cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10499868
title: Prefrontal Manifold Geometry Contributes to Reaction Time Variability

description: Spike counts from cells recorded from the Frontal Eye Fields (FEF) and dorso-lateral prefrontal cortex (DLPFC) of 2 non-human primates preforming a delayed memory saccade task. Each file contains spike counts for all cells aligned to either target onset, go-cue onset or movement (saccade) onset. The suffix 'raw' indicates whether the file contains raw spike counts, or spike counts normalized to the pre-fixation baseline. 

The data are stored in an HD5-based format for objects created with the Julia progamming language. The following code snippet shows how to load the data

 

```julia

using JLD2

ppsth,labels, trialidx, rtimes = JLD2.load("ppsth_fef_mov.jld2","ppsth", "labels","trialidx","rtimes")

```

Here, the variable `ppsth` contains the spike counts in `ppsth.counts`, the bins in `ppsth.bins`. The variable `labels` contains the label of the target shown for each trial and for each cell. Note that, `length(labels)==size(ppsth.counts,3)` is the number of cells and `length(labels[1])` is the number of correct trails for cell `. The variable `rtimes` contains the reaction time for each session used. The session name for each cell can be found by examining the variable `ppsth.cellnames`, where the name of each cell has the format "Animal/date/session/array/channel/cellid/", e.g. "J/20140904/session01/array01/channel001/cell01" denotes the first cell on the first channel of the first array recorded in the first session on 4th September 2014 from animal J.

In addition to spike counts, this dataset also contains processed data for producing the main figures in an upcoming manuscript. To reproduce the figures, first go to the paper's repository and follow the installation instructions. Then, download the data files to a 'data' sub-folder, and run the codes as instructed in the repository's README file.
DOI: 10.6084/m9.figshare.24999269
title: Relevant and required dataset for bovine circQTL research project

description: Relevant and required dataset for bovine circQTL research project
DOI: 10.6084/m9.figshare.24999269.v1
title: Relevant and required dataset for bovine circQTL research project

description: Relevant and required dataset for bovine circQTL research project
DOI: 10.26179/heb6-5r85
title: Casey and Wilkes Stations marine eDNA and sediment chemistry study
DOI: 10.5281/zenodo.10408454
title: Video-based training for meeting communication skills (supplementary material)

description: This repository contains supplementary material for the manuscript "Video-based training for meeting communication skills" published in 2024 International Conference on Software Engineering - Software Engineering Education and Training (ICSE-SEET):



anonymized_responses.xlsx: Questions used in the study reported in the paper (titles of columns) and anonymized data from participants (rows).
DOI: 10.5281/zenodo.10408455
title: Video-based training for meeting communication skills (supplementary material)

description: This repository contains supplementary material for the manuscript "Video-based training for meeting communication skills" published in 2024 International Conference on Software Engineering - Software Engineering Education and Training (ICSE-SEET):



anonymized_responses.xlsx: Questions used in the study reported in the paper (titles of columns) and anonymized data from participants (rows).
DOI: 10.5281/zenodo.10516021
title: Duplex Underplating, Sediment Dehydration and Quartz Vein Mineralization in the Deep Tremor Source Region

description: Data for Duplex Underplating, Sediment Dehydration and Quartz Vein Mineralization in the Deep Tremor Source Region
DOI: 10.5281/zenodo.8365191
title: Duplex Underplating, Sediment Dehydration and Quartz Vein Mineralization in the Deep Tremor Source Region

description: Data for Duplex Underplating, Sediment Dehydration and Quartz Vein Mineralization in the Deep Tremor Source Region
DOI: 10.5281/zenodo.8365192
title: Duplex Underplating, Sediment Dehydration and Quartz Vein Mineralization in the Deep Tremor Source Region

description: Data for Duplex Underplating, Sediment Dehydration and Quartz Vein Mineralization in the Deep Tremor Source Region
DOI: 10.5517/ccdc.csd.cc2g5p6k
title: CCDC 2269578: Experimental Crystal Structure Determination

description: Related Article: Müjgan Yaman, Cansu Renkli̇tepe, Gökhan Kaplan, Yilmaz Sakalli, Nurgül Seferoğlu, Ertan Şahi̇n, Zeynel Seferoğlu|2024|Dyes Pigm.|222|111840|doi:10.1016/j.dyepig.2023.111840
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gl6z8
title: CCDC 2281630: Experimental Crystal Structure Determination

description: Related Article: Feng Li, Qing Yang, Ming-Yue Liu, Pei-Xuan An, Ya-Long Du, Yan-Bo Wang|2023|J.Org.Chem.|89|304|doi:10.1021/acs.joc.3c02024
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gl70b
title: CCDC 2281631: Experimental Crystal Structure Determination

