bluuebunny/crossref_metadata_2025_split huggingface dataset:
Increased tropical South Pacific western boundary current transport over the past century
Authors: Chen Wen-Hui , Ren Haojia , Chiang John C. H. , Wang You-Lin , Cai-Li Ren-Yi , Chen Yi-Chi , Shen Chuan-Chou , Taylor Frederick W. , DeCarlo Thomas M. , Wu Chau-Ron , Mii Horng-Sheng , Wang Xingchen Tony 
Published: June 2023

AbstractThe wind-driven meridional overturning circulation between the tropical and subtropical oceans is important for regulating decadal-scale temperature fluctuations in the Pacific Ocean and globally. An acceleration of the overturning circulation can act to reduce global surface temperature as ocean stores more heat. The equatorward low-latitude western boundary current represents a key component of the meridional circulation cell in the Pacific and a major source of water mass for the Equatorial Undercurrent, yet long-term observations of its transport are scarce. Here we demonstrate that the 15N/14N ratio recorded by Porites spp. corals in the western tropical South Pacific is sensitive to the exchanges of water masses driven by the western boundary transport. Using a 94-year coral record from the Solomon Sea, we report that the 15N/14N ratio declined as the global surface temperature rose. The record suggests that the South Pacific western boundary current has strengthened in the past century, and it may have contributed to the reported strengthening of the Equatorial Undercurrent. In addition, the 15N/14N record shows strong decadal variability, indicative of weaker equatorial Pacific upwelling and stronger western boundary transport when the eastern equatorial Pacific is in the warm stage of the Pacific Decadal Oscillation.
Multi-level analysis of the gut–brain axis shows autism spectrum disorder-associated molecular and microbial profiles
Authors: Morton James T. , Jin Dong-Min , Mills Robert H. , Shao Yan , Rahman Gibraan , McDonald Daniel , Zhu Qiyun , Balaban Metin , Jiang Yueyu , Cantrell Kalen , Gonzalez Antonio , Carmel Julie , Frankiensztajn Linoy Mia , Martin-Brevet Sandra , Berding Kirsten , Needham Brittany D. , Zurita María Fernanda , David Maude , Averina Olga V. , Kovtun Alexey S. , Noto Antonio , Mussap Michele , Wang Mingbang , Frank Daniel N. , Li Ellen , Zhou Wenhao , Fanos Vassilios , Danilenko Valery N. , Wall Dennis P. , Cárdenas Paúl , Baldeón Manuel E. , Jacquemont Sébastien , Koren Omry , Elliott Evan , Xavier Ramnik J. , Mazmanian Sarkis K. , Knight Rob , Gilbert Jack A. , Donovan Sharon M. , Lawley Trevor D. , Carpenter Bob , Bonneau Richard , Taroncher-Oldenburg Gaspar 
Published: June 2023

AbstractAutism spectrum disorder (ASD) is a neurodevelopmental disorder characterized by heterogeneous cognitive, behavioral and communication impairments. Disruption of the gut–brain axis (GBA) has been implicated in ASD although with limited reproducibility across studies. In this study, we developed a Bayesian differential ranking algorithm to identify ASD-associated molecular and taxa profiles across 10 cross-sectional microbiome datasets and 15 other datasets, including dietary patterns, metabolomics, cytokine profiles and human brain gene expression profiles. We found a functional architecture along the GBA that correlates with heterogeneity of ASD phenotypes, and it is characterized by ASD-associated amino acid, carbohydrate and lipid profiles predominantly encoded by microbial species in the genera Prevotella, Bifidobacterium, Desulfovibrio and Bacteroides and correlates with brain gene expression changes, restrictive dietary patterns and pro-inflammatory cytokine profiles. The functional architecture revealed in age-matched and sex-matched cohorts is not present in sibling-matched cohorts. We also show a strong association between temporal changes in microbiome composition and ASD phenotypes. In summary, we propose a framework to leverage multi-omic datasets from well-defined cohorts and investigate how the GBA influences ASD.
Iron homeostasis in full-term, normal birthweight Gambian neonates over the first week of life
Authors: Cross James H. , Jarjou Ousman , Mohammed Nuredin Ibrahim , Gomez Santiago Rayment , Touray Bubacarr J. B. , Kessler Noah J. , Prentice Andrew M. , Cerami Carla 
Published: June 2023

