cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2dz2q6
title: CCDC 2233448: Experimental Crystal Structure Determination

description: Related Article: Yi-Xiong Dong, Chun-Lin Zhang, Zhong-Hua Gao, Song Ye|2023|Org.Lett.|25|855|doi:10.1021/acs.orglett.3c00006
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dzrkq
title: CCDC 2234094: Experimental Crystal Structure Determination

description: Related Article: Ketema Alemayehu Asserese, Hanmin Huang|2023|Org.Lett.|25|1109|doi:10.1021/acs.orglett.3c00019
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7677819
title: Images of H4K8ac Immunostain in IMR90 Cells

description: Files are two-channel images at 49 unique xy positions showing the fluorescence intensity of a DRAQ5 DNA stain (c1) and H4K8ac immunostain with an Alexa488 secondary (c2). Imaging was performed using a Nikon Ti2-E inverted microscope equipped with a Yokogawa CSU-W1 confocal spinning disk unit and a Zyla 2.3 PLUS sCMOS camera. We used 488 nm and 647 nm laser lines paired with 525/36 (MVI, 77074803), and 705/72 (MVI, 77074329) emission filters, respectively. Samples were imaged through a 1.15 NA CFI Apo LWD Lambda S 40X water immersion objective lens (Nikon MRD77410). The imagining system was controlled by NIS-Elements AR software.
DOI: 10.5281/zenodo.7677818
title: Images of H4K8ac Immunostain in IMR90 Cells

description: Files are two-channel images at 64 unique xy positions showing the fluorescence intensity of a DRAQ5 DNA stain (c1) and H4K8ac immunostain with an Alexa488 secondary (c2). Imaging was performed using a Nikon Ti2-E inverted microscope equipped with a Yokogawa CSU-W1 confocal spinning disk unit and a Zyla 2.3 PLUS sCMOS camera. We used 488 nm and 647 nm laser lines paired with 525/36 (MVI, 77074803), and 705/72 (MVI, 77074329) emission filters, respectively. Samples were imaged through a 1.15 NA CFI Apo LWD Lambda S 40X water immersion objective lens (Nikon MRD77410). The imagining system was controlled by NIS-Elements AR software.
DOI: 10.5281/zenodo.7677835
title: Images of H4K8ac Immunostain in IMR90 Cells

description: Files are two-channel images at 64 unique xy positions showing the fluorescence intensity of a DRAQ5 DNA stain (c1) and H4K8ac immunostain with an Alexa488 secondary (c2). Imaging was performed using a Nikon Ti2-E inverted microscope equipped with a Yokogawa CSU-W1 confocal spinning disk unit and a Zyla 2.3 PLUS sCMOS camera. We used 488 nm and 647 nm laser lines paired with 525/36 (MVI, 77074803), and 705/72 (MVI, 77074329) emission filters, respectively. Samples were imaged through a 1.15 NA CFI Apo LWD Lambda S 40X water immersion objective lens (Nikon MRD77410). The imagining system was controlled by NIS-Elements AR software.
DOI: 10.34740/kaggle/dsv/5060294
title: Plants Type Datasets
DOI: 10.5281/zenodo.7677856
title: Table 9. Result of absorbance measurement of hydroxyproline standard solution at = 559 nm

description: Table 9. Result of absorbance measurement of hydroxyproline standard solution at = 559 nm
DOI: 10.5281/zenodo.7677855
title: Table 9. Result of absorbance measurement of hydroxyproline standard solution at = 559 nm

description: Table 9. Result of absorbance measurement of hydroxyproline standard solution at = 559 nm
DOI: 10.5281/zenodo.7549596
title: Data to reproduce figures for the paper "The Effect of Tropical Pacific Air-sea Coupling on the Rainfall Response to Abrupt Greenhouse Gas Forcing"

description: Data to reproduce figures for the paper "The Effect of Air-sea Coupling over the Tropical Pacific on the Response in Rainfall to Abrupt Greenhouse Gas Forcing".
DOI: 10.5281/zenodo.7549597
title: Data to reproduce figures for the paper "The Effect of Air-sea Coupling over the Tropical Pacific on the Response in Rainfall to Abrupt Greenhouse Gas Forcing"

description: Data to reproduce figures for the paper "The Effect of Air-sea Coupling over the Tropical Pacific on the Response in Rainfall to Abrupt Greenhouse Gas Forcing".
DOI: 10.5281/zenodo.7677817
title: Data to reproduce figures for the paper "The Effect of Tropical Pacific Air-sea Coupling on the Rainfall Response to Abrupt Greenhouse Gas Forcing"

