bluuebunny/crossref_metadata_2025_split huggingface dataset:
Improving young pig welfare on-farm: The Five Domains Model
Authors: Johnson Anna K , Rault Jean-Loup , Marchant Jeremy N , Baxter Emma M , O’Driscoll Keelin 
Published: May 2022

AbstractConsidering welfare through the “neonatal and nursery pig perspective” is an exciting approach and one that resonates with consumers. Overlaying this with the Five Domains Model, as we suggest in this review, points to practical on-farm improvements that provide each pig the opportunity to experience positive mental states. The Five Domains Model is broken into physical and functional states, which include Domain 1: Nutrition, Domain 2: Physical Environment, Domain 3: Health, and Domain 4: Behavioral Interaction, and Domain 5: Mental State. The Five Domains Model can build on the breadth and depth of swine welfare science to highlight opportunities to improve welfare on-farm. In Domain 1, management of increasingly large litters is considered, with examples of sow vs. artificial rearing, colostrum quality and quantity, and creep feed management strategies. Efforts can result in positive mental states such as feeling full and content and the ability to experience the pleasure of drinking and food tastes and smells. Domain 2 considers space complexity and access to key resources, along with thermal and physical amenities, to promote feelings of physical comfort. Domain 3 considers pig health in three broads, yet inter-linking categories 1) congenital and hereditary health, 2) environmental pathogen load, and 3) colostrum quality and quantity, and its effect on the microbiome. Improvements can result in a pig that displays vitality and feels healthy. Domain 4 provides the pig opportunities to express its rich behavioral repertoire, specifically positive social interactions, play, and exploration. These efforts can result in pigs feeling calm, safe, comfortable, having companionship, engaged, interested, and rewarded. In conclusion, using the Five Domains Model can highlight numerous opportunities to improve current and future housing and management through the “neonatal and nursery pig perspective” with a focus on inducing positive mental states that can result in improved quality of life and welfare state.
There and Back Again: Bleed from Extraordinary Experiences
Authors: Orazi Davide C , van Laer Tom 
Published: May 2022

Abstract
From reenactments to pilgrimages, extraordinary experiences engage consumers with frames and roles that govern their actions for the duration of the experience. Exploring such extraordinary frames and roles, however, can make the act of returning to everyday life more difficult, a process prior research leaves implicit. The present ethnography of live action role-playing explains how consumers return from extraordinary experiences and how this process differs depending on consumers’ subjectivity. The emic term “bleed” captures the trace that extraordinary frames and roles leave in everyday life. The subjective tension between the extraordinary and the ordinary intensifies bleed. Consumers returning from the same experience can thus suffer different bleed intensities, charting four trajectories of return that differ in their potential for transformation: absent, compensatory, cathartic, and delayed. These findings lead to a transformative recursive process model of bleed that offers new insights into whether, how, and why consumers return transformed from extraordinary experiences with broader implications for experiential consumption and marketing.
Giant focal nodular hyperplasia with a background of hepatic steatosis in a 14-year-old boy
Authors: Fleming Andrew M , Duffy Caitlyn , Gartrell Jessica , McCarville M Beth , Langham Max R , Ruiz Robert E , Santiago Teresa , Murphy Andrew J 
Published: May 2022

Abstract
Giant focal nodular hyperplasia (GFNH) is rarely seen in children, presenting complex diagnostic and management considerations. Pathognomonic radiographic findings can be absent in this population, and the nuances of pathologic examination are critical. We present a child with a GFNH involving the right side of the liver arising in the background of hepatic steatosis. The details of the diagnosis and therapeutic decisions involved in his treatment are discussed.
The Qɘltu Dialect of Al-Dōr
Authors: Hassan Qasim 
Published: May 2022

Abstract
The aim of this paper is to explore, for the first time, the qǝltu dialect spoken in the western part of the town of Al-Dor. Still to this day, this dialect remains very poorly studied and has generally been mentioned only in passing in the literature on Iraqi Arabic dialectology. The data used here are from a fieldwork trip to the town in 2018 where I was able to interview locals about their own dialect.
A WHIM origin for the soft excess emission in the Coma cluster
Authors: Bonamente Massimiliano , Mirakhor Mohammad , Lieu Richard , Walker Stephen 
Published: May 2022

