bluuebunny/crossref_metadata_2025_split huggingface dataset:
Early changes to retinal structure in patients with diabetic retinopathy as determined by ultrawide swept-source optical coherence tomography-angiography
Authors: Zeng Yong , Liu Miao , Li Mengyu , Wei Dinyang , Mao Mingzhu , Liu Xinyue , Chen Sizhu , Liu Yang , Chen Bo , Yang Lei , Liu Sanmei , Qiao Lifeng , Zhang Ruifan , Li Jie , Dong Wentao , Zhong Jie 
Published: May 2023

PurposeTo investigate retinal vascular changes in patients with diabetic retinopathy (DR) using the newly developed ultrawide rapid scanning swept-source optical coherence tomography angiography (SS-OCTA) device.MethodsThis cross-sectional, observational study enrolled 24 patients (47 eyes) with DR, 45 patients (87 eyes) with diabetes mellitus (DM) without DR, and 36 control subjects (71 eyes). All subjects underwent 24 × 20 mm SS-OCTA examination. Vascular density (VD) and the thickness of the central macula (CM; 1 mm diameter) and temporal fan-shaped areas of 1–3 mm (T3), 3–6 mm (T6), 6–11 mm (T11), 11–16 mm (T16), and 16–21 mm (T21) were compared among groups. The VD and the thicknesses of the superficial vascular complex (SVC) and deep vascular complex (DVC) were analyzed separately. The predictive values of VD and thickness changes in DM and DR patients were evaluated by receiver operating characteristic (ROC) curve analysis.ResultsThe average VDs of the SVC in the CM and the T3, T6, T11, T16, and T21 areas were significantly lower in the DR than in the control group, whereas only the average VD of the SVC in the T21 area was significantly lower in the DM group. The average VD of the DVC in the CM was significantly increased in the DR group, whereas the average VDs of the DVC in the CM and T21 area were significantly decreased in the DM group. Evaluation of the DR group showed significant increases in the thicknesses of SVC-nourishing segments in the CM and T3, T6, and T11 areas and significant increases in the thicknesses of DVC-nourishing segments in the CM and T3 and T6 areas. In contrast, none of these parameters showed significant changes in the DM group. ROC curve analysis showed that the average VD of the SVC in the CM, T3, and T21 had better ability to predict DR, with areas under the ROC curves (AUCs) of 0.8608, 0.8505, and 0.8353, respectively. The average VD of the DVC in the CM was also predictive of DR, with an AUC of 0.8407.ConclusionsThe newly developed ultrawide SS-OCTA device was better able to reveal early peripheral retinal vascular changes than traditional devices.
Systematical assessment of digit ratio in a female masculinization disease: polycystic ovary syndrome
Authors: Yan Xueqi , Zhu Aiqing , Li Yexing , Yang Ziyi , Wang Yuteng , Liu Li , Liu Wei , Liu Dan , Li Fenghua , Du Juan , Cheng Fang , Gao Xueying , Zhao Junli 
Published: May 2023

BackgroundIn recent years, the right ratio of 2nd and 4th digit length (2D:4D) is regarded as an anatomical marker of prenatal testosterone exposure. Polycystic ovary syndrome (PCOS) is a female masculinized disease and is determined by prenatal testosterone exposure. Whether the ratio in the right hand of PCOS women is reduced or not compared with non-PCOS women is under debate. To further investigate the relationship between PCOS and digit ratio, we systematically measured all the digit ratios.MethodsWe recruited 34 non-PCOS women, 116 PCOS women, and 40 men and systematically measured all the ratios of digit length (2D:3D, 2D:4D, 2D:5D, 3D:4D, 3D:5D, and 4D:5D) of right hands and left hands.ResultsLeft 2D:3D, 2D:4D, and 2D:5D in men were significantly lower than those in non-PCOS women. Significantly lower digit ratios of left 2D:3D and 2D:4D were observed in PCOS compared with non-PCOS women. In the subgroup analysis, the left ratio of digit length in 2D:3D and 2D:5D of the hyperandrogenism subgroup was lower than that of the non-hyperandrogenism subgroup without statistical significance. The logistic regression model of PCOS revealed that 2D:3D, 2D:4D, 2D:5D, and 3D:4D of left hands were statistically related to the diagnosis of PCOS among all the digit ratios.ConclusionNot only 2D:4D but also other digit ratios, such as 2D:3D and 2D:5D, are a marker of prenatal testosterone exposure and may be an anatomical marker of PCOS. The majority of these significant differences included left 2D, with the following order: non-PCOS women &gt; PCOS women &gt; men.
Sporadic parathyroid adenoma: an updated review of molecular genetics
Authors: Chorti Angeliki , Cheva Angeliki , Chatzikyriakidou Anthoula , Achilla Charoula , Boulogeorgou Kassiani , Despoina Krokou , Milias Stefanos , Zarampoukas Thomas , Papavramidis Theodossis 
Published: May 2023

