bluuebunny/crossref_metadata_2025_split huggingface dataset:
Xanthomonas hortorum pv. gardneri TAL effector AvrHah1 is necessary and sufficient for increased persistence of Salmonella enterica on tomato leaves
Authors: Cowles Kimberly N. , Block Anna K. , Barak Jeri D. 
Published: May 2022

AbstractSalmonella enterica is ubiquitous in the plant environment, persisting in the face of UV stress, plant defense responses, desiccation, and nutrient limitation. These fluctuating conditions of the leaf surface result in S. enterica population decline. Biomultipliers, such as the phytopathogenic bacterium Xanthomonas hortorum pv. gardneri (Xhg), alter the phyllosphere to the benefit of S. enterica. Specific Xhg-dependent changes to this niche that promote S. enterica persistence remain unclear, and this work focuses on identifying factors that lead to increased S. enterica survival on leaves. Here, we show that the Xhg transcription activator-like effector AvrHah1 is both necessary and sufficient for increased survival of S. enterica on tomato leaves. An Xhg avrHah1 mutant fails to influence S. enterica survival while addition of avrHah1 to X. vesicatoria provides a gain of function. Our results indicate that although Xhg stimulates a robust immune response from the plant, AvrHah1 is not required for these effects. In addition, we demonstrate that cellular leakage that occurs during disease is independent of AvrHah1. Investigation of the interaction between S. enterica, Xhg, and the plant host provides information regarding how an inhospitable environment changes during infection and can be transformed into a habitable niche.
Home intervention for children and adolescents with unilateral trans-radial and partial carpal reduction deficiencies
Authors: Lukaszek Jessica L. , Borrell Jordan A. , Cortes Claudia , Zuniga Jorge M. 
Published: May 2022

AbstractCurrent training interventions assessing pediatric functional motor skills do not account for children and adolescents with upper limb reductions who utilize a prosthesis. Prosthesis rejection showed that 1 out of 5 prosthesis users will reject their prosthesis due to lack of durability, lack of function, not meeting the participant’s needs, perceived lack of need, and medical restrictions indicating that prosthetic users believed they were more functional without the device. It was hypothesized that an 8-week Home Intervention program will result in significant improvements in gross manual dexterity, bimanual coordination, and the functional activities performed during the program. It was also hypothesized that the novel Prosthesis Measurement of Independent Function (PMIF) score will reflect the Home Intervention performance improvements. Five pediatric participants (ages 5–19 years) with congenital upper limb reductions were fitted with a 3D printed upper extremity prosthesis for their affected limb. Participants then completed the 8-week Home Intervention which included Training activities completed 2×/week for 8 weeks and Non-Training activities completed only at week 1 and week 8. Participant’s times were recorded along with each participant receiving a PMIF score ranging from 0 = unable to complete activity, to 7 = complete independence with activity completion. Results showed a decrease in overall averaged activity times amongst all activities. For all activities performed, individual averaged time decreased with the exception of Ball Play which increased over the 8-week intervention period. There was significant interaction for Home Intervention performance with F = 2.904 (p = 0.003). All participants increased their PMIF scores to 7 (complete independence) at the end of the 8 week intervention period. Decreases in time averages and increases in PMIF scores indicate that learning and functional use of the prostheses have occurred amongst the pediatric participants.
Experimental evidence of shear waves in fractional viscoelastic rheological models
Authors: Gomez Antonio , Callejas Antonio , Rus Guillermo , Saffari Nader 
Published: May 2022

AbstractFractional viscoelastic rheological models, such as the Kelvin Voigt Fractional Derivative model, have been proposed in the literature for modelling shear wave propagation in soft tissue. In this article, our previously developed wave propagation model for transluminal propagation based on a Kelvin Voigt Fractional Derivative wave equation is experimentally validated. The transluminal procedure uses the transmission and detection of shear waves through the luminal wall. The model was compared against high-speed camera observations in translucent elastography phantoms with similar viscoelastic properties to prostate tissue. An ad hoc cross-correlation procedure was used to reconstruct the angular displacement from the high-speed camera observations. Rheometry and shear wave elastography were used for characterising the shear wave velocity dispersion curve for the phantoms. Fractional viscoelastic properties were derived after fitting the dispersion curve to its analytical expression. Propagation features and amplitude spectra from simulations and high-speed camera observations were compared. The obtained results indicate that the model replicates the experimental observations with acceptable accuracy. The model presented here provides a useful tool to model transluminal procedures based on wave propagation and its interaction with the mechanical properties of the tissue outside the lumen.
Hepatitis B virus (HBV) serological patterns among the HBsAg negative hospital attendees screened for immunization
Authors: Kafeero Hussein Mukasa , Ndagire Dorothy , Ocama Ponsiano , Kato Charles Drago , Wampande Eddie , Walusansa Abdul , Kajumbula Henry , Kateete David , Sendagire Hakim 
Published: May 2022

