cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15703940
title: The Human Niche Space of Post-LGM Late Upper Paleolithic Europe - Supplemental Material

description: The data provided here are the supplemental information accompanying the journal article The Human Niche Space of Post-LGM Late Upper Paleolithic Europe: The Effects of Climate and Population Growth on Human Land Use by Yaworsky, Hussain, & Riede. All analyses were performed in R v4.5.0 and are documented in the HTML document, Supplemental 4.

Version 1.2 of the Analysis Markdown Document incoporates changes made to functions within the package ENMeval.

List of Supplemental Files:



Spatiotemporal Archaeological Observations - File name: Archaeologicaldata_v1.csv



Archaeological observations derived from Kretschmer (2015) and supplemented with additional observations (see main paper for details).



Summed Probability Estimate for Population Estimation - File name: Population_SPD2.csv



Summed probability distribution estimating changes in relative population size across Europe from 22ka ago to 9.1ka ago using data from the P3K14C database (Bird et al, 2022; see Supplemental 4 for details).



Spatiotemporal Background Points - File name: AbsencePointData.csv



Randomly generated background points. 100 random points were generated in each millennium.



Analysis Markdown Document - File Name: CLIOARCH_MD_v1.2.html



Markdown illustrating step-by-step the methods used to organize and analyze the data.



High-Resolution Spatiotemporal Predictions - File name: SDM_MainGIF.mp4



High-resolution mp4 file showing the predictions of the potential climate niche space for humans from 22ka to 9.1ka ago.



Potential Niche Space 22ka to 9.1ka ago- File name: Human_Niche_Size.csv



Quantification of the potential climate niche space for each century.




The Climate data are not provided due to their size but are sourced from Karger et al (2023) and are accessible here (https://chelsa-climate.org/).
DOI: 10.15468/dl.e4e7gg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gyrosigma attenuatum (Kützing) Rabenhorst, 1853",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.6306 -23.844,35.6007 -23.8125,35.6007 -24.0157,35.6306 -23.844))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059531-250525065834625/datasets/export for details.
DOI: 10.15468/dl.7v2s88
title: Occurrence Download

description: A dataset containing 9813 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monochamus sutor (Linnaeus, 1758)"
 ]
}

 The dataset includes 9813 records from 224 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059529-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15703971
title: Enhancing Student Engagement and Learning in Database Programming Through Active Learning Strategies

description: Supplementary material that includes the documentation and sources needed to replicate the analysis performed with R regarding student's marks.
DOI: 10.15468/dl.a7gq9c
title: Occurrence Download

description: A dataset containing 37828 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Mosquito Alert Dataset"
 ]
}

 The dataset includes 37828 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059530-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fsrk2t
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haplochromis xenognathus Greenwood, 1957",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((29.1409 31.3397,28.1382 31.6271,28.1382 29.0599,35.2765 29.0599,35.4107 29.4968,34.5044 31.7516,34.206 31.8338,33.641 31.6189,33.1338 31.7313,32.728 31.6056,32.0818 31.9994,31.0088 32.1001,30.2163 31.954,29.1409 31.3397))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059532-250525065834625/datasets/export for details.
DOI: 10.25934/pr00001541.0
title: Data Package for study.

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.15468/dl.7jzgm7
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gyrosigma rautenbachiae Cholnoky, 1957",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((30.0251 -31.3959,30.5701 -30.7329,30.5701 -28.5786,25.5395 -28.5786,25.5395 -32.9007,28.2048 -32.9007,28.5753 -32.6569,29.4902 -31.7517,30.0251 -31.3959))"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059533-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h8pq9c
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haplochromis xenognathus Greenwood, 1957",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((37.1382 20.0599,28.1382 20.0599,28.1382 11.0599,37.1382 11.0599,37.1382 20.0599))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059534-250525065834625/datasets/export for details.
DOI: 10.15468/dl.4fgh9a
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gyrosigma rautenbachiae Cholnoky, 1957",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((30.5701 -24.0715,25.5395 -24.0715,25.5395 -28.5786,30.5701 -28.5786,30.5701 -24.0715))"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059535-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25934/pr00001923.0
title: Data Package for study.

