cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.5rq3s8
title: Occurrence Download

description: A dataset containing 9951 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (iNaturalist Research-grade Observations, The Coleoptera of the southwest of Primorsky Krai, Russian Far East, Local floras of Russia: records from literature, Vascular plants of the Soviet Far East (1985-2006): georeferenced records from dot maps, Estonian University of Life Sciences Institute of Agricultural and Environmental Sciences Entomological Collection, EOD – eBird Observation Dataset, University of Minnesota Insect Collection, Moscow University Herbarium (MW), RU-BIRDS.RU, Birds observations database from Russia and neighboring regions. Zoological Museum of M.V. Lomonosov Moscow State University., \"Flora of Russia\" on iNaturalist: a trusted backlog)",
 "Geometry POLYGON((130.94605 42.48624,131.48872 42.48624,131.48872 42.77835,130.94605 42.77835,130.94605 42.48624))",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum assumed WGS84, Continent derived from coordinates, Recorded date invalid, Taxon match fuzzy, Taxon match higher rank, The taxon concept ID was not found in the checklist, The taxon ID was not found in the checklist, Modified date invalid, Multimedia URI invalid, Occurrence status inferred from individual count, Collection match none, Institution match fuzzy, Collection match fuzzy)",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (28eb1a3f-1c15-4a95-931a-4af90ecb574d, f5fc4e61-b7a0-414b-ab68-b41cb23e7fdc, 1158c872-239b-4d40-bfc5-53138cdf4f37, 32859580-c30c-4367-8a8a-71f00fc9f833, e2e717bf-551a-4917-bdc9-4fa0f342c530, c49fdf8d-5648-4ae7-b0be-d3d9c67bc755)"
 ]
}

 The dataset includes 9951 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005448-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fvymrh
title: Occurrence Download

description: A dataset containing 1056 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is DNK",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Juglans regia"
 ]
}

 The dataset includes 1056 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005449-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8cwzue
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tagetes minuta",
 "Country is Greece",
 "HasCoordinate is true"
 ]
}

 The dataset includes 15 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005450-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/848-0sc-ca4
title: Dicotyledoneae DC.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.15468/dl.u5s94x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tagetes minuta",
 "Country is Guatemala",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005452-250717081556266/datasets/export for details.
DOI: 10.15468/dl.9kcajn
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mimosa pigra",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 42 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005451-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5v7rmw
title: Occurrence Download

description: A dataset containing 1069 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sebaea exacoides"
 ]
}

 The dataset includes 1069 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005453-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.42bthy
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calophyllum eputamen"
 ]
}

 The dataset includes 28 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005454-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f3rmbx
title: Occurrence Download

description: A dataset containing 2212 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (iNaturalist Research-grade Observations, The Coleoptera of the southwest of Primorsky Krai, Russian Far East, Local floras of Russia: records from literature, Vascular plants of the Soviet Far East (1985-2006): georeferenced records from dot maps, Estonian University of Life Sciences Institute of Agricultural and Environmental Sciences Entomological Collection, EOD – eBird Observation Dataset, University of Minnesota Insect Collection, Moscow University Herbarium (MW), RU-BIRDS.RU, Birds observations database from Russia and neighboring regions. Zoological Museum of M.V. Lomonosov Moscow State University., \"Flora of Russia\" on iNaturalist: a trusted backlog)",
 "Geometry POLYGON((130.94605 42.48624,131.48872 42.48624,131.48872 42.77835,130.94605 42.77835,130.94605 42.48624))",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum assumed WGS84, Continent derived from coordinates, Recorded date invalid, Taxon match fuzzy, Taxon match higher rank, The taxon concept ID was not found in the checklist, The taxon ID was not found in the checklist, Modified date invalid, Multimedia URI invalid, Occurrence status inferred from individual count, Collection match none, Institution match fuzzy, Collection match fuzzy)",
 "IucnRedListCategory is one of (EX, EW, CR, EN, VU, NT, LC, DD, NE)",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (28eb1a3f-1c15-4a95-931a-4af90ecb574d, f5fc4e61-b7a0-414b-ab68-b41cb23e7fdc, 1158c872-239b-4d40-bfc5-53138cdf4f37, 32859580-c30c-4367-8a8a-71f00fc9f833, e2e717bf-551a-4917-bdc9-4fa0f342c530, c49fdf8d-5648-4ae7-b0be-d3d9c67bc755)"
 ]
}

