cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3646655_d3
title: Additional file 8: Table S5. of A unified analytic framework for prioritization of non-coding variants of uncertain significance in heritable breast and ovarian cancer

description: Variants Predicted by IT to Affect SRFBSs (XLSX 30Â kb)
DOI: 10.6084/m9.figshare.c.3646655_d2
title: Additional file 7: Table S4. of A unified analytic framework for prioritization of non-coding variants of uncertain significance in heritable breast and ovarian cancer

description: Variants identified within natural donor or acceptor splice sites (XLSX 14Â kb)
DOI: 10.6084/m9.figshare.c.3646655_d5
title: Additional file 3: Table S1. of A unified analytic framework for prioritization of non-coding variants of uncertain significance in heritable breast and ovarian cancer

description: TFs For Which Information Weight Matrices Were Built And Factorâ  s Role in Transcription (XLSX 17Â kb)
DOI: 10.6084/m9.figshare.c.3648908_d1
title: Additional file 1: of The Interaction Network Ontology-supported modeling and mining of complex interactions represented with multiple keywords in biomedical literature

description: Interaction keywords and INO type annotations for the LLL data set. This additional file includes annotations of the LLL dataset with INO multiple keyword interaction types. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.c.3648929_d1
title: MOESM4 of Copy number variability of expression plasmids determined by cell sorting and Droplet Digital PCR

description: Additional file 4. This spreadsheet file contains the Droplet Digital PCR dataset presented in this study.
DOI: 10.6084/m9.figshare.c.3648917_d2
title: Additional file 2: Table S1. of Circulating cell-free DNA-based epigenetic assay can detect early breast cancer

description: Characteristics of cell lines used in this study. Table S2. Characteristics of FFPE samples used in methylation array analysis. Table S3. Characteristics of healthy volunteers in methylation array analysis. Table S4. Primer/probe set designed for methylation markers. Table S5. Sequence of primer/probe sets for methylation markers. Table S6. Sequence of primer/probe sets of internal control markers. Table S7. Clinical data of cfDNA samples and results of ddMSP analysis. Table S8. Sensitivity and specificity of the best SVM model. Table S9. Correlation between age and each marker/parameter. Table S10. Summary of recent epigenetic studies regarding cfDNA for BC. Table S11. Upper and lower cutoff threshold of positive droplets. Table S12. Cutoffs of marker concentration to categorize into marker-positive/negative groups. Table S13. P values of statistical tests in the validation analysis using public datasets. (XLSX 172 kb)
DOI: 10.6084/m9.figshare.c.3648926_d2
title: Additional File 1: Table S1.

description: Normalized full metabolic dataset. Table S2. Seed weight in response to salinity for both seasons. Table S3. Putative QTLs for maturation percent. Table S4. Putative QTLs for RMC in SDF. Table S5. Putative QTLs for RMC in SDS. (XLSX 882 kb)
DOI: 10.6084/m9.figshare.c.3648929_d2
title: MOESM2 of Copy number variability of expression plasmids determined by cell sorting and Droplet Digital PCR

description: Additional file 2. This spreadsheet file contains the recommended minimal information for digital PCR experiments.
DOI: 10.6084/m9.figshare.c.3648941_d1
title: Additional file 1: of National Influenza Surveillance in the Philippines from 2006 to 2012: seasonality and circulating strains

description: Data on influenza positivity rates from 2006 to 2011, National Influenza Surveillance Philippines and computation of average epidemic curve and alert threshold. (XLSX 52 kb)
DOI: 10.6084/m9.figshare.c.3651722_d1
title: Additional file 1: Table S1. of A compendium of human genes regulating feeding behavior and body weight, its functional characterization and identification of GWAS genes involved in brain-specific PPI network

description: Human genes (105) controlling feeding behavior that were collected from scientific publications (research papers and review articles); Table S2. Human genes (336) controlling feeding behavior or body weight that were collected from OMIM; Table S3. Human genes (37) associated with syndromes that include obesity as one of the phenotypic characteristics (Bardet-Biedl, Prader-Willi, Alstrom, etc); Table S4. Data from the GWAS meta-analysis papers. Lead SNPs with genome-wide significant (p-value
DOI: 10.6084/m9.figshare.c.3651719_d2
title: Additional file 2: of Sacral agenesis: a pilot whole exome sequencing and copy number study

