bluuebunny/crossref_metadata_2025_split huggingface dataset:
Deep learning‐based large‐scale named entity recognition for anatomical region of mammalian brain
Authors: Chai Xiaokang , Di Yachao , Feng Zhao , Guan Yue , Zhang Guoqing , Li Anan , Luo Qingming 
Published: May 2022

BackgroundImages of anatomical regions and neuron type distribution, as well as their related literature are valuable assets for neuroscience research. They are vital evidence and vehicles in discovering new phenomena and knowledge refinement through image and text big data. The knowledge acquired from image data generally echoes with the literature accumulated over the years. The knowledge within the literature can provide a comprehensive context for a deeper understanding of the image data. However, it is quite a challenge to manually identify the related literature and summarize the neuroscience knowledge in the large‐scale corpus. Thus, neuroscientists are in dire need of an automated method to extract neuroscience knowledge from large‐scale literature.MethodsA proposed deep learning model named BioBERT‐CRF extracts brain region entities from the WhiteText dataset. This model takes advantage of BioBERT and CRF to predict entity labels while training.ResultsThe proposed deep learning model demonstrated comparable performance against or even outperforms the previous models on the WhiteText dataset. The BioBERT‐CRF model has achieved the best average precision, recall, and F1 score of 81.3%, 84.0%, and 82.6%, respectively. We used the BioBERT‐CRF model to predict brain region entities in a large‐scale PubMed abstract dataset and used a rule‐based method to normalize all brain region entities to three neuroscience dictionaries.ConclusionsOur work shows that the BioBERT‐CRF model can be well‐suited for brain region entity extraction. The rankings of different brain region entities by their appearance in the large‐scale corpus indicate the anatomical regions that researchers are most concerned about.
Problemy etyczne niejawnej obserwacji uczestniczącej. Perspektywa antropologów społeczno-kulturowych i socjologów
Authors: Surmiak Adrianna 
Published: May 2022

W niejawnej obserwacji uczestniczącej badacz/ka celowo zataja prowadzenie badań i/lub swoją badawczą tożsamość przed jej uczestnikami. Wywołuje to kontrowersje etyczne w środowisku naukowym, między innymi z powodu braku świadomej i dobrowolnej zgody na udział w badaniu. Zapisy zawarte w anglosaskich kodeksach etyki antropologa sugerują nieetyczność takiego sposobu pozyskiwania danych, chyba że badania odbywają się w sferze publicznej lub gdy ujawnienie się badacza/ki zagrażałoby czyjemuś życiu. Z kolei Kodeks etyki socjologa Polskiego Towarzystwa Socjologicznego (2012) przyzwala na badania ukryte na zasadzie wyjątku, gdy istnieją ku temu przesłanki metodologiczne. Niewiele jednak wiadomo o tym, jak badacze i badaczki oceniają taką praktykę pod względem etycznym. Na podstawie wywiadów pogłębionych z 56 antropologami i antropolożkami oraz socjologami i socjolożkami na temat etyki badań w praktyce badawczej analizuję, pod jakimi warunkami można usprawiedliwić przeprowadzenie niejawnej obserwacji uczestniczącej. Odpowiadam także na pytanie, czy opinie socjologów i socjolożek różnią się od opinii antropologów i antropolożek w tej sprawie.
Conventional and Biotechnological Approaches for Enhancing Shelf-life of Horticultural Crops: A Review
Authors: Adhikary Trina , Das Pankaj 
Published: May 2022

Background: Due to its highly perishable nature and less shelf life, postharvest losses of fruits result in a high gap between production and availability. Various plant traits which need to be genetically modified for higher shelf life include lowered respiration and ethylene production, less sensitivity to ethylene, lowering ripening rates, reduced browning, decreased chilling sensitivity and increased postharvest disease resistance.
Methods: The importance of understanding the biochemical process of softening and the use of such information for retarding the ripening process has been demonstrated in this paper.
Result: After reviewing the development made in extending the shelf life of fruits, it becomes evident that although success in this field has been inadequate, there are possibilities that fruit breeders will succeed in the near future in evolving superior cultivars with longer shelf life by adopting conventional and biotechnological approaches.
Perlindungan Terhadap SARS-CoV-2 Melalui Peningkatan Kesadaran dan Pengetahuan Masyarakat Terhadap Tanaman Obat Peningkat Imun
Authors: Komariah Komariah , Setyawati Andriyana , Sumani Sumani , Ariyanto Dwi Priyo , Yanti Yuli 
Published: May 2022

