bluuebunny/crossref_metadata_2025_split huggingface dataset:
Representation of Leaf‐to‐Canopy Radiative Transfer Processes Improves Simulation of Far‐Red Solar‐Induced Chlorophyll Fluorescence in the Community Land Model Version 5
Authors: Li Rong , Lombardozzi Danica , Shi Mingjie , Frankenberg Christian , Parazoo Nicholas C. , Köhler Philipp , Yi Koong , Guan Kaiyu , Yang Xi 
Published: February 2022

AbstractRecent advances in satellite observations of solar‐induced chlorophyll fluorescence (SIF) provide a new opportunity to constrain the simulation of terrestrial gross primary productivity (GPP). Accurate representation of the processes driving SIF emission and its radiative transfer to remote sensing sensors is an essential prerequisite for data assimilation. Recently, SIF simulations have been incorporated into several land surface models, but the scaling of SIF from leaf‐level to canopy‐level is usually not well‐represented. Here, we incorporate the simulation of far‐red SIF observed at nadir into the Community Land Model version 5 (CLM5). Leaf‐level fluorescence yield was simulated by a parametric simplification of the Soil Canopy‐Observation of Photosynthesis and Energy fluxes model (SCOPE). And an efficient and accurate method based on escape probability is developed to scale SIF from leaf‐level to top‐of‐canopy while taking clumping and the radiative transfer processes into account. SIF simulated by CLM5 and SCOPE agreed well at sites except one in needleleaf forest (R2 > 0.91, root‐mean‐square error <0.19 W⋅m−2⋅sr−1⋅μm−1), and captured the day‐to‐day variation of tower‐measured SIF at temperate forest sites (R2 > 0.68). At the global scale, simulated SIF generally captured the spatial and seasonal patterns of satellite‐observed SIF. Factors including the fluorescence emission model, clumping, bidirectional effect, and leaf optical properties had considerable impacts on SIF simulation, and the discrepancies between simulate d and observed SIF varied with plant functional type. By improving the representation of radiative transfer for SIF simulation, our model allows better comparisons between simulated and observed SIF toward constraining GPP simulations.
Dynamic network impairments underlie cognitive fluctuations in Lewy body dementia
Authors: Matar Elie , Ehgoetz Martens Kaylena A. , Phillips Joseph R. , Wainstein Gabriel , Halliday Glenda M. , Lewis Simon J. G. , Shine James M. 
Published: February 2022

AbstractCognitive fluctuations are a characteristic and distressing disturbance of attention and consciousness seen in patients with Dementia with Lewy bodies and Parkinson’s disease dementia. It has been proposed that fluctuations result from disruption of key neuromodulatory systems supporting states of attention and wakefulness which are normally characterised by temporally variable and highly integrated functional network architectures. In this study, patients with DLB (n = 25) and age-matched controls (n = 49) were assessed using dynamic resting state fMRI. A dynamic network signature of reduced temporal variability and integration was identified in DLB patients compared to controls. Reduced temporal variability correlated significantly with fluctuation-related measures using a sustained attention task. A less integrated (more segregated) functional network architecture was seen in DLB patients compared to the control group, with regions of reduced integration observed across dorsal and ventral attention, sensorimotor, visual, cingulo-opercular and cingulo-parietal networks. Reduced network integration correlated positively with subjective and objective measures of fluctuations. Regions of reduced integration and unstable regional assignments significantly matched areas of expression of specific classes of noradrenergic and cholinergic receptors across the cerebral cortex. Correlating topological measures with maps of neurotransmitter/neuromodulator receptor gene expression, we found that regions of reduced integration and unstable modular assignments correlated significantly with the pattern of expression of subclasses of noradrenergic and cholinergic receptors across the cerebral cortex. Altogether, these findings demonstrate that cognitive fluctuations are associated with an imaging signature of dynamic network impairment linked to specific neurotransmitters/neuromodulators within the ascending arousal system, highlighting novel potential diagnostic and therapeutic approaches for this troubling symptom.
BCG-induced trained immunity enhances acellular pertussis vaccination responses in an explorative randomized clinical trial
Authors: Gillard Joshua , Blok Bastiaan A. , Garza Daniel R. , Venkatasubramanian Prashanna Balaji , Simonetti Elles , Eleveld Marc J. , Berbers Guy A. M. , van Gageldonk Pieter G. M. , Joosten Irma , de Groot Ronald , de Bree L. Charlotte J. , van Crevel Reinout , de Jonge Marien I. , Huynen Martijn A. , Netea Mihai G. , Diavatopoulos Dimitri A. 
Published: February 2022

