cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.960400
title: Selected palynomorph-based indicators for the Mossy Grove sediment core

description: Palynology: Altogether, 112 samples collected at ~1.2 m intervals from the Mossy Grove borehole between ~17.0 and 152.0 m were treated with 40% HCl for 30 minutes and 60% HF for 24 hours to dissolve carbonates and disaggregate the rock matrix, and sieved over a 10 µm nylon mesh to retain the HF effluent from the material. A second HCl treatment was applied to remove any precipitate, followed by a final sieving over a 10 µm mesh. The remaining sample material (&gt;10 µm) was subjected to oxidation (70% HNO3 for exactly two minutes) to remove pyrite, debris and any unstructured organic material from the palynomorphs, followed by another sieving over a 10 µm mesh to remove any HNO3 effluent. A final cleaning treatment was undertaken with a combination of domestic and industrial detergents. Using swirling techniques, palynomorphs in each sample were then concentrated and Bismark brown was added to make them more visible with light microscopy. Finally, the samples were sieved into two size fractions, 10-30 μm (concentrating spores and pollen) and 30 μm+ (concentrating dinocysts), and then mounted on separate 22x22 mm coverslips, which were glued to a glass slide using Norland optical adhesive. In this work, only the coarse-fraction content of each slide was analyzed. A pilot survey of these slides revealed that the acid and oxidizing technique yielded higher diversity than their non-acid and non-oxidizing counterparts61. The coarse/fine-fraction sorting follows the premise that pollen and spores size mostly ranges between 11 and 44 µm, whereas dinocysts range between 20 and 150 µm62. All slides are stored in the collection of the School of Geography, Earth and Environmental Sciences, University of Birmingham, and are available upon request from Tom Dunkley Jones.Palynomorph components: In this work, the coarse-fraction content of each slide was analyzed with a Zeiss transmitted light microscope (400x magnification). Two hundred dinocyst specimens were counted in each sample, along with any spores, pollen, algae (prasinophyceae and chlorophyceae), zoomorphs/zooclasts, phytoclasts and amorphous organic matter. Only palynomorphs that were more than 50% complete and not obscured either by air bubbles or organic debris were considered 63. Reworked acritarchs and amorphous organic matter were excluded from the final sum of palynomorphs and thereby from the percentage calculations. Palynomorph-based paleoenvironmental indicators include the peridinioid/gonyaulacoid dinocyst (P/G) ratio 64–70, and salinity reconstructions based on the relative abundance of the high-salinity favoring Homotryblium spp. 43,71–73 and in the ratio of short-to-long process of dinocyst genus Spiniferites 74–78.
DOI: 10.1594/pangaea.960404
title: X-ray fluorescence data for the Mossy Grove sediment core

description: Elemental composition of the sediment core was determined using two XRF techniques. 2,098 samples on the original core section were directly analyzed at a resolution of ~1.2 cm across the interval 17.1-109.4 m with a hand-held XRF analyzer at the core store of the Mississippi Department of Environmental Quality, in Jackson, Mississippi. A further 179 samples were collected every 20-30 cm downcore, spanning the interval 106.8-151.6 m, and were subsequently finely ground and dried before analysis as pressed powders in wax pellets. Pellets were analyzed with a Bruker S8 TIGER XRF spectrometer with an 8 min analysis time, at the School of Chemistry, University of Birmingham. We selected the (Al+Fe+K+Ti)/Ca ratio as a paleoenvironmental indicator of terrigenous-derived versus marine planktonic carbonate sediment 79,80. The two methodologies were cross-calibrated over an interval of overlap between 106.8 and 109.4 m, with a total of ~80 samples, spanning a range of compositions, cross-correlated from both analysis methods.
DOI: 10.1594/pangaea.960962
title: Database (DSM) of in situPOC, SPM and Rrs collected between 1997 and 2018

