bluuebunny/crossref_metadata_2025_split huggingface dataset:
Microplastics in sediments of the Pantanal Wetlands, Brazil
Authors: Camargo Alan Lacerda Gomes , Girard Pierre , Sanz-Lazaro Carlos , Silva Andressa Carla Moreschi , de Faria Érika , Figueiredo Bruno Renaly Souza , Caixeta Danila Soares , Blettler Martin C. M. 
Published: October 2022

Microplastics (&lt;5 mm) can have negative and deleterious environmental effects. However, the scarce information on the levels of microplastics and the factors underlying their input in wetlands, limits the understating of the vulnerability of these ecosystems to microplastics. To contribute closing this important information gap, the concentration (items/m−2), size and the variables related to the distribution of microplastics in fluvial sediments of the Cuiabá River, a tributary of the Pantanal, the world largest flooded Savanna and a UNESCO World Heritage were investigated. The mean microplastic level was 576.8 ± 577.8 items/m−2 of sediments which were mainly fragments (309.0 ± 319.6 items/m−2) and fibers (267.8 ± 339.9 items/m−2). The maximum level was 1938.8 items/m−2 found in the urban stretch of the sister cities of Cuiabá and Várzea Grande, the largest urban agglomeration in the study area. Unexpectedly, the composition of the microplastic with highest average level (240.7 ± 310.4 items/m−2), a blue synthetic fiber, could not be unequivocally determined by RAMAN spectrometry. Its complex composition includes Pb, Li and Nb, suggesting it may derive from electronic waste. Polypropylene (159.2 ± 133.4 items/m−2) and Polyvinyl Chloride (104.6 ± 217.2 items/m−2) were the second and third polymers with higher average levels. The average size of microplastics particles in sampling sites ranged from 0.18 mm to 1.74 mm. Microplastic concentration was positively related to urban areas. Similarly, microplastics particles size decreased with distance from urban areas. These results suggest that urban areas along the Cuiabá River, with poor waste management, are a major source of microplastic pollution in the Pantanal floodplain and that electronic waste might contribute significantly to this contamination. This study highlights the importance of adequate waste management in cities to limit microplastic contamination in areas of ecological importance, such as the Pantanal.
Recent methods in the production of activated carbon from date palm residues for the adsorption of textile dyes: A review
Authors: Alharbi Hattan A. , Hameed Bassim H. , Alotaibi Khaled D. , Al-Oud Saud S. , Al-Modaihsh Abdullah S. 
Published: October 2022

Textile dyes are organic compounds that can pose an environmental threat if not properly treated. They can cause many problems ranging from human health, ecosystem disturbances, and the reduction of the esthetic value of water bodies. The adsorption process using activated carbon (AC) has been proven to be effective in treating dyes in wastewater. However, the production of AC is limited by the non-renewables and relatively expensive precursor of coal. Date palm residues (DPRs) provide a good alternative for AC’s precursor due to their continuous supply, availability in a large amount, and having good physiochemical properties such as high oxygen element and fixed carbon. This study provides a review of the potential of date palm residues (DPRs) as AC in adsorbing textile dyes and the recent technological advances adopted by researchers in producing DPR-based AC. This review article focuses solely on DPR and not on other biomass waste. This study presents a background review on date palms, textile dyes, biochar, and AC, followed by production methods of AC. In the literature, DPR was carbonized between 250 and 400°C. The conventional heating process employed an activation temperature of 576.85–900°C for physical activation and a maximum of 800°C for physicochemical activation. Chemical agents used in the chemical activation of DPR included NaOH, KOH, ZnCl2, H3PO4, and CaCl2. The maximum surface area obtained for DPR-AC was 1,092.34 and 950 m2/g for physical and chemical activation, respectively. On the other hand, conditions used in microwave heating were between 540 and 700 W, which resulted in a surface area of 1,123 m2/g. Hydrothermal carbonization (HTC) utilized carbonization temperatures between 150 and 250°C with pressure between 1 and 5 MPa, thus resulting in a surface area between 125.50 and 139.50 m2/g. Isotherm and kinetic models employed in the literature are also discussed, together with the explanation of parameters accompanied by these models. The conversion of DPR into AC was noticed to be more efficient with the advancement of activation methods over the years.
The development of a novel signature based on the m6A RNA methylation regulator-related ceRNA network to predict prognosis and therapy response in sarcomas
Authors: Li Huling , Lin Dandan , Wang Xiaoyan , Feng Zhiwei , Zhang Jing , Wang Kai 
Published: October 2022

