cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/9v399vh9bv
title: Zinc isotope fractionation during coprecipitation with amorphous iron (hydr)oxides

description: The dataset shows the result of Zn isotope fractionation and spectroscopy of a Zn2+ - Fe3+ coprecipitation experiment at ambient temperature. Summary of Zn isotope fractionation during adsorption or coprecipitation with typical Fe-oxide minerals are shown in Table 1. Chemical and Zn isotope result of Zn-Fe coprecipitation experiments and adsorption experiments are shown in Table 2. Shell by shell fitting results of the EXAFS spectrum of adsorption and coprecipitation samples are shown in Table 3. DFT-calculated structure parameters of Zn substituted ferrihydrite are shown in Table 4. Extracted Fe and Zn by different amount of 1M ammonium acetate at pH 5.0 are show in Table S1. Zn isotope composition for NOD-A-1 reported in previous studied and this study are shown in Table S2. Summary of Mössbauer parameters estimated for samples are shown in Table S3.
DOI: 10.6084/m9.figshare.26165470.v1
title: Data of Nonverbal communication of dual anchors in live streaming and its effects on sales

description: The data that used to preform the regression in the following paper.Jinghua Liu and Jichang Zhao*. Nonverbal communication of dual anchors in live streaming and its effects on sales. Journal of Retailing and Consumer Services, 2024(81),103972. https://doi.org/10.1016/j.jretconser.2024.103972.<br>Details of the data can be found in Readme.md. Any issues please feel free to contact jichang@buaa.edu.cn.<br>
DOI: 10.17632/g3tk3tdbwj
title: 2024_Liu_Flamier_et_al

description: Original image files for EMSAs and Western Blots for Liu, Flamier et al., 2024 "MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons".
DOI: 10.17632/k5sn5ydbmc
title: Global Wine Statistics Trained Neural Net

description: Dataset created by K. Anderson et al from Adelaide Univresity - Australy, used in some experiments for Industrial Data Analytics on University of Cuyo - Mendoza Argentina. All the algortims used for the prospective of world wine scenary are based in Professor Andersen dataset. See more about de dataset and trained neural netowrk on: A model of the world’s wine marketsGlyn Wittwera, Nick Bergerb, Kym Anderson "Centre for International Economic Studies, University of Australy, Adelaide . Call to rpalma@uncu.edu.ar if you need this dataset un R-Cran format. You can also get the trained neural net for harvest forecast.
DOI: 10.17632/kxkjzbvj7b
title: RQ + Engagement Readiness

description: From customer engagement readiness to perceived exhibition performance via relationship quality
DOI: 10.6084/m9.figshare.12219998.v1
title: Sleep and erectile dysfunction database

description: Poor sleep quality can cause localized endothelial dysfunction, leading to erectile dysfunction (ED). However, there is limited evidence on this potential relationship in a young population. <br>
DOI: 10.6084/m9.figshare.22339933.v1
title: Antimicrobial-resistant surveillance reports of 25 hospitals in Thailand in 2022

