cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c5tt9n
title: MassIVE MSV000085847 - Microbe-metabolite associations linked to the rebounding murine gut microbiome post-colonization with vancomycin resistant Enterococcus faecium
title: Vancomycin resistant Enterococcus faecium (VREfm) is an emerging antibiotic resistant pathogen. Strain-level investigations are beginning to reveal the molecular mechanisms used by VREfm to colonize regions of the human bowel. However, the role of commensal bacteria during VREfm colonization, in particular following antibiotic treatment, remains largely unknown. We employed amplicon 16S rRNA gene sequencing and metabolomics in a murine model system to try and investigate functional roles of the gut microbiome during VREfm colonization. First-order taxonomic shifts between Bacteroidetes and Tenerricutes within the gut microbial community composition were detected both in response to pretreatment using ceftriaxone, and to subsequent VREfm challenge. Using neural networking approaches to find co-occurrence profiles of bacteria and metabolites, we detected key metabolome features associated with butyric acid during and after VREfm colonization. These metabolite features were associated with Bacteroides, indicative of a transition towards a pre-antibiotic naive microbiome. This study shows the impacts of antibiotics on the gut ecosystem, and the progression of the microbiome in response to colonisation with VREfm. Our results offer insights towards identifying potential non-antibiotic alternatives to eliminate VREfm through metabolic re-engineering to preferentially select for Bacteroides.
DOI: 10.5517/ccdc.csd.cc24gpgs
title: CCDC 1980325: Experimental Crystal Structure Determination

description: Related Article: Yunfan Miao, Youwei Pang, Yu Ye, Joseph R. Smyth, Junfeng Zhang, Dan Liu, Xiang Wang, Xi Zhu|2019|Crystals|9|642|doi:10.3390/cryst9120642
description: Related Article: Yu Ye|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc24gpht
title: CCDC 1980326: Experimental Crystal Structure Determination

description: Related Article: Yunfan Miao, Youwei Pang, Yu Ye, Joseph R. Smyth, Junfeng Zhang, Dan Liu, Xiang Wang, Xi Zhu|2019|Crystals|9|642|doi:10.3390/cryst9120642
description: Related Article: Yu Ye|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc24gpjv
title: CCDC 1980327: Experimental Crystal Structure Determination

description: Related Article: Yunfan Miao, Youwei Pang, Yu Ye, Joseph R. Smyth, Junfeng Zhang, Dan Liu, Xiang Wang, Xi Zhu|2019|Crystals|9|642|doi:10.3390/cryst9120642
description: Related Article: Yu Ye|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc24gpkw
title: CCDC 1980328: Experimental Crystal Structure Determination

description: Related Article: Yunfan Miao, Youwei Pang, Yu Ye, Joseph R. Smyth, Junfeng Zhang, Dan Liu, Xiang Wang, Xi Zhu|2019|Crystals|9|642|doi:10.3390/cryst9120642
description: Related Article: Yu Ye|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc24gplx
title: CCDC 1980329: Experimental Crystal Structure Determination

description: Related Article: Yunfan Miao, Youwei Pang, Yu Ye, Joseph R. Smyth, Junfeng Zhang, Dan Liu, Xiang Wang, Xi Zhu|2019|Crystals|9|642|doi:10.3390/cryst9120642
description: Related Article: Yu Ye|2020|CSD Communication|||
DOI: 10.17632/ynm22j66cx.2
title: Contactless tensile probing of polycrystalline methane hydrate at pore scale

