bluuebunny/crossref_metadata_2025_split huggingface dataset:
Safety and efficacy of tezepelumab vs. placebo in adult patients with severe uncontrolled asthma: a systematic review and meta-analysis
Authors: Shaban Abdelgalil Mahmoud , Ahmed Elrashedy Asmaa , Awad Ahmed K. , Reda Gad Eman , Ali Mahmoud M. , Abdelmoez Farahat Ramadan , Hassan Shawki Bassant , Abd-ElGawad Mohamed 
Published: December 2022

AbstractPatients with severe uncontrolled asthma still experience acute asthma symptoms and exacerbations, particularly those with non-eosinophilic inflammation who take the maximum amount of standard drug therapy. Tezepelumab, a human monoclonal antibody, can improve lung function and enhance control of asthma symptoms in those patients, regardless of the disease’s baseline characteristics. This study aims to investigate the safety and efficacy of using tezepelumab in controlling severe symptoms of uncontrolled asthma. We performed a comprehensive literature search in several databases, including PubMed, Scopus, Web of Science, Cochrane Library, and clinicaltrial.gov, using a well-established search strategy to include all relevant publications. According to our inclusion criteria, we searched for randomized controlled trials comparing tezepelumab versus placebo in patients with severe, uncontrolled asthma. We analyzed the data using The Revman 5.4 program software. The search identified 589 potential articles. After excluding studies inconsistent with selection criteria, four studies were included and analyzed qualitatively and quantitatively. The pooled effect demonstrated the better performance of tezepelumab over the placebo regarding the decrease in annualized asthma exacerbation rate (MD = − 0.74, (95% CI [− 1.04, − 0.44], p < 0.00001)), asthma control questionnaire-6 (ACQ-6) Score MD = − 0.32, (95% CI [− 0.43, − 0.21], p < 0.00001)), blood eosinophil count (MD = − 139.38 cells/mcL, (95% CI [− 150.37, − 128.39], p < 0.00001)), feNO (MD = − 10 ppb, (95% CI [− 15.81, − 4.18], p = 0.0008)) and serum total IgE (MD = − 123.51 UI/ml, (95% CI [− 206.52, − 40.50], p = 0.004)). All tezepelumab groups had higher pre-bronchodilator forced expiratory volume in 1 s than the placebo group (MD = 0.16, (95% CI [0.10, 0.21], p < 0.00001)). Higher efficacy and safety profile was detected for tezepelumab to control the exacerbations of severe uncontrolled adult asthmatics.
Synthesis of an amphiphilic vancomycin aglycone derivative inspired by polymyxins: overcoming glycopeptide resistance in Gram-positive and Gram-negative bacteria in synergy with teicoplanin in vitro
Authors: Szűcs Zsolt , Bereczki Ilona , Fenyvesi Ferenc , Herczegh Pál , Ostorházi Eszter , Borbás Anikó 
Published: December 2022

AbstractGram-negative bacteria possess intrinsic resistance to glycopeptide antibiotics so these important antibacterial medications are only suitable for the treatment of Gram-positive bacterial infections. At the same time, polymyxins are peptide antibiotics, structurally related to glycopeptides, with remarkable activity against Gram-negative bacteria. With the aim of breaking the intrinsic resistance of Gram-negative bacteria against glycopeptides, a polycationic vancomycin aglycone derivative carrying an n-decanoyl side chain and five aminoethyl groups, which resembles the structure of polymyxins, was prepared. Although the compound by itself was not active against the Gram-negative bacteria tested, it synergized with teicoplanin against Escherichia coli, Pseudomonas aeruginosa and Acinetobacter baumannii, and it was able to potentiate vancomycin against these Gram-negative strains. Moreover, it proved to be active against vancomycin- and teicoplanin-resistant Gram-positive bacteria.
Substrate and low intensity fires influence bacterial communities in longleaf pine savanna
Authors: Dao Viet Q. , Potts Stephen E. , Johnson Crystal N. , Sikes Benjamin A. , Platt William J. 
Published: December 2022

