cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21227/5h7v-aq35
title: Positional data of three different soft robots for actuation commands

description: Soft robots are a promising area of research due to their potential use in various applications. Learning the kinematics of soft robots is crucial for their advancement and application. This dataset is designed to provide training data for the development of machine learning models that can learn the kinematics of soft robots with different actuation types. The dataset includes the positional data of three soft robots, specifically the simulated pneumatic soft robot, simulated tendon-driven soft robot, and real-world tendon-driven soft robot. The paired data for each robot is provided in ".json" format, and each file contains the paired data from different soft robots. The actuation commands in this dataset are sorted by L1 norm and divided into interpolation and extrapolation data. Interpolation data is used to estimate the positional data between the actuation commands, while extrapolation data is used to predict the positional data beyond the range of actuation commands. This allows for the training of machine learning models that can accurately predict the kinematics of soft robots in a variety of scenarios. The dataset can be used to develop machine learning models that can learn the kinematics of soft robots with various actuation types. It can also be used to evaluate the performance of different machine-learning algorithms on this task. The dataset can contribute to the advancement of the field of soft robotics and can be of interest to researchers, engineers, and students working in the field of robotics and machine learning.
DOI: 10.6084/m9.figshare.22791170.v2
title: <strong>Effect of U1 AMO (antisense morpholino oligonucleotides) on translational landscape</strong>

description: U1 snRNP could protect eukaryotic pre-mRNAs from premature mRNA 3’ end processing at thousands of intronic polyadenylation sites (PASs), a phenomenon known as U1 snRNP telescripting, or U1 snRNP inhibition of intronic premature cleavage and polyadenylation (PCPA). An outstanding question in the field is if these U1-regulated truncated forms of pre-mRNAs could be exported to the cytoplasm and have the potential to be translated. It was previously shown that some of the intronic PCPAed products induced by Spliceostatin A, a splicing modulator, might be translated in cells using Ribo-seq analysis. Here we performed similar analysis to address the question that if thousands of U1-regulated PCPAed products have the potential to be translated in the cytoplasm.
DOI: 10.6084/m9.figshare.19948007
title: Database of human well-being and eco-sustainability under planetary pressures of the Belt and Road 1990-2018

description: The database contains 29,621 data records and four core datasets of consumption, pressure, output and efficiency, and one related dataset, covering both sustainability and development aspects of sustainable development. That is, · Consumption dataset, including EF per capita, the Normalization of EF, and the adjusted normalization of EF of 61 B&R countries, B&R regional average and global average from 1990-2018. · Pressure dataset, including CDE per capita and its index, MF per capita and its index, <em>A</em>, and <em>P</em> of 61 B&R countries, B&R regional average and global average from 1990-2019. · Output dataset, including HDI and PHDI of 61 B&R countries, B&R regional average and global average from 1990-2019. · Efficiency dataset, including AEWP and EWP of 61 B&R countries, B&R regional average and global average from 1990-2018. · Other dataset, including BC per capita, ES/ED per capita, and population of 61 B&R countries, B&R regional average and global average from 1990-2018/2019.
DOI: 10.6084/m9.figshare.19948007.v8
title: Database of human well-being and eco-sustainability under planetary pressures of the Belt and Road 1990-2018

description: The database contains 29,621 data records and four core datasets of consumption, pressure, output and efficiency, and one related dataset, covering both sustainability and development aspects of sustainable development. That is, · Consumption dataset, including EF per capita, the Normalization of EF, and the adjusted normalization of EF of 61 B&R countries, B&R regional average and global average from 1990-2018. · Pressure dataset, including CDE per capita and its index, MF per capita and its index, <em>A</em>, and <em>P</em> of 61 B&R countries, B&R regional average and global average from 1990-2019. · Output dataset, including HDI and PHDI of 61 B&R countries, B&R regional average and global average from 1990-2019. · Efficiency dataset, including AEWP and EWP of 61 B&R countries, B&R regional average and global average from 1990-2018. · Other dataset, including BC per capita, ES/ED per capita, and population of 61 B&R countries, B&R regional average and global average from 1990-2018/2019.
DOI: 10.25901/90za-3p46
title: Samford Peri-Urban Vegetation Structure and Cover Data 2010
DOI: 10.6084/m9.figshare.22800230
title: Odonate behavior according to different urbanization levels

