cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.expjb4
title: Occurrence Download

description: A dataset containing 105 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is Russian Federation",
 "Geometry POLYGON((131.76737 43.086,131.66454 43.00323,131.7114 42.89175,131.84678 42.86504,131.99127 42.95943,131.96394 43.03845,131.89495 43.07935,131.7843 43.09931,131.76737 43.086))",
 "OccurrenceStatus is Present",
 "TaxonKey is Quercus mongolica",
 "Year 2015-2026"
 ]
}

 The dataset includes 105 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015645-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18501246
title: Population genomics of Nigerian goat breeds and neighbouring populations in the West Africa–Cameroon transboundary livestock corridor

description: This Zenodo deposit accompanies the manuscript by providing the analysis scripts and the derived outputs needed to reproduce the figures/tables from the processed genotype dataset (not included here).

The `script/` directory contains the R scripts used for each analysis step: preprocessing/admixture, PCA, FST, TreeMix, ALDER-based admixture timing, LD-based Ne (SNeP), ROH, phasing/DCMS scans, DCMS annotation, and GO analysis. The `results/` directory contains the corresponding final exported outputs (manuscript-ready figures and supplementary tables), organized by analysis module.

What is excluded: this deposit does not include genotype data, large intermediate files (e.g., PLINK binaries, per-chromosome VCFs, phased haplotypes, temporary log files), or any materials that could be restricted by data-sharing agreements. External executables and third-party tools used to run parts of the pipeline (e.g., PLINK, ADMIXTURE, ALDER, SNeP, selscan, Beagle, bcftools/tabix/bgzip, and helper Python scripts). Users should install those dependencies separately and follow their original licenses/citation requirements.
DOI: 10.5281/zenodo.18501247
title: Population genomics of Nigerian goat breeds and neighbouring populations in the West Africa–Cameroon transboundary livestock corridor

description: This Zenodo deposit accompanies the manuscript by providing the analysis scripts and the derived outputs needed to reproduce the figures/tables from the processed genotype dataset (not included here).

The `script/` directory contains the R scripts used for each analysis step: preprocessing/admixture, PCA, FST, TreeMix, ALDER-based admixture timing, LD-based Ne (SNeP), ROH, phasing/DCMS scans, DCMS annotation, and GO analysis. The `results/` directory contains the corresponding final exported outputs (manuscript-ready figures and supplementary tables), organized by analysis module.

What is excluded: this deposit does not include genotype data, large intermediate files (e.g., PLINK binaries, per-chromosome VCFs, phased haplotypes, temporary log files), or any materials that could be restricted by data-sharing agreements. External executables and third-party tools used to run parts of the pipeline (e.g., PLINK, ADMIXTURE, ALDER, SNeP, selscan, Beagle, bcftools/tabix/bgzip, and helper Python scripts). Users should install those dependencies separately and follow their original licenses/citation requirements.
DOI: 10.15468/dl.esz96x
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rajella nigerrima"
 ]
}

 The dataset includes 59 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015647-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.csa9ut
title: Occurrence Download

description: A dataset containing 127143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Armadillidium vulgare",
 "BasisOfRecord is Human Observation",
 "Year is greater than or equal to 1990",
 "Year is less than or equal to 2026"
 ]
}

 The dataset includes 127143 records from 302 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015601-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31112716
title: SMC-LUD: Liver Ultrasound Dataset (HCC vs Hemangioma)

description: The dataset consists of 5,466 anonymized 2D B-mode ultrasound images categorized into two classes. The distribution of images for training and testing is detailed in [Table 1].The full dataset, including class labels and metadata, is publicly available in a data repository under a CC-BY license. It is organized into two main directories according to class: hepatocellular carcinoma (HCC), hemangioma. Within each class directory, images are further grouped by patients, with each patient assigned a unique subdirectory containing all associated ultrasound images.<br><b>The dataset generated and analyzed during the current study is publicly available for non-commercial research use only, in consideration of patient privacy. This study was approved by the Data Review Board of Samsung Medical Center (SMC) (DRB No. 2025-0111).</b><br><b>Table 1. Dataset Classes</b><b>Diagnosis</b><b>Subgroup</b><b>No. of Patients</b><b>No. of Images</b><b>Train</b><b>Validation</b><b>Test</b><b>Hemangioma</b><b>Clean</b><b>323</b><b>1,267</b><b>886</b><b>253</b><b>128</b>Caliper3741,402<br><br><br>Subtotal4222,669<br><br><br><b>HCC</b><b>Clean</b><b>421</b><b>1,389</b><b>972</b><b>277</b><b>178</b>Caliper5571,327<br><br><br>Subtotal6002,716<br><br><br><b>Clean (Trained)</b><b>744</b><b>2,656</b><b>1,858</b><b>530</b><b>306</b>Total<br>1,0215,3853,7691,076540<br>A metadata file in CSV format is provided, containing the following columns: patient_id, image_filename, class_label, and additional clinical or acquisition metadata as available. Each row in the CSV file corresponds to a single image and provides the relevant annotation and metadata.<b>Table 2. Patient and Tumor Characteristics</b><b>Characteristic</b><b>HCC (patients=600)</b><b>Hemangioma (patients=421)</b><b><i>Demographics</i></b>Age, years66.65 ± 11.02 (20–90)55.50 ± 12.76 (30–90)Sex, male491 (81.8%)174 (41.3%)Sex, female109 (18.2%)247 (58.7%)Height, cm163.57 ± 16.39163.72 ± 8.45Weight, kg67.44 ± 11.24 (42–104)63.85 ± 12.95 (34–118)<b><i>Tumor characteristics</i></b>Max diameter, cm2.90/2.10/4.50(Median/Q1/Q3)–<b><i>UICC stage (2000)</i></b>pT158 (9.7%)–pT2120 (20.0%)–pT3353 (58.8%)–pT469 (11.5%)–<b><i>AJCC stage (2010)</i></b>pT1164 (27.3%)–pT2393 (65.5%)–pT322 (3.7%)–pT421 (3.5%)–<br>
DOI: 10.6084/m9.figshare.31112716.v3
title: SMC-LUD: Liver Ultrasound Dataset (HCC vs Hemangioma)