AbstractBacterial communities associated with vegetation-soil interfaces have important roles in terrestrial ecosystems. These bacterial communities, studied almost exclusively in unburnt ecosystems or those affected by rare, high-intensity wildfires, have been understudied in fire-frequented grasslands and savannas. The composition of ground-level bacterial communities was explored in an old-growth pine savanna with a centuries-long management history of prescribed fires every 1–2 years. Using 16S metabarcoding, hypotheses were tested regarding differences in bacterial families of litter and soil surface substrates in patches of ground layer vegetation that were naturally burnt or unburnt during landscape-level prescribed fires. Litter/soil substrates and fire/no fire treatments explained 67.5% of bacterial community variation and differences, driven by relative abundance shifts of specific bacterial families. Fires did not strongly affect plant or soil variables, which were not linked to bacterial community differences. Litter/soil substrates and the naturally patchy frequent fires appear to generate microhabitat heterogeneity in this pine savanna, driving responses of bacterial families. Prescribed fire management may benefit from considering how fire-altered substrate heterogeneity influences and maintains microbial diversity and function, especially in these fiery ecosystems. Frequent, low-intensity fires appear ecologically important in maintaining the diverse microbial foundation that underlie ecosystem processes and services in fire-frequented habitats.
The rate of microtubule breaking increases exponentially with curvature
Authors: Tsitkov Stanislav , Rodriguez Juan B. , Bassir Kazeruni Neda M. , Sweet May , Nitta Takahiro , Hess Henry 
Published: December 2022

AbstractMicrotubules, cylindrical assemblies of tubulin proteins with a 25 nm diameter and micrometer lengths, are a central part of the cytoskeleton and also serve as building blocks for nanobiodevices. Microtubule breaking can result from the activity of severing enzymes and mechanical stress. Breaking can lead to a loss of structural integrity, or an increase in the numbers of microtubules. We observed breaking of taxol-stabilized microtubules in a gliding motility assay where microtubules are propelled by surface-adhered kinesin-1 motor proteins. We find that over 95% of all breaking events are associated with the strong bending following pinning events (where the leading tip of the microtubule becomes stuck). Furthermore, the breaking rate increased exponentially with increasing curvature. These observations are explained by a model accounting for the complex mechanochemistry of a microtubule. The presence of severing enzymes is not required to observe breaking at rates comparable to those measured previously in cells.
Reversibility of link prediction and its application to epidemic mitigation
Authors: Sulaimany Sadegh , Mafakheri Aso 
Published: December 2022

AbstractCurrent link prediction strategies are about finding new probable strong relations to establish or weak ones to remove. An interesting strategy is utilizing link prediction to prioritize the edges in the network and finding newly probable established relations. In this paper we will introduce and explain RLP, reverse link prediction, as a new paradigm, and use popular basic scoring methods including CN, JC, AA, RA, and PA, as its core to examine. The test cases are nine datasets. Half of them are contact networks in different levels from personal contact to aviation, and another half is for covering different test situations. After reviewing the edge removal based epidemic mitigation methods, we show that RLP can be used to decrease the epidemics spreading speed as a general method with various link prediction algorithms, and here in this paper, preferential attachment (PA) has the best results overall. But the results heavily depend on the nature of the examined networks: regular, scale-free or small-world. We also propose an easy to understand criteria, path count, for comparing the efficacy of epidemics mitigation methods. RLP can be extended to use other link prediction scoring methods in various types of graphs as well.
Comparison of the effects of litter decomposition process on soil erosion under simulated rainfall
Authors: Zhu Fangfang , Cheng Jinhua 
Published: December 2022

AbstractOverland flow parameters play a pivotal role in soil erosion, which are affected by litter cover in forests. In this study, the litter layer of Pinus massoniana (Masson pine) was divided into non-decomposed and semi-decomposed layers. Seven litter coverage mass gradients, two slopes (5° and 10°), and two rainfall intensities (60 and 120 mm·h−1) were used for a systematic study of the effects of litter layer changes on overland flow dynamic characteristics. The objectives of this study were to explore the soil erosion process in litter different decomposition stages; to explore various relationships between hydraulic variables and litter characteristics. In the process of litter decomposition, overland flow patterns changed from transitional flow to laminar flow and from rapid flow to slow flow. The semi-decomposed layer’s Reynold’s number (Re), resistance coefficient (f), and soil separation rate ($${D}_{r}$$

