bluuebunny/crossref_metadata_2025_split huggingface dataset:
Controlling sulfurization of 2D Mo2C crystal for Mo2C/MoS2-based memristor and artificial synapse
Authors: Tang Xin , Yang Leilei , Huang Junhua , Chen Wenjun , Li Baohua , Yang Shaodian , Yang Rongliang , Zeng Zhiping , Tang Zikang , Gui Xuchun 
Published: November 2022

AbstractOwing to the conductance-adjustable performance, the emerging two-terminal memristors are promising candidates for artificial synapses and brain-spired neuromorphic computing. Although memristors based on molybdenum disulfide (MoS2) have displayed outstanding performance, such as thermal stability and high energy efficiency, reports on memristors based on MoS2 as the functional layer to simulate synaptic behavior are limited. Herein, a homologous Mo2C/MoS2-based memristor is prepared by partially sulfuring two-dimensional Mo2C crystal. The memristor shows good stability, excellent retention (~104 s) and endurance (>100 cycles), and a high ON/OFF ratio (>103). Moreover, for comprehensively mimicking biological synapses, the essential synaptic functions of the device are systematically analyzed, including paired-pulse facilitation (PPF), short-term plasticity (STP), long-term plasticity (LTP), long-term depression (LTD), and the transitions from STP to LTP. Notably, this artificial synapse could keep a high-level stable memory for a long time (60 s) after repeated stimulation. These results prove that our device is highly desirable for biological synapses, which show great potential for application in future high-density storage and neuromorphic computing systems.
Pathogen spillover driven by rapid changes in bat ecology
Authors: Eby Peggy , Peel Alison J. , Hoegh Andrew , Madden Wyatt , Giles John R. , Hudson Peter J. , Plowright Raina K. 
Published: November 2022

AbstractDuring recent decades, pathogens that originated in bats have become an increasing public health concern. A major challenge is to identify how those pathogens spill over into human populations to generate a pandemic threat1. Many correlational studies associate spillover with changes in land use or other anthropogenic stressors2,3, although the mechanisms underlying the observed correlations have not been identified4. One limitation is the lack of spatially and temporally explicit data on multiple spillovers, and on the connections among spillovers, reservoir host ecology and behaviour and viral dynamics. We present 25 years of data on land-use change, bat behaviour and spillover of Hendra virus from Pteropodid bats to horses in subtropical Australia. These data show that bats are responding to environmental change by persistently adopting behaviours that were previously transient responses to nutritional stress. Interactions between land-use change and climate now lead to persistent bat residency in agricultural areas, where periodic food shortages drive clusters of spillovers. Pulses of winter flowering of trees in remnant forests appeared to prevent spillover. We developed integrative Bayesian network models based on these phenomena that accurately predicted the presence or absence of clusters of spillovers in each of the 25 years. Our long-term study identifies the mechanistic connections between habitat loss, climate and increased spillover risk. It provides a framework for examining causes of bat virus spillover and for developing ecological countermeasures to prevent pandemics.
A biomechanics dataset of healthy human walking at various speeds, step lengths and step widths
Authors: van der Zee Tim J. , Mundinger Emily M. , Kuo Arthur D. 
Published: November 2022

AbstractThe biomechanics of human walking are well documented for standard conditions such as for self-selected step length and preferred speed. However, humans can and do walk with a variety of other step lengths and speeds during daily living. The variation of biomechanics across gait conditions may be important for describing and determining the mechanics of locomotion. To address this, we present an open biomechanics dataset of steady walking at a broad range of conditions, including 33 experimentally-controlled combinations of speed (0.7–2.0 m·s−1), step length (0.5–1.1 m), and step width (0–0.4 m). The dataset contains ground reaction forces and motions from healthy young adults (N = 10), collected using split-belt instrumented treadmill and motion capture systems respectively. Most trials also include pre-computed inverse dynamics, including 3D joint positions, angles, torques and powers, as well as intersegmental forces. Apart from raw data, we also provide five strides of good quality data without artifacts for each trial, and sample software for visualization and analysis.
Comprehensive dynamic and kinematic analysis of the rodent hindlimb during over ground walking
Authors: Dienes Jack , Hicks Brody , Slater Conrad , Janson Kevin D. , Christ George J. , Russell Shawn D. 
Published: November 2022