description: The dataset consists of 5,466 anonymized 2D B-mode ultrasound images categorized into two classes. The distribution of images for training and testing is detailed in [Table 1].The full dataset, including class labels and metadata, is publicly available in a data repository under a CC-BY license. It is organized into two main directories according to class: hepatocellular carcinoma (HCC), hemangioma. Within each class directory, images are further grouped by patients, with each patient assigned a unique subdirectory containing all associated ultrasound images.<br><b>The dataset generated and analyzed during the current study is publicly available for non-commercial research use only, in consideration of patient privacy. This study was approved by the Data Review Board of Samsung Medical Center (SMC) (DRB No. 2025-0111).</b><br><b>Table 1. Dataset Classes</b><b>Diagnosis</b><b>Subgroup</b><b>No. of Patients</b><b>No. of Images</b><b>Train</b><b>Validation</b><b>Test</b><b>Hemangioma</b><b>Clean</b><b>323</b><b>1,267</b><b>886</b><b>253</b><b>128</b>Caliper3741,402<br><br><br>Subtotal4222,669<br><br><br><b>HCC</b><b>Clean</b><b>421</b><b>1,389</b><b>972</b><b>277</b><b>178</b>Caliper5571,327<br><br><br>Subtotal6002,716<br><br><br><b>Clean (Trained)</b><b>744</b><b>2,656</b><b>1,858</b><b>530</b><b>306</b>Total<br>1,0215,3853,7691,076540<br>A metadata file in CSV format is provided, containing the following columns: patient_id, image_filename, class_label, and additional clinical or acquisition metadata as available. Each row in the CSV file corresponds to a single image and provides the relevant annotation and metadata.<b>Table 2. Patient and Tumor Characteristics</b><b>Characteristic</b><b>HCC (patients=600)</b><b>Hemangioma (patients=421)</b><b><i>Demographics</i></b>Age, years66.65 ± 11.02 (20–90)55.50 ± 12.76 (30–90)Sex, male491 (81.8%)174 (41.3%)Sex, female109 (18.2%)247 (58.7%)Height, cm163.57 ± 16.39163.72 ± 8.45Weight, kg67.44 ± 11.24 (42–104)63.85 ± 12.95 (34–118)<b><i>Tumor characteristics</i></b>Max diameter, cm2.90/2.10/4.50(Median/Q1/Q3)–<b><i>UICC stage (2000)</i></b>pT158 (9.7%)–pT2120 (20.0%)–pT3353 (58.8%)–pT469 (11.5%)–<b><i>AJCC stage (2010)</i></b>pT1164 (27.3%)–pT2393 (65.5%)–pT322 (3.7%)–pT421 (3.5%)–<br>
DOI: 10.6084/m9.figshare.31112716.v2
title: SMC-LUD: Liver Ultrasound Dataset (HCC vs Hemangioma)

description: The dataset consists of 5,466 anonymized 2D B-mode ultrasound images categorized into two classes. The distribution of images for training and testing is detailed in [Table 1].The full dataset, including class labels and metadata, is publicly available in a data repository under a CC-BY license. It is organized into two main directories according to class: hepatocellular carcinoma (HCC), hemangioma. Within each class directory, images are further grouped by patients, with each patient assigned a unique subdirectory containing all associated ultrasound images.A metadata file in CSV format is provided, containing the following columns: patient_id, image_filename, class_label, and additional clinical or acquisition metadata as available. Each row in the CSV file corresponds to a single image and provides the relevant annotation and metadata.
DOI: 10.15468/dl.nvn5gc
title: Occurrence Download

description: A dataset listing the 83 species recorded in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Sinocyclocheilus"
 ]
}

