cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.f74c96
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Ixobrychus exilis)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043689-250717081556266/datasets/export for details.
DOI: 10.15468/dl.2c2cks
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solidago canadensis",
 "Country is Türkiye",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043687-250717081556266/datasets/export for details.
DOI: 10.15468/dl.na4tqx
title: Occurrence Download

description: A dataset containing 25798 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Ixobrychus exilis)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 25798 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043690-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29093678
title: Mechanistic prediction of community composition across resource conditions and species richness

description: This is the code and data for the study entitiled 'Mechanistic prediction of community composition across resource conditions and species richness'. The old title is 'The mechanistic rules for species coexistence'. Please read the readme file first.
DOI: 10.6084/m9.figshare.29093678.v4
title: Mechanistic prediction of community composition across resource conditions and species richness

description: This is the code and data for the study entitiled 'Mechanistic prediction of community composition across resource conditions and species richness'. The old title is 'The mechanistic rules for species coexistence'. Please read the readme file first.
DOI: 10.15468/dl.5gj9kd
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Korea, Republic of",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hemerocallis hongdoensis"
 ]
}

 The dataset includes 65 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043691-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29093678.v3
title: The mechanistic rules for species coexistence

description: This is the code and data for the study entitiled 'The mechanistic rules for species coexistence'. Please read the readme file first.
DOI: 10.15468/dl.y3yucv
title: Occurrence Download

description: A dataset containing 1086431 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Alopochen aegyptiaca)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 1086431 records from 518 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043644-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7tgb2m
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Corydoras julii)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 70 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043692-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dmk75y
title: Occurrence Download

description: A dataset containing 1545 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mayotte",
 "OccurrenceStatus is Present",
 "TaxonKey is Squamata"
 ]
}

 The dataset includes 1545 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043694-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f8nrw6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Maeotias inexspectata",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043696-250717081556266/datasets/export for details.
DOI: 10.15468/dl.qbm523
title: Occurrence Download

description: A dataset containing 5741 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solidago canadensis",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5741 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043695-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sbc9sn
title: Occurrence Download

description: A dataset containing 178 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Korea, Republic of",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Anemone koraiensis"
 ]
}

 The dataset includes 178 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043698-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c68xwr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Ixobrychus exilis)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043697-250717081556266/datasets/export for details.
DOI: 10.5281/zenodo.16417485
title: Supplementary data for paper "Anthropozoonotic spillovers reveal sustained long-term cryptic circulation of SARS-CoV-2 within and between Lithuanian mink farms"

description: This supplementary data includes BEAST output files, analysis code, and a limited sample metadata.

The zipped folder "Beast_data" contains all files related to BEAST analyses.The subfolder "Log_and_history_trees_files" holds the raw BEAST output, including both used and discarded runs. The subfolder "Log_Combiner_output" contains post-burn-in combined files generated using LogCombiner v1.10.4. The subfolder "MCC_Trees" contains maximum clade credibility (MCC) trees created with TreeAnnotator v1.10.4 from post-burn-in history files. The subfolder "XML_files_no_alignment" contains XML files generated using BEAUti; sequence alignments have been removed from these files to comply with GISAID data-sharing policies.

The folder "Code_and_metadata" contains code and additional data used in figure generation. The folders are named according to the image it was used to generate.

A file titled Sample_table_with_EPI_ISL.csv provides the associated GISAID accession numbers. In some cases, exact matches were not possible as we have realinged the sequences and ended up with different consesus sequences, in such cases GISAID reference is added to "EPI_ISL_Sample_only" column. Also there are some mismathes due to the mislabeling of collection date during GISAID uploads. Some sequences are not available in GISAID.