description: Related Article: Feng Li, Qing Yang, Ming-Yue Liu, Pei-Xuan An, Ya-Long Du, Yan-Bo Wang|2023|J.Org.Chem.|89|304|doi:10.1021/acs.joc.3c02024
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gl71c
title: CCDC 2281632: Experimental Crystal Structure Determination

description: Related Article: Feng Li, Qing Yang, Ming-Yue Liu, Pei-Xuan An, Ya-Long Du, Yan-Bo Wang|2023|J.Org.Chem.|89|304|doi:10.1021/acs.joc.3c02024
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10515752
title: Deciphering the isotopic imprint of nitrate to reveal nitrogen source and transport mechanisms in a tile-drained agroecosystem

description: This dataset provides data used in the manuscript "Deciphering the isotopic imprint of nitrate to reveal nitrogen source and transport mechanisms in a tile-drained agroecosystem". These data include the tile drainage measurements and results from the soil incubation experiment.
DOI: 10.6084/m9.figshare.24978669
title: <b>An Alpha-helical Lid Guides the Target DNA toward Catalysis in CRISPR-Cas12a</b>

description: The initial and final structure of CRISPR-Cas12a along the traversal of the target strand toward the RuvC active site. Data are provided in PDB format.
DOI: 10.6073/pasta/85daa83c2fe8e3079cce503b747a7255
title: High-frequency light attenuation measurements in 35 lakes: companion data from "Coefficients in Taylor’s Law increase with the time scale of water clarity measurements in a global suite of lakes"

description: Identifying the scaling rules describing ecological patterns across time and space is a central challenge in ecology. Taylor’s Law of fluctuation scaling, which states that the variance of a population is proportional to a positive power of the mean, has been widely observed in population dynamics and characterizes variability in multiple scientific domains. However, it is unclear if this phenomenon accurately describes ecological patterns across many orders of magnitude in time, and therefore links otherwise disparate observations. This dataset uses light attenuation observations from 10,531 days of high-frequency measurements in 35 globally distributed lakes to test this unknown. We focus on water clarity as an integrative ecological characteristic that responds to both biotic and abiotic drivers. We provide documentation that variations in ecological measurements across diverse sites and temporal scales exhibit variance patterns consistent with Taylor’s Law, and that model coefficients increase in a predictable yet non-linear manner with decreasing observation frequency.
DOI: 10.5281/zenodo.10516059
title: Genomic and functional diversity of the human-derived isolates of Faecalibacterium

description: Faecalibacterium is one of the most abundant bacteria in the gut microbiota of healthy adults, highly regarded as a next-generation probiotic. However, the functions of Faecalibacterium genomes from cultured strains and the distribution of different species in populations may differ among different sources. We here performed an extensive analysis of pan-genomes, functions, and safety evaluation of 136 Faecalibacterium genomes collected from 10 countries. The genomes are clustered into 11 clusters, with only five of them were characterized and validly nomenclated.
DOI: 10.5281/zenodo.10516060
title: Genomic and functional diversity of the human-derived isolates of Faecalibacterium

description: Faecalibacterium is one of the most abundant bacteria in the gut microbiota of healthy adults, highly regarded as a next-generation probiotic. However, the functions of Faecalibacterium genomes from cultured strains and the distribution of different species in populations may differ among different sources. We here performed an extensive analysis of pan-genomes, functions, and safety evaluation of 136 Faecalibacterium genomes collected from 10 countries. The genomes are clustered into 11 clusters, with only five of them were characterized and validly nomenclated.
DOI: 10.34740/kaggle/dsv/7410186
title: WallStreetBets 2022
DOI: 10.5519/qd.gh4h3e0h
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (90 records)
DOI: 10.5281/zenodo.10516057
title: BAM
DOI: 10.5281/zenodo.10516058
title: BAM
DOI: 10.17608/k6.auckland.24602901
title: HVN1904 MOVER Metadata Record - Musseling-up 2.0: Greenshell™ mussels for inflammation, metabolism and muscular skeletal function. Investigating the effect of long-term New Zealand green shell mussel powder consumption on promoting the recovery of muscle function following a bout of exercise-induced muscle damage to the quadriceps in untrained healthy males.