AbstractThe rat hindlimb is a frequently utilized pre-clinical model system to evaluate injuries and pathologies impacting the hindlimbs. These studies have demonstrated the translational potential of this model but have typically focused on the force generating capacity of target muscles as the primary evaluative outcome. Historically, human studies investigating extremity injuries and pathologies have utilized biomechanical analysis to better understand the impact of injury and extent of recovery. In this study, we expand that full biomechanical workup to a rat model in order to characterize the spatiotemporal parameters, ground reaction forces, 3-D joint kinematics, 3-D joint kinetics, and energetics of gait in healthy rats. We report data on each of these metrics that meets or exceeds the standards set by the current literature and are the first to report on all these metrics in a single set of animals. The methodology and findings presented in this study have significant implications for the development and clinical application of the improved regenerative therapeutics and rehabilitative therapies required for durable and complete functional recovery from extremity traumas, as well as other musculoskeletal pathologies.
Outcome of pulpotomy in permanent teeth with irreversible pulpitis: a systematic review and meta-analysis
Authors: Ather Amber , Patel Biraj , Gelfond Jonathan A. L. , Ruparel Nikita B. 
Published: November 2022

AbstractTreatment planning is key to clinical success. Permanent teeth diagnosed with “irreversible pulpitis” have long been implied to have an irreversibly damaged dental pulp that is beyond repair and warranting root canal treatment. However, newer clinical approaches such as pulpotomy, a minimally invasive and biologically based procedure have re-emerged to manage teeth with pulpitis. The primary aim of the study was to conduct a meta-analysis to comprehensively estimate the overall success rate of pulpotomy in permanent teeth with irreversible pulpitis as a result of carious pulp exposure. The secondary aim of the study was to investigate the effect of predictors such as symptoms, root apex development (closed versus open), and type of pulp capping material on the success rate of pulpotomy. Articles were searched using PubMed, Scopus, CENTRAL, and Web of Science databases, until January 2021. Outcomes were calculated by pooling the success rates with a random effect model. Comparison between the different subgroups was conducted using the z statistic test for proportion with significance set at alpha = 0.05. A total of 1,116 records were retrieved and 11 studies were included in the quantitative analysis. The pooled success rate for pulpotomy in teeth with irreversible pulpitis was 86% [95% CI: 0.76–0.92; I2 = 81.9%]. Additionally, prognostic indicators of success were evaluated. Stratification of teeth based on (1) symptoms demonstrated that teeth with symptomatic and asymptomatic irreversible pulpitis demonstrated success rate of 84% and 91% respectively, with no significant difference (p = 0.18) using z-score analysis; (2) open apex teeth demonstrated a significantly greater success rate (96%) compared to teeth with closed apex (83%) (p = 0.02), and (3) pulp capping materials demonstrated that Biodentine yielded significantly better success rates compared to Mineral Trioxide Aggregate (MTA), calcium hydroxide, and Calcium Enriched Mixture (CEM.) Collectively, this is the first meta-analytical study to determine the clinical outcome of pulpotomy for carious teeth with irreversible pulpitis and it’s predictors for success. Moreover, we identify the stage of root development and type of biomaterial as predictors for success of pulpotomy.
Mechanical power is associated with weaning outcome in critically ill mechanically ventilated patients
Authors: Yan Yao , Xie Yongpeng , Chen Xiaobing , Sun Yan , Du Zhiqiang , Wang Yanli , Li Xiaomin 
Published: November 2022

AbstractSeveral single-center studies have evaluated the predictive performance of mechanical power (MP) on weaning outcomes in prolonged invasive mechanical ventilation (IMV) patients. The relationship between MP and weaning outcomes in all IMV patients has rarely been studied. A retrospective study was conducted on MIMIC-IV patients with IMV for more than 24 h to investigate the correlation between MP and weaning outcome using logistic regression model and subgroup analysis. The discriminative ability of MP, MP normalized to dynamic lung compliance (Cdyn-MP) and MP normalized to predicted body weight (PBW-MP) on weaning outcome were evaluated by analyzing the area under the receiver-operating characteristic (AUROC). Following adjustment for confounding factors, compared with the reference group, the Odds Ratio of weaning failure in the maximum MP, Cdyn-MP, and PBW-MP groups increased to 3.33 [95%CI (2.04–4.53), P < 0.001], 3.58 [95%CI (2.27–5.56), P < 0.001] and 5.15 [95%CI (3.58–7.41), P < 0.001], respectively. The discriminative abilities of Cdyn-MP (AUROC 0.760 [95%CI 0.745–0.776]) and PBW-MP (AUROC 0.761 [95%CI 0.744–0.779]) were higher than MP (AUROC 0.745 [95%CI 0.730–0.761]) (P < 0.05). MP is associated with weaning outcomes in IMV patients and is an independent predictor of the risk of weaning failure. Cdyn-MP and PBW-MP showed higher ability in weaning failure prediction than MP.
Conductive cross-section preparation of non-conductive painting micro-samples for SEM analysis
Authors: Jaques Victory Armida Janine , Zikmundová Eva , Holas Jiří , Zikmund Tomáš , Kaiser Jozef , Holcová Katarína 
Published: November 2022