ABSTRACT
This paper provides a new analysis of ROSAT observations of the Coma cluster, to determine the amount of soft X-ray radiation in excess of the contribution from the hot intracluster medium (ICM). The re-analysis is made possible by a high-resolution study of the hot ICM with the XMM–Newton and Planck telescopes out to the cluster’s virial radius. The analysis confirms the original findings of a strong excess of soft X-ray radiation, which is likely to be of thermal origin. We find quantitative agreement between the detected soft excess and the physical characteristics of warm–hot intergalactic medium (WHIM) filaments seen in hydrodynamical simulations. We conclude that the most plausible explanation for the soft excess is the presence of ∼10 Mpc long filaments at log T(K) ≃ 6, with a baryon overdensity of ∼300, converging towards the Coma cluster. This interpretation therefore provides support for the identification of the missing low-redshift baryons with WHIM filaments, as predicted by numerical simulations.
Collisional Charging in the Low Pressure Range of Protoplanetary Disks
Authors: Becker T , Steinpilz T , Teiser J , Wurm G 
Published: May 2022

Abstract
In recent years, collisional charging has been proposed to promote the growth of pebbles in early phases of planet formation. Ambient pressure in protoplanetary disks spans a wide range from below 10−9 mbar up to way beyond mbar. Yet, experiments on collisional charging of same material surfaces have only been conducted under Earth atmospheric pressure, Martian pressure and more generally down to 10−2 mbar thus far. This work presents first pressure dependent charge measurements of same material collisions between 10−8 and 103 mbar. Strong charging occurs down to the lowest pressure. In detail, our observations show a strong similarity to the pressure dependence of the breakdown voltage between two electrodes and we suggest that breakdown also determines the maximum charge on colliding grains in protoplanetary disks. We conclude that collisional charging can occur in all parts of protoplanetary disks relevant for planet formation.
Tidal dynamo in solar-like close binary stars
Authors: Wei Xing 
Published: May 2022

Abstract
Thermal convection is commonly believed to be the energy source of stellar or planetary dynamo. In this short paper we provide another possibility, namely large-scale tidal flow. In close binary stars, say, solar-like stars with orbital period at 2 or 3 days, large-scale tidal flow is comparable to or even stronger than convective flow, and it can induce magnetic dynamo action. Based on dynamo equation and tidal theory we estimate the magnetic energy induced by large-scale tidal flow, which is proportional to the cube of orbital frequency. Our estimation can be tested by the future spectropolarimetric observations and numerical simulations for close binary stars.
CATANA: an online modelling environment for proteins and nucleic acid nanostructures
Authors: Kuťák David , Melo Lucas , Schroeder Fabian , Jelic-Matošević Zoe , Mutter Natalie , Bertoša Branimir , Barišić Ivan 
Published: May 2022

Abstract
In the last decade, significant advances have been made towards the rational design of proteins, DNA, and other organic nanostructures. The emerging possibility to precisely engineer molecular structures resulted in a wide range of new applications in fields such as biotechnology or medicine. The complexity and size of the artificial molecular systems as well as the number of interactions are greatly increasing and are manifesting the need for computational design support. In addition, a new generation of AI-based structure prediction tools provides researchers with completely new possibilities to generate recombinant proteins and functionalized DNA nanostructures. In this study, we present Catana, a web-based modelling environment suited for proteins and DNA nanostructures. User-friendly features were developed to create and modify recombinant fusion proteins, predict protein structures based on the amino acid sequence, and manipulate DNA origami structures. Moreover, Catana was jointly developed with the novel Unified Nanotechnology Format (UNF). Therefore, it employs a state-of-the-art coarse-grained data model, that is compatible with other established and upcoming applications. A particular focus was put on an effortless data export to allow even inexperienced users to perform in silico evaluations of their designs by means of molecular dynamics simulations. Catana is freely available at http://catana.ait.ac.at/.
FUNAGE-Pro: comprehensive web server for gene set enrichment analysis of prokaryotes
Authors: de Jong Anne , Kuipers Oscar P , Kok Jan 
Published: May 2022

