cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/ty68672dnz
title: Sexually Transmitted Diseases in Females for Data Security and Privacy in 3D Modeling for Healthcare

description: Overview: This dataset comprises information collected from 450 females and is utilized for research in the field of Data Security and Privacy in 3D Modeling for Healthcare. The dataset is focused on the prevalence and analysis of sexually transmitted diseases (STDs) in females. It provides valuable insights into the demographics, behaviors, and health status of the study participants. Data Fields: The dataset includes the following key fields for each of the 450 females: S.no: A unique identifier assigned to each participant. Age: The age of the female participant, ranging from young adults to middle-aged individuals. Intimate Partners: The number of intimate partners the female has had, indicating their level of sexual activity. Protection Usage: A binary variable (0: Never, 1: Sometimes, 2: Always) representing the usage of protection during sexual activity. Symptoms: A binary variable (0: No symptoms, 1: Symptoms) indicating the presence or absence of symptoms related to STDs. Location: The location of the participant, categorized into general city/district areas, which can provide geographical context. Education: A binary variable (0: Low education, 1: High education) representing the education level of the participant. STD Testing History: A binary variable (0: No, 1: Yes) indicating whether the participant has a history of undergoing anonymous STD testing. STD Status: A binary variable (0: Uninfected, 1: Infected) reflecting the STD status of the female participants. Usage: This dataset serves as a valuable resource for researchers in the fields of healthcare, data security, and 3D modeling. Researchers can leverage this dataset to explore the relationship between demographic factors, behaviors, and STD prevalence among females. It is particularly relevant for studies that aim to enhance data security and privacy while utilizing 3D modeling techniques for healthcare applications. Data Privacy and Ethics: The collection of this dataset adheres to ethical and privacy considerations, with a focus on ensuring the anonymity and confidentiality of the study participants. Personal identifiers have been removed to protect the privacy of the individuals. Citation: If you intend to use this dataset in your research, please consider citing the source and acknowledging the data collection process. Proper citation helps maintain transparency and credit the researchers and institutions involved in data collection.
DOI: 10.6084/m9.figshare.19235748.v3
title: <b>Genome of flatsedge </b><b>Cyperus iria</b><b> (Cyperacerae)</b>

description: Genome and genome annotation files.
DOI: 10.6084/m9.figshare.19258319.v1
title: Dataset on Navigation ability in young, middle-aged and older adults: different domains of knowledge and their relationship with visuospatial factors

description: 87 participants, grouped by age: 30 young (20-30 years; 15 females); 27 middle-aged (55-64 years; 16 females); and 30 older (65-75 years; 15 females).<br> Information about: <br>- age, sex, education, MoCA, vocabulary - visuospatial working memory task (jigsaw puzzle test), Embedded Figure Test - questionnaires on wayfinding inclinations: sense of direction and spatial representation scale; attitudes toward orientation task scale (pleasure in exploring places) - Navigation performance: landmark recognition, route repetition, shortest path finding, egocentric and allocentric pointing, landmark order, map drawing tasks.<br>
DOI: 10.6084/m9.figshare.24534697.v2
title: <b>psychological counseling</b><b> dialogue dataset</b>

description: This is a dataset of counseling conversations covering a wide range of disease labels and related metadata information to help advance scientific research on mental health.Note: We have iteratively updated the version, so please use the latest dated version.
DOI: 10.6084/m9.figshare.26391265.v1
title: LDLC estimation database.xlsx

description: Background: The most commonly used method for low-density lipoprotein cholesterol (LDLC) estimation is the Friedewald equation, which has notable limitations. However, more accurate methods have been proposed. This study investigates the advantages and limitations of these methods and identifies the contexts in which each equation is most or least applicable. Methods: A cohort of 222 individuals underwent a standard lipid profile, directly measured LDLC (dLDLC). LDLC was also estimated using the Friedewald, Martin-Hopkins, and Sampson equations. The differences (�lta) between estimated and measured LDLC were analyzed in relation to dLDLC, high-density lipoprotein cholesterol (HDLC), and triglyceride levels. Results: The �lta was significantly lower (p&lt;0.0001) for the Martin-Hopkins (-8.8±9.8) and Sampson (-9.5±9.2) equations compared to Friedewald (-12.2±9.2). All equations increasingly underestimated LDLC as dLDLC levels decreased. �lta of the Martin-Hopkins equation showed significant positive correlations with dLDLC (≤130mg/dL) and triglycerides, and a significant negative correlation with HDLC. In a subgroup of 30 individuals with extreme �lta values, patterns of gross underestimation were observed, particularly when low LDLC, low triglycerides, and high HDLC coincided. Conclusions: The Martin-Hopkins equation is a superior method for LDLC estimation and a valuable tool of precision medicine. However, clinicians and laboratory professionals must be aware of its limitations and recognize patterns that could lead to significant LDLC underestimation. We propose an algorithm for clinical laboratories to provide personalized LDLC assessments.
DOI: 10.6084/m9.figshare.27134151.v1
title: Data from Naqing and Qiaotou sections