description: Original data for Supplementary Videos 1 and 2 of "Contactless probing of polycrystalline methane hydrate at pore scale suggests weaker tensile properties than thought" by Datig et al., Nature Comm. 2020. The data are video microscopy recordings during an experiment designed to form a polycrystalline methane hydrate halo, which is subsequently subjected to tensile stress using a contactless thermal method. Video 1: Under constant gas pressure of 15 MPa, the temperature is lowered at -5 K/min, followed by an annealing stage at -23.5 °C, and finally the temperature is raised at +0.2 K/min. Video 2: Under constant gas pressure of 15 MPa, the temperature is lowered at -5 K/min, followed by an annealing stage at -5 °C, and finally the temperature is raised at +0.2 K/min.
DOI: 10.25318/82-003-x202000700001-fra
title: L’association entre les concentrations de pollution atmosphérique ambiante et la détresse psychologique

description: La présente étude a porté sur les associations spatiales entre les polluants atmosphériques (particules fines [PM2,5], le dioxyde d'azote [NO2] et l'ozone troposphérique [O3]) et la détresse psychologique chez les sujets des provinces les plus peuplées du Canada.
DOI: 10.21227/e5tk-3y77
title: Supplementary data for "Rechained: Sybil-Resistant Distributed Identities for the Internet of Things and Mobile Ad hoc Networks"

description: Today, more and more Internet of Things devices are deployed, and the field of applications for decentralized, self-organizing networks keeps growing. The growth also makes these systems more attractive to attackers. Sybil attacks are a common issue, especially in decentralized networks and networks deployed in scenarios with irregular or unreliable Internet connectivity. The lack of a central authority that can be contacted at any time allows attackers to introduce arbitrary amounts of nodes into the network and to manipulate its behavior according to the attacker's goals, by posing as a majority participant. Depending on the structure of the network, employing Sybil node detection schemes may be difficult, and low powered Internet of Things devices are usually unable to perform impactful amounts of work for proof-of-work based schemes. In this paper, we present Rechained, a scheme that monetarily disincentivizes the creation of Sybil identities for networks that can operate with intermittent or no Internet connectivity. We introduce a new revocation mechanism for identities, tie them into the concepts of self-sovereign identities and decentralized identifiers. Case-studies are used to discuss upper- and lower-bounds for the costs of Sybil identities and, therefore, the provided security level. Furthermore, we formalize the protocol using Colored Petri Nets to analyze its correctness and suitability. Proof-of-concept implementations are used to evaluate the performance of our scheme on low powered hardware as it might be found in Internet of Things applications.
DOI: 10.21227/w6sx-0787
title: Supplementary data for "Rechained: Sybil-Resistant Distributed Identities for the Internet of Things and Mobile Ad hoc Networks"

description: Today, more and more Internet of Things devices are deployed, and the field of applications for decentralized, self-organizing networks keeps growing. The growth also makes these systems more attractive to attackers. Sybil attacks are a common issue, especially in decentralized networks and networks deployed in scenarios with irregular or unreliable Internet connectivity. The lack of a central authority that can be contacted at any time allows attackers to introduce arbitrary amounts of nodes into the network and to manipulate its behavior according to the attacker's goals, by posing as a majority participant. Depending on the structure of the network, employing Sybil node detection schemes may be difficult, and low powered Internet of Things devices are usually unable to perform impactful amounts of work for proof-of-work based schemes. In this paper, we present Rechained, a scheme that monetarily disincentivizes the creation of Sybil identities for networks that can operate with intermittent or no Internet connectivity. We introduce a new revocation mechanism for identities, tie them into the concepts of self-sovereign identities and decentralized identifiers. Case-studies are used to discuss upper- and lower-bounds for the costs of Sybil identities and, therefore, the provided security level. Furthermore, we formalize the protocol using Colored Petri Nets to analyze its correctness and suitability. Proof-of-concept implementations are used to evaluate the performance of our scheme on low powered hardware as it might be found in Internet of Things applications.
DOI: 10.5281/zenodo.3965834
title: Application specific network traffic with specified activities

