cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14551673.v1
title: Additional file 1 of AQP0 is a novel surface marker for deciphering abnormal erythropoiesis

description: Additional file 1: Figure S1. Characterization of erythropoiesis of patients using three surface markers (CD71, CD235a, and AQP0). Flow cytometry analysis of erythropoiesis of patient 1 (A), patient 2 (B), patient 3 (C), patient 4 (D), patient 5 (E), patient 6 (F), patient 7 (G), patient 8 (H), and patient 9 (I). Patient bone marrow cells were isolated and stained with anti-CD71 antibodies conjugated with PE/Cy7, anti-CD235a antibodies conjugated with FITC, and anti-AQP0 antibodies conjugated with Alexa Fluor 647. CD71−/dim/CD235a−/dim cells were gated as nonerythroid cells. CD71high/CD235alow, CD71high/CD235ahigh, CD71dim/CD235ahigh, and CD71−/CD235ahigh were defined as region 1 (R1), region 2 (R2), region 3 (R3), and region 4 (R4), respectively. R3 was gated, and the relationship between FSC (cell size) and AQP0 expression was analyzed.
DOI: 10.6084/m9.figshare.14551673
title: Additional file 1 of AQP0 is a novel surface marker for deciphering abnormal erythropoiesis

description: Additional file 1: Figure S1. Characterization of erythropoiesis of patients using three surface markers (CD71, CD235a, and AQP0). Flow cytometry analysis of erythropoiesis of patient 1 (A), patient 2 (B), patient 3 (C), patient 4 (D), patient 5 (E), patient 6 (F), patient 7 (G), patient 8 (H), and patient 9 (I). Patient bone marrow cells were isolated and stained with anti-CD71 antibodies conjugated with PE/Cy7, anti-CD235a antibodies conjugated with FITC, and anti-AQP0 antibodies conjugated with Alexa Fluor 647. CD71−/dim/CD235a−/dim cells were gated as nonerythroid cells. CD71high/CD235alow, CD71high/CD235ahigh, CD71dim/CD235ahigh, and CD71−/CD235ahigh were defined as region 1 (R1), region 2 (R2), region 3 (R3), and region 4 (R4), respectively. R3 was gated, and the relationship between FSC (cell size) and AQP0 expression was analyzed.
DOI: 10.6084/m9.figshare.14551680
title: Additional file 3 of Efficacy and safety of artemether–lumefantrine for treatment of uncomplicated Plasmodium falciparum malaria in Ethiopia: a systematic review and meta-analysis

description: Additional file 3. Quality assessment of included studies using Newcastle Ottawa Scale (NOS).
DOI: 10.6084/m9.figshare.14551683
title: Additional file 4 of Efficacy and safety of artemether–lumefantrine for treatment of uncomplicated Plasmodium falciparum malaria in Ethiopia: a systematic review and meta-analysis

description: Additional file 4. Quality assessment of included studies using Modified Jadad Scale.
DOI: 10.6084/m9.figshare.14551686.v1
title: Additional file 5 of Efficacy and safety of artemether–lumefantrine for treatment of uncomplicated Plasmodium falciparum malaria in Ethiopia: a systematic review and meta-analysis

description: Additional file 5. Safety outcomes of included studies.
DOI: 10.6084/m9.figshare.14551683.v1
title: Additional file 4 of Efficacy and safety of artemether–lumefantrine for treatment of uncomplicated Plasmodium falciparum malaria in Ethiopia: a systematic review and meta-analysis

description: Additional file 4. Quality assessment of included studies using Modified Jadad Scale.
DOI: 10.6084/m9.figshare.14551680.v1
title: Additional file 3 of Efficacy and safety of artemether–lumefantrine for treatment of uncomplicated Plasmodium falciparum malaria in Ethiopia: a systematic review and meta-analysis

description: Additional file 3. Quality assessment of included studies using Newcastle Ottawa Scale (NOS).
DOI: 10.6084/m9.figshare.14551686
title: Additional file 5 of Efficacy and safety of artemether–lumefantrine for treatment of uncomplicated Plasmodium falciparum malaria in Ethiopia: a systematic review and meta-analysis

description: Additional file 5. Safety outcomes of included studies.
DOI: 10.6084/m9.figshare.14551736
title: Additional file 1 of Development and implementation of a novel, mandatory competency-based medical education simulation program for pediatric emergency medicine faculty

description: Additional file 1. MD: Procedural Checklist. RN: Procedural Checklist.
DOI: 10.6084/m9.figshare.14551736.v1
title: Additional file 1 of Development and implementation of a novel, mandatory competency-based medical education simulation program for pediatric emergency medicine faculty