<p>Tanaman obat keluarga (disingkat TOGA) adalah tanaman hasil budidaya rumahan yang berkhasiat sebagai obat. Tanaman lokal dilengkapi dengan senyawa bioaktif, kandungan polifenol dan aktivitas antioksidan yang bervariasi. Adanya penurunan kesadaran masyarakat akan pentingnya menyediakan tanaman obat dipekarangan rumah mulai menurun. Pengetahuan akan tanaman obat pada masyarakat juga terbatas. Maka dari itu perlu adanya revitalisasi tanaman obat keluarga untuk menyadarkan kembali pentingnya menyediakan tanaman obat di lingkungan rumah atau apotek hidup yang bisa digunakan untuk menjaga kesehatan. Maka dari itu pengabdian ini bertujuan untuk meningkatkan kesadaran masyarakat dalam meningkatkan sistem kekebalan tubuh agar terhindar dari virus SARS- CoV-2 melalui revitalisasi tanaman obat keluarga. Berdasarkan hasil survey seluruh kelompok tani sering menggunakan tanaman obat, akan tetapi masih kesulitan untuk mengenali jenis tanaman obat yang bermanfaat bagi tubuh. Pengetahuan masyarakat kelompok tani 73% didapatkan dari nenek moyang/turun menurun. Melalui kegiatan ini juga ditekankan untuk tidak sembarangan dalam mengkonsumsi obat herbal, terutama jika tujuannya untuk pengobatan. Tujuan pengobatan, masyarakat disarankan tetap pergi ke dokter untuk mendapatkan diagnosa dan pengobatan dengan dosis yang tepat.</p>
A hybrid renewable energy production system using a smart controller based on fuzzy logic
Authors: Ali Moussa M. , Derrouazin A. , Latroch M. , Aillerie M. 
Published: May 2022

Introduction. This article proposes an improved energy management and optimization system with an intelligent economic strategy based on fuzzy logic technology with multiple inputs and outputs (I/O). It is used to control hybrid electric energy sources built around photovoltaic solar panels, wind turbine and electric energy storage system assisted by the electric grid. The novelty in this work that solar photovoltaic, wind turbine and storage system energy sources are prioritized over the grid network which is solicited only during adverse weather conditions, in order to supply a typical household using up to 4,000 Wh per day. In addition of that, the surplus of renewable energy produced during favorable climatic condition is used to produce hydrogen suitable for household heating and cooking using eletrolyzer system. Purpose. Development of improved energy management and optimization system with an intelligent economic strategy based on fuzzy logic technology. This system is embedded on Arduino 2560 mega microcontroller, on which the fundamental program of fuzzy logic and the distribution of events with all possible scenarios have been implemented according to a flowchart allowing the management of the hybrid system. Methods as well as a parametric search and a simulation to characterize the system, are carried out in order to put on the proposed techniques to ensure continuous accommodation at home. Results. The proposed system results confirm their effectiveness by visualizing the output control signals from the electronic switches. Practical value of which transmits power through a single-phase DC/AC converter to power the AC load for the accommodation.
Survey Tingkat Kebugaran Jasmani dan Faktor Yang Mempengaruhi Tingkat Kebugaran Jasmani Siswa Sekolah Menengah Pertama di Sidoarjo
Authors: Prianto David Agus , Utomo Maris Aka Satriyo , Abi Permana Dwinda Abi Permana , Mutohir Toho Cholik , Suroto  
Published: May 2022

