low and high content of DGPC acid during improvement. Fig. S7. GWAS on TSPM. Single marker (-log10) P value for GWAS on TSPM during domestication (A) and improvement (B), respectively. The horizontal axis shows chromosome of tomato, while the vertical axis indicates -log10 transformed observed P values. Fig. S8. Spearman's rank correlation coefficient between fruit weight and TSPM. The y axis (TSPM content) and x axis (fruit weight) were log2 transformed, respectively. Lines and shaded areas are fitted values and 95% confidence limits from general linear models.
DOI: 10.6084/m9.figshare.19844649
title: Additional file 1 of Genome-wide association study of eigenvectors provides genetic insights into selective breeding for tomato metabolites

description: Additional file 1: Table S1. Summary of the sampled collection of tomato. Table S2. Information of 258 selected metabolites from 980 metabolites. Table S3. Putative EigenGWAS and π domestication sweeps. Table S4. Putative EigenGWAS and π improvement sweeps. Table S5. Genes within the putative EigenGWAS domestication sweeps. Table S6. Genes within the putative EigenGWAS improvement sweeps. Table S7. GO enrichment analysis of DEGs. Table S8. KEGG enrichment analysis of DEGs. Table S9. Summary of 29 genes/QTLs associated with tomato plant and fruit. Table S10. Summary of 12 significant association signals related polyphenols during domestication and improvement. Table S11. β-D-glucopyranosyl-caffeic acid (DGPC acid) selected genes in Eigen domestication and improvement. Table S12. The results of eQTL within the PIM and CER groups. Table S13. The results of eQTL within the CER and BIG groups. Table S14. N',N”,N”'-Trisinapoylspermine (TSPM) selected genes in Eigen domestication and improvement. Table S15. The primers of SlCGT used for the qRT-PCR experiment.
DOI: 10.6084/m9.figshare.19844649.v1
title: Additional file 1 of Genome-wide association study of eigenvectors provides genetic insights into selective breeding for tomato metabolites

description: Additional file 1: Table S1. Summary of the sampled collection of tomato. Table S2. Information of 258 selected metabolites from 980 metabolites. Table S3. Putative EigenGWAS and π domestication sweeps. Table S4. Putative EigenGWAS and π improvement sweeps. Table S5. Genes within the putative EigenGWAS domestication sweeps. Table S6. Genes within the putative EigenGWAS improvement sweeps. Table S7. GO enrichment analysis of DEGs. Table S8. KEGG enrichment analysis of DEGs. Table S9. Summary of 29 genes/QTLs associated with tomato plant and fruit. Table S10. Summary of 12 significant association signals related polyphenols during domestication and improvement. Table S11. β-D-glucopyranosyl-caffeic acid (DGPC acid) selected genes in Eigen domestication and improvement. Table S12. The results of eQTL within the PIM and CER groups. Table S13. The results of eQTL within the CER and BIG groups. Table S14. N',N”,N”'-Trisinapoylspermine (TSPM) selected genes in Eigen domestication and improvement. Table S15. The primers of SlCGT used for the qRT-PCR experiment.
DOI: 10.6084/m9.figshare.23514684
title: 4-2 Hyperparameters of the best models.json

description: 4-2 Hyperparameters of the best models.json
DOI: 10.6084/m9.figshare.23514684.v1
title: 4-2 Hyperparameters of the best models.json

description: 4-2 Hyperparameters of the best models.json
DOI: 10.6084/m9.figshare.19844652
title: Additional file 2 of Genome-wide association study of eigenvectors provides genetic insights into selective breeding for tomato metabolites

