cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29014094.v1
title: Psychological, Behavioral, and Socioeconomic Correlates of Stress in Bangladeshi Medical Students: A Cross-Sectional Study

description: Background: Academic stress is a widespread challenge among medical students, shaped by a complex interplay of sociodemographic, psychological, and behavioral factors. Although widely studied, limited research has explored how these factors influence academic stress among medical students in Southeast Asia. This study aims to explore how personal, psychological, and behavioral factors influence academic stress.Methods: A cross-sectional survey was conducted from October to December 2022 among 1,072 medical students from eight public colleges in Bangladesh, employing stratified random sampling. The Academic Stress Scale (ASS-40) was utilized to assess academic stress, while the Patient Health Questionnaire (PHQ-9), Generalized Anxiety Disorder (GAD-7), Insomnia Severity Index (ISI), Internet Addiction Test (IAT), Stress Coping Style Inventory (SCSI), and Rosenberg Self-Esteem Scale (RSES) were employed to evaluate depression, anxiety, insomnia, internet addiction, coping strategies, and self-esteem, respectively. Chi-square tests, t-tests, and logistic regression were used to interpret associations.Results: The predictive model incorporated sociodemographic, psychological, and behavioral factors, demonstrating high accuracy in identifying students at risk for academic stress. The analysis also uncovered several key determinants contributing to academic stress. Notably, Hindu students reported significantly higher stress levels than their Muslim peers. The father’s education, urban residence, and living with family were associated with increased stress, whereas higher maternal education appeared to offer a protective effect. Among psychological factors, depression exhibited the strongest association with academic stress, followed closely by anxiety and insomnia. Behavioral influences also played a significant role, with internet addiction correlating strongly to elevated stress levels. Additionally, coping strategies significantly influenced stress outcomes, with passive emotional coping providing a modest protective effect.Conclusion: Academic stress among medical students is multifaceted and driven by sociocultural, psychological, and behavioral factors. To alleviate stress, targeted interventions such as mental health support programs, parental awareness initiatives, and training on coping strategies should be implemented.
DOI: 10.6084/m9.figshare.7489568.v1
title: All raw data from Private parts for private property: evolution of penis size with more valuable, easily stolen shells

description: All raw data
DOI: 10.17632/4vgy5nv5gg
title: ACUPATHWAY.R.1

description: An important turning point in chronic pain management was the U.S. Opioid Epidemic. The US Centers for Disease Control and Prevention (CDC) stated in its first recommendation that non-pharmacologic therapy and non-opioid pharmacologic therapy are preferred for chronic pain. Acupuncture is widely used as an alternative treatment for chronic pain. Clinical Pathway are structured, multi-disciplinary plans of care designed to support the implementation of clinical guidelines and protocols. The purpose of this article is to assess the effectiveness of integrated clinical pathway approach for chronic pain treatment with acupuncture in a Pain Clinic.
DOI: 10.17632/f2khpckd8k
title: Neural population dynamics reveals disruption of spinal circuits’ responses to proprioceptive inputs during electrical stimulation of sensory afferents

description: Code used for presenting and processing the data in the paper “Neural population dynamics reveals disruption of spinal circuits’ responses to proprioceptive inputs during electrical stimulation of sensory afferents”
DOI: 10.6084/m9.figshare.11927112.v2
title: Improving effect estimates by limiting the variability in inverse propensity score weights

description: This study describes a novel method to reweight a comparison group used for causal inference, so the group is similar to a treatment group on observable characteristics yet avoids highly variable weights that would limit statistical power. The proposed method generalizes the covariate-balancing propensity score (CBPS) methodology developed by Imai and Ratkovic (2014) to enable researchers to effectively prespecify the variance (or higher-order moments) of the matching weight distribution. This lets researchers choose among alternative sets of matching weights, some of which produce better balance and others of which yield higher statistical power. We demonstrate using simulations that our Penalized CBPS approach can improve effect estimates over those from other established propensity score estimation approaches, producing lower mean squared error. We discuss applications where the method or extensions of it are especially likely to improve effect estimates and we provide an empirical example from the evaluation of Comprehensive Primary Care Plus, a U.S. health care model that aims to strengthen primary care across roughly 3,000 practices. Programming code is available to implement the method in Stata.
DOI: 10.6084/m9.figshare.22308550.v1
title: Dataset for Machine Learning Model in PhotoInMeter

description: We created a device called PhotoInMeter that is equipped with a color and intensity sensor and an ND Filter to reduce light intensity. <br> We collect data from multiple blue light sources with various intensity. We used Omeha Billiblanket Meter II as ground truth. <br> This data is then trained in our machine-learning model to create a cheaper device than Omeha Billiblanket Meter II
DOI: 10.6084/m9.figshare.4830016.v1
title: survey_data_messy_quality_control

description: Spreadsheet for Sorting Exersize in Data Carpentry Ecology Lesson
DOI: 10.17632/hms4c9k87d
title: Dataset of a study investigating the influence of COVID-19 pandemic on lung cancer surgery in Poland.

