bluuebunny/crossref_metadata_2025_split huggingface dataset:
Gender and Geographic Origin as Determinants of Manuscript Publication Outcomes: JBMR® Bibliometric Analysis from 2017 to 2019
Authors: Rivadeneira Fernando , Loder Randall T. , McGuire Anthony C. , Chitwood Joseph R. , Duffy Katie , Civitelli Roberto , Kacena Melissa A. , Westendorf Jennifer J. 
Published: September 2022

Abstract
The Journal of Bone and Mineral Research (JBMR®), the flagship journal of the American Society for Bone and Mineral Research (ASBMR), enjoys a premiere position in its field and has a global reach. The journal uses a single-blind peer-review process whereby three editors are typically involved in assessing each submission for publication, in addition to external reviewers. Although emphasizing fairness, rigor, and transparency, this process is not immune to the influence of unconscious biases. The gender and geographic diversity of JBMR® authors, editors, and reviewers has increased over the last three decades, but whether such diversity has affected peer-review outcomes is unknown. We analyzed manuscript acceptance rates based on the gender and geographic origin of authors, reviewers, and Associate Editors. The analysis included 1662 original research articles submitted to JBMR® from September 2017 through December 2019. Gender was assigned using probabilities from an online tool and manually validated through internet searches. Predictor variables of manuscript outcome were determined with multivariate logistic regression analysis. The acceptance rate was highest when the first and last authors were of different genders, and lowest when both authors were men. Reviewer gender did not influence the outcome regardless of the genders of the first and last authors. Associate Editors from all geographical regions tended to select reviewers from their same region. The acceptance rate was highest when the Associate Editor was from Europe. Manuscripts with authors from North America and Australia/New Zealand had greater overall odds of acceptance than those from Europe and Asia. Manuscripts reviewed only by Editorial Board (EB) members had a lower acceptance rate than those refereed by non-EB reviewers or a mix of EB and non-EB reviewers. Overall, the geographical origin of authors, reviewers, and editors, as well as reviewers' EB membership may influence manuscript decisions. Yet, the JBMR® peer-review process remains largely free from gender bias. © 2022 American Society for Bone and Mineral Research (ASBMR).
The coregulatory effects of emotionally focused therapy
Authors: Conroy Julia , Perryman Kristi , Robinson Samantha , Rana Ryan , Blisard Paul , Gray Michelle 
Published: September 2022

AbstractThis study examined the heart rate synchrony between a single couple in emotionally focused therapy (EFT) as a method of measuring coregulatory effects over the course of treatment. A clinician who is an EFT certified therapist, supervisor, and trainer administered all eight sessions in a private practice setting. Surrogate synchrony analysis assessed heart rate synchrony between partners, indicating that significant heart rate synchrony was more likely over time. Significant heart rate synchrony was more likely during sessions that focused on clients’ sharing attachment injuries, bonds, and longings with their partner compared to sessions more focused on cognitive processing of the relationship. Additionally, there were delays in heart rate synchrony that occurred between the couple, which may be indicative of the emotional processing speed of the empathic response of each partner. Understanding the physiological synchrony patterns between dyads in treatment could clarify the potential of coregulation in the therapeutic process.
The role of heat shock proteins in metastatic colorectal cancer: A review
Authors: Javid Hossein , Hashemian Pedram , Yazdani Shaghayegh , Sharbaf Mashhad Alireza , Karimi‐Shahri Mehdi 
Published: September 2022

AbstractHeat shock proteins (HSPs) are a large molecular chaperone family classified by their molecular weights, including HSP27, HSP40, HSP60, HSP70, HSP90, and HSP110. HSPs are likely to have antiapoptotic properties and participate actively in various processes such as tumor cell proliferation, invasion, metastases, and death. In this review, we discuss comprehensively the functions of HSPs associated with the progression of colorectal cancer (CRC) and metastasis and resistance to cancer therapy. Taken together, HSPs have numerous clinical applications as biomarkers for cancer diagnosis and prognosis and potential therapeutic targets for CRC and its related metastases.
Interrelation between extracellular vesicles miRNAs with chronic lung diseases
Authors: Dhar Rajib , Mukherjee Sayantanee , Mukerjee Nobendu , Mukherjee Dattatreya , Devi Arikketh , Ashraf Ghulam Md , Alserihi Raed F. , Tayeb Hossam H. , Hashem Anwar M. , Alexiou Athanasios , Thorate Nanasaheb 
Published: September 2022

