cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14073722
title: Replication Package for "A Call for Critically Rethinking and Reforming Data Analysis in Empirical Software Engineer"

description: Content Overview

This replication package contains the following materials:

- Data: RAW Focus Group Datasets and Aggregated Results

For any issues, questions, or further assistance, please do not hesitate to contact the paper's authors. We are here to help!
DOI: 10.5281/zenodo.14073723
title: Replication Package for "A Call for Critically Rethinking and Reforming Data Analysis in Empirical Software Engineer"

description: Content Overview

This replication package contains the following materials:

- Data: RAW Focus Group Datasets and Aggregated Results

For any issues, questions, or further assistance, please do not hesitate to contact the paper's authors. We are here to help!
DOI: 10.15468/dl.ekzmpa
title: Occurrence Download

description: A dataset containing 6334 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC-BY 4.0, CC-BY-NC 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Pinus palustris Mill."
 ]
}

 The dataset includes 6334 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007864-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bkufew
title: Occurrence Download

description: A dataset containing 12635 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "Geometry POLYGON((-85.88941 44.95704,-85.89664 44.93933,-85.86446 44.92361,-85.82804 44.9286,-85.81157 44.93434,-85.7991 44.94631,-85.79735 44.96078,-85.88941 44.95704))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 12635 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007863-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8f8xwq
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rattus norvegicus (Berkenhout, 1769)",
 "Country is New Caledonia",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 28 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007865-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tmndba
title: Occurrence Download

description: A dataset containing 87447 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Bidens coronata Fisch. ex Steud., 1840, Bidens crocata Cav., Bidens cuneata Sherff, Bidens pinnata Noronha, Bidens rotata Sherff, Bidens frondosa L., Bidens frondosa Buch.-Ham., Bidens frondosa Buch.-Ham. ex Hook.fil., Bidens subalternans DC., Bidens vulgata Greene)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 87447 records from 1035 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007858-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.477w33
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Imparfinis pristos Mees & Cala, 1989"
 ]
}

 The dataset includes 85 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044489-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b5rmy4
title: Occurrence Download

description: A dataset containing 14452 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is EOD – eBird Observation Dataset",
 "TaxonKey is Peucedramidae",
 "Year 2007-2021"
 ]
}

 The dataset includes 14452 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052839-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25939990
title: Additional file 1 of Functional annotation and meta-analysis of maize transcriptomes reveal genes involved in biotic and abiotic stress

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.25939990.v1
title: Additional file 1 of Functional annotation and meta-analysis of maize transcriptomes reveal genes involved in biotic and abiotic stress

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.25939993
title: Additional file 2 of Functional annotation and meta-analysis of maize transcriptomes reveal genes involved in biotic and abiotic stress

description: Supplementary Material 2
DOI: 10.15468/dl.d9mnlg
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mops demonstrator (Thomas, 1903)"
 ]
}

 The dataset includes 101 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006742-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ufx5sx
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Lychnaspis Haeckel, 1862, Lithoptera J.Müller, 1858, Amphilithium Haeusler, 1881)"
 ]
}

 The dataset includes 26 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044479-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25940002.v1
title: Additional file 5 of Functional annotation and meta-analysis of maize transcriptomes reveal genes involved in biotic and abiotic stress

description: Supplementary Material 5
DOI: 10.15468/dl.kq6vct
title: Occurrence Download

description: A dataset containing 247 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saurorhynchus Reis, 1892"
 ]
}

 The dataset includes 247 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0339674-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mlypgl
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acipenser oxyrinchus Mitchill, 1815",
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is less than or equal to 1980"
 ]
}

 The dataset includes 82 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006742-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7hf9a9
title: Occurrence Download

description: A dataset containing 136 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anolis naufragus (Campbell, Hillis & Lamar, 1989)"
 ]
}

 The dataset includes 136 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040988-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25940002
title: Additional file 5 of Functional annotation and meta-analysis of maize transcriptomes reveal genes involved in biotic and abiotic stress

description: Supplementary Material 5
DOI: 10.15468/dl.f3gwvj
title: Occurrence Download

description: A dataset containing 1468 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "Geometry POLYGON((113 22,114 22,114 24,113 24,113 22))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "TaxonKey is Egretta T.Forster, 1817",
 "TaxonKey is Centropus sinensis (Stephens, 1815)",
 "TaxonKey is Gekko gecko (Linnaeus, 1758)",
 "TaxonKey is Papilio paris Linnaeus, 1758"
 ]
 }
 ]
}

 The dataset includes 1468 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0339666-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25940005
title: Additional file 6 of Functional annotation and meta-analysis of maize transcriptomes reveal genes involved in biotic and abiotic stress

description: Supplementary Material 6
DOI: 10.15468/dl.4ng2ty
title: Occurrence Download

description: A dataset containing 2877 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Derbesiaceae"
 ]
}

 The dataset includes 2877 records from 148 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064905-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mscpw2
title: Occurrence Download

description: A dataset containing 619 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hylocharis xantusii (Lawrence, 1861)"
 ]
}

 The dataset includes 619 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057855-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.chdgmy
title: Occurrence Download

description: A dataset containing 566 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Osmolindsaea odorata (Roxb.) Lehtonen & Christenh."
 ]
}