description: This is the data set for the study article "Local and timely antimicrobial resistance data for local and national actions: the early implementation of an automated tool for data analysis at local hospital level in Thailand" <br> Abstract of the article <strong>Background</strong> In low and middle-income countries (LMICs), hospitals can rarely utilize their own antimicrobial resistance (AMR) data in a timely manner. <strong>Objectives </strong> To evaluate the utility of local AMR data generated by an automated tool in the real-world setting <strong>Methods </strong> From 16 December 2022 to 10 January 2023, on behalf of the Health Administration Division, Ministry of Public Health (MoPH) Thailand, we trained 26 public tertiary-care and secondary-care hospitals to utilize the AutoMated tool for Antimicrobial resistance Surveillance System (AMASS) with their own microbiology and hospital admission data files via two online meetings, one face-to-face meeting and on-line support. All meetings were recorded on video, and feedback was analysed. <strong>Results</strong> Twenty-five hospitals successfully generated and shared the AMR reports with the MoPH by 28 February 2023. In 2022, the median frequency of hospital-origin bloodstream infections (BSI) caused by carbapenem-resistant <em>Escherichia coli</em> (CREC) was 129 (range 0-1204), carbapenem-resistant <em>Klebsiella pneumoniae</em> (CRKP) was 1306 (range 0-5432), and carbapenem-resistant <em>Acinetobacter baumannii</em> (CRAB) was 4472 (range 1460-11968) per 100,000 patients tested for hospital-origin BSI. The median number of all-cause in-hospital deaths with hospital-origin AMR BSI caused by CREC was 1 (range 0-18), CRKP was 10 (range 0-77) and CRAB was 56 (range 7-148). Participating hospitals found that the data obtained could be used to support their antimicrobial stewardship and infection prevention control programmes. <strong>Conclusions </strong> Local and timely AMR data is crucial for local and national actions. MoPH Thailand is inviting all 127 public tertiary-care and secondary-care hospitals to utilize the AMASS. Using any appropriate analytical software or tools, all hospitals in LMICs that have electronic data records should analyse and utilise their data for immediate actions. <br>
DOI: 10.6084/m9.figshare.3803709.v2
title: Protist Ribosomal Reference database (PR2) - SSU rRNA gene database

description: The Protist Ribosomal Reference database (PR<sup>2</sup>) provides a unique access to eukaryotic small sub-unit (SSU) ribosomal RNA and DNA sequences, with curated taxonomy. The database mainly consists of nuclear-encoded protistan sequences. However, metazoans, land plants, macrosporic fungi and eukaryotic organelles (mitochondrion, plastid and others) are also included because they are useful for the analysis of high-troughput sequencing data sets. Introns and putative chimeric sequences have been also carefully checked. Taxonomic assignation of sequences consists of eight unique taxonomic fields.<br><br><b>Files</b><br><br>The files provided are for use with Qiime or Mothur. Four files are provided.<br>* <b>pr2....fasta</b> contains all sequences in fasta format<br>* <b>pr2....tax</b> contains the taxonomy of each sequence<br>* <b>PR2 version notes.docx</b> contains the revision history<br>* <b>PR2 versions.xls</b> is a condensed list of the different versions<br><br><b>Current version</b> : 4.2 based on GenBank 203<br><br><b>Contributors<br><br></b>- Tristan Biard<br>- Margot Tragin<br>- Bente Edvardsen<br> <br><b>References</b><br>Guillou, L., Bachar, D., Audic, S., Bass, D., Berney, C., Bittner, L., Boutte, C. et al. 2013. The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy. <i>Nucleic Acids Res.</i> 41:D597–604.Edvardsen, B., Egge, E.S. & Vaulot, D. 2016. Diversity and distribution of haptophytes revealed by environmental sequencing and metabarcoding – a review. <i>Perspect. Phycol.</i> in press.Tragin, M., Lopes dos Santos, A., Christen, R. & Vaulot, D. 2016. Diversity and ecology of green microalgae in marine systems: an overview based on 18S rRNA gene sequences. <i>Perspect. Phycol.</i> in press. <br><br><br>
DOI: 10.6084/m9.figshare.6838016.v1
title: vanOverbeek-processed-indel-data

description: https://www.ncbi.nlm.nih.gov/pubmed/27499295<br>This folder contains processed data of indels reported by van Overbeek for the inDelphi work, using code from https://github.com/maxwshen/indelphi-dataprocessinganalysis.
DOI: 10.17632/4ztmr4wt9c
title: Has COVID-19 Increased Levels of Loneliness Within Society?

