cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/z9gfh66mj4.2
title: Instance dataset for resource-constrained project scheduling with diverging material flows

description: This dataset is motivated by the problem of scheduling a project with diverging material flows as presented in [1]. Diverging material flows are released during the execution of the project and are subject to limited processing and storage capacities. Typical examples are nuclear dismantling or other deconstruction/demolition projects, where large amounts of material must be classified, scanned for hazardousness, and processed accordingly. The problem setting is mathematically described as a resource-constrained project scheduling problem with cumulative resources (RCPSP/c). The RCPSP/c deals with finding a project schedule with minimal makespan that satisfies temporal, renewable resource, and cumulative resource constraints.

This dataset is described by the data article [2]. This data article provides details about the naming of the instances and solutions, the instance generation procedure, the heuristic methods used for computing the solutions, and the mathematical problem formulation. 

[1] M. Gehring, R. Volk, F. Schultmann, On the integration of diverging material flows into resource‐constrained project scheduling, Eur J Oper Res 303 (2022) 1071–1087. https://doi.org/10.1016/j.ejor.2022.03.047.
[2] M. Gehring, R. Volk, F. Schultmann, Instance dataset for resource-constrained project scheduling with diverging material flows, Data Brief 48 (2023), Article no: 109279. https://doi.org/10.1016/j.dib.2023.109279.
DOI: 10.17632/t6m9hj4wm8.1
title: Supplemental Figures for "Relaxin Modulates the Genomic Actions and Biological Effects of Estrogen in the Myometrium" by Tripathy et al. (2024)

description: This file contains Supplemental Figures 1-13 for "Relaxin Modulates the Genomic Actions and Biological Effects of Estrogen in the Myometrium" by Tripathy et al. (2024) published in Endocrinology.

Estradiol (E2) and relaxin (Rln) are steroid and polypeptide hormones, respectively, with important roles in the female reproductive tract, including myometrium. Some actions of Rln, which are mediated by its membrane receptor RXFP1, require or are augmented by E2 signaling through its cognate nuclear steroid receptor, estrogen receptor alpha (ER). In contrast, other actions of Rln act in opposition to the effects of E2. Here we explored the molecular and genomic mechanisms that underlie the functional interplay between E2 and Rln in the myometrium. We used both ovariectomized female mice and immortalized human myometrial cells expressing wild-type or mutant ER (hTERT-HM-ER cells). Our results indicate that Rln modulates the genomic actions and biological effects of estrogen in the myometrium and myometrial cells by reducing phosphorylation of ER on serine 118 (S118), as well as by reducing the E2-dependent binding of ER across the genome. These effects were associated with changes in the hormone-regulated transcriptome, including a decrease in the E2-dependent expression of some genes and enhanced expression of others. The inhibitory effects of Rln cotreatment on the E2-dependent phosphorylation of ER required the nuclear dual-specificity phosphatases DUSP1 and DUSP5. Moreover, the inhibitory effects of Rln were reflected in a concomitant inhibition of the E2-dependent contraction of myometrial cells. Collectively, our results identify a pathway that integrates Rln/RXFP1 and E2/ER signaling, resulting in a convergence of membrane and nuclear signaling pathways to control genomic and biological outcomes.

KEYWORDS
Estrogen, estradiol, relaxin, dual-specificity phosphatase, myometrium, estrogen receptor, relaxin receptor, contraction.