 The dataset includes 566 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047282-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3yyxrs
title: Occurrence Download

description: A dataset containing 2037 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Bassariscus astutus (Lichtenstein, 1830)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2037 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027185-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.87wbcp
title: Occurrence Download

description: A dataset containing 28652 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gambusia holbrooki Girard, 1859"
 ]
}

 The dataset includes 28652 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006742-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dkgq8f
title: Occurrence Download

description: A dataset containing 135 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Manis pentadactyla Linnaeus, 1758"
 ]
}

 The dataset includes 135 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047295-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n39th9
title: Occurrence Download

description: A dataset containing 671 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Japan",
 "GadmGid is JPN.29_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Polypodiales",
 "Year 1990-2020"
 ]
}

 The dataset includes 671 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052888-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5yu8tw
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 2002-2019",
 "Geometry POLYGON((116.35146 -21.08339,121.92636 -21.08339,121.92636 -19.62387,116.35146 -19.62387,116.35146 -21.08339))",
 "TaxonKey is Natator depressus (Garman, 1880)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 65 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006742-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aa1dgq
title: Occurrence Download

description: A dataset containing 145 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Cecropia concolor Willd.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 145 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004346-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yz00gw
title: Occurrence Download

description: A dataset containing 1772 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fulgensia fulgens (Sw.) Elenkin"
 ]
}

 The dataset includes 1772 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004346-190307172214381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yb9nws
title: Occurrence Download

description: A dataset containing 1837 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aquilegia pyrenaica Rchb."
 ]
}

 The dataset includes 1837 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006742-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z7gne8
title: Occurrence Download

description: A dataset containing 5109 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is EOD – eBird Observation Dataset",
 "TaxonKey is Phylloscopidae",
 "Year 2007-2021"
 ]
}

 The dataset includes 5109 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052827-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ml8nzm
title: Occurrence Download

description: A dataset containing 233 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Motacilla samveasnae J.W.Duckworth, Alstrom, P.Davidson, T.D.Evans, C.M.Poole, T.Setha & R.J.Timmins, 2001"
 ]
}

 The dataset includes 233 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004346-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bf726f
title: Occurrence Download

description: A dataset containing 30933 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coenagrion mercuriale (Charpentier, 1840)"
 ]
}

 The dataset includes 30933 records from 262 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080179-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25939996
title: Additional file 3 of Functional annotation and meta-analysis of maize transcriptomes reveal genes involved in biotic and abiotic stress

description: Supplementary Material 3
DOI: 10.15468/dl.htjl9k
title: Occurrence Download

description: A dataset containing 2578 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hemidactylus platyurus (Schneider, 1797)"
 ]
}

 The dataset includes 2578 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000423-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25940008.v1
title: Additional file 7 of Functional annotation and meta-analysis of maize transcriptomes reveal genes involved in biotic and abiotic stress

description: Supplementary Material 7
DOI: 10.15468/dl.3bugfs
title: Occurrence Download

description: A dataset containing 4049 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((86.90597 12.36951,153.12881 12.36951,153.12881 52.75624,86.90597 52.75624,86.90597 12.36951))",
 "HasCoordinate is true",
 "TaxonKey is Cyrtomium fortunei J.Sm.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4049 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012841-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6k84wj
title: Occurrence Download

description: A dataset containing 224 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepidium papilliferum (L.F.Hend.) A.Nelson & J.F.Macbr."
 ]
}

 The dataset includes 224 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063407-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dvuabj
title: Occurrence Download

description: A dataset containing 35643 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Netta erythrophthalma (Wied-Neuwied, 1833)"
 ]
}

 The dataset includes 35643 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052885-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a4a5du
title: Occurrence Download

description: A dataset containing 313 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meteorium subpolytrichum (Besch.) Broth."
 ]
}

 The dataset includes 313 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080180-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c4ztjm
title: Occurrence Download

description: A dataset containing 62 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lejeunea oligoclada Spruce"
 ]
}

 The dataset includes 62 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040989-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e02kha
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is A global database for the distributions of crop wild relatives",
 "HasCoordinate is true",
 "TaxonKey is Cicer fedtschenkoi Lincz.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000423-190307172214381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.esw5qd
title: Occurrence Download

description: A dataset containing 200 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 "Country is Mexico",
 "HasCoordinate is true",
 "TaxonKey is Sesamum indicum L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 200 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024814-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v288jw
title: Occurrence Download

description: A dataset containing 7904 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-142.82694 17.18177,-30.27375 17.18177,-30.27375 62.18177,-142.82694 62.18177,-142.82694 17.18177))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Halyomorpha halys (Stål, 1855)"
 ]
}

 The dataset includes 7904 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087508-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mkr87z
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Dendrobium aurantiacum var. denneanum (Kerr) Z.H.Tsi"
 ]
}

 The dataset includes 68 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052893-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d4by7p
title: Occurrence Download

description: A dataset containing 97220 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Canis lupus Linnaeus, 1758"
 ]
}

 The dataset includes 97220 records from 346 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019314-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.brshay
title: Occurrence Download

description: A dataset containing 33848 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gelidiaceae"
 ]
}

 The dataset includes 33848 records from 241 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064912-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.