description: These data describe the behavior of an odonate (damselflies and dragonflies) community in different habitats with varying degree of urbanization. The data is accompanied by two files. One is related to the description of the data base and a the other has the phylogeny of the species involved.
DOI: 10.26036/cnp0003047
title: A collection of bacterial genomes from cultivated human oral bacteria

description: Increasing investigations indicate that the oral microbiome plays an essential role in maintenance of human healthy. However, the repertoire of cultivated bacterial species and function of oral cavity remains largely unexplored. We herein construct a human oral bacteria culture and genome collection (OBCG), comprised of 1,089 high-quality isolate genomes. The OBCG collection contained 195 species-level clusters belonging to 5 phyla, of which 96 clusters were previously undescribed, representing the potential novel species of human oral cavity.
DOI: 10.26036/cnp0003737
title: RNA-seq of Quercus variabilis

description: RNA-seq of different tissues of Quercus variabilis
DOI: 10.6084/m9.figshare.22800284
title: Raw data measured from the images from A circuit analogy based girth growth model for living architecture design

description: Architecture with and from living trees (Baubotanik) is a promising approach to sustainable, climate-adapted construction. Shaping and grafting allows to create resilient structures that combine the ecological performance and aesthetics of trees with the functions of buildings. In order to design and engineer such living structures, it is necessary to predict the growth of different tree segments, especially when trunks, branches or roots are bent and jointed into a complex inosculated network. To address this, we have developed a tool to forecast the relative girth growth of different segments in such structures based on topological skeletons, the pipe model theory and circuit analogy. We have validated our results with a set of (scaled) photographs of inosculated tree structures of the so-called ‘Tree Circus’, covering over 80 years of their growth. Our model has proven to predict the relative girth growth with sufficient accuracy for conceptual design purposes. So far, it does not allow the simulation of absolute growth in circumference over the course of time that is necessary to predict quantitative technical aspects, such as mechanical performance at a given time. We conclude by briefly lining out how this could be addressed in future research.
DOI: 10.6084/m9.figshare.22800284.v1
title: Raw data measured from the images from A circuit analogy based girth growth model for living architecture design

description: Architecture with and from living trees (Baubotanik) is a promising approach to sustainable, climate-adapted construction. Shaping and grafting allows to create resilient structures that combine the ecological performance and aesthetics of trees with the functions of buildings. In order to design and engineer such living structures, it is necessary to predict the growth of different tree segments, especially when trunks, branches or roots are bent and jointed into a complex inosculated network. To address this, we have developed a tool to forecast the relative girth growth of different segments in such structures based on topological skeletons, the pipe model theory and circuit analogy. We have validated our results with a set of (scaled) photographs of inosculated tree structures of the so-called ‘Tree Circus’, covering over 80 years of their growth. Our model has proven to predict the relative girth growth with sufficient accuracy for conceptual design purposes. So far, it does not allow the simulation of absolute growth in circumference over the course of time that is necessary to predict quantitative technical aspects, such as mechanical performance at a given time. We conclude by briefly lining out how this could be addressed in future research.
DOI: 10.6084/m9.figshare.22800287
title: girth growth simulation in C#.gh from A circuit analogy based girth growth model for living architecture design

description: Grasshopper code to simulate girth growth of inosculated internodes in a topological structure
DOI: 10.6084/m9.figshare.22800287.v1
title: girth growth simulation in C#.gh from A circuit analogy based girth growth model for living architecture design

description: Grasshopper code to simulate girth growth of inosculated internodes in a topological structure
DOI: 10.5281/zenodo.7923013
title: RESTful API Testing with the Power of Large Language Models

description: Sample data for RESTful API Testing with the Power of Large Language Models
DOI: 10.5281/zenodo.7923012
title: RESTful API Testing with the Power of Large Language Models

description: Sample data for RESTful API Testing with the Power of Large Language Models
DOI: 10.5281/zenodo.7922498
title: MUSES Fractional Vegetation Coverage (FVC) 8-Day Global 1km SIN Grid in 2004

