bluuebunny/crossref_metadata_2025_split huggingface dataset:
Reproductive consequences of transient pathogen exposure across host genotypes and generations
Authors: Ordovás‐Montañés María , Preston Gail M. , Drew Georgia C. , Rafaluk‐Mohr Charlotte , King Kayla C. 
Published: March 2022

AbstractTo maximize fitness upon pathogenic infection, host organisms might reallocate energy and resources among life‐history traits, such as reproduction and defense. The fitness costs of infection can result from both immune upregulation and direct pathogen exploitation. The extent to which these costs, separately and together, vary by host genotype and across generations is unknown. We attempted to disentangle these costs by transiently exposing wild isolates and a lab‐domesticated strain of Caenorhabditis elegans nematodes to the pathogen Staphylococcus aureus, using exposure to heat‐killed pathogens to distinguish costs due to immune upregulation and pathogen exploitation. We found that host nematodes exhibit a short‐term delay in offspring production when exposed to live and heat‐killed pathogen, but their lifetime fecundity (total offspring produced) recovered to control levels. We also found genetic variation between host isolates for both cumulative offspring production and magnitude of fitness costs. We further investigated whether there were maternal pathogen exposure costs (or benefits) to offspring and revealed a positive correlation between the magnitude of the pathogen‐induced delay in the parent's first day of reproduction and the cost to offspring population growth. Our findings highlight the capacity for hosts to recover fecundity after transient exposure to a pathogen.
Host and geographic barriers shape the competition, coexistence, and extinction patterns of influenza A (H1N1) viruses
Authors: Cheng Chaoyuan , Holyoak Marcel , Xu Lei , Li Jing , Liu Wenjun , Stenseth Nils Chr. , Zhang Zhibin 
Published: March 2022

AbstractThe influenza virus mutates and spreads rapidly, making it suitable for studying evolutionary and ecological processes. The ecological factors and processes by which different lineages of influenza compete or coexist within hosts through time and across geographical space are poorly known. We hypothesized that competition would be stronger for influenza viruses infecting the same host compared to different hosts (the Host Barrier Hypothesis), and for those with a higher cross‐region transmission intensity (the Geographic Barrier Hypothesis). Using available sequences of the influenza A (H1N1) virus in GenBank, we identified six lineages, twelve clades, and several replacement events. We found that human‐hosted lineages had a higher cross‐region transmission intensity than swine‐hosted lineages. Co‐occurrence probabilities of lineages infecting the same host were lower than those infecting different hosts, and human‐hosted lineages had lower co‐occurrence probabilities and genetic diversity than swine‐hosted lineages. These results show that H1N1 lineages infecting the same host or with high cross‐region transmission rates experienced stronger competition and extinction pressures than those infecting different hosts or with low cross‐region transmission. Our study highlights how host and geographic barriers shape the competition, extinction, and coexistence patterns of H1N1 lineages and clades.
Rare, common, alien and native species follow different rules in an understory plant community
Authors: Reeve Sarah , Deane David C. , McGrannachan Chris , Horner Gillis , Hui Cang , McGeoch Melodie 
Published: March 2022

AbstractBiological invasions are a leading threat to biodiversity globally. Increasingly, ecosystems experience multiple introductions, which can have significant effects on patterns of diversity. The way these communities assemble will depend partly on whether rare and common alien species respond to environmental predictors in the same manner as rare and common native species, but this is not well understood. To examine this question across four national parks in south‐eastern Australia, we sampled the understory plant community of eucalypt‐dominated dry forest subject to multiple plant introductions. The drivers of diversity and turnover in alien and native species of contrasting frequency of occurrence (low, intermediate, and high) were each tested individually. We found alien species diversity and turnover were both strongly associated with abiotic conditions (e.g., soil pH), while distance had little influence because of the greater extent of occurrence and more homogeneous composition of common aliens. In contrast, native species diversity was not associated with abiotic conditions and their turnover was as strongly influenced by distance as by abiotic conditions. In both alien and native species, however, the most important predictors of turnover changed with frequency of occurrence. Although local coexistence appears to be facilitated by life history trade‐offs, species richness of aliens and natives was negatively correlated and native species might face greater competition in areas with more neutral soils (e.g., pH > ~5.5) where alien richness and relative frequency were both highest. We conclude that diversity and turnover in the generally more widespread alien species are mainly driven by species sorting along an environmental gradient associated with pH and nutrient availability, whereas turnover of native species is driven by more neutral processes associated with dispersal limitation. We show alien and native plant species respond to different environmental factors, as do rare and common species within each component.
A community and functional comparison of coral and reef fish assemblages between four decades of coastal urbanisation and thermal stress
Authors: Cook Katie M. , Yamagiwa Hirotaka , Beger Maria , Masucci Giovanni Diego , Ross Stuart , Lee Hui Yian Theodora , Stuart‐Smith Rick D. , Reimer James Davis 
Published: March 2022

Abstract

Urbanized coral reefs experience anthropogenic disturbances caused by coastal development, pollution, and nutrient runoff, resulting in turbid, marginal conditions in which only certain species can persist. Mortality effects are exacerbated by increasingly regular thermal stress events, leading to shifts towards novel communities dominated by habitat generalists and species with low structural complexity.

