cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4557191
title: Unmanned Aerial Vehicle (UAV) data acquired over a subtropical forest area of the UFSM campus Frederico Westphalen, at February 18, 2021, Rio Grande do Sul, Brazil

description: Title: Unmanned Aerial Vehicle (UAV) data acquired over a subtropical forest area of the UFSM campus Frederico Westphalen, on February 18, 2021, Rio Grande do Sul, Brazil Data description: The data were acquired from an aerial survey conducted with an Unmanned Aerial Vehicle (UAV, also <em>Drone</em>) covering a forest area of the Federal University of Santa Maria – UFSM in the municipality of Frederico Westphalen, in the Rio Grande do Sul, Brazil (Figure 1). The climate of the region is subtropical (Cfa in the Köppen-Geiger classification) with an average annual temperature of 18 °C and annual precipitation of 1919 mm (Alvares et al., 2013). The rainfall is well distributed throughout the year. Figure 1. Location of the site of data acquisition. Based on Google Earth Pro scenes. The KML and KMZ are appended to the files. UAV and camera settings for the acquisition (Specifications Table): Parameters Specification/value Date (YYYYMMDD): 20210218 Time of day (BRT = -3) 10:30 h a.m. UAV – Drone - Camera Matrice 100 (X3 and Sequoia Parrot – Multispectral and RGB) Fly high (meters above ground) 250 m View angle 90° automatic mode. Sky conditions ( x ) Clear sky ( ) Low cloud coverage (some clouds) ( ) Completely cloudy Wind condition ( x ) no wind ( ) Low speed ( ) High-speed wind Approximate data acquisition duration 30 minutes Total of photographs acquired X3 215; Sequoia Multi 1776+1236; Sequoia RGB 444+309 Across track coverage 80% Cross-track coverage 80% Fly planning software Pix4D Capture (₢) For more information contact: Fábio Marcelo Breunig, breunig@ufsm.br An example of the mosaic is showed below (Figure 2), referring to a screen capture of Agisoft Metashape (Agisoft LLC, 11 Degtyarniy per., St. Petersburg, Russia, 191144) and, the workflow adopted. Figure 2. The capture of an orthomosaic and processing workflow of X3 camera. References to the main project/publications: Breunig, Fabio Marcelo. CONESAT – Monitoring the CONESUL using remote sensing data. Project. Federal University of Santa Maria, Campus of Frederico Westphalen. Brazil. Available at: &lt;https://www.researchgate.net/project/CONESAT-Monitoring-the-CONESUL-using-remote-sensing-data&gt;. Breunig, Fabio Marcelo. Integration of multiscale remote sensing data in the precision agriculture and silviculture (in Portuguese: Integração de dados multiescala de sensoriamento remoto na agricultura e silvicultura de precisão). Project. National Council for Scientific and Technological Development (CNPq). Grant 113769/2018-0 Breunig, Fabio Marcelo. Combination of UAV, PlanetScope, Landsat and Sentinel-2 images to precision silviculture and agriculture in a subtropical region (in Portuguese: Combinação de imagens de VANT, PlanetScope, Landsat e Sentinal-2 para a silvicultura e agricultura de precisão em uma região subtropical). Project of the National Council for Scientific and Technological Development (CNPq). Grant 305084/2020-8
DOI: 10.5281/zenodo.4461394
title: DICOM images of abdomen CT phantom in axial, helicoid, iterative and dual energy scans.

description: The two ZIP files contain the images of a CT phantom of abdomen. DualEnergy.zip contains files of acquisition at 80 kVp and 140 kVp. The second file HelicalAxialIterative.zip contains acquisition done in axial, helicoidal (aka spiral) and iterative reconstruction (Saphire) modes. Axial images have AbdSeq in the name, Helicoidal have Abdomen and B in the filter name, Iterative have Abdomen and I in the filter name. You can compare Exposure in mAs for each acquisition modality, how it diminishes from sequential/helicoidal/axial through helicoidal/spiral to iterative. This scanner if programmed with iterative acquisition can still reduce exposure from helicoidal scan. The acquisition was done on Siemens-Healthineers Somatom Confidence CT scanner. Antonio Ortiz Lora antonio.ortiz.lora.sspa@juntadeandalucia.es Marcin Balcerzyk mbalcerzyk@us.es
DOI: 10.5281/zenodo.4455630
title: Establishing diversity in synthetic time series for prediction performance evaluation

description: This dataset enables practitioners to evaluate their time series prediction algorithms on various types of time series
DOI: 10.6084/m9.figshare.21865206
title: Biotic resistance to fish invasions in southern China: evidence from biomass, habitat, and fertility limitation