description: The MUltiscale Satellite remotE Sensing (MUSES) product suite includes products with different spatial and temporal resolutions for parameters such as Normalized Difference Vegetation Index (NDVI), Near-Infrared Reflectance of Vegetation (NIRv), Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fractional Vegetation Coverage (FVC), Gross Primary Production (GPP), Net Primary Production (NPP). For more information about the MUSES products, please refer to this website (https://muses.bnu.edu.cn/). This dataset is the MUSES global FVC product at 1 km spatial resolution and 8-day temporal resolution. The MUSES FVC product is provided on a Sinusoidal grid and spans from 2000 to 2019 (continuously updated). It was generated from the MUSES LAI product at 1 km resolution and other ancillary information using the complement to unity of the transmittance of light through the entire canopy in the nadir viewing direction (Xiao <em>et al</em>., 2016). The MUSES FVC values are physically consistent with the corresponding MUSES LAI values. The MUSES FVC product is spatially complete and temporally continuous. This dataset is the MUSES FVC product in 2004. <em>Please <strong>click here</strong> to download the MUSES FVC product <strong>in 2003</strong></em>, <em>and <strong>click here</strong> to download the MUSES FVC product <strong>in 2005</strong></em>. <strong>Dataset Characteristics:</strong> Spatial Coverage: Global Temporal Coverage: 2004 Spatial Resolution: 1 km Temporal Resolution: 8 days Projection: Sinusoidal Data Format: HDF Scale: 0.004 Valid Range: 0 – 250 <strong>Citation </strong>(Please cite this paper whenever these data are used)<strong>:</strong> Xiao Zhiqiang, <em>et a</em>l. (2016). Estimating the Fractional Vegetation Cover from GLASS Leaf Area Index Product. <em>Remote Sensing</em>, 8, 337. If you have any questions, please contact Prof. Zhiqiang Xiao (zhqxiao@bnu.edu.cn).
DOI: 10.5281/zenodo.7922497
title: MUSES Fractional Vegetation Coverage (FVC) 8-Day Global 1km SIN Grid in 2004

description: The MUltiscale Satellite remotE Sensing (MUSES) product suite includes products with different spatial and temporal resolutions for parameters such as Normalized Difference Vegetation Index (NDVI), Near-Infrared Reflectance of Vegetation (NIRv), Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fractional Vegetation Coverage (FVC), Gross Primary Production (GPP), Net Primary Production (NPP). For more information about the MUSES products, please refer to this website (https://muses.bnu.edu.cn/). This dataset is the MUSES global FVC product at 1 km spatial resolution and 8-day temporal resolution. The MUSES FVC product is provided on a Sinusoidal grid and spans from 2000 to 2019 (continuously updated). It was generated from the MUSES LAI product at 1 km resolution and other ancillary information using the complement to unity of the transmittance of light through the entire canopy in the nadir viewing direction (Xiao <em>et al</em>., 2016). The MUSES FVC values are physically consistent with the corresponding MUSES LAI values. The MUSES FVC product is spatially complete and temporally continuous. This dataset is the MUSES FVC product in 2004. <em>Please <strong>click here</strong> to download the MUSES FVC product <strong>in 2003</strong></em>, <em>and <strong>click here</strong> to download the MUSES FVC product <strong>in 2005</strong></em>. <strong>Dataset Characteristics:</strong> Spatial Coverage: Global Temporal Coverage: 2004 Spatial Resolution: 1 km Temporal Resolution: 8 days Projection: Sinusoidal Data Format: HDF Scale: 0.004 Valid Range: 0 – 250 <strong>Citation </strong>(Please cite this paper whenever these data are used)<strong>:</strong> Xiao Zhiqiang, <em>et a</em>l. (2016). Estimating the Fractional Vegetation Cover from GLASS Leaf Area Index Product. <em>Remote Sensing</em>, 8, 337. If you have any questions, please contact Prof. Zhiqiang Xiao (zhqxiao@bnu.edu.cn).
DOI: 10.6084/m9.figshare.22800306
title: Data supplement from Correlative super-resolution analysis of cardiac calcium sparks and their molecular origins in health and disease

description: This file contains correlative calcium and DNA-PAINT datasets acquired from both Ctrl-RV and MCT-RV groups, custom-written analysis code and output files.
DOI: 10.6084/m9.figshare.22800306.v1
title: Data supplement from Correlative super-resolution analysis of cardiac calcium sparks and their molecular origins in health and disease

