bluuebunny/crossref_metadata_2025_split huggingface dataset:
Experimental study of the quantification of indocyanine green fluorescence in ischemic and non-ischemic anastomoses, using the SERGREEN software program
Authors: Serra-Aracil X. , García-Nalda A. , Serra-Gómez B. , Serra-Gómez A. , Mora-López L. , Pallisera-Lloveras A. , Lucas-Guerrero V. , Navarro-Soto S. 
Published: July 2022

AbstractTissue ischemia is a key risk factor in anastomotic leak (AL). Indocyanine green (ICG) is widely used in colorectal surgery to define the segments with the best vascularization. In an experimental model, we present a new system for quantifying ICG fluorescence intensity, the SERGREEN software. Controlled experimental study with eight pigs. In the initial control stage, ICG fluorescence intensity was analyzed at the level of two anastomoses, in the right and in the left colon. Control images of the two segments were taken after ICG administration. The images were processed with the SERGREEN program. Then, in the experimental ischemia stage, the inferior mesenteric artery was sectioned at the level of the anastomosis of the left colon. Fifteen minutes after the section, sequential images of the two anastomoses were taken every 30 min for the following 2 h. At the control stage, the mean scores were 134.2 (95% CI 116.3–152.2) for the right colon and 147 (95% CI 134.7–159.3) for the left colon (p = 0.174) (Scale RGB—Red, Green, Blue). The right colon remained stable throughout the experiment. In the left colon, intensity fell by 47.9 points with respect to the pre-ischemia value (p < 0.01). After the first post-ischemia determination, the values of the ischemic left colon remained stable throughout the experiment. The relative decrease in ICG fluorescence intensity of the ischemic left colon was 32.6%. The SERGREEN program quantifies ICG fluorescence intensity in normal and ischemic situations and detects differences between them. A reduction in ICG fluorescence intensity of 32.6% or more was correlated with complete tissue ischemia.
Spatial–temporal evolution of ESV and its response to land use change in the Yellow River Basin, China
Authors: Yang Jie , Xie Baopeng , Zhang Degang 
Published: July 2022

AbstractThe value of ecosystem services, as well as their temporal and spatial characteristics, can be used to help areas develop focused and localized sustainable ecological management plans. Thus, this study conducted in the Yellow River Basin (YRB) of China, analyzed the ecosystem service value (ESV) and its spatial–temporal variation characteristics. This study used the equivalent factor and geospatial exploration methods, introduced the elasticity coefficient, and explored the response of ESV change to land-use change, based on the land use cover data from 1990 to 2020. The results showed that from 1990 to 2020, YRB ecosystem service value showed an overall increasing trend, mainly because the ecological construction project increased forest and grasslands in this region. In the past 30 years, spatial characteristics of ESV in YRB was relatively stable. The high-value areas were mainly distributed in the upper Yellow River Basin, while the low-value areas were mainly distributed in the lower Yellow River Basin, as the cold and hot spots were reduced. The ESV barycenter coordinates showed the direction of the transfer trajectory, which is first to southwest, northeast, and then to southwest. From 2000 to 2010, YRB land-use change had greater impact on ESV. Since 2010, the disturbance of ecosystem services by land-use change has decreased. Consequently, the elastic index of the upstream and Loess Plateau regions were significantly higher than that of other regions, and the impact of land-use change on ecosystem services was more obvious, due to improved large-scale ecological construction projects implementation. Conclusively, this study recommends the use of comprehensive spatial–temporal assessment of ESV for sustainable development and ecological protection in the YRB.
Atypical seasonal variability of the Kuroshio Current affected by intraseasonal signals at its origin based on direct mooring observations
Authors: Wang Fujun , Zhang Linlin , Feng Junqiao , Hu Dunxin 
Published: July 2022

