cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13356740
title: Mass Spectrometry Imaging of Untreated Wet Cell Membranes in Solution Using Single-Layer Graphene

description: We reported on how atomic and molecular secondary ions can be sputtered through single-layer graphene so that untreated wet cell membranes in a solution can be imaged by secondary ion mass spectrometry (SIMS) at subcellular spatial resolution. We observed intrinsic molecular distributions of lipids, such as cholesterol, phosphoethanolamine, and various fatty acids, in untreated wet cell membranes without any labeling. Cell viability assay, optical imaging, and time-lapse SIMS imaging showed that graphene-covered cells on a wet substrate with a cell culture media reservoir were not dead and at least their cellular membranes were not disintegrated during SIMS imaging in an ultra-high vacuum environment. Ion dose dependence studies and Ab-initio molecular dynamic (AIMD) calculations suggest that sputtering through single-layer graphene occurs through a transient hole generated in the graphene layer. Cholesterol imaging of cell membranes showed that methyl-β-cyclodextrin (MβCD) preferentially extracts cholesterol molecules from the cholesterol-enriched regions.
DOI: 10.25403/upresearchdata.13338830
title: The complexity of childbearing on the career advancement of women in senior leadership in South Africa

description: Datasets that underpins the research study. Qualitative method was adopted hence, transcripts from interviews were uploaded.
DOI: 10.25403/upresearchdata.13338830.v1
title: The complexity of childbearing on the career advancement of women in senior leadership in South Africa

description: Datasets that underpins the research study. Qualitative method was adopted hence, transcripts from interviews were uploaded.
DOI: 10.15479/at:ista:8951
title: Sequences of gene regulatory network permutations for the article "Local genetic context shapes the function of a gene regulatory network"

description: Gene expression levels are influenced by multiple coexisting molecular mechanisms. Some of these interactions, such as those of transcription factors and promoters have been studied extensively. However, predicting phenotypes of gene regulatory networks remains a major challenge. Here, we use a well-defined synthetic gene regulatory network to study how network phenotypes depend on local genetic context, i.e. the genetic neighborhood of a transcription factor and its relative position. We show that one gene regulatory network with fixed topology can display not only quantitatively but also qualitatively different phenotypes, depending solely on the local genetic context of its components. Our results demonstrate that changes in local genetic context can place a single transcriptional unit within two separate regulons without the need for complex regulatory sequences. We propose that relative order of individual transcriptional units, with its potential for combinatorial complexity, plays an important role in shaping phenotypes of gene regulatory networks.
DOI: 10.5281/zenodo.4382015
title: Transcription regulator ACTR contributes pathogenicity through mediating ACT toxin synthesis gene ACTS4 in Alternaria alternata

description: Host-selective ACT toxin are critical for the pathogenesis of the citrus fungal pathogen <em>Alternaria alternata</em>. The biosynthesis of ACT toxin is mainly regulated by multiple ACT toxin genes located in the secondary metabolite gene cluster. However, the regulatory hierarchy of ACT toxin synthesis by these ACT genes have not been explored. In this study, we reported a transcription regulator <em>ACTR</em> contributes ACT toxin biosynthesis through mediating ACT toxin synthesis gene ACTS4 in <em>Alternaria alternata.</em> We generated <em>ACTR</em>-disrupted and -silenced mutants in the tangerine pathotype of <em>A. alternata.</em> Phenotype analysis showed that the <em>ACTR</em> mutants displayed a significant loss of ACT toxin production and a decreased virulence on citrus leaves whereas the vegetative growth and sporulation were not affected, indicating an essential role of <em>ACTR</em> in both ACT toxin biosynthesis and pathogenicity. To elucidate the transcription network of ACTR, we performed RNA-Seq experiments on wild-type and <em>ACTR</em> null mutant and identified genes that were differentially expressed between two genotypes. Transcriptome profiling and RT-qPCR analysis demonstrated that the ACT toxin biosynthetic gene <em>ACTS4</em> is down-regulated in<em> ACTR </em>mutant<em>.</em> We generated <em>ACTS4 </em>knock-down mutant and found that the pathogenicity of <em>ACTS4</em> mutant was severely impaired. Interestingly, both <em>ACTR</em> and <em>ACTS4</em> are not involved in the response to different abiotic stresses including oxidative stress, salt stress, cell-wall disrupting regents, and Cu<sup>2+</sup>, indicating the function of these two genes is highly specific. In conclusion, our results highlight the important regulatory role of <em>ACTR</em> in ACT toxin biosynthesis through mediating ACT toxin synthesis gene ACTS4 and underline the essential role of in the tangerine pathotype of <em>A. alternata</em>.
DOI: 10.5281/zenodo.4382014
title: Transcription regulator ACTR contributes pathogenicity through mediating ACT toxin synthesis gene ACTS4 in Alternaria alternata