Background: N6 methyladenosine (m6A)-related noncoding RNAs (including lncRNAs and miRNAs) are closely related to the development of cancer. However, the gene signature and prognostic value of m6A regulators and m6A-associated RNAs in regulating sarcoma (SARC) development and progression remain largely unexplored. Therefore, further research is required.Methods: We obtained expression data for RNA sequencing (RNA-seq) and miRNAs of SARC from The Cancer Genome Atlas (TCGA) datasets. Correlation analysis and two target gene prediction databases (miRTarBase and LncBase v.2) were used to deduce m6A-related miRNAs and lncRNAs, and Cytoscape software was used to construct ceRNA-regulating networks. Based on univariate Cox regression and least absolute shrinkage and selection operator (LASSO) Cox regression analyses, an m6A-associated RNA risk signature (m6Ascore) model was established. Prognostic differences between subgroups were explored using Kaplan–Meier (KM) analysis. Risk score-related biological phenotypes were analyzed in terms of functional enrichment, tumor immune signature, and tumor mutation signature. Finally, potential immunotherapy features and drug sensitivity predictions for this model were also discussed.Results: A total of 16 miRNAs, 104 lncRNAs, and 11 mRNAs were incorporated into the ceRNA network. The risk score was obtained based on RP11-283I3.6, hsa-miR-455-3p, and CBLL1. Patients were divided into two risk groups using the risk score, with patients in the low-risk group having longer overall survival (OS) than those in the high-risk group. The receiver operating characteristic (ROC) curves indicated that risk characteristic performed well in predicting the prognosis of patients with SARC. In addition, lower m6Ascore was also positively correlated with the abundance of immune cells such as monocytes and mast cells activated, and several immune checkpoint genes were highly expressed in the low-m6Ascore group. According to our analysis, lower m6Ascore may lead to better immunotherapy response and OS outcomes. The risk signature was significantly associated with the chemosensitivity of SARC. Finally, a nomogram was constructed to predict the OS in patients with SARC. The concordance index (C-index) for the nomogram was 0.744 (95% CI: 0.707–0.784). The decision curve analysis (DCA), calibration plot, and ROC curve all showed that this nomogram had good predictive performance.Conclusion: This m6Ascore risk model based on m6A RNA methylation regulator-related RNAs may be promising for clinical prediction of prognosis and might contain potential biomarkers for treatment response prediction for SARC patients.
A genomic and transcriptomic study toward breast cancer
Authors: Wang Shan , Shang Pei , Yao Guangyu , Ye Changsheng , Chen Lujia , Hu Xiaolei 
Published: October 2022

Background: Breast carcinoma is well recognized to be having the highest global occurrence rate among all cancers, being the leading cause of cancer mortality in females. The aim of this study was to elucidate breast cancer at the genomic and transcriptomic levels in different subtypes so that we can develop more personalized treatments and precision medicine to obtain better outcomes.Method: In this study, an expression profiling dataset downloaded from the Gene Expression Omnibus database, GSE45827, was re-analyzed to compare the expression profiles of breast cancer samples in the different subtypes. Using the GEO2R tool, different expression genes were identified. Using the STRING online tool, the protein–protein interaction networks were conducted. Using the Cytoscape software, we found modules, seed genes, and hub genes and performed pathway enrichment analysis. The Kaplan–Meier plotter was used to analyze the overall survival. MicroRNAs and transcription factors targeted different expression genes and were predicted by the Enrichr web server.Result: The analysis of these elements implied that the carcinogenesis and development of triple-negative breast cancer were the most important and complicated in breast carcinoma, occupying the most different expression genes, modules, seed genes, hub genes, and the most complex protein–protein interaction network and signal pathway. In addition, the luminal A subtype might occur in a completely different way from the other three subtypes as the pathways enriched in the luminal A subtype did not overlap with the others. We identified 16 hub genes that were related to good prognosis in triple-negative breast cancer. Moreover, SRSF1 was negatively correlated with overall survival in the Her2 subtype, while in the luminal A subtype, it showed the opposite relationship. Also, in the luminal B subtype, CCNB1 and KIF23 were associated with poor prognosis. Furthermore, new transcription factors and microRNAs were introduced to breast cancer which would shed light upon breast cancer in a new way and provide a novel therapeutic strategy.Conclusion: We preliminarily delved into the potentially comprehensive molecular mechanisms of breast cancer by creating a holistic view at the genomic and transcriptomic levels in different subtypes using computational tools. We also introduced new prognosis-related genes and novel therapeutic strategies and cast new light upon breast cancer.
Determinants of postpartum depression among mothers in Debre Tabor town, North-central, Ethiopia: Community-based unmatched case-control study
Authors: Dagnaw Fentaw Teshome , Addis Wondimnew Desalegn , Tesfa Desalegn , Desale Aragaw Tesfaw , Issa Nurayine Abubeker , Belachew Yismaw Yimam , Yitbarek Getachew Yideg , Belay Alebachew Taye , Chanie Ermias Sisay , Hailemeskel Habtamu Shimels 
Published: October 2022

