cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6460228
title: Diversity in the Expressed Genomic Host Response to Myocardial Infarction - Validation Dataset

description: External validation was performed by separately hierarchically clustering 934 patients with STEMI in an independent cohort[1] into 2 groups (232 and 702 individuals) based on Illumina HT12v4-profiled PBMC expression (median time 21 hour between cardiac catheterization and blood sampling). Probes with most variable expression intensities (SD≥0.5, 216 probes, excluding ribosomal genes) were used. From the 20 most differentially expressed genes in the discovery cohort described in the manuscript Toma et al. 2022 [2], 19 were available in the validation cohort. Column names include the Illumina identifyer and the mapped gene name as used in the discovery cohort. Values are log2-transformed, quantile-normalized, batch-corrected values, see also [1] for methodological details. Acknowledgement: This work is supported by LIFE – Leipzig Research Center for Civilization Diseases, Universität Leipzig. LIFE is funded by means of the European Union, by the European Regional Development Fund (ERDF) and by means of the Free State of Saxony within the framework of the excellence initiative. 1) Teren A, Kirsten H, Beutner F, Scholz M, Holdt LM, Teupser D, Gutberlet M, Thiery J, Schuler G, Eitel I. Alteration of multiple leukocyte gene expression networks is linked with magnetic resonance markers of prognosis after acute st-elevation myocardial infarction. <em>Scientific Reports</em>. 2017;7:41705 2) Toma A, dos Santos C, Burzyńska B, Góra M, Kiliszek M, Stickle N, Kirsten H, Kosyakovsky L, Wang B, van Diepen S, Epelman S, Szekely Y, Marshall JC, Billia F, Lawler PR (2022), Diversity in the Expressed Genomic Host Response to Myocardial Infarction, submitted.
DOI: 10.48370/ofd/r5d3lg/avcdhi
title: MRIPAS_coll_114584_exp_39549_MicrotusAgrestis_1968_scan.jpg

description: :unav
DOI: 10.5281/zenodo.6460227
title: Diversity in the Expressed Genomic Host Response to Myocardial Infarction - Validation Dataset

description: External validation was performed by separately hierarchically clustering 934 patients with STEMI in an independent cohort[1] into 2 groups (232 and 702 individuals) based on Illumina HT12v4-profiled PBMC expression (median time 21 hour between cardiac catheterization and blood sampling). Probes with most variable expression intensities (SD≥0.5, 216 probes, excluding ribosomal genes) were used. From the 20 most differentially expressed genes in the discovery cohort described in the manuscript Toma et al. 2022 [2], 19 were available in the validation cohort. Column names include the Illumina identifyer and the mapped gene name as used in the discovery cohort. Values are log2-transformed, quantile-normalized, batch-corrected values, see also [1] for methodological details. Acknowledgement: This work is supported by LIFE – Leipzig Research Center for Civilization Diseases, Universität Leipzig. LIFE is funded by means of the European Union, by the European Regional Development Fund (ERDF) and by means of the Free State of Saxony within the framework of the excellence initiative. 1) Teren A, Kirsten H, Beutner F, Scholz M, Holdt LM, Teupser D, Gutberlet M, Thiery J, Schuler G, Eitel I. Alteration of multiple leukocyte gene expression networks is linked with magnetic resonance markers of prognosis after acute st-elevation myocardial infarction. <em>Scientific Reports</em>. 2017;7:41705 2) Toma A, dos Santos C, Burzyńska B, Góra M, Kiliszek M, Stickle N, Kirsten H, Kosyakovsky L, Wang B, van Diepen S, Epelman S, Szekely Y, Marshall JC, Billia F, Lawler PR (2022), Diversity in the Expressed Genomic Host Response to Myocardial Infarction, submitted.
DOI: 10.48370/ofd/r5d3lg/wns4bp
title: MRIPAS_coll_114584_MicrotusAgrestis_1968_M_skull_jaw_scan_ct.swf

description: :unav
DOI: 10.48370/ofd/r5d3lg
title: Microtus agrestis - 114584, Zoological collection of the Mammal Research Institute, PAS

description: Microtus agrestis (Field vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1968-07, in: Biebrza National Park, Czerwone Bagno, Poland. Material type: skull, jaw
DOI: 10.48370/ofd/kvlbmy/ork7w8
title: MRIPAS_coll_114350_exp_39315_MicrotusAgrestis_1968_scan.jpg

description: :unav
DOI: 10.48370/ofd/kvlbmy/poldro
title: MRIPAS_coll_114350_MicrotusAgrestis_1968_F_skull_jaw_scan_ct.swf

