cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12923237
title: Additional file 11 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 11: Table S10. Expression profiles of GmGRAS genes in multiple tissues throughout various developmental stages.
DOI: 10.6084/m9.figshare.22360297.v1
title: Factor & trait correlation 2 from Majestic tigers: personality structure in the great Amur cat

description: Correlation between factors and traits in sample 1
DOI: 10.6084/m9.figshare.8207132
title: Additional file 6: of Comparative transcriptomic analysis reveals genetic divergence and domestication genes in Diospyros

description: Table S2. Ten top-hits for the nine Diospyros samples annotated using the NCBI NR database with BLASTX. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.24457724
title: Additional file 1 of Provenance differentiation and earth surface process of the Mu Us sandy land constrained by detrital zircon U–Pb dating

description: Additional file 1. Table S1. Detrital zircon U-Pb ages of sediments in the Mu Us sandy land from this work.
DOI: 10.6084/m9.figshare.8207132.v1
title: Additional file 6: of Comparative transcriptomic analysis reveals genetic divergence and domestication genes in Diospyros

description: Table S2. Ten top-hits for the nine Diospyros samples annotated using the NCBI NR database with BLASTX. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.15020387
title: Additional file 10 of Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19

description: Additional file 10: Table S9. Imputed gene associations from COVID-19 GWAS.
DOI: 10.6084/m9.figshare.15020408
title: Additional file 7 of Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19

description: Additional file 7: Table S6. Genes clustered by pseudo time analysis.
DOI: 10.6084/m9.figshare.15020405.v1
title: Additional file 6 of Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19

description: Additional file 6: Table S5. Differences in gene set activity scores among COVID-19 patients and controls.
DOI: 10.6084/m9.figshare.22360354
title: Data from Non-canonical role of the sympathetic nervous system in the day-night rhythm in heart rate

description: Although for many decades, the day-night rhythm in resting heart rate has been attributed to the parasympathetic branch of the autonomic nervous system (high vagal tone during sleep), recently we have shown that there is a circadian clock in the cardiac pacemaker, the sinus node, and the day-night rhythm in heart rate involves an intrinsic rhythmic transcriptional remodelling of pacemaker ion channels, particularly <i>Hcn4</i>. We have now investigated the role of the sympathetic branch of the autonomic nervous system in this and shown it to have a non-canonical role. In mice, sustained long-term block of cardiac β-adrenergic receptors by propranolol administered in the drinking water abolished the day-night rhythm in pacemaking in the isolated sinus node. Concomitant with this, there was a loss of the normal day-night rhythm in many pacemaker ion channel transcripts. However, there was little or no change in the local circadian clock, indicating that the well-known day-night rhythm in sympathetic nerve activity is directly involved in pacemaker ion channel transcription. The day-night rhythm in pacemaking helps explains the occurrence of clinically significant bradyarrhythmias during sleep and this study improves our understanding of this pathology.This article is part of the theme issue ‘The heartbeat: its molecular basis and physiological mechanisms’.
DOI: 10.6084/m9.figshare.12923240.v1
title: Additional file 12 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 12: Table S11. Pairwise correlation coefficients between different expressed GmGRAS genes in various tissues.
DOI: 10.6084/m9.figshare.12923264
title: Additional file 1 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 1: Table S1. The 117 identified GmGRAS genes in this study.
DOI: 10.6084/m9.figshare.22360354.v1
title: Data from Non-canonical role of the sympathetic nervous system in the day-night rhythm in heart rate

description: Although for many decades, the day-night rhythm in resting heart rate has been attributed to the parasympathetic branch of the autonomic nervous system (high vagal tone during sleep), recently we have shown that there is a circadian clock in the cardiac pacemaker, the sinus node, and the day-night rhythm in heart rate involves an intrinsic rhythmic transcriptional remodelling of pacemaker ion channels, particularly <i>Hcn4</i>. We have now investigated the role of the sympathetic branch of the autonomic nervous system in this and shown it to have a non-canonical role. In mice, sustained long-term block of cardiac β-adrenergic receptors by propranolol administered in the drinking water abolished the day-night rhythm in pacemaking in the isolated sinus node. Concomitant with this, there was a loss of the normal day-night rhythm in many pacemaker ion channel transcripts. However, there was little or no change in the local circadian clock, indicating that the well-known day-night rhythm in sympathetic nerve activity is directly involved in pacemaker ion channel transcription. The day-night rhythm in pacemaking helps explains the occurrence of clinically significant bradyarrhythmias during sleep and this study improves our understanding of this pathology.This article is part of the theme issue ‘The heartbeat: its molecular basis and physiological mechanisms’.
DOI: 10.6084/m9.figshare.12923267
title: Additional file 2 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 2: Table S2. Coding sequences and protein sequences of the identified soybean GRAS gene members.
DOI: 10.6084/m9.figshare.12923270
title: Additional file 3 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 3: Table S3. Corresponding names of 32 AtGRAS genes in Arabidopsis.
DOI: 10.6084/m9.figshare.12923279
title: Additional file 6 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 6: Table S5. Gene density of each chromosome or scaffold of the soybean genome.
DOI: 10.6084/m9.figshare.12923282.v1
title: Additional file 7 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 7: Table S6. Tandemly and segmentally duplicated GmGRAS gene pairs.
DOI: 10.6084/m9.figshare.22360303
title: Procrustes with raters removed 1 from Majestic tigers: personality structure in the great Amur cat