description: This data release includes in situ measurements collected between 2010 and 2014 during different cruise missions and study sites (Full description of the methods adopted for each measurements in the references). Measurements include concentrations of Particulate Organic Carbon (POC) (μgL-1) and Suspended Particulate Matter (SPM) (mg/l), remote-sensing reflectances (Rrs, sr-1), the particulate backscattering coefficient (bbp), and the particulate attenuation coefficient (cp) (m-1) at 650 nm. The first in situ database, named DS0, includes 300 coincident in situ POC, SPM, bbp, and cp measurements. DS1 includes 325 coincident in situ POC, SPM and Rrs.It addressed two main objectives:1) Check the relationship between POC/SPM and bbp/cp2) Develop a POC/SPM algorithm based on Rrs
description: Further funding:* Centre National d'Etudes Spatiales, Award: CNES/TOSCACE/COYOTE
DOI: 10.1594/pangaea.961600
title: Black carbon measurements of ICDP Core 5045-1 from Lake Ohrid
DOI: 10.1594/pangaea.961601
title: Black carbon measurements of composite core Co1215 from Lake Prespa
DOI: 10.1594/pangaea.961603
title: Microcharcoal and pollen content of composite core Co1215 from Lake Prespa
DOI: 10.1594/pangaea.961059
title: Chronology determination of the last 3000 years from Lake Lubińskie in western Poland

description: This chronology dataset contains five columns: depth sed [m], Age [a AD/CE], Age [ka BP], Age min [a AD/CE], and Age max [a AD/CE]. The age-depth model was developed through Bayesian modelling from 2007 CE (the year of coring) down to 428 cm (75 ± 90 BCE). Below this depth, the extrapolation is based on varve counting: 871 varve years were added to extend the age-depth model to the bottom of the profile.
DOI: 10.1594/pangaea.961631
title: Elemental mercury in Atlantic surface water during Polarstern cruise ANT-XXV/1

description: During the Polarstern cruise ANT-XXV/1 in November 2008, surface seawater from below the ship's hull was continuously pumped through a shower head into a 20 L equilibrator bottle and drained at the bottom. Equilibrium between the supplied water and the headspace air (Hg0 equ) was achieved in about 1 h. The equilibrated air was transferred to the TEKRAN 2537A after closing the drain and elemental mercury (Hg0) was preconcentrated by amalgamation on gold traps and finally analyzed by cold vapor atomic fluorescence spectrometry. The detection limit was 0.1 ng L-1. Wind speed was taken from the Polarstern Meteorological station and surface water salinity and temperature from the thermosalinograph. Hg0 equil. was a duplicate measurement of the headspace and provided at standard reference condition of 0°C by the Tekran instrument. The value was corrected to the in situ temperature and divided by Henry's Law constant at respective sea surface water temperature.
description: Further notes on calculated parameters:* H surf ocean and H equil: Solubility of elemental mercury according to Sanemasa (1975) at surface ocean temperature or equilibrator temperature in °C by using the fit H-Sanemasa = 0.000000442*T^3 + 0.000068931*T^2 + 0.005360591*T + 0.16096243 * Hg0-equi sea surface (ng m-3), recalculated from the measurement result Hg0 equil. (ng m-3) at 0°C to in situ temperature by accounting for the solubility difference between equilibrator and the surface ocean (H equil./H surf ocean). This was used for the flux calculation.* Hg0 surf. water (ng m-3): final concentration of elemental mercury in surface water (same as in equilibrator water) in nanogram per cubic metre (Hg0 equil/H-equi)H-equi refers to the Henry's Law constant at a certain temperature (sea surface, equilibrator).
DOI: 10.1594/pangaea.961639
title: Elemental mercury in Atlantic surface water during Polarstern cruise ANT-XXV/5