D
r

) were lower than that of the non-decomposed layer under the same conditions. Litter coverage, runoff and the diameter of the litter were major parameters that affected the Re, f, Fr, and Dr. Shrubs with wide leaves should be selected for understory vegetation replanting. The results of this study are helpful to understand the mechanisms of litter influencing erosion processes in different decomposition stages.
Handling method affects measures of anxiety, but not chronic stress in mice
Authors: Novak Janja , Jaric Ivana , Rosso Marianna , Rufener Reto , Touma Chadi , Würbel Hanno 
Published: December 2022

AbstractStudies in mice have shown that less aversive handling methods (e.g. tunnel or cup handling) can reduce behavioural measures of anxiety in comparison to picking mice up by their tail. Despite such evidence, tail handling continues to be used routinely. Besides resistance to change accustomed procedures, this may also be due to the fact that current evidence in support of less aversive handling is mostly restricted to effects of extensive daily handling, which may not apply to routine husbandry practices. The aim of our study was to assess whether, and to what extent, different handling methods during routine husbandry induce differences in behavioural and physiological measures of stress in laboratory mice. To put the effects of handling method in perspective with chronic stress, we compared handling methods to a validated paradigm of unpredictable chronic mild stress (UCMS). We housed mice of two strains (Balb/c and C57BL/6) and both sexes either under standard laboratory conditions (CTRL) or under UCMS. Half of the animals from each housing condition were tail handled and half were tunnel handled twice per week, once during a cage change and once for a routine health check. We found strain dependent effects of handling method on behavioural measures of anxiety: tunnel handled Balb/c mice interacted with the handler more than tail handled conspecifics, and tunnel handled CTRL mice showed increased open arm exploration in the elevated plus-maze. Mice undergoing UCMS showed increased plasma corticosterone levels and reduced sucrose preference. However, we found no effect of handling method on these stress-associated measures. Our results therefore indicate that routine tail handling can affect behavioural measures of anxiety, but may not be a significant source of chronic husbandry stress. Our results also highlight strain dependent responses to handling methods.
Sex-linked markers in an Australian frog Platyplectrum ornatum (Limnodynastidae) with a small genome and homomorphic sex chromosomes
Authors: Schimek Chad , Shams Foyez , Miura Ikuo , Clulow Simon , Majtanova Zuzana , Deakin Janine , Ezaz Tariq 
Published: December 2022

AbstractAmphibians have highly diverse sex-determining modes leading to a notable interest in vertebrate sex determination and sex chromosome evolution. The identification of sex-determining systems in amphibians, however, is often difficult as a vast majority consist of homomorphic sex chromosomes making them hard to distinguish. In this study, we used Diversity Array Technology sequencing (DArTseq) to identify the sex-determining system in the ornate burrowing frog from Australia, Platyplectrum ornatum. We applied DArTseq to 44 individuals, 19 males and 25 females, collected from two locations to develop sex-linked markers. Unexpectedly, these 44 individuals were classified into two distinct population clusters based on our SNP analyses, 36 individuals in cluster 1, and 8 individuals in cluster 2. We then performed sex-linkage analyses separately in each cluster. We identified 35 sex-linked markers from cluster 1, which were all associated with maleness. Therefore, P. ornatum cluster 1 is utilising a male heterogametic (XX/XY) sex-determining system. On the other hand, we identified 210 sex-linked markers from cluster 2, of which 89 were male specific, i.e., identifying XX/XY sex determining system and 111 were female specific, i.e., identifying ZZ/ZW sex determining system, suggesting existence of either male or female heterogametic sex determining system in cluster 2. We also performed cytogenetic analyses in 1 male and 1 female from cluster 1; however, we did not detect any visible differentiation between the X and Y sex chromosomes. We also mapped sex-linked markers from the two clusters against the P. ornatum genome and our comparative analysis indicated that the sex chromosomes in both clusters shared homologies to chromosome 10 (autosome) of Rana temporaria and ZWY sex chromosome of Xenopus tropicalis. Our preliminary data suggest that it is plausible that the cluster 2 has a potential to be either male or female heterogamety in sex determination, requiring further investigation.
The impact of a short-period head-down tilt on executive function in younger adults
Authors: Mekari Said , Murphy René J. L. , MacKinnon Andrew R. S. , Hollohan Quinn , Macdougall Samantha C. , Courish Molly K. , Kimmerly Derek S. , Neyedli Heather F. 
Published: December 2022