AbstractExtracellular vehicles (EVs) are nanoscale lipid bilayer vesicles that carry biologically active biomolecule cargos like proteins, lipids, and nucleic acids (DNA, RNA) outside of the cell. Blood (serum/plasma), urine, and bronchoalveolar lavage fluid are all examples of biofluids from which they may be collected. EVs play a vital role in intracellular communication. The molecular signature of EVs largely depends on the parental cell's status. EVs are classified into two groups, (1) exosomes (originated by endogenous route) and (2) microvesicles (originated from the plasma membrane, also known as ectosomes). The quantity and types of EV cargo vary during normal conditions compared to pathological conditions (chronic inflammatory lung diseases or lung cancer). Consequently, EVs contain novel biomarkers that differ based on the cell type of origin and during lung diseases. Small RNAs (e.g., microRNAs) are transported by EVs, which is one of the most rapidly evolving research areas in the field of EVs biology. EV‐mediated cargos transport small RNAs that can result in reprograming the target/recipient cells. Multiple chronic inflammatory lung illnesses, such as chronic obstructive pulmonary disease, asthma, pulmonary hypertension, pulmonary fibrosis, cystic fibrosis, acute lung injury, and lung cancer, have been demonstrated to be regulated by EV. In this review, we will consolidate the current knowledge and literature on the novel role of EVs and their small RNAs concerning chronic lung diseases (CLDs). Additionally, we will also provide better insight into the clinical and translational impact of mesenchymal stem cells‐derived EVs as novel therapeutic agents in treating CLDs.
Young bone marrow transplantation prevents aging‐related muscle atrophy in a senescence‐accelerated mouse prone 10 model
Authors: Inoue Aiko , Piao Limei , Yue Xueling , Huang Zhe , Hu Lina , Wu Hongxian , Meng Xiangkun , Xu Wenhu , Yu Chenglin , Sasaki Takeshi , Itakura Kohji , Umegaki Hiroyuki , Kuzuya Masafumi , Cheng Xian Wu 
Published: September 2022

AbstractBackgroundYoung bone marrow transplantation (YBMT) has been shown to stimulate vascular regeneration in pathological conditions, including ageing. Here, we investigated the benefits and mechanisms of the preventive effects of YBMT on loss of muscle mass and function in a senescence‐associated mouse prone 10 (SAMP10) model, with a special focus on the role of growth differentiation factor 11 (GDF‐11).MethodsNine‐week‐old male SAMP10 mice were randomly assigned to a non‐YBMT group (n = 6) and a YBMT group (n = 7) that received the bone marrow of 8‐week‐old C57BL/6 mice.ResultsCompared to the non‐YBMT mice, the YBMT mice showed the following significant increases (all P < 0.05 in 6–7 mice): endurance capacity (>61.3%); grip strength (>37.9%), percentage of slow myosin heavy chain fibres (>14.9–15.9%). The YBMT also increased the amounts of proteins or mRNAs for insulin receptor substrate 1, p‐Akt, p‐extracellular signal‐regulated protein kinase1/2, p‐mammalian target of rapamycin, Bcl‐2, peroxisom proliferator‐activated receptor‐γ coactivator (PGC‐1α), plus cytochrome c oxidase IV and the numbers of proliferating cells (n = 5–7, P < 0.05) and CD34+/integrin‐α7+ muscle stem cells (n = 5–6, P < 0.05). The YMBT significantly decreased the levels of gp91phox, caspase‐9 proteins and apoptotic cells (n = 5–7, P < 0.05) in both muscles; these beneficial changes were diminished by the blocking of GDF‐11 (n = 5–6, P < 0.05). An administration of mouse recombinant GDF‐11 improved the YBMT‐mediated muscle benefits (n = 5–6, P < 0.05). Cell therapy with young bone marrow from green fluorescent protein (GFP) transgenic mice exhibited GFP+ myofibres in aged muscle tissues.ConclusionsThese findings suggest that YBMT can prevent muscle wasting and dysfunction by mitigating apoptosis and proliferation via a modulation of GDF‐11 signalling and mitochondrial dysfunction in SAMP10 mice.
Cathelicidin‐related antimicrobial peptide mediates skeletal muscle degeneration caused by injury and Duchenne muscular dystrophy in mice
Authors: Choi Moon‐Chang , Jo Jiwon , Lee Myeongjin , Park Jonggwan , Yao Tso‐Pang , Park Yoonkyung 
Published: September 2022

