bluuebunny/crossref_metadata_2025_split huggingface dataset:
Dynamical Impacts of Stratospheric QBO on the Global Circulation up to the Lower Thermosphere
Authors: Koval A. V. , Gavrilov N. M. , Pogoreltsev A. I. , Kandieva K. K. 
Published: February 2022

AbstractTo estimate reaction of the atmospheric circulation in the middle and upper atmosphere to changes in phases of equatorial stratospheric quasi‐biennial oscillation (QBO), the three‐dimensional nonlinear middle and upper atmosphere model (MUAM) is used. This model allows continuous simulations of atmospheric wave propagation from the ground to the thermosphere (300 km and above). The main atmospheric hydrodynamic fields (wind and temperature), components of residual meridional circulation (RMC), and fluxes of mass are calculated based on ensembles containing 16 pairs of model runs for initial conditions corresponding to easterly and westerly QBO phases. To minimize uncertainties in determination of the QBO phases, an approach based on the usage of empirical orthogonal functions (EOFs) is applied. Statistically significant results are obtained illustrating how changes in the planetary waves (PWs) structures promote the spread of QBO effects to polar latitudes and to the thermosphere, through changes in the Eliassen‐Palm (EP) flux and its divergence, or through the formation of an eddy meridional circulation. The main contribution to the cooling of the polar winter stratosphere during the westerly QBO is made by the weakening of wave activity, in particular, the weakening of the vertical EP flux, which leads to a weakening of the poleward heat flux. The sensitivity of the wave‐induced eddy circulation to changes in the QBO phase is higher than that of the RMC, demonstrating that PWs propagating from the lower troposphere are the most important mechanism for the transfer of global circulation disturbances from the equatorial QBO region to polar latitudes.
Subglacial Water Flow Over an Antarctic Palaeo‐Ice Stream Bed
Authors: Hogan K. A. , Arnold N. S. , Larter R. D. , Kirkham J. D. , Noormets R. , Ó Cofaigh C. , Golledge N. R. , Dowdeswell J. A. 
Published: February 2022

AbstractThe subglacial hydrological system exerts a critical control on the dynamic behavior of the overlying ice because its configuration affects the degree of basal lubrication between the ice and the bed. Yet, this component of the glaciological system is notoriously hard to access and observe, particularly over timescales longer than the satellite era. In Antarctica, abundant evidence for past subglacial water flow over former ice‐sheet beds exists around the peripheries of the ice sheet including networks of huge channels carved into bedrock (now submarine) on the Pacific margin of West Antarctica. Here, we combine detailed bathymetric investigations of a channel system in Marguerite Trough, a major palaeo‐ice stream bed, with numerical hydrological modeling to explore subglacial water accumulation, routing and potential for erosion over decadal‐centennial timescales. Detailed channel morphologies from remotely operated vehicle surveys indicate multiple stages of localized incision, and the occurrence of potholes, some gigantic in scale, suggests incision by turbulent water carrying a significant bedload. Further, the modeling indicates that subglacial water is available during deglaciation and was likely released in episodic drainage events, from subglacial lakes, varying in magnitude over time. Our observations support previous assertions that these huge bedrock channel systems were incised over multiple glacial cycles through episodic subglacial lake drainage events; however, here we present a viable pattern for subglacial drainage at times when the ice sheet existed over the continental shelf and was capable of continuing to erode the bedrock substrate.
Senescence and impaired DNA damage responses in alpha-synucleinopathy models
Authors: Yoon Ye-Seul , You Jueng Soo , Kim Tae-Kyung , Ahn Woo Jung , Kim Myoung Jun , Son Keun Hong , Ricarte Diadem , Ortiz Darlene , Lee Seung-Jae , Lee He-Jin 
Published: February 2022