description: Host-selective ACT toxin are critical for the pathogenesis of the citrus fungal pathogen <em>Alternaria alternata</em>. The biosynthesis of ACT toxin is mainly regulated by multiple ACT toxin genes located in the secondary metabolite gene cluster. However, the regulatory hierarchy of ACT toxin synthesis by these ACT genes have not been explored. In this study, we reported a transcription regulator <em>ACTR</em> contributes ACT toxin biosynthesis through mediating ACT toxin synthesis gene ACTS4 in <em>Alternaria alternata.</em> We generated <em>ACTR</em>-disrupted and -silenced mutants in the tangerine pathotype of <em>A. alternata.</em> Phenotype analysis showed that the <em>ACTR</em> mutants displayed a significant loss of ACT toxin production and a decreased virulence on citrus leaves whereas the vegetative growth and sporulation were not affected, indicating an essential role of <em>ACTR</em> in both ACT toxin biosynthesis and pathogenicity. To elucidate the transcription network of ACTR, we performed RNA-Seq experiments on wild-type and <em>ACTR</em> null mutant and identified genes that were differentially expressed between two genotypes. Transcriptome profiling and RT-qPCR analysis demonstrated that the ACT toxin biosynthetic gene <em>ACTS4</em> is down-regulated in<em> ACTR </em>mutant<em>.</em> We generated <em>ACTS4 </em>knock-down mutant and found that the pathogenicity of <em>ACTS4</em> mutant was severely impaired. Interestingly, both <em>ACTR</em> and <em>ACTS4</em> are not involved in the response to different abiotic stresses including oxidative stress, salt stress, cell-wall disrupting regents, and Cu<sup>2+</sup>, indicating the function of these two genes is highly specific. In conclusion, our results highlight the important regulatory role of <em>ACTR</em> in ACT toxin biosynthesis through mediating ACT toxin synthesis gene ACTS4 and underline the essential role of in the tangerine pathotype of <em>A. alternata</em>.
DOI: 10.6084/m9.figshare.13468971.v1
title: Table S2. Lithofacies description. Were springline carbonates in the Kurkur–Dungul area (Southern Egypt) deposited during glacial periods?

description: Table S2. Lithofacies description.
DOI: 10.6084/m9.figshare.13468971
title: Table S2. Lithofacies description. Were springline carbonates in the Kurkur–Dungul area (Southern Egypt) deposited during glacial periods?

description: Table S2. Lithofacies description.
DOI: 10.6084/m9.figshare.13468995.v1
title: Table S3. Stable isotope microfacies and age data. Were springline carbonates in the Kurkur–Dungul area (Southern Egypt) deposited during glacial periods?

description: Table S3. Stable isotope microfacies and age data.
DOI: 10.6084/m9.figshare.13468995
title: Table S3. Stable isotope microfacies and age data. Were springline carbonates in the Kurkur–Dungul area (Southern Egypt) deposited during glacial periods?