AbstractScanning electron microscopy (SEM) is a common method for the analysis of painting micro-samples. The high resolution of this technique offers precise surface analysis and can be coupled with an energy-dispersive spectrometer for the acquisition of the elemental composition. For light microscopy and SEM analysis, the painting micro-samples are commonly prepared as cross-sections, where the micro-sample positioned on the side is embedded in a resin. Therefore, the sequence of its layers is exposed after the cross-section is polished. In common cases outside of cultural heritage, a conductive layer is applied on the polished side, but in this field, the measurements are mostly done in low-vacuum SEM (LV-SEM). Although the charging effect is reduced in LV-SEM, it can still occur, and can hardly be prevented even with carbon tape or paint. This work presents two conductive cross-section preparation methods for non-conductive samples, which reduce charging effects without impairing the sample integrity.
Fragment-based virtual screening identifies a first-in-class preclinical drug candidate for Huntington’s disease
Authors: Galyan Simon Marius , Ewald Collin Y. , Jalencas Xavier , Masrani Shyam , Meral Selin , Mestres Jordi 
Published: November 2022

AbstractCurrently, there are no therapies available to modify the disease progression of Huntington’s disease (HD). Recent clinical trial failures of antisense oligonucleotide candidates in HD have demonstrated the need for new therapeutic approaches. Here, we developed a novel in-silico fragment scanning approach across the surface of mutant huntingtin (mHTT) polyQ and predicted four hit compounds. Two rounds of compound analoging using a strategy of testing structurally similar compounds in an affinity assay rapidly identified GLYN122. In vitro, GLYN122 directly binds and reduces mHTT and induces autophagy in neurons. In vivo, our results confirm that GLYN122 can reduce mHTT in the cortex and striatum of the R/2 mouse model of Huntington’s disease and subsequently improve motor symptoms. Thus, the in-vivo pharmacology profile of GLYN122 is a potential new preclinical candidate for the treatment of HD.
Bacteriological and serological investigation of Clostridium perfringens in lambs
Authors: Moustafa Shymaa , Zakaria Islam , Moustafa Abdelmoneim , AboSakaya Rania , Selim Abdelfattah 
Published: November 2022

AbstractClostridium perfringens is one of the most common and important pathogens in livestock due to its ability to produce a diverse arsenal of toxins. Owing to C. perfringens economic importance, this study aimed to determine the types and toxins of C. perfringens in newly born lambs. A total of 200 lambs of less than one-month old were examined, including 100 lambs suffered from diarrhea, 60 freshly dead and 40 apparent healthy. C. perfringens was identified morphologically and biochemically using bacteriological culture in 103 of 200 samples (51.5%). Moreover, serological typing of C. perfringens isolates revealed three serotypes, C. perfringens type A (54.2%), C. perfringens type B (28.8%) and C. perfringens type D (16.9%). The highest prevalence rate for C. perfringens infection was observed in winter (58.25%) in comparison with other seasons. The findings of the present study confirm the presence of enterotoxmia among lambs in localities under study, causing economic losses. The proper vaccination schedule particularly against C. perfringens type A and B is highly recommended.
Modelling of n-Hexadecane bioremediation from soil by slurry bioreactors using artificial neural network method
Authors: Morovati Roya , Abbasi Fariba , Samaei Mohammad Reza , Mehrazmay Hamid , Lari Ali Rasti 
Published: November 2022

