bluuebunny/crossref_metadata_2025_split huggingface dataset:
Incomplete recovery of bone strength and trabecular microarchitecture at the distal tibia 1 year after return from long duration spaceflight
Authors: Gabel Leigh , Liphardt Anna-Maria , Hulme Paul A. , Heer Martina , Zwart Sara R. , Sibonga Jean D. , Smith Scott M. , Boyd Steven K. 
Published: June 2022

AbstractDetermining the extent of bone recovery after prolonged spaceflight is important for understanding risks to astronaut long-term skeletal health. We examined bone strength, density, and microarchitecture in seventeen astronauts (14 males; mean 47 years) using high-resolution peripheral quantitative computed tomography (HR-pQCT; 61 μm). We imaged the tibia and radius before spaceflight, at return to Earth, and after 6- and 12-months recovery and assessed biomarkers of bone turnover and exercise. Twelve months after flight, group median tibia bone strength (F.Load), total, cortical, and trabecular bone mineral density (BMD), trabecular bone volume fraction and thickness remained − 0.9% to − 2.1% reduced compared with pre-flight (p ≤ 0.001). Astronauts on longer missions (> 6-months) had poorer bone recovery. For example, F.Load recovered by 12-months post-flight in astronauts on shorter (< 6-months; − 0.4% median deficit) but not longer (− 3.9%) missions. Similar disparities were noted for total, trabecular, and cortical BMD. Altogether, nine of 17 astronauts did not fully recover tibia total BMD after 12-months. Astronauts with incomplete recovery had higher biomarkers of bone turnover compared with astronauts whose bone recovered. Study findings suggest incomplete recovery of bone strength, density, and trabecular microarchitecture at the weight-bearing tibia, commensurate with a decade or more of terrestrial age-related bone loss.
A phase 1b study of andecaliximab in combination with S-1 plus platinum in Japanese patients with gastric adenocarcinoma
Authors: Ooki Akira , Satoh Taroh , Muro Kei , Takashima Atsuo , Kadowaki Shigenori , Sakai Daisuke , Ichimura Takashi , Mitani Seiichiro , Kudo Toshihiro , Chin Keisho , Kitano Shigehisa , Thai Dung , Zavodovskaya Marianna , Liu JieJane , Boku Narikazu , Yamaguchi Kensei 
Published: June 2022

AbstractAndecaliximab (ADX) is a monoclonal antibody that inhibits matrix metalloproteinase 9 (MMP9), an extracellular enzyme involved in matrix remodeling, tumor growth, and metastasis. In preclinical models, MMP9 inhibitors have been shown to enhance the cytotoxic effects of chemotherapeutic agents and to suppress distant metastasis. In this phase Ib, multicenter study, the safety and efficacy of ADX combined with S-1 plus cisplatin (SP) or S-1 plus oxaliplatin (SOX) as a first-line treatment were evaluated in Japanese patients with advanced gastric or gastroesophageal junction (GEJ) adenocarcinoma. ADX was administrated at a dose of 800 mg every 2 weeks for the SP cohort and 1200 mg every three weeks for the SOX cohort. As of December 2019, 16 patients were enrolled (six patients in the SP cohort and 10 patients in the SOX cohort). Peripheral sensory neuropathy (69%), anorexia (63%), nausea (56%), and decreased neutrophil counts (44%) were the most common adverse events (AEs). The grade 3 or higher AEs attributed to ADX were stomatitis and abnormal hepatic function (each one patient) in the SP cohort and decreased neutrophil counts (two patients) in the SOX cohort. The objective response rate in 11 patients with measurable target lesions was 73% (8/11), based on the investigator’s evaluation. Median progression-free survival was11.9 months (90% confidence interval, 5.6–16.6), and median overall survival was not reached. In conclusion, ADX combined with S-1 plus platinum demonstrated a manageable safety profile and promising clinical activity in the first-line treatment of patients with advanced gastric or GEJ adenocarcinoma.Clinical Trial Registration information: ClinicalTrials.gov Identifier: NCT02862535 (11/08/2016) and protocol ID: GS-US-296-1884.
Unplanned hemodialysis initiation and low geriatric nutritional risk index scores are associated with end-stage renal disease outcomes
Authors: Maenosono Ryoichi , Fukushima Tatsuo , Kobayashi Daisuke , Matsunaga Tomohisa , Yano Yusuke , Taniguchi Shunri , Fujiwara Yuya , Komura Kazumasa , Uehara Hirofumi , Kagitani Maki , Hirano Hajime , Inamoto Teruo , Nomi Hayahito , Azuma Haruhito 
Published: June 2022