description: Data to reproduce figures for the paper "The Effect of Air-sea Coupling over the Tropical Pacific on the Response in Rainfall to Abrupt Greenhouse Gas Forcing".
DOI: 10.34740/kaggle/dsv/5065383
title: 💥📰 Daily Breaking News Twitter Dataset
DOI: 10.5517/ccdc.csd.cc2f723w
title: CCDC 2241117: Experimental Crystal Structure Determination

description: Related Article: C. Näther, I. Jess|2023|Acta Crystallogr.,Sect.E:Cryst.Commun.|79|1|doi:10.1107/S2056989023001238
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f74ys
title: CCDC 2241205: Experimental Crystal Structure Determination

description: Related Article: W. Guerrab, A. El Moutaouakil Ala Allah, A. Alsubari, J.T. Mague, Y. Ramli|2023|IUCrData|8|x230125|doi:10.1107/S2414314623001256
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.34740/kaggle/dsv/5065385
title: 🇺🇦 Ukraine Conflict Twitter Dataset
DOI: 10.34740/kaggle/dsv/5062259
title: Demon Slayer Dataset
DOI: 10.34740/kaggle/dsv/5065457
title: Dota 2 Pro League Matches 2023
DOI: 10.5281/zenodo.7677935
title: Hydrodynamic data of Hailing Island

description: The file provides the hydrodynamic data (water depth, wave parameters, current velocity) measured from 30th June to 1st August 2022 at the Hailing Island, Guangdong province, China.
DOI: 10.5281/zenodo.7677934
title: Hydrodynamic data of Hailing Island

description: The file provides the hydrodynamic data (water depth, wave parameters, current velocity) measured from 30th June to 1st August 2022 at the Hailing Island, Guangdong province, China.
DOI: 10.6084/m9.figshare.21823455.v23
title: The ReptileEvolution.com Project

description: Taxon exclusion is the number one problem currently vexing paleontology. The search for pterosaur, turtle, bat, snake, whale, reptile and tetrapod ancestors continues to unnecessarily befuddle paleontologists who continue to work from cherry-picked, textbook and traditional taxon lists that overlook and omit pertinent taxa. That’s why the large reptile tree (LRT), the nearly completely resolved cladogram at the heart of www.ReptileEvolution.com, includes 2212 taxa. Larger taxon numbers minimize taxon exclusion issues. Results indicate the simple act of adding taxa resolves all phylogenetic issues.
DOI: 10.25345/c51j97j38
title: MassIVE MSV000091366 - Integrated Multi-Omic Analysis of Epithelial and Stromal Changes during Progression of Barrett s Esophagus to Adenocarcinoma
title: Esophageal adenocarcinoma arises from Barrett s esophagus, the precancerous metaplastic replacement of squamous by columnar epithelium in response to chronic inflammation. Development of adenocarcinoma is accompanied by non-genetic plasticity of epithelial and stromal cells. Multiomics profiling, integrating single-cell transcriptomics, extracellular matrix proteomics, tissue mechanics and spatial multiplexed proteomics of 64 samples from 12 patient trajectories of progression from normal epithelium, to metaplasia, dysplasia and adenocarcinoma, revealed shared and patient-specific progression paths. We detected profound consistent alterations of type and composition of tumor microenvironment cells, matrix composition and cell neighborhoods. Stromal cells with characteristics of cancer-associated fibroblasts appear early at the premalignant metaplastic stage. Thus, Barrett s esophagus progresses as a coordinated multi-component system, supporting a treatment paradigm that incorporates tissue reprogramming beyond targeting cancerous cells.
DOI: 10.25505/fiz.icsd.cc2d1y8p
title: CSD 2206402: Experimental Crystal Structure Determination

description: Related Article: Sijia Wang, Runze Liu, Juntao Li, Fengke Sun, Tianxin Bai, Songqiu Yang, Jianyong Liu, Junsheng Chen, and Pengfei Cheng|2023|ICSD Communication|||
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.22179215
title: Nucleocytoplasmic transport of active HER2 causes fractional escape from the DCIS-like state