description: Lab experiment data of the manuscript
DOI: 10.6084/m9.figshare.21865206.v1
title: Biotic resistance to fish invasions in southern China: evidence from biomass, habitat, and fertility limitation

description: Lab experiment data of the manuscript
DOI: 10.6084/m9.figshare.21865203
title: Biotic resistance to fish invasions in southern China: evidence from biomass, habitat, and fertility limitation

description: Field survey data of the manuscript
DOI: 10.6084/m9.figshare.21865203.v1
title: Biotic resistance to fish invasions in southern China: evidence from biomass, habitat, and fertility limitation

description: Field survey data of the manuscript
DOI: 10.5281/zenodo.5076517
title: Preliminary displacement analyses over Surfside Florida KMZ file pointing to REST URL

description: <em><strong>Preliminary displacement analyses over Surfside Florida. KMZ file pointing to REST URL. The file can be opened in Google Earth Pro and will allow overlaying displacement results with Google's temporal optical imagery catalog. Contains modified Copernicus Sentinel-1 data. Persistent Scatterers Interferometry (PSI) was performed using SARscape v5.6.</strong></em>
DOI: 10.5281/zenodo.5076516
title: Preliminary displacement analyses over Surfside Florida KMZ file pointing to REST URL

description: <em><strong>Preliminary displacement analyses over Surfside Florida. KMZ file pointing to REST URL. The file can be opened in Google Earth Pro and will allow overlaying displacement results with Google's temporal optical imagery catalog. Contains modified Copernicus Sentinel-1 data. Persistent Scatterers Interferometry (PSI) was performed using SARscape v5.6.</strong></em>
DOI: 10.5281/zenodo.7383179
title: SMM Thesis Results 2022

description: SMM Results
DOI: 10.5281/zenodo.7383178
title: SMM Thesis Results 2022

description: SMM Results
DOI: 10.34740/kaggle/dsv/4839025
title: Distrinet-CIC-IDS2017
DOI: 10.6084/m9.figshare.21829692
title: Exploring the metabolic basis of growth/defense tradeoffs in complex environments with Nicotiana attenuata plants co-silenced in NaMYC2a/b expression (Raw data)

description: Exploring the metabolic basis of growth/defense tradeoffs in complex environments with Nicotiana attenuata plants co-silenced in NaMYC2a/b expression
DOI: 10.6084/m9.figshare.21829692.v1
title: Raw data of Exploring the metabolic basis of growth/defense tradeoffs in complex environments with Nicotiana attenuata plants co-silenced in NaMYC2a/b expression .zip

description: Exploring the metabolic basis of growth/defense tradeoffs in complex environments with Nicotiana attenuata plants co-silenced in NaMYC2a/b expression
DOI: 10.5281/zenodo.7525564
title: Similar effect of running on visual and auditory time perception in the ranges of milliseconds and seconds

description: This is the dataset related to the article:"Similar effect of running on visual and auditory time perception in the ranges of milliseconds and seconds" The file contains subjects data for the four tested conditions sub_ID is the participant's identification number Condition is the Condition of the Experiment they took part to PSE indicates the Point of Subjective Equality for the Specified Condition WeberFr indicates the Weber Fraction of the PSE in the adjacent column Heart rate indicates participants average heart rate for each given condition
DOI: 10.5281/zenodo.7525563
title: Similar effect of running on visual and auditory time perception in the ranges of milliseconds and seconds

description: This is the dataset related to the article:"Similar effect of running on visual and auditory time perception in the ranges of milliseconds and seconds" The file contains subjects data for the four tested conditions sub_ID is the participant's identification number Condition is the Condition of the Experiment they took part to PSE indicates the Point of Subjective Equality for the Specified Condition WeberFr indicates the Weber Fraction of the PSE in the adjacent column Heart rate indicates participants average heart rate for each given condition
DOI: 10.5258/soton/wp00753
title: Nigeria 100m building class, version 1.0

description: Gridded maps of residential/non-residential building classifications and associated building patterns for Nigeria (NGA), version 1.0.
DOI: 10.5281/zenodo.7525567
title: Supplementary Table 2

description: Core microbiome of three different types of reactors, coming from anaerobic digestion samples.
DOI: 10.5281/zenodo.7525566
title: Supplementary Table 2

description: Core microbiome of three different types of reactors, coming from anaerobic digestion samples.
DOI: 10.5281/zenodo.7525558
title: Combined in vitro and cell-based selection display method producing specific binders against IL-9 receptor in high yields