Level kondisi kebugaran jasmani siswa di Indonesia masih dalam nilai rendah dimana sedikit kontribusi yang didapatkan dari mata pelajaran penjas di sekolah. Implementasi pembentukan karakter juga perlu dimunculkan dalam pendidikan jasmani. Tujuan dari penelitian ini adalah untuk melakukan survei tentang level kebugaran jasmani, faktor-faktor yang mempengaruhi kebugaran jasmani pada anak-anak. Subjek yang diteliti adalah anak Sekolah Menengah Pertama di Kabupaten Sidoarjo yang berusia 13-14 tahun.
Hasil penelitian ini dianalisis menggunakan persentasi dapat diketahui sebagai berikut: tingkat kesegaran jasmani pada siswa putra kelas VII adalah sebesar 57,14 % yaitu berada pada katagori sedang, kemudian pada siswa putri kelas VII sebesar 53,85 % yang mana masuk pada level kategori sedang. Naik ke tingkat siswa putra kelas VIII persentase paling besar yaitu 57,14 % pada katagori baik. Pada siswa putri kelas VIII persentase paling besar yaitu 70 % pada katagori sedang. Tingkat kesegaran jasmani pada siswa putra kelas IX jumlah persentase paling besar yaitu 50 % pada katagori sedang. Pada siswa putri kelas IX persentase paling besar yaitu 66,67 % pada katagori sedang. Kesimpulan bahwa tingkat kesegaran jasmani siswa kelas VII, VIII dan IX SMP di Kabupaten Sidoarjo rata-rata dalam katagori sedang, hal ini juga dipengaruhi oleh beberapa faktor meliputi faktor gizi, pola istirahat, kebiasaan hidup sehat, pengaruh gadget, dan faktor lingkungan.
Evaluation of Compacted Forage Feed on Kupang Cattle Feeding Behavior
Authors: Widjaya Fensa Eka , Despal Despal , Retnani Yuli , Priyanto Rudy , Abdullah Luki 
Published: May 2022

Forage compact feed has the ability to cut the adaptation period of grazing cattle when transported, because they are used to consume forage. The effect of the form and type of forage formulation on the feeding behavior of cattle needs to be studied further to determine the preferences of cattle for this compact feed. This study used 36 cattle with 3 replications in each treatment. The 2 factor groups withfactorial design consisting formulation and form of feed was applied in this study. The forms of feed used in this study were wafers, pellets, dried pellets, and cubes. The formulations used in this study were formulation 1 (10% molasses, 30% indigofera leaves, 50% straw, 10% elephant grass); formulation 2 (10% molasses, 30% indigofera leaves, 60% straw); formulation 3 (10% molasses, 20% indigofera leaves, 65% straw, 5% hemp). The parameters observed in this study were eating behavior of cattle which consisted of the frequency and duration of eating, drinking, rumination, and resting. The results showed that there wasan interaction on eating frequency and cattle duration. Formulation 3 on wafer treatment had the highest feeding frequency (P<0.05). Formulation 1 on wafer treatment had the highest duration of rumination (P<0.05). In the conclusion, Formulation 1 and 3 with wafer shape showed the best behavior for eating.
ICHNOLOGY OF MUDDY SHALLOW-WATER CONTOURITES FROM THE UPPER JURASSIC–LOWER CRETACEOUS VACA MUERTA FORMATION, ARGENTINA: IMPLICATIONS FOR TRACE-FOSSIL MODELS
Authors: PAZ MAXIMILIANO , MÁNGANO M. GABRIELA , BUATOIS LUIS A. , DESJARDINS PATRICIO R. , NOTTA RAÚL , TOMASSINI FEDERICO GONZÁLEZ , CARMONA NOELIA B. 
Published: May 2022

ABSTRACT
Contourites are increasingly being recognized in ancient fine-grained depositional environments. However, detailed ichnologic analyses focusing on shallow-water examples of these deposits are scarce. The Upper Jurassic–Lower Cretaceous Vaca Muerta Formation from Argentina constitutes an important unconventional reservoir that displays dm- to m-thick, laminated, rippled and bioturbated, crinoidal mudstone and fine to coarse mudstone deposited by wind- and thermohaline-driven contour currents. Four ichnofabrics were recognized in three facies associations. The Palaeophycus heberti ichnofabric is dominant in facies association 1, forming highly bioturbated intervals. The Palaeophycus heberti, Nereites isp., and Phycosiphon incertum ichnofabrics are present in facies association 2, displaying highly, moderately and sparsely bioturbated intervals, respectively. This association is locally characterized by m-thick successions comprising an upward decrease and then increase in bioturbation index, which may have a similar origin to bigradational sequences. The Equilibrichnia-Fugichnia ichnofabric mostly occurs in facies association 3 and less commonly in 2, forming distinctive bioturbated intervals within sparsely bioturbated successions. Benthic activity was controlled by food distribution, oxygenation, hydrodynamic energy, and water turbidity. Food was delivered to the surface or in suspension by currents, promoting deposit- or suspension-feeding strategies in the infauna, respectively. Oxygen levels increased during contour current activity yet remained relatively low (upper dysoxic). Hydrodynamic energy controlled bioturbation intensity, resulting in lower degrees of bioturbation during higher energy events. Suspension-feeding strategies suggest that water turbidity was relatively low during current transport. The herein example increases our understanding of environmental controls of shallow-water contour currents, supporting the fact that high bioturbation levels are typical of contourite deposits and providing an example of muddy contourites showing high preservation of sedimentary structures due to oxygen deficiency in bottom waters.
DYNAMICS OF DEPOSITION AND FOSSIL PRESERVATION AT THE EARLY EOCENE OKANAGAN HIGHLANDS OF BRITISH COLUMBIA, CANADA: INSIGHTS FROM ORGANIC GEOCHEMISTRY
Authors: LOWE ALEXANDER J. , DIEFENDORF AARON F. , SCHLANSER KRISTEN M. , SUPER JAMES , WEST CHRISTOPHER K. , GREENWOOD DAVID R. 
Published: May 2022

