cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/p16sjac6
title: Cooperative National Geologic Map: Quaternary geology

description: The USGS National Cooperative Geologic Mapping Program (NCGMP) was directed by Congress to create a new geologic map of the United States” by “bring[ing] together detailed national and continental-resolution 2D and 3D information produced throughout the Survey and by federal and state partners” (House Report 116-100). To fulfill this goal, the NCGMP created a map synthesis engine (Johnstone and others, 2025) based on the Geologic Map Schema (GeMS) standard (NCGMP, 2020) and used it to bring together source geologic maps originally published by the USGS and State Geological Surveys. This thematic map layer was derived from this database using procedures described by Johnstone and others (2025) and is intended to serve as a legible national map of the nation; while it retains full descriptions of geologic units from source materials it does not include the full search functionality (described in Johnstone and others, 2025) that is facilitated by a true relational database.
The Quaternary Geology layer depicts Quaternary geologic units exposed at the earth’s surface over the entire conterminous United States, inclusive of everything from glacial deposits to lava flows. This includes all units that may, or are known to, span the Quaternary – Neogene boundary. Where present, units older than Quaternary and map units that are primarily colluvium and/or residuum are categorized as generalized rock and regolith units. In the glaciated regions of the Midwest and Northeast, the map is a composite of 8 state geologic maps depicting Quaternary deposits.  In the West and parts of the Southeast, the map is a composite of Quaternary units from 19 state geologic maps depicting geology at the earth’s surface. The remaining area is populated from 18 regional Quaternary geologic maps produced as part of the USGS Quaternary Atlas series. The map is structured as a single GeMS database with three additional tables (also described in Johnstone and others, 2025); a Source_DescriptionOfMapunits table preserves all source inputs, a synthesis_to_source_units table relates aggregated national units to original map units, and a Symbol_Lookup table provides definitions of all FGDC geologic map symbol code values (U.S. Geological Survey, 2006) used for stylizing the map.
DOI: 10.15468/dl.rhwmnd
title: Occurrence Download

description: A dataset containing 266 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Astroides calycularis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-6.6 29.26705, -6.6 50.94, 40.81373 50.94, 40.81373 29.26705, -6.6 29.26705))",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Material sample)"
 ]
}

 The dataset includes 266 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000676-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.29xv75
title: Occurrence Download

description: A dataset containing 341 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Loliolus japonica"
 ]
}

 The dataset includes 341 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000678-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8c9zyg
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Loliolus sumatrensis"
 ]
}

 The dataset includes 16 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000679-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p147sgss
title: Cooperative National Geologic Map: Pre-Quaternary geology

description: The USGS National Cooperative Geologic Mapping Program (NCGMP) was directed by Congress to create a new geologic map of the United States” by “bring[ing] together detailed national and continental-resolution 2D and 3D information produced throughout the Survey and by federal and state partners” (House Report 116-100). To fulfill this goal, the NCGMP created a map synthesis engine (Johnstone and others, 2025) based on the Geologic Map Schema (GeMS) standard (NCGMP, 2020) and used it to bring together source geologic maps originally published by the USGS and State Geological Surveys. This thematic map layer was derived from this database using procedures described by Johnstone and others (2025) and is intended to serve as a legible national map of the nation; while it retains full descriptions of geologic units from source materials it does not include the full search functionality (described in Johnstone and others, 2025) that is facilitated by a true relational database.
The pre-Quaternary Geology layer depicts geologic units older than Quaternary, exclusive of units whose ages span the Quaternary-Neogene boundary. The map was assembled from State geologic maps showing Pre-Quaternary “bedrock” in the glaciated regions of the Midwest and Northeast, which is mostly buried by Quaternary glacial deposits, and from State geologic maps showing geology at the earth’s surface elsewhere. Where present, Quaternary and Quaternary-Tertiary units are categorized as a generic cover unit. This map corresponds either to the Earth’s surface (where no Quaternary geology is present) or the subsurface base of Quaternary deposits in the glaciated regions (often called the “top of rock” surface). The map is structured as a single GeMS database with three additional tables (also described in Johnstone and others, 2025); a Source_DescriptionOfMapunits table preserves all source inputs, a synthesis_to_source_units table relates aggregated national units to original map units, and a Symbol_Lookup table provides definitions of all FGDC geologic map symbol code values (U.S. Geological Survey, 2006) used for stylizing the map.
DOI: 10.5281/zenodo.16962726
title: A mihc mrxs example
DOI: 10.5281/zenodo.16962727
title: A mihc mrxs example
DOI: 10.5066/p1ukdjsm
title: Regional airborne electromagnetic and magnetic surveys of the Basin and Range Province in Nevada, Oregon, and California, 2022-2023

description: Airborne electromagnetic (AEM) and magnetic survey data were collected from December 2022 through March 2023 over a distance of 11,079 line kilometers in western Nevada and eastern California; central Nevada; and northern Nevada and southeastern Oregon. These data were collected in support of the U.S. Geological Survey (USGS) Earth Mapping Resources Initiative (Earth MRI), which aims to improve knowledge of the geologic framework of the United States through new geological and geophysical mapping and to identify areas that may have the potential to contain critical mineral resources. Data were acquired by XCalibur Multiphysics with the HELITEM² time-domain helicopter-borne electromagnetic system together with the CS-3 Scintrex Cesium Vapour magnetometer. The survey was acquired at a nominal flight height of 35 meters (m) above terrain and an average height of 80 - 85 meters. AEM data were processed and inverted to produce models of electrical resistivity along flight paths, with typical total depth of investigation around 400 meters. The survey was divided into three areas of interest (AOI) and used four different configurations of the HELITEM² system:

AOI1 is located in western Nevada and Eastern California and covers numerous basins surrounding Clayton Valley and Rhyolite Ridge. The following system configurations were used:
	
21 meter diameter loop with 30 Hz base frequency. Data collected with this system are noted with the tag _21m_30Hz in the netCDF.
35 meter diameter loop with 7.5 Hz base frequency (system 1). Data collected with this system are noted with the tag _35m_7p5Hz_sys1 in the netCDF.
35 meter diameter loop with 7.5 Hz base frequency (system 2). Data collected with this system are noted with the tag _35m_7p5Hz_sys2 in the netCDF.


AOI2 is located in northern Nevada and southeastern Oregon and covers the region surrounding McDermitt Caldera. One system configuration with a 21 meter diameter loop and base frequency of 15 Hz was used for data collection.
AOI3 is located in central Nevada and covers Railroad Valley and surrounding basins. One system configuration with a 21 meter diameter loop and base frequency of 15 Hz was used for data collection. This is the same configuration used in AOI2.
DOI: 10.5066/p13tsv2j
title: Cooperative National Geologic Map: Precambrian geology

description: The USGS National Cooperative Geologic Mapping Program (NCGMP) was directed by Congress to create a new geologic map of the United States” by “bring[ing] together detailed national and continental-resolution 2D and 3D information produced throughout the Survey and by federal and state partners” (House Report 116-100). To fulfill this goal, the NCGMP created a map synthesis engine (Johnstone and others, 2025) based on the Geologic Map Schema (GeMS) standard (NCGMP, 2020) and used it to bring together source geologic maps originally published by the USGS and State Geological Surveys. This thematic map layer was derived from this database using procedures described by Johnstone and others (2025) and is intended to serve as a legible national map of the nation; while it retains full descriptions of geologic units from source materials it does not include the full search functionality (described in Johnstone and others, 2025) that is facilitated by a true relational database.
The Precambrian Geology layer depicts all Precambrian rocks in the United States, inclusive of map units with minimum ages younger than Precambrian, such as the “Paleozoic to Precambrian” units shown on some older maps. The map was composited from all geologic maps that show Precambrian rocks, including where they are mostly buried beneath Phanerozoic sedimentary rocks and inferred from boreholes and geophysical data. In areas covered by maps of both Precambrian outcrops and buried Precambrian basement, the outcropping Precambrian units are preserved instead of the more generalized buried units. Due to the great disparity in scale and degree of interpretation between outcrop maps and subsurface maps, the Precambrian layer is highly discontinuous along map boundaries. Phanerizoic rocks are included in the map, subdivided into stratified rocks vs. igneous and metamorphic rocks.  The map is structured as a single GeMS database with three additional tables (also described in Johnstone and others, 2025); a Source_DescriptionOfMapunits table preserves all source inputs, a synthesis_to_source_units table relates aggregated national units to original map units, and a Symbol_Lookup table provides definitions of all FGDC geologic map symbol code values (U.S. Geological Survey, 2006) used for stylizing the map.
DOI: 10.15468/dl.vx23da
title: Occurrence Download

description: A dataset containing 2349155 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON((-99.77735 18.84631,-98.2838 18.96974,-98.27763 20.14853,-99.83289 20.0683,-99.77735 18.84631))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2349155 records from 874 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000573-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t5yjj3
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Loliolus uyii"
 ]
}

 The dataset includes 20 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000680-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.56d6h3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Osteochilus bellus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000682-250827131500795/datasets/export for details.
DOI: 10.5066/p146vgvm
title: Cooperative National Geologic Map: Earth’s surface geology