description: The FEBS Journal FJ-22-0728 Combined in vitro and cell-based selection display method producing specific binders against IL-9 receptor in high yields Maroš Huličiak, Lada Biedermanová, Daniel Berdár, Štěpán Herynek, Lucie Kolářová,<br> Jakub Tomala, Pavel Mikulecký, and Bohdan Schneider <em>Institute of Biotechnology of the Czech Academy of Sciences,<br> Průmyslová 595, 252 50 Vestec, Czech Republic</em> Correspondence: Bohdan Schneider, Institute of Biotechnology of the Czech Academy of Sciences,<br> BIOCEV, CZ-252 50 Vestec, Czech Republic,<br> Tel: +420 728 303 566, e-mail: bohdan.schneider@ibt.cas.cz Abstract We combined cell-free ribosome display and cell-based yeast display selection to build specific protein binders to the extracellular domain of the human interleukin 9 receptor alpha (IL-9Rα). The target, IL-9Rα, is the receptor involved in the signaling pathway of IL-9, a pro-inflammatory cytokine medically important for its involvement in respiratory diseases. The successive use of modified protocols of ribosome and yeast displays allowed us to combine their strengths - the virtually infinite selection power of ribosome display and the production of (mostly) properly folded and soluble proteins in yeast display. The described experimental protocol is optimized to produce binders highly specific to the target, including selectivity to common proteins such as BSA, and proteins potentially competing for the binder such as receptors of other cytokines. The binders were trained from DNA libraries of two protein scaffolds called 57aBi and 57bBi developed in our laboratory. We show that the described unconventional combination of ribosome and yeast displays is effective in developing selective small protein binders to the medically relevant molecular target.
description: supplemental material to The FEBS Journal FJ-22-0728
DOI: 10.5281/zenodo.7525557
title: Combined in vitro and cell-based selection display method producing specific binders against IL-9 receptor in high yields

description: The FEBS Journal FJ-22-0728 Combined in vitro and cell-based selection display method producing specific binders against IL-9 receptor in high yields Maroš Huličiak, Lada Biedermanová, Daniel Berdár, Štěpán Herynek, Lucie Kolářová,<br> Jakub Tomala, Pavel Mikulecký, and Bohdan Schneider <em>Institute of Biotechnology of the Czech Academy of Sciences,<br> Průmyslová 595, 252 50 Vestec, Czech Republic</em> Correspondence: Bohdan Schneider, Institute of Biotechnology of the Czech Academy of Sciences,<br> BIOCEV, CZ-252 50 Vestec, Czech Republic,<br> Tel: +420 728 303 566, e-mail: bohdan.schneider@ibt.cas.cz Abstract We combined cell-free ribosome display and cell-based yeast display selection to build specific protein binders to the extracellular domain of the human interleukin 9 receptor alpha (IL-9Rα). The target, IL-9Rα, is the receptor involved in the signaling pathway of IL-9, a pro-inflammatory cytokine medically important for its involvement in respiratory diseases. The successive use of modified protocols of ribosome and yeast displays allowed us to combine their strengths - the virtually infinite selection power of ribosome display and the production of (mostly) properly folded and soluble proteins in yeast display. The described experimental protocol is optimized to produce binders highly specific to the target, including selectivity to common proteins such as BSA, and proteins potentially competing for the binder such as receptors of other cytokines. The binders were trained from DNA libraries of two protein scaffolds called 57aBi and 57bBi developed in our laboratory. We show that the described unconventional combination of ribosome and yeast displays is effective in developing selective small protein binders to the medically relevant molecular target.
description: supplemental material to The FEBS Journal FJ-22-0728
DOI: 10.6084/m9.figshare.21803292
title: Scans of film damage

description: Empty scans of 35mm film frames with artifacts. Emulsion: Lomochrome Purple Development process: C41 Scanner: Plustek OpticFilm 7600i Scanning software: Silverfast 9 Scanning DPI: 300 Scanned to 16-bit B&W tiff and converted to JPG using Lightroom with no compression. We manually annotate individual artifacts in the scans with<br> bounding polygons, and classify each as dirt, dust, long hair, short hair or scratch. We extract each individual artifact, zero padded to square, to create a bank of isolated artifacts to sample from when generating new overlays. In total we have annotated 12135 artifacts across the 10 scanned frames. Annotations for each scan are included in JSON format, and can easily be converted to OpenCV contour format. <br>
DOI: 10.6084/m9.figshare.21803370
title: Manually restored damaged film scans

description: Manually restored scans of 35mm film of a variety of colour emulsions, including slides and negatives. The restored damage includes dust, scratches, hairs, and specks, and the original damaged scans can be found in "Authentically damaged film scans"<br> <br> <br> All 44 scans contributed and manually restored by by d@analog.cafe.
DOI: 10.6084/m9.figshare.21815844
title: Damaged Documerica