AbstractDiesel oil is known to be one of the major petroleum products that can pollute water and soil. Soil pollution caused by petroleum hydrocarbons has substantially impacted the environment, especially in the Middle East. In this study, modeling and optimization of hexadecane removal from soil was performed using two pure cultures of Acinetobacter and Acromobacter and consortium culture of both bacterial species using artificial neural network (ANN) method. Then the best ANN structure was proposed based on mean square error (MSE) as well as correlation coefficient (R) for pure cultures of Acinetobacter and Acromobacter as well as their consortium. The results showed that the correlations between the actual data and the data predicted by ANN (R2) in Acromobacter, Acinetobacter and consortium of both cultures were 0.50, 0.47 and 0.63, respectively. Despite the low correlation between the experimental data and the data predicted by the ANN, the correlation coefficient and the precision of ANN for the consortium was higher. As a result, ANN had desirable precision to predict hexadecan removal by the cobsertium culture of Ochromobater and Acintobacter.
Placental vascular alterations are associated with early neurodevelopmental and pulmonary impairment in the rabbit fetal growth restriction model
Authors: Valenzuela Ignacio , Basurto David , Regin Yannick , Gie Andre , van der Veeken Lennart , Vergote Simen , Muñoz-Moreno Emma , Leszczynski Bartosz , Tielemans Birger , Velde Greetje Vande , Deprest Jan , van der Merwe Johannes 
Published: November 2022

AbstractFetal growth restriction is one of the leading causes of perinatal mortality and morbidity and has consequences that extend well beyond the neonatal period. Current management relies on timely delivery rather than improving placental function. Several prenatal strategies have failed to show benefit in clinical trials after promising results in animal models. Most of these animal models have important developmental and structural differences compared to the human and/or are insufficiently characterized. We aimed to describe placental function and structure in an FGR rabbit model, and to characterize the early brain and lung developmental morbidity using a multimodal approach. FGR was induced in time-mated rabbits at gestational day 25 by partial uteroplacental vessel ligation in one horn. Umbilical artery Doppler was measured before caesarean delivery at gestational day 30, and placentas were harvested for computed microtomography and histology. Neonates underwent neurobehavioral or pulmonary functional assessment the day after delivery, followed by brain or lung harvesting, respectively. Neuropathological assessment included multiregional quantification of neuron density, apoptosis, astrogliosis, cellular proliferation, and oligodendrocyte progenitors. Brain region volumes and diffusion metrics were obtained from ex-vivo brain magnetic resonance imaging. Lung assessment included biomechanical tests and pulmonary histology. Fetal growth restriction was associated with labyrinth alterations in the placenta, driven by fetal capillary reduction, and overall reduced vessels volume. FGR caused altered neurobehavior paralleled by regional neuropathological deficits and reduced fractional anisotropy in the cortex, white matter, and hippocampus. In addition, FGR kittens presented functional alterations in the peripheral lung and structurally underdeveloped alveoli. In conclusion, in a uteroplacental insufficiency FGR rabbit model, placental vascular alterations coincide with neurodevelopmental and pulmonary disruption.
Climate change alters impacts of extreme climate events on a tropical perennial tree crop
Authors: Creedy Thomas J. , Asare Rebecca A. , Morel Alexandra C. , Hirons Mark , Mason John , Malhi Yadvinder , McDermott Constance L. , Opoku Emmanuel , Norris Ken 
Published: November 2022

AbstractAnthropogenic climate change causes more frequent and intense fluctuations in the El Niño Southern Oscillation (ENSO). Understanding the effects of ENSO on agricultural systems is crucial for predicting and ameliorating impacts on lives and livelihoods, particularly in perennial tree crops, which may show both instantaneous and delayed responses. Using cocoa production in Ghana as a model system, we analyse the impact of ENSO on annual production and climate over the last 70 years. We report that in recent decades, El Niño years experience reductions in cocoa production followed by several years of increased production, and that this pattern has significantly shifted compared with prior to the 1980s. ENSO phase appears to affect the climate in Ghana, and over the same time period, we see corresponding significant shifts in the climatic conditions resulting from ENSO extremes, with increasing temperature and water stress. We attribute these changes to anthropogenic climate change, and our results illustrate the big data analyses necessary to improve understanding of perennial crop responses to climate change in general, and climate extremes in particular.
Experimental study on shear characteristics of the silty clay soil-ice interface
Authors: Huang Wanjun , Mao Xuesong , Wu Qian , Chen Linlin 
Published: November 2022