AbstractMicrogravity has been shown to be a significant stressor on the cardiovascular system and the brain due to the redistribution of fluids that occurs in the absence of gravitational force, but there is scarce literature surrounding the effects of microgravity on cerebral hemodynamics and cognition. Understanding the early effects that simulated gravity has on cognitive function is essential for developing proper physical and cognitive countermeasures to assure safe and effective cognitive/decisions making while astronauts prepare for the initial launch or when they arrive in a microgravity environment. Therefore, this study aims to determine how an acute simulation of microgravity would alter cerebral oxygenation and executive functions. Sixty-five young healthy participants (22 ± 6 years, 21 females) completed a thirty (30) minute horizontal (00 tilt) followed by a 90-min − 6° head-down-tilt (HDT) protocol. Cerebral oxygenation in the prefrontal cortex was monitored throughout the testing session using near-infrared spectroscopy. Cognition was also measured using a computerized Stroop Task. Our results demonstrate that cerebral oxygenation was higher during HDT compared to the horizontal supine position (9.11 ± 1.3 vs. 7.51 ± 1.8, p = 0.02). For the cognitive results, the non-executive performance of the Stroop task remained stable during HDT (652.46 ± 19.3 vs. 632.49 ± 14.5, p = 0.09). However, reaction time during the executive task performance was improved after the HDT (1058 ± 195–950 ± 158 ms, p < 0.01). Our results suggest that an acute bout of simulated microgravity can enhance executive functioning.
Genotype-by-environment interaction and stability of root mealiness and other organoleptic properties of boiled cassava roots
Authors: Uchendu Kelechi , Njoku Damian N. , Ikeogu Ugochukwu N. , Dzidzienyo Daniel , Tongoona Pangirayi , Offei Samuel , Egesi Chiedozie 
Published: December 2022

AbstractGenetic enhancement of cassava aimed at improving cooking and eating quality traits is a major goal for cassava breeders to address the demand for varieties that are desirable for the fresh consumption market segment. Adoption of such cassava genotypes by consumers will largely rely not only on their agronomic performance, but also on end-user culinary qualities such as root mealiness. The study aimed to examine genotype × environment interaction (GEI) effects for root mealiness and other culinary qualities in 150 cassava genotypes and detect genotypes combining stable performance with desirable mealiness values across environments using GGE biplot analysis. Experiments were conducted using an alpha-lattice design with three replications for two years in three locations in Nigeria. The analysis of variance revealed a significant influence of genotype, environment, and GEI on the performance of genotypes. Mealiness scores showed no significant relationship with firmness values of boiled roots assessed by a penetration test, implying that large-scale rapid and accurate phenotyping of mealiness of boiled cassava roots remains a major limitation for the effective development of varieties with adequate mealiness, a good quality trait for direct consumption (boil-and-eat) as well as for pounding into ‘fufu’. The moderate broad-sense heritability estimate and relatively high genetic advance observed for root mealiness suggest that significant genetic gains can be achieved in a future hybridization program. The genotype main effects plus genotype × environment interaction (GGE) biplot analysis showed that the different test environments discriminated among the genotypes. Genotypes G80 (NR100265) and G120 (NR110512) emerged as the best performers for root mealiness in Umudike, whereas G13 (B1-50) and the check, G128 (TMEB693) performed best in Igbariam and Otobi. Based on the results of this study, five genotypes, G13 (B1-50), G34 (COB6-4), G46 (NR010161), the check, G128 (TMEB693), and G112 (NR110376), which were found to combine stability with desirable mealiness values, were the most suitable candidates to recommend for use as parents to improve existing cassava germplasm for root mealiness.
Comparison of the properties of polyimide nanocomposite films containing functionalized-graphene and organoclay as nanofillers
Authors: Choi Moon Young , Lee Seon Ju , Lim Ae Ran , Chang Jin-Hae 
Published: December 2022