description: This dataset includes Documerica film scans obtained via the Flickr API. For each Documerica image, we provide a damage mask generated by our model from "Simulating analog film damage to analyse and improve artifact restoration on high-resolution scans", and the resulting damaged version of the image.
DOI: 10.25838/d5p-40
title: A simple Illumina mRNA-Seq data pre-processing and analysis pipeline for well-annotated plants

description: This is an easy-to-follow protocol for pre-processing Illumina mRNA-Seq data, alignment and quantification including basic data analyses in RStudio.
DOI: 10.6084/m9.figshare.21865338
title: Supplementary Material for: Somatic variants and exon-level copy number changes in five hyperplastic-stage oral leukoplakias.

description: Oral leukoplakia (OL), an oral potentially malignant disorder begins with a hyperplastic/hyperkeratotic stage at which no genome-scale somatic single nucleotide variant profiles have been described so far. We performed exome sequencing of five cases at this stage with no evidence of dysplasia to identify genetic alterations (exon-level copy number alterations, indels, and single nucleotide variants), their association with transcript levels and relationship with oral cancer susceptibility. Pathway enrichment analysis of genes associated with tobacco chewing and age-related mutation signatures, transcripts with variants predicted to be functionally damaging and those with significantly altered levels have all indicated the involvement of focal adhesion, ECM–receptor interactions, regulation of cytoskeleton and DNA repair. Two novel mutations identified in FAT1 tumor suppressor gene were associated with decreased transcript levels. In addition, 16 expressed cancer driver genes contained functionally damaging variants. Many of the affected genes were also reported in dysplastic OL lesions. The presence of variants in cancer driver genes and those shared with oral dysplasias possibly provide a basis for further progression and increased susceptibility to oral cancer.
DOI: 10.6084/m9.figshare.21865338.v1
title: Supplementary Material for: Somatic variants and exon-level copy number changes in five hyperplastic-stage oral leukoplakias.

description: Oral leukoplakia (OL), an oral potentially malignant disorder begins with a hyperplastic/hyperkeratotic stage at which no genome-scale somatic single nucleotide variant profiles have been described so far. We performed exome sequencing of five cases at this stage with no evidence of dysplasia to identify genetic alterations (exon-level copy number alterations, indels, and single nucleotide variants), their association with transcript levels and relationship with oral cancer susceptibility. Pathway enrichment analysis of genes associated with tobacco chewing and age-related mutation signatures, transcripts with variants predicted to be functionally damaging and those with significantly altered levels have all indicated the involvement of focal adhesion, ECM–receptor interactions, regulation of cytoskeleton and DNA repair. Two novel mutations identified in FAT1 tumor suppressor gene were associated with decreased transcript levels. In addition, 16 expressed cancer driver genes contained functionally damaging variants. Many of the affected genes were also reported in dysplastic OL lesions. The presence of variants in cancer driver genes and those shared with oral dysplasias possibly provide a basis for further progression and increased susceptibility to oral cancer.
DOI: 10.5258/soton/wp00754
title: Uganda 100m building class, version 1.0

description: Gridded maps of residential/non-residential building classifications and associated building patterns for Uganda (UGA), version 1.0
DOI: 10.6084/m9.figshare.21865095
title: Product recommendation agents and customers’ search experience

description: All the constructs were measured using previous scales with well-established validity and reliability. A seven-point Likert scale was used for all the items. Besides the variables of interest to this study, the survey instrument measured control variables such as the respondents' demographic profile (age, gender, education, and employment), online behaviour such as duration of browsing and number of purchases made during a month. Particularly the duration of browsing and the number of purchases per month were measured to rule out social bias. People who browsed for less than 2 hours and made one or fewer purchases were intended to be dropped from the analysis. However, the data did not contain people with the above conditions. Hence, a total of 252 observations were considered for analysis. <br>
DOI: 10.6084/m9.figshare.21865215
title: data.xlsx

description: Role of Prosumer in Energy supply chain and compliance of Renewable Purchage obligation.
DOI: 10.6084/m9.figshare.21865215.v1
title: data.xlsx

description: Role of Prosumer in Energy supply chain and compliance of Renewable Purchage obligation.
DOI: 10.48428/adattar/b7xdhc
title: IO1: DaLiCo Glossary and Dimensions