AbstractRecent advances in the field of high throughput (meta-)transcriptomics and proteomics call for easy and rapid methods enabling to explore not only single genes or proteins but also extended biological systems. Gene set enrichment analysis is commonly used to find relations in a set of genes and helps to uncover the biological meaning in results derived from high-throughput data. The basis for gene set enrichment analysis is a solid functional classification of genes. Here, we describe a comprehensive database containing multiple functional classifications of genes of all (&gt;55 000) publicly available complete bacterial genomes. In addition to the most common functional classes such as COG and GO, also KEGG, InterPro, PFAM, eggnog and operon classes are supported. As classification data for features is often not available, we offer fast annotation and classification of proteins in any newly sequenced bacterial genome. The web server FUNAGE-Pro enables fast functional analysis on single gene sets, multiple experiments, time series data, clusters, and gene network modules for any prokaryote species or strain. FUNAGE-Pro is freely available at http://funagepro.molgenrug.nl.
Schizophrenia Polygenic Risk and Experiences of Childhood Adversity: A Systematic Review and Meta-analysis
Authors: Woolway Grace E , Smart Sophie E , Lynham Amy J , Lloyd Jennifer L , Owen Michael J , Jones Ian R , Walters James T R , Legge Sophie E 
Published: May 2022

AbstractBackground and HypothesisSchizophrenia has been robustly associated with multiple genetic and environmental risk factors. Childhood adversity is one of the most widely replicated environmental risk factors for schizophrenia, but it is unclear if schizophrenia genetic risk alleles contribute to this association.Study DesignIn this systematic review and meta-analysis, we assessed the evidence for gene-environment correlation (genes influence likelihood of environmental exposure) between schizophrenia polygenic risk score (PRS) and reported childhood adversity. We also assessed the evidence for a gene-environment interaction (genes influence sensitivity to environmental exposure) in relation to the outcome of schizophrenia and/or psychosis. This study was registered on PROSPERO (CRD42020182812). Following PRISMA guidelines, a search for relevant literature was conducted using Cochrane, MEDLINE, PsycINFO, Web of Science, and Scopus databases until February 2022. All studies that examined the association between schizophrenia PRS and childhood adversity were included.Study ResultsSeventeen of 650 identified studies met the inclusion criteria and were assessed against the Newcastle-Ottawa Scale for quality. The meta-analysis found evidence for gene-environment correlation between schizophrenia PRS and childhood adversity (r = .02; 95% CI = 0.01, 0.03; P = .001), but the effect was small and therefore likely to explain only a small proportion of the association between childhood adversity and psychosis. The 4 studies that investigated a gene-environment interaction between schizophrenia PRS and childhood adversity in increasing risk of psychosis reported inconsistent results.ConclusionsThese findings suggest that a gene-environment correlation could explain a small proportion of the relationship between reported childhood adversity and psychosis.
Birth of the Mexican Problem: Oil in Mexico, U.S. Social Sciences, and Transnational Labor, 1917–1920
Authors: Maiorana Juliette 
Published: May 2022

Abstract
Birth of the Mexican Problem is a historian’s version of a postcolonial analysis. I use the narrative history and research materials of one of the earliest think tanks in U.S. history to show how and why Mexico was made legible to U.S. audiences. Not just a response to early twentieth-century Mexican migration, the so-called Mexican problem was also deeply tied to U.S. capitalists’ economic interests in Mexico. I argue for the centrality of ties between big business, academics, and government in constructing ideas about Mexico and Mexican transnational labor. The story begins with an oilman named Edward Doheny.
Traumatic Stress and Depression Risk Screening at an ACS Verified Trauma Center
Authors: Petrucci Christina M. , Villaseñor Sally , Brown Wendi G. , Peters Rosalind M. 
Published: May 2022

BACKGROUND:
Physiological trauma that requires admission to an emergency department may result in psychological distress. As many as 20%–40% of civilians who experience trauma develop traumatic stress disorders and depression postinjury. Yet, less than 10% of trauma centers implement screening for traumatic stress and depression risk.