description: Additional file 1. MD: Procedural Checklist. RN: Procedural Checklist.
DOI: 10.6084/m9.figshare.14551760
title: Additional file 2 of Canadian national electrophysiology ablation registry report 2011–2016

description: Additional file 2:
DOI: 10.6084/m9.figshare.14551757.v1
title: Additional file 1 of Canadian national electrophysiology ablation registry report 2011–2016

description: Additional file 1:
DOI: 10.6084/m9.figshare.14551760.v1
title: Additional file 2 of Canadian national electrophysiology ablation registry report 2011–2016

description: Additional file 2:
DOI: 10.6084/m9.figshare.14551757
title: Additional file 1 of Canadian national electrophysiology ablation registry report 2011–2016

description: Additional file 1:
DOI: 10.6084/m9.figshare.14551755
title: Additional file 3 of Towards enhancing coral heat tolerance: a “microbiome transplantation” treatment using inoculations of homogenized coral tissues

description: Additional file 2: Dataset S1. Analysis table of coral response variables. ‘LowVar’ site = Racha Island east shore, ‘HighVar’ site (Pocillopora) = Racha Island west shore, ‘HighVar’ site (Porites) = Panwa reef flat; heat tolerance (HT) assessment treatments: ‘34 °C’ and ‘29 °C’; Inoculation treatments: ‘I’ = inoculation; ‘C’ = sterile-filtered seawater (FSW) control group; n = replicate fragment numbers; mean difference = mean difference between start and end of a treatment; SD = standard deviation; SE = standard error; CI = confidence interval.
DOI: 10.6084/m9.figshare.14551755.v1
title: Additional file 3 of Towards enhancing coral heat tolerance: a “microbiome transplantation” treatment using inoculations of homogenized coral tissues

description: Additional file 2: Dataset S1. Analysis table of coral response variables. ‘LowVar’ site = Racha Island east shore, ‘HighVar’ site (Pocillopora) = Racha Island west shore, ‘HighVar’ site (Porites) = Panwa reef flat; heat tolerance (HT) assessment treatments: ‘34 °C’ and ‘29 °C’; Inoculation treatments: ‘I’ = inoculation; ‘C’ = sterile-filtered seawater (FSW) control group; n = replicate fragment numbers; mean difference = mean difference between start and end of a treatment; SD = standard deviation; SE = standard error; CI = confidence interval.
DOI: 10.6084/m9.figshare.14551761
title: Additional file 5 of Towards enhancing coral heat tolerance: a “microbiome transplantation” treatment using inoculations of homogenized coral tissues

description: Additional file 4: Dataset S3. Full table of potentially transmitted bacteria in the (A) Pocillopora and (B) Porites experiment. Amplicon sequence variants (ASVs) exclusively shared between the inoculum and the ‘I’ recipient’ group after inoculation are provided each with their respective SILVA based taxonomy and sequence. Read abundances for each potentially transmitted ASV show its occurrence within the different treatment groups. ASVs are marked in ‘green’, when also detected in the donor samples. Those, also detected in seawater samples, are marked in ‘blue’. ASVs are marked in red, when detected in the ‘I’ recipient group at the end of heat tolerance reassessment (i.e., ASVs that persisted within the recipients’ microbiomes until the very end of the experiment).
DOI: 10.6084/m9.figshare.14551758
title: Additional file 4 of Towards enhancing coral heat tolerance: a “microbiome transplantation” treatment using inoculations of homogenized coral tissues

description: Additional file 3: Dataset S2. Analysis tables of microbiome data. Count tables are provided for (A) ‘filt-10’ data and (B) rarefied data (subsampled to 4 000 reads). Tables enclose read abundance counts per amplicon sequence variant (ASV), experiment metadata (i.e., treatment groups), and SILVA classification. TYPE = sample type; POC = Pocillopora; POR = Porites; SW = seawater. Timepoints include: t1 = start, t2 = end of inoculation, t3 = timepoint of water collection from the source tank during heat tolerance (HT) reassessment, t4 = end of HT reassessment. I = inoculation; C = FSW control group; H = heat exposure treatment 34 °C; A = ambient temperature treatment 29 °C.
DOI: 10.6084/m9.figshare.14551764.v1
title: Additional file 6 of Towards enhancing coral heat tolerance: a “microbiome transplantation” treatment using inoculations of homogenized coral tissues