AbstractAcellular pertussis (aP) booster vaccines are central to pertussis immunization programs, although their effectiveness varies. The Bacille Calmette-Guérin (BCG) vaccine is a prototype inducer of trained immunity, which enhances immune responses to subsequent infections or vaccinations. While previous clinical studies have demonstrated that trained immunity can protect against heterologous infections, its effect on aP vaccines in humans is unknown. We conducted a clinical study in order to determine the immunological effects of trained immunity on pertussis vaccination. Healthy female volunteers were randomly assigned to either receive BCG followed by a booster dose of tetanus-diphteria-pertussis inactivated polio vaccine (Tdap-IPV) 3 months later (BCG-trained), BCG + Tdap-IPV concurrently, or Tdap-IPV followed by BCG 3 months later. Primary outcomes were pertussis-specific humoral, T- and B-cell responses and were quantified at baseline of Tdap-IPV vaccination and 2 weeks thereafter. As a secondary outcome in the BCG-trained cohort, ex vivo leukocyte responses were measured in response to unrelated stimuli before and after BCG vaccination. BCG vaccination 3 months prior to, but not concurrent with, Tdap-IPV improves pertussis-specific Th1-cell and humoral responses, and also increases total memory B cell responses. These responses were correlated with enhanced IL-6 and IL-1β production at the baseline of Tdap-IPV vaccination in the BCG-trained cohort. Our study demonstrates that prior BCG vaccination potentiates immune responses to pertussis vaccines and that biomarkers of trained immunity are the most reliable correlates of those responses.
The significance of ErbB2/3 in the conversion of induced pluripotent stem cells into cancer stem cells
Authors: Hassan Ghmkin , Zahra Maram H. , Seno Akimasa , Seno Masaharu 
Published: February 2022

AbstractCancer stem cells (CSCs) are suggested to be responsible for drug resistance and aggressive phenotypes of tumors. Mechanisms of CSC induction are still under investigation. Our lab has established a novel method to generate CSCs from iPSCs under a cancerous microenvironment mimicked by the conditioned medium (CM) of cancer-derived cells. Here, we analyzed the transcriptome of CSCs, which were converted from iPSCs with CM from pancreatic ductal adenocarcinoma cells. The differentially expressed genes were identified and used to explore pathway enrichment. From the comparison of the CSCs with iPSCs, genes with elevated expression were related to the ErbB2/3 signaling pathway. Inhibition of either ErbB2 with lapatinib as a tyrosine kinase inhibitor or ErbB3 with TX1-85-1 or siRNAs arrested cell proliferation, inhibited the in vitro tumorigenicity, and lead to loss of stemness in the converting cells. The self-renewal and tube formation abilities of cells were also abolished while CD24 and Oct3/4 levels were reduced, and the MAPK pathway was overactivated. This study shows a potential involvement of the ErbB2/ErbB3 pathway in CSC generation and could lead to new insight into the mechanism of tumorigenesis and the way of cancer prevention.
Morpho-physiological adaptations of Leptocylindrus aporus and L. hargravesii to phosphate limitation in the northern Adriatic
Authors: Kužat Nataša , Marić Pfannkuchen Daniela , Smodlaka Tanković Mirta , Baričević Ana , Ivančić Ingrid , Vrana Ivna , Gašparović Blaženka , Pfannkuchen Martin 
Published: February 2022