Contains file for GISAID aknowledgement, named "GISAID_acknowledgement_of_data_contributors.pdf"

Contains a .fasta file with SARS-CoV-2 sequences originating from mink, realigned in our laboratory.
DOI: 10.15468/dl.mnbvwu
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amaranthus hybridus",
 "Country is Slovakia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043701-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fsd6pb
title: Occurrence Download

description: A dataset containing 1137 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chinese Taipei",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Monachosorum henryi"
 ]
}

 The dataset includes 1137 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043699-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s6jumn
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Ixobrychus exilis)",
 "Country is one of (Algeria, Angola, Benin, Botswana, British Indian Ocean Territory, Burkina Faso, Burundi, Cabo Verde, Cameroon, Central African Republic, Chad, Comoros, Congo, Congo, Democratic Republic of the, Côte d’Ivoire, Djibouti, Egypt, Equatorial Guinea, Eritrea, Eswatini, Ethiopia, French Southern Territories, Gabon, Gambia, Ghana, Guinea, Guinea-Bissau, Kenya, Lesotho, Liberia, Libya, Madagascar, Malawi, Mali, Mauritania, Mauritius, Mayotte, Morocco, Mozambique, Namibia, Niger, Nigeria, Réunion, Rwanda, Saint Helena, Ascension and Tristan da Cunha, Sao Tome and Principe, Senegal, Seychelles, Sierra Leone, Somalia, South Africa, South Sudan, Sudan, Tanzania, United Republic of, Togo, Tunisia, Uganda, Western Sahara, Zambia, Zimbabwe)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043700-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wxb43c
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solanum elaeagnifolium",
 "Country is North Macedonia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043704-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4nttzs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Poropuntius kontumensis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043706-250717081556266/datasets/export for details.
DOI: 10.15468/dl.e9saa6
title: Occurrence Download

description: A dataset containing 253 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solanum elaeagnifolium",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 253 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043705-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9ecu8f
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solanum elaeagnifolium",
 "Country is Tunisia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 54 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043707-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29605745.v1
title: EVIP: An eye video-based intraocular pressure dataset for non-contact intraocular pressure measurement

description: Existing facial rPPG datasets (e.g., for heart rate or oxygen saturation monitoring) primarily capture full-face regions, focusing on skin perfusion signals from the forehead, cheeks, or periorbital areas. These datasets lack specialized annotations for ocular structures (pupil, iris, sclera) and direct IOP measurements, as their core goal is general physiological parameter estimation rather than eye-specific pressure analysis. In contrast, EVIP is uniquely designed to link ocular physiological signals with IOP values: it provides high-resolution eye-region videos (isolating pupil-iris complexes) paired with clinically validated IOP measurements, enabling the extraction of IOP-related BVP features from eye regions.The folder contains two subfolders, EVIP-1 and EVIP-2, representing the two versions of the EVIP dataset. Each subfolder contains eye videos recorded in MP4 format, along with data files containing the actual IOP values recorded and stored in CSV file. For the EVIP-1 folder, there were 60 eye videos from 30 participants, named in Arabic numeral order, along with an “EVIP-1.CSV” data file. The data included a column named “Actual Value” containing the actual IOP records, which corresponded to the order of the video files from top to bottom. EVIP-2 was stored in the same manner, containing 122 eye videos from 60 participants, along with a synchronously recorded actual IOP value data file named “EVIP-2.CSV”.
DOI: 10.6084/m9.figshare.29605745
title: EVIP: An eye video-based intraocular pressure dataset for non-contact intraocular pressure measurement