AbstractThe spatial distribution and temporal variability of the Kuroshio Current (KC) was investigated with three moorings deployed at 122.7° E, 123° E, and 123.3° E along 18° N from January 2018 to the spring of 2020. It is shown that the core of the KC is located to the west of 122.7° E along 18° N. With the increase in longitude, the KC extended its vertical scale and attenuated its intensity gradually. The satellite data indicated that the KC was strongest in winter and spring, while it was weakest in autumn along 18° N. However, the seasonal cycle of the KC from mooring observations was atypical compared with that from the satellite data. The seasonal variation of the KC was not obvious in 2018, and a summer peak of KC occurred in 2019. The atypical seasonal variability of the KC was attributed to the strong intraseasonal signals generated by eddy activity. Eddies propagated from east and were enhanced to the west of 140° E, leading to the westward intensified intraseasonal signals. In addition, the intraseasonal signals varied interannually, that is why the variation of the KC in 2018 was quite different with that in 2019.
Portable magnetic resonance imaging of patients indoors, outdoors and at home
Authors: Guallart-Naval Teresa , Algarín José M. , Pellicer-Guridi Rubén , Galve Fernando , Vives-Gilabert Yolanda , Bosch Rubén , Pallás Eduardo , González José M. , Rigla Juan P. , Martínez Pablo , Lloris Francisco J. , Borreguero Jose , Marcos-Perucho Álvaro , Negnevitsky Vlad , Martí-Bonmatí Luis , Ríos Alfonso , Benlloch José M. , Alonso Joseba 
Published: July 2022

AbstractMobile medical imaging devices are invaluable for clinical diagnostic purposes both in and outside healthcare institutions. Among the various imaging modalities, only a few are readily portable. Magnetic resonance imaging (MRI), the gold standard for numerous healthcare conditions, does not traditionally belong to this group. Recently, low-field MRI technology companies have demonstrated the first decisive steps towards portability within medical facilities and vehicles. However, these scanners’ weight and dimensions are incompatible with more demanding use cases such as in remote and developing regions, sports facilities and events, medical and military camps, or home healthcare. Here we present in vivo images taken with a light, small footprint, low-field extremity MRI scanner outside the controlled environment provided by medical facilities. To demonstrate the true portability of the system and benchmark its performance in various relevant scenarios, we have acquired images of a volunteer’s knee in: (i) an MRI physics laboratory; (ii) an office room; (iii) outside a campus building, connected to a nearby power outlet; (iv) in open air, powered from a small fuel-based generator; and (v) at the volunteer’s home. All images have been acquired within clinically viable times, and signal-to-noise ratios and tissue contrast suffice for 2D and 3D reconstructions with diagnostic value. Furthermore, the volunteer carries a fixation metallic implant screwed to the femur, which leads to strong artifacts in standard clinical systems but appears sharp in our low-field acquisitions. Altogether, this work opens a path towards highly accessible MRI under circumstances previously unrealistic.
Dynamic back analysis of soil deformation during the construction of deep cantilever foundation pits
Authors: Zhang Jian , Qiao Guangxuan , Feng Tugen , Zhao Yihe , Zhang Chunbin 
Published: July 2022

AbstractField monitoring of foundation pits alone cannot predict the future deformation of retaining structures. Numerical simulations can predict the deformation of foundation pits and the working state of retaining structures to avoid the risk of foundation pit damage in advance. Accurate inversion of the soil parameters used for simulation and prediction is a key step. The associated multivariable problem is transformed into a single-variable problem by using the interval influence coefficient. Soil layer weightings and excavation step weightings are introduced and exploited to optimize the calculation process, and the soil parameters are calculated through inversion based on the least squares method. Based on actual engineering, the excavation sequence is regarded as a progressive sequence for back analysis, and the parameters of each soil layer are calculated through dynamic calculations with the excavation process in a cycle comprising inversion, prediction, reinversion and reprediction. The soil parameters after inversion are used to predict the maximum value and the depth of the deep horizontal displacement of the retaining structure, which verified the feasibility of the back-analysis method. Compared with the results before inversion, after the final inversion, t the overall error of section 2 is reduced by 67.24%, the overall error of section 3 is reduced by 40.5%, and the overall error of section 4 is reduced by 35%. The prediction curves are all close to the monitoring displacement curves, which plays a good guiding role and ensures the safe construction of the foundation pit. A new effective idea is proposed for the inverse analysis of the composite formation parameters of the deep foundation pit engineering.
Foveal eversion patterns in diabetic macular edema
Authors: Arrigo Alessandro , Saladino Andrea , Aragona Emanuela , Amato Alessia , Capone Luigi , Bianco Lorenzo , Lattanzio Rosangela , Bandello Francesco , Battaglia Parodi Maurizio 
Published: July 2022