AbstractThe northern Adriatic is highly productive and shallow area characterized by numerous spatio-temporal gradients (e.g. nutrients, salinity, temperature). It is strongly influenced by numerous freshwater inputs, mainly from Po river. Its current systems as well as Po river, generates gradients of phosphate availability with an expressed N/P imbalance and phosphate limitation. A number of recent studies characterized these gradients as major factors affecting abundance and composition of microphytoplankton communities. Focus of this study is on two Leptocylindrus species, Leptocylindrus aporus (F.W. French & Hargraves) D. Nanjappa & A. Zingone 2013 and Leptocylindrus hargravesii D. Nanjappa & A. Zingone 2013. Species belonging to Leptocylindrus genus are frequently observed and have high abundances and also high contributions to the microphytoplankton community in this area. We focused on their morphological and physiological responses to phosphate limitation in situ and also performed in vitro experiments. In this study we report data on species specific growth rates under phosphorus (P) deplete and P rich conditions, localization and characteristics of alkaline phosphate activity, phosphate uptake rates as well as their morphological differences in P deplete versus P rich conditions. Our in vitro experiments showed that both Leptocylindrus species morphologically reacted similarly to phosphorus depletion and showed significantly elongated pervalvar axis in P depleted conditions if compared to P rich conditions. Also average chain lengths increased when in P depleted conditions. Two previously mentioned adaptations indicate their tendency to increase cellular surface areas available for alkaline phosphatase. Chlorophyll fluorescence of both species significantly decreased in P depleted medium. Although both species morphologically reacted similarly, our experiment demonstrated significant differences in physiological reactions to P depleted conditions.
Towards machine learning aided real-time range imaging in proton therapy
Authors: Lerendegui-Marco Jorge , Balibrea-Correa Javier , Babiano-Suárez Víctor , Ladarescu Ion , Domingo-Pardo César 
Published: February 2022

AbstractCompton imaging represents a promising technique for range verification in proton therapy treatments. In this work, we report on the advantageous aspects of the i-TED detector for proton-range monitoring, based on the results of the first Monte Carlo study of its applicability to this field. i-TED is an array of Compton cameras, that have been specifically designed for neutron-capture nuclear physics experiments, which are characterized by $$\gamma $$
γ
-ray energies spanning up to 5–6 MeV, rather low $$\gamma $$
γ
-ray emission yields and very intense neutron induced $$\gamma $$
γ
-ray backgrounds. Our developments to cope with these three aspects are concomitant with those required in the field of hadron therapy, especially in terms of high efficiency for real-time monitoring, low sensitivity to neutron backgrounds and reliable performance at the high $$\gamma $$
γ
-ray energies. We find that signal-to-background ratios can be appreciably improved with i-TED thanks to its light-weight design and the low neutron-capture cross sections of its LaCl$$_{3}$$

3

crystals, when compared to other similar systems based on LYSO, CdZnTe or LaBr$$_{3}$$

3

. Its high time-resolution (CRT $$\sim $$
∼
500 ps) represents an additional advantage for background suppression when operated in pulsed HT mode. Each i-TED Compton module features two detection planes of very large LaCl$$_{3}$$

3

monolithic crystals, thereby achieving a high efficiency in coincidence of 0.2% for a point-like 1 MeV $$\gamma $$
γ
-ray source at 5 cm distance. This leads to sufficient statistics for reliable image reconstruction with an array of four i-TED detectors assuming clinical intensities of 10$$^{8}$$

8

protons per treatment point. The use of a two-plane design instead of three-planes has been preferred owing to the higher attainable efficiency for double time-coincidences than for threefold events. The loss of full-energy events for high energy $$\gamma $$
γ
-rays is compensated by means of machine-learning based algorithms, which allow one to enhance the signal-to-total ratio up to a factor of 2.
Low voltage optical fiber positioner robot based on minimum inductance hollow cup motors
Authors: Guo Shaoxiong , Zhai Chao , Bi Songlin 
Published: February 2022