ABBREVIATIONS
E2, estradiol; Rln, relaxin; RXFP1, relaxin family peptide receptor 1 (relaxin receptor); DUSP, dual-specificity phosphatase; ChIP, chromatin immunoprecipitation; RT-qPCR, reverse transcription-quantitative PCR.
DOI: 10.15468/dl.fu2rmf
title: Occurrence Download

description: A dataset containing 593102 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-77.0584 38.93273, -77.03414 38.93273, -77.03414 38.99119, -77.0584 38.99119, -77.0584 38.93273))"
 ]
}

 The dataset includes 593102 records from 115 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073072-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/rmj7fwm6n7.3
title: Protein-Folding Chaperones Predict Structure-Function Relationships and Cancer Risk in BRCA1 Mutation Carriers

description: We used a high-throughput LUMIER assay to test whether the binding patterns of protein-folding chaperones can be used to predict structure-function relationships of BRCA1 variants and the clinical manifestations of BRCA1 mutations in carriers. Our findings are presented in the following tables.
Table S1. Chaperone binding detects BRCA1-BRCT pathogenic ClinVar variants and rationally designed variants that disrupt domain structure
Table S2. Computational analysis of thermodynamic stability for pathogenic BRCA1-BRCT missense mutations in ClinVar
Table S3. Diverse functional outcomes of BRCA1-BRCT variants detected by chaperone binding
Table S4. Features of human hypomorphic BRCA1 variants characterized by chaperones
Table S5. Human BRCA1 carriers exhibiting early disease onset identified by chaperone binding
DOI: 10.17632/zzgfhbvzg4.1
title: Dried blood spot acylcarnitines from selective screening for detection of Carnitine-acylcarnitine Translocase (CACT) deficiency and Carnitine palmitoyl transferase 2 (CPT2) deficiency by electrospray tandem mass spectrometry.

description: The dataset was generated from analysis of acylcarnitines in the 17,121 dried blood spots using tandem mass spectrometry operated with electrospray in positive ion mode. Precursor ion scan of m/z 85 was used for all acylcarnitines and quantification of each analyte was obtained using the signal intensity ratio of the compound to its internal standard. The acylcarnitines analyzed included C0, C2, C3, C3DC, C4, C5, C5:1, C5DC, C5OH, C6, C8, C10, C12, C14, C16, C18, C18:1, C16OH, C18OH and C18:1OH. The data was analyzed using Neolynx V4.0 software. The data analysis was obtained from measurement of acylcarnitines from symptomatic Malaysian patients less than fifty years old who exhibiting symptoms suggestive of inborn errors of metabolism, but had normal acylcarnitine profile. These data on the acylcarnitines derived from the dried blood spot (DBS) and their respective calculated acylcarnitine ratios has been used in patients with clinically suspected long chain fatty acid oxidation disorders, Carnitine-acylcarnitine Translocase (CACT) deficiency and carnitine palmitoyl transferase 2 (CPT2) deficiency. In our patient population, the 99th percentile was used as the cut-offs to detect the disease. The individual acylcarnitines and the relevant acylcarnitine ratios and spectrums of normal and positive patients with Carnitine-acylcarnitine Translocase (CACT) deficiency and carnitine palmitoyl transferase 2 (CPT2) deficiency generated from analysis by tandem mass spectrometry are provided as attached files.
DOI: 10.17632/hytnj2xhy4.1
title: plant growth promotion_2023

description: Four different wettable powder bioformulations developed for endophytic Aspergillus sp. and Penicillium sp. isolates, were evaluated for efficacy enhancement of cucumber seedlings in greenhouse.
Theses datasets include raw data used for statistical analysis and, artwork created by GraphPad Prism v8 and a couple of pictures from the carried out experiments.
DOI: 10.17632/9nhj79g4fc.1
title: Benthic functionality under climate-induced environment changes offshore on the Antarctic Peninsula continental shelf

description: In 2017 deep-water benthic assemblages across a continental shelf trough in outer Marguerite Bay, West Antarctic Peninsula (WAP) were sampled by mean of seabed video recording. Video and images of the seabed were captured at 5 stations, each with 20 replicates. The images were analysed and epifauna were identified and classified into 13 functional groups based on mobility and feeding mechanisms of organisms. Study also collected coincident environmental information on depth, temperature, salinity, oxygen and chlorophyll-a (using a CTD). Climax sessile suspension feeders were the most spatially dominant group. ST5, the shallowest station was functionally contrasting with other stations. This functional difference was also influenced by hard substrata of ST5, which is typically preferred by climax sessile suspension feeders.
DOI: 10.17632/n2c3pf4yn2.1
title: LINF_260025100