description: Activation of HER2/ErbB2 coincides with escape from ductal carcinoma in situ (DCIS) premalignancy and disrupts 3D organization of cultured breast-epithelial spheroids. The 3D phenotype is infrequent, however, and mechanisms for its incomplete penetrance have been elusive. Using inducible HER2/ErbB2–EGFR/ErbB1 heterodimers, we matched phenotype penetrance to the frequency of co-occurring transcriptomic changes and uncovered a reconfiguration in the karyopherin network regulating ErbB nucleocytoplasmic transport. Induction of the exportin CSE1L inhibits nuclear accumulation of ErbBs, whereas nuclear ErbBs silence the importin KPNA1 by inducing miR-205. When these negative feedbacks are incorporated into a validated systems model of nucleocytoplasmic transport, steady-state localization of ErbB cargo becomes ultrasensitive to initial CSE1L abundance. Erbb2-driven carcinomas with Cse1l deficiency outgrow less irregularly from the mammary duct, and NLS-attenuating mutants or variants of HER2 favor escape in 3D culture. We conclude that adaptive nucleocytoplasmic relocalization of HER2 creates a systems-level molecular switch at the premalignant-to-malignant transition. <br> This Figshare files contains the source data for the above manuscript.
DOI: 10.5281/zenodo.7443942
title: Ganglioglioma deep transcriptomics reveals primitive neuroectoderm neural precursor-like population

description: Ganglioglioma tumor single nucleus RNA sequencing, cellular indexing of transcriptomes by sequencing, and spatial transcriptomics data sets to accompany manuscript of the same title posted to BioRxiv.
DOI: 10.5281/zenodo.7443943
title: Ganglioglioma deep transcriptomics reveals primitive neuroectoderm neural precursor-like population

description: Ganglioglioma tumor single nucleus RNA sequencing, cellular indexing of transcriptomes by sequencing, and spatial transcriptomics data sets to accompany manuscript of the same title posted to BioRxiv.
DOI: 10.5281/zenodo.7677962
title: Ganglioglioma deep transcriptomics reveals primitive neuroectoderm neural precursor-like population

description: Ganglioglioma tumor single nucleus RNA sequencing, cellular indexing of transcriptomes by sequencing, and spatial transcriptomics data sets to accompany manuscript of the same title posted to BioRxiv.
DOI: 10.5066/p9b4h00q
title: Landscape and connectivity metrics based on invasive annual grass cover from 2016-2018 summarized at 15 kilometer grid cells in the Great Basin, USA

description: The spatial context of invasions is increasingly recognized as important for the success and efficiency of management actions. This information can be key for managing invasive grasses that threaten native ecosystems. We calculated landscape metrics and circuit-based centrality for invasive grasses using a source input raster of weighted-average annual herbaceous cover from 2016-2018 (Maestas et al. 2020, 30 meter resolution) in the Great Basin, USA. This shapefile data product includes the summarized landscape metrics and connectivity metrics for 15 kilometer grid cells (n = 2408) across the Great Basin, USA. Metrics for each grid cell include: mean patch area (area_mn), class area (ca), number of patches (np), largest patch index (lpi), mean Euclidean nearest neighbor distance (enn_mn), mean patch contiguity (cntg_mn), aggregation index (ai), and centrality (cntrlty). We also calculated dominant abundance class (dm_bnd_) for comparison with these metric values.
DOI: 10.5066/p93vxvgo
title: Raw MinION FASTQ datafiles corresponding to the paper &amp;amp;ldquo;A comparison of avian influenza virus whole genome sequencing approaches using nanopore technology&amp;amp;rdquo;

description: Raw sequencing data as generated by the five different methods used are provided for each of the three samples used in the comparison. The files are in FASTQ format as exported from the Oxford Nanopore’s MK1C using MinION flowcells. Files are labeled according to the method (as described in the paper) and the Sample ID). The MK1C exports data in blocks of 6000 reads per FASTQ file and all the FASTQ files from each method and sample are grouped in a common folder.
DOI: 10.5066/p9t7naff
title: Biological and physical attributes of side channels of the Upper Mississippi River System

description: Fish richness and physical characteristics of side channels in the Upper Mississippi River and Illinois River.
DOI: 10.6084/m9.figshare.22058909.v1
title: database for MAP2B with GTDB（v202）

description: database for MAP2B with GTDB
DOI: 10.6084/m9.figshare.20025110
title: The anorogenic late Ediacaran granite-rhyolite porphyries of Gabal Abu Durba, Sinai: termination of magmatism in the Neoproterozoic Arabian-Nubian Shield crust