description: DaLiCo Glossary (Data Literacy in Context Glossary) is a collection of relevant key concepts in the field of data literacy (education) developed in cooperation with the partners from the ERASMUS+ Project "Data Literacy in Context" (DaLiCo) (https://dalico.info/about/). Integrated part of the Glossary is DaLiCo Dimensions, a suggestion for basic dimensions for the description of generic data literacy competences in the field of higher education. The dimensions address 6 core competencies (Data identification, Data understanding, Data use, Data reflexivity, Data managing, Data communication) roughly oriented towards the data life cycle. DaLiCo Glossary is structured as a thesaurus following the DIN ISO 25964-1:2011.
DOI: 10.5281/zenodo.7314021
title: Replication Package for: "Stalled Racial Progress and Japanese Trade in the 1970s and 1980s"

description: Batistich, Mary Kate and Timothy N. Bond. forthcoming. "Stalled Racial Progress and Japanese Trade in the 1970s and 1980s." <em>Review of Economic Studies</em> These files contain the data and code to replicate the main results and online appendix for<br> "Stalled Racial Progress and Japanese Trade in the 1970s and 1980s" by Mary Kate Batistich and Timothy N. Bond.
DOI: 10.5281/zenodo.7314020
title: Replication Package for: "Stalled Racial Progress and Japanese Trade in the 1970s and 1980s"

description: Batistich, Mary Kate and Timothy N. Bond. forthcoming. "Stalled Racial Progress and Japanese Trade in the 1970s and 1980s." <em>Review of Economic Studies</em> These files contain the data and code to replicate the main results and online appendix for<br> "Stalled Racial Progress and Japanese Trade in the 1970s and 1980s" by Mary Kate Batistich and Timothy N. Bond.
DOI: 10.5281/zenodo.7484407
title: Replication Package for: "Stalled Racial Progress and Japanese Trade in the 1970s and 1980s"

description: Batistich, Mary Kate and Timothy N. Bond. forthcoming. "Stalled Racial Progress and Japanese Trade in the 1970s and 1980s." <em>Review of Economic Studies</em> These files contain the data and code to replicate the main results and online appendix for<br> "Stalled Racial Progress and Japanese Trade in the 1970s and 1980s" by Mary Kate Batistich and Timothy N. Bond.
DOI: 10.5066/p91mlpxj
title: Burmese python acceleration and location data, Everglades National Park, 2010 - 2012

description: The dataset contains 3 components: (1) acceleration data logger (ADL) data, (2) GPS location data, and (3) body temperature data. We have ADL data from pythons in captivity (N = 2) and in free-ranging snakes (N=4). We have GPS data for 3 out of 4 free-ranging snakes. We have body temperature data for all 4 free-ranging snakes.
DOI: 10.6084/m9.figshare.20424912
title: Supplementary Tables S1-S10

description: Supplementary tables S1 to S10 containing all metadata, accessions and expanded metabolic data for the paper '<em>Candidatus</em> Megaira' are diverse symbionts of algae and ciliates with the potential for defensive symbiosis <br> S1 Meta data tables for draft genomes examined in this study S2 Accessions for additional genomes used S3 AAI % similarity across Ca. Megaira used in figure 3a S4 ANIb % Similarity across Ca. Megaira used in figure 3b S5 KEGG ko hits S6 KEGG module completeness used in figure 5 and 6 S7 16S rRNA accessions used in phylogeny Figure 2 S8 Gene cluster presence absence matrix used in figure 4 and supplementary figure 1 S9 GTDBtk results for SRA and GenBank Environmental MAGs S10 top 10 blastp results for RiPP, NRPS and CDPS regions identified by antiSMASH
DOI: 10.6084/m9.figshare.20424912.v2
title: Supplementary Tables S1-S10

description: Supplementary tables S1 to S10 containing all metadata, accessions and expanded metabolic data for the paper '<em>Candidatus</em> Megaira' are diverse symbionts of algae and ciliates with the potential for defensive symbiosis <br> S1 Meta data tables for draft genomes examined in this study S2 Accessions for additional genomes used S3 AAI % similarity across Ca. Megaira used in figure 3a S4 ANIb % Similarity across Ca. Megaira used in figure 3b S5 KEGG ko hits S6 KEGG module completeness used in figure 5 and 6 S7 16S rRNA accessions used in phylogeny Figure 2 S8 Gene cluster presence absence matrix used in figure 4 and supplementary figure 1 S9 GTDBtk results for SRA and GenBank Environmental MAGs S10 top 10 blastp results for RiPP, NRPS and CDPS regions identified by antiSMASH
DOI: 10.6084/m9.figshare.20424912.v1
title: Supplementary Tables S1-S10

description: Supplementary tables S1 to S10 containing all metadata, accessions and expanded metabolic data