description: Data from Naqing and Qiaotou sections
DOI: 10.26180/5ca988ad25ab3
title: Labscript suite archive

description: This contains an copy of the labscript suite repositories so that a permanent DOI can be included in Philip Thomas Starkey's thesis. This will serve as an archived record of the labscript suite should the main respositories at https://bitbucket.org/labscript_suite/ cease to exist.
DOI: 10.6084/m9.figshare.20072789.v1
title: Additional information: ambient temperature and sex info

description: Ambient temperature data from temperature logger (stensoffa.temp): timestamp, temperature (temp) and data. Information about individuals i.e. sex (sexinfo): frequency of attached transmitter and sex.
DOI: 10.6084/m9.figshare.22148063.v1
title: Table S7.doc

description: According to the RT-qPCR analysis, this section summarizes the Cycle threshold of each group (JAK2, STAT3, IL-17).
DOI: 10.6084/m9.figshare.22688302.v3
title: GWAS summary data of hypothalamus in UKB white british population

description: GWAS summary data of hypothalamus
DOI: 10.6084/m9.figshare.27102319.v1
title: Data for the Paper: Human Leptospirosis in Sudan; Seroprevalence Study inHigh-Risk Geographic Area (Part-1)

description: Studies on the involvement of leptospires in human febrile illness or in renal disease are almost non-existing in Sudan. This study aims at assessing human exposure to pathogenic leptospires via detecting specific IgM seroprevalence within a population of febrile patients and those with end stage renal disease attending medical facilities in Al-Jazira agriculture state in Sudan. During five months period (April to September, 2014), total of 460 patients were recruited and tested for specific anti-leptospiral IgM antibodies using rapid lateral flow immunosorbent assay. Standardized structured questionnaire was used to collect relevant information. Data were analyzed using statistical package program IBM/SPSS version 21. Overall anti-leptospiral IgM seroprevalence was 10.2% (n=47/460). It was 14% (n=33/235) in febrile patients attending the outpatient of emergency hospitals/health center, 45.5% (n=5/11) in febrile inpatients in the internal medicine wards, and 4.2% (n=9/214) in those on hemodialysis. Seroprevalence was 0% (n=0/11) among healthy workers at Wad Madani slaughterhouse. Most frequent clinical manifestations were prostration (61.7%), arthralgia (51.1%), headache (46.8%) and myalgia (31.9%). This study demonstrates high leptospirosis seroprevalence in febrile attendees of hospitals and those on hemodialysis, suggesting high endemicity of the infection in Al-Jazira state in Sudan.
DOI: 10.6084/m9.figshare.13128263.v1
title: Supplementary Material for: The Pro-Differentiation Effect of Doxycycline on Human SZ95 Sebocytes

description: <b><i>Background:</i></b> Despite their widespread clinical use in both acne vulgaris and rosacea, the effects of tetracyclines on sebocytes have not been investigated until now. Sebaceous glands are central to the pathogenesis of acne and may be important in the development of rosacea. <b><i>Objective:</i></b> The aim of this study was to assess the effects of doxycycline on the immortalized SZ95 sebaceous gland cell line as a model for understanding possible effectiveness on the sebaceous glands in vivo. <b><i>Methods:</i></b> The effects of doxycycline on SZ95 sebocyte numbers, viability, and lipid content as well as its effects on the mRNA levels of peroxisome proliferator-activated receptors α and γ, in comparison to the peroxisome proliferator-activated receptor γ agonist troglitazone, were investigated. <b><i>Results:</i></b> Doxycycline reduced the cell number and increased the lipid content of SZ95 sebocytes in vitro after 2 days of treatment. These doxycycline effects may be explained by an upregulation of peroxisome proliferator-activated receptor γ mRNA levels at 12 and 24 h, whereas troglitazone already upregulated peroxisome proliferator-activated receptor γ levels after 6 h. Both compounds did not influence peroxisome proliferator-activated receptor α mRNA levels. <b><i>Conclusion:</i></b> These new findings illustrate a previously unknown effect of doxycycline on sebocytes, which may be relevant to their modulation of disorders of the pilosebaceous unit, such as acne vulgaris and rosacea.
DOI: 10.6084/m9.figshare.17702354.v1
title: Supplementary Material for: Comparison of Urine Flow Cytometry on the UF-1000i System and Urine Culture of Urine Samples from Urological Patients