 The dataset's 83 records were derived from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015635-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18501427
title: Adaptive Learning Dataset
DOI: 10.5281/zenodo.18501426
title: Adaptive Learning Dataset
DOI: 10.15468/dl.nss4kd
title: Occurrence Download

description: A dataset containing 51865 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "HasCoordinate is true",
 "Year is greater than or equal to 2005",
 "Year is less than or equal to 2009",
 "Geometry POLYGON((-25.0 69.0, 45.0 69.0, 45.0 72.0, -25.0 72.0, -25.0 69.0))"
 ]
}

 The dataset includes 51865 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015629-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18501399
title: media planning and budget allocation campaigns

description: This dataset supports the research findings of the article titled "An Ensemble Deep Reinforcement Learning Framework for Multi-Channel Advertising Budget Optimization: A Practical AI Approach". Access to the dataset is restricted. Interested researchers may request access via Zenodo and will be granted permission upon approval by the corresponding author for academic or non-commercial use only.
DOI: 10.5281/zenodo.15267452
title: media planning and budget allocation campaigns

description: This dataset supports the research findings of the article titled "An Ensemble Deep Reinforcement Learning Framework for Multi-Channel Advertising Budget Optimization: A Practical AI Approach". Access to the dataset is restricted. Interested researchers may request access via Zenodo and will be granted permission upon approval by the corresponding author for academic or non-commercial use only.
DOI: 10.15468/dl.sf9zw3
title: Occurrence Download

description: A dataset containing 163 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((111.357 21.461,115.422 21.461,115.422 24.392,111.357 24.392,111.357 21.461))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Boiga multomaculata"
 ]
}

 The dataset includes 163 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015649-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ecg3p4
title: Occurrence Download

description: A dataset containing 105 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is Russian Federation",
 "Geometry POLYGON((131.76737 43.086,131.66454 43.00323,131.7114 42.89175,131.84678 42.86504,131.99127 42.95943,131.96394 43.03845,131.89495 43.07935,131.7843 43.09931,131.76737 43.086))",
 "OccurrenceStatus is Present",
 "TaxonKey is Quercus mongolica",
 "Year 2015-2026"
 ]
}

 The dataset includes 105 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015651-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.chx9t8
title: Occurrence Download

description: A dataset containing 53012 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saxifraga rotundifolia"
 ]
}

 The dataset includes 53012 records from 417 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015622-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tbdayj
title: Occurrence Download

description: A dataset containing 6883 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Boletus pinophilus"
 ]
}

 The dataset includes 6883 records from 154 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015653-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3fb3bg
title: Occurrence Download

description: A dataset containing 65595 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hypericum perforatum)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 65595 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015632-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ptuuh8
title: Occurrence Download

description: A dataset containing 11234 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hypericum tetrapterum, Hypericum quadrangulum, Hypericum quadrangulum, Hypericum acutum, Hypericum acutum)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 11234 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015654-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3qpwdd
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "License is CC0 1.0",
 "TaxonKey is Fusarium oxysporum cubense"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015655-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xy2cyz
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "Geometry POLYGON((-77.08251 8.32669,-77.08282 8.30643,-77.06917 8.30526,-77.07128 8.32558,-77.08251 8.32669))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 15 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015656-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rhgwn5
title: Occurrence Download

description: A dataset containing 142 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hypochaeris glabra, Hypochaeris glabra, Hypochaeris glabra)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 142 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015657-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6jyzx7
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "License is CC0 1.0",
 "TaxonKey is Fusarium oxysporum cubense"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015658-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a4uxpv
title: Occurrence Download

description: A dataset containing 1545 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hypochaeris maculata)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 1545 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015659-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.drwjjv
title: Occurrence Download

description: A dataset containing 1845 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.2_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Turdus mandarinus",
 "Year is 2022"
 ]
}

 The dataset includes 1845 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015662-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.af9jmj
title: Occurrence Download

description: A dataset containing 605971 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Peromyscus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 605971 records from 228 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015642-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7wcwbk
title: Occurrence Download

description: A dataset containing 23957 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hypochaeris radicata)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 23957 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015664-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18501408
title: Data and code for: Extreme heat and humidity reduce the recreational value of urban green spaces

description: Anonymized choice experiment data, aggregated travel cost variables, urban green space attributes, and processed meteorological data used in this study.
DOI: 10.5281/zenodo.18501407
title: Data and code for: Extreme heat and humidity reduce the recreational value of urban green spaces

description: Anonymized choice experiment data, aggregated travel cost variables, urban green space attributes, and processed meteorological data used in this study.
DOI: 10.15468/dl.a3cryf
title: Occurrence Download

description: A dataset containing 689 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hypochaeris uniflora, Hypochaeris uniflora, Hypochaeris uniflora)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 689 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015665-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.