AbstractPatients with end-stage renal disease (ESRD) have a low nutritional status and a high mortality risk. The geriatric nutritional risk index (GNRI) is a predictive marker of malnutrition. However, the association between unplanned hemodialysis (HD) and GNRI with mortality remains unclear. In total, 162 patients underwent HD at our hospital. They were divided into two groups: those with unplanned initiation with a central venous catheter (CVC; n = 62) and those with planned initiation with prepared vascular access (n = 100). There were no significant differences in sex, age, malignant tumor, hypertension, and vascular disease, while there were significant differences in the times from the first visit to HD initiation (zero vs. six times, p < 0.001) and days between the first visit and HD initiation (5 vs. 175 days, p < 0.001). The CVC insertion group had significantly lower GNRI scores at initiation (85.7 vs. 99.0, p < 0.001). The adjusted hazard ratios were 4.002 and 3.018 for the GNRI scores and frequency, respectively. The 3-year survival rate was significantly lower in the CVC + low GNRI group (p < 0.0001). The GNRI after 1 month was significantly inferior in the CVC insertion group. Inadequate general management due to late referral to the nephrology department is a risk factor for patients with ESRD.
Stressful life events and trajectories of depression symptoms in a U.S. military cohort
Authors: Sampson Laura , Cabral Howard J. , Rosellini Anthony J. , Gradus Jaimie L. , Cohen Gregory H. , Fink David S. , King Anthony P. , Liberzon Israel , Galea Sandro 
Published: June 2022

AbstractDepression is a common mental disorder that may comprise distinct, underlying symptom patterns over time. Associations between stressful life events throughout the civilian lifecourse—including during childhood—and adult depression have been documented in many populations, but are less commonly assessed in military samples. We identified different trajectories of depression symptoms across four years in a military cohort using latent class growth analysis, and investigated the relationship between these trajectories and two domains of civilian life experiences: childhood adversity (e.g., being mistreated during childhood) and more proximal stressful experiences (e.g., divorce). A four-group depression model was identified, including a symptom-free group (62%), an increasing symptom group (13%), a decreasing symptom group (16%), and a “chronic” symptom group (9%). Compared to the symptom-free group, soldiers with childhood adversity were more likely to be in the chronic depression, decreasing, and increasing symptom groups. Time-varying adult stressors had the largest effect on depression symptoms for the increasing symptom group compared to other groups, particularly in the last two years of follow-up. This study indicates the importance of considering events from throughout the lifecourse—not only those from deployment—when studying the mental health of servicemembers.
Direct observations of pure electron outflow in magnetic reconnection
Authors: Sakai K. , Moritaka T. , Morita T. , Tomita K. , Minami T. , Nishimoto T. , Egashira S. , Ota M. , Sakawa Y. , Ozaki N. , Kodama R. , Kojima T. , Takezaki T. , Yamazaki R. , Tanaka S. J. , Aihara K. , Koenig M. , Albertazzi B. , Mabey P. , Woolsey N. , Matsukiyo S. , Takabe H. , Hoshino M. , Kuramitsu Y. 
Published: June 2022

AbstractMagnetic reconnection is a universal process in space, astrophysical, and laboratory plasmas. It alters magnetic field topology and results in energy release to the plasma. Here we report the experimental results of a pure electron outflow in magnetic reconnection, which is not accompanied with ion flows. By controlling an applied magnetic field in a laser produced plasma, we have constructed an experiment that magnetizes the electrons but not the ions. This allows us to isolate the electron dynamics from the ions. Collective Thomson scattering measurements reveal the electron Alfvénic outflow without ion outflow. The resultant plasmoid and whistler waves are observed with the magnetic induction probe measurements. We observe the unique features of electron-scale magnetic reconnection simultaneously in laser produced plasmas, including global structures, local plasma parameters, magnetic field, and waves.
Deeper insights into long-term survival heterogeneity of pancreatic ductal adenocarcinoma (PDAC) patients using integrative individual- and group-level transcriptome network analyses
Authors: Bhardwaj Archana , Josse Claire , Van Daele Daniel , Poulet Christophe , Chavez Marcela , Struman Ingrid , Van Steen Kristel 
Published: June 2022