description: During the Polarstern cruise ANT-XXV/5 in April/May 2009, surface seawater from below the ship's hull was continuously pumped through a shower head into a 20 L equilibrator bottle and drained at the bottom. Equilibrium between the supplied water and the headspace air (Hg0 equ) was achieved in about 1 h. The equilibrated air was transferred to the TEKRAN 2537A after closing the drain and elemetal mercury (Hg0) was preconcentrated by amalgamation on gold traps and finally analyzed by cold vapor atomic fluorescence spectrometry. The detection limit was 0.1 ng L-1. Wind speed was taken from the Polarstern Meteorological station and surface water salinity and temperature from the thermosalinograph. Hg0 equil. was a duplicate measurement of the headspace and provided at standard reference condition of 0°C by the Tekran instrument. The value was corrected to the in situ temperature and divided by Henry's Law constant at respective sea surface water temperature.
description: Further notes on calculated parameters:* H surf ocean and H equil: Solubility of elemental mercury according to Sanemasa (1975) at surface ocean temperature or equilibrator temperature in °C by using the fit H-Sanemasa = 0.000000442*T^3 + 0.000068931*T^2 + 0.005360591*T + 0.16096243 * Hg0-equi sea surface (ng m-3), recalculated from the measurement result Hg0 equil. (ng m-3) at 0°C to in situ temperature by accounting for the solubility difference between equilibrator and the surface ocean (H equil./H surf ocean). This was used for the flux calculation.* Hg0 surf. water (ng m-3): final concentration of elemental mercury in surface water (same as in equilibrator water) in nanogram per cubic metre (Hg0 equil/H-equi)H-equi refers to the Henry's Law constant at a certain temperature (sea surface, equilibrator).
DOI: 10.1594/pangaea.962032
title: Physical oceanography measured with an Underway-CTD (CTD-UW) during the Professor Multanovskiy expedition Transarktika-2019 Leg 4/2 in 2019, Arctic Ocean

description: Underway-CTD (CTD-UW) data were collected during an September-October 2019 expedition to the Laptev and East Siberian Seas aboard the RV Professor Multanovskiy. The underway CTD manufactured by Ocean Science is a self-contained free-falling probe measuring temperature, conductivity and depth while the ship is transiting. The UCTD was operated while the ship was transiting with 4 - 10 knots. The UCTD probe records the start time of the measurements and stores 16 samples each second internally. The exact location of each profile was subsequently found based on the time stamp from the cruise track. The unpumped conductivity sensor has a slower response time than the temperature sensor, which makes the computation of salinity from conductivity and temperature potentially spiky, especially in the pycnocline or in frontal regions. We followed the recommendation of the manufacturer to calculate salinity with Seabird processing software. The salinity is given as Practical Salinity (PSU). In shallower waters (&lt;300 m), the water column was profiled all the way to the seafloor, while in deeper waters, only the upper 600-800 m were sampled. The UCTD was calibrated against a Seabird 9+ CTD during the cruise. Mixing of the water column caused by the ship can reach depths of up to about 5 m, depending on the weather conditions and the ship's speed. Data are from the 2019 Transarktika Expedition (Leg 4/2 from Murmansk to Vladivostok), an initiative of the Russian Antarctic and Arctic Research Institute (AARI), carried out in collaboration with the Russian-German CATS project and funded by Minobrnauki (CATS RFMEFI61619X0108) and BMBF (CATS 03F0831).
DOI: 10.1594/pangaea.962276
title: Cryostratigraphy of exposures with ice wedges studied in the northwestern Siberia
DOI: 10.1594/pangaea.961061
title: CNS determination of the last 3000 years from Lake Lubińskie in western Poland

description: This CNS dataset contains eight columns: Sample ID, Age [a AD/CE], Age [ka BP], Depth sed [m], and content of total carbon (TC), total nitrogen (TN), total sulfur (TS), and total inorganic carbon (TIC), all expressed in %.
DOI: 10.1594/pangaea.961666
title: Elemental mercury in the atmospheric boundary layer of the Atlantic Ocean during Polarstern cruise ANT-XXV/1