There is limited data on the turnover processes that occur due to this convergence of anthropogenic stressors, and how novel urban ecosystems are structured both at the community and functional levels. As such, it is unclear how they will respond to future disturbance events.

Here, we examine the patterns of coral reef community change and determine whether ecosystem functions provided by specialist species are lost post‐disturbance. We present a comparison of community and functional trait‐based changes for scleractinian coral genera and reef fish species assemblages subject to coastal development, coastal modification, and mass bleaching between two time periods, 1975–1976 and 2018, in Nakagusuku Bay, Okinawa, Japan.

We observed an increase in fish habitat generalists, a dominance shift from branching to massive/sub‐massive corals and increasing site‐based coral genera richness between years. Fish and coral communities significantly reassembled, but functional trait‐based multivariate space remained constant, indicating a turnover of species with similar traits. A compression of coral habitat occurred, with shallow (<5 m) and deep (>8 m) coral genera shifting towards the mid‐depths (5–8 m).

We show that although reef species assemblages altered post disturbance, new communities retained similar ecosystem functions. This result could be linked to the stressors experienced by urban reefs, which reflect those that will occur at an increasing frequency globally in the near future. Yet, even after shifts to disturbed communities, these fully functioning reef systems may maintain high conservation value.
Ecological impacts of photosynthetic light harvesting in changing aquatic environments: A systematic literature map
Authors: Hintz Nils Hendrik , Schulze Brian , Wacker Alexander , Striebel Maren 
Published: March 2022

AbstractUnderwater light is spatially as well as temporally variable and directly affects phytoplankton growth and competition. Here we systematically (following the guidelines of PRISMA‐EcoEvo) searched and screened the published literature resulting in 640 individual articles. We mapped the conducted research for the objectives of (1) phytoplankton fundamental responses to light, (2) effects of light on the competition between phytoplankton species, and (3) effects of climate‐change‐induced changes in the light availability in aquatic ecosystems. Among the fundamental responses of phytoplankton to light, the effects of light intensity (quantity, as measure of total photon or energy flux) were investigated in most identified studies. The effects of the light spectrum (quality) that via species‐specific light absorbance result in direct consequences on species competition emerged more recently. Complexity in competition arises due to variability and fluctuations in light which effects are sparsely investigated on community level. Predictions regarding future climate change scenarios included changes in in stratification and mixing, lake and coastal ocean darkening, UV radiation, ice melting as well as light pollution which affect the underwater light‐climate. Generalization of consequences is difficult due to a high variability, interactions of consequences as well as a lack in sustained timeseries and holistic approaches. Nevertheless, our systematic literature map, and the identified articles within, provide a comprehensive overview and shall guide prospective research.
Combined influence of food availability and agricultural intensification on a declining aerial insectivore
Authors: Garrett Daniel R. , Pelletier Fanie , Garant Dany , Bélisle Marc 
Published: March 2022

AbstractAerial insectivores show worldwide population declines coinciding with shifts in agricultural practices. Increasing reliance on certain agricultural practices is thought to have led to an overall reduction in insect abundance that negatively affects aerial insectivore fitness. The relationship between prey availability and the fitness of insectivores may thus vary with the extent of agricultural intensity. It is therefore imperative to quantify the strength and direction of these associations. Here we used data from an 11‐year study monitoring the breeding of Tree Swallows (Tachycineta bicolor) and the availability of Diptera (their main prey) across a gradient of agricultural intensification in southern Québec, Canada. This gradient was characterized by a shift in agricultural production, whereby landscapes composed of forage and pastures represented less agro‐intensive landscapes and those focusing on large‐scale arable row crop monocultures, such as corn (Zea mays) or soybean (Glycine max) that are innately associated with significant mechanization and agro‐chemical inputs, represented more agro‐intensive landscapes. We evaluated the landscape characteristics affecting prey availability and how this relationship influences the fledging success, duration of the nestling period, fledgling body mass, and wing length as these variables are known to influence the population dynamics of this species. Diptera availability was greatest within predominately forested landscapes, while within landscapes dominated by agriculture, it was marginally greater in less agro‐intensive areas. Of the measured fitness and body condition proxies, both fledging success and nestling body mass were positively related to prey availability. The impact of prey availability varied across the agricultural gradient as fledging success improved with increasing prey levels within forage landscapes yet declined in more agro‐intensive landscapes. Finally, after accounting for prey availability, fledging success was lowest, nestling periods were the longest, and wing length of fledglings were shortest within more agro‐intensive landscapes. Our results highlight the interacting roles that aerial insect availability and agricultural intensification have on the fitness of aerial insectivores, and by extension how food availability may interact with other aspects of breeding habitats to influence the population dynamics of predators.
Floral turnover and climate drive seasonal bee diversity along a tropical elevation gradient
Authors: Dzekashu Fairo F. , Yusuf Abdullahi A. , Pirk Christian W. W. , Steffan‐Dewenter Ingolf , Lattorff H. Michael G. , Peters Marcell K. 
Published: March 2022