description: The COVID-19 pandemic has led to a reduction in the availability of healthcare services for patients. The aim of the present study was to analyze the impact of the COVID-19 pandemic on the surgical treatment of lung cancer in Poland. Data were obtained from the Polish National Lung Cancer Registry. We compared the period from before the pandemic (year 2019) to the period of the pandemic (year 2020) in terms of the number of operations carried out, percentage of patients who underwent invasive mediastinal staging, surgical approach, type of surgery, percentage of bronchial sleeve resections, histology, pathological stage, total length of hospital stay, duration of postoperative stay, and outcome at discharge. We found that during COVID-19 pandemic the number of anatomical lung resections in lung cancer decreased by over 20%, which was related to the daily number of new COVID-19 cases in Poland. We also found that in 2020, compared to 2019, the percentage of patients with advanced pathological stage was higher, duration of total hospital stay and postoperative hospital stay were shorter, and the rate of use of minimally invasive approach for pulmonary resection was higher. There were no changes in preoperative invasive mediastinal staging, types of resection and postoperative mortality. We concluded, that COVID-19 pandemic had a significant negative impact on radical surgical treatment of patients with resectable lung cancer.
DOI: 10.17632/vrfky24b8m
title: coronaChargingFoam: An OpenFOAM based solver for multi-physical simulations of direct unipolar diffusion charging of aerosol particles

description: Diffusion charging of ultrafine aerosol particles is widely used in various fields and understanding the multi-physical phenomena during the charging processes is critical to the optimization of chargers and prediction of particle evolution in particulate systems. In this work, a numerical algorithm of unipolar aerosol diffusion charging is coupled with corona discharge, a combination of electric field, current continuity and heat transfer, and fluid flow enabling the modelling of multi-physics in direct charging processes. The governing equations are discretized based on the finite volume schemes. Methods of numerically calculating the ion-particle attachment coefficients are proposed and a class named niMixedFvPatchField describing the boundary condition of ion injection on the anode is defined on the basis of OpenFOAM libraries. Iteratively strategies are applied to uncouple the governing equations and the PISO (Pressure Implicit with Splitting of Operators) algorithm is used to solve the aerosol flow equations. A new solver labelled as coronaChargingFoam in the OpenFOAM framework is developed to implement the numerical algorithm and it is further validated by comparing four test cases: Laplacian electric field, electric field-charge coupling effect, ion-particle attachment coefficients, and charging efficiencies. Acceptable agreement level in all these comparisons verifies the fidelity of the solver implementation.
DOI: 10.6084/m9.figshare.12656165.v35
title: COVID-19 Case Reports in China

description: Chinese prefectural level governments started to report daily confirmed COVID-19 cases online, starting from January 2020. The disclosures may contain the mobility, potential exposure scenario, epidemiological characteristics, and other useful information of individual cases. We organized a group of content coders since early March 2020, kept monitoring the information updates, manually extracted useful information from the public disclosures, and compiled these datasets.We welcome any form of collaborations with us and non-commercial reuse of our dataset. We highly encourage interested parties to examine the data, report errors in our coding, and help us to keep the data updated.The detailed data description can be found on SSRN preprint server https://dx.doi.org/10.2139/ssrn.3705815.
DOI: 10.6084/m9.figshare.27126231.v4
title: <b>The data set for </b><b>The iron chelator pulcherriminic acid functions as a </b><b>light sensor</b><b> in </b><b><i>Bacillus subtilis </i></b><b>biofilms</b>

description: <i>B. subtilis</i> biofilms have a distinctive light response mechanism that is mediated by the iron chelator pulcherriminic acid.
DOI: 10.17632/dvf6yvrg4x
title: Persistent complement dysregulation with signs of thromboinflammation in active Long Covid

description: Data associated with publication: C. Cervia-Hasler et al., Science 383, eadg7942 (2024). DOI: 10.1126/science.adg7942

Data was generated in a cohort of 113 COVID-19 patients and 39 healthy individual collected in 4 hospital in Zurich (Switzerland), during acute COVID-19 and at 6-month follow-up. 40 of the 113 COVID-19 patients experienced symptomatic long COVID at 6-month follow-up.
Files include:
- Clinical data and serum proteomics (SomaScan; SomaLogic, Boulder, CO, USA)
- Mass spectrometry
- Flow cytometry
- Single-cell transcriptomics
- VirScan data on protein and species level
- Annotated and original SDS-PAGE and Western Blot images