IntroductionPrimary HPT (PHPT) is a common disorder, affecting approximately 1% of the general population. Parathyroid adenomas emerge as non-familial sporadic in 90% of cases. The aim of this review is to give a detailed update of molecular genetics of sporadic parathyroid adenoma reported in international literature.MethodsA bibliographic research was conducted in PubMed, Google Scholar, and Scopus.ResultsSeventy-eight articles were included in our review. CaSR, MEN1, CCND1/PRAD, CDKI, angiogenic factors like VEGF, FGF, TGFβ, and IGF1, and apoptotic factors are important genes in parathyroid adenomas pathogenesis that have been established by several studies. A huge list of proteins is differently expressed in parathyroid adenomas measured by Western Blotting, MALDI/TOF, MS spectrometry, and immunohistochemistry. These proteins take part in several cell processes such as cell metabolism, cytoskeleton structural stability, cell oxidative stress regulation, cell death, transcription, translation, cell connection, and cell signaling transmission, while they can be found over- or underexpressed in abnormal tissues.ConclusionThis review gives a detailed analysis of all reported data on genomics and proteomics of parathyroid adenoma. Further studies should be applied on understanding parathyroid adenoma pathogenesis and introducing new biomarkers for early detection of primary hyperparathyroidism.
Axl promotes intracranial aneurysm rupture by regulating macrophage polarization toward M1 via STAT1/HIF-1α
Authors: Han Yongquan , Li Gaozhi , Zhang Zeyu , Zhang Xiaohua , Zhao Bing , Yang Hua 
Published: May 2023

BackgroundMacrophage infiltration and polarization are crucial for the pathogenesis of intracranial aneurysm (IA) rupture. Axl, a receptor tyrosine kinase, is involved in inflammation and efferocytosis in multiple organs. Upregulated soluble Axl in cerebrospinal fluid (CSF) and plasma is correlated with intracranial aneurysm rupture. This study aimed to investigate the role of Axl in IA rupture and macrophage polarization.MethodsMale C57BL/6J mice were used to induce IA. The level of Axl from control vessels and unruptured and ruptured IA samples was detected. In addition, the relationship between Axl and macrophages was confirmed. The pathway of Axl-mediated macrophage polarization was explored after IA induction in vivo and in bone marrow-derived macrophages (BMDMs) stimulated by LPS/IFN-γ in vitro. The animals were randomized into three groups and treated intraperitoneally with the vehicle, selective AXL antagonist R428, and recombinant mouse growth arrest-specific 6 (rmGas6) for 21 consecutive days. Then, we evaluated the influence of Axl on IA rupture by administrating R428 to inhibit or rmGas6 to activate the Axl receptor in vivo.ResultsCompared with that in normal vessels, Axl expression was significantly upregulated in unruptured IA samples. The ruptured IA tissue exhibited significantly higher expression of Axl than the unruptured IA tissue. Axl and F4/80 were coexpressed in IA tissue and LPS/IFN-γ-stimulated BMDMs. R428 treatment significantly reduced the rate of M1-like macrophage infiltration and IA rupture. In contrast, rmGas6 treatment promoted M1 macrophage infiltration and IA rupture. Mechanistically, R428 inhibited the phosphorylation of Axl and STAT1 and the expression of hypoxia-inducible factor-1α (HIF-1α) and decreased the levels of IL-1β, NOS2, and MMP9 in LPS/IFN-γ-stimulated BMDMs. rmGas6 promoted the phosphorylation of Axl and STAT1 and the expression of HIF-1α. In addition, STAT1 knockdown abolished Axl-mediated M1 macrophage polarization.ConclusionThe inhibition of Axl reduced macrophage polarization toward the M1 phenotype via the STAT1/HIF-1α signaling pathway and prevented IA rupture in mice. This finding suggests that pharmacological inhibition of Axl might be used to prevent the progression and rupture of IA.
Case Report: Ofatumumab treatment in a patient with rituximab-intolerant refractory autoimmune GFAP astrocytopathy
Authors: Cao Shugang , Du Jing , Pan Sidi , Zhang Juanjuan , Xu Si , Wei Ling , Tian Yanghua 
Published: May 2023