AbstractThe Hepatitis B virus (HBV) is a highly infectious virus and is endemic in Uganda. It is one of the major etiological agents for liver diseases including liver cancer. In this work, we evaluated the prevalence of the HBV serological markers and the associated socio-demographic factors among hepatitis B surface antigen (HBsAg) seronegative persons screened during routine immunization against the virus in eastern Uganda. Data on the socio-demographic characteristics were collected using a structured questionnaire, while that on the serological markers were obtained from serum samples and evaluated by using the 5-panel HBV One Step Hepatitis B Virus Combo Test Device (FastepR, HBV-P43M). The following markers were evaluated by the panel: HBsAg, HBsAb, HBcAb, and HBeAb. Data were analyzed using SPSS (version 26), and multinomial logistic regression was used to elicit the adjusted odds ratio. All the analysis were performed at a 95% confidence limit, and a P value ≤ 0.05 was considered significant. The 424 participants included in this study were mainly female (62.3%), married (55.4%) and aged 30 years and above (54.2%). The seropositivity of the HBsAb, HBeAb, HBcAb marker prevalence rates was 48(11.3%), 73(17.2%) and 45(10.6%) respectively. The majority of the participants (327, 77.1%) did not present with any marker. Married paricipants were significantly associated with reduced HBsAb seropositvity rate, whereas young people aged 18–29 years were associated the with increased odds of HBsAb seropositivity (p < 0.05). Male participants were significantly associated with the HBeAb and HBcAb seropositivity (p < 0.05). Similarly, contact with an HBV infected person was significantly associated with HBeAb and HBcAb seropositivity (p < 0.05). Further still, blood transfusion was significantly associated with the increased risk of HBcAb seropositivity (P < 0.05). This study has revealed a prevalence of HBV serological markers among the HBsAg seronegative persons in this community and an increased risk of transmission of the virus in the community. Our findings have key consequences pertaining the interventions that are pertinent in the control and prevention of the spread of the virus among apparently health persons.
Individual and joint estimation of humpback whale migratory patterns and their environmental drivers in the Southwest Atlantic Ocean
Authors: Bedriñana-Romano Luis , Zerbini Alexandre N. , Andriolo Artur , Danilewicz Daniel , Sucunza Federico 
Published: May 2022

AbstractHumpback whales (Megaptera novaeangliae) perform seasonal migrations from high latitude feeding grounds to low latitude breeding and calving grounds. Feeding grounds at polar regions are currently experiencing major ecosystem modifications, therefore, quantitatively assessing species responses to habitat characteristics is crucial for understanding how whales might respond to such modifications. We analyzed satellite telemetry data from 22 individual humpback whales in the Southwest Atlantic Ocean (SWA). Tagging effort was divided in two periods, 2003–2012 and 2016–2019. Correlations between whale’s movement parameters and environmental variables were used as proxy for inferring behavioral responses to environmental variation. Two versions of a covariate-driven continuous-time correlated random-walk state-space model, were fitted to the data: i) Population-level models (P-models), which assess correlation parameters pooling data across all individuals or groups, and ii) individual-level models (I-models), fitted independently for each tagged whale. Area of Restricted Search behavior (slower and less directionally persistent movement, ARS) was concentrated at cold waters south of the Polar Front (~ 50°S). The best model showed that ARS was expected to occur in coastal areas and over ridges and seamounts. Ice coverage during August of each year was a consistent predictor of ARS across models. Wind stress curl and sea surface temperature anomalies were also correlated with movement parameters but elicited larger inter-individual variation. I-models were consistent with P-models’ predictions for the case of females accompanied by calves (mothers), while males and those of undetermined sex (males +) presented more variability as a group. Spatial predictions of humpback whale behavioral responses showed that feeding grounds for this population are concentrated in the complex system of islands, ridges, and rises of the Scotia Sea and the northern Weddell Ridge. More southernly incursions were observed in recent years, suggesting a potential response to increased temperature and large ice coverage reduction observed in the late 2010s. Although, small sample size and differences in tracking duration precluded appropriately testing predictions for such a distributional shift, our modelling framework showed the efficiency of borrowing statistical strength during data pooling, while pinpointing where more complexity should be added in the future as additional data become available.
Promoting a growth mindset decreases behavioral self-handicapping among students who are on the fixed side of the mindset continuum
Authors: Török Lilla , Szabó Zsolt Péter , Orosz Gábor 
Published: May 2022