description: This metadata record and it's attached files make statements about the kinds of data collected as part of this research, and set out policies for governance of that data, now and in the future.<b>Description:</b> Prolonged and unaccustomed eccentric muscular work (like downhill walking) produces micro-structural damage to muscles resulting in inflammation and delayed soreness. Muscle damage from this exercise is associated with impaired muscle function (i.e. loss of muscle strength and mobility) and localised swelling/oedema. Although the mechanisms behind eccentric muscle damage are not precisely known, it is believed that along with initial mechanically induced disruption, secondary damage is caused by the inflammatory process and oxidative stress from inflammatory cells recruited to the site of injury. New Zealand green shell mussel (GSM) is rich in omega-3 fatty acids eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) which have been demonstrated to have anti-inflammatory properties. Green shell mussel contains additional bioactive components including glycosaminoglycans and other novel peptides and lipids that modulate inflammatory processes. Previous dietary intervention studies have reported the efficacy of New Zealand GSM to modulate key inflammatory factors leading to reduced soreness following exercise and improved lung function through reduced bronchoconstriction. These findings highlight the potential for New Zealand GSM supplementation to modulate exercise-induced inflammation and support recovery of muscle function following muscle damage. In this study, we seek to investigate the effect of long-term New Zealand GSM dietary supplementation in modulating inflammation and inflammatory pathways following exercise-induced muscle damage to the quadriceps. We will aim to examine whether any modulation in inflammation by GSM consumption leads to expedited recovery of musculo-skeletal performance following muscle damage.
DOI: 10.17608/k6.auckland.24602901.v1
title: HVN1904 MOVER Metadata Record - Musseling-up 2.0: Greenshell™ mussels for inflammation, metabolism and muscular skeletal function. Investigating the effect of long-term New Zealand green shell mussel powder consumption on promoting the recovery of muscle function following a bout of exercise-induced muscle damage to the quadriceps in untrained healthy males.

description: This metadata record and it's attached files make statements about the kinds of data collected as part of this research, and set out policies for governance of that data, now and in the future.<b>Description:</b> Prolonged and unaccustomed eccentric muscular work (like downhill walking) produces micro-structural damage to muscles resulting in inflammation and delayed soreness. Muscle damage from this exercise is associated with impaired muscle function (i.e. loss of muscle strength and mobility) and localised swelling/oedema. Although the mechanisms behind eccentric muscle damage are not precisely known, it is believed that along with initial mechanically induced disruption, secondary damage is caused by the inflammatory process and oxidative stress from inflammatory cells recruited to the site of injury. New Zealand green shell mussel (GSM) is rich in omega-3 fatty acids eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) which have been demonstrated to have anti-inflammatory properties. Green shell mussel contains additional bioactive components including glycosaminoglycans and other novel peptides and lipids that modulate inflammatory processes. Previous dietary intervention studies have reported the efficacy of New Zealand GSM to modulate key inflammatory factors leading to reduced soreness following exercise and improved lung function through reduced bronchoconstriction. These findings highlight the potential for New Zealand GSM supplementation to modulate exercise-induced inflammation and support recovery of muscle function following muscle damage. In this study, we seek to investigate the effect of long-term New Zealand GSM dietary supplementation in modulating inflammation and inflammatory pathways following exercise-induced muscle damage to the quadriceps. We will aim to examine whether any modulation in inflammation by GSM consumption leads to expedited recovery of musculo-skeletal performance following muscle damage.
DOI: 10.5281/zenodo.10183263
title: Manually Labeled RGB, LWIR, and RGB-LWIR Images of Cars and Trucks for Multispectral Automated Transfer Technique (MATT) Research
DOI: 10.5281/zenodo.10183264
title: Manually Labeled RGB, LWIR, and RGB-LWIR Images of Cars and Trucks for Multispectral Automated Transfer Technique (MATT) Research
DOI: 10.5281/zenodo.10183331
title: Segmented RGB, LWIR, and RGB-LWIR Images of Cars and Trucks for Multispectral Automated Transfer Technique (MATT) Research
DOI: 10.5281/zenodo.10183330
title: Segmented RGB, LWIR, and RGB-LWIR Images of Cars and Trucks for Multispectral Automated Transfer Technique (MATT) Research
DOI: 10.15784/601760
title: Amino acid nitrogen isotope values of modern and ancient Adélie penguin eggshells from the Ross Sea and Antarctic Peninsula regions

description: This data set contains measurements of nitrogen (δ15N) stable isotope values of twelve individual amino acids from modern and excavated eggshell of Adélie penguins (Pygoscelis adelidae) from multiple sites around the Antarctic Peninsula and Ross Sea regions of Antarctica. Stable isotope analyses were conducted using a gas chromatograph coupled to a continuous flow stable isotope ratio mass spectrometer. Radiocarbon dates of excavated eggshells were estimated using accelerator Mass Spectrometry (AMS) on bone, feather, and egg membrane tissues from the same ornithogenic layer as the eggshell and were completed at the Rafter Radiocarbon Laboratory and New Zealand (NZA), Beta Analytic, Inc. (Beta). All dates were corrected for the marine carbon reservoir effect and calibrated to calendar years before present (cal years BP) using a ΔR of 750 ± 50 years and the MARINE13 calibration curve in Calib 7.0 (2σ range). 