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.15468/dl.8tdybd
title: Occurrence Download

description: A dataset containing 585 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euagrus Ausserer, 1875"
 ]
}

 The dataset includes 585 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059537-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8xy9ga
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haplochromis xenognathus Greenwood, 1957",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((34.8752 27.7528,35.2765 29.0599,28.1382 29.0599,28.1382 20.0599,37.1382 20.0599,37.1382 22.4869,36.4196 23.1029,36.7113 23.3743,36.7246 23.7183,35.8613 24.5048,35.1435 25.653,35.0599 25.8405,35.3478 26.1707,35.2694 26.5949,34.978 26.7967,34.4974 26.7726,34.5022 27.2926,34.8752 27.7528))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059536-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.29369882
title: Clinopyroxene major and trace element data obtained via EPMA and LA-ICP-MS for the Kula Volcanic Field, Western Turkey

description: This data includes major and trace element chemistry from volcanic products, such as lava flows and cinder cones, from a Monogenetic Volcanic Field in Western Turkey. Presented is data from the mineral phase clinopyroxene, showing major elements in weight percent (wt%) and trace elements in parts per million (ppm). The sample column shows sample name, crystals analysed, and position of the crystal, for example the core, mantle, or rim.
DOI: 10.6084/m9.figshare.29369882.v1
title: Clinopyroxene major and trace element data obtained via EPMA and LA-ICP-MS for the Kula Volcanic Field, Western Turkey

description: This data includes major and trace element chemistry from volcanic products, such as lava flows and cinder cones, from a Monogenetic Volcanic Field in Western Turkey. Presented is data from the mineral phase clinopyroxene, showing major elements in weight percent (wt%) and trace elements in parts per million (ppm). The sample column shows sample name, crystals analysed, and position of the crystal, for example the core, mantle, or rim.
DOI: 10.15468/dl.h9jg6y
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((3.39251 39.62132,3.54197 39.62253,3.54355 39.69157,3.49163 39.76659,3.38622 39.81978,3.16596 39.75449,3.39251 39.62132))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Zamenis scalaris (Schinz, 1822)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059539-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12120624
title: Mental Health Conversational AI Training Dataset
DOI: 10.15468/dl.surcxm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gyrosigma rautenbachiae Cholnoky, 1957",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((27.1332 -20.158,25.5395 -23.2724,25.5395 -24.0715,30.5701 -24.0715,30.5701 -20.3186,29.6496 -19.6123,28.947 -19.4003,28.1821 -19.4609,27.6072 -19.7214,27.1332 -20.158))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059538-250525065834625/datasets/export for details.
DOI: 10.34740/kaggle/dsv/12226364
title: World Weather Repository ( Daily Updating )
DOI: 10.15468/dl.rqqhjp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haplochromis xenognathus Greenwood, 1957",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((18.2494 -34.8049,19.1382 -35.0665,19.1382 -33.9401,17.8437 -33.9401,17.8729 -34.3757,18.2494 -34.8049))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059540-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.13143209
title: Supplementary inforamtion - Development and Application of a Cell-Based Reporter Gene Assay for Detecting (Me-)PAHs in Water Samples
DOI: 10.5281/zenodo.13143210
title: Supplementary inforamtion - Development and Application of a Cell-Based Reporter Gene Assay for Detecting (Me-)PAHs in Water Samples
DOI: 10.15468/dl.7w9t73
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gyrosigma rautenbachiae Cholnoky, 1957",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.0214 -34.0501,25.5395 -34.1098,25.5395 -32.9007,20.509 -32.9007,20.509 -34.5676,20.524 -34.555,20.8859 -34.5419,20.9606 -34.4398,21.2995 -34.5131,21.5296 -34.4338,21.8696 -34.4439,22.0323 -34.2835,22.221 -34.2428,22.2566 -34.1304,22.5993 -34.0741,22.9652 -34.1674,23.4069 -34.1858,23.4955 -34.0792,23.6056 -34.0563,24.8471 -34.2877,24.9447 -34.2397,25.0214 -34.0501))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059541-250525065834625/datasets/export for details.
DOI: 10.15468/dl.56dyee
title: Occurrence Download