Abstractα-Synuclein is a crucial element in the pathogenesis of Parkinson’s disease (PD) and related neurological diseases. Although numerous studies have presented potential mechanisms underlying its pathogenesis, the understanding of α-synuclein-mediated neurodegeneration remains far from complete. Here, we show that overexpression of α-synuclein leads to impaired DNA repair and cellular senescence. Transcriptome analysis showed that α-synuclein overexpression led to cellular senescence with activation of the p53 pathway and DNA damage responses (DDRs). Chromatin immunoprecipitation analyses using p53 and γH2AX, chromosomal markers of DNA damage, revealed that these proteins bind to promoters and regulate the expression of DDR and cellular senescence genes. Cellular marker analyses confirmed cellular senescence and the accumulation of DNA double-strand breaks. The non-homologous end joining (NHEJ) DNA repair pathway was activated in α-synuclein-overexpressing cells. However, the expression of MRE11, a key component of the DSB repair system, was reduced, suggesting that the repair pathway induction was incomplete. Neuropathological examination of α-synuclein transgenic mice showed increased levels of phospho-α-synuclein and DNA double-strand breaks, as well as markers of cellular senescence, at an early, presymptomatic stage. These results suggest that the accumulation of DNA double-strand breaks (DSBs) and cellular senescence are intermediaries of α-synuclein-induced pathogenesis in PD.
Probing the orbital angular momentum of intense vortex pulses with strong-field ionization
Authors: Fang Yiqi , Guo Zhenning , Ge Peipei , Dou Yankun , Deng Yongkai , Gong Qihuang , Liu Yunquan 
Published: February 2022

AbstractWith the rapid development of femtosecond lasers, the generation and application of optical vortices have been extended to the regime of intense-light-matter interaction. The characterization of the orbital angular momentum (OAM) of intense vortex pulses is very critical. Here, we propose and demonstrate a novel photoelectron-based scheme that can in situ distinguish the OAM of the focused intense femtosecond optical vortices without the modification of light helical phase. We employ two-color co-rotating intense circular fields in the strong-field photoionization experiment, in which one color light field is a plane wave serving as the probing pulses and the other one is the vortex pulses whose OAM needs to be characterized. We show that by controlling the spatial profile of the probing pulses, the OAM of the vortex pulses can be clearly identified by measuring the corresponding photoelectron momentum distributions or angle-resolved yields. This work provides a novel in situ detection scenario for the light pulse vorticity and has implications for the studies of ultrafast and intense complex light fields with optical OAM.
Wearable multichannel pulse condition monitoring system based on flexible pressure sensor arrays
Authors: Wang Jie , Zhu Yirun , Wu Zhiyong , Zhang Yunlin , Lin Jian , Chen Tao , Liu Huicong , Wang Fengxia , Sun Lining 
Published: February 2022

AbstractPulse diagnosis is an irreplaceable part of traditional Chinese medical science. However, application of the traditional pulse monitoring method was restricted in the modernization of Chinese medical science since it was difficult to capture real signals and integrate obscure feelings with a modern data platform. Herein, a novel multichannel pulse monitoring platform based on traditional Chinese medical science pulse theory and wearable electronics was proposed. The pulse sensing platform simultaneously detected pulse conditions at three pulse positions (Chi, Cun, and Guan). These signals were fitted to smooth surfaces to enable 3-dimensional pulse mapping, which vividly revealed the shape of the pulse length and width and compensated for the shortcomings of traditional single-point pulse sensors. Moreover, the pulse sensing system could measure the pulse signals from different individuals with different conditions and distinguish the differences in pulse signals. In addition, this system could provide full information on the temporal and spatial dimensions of a person’s pulse waveform, which is similar to the true feelings of doctors’ fingertips. This innovative, cost-effective, easily designed pulse monitoring platform based on flexible pressure sensor arrays may provide novel applications in modernization of Chinese medical science or intelligent health care.
The amplitude of fNIRS hemodynamic response in the visual cortex unmasks autistic traits in typically developing children
Authors: Mazziotti Raffaele , Scaffei Elena , Conti Eugenia , Marchi Viviana , Rizzi Riccardo , Cioni Giovanni , Battini Roberta , Baroncelli Laura 
Published: February 2022

