cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.833912.v2
title: Mock Metagenomic Dataset, Read 1, full set

description: 40 M paired end reads were constructed from 25 reference microbial genomes (including associated plasmids). The reads were either left as paired ends or merged to form longer, continuous reads. The full datasets (either paired or merged) were digitally normalized. They are provided for the purpose of benchmarking assemblers, testing annotation procedures, etc. See table for details on full dataset.
DOI: 10.6084/m9.figshare.833906
title: SG hybrid trace of LU class B with 32 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833912.v1
title: Mock Metagenomic Dataset, Read 2, full set

description: 40 M paired end reads were constructed from 25 reference microbial genomes (including associated plasmids). The reads were either left as paired ends or merged to form longer, continuous reads. The full datasets (either paired or merged) were digitally normalized. They are provided for the purpose of benchmarking assemblers, testing annotation procedures, etc. See table for details on full dataset.
DOI: 10.6084/m9.figshare.833904
title: SG hybrid trace of LU class C with 8 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833905
title: SG hybrid trace of LU class C with 16 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833902
title: SG hybrid trace of LU class B with 8 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833904.v1
title: SG hybrid trace of LU class C with 8 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833901
title: SG hybrid trace of DT class B with 43 processors for Graphene

description: This is a SimGrid trace of the NASPB DT benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833902.v1
title: SG hybrid trace of LU class B with 8 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833903
title: SG hybrid trace of LU class B with 16 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833900
title: SG hybrid trace of DT class C with 85 processors for Graphene

description: This is a SimGrid trace of the NASPB DT benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833901.v1
title: SG hybrid trace of DT class B with 43 processors for Graphene

description: This is a SimGrid trace of the NASPB DT benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833903.v1
title: SG hybrid trace of LU class B with 16 processors for Graphene

description: This is a SimGrid trace of the NASPB LU benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833892
title: SG hybrid trace of CG class C with 128 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833899
title: SG hybrid trace of DT class A with 21 processors for Graphene

description: This is a SimGrid trace of the NASPB DT benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833899.v1
title: SG hybrid trace of DT class A with 21 processors for Graphene

description: This is a SimGrid trace of the NASPB DT benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833891
title: SG hybrid trace of CG class B with 128 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833889
title: SG hybrid trace of CG class C with 64 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833890
title: SG hybrid trace of CG class B with 64 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833892.v1
title: SG hybrid trace of CG class C with 128 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833886
title: SG hybrid trace of CG class C with 8 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833887
title: SG hybrid trace of CG class C with 16 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833888
title: SG hybrid trace of CG class C with 32 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833883
title: SG hybrid trace of CG class B with 8 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833884
title: SG hybrid trace of CG class B with 16 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833885
title: SG hybrid trace of CG class B with 32 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833880
title: Tau trace of LU class C with 128 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833885.v1
title: SG hybrid trace of CG class B with 32 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833881
title: Tau trace of LU class C with 128 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833884.v1
title: SG hybrid trace of CG class B with 16 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833879
title: Tau trace of LU class C with 128 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833876
title: Tau trace of LU class C with 64 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833877
title: Tau trace of LU class C with 64 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833878
title: Tau trace of LU class C with 128 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833875
title: Tau trace of LU class B with 64 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833886.v1
title: SG hybrid trace of SG class C with 8 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.6084/m9.figshare.833874
title: Tau trace of LU class B with 128 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833878.v2
title: Tau trace of LU class C with 128 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833873
title: Tau trace of LU class B with 128 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833873.v1
title: Tau trace of LU class B with 128 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833875.v1
title: Tau trace of LU class B with 64 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833876.v1
title: Tau trace of LU class C with 64 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833867
title: Tau trace of LU class C with 32 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833872
title: Tau trace of LU class B with 128 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833878.v1
title: Tau trace of LU calss C with 128 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833865
title: Tau trace of LU class B with 32 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833866
title: Tau trace of LU class C with 16 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833872.v1
title: Tau trace of LU class B with 128 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833874.v2
title: Tau trace of LU class B with 128 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.6084/m9.figshare.833864
title: Tau trace of LU class C with 8 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833867.v2
title: Tau trace of LU class C with 32 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833874.v1
title: Tau trace of LU class B with 64 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833865.v1
title: Tau trace of LU class B with 32 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833866.v1
title: Tau trace of LU class C with 16 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833861
title: Tau trace of DT class C with 448 processors on Graphene

description: This is a Tau trace of the NASPB DT Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833862
title: Tau trace of LU class B with 8 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833863
title: Tau trace of LU class B with 16 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833867.v1
title: Tau trace of LU