description: A dataset containing 5156265 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-2.07113 41.09753,-1.9758 41.10573,-1.84576 41.05046,-1.69342 40.93173,-1.68315 40.85054,-1.61312 40.79567,-1.61629 40.64257,-1.69906 40.64353,-1.74686 40.61703,-1.76051 40.51808,-1.86824 40.4291,-1.85767 40.35693,-1.78768 40.32018,-1.7888 40.25713,-1.75403 40.22973,-1.68352 40.22895,-1.55617 40.13734,-1.50903 40.14575,-1.50962 40.11873,-1.46331 40.0911,-1.29914 40.08881,-1.19434 40.06019,-1.23043 40.02471,-1.23159 39.97969,-1.19765 39.93412,-1.16304 39.91556,-0.97568 39.92144,-0.97779 39.84941,-0.92074 39.80336,-0.85098 39.79307,-0.75615 39.83632,-0.73071 39.89889,-0.77601 39.94481,-0.69232 39.99723,-0.57432 40.02184,-0.49814 40.18237,-0.3321 40.2237,-0.28154 40.3126,-0.22165 40.33819,-0.21869 40.41018,-0.2415 40.42874,-0.20506 40.45489,-0.20319 40.49988,-0.23559 40.57272,-0.23262 40.64471,-0.1728 40.66127,-0.17051 40.71526,0.06725 40.64062,0.10152 40.66851,0.20749 40.68013,0.34469 40.80046,0.31701 40.8989,0.3623 40.95399,0.36086 40.98998,0.34682 41.0437,0.28555 41.08731,0.44717 41.2171,0.4563 41.28935,0.43138 41.31582,0.4412 41.37008,0.4166 41.38754,0.41445 41.44153,0.46159 41.4606,0.51865 41.53389,0.49087 41.63236,0.41819 41.64876,0.40511 41.67548,0.45169 41.71255,0.49973 41.71361,0.53369 41.76838,0.59346 41.77865,0.67502 41.85238,0.67175 41.94238,0.73042 41.98858,0.78511 42.15175,0.77175 42.18752,0.83945 42.3329,0.78587 42.47597,0.82078 42.52166,0.82889 42.63889,0.67862 42.744,0.32542 42.71828,0.32349 42.76326,0.23723 42.77922,0.06673 42.76597,0.0558 42.73868,0 42.71922,0 42.6922,-0.04573 42.69339,-0.15176 42.77712,-0.15052 42.80411,-0.19979 42.79632,-0.2711 42.84306,-0.35667 42.84507,-0.38264 42.80965,-0.43189 42.80176,-0.51633 42.83064,-0.52999 42.79492,-0.55442 42.79544,-0.66099 42.88772,-0.72217 42.88895,-0.71985 42.95194,-0.74369 42.97042,-0.86716 42.94577,-0.91858 42.87468,-0.9207 42.81169,-0.99607 42.75,-1.05714 42.75105,-1.10763 42.69786,-1.18084 42.69905,-1.24338 42.64599,-1.24414 42.61899,-1.30557 42.6019,-1.35573 42.5486,-1.35738 42.48559,-1.40695 42.45027,-1.42159 42.35141,-1.45866 42.32489,-1.4602 42.26187,-1.48487 42.24419,-1.46413 42.09982,-1.40503 42.04497,-1.44303 41.97344,-1.55182 41.96586,-1.61117 42.01163,-1.69568 42.01262,-1.71929 42.0399,-1.81559 42.05895,-1.87601 42.05956,-1.91272 42.03289,-1.92722 41.88892,-1.89184 41.84355,-1.91729 41.76274,-1.86966 41.73526,-1.87013 41.70824,-1.95513 41.655,-2.05146 41.63782,-2.06451 41.56587,-2.04079 41.54766,-2.04172 41.48462,-2.13742 41.49439,-2.23484 41.35996,-2.21331 41.16165,-2.07113 41.09753),(-0.73855 40.01615,-0.7387 40.01167,-0.73853 40.01678,-0.73855 40.01615))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 5156265 records from 1074 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059519-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.8ddti5zx
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (69 records)
DOI: 10.15468/dl.rp7zh9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haplochromis xenognathus Greenwood, 1957",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((17.8386 -33.865,17.8437 -33.9401,19.1382 -33.9401,19.1382 -24.9401,14.1824 -24.9401,14.3369 -25.1139,14.4676 -26.4801,15.0951 -27.969,16.3584 -29.3533,16.8305 -30.5692,17.7504 -31.9517,17.8134 -32.2275,17.4732 -32.4288,17.3432 -32.826,17.8386 -33.865))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059542-250525065834625/datasets/export for details.
DOI: 10.15468/dl.g6mfm5
title: Occurrence Download

