cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21233/6qj7-xs94
title: B9457 pollen surface sample dataset

description: Raw data for the B9457 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/5w2v-fc90
title: Moidach More testate amoebae surface sample dataset

description: Raw data for the Moidach More testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.tgnq44
title: Occurrence Download

description: A dataset containing 451 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sicydium gymnogaster Ogilvie-Grant, 1884"
 ]
}

 The dataset includes 451 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024542-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/ystr-pn19
title: Gerzensee pollen dataset

description: Raw data for the Gerzensee pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.nx99fk
title: Occurrence Download

description: A dataset containing 216 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Angelica genuflexa Nutt.",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2010",
 "HasCoordinate is true"
 ]
}

 The dataset includes 216 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024541-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/fsja-3r88
title: ColonLake4 pollen surface sample dataset

description: Raw data for the ColonLake4 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/sc63-2p97
title: Haarstad Mound vertebrate fauna dataset

description: Raw data for the Haarstad Mound vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/wf41-0p81
title: Giblin's Farm ostracode surface sample dataset

description: Raw data for the Giblin's Farm ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/3vdg-yk41
title: Barney's Lake water chemistry dataset

description: Raw data for the Barney's Lake water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/ckmr-z834
title: Airag Lake ostracode surface sample dataset

description: Raw data for the Airag Lake ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.15369544
title: Data for "Chromatin Dynamics are Highly Subdiffusive Across Seven Orders of Magnitude"

description: For MINFLUX experiments we provide both the raw .msr files as well as extracted .npy (which can be read by python's numpy library). This manual extraction was performed in Imspector v16.3.16520. For SPT experiments we provide tracks in .xml format. Finally, data.zip contains processed data in HDF5 (.h5) format; see below for details.

We strongly recommend also checking our code repository on GitHub or Zenodo, especially for using the processed data in data.zip.

Files



raw_data__MINFLUX__L-Sweep__msr.zip: data for identification of L (probing pattern diameter)

raw_data__MINFLUX__L-Sweep__npy.zip: tracks from L-Sweep in numpy .npy format

raw_data__MINFLUX__production__msr.zip : data from production run

raw_data__MINFLUX__production__npy.zip : production tracks in .npy format

raw_data__SPT.zip : all SPT tracks as .xml files

data.zip : processed data set and other useful things, everything HDF5



20250411_chromatin_dynamics_all_data.h5 : full data set (MINFLUX + SPT + SRLCI) used for analysis in the paper

20250327_(fitres|mci)_NPFit_aGparam_(U2OS|mESC).h5 : results of Bayesian fitting

2022_Fbn2_full_data.h5 : SRLCI data set from (Gabriele 2022), for convenience
DOI: 10.21233/x5bs-h720
title: Tyson Lake diatom dataset

description: Raw data for the Tyson Lake diatom dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/wyv1-yk25
title: LDDsite5799 water chemistry dataset

description: Raw data for the LDDsite5799 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/hrc4-3p93
title: LR51 pollen surface sample dataset

description: Raw data for the LR51 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/krqy-7s71
title: Little Averill diatom bottom sample dataset

description: Raw data for the Little Averill diatom bottom sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.29009207
title: S3.1172基因组信息

description: 毕业论文补充材料3
DOI: 10.21233/svrs-d416
title: Spring Creek water chemistry dataset

description: Raw data for the Spring Creek water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/p08m-4s67
title: Mukhrino Mire Complex testate amoebae surface sample dataset

description: Raw data for the Mukhrino Mire Complex testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.4d965r
title: Occurrence Download

description: A dataset containing 3923 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Month is one of (January, February)",
 "OccurrenceStatus is Present",
 "TaxonKey is Melanitta deglandi (Bonaparte, 1850)",
 "Year 2011-2011"
 ]
}

 The dataset includes 3923 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024544-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m5tgrs
title: Occurrence Download

description: A dataset containing 8222 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Month is one of (March, April, May, June, July, August, September, October, November, December)",
 "OccurrenceStatus is Present",
 "TaxonKey is Melanitta deglandi (Bonaparte, 1850)",
 "Year 2010-2010"
 ]
}