AbstractBackgroundCathelicidin, an antimicrobial peptide, plays a key role in regulating bacterial killing and innate immunity; however, its role in skeletal muscle function is unknown. We investigated the potential role of cathelicidin in skeletal muscle pathology resulting from acute injury and Duchenne muscular dystrophy (DMD) in mice.MethodsExpression changes and muscular localization of mouse cathelicidin‐related antimicrobial peptide (Cramp) were examined in the skeletal muscle of normal mice treated with chemicals (cardiotoxin and BaCl2) or in dystrophic muscle of DMD mouse models (mdx, mdx/Utrn+/− and mdx/Utrn−/−). Cramp penetration into myofibres and effects on muscle damage were studied by treating synthetic peptides to mouse skeletal muscles or C2C12 myotubes. Cramp knockout (KO) mice and mdx/Utrn/Cramp KO lines were used to determine whether Cramp mediates muscle degeneration. Muscle pathophysiology was assessed by histological methods, serum analysis, grip strength and lifespan. Molecular factors targeted by Cramp were identified by the pull‐down assay and proteomic analysis.ResultsIn response to acute muscle injury, Cramp was activated in muscle‐infiltrating neutrophils and internalized into myofibres. Cramp treatments of mouse skeletal muscles or C2C12 myotubes resulted in muscle degeneration and myotube damage, respectively. Genetic ablation of Cramp reduced neutrophil infiltration and ameliorated muscle pathology, such as fibre size (P < 0.001; n = 6) and fibrofatty infiltration (P < 0.05). Genetic reduction of Cramp in mdx/Utrn+/− mice not only attenuated muscle damage (35%, P < 0.05; n = 9–10), myonecrosis (53%, P < 0.05), inflammation (37–65%, P < 0.01) and fibrosis (14%, P < 0.05) but also restored muscle fibre size (14%, P < 0.05) and muscle force (18%, P < 0.05). Reducing Cramp levels led to a 63% (male, P < 0.05; n = 10–14) and a 124% (female, P < 0.001; n = 20) increase in the lifespan of mdx/Utrn−/− mice. Proteomic and mechanistic studies revealed that Cramp cross‐talks with Ca2+ signalling in skeletal muscle through sarcoplasmic/endoplasmic reticulum Ca2+‐ATPase1 (SERCA1). Cramp binds and inactivates SERCA1, leading to the activation of Ca2+‐dependent calpain proteases that exacerbate DMD progression.ConclusionsThese findings identify Cramp as an immune cell‐derived regulator of skeletal muscle degeneration and provide a potential therapeutic target for DMD.
Simplified discriminant parameters for sarcopenia among patients undergoing haemodialysis
Authors: Kakita Daisuke , Matsuzawa Ryota , Yamamoto Shohei , Suzuki Yuta , Harada Manae , Imamura Keigo , Yoshikoshi Shun , Imai Hiroto , Osada Shiwori , Shimokado Kiyoshi , Matsunaga Atsuhiko , Tamaki Akira 
Published: September 2022

AbstractBackgroundPatients with end‐stage renal disease (ESRD) are at an increased risk of developing sarcopenia, which can lead to various adverse health outcomes. Although the diagnosis of sarcopenia is essential for clinical management, it is not feasible in routine clinical practice for populations undergoing haemodialysis because it is time‐consuming and resources are limited. Serum creatinine levels in patients with ESRD have been gaining attention as a screening parameter for sarcopenia because serum creatinine is a routinely measured byproduct of skeletal muscle metabolism. This study aimed to evaluate the discriminative ability of the creatinine‐derived index for sarcopenia in patients undergoing haemodialysis.MethodsWe diagnosed sarcopenia according to the Asian Working Group for Sarcopenia (AWGS) 2 criteria in 356 clinically stable outpatients with ESRD enrolled from three dialysis facilities. We adopted the modified creatinine index as a simplified discriminant parameter for sarcopenia in addition to the calf circumference, SARC‐F score, and combination of both (i.e. SARC‐CalF score), which are recommended by the AWGS. Receiver operating characteristic analysis and logistic regression analysis were conducted to evaluate the discriminative ability of the modified creatinine index for sarcopenia.ResultsOf the study participants, 142 (39.9%) were diagnosed with sarcopenia. The areas under the curve of the modified creatinine index against sarcopenia in the male and female participants were 0.77 (95% confidence interval [CI]: 0.71 to 0.83) and 0.77 (95% CI: 0.69 to 0.85), respectively. All simplified discriminant parameters were significantly associated with sarcopenia, even after adjusting for patient characteristics and centre. In the comparison of the odds ratios for sarcopenia for 1‐standard deviation change in the simplified discriminant parameters, the odds ratio of the modified creatinine index was 1.92 (95% CI: 1.15 to 3.19), which was lower than that of the calf circumference (odds ratio: 6.58, 95% CI: 3.32 to 13.0) and similar to that of the SARC‐F (odds ratio: 1.57, 95% CI: 1.14 to 2.16) and SARC‐CalF scores (odds ratio: 2.36, 95% CI: 1.60 to 3.47).ConclusionsThis study revealed a strong association between the creatinine‐derived index and sarcopenia in patients undergoing haemodialysis. The modified creatinine index was equal or superior to those of SARC‐F and SARC‐CalF score in discriminability for sarcopenia. However, the ability of the calf circumference to discriminate sarcopenia is extremely high, and further study is needed to determine whether it can be used to detect deterioration of muscle mass and function over time.
Liver‐originated small extracellular vesicles with TM4SF5 target brown adipose tissue for homeostatic glucose clearance
Authors: Jung Jae Woo , Kim Ji Eon , Kim Eunmi , Lee Hyejin , Lee Haesong , Shin Eun‐Ae , Lee Jung Weon 
Published: September 2022