AbstractThe contribution of seasonality in species communities to elevational diversity of tropical insects remains poorly understood. We here assessed seasonal patterns and drivers of bee diversity in the Eastern Afromontane Biodiversity Hotspot, Kenya, to understand the contribution of seasonality to elevational biodiversity patterns. Bee species and plant species visited by bees were recorded on 50 study plots in regrowth vegetation across four major seasons along two elevation gradients from 525 to 2530 m above sea level. Bees were sampled by transect walks using sweep nets and aspirators. We examined how local species richness (α‐diversity) and seasonal changes in local species communities (β‐diversity) contribute to species richness across seasons (γ‐diversity) along elevation gradients. Using a multimodel inference framework, we identified the contribution of climate and floral seasonality to elevational patterns in bee diversity. We found that both α‐ and γ‐diversity decreased with elevation. Seasonal β‐diversity decreased with elevation and the high turnover of species across seasons contributed to a considerably higher γ‐ than α‐diversity on study plots. A combination of seasonality in climate and the seasonal turnover of floral resources best explained the seasonality in bee species communities (seasonal β‐diversity). We, therefore, conclude that, despite the more stable, and favorable climatic conditions in the tropics (in comparison to temperate regions), climatic seasonality and its influence on bees' floral resources largely determined seasonal patterns of bee species diversity along elevation gradients on tropical mountains.
Community stability is related to animal diversity change
Authors: Jarzyna Marta A. , Norman Kari E. A. , LaMontagne Jalene M. , Helmus Matthew R. , Li Daijiang , Parker Stephanie M. , Perez Rocha Mariana , Record Sydne , Sokol Eric R. , Zarnetske Phoebe L. , Surasinghe Thilina D. 
Published: March 2022

AbstractUnderstanding the drivers of community stability in times of increasing anthropogenic pressure is an urgent issue. Biodiversity is known to promote community stability, but studies of the biodiversity–stability relationship rarely consider the full complexity of biodiversity change. Furthermore, finding generalities that hold across taxonomic groups and spatial and temporal scales remains challenging because most investigations have narrow taxonomic, spatial, and temporal scopes. We used organismal data collected through the National Ecological Observatory Network (NEON) at sites across the contiguous United States to evaluate linkages between community stability and biodiversity change for four taxonomic groups: small mammals, ground beetles, fish, and freshwater macroinvertebrates. We defined community stability as constancy of aggregate species' abundance. We quantified change in biodiversity as (1) dissimilarity in community taxonomic and functional composition and species replacement and richness change components of that dissimilarity and (2) change in species' abundance distributions as captured by change in species rank, richness, and evenness. We found that community stability increased with species replacement and with contribution of species replacement to overall dissimilarity for all taxonomic groups, but declined with increasing change in species richness and evenness. This is consistent with the notion that temporal fluctuations in species abundance can help stabilize community properties. We also found that community stability was highest when change in community functional composition was either lower or higher than expected given reshuffling of each community's taxonomic composition. This suggests that long‐term community stability can result from fluctuations of functionally similar species in assemblages with high taxonomic reshuffling. On the contrary, the functional uniqueness of fluctuating species compensates for lower taxonomic reshuffling to drive stabilization of community properties. Our study provides an initial assessment of the relationship between community stability and biodiversity change and illustrates the utility of fine temporal resolution data collected across ecosystems and biomes to understand the general mechanisms underlying biodiversity–stability relationships.
Effective and feasible mechanisms to support native invertebrate pollinators in agricultural landscapes: A meta‐analysis
Authors: Aslan Clare E. , Haubensak Karen A. , Grady Kevin C. 
Published: March 2022