OBJECTIVE:
This project aimed to develop, implement, and evaluate a traumatic stress and depression risk screening policy.

METHODS:
Twelve trauma advanced practice providers implemented the newly developed traumatic stress and depression risk screening policy at an American College of Surgeons verified Level II trauma center. Trauma patients admitted for greater than 24 hr, 14 years of age or older, with a Glasgow Coma Scale score greater than 13 were eligible for screening using the Injured Trauma Survivor Screen.

RESULTS:
During the 6-week data collection period, 114 trauma patients presented to the emergency department. Of those, 82 (72%) met inclusion criteria, 77 (94%) eligible trauma patients were screened, and seven (9%) patients screened positive. Patients not eligible for screening were discharged within 24 hr or were too confused to answer questions. An evaluation survey revealed that the advanced practice providers thought that the screening policy was easy to use, feasible, not very time-consuming, and should be continued in the future.

CONCLUSION:
This project demonstrated the ease and effectiveness of implementing a traumatic stress and depression risk screening policy and that only minor changes are needed to make it sustainable.
Implementation of a Novel Home Visiting Nurse Pilot Program for Victims of Violent Penetrating Injury
Authors: Pino Elizabeth C. , Fontin Francesca , Dugan Elizabeth 
Published: May 2022

BACKGROUND:
Survivors of violent injuries are at risk for readmission, rehospitalization, and reinjury. In 2017, a novel home visiting nurse pilot program was implemented within a hospital-based violence intervention program (HVIP) to address disparities in care and combat the limited health care literacy and access, and the general mistrust of health care institutions among much of this population.

OBJECTIVE:
The purpose of this study was to review the design and implementation of the home visiting nurse component of the HVIP and to report the demographics, clinical characteristics, home care needs, and short-term health outcomes of the pilot sample.

METHODS:
This retrospective study was performed using a cohort of patients presenting to the emergency department at an urban, Level I trauma center for a violent penetrating injury between 2017 and 2018. The χ2 and Wilcoxon rank sum tests were used to compare patient demographics and injury characteristics. Cox proportional hazards regression models were used to estimate health outcomes.

RESULTS:
Of the 742 victims of violence included in this analysis, the 57 patients enrolled in the home visiting nurse pilot program were more likely to have severe gunshot wounds (68.4% vs. 40.3%, p < .001) requiring hospitalization (80.7% vs. 53.3%, p < .001), with 3.5% requiring rehospitalization within 90 days. The primary interventions provided by the home visiting nurse involved medical navigation and education, wound care, and consultation, underscoring the critical importance of health literacy and outreach for this vulnerable population.

CONCLUSION:
The nurse–advocate partnership provides the foundation for this novel program to aid a marginalized population in overcoming health inequities.
Trauma Registry Data Collection Practices and the Impact of Hospital Data Dictionaries: A National Survey
Authors: Urban Shane , Carmichael Heather , Vasilatos Angela , Moe Martin , Dumond Robbie , Kennard Lori , Vega Stephanie , Krell Regina , Cripps Michael W. , Velopulos Catherine 
Published: May 2022

BACKGROUND:
Trauma programs are required to collect a uniform set of trauma variables and submit data to regional, state, and or national registries. Programs may also collect unique data elements to support hospital-specific initiatives.

OBJECTIVE:
This study explored what additional data elements are being collected by U.S. trauma programs and the impact of having a hospital-specific data dictionary.

METHODS:
An anonymous, cross-sectional survey exploring what additional data are being collected, and the impact of having a hospital-specific data dictionary, was distributed by the Society of Trauma Nurses, Trauma System News, and the American College of Surgeons. The survey was open from July 2020 to September, 2020.