description: Additional file 2: Fig. S1. Differentially expressed genes (DEGs) and enrichment analysis. Heat map for DEGs between the PIM and CER groups (A), as well as the CER and BIG groups (B). The Gene ontology (GO) enrichment analysis for DEGs between the PIM and CER groups (C), as well as the CER and BIG groups (D). The KEGG pathway enrichment analysis for DEGs between the PIM and CER groups (E), as well as the CER and BIG groups (F). Fig. S2. Local Manhattan plot (A) and distribution of nucleotide diversity (𝜋) of the PIM, CER, BIG groups for fw11.3 in chromosome 11 (B). Two-Mb zoom of single marker (-log10) P value for GWAS and 100-kb sliding windows GWAS on fruit weight, and the green bars above the chromosomes denote the identified improvement sweeps by EigenGWAS. Fig. S3. GWAS on SIFM0533 and SIFM1279 during domestication, and SIFM0104, SIFM0123, SIFM0154, SIFM0155, SIFM0166, SIFM0656 and SIFM1279 during improvement. Red arrows indicate those significant association signals located in domestication/improvement sweeps using EigenGWAS or 𝜋. Besides these polyphenols, in Supplementary Fig. 4, SIFM0600 were analyzed during domestication and improvement, respectively. Fig. S4. GWAS on DGPC acid. Single marker (-log10) P value for GWAS on DGPC acid during domestication (A) and improvement (B), respectively. The horizontal axis shows chromosome of tomato, while the vertical axis indicates -log10 transformed observed P value. Fig. S5. A genetic region under improvement across the CER and BIG groups for DGPC acid. A Manhattan plot of GWAS on DGPC acid across all chromosome, averaged over 100-kb windows during improvement. Color-highlighted regions indicate peaks found in both the GWAS and EigenGWAS analyses. B EigenGWAS P values in relation to DGPC acid GWAS P values averaged over 100-kb windows. Green dots indicate those windows in the top 1% from GWAS, blue dots indicate those windows above the threshold of EigenGWAS, and purple dots correspond with the highlighted regions in (A). Fig. S6. Heatmap for those DEGs in the selected sweeps satisfy the EigenGWAS and GWAS in low and high content of DGPC acid during improvement. Fig. S7. GWAS on TSPM. Single marker (-log10) P value for GWAS on TSPM during domestication (A) and improvement (B), respectively. The horizontal axis shows chromosome of tomato, while the vertical axis indicates -log10 transformed observed P values. Fig. S8. Spearman's rank correlation coefficient between fruit weight and TSPM. The y axis (TSPM content) and x axis (fruit weight) were log2 transformed, respectively. Lines and shaded areas are fitted values and 95% confidence limits from general linear models.
DOI: 10.15468/dl.ygwfkq
title: Occurrence Download

description: A dataset containing 134 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scaevola balansae Guillaumin"
 ]
}

 The dataset includes 134 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102048-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.546x26
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saussurea baroniana Diels"
 ]
}

 The dataset includes 17 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102049-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yn9rfe
title: Occurrence Download

description: A dataset containing 5245 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salix waldsteiniana Willd."
 ]
}

 The dataset includes 5245 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102050-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8j9qqq
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scaevola barrierei A.S.Wulff & Munzinger"
 ]
}

 The dataset includes 12 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102051-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ag4gdm
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saussurea bella Y.Ling"
 ]
}

 The dataset includes 45 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102052-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nv3mnf
title: Occurrence Download

description: A dataset containing 493 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scaevola beckii Zahlbr."
 ]
}

 The dataset includes 493 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102053-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v4t8w6
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salix weixiensis Y.L.Chou"
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102054-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gg4pse
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saussurea bhutkesh Fujikawa & H.Ohba"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102055-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cj85tc
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sagina belonophylla Mattf."
 ]
}

 The dataset includes 38 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102056-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u8p5c9
title: Occurrence Download

description: A dataset containing 627 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scaevola chamissoniana Gaudich."
 ]
}

 The dataset includes 627 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102058-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qcbama
title: Occurrence Download

description: A dataset containing 748 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salix wilhelmsiana M.Bieb."
 ]
}

 The dataset includes 748 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102059-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tsz6k8
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saussurea blanda Schrenk"
 ]
}

 The dataset includes 16 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102061-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10929440
title: Localized ultra-low velocity zone as a strong scatterer at the core-mantle boundary beneath Central America
DOI: 10.5281/zenodo.10083052
title: Localized ultra-low velocity zone as a strong scatterer at the core-mantle boundary beneath Central America
DOI: 10.5281/zenodo.10083053
title: PKP waveforms
DOI: 10.5281/zenodo.10907477
title: ELITE SLWR: global 1km 5-min SLDR at SIN Grid-Aqua (2003_047-059)

description: The Essential thermal Infrared remoTe sEnsing (ELITE) product suite currently has four types of products, including land surface temperature (LST: clear-sky and all-sky), emissivity (NBE: narrowband emissivity; BBE: broadband emissivity; and spectral emissivity), the component of surface radiation and energy budget (SLUR: surface longwave upwelling radiation; SLDR: surface longwave downward radiation SLDR; SLNR: surface longwave net radiation), and the component of Earth’s radiation budget (OLR; outgoing longwave radiation; RSR: reflected solar radiation). The spatial-temporal resolutions of the ELITE products are mainly determined by the employed satellite data sources. For more information about ELITE products, please refer to the website (https://elite.bnu.edu.cn).

 

This dataset is ELITE surface longwave downward radiation (SLDR) product at 1km spatial resolution and 5-min temporal resolution. It is provided on a Sinusoidal grid and ranges from 2000 to 2022 (continuously updated). This dataset was generated from the Moderate Resolution Imaging Spectrometer (MODIS) data, ELITE emissivity product and MERRA2 reanalysis data using the algorithms developed by Cheng et al. (2016), Cheng et al. (2017) and Yang and Cheng. (2020).

 

This is the ELITE SLDR product in 2003 (DOY: 047-059). Please click here to download the ELITE SLDR product in 2003 (DOY: 060-074).