description: During Polarstern cruise ANT-XXV/1 in November 2008 , the marine atmosphere was sampled via PTFE (Polytetrafluorethylen) tubing extending from the front of the upper deck to labs on the main deck of r/v Polarstern and then analyzed for elemental mercury in air (Hg0-air) using the same Tekran 2537A as for Hg0-water measurements. The time interval of Hg0-air measurements was 5-min with gaps of about 20 min each hour because of intermittent Hg0-water measurements. The data were checked for potential contamination during tailwind situations (relative wind speed and direction) and doubtful values were removed. The detection limit was 0.1 ng L-1.
DOI: 10.1594/pangaea.961062
title: Diatoms determination of the last 3000 years from Lake Lubińskie in western Poland

description: This diatoms dataset contains the age of the sample (Age [a AD/CE] and Age [ka BP]), % of main taxa contribution (columns 3-16, calculated for the taxa presented in the paper), % of life form – benthonic and planktonic diatoms (columns 17-18, calculated from the whole dataset available), % of pH affinity (columns 19-23, calculated from the entire dataset available), and trophic state (columns 24-30, calculated from the entire dataset available).
DOI: 10.1594/pangaea.961667
title: Elemental mercury in the atmospheric boundary layer of the Atlantic Ocean during Polarstern cruise ANT-XXV/5

description: During Polarstern cruise ANT-XXV/5 in April/May 2009, the marine atmosphere was sampled via PTFE (Polytetrafluorethylen) tubing extending from the front of the upper deck to labs on the main deck of r/v Polarstern and then analyzed for elemental mercury in air (Hg0-air) using the same Tekran 2537A as for Hg0-water measurements. The time interval of Hg0-air measurements was 5-min with gaps of about 20 min each hour because of intermittent Hg0-water measurements. The data were checked for potential contamination during tailwind situations (relative wind speed and direction) and doubtful values were removed. The detection limit was 0.1 ng L-1 (on ANT-XXV/5: 5 times the Hg0-air values were below the detection limit).
DOI: 10.1594/pangaea.962299
title: Radiocarbon dates of enclosing sediments for ice wedges (IW) sites studied in the northwestern Siberia
DOI: 10.15468/dl.m6b6s8
title: Occurrence Download

description: A dataset containing 1812140979 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Animalia)"
 ]
}

 The dataset includes 1812140979 records from 42444 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0094126-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57830/2312723
title: Springs monitoring data for Amistad National Recreation Area, Texas: 2017-2025 - internal

description: This dataset contains long-term monitoring data for springs for Amistad National Recreation Area (2017-2025). Monitoring of seeps, springs, and tinajas provides information on these small and rare systems in parks of the National Park Service’s Chihuahuan Desert Network (CHDN) and Sonoran Desert Network (SODN) parks. These systems are the primary connection between groundwater and surface water and are important water sources for plants and animals. The Southwestern Network Collaboration monitors a suite of springs vital signs and parameters organized into four modules: site characterization, site condition, water quantity, and water quality. The data were collected annually at one or more “sentinel sites” per park (sites chosen based on judgement and other criteria).
DOI: 10.5281/zenodo.15489261
title: Predicting Profit and Loss of Yamaha's bike selling using Linear Regression

description: This paper contributes the profit and Loss of Yamaha Bike selling using Linear regression
DOI: 10.5281/zenodo.15489262
title: Predicting Profit and Loss of Yamaha's bike selling using Linear Regression

description: This paper contributes the profit and Loss of Yamaha Bike selling using Linear regression
DOI: 10.3535/57t-45d-l9y
title: Monacha Fitzinger, 1833

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2t9-y09-518
title: Rissoa monodonta R. A. Philippi, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d5s-dfl-4rs
title: Oliva reticulata (Röding, 1798)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5fy-hzh-f6p
title: Venerupis corrugata (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rfs-hn7-5pe
title: †Danilia otaviana (Cantraine, 1835)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qyv-6kc-clv
title: Poiretia dilatata peloponnesica Subai, 1980