AbstractTransmembrane 4 L six family member 5 (TM4SF5) is involved in chronic liver disease, although its role in glucose homeostasis remains unknown. TM4SF5 deficiency caused age‐dependent glucose (in)tolerance with no link to insulin sensitivity. Further, hepatic TM4SF5 binding to GLUT1 promoted glucose uptake and glycolysis. Excessive glucose repletion caused hepatocytes to secrete small extracellular vesicles (sEVs) loaded with TM4SF5 (hep‐sEVTm4sf5), suggesting a role for sEVTm4sf5 in glucose metabolism and homeostasis. Hep‐sEVTm4sf5 were smaller than sEVControl and recruit proteins for efficient organ tropism. Liver‐derived sEVs, via a liver‐closed vein circuit (LCVC) using hepatic TM4SF5‐overexpressing (Alb‐Tm4sf5 TG) mice (liv‐sEVTm4sf5), improved glucose tolerance in Tm4sf5−/− KO mice and targeted brown adipose tissues (BATs), possibly allowing the clearance of blood glucose as heat independent of UCP1. Taken together, hep‐sEVTm4sf5 might clear high extracellular glucose levels more efficiently by targeting BAT compared with hep‐sEVControl, suggesting an insulin‐like role for sEV™4SF5 in affecting age‐related metabolic status and thus body weight (BW).
Addressing MISEV guidance using targeted LC‐MS/MS: A method for the detection and quantification of extracellular vesicle‐enriched and contaminant protein markers from blood
Authors: Newman Lauren A. , Useckaite Zivile , Rowland Andrew 
Published: September 2022

AbstractExtracellular vesicles (EVs) are membrane‐bound nanosized particles released by cells into bodily fluids containing an array of molecular cargo. Several characteristics, including stability and accessibility in biofluids such as blood and urine, make EVs and associated cargo attractive biomarkers and therapeutic tools. To promote robust characterisation of EV isolates, the minimal requirements for the study of extracellular vesicles (MISEV) guidelines recommend the analysis of proteins in EV samples, including positive EV‐associated markers and negative contaminant markers based on commonly co‐isolated components of the starting material. Western blot is conventionally used to address the guidelines; however, this approach is limited in terms of quantitation and throughput and requires larger volumes than typically available for patient samples. The increasing application of EVs as liquid biopsy in clinical contexts requires a high‐throughput multiplexed approach for analysis of protein markers from small volumes of starting material. Here, we document the development and validation of a targeted liquid chromatography tandem mass spectrometry (LC‐MS/MS) assay for the quantification of markers associated with EVs and non‐vesicle contaminants from human blood samples. The assay was highly sensitive, requiring only a fraction of the sample consumed for immunoblots, fully quantitative and high throughput. Application of the assay to EVs isolated by size exclusion chromatography (SEC) and precipitation revealed differences in yield, purity and recovery of subpopulations.
Diploic vein morphology in normal and craniosynostotic adult human skulls
Authors: Eisová Stanislava , Velemínský Petr , Velemínská Jana , Bruner Emiliano 
Published: September 2022