description: :unav
DOI: 10.48370/ofd/kvlbmy
title: Microtus agrestis - 114350, Zoological collection of the Mammal Research Institute, PAS

description: Microtus agrestis (Field vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1968-07, in: Biebrza National Park, Czerwone Bagno, Poland. Material type: skull, jaw
DOI: 10.48370/ofd/750vzg/o9gbzf
title: MRIPAS_coll_114920_exp_39885_MicrotusAgrestis_1968_scan.jpg

description: :unav
DOI: 10.48370/ofd/750vzg/pxodxh
title: MRIPAS_coll_114920_MicrotusAgrestis_1968_M_skull_jaw_scan_ct.swf

description: :unav
DOI: 10.48370/ofd/750vzg
title: Microtus agrestis - 114920, Zoological collection of the Mammal Research Institute, PAS

description: Microtus agrestis (Field vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1968-08, in: Biebrza National Park, Czerwone Bagno, Poland. Material type: skull, jaw
DOI: 10.48370/ofd/lrstkz/yza6to
title: MRIPAS_coll_114635_exp_39600_MicrotusAgrestis_1968_scan.jpg

description: :unav
DOI: 10.48370/ofd/lrstkz/sdircw
title: MRIPAS_coll_114635_MicrotusAgrestis_1968_M_skull_jaw_scan_ct.swf

description: :unav
DOI: 10.48370/ofd/lrstkz
title: Microtus agrestis - 114635, Zoological collection of the Mammal Research Institute, PAS

description: Microtus agrestis (Field vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1968-08, in: Biebrza National Park, Czerwone Bagno, Poland. Material type: skull, jaw
DOI: 10.48370/ofd/2rrqpf/dhpx3l
title: MRIPAS_coll_114468_exp_39433_MicrotusAgrestis_1968_scan.jpg

description: :unav
DOI: 10.48370/ofd/2rrqpf/9nmlrz
title: MRIPAS_coll_114468_MicrotusAgrestis_1968_M_skull_jaw_scan_ct.swf

description: :unav
DOI: 10.48370/ofd/2rrqpf
title: Microtus agrestis - 114468, Zoological collection of the Mammal Research Institute, PAS

description: Microtus agrestis (Field vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1968-08, in: Biebrza National Park, Czerwone Bagno, Poland. Material type: skull, jaw
DOI: 10.5281/zenodo.6321438
title: Data for Deciphering-the-CO2-emissions-and-emission-intensity-of-cement-sector-in-China-through-decomposition-analysis

description: The dataset contains data for Figure 7-13 in our article "<em>Deciphering the CO<sub>2</sub> emissions and emission intensity of cement sector in China through decomposition analysis</em>", and data for part of<em> China Cement Industry Dataset (CCID)</em>.
DOI: 10.5281/zenodo.6321437
title: Data for Deciphering-the-CO2-emissions-and-emission-intensity-of-cement-sector-in-China-through-decomposition-analysis

description: The dataset contains data for Figure 7-13 in our article "<em>Deciphering the CO<sub>2</sub> emissions and emission intensity of cement sector in China through decomposition analysis</em>", and data for part of<em> China Cement Industry Dataset (CCID)</em>.
DOI: 10.5281/zenodo.6460339
title: Research Integrity Assessment Tool

description: Research Integrity Assessment Tool for randomized controlled trials included in evidence syntheses
DOI: 10.5281/zenodo.6460338
title: Research Integrity Assessment Tool

description: Research Integrity Assessment Tool for randomized controlled trials included in evidence syntheses
DOI: 10.5281/zenodo.6460346
title: Data from: Neuron numbers link innovativeness with both absolute and relative brain size in birds

description: A long-standing issue in biology is whether the intelligence of animals can be predicted by absolute or relative brain size. However, progress has been hampered by an insufficient understanding of how neuron numbers shape internal brain organization and cognitive performance. Based on estimations of neuron numbers for 111 bird species, we show here that the number of neurons in the pallial telencephalon is positively associated with a major expression of intelligence: innovation propensity. The number of pallial neurons, in turn, is greater in brains that are larger in both absolute and relative terms, and positively co-varies with longer post-hatching development periods. Thus, our analyses show that neuron numbers link cognitive performance to both absolute and relative brain size through developmental adjustments. These findings help unify neuro-anatomical measures at multiple levels, reconciling contradictory views over the biological significance of brain expansion. The results also highlight the value of a life history perspective to advance our understanding of the evolutionary bases of the connections between brain and cognition.
description: This research was funded by MINECO (PID2020-119514GB-I00, to D.S.), the Czech Science Foundation (18-15020S, to P.N.), the Grant Agency of Charles University (1438217 to M.K.) and the European Union's Horizon 2020 research and innovation program under the Marie Skłodowska-Curie postdoctoral fellowship (grant agreement 838998, to F.S).
DOI: 10.5281/zenodo.6460345
title: Data from: Neuron numbers link innovativeness with both absolute and relative brain size in birds