AbstractDuring the spring thawing, the decrease of soil-ice interface strength by temperature may lead to slope instability. For this reason, some researchers have explored the relationship between temperature and soil-ice interface strength. However, previous studies have not systematically explored the change law of strength at the soil-ice interface from negative temperature to 0 °C. Therefore, direct shear tests were conducted at different shear temperatures and different moisture contents. The effects of temperature and moisture content on strength, cohesion, and internal friction angle are analyzed, while the shear failure mechanism of specimens at different temperatures is discussed according to the location of the shear failure surface. The results show that: Shear properties of soil ice specimens are related to the unfrozen moisture content. The strength of the sample decreases with increasing temperature, and the change in strength is most significant from − 2 to − 0 °C. The strength reduction in this range is from 21.8 to 74.8%, and the higher the moisture content the more obvious this phenomenon is. The shear index tends to decrease with the increase of unfrozen water content, and the greater the increase of unfrozen water, the faster the decrease of both, especially in stage 2. When the temperature is higher than − 5℃, the failure surface is located above the soil-ice interface, and the strength of the specimen is similar to that of the frozen soil. When the temperature is − 10℃, the shear damage surface appears at the soil-ice interface, and the strength of the specimen is determined by the strength of the soil-ice interface.
In vitro study of the modulatory effects of heat-killed bacterial biomass on aquaculture bacterioplankton communities
Authors: Sousa J. M. G. , Louvado A. , Coelho F. J. R. C. , Oliveira V. , Oliveira H. , Cleary D. F. R. , Gomes N. C. M. 
Published: November 2022

AbstractRecent studies have shown that the addition of non-viable microbial biomass or their components (postbiotics) to fish feed can modulate the gut microbiome and positively influence fish health in aquaculture systems. However, no information was hitherto available on the use of non-viable microbial biomass to manipulate aquaculture bacterioplankton communities. To fill this gap, here we used an in vitro model to assess the effects of heat-killed biomasses of an antagonistic strain Pseudoalteromonas rubra SubTr2 and a non-antagonist strain Escherichia coli DH5α on bacterioplankton communities of a recirculating aquaculture system (RAS). Our results showed that these biomasses can have generalist and species-specific effects on aquaculture bacterioplankton structure and function. In addition, they enriched the abundance of bacterial predators, reduced bacterial load and potentially influenced nutrient cycling and pathogen development in aquaculture water. Despite its preliminary nature, for the first time, this study showed that heat-killed microbial biomass has potential application as an in situ modulator of bacterioplankton in aquaculture systems.
Birefringence-derived scleral artifacts in optical coherence tomography images of eyes with pathologic myopia
Authors: Miura Masahiro , Makita Shuichi , Yasuno Yoshiaki , Miki Atsuya , Nemoto Rei , Shimizu Hiroyuki , Azuma Shinnosuke , Mino Toshihiro , Yamaguchi Tatsuo 
Published: November 2022

AbstractWe investigated birefringence-derived scleral artifacts in optical coherence tomography (OCT) images of eyes with pathologic myopia. This study included 76 eyes of 42 patients with pathologic myopia. Five sets of OCT B-scan images of the macula were obtained using commercial swept-source OCT. A dataset of prototype swept-source polarization-diversity OCT images was used to identify polarization-dependent OCT images (i.e., complex averaging of OCT signals from two polarization channels) and polarization-independent OCT images (i.e., intensity averaging of two OCT signals). Polarization-dependent OCT images and commercial OCT images were assessed for the presence of birefringence-derived artifacts by comparison with polarization-independent OCT images. Both polarization-dependent OCT images and commercial OCT images contained scleral vessel artifacts. Scleral vessel artifacts were present in 46 of 76 eyes (60.5%) imaged by polarization-dependent OCT and 17 of 76 eyes (22.4%) imaged by commercial OCT. The proportion of images that showed scleral vessel artifacts was significantly greater among polarization-dependent OCT images than among commercial OCT images (P < 0.001). Additionally, polarization-dependent OCT images showed low-intensity band artifacts. This study demonstrated the existence of birefringence-derived scleral artifacts in commercial OCT images and indicated that polarization-diversity OCT is an effective tool to evaluate the presence of these artifacts.