description: Existing facial rPPG datasets (e.g., for heart rate or oxygen saturation monitoring) primarily capture full-face regions, focusing on skin perfusion signals from the forehead, cheeks, or periorbital areas. These datasets lack specialized annotations for ocular structures (pupil, iris, sclera) and direct IOP measurements, as their core goal is general physiological parameter estimation rather than eye-specific pressure analysis. In contrast, EVIP is uniquely designed to link ocular physiological signals with IOP values: it provides high-resolution eye-region videos (isolating pupil-iris complexes) paired with clinically validated IOP measurements, enabling the extraction of IOP-related BVP features from eye regions.The folder contains two subfolders, EVIP-1 and EVIP-2, representing the two versions of the EVIP dataset. Each subfolder contains eye videos recorded in MP4 format, along with data files containing the actual IOP values recorded and stored in CSV file. For the EVIP-1 folder, there were 60 eye videos from 30 participants, named in Arabic numeral order, along with an “EVIP-1.CSV” data file. The data included a column named “Actual Value” containing the actual IOP records, which corresponded to the order of the video files from top to bottom. EVIP-2 was stored in the same manner, containing 122 eye videos from 60 participants, along with a synchronously recorded actual IOP value data file named “EVIP-2.CSV”.
DOI: 10.6084/m9.figshare.29605745.v2
title: EVIP: An eye video-based intraocular pressure dataset for non-contact intraocular pressure measurement

description: Existing facial rPPG datasets (e.g., for heart rate or oxygen saturation monitoring) primarily capture full-face regions, focusing on skin perfusion signals from the forehead, cheeks, or periorbital areas. These datasets lack specialized annotations for ocular structures (pupil, iris, sclera) and direct IOP measurements, as their core goal is general physiological parameter estimation rather than eye-specific pressure analysis. In contrast, EVIP is uniquely designed to link ocular physiological signals with IOP values: it provides high-resolution eye-region videos (isolating pupil-iris complexes) paired with clinically validated IOP measurements, enabling the extraction of IOP-related BVP features from eye regions.The folder contains two subfolders, EVIP-1 and EVIP-2, representing the two versions of the EVIP dataset. Each subfolder contains eye videos recorded in MP4 format, along with data files containing the actual IOP values recorded and stored in CSV file. For the EVIP-1 folder, there were 60 eye videos from 30 participants, named in Arabic numeral order, along with an “EVIP-1.CSV” data file. The data included a column named “Actual Value” containing the actual IOP records, which corresponded to the order of the video files from top to bottom. EVIP-2 was stored in the same manner, containing 122 eye videos from 60 participants, along with a synchronously recorded actual IOP value data file named “EVIP-2.CSV”.
DOI: 10.6084/m9.figshare.29605745.v3
title: EVIP: An eye video-based intraocular pressure dataset for non-contact intraocular pressure measurement

description: Existing facial rPPG datasets (e.g., for heart rate or oxygen saturation monitoring) primarily capture full-face regions, focusing on skin perfusion signals from the forehead, cheeks, or periorbital areas. These datasets lack specialized annotations for ocular structures (pupil, iris, sclera) and direct IOP measurements, as their core goal is general physiological parameter estimation rather than eye-specific pressure analysis. In contrast, EVIP is uniquely designed to link ocular physiological signals with IOP values: it provides high-resolution eye-region videos (isolating pupil-iris complexes) paired with clinically validated IOP measurements, enabling the extraction of IOP-related BVP features from eye regions.The folder contains two subfolders, EVIP-1 and EVIP-2, representing the two versions of the EVIP dataset. Each subfolder contains eye videos recorded in MP4 format, along with data files containing the actual IOP values recorded and stored in CSV file. For the EVIP-1 folder, there were 60 eye videos from 30 participants, named in Arabic numeral order, along with an “EVIP-1.CSV” data file. The data included a column named “Actual Value” containing the actual IOP records, which corresponded to the order of the video files from top to bottom. EVIP-2 was stored in the same manner, containing 122 eye videos from 60 participants, along with a synchronously recorded actual IOP value data file named “EVIP-2.CSV”.
DOI: 10.15468/dl.3vsp7d
title: Occurrence Download

description: A dataset containing 93 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amaurornis marginalis)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 93 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043710-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9mfrpx
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((10.35616 47.3773,10.47405 47.3773,10.47405 47.48574,10.35616 47.48574,10.35616 47.3773))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Picidae"
 ]
}

 The dataset includes 37 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043708-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qrf2mm
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Drymonema dalmatinum",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043711-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8jf3dt
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amaranthus hybridus",
 "Country is Slovenia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043709-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.