description: This survey aims to see if people are feeling more lonely now compared to before the COVID-19 pandemic. The survey also asks if people have been following COVID-19 restrictions in their area and whether or not they would support a second national lockdown in their country if one was deemed necessary.
DOI: 10.25452/figshare.plus.16510584.v1
title: Image collection for: First fossil-leaf floras from Brunei Darussalam show dipterocarp dominance in Borneo by the Pliocene

description: This dataset is the high-resolution image library of plant macrofossils from Brunei Darussalam that accompanies the following primary article. Please refer to the primary article for all details:<br><b>Wilf P, X Zou, MP Donovan, L Kocsis, A Briguglio, D Shaw, JWF Slik, JJ Lambiase. 2022. First fossil-leaf floras from Brunei Darussalam show dipterocarp dominance in Borneo by the Pliocene. <i>PeerJ</i> 10:e12949. </b><b>doi: </b> https://doi.org/10.7717/peerj.12949 <br>All filenames for fossil images begin with fossil locality and field number, as listed in Appendix 2 of the primary article, followed by time stamp data and/or sequence numbers. Please cite specimens using their UBDH repository numbers via lookup of the field numbers in Appendix 2.<br><b>Example</b> Filename: PW1501 5b (11102016 140433)<br>= Specimen 5, counterpart b, from fossil locality PW1501, photographed on 10 November 2016 at about 2:04 PM.From Appendix 2, this specimen has repository number<b> UBDH F00005b</b>.<br><br>The files are organized into zip archives as follows:<br><b>Field_photos_Brunei_fossils.zip</b>Field photos of fossils taken at the time of collection, when conditions permitted.<br><b>PW1501.zip</b>Lab photos of fossils from locality PW1501 at Berakas Beach, including CT reconstructions of a fossil dipterocarp fruit.<br><b>PW1501 FS1b CT raw data.zip<br></b>Raw CT images, merged tiff movies, and acquisition data for the fossil dipterocarp fruit from locality PW1501.<br><b>PW1502.zip<br></b>Lab photos of fossils from locality PW1502 at Berakas Beach.<br><b>PW1503.zip<br></b>Lab photos of fossils from locality PW1503 at Kampong Lugu.<br><b>Plates_1200dpi.zip</b>The macrofossil illustrations from the primary article, output at high resolution (1200-dpi low-compression jpegs).
DOI: 10.6084/m9.figshare.21814584.v1
title: 23. mox files - slow speed

description: This folder contains the .mox files for every child, walking at slow walking speed. The .mox files contain subject data (e.g. sex, body mass, knee and ankle width), marker position and force plate data, kinematic data (joint angles), kinetic data (GRF, joint moment, joint power) and EMG data (EMG is not described in this manuscript) generated by CAREN software (D-flow).
DOI: 10.6084/m9.figshare.24083637.v1
title: Doubletetal_rawdata.xlsx

description: Dataset including quantitative RT-PCR results for 14 viruses of honeybee (Apis mellifera) samples collecetd from 654 hives from Varroa destructor-free and Varroa destructor-infested areas in the UK, Scandinavia, New Zealand and Canada between 2010 and 2013.Dataset include sample localization, identifiers, presence or absence of Varroa mite in the region at the time of sampling, and for each virus, presence of absence as determined by qRT-PCR, ct value and virus genome equivalent as calculated from qRT-PCR.
DOI: 10.6084/m9.figshare.3544523.v1
title: Appendix A. Sampling localities, equilibrium simulations, and simulations with varying r.

description: Sampling localities, equilibrium simulations, and simulations with varying r.
DOI: 10.6084/m9.figshare.9873932.v1
title: Supplementary Material for: Influence of Buffers of Different pH and Composition on the Murine Skin Barrier, Epidermal Proliferation, Differentiation, and Inflammation