description: All called variants after QC and MAF. (XLSX 1329Â kb)
DOI: 10.6084/m9.figshare.c.3651740_d1
title: Additional file 1: of The gene-expression profile of renal medulla in ISIAH rats with inherited stress-induced arterial hypertension

description: Genes differentially expressed in renal medulla of hypertensive ISIAH and normotensive control WAG rats. (XLS 197 kb)
DOI: 10.6084/m9.figshare.c.3651734_d2
title: Additional file 2: Table S1. of Haploid yeast cells undergo a reversible phenotypic switch associated with chromosome II copy number

description: Expression values for all genes in an Ispâ   isolate (m2) relative to an Isp+ one (p2) and mean coverage in approximately 1kb-long windows for an Ispâ   isolate (m2) relative to an Isp+ one (p3). Genes/windows are sorted by chromosomal position. Genes or windows located on duplicated chromosomes are in bold. (XLS 1215 kb)
DOI: 10.6084/m9.figshare.c.3651728_d2
title: Additional file 2: of Genes of susceptibility to early neurodegenerative changes in the rat retina and brain: analysis by means of congenic strains

description: Contains the lists of RNO1 genes which are located within examined regions of rat chromosome 1 (Additional file 2: Tables S1, S2, S3, S4 and S5) (XLSX 349Â kb)
DOI: 10.6084/m9.figshare.c.3651740_d2
title: Additional file 6: of The gene-expression profile of renal medulla in ISIAH rats with inherited stress-induced arterial hypertension

description: Metabolic pathways enriched with genes differentially expressed in ISIAH and WAG renal medulla. (XLS 41 kb)
DOI: 10.6084/m9.figshare.c.3651752_d1
title: Additional file 1: of ESAP plus: a web-based server for EST-SSR marker development

description: Supplementary materials. Lists of in-house Shell script in ESAP Plus. Nine in-house Shell scripts including: (1) est1_formatting.sh, (2) est2_length_N.sh, (3) est3_vector.sh, (4) est4_lowcom.sh, (5) est5_est_clustering_cdhitest.sh, (6) est5_est_clustering_tgicl.sh, (7) est6_ssr_misa.sh, (8) est6_ssr_repeatmasker.sh, and (9) est7_primer.sh. Format: The above shell scripts were compressed in one zip file. (ZIP 10Â kb)
DOI: 10.6084/m9.figshare.c.3651734_d3
title: Additional file 4: Table S2. of Haploid yeast cells undergo a reversible phenotypic switch associated with chromosome II copy number

description: Raw aCGH data for each isolate tested. (XLS 3589 kb)
DOI: 10.6084/m9.figshare.c.3651728_d3
title: Additional file 3: of Genes of susceptibility to early neurodegenerative changes in the rat retina and brain: analysis by means of congenic strains

description: Contains DAVID results for the set of separately analyzed 1498 genes (XLSX 156Â kb)
DOI: 10.6084/m9.figshare.c.3651740_d3
title: Additional file 4: of The gene-expression profile of renal medulla in ISIAH rats with inherited stress-induced arterial hypertension

description: Functional annotation of differentially expressed genes (DEGs) found in 3-month old ISIAH and WAG renal medulla. (XLS 95 kb)
DOI: 10.6084/m9.figshare.26503156.v1
title: Nitrate removal from aqueous solution using fuller’s earth and modified fuller’s earth

description: Water, a vital resource for ecosystems and human populations, is facing increasing nitrate contamination due to agricultural runoff, industrial discharge and improper waste disposal. The present study focuses on the efficacy of nitrate removal through adsorption using fuller’s earth (FE) and modified fuller’s earth (acid-treated) (MFE) as adsorbents. The impact of initial pH (2.0–7.0), contact time (5–240 min), adsorbent dosage (1–30 g/L), initial nitrate concentration (50–250 mg/L) and temperature (30–50°C) on nitrate removal using fuller’s earth were studied. The maximum nitrate removal was observed at pH 2.0, and equilibrium was reached in 120 min at 30℃. The Freundlich isotherm best fit the equilibrium data. The maximum nitrate uptake of fuller’s earth and modified fuller’s earth were 84.75 mg/g and 85.47 mg/g, respectively. Nitrate removal by FE and MFE followed a second-order kinetic equation. Thermodynamic studies showed spontaneity and the exothermic nature of the nitrate adsorption process. ∆H° values were −44.96 and −42.63 kJmol<sup>−1</sup> for FE and MFE and ΔS° was −85.11 and −74.52 Jk<sup>−1</sup>mol<sup>−1</sup> for FE and MFE, respectively. FE, known for its exceptional adsorption capacity owing to its porous structure and high ion-exchange capacity, has demonstrated a remarkable affinity for nitrate ions in batch studies.
DOI: 10.6084/m9.figshare.26503156
title: Nitrate removal from aqueous solution using fuller’s earth and modified fuller’s earth