description: A long-standing issue in biology is whether the intelligence of animals can be predicted by absolute or relative brain size. However, progress has been hampered by an insufficient understanding of how neuron numbers shape internal brain organization and cognitive performance. Based on estimations of neuron numbers for 111 bird species, we show here that the number of neurons in the pallial telencephalon is positively associated with a major expression of intelligence: innovation propensity. The number of pallial neurons, in turn, is greater in brains that are larger in both absolute and relative terms, and positively co-varies with longer post-hatching development periods. Thus, our analyses show that neuron numbers link cognitive performance to both absolute and relative brain size through developmental adjustments. These findings help unify neuro-anatomical measures at multiple levels, reconciling contradictory views over the biological significance of brain expansion. The results also highlight the value of a life history perspective to advance our understanding of the evolutionary bases of the connections between brain and cognition.
description: This research was funded by MINECO (PID2020-119514GB-I00, to D.S.), the Czech Science Foundation (18-15020S, to P.N.), the Grant Agency of Charles University (1438217 to M.K.) and the European Union's Horizon 2020 research and innovation program under the Marie Skłodowska-Curie postdoctoral fellowship (grant agreement 838998, to F.S).
DOI: 10.6084/m9.figshare.18271061
title: Supplementary Material for: Picture description in the assessment of connected speech intelligibility in Parkinson's disease: A pilot study

description: Introduction: Assessment of intelligibility in dysarthria tends to rely on oral reading of sentences or words. However, self-generated utterances are closer to a clients’ natural speech. This study investigated how transcription of utterances elicited by picture description can be used in the assessment of intelligibility in speakers with Parkinson’s disease. Methods: Speech samples from eleven speakers with Parkinson’s disease and six neurologically healthy persons were audio-recorded. Forty-two naive listeners completed transcriptions of self-generated sentences from a picture description task and orally read sentences from the Swedish Test of Intelligibility, as well as scaled ratings of narrative speech samples. Results: Intelligibility was higher in orally read than self-generated sentences and higher for content words than for the whole sentence in self-generated sentences for most of the speakers, although these within-group differences were not statistically significant at group level. Adding contextual leads for the listeners increased intelligibility in self-generated utterances significantly, but with individual variation. Although correlations between the intelligibility measures were at least moderate or strong, there was a considerable inter- and intra-speaker variability in intelligibility scores between tasks for the speakers with Parkinson’s disease, indicating individual variation of factors that impact intelligibility. Intelligibility scores from neurologically healthy speakers were generally high across tasks with no significant differences between the conditions. Discussion/Conclusion: Within-speaker variability support literature recommendations to use multiple methods and tasks when assessing intelligibility. The inclusion of transcription of self-generated utterances elicited by picture description to the intelligibility assessment has the potential to provide additional information to assessment methods based on oral reading of pre-scripted sentences, and to inform the planning of interventions.
DOI: 10.6084/m9.figshare.18271061.v1
title: Supplementary Material for: Picture description in the assessment of connected speech intelligibility in Parkinson's disease: A pilot study

description: Introduction: Assessment of intelligibility in dysarthria tends to rely on oral reading of sentences or words. However, self-generated utterances are closer to a clients’ natural speech. This study investigated how transcription of utterances elicited by picture description can be used in the assessment of intelligibility in speakers with Parkinson’s disease. Methods: Speech samples from eleven speakers with Parkinson’s disease and six neurologically healthy persons were audio-recorded. Forty-two naive listeners completed transcriptions of self-generated sentences from a picture description task and orally read sentences from the Swedish Test of Intelligibility, as well as scaled ratings of narrative speech samples. Results: Intelligibility was higher in orally read than self-generated sentences and higher for content words than for the whole sentence in self-generated sentences for most of the speakers, although these within-group differences were not statistically significant at group level. Adding contextual leads for the listeners increased intelligibility in self-generated utterances significantly, but with individual variation. Although correlations between the intelligibility measures were at least moderate or strong, there was a considerable inter- and intra-speaker variability in intelligibility scores between tasks for the speakers with Parkinson’s disease, indicating individual variation of factors that impact intelligibility. Intelligibility scores from neurologically healthy speakers were generally high across tasks with no significant differences between the conditions. Discussion/Conclusion: Within-speaker variability support literature recommendations to use multiple methods and tasks when assessing intelligibility. The inclusion of transcription of self-generated utterances elicited by picture description to the intelligibility assessment has the potential to provide additional information to assessment methods based on oral reading of pre-scripted sentences, and to inform the planning of interventions.
DOI: 10.15151/esrf-es-756888284
title: Structural Biology at EMBL Grenoble, IBS-CIBB and IAB