AbstractAutistic traits represent a continuum dimension across the population, with autism spectrum disorder (ASD) being the extreme end of the distribution. Accumulating evidence shows that neuroanatomical and neurofunctional profiles described in relatives of ASD individuals reflect an intermediate neurobiological pattern between the clinical population and healthy controls. This suggests that quantitative measures detecting autistic traits in the general population represent potential candidates for the development of biomarkers identifying early pathophysiological processes associated with ASD. Functional near-infrared spectroscopy (fNIRS) has been extensively employed to investigate neural development and function. In contrast, the potential of fNIRS to define reliable biomarkers of brain activity has been barely explored. Features of non-invasiveness, portability, ease of administration, and low-operating costs make fNIRS a suitable instrument to assess brain function for differential diagnosis, follow-up, analysis of treatment outcomes, and personalized medicine in several neurological conditions. Here, we introduce a novel standardized procedure with high entertaining value to measure hemodynamic responses (HDR) in the occipital cortex of adult subjects and children. We found that the variability of evoked HDR correlates with the autistic traits of children, assessed by the Autism-Spectrum Quotient. Interestingly, HDR amplitude was especially linked to social and communication features, representing the core symptoms of ASD. These findings establish a quick and easy strategy for measuring visually-evoked cortical activity with fNIRS that optimize the compliance of young subjects, setting the background for testing the diagnostic value of fNIRS visual measurements in the ASD clinical population.
Optimized cyclosporine starting dose may reduce risk of acute GvHD after allogeneic hematopoietic cell transplantation: a single-center cohort study
Authors: Héritier Jérémie , Medinger Michael , Heim Dominik , Baldomero Helen , Arranto Christian , Halter Jörg P. , Passweg Jakob R. , Kleber Martina 
Published: February 2022

AbstractCyclosporine A (CsA) is commonly used for Graft versus Host Disease (GvHD) prophylaxis at a recommended starting dose of 3 mg/kg/d: Evidence for the effect of different CsA starting doses on GvHD risk is limited. We therefore estimated the association of 5 mg/kg/d (CsA5) and 3 mg/kg/d (CsA3) CsA starting doses with GvHD risk in two consecutive cohorts of allogeneic hematopoietic cell transplantation (allo-HCT) patients, exploring potential risk factors for incident acute GvHD, with a focus on CsA starting dose. We analyzed 519 patients within CsA5 (n = 153) and CsA3 (n = 366). The cumulative incidence function of acute GvHD grade ≥2 was higher in the CsA3 compared to the CsA5 group (41% vs. 33%, respectively; p = 0.043), without impacting chronic GvHD. In multivariable analysis, a CsA starting dose of 3 mg/kg/d, no ATG use, unrelated donor and high to very high disease risk index were significantly associated with acute GvHD grade ≥2. A higher CsA starting dose of 5 mg/kg/d was independently associated with lower acute GvHD risk, and higher CsA levels in the early period after allo-HCT were reached.
PTBP3 modulates P53 expression and promotes colorectal cancer cell proliferation by maintaining UBE4A mRNA stability
Authors: Xie Canbin , Long Fei , Li Liang , Li Xiaorong , Ma Min , Lu Zhixing , Wu Runliu , Zhang Yi , Huang Lihua , Chou Jing , Gong Ni , Hu Gui , Lin Changwei 
Published: February 2022

AbstractThe RNA binding protein PTBP3 was recently reported to play a critical role in multiple cancers, and the molecular mechanisms involved RNA splicing, 3′ end processing and translation. However, the role of PTBP3 in colorectal cancer (CRC) remains poorly explored. Herein, PTBP3 was upregulated in CRC and associated with a poor prognosis. PTBP3 knockdown in colorectal cancer cell lines restricted CRC proliferative capacities in vitro and in vivo. Mechanistically, PTBP3 regulated the expression of the E3 ubiquitin ligase UBE4A by binding the 3′ UTR of its mRNA, preventing its degradation. UBE4A participated in P53 degradation, and PTBP3 knockdown in colorectal cancer cell lines showed increased P53 expression. UBE4A overexpression rescued PTBP3 knockdown-induced inhibition of CRC cell proliferation and P53 expression. Our results demonstrated that PTBP3 plays an essential role in CRC cell proliferation by stabilizing UBE4A to regulate P53 expression and may serve as a new prognostic biomarker and effective therapeutic target for CRC.
Myocardin/microRNA-30a/Beclin1 signaling controls the phenotypic modulation of vascular smooth muscle cells by regulating autophagy
Authors: Shi Danyang , Ding Jinhua , Xie Shouqiang , Huang Lei , Zhang Hongmin , Chen Xiaojie , Ren Xuejun , Zhou Sa , He Hongpeng , Ma Wenjian , Zhang Tongcun , Wang Nan 
Published: February 2022