description: Water, a vital resource for ecosystems and human populations, is facing increasing nitrate contamination due to agricultural runoff, industrial discharge and improper waste disposal. The present study focuses on the efficacy of nitrate removal through adsorption using fuller’s earth (FE) and modified fuller’s earth (acid-treated) (MFE) as adsorbents. The impact of initial pH (2.0–7.0), contact time (5–240 min), adsorbent dosage (1–30 g/L), initial nitrate concentration (50–250 mg/L) and temperature (30–50°C) on nitrate removal using fuller’s earth were studied. The maximum nitrate removal was observed at pH 2.0, and equilibrium was reached in 120 min at 30℃. The Freundlich isotherm best fit the equilibrium data. The maximum nitrate uptake of fuller’s earth and modified fuller’s earth were 84.75 mg/g and 85.47 mg/g, respectively. Nitrate removal by FE and MFE followed a second-order kinetic equation. Thermodynamic studies showed spontaneity and the exothermic nature of the nitrate adsorption process. ∆H° values were −44.96 and −42.63 kJmol<sup>−1</sup> for FE and MFE and ΔS° was −85.11 and −74.52 Jk<sup>−1</sup>mol<sup>−1</sup> for FE and MFE, respectively. FE, known for its exceptional adsorption capacity owing to its porous structure and high ion-exchange capacity, has demonstrated a remarkable affinity for nitrate ions in batch studies.
DOI: 10.6084/m9.figshare.27324195.v1
title: Cheese whey generation, management and potential for biogas production in Mexico and the State of Jalisco

description: Pollution of water bodies and process upset in treatment plants in Mexico by cheese whey discharges is a matter of concern where scant inspection and law enforcement may aggravate the situation. This study analyzes the current state of environmental regulatory compliance and the impacts of whey discharges with particular emphasis on the country’s leading dairy-producing state, Jalisco. Subsequently, cheese whey characteristics and current valorisation volume and uses are discussed in detail. From there, anaerobic digestion is presented as a key technology for cheese whey treatment mainly to comply with wastewater regulations, with recovery of biogas as bonus. From there, the volume of cheese whey discharged to the environment and potential equivalence in biogas and electricity production is calculated considering both the technologies commonly used in industrial applications and for farms and small producers. Also, the potential electricity generation and prevented atmospheric impact are calculated and framed against the current Mexican energy and emissions inventory. Finally, a review of past efforts to disseminate the use of anaerobic digesters to produce biogas from organic waste in Mexico is undertaken, followed by a discussion of the basic requirements for a strategy to sustainably manage and treat whey discharges.
DOI: 10.6084/m9.figshare.c.3651818_d4
title: Additional file 4: of A fast exact sequential algorithm for the partial digest problem

description: Supplementary data. Calculation of the Standard Error of Mean (SEM), Coefficient of Variation (CV), and Wilcoxon Signed-Rank test for the memory. Tables S15-S19. in Sheet 1 and 2, represent the calculation of SEM and CV for the memory consumption of BBd, BBb, and BBb2 algorithms in case of random data and Zhang data respectively. Tables S20–S22. in Sheet 3, represents the Wilcoxon Signed-Rank test between BBd and BBb algorithms for the memory consumption of Random and Zhang data. Tables S23–S25. in Sheet 4, represent the Wilcoxon Signed-Rank test between BBb and BBb2 algorithms for the memory consumption of Random and Zhang data. Tables S26-S28. in Sheet 5, represent the Wilcoxon Signed-Rank test between BBd and BBb2 algorithms for the memory consumption of Random and Zhang data. (XLS 167 kb)
DOI: 10.6084/m9.figshare.c.3652385_d1
title: Additional file 3 of Prioritizing biological pathways by recognizing context in time-series gene expression data

description: Ranked list of pathways resulted from TRAP and ContextTRAP. It provided ranking information of whole pathways in TRAP and ContextTRAP. It is mentioned in section Biological perspective with part of pathways whose ranks went up in ContextTRAP. (XLS 71 kb)
DOI: 10.6084/m9.figshare.c.3652385_d2
title: Additional file 2 of Prioritizing biological pathways by recognizing context in time-series gene expression data