description: The proposals covers a broad range of structural biology projects related to pathogen biology, host-pathogen interactions, RNA biology and structure-based drug development that are carried out by PIs at EMBL Grenoble, IBS-CIBB and IAB. The proposers have long-standing experience in the use, as well as the development of beam lines for macromolecular crystallography and have participated in successive BAG applications over the years, mostly at the ESRF but also at other synchrotrons (e.g. Soleil, Petra III, Diamond, SLS).
DOI: 10.14278/rodare.1541
title: Syntetic Spectra Data used in publication "Differential evolution optimization of Rutherford back-scattering spectra"

description: The zip-file contains all synthetic spectra as used for and described in the publication "Differential evolution optimization of Rutherford back-scattering spectra" and all simulation input files for the code RUTHELDE presented therein. Naming according to the text in the paper. All files are in human readable ASCII format. The simulation input files can be best viewed with any kind of JSON file editor.
DOI: 10.5281/zenodo.6449052
title: Augmented/Virtual Reality interest 2022

description: Tweets about trending topics
DOI: 10.5281/zenodo.6449051
title: Augmented/Virtual Reality interest 2022

description: Tweets about trending topics
DOI: 10.6084/m9.figshare.19596511
title: Supplementary InformatIon 2022

description: Supplementary InformatIon for 2 x figures and 1 x table.
DOI: 10.6084/m9.figshare.19596511.v1
title: Supplementary InformatIon 2022

description: Supplementary InformatIon for 2 x figures and 1 x table.
DOI: 10.48370/ofd/ghwwsd
title: Chlorophorus ruficornis (Olivier, 1790), C-819

description: Coleoptera collection
DOI: 10.25345/c5fn10w61
title: MassIVE MSV000089256 - VOCS aldehydes for GNPS analysis and library search
title: GC/MS electron ionization of mixtures or aldehydes for GNPS and identification
DOI: 10.5281/zenodo.6343418
title: [Dataset] Determining the origin of tidal oscillations in the ionospheric transition region with EISCAT radar and global simulation data

description: Preprocessed data
DOI: 10.48370/ofd/jg0zcz
title: Chlorophorus robustior (Pic, 1900), C-820

description: Coleoptera collection
DOI: 10.6084/m9.figshare.19596562
title: Supplementary Material for: Association between Depression and Clinical Outcomes following Percutaneous Coronary Intervention: A Meta-Analysis

description: <b><i>Background:</i></b> Several studies suggested that depression was associated with poor prognosis following percutaneous coronary intervention (PCI) in coronary heart disease (CHD), whereas other studies showed that there were no associations between depression and poor outcomes. <b><i>Objectives:</i></b> Considering these problems, this meta-analysis was conducted to evaluate the relationship between depression and clinical outcomes after PCI. <b><i>Methods:</i></b> Articles published before July 2021 were analyzed from the databases: PubMed, Web of Science, EMBASE, Medline, and Google Scholar. Hazard ratios (HRs) and 95% confidence intervals (CIs) were computed to generate a pooled effect size and 95% CI with a random or fixed effects model. <i>Q</i> test and <i>I</i><sup>2</sup> were used to assess heterogeneities between studies. <b><i>Results:</i></b> The meta-analysis indicated that depression was associated with a higher risk of major adverse cardiac events (MACE) after PCI with a random effects model (HR = 1.89, 95% CI: 1.33–2.68, <i>I</i><sup>2</sup> = 57.0%, <i>p</i> = 0.023). The study indicated that depression was associated with a higher risk of all-cause mortality after PCI with a fixed effects model (HR = 1.71, 95% CI: 1.43–2.05, <i>I</i><sup>2</sup> = 0.0%, <i>p</i> = 0.756). The study indicated no significant association between depression and risk of repeat revascularization after PCI with a random effects model (HR = 2.10, 95% CI: 0.96–4.58, <i>I</i><sup>2</sup> = 68.9%, <i>p</i> = 0.022). <b><i>Conclusion:</i></b> Results indicated that depression is associated with adverse clinical outcomes in CHD patients’ post-PCI. Appropriate mental health check and psychological treatment may be necessary for the prognosis of CHD patients who receive PCI.
DOI: 10.6084/m9.figshare.19596562.v1
title: Supplementary Material for: Association between Depression and Clinical Outcomes following Percutaneous Coronary Intervention: A Meta-Analysis