BackgroundOfatumumab, a fully humanized anti-CD20 monoclonal antibody, has shown promising efficacy in limited cases of neuromyelitis optica spectrum disorder, but there is a lack of studies on its use in autoimmune glial fibrillary acidic protein (GFAP) astrocytopathy. We present a case of refractory GFAP astrocytopathy with poor response to conventional immunosuppressants and rituximab who responded well to subcutaneous ofatumumab.Case reportThe patient is a 36-year-old woman with a diagnosis of GFAP astrocytopathy and high disease activity. She experienced five relapses over three years despite immunosuppressive treatment with oral prednisone, azathioprine, mycophenolate mofetil, and intravenous rituximab. Additionally, her circulating B cells were not completely depleted during the second administration of rituximab and an allergic reaction occurred. Based on insufficient B cell depletion and allergic reaction to rituximab, subcutaneous ofatumumab was introduced. After twelve injections of ofatumumab without injection-related reactions, she had no further relapses and was sufficiently depleted of the circulating B cells.DiscussionThis case illustrates the effective use and good tolerance of ofatumumab in GFAP astrocytopathy. Further studies are needed to investigate the efficacy and safety of ofatumumab in refractory GFAP astrocytopathy or those intolerant to rituximab.
An essential role of adenosine deaminase acting on RNA 1 in coeliac disease mucosa
Authors: Di Fusco Davide , Segreto Maria Teresa , Iannucci Andrea , Maresca Claudia , Franzè Eleonora , Di Maggio Giulia , Di Grazia Antonio , Boccanera Siro , Laudisi Federica , Marafini Irene , Paoluzi Omero Alessandro , Michienzi Alessandro , Monteleone Giovanni , Monteleone Ivan 
Published: May 2023

Background and aimType I interferons (IFNs) are highly expressed in the gut mucosa of celiac disease (CD) gut mucosa and stimulates immune response prompted by gluten ingestion, but the processes that maintain the production of these inflammatory molecules are not well understood. Adenosine deaminase acting on RNA 1 (ADAR1), an RNA-editing enzyme, plays a crucial role in inhibiting self or viral RNAs from activating auto-immune mediated responses, most notably within the type-I IFN production pathway. The aim of this study was to assess whether ADAR1 could contribute to the induction and/or progression of gut inflammation in patients with celiac disease.Material and methodsADAR1 expression was assessed by Real time PCR and Western blotting in duodenal biopsy taken from inactive and active celiac disease (CD) patients and normal controls (CTR). To analyze the role of ADAR1 in inflamed CD mucosa, lamina propria mononuclear cells (LPMC) were isolated from inactive CD and ADAR1 was silenced in with a specific antisense oligonucleotide (AS) and then incubated with a synthetic analogue of viral dsRNA (poly I:C). IFN-inducing pathways (IRF3, IRF7) in these cells were evaluated with Western blotting and inflammatory cytokines were evaluated with flow cytometry. Lastly, the role of ADAR1 was investigated in a mouse model of poly I:C-driven small intestine atrophy.ResultsReduced ADAR1 expression was seen in duodenal biopsies compared to inactive CD and normal controls. Ex vivo organ cultures of duodenal mucosal biopsies, taken from inactive CD patients, stimulated with a peptic-tryptic digest of gliadin displayed a decreased expression of ADAR1. ADAR1 silencing in LPMC stimulated with a synthetic analogue of viral dsRNA strongly boosted the activation of IRF3 and IRF7 and the production of type-I IFN, TNF-α and IFN-γ. Administration of ADAR1 antisense but not sense oligonucleotide to mice with poly I:C-induced intestinal atrophy, significantly increased gut damage and inflammatory cytokines production.ConclusionsThese data show that ADAR1 is an important regulator of intestinal immune homeostasis and demonstrate that defective ADAR1 expression could provide to amplifying pathogenic responses in CD intestinal mucosa.
Bioremediation of propylbenzenes by a novel marine microalga Rhinomonas reticulata S6A isolated from Daya Bay: acute toxicity, growth kinetics and biodegradation performance
Authors: Du Shuhao , Cui Jiali , Meng Fanping , Li Haiping , Cui Hongwu , Xia Yufan 
Published: May 2023