Dataset Characteristics:



Spatial Coverage: Global

Temporal Coverage: 2003-02-16 ~ 2003-02-28

Spatial Resolution: 1 km

Temporal Resolution: 5-min

Data Format: h5

Projection: Sinusoidal

Scale: 0.05

Offset: -1000


 

Citation (Please cite these papers when using the data):



Cheng, J., & Liang, S. (2016). Global estimates for high spatial resolution clear-sky land surface upwelling longwave radiation from MODIS data. IEEE Transactions on Geoscience and Remote Sensing, 54, 4115-4129

Cheng, J., Liang, S., Wang, W., & Guo, Y. (2017). An efficient hybrid method for estimating clear-sky surface downward longwave radiation from MODIS data. Journal of Geophysical Research: Atmospheres, 122, 2616-2630

Yang, F., & Cheng, J. (2020). A framework for estimating cloudy sky surface downward longwave radiation from the derived active and passive cloud property parameters. Remote Sensing of Environment, 248, 111972
DOI: 10.5281/zenodo.10907478
title: ELITE SLWR: global 1km 5-min SLDR at SIN Grid-Aqua (2003_047-059)

description: The Essential thermal Infrared remoTe sEnsing (ELITE) product suite currently has four types of products, including land surface temperature (LST: clear-sky and all-sky), emissivity (NBE: narrowband emissivity; BBE: broadband emissivity; and spectral emissivity), the component of surface radiation and energy budget (SLUR: surface longwave upwelling radiation; SLDR: surface longwave downward radiation SLDR; SLNR: surface longwave net radiation), and the component of Earth’s radiation budget (OLR; outgoing longwave radiation; RSR: reflected solar radiation). The spatial-temporal resolutions of the ELITE products are mainly determined by the employed satellite data sources. For more information about ELITE products, please refer to the website (https://elite.bnu.edu.cn).

 

This dataset is ELITE surface longwave downward radiation (SLDR) product at 1km spatial resolution and 5-min temporal resolution. It is provided on a Sinusoidal grid and ranges from 2000 to 2022 (continuously updated). This dataset was generated from the Moderate Resolution Imaging Spectrometer (MODIS) data, ELITE emissivity product and MERRA2 reanalysis data using the algorithms developed by Cheng et al. (2016), Cheng et al. (2017) and Yang and Cheng. (2020).

 

This is the ELITE SLDR product in 2003 (DOY: 047-059). Please click here to download the ELITE SLDR product in 2003 (DOY: 060-074).

Dataset Characteristics:



Spatial Coverage: Global

Temporal Coverage: 2003-02-16 ~ 2003-02-28

Spatial Resolution: 1 km

Temporal Resolution: 5-min

Data Format: h5

Projection: Sinusoidal

Scale: 0.05

Offset: -1000


 

Citation (Please cite these papers when using the data):



Cheng, J., & Liang, S. (2016). Global estimates for high spatial resolution clear-sky land surface upwelling longwave radiation from MODIS data. IEEE Transactions on Geoscience and Remote Sensing, 54, 4115-4129

Cheng, J., Liang, S., Wang, W., & Guo, Y. (2017). An efficient hybrid method for estimating clear-sky surface downward longwave radiation from MODIS data. Journal of Geophysical Research: Atmospheres, 122, 2616-2630

Yang, F., & Cheng, J. (2020). A framework for estimating cloudy sky surface downward longwave radiation from the derived active and passive cloud property parameters. Remote Sensing of Environment, 248, 111972
DOI: 10.5281/zenodo.10929455
title: Localized ultra-low velocity zone as a strong scatterer at the core-mantle boundary beneath Central America
DOI: 10.5281/zenodo.10929456
title: Localized ultra-low velocity zone as a strong scatterer at the core-mantle boundary beneath Central America
DOI: 10.18141/2331306
title: Rittenhouse et al. 1960s Historical Archived Produced Water Dataset

description: Around 1960, a private company entered into a research agreement to analyze for dissolved solids in water produced from &gt;800 fields in the U.S. and Canada.. The elemental compositions provided were measured spectrochemically by Rittenhouse et al. The information has been made available to the public as a public service, but the names off of the companies and exact well locations have been removed. The samples are now located at the University of Texas in Austin. More details can be found in the following reference: Gordon Rittenhouse, Robert B. Fulton, Robert J. Grabowski, Joseph L. Bernard, Minor elements in oil-field waters, Chemical Geology, Volume 4, Issues 1–2, 1969, Pages 189-209, ISSN 0009-2541, https://doi.org/10.1016/0009-2541(69)90045-X.
DOI: 10.15468/dl.k4ag6h
title: Occurrence Download

description: A dataset containing 1512 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sagina caespitosa (J.Vahl) Lange"
 ]
}

 The dataset includes 1512 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102062-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.