description: <b><i>Background:</i></b> Several studies suggested that depression was associated with poor prognosis following percutaneous coronary intervention (PCI) in coronary heart disease (CHD), whereas other studies showed that there were no associations between depression and poor outcomes. <b><i>Objectives:</i></b> Considering these problems, this meta-analysis was conducted to evaluate the relationship between depression and clinical outcomes after PCI. <b><i>Methods:</i></b> Articles published before July 2021 were analyzed from the databases: PubMed, Web of Science, EMBASE, Medline, and Google Scholar. Hazard ratios (HRs) and 95% confidence intervals (CIs) were computed to generate a pooled effect size and 95% CI with a random or fixed effects model. <i>Q</i> test and <i>I</i><sup>2</sup> were used to assess heterogeneities between studies. <b><i>Results:</i></b> The meta-analysis indicated that depression was associated with a higher risk of major adverse cardiac events (MACE) after PCI with a random effects model (HR = 1.89, 95% CI: 1.33–2.68, <i>I</i><sup>2</sup> = 57.0%, <i>p</i> = 0.023). The study indicated that depression was associated with a higher risk of all-cause mortality after PCI with a fixed effects model (HR = 1.71, 95% CI: 1.43–2.05, <i>I</i><sup>2</sup> = 0.0%, <i>p</i> = 0.756). The study indicated no significant association between depression and risk of repeat revascularization after PCI with a random effects model (HR = 2.10, 95% CI: 0.96–4.58, <i>I</i><sup>2</sup> = 68.9%, <i>p</i> = 0.022). <b><i>Conclusion:</i></b> Results indicated that depression is associated with adverse clinical outcomes in CHD patients’ post-PCI. Appropriate mental health check and psychological treatment may be necessary for the prognosis of CHD patients who receive PCI.
DOI: 10.5519/qd.f89keg84
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1006 records)
DOI: 10.5523/bris.1zpa0tdgslky32c7htztoc03ee
title: Data for: Manufacture and buckling test of a variable-stiffness, variable-thickness composite cylinder under axial compression

description: Data pertaining to the publication 'Manufacture and buckling test of a variable-stiffness, variable-thickness composite cylinder under axial compression' in AIAA journal
DOI: 10.6084/m9.figshare.19596535
title: Supplementary material to Brands (2022): Common errors in the regional atmospheric circulation simulated by the CMIP multi-model ensemble

description: This is the supplementary material to the article: <br> Brands (2022): Common errors in the regional atmospheric circulation simulated by the CMIP multi-model ensemble, currently in review <br> For further details, please see the README.txt file within the .zip file.
DOI: 10.6084/m9.figshare.19596535.v2
title: Supplementary material to Brands (2022): Common errors in the regional atmospheric circulation simulated by the CMIP multi-model ensemble

description: This is the supplementary material to the article: <br> Brands (2022): Common errors in the regional atmospheric circulation simulated by the CMIP multi-model ensemble, currently in review <br> For further details, please see the README.txt file within the .zip file.
DOI: 10.6084/m9.figshare.19596535.v1
title: Supplementary Material to Brands (2022): Common errors in the regional atmospheric circulation simulated by the CMIP multi-model ensemble, in review

description: This is the supplementary material to the article: <br> Brands (2022): Common errors in the regional atmospheric circulation simulated by the CMIP multi-model ensemble, currently in review <br> For further details, please see the README.txt file within the .zip file.
DOI: 10.5517/ccdc.csd.cc25yng8
title: CCDC 2024500: Experimental Crystal Structure Determination

description: Related Article: Jiancheng Li, Daniel J. Goffitzer, Meiyu Xiang, Yilin Chen, Wenjun Jiang, Martin Diefenbach, Hongping Zhu, Max C. Holthausen, Herbert W. Roesky|2021|J.Am.Chem.Soc.|143|8244|doi:10.1021/jacs.1c03149
DOI: 10.5517/ccdc.csd.cc25ynh9
title: CCDC 2024501: Experimental Crystal Structure Determination

description: Related Article: Jiancheng Li, Daniel J. Goffitzer, Meiyu Xiang, Yilin Chen, Wenjun Jiang, Martin Diefenbach, Hongping Zhu, Max C. Holthausen, Herbert W. Roesky|2021|J.Am.Chem.Soc.|143|8244|doi:10.1021/jacs.1c03149