AbstractThe aim of the present study was to describe foveal eversion patterns in diabetic macular edema (DME) and to assess their relationship with the course of the disease and the outcome. The study was designed as prospective, observational, with two years of follow-up. DME patients were divided in two groups, one treated by combined anti-VEGF injections and dexamethasone (DEX) implants, and the other treated by fluocinolone acetonide (FAc) implant with additional anti-VEGF retreatments if needed. Main outcome measures were foveal eversion prevalence, foveal eversion patterns, best-corrected visual acuity (BCVA), central macular thickness (CMT), structural OCT metrics, number of intravitreal injections. One hundred and forty-six eyes (146 patients; 80 males; mean age 67 ± 8 years) affected by already treated DME, with 84 eyes treated with anti-VEGF/DEX treatments (mean of 10 ± 3 injections) and 62 treated with FAc implant. Looking at the treatments administered before the inclusion into the study, 84 eyes (58%) were treated with anti-VEGF injections, whereas 62 eyes (42%) underwent a combination of anti-VEGF and corticosteroids implants. DME eyes showed statistically significant improvements of LogMAR BCVA and CMT over the 2-year follow-up. Foveal eversion was found in 83 eyes (57%), categorized as follows: Pattern 1a (16;19%); Pattern 1b (22;27%) and Pattern 2 (45;54%). BCVA improvement was detected in all the subgroups, excepting for Pattern 2, which showed also significantly worse structural OCT parameters. Pattern 1b and Pattern 2 were characterized by significantly higher prevalence of persistent DME (64% and 89% of cases, respectively). Foveal eversion patterns were correlated with progressively worse DME outcome. Foveal eversion may be associated to the loss of foveal homeostasis, with consequent poor response to intravitreal treatments and worse DME outcome.
The gut microbiome variability of a butterflyfish increases on severely degraded Caribbean reefs
Authors: Clever Friederike , Sourisse Jade M. , Preziosi Richard F. , Eisen Jonathan A. , Guerra E. Catalina Rodriguez , Scott Jarrod J. , Wilkins Laetitia G. E. , Altieri Andrew H. , McMillan W. Owen , Leray Matthieu 
Published: July 2022

AbstractEnvironmental degradation has the potential to alter key mutualisms that underlie the structure and function of ecological communities. How microbial communities associated with fishes vary across populations and in relation to habitat characteristics remains largely unknown despite their fundamental roles in host nutrition and immunity. We find significant differences in the gut microbiome composition of a facultative coral-feeding butterflyfish (Chaetodon capistratus) across Caribbean reefs that differ markedly in live coral cover (∼0–30%). Fish gut microbiomes were significantly more variable at degraded reefs, a pattern driven by changes in the relative abundance of the most common taxa potentially associated with stress. We also demonstrate that fish gut microbiomes on severely degraded reefs have a lower abundance of Endozoicomonas and a higher diversity of anaerobic fermentative bacteria, which may suggest a less coral dominated diet. The observed shifts in fish gut bacterial communities across the habitat gradient extend to a small set of potentially beneficial host associated bacteria (i.e., the core microbiome) suggesting essential fish-microbiome interactions may be vulnerable to severe coral degradation.
Structural determinants of DNA recognition by the NO sensor NsrR and related Rrf2-type [FeS]-transcription factors
Authors: Rohac Roman , Crack Jason C. , de Rosny Eve , Gigarel Océane , Le Brun Nick E. , Fontecilla-Camps Juan C. , Volbeda Anne 
Published: July 2022