description: This dataset contains network traffic of 12 different containerized, isolated applications. It includes headers of network traffic data in the initial two minutes of execution of the application.<br> We have specified each network traffic with an activity that the application was involved in during traffic capturing.<br> ------------------------------------<br> Application name, No. of samples, Engaged activity while capturing<br> ------------------------------------<br> Curl, 60, downloading<br> Firefox, 47, browsing<br> mpg123, 99, audio streaming<br> mplayer, 82, audio streaming<br> mpv, 48, video streaming<br> Slack, 58, no chatting (just opening the app and menus)<br> streamlink, 57, video streaming<br> Trello, 46, just opening the app (just opening the app and menus)<br> Vlc, 102, audio streaming<br> w3m, 60, downloading<br> wget, 20, file downloading<br> wgetaudio, 20, file downloading(audio)<br> wgetvideo, 20, file downloading(video)<br> ydm (mplayer + youtube-dl),61, video streaming
DOI: 10.5281/zenodo.3965833
title: Application specific network traffic with specified activities

description: This dataset contains network traffic of 12 different containerized, isolated applications. It includes headers of network traffic data in the initial two minutes of execution of the application.<br> We have specified each network traffic with an activity that the application was involved in during traffic capturing.<br> ------------------------------------<br> Application name, No. of samples, Engaged activity while capturing<br> ------------------------------------<br> Curl, 60, downloading<br> Firefox, 47, browsing<br> mpg123, 99, audio streaming<br> mplayer, 82, audio streaming<br> mpv, 48, video streaming<br> Slack, 58, no chatting (just opening the app and menus)<br> streamlink, 57, video streaming<br> Trello, 46, just opening the app (just opening the app and menus)<br> Vlc, 102, audio streaming<br> w3m, 60, downloading<br> wget, 20, file downloading<br> wgetaudio, 20, file downloading(audio)<br> wgetvideo, 20, file downloading(video)<br> ydm (mplayer + youtube-dl),61, video streaming
DOI: 10.21227/9axv-hp25
title: Supplementary data for "Rechained: Sybil-Resistant Distributed Identities for the Internet of Things and Mobile Ad hoc Networks"

description: Today, more and more Internet of Things devices are deployed, and the field of applications for decentralized, self-organizing networks keeps growing. The growth also makes these systems more attractive to attackers. Sybil attacks are a common issue, especially in decentralized networks and networks deployed in scenarios with irregular or unreliable Internet connectivity. The lack of a central authority that can be contacted at any time allows attackers to introduce arbitrary amounts of nodes into the network and to manipulate its behavior according to the attacker's goals, by posing as a majority participant. Depending on the structure of the network, employing Sybil node detection schemes may be difficult, and low powered Internet of Things devices are usually unable to perform impactful amounts of work for proof-of-work based schemes. In this paper, we present Rechained, a scheme that monetarily disincentivizes the creation of Sybil identities for networks that can operate with intermittent or no Internet connectivity. We introduce a new revocation mechanism for identities, tie them into the concepts of self-sovereign identities and decentralized identifiers. Case-studies are used to discuss upper- and lower-bounds for the costs of Sybil identities and, therefore, the provided security level. Furthermore, we formalize the protocol using Colored Petri Nets to analyze its correctness and suitability. Proof-of-concept implementations are used to evaluate the performance of our scheme on low powered hardware as it might be found in Internet of Things applications.
DOI: 10.25345/c5h93d
title: MassIVE MSV000083835 - Metabolomics and Genomics Analysis of Clavulanic Acid Producing Streptomyces Species
title: Comparative genomics and metabolomics analyses of clavulanic acid producing Streptomyces species provides insight into specialized metabolism and evolution of beta-lactam biosynthetic gene clusters.