AbstractDiploic veins (DV) run within the cranial diploe, where they leave channels that can be studied in osteological samples. This study investigates overall DV variability in human adults and the effects of sex, age, cranial dimensions, and dysmorphogenesis associated with craniosynostosis (CS). The morphology of macroscopic diploic channels was analyzed in a set of the qualitative and quantitative variables in computed tomography‐images of crania of anatomically normal and craniosynostotic adult individuals. Macroscopic diploic channels occur most frequently in the frontal and parietal bones, often with a bilaterally symmetrical pattern. DV‐features (especially DV‐pattern) are characterized by high individual diversity. On average, there are 5.4 ± 3.5 large macroscopic channels (with diameters >1 mm) per individual, with a mean diameter of 1.7 ± 0.4 mm. Age and sex have minor effects on DV, and cranial proportions significantly influence DV only in CS skulls. CS is associated with changes in the DV numbers, distributions, and diameters. Craniosynostotic skulls, especially brachycephalic skulls, generally present smaller DV diameters, and dolichocephalic skulls display increased number of frontal DV. CS, associated with altered cranial dimensions, suture imbalance, increased intracranial pressure, and with changes of the endocranial craniovascular system, significantly also affects the macroscopic morphology of DV in adults, in terms of both structural (topological redistribution) and functional factors. The research on craniovascular morphology and CS may be of interest in biological anthropology, paleopathology, medicine (e.g., surgical planning), but also in zoology and paleontology.
Architecture and tube structure of Sabellaria spinulosa (Leuckart, 1849): Comparison with the Mediterranean S. alveolata congener
Authors: Sanfilippo Rossana , Rosso Antonietta , Viola Alfio , Guido Adriano , Deias Claudia 
Published: September 2022

AbstractThe Atlantic‐Mediterranean polychaete Sabellaria spinulosa (Leuckart, 1849) lives in agglutinated tubes forming discrete reef‐like bioconstructions on shallow‐water bottoms beaten by waves where sediment particles are constantly resuspended. Tubes are built with sand grains glued by a proteinaceous cement. Analyses of a S. spinulosa reef sample of this worm collected off the Casarza coast (central Adriatic Sea) allowed the description of its tube architecture and gluing modality. The tube consists of three layers of agglutinated sand: (a) a thin inner layer with sandy particles arranged side by side with a flat side facing the tube lumen (b) a thick middle layer with larger isodiametric and squat grains with empty pores in between; and (c) a thin discontinuous outer layer of heterometric clasts, prevalently large and flat, diverging towards the opening. This fits the general tube construction known for S. alveolata and in general for tubes of the sabellariidae family, but compared to Sabellaria alveolata, S. spinulosa possesses a smaller tube with a wall about 1/3 thick; the agglutinated sandy elements are finer, and some number of muddy particles participates in the tube construction. Morphological and epifluorescence observations revealed that biocement portions are irregularly and haphazardly distributed compared with those of S. alveolata that consist of drops and strips of glue carefully placed. Adjacent tubes leave empty interspaces in between them only locally filled by loose sand, extremely reduced to absent in S. alveolata.
Variable evidence for convergence in morphology and function across avian nectarivores
Authors: Hewes Amanda E. , Cuban David , Groom Derrick J. E. , Sargent Alyssa J. , Beltrán Diego F. , Rico‐Guevara Alejandro 
Published: September 2022

AbstractNectar‐feeding birds provide an excellent system in which to examine form‐function relationships over evolutionary time. There are many independent origins of nectarivory in birds, and nectar feeding is a lifestyle with many inherent biophysical constraints. We review the morphology and function of the feeding apparatus, the locomotor apparatus, and the digestive and renal systems across avian nectarivores with the goals of synthesizing available information and identifying the extent to which different aspects of anatomy have morphologically and functionally converged. In doing so, we have systematically tabulated the occurrence of putative adaptations to nectarivory across birds and created what is, to our knowledge, the first comprehensive summary of adaptations to nectarivory across body systems and taxa. We also provide the first phylogenetically informed estimate of the number of times nectarivory has evolved within Aves. Based on this synthesis of existing knowledge, we identify current knowledge gaps and provide suggestions for future research questions and methods of data collection that will increase our understanding of the distribution of adaptations across bodily systems and taxa, and the relationship between those adaptations and ecological and evolutionary factors. We hope that this synthesis will serve as a landmark for the current state of the field, prompting investigators to begin collecting new data and addressing questions that have heretofore been impossible to answer about the ecology, evolution, and functional morphology of avian nectarivory.