description: Table S3. Stable isotope microfacies and age data.
DOI: 10.5286/isis.e.rb2010696-3
title: Tracking dynamics dampening during CO2-mineralisation to Mg-cements

description: Magnesite is essential to fertilizer, paper, glass, construction; most recently as eco-cement, at Mt-Gt scales. Mg2+ sources are plentiful recoverable via mineral carbonation of Mg-silicate, whose deposits are @ 10^5 Gt with magnesite being the most stable Mg-carbonate. Yet, MgCO3-mineralisation is retarded by Mg-dehydration. Industrially magnesite is produced with high-T/P condition, unlike ambient formation in nature, accelerated by impurities in ground water (HS-, SiO4-2, RCOO-), as-yet irreproducible in the lab. Geochemical evidence indicates these electrolyte solutions catalysing magnesite formation in its 3 principal steps: 1.Mg-dehydration, 2. Nucleation, 3. growth. We propose to undertake the 1st ever neutron measurements of in-situ Mg-carbonation in industrially relevant slurries. Herein, QENS will probe changing low energy modes throughout magnesite formation
DOI: 10.5281/zenodo.4382033
title: Gap filled GEBA data

description: Global (diffuse and direct) shortwave downwelling radiation at the surface between year 1961 and 2014. A total of ~1400 ground stations from GEBA archive has been selected and been through the machine learning technique "random forests" (Breiman, 2001) to fill gaps in from original GEBA dataset. A report on the gap filling process can be attained by e-mailing Trude Storelvmo (truds@uio.no).
DOI: 10.5281/zenodo.4382032
title: Gap filled GEBA data

description: Global (diffuse and direct) shortwave downwelling radiation at the surface between year 1961 and 2014. A total of ~1400 ground stations from GEBA archive has been selected and been through the machine learning technique "random forests" (Breiman, 2001) to fill gaps in from original GEBA dataset. A report on the gap filling process can be attained by e-mailing Trude Storelvmo (truds@uio.no).
DOI: 10.21227/n7m1-ft80
title: Roundabout_Junctions_Dataset

description: At the ground level, a map is a detailed and accurate two-dimensional representation of natural and human- made features of the linear objects. These object can be in the form of a circle, rectangle or any combination of geometrical shapes. For domain analysis, attributes are used by merging the geometry and the real map. These attributes are defined by the practical study of the raw map data. One of the practical problems of maps related to the identification of junctions in a roundabout has been considered. This paper identifies the junctions in a roundabout, where the junctions can be entry or exit nodes, which refer to the point where the road enters into the roundabout or the point where the road exits from it. In this paper, this problem has been solved by using domain knowledge over real map data. Data from closed loops has been extracted which, in reality, are either roundabouts or not. On this data, multiple machine learning models have been implemented and domain analysis has been performed over the direction of travel that defines the traffic direction, which can be ‘BOTH’, ‘TO’ or ‘FROM’. Through this, it was possible to improvise the accuracy to 81 percent.
DOI: 10.21227/kfm8-2892
title: Roundabout_Junctions_Dataset

description: At the ground level, a map is a detailed and accurate two-dimensional representation of natural and human- made features of the linear objects. These object can be in the form of a circle, rectangle or any combination of geometrical shapes. For domain analysis, attributes are used by merging the geometry and the real map. These attributes are defined by the practical study of the raw map data. One of the practical problems of maps related to the identification of junctions in a roundabout has been considered. This paper identifies the junctions in a roundabout, where the junctions can be entry or exit nodes, which refer to the point where the road enters into the roundabout or the point where the road exits from it. In this paper, this problem has been solved by using domain knowledge over real map data. Data from closed loops has been extracted which, in reality, are either roundabouts or not. On this data, multiple machine learning models have been implemented and domain analysis has been performed over the direction of travel that defines the traffic direction, which can be ‘BOTH’, ‘TO’ or ‘FROM’. Through this, it was possible to improvise the accuracy to 81 percent.
DOI: 10.6084/m9.figshare.13292108.v2
title: Table S1: Huntington Park Medical Clinics: Reasons for Declining Recruitment