description: The pH of the skin is tightly regulated by endogenous buffering systems. We examined the influence of buffers of different pH and composition on skin barrier repair, pH, inflammation, and epidermal thickness/proliferation/differentiation. After tape-stripping in hairless mice buffers with pH 4–7 were applied in patch test chambers. After removal of the chambers, skin pH and transepidermal water loss (TEWL) were monitored for 24 h, and biopsies were taken for histology/immunohistology. Hairless mice showed a basal skin pH of about 5.8. Following barrier disruption and application of water, the pH increased by 0.6 units; increase in pH was reduced by the pH 4 glycolate buffer, unchanged by pH 4 citrate and pH 5.5 buffers, and even increased by the pH 7 buffer. pH 5.5, pH 4 citrate, and pH 4 glycolate buffers led to a slight, while the pH 7 buffer led to a significant increase in TEWL after barrier disruption compared to water. The pH 7 buffers led to a significant increase in epidermal thickness/proliferation/differentiation and inflammation after barrier disruption, whereas buffers with pH 4 and 5.5 caused a slight increase. In conclusion, only the pH 4 glycolate buffer significantly reduced the skin barrier disruption-related increase in skin pH. This was accompanied by only slight increase in epidermal thickness and inflammation compared to water. Application of the pH 7 buffer led to a significant increase in the skin pH, TEWL, epidermal thickness, and inflammation. The results are important for the formulation of topical products for effective acidification in pathological skin conditions.
DOI: 10.6084/m9.figshare.12172227.v1
title: Additional file 1 of Comparative cost-effectiveness of cabozantinib as second-line therapy for patients with advanced hepatocellular carcinoma in Germany and the United States

description: Additional file 1 Supporting data file. This excel file contains cited supporting information and supplementary material.
DOI: 10.6084/m9.figshare.19424780.v1
title: Zapisocki_et_al_data_scripts.zip

description: Statistical analysis (R script), tables and figures used in the publication: Zapisocki, Z., Murillo, R.A., Wagner, V. (in press) Non-Native Plant invasions in Prairie Grasslands of Alberta, Canada. Rangeland Ecology and Management.
DOI: 10.6084/m9.figshare.24500965.v2
title: Test Data Dummy CSV

description: This CSV represents a dummy dataset to test the functionality of trusted repository search capabilities and of research data governance practices. The associated dummy dissertation is entitled <i>Financial Econometrics Dummy Dissertation. </i>The dummy file is a 7KB CSV containing 5000 rows of notional demographic tabular data.
DOI: 10.6084/m9.figshare.28244012.v1
title: RSEC_MolsPerCell

description: Sample-level RSEC (UMI counts after recursive substitution error correction adjustment algorithm) count matrices generated via BD Rhapsody pipeline.
DOI: 10.6084/m9.figshare.28759355.v1
title: WorldMove Dataset

description: WorldMove is an open-access worldwide human mobility dataset, we follow a generative AI-based approach to create a large-scale mobility dataset for cities worldwide. Our method leverages publicly available multi-source data, including population distribution, points of interest (POIs), and synthetic commuting origin-destination flow datasets, to generate realistic city-scale mobility trajectories.
DOI: 10.6084/m9.figshare.12866897.v1
title: Figure 6 and 7 from manuscript Sparsely-Connected Autoencoder (SCA) for single cell RNAseq data mining