AbstractSeveral transcription factors of the Rrf2 family use an iron-sulfur cluster to regulate DNA binding through effectors such as nitric oxide (NO), cellular redox status and iron levels. [4Fe-4S]-NsrR from Streptomyces coelicolor (ScNsrR) modulates expression of three different genes via reaction and complex formation with variable amounts of NO, which results in detoxification of this gas. Here, we report the crystal structure of ScNsrR complexed with an hmpA1 gene operator fragment and compare it with those previously reported for [2Fe-2S]-RsrR/rsrR and apo-IscR/hyA complexes. Important structural differences reside in the variation of the DNA minor and major groove widths. In addition, different DNA curvatures and different interactions with the protein sensors are observed. We also report studies of NsrR binding to four hmpA1 variants, which indicate that flexibility in the central region is not a key binding determinant. Our study explores the promotor binding specificities of three closely related transcriptional regulators.
Probing the evolution of electronic phase-coexistence in complex systems by terahertz radiation
Authors: Prajapati Gulloo Lal , Das Sarmistha , Dagar Rahul , Eswara Phanindra V. , Rana Dhanvir Singh 
Published: July 2022

AbstractIn complex oxides, electrons under the influence of competing energetics determine the coexistence or phase-separation of two or more electronic or magnetic phases within the same structural configuration. Probing the growth and evolution of such phase-coexistence state is crucial to determine the correct mechanism of related phase transition. Here, we demonstrate the combination of terahertz (THz) time-domain spectroscopy and DC transport as a strategy to probe the electronic phase-coexistence. This is demonstrated in disorder-controlled phase-separated rare-earth nickelate thin films, which exhibit a temperature induced metal-insulator transition in DC conductivity but lack this transition in THz dynamic conductivity. Such pronounced disparity exploits two extreme attributes, namely, the large sensitivity of THz radiation to a spatial range of the order of its wavelength-compatible electronic inhomogeneities, and its insensitivity to a range beyond the size of its wavelength. This feature is generic in nature, depending solely on the size of insulating and metallic clusters. Therefore, our strategy offers a high-sensitivity methodology to investigate electronic phase-coexistence and phase transition in a wide range of complex material systems.
Two billion registered students affected by stereotyped educational environments: an analysis of gender-based color bias
Authors: Santos Jário , Bittencourt Ig , Reis Marcelo , Chalco Geiser , Isotani Seiji 
Published: July 2022

AbstractAccording to the literature, educational technologies present several learning benefits to promote online education. However, there are several associated challenges, and some studies illustrate the limitations in elaborating educational technologies, called Design limitations. This aspect is responsible for unleashing various issues in the learning process, such as gender inequality, creating adverse effects on cognitive, motivational, and behavioral mediators, which opposes the fifth UN’s Sustainable Development Goal. Therefore, many studies notice the harmful effects of stereotypes in educational technologies. These effects can be included in the design, like colors or other stereotyped elements, or how the activity is conducted. Based on this, the present study aimed to verify the predominance of color bias in educational technologies available on the WEB. This study developed a computational solution to calculate male and female color bias in the available educational technology web pages. The results suggest the prevalence of the development of educational technologies with a male color bias, with an imbalance among genders, without adequate customization for age groups. Furthermore, some environments, such as Computer Science, present a higher color bias for men when compared to women. Despite both scales being independent, results indicated interesting evidence of a substantial prevalence of colors associated with the male scale. According to the literature, this may be associated with dropout and lack of interest in female students, especially in sciences, technology, engineering, and mathematics domains.
Detailed seed cone morpho-anatomy of the Prumnopityoid clade: an insight into the origin and evolution of Podocarpaceae seed cones
Authors: Khan Raees , Hill Robert S , Dörken Veit M , Biffin Ed 
Published: July 2022