Run a Scherzo column. Positive and negative ionisation mode.
DOI: 10.17632/zdn9pd9wcf.6
title: Data for: Gas-phase oxidation of NO at high pressure relevant to sour gas compression purification process for oxy-fuel combustion flue gas

description: Attached include document for calculating kinetic parameters based on different mechanisms.
DOI: 10.15468/dl.h2qqdu
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Alima pacifica Ahyong, 2001"
 ]
}

 The dataset includes 40 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076089-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8kkxze
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pleuranthodium iboense (Valeton) R.M.Sm."
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076091-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2zradc
title: Occurrence Download

description: A dataset containing 3515 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Germany",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Allium paradoxum (M.Bieb.) G.Don"
 ]
}

 The dataset includes 3515 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076090-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ugare2
title: Occurrence Download

description: A dataset containing 269 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllostachys meyeri McClure"
 ]
}

 The dataset includes 269 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076092-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5hmqkz
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinalia mysorensis (Lindl.) Kuntze"
 ]
}

 The dataset includes 87 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076093-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7aqtrr
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pleuranthodium macropycnanthum (Valeton) R.M.Sm."
 ]
}

 The dataset includes 22 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076095-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yb5up3
title: Occurrence Download

description: A dataset containing 17844 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polygala alpestris Rchb."
 ]
}

 The dataset includes 17844 records from 198 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076094-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ccpad8
title: Occurrence Download

description: A dataset containing 787 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllostachys nidularia Munro"
 ]
}

 The dataset includes 787 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076096-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7g4uu8
title: Occurrence Download

description: A dataset containing 93274 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Bidens frondosa L.)"
 ]
}

 The dataset includes 93274 records from 1098 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076064-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y6vu5g
title: Occurrence Download

description: A dataset containing 98365 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "Year 2023-2024"
 ]
}

 The dataset includes 98365 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076070-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.anyqbb
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinalia obesa (Lindl.) Kuntze"
 ]
}

 The dataset includes 15 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076097-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y57xqj
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pleuranthodium neragaimae (Gilli) R.M.Sm."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076098-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2h48mk
title: CCDC 2298018: Experimental Crystal Structure Determination

description: Related Article: David Svestka, Pavel Bobal, Mario Waser, Jan Otevrel|2024|Org.Lett.|26|2505|doi:10.1021/acs.orglett.4c00818
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.tddkhy
title: Occurrence Download

description: A dataset containing 130 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polygala alpicola Rupr."
 ]
}

 The dataset includes 130 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076099-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/7997663
title: Raw Caesarian Section Dataset for Classification
DOI: 10.15468/dl.3sd592
title: Occurrence Download

description: A dataset containing 9942 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "Geometry POLYGON((115 39,117 39,117 41,115 41,115 39))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2023-2024"
 ]
}

 The dataset includes 9942 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076100-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v92qts
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pleuranthodium papilionaceum (K.Schum.) R.M.Sm."
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076101-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rjwm4w
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinalia ochracea (Rolfe) Schuit., Y.P.Ng & H.A.Pedersen"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076102-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6fycd4
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllostachys nigella T.H.Wen"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076103-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6rhpsg
title: Occurrence Download

description: A dataset containing 3546 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polygala alpina (DC.) Steud."
 ]
}

 The dataset includes 3546 records from 134 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076104-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/zcpmu6/gkgfsp
title: WP502164.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/jzqzoa
title: WP513279.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/4v5pg3
title: WP506093.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/ckfx1u
title: WP501057.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/glowon
title: WP506079.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/hxw5co
title: WP512003.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/psrt9q
title: WP512045.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/rzllrs
title: WP505009.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/3zblo5
title: WP506065.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/8svg4e
title: WP518135.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/dtu15z
title: WP510003.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/tfzo6o
title: WP513211.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/v6mrx8
title: WP505131.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/1cgymu
title: WP519135.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/95kmih
title: WP505013.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/nd648h
title: WP517131.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/nlehnw
title: WP519155.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/ylavdy
title: WP513065.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/dqrv1g
title: WP501059.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/hnhpha
title: WP519113.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/kglr3p
title: WP518087.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/kjhqh3
title: WP513319.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/uo3gyq
title: WP513093.CSV

description: :unav
DOI: 10.7910/dvn/zcpmu6/xtxvcm
title: WP506099.CSV

description: :unav