description: Dataset used to generate figure 6 and 7.<br>Figure 6: Analysis of human breast cancer (Block A Section 1), from 10XGenomics Visium Spatial Gene Expression 1.0.0. demonstration samples. A) SIMLR partitioning in 9 clusters (figure6and7/HBC_BAS1/Results_simlr/raw-counts/HBC_BAS1_expr-var-ann_matrix/9/HBC_BAS1_expr-var-ann_matrix_Stability_Plot.pdf). B) Cell stability score plot for SIMLR clusters in A (figure6and7/HBC_BAS1/Results_simlr/raw-counts/HBC_BAS1_expr-var-ann_matrix/9/HBC_BAS1_expr-var-ann_matrix_Stability_Plot.pdf. C) SIMLR clusters location in the tissue section (figure6and7/HBC_BAS1/Results_simlr/raw-counts/HBC_BAS1_expr-var-ann_matrix/9/HBC_BAS1_expr-var-ann_matrix_spatial_Stability.pdf). D) Hematoxylin and eosin image (figure6and7/HBC_BAS1/spatial/V1_Breast_Cancer_Block_A_Section_1_image.tif).<br>Figure 6: Analysis of human breast cancer (Block A Section 1), from 10XGenomics Visium Spatial Gene Expression 1.0.0. demonstration samples. A) SIMLR partitioning in 9 clusters (figure6and7/HBC_BAS1/Results_simlr/raw-counts/HBC_BAS1_expr-var-ann_matrix/9/HBC_BAS1_expr-var-ann_matrix_Stability_Plot.pdf). B) Cell stability score plot for SIMLR clusters in A (figure6and7/HBC_BAS1/Results_simlr/raw-counts/HBC_BAS1_expr-var-ann_matrix/9/HBC_BAS1_expr-var-ann_matrix_Stability_Plot.pdf. C) SIMLR clusters location in the tissue section (figure6and7/HBC_BAS1/Results_simlr/raw-counts/HBC_BAS1_expr-var-ann_matrix/9/HBC_BAS1_expr-var-ann_matrix_spatial_Stability.pdf). D) Hematoxylin and eosin image (figure6and7/HBC_BAS1/spatial/V1_Breast_Cancer_Block_A_Section_1_image.tif).<br><br>Figure 7: Information contents extracted by SCA analysis using a TF-based latent space. A) QCC (figure6and7/HBC_BAS1/Results_simlr/raw-counts/HBC_BAS1_expr-var-ann_matrix/9/HBC_TF_SIMLRV2/9/HBC_BAS1_expr-var-ann_matrix_stabilityPlot.pdf). B) QCM (figure6and7/HBC_BAS1/Results_simlr/raw-counts/HBC_BAS1_expr-var-ann_matrix/9/HBC_TF_SIMLRV2/9/HBC_BAS1_expr-var-ann_matrix_stabilityPlotUNBIAS.pdf). C) QCM/QCC plot, where only cluster 7 show, for the majority of the cells, both QCC and QCM greater than 0.5 (figure6and7/HBC_BAS1/Results_simlr/raw-counts/HBC_BAS1_expr-var-ann_matrix/9/HBC_TF_SIMLRV2/9/HBC_BAS1_expr-var-ann_matrix_StabilitySignificativityJittered.pdf). D) COMET analysis of SCA latent space. SOX5 was detected as first top ranked gene specific for cluster 7, using as input for COMET the latent space frequency table (figure6and7/HBC_BAS1/Results_simlr/raw-counts/HBC_BAS1_expr-var-ann_matrix/9/outputvis/cluster_7_singleton/rank_1.png). Input counts table for SCA analysis is made by raw counts.<br><br><br>
DOI: 10.6084/m9.figshare.21151075.v1
title: Parasitic manipulation, or side-effects? The effects of past Toxoplasma and Borrelia infections on personality and cognitive performance of humans are not mediated by impaired health - Data set

description: Data set for the paper Bacteria <em>Borrelia burgdorferi</em> <em>s. l.</em>, and especially protozoan <em>Toxoplasma gondii</em>, are known to affect the behavior of their animal and human hosts. Both pathogens infect a large fraction of humans, and both survive in the host’s organism for a very long time. The resulting latent infections were considered asymptomatic from a clinical point of view. However, in the last decade, a growing number of studies has shown that this view may be wrong and that both infections can have many adverse effects on the health of patients. Therefore, the specific behavioral effects of the infections might be just side-effects of the general impairment of the health of patients. Here we tested this hypothesis on the cohort of 7,762 members of the internet population using a 2-hours survey consisting of a panel of questionnaires and performance tests. We confirmed that subjects infected with <em>Toxoplasma</em> had worse physical and mental health and those infected with <em>Borrelia</em> had worse physical health than the corresponding controls. Infected and noninfected subjects also differed in several personality traits (conscientiousness, pathogen disgust, injury disgust, Machiavellianism, narcissism, tribalism, anti-authoritarianism, intelligence, reaction time, and precision). Most of the behavioral effects associated with <em>Borrelia</em> infection were the same as those associated with <em>Toxoplasma </em>infection; however, some of them dramatically differed, e.g., the performance in the Stroop test. Path analyses and nonparametric partial Kendall correlation tests showed that these effects were not mediated by the impaired health of the infected individuals. The results therefore contradicted the predictions of the side-effects hypothesis. Keywords: toxoplasmosis; borreliosis; manipulation hypothesis; big five; dark triad; disgust; Stroop test; Meili test; memory; intelligence; political attitudes; side-effects hypothesis
DOI: 10.6084/m9.figshare.718155.v1
title: Complex Processes and 3D Printing SourceCode on June 13 2013