RESULTS:
There were 693 respondents from approximately 368 Level I/II trauma programs. The estimated trauma center response rate was 59.4% (n = 368/620). Level I programs had a higher response rate than Level II programs (66.9% and 53.4%, respectively).
In our sample, 85.5% of responding centers collect additional data. The most common additional data collected at Level I/II programs concerned quality improvement initiatives (70.3% and 66.1%, respectively). Other commonly collected data pertained to deaths (60.6%) and complications (50.3%).
Only 43% of responding centers (n = 161/368) have a hospital-specific data dictionary. Hospitals that collect additional data were more likely to have such a resource compared with those that do not (n = 147/315, 46.7% vs. n = 14/53, 26.4%, p = .01).

CONCLUSION:
Most trauma programs collect data outside required fields. Fewer than half define these data in a data dictionary. Centers should consider establishing a data dictionary to define data collected.
Trends in Geriatric Trauma Emergency Department Admissions During COVID-19
Authors: Sultanoğlu Hasan , Demir Mehmet Cihat , Boğan Mustafa 
Published: May 2022

BACKGROUND:
The impact of coronavirus disease-2019 (COVID-19) on geriatric trauma presenting to the emergency department is unknown.

OBJECTIVE:
To examine geriatric trauma emergency department admission trends during the COVID-19 pandemic.

METHODS:
This retrospective, observational, comparison study was conducted in an academic emergency department in Turkey. Trauma patients 65 years and older who presented to the emergency department within 1 year of March 12, 2020, were included. Patients admitted in the same date range in the previous year were included as the control group. The characteristics of the patients, injured area, and injury mechanisms were compared.

RESULTS:
Geriatric trauma admissions decreased (relative risk = 0.71, odds ratio [OR] = 0.69 [95% confidence interval, CI: 0.62, 0.77], p < .001). According to the type of injury, there was no significant difference in admissions to the emergency department (p = .318). During the pandemic, there was an increase in falls and a decrease in stab wounds and gunshot wounds (p = .001). Multiple trauma (OR = 5.56 [95% CI: 3.75, 8.23], p < .001), fall (OR = 2.41 [95% CI: 1.6, 3.73], p < .001), and-assault related injuries (OR = 4.43 [95% CI: 2.06, 9.56], p < .001) were determined as factors that increased the admissions to the emergency department compared with the prepandemic.

CONCLUSION:
Although geriatric trauma emergency department admissions decreased during the pandemic, those due to falls and assaults increased. Although curfews and social isolation resulted in a decrease in penetrating injuries, assault-related trauma has increased.
Peroral Endoscopic Myotomy Is an Effective Treatment Option for Managing Jackhammer Esophagus
Authors: Canakis Andrew , Xie Guofeng , Kim Raymond E. 
Published: May 2022

Background and Aims:
Jackhammer esophagus (JE) is a rare hypercontractile motility disorder often associated with dysphagia, regurgitation, and chest pain. In patients with clinically relevant symptoms, treatment options aim to decrease esophageal contractions. Medical, endoscopic and surgical therapies have limited long-term efficacy. The advent of peroral endoscopic myotomy (POEM) has evolved as a minimally invasive treatment option. Yet data regarding JE is scare. As such we aimed to investigate the clinical efficacy of JE.

Patients and Methods:
This was a single center retrospective study of consecutive adult patients undergoing POEM for JE from April 2018 to September 2021. All procedures were conducted by a single endoscopist. Primary outcome was clinical success, defined as Eckardt score (ES) ≤3 following the procedure.

Results:
A total of 13 patients (mean age 58, 7 females) underwent POEM with a mean duration of symptoms of 42.6 months. Preprocedure mean ES was 8.92. Nine patients were treatment naive. Pre-POEM endoluminal functional luminal imaging probe (n=10) demonstrated a distensibility index of 0.34. The average length of follow-up after POEM was 15.8 months.
There was a 92.3% (12/13) clinical success rate, with a mean post-POEM ES of 1.53. One patient’s ES improved from 12 to 1 after POEM; however, 2.5 years later she developed recurrent symptoms (ES 10). Only 1 patient had endoscopic evidence of Los Angeles grade A esophagitis. One year after POEM, 5 patients had gastroesophageal reflux disease symptoms, but only 2 required acid suppression therapy.

Conclusion:
POEM is an effective treatment modality with long-term efficacy. Larger, prospective studies are needed to validate these findings.