description: <b><i>Introduction:</i></b> The aims of this study were to evaluate urine flow cytometry (UFC) as a tool to screen urine samples of urological patients for bacteriuria and to compare UFC and dipstick analysis with urine culture in a patient cohort at a urological department of a university hospital. <b><i>Methods and Material:</i></b> We screened 662 urine samples from urological patients (75.2% male; 80.7% inpatients; mean age 58 years). UFC results were compared to microbiological urine culture. <b><i>Results:</i></b> The accuracy in using the UFC-based parameters for detecting cultural bacteriuria was 91.99% and 88.97% for ≥10<sup>5</sup> colony-forming units (CFU)/mL and ≥10<sup>4</sup> CFU/mL, respectively. UFC and leukocyte dipstick analysis measured leukocyturia similarly (Pearson correlation coefficient 0.87, <i>p</i> value &lt;0.01%), but dipstick analysis scored less accurately on bacteriuria (accuracy 59.37% and 62.69%). UFC remained effective in subgroup analysis of patients of both sexes and with different urological conditions with its overall use only slightly impaired when assessing gross hematuria (NPV 84.62% for ≥10<sup>4</sup> CFU/mL). UFC also reliably removed those urine samples below cutoffs with negative predictive values of 99.28% for ≥10<sup>5</sup> CFU/mL and 95.86% for ≥10<sup>4</sup> CFU/mL. <b><i>Conclusion:</i></b> Counting bacteria with UFC is an accurate and rapid method to determine significant bacteriuria in urological patients and is superior to dipstick analysis or indirect surrogate parameters such as leukocyturia. When UFC is available, we recommend it to be used for the diagnosis of bacteriuria over findings obtained by dipstick analysis.
DOI: 10.6084/m9.figshare.28264229.v1
title: Data File for: "The Political Economy of Legalized Sports Gaming: Evidence from California's Proposition 26"

description: Data File for: "The Political Economy of Legalized Sports Gaming: Evidence from California's Proposition 26", appearing in Gaming Law Review. DOI: https://doi.org/10.1089/glr2.2024.0037
DOI: 10.6084/m9.figshare.29150357.v1
title: Figure data

description: Investigation of the spatial and spectral characteristics of Cherenkov light emitted during external beam radiation therapy of the larynx to provide insight for the development of image reconstruction algorithms.
DOI: 10.17632/94czd9vvkw
title: 3DTCP

description: A 3D reconstruction pipeline of Chinese painting elements. The dataset contains all the research data. We will continue to update the dataset in the future to ensure the research.
DOI: 10.6084/m9.figshare.23735592.v1
title: data-figshare.csv

description: Dataset.
DOI: 10.6084/m9.figshare.3517169.v1
title: Appendix C. A table showing coefficients of determination (R²) from linear regressions of phylogenetic diversity on species richness for trees and seedlings at time 2, and from linear regressions of change in phylogenetic diversity on change in species richness over time, for northern and southern latitudinal zones, and for ecoregion sections within each zone.