 The dataset includes 2212 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005455-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zj7pka
title: Occurrence Download

description: A dataset containing 622 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Centaurea maculosa micranthos, Centaurea micranthos, Centaurea paniculata micranthos, Centaurea paniculata micranthos, Centaurea radoslavoffii, Centaurea stoebe australis, Centaurea stoebe micranthos, Centaurea sublanata australis, Centaurea ustulata, Centaurea scabiosa sadleriana)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 622 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005458-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29596673
title: <b>In-situ transformable photothermal targeting chimeras for spatiotemporally controllable protein degradation and combination immunotherapy for cancer</b>

description: Targeted protein degradation (TPD) technology has been extensively exploited for cancer therapy. However, most current TPD approaches lack tissue specificity and are intended to induce on-target but also have off-tumor side effects. Moreover, simultaneous degradation of membrane and cytoplasmic proteins by a single TPD method remains a formidable challenge. To achieve tumor-specific degradation of immune-related membranes and intracellular proteins of interest, we rationally engineered a set of photothermal-targeting chimeras (PTTACs) by integrating a photothermal agent and a protein ligand. The PTTACs display superior photothermal conversion efficacy and protein binding affinity, can be readily loaded into acidity-activatable micellar nanoparticles, and can be specifically delivered into the tumor milieu for in situ self-assembly into two-dimensional nanosheets and selectively bind to proteins of interest (POIs). The combination of 808 nm laser irradiation with PTTAC nanosheets highly specifically degrades both the membrane (e.g., programmed death ligand 1 (PD-L1)) and intracellular (e.g., bromodomain protein 4 (BRD4)) proteins via the autophagy pathway. We demonstrated that the combination of the PTTACs-based nanoplatform with 808 nm laser irradiation markedly reduced 4T1 breast tumor growth and suppressed tumor metastasis by abolishing PD-L1 and BRD4 expression in tumor cells in vivo. Overall, this study provides a robust strategy for spatiotemporally confined protein degradation and combination immunotherapy of solid tumors.
DOI: 10.6084/m9.figshare.29596673.v1
title: <b>In-situ transformable photothermal targeting chimeras for spatiotemporally controllable protein degradation and combination immunotherapy for cancer</b>

description: Targeted protein degradation (TPD) technology has been extensively exploited for cancer therapy. However, most current TPD approaches lack tissue specificity and are intended to induce on-target but also have off-tumor side effects. Moreover, simultaneous degradation of membrane and cytoplasmic proteins by a single TPD method remains a formidable challenge. To achieve tumor-specific degradation of immune-related membranes and intracellular proteins of interest, we rationally engineered a set of photothermal-targeting chimeras (PTTACs) by integrating a photothermal agent and a protein ligand. The PTTACs display superior photothermal conversion efficacy and protein binding affinity, can be readily loaded into acidity-activatable micellar nanoparticles, and can be specifically delivered into the tumor milieu for in situ self-assembly into two-dimensional nanosheets and selectively bind to proteins of interest (POIs). The combination of 808 nm laser irradiation with PTTAC nanosheets highly specifically degrades both the membrane (e.g., programmed death ligand 1 (PD-L1)) and intracellular (e.g., bromodomain protein 4 (BRD4)) proteins via the autophagy pathway. We demonstrated that the combination of the PTTACs-based nanoplatform with 808 nm laser irradiation markedly reduced 4T1 breast tumor growth and suppressed tumor metastasis by abolishing PD-L1 and BRD4 expression in tumor cells in vivo. Overall, this study provides a robust strategy for spatiotemporally confined protein degradation and combination immunotherapy of solid tumors.
DOI: 10.5281/zenodo.15855028
title: Dataset underlying the publication: Museomics reveals patterns of within-species divergence and diversification in Troides birdwings (Lepidoptera: Papilionidae)