ABSTRACT
The early Eocene Okanagan Highland fossil sites of Washington (USA) and British Columbia (Canada) contain exquisitely preserved plant and insect fossils that showcase a critical time and place in the evolution of the Northern Hemisphere temperate deciduous biome. A comprehensive understanding of the dynamics of fossil deposition and preservation at these sites is not fully resolved but is critical for reliable reconstructions of these ancient forests. To expand on previous interpretations (e.g., deep, stratified, anoxic lake bottoms) and address uncertainties about the environment of deposition (e.g., distance to shore, influence of diatoms), we analyzed sediment samples from three Okanagan Highland fossil sites—McAbee, Falkland, and Driftwood Canyon—for organic biomarkers, their stable carbon isotopic compositions, and glycerol dialkyl glycerol tetraethers (GDGTs; at McAbee only). Terpenoids suggest relative trends in gymnosperm abundance between sites that agree with prior macrofossil evidence, though absolute values may overestimate local gymnosperm abundance. A combination of biomarker evidence indicates a predominantly autochthonous aquatic source (e.g., diatoms) for organic matter in shale and mudstone samples, even contributing to long chain n-alkanes and likely to branched GDGTs, which are often assumed to be terrestrially sourced. In combination with biomarker evidence for anoxia and stratification, fossiliferous shales are interpreted to have been deposited offshore in deep and mesotrophic lakes that were thermally stratified with an anoxic hypolimnion, away from in-flowing tributaries, while a coal horizon at Driftwood Canyon was deposited in a shallower, eutrophic, anoxic wetland. Anoxic conditions likely minimized some degradation-based biases and promoted high quality fossil preservation. Deposition of sediment and fossil remains offshore and away from inflowing tributaries suggest fossil plants were locally sourced but highlights the need for careful consideration of transport-induced biases.
New Grain Size and Petromagnetic Records from Lacustrine Sediments in the South of Southwestern East Siberia: Application for the Reconstruction of the Regional Environment in the Late Glacial and Holocene
Authors: Bezrukova E.V. , Krainov M.A. , Shchetnikov A.A. 
Published: May 2022

Abstract
—Bottom sediments of lakes are regarded as one of the most informative continental facies used to reconstruct environmental changes in lake catchments. They usually contain a high-resolution and continuous record of geologic events, the knowledge of which is important for understanding the evolution of sedimentary processes and landscapes under the influence of climatic changes and the impact of short-lived catastrophic processes. The southwestern Baikal region (the Tunka rift and its East Sayan mountain framing) is replete with lakes of different geneses and morphologies. Recent fieldworks have allowed a multiproxy study of the lacustrine sediments of several lakes of the Oka and Tunka regions. The results demonstrate that there were no glaciers in the foothill plain of the Tunka rift valley earlier than 14,800 cal yr BP. On the Oka plateau, within the East Sayan high-mountain zone, deglaciation started somewhat earlier than 13,800 cal yr BP. The grain size, petromagnetic, and physical properties of the lacustrine sediments point to a general weak hydrodynamics throughout the 13,800 yr sedimentation history in Lake Khikushka. However, a gradual reduction in fine fractions from base to top of the lake section suggests a gradual drawdown of the water level following the change of the water source from glacial melt waters to atmospheric precipitation. Biogenic silt accumulation in Lake Khikushka started parallel with the onset of the Holocene ~11,700 yr BP, suggesting a quick response of the natural environment of the lake basin to major global climatic changes. The short-term episodes of enhanced hydrodynamics in Lake Khikushka ~9000, 8200, 6500, and 2000 yr BP confirm the high sensitivity of the lake geosystem to climatic changes, not only on a millennial but also on a shorter-time scale. The characteristics of the sediments of Lake Engarginskoe are evident of lacustrine-alluvial sedimentation in the reservoir in the Early and Middle Holocene. New data on the grain size and petromagnetic parameters of the lacustrine sediments from two lakes located within different climatic belts of East Sayan show their high potential for a wide range of paleoecological reconstructions.
Tradisi Hukum Adat Pati Nyawa Lintas Etnis Melayu Islam dan Dayak Kabupaten Kapuas Hulu
Authors: Suprianto Bibi 
Published: May 2022