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/r2wffrdp27.1
title: temporal discounting in HIV

description: Database that includes the results of the application of the Montreal Cognitive Assessment (MoCA); Drug Abuse Questionnaire (CAD-20; Villalobos-Gallegos et al., 2015), CD4 biomarker and time discount task for money and health in a sample of people living with HIV. In the present research, we intend to evaluate the relationship between the biological markers of HIV and some behavioral measures related to the choice behavior. the objective of this study is to evaluate the differential effect of efavirenz or a history of methamphetamine use on the parameters of temporal discount for money and health, in a sample of people living with HIV. A total of 61 people living with HIV, from the city of Tijuana, Mexico, were evaluated, of whom 26 had a history of receiving treatment with Efavirenz, and 41 had a history of methamphetamine use. The database corresponds to the direct values ​​obtained from the applications of the instruments.
DOI: 10.17632/x3v4kynk6d.1
title: LDHU3_16.2060

description: snoRNA binding domain containing protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/xr38s95sm9.1
title: FusionCalibDatasets_test

description: This is one of the experimental data of the FusionCalib method of single-node calibration for roadside integrated radar camera fusion sensor. It includes:
1. Raw data: output.avi (from monocular camera); radarTrack.npy (from 4D millimeter-wave radar); lidarPcl.npy (from 16-line LiDAR).
2. Config file: config
3. Vehicle bottom detections: output-bottom.npy
4. Vehicle bottom pixel trajectories: output-ByteTrack.npy
5. All 3D positions of vehicle bottom: PlanePoint.npy
6. Calibration results: res

You can read .npy files using python code:
``
import numpy as np
data=np.load('.npy',allow_pickle=True)
``
Other files are for the compared method described in our paper.
DOI: 10.17632/z4rgfg2ff9.3
title: Dataset on Removal of Trimethoprim using UV/persulfate and UV/sulfite systems: Optimization by Response Surface Methodology

description: Using response surface methodology for the optimization of UV/persulfate and UV/sulfite system on the removal of Trimethoprim
DOI: 10.17632/z4rgfg2ff9.1
title: Dataset on Degradation of Trimethoprim (Antibiotic) Using Persulfate-Based Advanced Oxidation and Sulfite-Based Advanced Reduction Processes: Optimization by Response Surface Methodology

description: Using response surface methodology for the optimization of UV/persulfate and UV/sulfite system on the degradation of Trimethoprim
DOI: 10.17632/52xcxs29r6.1
title: Redox capacity of soil dissolved organic matter with different molecular weight: Roles of aromaticity and organic sulfur

description: Our data describe the differences in molecular composition of different molecular weights and the factors that regulate the redox properties of DOM with different molecular weights.
DOI: 10.17632/zt5zngr4zv.1
title: Supplements for “Risk of alopecia areata after COVID-19 infection: A Nationwide population-based cohort study”

description: Supplementary information for Risk of alopecia areata after COVID-19 infection: A Nationwide population-based cohort study
DOI: 10.25810/rxtv-eb29.81
title: German Newspaper Coverage of Climate Change or Global Warming, 2004-2024 - December 2024

description: The Media and Climate Change Observatory Data monitors 126 sources (across newspapers, radio and TV) in 58 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.5517/ccdc.csd.cc2g45d6
title: CCDC 2268127: Experimental Crystal Structure Determination

description: Related Article: Michael L. Tarlton, Thomas D. Persinger, Nicole M. Byrne, Tyra C. Douglas, Andrey Yakovenko, Richard E. Wilson|2023|Inorg.Chem.|62|16770|doi:10.1021/acs.inorgchem.3c02081
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/x6b72k59xn.1
title: Temperature Dependent Dynamic Response of High-Density Polyurethane Foams