 The dataset includes 8222 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024543-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/6my9-6v55
title: Loughberry Lake diatom dataset

description: Raw data for the Loughberry Lake diatom dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/7sp0-hd80
title: ELA Lake #240 ostracode surface sample dataset

description: Raw data for the ELA Lake #240 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/19cw-3713
title: LDDsite3318 water chemistry dataset

description: Raw data for the LDDsite3318 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/bned-b969
title: Lake Logtavern Lake diatom surface sample dataset

description: Raw data for the Lake Logtavern Lake diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/yr5z-5143
title: Bridgeport [20SA620] macroinvertebrate dataset

description: Raw data for the Bridgeport [20SA620] macroinvertebrate dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/149s-c457
title: Toconce charcoal dataset

description: Raw data for the Toconce charcoal dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/2754-9391
title: Clairmont Lake ostracode surface sample dataset

description: Raw data for the Clairmont Lake ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/w5wp-5r94
title: Laguna El Sosneado pollen dataset

description: Raw data for the Laguna El Sosneado pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/51t8-jx52
title: LDDsite1133 water chemistry dataset

description: Raw data for the LDDsite1133 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/8dnj-vz04
title: Vesper Lake water chemistry dataset

description: Raw data for the Vesper Lake water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/c97j-xb85
title: Qizimeishan testate amoebae surface sample dataset

description: Raw data for the Qizimeishan testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/8hdq-gp64
title: Blatenská slať insect dataset

description: Raw data for the Blatenská slať insect dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.t9k8kt
title: Occurrence Download

description: A dataset containing 100694 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Gymnorhinus cyanocephalus Wied-Neuwied, 1841",
 "Year is greater than or equal to 1950",
 {
 "or" : [
 "GadmGid is USA",
 "GadmGid is CAN",
 "GadmGid is MEX"
 ]
 }
 ]
}

 The dataset includes 100694 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024538-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/b1gm-m215
title: McReynolds Reservoir water chemistry dataset

description: Raw data for the McReynolds Reservoir water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/v0wv-aa94
title: Bay of Quinte ostracode surface sample dataset

description: Raw data for the Bay of Quinte ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.n99ea6
title: Occurrence Download

description: A dataset containing 222 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Month is one of (January, February)",
 "OccurrenceStatus is Present",
 "TaxonKey is Melopsittacus undulatus (Shaw, 1805)",
 "Year 2011-2011"
 ]
}

 The dataset includes 222 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024547-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/9s3n-6r82
title: Echo Lake/east end water chemistry dataset

description: Raw data for the Echo Lake/east end water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.8pthsc
title: Occurrence Download

description: A dataset containing 2319 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Month is one of (March, April, May, June, July, August, September, October, November, December)",
 "OccurrenceStatus is Present",
 "TaxonKey is Melopsittacus undulatus (Shaw, 1805)",
 "Year 2010-2010"
 ]
}

 The dataset includes 2319 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024546-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/2gd6-ze26
title: Nevali Cori vertebrate fauna dataset

description: Raw data for the Nevali Cori vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/6q3x-7t60
title: 40 [HFL40] water chemistry dataset

description: Raw data for the 40 [HFL40] water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.rv2exs
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((117.97 29.944,119.649 29.944,119.649 31.323,117.97 31.323,117.97 29.944))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Phyllostachys Siebold & Zucc."
 ]
}

 The dataset includes 45 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024548-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/kmt3-g883
title: EdRh-VP vertebrate fauna dataset

description: Raw data for the EdRh-VP vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/pc9y-cz21
title: LDDsite2420 ostracode surface sample dataset

description: Raw data for the LDDsite2420 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/9zqe-rr72
title: Haile 8A vertebrate fauna dataset

description: Raw data for the Haile 8A vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/c9h2-2r47
title: Kings Hill P. water chemistry dataset

description: Raw data for the Kings Hill P. water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.29009042
title: Project data and code

description: Data and code to reproduce the analyses and figures in "<i>Who is paying the extinction debt? Phylogenetic and functional structuring on Greek islands is shaped by sea-level rise since the Last Glacial Maximum</i>". DOI: xxxxx
DOI: 10.21233/v8my-7k69
title: Lotto Lake water chemistry dataset

description: Raw data for the Lotto Lake water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.svv5zn
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anoplophora glabripennis (Motschulsky, 1854)",
 "Country is Germany",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024549-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/84rd-tq94
title: Czarne testate amoebae surface sample dataset

description: Raw data for the Czarne testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.