description: Sundaland, a subcontinent situated in the Indo-Malay Archipelago, is characterised by a dynamic climatic, geological, and geographical history and a correspondingly diverse biota. The distribution of this biota follows complex biogeographical patterns, with high levels of local endemism and frequent instances of hidden diversity – greater genetic differentiation than expected based on phenotype. Despite their high species richness and complex distributions, there is a paucity of biogeographical studies on Sundaic insects. By applying molecular “museomics” techniques to a species group of Troides birdwing butterflies, we generated inter- and intraspecific datasets comprising 39,485 - 59,905 SNP positions and complete mitogenomes from museum specimens collected between the 1890’s and 1990’s. Using these datasets, we were able to investigate the species status, biogeography, and divergence timing within the Sundaland endemic amphrysus-group. The origin of the group was estimated between the late Miocene and early Pliocene, and subsequent divergence took place during the Pleistocene within the different species complexes. Earlier-diverging taxa were found on Borneo whilst later-diverging taxa had distributions centred in western Sundaland. Divergence between subspecies of later-diverging species complexes occurred >1 million years ago, overlapping with marine incursions on the Sunda Shelf. Javan populations showed comparatively high genetic differentiation from those on other Sundaic landmasses. T. amphrysis euthydemus (Fruhstorfer, 1913) syn. nov. is synonymized with T. amphrysus ruficollis (Butler, 1879) given the low divergence between these two species. We found genetic evidence of possible hidden species-level diversity within the species complexes Troides cuneifera Oberthür 1879 and Troides miranda Butler 1869, for which we recommend further taxonomic work. Together, these results provide a perspective on Triodes evolutionary dynamics and the role of Pleistocene glaciations in shaping patterns of insect diversity in Sundaland.
DOI: 10.5281/zenodo.15855029
title: Dataset underlying the publication: Museomics reveals patterns of within-species divergence and diversification in Troides birdwings (Lepidoptera: Papilionidae)

description: Sundaland, a subcontinent situated in the Indo-Malay Archipelago, is characterised by a dynamic climatic, geological, and geographical history and a correspondingly diverse biota. The distribution of this biota follows complex biogeographical patterns, with high levels of local endemism and frequent instances of hidden diversity – greater genetic differentiation than expected based on phenotype. Despite their high species richness and complex distributions, there is a paucity of biogeographical studies on Sundaic insects. By applying molecular “museomics” techniques to a species group of Troides birdwing butterflies, we generated inter- and intraspecific datasets comprising 39,485 - 59,905 SNP positions and complete mitogenomes from museum specimens collected between the 1890’s and 1990’s. Using these datasets, we were able to investigate the species status, biogeography, and divergence timing within the Sundaland endemic amphrysus-group. The origin of the group was estimated between the late Miocene and early Pliocene, and subsequent divergence took place during the Pleistocene within the different species complexes. Earlier-diverging taxa were found on Borneo whilst later-diverging taxa had distributions centred in western Sundaland. Divergence between subspecies of later-diverging species complexes occurred >1 million years ago, overlapping with marine incursions on the Sunda Shelf. Javan populations showed comparatively high genetic differentiation from those on other Sundaic landmasses. T. amphrysis euthydemus (Fruhstorfer, 1913) syn. nov. is synonymized with T. amphrysus ruficollis (Butler, 1879) given the low divergence between these two species. We found genetic evidence of possible hidden species-level diversity within the species complexes Troides cuneifera Oberthür 1879 and Troides miranda Butler 1869, for which we recommend further taxonomic work. Together, these results provide a perspective on Triodes evolutionary dynamics and the role of Pleistocene glaciations in shaping patterns of insect diversity in Sundaland.
DOI: 10.15468/dl.ygsf3k
title: Occurrence Download

description: A dataset containing 422 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hesperis sylvestris"
 ]
}