description: Pathway list selected as relevant pathways. It provides list of pathways relevant to each dataset which are selected by DAVID using validated gene sets mentioned in section Data processing and given in Additional file 1. (XLS 29 kb)
DOI: 10.6084/m9.figshare.c.3652400_d1
title: Additional file 1 of Clustering and evolutionary analysis of small RNAs identify regulatory siRNA clusters induced under drought stress in rice

description: The GO (Gene Ontology) enrichment results of genes with siRNA targeting sites. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3652385_d3
title: Additional file 1 of Prioritizing biological pathways by recognizing context in time-series gene expression data

description: Criteria of gene selection and selected gene set. It provides how to select the gene sets to find relevant pathways from each dataset and the result of selection mentioned in section Data processing. (XLS 49 kb)
DOI: 10.6084/m9.figshare.c.3652400_d2
title: Additional file 2 of Clustering and evolutionary analysis of small RNAs identify regulatory siRNA clusters induced under drought stress in rice

description: The detected motif sequences in siRNA clusters located in intronic regions. (XLSX 98 kb)
DOI: 10.6084/m9.figshare.c.3652436_d1
title: Additional file 1 of Gene-microRNA network module analysis for ovarian cancer

description: The identified modules. We listed all the 46 modules identified with our proposed method. Each module includes both genes and microRNAs. (CSV 51 kb)
DOI: 10.6084/m9.figshare.c.3652439_d1
title: Additional file 1 of Dynamic epigenetic mode analysis using spatial temporal clustering

description: The detailed information of identified spatial temporal clusters. Details for the spatial temporal clusters, represented as triples (, , ). Each cluster lists the genomic regions with the co-occupied epigenetic modifications, which exhibit little variation at different cell types during the differentiation process. (TXT 3962 kb)
DOI: 10.6084/m9.figshare.c.3653972_d4
title: Additional file 6: of Molecular determinants of the adrenal gland functioning related to stress-sensitive hypertension in ISIAH rats

description: Differentially expressed genes (DEGs) in GO term groups, which might be important for the development of the stress-sensitive hypertension in ISIAH rats. (XLS 303 kb)
DOI: 10.6084/m9.figshare.c.3653924_d13
title: Additional file 2: of Comprehensive analysis of draft genomes of two closely related pseudomonas syringae phylogroup 2b strains infecting mono- and dicotyledon host plants

description: List of Pseudomonas syringae strains selected for phylogenetic analysis (XLSX 57 kb)
DOI: 10.6084/m9.figshare.c.3653963_d6
title: Additional file 4: of Evolution of mitochondrial genomes in Baikalian amphipods

description: Summary of codon usage in protein coding genes of mitochondrial genomes of studied Baikalian amphipods. Bold notations indicate species with incomplete protein coding sequences. Sign â  #â   indicates total number of certain codon in protein-coding sequences of every species; â  %â   indicates percent of certain codon in total coding sequence in every species. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.c.3653963_d7
title: Additional file 3: of Evolution of mitochondrial genomes in Baikalian amphipods

description: Organization of the mitochondrial genomes of Baikalian amphipods under study. The incomplete stop codons are labeled in the tables with parentheses. (XLSX 28 kb)
DOI: 10.6084/m9.figshare.c.3653972_d6
title: Additional file 4: of Molecular determinants of the adrenal gland functioning related to stress-sensitive hypertension in ISIAH rats

description: Functional annotation of differentially expressed genes (DEGs) found in 3-month old ISIAH and WAG adrenal glands. (XLS 148 kb)
DOI: 10.6084/m9.figshare.c.3653972_d8
title: Additional file 7: of Molecular determinants of the adrenal gland functioning related to stress-sensitive hypertension in ISIAH rats

description: KEGG metabolic pathways enriched with genes differentially expressed in 3-month old ISIAH and WAG adrenal glands. (XLS 52 kb)
DOI: 10.6084/m9.figshare.c.3653972_d9
title: Additional file 9: of Molecular determinants of the adrenal gland functioning related to stress-sensitive hypertension in ISIAH rats

description: The summary statistics for the sequenced libraries. (XLS 14 kb)
DOI: 10.3886/e207725v1-161521
title: Multicenter Acute Ischemic Stroke, MRI and Clinical Text Dataset