AbstractWith the further transformation of The Large Sky Area Multi-Object Fiber Spectroscopic Telescope, the new generation of fiber positioner robot chooses a 4 mm hollow cup motor with minimum phase inductance. Because the load of the fiber positioner robot is constant and the inertia of the motor is very small, an open loop positioning control method based on Space Vector Pulse Width Modulation is proposed, and the specific open loop parameters are directly tuned by relevant experimental strategies. The critical factors of the open loop driving mode are discussed in detail from four aspects: subdivision, fundamental frequency, wave generation mode and peak current. Based on the actual fiber positioner robot, the hardware driver and assessment platform are built. The positioning tests show that the method proposed is practical and effective, and meets the precision positioning demand of the new generation optical fiber positioner robot.
Solubilization of cuprous oxide in water using biosurfactant extracts from corn steep liquor: a comparative study
Authors: López-Prieto A. , Moldes A. B. , Cruz J. M. , Pérez-Cid B. 
Published: February 2022

AbstractIn this work the chemical characterization (elemental analysis and the content of phospholipids) and surface-active properties of two biosurfactants (BS) extracted with both chloroform or ethyl acetate from corn steep liquor were compared. The phospholipids content for the BS extracted with chloroform (BS1) was considerably higher (8.15%) than that obtained for the BS extracted with ethyl acetate (BS2), 0.11%. When comparing the FTIR spectra of the two BS studied in this work with the spectrum of the commercial surfactant lecithin, a greater similarity (75%) was observed with the spectrum of the BS1. The biosurfactant extract (BS2) provided the most favorable conditions for the solubilization of cuprous oxide (Cu-Ox) in water (12.54% of copper dissolved), in comparison with BS1. The results achieved were considerably better than those obtained with chemical surfactants (Tween 80, SDS and CTAB) on solubilizing Cu-Ox, resulting in the latter cases on percentages of Cu dissolved always lower than 0.21%. In addition, a factorial design was performed obtaining the optimum conditions to solubilize Cu-Ox, where the maximum water solubility of Cu-Ox (13.17%) was achieved using 3.93 g/L of BS2 with a contact time of 19.86 min and using a concentration of Cu-Ox of 1.96 g/L. Thus, the BS2 extract could have a promising future as solubilizing agent in the formulation of more sustainable Cu-Ox based pesticides. Moreover, it was confirmed that the presence of phospholipids prevents the solubilization of copper-based pesticides in water.
Onset of Late Cretaceous diversification in Europe’s freshwater gastropod fauna links to global climatic and biotic events
Authors: Neubauer Thomas A. , Harzhauser Mathias 
Published: February 2022

AbstractThe Mesozoic rise of the European freshwater gastropod fauna is still poorly understood. Compared to the well documented Cenozoic history, little is known about the patterns and processes underlying the early diversification preceding their extinction crisis at the K–Pg boundary. We assess what is probably a first pulse of diversification of the Cenozoic-type fauna in the Late Cretaceous along with the potential abiotic and biotic controls for shifts in species diversification. We find strong support that the increase in the speciation rate in the Santonian (~ 85 Myr ago) is linked to a global sea level rise, which caused extensive flooding of continental areas and the formation of vast brackish-water ecosystems. The following decline of the speciation rate coincides with a rise in diversity and reflects increasing interspecific competition. The peak in the speciation rate postdates the Cenomanian–Turonian Thermal Maximum, which probably limited the potential for diversification among freshwater gastropods due to ecological constraints. The peak coincides moreover with the end phase of the Cretaceous Terrestrial Revolution, which sparked the radiation of angiosperms. The expansion and diversification of flowering plants, being an important food source for freshwater gastropods today, could have formed a necessary basis for gastropod diversification.
Settling moths are the vital component of pollination in Himalayan ecosystem of North-East India, pollen transfer network approach revealed
Authors: Singh Navneet , Lenka Rajesh , Chatterjee Pallab , Mitra Dipayan 
Published: February 2022