description: Supplementary table (Table S1) demonstrating reasons medical clinics declined to participate in the study entitled, "Availability of Mental Health- and PCOS-Related Information for Women of Color in a Low-Income Urban Community," by Mayra Zamora and Melanie Sabado-Liwag.
DOI: 10.5285/b1bd715112ca43ab948226d11d72b85e
title: ESA Fire Climate Change Initiative (Fire_cci): AVHRR-LTDR Burned Area Pixel product, version 1.1

description: The ESA Fire Disturbance Climate Change Initiative (CCI) project has produced maps of global burned area derived from satellite observations. The AVHRR - LTDR Pixel v1.1 product described here contains gridded data of global burned area derived from spectral information from the AVHRR (Advanced Very High Resolution Radiometer) Land Long Term Data Record (LTDR) v5 dataset produced by NASA. The dataset provides monthly information on global burned area at 0.05-degree spatial resolution (the resolution of the AVHRR-LTDR input data) from 1982 to 2018. The year 1994 is omitted as there was not enough input data for this year. The dataset is distributed in monthly GeoTIFF files, packed in annual tar.gz files, and it includes 5 files: date of BA detection (labelled JD), confidence label (CL), burned area in each pixel (BA), number of observations in the month (OB) and a metadata file. For further information on the product and its format see the Product User Guide.
DOI: 10.7483/opendata.v439.nxzc
title: /AllPhysics2760/Run2011A-16Jul2011-v1/RECO
DOI: 10.7483/opendata.pbqn.wk8m
title: /AllPhysics2760/Nov2011_HI-SD_JetHI-276TeV_ppRereco/RECO
DOI: 10.7483/opendata.9nkf.q7em
title: /AllPhysics2760/Nov2011_HI-SD_MuHI-276TeV_ppRereco/RECO
DOI: 10.7483/opendata.91do.0dev
title: /AllPhysics2760/Nov2011_HI-SD_PhotonHI-276TeV_ppRereco/RECO
DOI: 10.7483/opendata.cdqv.g77r
title: /MinBias0Tesla0/Run2011A-PromptReco-v5/RECO
DOI: 10.7483/opendata.6cn1.uhg5
title: /MinBias0Tesla1/Run2011A-PromptReco-v5/RECO
DOI: 10.7483/opendata.4qc8.x4ej
title: /MinBias0Tesla2/Run2011A-PromptReco-v5/RECO
DOI: 10.7483/opendata.9s5f.by3b
title: /HICorePhysics/HIRun2010-PromptReco-v3/RECO
DOI: 10.6073/pasta/0ca8ddfcad0a88009b11fe8aca21ae8d
title: Limnological data from nearly 400 lakes across the Americas and New Zealand with a focus on vertical profiles of temperature, UV radiation, and optical properties