description: Three-factor solution Procustes rotation with Raters removed sample 1
DOI: 10.6084/m9.figshare.7680485
title: The impact of ischemic stroke on connectivity gradients

description: Correlation between slope/intercept and clinical scores.
DOI: 10.6084/m9.figshare.22360303.v1
title: Procrustes with raters removed 1 from Majestic tigers: personality structure in the great Amur cat

description: Three-factor solution Procustes rotation with Raters removed sample 1
DOI: 10.6084/m9.figshare.15020390
title: Additional file 1 of Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19

description: Additional file 1: Table S1. Clinical characteristics of donors.
DOI: 10.6084/m9.figshare.12399011.v1
title: Additional file 3 of Co-occurrence pattern and function prediction of bacterial community in Karst cave

description: Additional file 3: Table S2. List of the encoding genes and enzymes involved in carbon metabolism.
DOI: 10.6084/m9.figshare.15020390.v1
title: Additional file 1 of Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19

description: Additional file 1: Table S1. Clinical characteristics of donors.
DOI: 10.6084/m9.figshare.23254361
title: Marine sediment data by Greenland marine-terminating glaciers

description: Source data file with basic with basic Information for all cores, including core positions, mass accumulation rates, and glaciological data for glaciers contributing meltwater to the fjords from where the cores were taken.
DOI: 10.6084/m9.figshare.8207141
title: Additional file 7: of Comparative transcriptomic analysis reveals genetic divergence and domestication genes in Diospyros

description: Table S3. COG classification for the nine Diospyros samples. (XLSX 99 kb)
DOI: 10.6084/m9.figshare.8207141.v1
title: Additional file 7: of Comparative transcriptomic analysis reveals genetic divergence and domestication genes in Diospyros

description: Table S3. COG classification for the nine Diospyros samples. (XLSX 99 kb)
DOI: 10.6084/m9.figshare.15020399
title: Additional file 4 of Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19

description: Additional file 4: Table S3. Differentially expressed genes.
DOI: 10.6084/m9.figshare.15020414.v1
title: Additional file 9 of Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19

description: Additional file 9: Table S8. Differences in TF regulon activity scores comparing COVID-19 patients and controls.
DOI: 10.6084/m9.figshare.12923246.v1
title: Additional file 14 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 14: Table S13. Pairwise correlation coefficients between different expressed GmGRAS genes during saline stress.
DOI: 10.6084/m9.figshare.12923247.v1
title: Additional file 7 of Genome-wide analysis of lncRNA and mRNA expression and endogenous hormone regulation during tension wood formation in Catalpa bungei

description: Additional file 7: Table S9 Primer information.
DOI: 10.6084/m9.figshare.12923261
title: Additional file 19 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 19: Table S17. Sequences of the primers used in this study.
DOI: 10.6084/m9.figshare.12923261.v1
title: Additional file 19 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 19: Table S17. Sequences of the primers used in this study.
DOI: 10.6084/m9.figshare.15020396
title: Additional file 3 of Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19

description: Additional file 3: Table S2. Sequencing statistics for SARS-CoV-2 targeted RNA-seq.
DOI: 10.6084/m9.figshare.15020402
title: Additional file 5 of Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19

description: Additional file 5: Table S4. Gene Ontology term enrichment in differentially expressed genes of PFC microglia.
DOI: 10.6084/m9.figshare.15020411
title: Additional file 8 of Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19

description: Additional file 8: Table S7. Transcription regulatory modules estimated by SCENIC.
DOI: 10.6084/m9.figshare.12923226
title: Additional file 1 of Genome-wide analysis of lncRNA and mRNA expression and endogenous hormone regulation during tension wood formation in Catalpa bungei