AbstractThis Malay customary law contains a set of rules or behavioral norms that have consequences if violated. This illustrates that customary law has big consequences if it is violated and opposed by the community. The implementation of the law is generally reflected in the dispute over the disputed land which ends with a fine, as happened in the customary law of Pati Nyawa Cross Ethnic Malay Islam and Dayak. This paper discusses the customary law tradition of Pati Nyawa Cross Ethnic Kapuas Hulu Regency. This paper aims to determine the purpose of the establishment of the Pati Nyawa customary law across ethnic Malay Islam and Dayak Kapuas Hulu Regency. This research uses descriptive-analytical method. The results of the analysis show that in customary law this symbolizes the symbol of maintaining village peace and community comfort as well as the laws described in various villages through customary law documents. The customary law covering the sub-district is about the customary law of politeness that must be obeyed by local people and immigrants who want to visit the place as well as a chapter on marriage which explains how the marriage process is, the conditions specified in marriage to be able to comply with village customs and regulations local. AbstrakHukum adat Melayu ini memuat seperangkat aturan atau norma berprilaku yang punya konsekuensi apabila dilanggar. Hal ini menggambarkan bahwasanya hukum adat mempunyai konsekuensi yang besar jika dilanggar dan ditentang oleh masyarakat. Pelaksanaan hukum tersebut secara umum tercermin dalam perebutan tanah sengketa yang diakhiri dengan denda sebagaimana yang terjadi pada hukum adat Pati Nyawa Lintas Etnis Melayu Islam dan Dayak. Makalah ini membahas tradisi hukum adat Pati Nyawa Lintas Etnis Kabupaten Kapuas Hulu. Tulisan ini bertujuan mengetahui maksud dibentuknya hukum adat Pati Nyawa Lintas Etnis Melayu Islam dan Dayak Kabupaten Kapuas Hulu. Penelitian ini menggunakan metode deskriptif-analitis. Hasil analisis menunjukkan dalam hukum adat ini melambangkan simbol menjaga ketentraman desa dan kenyamanan bermasyarakat dan juga hukum-hukum yang dijelaskan dalam berbagai desa melalui dokumen-dokumen hukum adat. Hukum adat yang meliputi Kecamatan tersebut tentang hukum adat kesopanan yang harus dipatuhi oleh orang setempat dan orang pendatang yang ingin berkunjung ke tempat tersebut serta bab tentang perkawinan yang menjelaskan tentang bagaimana proses perkawinan, syarat-syarat yang ditentukan dalam perkawinan untuk dapat mematuhi adat dan peraturan desa setempat.
Dissecting the microbial community structure of internal organs during the early postmortem period in a murine corpse model
Authors: Liu Ruina , Zhang Kai , Li Huan , Sun Qinru , Wei Xin , Li Huiyu , Zhang Siruo , Fan Shuanliang , Wang Zhenyuan 
Published: May 2022

Abstract
Background
Microorganisms distribute and proliferate both inside and outside the body, which are the main mediators of decomposition after death. However, limited information is available on the postmortem microbiota changes of extraintestinal body sites in the early decomposition stage of mammalian corpses.
Results
This study investigated microbial composition variations among different organs and the relationship between microbial communities and time since death over 1 day of decomposition in male C57BL/6J mice by 16S rRNA sequencing. During 1 day of decomposition, Agrobacterium, Prevotella, Bacillus, and Turicibacter were regarded as time-relevant genera in internal organs at different timepoints. Pathways associated with lipid, amino acid, carbohydrate and terpenoid and polyketide metabolism were significantly enriched at 8 hours than that at 0.5 or 4 hours. The microbiome compositions and postmortem metabolic pathways differed by time since death, and more importantly, these alterations were organ specific.
Conclusion
The dominant microbes differed by organ, while they tended toward similarity as decomposition progressed. The observed thanatomicrobiome variation by body site provides new knowledge into decomposition ecology and forensic microbiology. Additionally, the microbes detected at 0.5 hours in internal organs may inform a new direction for organ transplantation.