AbstractPollinator declines have emerged as a major conservation concern across a wide diversity of systems and taxa worldwide. In response to these concerns, active efforts to conserve pollinators are increasingly considered in agricultural landscape design and management, natural area management, and public land decision‐making. An important conservation challenge is translating these efforts to feasible recommendations that agriculturalists across a diversity of systems and contexts can employ to support pollinator communities. In order to develop such a toolbox for agriculturalists, we conducted a meta‐analysis to examine feasible management practices, tools, or decisions, employed in agricultural landscapes, that directly impact pollinator forage and nest site resources. Our search terms netted a total of 743 unique references; from this, we developed a dataset of 209 unique records, derived from 89 unique references, for inclusion in our meta‐analysis. We found that across all treatments aimed at boosting pollinators, there were significant increases in bee abundance, bee species richness, and overall pollinator abundance and visitation rate. We also found specifically that across all study types, the following practices resulted in positive changes in pollinator community responses: reduced distance to natural areas, reduced regional intensity of human modification, increased quantity and quality of pollinator resources within a focal system, plantings adjacent to agricultural areas, and the use of nonconventional agricultural practices. The most consistent pollinator response to treatments was bee species richness, which was significantly increased by plantings adjacent to agricultural areas, distance from natural areas, and quantity and diversity of pollinator resources. Bee species richness also decreased with intensity of human modification. These findings are presented in a toolbox for agriculturalists, containing evidence‐based actions and outcomes to assist practitioners in decision‐making specific to pollinator habitat improvement that could be actionable in the near term.
Invasion of a non‐native forb reduces flammability in a fire‐dependent ecosystem
Authors: Barnes Alexander G. , Kane Jeffrey M. , McKenzie David A. , Koerner Brenda A. 
Published: March 2022

AbstractFire and grazing are two of the most common global disturbances that maintain and promote many grassland ecosystems worldwide. The presence of non‐native, invasive plant species can alter fire regimes through changes in fuel properties that affect native vegetation in many ecosystems and are a leading threat to biodiversity and ecosystem function. Sericea lespedeza (Lespedeza cuneata), a non‐native, invasive forb frequently present in many North American tallgrass prairies, may reduce flammability by altering the fuel bed moisture and structural characteristics to reduce fire in this fire‐dependent ecosystem. The goal of this research was to examine the influence of sericea lespedeza on fuel bed structure, moisture, and flammability compared to native grassland fuels. Fuel bed burning trials, conducted in a controlled laboratory setting, tested for the effect of fuel load mass of native grass and sericea lespedeza litter, proportion of sericea fuel load, and fuel moisture content on flammability metrics. Regardless of moisture content, sericea lespedeza reduced flammability and reduced maximum fire temperatures by as much as 500°C. Sericea lespedeza poses a major threat to North American tallgrass prairies by decreasing flammability of fuel beds through increased fuel bed density and moisture retention.
Forest structure and seasonally inundated grassland shape tropical mammal communities under moderate disturbance
Authors: Masseloux Juliana , Le Quy Tan , Burr Jessica , Gerber Brian D. 
Published: March 2022

AbstractTropical biodiversity is threatened globally by anthropogenic disturbances, particularly forest degradation and overhunting. Where large mammals have been extirpated, smaller bodied “mesomammals” may play an important ecological role (e.g., as seed dispersers). However, these species are disproportionally affected by overhunting for wildlife trade markets and are routinely understudied as they tend to be rare, cryptic, and nocturnal. Few studies have examined spatiotemporal responses to anthropogenic disturbance by mesomammals at the community level, which may identify imbalances within an ecosystem that could threaten species persistence. We deployed camera traps throughout Cat Tien National Park (i.e., Nam Cat Tien area), southern Vietnam, to (1) identify long‐term changes in terrestrial mesomammal richness and (2) evaluate the effects of forest structure and anthropogenic disturbance on an 18‐species mesomammal community within a historically disturbed tropical forest using hierarchical Bayesian community occupancy models. We found that site occupancy was driven by the interaction between distance to seasonally inundated grassland and absolute forest cover (basal area per hectare). This may be due to the combination of intact forest benefits (refuge from predators and hunters, denning sites) and early successional grassland resources (forage quality), as well as high levels of tolerance for disturbed forest among the largely generalist mesomammal community of Nam Cat Tien. We found no negative effects of current anthropogenic factors at the community level. However, we did find that four disturbance‐tolerant small carnivores have been extirpated since the 1990s and continued human presence in the park suggests that hunting and snaring remain an acute threat to native mesomammals. Without continued efforts to address the unsustainable harvest of wildlife, Southeast Asian's remaining mesomammals are at risk of extirpation despite resilience to moderate levels of disturbance.