description: A table showing coefficients of determination (R²) from linear regressions of phylogenetic diversity on species richness for trees and seedlings at time 2, and from linear regressions of change in phylogenetic diversity on change in species richness over time, for northern and southern latitudinal zones, and for ecoregion sections within each zone.
DOI: 10.17632/mf2cgph9cy
title: PhysioPain Dataset

description: Pain is considered subjective since it is based on personal experience; however, it may be possible to objectively analyze pain through a self-reporting system supported by bio-signals. Based on this hypothesis, a multimodal dataset is created, combining EEG and wristband signals (including EDA, BVP, temperature, accelerometer data) along with participants' responses to a survey, including the McGill Pain Questionnaire. This dataset, collected from 99 participants, allows for the analysis of three different types of pain: headache, back pain, and menstrual pain. E4 Empatica wristband and Mindwave Mobile 2 EEG device are used to collect the data. Both raw and processed data of the devices with survey answers are stored in the dataset by participants' unique IDs.
DOI: 10.6084/m9.figshare.28596629.v1
title: Data_Development Engagements in Nepal A Comparative Study of India and China.xlsx

description: To achieve middle-income status by 2030 for Nepal, the World Bank Report on Nepal’s Infrastructure Sector Assessment states that annual investments in infrastructure development will be around 10-15% of GDP (on an average of around USD 5.45 billion). The study aims to explore the evolving dynamics of India’s and China’s infrastructure development cooperation with Nepal from 1947 to 2024, focusing on their strategies, motivations, and implications, using the ISOCE framework (Interventions, Strategy, Outcome, Concerns, and Expectations). It examines the impact of infrastructure development initiatives and the contrasting approaches to Nepal’s infrastructure growth and sustainability. The objectives of the study are to assess the strategic motivations and development cooperation policies of India and China and evaluate the outcomes and concerns of the initiatives. The methodology uses archival research, secondary data from government reports, think tank studies and media sources to overcome gaps in official data. The findings show that India's grant-based assistance to Nepal focuses on capacity-building and infrastructure development projects that meet the needs of the local communities. At the same time, China prioritizes large-scale infrastructure projects funded through loans. Both countries have contributed to Nepal’s development despite the challenges, such as debt management and alignment with Nepal’s development priorities. The study concludes that development cooperation is crucial for Nepal's socio-economic growth and regional stability. It emphasises that India should enhance its role as a reliable development partner and neighbour by optimizing its development cooperation strategies to ensure capacity building and equitable and sustainable development in Nepal.
DOI: 10.17632/64z84btr5c
title: Vital signs and intestinal flora in rats

description: The Softron BP-2010 noninvasive rat-tail sphygmomanometer was used, and all rats were acclimated to the noninvasive rat-tail sphygmomanometer for blood pressure (BP) and HR measurement for 1 week. BP and HR were then measured weekly at the same time point using the noninvasive tail-sleeve arterial BP test. This method uses a specialized volume pressure recording sensor, which detects all blood volume changes and is connected by a cuff that is placed over the animal’s tail. Rats needed to be restrained in specific holders and artificially heated to maintain normal BP. The pulse transducer was fixed, and after the subject was quiet, the pulse transducer was turned on. The test was started after the pulse wave appeared and stabilized, with an interval of 2 min between each test. Each rat was measured 3 times, and the average value was taken.
DOI: 10.17632/9hs9mtxhh4
title: NHM-Chem simulation data used for an air quality study in North India

description: NHM-Chem simulation data used for an air quality study in North India. This is a open dataset for a manuscript which is going to be submitted.
DOI: 10.6084/m9.figshare.13171766.v1
title: RB-TnSeq data for Bacteroides thetaiotaomicron VPI-5482

description: This data set includes 523 successful fitness assays for Bacteroides thetaiotaomicron VPI-5482 based on a pool of randomly-barcoded transposon mutants (RB-TnSeq). The data is provided as a gzipped tarball. After unpacking, load index.html into a web browser to get some explanation of all the files.<br>Note added September 10, 2021: After publishing this data, Morgan Price and Adam Deutschbauer discovered that our stock solutions for sucrose and D-mannitol were problematic. In particular, Escherichia coli BW25113 is a K-12 strain (closely related to MG1655) and should not be able to grow on sucrose. In M9 media made with our original stock solution of sucrose, E. coli BW25113 grew, but in media made with a fresh stock solution, it did not. Similarly, growth of E. coli on mannitol should require the phosphotransferase uptake protein mtlA and the dehydrogenase mtlD. In our original fitness assays for E. coli, mtlA and mtlD were not important for growth on mannitol; instead, manX and manY, which encode the mannose phosphotransferase system, were important. When we repeated these experiments with a fresh stock solution for D-mannitol, we found that mtlA and mtlD were important for fitness, and manX and manY were not.<br>Please disregard the data regarding sucrose or D-mannitol. In the Fitness Browser (https://fit.genomics.lbl.gov), the problematic fitness experiments have been removed. As of September 2021, the data for these compounds in the Fitness Browser is from fresh stock solutions of sucrose and D-mannitol. We also checked that the data from these experiments is consistent with prior knowledge of the utilization of these compounds. Finally, we checked the gene re-annotations that were related to these sucrose or mannitol utilization.<br>
DOI: 10.6084/m9.figshare.3568407.v1
title: Appendix G. A bootstrap method to construct an unconditional variance estimator for any interpolated or extrapolated estimator.