AbstractPoly(amic acid) (PAA) is prepared by the reaction of dianhydride 4,4′-biphthalic anhydride and diamine bis[4-(3-aminophenoxy)phenyl]sulfone in N,N’-dimethylacetamide. Two types of fillers were dispersed in the as-synthesized PAA via a solution intercalation method; polyimide (PI) hybrid films were synthesized under various heat treatment conditions. Octylamine (C8) was introduced into graphene sheets (C8-GS) and bentonite (C8-BTN), which were then used as nanofillers in the PI hybrid films. The synthesized nanofillers were used in varying amounts of 0.25–1.00 wt% with respect to the matrix PI. The thermal and morphological properties and optical transparency of the hybrid films were investigated and compared for both C8-GS and C8-BTN at varying nanofiller content. The C8-BTN nanocomposite showed superior thermal properties, and optical transparency, and the filler was well dispersed in the PI matrix compared to the C8-GS nanocomposite. The thermal stability of the hybrid films improved upon the addition of small amounts of the nanofiller. However, beyond a certain critical filler concentration, the thermal stability declined. These results were verified through the dispersion of fillers via transmission electron microscopy.
Characteristics of rice straw decomposition and bacterial community succession for 2 consecutive years in a paddy field in southeastern China
Authors: Wang Xiya , He Ping , Xu Xinpeng , Qiu Shaojun , Zhao Shicheng 
Published: December 2022

AbstractThe characteristics of long-term rice straw decomposition and succession in the bacterial community in the double-rice system are still unclear. Here a 2-year continuous straw bag decomposition experiment was conducted to explore changes in nutrient release, enzyme activity, and bacterial community composition during rice straw decomposition in the double-rice system in Southeast China. After burial in soil, the cumulative dry matter loss rates of rice straw were 38.9%, 72.6%, and 82.7% after 2, 12, and 24 months, respectively. The change in the release rate of straw nitrogen and phosphorus was similar to the dry matter loss, but 93.5% of straw potassium was released after 1st month. Bacterial abundance and community diversity in straw increased rapidly, reaching peaks after 7 and 12 months, respectively. Straw extracellular enzyme activities were the highest in the first 2 months and then gradually decreased over time, and they significantly and positively correlated with straw decomposition rate. Straw decomposition was dominated by copiotrophic Bacilli and Flavobacteriia in the early stages and evolved to be dominated by oligotrophic Acidobacteria, Anaerolineae, Deltaproteobacteria, Saccharibacteria, and Sphingobacteriia in the later stages. Changes in the C/N and K content of straw are the main reasons for bacterial community succession during rice straw decomposition. This study can provide a scientific basis for developing efficient decomposing bacteria agents for rice straw.
Uterine artery Doppler indices throughout gestation in women with and without previous Cesarean deliveries: a prospective longitudinal case–control study
Authors: Yapan Piengbulan , Tachawatcharapunya Suphaphon , Surasereewong Supitchaya , Thongkloung Piyatida , Pooliam Julaporn , Poon Liona C. , Wataganara Tuangsit 
Published: December 2022

AbstractTo determine whether a history of previous Cesarean delivery (CD) impacts uterine artery (UtA) Doppler indices throughout pregnancy. Women with and without CD (NCD) were prospectively enrolled for sequential assessments of the UtA mean/median pulsatility index (UtA-PI), resistance index (UtA-RI), and systolic/diastolic ratio (UtA-S/D) at 11–13 + 6, 14–19 + 6, 30–34 + 6, and 35–37 + 6 weeks’ gestation. Data from 269/269, 246/257, 237/254, and 219/242 CD/NCD participants from each gestational period were available for analysis. Multiples of the median (MoMs) of UtA Doppler indices showed biphasic temporal (Δ) pattern; with an initial dropping until the second trimester, then a subsequent elevation until late in pregnancy (p < 0.05). The measurements and Δs of the UtA indices between CD and NCD were not different (p > 0.05). Mixed-effects modelling ruled out effects from nulliparity (n = 0 and 167 for CD and NCD, respectively) (p > 0.05). History of CD neither influenced the measurements nor the temporal changes of the UtA Doppler indices throughout pregnancy. The biphasic Δs of UtA Doppler indices added to the longitudinal data pool, and may aid in future development of a more personalized prediction using sequential/contingent methodologies, which may reduce the false results from the current cross-sectional screening.