Question: How to get the statistics of all the available bacterial genomes that were sequenced. I need a list of bacterial genomes sequenced from India.

Can anyone help me out with this issue.

Thanks

Answer: This is one answer. It is likely not complete/comprehensive but should provide a start. I will leave it to you yo get the actual list of genomes from the file below.

Download prokaryotic genomes report file [from NCBI here][1].

You can look at the `Center` field in that file to get a summary of places submitting these genomes.
Note: There is some redundancy because of lower/upper case letters, style of address.

$ awk -F '\t' '{print $17}' prokaryotes.txt | sort | uniq -c | wc -l
6096

These are the Indian institutes along with the number of genomes attributed to them.

219 Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India
1 Central India Institute of Medical Sciences
2 CSIR - Indian Institute of Toxicology Research
1 CSIR-Indian Institute of Toxicology Research
2 CSIR-North East Institute of Science and Technology, Jorhat-785006, Assam,India
1 Department of Fisheries Microbiology, Karnataka Veterinary, Animal and Fisheries Sciences University, College of Fisheries, Kankanady, Mangalore, Karnataka 575002, India
1 Department of Life Sciences, Mumbai University, Mumbai, India
1 Department of Plant Sciences, School of Life Sciences, Central University P.O., University of Hyderabad, Hyderabad 500046, India
4 Department of Veterinary Microbiology, College of Veterinary Science and Animal Husbandry, Anand Agricultural University, Anand, Gujarat, India
17 Directorate of Groundnut Research (Indian Council of Agricultural Research)
6 Dr. G.M. Taori, Central India Institute of Medical Sciences
1 Eurofins Genomics India Pvt ltd
1 Eurofins Genomics India Pvt Ltd.
2 ICAR-Indian Agricultural Research Institute, New Delhi
2 ICAR-Indian Grassland and Fodder Research Institute
2 Indian Agricultural Research Institute
3 Indian Agricultural Research Institute, New Delhi
1 Indian Institute of Chemical Biology
11 Indian Institute Of Chemical biology
1 Indian Institute of Horticultural Research
6 Indian Institute of Science
3 Indian Institute of Science Education and Research, Bhopal
1 Indian Institute of Technology
1 Indian Institute of Technology Bombay
1 Indian Institute of Technology, Bombay
1 Indian Institute of Technology Delhi
2 Indian Institute of Technology Kanpur
6 Indian Institute of Technology Kharagpur
1 Indian Institute of Technology Mandi
1 Indian Institute of Technology, Mandi, HP, India
1 Indian Oil Corporation Lmt, Faridabad
1 Institute of Microbial Technology (CSIR), Chandigarh, India
1 Institute of Microbial Technology (CSIR), Sector 39A, Chandigarh-160036, India
1 Institute of Microbial Technology(IMTECH), Chandigarh, India
2 Institute of Microbial Technology(IMTECH),Chandigarh,India
10 Institute of Microbial Technology (IMTECH), Chandigarh, India 160036
1 International Centre for Genetic Engineering and Biotechnology, New Delhi, India
1 JNT University Hyderabad, India
1 MACS Agharkar Research Institute, Pune (MS) India
4 National Centre for Cell Science, Pune - 411007, India
2 National Institute of Tuberculosis Research, Chennai, India
1 School of Environmental Studies, Jadavpur University, Kolkata 700032, India
6 Serum Institute of India
1 University of Hyderabad, India
2 Yenepoya University, Mangalore, India
[1]: ftp://ftp.ncbi.nlm.nih.gov/genomes/GENOME_REPORTS/prokaryotes.txt