 The dataset includes 422 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005461-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.twu2yc
title: Occurrence Download

description: A dataset containing 22321 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is North America",
 "TaxonKey is Anopheles"
 ]
}

 The dataset includes 22321 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005460-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.arq4gy
title: Occurrence Download

description: A dataset containing 607 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Heliophila carnosa"
 ]
}

 The dataset includes 607 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005463-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ywk9u6
title: Occurrence Download

description: A dataset containing 96 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mostacillastrum gracile"
 ]
}

 The dataset includes 96 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005464-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.stv2dx
title: Occurrence Download

description: A dataset containing 9473 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pimpinella saxifraga",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9473 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005462-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.abpkfd
title: Occurrence Download

description: A dataset containing 26490 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pueraria montana"
 ]
}

 The dataset includes 26490 records from 450 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005465-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/qkl28z
title: Results of the Search for eV-scale sterile neutrinos with 7.5 years of DeepCore data

description: Results of the Search for eV-scale sterile neutrinos with the DeepCore "golden" sample in machine readable format. Allows reproduction of Figure 5 of the publication.

&lt;ul&gt;
&lt;li&gt; The file "wilks_contour_90pct.csv" contains the 90% contour line in CSV format. The columns "U\mu4_sq" and "U\tau4_sq" correspond to the _squared_ elements of the 3+1 mixing matrix, |U_{&mu;4}|^2 and |U_{&tau;4}|^2, respectively. The contour was drawn assuming that Wilks' theorem holds with two degrees of freedom. The points are ordered by nearest neighbors. &lt;/li&gt;
&lt;li&gt; The file "expected_sensitivity_90pct.csv" contains the expected sensitivity at 90% CL of the analysis for Asimov data produced at the null hypothesis. The format is identical to that of the result. &lt;/li&gt;
&lt;li&gt; The files "marginalized_umu4_sq.csv" and "marginalized_utau4_sq.csv" contain the marginalized scan of the test statistic over the matrix elements. The column "Metric Difference" refers to the delta chi-square metric used in the analysis. Since this metric is a delta chi-square (rather than a likelihood), it should _not_ be multiplied by two when calculating significances. They allow reproduction of the top and right panels of Figure 5 of the publication. &lt;/li&gt;
&lt;li&gt; The file "real_data_wilks_contours_reprod_mar_2025_best_fit_points.tab" contains the best-fit values of all free nuisance parameters in a |U_{&mu;4}|^2 and |U_{&tau;4}|^2 scan. &lt;/li&gt;
&lt;li&gt; The file "real_data_wilks_contours_reprod_mar_2025_metric_diff.tab" contains the \chi^2 difference between the scan point and the global best-fit in a |U_{&mu;4}|^2 and |U_{&tau;4}|^2 scan. &lt;/li&gt;
&lt;/ul&gt;
DOI: 10.15468/dl.r33chb
title: Occurrence Download

description: A dataset containing 224 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Protea witzenbergiana"
 ]
}

 The dataset includes 224 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005468-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.83qhs6
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Setophaga virens)",
 "Country is one of (Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czechia, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Holy See, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard and Jan Mayen, Sweden, Switzerland, Ukraine, United Kingdom of Great Britain and Northern Ireland)"
 ]
}

 The dataset includes 29 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005471-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hvhfp4
title: Occurrence Download

description: A dataset containing 3229 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Kenya",
 "OccurrenceStatus is Present",
 "TaxonKey is Formicidae",
 "Year 2000-2023"
 ]
}

 The dataset includes 3229 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023109-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n6h4ue
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cerastium jiuhuashanense Gang Yao & J.W.Zhai"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0096541-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jk7q54
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Liparis amboinensis J.J.Sm."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010760-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.