description: Additional file 1: Table S1. The wood properties of different clones of C. bungei.
DOI: 10.6084/m9.figshare.12923267.v1
title: Additional file 2 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 2: Table S2. Coding sequences and protein sequences of the identified soybean GRAS gene members.
DOI: 10.6084/m9.figshare.12923237.v1
title: Additional file 11 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 11: Table S10. Expression profiles of GmGRAS genes in multiple tissues throughout various developmental stages.
DOI: 10.6084/m9.figshare.12923270.v1
title: Additional file 3 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 3: Table S3. Corresponding names of 32 AtGRAS genes in Arabidopsis.
DOI: 10.6084/m9.figshare.15020396.v1
title: Additional file 3 of Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19

description: Additional file 3: Table S2. Sequencing statistics for SARS-CoV-2 targeted RNA-seq.
DOI: 10.6084/m9.figshare.21310705
title: Additional file 1 of Construction of a transposase accessible chromatin landscape reveals chromatin state of repeat elements and potential causal variant for complex traits in pigs

description: Additional file 1: Table S1. Summary information on the ATAC-seq samples investigated in this study. Table S2. Summary information on the RNA-seq samples investigated in this study. Table S3. The information of download data. Table S4. Comparison with peaks of previous study designed by zhou et al. Table S5. Motif enrichment analysis of shared peaks. Table S6. The information of PERV overlapped peaks. Table S7. The information of GWAS SNPs which located in peak regions. Table S8. The information of virus data. Table S9. The information of virus data with sequence homology to shared open TEs. Table S10. GO and KEGG enrichment analysis of conserved accessible TEs homologous to viral sequences.
DOI: 10.6084/m9.figshare.15020405
title: Additional file 6 of Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19

description: Additional file 6: Table S5. Differences in gene set activity scores among COVID-19 patients and controls.
DOI: 10.6084/m9.figshare.15020414
title: Additional file 9 of Single-nucleus transcriptome analysis of human brain immune response in patients with severe COVID-19

description: Additional file 9: Table S8. Differences in TF regulon activity scores comparing COVID-19 patients and controls.
DOI: 10.6084/m9.figshare.21310705.v1
title: Additional file 1 of Construction of a transposase accessible chromatin landscape reveals chromatin state of repeat elements and potential causal variant for complex traits in pigs

description: Additional file 1: Table S1. Summary information on the ATAC-seq samples investigated in this study. Table S2. Summary information on the RNA-seq samples investigated in this study. Table S3. The information of download data. Table S4. Comparison with peaks of previous study designed by zhou et al. Table S5. Motif enrichment analysis of shared peaks. Table S6. The information of PERV overlapped peaks. Table S7. The information of GWAS SNPs which located in peak regions. Table S8. The information of virus data. Table S9. The information of virus data with sequence homology to shared open TEs. Table S10. GO and KEGG enrichment analysis of conserved accessible TEs homologous to viral sequences.
DOI: 10.6084/m9.figshare.12923273
title: Additional file 4 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 4: Table S4. Analyses the motifs in soybean GRAS proteins from the MEME website.
DOI: 10.6084/m9.figshare.8207159
title: Additional file 9: of Comparative transcriptomic analysis reveals genetic divergence and domestication genes in Diospyros

description: Table S5. Primer sequences and Nr-annotation for 31 PSGs. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.8207159.v1
title: Additional file 9: of Comparative transcriptomic analysis reveals genetic divergence and domestication genes in Diospyros

description: Table S5. Primer sequences and Nr-annotation for 31 PSGs. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.23935808
title: Additional file 1 of Diminished activation of excitatory neurons in the prelimbic cortex leads to impaired working memory capacity in mice

description: Additional file 1. Individual values for figures. Each sheet in the Excel file is named by the figure.
DOI: 10.6084/m9.figshare.23935808.v1
title: Additional file 1 of Diminished activation of excitatory neurons in the prelimbic cortex leads to impaired working memory capacity in mice

description: Additional file 1. Individual values for figures. Each sheet in the Excel file is named by the figure.
DOI: 10.6084/m9.figshare.14498679
title: Surface wave height regulated by ocean currents: An observational perspective

description: in-situ observations of significant wave height
DOI: 10.6084/m9.figshare.12923241.v1
title: Additional file 5 of Genome-wide analysis of lncRNA and mRNA expression and endogenous hormone regulation during tension wood formation in Catalpa bungei