AbstractThe present study examined the interplay between chronic intelligence beliefs, manipulated intelligence beliefs and self-handicapping processes. Prior studies showed that holding more of a fixed intelligence theory makes one vulnerable to resorting to self-protective mechanisms such as self-handicapping, while growth intelligence mindset can serve as a protective factor for self-handicapping. However, no prior studies have examined the potential interaction between pre-experimental intelligence beliefs, the manipulation of intelligence mindsets and behavioral self-handicapping. Although in our student sample (N = 101) there was no main effect of the mindset manipulations, participants with more of an initial fixed mindset benefited a lot from a brief growth mindset manipulation and displayed the lowest levels of behavioral self-handicapping. The mindset manipulation had less effect on self-handicapping of originally more of a growth-mindset individuals. These laboratory results demonstrate the benefits of growth mindset triggers which can be especially beneficial to reduce self-handicapping of young adults with more of a fixed mindset in educational settings.
Investigating the clinical implication of corneometer and mexameter readings towards objective, efficient evaluation of psoriasis vulgaris severity
Authors: Hsu Chao-Kai , Cheng Nan-Yu , Yang Chao-Chun , Yen Yun-Yo , Tseng Sheng-Hao 
Published: May 2022

AbstractIn clinical settings, although Psoriasis Area and Severity Index (PASI) scoring system can provide a quick visual assessment of the severity of psoriasis vulgaris, there is still a strong demand for higher efficiency and accuracy in quantifying the inflammation status of psoriatic lesions. Currently, there are already commercial systems, such as the Courage + Khazaka Corneometer and Mexameter that measure skin capacitance and optical reflectance, for conveniently quantifying the status of skin barrier function and erythema of skin. Despite numerous comparisons of the Courage + Khazaka system with the PASI scoring system, they are rarely compared on parity with diffuse reflectance spectroscopy (DRS) based systems. In this study, we employed a custom-built DRS system shown to be able to determine the skin water-protein binding status and the hemoglobin concentration, and we performed cross-validation of the DRS measurement results with the readings derived from the Corneometer and Mexameter as well as a portion of the PASI scores. Our results revealed that the erythema readings from the Mexameter were a good representation of skin oxygenated hemoglobin but not the deoxygenated hemoglobin. On the other hand, the dermatologists recruited in this study were inclined to rate higher scores on the “erythema” category as skin’s deoxygenated hemoglobin level was higher. Thus, the Mexameter derived erythema readings may not be coherent with the PASI erythema scores. Further, the Corneometer derived skin capacitance readings were well correlated to the PASI “desquamation” and “thickness” scores, while the PASI “desquamation” evaluation was a dominating factor contributing to the DRS deduced water-protein binding status. We conclude that the DRS method could be a valuable addition to existing skin capacitance/reflectance measurement systems and the PASI scoring system toward achieving a more efficient and objective clinical psoriasis vulgaris severity evaluation.
Investigation of role of CpG methylation in some epithelial mesenchymal transition gene in a chemoresistant ovarian cancer cell line
Authors: Alghamian Yaman , Soukkarieh Chadi , Abbady Abdul Qader , Murad Hossam 
Published: May 2022