BackgroundPostpartum depression (PPD) is a non-psychotic depressive disorder of variable severity, and it can begin as early as 2 weeks after delivery and can persist indefinitely if left untreated. In Ethiopia, the prevalence of postpartum depression is high. There is a dearth of literature to determine factors associated with postpartum depression in Ethiopia, specifically in the study area.ObjectiveThis study aimed to identify factors associated with postpartum depression among mothers in Debre Tabor Town, Northcentral Ethiopia.MethodA community-based unmatched case-control study was conducted among mothers who were living in Debre Tabor Town and fulfilled the inclusion criteria. Postpartum mothers were selected using a simple random sampling technique from the listed sampling frame at the health center. Then, the sample cases and controls were interviewed until the sample size was fulfilled by using a consecutive sampling method. The data were entered into the EPI data version 4.6 and then imported and analyzed using SPSS version 25. Descriptive statistics of different variables were done by cross-tabulation. Binary logistic regression was used to assess the determinant factors with the outcome variable. A P-value of &lt; 0.05 was considered to declare statistical significance.ResultsA total of 308 postnatal mothers living in Debre Tabor Town were included, with a 97.5% response rate. History of substance use in the previous 3 months (AOR: 6.47, 95% CI; 2.61, 15.74), current baby illness (AOR: 3.9, 95% CI; 1.5, 10.12), marital dissatisfaction (AOR: 2.41, 95% CI; 1.22, 4.75), unplanned current pregnancy (AOR: 3.46, 95% CI; 1.32, 9.12), and breastfeeding (AOR: 0.22, 95% CI; 0.09, 0.55) were independent factors that affected the occurrence of PPD.ConclusionThis study revealed that a recent history of substance use (in the past 3 months), current baby illness, marital satisfaction, unplanned current pregnancy, and breastfeeding were associated with postpartum depression. Healthcare providers working in maternal and child health clinics and health extension workers should give special attention to postpartum mothers who have had a history of substance use, current baby illness, unplanned pregnancy, non-breastfeeding mothers, and mothers with poor marital satisfaction.
Diagnostic accuracy of the European League against rheumatism/American College of Rheumatology-2019 versus the Systemic Lupus International Collaborating Clinics-2012 versus the ACR-1997 classification criteria in adult systemic lupus erythematosus: A systematic review and meta-analysis
Authors: Lu Wentian , Tian Fengmei , Ma Jinlu , Zhong Ying , Liu Zhichun , Xue Leixi 
Published: October 2022

AimTo evaluate the diagnostic performance of the American College of Rheumatology (ACR)-1997, the Systemic Lupus International Collaborating Clinics (SLICC)-2012, and the European League against Rheumatism (EULAR)/ACR-2019 classification criteria in adult patients with systemic lupus erythematosus (SLE).MethodsPubMed, Embase, Web of Science and Cochrane Library databases were searched for literature comparing the three classification criteria of ACR-1997, SLICC-2012 and EULAR/ACR-2019, which took clinical diagnosis as reference. Meta-analysis was used to evaluate and compare the sensitivity, specificity and diagnostic odds ratio of ACR-1997, SLICC-2012 and EULAR/ACR-2019. To assess the early diagnosis capability of the classification criteria, subgroups of patients with disease duration &lt; 3 years and &lt; 1 year were selected for comparison of sensitivity and specificity based on the inclusion of the original study. The sensitivity and specificity of each item in three sets of classification criteria were evaluated. In addition, the clinical and immunological characteristics of patients who did not meet the three classification criteria were compared.ResultsNine original studies were included in the analysis, including 6404 SLE patients and 3996 controls. Results showed that the diagnostic odds ratios (95% confidence interval) of the SLICC-2012 [136.35 (114.94, 161.75)] and EULAR/ACR-2019 [187.47 (158.00, 222.42)] were higher than those of the ACR-1997 [67.53 (58.75, 77.63)]. Compared with ACR-1997[(0.86 (0.82, 0.89)], SLICC-2012[(0.96 (0.93, 0.97)] and EULAR/ACR-2019[(0.95 (0.92, 0.97)] had higher sensitivity. The specificity of the three classification criteria was similar: ACR-1997, SLICC-2012, and EULAR/ACR-2019 were 0.93 (0.89, 0.95), 0.86 (0.79, 0.91), and 0.91 (0.85, 0.95), respectively. The sensitivity of SLICC-2012 and EULAR/ACR-2019 were higher than that of ACR-1997 in early-course subgroups. Patients who did not meet ACR-1997 had more hypocomplementemia, patients who did not meet SLICC-2012 had more cutaneous lupus and photosensitivity, and patients who did not meet EULAR/ACR-2019 had more cutaneous lupus and leucopenia.ConclusionsSLICC-2012 and EULAR/ACR-2019 have better diagnostic ability than the ACR-1997, and the sensitivity of the former two criteria is also higher than that of the latter; Moreover, the SLICC-2012 and EULAR/ACR-2019 for patients in the early stages of disease performed equally excellent.
Abdominal cocoon syndrome (idiopathic sclerosing encapsulating peritonitis): An extremely rare cause of small bowel obstruction—Two case reports and a review of literature
Authors: Alsadery Humood A. , Busbait Saleh , AlBlowi Abdulrahman , Alsawidan Morshed , AlBisher Hassan Mohammed , Alshammary Shadi 
Published: October 2022