description: Anorogenic magmatism in the northern Arabian-Nubian Shield occurred during a long-lasting crustal extension event (&lt;580 Ma), which succeeded the formation of the Pan-African orogenic belt in NE Africa and Arabia. Late Neoproterozoic anorogenic felsic volcanic-subvolcanic rocks, along with post-collisional granitoid suites, are exposed in the Gabal Abu Durba mountain range along the eastern flank of the Gulf of Suez in Sinai. These rocks include granite and rhyolite porphyries, metaluminous to weakly peralkaline with distinct potassic alkaline and ferroan affinities. Major and trace element characteristics such as K<sub>2</sub>O/MgO &gt;16, total alkalis &gt;8.5 wt.%, (K<sub>2</sub>O + Na<sub>2</sub>O)/CaO &gt;10, agpaitic index (NK/A) &gt;0.85 and Zr (&gt;250 ppm), Nb (&gt;20 ppm), Y (&gt;80 ppm), Zn (&gt;100 ppm) and Ce (&gt;100 ppm), and 10,000 × Ga/Al &gt;2.6 and [Zr + Nb + Y + Ce] &gt;350 ppm are suggestive of an A-type granite genesis. Zircon U-Pb dating of two representative samples returned crystallization ages of 569 ± 2.6 Ma and 561.7 ± 3.2 Ma for granite and rhyolite porphyries, respectively. The melting temperatures estimated at 997–1020°C are consistent with high-temperature liquidus conditions. Fractional crystallization, coupled with less significant crustal assimilation, was likely the main mechanism of formation of these rocks from a common primitive asthenospheric mantle-derived trachytic magma in an anorogenic intra-plate setting. The A-type alkali granite and rhyolite porphyries of Gabal Abu Durba are manifestations of mantle upwelling and lower crust underplating in the late Ediacaran anorogenic stage. These felsic subvolcanic intrusions (≈ 569–562 Ma) along with their volcanic counterparts constitute a new unmatched rock unit that most probably represent the last chapter of the anorogenic magmatism in the Neoproterozoic Arabian-Nubian Shield crust before the beginning of Phanerozoic era.
DOI: 10.6084/m9.figshare.20025110.v1
title: The anorogenic late Ediacaran granite-rhyolite porphyries of Gabal Abu Durba, Sinai: termination of magmatism in the Neoproterozoic Arabian-Nubian Shield crust

description: Anorogenic magmatism in the northern Arabian-Nubian Shield occurred during a long-lasting crustal extension event (&lt;580 Ma), which succeeded the formation of the Pan-African orogenic belt in NE Africa and Arabia. Late Neoproterozoic anorogenic felsic volcanic-subvolcanic rocks, along with post-collisional granitoid suites, are exposed in the Gabal Abu Durba mountain range along the eastern flank of the Gulf of Suez in Sinai. These rocks include granite and rhyolite porphyries, metaluminous to weakly peralkaline with distinct potassic alkaline and ferroan affinities. Major and trace element characteristics such as K<sub>2</sub>O/MgO &gt;16, total alkalis &gt;8.5 wt.%, (K<sub>2</sub>O + Na<sub>2</sub>O)/CaO &gt;10, agpaitic index (NK/A) &gt;0.85 and Zr (&gt;250 ppm), Nb (&gt;20 ppm), Y (&gt;80 ppm), Zn (&gt;100 ppm) and Ce (&gt;100 ppm), and 10,000 × Ga/Al &gt;2.6 and [Zr + Nb + Y + Ce] &gt;350 ppm are suggestive of an A-type granite genesis. Zircon U-Pb dating of two representative samples returned crystallization ages of 569 ± 2.6 Ma and 561.7 ± 3.2 Ma for granite and rhyolite porphyries, respectively. The melting temperatures estimated at 997–1020°C are consistent with high-temperature liquidus conditions. Fractional crystallization, coupled with less significant crustal assimilation, was likely the main mechanism of formation of these rocks from a common primitive asthenospheric mantle-derived trachytic magma in an anorogenic intra-plate setting. The A-type alkali granite and rhyolite porphyries of Gabal Abu Durba are manifestations of mantle upwelling and lower crust underplating in the late Ediacaran anorogenic stage. These felsic subvolcanic intrusions (≈ 569–562 Ma) along with their volcanic counterparts constitute a new unmatched rock unit that most probably represent the last chapter of the anorogenic magmatism in the Neoproterozoic Arabian-Nubian Shield crust before the beginning of Phanerozoic era.
DOI: 10.6084/m9.figshare.20047414
title: The Cenomanian–Turonian Boundary Event (CTBE) as recorded in the northern margin of Africa: palaeoceanography of the Oceanic Anoxic Event (OAE-2), North-Central Tunisia

description: Samples spanning the Cenomanian–Turonian transition at Guern Halfaya Section of North-Central Tunisia were analysed for elemental and isotopic chemostratigraphic characterization of the OAE-2 global anoxic event. Comparison with other published sections of the same age was achieved. These geochemical analyses, which cover the local Bahloul Formation, add new insights into the palaeoceanographic evolution of the southern Tethyan margin during the Cenomanian–Turonian transition. The use of discrete redox-sensitive and primary productivity-sensitive trace element data coupled to isotopic and biostratigraphic events is shown as leading proxies for the determination of prevailing warming palaeoceanographic conditions, in terms of productivity and climate, during the OAE-2 in the northern margin of Africa. Such event is believed to have generated one among the most significant source rocks of the region.
DOI: 10.6084/m9.figshare.20047414.v2
title: The Cenomanian–Turonian Boundary Event (CTBE) as recorded in the northern margin of Africa: palaeoceanography of the Oceanic Anoxic Event (OAE-2), North-Central Tunisia