description: Two and a half decades of limnological data have been collected from nearly 400 lakes, encompassing a wide range of systems and a broad range of geography. This data set comprises one of the largest and most complete sets of measurements of underwater ultraviolet (UV) transparency available in the world. The data include a suite of 36 variables, with a focus on the optical characteristics. Lakes range from pristine natural lakes to manmade reservoirs. The systems represented in this data set are largely located in North America, from the northeastern United States to Alaska, and alpine and subalpine lakes in the Rocky Mountains of the United States and Canada. Lakes included range from iconic Lake Tahoe, and Castle Lake in northern California, to lakes in the South American Patagonian region, as well as New Zealand. Data were most often collected during the summer, and in some lakes span multiple years (with year-round data since 2006 in Lake Tahoe). The data here are contained in three files, including LakeData.csv, SiteInformation.csv, and Methods.csv. The main data are in LakeData.csv. SiteInformation.csv and Methods.csv support the main data file with descriptions of the sampling sites and methods by which samples were processed, respectively. This data set complements the site-intensive limnological data that we published in EDI on 30+ years of data from 3 lakes in the Poconos Mountains region of Pennsylvania, USA. This complementary data set can be accessed at https://portal.edirepository.org/nis/mapbrowse?scope=edi&identifier=186
DOI: 10.7483/opendata.305g.poec
title: /HIAllPhysics/HIRun2010-ZS-v2/RECO
DOI: 10.7483/opendata.3xx5.frzs
title: /HIDiMuon/HIRun2011-04Mar2013-v1/RECO
DOI: 10.7483/opendata.m2xv.k3b0
title: /HIHighPt/HIRun2011-15Apr2013-v1/RECO
DOI: 10.7483/opendata.u18s.lssa
title: /HIMinBiasUPC/HIRun2011-12Jun2013-v1/RECO
DOI: 10.7483/opendata.fu6d.x36j
title: /MinimumBias/HIRun2011-PromptReco-v1/RECO
DOI: 10.7483/opendata.xzlp.hqyg
title: /ForwardTriggers/HIRun2011-PromptReco-v1/RECO
DOI: 10.5517/ccdc.csd.cc26kl9p
title: CCDC 2042692: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klbq
title: CCDC 2042693: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klcr
title: CCDC 2042694: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klds
title: CCDC 2042695: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klft
title: CCDC 2042696: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klgv
title: CCDC 2042697: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klhw
title: CCDC 2042698: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26kljx
title: CCDC 2042699: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klky
title: CCDC 2042700: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26kllz
title: CCDC 2042701: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klm0
title: CCDC 2042702: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26kln1
title: CCDC 2042703: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klp2
title: CCDC 2042704: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klq3
title: CCDC 2042705: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klr4
title: CCDC 2042706: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26kls5
title: CCDC 2042707: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klt6
title: CCDC 2042708: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klv7
title: CCDC 2042709: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klw8
title: CCDC 2042710: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klx9
title: CCDC 2042711: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klyb
title: CCDC 2042712: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26klzc
title: CCDC 2042713: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.5517/ccdc.csd.cc26km0f
title: CCDC 2042714: Experimental Crystal Structure Determination

description: Related Article: M.L. Chodkiewicz, M. Woińska, K. Woźniak|2020|IUCrJ|7|1199|doi:10.1107/S2052252520013603
DOI: 10.6084/m9.figshare.13469180.v1
title: Mathematica Scripts from Absence of diagonal force constants in cubic Coulomb crystals

description: Mathematica scripts used to generate the data.
DOI: 10.6084/m9.figshare.13469180
title: Mathematica Scripts from Absence of diagonal force constants in cubic Coulomb crystals

description: Mathematica scripts used to generate the data.
DOI: 10.14284/440
title: Carbon stable isotope data of essential amino acids of predator and consumer reef fish species across North Malé Atoll, Maldives

description: This dataset contains carbon isotope values of essential amino acids measured from white muscle tissue of coral reef fish predator and consumer species. These reef fish were sampled across inner lagoonal and outer reef slope habitats of North Male Atoll, Maldives. The five essential amino acids measured are Leucine, Lysine, Phenylalanine, Threonine, and Valine.
description: Samples were collected between January and March 2017 and during December 2018.
DOI: 10.25403/upresearchdata.13318172
title: Explaining entrepreneurial intent among working professionals in the private sector of Zimbabwe

description: Data collected on Entrepreneurial Intentions. The datasets includes survey responses from the sample group tabulated into an excel document. The data mainly contains responses on 5-point likert scale from strongly disagree to strongly agree. This was a quantitative study from a sample group of 58 respondents.<br>
DOI: 10.25403/upresearchdata.13318172.v1
title: Explaining entrepreneurial intent among working professionals in the private sector of Zimbabwe

description: Data collected on Entrepreneurial Intentions. The datasets includes survey responses from the sample group tabulated into an excel document. The data mainly contains responses on 5-point likert scale from strongly disagree to strongly agree. This was a quantitative study from a sample group of 58 respondents.<br>
DOI: 10.17894/ucph.14d05236-9749-42ad-9550-d2ae34f155e0
title: Data for the manuscript Coherent Spin-Photon Interface with Waveguide Induced Cycling Transitions