IntroductionSclerosing encapsulating peritonitis (SEP) is a rare cause of intestinal obstruction in which the bowel and internal abdominal organs are wrapped with a fibrocollagenous cocoon-like encapsulating membrane [1,2]. SEP is divided into two entities: abdominal cocoons (AC), also known as idiopathic or primary sclerosing encapsulating peritonitis, which is of extremely rare type, and secondary sclerosing encapsulating peritonitis, which is the more common type.Case presentationTwo male patients from India, a 26 year old and a 36 year old, presented to our hospital complaining about abdominal pain associated with nausea and vomiting without any history of previous surgical interventions; the patients' vitals were stable. Preoperative diagnosis of abdominal cocoon was established by abdominal computed tomography. It showed multiple dilated fluid-filled small bowel loops in the center of the abdominal cavity with thin soft tissue, non-enhancing capsules encasing the small bowel loops with mesenteric congestion involving small and large bowel loops. Both patients underwent complete surgical excision of the sac without intraoperative complications. Patients had a smooth postoperative hospital course and were discharged home in good conditions.ConclusionPatients with abdominal cocoons have a non-specific clinical presentation of intestinal obstruction. A high index of clinical suspicion in combination with the appropriate radiological investigation will increase the chance of preoperative detection of the abdominal cocoon. In patients with complete bowel obstruction, complete excision of the peritoneal sac is the standard of care.
Physical activity moderates the association between white matter hyperintensity burden and cognitive change
Authors: Song Suhang , Gaynor Alexandra M. , Gazes Yunglin , Lee Seonjoo , Xu Qianhui , Habeck Christian , Stern Yaakov , Gu Yian 
Published: October 2022

ObjectiveGreater physical activity (PA) could delay cognitive decline, yet the underlying mechanisms remain unclear. White matter hyperintensity (WMH) burden is one of the key brain pathologies that have been shown to predict faster cognitive decline at a late age. One possible pathway is that PA may help maintain cognition by mitigating the detrimental effects of brain pathologies, like WMH, on cognitive change. This study aims to examine whether PA moderates the association between WMH burden and cognitive change.Materials and methodsThis population-based longitudinal study included 198 dementia-free adults aged 20–80 years. Leisure-time physical activity (LTPA) was assessed by a self-reported questionnaire. Occupational physical activity (OPA) was a factor score measuring the physical demands of each job. Total physical activity (TPA) was operationalized as the average of z-scores of LTPA and OPA. Outcome variables included 5-year changes in global cognition and in four reference abilities (fluid reasoning, processing speed, memory, and vocabulary). Multivariable linear regression models were used to estimate the moderation effect of PA on the association between white matter hyperintensities and cognitive change, adjusting for age, sex, education, and baseline cognition.ResultsOver approximately 5 years, global cognition (p &lt; 0.001), reasoning (p &lt; 0.001), speed (p &lt; 0.001), and memory (p &lt; 0.05) scores declined, and vocabulary (p &lt; 0.001) increased. Higher WMH burden was correlated with more decline in global cognition (Spearman’s rho = –0.229, p = 0.001), reasoning (rho = –0.402, p &lt; 0.001), and speed (rho = –0.319, p &lt; 0.001), and less increase in vocabulary (rho = –0.316, p &lt; 0.001). Greater TPA attenuated the association between WMH burden and changes in reasoning (βTPA^*WMH = 0.029, 95% CI = 0.006–0.052, p = 0.013), speed (βTPA^*WMH = 0.035, 95% CI = –0.004–0.065, p = 0.028), and vocabulary (βTPA^*WMH = 0.034, 95% CI = 0.004–0.065, p = 0.029). OPA seemed to be the factor that exerted a stronger moderation on the relationship between WMH burden and cognitive change.ConclusionPhysical activity may help maintain reasoning, speed, and vocabulary abilities in face of WMH burden. The cognitive reserve potential of PA warrants further examination.
No change in interictal C-reactive protein levels in individuals with episodic and chronic migraine: A case-control study and literature review
Authors: Park Chae Gyu , Lee Sue Hyun , Chu Min Kyung 
Published: October 2022