AbstractPancreatic ductal adenocarcinoma (PDAC) is categorized as the leading cause of cancer mortality worldwide. However, its predictive markers for long-term survival are not well known. It is interesting to delineate individual-specific perturbed genes when comparing long-term (LT) and short-term (ST) PDAC survivors and integrate individual- and group-based transcriptome profiling. Using a discovery cohort of 19 PDAC patients from CHU-Liège (Belgium), we first performed differential gene expression analysis comparing LT to ST survivor. Second, we adopted systems biology approaches to obtain clinically relevant gene modules. Third, we created individual-specific perturbation profiles. Furthermore, we used Degree-Aware disease gene prioritizing (DADA) method to develop PDAC disease modules; Network-based Integration of Multi-omics Data (NetICS) to integrate group-based and individual-specific perturbed genes in relation to PDAC LT survival. We identified 173 differentially expressed genes (DEGs) in ST and LT survivors and five modules (including 38 DEGs) showing associations to clinical traits. Validation of DEGs in the molecular lab suggested a role of REG4 and TSPAN8 in PDAC survival. Via NetICS and DADA, we identified various known oncogenes such as CUL1 and TGFB1. Our proposed analytic workflow shows the advantages of combining clinical and omics data as well as individual- and group-level transcriptome profiling.
Dimensional label learning contributes to the development of executive functions
Authors: Lowery Kara , Nikam Bhoomika , Buss Aaron T. 
Published: June 2022

AbstractA key to understanding how the brain develops is to understand how learning can change brain function. One index of learning that takes place in early childhood involves the comprehension and production of labels describing the shape and color features of objects, a process known as dimensional label learning (DLL). DLL requires integrating auditory and visual stimuli to form a system of mappings that link label representations (e.g. “red” and “color”) and visual feature representations (e.g. “red” and the hue red). Children gain expertise with these labels between the ages of 2 and 5 years, and at the same time they begin to demonstrate skills in using labels to guide cognitive function in other domains. For example, one of the hallmark measures of executive function development requires children to use verbally instructed rules to guide attention to visual dimensions. The broader impact of DLL, however, has not yet been explored. Here, we examine how the neural processes associated with the comprehension and production of labels for visual features predicts later performance on executive function tasks. Specifically, we show that left frontal cortex is activated during comprehension and production tasks at 33 months of age. Moreover, we find that neural activation in this region during label production at 33 months is associated with dimensional attention, but not spatial selective attention, at 45 months. These results shed new light on the role of label learning in developmental changes in brain and behavior. Moreover, these data suggest that dimensional label learning generalizes beyond the learned information to influence other aspects of cognition. We anticipate that these results may serve as a starting point for future work to implement label training as an intervention to influence later cognition.
How to correctly estimate the electric field in capacitively coupled systems for tissue engineering: a comparative study
Authors: Meneses João , Fernandes Sofia , Alves Nuno , Pascoal-Faria Paula , Miranda Pedro Cavaleiro 
Published: June 2022

AbstractCapacitively Coupled (CCoupled) electric fields are used to stimulate cell cultures in Tissue Engineering. Knowing the electric field (E-Field) magnitude in the culture medium is fundamental to establish a relationship between stimulus strength and cellular effects. We analysed eight CCoupled studies and sought to corroborate the reported estimates of the E-Field in the culture medium. First, we reviewed the basic physics underlying CCoupled stimulation and delineated three approaches to estimate the E-field. Using these approaches, we found that the reported values were overestimated in five studies, four of which were based on incorrect assumptions. In all studies, insufficient information was provided to reproduce the setup exactly. Creating electrical models of the experimental setup should improve the accuracy of the E-field estimates and enhance reproducibility. For this purpose, we developed a free open-source tool, the E-field Calculator for CCoupled systems, which is available for download from an internet hosting platform.
Phytogenic supplement containing menthol, carvacrol and carvone ameliorates gut microbiota and production performance of commercial layers
Authors: Bajagai Yadav S. , Petranyi Friedrich , J. Yu Sung , Lobo Edina , Batacan Romeo , Kayal Advait , Horyanto Darwin , Ren Xipeng , M. Whitton Maria , Stanley Dragana 
Published: June 2022