description: This file contains correlative calcium and DNA-PAINT datasets acquired from both Ctrl-RV and MCT-RV groups, custom-written analysis code and output files.
DOI: 10.25919/wcg4-y296
title: Parkes observations for project P1185 semester 2023APRS_01

description: Ultra-long period neutron stars (ULPNSs) are an emerging class of objects that have sparked interest and curiosity in the fast transient community. Along with standard magnetars, they have been theorised to be potential progenitors of the enigmatic fast radio bursts (FRBs). The MeerTRAP project at the MeerKAT radio telescope is uncovering several magnetar and ultra-long period neutron star candidates, an example of which is PSR J0901-4046 with a period of 76s. Continued long-term monitoring of PSR J0901-4046 has shown it to be potentially transitioning into radio quiescence. The proposed observations will enable us to continue to monitor and characterise the decline in flux density. We have also discovered two new candidates MTP0027 and MTP0068 with periods of ~10 seconds and ~5 seconds respectively. Both sources exhibit magnetar-like pulse morphology and have only been detected in one epoch with MeerKAT. We propose to continue monitoring these sources to re-detect pulses and study their spectro-temporal-polarimetric properties.
DOI: 10.5281/zenodo.7905012
title: Single particle tracking data for Sittewelle & Royle (2023)

description: A project to analyse intracellular vesicle mobility. A preprint of the manuscript is available at https://doi.org/10.1101/2023.05.10.540182 Code associated with the manuscript can be found at https://github.com/quantixed/p063p036 TrackMate XML files for: ATG9A, Clathrin, EB3, LAMP1, ML1N, Rab5, Rab11, Rab30, Rab35, SCAMP1, SCAMP3, TPD54 TPD54 (pre and post bleach) are available here together with some of the larger outputs from the code. These TrackMate XML files can be processed using TrackMateR as described here or using the code associated with the manuscript. The folders contain calibration csv files which will correct the scaling where required during processing with TrackMateR.
DOI: 10.25345/c57d2qj0f
title: MassIVE MSV000091913 - Label-free quantification of NMT1 and NMT2 knockout as well as PCLX-001 treated HAP1 cells
title: HAP1 cells with an NMT1, NMT2, or double knockout (as well as wildtype controls) were prepared by in-gel trypsin digestion and analyzed by LC-MS/MS label-free quantification (data-dependent acquisition). Additionally, HAP1 cells were treated with PCLX-001, an NMT inhibitor, at EC50 and EC90 (as well as untreated controls) and analyzed as described previously. (n=3)
DOI: 10.25919/am8v-g431
title: Data for The Global Distribution and Drivers of Grazing Dynamics Estimated from Inverse Modelling

description: We have provided a postprocessed data product containing 10 files, which together can be used to re-create all published figures in the main manuscript and/or extend this analysis.
DOI: 10.6084/m9.figshare.22800333.v1
title: Appendix B: R-script for data management prior to analyses in «Climatic forcing and individual heterogeneity in a resident mountain bird – legacy data reveals effects on reproductive strategies» from Climatic forcing and individual heterogeneity in a resident mountain bird: legacy data reveal effects on reproductive strategies

description: Source file with R code for preparing and combining data used for analyses.
DOI: 10.6084/m9.figshare.22800333
title: Appendix B: R-script for data management prior to analyses in «Climatic forcing and individual heterogeneity in a resident mountain bird – legacy data reveals effects on reproductive strategies» from Climatic forcing and individual heterogeneity in a resident mountain bird: legacy data reveal effects on reproductive strategies

description: Source file with R code for preparing and combining data used for analyses.
DOI: 10.6084/m9.figshare.22800323
title: <strong>Supplementary material</strong> Figure S1. A-CN-K ternary diagram for Tongdonggou section. The grey arrow indicates the weathering trend of the study units. Table S1. Whole-rock major and trace elements composition of the Liantuo and Gucheng Formation of the Tongdonggou section. Table S2. LA-ICP-MS U-Pb analyses of zircons (HZLT-1, TDG-23, and TDG-32) from the Liantuo Formation in the Shennongjia area.