ObjectivesThe levels of some migraine biomarkers differ between episodic migraine (EM) and chronic migraine (CM), but information on C-reactive protein (CRP) levels in EM and CM is conflicting. Thus, this study aimed to evaluate CRP levels in participants with EM and CM in comparison to those in healthy controls.MethodsPlasma CRP levels were evaluated by high-sensitivity CRP tests in female participants with EM (n = 174) and CM (n = 191) and healthy controls (n = 50).ResultsThe results showed no significant difference in CRP levels among the EM, CM, and control groups (median and interquartile range, 0.40 [0.15–0.70] mg/L vs. 0.40 [0.15–1.00] mg/L vs. 0.15 [0.15–0.90] mg/L, p = 0.991). The ratio of individuals with elevated CRP levels (&gt;3.0 mg/L) did not significantly differ among the EM, CM, and control groups (3.4% [6/174] vs. 2.1% [4/191] vs. 0.0% [0/50], p = 0.876). Multivariable regression analyses revealed that CRP levels were not significantly associated with headache frequency per month (β = −0.076, p = 0.238), the severity of anxiety (Generalized Anxiety Disorder-7 score, β = 0.143, p = 0.886), and depression (Patient Health Questionnaire-9 score, β = 0.143, p = 0.886). Further, CRP levels did not significantly differ according to clinical characteristics, fibromyalgia, medication overuse, preventive treatment, and classes of preventive treatment medications. Among participants with a body mass index ≥25 kg/m2, the CRP levels in EM (n = 41) and CM (n = 17) were numerically higher than those in the control (n = 6) (1.30 [0.28–4.25] mg/L vs. 1.10 [0.50–3.15] mg/L vs. 0.40 [0.15–0.83] mg/L, p = 0.249) but did not reach statistical significance.ConclusionsThe interictal CRP level is not likely to be a biomarker for EM or CM.
Accuracy of Y-scope, a newly developed portable abdominal impedance analyzer, for the assessment of abdominal visceral fat area
Authors: Yoon Ji Won , Sohn Minji , Moon Ji Hye , Lim Soo 
Published: October 2022

AimThis study was conducted to evaluate the accuracy of a newly developed multifrequency segmental (MFS) bioelectrical impedance analysis (BIA) method using an additional portable abdominal (PA) impedance analyzer, in the assessment of abdominal visceral fat area (VFA).Materials and methodsOne hundred healthy Korean subjects aged 19 years or over (43 men and 57 women) were recruited, and VFA was estimated by a conventional MFS-BIA machine and a new MFS-BIA machine with a PA-BIA device, indicating MFS-VFA and MFS&amp;PA-VFA, respectively. The accuracy of the VFA values was compared with those evaluated with CT at the level of the umbilicus (CT-VFA).ResultsThe mean age was 41 years and mean body mass index (BMI) was 24.4 kg/m2. The mean ± SD VFAs measured by CT, conventional MFS-BIA, and new MFS&amp;PA-BIA together were 93.4 ± 60.9, 92.7 ± 53.4, and 93.6 ± 55.4 cm2, respectively. Correlation coefficients comparing CT-VFA with MFS-VFA and MFS&amp;PA-VFA were 0.612 and 0.932, respectively (P &lt; 0.001 for both). The mean difference between CT-VFA and MFS&amp;PA-VFA was less affected by age, sex, and BMI compared with that between CT-VFA and MFS-VFA. Intraclass correlation coefficient (95% CI) between CT-VFA and MFS&amp;PA-VFA was also greater than that between CT-VFA and MFS-VFA, 0.96 (0.95–0.98) vs. 0.76 (0.64–0.84), respectively.ConclusionIn this study, application of a newly developed MFS-BIA machine combined with a PA-BIA device significantly improved the correlation with CT-measured VFA without proportional error. This novel approach using advanced technology may be able to provide more reliable estimates of abdominal VFA.