AbstractConsumer push towards open and free-range production systems makes biosecurity on farms challenging, leading to increased disease and animal welfare issues. Phytogenic products are increasingly becoming a viable alternative for the use of antibiotics in livestock production. Here we present a study of the effects of commercial phytogenic supplement containing menthol, carvacrol and carvone on intestinal microbiota of layer hens, microbial functional capacity, and intestinal morphology. A total of 40,000 pullets were randomly assigned to two sides of the experimental shed. Growth performance, mortality, egg production and egg quality parameters were recorded throughout the trial period (18–30 weeks of age). Microbial community was investigated using 16S amplicon sequencing and functional difference using metagenomic sequencing. Phytogen supplemented birds had lower mortality and number of dirty eggs, and their microbial communities showed reduced richness. Although phytogen showed the ability to control the range of poultry pathogens, its action was not restricted to pathogenic taxa, and it involved functional remodelling the intestinal community towards increased cofactor production, heterolactic fermentation and salvage and recycling of metabolites. The phytogen did not alter the antimicrobial resistance profile or the number of antibiotic resistance genes. The study indicates that phytogenic supplementation can mimic the action of antibiotics in altering the gut microbiota and be used as their alternative in industry-scale layer production.
Observations of boundary layer wind and turbulence of a landfalling tropical cyclone
Authors: Zhao Zhongkuo , Gao Ruiquan , Zhang Jun A. , Zhu Yong , Liu Chunxia , Chan P. W. , Wan Qilin 
Published: June 2022

AbstractThis study investigates the atmospheric boundary layer structure based on multiple-level tower observations with a height of 350 m during the landfall of Super Typhoon Mangkhut (2018). Results show a layer of log wind profile outside of the radius of maximum wind speed with a height of 100 m or larger. The log layer height increases with the wind speed. The height of the constant flux layer reaches ~ 300 m for 10-m wind speeds less than 13 m s−1 while this height decreases with the wind speed. Momentum fluxes and turbulent kinetic energy increase with the wind speed at all vertical levels. The drag coefficient and surface roughness length estimated at the tower location have values of 7.3 × 10–3 and 0.09 m, respectively, which are independent of wind speed. The estimated vertical eddy diffusivity and mixing length increase with height up to ~ 160 m and then slowly decrease with height. The vertical eddy diffusivity increases with the wind speed while the vertical mixing length has no dependence on the wind speed. Comparing our results with previous work indicates that the vertical eddy diffusivity is larger over land than over ocean at a given wind speed range.
Distributed multi-camera multi-target association for real-time tracking
Authors: Yang Senquan , Ding Fan , Li Pu , Hu Songxi 
Published: June 2022

AbstractTracking and associating different views of the same target across moving cameras is challenging as its appearance, pose and scale may vary greatly. Moreover, with multiple targets a management module is needed for new targets entering and old targets exiting the field of view of each camera. To address these challenges, we propose DMMA, a Distributed Multi-camera Multi-target Association for real-time tracking that employs a target management module coupled with a local data-structure containing the information on the targets. The target management module shares appearance and label information for each known target for inter-camera association. DMMA is designed as a distributed target association that allows a camera to join at any time, does not require cross-camera calibration, and can deal with target appearance and disappearance. The various parts of DMMA are validated using benchmark datasets and evaluation criteria. Moreover, we introduce a new mobile-camera dataset comprising six different scenes with moving cameras and objects, where DMMA achieves 92% MCTA on average. Experimental results show that the proposed tracker achieves a good association accuracy and speed trade-off by working at 32 frames per second (fps) with high definition (HD) videos.
Impaired aortic strain and distensibility by cardiac MRI in children with chronic kidney disease
Authors: Sobh Donia M. , Tawfik Ahmed M. , Batouty Nihal M. , Sobh Hoda M. , Hamdy Nashwa , Bakr Ashraf , Eid Riham , Awad Mohamed H. , Gadelhak Basma 
Published: June 2022