description: 随着全球中风风险的增加，对中风临床症状和临床决策的研究已成为尤其有必要。高质量、大规模、足够丰富的临床文本数据是开展临床文本研究的基础。中风。我们收集了 5788 名急性缺血性中风患者的多模态 MRI 数据集，据我们所知，这是最大的中风数据集，包含详细和完整的临床文本数据。该数据集的发布对于促进旨在实现分析方法多样化的人工智能模型的发展。这些模型探索一系列目前依赖人类的可学习的标准化或重复性任务，包括与疾病相关的评分计算，如 Aspect 评分、预后预测、治疗方案选择、病变标记和病变分割。
DOI: 10.3886/e207725v1-161522
title: Multicenter Acute Ischemic Stroke, MRI and Clinical Text Dataset

description: 随着全球中风风险的增加，对中风临床症状和临床决策的研究已成为尤其有必要。高质量、大规模、足够丰富的临床文本数据是开展临床文本研究的基础。中风。我们收集了 5788 名急性缺血性中风患者的多模态 MRI 数据集，据我们所知，这是最大的中风数据集，包含详细和完整的临床文本数据。该数据集的发布对于促进旨在实现分析方法多样化的人工智能模型的发展。这些模型探索一系列目前依赖人类的可学习的标准化或重复性任务，包括与疾病相关的评分计算，如 Aspect 评分、预后预测、治疗方案选择、病变标记和病变分割。
DOI: 10.5281/zenodo.14462540
title: AI in Ticket Booking Application Enhancing Convenience, Efficiency, and User Trust

description: Dataset
DOI: 10.5281/zenodo.14462541
title: AI in Ticket Booking Application Enhancing Convenience, Efficiency, and User Trust

description: Dataset
DOI: 10.15468/dl.r336ew
title: Occurrence Download

description: A dataset containing 708150 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phasianus colchicus Linnaeus, 1758)",
 "Year is not null",
 "BasisOfRecord is Human Observation",
 "Country is one of (United States of America)"
 ]
}

 The dataset includes 708150 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034140-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m2mdg2
title: Occurrence Download

description: A dataset containing 924 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Kitagawia praeruptora (Dunn) Pimenov"
 ]
}

 The dataset includes 924 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034141-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4rntq6
title: Occurrence Download

description: A dataset containing 2313 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cynoglossum lanceolatum Forssk."
 ]
}

 The dataset includes 2313 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034142-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vyw3yt
title: Occurrence Download

description: A dataset containing 523675 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2024-10-18",
 "EventDate is less than or equal to 2024-11-17",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 523675 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034139-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14435618
title: Codes and dataset for "Subsurface Ocean Turbulent Mixing Enhances Central Pacific ENSO as Positive Feedback"

description: Collection of codes and data used for results of Nature Communications submission "Subsurface Ocean Turbulent Mixing Enhances Central Pacific ENSO as Positive Feedback" by Chuanyu Liu, Fan Wang, Armin Köhl, Xiaowei Wang, Chunzai Wang, and Kelvin J. Richards.
DOI: 10.5281/zenodo.14435617
title: Codes and dataset for "Subsurface Ocean Turbulent Mixing Enhances Central Pacific ENSO as Positive Feedback"

description: Collection of codes and data used for results of Nature Communications submission "Subsurface Ocean Turbulent Mixing Enhances Central Pacific ENSO as Positive Feedback" by Chuanyu Liu, Fan Wang, Armin Köhl, Xiaowei Wang, Chunzai Wang, and Kelvin J. Richards.
DOI: 10.5281/zenodo.14462699
title: Codes and dataset for "Subsurface Ocean Turbulent Mixing Enhances Central Pacific ENSO as Positive Feedback"

description: Collection of codes and data used for results of Nature Communications submission "Subsurface Ocean Turbulent Mixing Enhances Central Pacific ENSO as Positive Feedback" by Chuanyu Liu, Fan Wang, Armin Köhl, Xiaowei Wang, Chunzai Wang, and Kelvin J. Richards.
DOI: 10.15468/dl.gm922b
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Fritillaria thunbergii Miq."
 ]
}

 The dataset includes 22 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034145-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14462915
title: Understanding Digital Shoppers: How TikTok Shop Elevates E-Commerce Experiences
DOI: 10.5281/zenodo.14462916
title: Understanding Digital Shoppers: How TikTok Shop Elevates E-Commerce Experiences