AbstractHuman neonates elicit a profound hypoferremia which may protect against bacterial sepsis. We examined the transience of this hypoferremia by measuring iron and its chaperone proteins, inflammatory and haematological parameters over the first post-partum week. We prospectively studied term, normal weight Gambian newborns. Umbilical cord vein and artery, and serial venous blood samples up to day 7 were collected. Hepcidin, serum iron, transferrin, transferrin saturation, haptoglobin, c-reactive protein, α1-acid-glycoprotein, soluble transferrin receptor, ferritin, unbound iron-binding capacity and full blood count were assayed. In 278 neonates we confirmed the profound early postnatal decrease in serum iron (22.7 ± 7.0 µmol/L at birth to 7.3 ± 4.6 µmol/L during the first 6–24 h after birth) and transferrin saturation (50.2 ± 16.7% to 14.4 ± 6.1%). Both variables increased steadily to reach 16.5 ± 3.9 µmol/L and 36.6 ± 9.2% at day 7. Hepcidin increased rapidly during the first 24 h of life (19.4 ± 14.4 ng/ml to 38.9 ± 23.9 ng/ml) and then dipped (32.7 ± 18.4 ng/ml) before rising again at one week after birth (45.2 ± 19.1 ng/ml). Inflammatory markers increased during the first week of life. The acute postnatal hypoferremia in human neonates on the first day of life is highly reproducible but transient. The rise in serum iron during the first week of life occurs despite very high hepcidin levels indicating partial hepcidin resistance.Trial Registration: clinicaltrials.gov (NCT03353051). Registration date: November 27, 2017.
A nationwide cross-sectional study on the association of patient-level factors with financial anxiety in the context of chronic medical conditions
Authors: Hassan Abbas M. , Chu Carrie K. , Liu Jun , Angove Rebekah , Rocque Gabrielle , Gallagher Kathleen D. , Momoh Adeyiza O. , Caston Nicole E. , Williams Courtney P. , Wheeler Stephanie , Offodile Anaeze C. 
Published: June 2023

AbstractPatient-level characteristics associated with the prevalence and severity of financial anxiety have yet to be described. We conducted a cross-sectional analysis of survey data assessing financial anxiety in patients with chronic medical conditions in December 2020. 1771 patients (42.6% response rate) participated in the survey. Younger age (19–35 age compared to ≥ 75 age) (β, 5.86; 95% CI 2.10–9.63), male sex (β, − 1.9; 95% CI − 3.1 to − 0.73), Hispanic/Latino race/ethnicity (compared with White patients) (β, 2.55; 95% CI 0.39–4.71), household size ≥ 4 (compare with single household) (β, 4.54; 95% CI 2.44–6.64), household income of ≥ $96,000-$119,999 (compared with ≤ $23,999) (β, − 3.2; 95% CI − 6.3 to 0.04), single marital status (compared with married) (β, 2.18; 95% CI 0.65–3.71), unemployment (β, 2.07; 95% CI 0.39–3.74), high-school education (compared with advanced degrees) (β, 3.10; 95% CI 1.32–4.89), lack of insurance coverage (compared with private insurance) (β, 6.05; 95% CI 2.66–9.45), more comorbidities (≥ 3 comorbidities compared to none) (β, 2.95; 95% CI 1.00–4.90) were all independently associated with financial anxiety. Patients who are young, female, unmarried, and representing vulnerable sub-populations are at elevated risk for financial anxiety.
Fe3O4@C@MCM41-guanidine core–shell nanostructures as a powerful and recyclable nanocatalyst with high performance for synthesis of Knoevenagel reaction
Authors: Barzkar Aliyeh , Beni Alireza Salimi 
Published: June 2023

AbstractIn this study, preparation, characterization and catalytic application of a novel core–shell structured magnetic with carbon and mesoporous silica shells supported guanidine (Fe3O4@C@MCM41-guanidine) are developed. The Fe3O4@C@MCM41-guanidine was prepared via surfactant directed hydrolysis and condensation of tetraethyl orthosilicate around Fe3O4@C NPs followed by treatment with guanidinium chloride. This nanocomposite was characterized by using Fourier transform infrared spectroscopy, vibrating sample magnetometry, scanning electron microscopy, transmission electron microscopy, energy dispersive X-ray spectroscopy, thermal gravimetric analysis, wide-angle X-ray diffraction and low-angle X-ray diffraction techniques. This nanocomposite have high thermal, chemical stability, and uniform size. Fe3O4@C@MCM41-guanidine catalyst demonstrated high yield (91–98%) to prepare of Knoevenagel derivatives under the solvent free conditions at room temperature in the shortest time. Also, this catalyst was recovered and reused 10 times without significant decrease in efficiency and stability. Fortunately, an excellent level of yield (98–82%) was observed in the 10 consecutive catalyst cycles.
Crystal chemical design, synthesis and characterisation of U(IV)-dominant betafite phases for actinide immobilisation
Authors: Sun Shi-Kuan , Mottram Lucy M. , Gouder Thomas , Stennett Martin C. , Hyatt Neil C. , Corkhill Claire L. 
Published: June 2023