description: The source code for Scuplexity project as of June, 2013. For a more recent build please find the code repository at https://github.com/doreiss/3D_Print.
DOI: 10.17632/7bbc63c5d3
title: Data for: Measuring the impact of transformative consumer research: The relational engagement approach as a promising avenue

description: citation and altmetric data on TCR and non-TCR articles
DOI: 10.17632/gf9dc6zxdx
title: Accelerating Early Math Learning with Research-Based Personalized Learning Games

description: The data were collected as part of a randomized control trial designed to evaluate the effectiveness of a digital math program for young children (PreK, Kindergarten). Students were assessed using items selected from TEMA-3 before and after using the program. Teacher survey data were collected after they used the program. Hierarchical linear models examining the effect of the intervention on students' math achievement highlighted the impact of the program on math skills. Teacher feedback corroborated the assessment data; teachers also indicated the value of the program as an engaging, easy-to-use learning resource they would continue to use in the classroom.
DOI: 10.6084/m9.figshare.9975935.v1
title: footprinting.zip

description: Output folder of TOBIAS software (https://github.com/loosolab/TOBIAS/), exemplary used to analyze Hendrikson et al. 2107 <br>
DOI: 10.17632/kw2s52jx2v
title: COVID-19 Pneumonia

description: This data set is used for the article "Predictive value of chest CT score in assessing disease severity and short-term mortality in COVID-19 pneumonia: experience of a tertiary care center"
DOI: 10.17632/skbxx8jwz2
title: Domestic electricity consumptions, renewable electricity generation, GDP and population for Egypt, Algeria, Nigeria and South Africa

description: This file contains annual data spanning 1990-2019 on domestic electricity consumptions, renewable electricity generation, GDP and population for Egypt, Algeria, Nigeria and South Africa. It also contains volatility-consistent pathways to 100% renewble electricity generation for each country; the data spans 2020-2030.
DOI: 10.17632/t75bxh469t
title: Dataset: coffee capsule brand analysis

description: This dataset contains the results from an online questionnaire conducted to investigate coffee capsule behaviors among Portuguese adults, with a particular emphasis on brand-related aspects. The questionnaire was mainly distributed on social media. The dataset is presented in an Excel spreadsheet file.
DOI: 10.6084/m9.figshare.29085014.v1
title: 大肠杆菌（MJ20240422426） - 12 - 1.zip

description: 大肠杆菌代谢组数据
DOI: 10.6084/m9.figshare.3168874.v1
title: NARA_Research_Communism.xlsx

description: Research Project
DOI: 10.17632/9c3dth6cwp
title: Relational and interactional dynamic network data from Czech lower-secondary school students

description: This dataset contains data on friendships and group work interactions among a convenience sample of 276 Czech Grade 6 students from twelve classrooms, supported by student-level demographic, literacy, motivation, and classroom communication data. Gathered longitudinally at the beginning and end of the 2021/2022 school year, the data provide a relational insight into the nature and evolution of early adolescents' friendships. Moreover, the data provide a unique relational and temporal insight into the verbal interaction of students during classroom group work. This dataset constitutes a valuable resource for educational researchers interested in studying classroom group work as well as for social network scientists studying dynamic social networks.

A Data in Brief article providing detailed information on how the data were collected, what the content of the files is, and how the data might be re-used has been submitted.

Compared to the Data in Brief article, this version (3) contains two updates. First, both on-task and off-task communication is included. As a result, in the interactional data.xlsx file, a new column - type - denoting the type of interaction is included. Second, student attributes contain also data on student grades from the Czech language classes, with grade 1 denoting the best grade and grade 5 the worst.