Original code (python) for analysis of SomaScan data is provided via GitHub: https://github.com/BorgwardtLab/LongCOVID or Zenodo (doi: 10.5281/zenodo.10022438).
DOI: 10.17632/jdjmg8s544
title: Intermittent aeolian saltation over a gobi surface

description: Synchronous high-frequency measurement of the two time series of 3-D wind speed (25Hz) and saltating particle count rate (1Hz) over a gobi surface (39°8.062´N, 88°59.967´E). Wind velocity was measured by two RM Young 81000 Ultrasonic anemometers, situated at respective heights of 0.7 and 2 m above the gobi surface at a time interval of 0.05 s, recorded by a Campbell CR 1000 datalogger. The profile of saltating grain number was measured by a vertical array of five piezoelectric impact sensors (H11-LIN, Sensit) at heights of 0.05, 0.12, 0.38, 0.8 and 1.38 m (geometric mean) above the gobi surface with a measurement frequency of 1 Hz, also recorded by a Campbell CR 1000 datalogger. The piezoelectric impact sensors at heights of 0.12, 0.8 and 1.38 m were in a vertical profile, while due to the bulk limitation sensors, the piezoelectric impact sensors at heights of 0.05 and 0.38 m were 0.34 m and 0.24 m horizontally apart, respectively, from the vertical array of the other three sensors. The vertical array of the piezoelectric impact sensors was located 0.53 m in the spanwise direction from the anemometer to minimize their influence on airflow. Aeolian saltation flux profiles over gobi were measured by a vertical array of BSNE sand traps deployed at heights of 0.025, 0.175, 0.285, 0.585, 1.155, 1.785 and 3.000 m (midpoints of the trap inlet) . A sand trap at the height of 0.275 m was separated 1.22 m horizontally from the left array to decrease the bulk effect of the sand traps from each other as rotating, while the sand trap at 0.025 m was put between the 0.275-m high sand trap and the vertical array and set flush with the gobi surface to measure the saltation flux on the surface, yet it could not rotate.
DOI: 10.15468/dl.75ragq
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bathytroctes Günther, 1878",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((9.2698 2.0276,9.1702 1.8496,17.9648 1.8496,17.9648 10.8496,8.9648 10.8496,8.9648 2.8113,8.9984 2.8234,9.2654 3.2175,9.4253 3.0783,9.2698 2.0276))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010469-250525065834625/datasets/export for details.
DOI: 10.57760/sciencedb.35804
title: HPRC samples R9.4.1 bam files (18)
title: HPRC samples R9.4.1 bam files (18)

description: Raw basecalled BAM files were downloaded from human pangenome reference consortium https://s3-us-west-2.amazonaws.com/human-pangenomics/index.html?prefix=working/.BAM files were re-aligned to the GRCh38 reference genome (GenBank assembly ID GCA_000001405.15) using Dorado v0.7.2 with command "dorado aligner -t 80 --mm2-preset "-x map-ont" ${reference.fa} ${input.bam} --output-dir ${outdir}/${output}", followed by catting, sorting , and indexing with Samtools.
description: Raw basecalled BAM files were downloaded from human pangenome reference consortium https://s3-us-west-2.amazonaws.com/human-pangenomics/index.html?prefix=working/.BAM files were re-aligned to the GRCh38 reference genome (GenBank assembly ID GCA_000001405.15) using Dorado v0.7.2 with command "dorado aligner -t 80 --mm2-preset "-x map-ont" ${reference.fa} ${input.bam} --output-dir ${outdir}/${output}", followed by catting, sorting , and indexing with Samtools.
DOI: 10.15468/dl.f9b4ub
title: Occurrence Download

description: A dataset containing 663 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Haemonchus contortus"
 ]
}

 The dataset includes 663 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006740-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ne7ym
title: Occurrence Download

description: A dataset containing 195 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Paranephelium xestophyllum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 195 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006739-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vu6ppc
title: Occurrence Download

description: A dataset containing 339 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mugil galapagensis",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLatitude is less than 90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2014"
 ]
}

 The dataset includes 339 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006741-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yw3p2u
title: Occurrence Download

description: A dataset containing 706719 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Mergellus albellus"
 ]
}