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bwe-dvk-7kx
title: Retusa umbilicata (Montagu, 1803)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ctz-7a9-kd0
title: Spiralina alpinoligustica (Sacco, 1892)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9k0-ep8-b02
title: Chondrula bergeri (J. R. Roth, 1839)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l7s-bqv-8fj
title: Epitonium algerianum (Weinkauff, 1866)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kf1-1ns-7yc
title: Hastula knockeri (E. A. Smith, 1872)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nz5-6mk-hfv
title: Euglesa parvula (Westerlund, 1873)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/978-yza-erl
title: Crisilla beniamina (Monterosato, 1884)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x2x-zfq-ral
title: Ondina vitrea (Brusina, 1866)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y5q-pgk-eqq
title: Lamarcka avellana (Lamarck, 1819)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0cb-6g2-sn5
title: Trochoidea elegans (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9t7-bpc-nsk
title: Parthenina interstincta (J. Adams, 1797)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3me-zqz-xh0
title: Epitonium replicatum (G. B. Sowerby II, 1844)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xhx-y6x-zna
title: Gibberula Swainson, 1840

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jqn-5k1-k04
title: Petricola lithophaga (Retzius, 1788)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yt1-nht-j56
title: Periglypta multicostata (G. B. Sowerby I, 1835)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m7e-0h5-e86
title: Euglandina rosea (A. Férussac, 1821)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.16879487
title: Supplementary Tables S2, S4 and S5 for "Machine Learning–Driven Integration of Cancer Cell Phenotypes Predicts Cisplatin Sensitivity"

description: Overview 

- Figure_S1_v1.0_2025-08-15.jpg, Result_of_hierarchical_clustering. A dendrogram of hierarchical clustering is shown. Using a cutoff distance of 8, 190 cancer cell lines were divided into four clusters.

- Table_S2_List_of_cell_lines_v1.0_2025-08-10.xlsx, List of cell lines included in the analyses.

-Table_S4_Results_of_DEG_analysis_between_cluster_2_(Resistant)_and_cluster_4_(Sensitive)_using_pyDESeq2_v1.0_2025-08-10.xlsx, Differential expression analysis results between cluster 2 (resistant) and cluster 4 (sensitive) using pyDESeq2.

- Table_S5_List_of_SHAP_values_for_each_gene_based_on_machine_learning_model_v1.0_2025-08-10.xlsx, SHAP values per gene derived from the machine learning model.

 

Keywords

cisplatin, machine learning, omics, RNAseq, SHAP, LightGBM, TCGA
DOI: 10.3535/9fc-14l-ds6
title: Eatonina pumila (Monterosato, 1884)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n8k-gm7-qxr
title: Alvania carinata (da Costa, 1778)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5pg-mw4-j5y
title: Megalacron klaarwateri (I. Rensch, 1931)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4m2-n5t-ddg
title: Alvania geryonia (Nardo, 1847)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xe3-6kf-ye5
title: Pseudomacalia antillarum (A. d'Orbigny, 1853)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/app-qvt-pd3
title: Euglesa casertana (Poli, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cl2-ad0-xkc
title: Pachysphaera iloconensis (G. B. Sowerby I, 1841)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k3m-qh5-5zz
title: Corbicula fluminalis (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sqs-rwb-33v
title: Volutoconus coniformis (J. C. Cox, 1871)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8j1-a3m-pp3
title: Sphaerium corneum (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y8w-we0-fpx
title: Euglesa subtruncata (Malm, 1855)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/903-9ma-a0f
title: Abra alba (W. Wood, 1802)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f2y-jwq-27p
title: Longchaeus candidus (Mörch, 1875)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e2s-zxt-qxa
title: Pisidium C. Pfeiffer, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k2w-jbx-1hr
title: Crisilla semistriata (Montagu, 1808)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7pc-t6z-2f0
title: †Granulina clandestina (Brocchi, 1814)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2t7-j22-4ay
title: Cyrillia linearis (Montagu, 1803)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s79-gvk-792
title: Pusillina inconspicua (Alder, 1844)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bel-bqm-7tz
title: Alvania punctura (Montagu, 1803)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sq8-767-0mr
title: Aclis trilineata R. B. Watson, 1897

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a83-yra-4qp
title: Alvania parvula (Jeffreys, 1884)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.