description: This data corresponds to work done by Daniel Morrison for a Master of Science degree at the Colorado School of Mines, focused on understanding temperature and time dependencies, and understanding microstructure damage on open-cell, polyurethane foams.
DOI: 10.5517/ccdc.csd.cc2g45rk
title: CCDC 2268138: Experimental Crystal Structure Determination

description: Related Article: Michael L. Tarlton, Thomas D. Persinger, Nicole M. Byrne, Tyra C. Douglas, Andrey Yakovenko, Richard E. Wilson|2023|Inorg.Chem.|62|16770|doi:10.1021/acs.inorgchem.3c02081
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/k5dm2x57hw.1
title: Data and R code used to study the effects of cattle and cervids on plants and pollinators on young spruce plantations in boreal forest

description: The data was collected in Norway in 2021 and 2022 to study the effects of cattle and cervids on plants and flower-visiting insects in young spruce plantations. We compared data from inside to outside the grazing area.
The plot key file containes data on our sampling plots, such as plotID, coordinates, study area, graing area (inside/outside), fenced (yes/no) and forest productivity ("bonitet").
The sward data files contain sward height of graminoids, herbs and woody plants in the field layer vegetation.
The plant data files contain plant abundance on species level of graminoids, herbs and woody plants in the field layer vegetation.
The flower data files contain flower abundance on species level of herbs and woody plants in the field layer vegetation.
The flower visitors data file contains abundance of bumblebees, hoverflies, other flies, butterflies, honeybees, solitary bees and other insects.
The bumblebee and hoverfly data files contain species identifications of all caught bumblebees and hoverflies.
In the sward height script we modelled sward height in relation to fencing (fenced/unfenced) and grazing area (inside/ outside). 
In the plant abundance script we modelled the abundance of graminoids, herbs and woody plants in the field layer vegetation in relation to fencing (fenced/unfenced) and grazing area (inside/ outside). 
In the plant species richness script we modelled the species richness of graminoids, herbs and woody plants in the field layer vegetation in relation to fencing (fenced/unfenced) and grazing area (inside/ outside). 
In the flower abundance script we modelled the abundance of flowers on herbs and woody plants in the field layer vegetation in relation to fencing (fenced/unfenced) and grazing area (inside/ outside). 
In the flower species richness script we modelled the species richness of flower carrying herbs and woody plants in the field layer vegetation in relation to fencing (fenced/unfenced) and grazing area (inside/ outside). 
In the insect abundance script we modelled the abundance of flower visiting insects in relation to fencing (fenced/unfenced) and grazing area (inside/ outside). 
In the insect species richness script we modelled the species richness of bumblebees and hoverflies in relation to fencing (fenced/unfenced) and grazing area (inside/ outside).
DOI: 10.5517/ccdc.csd.cc2g45sl
title: CCDC 2268139: Experimental Crystal Structure Determination

description: Related Article: Michael L. Tarlton, Thomas D. Persinger, Nicole M. Byrne, Tyra C. Douglas, Andrey Yakovenko, Richard E. Wilson|2023|Inorg.Chem.|62|16770|doi:10.1021/acs.inorgchem.3c02081
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g45tm
title: CCDC 2268140: Experimental Crystal Structure Determination

description: Related Article: Michael L. Tarlton, Thomas D. Persinger, Nicole M. Byrne, Tyra C. Douglas, Andrey Yakovenko, Richard E. Wilson|2023|Inorg.Chem.|62|16770|doi:10.1021/acs.inorgchem.3c02081
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/zytwnm87j9.1
title: LDHU3_15.0570