This data set indexes each individually analyzed eggshell sample with site (location), latitude, longitude, tissue used from radiocarbon dating, age of the sample, and nitrogen stable isotope values of individual amino acids. Details of the data set and all relevant methods are provided in Michelson et al. 2023 Limnol. Oceanogr. DOI:10.1002/lno.12446
DOI: 10.15784/601761
title: Stable isotopes of Oxygen and Carbon in Adamissium colbecki from Explorers Cove and Bay of Sails

description: This dataset contains stable isotopes of carbon and oxygen sampled from 6 adult and 2 juvenile Adamussium colbecki valves. Three of the adults were collected live from Bay of Sails. Three of the adults and the two juveniles were collected from Explorers Cove.
DOI: 10.5281/zenodo.10183340
title: YOLOv8 Manual and MATT Model Weights for RGB, LWIR, and RGB-LWIR Images
DOI: 10.5281/zenodo.10183341
title: YOLOv8 Manual and MATT Model Weights for RGB, LWIR, and RGB-LWIR Images
DOI: 10.5517/ccdc.csd.cc2glv20
title: CCDC 2282222: Experimental Crystal Structure Determination

description: Related Article: Guoqin Luo, Shunlin Zhang, Shun-Long Zhang, Dan Zhou, Chao Huang, Dongmei Chen, Bixue Zhu, Jie Yang, Lei Shen|2024|J.Mol.Struct.|1299|137145|doi:10.1016/j.molstruc.2023.137145
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gnkf4
title: CCDC 2283876: Experimental Crystal Structure Determination

description: Related Article: Ganesh Kumar Dhandabani, Palaniraja Jeyakannu, Chia-Ling Shih, Aksa Mariyam Abraham, Gopal Chandru Senadi, Jeh-Jeng Wang|2023|J.Org.Chem.|89|719|doi:10.1021/acs.joc.3c01820
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gnkh6
title: CCDC 2283878: Experimental Crystal Structure Determination

description: Related Article: Ganesh Kumar Dhandabani, Palaniraja Jeyakannu, Chia-Ling Shih, Aksa Mariyam Abraham, Gopal Chandru Senadi, Jeh-Jeng Wang|2023|J.Org.Chem.|89|719|doi:10.1021/acs.joc.3c01820
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gpbbv
title: CCDC 2284617: Experimental Crystal Structure Determination

description: Related Article: Mannar R. Maurya, Monojit Nandi, Pankaj Kumar Chaudhary, Sain Singh, Fernando Avecilla, Ramasare Prasad, Kaushik Ghosh|2023|Inorg.Chem.|63|714|doi:10.1021/acs.inorgchem.3c03665
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gpbcw
title: CCDC 2284618: Experimental Crystal Structure Determination

description: Related Article: Mannar R. Maurya, Monojit Nandi, Pankaj Kumar Chaudhary, Sain Singh, Fernando Avecilla, Ramasare Prasad, Kaushik Ghosh|2023|Inorg.Chem.|63|714|doi:10.1021/acs.inorgchem.3c03665
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gpbdx
title: CCDC 2284619: Experimental Crystal Structure Determination

description: Related Article: Mannar R. Maurya, Monojit Nandi, Pankaj Kumar Chaudhary, Sain Singh, Fernando Avecilla, Ramasare Prasad, Kaushik Ghosh|2023|Inorg.Chem.|63|714|doi:10.1021/acs.inorgchem.3c03665
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gpbfy
title: CCDC 2284620: Experimental Crystal Structure Determination

description: Related Article: Mannar R. Maurya, Monojit Nandi, Pankaj Kumar Chaudhary, Sain Singh, Fernando Avecilla, Ramasare Prasad, Kaushik Ghosh|2023|Inorg.Chem.|63|714|doi:10.1021/acs.inorgchem.3c03665
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gpbgz
title: CCDC 2284621: Experimental Crystal Structure Determination

description: Related Article: Mannar R. Maurya, Monojit Nandi, Pankaj Kumar Chaudhary, Sain Singh, Fernando Avecilla, Ramasare Prasad, Kaushik Ghosh|2023|Inorg.Chem.|63|714|doi:10.1021/acs.inorgchem.3c03665
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gqrcb
title: CCDC 2285982: Experimental Crystal Structure Determination

description: Related Article: Zhipeng Lin, João C. A. Oliveira, Alexej Scheremetjew, Lutz Ackermann|2023|J.Am.Chem.Soc.|146|228|doi:10.1021/jacs.3c08479
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.