AbstractRenal disease is associated with increased arterial stiffness. The aim was to investigate the effect of renal disease on regional aortic strain and distensibility in children with chronic kidney disease (CKD) by cardiac magnetic resonance imaging (MRI). The study included 30 children with CKD on hemodialysis, and ten healthy control subjects. Using cardiac MRI, maximal and minimal aortic areas were measured in axial cine steady state free precision images at the ascending aorta, proximal descending, and aorta at diaphragm. Regional strain and distensibility were calculated using previously validated formulas. Second reader aortic areas measurements were used to assess inter-observer agreement. Ascending aorta strain was significantly reduced in patients (38.4 ± 17.4%) compared to the control group (56.1 ± 17%), p-value 0.011. Ascending Aorta distensibility was significantly reduced in patients (9.1 ± 4.4 [× 10−3 mm Hg−1]) compared to the control group (13.9 ± 4.9 [× 10−3 mm Hg−1]), p-value 0.006. Strain and distensibility were reduced in proximal descending aorta and aorta at diaphragm but did not reach statistical significance. Only ascending aorta strain and distensibility had significant correlations with clinical and cardiac MRI parameters. Inter-observer agreement for strain and distensibility was almost perfect or strong in the three aortic regions. Aortic strain and distensibility by cardiac MRI are important imaging biomarkers for initial clinical evaluation and follow up of children with CKD.
Spectral organ fingerprints for machine learning-based intraoperative tissue classification with hyperspectral imaging in a porcine model
Authors: Studier-Fischer Alexander , Seidlitz Silvia , Sellner Jan , Özdemir Berkin , Wiesenfarth Manuel , Ayala Leonardo , Odenthal Jan , Knödler Samuel , Kowalewski Karl Friedrich , Haney Caelan Max , Camplisson Isabella , Dietrich Maximilian , Schmidt Karsten , Salg Gabriel Alexander , Kenngott Hannes Götz , Adler Tim Julian , Schreck Nicholas , Kopp-Schneider Annette , Maier-Hein Klaus , Maier-Hein Lena , Müller-Stich Beat Peter , Nickel Felix 
Published: June 2022

AbstractVisual discrimination of tissue during surgery can be challenging since different tissues appear similar to the human eye. Hyperspectral imaging (HSI) removes this limitation by associating each pixel with high-dimensional spectral information. While previous work has shown its general potential to discriminate tissue, clinical translation has been limited due to the method’s current lack of robustness and generalizability. Specifically, the scientific community is lacking a comprehensive spectral tissue atlas, and it is unknown whether variability in spectral reflectance is primarily explained by tissue type rather than the recorded individual or specific acquisition conditions. The contribution of this work is threefold: (1) Based on an annotated medical HSI data set (9059 images from 46 pigs), we present a tissue atlas featuring spectral fingerprints of 20 different porcine organs and tissue types. (2) Using the principle of mixed model analysis, we show that the greatest source of variability related to HSI images is the organ under observation. (3) We show that HSI-based fully-automatic tissue differentiation of 20 organ classes with deep neural networks is possible with high accuracy (> 95%). We conclude from our study that automatic tissue discrimination based on HSI data is feasible and could thus aid in intraoperative decisionmaking and pave the way for context-aware computer-assisted surgery systems and autonomous robotics.
Accumulation of trace element content in the lungs of Sao Paulo city residents and its correlation to lifetime exposure to air pollution
Authors: dos Santos Nathália Villa , Vieira Carolina Leticia Zilli , Saldiva Paulo Hilario Nascimento , De André Carmen Diva Saldiva , Mazzilli Barbara Paci , de Fátima Andrade Maria , Saueia Catia Heloisa , Saiki Mitiko , Veras Mariana Matera , Koutrakis Petros 
Published: June 2022

AbstractHeavy metals are natural and essential elements of the environment and living beings, produced from natural (e.g. volcanic activity and cosmic ray-induced spallation) and anthropogenic processes (e.g. industrial and fossil fuel combustion). High-concentrations of heavy metals and radionuclides are also originated from anthropogenic activities in urban and industrial areas. In this preliminary study, we analyzed the levels of heavy metals and Polonium-210 (210Po) in lung tissues in autopsies from residents of the city of Sao Paulo, SP, Brazil. In order to identify the link among sources of the heavy metals in lungs, factor analysis was performed. Of the first four factors, which explain 66% of the total variability, three were associated with vehicular sources. The fitting of a regression model with210Po as the response variable and with the four factors as explanatory variables, controlling for age, sex and tobacco, showed a significant association between the concentration of polonium and the first factor that is generated by catalysts and brakes (coefficient = 0.90, standard error = 0.33, p = 0.016). Our findings suggest an association between traffic-related trace metals and210Po in lung autopsies.