description: A bootstrap method to construct an unconditional variance estimator for any interpolated or extrapolated estimator.
DOI: 10.6084/m9.figshare.28390238.v1
title: Pattern-informed energetics: Energy allocation modeling for predicting trait variation and population persistence

description: Ecosystem processes emerge from interactions among environmental conditions, individual behavior, fitness, and population dynamics. Energetics is a key mechanism underlying these linkages, yet energy budget models often lack an empirical basis for how suboptimal energy intake influences energy allocation to fitness-related processes. Here we introduce a <i>Pattern-Informed Energetics</i> (PIE) framework, which leverages diverse knowledge sources to infer key parameters governing vital but elusive energetic mechanisms. Using a rodent case study, we calibrated and evaluated the PIE framework against population dynamics, morphometrics, energetics, and life history patterns, assessing its ability to replicate an empirical experiment and applying it to future climate scenarios. We demonstrate its potential to mechanistically predict how environmental changes shape traits and population dynamics. By linking allocation dynamics to emergent patterns, PIE can enhance the integration of physiological insights into predictive models, advancing our understanding of system responses to environmental change while accounting for species' evolved life histories.
DOI: 10.6084/m9.figshare.29150273.v1
title: The CDC’s management and COVID-19 vaccine recommendations during the COVID-19 pandemic: A healthcare worker’s perspective

description: The CDC’s COVID-19 pandemic guidelines affected everyone, especially healthcare workers (HCWs) due to the high exposure risks, long hours and stress during the pandemic. Thus, understanding HCWs perceptions and acceptance of these guidelines were crucial to patient outcomes. Our goal was to investigate HCWs views on the Centers for Disease Control and Prevention (CDC) management of the COVID-19 pandemic and vaccine recommendations.<b> </b>Data were collected from an online survey of HCWs in Pennsylvania (August 2022 - February 2023). Eligible participants (n=580) aged 21+, reported COVID-19 vaccination status and time of first vaccination.<b> </b>Participants (n=580) were 83% female and 92% White. From our sample, 71% provided direct care, 57% lived in a suburban area, and 85% had received at least one dose of the vaccine. HCWs had mixed perceptions of the CDC's management of the COVID-19 pandemic and vaccine recommendations. Positive perceptions on pandemic management highlighted clear communication, a science-driven approach, and an effective crisis response. Criticisms included overregulation of mask mandates, politicization, and continuously changing policies. Regarding vaccine recommendations, positive perceptions included timely distribution, accessibility, affordability, and clear communication, while criticisms included vaccine mandates, politicization, perceived lack of scientific basis, and inconsistent messaging.<b> </b>Future recommendations for the CDC regarding outbreaks would be hiring communication experts to help ensure framing of communication is free from perceived political bias. The CDC should continue to maintain communication with HCWs and focus on providing evidence-based information during future pandemics.
DOI: 10.6084/m9.figshare.3490754.v2
title: Tests on Thin Reinforced Concrete Walls Subjected to In-plane and Out-of-plane Cyclic Loading - Overview, General folders and TW1 (1/3)

description: The present dataset describes an experimental campaign on five thin T-shaped reinforced concrete walls. The tests aimed at assessing the influence of wall thickness on member stability, the role of lap splices on damage distribution and displacement ductility, and the effects of the simultaneous application of out-of-plane loading on the member response. This link contains the principal data for all five tests. Further data can be downloaded from the links below.<br> If you use the data, please cite: Almeida, J. P., O. Prodan, A. Rosso, and K. Beyer. 2016. Tests on Thin Reinforced Concrete Walls Subjected to in-Plane and out-of-Plane Cyclic Loading. <i>Earthquake Spectra</i>.