description: Figure S1. A-CN-K ternary diagram for Tongdonggou section. The grey arrow indicates the weathering trend of the study units. Table S1. Whole-rock major and trace elements composition of the Liantuo and Gucheng Formation of the Tongdonggou section. Table S2. LA-ICP-MS U-Pb analyses of zircons (HZLT-1, TDG-23, and TDG-32) from the Liantuo Formation in the Shennongjia area.
DOI: 10.21227/k5dn-tm07
title: Mathlab code

description: Efficiently picking up multiple objects is an emergent challenge for soft robotics. Our work focused on a novel gripper in picking up multiple objects in one grasping trial. The objects contacted softly with multiple elastic wires pre-stretch on the finger skeletons. This integration created a novel hybrid claw that inherited both the stability of the finger skeleton and the soft interaction of the wire. This wiring-claw gripper was designed and set up for conducting experimental evaluations in grasping seven kinds of objects: craft sticks, glue bottles, tea packs, candy pieces, powder packs, pyramids, and spheres. The experimental outcomes presented that our gripper design achieved high success rates in gripping multiple objects per trial at three levels of the lifting velocity. Additionally, the wiring-claw gripper generated soft interaction and was highly adaptive with diverse objects. The outcomes of this study are expected to efficiently pick up various objects at each trial without requiring sensing systems and complicated controls.
DOI: 10.5281/zenodo.7923113
title: Raw data for the transcriptome analysis

description: This file provides the raw data for the transcriptome analysis.
DOI: 10.5281/zenodo.7923112
title: Raw data for the transcriptome analysis

description: This file provides the raw data for the transcriptome analysis.
DOI: 10.15151/esrf-es-1059381370
title: Austrian Crystallographic Diffraction Consortium

description: This proposed Austrian Crystallographic.... TO BE FILLED IN
DOI: 10.15151/esrf-es-1191058575
title: ex situ samples

description: various ex situ samples will be measured for inhouse experiments and for users
DOI: 10.15151/esrf-es-1059599556
title: ITABAG: 3D structures of macromolecules related to human health

description: The ITABAG includes structural biologists from Universities, the National Research Council and Hospital research centres in Italy. The laboratories take advantage of single crystal and small angle X-ray diffraction methods to study the structure-function relationships in various macromolecules. A unifying factor for the vast majority of the macromolecules under study is that they are related to human health, either directly, being human proteins involved in some disease, or indirectly, as proteins expressed by human pathogens and validated as potential pharmacological targets. Other projects investigate basic chemical processes, such as crystal growth, or aim at characterising macromolecules with potential biotechnological applications.
DOI: 10.15151/esrf-es-1128045688
title: Structural and dynamical studies from the Gothenburg BAG

description: The Gothenburg BAG was previously a Gothenburg/Lund BAG, but was remodelled in 2021 so as to reflect the realities that the Lund environment was more focused upon addressing their synchrotron radiation needs through MAX IV Laboratory. Moreover, serial crystallography, both at XFELs and using synchrotron radiation, has become a major of interest of several of the scientists at the University of Gothenburg, and this is not covered in the BAG but within another BAG coordinated at the ESRF. Standard MX using cryo-crystallography, as well as standard SAXS studies, are still an important aspect of our work, but now requires less beamtime than the larger BAG used in the past. Moreover, some of this work is connected to methodology developments or used as a stepping stone towards time-resolved crystallography studies. Overall, we have a diverse collection of projects from the groups in Gothenburg which continue to benefit greatly from access to the ESRF.
DOI: 10.26179/t9h7-z683
title: Measurements Taken During Mirny - Dome C Traverse, 1981
DOI: 10.6084/m9.figshare.17430299
title: R data script and csv data files of manuscript titled: "Elevated dissolved CO2 delays maturation and decreases calcification and survival in the freshwater crustacean Daphnia magna"

description: R script and csv data files complementary to the manuscript.
DOI: 10.5281/zenodo.7923163
title: SNP weightings used for a PRS of melanoma risk

description: The weightings for genetic markers utilized in PRS generation, were derived from independant SNP effect estimate significant at P value &lt; 5e-7) from an adapted iteration of the most recent GWAS meta-analysis on melanoma risk from Landi et al. (Nat Gen, 2020. https://doi.org/10.1038/s41588-020-0611-8). This modified version excluded data from the Brisbane Nevus Morphology Study and the QSkin cohorts, but substantial cohorts such as 23andMe, Inc and UK Biobank were retained. provided are: chromosome, base position (build 37), A1 (effect allele), A2 (non effect allele), P value and odds ratio (OR)