This study investigated the degradation characteristics of propylbenzenes (PBZs, including isopropylbenzene and n-propylbenzene), with high leakage risks and ecological hazards, by a newly isolated marine microalga named Rhinomonas reticulata S6A which is a promising candidate for eco-friendly bioremediation from marine. About 72% and 56% of n-PBZ and i-PBZ can be degraded after 7 days in culture. The acute toxicity of n-PBZ (96h - EC50 = 2.38 mg/L) was higher than that of i-PBZ (96h - EC50 = 3.65 mg/L). The growth inhibition kinetics of this strain were consistent with the Edwards model (R2 = 0.998) and Aiba model (R2 = 0.999). The optimal concentrations for the degradation of n-PBZ and i-PBZ were calculated to be 2.42 mg/L and 2.78 mg/L, respectively. The degradation trends of PBZs conformed to the zero-order kinetic model, and k increased with initial concentrations. The moderate increase in inoculation density could accelerate the degradation of PBZs, with the maximum specific growth rates (r) of 1.116/d (n-PBZ) and 1.230/d (i-PBZ) at the initial inoculation density of 104 cells/mL, while over-inoculation (initial microalgae density more than 105 cells/mL) was not conducive to the degradation of the pollutants. There is not much data on the biodegradation of PBZs in the aquatic environment, so it would be worthwhile to try to apply the new microalgae to explore the fate of PBZs.
Untargeted GC-MS and FT-NIR study of the effect of 14 processing methods on the volatile components of Polygonatum kingianum
Authors: Xu Yulin , Yang Meiquan , Yang Tianmei , Yang Weize , Wang Yuanzhong , Zhang Jinyu 
Published: May 2023

IntroductionPolygonatum kingianum is a traditional medicinal plant, and processing has significantly impacts its quality.MethodsTherefore, untargeted gas chromatography-mass spectrometry (GC-MS) and Fourier transform-near-infrared spectroscopy (FT-NIR) were used to analyze the 14 processing methods commonly used in the Chinese market.It is dedicated to analyzing the causes of major volatile metabolite changes and identifying signature volatile components for each processing method.ResultsThe untargeted GC-MS technique identified a total of 333 metabolites. The relative content accounted for sugars (43%), acids (20%), amino acids (18%), nucleotides (6%), and esters (3%). The multiple steaming and roasting samples contained more sugars, nucleotides, esters and flavonoids but fewer amino acids. The sugars are predominantly monosaccharides or small molecular sugars, mainly due to polysaccharides depolymerization. The heat treatment reduces the amino acid content significantly, and the multiple steaming and roasting methods are not conducive to accumulating amino acids. The multiple steaming and roasting samples showed significant differences, as seen from principal component analysis (PCA) and hierarchical cluster analysis (HCA) based on GC-MS and FT-NIR. The partial least squares discriminant analysis (PLS-DA) based on FT-NIR can achieve 96.43% identification rate for the processed samples.DiscussionThis study can provide some references and options for consumers, producers, and researchers.
Genome-wide association study presents insights into the genetic architecture of drought tolerance in maize seedlings under field water-deficit conditions
Authors: Chen Shan , Dang Dongdong , Liu Yubo , Ji Shuwen , Zheng Hongjian , Zhao Chenghao , Dong Xiaomei , Li Cong , Guan Yuan , Zhang Ao , Ruan Yanye 
Published: May 2023

IntroductionDrought stress is one of the most serious abiotic stresses leading to crop yield reduction. Due to the wide range of planting areas, the production of maize is particularly affected by global drought stress. The cultivation of drought-resistant maize varieties can achieve relatively high, stable yield in arid and semi-arid zones and in the erratic rainfall or occasional drought areas. Therefore, to a great degree, the adverse impact of drought on maize yield can be mitigated by developing drought-resistant or -tolerant varieties. However, the efficacy of traditional breeding solely relying on phenotypic selection is not adequate for the need of maize drought-resistant varieties. Revealing the genetic basis enables to guide the genetic improvement of maize drought tolerance.MethodsWe utilized a maize association panel of 379 inbred lines with tropical, subtropical and temperate backgrounds to analyze the genetic structure of maize drought tolerance at seedling stage. We obtained the high quality 7837 SNPs from DArT's and 91,003 SNPs from GBS, and a resultant combination of 97,862 SNPs of GBS with DArT's. The maize population presented the lower her-itabilities of the seedling emergence rate (ER), seedling plant height (SPH) and grain yield (GY) under field drought conditions.ResultsGWAS analysis by MLM and BLINK models with the phenotypic data and 97862 SNPs revealed 15 variants that were significantly independent related to drought-resistant traits at the seedling stage above the threshold of P &lt; 1.02 × 10-5. We found 15 candidate genes for drought resistance at the seedling stage that may involve in (1) metabolism (Zm00001d012176, Zm00001d012101, Zm00001d009488); (2) programmed cell death (Zm00001d053952); (3) transcriptional regulation (Zm00001d037771, Zm00001d053859, Zm00001d031861, Zm00001d038930, Zm00001d049400, Zm00001d045128 and Zm00001d043036); (4) autophagy (Zm00001d028417); and (5) cell growth and development (Zm00001d017495). The most of them in B73 maize line were shown to change the expression pattern in response to drought stress. These results provide useful information for understanding the genetic basis of drought stress tolerance of maize at seedling stage.
Hyperspectral Estimation of Nitrogen Content in Wheat Based on Fractional Difference and Continuous Wavelet Transform
Authors: Li Changchun , Li Xinyan , Meng Xiaopeng , Xiao Zhen , Wu Xifang , Wang Xin , Ren Lipeng , Li Yafeng , Zhao Chenyi , Yang Chen 
Published: May 2023