 The dataset includes 706719 records from 576 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006701-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5resvd
title: Occurrence Download

description: A dataset containing 13319 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((14.16751398 47.67898893, 14.55440852 47.67898893, 14.55440852 47.85659594, 14.16751398 47.85659594, 14.16751398 47.67898893))",
 "TaxonKey is one of (Bombina variegata, Actitis hypoleucos, Aegolius funereus, Aquila chrysaetos, Bonasa bonasia, Bubo bubo, Caprimulgus europaeus, Ciconia nigra, Circaetus gallicus, Columba oenas, Dendrocopos leucotos, Dryocopus martius, Falco peregrinus, Ficedula albicollis, Ficedula hypoleuca, Ficedula parva, Glaucidium passerinum, Lagopus muta, Lanius collurio, Muscicapa striata, Pernis apivorus, Picoides tridactylus, Picus canus, Scolopax rusticola, Tetrao tetrix, Tetrao urogallus, Cottus gobio, Austropotamobius torrentium, Cucujus cinnaberinus, Euphydryas aurinia, Euphydryas maturna, Euplagia quadripunctaria, Rosalia alpina, Stephanopachys substriatus, Barbastella barbastellus, Lutra lutra, Lynx lynx, Myotis bechsteinii, Myotis emarginatus, Myotis myotis, Rhinolophus hipposideros, Ursus arctos, Buxbaumia viridis, Cypripedium calceolus, Dicranum viride, Scapania carinthiaca)"
 ]
}

 The dataset includes 13319 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006742-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y9yefh
title: Occurrence Download

description: A dataset containing 12469 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Trigona fulviventris"
 ]
}

 The dataset includes 12469 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006743-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bqg9dh
title: Occurrence Download

description: A dataset containing 4811 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Paullinia pinnata",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 4811 records from 186 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006745-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u537qa
title: Occurrence Download

description: A dataset containing 371 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lile stolifera",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLatitude is less than 90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2014"
 ]
}

 The dataset includes 371 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006744-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17630/a9ed367a-b627-4841-9899-3ff11d72a0d1
title: The Reaction Mechanisms of Surface Confined Hydrogenation of Graphene Nanoribbons (thesis data)

description: HREEL files .OPJ
STM files .dat
STS files .VERT
data .xlsx
DOI: 10.5281/zenodo.18455707
title: Data from Large-Aperture Scintillometer (LAS) path measurements between Berlin – Charlottenburg (BECHAR) and Berlin – Mitte (BEMITT) from 2021-09-02 to 2022-07-21 [RAW]

description: Original data files from LAS measurements.
description: TECHNICAL INFO

No data quality control has been carried out. No gap-filling has been applied. Detailed information about the sites and deployments can be found in the urbisphere-Berlin campaign technical documentation.

Files are organised in sub-directories per year and day of year (DOY).

Version v1.0.3 fixes a damaged archive file in the v1.0.0 release.

COPYRIGHT NOTICE

Copyright Jörn Birkmann, Andreas Christen, Nektarios Chrysoulakis, and Sue Grimmond. Some rights reserved.

CREATOR NOTICE

This work is owned by the Principal Investigators (PIs) of the Urbisphere project.

ATTRIBUTION NOTICE

The [creation and] curation of this work has been funded by the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation programme (grant agreement No 855005).

DISCLAIMER NOTICE

The use of the work is at the user's own risk. The authors, the involved institutions, and/or the European Research Council accept no liability for material or non-material damage arising from the use or non-use or from the use of incorrect or incomplete information in this work. The authors, the involved institutions, and/or the European Research Council are not responsible for any use that may be made of the information in this work. The legal provisions remain unaffected.

MATERIAL NOTICE

The notices cover data in databases, text and images contained in the work.

MATERIAL URI

Urbisphere project
DOI: 10.5281/zenodo.10847373
title: Data from Large-Aperture Scintillometer (LAS) path measurements between Berlin – Charlottenburg (BECHAR) and Berlin – Mitte (BEMITT) from 2021-09-02 to 2022-07-21 [RAW]

description: Original data files from LAS measurements.
description: TECHNICAL INFO

No data quality control has been carried out. No gap-filling has been applied. Detailed information about the sites and deployments can be found in the urbisphere-Berlin campaign technical documentation.

Files are organised in sub-directories per year and day of year (DOY).

Version v1.0.3 fixes a damaged archive file in the v1.0.0 release.

COPYRIGHT NOTICE

Copyright Jörn Birkmann, Andreas Christen, Nektarios Chrysoulakis, and Sue Grimmond. Some rights reserved.

CREATOR NOTICE

This work is owned by the Principal Investigators (PIs) of the Urbisphere project.

ATTRIBUTION NOTICE

The [creation and] curation of this work has been funded by the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation programme (grant agreement No 855005).

DISCLAIMER NOTICE

The use of the work is at the user's own risk. The authors, the involved institutions, and/or the European Research Council accept no liability for material or non-material damage arising from the use or non-use or from the use of incorrect or incomplete information in this work. The authors, the involved institutions, and/or the European Research Council are not responsible for any use that may be made of the information in this work. The legal provisions remain unaffected.

MATERIAL NOTICE

The notices cover data in databases, text and images contained in the work.

MATERIAL URI

Urbisphere project