AbstractOvarian cancer is one of the lethal gynecologic cancers. Chemoresistance is an essential reason for treatment failure and high mortality. Emerging evidence connects epithelial-mesenchymal transition (EMT) like changes and acquisition of chemoresistance in cancers. Including EMT, DNA methylation influences cellular processes. Here, EMT-like changes were investigated in cisplatin-resistant A2780 ovarian cancer cells (A2780cis), wherein role of DNA methylation in some EMT genes regulations was studied. Cell viability assay was carried out to test the sensitivity of A2780, and A2780cis human cancer cell lines to cisplatin. Differential mRNA expression of EMT markers using qPCR was conducted to investigate EMT like changes. CpG methylation role in gene expression regulation was investigated by 5-azacytidine (5-aza) treatment. DNA methylation changes in EMT genes were identified using Methylscreen assay between A2780 and A2780cis cells. In order to evaluate if DNA methylation changes are causally underlying EMT, treatment with 5-aza followed by Cisplatin was done on A2780cis cells. Accordingly, morphological changes were studied under the microscope, whereas EMT marker’s gene expression changes were investigated using qPCR. In this respect, A2780cis cell line has maintained its cisplatin tolerance ability and exhibits phenotypic changes congruent with EMT. Methylscreen assay and qPCR study have revealed DNA hypermethylation in promoters of epithelial adhesion molecules CDH1 and EPCAM in A2780cis compared to the cisplatin-sensitive parental cells. These changes were concomitant with gene expression down-regulation. DNA hypomethylation associated with transcription up-regulation of the mesenchymal marker TWIST2 was observed in the resistant cells. Azacytidine treatment confirmed DNA methylation role in regulating gene expression of CDH1, EPCAM and TWIST2 genes. A2780cis cell line undergoes EMT like changes, and EMT genes are regulated by DNA methylation. To that end, a better understanding of the molecular alterations that correlate with chemoresistance may lead to therapeutic benefits such as chemosensitivity restoration.
Downregulation of long non-coding RNAs in patients with bipolar disorder
Authors: Maloum Zahra , Ramezani Sahar , Taheri Mohammad , Ghafouri-Fard Soudeh , Shirvani-Farsani Zeinab 
Published: May 2022

AbstractThe abnormal function of signaling cascades is currently a candidate in the pathophysiology of bipolar disorder (BD). One of the factors involved in activating these signals is oxidative stress. Some long non-coding RNAs (lncRNA) are involved in the oxidative stress. In this study, we compared expression levels of lincRNA-p21, lincRNA-ROR, and lincRNA-PINT in the peripheral blood mononuclear cells (PBMC) from BD patients (n = 50) and healthy individuals (n = 50). Expression levels of lincRNA-p21, lincRNA-ROR, and lincRNA-PINT were significantly reduced in patients with BD compared to controls. In sex-based analyses, down-regulation of these lncRNAs was revealed only in male BD patients compared to male healthy subjects. Also, in BD patients, all three lncRNAs showed a significant pairwise positive correlation in expression level. The area under curve values for lincRNA-p21, lincRNA-ROR, and lincRNA-PINT was 0.66, 0.75, and 0.66, respectively. Thus, the ROC curve analysis showed that lncRNA-ROR might serve as a diagnostic biomarker for distinguishing between BD patients and controls. Altogether, the current study proposes a role for lincRNA-p21, lincRNA-ROR, and lincRNA-PINT in the pathogenesis of bipolar disorder. Moreover, the peripheral expression of these lncRNAs might be useful as potential biomarkers for BD.
IL-25 blockade augments antiviral immunity during respiratory virus infection
Authors: Williams Teresa C. , Loo Su-Ling , Nichol Kristy S. , Reid Andrew T. , Veerati Punnam C. , Esneau Camille , Wark Peter A. B. , Grainge Christopher L. , Knight Darryl A. , Vincent Thomas , Jackson Crystal L. , Alton Kirby , Shimkets Richard A. , Girkin Jason L. , Bartlett Nathan W. 
Published: May 2022

AbstractIL-25 is implicated in the pathogenesis of viral asthma exacerbations. However, the effect of IL-25 on antiviral immunity has yet to be elucidated. We observed abundant expression and colocalization of IL-25 and IL-25 receptor at the apical surface of uninfected airway epithelial cells and rhinovirus infection increased IL-25 expression. Analysis of immune transcriptome of rhinovirus-infected differentiated asthmatic bronchial epithelial cells (BECs) treated with an anti-IL-25 monoclonal antibody (LNR125) revealed a re-calibrated response defined by increased type I/III IFN and reduced expression of type-2 immune genes CCL26, IL1RL1 and IL-25 receptor. LNR125 treatment also increased type I/III IFN expression by coronavirus infected BECs. Exogenous IL-25 treatment increased viral load with suppressed innate immunity. In vivo LNR125 treatment reduced IL-25/type 2 cytokine expression and increased IFN-β expression and reduced lung viral load. We define a new immune-regulatory role for IL-25 that directly inhibits virus induced airway epithelial cell innate anti-viral immunity.
The MFN1 and MFN2 mitofusins promote clustering between mitochondria and peroxisomes
Authors: Huo Yinbo , Sun Weiping , Shi Tiezhu , Gao Song , Zhuang Min 
Published: May 2022