AbstractUpon vascular injury, vascular smooth muscle cells (VSMCs) change from a contractile phenotype to a synthetic phenotype, thereby leading to atherogenesis and arterial restenosis. Myocardin (MYOCD) is essential for maintaining the contractile phenotype of VSMCs. Deletion of MYOCD in VSMCs triggers autophagy. However, the molecular mechanism underlying the effect of MYOCD on autophagy is not clear. In this study, knockdown of MYOCD in human aortic VSMCs (HA-VSMCs) triggered autophagy and diminished the expression of SMC contractile proteins. Inhibition of autophagy in MYOCD-knockdown cells restored the expression of contractile proteins. MYOCD activated the transcription of miR-30a by binding to the CArG box present in its promoter, as confirmed by luciferase reporter and chromatin immune coprecipitation assays, while miR-30a decreased the expression of autophagy protein-6 (ATG6, also known as beclin1) by targeting its 3′UTR. Restoring the expression of miR-30a in MYOCD-knockdown cells upregulated the levels of contractile proteins. Treatment of VSMCs with platelet-derived growth factor type BB (PDGF-BB) resulted in the transformation of VSMCs to a proliferative phenotype. A low level of miR-30a was observed in PDGF-BB-treated HA-VSMCs, and re-expression of miR-30a led to a decrease in proliferative marker expression. Furthermore, using a wire injury mouse model, we found that miR-30a expression was significantly downregulated in the arterial tissues of mice and that restoration of miR-30a expression at the injured site abolished neointimal formation. Herein, MYOCD could inhibit autophagy by activating the transcription of miR-30a and that miR-30a-mediated autophagy defects could inhibit intimal hyperplasia in a carotid arterial injury model.
Attenuation of ischemia–reperfusion injury by intracoronary chelating agent administration
Authors: Han Donghoon , Kang Si-Hyuck , Yoon Chang-Hwan , Youn Tae-Jin , Chae In-Ho 
Published: February 2022

AbstractIschemia–reperfusion (IR) injury accelerates myocardial injury sustained during the myocardial ischemic period and thus abrogates the benefit of reperfusion therapy in patients with acute myocardial infarction. We investigated the efficacy of intracoronary ethylenediaminetetraacetic acid (EDTA) administration as an adjunctive treatment to coronary intervention to reduce IR injury in a swine model. We occluded the left anterior descending artery for 1 h. From the time of reperfusion, we infused 50 mL of EDTA-based chelating agent via the coronary artery in the EDTA group and normal saline in the control group. IR injury was identified by myocardial edema on echocardiography. Tetrazolium chloride assay revealed that the infarct size was significantly lower in the EDTA group than in the control group, and the salvage percentage was higher. Electron microscopy demonstrated that the mitochondrial loss in the cardiomyocytes of the infarcted area was significantly lower in the EDTA group than in the control group. Echocardiography after 4 weeks showed that the remodeling of the left ventricle was significantly less in the EDTA group than in the control group: end-diastolic dimension 38.8 ± 3.3 mm vs. 43.9 ± 3.7 mm (n = 10, p = 0.0089). Left ventricular ejection fraction was higher in the EDTA group (45.3 ± 10.3 vs. 34.4 ± 11.8, n = 10, respectively, p = 0.031). In a swine model, intracoronary administration of an EDTA chelating agent reduced infarct size, mitochondrial damage, and post-infarct remodeling. This result warrants further clinical study evaluating the efficacy of the EDTA chelating agent in patients with ST-segment elevation myocardial infarction.
Rapid assembly of colorless antimicrobial and anti-odor coatings from polyphenols and silver
Authors: Richardson Joseph J. , Liao Wenting , Li Jincai , Cheng Bohan , Wang Chenyu , Maruyama Taku , Tardy Blaise L. , Guo Junling , Zhao Lingyun , Aw Wanping , Ejima Hirotaka 
Published: February 2022

AbstractThe development of antimicrobial fabrics and textiles that can sustainably inhibit a broad spectrum of microbes is crucial for protecting against pathogens in various environments. However, engineering antimicrobial textiles is challenging due to issues with discoloration and inhibited breathability, the use of harmful or harsh reagents and synthesis conditions, and complex and/or time-consuming processing. Herein, we develop a facile and rapid approach to deposit antimicrobial coatings using universally adherent plant polyphenols and antimicrobial silver ions. Importantly, the coatings are colorless, thin (< 10 nm), rapidly assembled (< 20 min), and can be deposited via immersion or spraying. We demonstrate that these metal-phenolic coatings on textiles can inhibit lipid-enveloped viruses over one thousand times more efficiently than coatings composed of other metal ions, while maintaining their efficacy even after 5 washes. Moreover, the coatings also inhibit Gram positive and negative bacteria, and fungi, and can prevent odors on clothes for at least 10 washes. Collectively, the ease of synthesis, use of simple and safe precursors, and amenability to at-home and industrial application suggests that the coatings will find practical application in various settings.
Energy allocation shifts from sperm production to self-maintenance at low temperatures in male bats
Authors: Komar Ewa , Fasel Nicolas J. , Szafrańska Paulina A. , Dechmann D. K. N. , Zegarek Marcin , Ruczyński Ireneusz 
Published: February 2022