description: Samples spanning the Cenomanian–Turonian transition at Guern Halfaya Section of North-Central Tunisia were analysed for elemental and isotopic chemostratigraphic characterization of the OAE-2 global anoxic event. Comparison with other published sections of the same age was achieved. These geochemical analyses, which cover the local Bahloul Formation, add new insights into the palaeoceanographic evolution of the southern Tethyan margin during the Cenomanian–Turonian transition. The use of discrete redox-sensitive and primary productivity-sensitive trace element data coupled to isotopic and biostratigraphic events is shown as leading proxies for the determination of prevailing warming palaeoceanographic conditions, in terms of productivity and climate, during the OAE-2 in the northern margin of Africa. Such event is believed to have generated one among the most significant source rocks of the region.
DOI: 10.21227/m335-9592
title: Matlab code-Vaccine Allocation

description: Supplementary data and source code for vaccine allocation study
DOI: 10.5281/zenodo.7519337
title: Datasets accompanying "Ultrafast reversible self-assembly of living tangled matter"

description: Datasets showing the structure and dynamics of tangling worms
DOI: 10.5281/zenodo.7519336
title: Datasets accompanying "Ultrafast reversible self-assembly of living tangled matter"

description: Datasets showing the structure and dynamics of tangling worms
DOI: 10.6084/m9.figshare.22179332
title: Changes of P-wave velocity and attenuation with fluid properties

description: Changes of velocity and attenuation of P-wave in fluid-saturated Berea sandstone, in response to fluid properties.
DOI: 10.6084/m9.figshare.22179332.v1
title: Changes of P-wave velocity and attenuation with fluid properties

description: Changes of velocity and attenuation of P-wave in fluid-saturated Berea sandstone, in response to fluid properties.
DOI: 10.6084/m9.figshare.22179275
title: database for MAP2B with RefSeq

description: database for MAP2B with RefSeq
DOI: 10.6084/m9.figshare.22179275.v1
title: database for MAP2B with RefSeq

description: database for MAP2B with RefSeq
DOI: 10.6084/m9.figshare.22179275.v2
title: database for MAP2B with RefSeq

description: database for MAP2B with RefSeq
DOI: 10.21227/gq04-b598
title: WiFi (CSI and RSSI) Data of Six Basic Knife Activities for Cooking (chopping, cubing, French cutting, julienning, mincing, and slicing)

description: To gather the dataset, we asked two participants to perform six basic knife activities. The layout of the system experiment is provided in Fig. 4. As it illustrates, we put the receiver on the right side and the ESP32 transceiver on the left side of the performing area. The performing area is a cutting board (30 x 46 cm) in this experiment. Each participant performs each activity five times in the performing area. The data is recorded using a customized version of ESP32-CSI-tool [38] on the laptop that helps us to record and save each data in a separate file. After recording all 60 data entries, we used a python code to extract the clean data from all generated text by the tool. The clean data is stored in a database and creates the dataset.
DOI: 10.34740/kaggle/dsv/5065980
title: Road Dataset-National Highways of Bangladesh(2020)
DOI: 10.6084/m9.figshare.22179353
title: The study data of "Seawater-groundwater-river interactions alter nitrogen cycle patterns and nitrogen availability in the Coastal Earth Critical Zone".

description: This dataset includes physicochemical parameters, stable isotopes, and the 16S rDNA sequencing data of the microbial community of water samples in the Coastal Earth Critical Zone.
DOI: 10.6084/m9.figshare.22179353.v1
title: The study data of "Seawater-groundwater-river interactions alter nitrogen cycle patterns and nitrogen availability in the Coastal Earth Critical Zone".

description: This dataset includes physicochemical parameters, stable isotopes, and the 16S rDNA sequencing data of the microbial community of water samples in the Coastal Earth Critical Zone.
DOI: 10.6084/m9.figshare.22179419
title: Reporting Guidelines

description: CONSORT CHECK LIST, CONSORT FLOW DIAGRAM
DOI: 10.6084/m9.figshare.22179419.v1
title: Reporting Guidelines

description: CONSORT CHECK LIST, CONSORT FLOW DIAGRAM