description: Additional file 5: Dataset S4. Quality control samples and clean-up of microbiome data. Tables show host-origin and contaminant amplicon sequence variant (ASV) sequences that were removed from the microbiome data set prior to downstream analyses. (A) Table shows ASV sequences of host-origin as matched with GenBank (NCBI). (B) Table shows ASVs identified as contaminants using DNA Extraction Kit and PCR blank samples. Stacked bar charts show bacterial community compositions of (C) extraction kit blank samples and (D) PCR blank samples. Additionally, scoring tables for contaminant ASVs are shown.
DOI: 10.6084/m9.figshare.14551764
title: Additional file 6 of Towards enhancing coral heat tolerance: a “microbiome transplantation” treatment using inoculations of homogenized coral tissues

description: Additional file 5: Dataset S4. Quality control samples and clean-up of microbiome data. Tables show host-origin and contaminant amplicon sequence variant (ASV) sequences that were removed from the microbiome data set prior to downstream analyses. (A) Table shows ASV sequences of host-origin as matched with GenBank (NCBI). (B) Table shows ASVs identified as contaminants using DNA Extraction Kit and PCR blank samples. Stacked bar charts show bacterial community compositions of (C) extraction kit blank samples and (D) PCR blank samples. Additionally, scoring tables for contaminant ASVs are shown.
DOI: 10.6084/m9.figshare.14551770.v1
title: Additional file of Towards enhancing coral heat tolerance: a “microbiome transplantation” treatment using inoculations of homogenized coral tissues

description: Additional file of Towards enhancing coral heat tolerance: a “microbiome transplantation” treatment using inoculations of homogenized coral tissues
DOI: 10.6084/m9.figshare.14551758.v1
title: Additional file 4 of Towards enhancing coral heat tolerance: a “microbiome transplantation” treatment using inoculations of homogenized coral tissues

description: Additional file 3: Dataset S2. Analysis tables of microbiome data. Count tables are provided for (A) ‘filt-10’ data and (B) rarefied data (subsampled to 4 000 reads). Tables enclose read abundance counts per amplicon sequence variant (ASV), experiment metadata (i.e., treatment groups), and SILVA classification. TYPE = sample type; POC = Pocillopora; POR = Porites; SW = seawater. Timepoints include: t1 = start, t2 = end of inoculation, t3 = timepoint of water collection from the source tank during heat tolerance (HT) reassessment, t4 = end of HT reassessment. I = inoculation; C = FSW control group; H = heat exposure treatment 34 °C; A = ambient temperature treatment 29 °C.
DOI: 10.6084/m9.figshare.14551770
title: Additional file of Towards enhancing coral heat tolerance: a “microbiome transplantation” treatment using inoculations of homogenized coral tissues

description: Additional file of Towards enhancing coral heat tolerance: a “microbiome transplantation” treatment using inoculations of homogenized coral tissues
DOI: 10.6084/m9.figshare.14551782
title: Additional file 3 of Randomized phase II study of daily and alternate-day administration of S-1 for adjuvant chemotherapy in completely-resected stage I non-small cell lung cancer: results of the Setouchi Lung Cancer Group Study 1301

description: Additional file 3. Online Resource 3. Criteria for dose reduction.
DOI: 10.6084/m9.figshare.14551779
title: Additional file 2 of Randomized phase II study of daily and alternate-day administration of S-1 for adjuvant chemotherapy in completely-resected stage I non-small cell lung cancer: results of the Setouchi Lung Cancer Group Study 1301

description: Additional file 2. Online Resource 2. The criteria for discontinuation and restant of S-1 administration.
DOI: 10.6084/m9.figshare.14551785
title: Additional file 4 of Randomized phase II study of daily and alternate-day administration of S-1 for adjuvant chemotherapy in completely-resected stage I non-small cell lung cancer: results of the Setouchi Lung Cancer Group Study 1301

description: Additional file 4. Online Resource 4. Method for dose reduction of S-1.
DOI: 10.6084/m9.figshare.14551779.v1
title: Additional file 2 of Randomized phase II study of daily and alternate-day administration of S-1 for adjuvant chemotherapy in completely-resected stage I non-small cell lung cancer: results of the Setouchi Lung Cancer Group Study 1301

description: Additional file 2. Online Resource 2. The criteria for discontinuation and restant of S-1 administration.
DOI: 10.6084/m9.figshare.14551791
title: Additional file 6 of Randomized phase II study of daily and alternate-day administration of S-1 for adjuvant chemotherapy in completely-resected stage I non-small cell lung cancer: results of the Setouchi Lung Cancer Group Study 1301