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833861.v1
title: Tau trace of DT class C with 448 processors on Graphene

description: This is a Tau trace of the NASPB DT Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833862.v1
title: Tau trace of LU class B with 8 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833863.v1
title: Tau trace of LU class B with 16 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833864.v1
title: Tau trace of LU class C with 8 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833858
title: Tau trace of DT class A with 21 processors on Graphene

description: This is a Tau trace of the NASPB DT Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833859
title: Tau trace of DT class B with 43 processors on Graphene

description: This is a Tau trace of the NASPB DT Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833860
title: Tau trace of DT class C with 85 processors on Graphene

description: This is a Tau trace of the NASPB DT Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833856
title: Tau trace of CG class C with 64 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833857
title: Tau trace of CG class C with 128 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833858.v1
title: Tau trace of DT class A with 21 processors on Graphene

description: This is a Tau trace of the NASPB DT Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833859.v1
title: Tau trace of DT class B with 43 processors on Graphene

description: This is a Tau trace of the NASPB DT Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833860.v1
title: Tau trace of DT class C with 85 processors on Graphene

description: This is a Tau trace of the NASPB DT Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833853
title: Tau trace of CG class C with 8 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833854
title: Tau trace of CG class C with 16 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833855
title: Tau trace of CG class C with 32 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833855.v1
title: Tau trace of CG class C with 32 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833853.v1
title: Tau trace of CG class C with 8 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833854.v1
title: Tau trace of CG class C with 16 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833849
title: Tau trace of CG class B with 64 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833850
title: Tau trace of CG class B with 128 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833851
title: Companion of the PMBS article on modeling of MPI applications with SimGrid

description: These are the tau traces of the NASPB. They were obtained by Georges Markomanolis on the Graphene cluster. Some of the files were too large to be uploaded on figshare so I had to split them. This fileset also comprises the org source of the article we submitted to PMBS'13 (http://pmbsworkshop.org/). This org document comprises (hopefully) all the scripts we used to conduct our analysis and generate the plots. There is also a pdf, which is a preprint of the article we submitted.
DOI: 10.6084/m9.figshare.833857.v1
title: Tau trace of CG class C with 64 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833849.v1
title: Tau trace of CG class B with 64 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833850.v1
title: Tau trace of CG class B with 128 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833847
title: Tau trace of CG class B with 16 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833848
title: Tau trace of CG class B with 32 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833839
title: Gaussian Job Archive for C15H18ClNO3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.833846
title: Tau trace of CG class B with 8 processors on Graphene

description: This is a Tau trace of the NASPB CG Benchmark obtained by Georges Markomanolis on the Graphene cluster.
DOI: 10.6084/m9.figshare.833832
title: Open Access MegaJournals - UBC Open Event

description: This is the powerpoint of a Presentation to UBC Open on 10/22/2013 (see the livestreamed video at: http://mediasitemob1.mediagroup.ubc.ca/Mediasite/Play/2cdc95b2d56a4c56a6606a6c116a58b01d). A blog post for Creative Commons New Zealand was based on this ppt (see http://creativecommons.org.nz/2013/10/open-access-megajournals-have-they-changed-everything/). View the PPT with synced audio at: http://www.slideshare.net/PBinfield/oa-mega-journals-ubc-open-event Blurb for the talk: The Open Access ‘Megajournal’ (a class of journal defined by the success of PLOS ONE) is a reasonably recent phenomenon, but one that some observers believe is poised to change the publishing world very rapidly. A megajournal is typically understood to be an online-only journal; covering a very broad subject area; selecting content based only on scientific and methodological soundness; and with a business model which allows each article to cover its own costs. With these attributes, megajournals are not limited in potential output and as such are able to grow commensurate with any growth in submissions. PLOS ONE pioneered this category of journal and is currently expected to publish in excess of 30,000 articles in 2013 alone – possibly approaching 3% of all STM articles published that year. Recognizing the success of this model, many other publishers (such as Nature, Springer, SAGE, BioONE, PeerJ, , BMJ, F1000 and so on) have launched similar journals and each of these publishers is seeing their megajournal grow in volume, month on month. In many ways, the growth of the megajournal has been one of the most visible successes of the open access movement.