AbstractBackground and AimsSeed cone traits are significant for understanding the evolutionary history of conifers. Podocarpaceae has fleshy cones with a distinct morphology compared with other conifers. However, we have a poor understanding of the seed cone morphology of the Prumnopityoid clade and within Podocarpaceae. This study presents detailed seed cone morpho-anatomy and the evolution of fleshy structures traits in the Prumnopityoid clade.MethodsWe investigated the detailed seed cone morpho-anatomy of selected species from the nine genera using the histological method. The evolution of morpho-anatomical traits was assessed using ancestral state reconstruction methods.Key ResultsThe Prumnopityoid clade has evolved fleshy seed cones using different functional structures (e.g. aril, epimatium, bracts or receptaculum) and fleshiness is an ancestral trait in the clade. An epimatium is present in all genera except Phyllocladus, but with different structural morphologies (e.g. a fleshy asymmetrical cup-like epimatium or an epimatium that is fused with the integument, forming a fleshy sarcotesta-like seed coat). In all species with fleshy sarcotesta-like seed coats, the endotesta is hard and woody, forming a sclerotesta-like structure and the epimatium and exotesta are fused, forming a fleshy sarcotesta-like structure.ConclusionsThis study highlights that the Prumnopityoid clade has an amazing diversity of structures and complex evolutionary patterns. Fleshiness is an ancestral trait of the clade and has been achieved via diverse evolutionary pathways and structures. This clade has four distinct seed cone types, i.e. drupe-like, receptaculate, arilloid and dacrydioid cones, based on morpho-anatomical structures and traits. The macrofossil record also demonstrates the presence of several structures and traits.
Phylogeography reveals the origin of the two phenological forms of large blue,Phengaris arion(Lepidoptera: Lycaenidae)
Authors: Bereczki Judit , Sielezniew Marcin , Verovnik Rudi , Beshkov Stoyan , Kuznetsov Gennadij , Bonelli Simona , Tóth János Pál 
Published: July 2022

AbstractOur main goal was to investigate the phylogeography of the butterfly Phengaris arion to reveal the evolutionary origin of its ‘spring’ and ‘summer’ forms. Molecular analyses based on highly variable microsatellites, together with Wolbachia screening, were carried out on 34 populations in Europe. We found three well-defined genetic lineages of different origins: the Apennine, the central and the eastern. The highly distinct Apennine lineage is limited by the Alps and evaluated as an Evolutionary Significant Unit (ESU). Therefore, the taxon name ligurica, described from the Ligurian coast (Italy), should not be applied to denote the ‘summer form’ of the Pannonian region. The central lineage is limited by the Carpathians and the most eastern ranges of the Alps, and lacks major range fluctuations related to glaciations, although there is evidence for extra-Mediterranean refugia in the Carpathian Basin. The eastern clade could have had refugia in central Asia. Our results exclude the potential allopatric origin of the ‘spring’ and ‘summer’ arion, and support the hypothesis that the existence of the two forms could be a result of local adaptation to the distinctive phenology of host plant flowering which is manifested in the genetic differences between them. Wolbachia infection has been ruled out as a driver of sympatric speciation in P. arion.
Inflammatory Bowel Disease and Pain Interference: A Conceptual Model for the Role of Insomnia, Fatigue, and Pain Catastrophizing
Authors: Falling Carrie L , Siegel Corey A , Salwen-Deremer Jessica K 
Published: July 2022

Abstract

Background
People with inflammatory bowel disease (IBD) commonly experience pain influenced by complex interactions among factors, including disease activity, sleep, psychopathology, and changes in pain processing pathways. Treatments for pain in IBD are limited, highlighting the need for research that explores modifiable factors linked to pain. The aim of this study was to investigate relationships among multiple patient factors and to construct a conceptual model for pain interference in IBD.

Methods
A cross-sectional survey of adults with IBD. Study domains included demographic, comorbidity, psychological, IBD, insomnia, fatigue, and pain features. Structural equation modeling (SEM) was used to examine relationships and interactions among active IBD, insomnia, fatigue, pain experiences (severity, catastrophizing, and interference), and additional patient factors (demographics and psychological).

Results
One hundred and seventy-four participants, aged 18–85 years, reported the presence of pain. Combining the questionnaire data using SEM resulted in a final model with an excellent fit (χ2(8) = 9.579, P = .297, χ2/N = 1.197, CFIN = 0.997, TLI = 0.987, RMSEA = 0.034). The presence of anxiety and depression was the additional patient factors to be retained in the path analysis. SEM results indicated that greater pain interference was directly influenced by greater fatigue, worse pain catastrophizing, and worse pain severity. Pain interference was indirectly impacted by IBD activity, worse insomnia, and the presence of depression and anxiety.

Conclusions
The proposed conceptual model highlights the role of multiple potentially modifiable factors, including insomnia, pain catastrophizing, and fatigue, contributing to worse pain interference in people with IBD.