AbstractMitochondria and peroxisomes are two types of functionally close-related organelles, and both play essential roles in lipid and ROS metabolism. However, how they physically interact with each other is not well understood. In this study, we apply the proximity labeling method with peroxisomal proteins and report that mitochondrial protein mitofusins (MFNs) are in proximity to peroxisomes. Overexpression of MFNs induces not only the mitochondria clustering but also the co-clustering of peroxisomes. We also report the enrichment of MFNs at the mitochondria-peroxisome interface. Induced mitofusin expression gives rise to more mitochondria-peroxisome contacting sites. Furthermore, the tethering of peroxisomes to mitochondria can be inhibited by the expression of a truncated MFN2, which lacks the transmembrane region. Collectively, our study suggests MFNs as regulators for mitochondria-peroxisome contacts. Our findings are essential for future studies of inter-organelle metabolism regulation and signaling, and may help understand the pathogenesis of mitofusin dysfunction-related disease.
From motility-induced phase-separation to glassiness in dense active matter
Authors: Paoluzzi Matteo , Levis Demian , Pagonabarraga Ignacio 
Published: May 2022

AbstractDense active systems are widespread in nature, examples range from bacterial colonies to biological tissues. Dense clusters of active particles can be obtained by increasing the packing fraction of the system or taking advantage of a peculiar phenomenon named motility-induced phase separation (MIPS). In this work, we explore the phase diagram of a two-dimensional model of active glass and show that disordered active materials develop a rich collective behaviour encompassing both MIPS and glassiness. We find that, although the glassy state is almost indistinguishable from that of equilibrium glasses, the mechanisms leading to its fluidization do not have any equilibrium counterpart. Our results can be rationalized in terms of a crossover between a low-activity regime, where glassy dynamics is controlled by an effective temperature, and a high-activity regime, which drives the system towards MIPS.
Blood Pressure Levels and Maternal Outcome in Women with Preeclampsia – a Retrospective Study from a Large Tertiary Obstetric Centre
Authors: Willy Daniela , Willy Kevin , Köster Helen-Ann , Braun Janina , Möllers Mareike , Sourouni Marina , Klockenbusch Walter , Schmitz Ralf , Oelmeier Kathrin 
Published: May 2022

Abstract
Introduction Patients with high blood pressure levels are at high risk for acute complications as well as serious long-term consequences. Women with preeclampsia often experience
very high blood pressure levels during pregnancy and postpartum and are also known to have a higher cardiovascular risk in later life.
Material and Methods In our single-centre retrospective cohort study, we analysed 158 pregnancies complicated by preeclampsia in regard to maternal outcome. We divided the patient
cohort into three subgroups according to the blood pressure levels during hospital stay.
Results Pre-existing arterial hypertension was significantly more common in patients with a hypertensive crisis (systolic blood pressure ≥ 180 mmHg and/or diastolic blood pressure
≥ 120 mmHg) during pregnancy than in patients with moderate or severe hypertension (p = 0.001). Women with a hypertensive crisis had an unfavourable outcome compared to women with lower
blood pressure levels. These women developed a HELLP-syndrome significantly more often (p = 0.013). Moreover, most of the women with a hypertensive crisis during pregnancy were still
hypertensive at hospital discharge (p = 0.004), even though they were administrated antihypertensive agents more often (p < 0.001) compared to women with lower blood pressure values.
Conclusion Preeclamptic women with hypertensive crises should be identified quickly and monitored closely to avoid further complications. Standardized follow-up programs are lacking,
but especially these patients seem to be at high risk for persistent hypertension and increased cardiovascular morbidity and therefore should receive specialist follow-up, including
hypertensiologists, cardiologists and gynaecologists. Large prospective trials are required for a better understanding of these interrelations and to develop a specific follow-up
program.