AbstractMajority of the pollination related studies are based on the diurnal pollinators, and the nocturnal pollinators received less scientific attention. We reveal the significance of settling moths in pollination of angiosperm families in Himalayan ecosystem of North-East India. The refined and novel method of pollen extraction from the proboscides provides a more robust assessment of the pollen carrying capacity. The study is based on one of the largest data sets (140 pollen transporter moth species (PTMS)), with interpretation based on seasonal as well as altitudinal data. In the present study about 65% moths (91 species) carried sufficient quantities of pollen grains to be considered as potential pollinators (PPMS). Teliphasa sp. (Crambidae) and Cuculia sp. (Noctuidae) are found to carry the highest quantity of pollen. We found pollen grains of 21 plant families and the abundant pollen are from Betulaceae, Fabaceae, Rosaceae and Ericaceae. Species composition of PTMS and PPMS in pre-monsoon, monsoon, and post-monsoon revealed the dominance of Geometridae. Maximum diversity of PTMS and PPMS is found from 2000 to 2500 m altitude. The nocturnal pollen transfer network matrices exhibited high degree of selectivity (H2ʹ = 0.86).
Non-parametric multiple inputs prediction model for magnetic field dependent complex modulus of magnetorheological elastomer
Authors: Saharuddin Kasma Diana , Ariff Mohd Hatta Mohammed , Bahiuddin Irfan , Ubaidillah Ubaidillah , Mazlan Saiful Amri , Aziz Siti Aishah Abdul , Nazmi Nurhazimah , Fatah Abdul Yasser Abdul , Shapiai Mohd Ibrahim 
Published: February 2022

AbstractThis study introduces a novel platform to predict complex modulus variables as a function of the applied magnetic field and other imperative variables using machine learning. The complex modulus prediction of magnetorheological (MR) elastomers is a challenging process, attributable to the material’s highly nonlinear nature. This problem becomes apparent when considering various possible fabrication parameters. Furthermore, traditional parametric modeling methods are limited when applied to solve larger-scale cases involving large databases. Consequently, the application of non-parametric modeling such as machine learning has gained increasing attraction in recent years. Therefore, this work proposes a data-driven approach for predicting multiple input-dependent complex moduli using feedforward neural networks. Besides excitation frequency and magnetic flux density as operating conditions, the inputs consider compositions and curing conditions represented by magnetic particle weight percentage and the curing magnetic field, respectively. Extreme learning machines and artificial neural networks were used to train the models. The simulation results obtained at various curing conditions and other inputs confirm that the predicted complex modulus has high accuracy with an R2 of about 0.997, as compared to the experimental results. Furthermore, the predicted complex modulus pattern and magnetorheological effect agree with the experimental data using both the learned and unlearned data.
Host-trailing satellite flight behaviour is associated with greater investment in peripheral visual sensory system in miltogrammine flies
Authors: Polidori Carlo , Piwczynski Marcin , Ronchetti Federico , Johnston Nikolas P. , Szpila Krzysztof 
Published: February 2022

AbstractInsect sensory systems are the subjects of different selective pressures that shape their morphology. In many species of the flesh fly subfamily Miltogramminae (Diptera: Sarcophagidae) that are kleptoparasitic on bees and wasps, females perch on objects close to the host nests and, once a returning host is detected, they follow it in flight at a fixed distance behind until reaching the nest. We hypothesized that such satellite (SAT) flight behaviour, which implies a finely coordinated trailing flight, is associated with an improved visual system, compared to species adopting other, non-satellite (NON-SAT) strategies. After looking at body size and common ancestry, we found that SAT species have a greater number of ommatidia and a greater eye surface area when compared to NON-SAT species. Ommatidium area is only affected by body size, suggesting that selection changes disproportionately (relative to body size variation) the number of ommatidia and as a consequence the eye area, instead of ommatidium size. SAT species also tend to have larger ocelli, but their role in host-finding was less clear. This suggests that SAT species may have a higher visual acuity by increasing ommatidia number, as well as better stability during flight and motion perception through larger ocelli. Interestingly, antennal length was significantly reduced in SAT species, and ommatidia number negatively correlated with antennal length. While this finding does not imply a selection pressure of improved antennal sensory system in species adopting NON-SAT strategies, it suggests an inverse resource (i.e. a single imaginal disc) allocation between eyes and antennae in this fly subfamily.