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.5517/ccdc.csd.cc2g45vn
title: CCDC 2268141: Experimental Crystal Structure Determination

description: Related Article: Michael L. Tarlton, Thomas D. Persinger, Nicole M. Byrne, Tyra C. Douglas, Andrey Yakovenko, Richard E. Wilson|2023|Inorg.Chem.|62|16770|doi:10.1021/acs.inorgchem.3c02081
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g45wp
title: CCDC 2268142: Experimental Crystal Structure Determination

description: Related Article: Michael L. Tarlton, Thomas D. Persinger, Nicole M. Byrne, Tyra C. Douglas, Andrey Yakovenko, Richard E. Wilson|2023|Inorg.Chem.|62|16770|doi:10.1021/acs.inorgchem.3c02081
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/6y7v84g2f7.1
title: Social Networks, Use of Communication Technology, and Loneliness of Frail Older People Ageing in Place in Italy: The Impact of COVID-19 Pandemic

description: Data come from the follow-up of the main study “Inclusive ageing in place” (IN-AGE), regarding frail older people aged 65 years and over (males and females). The main study was a cross-sectional qualitative survey carried out in 2019 by face-to-face interviews to frail older people without cognitive impairment, and living at home, alone or with a private personal care assistant (PCA), in three Italian Regions: Lombardy (North), Marche (Centre) and Calabria (South). Both peripheral/degraded areas of urban sites and fragile rural locations were included, with regard to social and material vulnerability aspects (e.g. high presence of frail older people living alone, poor provision of services). The follow up was carried out in July-September 2020, and it was aimed to explore and compare effects of lockdown, due to the first wave of the COVID-19 pandemic (February-May 2020), on frail older people living alone at home in Brescia and Ancona, two urban cities located respectively in the Northern and Central Italy. This country was the Western epicenter of the first wave of the pandemic, that differently affected the two cities as for infections, with a more severe impact on the former one. 
The dataset (41 respondents, vs 48 in the main survey) regards available social networks (family, friends, neighbors), use of communication technology (mobile, smartphone, PC/tablet), and perceived loneliness. Also, fears due to the pandemic were reported. A semi-structured interview was administered by telephone due to social distancing imposed by the pandemic. Participants were asked to report and motivate possible changes due to the pandemic. A simple quantitative analysis (frequency distribution/bivariate analysis) of closed responses was carried out by using Microsoft Excel software 2019. 
Findings showed that seniors increased mainly telephone (TEL) contacts especially in Ancona. In both cities fears for the infection emerged too, and mainly in Ancona than Brescia several cases of worsened perceived loneliness were detected. Despite the exploratory nature of the study, with a not-representative (small) sample of the target population, and notwithstanding some differences among cities, findings stressed the risk of isolation and loneliness of seniors living alone. This risk was buffered by the use of communication technology during the lockdown, but more interventions allowing a sustainable healthy ageing (HA) in place, enhancing healthy behaviors especially in emergency situations, are needed.
The dataset is provided in open format (xlsx) and includes the following: a “numeric” dataset regarding the unlabeled dimensions used for statistics elaboration; a codebook with both the complete variables list and variables labels we used.
The dataset was produced within the framework of the IN-AGE project, funded by Fondazione Cariplo, Grant N. 2017-0941.
DOI: 10.5517/ccdc.csd.cc2g45xq
title: CCDC 2268143: Experimental Crystal Structure Determination

description: Related Article: Michael L. Tarlton, Thomas D. Persinger, Nicole M. Byrne, Tyra C. Douglas, Andrey Yakovenko, Richard E. Wilson|2023|Inorg.Chem.|62|16770|doi:10.1021/acs.inorgchem.3c02081
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g45yr
title: CCDC 2268144: Experimental Crystal Structure Determination

description: Related Article: Michael L. Tarlton, Thomas D. Persinger, Nicole M. Byrne, Tyra C. Douglas, Andrey Yakovenko, Richard E. Wilson|2023|Inorg.Chem.|62|16770|doi:10.1021/acs.inorgchem.3c02081
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.