description: Additional file 6. Online resourse 6. Follow-up assessment.
DOI: 10.6084/m9.figshare.14551782.v1
title: Additional file 3 of Randomized phase II study of daily and alternate-day administration of S-1 for adjuvant chemotherapy in completely-resected stage I non-small cell lung cancer: results of the Setouchi Lung Cancer Group Study 1301

description: Additional file 3. Online Resource 3. Criteria for dose reduction.
DOI: 10.6084/m9.figshare.14551821.v1
title: Additional file 4 of Transgenerational effect of mutants in the RNA-directed DNA methylation pathway on the triploid block in Arabidopsis

description: Additional file 4: Table S3. List of DMRi overlapping deregulated genes in 3x seeds.
DOI: 10.6084/m9.figshare.14551824
title: Additional file 5 of Transgenerational effect of mutants in the RNA-directed DNA methylation pathway on the triploid block in Arabidopsis

description: Additional file 5: Table S4. Genes with non-CG DMRi overlapping with non-CG hypo DMRs in endosperm of 3x seeds.
DOI: 10.6084/m9.figshare.14551818.v1
title: Additional file 3 of Transgenerational effect of mutants in the RNA-directed DNA methylation pathway on the triploid block in Arabidopsis

description: Additional file 3: Table S2. Lists of non-CG hypo DMRs.
DOI: 10.6084/m9.figshare.14551821
title: Additional file 4 of Transgenerational effect of mutants in the RNA-directed DNA methylation pathway on the triploid block in Arabidopsis

description: Additional file 4: Table S3. List of DMRi overlapping deregulated genes in 3x seeds.
DOI: 10.6084/m9.figshare.14551827
title: Additional file 6 of Transgenerational effect of mutants in the RNA-directed DNA methylation pathway on the triploid block in Arabidopsis

description: Additional file 6: Table S5. Genes losing and gaining non-CG methylation in endosperm of 3x and 3x nrpd1 seeds.
DOI: 10.6084/m9.figshare.14551824.v1
title: Additional file 5 of Transgenerational effect of mutants in the RNA-directed DNA methylation pathway on the triploid block in Arabidopsis

description: Additional file 5: Table S4. Genes with non-CG DMRi overlapping with non-CG hypo DMRs in endosperm of 3x seeds.
DOI: 10.6084/m9.figshare.14551827.v1
title: Additional file 6 of Transgenerational effect of mutants in the RNA-directed DNA methylation pathway on the triploid block in Arabidopsis

description: Additional file 6: Table S5. Genes losing and gaining non-CG methylation in endosperm of 3x and 3x nrpd1 seeds.
DOI: 10.6084/m9.figshare.14551956.v1
title: Additional file 1 of Short‐term changes in and preoperative factors affecting vaulting after posterior chamber phakic Implantable Collamer Lens implantation

description: Additional file 1.
DOI: 10.6084/m9.figshare.14551956
title: Additional file 1 of Short‐term changes in and preoperative factors affecting vaulting after posterior chamber phakic Implantable Collamer Lens implantation

description: Additional file 1.
DOI: 10.6084/m9.figshare.14551958
title: Additional file 1 of Behavioural synchrony between fallow deer Dama dama is related to spatial proximity

description: Additional file 1. Text file containing raw data, with a description of the coding given in the header of the file.
DOI: 10.6084/m9.figshare.14551961.v1
title: Additional file 2 of Behavioural synchrony between fallow deer Dama dama is related to spatial proximity

description: Additional file 2. Text file containing processed dataset, for use in R code.
DOI: 10.6084/m9.figshare.14551964
title: Additional file 3 of Behavioural synchrony between fallow deer Dama dama is related to spatial proximity

description: Additional file 3. R code for analyses.
DOI: 10.6084/m9.figshare.14551961
title: Additional file 2 of Behavioural synchrony between fallow deer Dama dama is related to spatial proximity

description: Additional file 2. Text file containing processed dataset, for use in R code.
DOI: 10.6084/m9.figshare.14551965.v1
title: Additional file 1 of Tumor reversion: a dream or a reality

description: Additional file 1.
DOI: 10.6084/m9.figshare.14551965
title: Additional file 1 of Tumor reversion: a dream or a reality

description: Additional file 1.
DOI: 10.6084/m9.figshare.14551958.v1
title: Additional file 1 of Behavioural synchrony between fallow deer Dama dama is related to spatial proximity

description: Additional file 1. Text file containing raw data, with a description of the coding given in the header of the file.
DOI: 10.6084/m9.figshare.14551964.v1
title: Additional file 3 of Behavioural synchrony between fallow deer Dama dama is related to spatial proximity