description: Additional file 5: Table S4 The annotation of genes regulated by potential lncRNAs through cis regulation. Table S5 The annotation of genes regulated by potential lncRNAs via trans regulation. Table S6 The annotation of genes regulated by potential lncRNAs via antisense regulation.
DOI: 10.6084/m9.figshare.12923285
title: Additional file 8 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 8: Table S7. One-to-one orthologous relationships between the GRAS gene members in soybean and the other six species.
DOI: 10.6084/m9.figshare.12923285.v1
title: Additional file 8 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 8: Table S7. One-to-one orthologous relationships between the GRAS gene members in soybean and the other six species.
DOI: 10.6084/m9.figshare.12399011
title: Additional file 3 of Co-occurrence pattern and function prediction of bacterial community in Karst cave

description: Additional file 3: Table S2. List of the encoding genes and enzymes involved in carbon metabolism.
DOI: 10.6084/m9.figshare.12923249
title: Additional file 15 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 15: Table S14. Pairwise correlation coefficients between different expressed GmGRAS genes during dehydration stress.
DOI: 10.6084/m9.figshare.12923252
title: Additional file 16 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 16: Table S15. Expression profiles of GmGRAS genes in soybean embryonic axes during seed germination.
DOI: 10.6084/m9.figshare.12923258.v1
title: Additional file 18 of Genome-wide identification and characterization of GRAS genes in soybean (Glycine max)

description: Additional file 18: Table S16. Pairwise correlation coefficients between different expressed GmGRAS genes in soybean embryonic axes during seed germination.
DOI: 10.6084/m9.figshare.12399020.v1
title: Additional file 4 of Co-occurrence pattern and function prediction of bacterial community in Karst cave

description: Additional file 4: Table S3. List of the encoding genes and enzymes involved in nitrogen metabolism.
DOI: 10.6084/m9.figshare.15020474
title: Additional file 1 of RNA-seq co-expression network analysis reveals anxiolytic behavior of mice with Efnb2 knockout in parvalbumin+ neurons

description: Additional file 1. Summary of assembly statistics after Illumina sequencing.
DOI: 10.6084/m9.figshare.15020492.v1
title: Additional file 7 of RNA-seq co-expression network analysis reveals anxiolytic behavior of mice with Efnb2 knockout in parvalbumin+ neurons

description: Additional file 7. KEGG enrichment analysis for genes in MEgreen module.
DOI: 10.6084/m9.figshare.15020486
title: Additional file 5 of RNA-seq co-expression network analysis reveals anxiolytic behavior of mice with Efnb2 knockout in parvalbumin+ neurons

description: Additional file 5. List of genes within each WGCNA module.
DOI: 10.6084/m9.figshare.15020477.v1
title: Additional file 2 of RNA-seq co-expression network analysis reveals anxiolytic behavior of mice with Efnb2 knockout in parvalbumin+ neurons

description: Additional file 2. DEGs in KO vs. WT, KO_EPM vs. WT_EPM, KO_EPM vs. KO and WT_EPM, vs. WT.
DOI: 10.15468/dl.dkkqyd
title: Occurrence Download

description: A dataset containing 259 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Bats of Northern Peninsular Malaysia"
 ]
}

 The dataset includes 259 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0299126-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b48ypr
title: Occurrence Download

description: A dataset containing 128082 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Asplenium ruta-muraria L."
 ]
}

 The dataset includes 128082 records from 537 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059695-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ewnva6
title: Occurrence Download

description: A dataset containing 44495 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "TaxonKey is Rhododendron L."
 ]
}

 The dataset includes 44495 records from 142 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0271698-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5f7qbx
title: Occurrence Download

description: A dataset containing 5440 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Reptilia)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-98.540391141083 15.664537027606,-95.9672411699799 15.664537027606,-95.9672411699799 16.7210257861845,-98.540391141083 16.7210257861845,-98.540391141083 15.664537027606))"
 ]
}

 The dataset includes 5440 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037827-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.egvg8t
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Panthera onca (Linnaeus, 1758)",
 "Country is Mexico",
 "Geometry POLYGON((-104.018554 22.411028,-103.996582 22.532853,-103.403320 22.695120,-102.568359 22.228090,-102.678222 21.800308,-103.271484 21.289374,-101.953125 22.065278,-101.162109 21.698265,-101.513671 21.022982,-102.106933 20.324023,-102.963867 20.055931,-102.568359 19.746024,-102.634277 18.979025,-103.952636 19.124409,-104.414062 19.290405,-104.853515 19.207428,-105.776367 20.117839,-105.534667 20.591652,-105.183105 21.330315,-104.414062 20.858811,-103.974609 21.555284,-104.458007 21.983801,-104.018554 22.411028))"
 ]
}

 The dataset includes 14 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009811-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vvi2vc
title: Occurrence Download

description: A dataset containing 1229 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Harpia harpyja (Linnaeus, 1758)"
 ]
}

 The dataset includes 1229 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007114-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.