AbstractCrystal chemical design principles were applied to synthesise novel U4+ dominant and titanium excess betafite phases Ca1.15(5)U0.56(4)Zr0.17(2)Ti2.19(2)O7 and Ca1.10(4)U0.68(4)Zr0.15(3)Ti2.12(2)O7, in high yield (85–95 wt%), and ceramic density reaching 99% of theoretical. Substitution of Ti on the A-site of the pyrochlore structure, in excess of full B-site occupancy, enabled the radius ratio (rA/rB = 1.69) to be tuned into the pyrochlore stability field, approximately 1.48 ≲ rA/rB ≲ 1.78, in contrast to the archetype composition CaUTi2O7 (rA/rB = 1.75). U L3-edge XANES and U 4f7/2 and U 4f5/2 XPS data evidenced U4+ as the dominant speciation, consistent with the determined chemical compositions. The new betafite phases, and further analysis reported herein, point to a wider family of actinide betafite pyrochlores that could be stabilised by application of the underlying crystal chemical principle applied here.
PET-validated EEG-machine learning algorithm predicts brain amyloid pathology in pre-dementia Alzheimer’s disease
Authors: Kim Nam Heon , Park Ukeob , Yang Dong Won , Choi Seong Hye , Youn Young Chul , Kang Seung Wan 
Published: June 2023

AbstractDeveloping reliable biomarkers is important for screening Alzheimer’s disease (AD) and monitoring its progression. Although EEG is non-invasive direct measurement of brain neural activity and has potentials for various neurologic disorders, vulnerability to noise, difficulty in clinical interpretation and quantification of signal information have limited its clinical application. There have been many research about machine learning (ML) adoption with EEG, but the accuracy of detecting AD is not so high or not validated with Aβ PET scan. We developed EEG-ML algorithm to detect brain Aβ pathology among subjective cognitive decline (SCD) or mild cognitive impairment (MCI) population, and validated it with Aβ PET. 19-channel resting-state EEG and Aβ PET were collected from 311 subjects: 196 SCD(36 Aβ +, 160 Aβ −), 115 MCI(54 Aβ +, 61Aβ −). 235 EEG data were used for training ML, and 76 for validation. EEG features were standardized for age and sex. Multiple important features sets were selected by 6 statistics analysis. Then, we trained 8 multiple machine learning for each important features set. Meanwhile, we conducted paired t-test to find statistically different features between amyloid positive and negative group. The best model showed 90.9% sensitivity, 76.7% specificity and 82.9% accuracy in MCI + SCD (33 Aβ +, 43 Aβ −). Limited to SCD, 92.3% sensitivity, 75.0% specificity, 81.1% accuracy (13 Aβ +, 24 Aβ −). 90% sensitivity, 78.9% specificity and 84.6% accuracy for MCI (20 Aβ +, 19 Aβ −). Similar trends of EEG power have been observed from the group comparison between Aβ + and Aβ −, and between MCI and SCD: enhancement of frontal/ frontotemporal theta; attenuation of mid-beta in centroparietal areas. The present findings suggest that accurate classification for beta-amyloid accumulation in the brain based on QEEG alone could be possible, which implies that QEEG is a promising biomarker for beta-amyloid. Since QEEG is more accessible, cost-effective, and safer than amyloid PET, QEEG-based biomarkers may play an important role in the diagnosis and treatment of AD. We expect specific patterns in QEEG could play an important role to predict future progression of cognitive impairment in the preclinical stage of AD. Further feature engineering and validation with larger dataset is recommended.
A diagnostic model for differentiating tuberculous spondylitis from pyogenic spondylitis: a retrospective case–control study
Authors: Liu Yu Xi , Lei Fei , Zheng Li Peng , Yuan Hao , Zhou Qing Zhong , Feng Da Xiong 
Published: June 2023