description: The USGS National Cooperative Geologic Mapping Program (NCGMP) was directed by Congress to create a new geologic map of the United States” by “bring[ing] together detailed national and continental-resolution 2D and 3D information produced throughout the Survey and by federal and state partners” (House Report 116-100). To fulfill this goal, the NCGMP created a map synthesis engine (Johnstone and others, 2025) based on the Geologic Map Schema (GeMS) standard (NCGMP, 2020) and used it to bring together source geologic maps originally published by the USGS and State Geological Surveys. This thematic map layer was derived from this database using procedures described by Johnstone and others (2025) and is intended to serve as a legible national map of the nation; while it retains full descriptions of geologic units from source materials it does not include the full search functionality (described in Johnstone and others, 2025) that is facilitated by a true relational database.
The Earth’s Surface Geology layer depicts geologic units exposed at the earth’s surface over the entire conterminous United States, inclusive of everything from Quaternary glacial deposits to Precambrian crystalline bedrock. In the West and Southeast, the map is a composite of 29 state geologic maps depicting geology at the earth’s surface. In the glaciated region of the Midwest and Northeast, the map is a composite of 21 state geologic maps depicting pre-Quaternary rocks (“bedrock”), 8 state geologic maps depicting Quaternary deposits, and 18 USGS Quaternary Atlas Series maps depicting Quaternary deposits; the Quaternary Atlas maps were used where modern state geologic maps were not available. Quaternary and pre-Quaternary maps were composited by replacing bedrock, residuum, and colluvium (as identified in the GeMS Geomaterials field) on Quaternary maps with the corresponding content from the underlying pre-Quaternary maps (including line and point features). The map is structured as a single GeMS database with three additional tables (also described in Johnstone and others, 2025); a Source_DescriptionOfMapunits table preserves all source inputs, a synthesis_to_source_units table relates aggregated national units to original map units, and a Symbol_Lookup table provides definitions of all FGDC geologic map symbol code values (U.S. Geological Survey, 2006) used for stylizing the map.
DOI: 10.15468/dl.5t85qj
title: Occurrence Download

description: A dataset containing 3319 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dryobates frontalis"
 ]
}

 The dataset includes 3319 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000683-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gr2gvp
title: Occurrence Download

description: A dataset containing 1964448 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phyllostachys aureosulcata, Phyllostachys bissetii, Phyllostachys edulis, Phyllostachys flexuosa, Phyllostachys nigra, Phyllostachys reticulata, Phymatosorus scolopendria, Solanaceae, Physalis angulata, Physalis lagascae, Physalis peruviana, Physalis philadelphica, Physalis pruinosa, Physalis pubescens, Physalis viscosa, Physocarpus opulifolius, Phytolacca acinosa, Phytolacca americana, Phytolacca dioica, Phytolacca icosandra)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation)",
 "HasCoordinate is true",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 1964448 records from 3539 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000642-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eup6u8
title: Occurrence Download

description: A dataset containing 117578 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dromaius novaehollandiae",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 117578 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005836-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/vex3t-qra14
title: Pfl 121509 MP36

description: Prosthecobacter fluviatilis, 10jan14a_MP36_Pfl-stat_035,
description: <strong>Tilt Series Date:</strong> 2010-01-14</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Prosthecobacter fluviatilis</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> cultured by Martin Pilhofer; data collected by Martin Pilhofer; processed by Martin Pilhofer</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity, blotting 1/-2/2/0/1/4/200</p>
  mpa2010-01-14-29_slicer7292.jpg: Filaments
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2010-01-14-29/rawdata/</p>10jan14a_MP36_Pfl-stat_035.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2010-01-14-29/rawdata/10jan14a_MP36_Pfl-stat_035.mrc"
        > <i class="download icon"></i> Download </a></p>

        10jan14a_MP36_Pfl-stat_035_full.rec,  Reconstruction (Pixel Size 1.9 nm), 838.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2010-01-14-29/3dimage_14475/10jan14a_MP36_Pfl-stat_035_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/6261f-82h66
title: Rhodobacter 1558 cryosections

description: Cryosections by MArk Ladinsky
description: <strong>Tilt Series Date:</strong> 2010-09-27</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-61.0°, 64.0°), step: 2°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Judy Armitage</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in SUX media</p>
<strong>Sample Preparation:</strong> prepared for cryosectioning (gold prep see JWIKI)</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-09-27-47/rawdata/</p>10sep27a_Rhsections_071.st,  Tilt Series (Pixel Size 0.0 nm), 528.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-09-27-47/rawdata/10sep27a_Rhsections_071.st"
        > <i class="download icon"></i> Download </a></p>

        10sep27a_Rhsections_071.rec,  Reconstruction (Pixel Size 0.0 nm), 93.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-09-27-47/3dimage_15129/10sep27a_Rhsections_071.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/jcwhc-9jt48
title: HeLa CHMP4A+VPS4DN

description: HeLa cells transfected with CHMP4A+VPS4DN constructs
description: <strong>Tilt Series Date:</strong> 2011-07-24</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HeLa cells</p>
<strong>Strain:</strong> ATCC</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -7.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> CHMP4A and VPS4DN obstruct provided by Wes Sundquist. Cells transfected, frozen and imaged at Caltech by Cora Woodward</p>
<strong>Purification / Growth Conditions / Treatment:</strong> whole cells grown on grids and transfected</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-07-24-1/rawdata/</p>11jul24_hela_4aDNlipo_10_trim.st,  Tilt Series (Pixel Size 0.5 nm), 834.1 MB  
        
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        > <i class="download icon"></i> Download </a></p>

        11jul24_hela_4aDNlipo_10_trim_full.rec,  Reconstruction (Pixel Size 2.0 nm), 929.0 MB  
        
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        > <i class="download icon"></i> Download </a></p>