description: Additional file 3. R code for analyses.
DOI: 10.6084/m9.figshare.14551976.v1
title: Additional file 1 of Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

description: Additional file 1 Counts of number of traits within the categories energy, heart rate and movement at 25 and 30 °C with values either above or below the values predicted from Q10=2 applied to measurements at 20 °C
DOI: 10.6084/m9.figshare.14551976
title: Additional file 1 of Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

description: Additional file 1 Counts of number of traits within the categories energy, heart rate and movement at 25 and 30 °C with values either above or below the values predicted from Q10=2 applied to measurements at 20 °C
DOI: 10.6084/m9.figshare.14551979
title: Additional file 2 of Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

description: Additional file 2 Predicted (Q10=2) and observed trait values for movement, heart rate and energy during different periods of development in 25 and 30 °C.
DOI: 10.6084/m9.figshare.14551979.v1
title: Additional file 2 of Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

description: Additional file 2 Predicted (Q10=2) and observed trait values for movement, heart rate and energy during different periods of development in 25 and 30 °C.
DOI: 10.6084/m9.figshare.14551982
title: Additional file 3 of Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

description: Additional file 3 Overall levels of deviation in heart rate, energy and movement from Q10=2 predictions.
DOI: 10.6084/m9.figshare.14551982.v1
title: Additional file 3 of Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

description: Additional file 3 Overall levels of deviation in heart rate, energy and movement from Q10=2 predictions.
DOI: 10.6084/m9.figshare.14551985.v1
title: Additional file 4 of Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

description: Additional file 4 Individual deviation of heart rate, energy and movement traits from Q10=2 predictions during different periods of development at 25 and 30 °C.
DOI: 10.6084/m9.figshare.14551985
title: Additional file 4 of Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

description: Additional file 4 Individual deviation of heart rate, energy and movement traits from Q10=2 predictions during different periods of development at 25 and 30 °C.
DOI: 10.6084/m9.figshare.14551988
title: Additional file 5 of Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

description: Additional file 5 Principal component sample weightings from a PCA of mean EPT spectra for Radix balthica embryos cultured at 20, 25 and 30 °C at hourly time points.
DOI: 10.6084/m9.figshare.14551988.v1
title: Additional file 5 of Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

description: Additional file 5 Principal component sample weightings from a PCA of mean EPT spectra for Radix balthica embryos cultured at 20, 25 and 30 °C at hourly time points.
DOI: 10.6084/m9.figshare.14551991
title: Additional file 6 of Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

description: Additional file 6 Sample loadings for a T-distributed stochastic neighbour embedding (t-SNE) analysis performed on loadings from PCs1-50 from a PCA performed on hourly EPT spectra for Radix balthica cultured at 20, 25 and 30 °C.
DOI: 10.6084/m9.figshare.14551977
title: Additional file 2 of TORC1 regulates the transcriptional response to glucose and developmental cycle via the Tap42-Sit4-Rrd1/2 pathway in Saccharomyces cerevisiae

description: Additional file 2: Table S1. Comparison of Real-Time qRT-PCR data from 3 replicates for experiments discussed in Fig. 4 (Tab labelled PKA), Fig. 5 (Tab labelled sch9), Fig. 6 (Tab labelled tap42) and Fig. 7 (Tab labelled rrd1,2 sit4).
DOI: 10.6084/m9.figshare.14551991.v1
title: Additional file 6 of Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

description: Additional file 6 Sample loadings for a T-distributed stochastic neighbour embedding (t-SNE) analysis performed on loadings from PCs1-50 from a PCA performed on hourly EPT spectra for Radix balthica cultured at 20, 25 and 30 °C.
DOI: 10.6084/m9.figshare.14551994
title: Additional file 7 of Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

description: Additional file 7 Growth rate and total energy proxy trait levels for embryos maintained in different treatment temperatures.
DOI: 10.6084/m9.figshare.14551977.v1
title: Additional file 2 of TORC1 regulates the transcriptional response to glucose and developmental cycle via the Tap42-Sit4-Rrd1/2 pathway in Saccharomyces cerevisiae

description: Additional file 2: Table S1. Comparison of Real-Time qRT-PCR data from 3 replicates for experiments discussed in Fig. 4 (Tab labelled PKA), Fig. 5 (Tab labelled sch9), Fig. 6 (Tab labelled tap42) and Fig. 7 (Tab labelled rrd1,2 sit4).
DOI: 10.6084/m9.figshare.14551994.v1
title: Additional file 7 of Spectral phenotyping of embryonic development reveals integrative thermodynamic responses

description: Additional file 7 Growth rate and total energy proxy trait levels for embryos maintained in different treatment temperatures.