AbstractThe ability of animals to produce endogenous heat provides a buffer against environmental changes but also incurs high energetic costs. Especially small endothermic mammals have high energy demands. Some temperate-zone species (heterotherms) regularly use torpor, which slows down their entire metabolism but also potentially delays reproduction, to compensate for this. We used a unique experimental approach to test the consequences of extended low and high ambient temperatures on the trade-off in energy allocation to body mass maintenance, thermoregulation effort and seasonal sexual maturation in temperate zone male bats. We showed that long exposure to low ambient temperature shifts energy allocation away from sexual maturation to self-maintenance and results in a delay of sperm maturation by as much as an entire month. This effect was partially buffered by higher body mass. Heavier bats were able to afford more intensive thermoregulation and consequently speed up maturation. Interestingly, bats at constant high temperatures avoided deep torpor and matured faster than those at low temperatures, but sperm production was also slower than under natural conditions. Our results show that not only low, but also constant high ambient temperatures are detrimental during seasonal sexual maturation and the trade-off between investing into self-maintenance and fitness is a finely tuned compromise.
Application of a robotics path planning algorithm to assess the risk of mobile bearing dislocation in lateral unicompartmental knee replacement
Authors: Yang Irene , Gammell Jonathan D. , Murray David W. , Mellon Stephen J. 
Published: February 2022

AbstractDue to ligament laxity, bearing dislocation occurs in 1–6% of Oxford Domed Lateral (ODL) replacements with most dislocations occurring medially. Dislocations were studied using a previously built mechanical rig, however testing using the rig was inefficient. The aim of this study was to develop a better tool that was more reliable and efficient. An established robotics software package, the Open Motion Planning Library, was modified to accept the ODL components. Using a robotics path planning algorithm, the mobile bearing was allowed to find a way out from between the femoral and tibial components i.e. to dislocate. Testing assessed a range of clinically relevant positions of the femoral component relative to the tibial component. Dislocations were labelled as medial, lateral, anterior or posterior depending on the dislocation direction. The Distraction to Dislocation (DD) measured the minimum vertical distraction of the femoral component from the tibial component for a dislocation to occur. Results were validated against the mechanical rig. Statistical analysis of medial dislocation showed excellent agreement with an intraclass correlation value of 0.993 (95% CI 0.982–0.998). All DDs from the dislocation analysis tool were within 1 mm of the mechanical rig DDs with results sharing a remarkably similar trend. The robotics dislocation analysis tool output DDs which were marginally higher than the manual mechanical rig: 0.50 mm anteriorly, 0.25 mm posteriorly and 0.50 mm laterally. Medially, the computational DD differed on average by 0.09 mm (stand deviation: 0.2026 mm). Our study describes the development and validation of a novel robotics dislocation analysis tool, which allows mobile bearing dislocation risk quantification. The tool may also be used to improve surgical implantation parameters and to assess new implant designs that aim to reduce the medial dislocation risk to an acceptable level.
p38 activation occurs mainly in microglia in the P301S Tauopathy mouse model
Authors: Perea Juan R. , García Esther , Vallés-Saiz Laura , Cuadros Raquel , Hernández Félix , Bolós Marta , Avila Jesús 
Published: February 2022

AbstractTauopathies are a group of neurodegenerative diseases characterized by the accumulation of hyperphosphorylated tau protein in the brain. Many of these pathologies also present an inflammatory component determined by the activation of microglia, the resident immune cells of the brain. p38 MAPK is one of the molecular pathways involved in neuroinflammation. Although this kinase is expressed mainly in glia, its activation in certain neurodegenerative diseases such as Alzheimer's Disease has been associated with its ability to phosphorylate tau in neurons. Using the P301S Tauopathy mouse model, here we show that p38 activation increases during aging and that this occurs mainly in microglia of the hippocampus rather than in neurons. Furthermore, we have observed that these mice present an activated microglial variant called rod microglia. Interestingly, p38 activation in this subpopulation of microglia is decreased. On the basis of our findings, we propose that rod microglia might have a neuroprotective phenotype in the context of tau pathology.