Nitrogen content is a crucial index for crop growth diagnosis and the exact estimation of nitrogen content is of great significance for grasping crop growth status in real-time. This paper takes winter wheat as the study object and the precision agriculture demonstration area of the Jiaozuo Academy of Agricultural and Forestry Sciences in Henan Province as the research area. The hyperspectral reflectance data of the wheat canopy in different growth periods are obtained with the ASD ground object hyperspectral instrument, and the original canopy spectral data are preprocessed by fractional differential and continuous wavelet transform; then, the vegetation indices are established, correlation analysis with nitrogen content is conducted, and the fractional differential spectra are selected; finally, based on the wavelet energy coefficient and the vegetation indices with strong correlations, the methods of support vector machine (SVM), ridge regression, stepwise regression, Gaussian process regression (GPR), and the BP neural network are used to construct the estimation model for nitrogen content in wheat at different growth stages. By adopting the R2 and root mean square error (RMSE) indices, the best nitrogen content estimation model at every growth stage is selected. The overall analysis of the nitrogen content estimation effect indicated that for the four growth periods, the maximum modeling and validation R2 of the nitrogen content estimation models of the SVM, ridge regression, stepwise regression, GPR, and BP neural network models reached 0.95 and 0.93, the average reached 0.76 and 0.71, and the overall estimation effect was good. The average values of the modeling and validation R2 of the nitrogen content estimation model at the flag picking stage were 0.85 and 0.81, respectively, which were 37.10% and 44.64%, 1.19% and 3.85%, and 14.86% and 17.39% higher than those at the jointing stage, flowering stage, and filling stage, respectively. Therefore, the model of the flag picking stage has higher estimation accuracy and a better estimation effect on the nitrogen content. For the different growth stages, the optimal estimation models of nitrogen content were different. Among them, continuous wavelet transform combined with the BP neural network model can be the most effective method for estimating the N content in wheat at the flagging stage. The paper provides an effective method for estimating the nitrogen content in wheat and a new idea for crop growth monitoring.
In Vitro Activity of Cefiderocol against Clinical Gram-Negative Isolates Originating from Germany in 2016/17
Authors: Wohlfarth Esther , Kresken Michael , Deuchert Fabian , Gatermann Sören G. , Pfeifer Yvonne , Pfennigwerth Niels , Seifert Harald , Higgins Paul G. , Werner Guido ,   Study Group ‘Antimicrobial Resistance‘ of the Paul Ehrlich Society for Infection Therapy
Published: May 2023

Antimicrobial resistance poses a global threat to public health. Of great concern are Acinetobacter baumannii, Pseudomonas aeruginosa and Enterobacterales with resistance to carbapenems or third-generation cephalosporins. The aim of the present study was to investigate the in vitro activity of the novel siderophore cephaloporin cefiderocol (CID) and four comparator β-lactam-β-lactamase-inhibitor combinations and to give insights into the genetic background of CID-resistant isolates. In total, 301 clinical Enterobacterales and non-fermenting bacterial isolates were selected for this study, including randomly chosen isolates (set I, n = 195) and challenge isolates (set II, n = 106; enriched with ESBL and carbapenemase producers, as well as colistin-resistant isolates). Isolates displayed CID MIC50/90 values of 0.12/0.5 mg/L (set I) and 0.5/1 mg/L (set II). Overall, the CID activity was superior to the comparators against A. baumannii, Stenotrophomonas maltophilia and set II isolates of P. aeruginosa. There were eight CID-resistant isolates detected (MIC > 2 mg/L): A. baumannii (n = 1), E. cloacae complex (n = 5) and P. aeruginosa (n = 2). Sequencing analyses of these isolates detected the acquired β-lactamase (bla) genes blaNDM-1, blaSHV-12 and naturally occurring blaOXA-396, blaACT-type and blaCMH-3. In conclusion, CID revealed potent activity against clinically relevant organisms of multidrug-resistant Enterobacterales and non-fermenters.