description: A dataset containing 585 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euagrus Ausserer, 1875"
 ]
}

 The dataset includes 585 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059543-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15703910
title: DENTRO DATASET 2025

description: DENTRO: an improved dataset for an improved web tool

Introduction

In recent years, a growing interest in agroforestry systems has been observed in Belgium and the Netherlands. Therefore, it is important to pay sufficient attention to the tree species selection process as this plays a major role in whether the agroforestry project is successful or not. Climate change causes longer periods of (long-term) drought or heavy rainfall which can affect tree growth. This is why it is important that tree species fit the farmer’s field conditions and can handle well with (extreme) weather conditions occurring in the local region. This is why we developed DENTRO, a tree species selection tool of Agroforestry Flanders, in the first place. 

New version of DENTRO

In the previous version of DENTRO, the dataset was called ‘’DENTRO Tree Matrix’’ (EN) or ‘’DENTRO Bomenmatrix’’ (NL). This dataset contained information about how ~80 tree species match certain relevant parameters varying from abiotic conditions (e.g. soil, weather, light, etc.), animals, objectives (e.g. wood/fruit/nut production and ecological function), and feasibility (e.g. disease risks and planting material availability). You can find it here: https://doi.org/10.5281/zenodo.10889583. 

Now, we improved DENTRO by, among other things, adding more tree species and parameters including “climate scores” and translating the tool into English. As the KU Leuven published a study on climate trees including a useful dataset containing 254 tree species (Desie et al., 2024), this dataset was merged with the Tree Matrix dataset. At the moment, DENTRO contains 334 species and cultivars combined. 

Objective

The objective of DENTRO is to guide users in selecting tree and shrub species matching the users’  site conditions and goals. While using DENTRO, the user gains knowledge about tree characteristics, and the effect of a species suitability to certain site and climatic conditions. At the end, the user can generate a summarizing report that compiles the selected species along with the relevant parameters. The latter is useful for comparing different scenarios.

Dataset

This dataset is imported in the back-end of DENTRO (Python). The use of DENTRO is free, and can be accessed through the following link: Agroforestry DENTRO. DENTRO is part of the Agroforestry Planner of Agroforestry Flanders (https://www.agroforestryvlaanderen.be/en/agroforestry-planner-2 ) and is linked to DigitAF's Tool Catalogue (Tools, Data and Projects Catalogue - DigitAF)

Projects and partners



DigitAF (DigitAF)

CAMBIUM (Cambium: boslandbouw integraal - Agroforestry)

Agroforestry Vlaanderen (Home - Agroforestry)


 

More info? Contact us through info@agroforestryvlaanderen.be