AbstractThe purpose of this study was to describe and compare the clinical data, laboratory examination and imaging examination of tuberculous spondylitis (TS) and pyogenic spondylitis (PS), and to provide ideas for diagnosis and treatment intervention. The patients with TS or PS diagnosed by pathology who first occurred in our hospital from September 2018 to November 2021 were studied retrospectively. The clinical data, laboratory results and imaging findings of the two groups were analyzed and compared. The diagnostic model was constructed by binary logistic regression. In addition, an external validation group was used to verify the effectiveness of the diagnostic model. A total of 112 patients were included, including 65 cases of TS with an average age of 49 ± 15 years, 47 cases of PS with an average of 56 ± 10 years. The PS group had a significantly older age than the TS group (P = 0.005). In laboratory examination, there were significant differences in WBC, neutrophil (N), lymphocyte (L), ESR, CRP, fibrinogen (FIB), serum albumin (A) and sodium (Na). The difference was also statistically significant in the comparison of imaging examinations at epidural abscesses, paravertebral abscesses, spinal cord compression, involvement of cervical, lumbar and thoracic vertebrae. This study constructed a diagnostic model, which was Y (value of TS > 0.5, value of PS < 0.5) = 1.251 * X1 (thoracic vertebrae involved = 1, thoracic vertebrae uninvolved = 0) + 2.021 * X2 (paravertebral abscesses = 1, no paravertebral abscess = 0) + 2.432 * X3 (spinal cord compression = 1, no spinal cord compression = 0) + 0.18 * X4 (value of serum A)−4.209 * X5 (cervical vertebrae involved = 1, cervical vertebrae uninvolved = 0)−0.02 * X6 (value of ESR)−0.806 * X7 (value of FIB)−3.36. Furthermore, the diagnostic model was validated using an external validation group, indicating a certain value in diagnosing TS and PS. This study puts forward a diagnostic model for the diagnosis of TS and PS in spinal infection for the first time, which has potential guiding value in the diagnosis of them and provides a certain reference for clinical work.
Estimation of maximal lactate steady state using the sweat lactate sensor
Authors: Muramoto Yuki , Nakashima Daisuke , Amano Tsubasa , Harita Tomota , Sugai Kazuhisa , Daigo Kyohei , Iwasawa Yuji , Ichihara Genki , Okawara Hiroki , Sawada Tomonori , Kinoda Akira , Yamada Yuichi , Kimura Takeshi , Sato Kazuki , Katsumata Yoshinori 
Published: June 2023

AbstractA simple, non-invasive algorithm for maximal lactate steady state (MLSS) assessment has not been developed. We examined whether MLSS can be estimated from the sweat lactate threshold (sLT) using a novel sweat lactate sensor for healthy adults, with consideration of their exercise habits. Fifteen adults representing diverse fitness levels were recruited. Participants with/without exercise habits were defined as trained/untrained, respectively. Constant-load testing for 30 min at 110%, 115%, 120%, and 125% of sLT intensity was performed to determine MLSS. The tissue oxygenation index (TOI) of the thigh was also monitored. MLSS was not fully estimated from sLT, with 110%, 115%, 120%, and 125% of sLT in one, four, three, and seven participants, respectively. The MLSS based on sLT was higher in the trained group as compared to the untrained group. A total of 80% of trained participants had an MLSS of 120% or higher, while 75% of untrained participants had an MLSS of 115% or lower based on sLT. Furthermore, compared to untrained participants, trained participants continued constant-load exercise even if their TOI decreased below the resting baseline (P < 0.01). MLSS was successfully estimated using sLT, with 120% or more in trained participants and 115% or less in untrained participants. This suggests that trained individuals can continue exercising despite decreases in oxygen saturation in lower extremity skeletal muscles.
Clinical efficacy and imaging analysis for the surgical treatment of thoracolumbar infections in elderly patients: a retrospective study
Authors: Zhong Yanlong , Tang Benyu , Zhang Zizhen , Sheng Yonghong , Li Chao , Guo Jia , Luo Shiwei , Yao Haoqun , Wan Zongmiao 
Published: June 2023

AbstractFew reports have been conducted to comparing surgical results and safety evaluations between the different types of infections in geriatric patients with thoracolumbar infections. The aim of this study is to investigate the safety and efficacy of surgical treatment for thoracolumbar infections in elderly patients. 21 patients with pyogenic spondylodiscitis (PS) and 26 patients with tuberculous spondylodiscitis (TS) were enrolled in the study. All patients were treated using one-stage posterior debridement, decompression, and pedicle screw fixation. Comparison of operative safety parameters between the two groups. Clinical efficacy was evaluated using visual analogue scale (VAS) score, the American Spinal Injury Association (ASIA) grade, the short form (SF)-36 survey and Oswestry disability index (ODI) to determine patient quality of life pre- and post-operatively. Hospitalisation and intensive care unit duration in the PS group were significantly shorter than in the TS group (P < 0.05). The total incidence of post-operative complications for both groups was 44.7%. More complications occurred in the TS group, but the difference was not significant. The scores of VAS, ODI and SF-36 of all 47 patients were significantly improved compared with those before operation.The VAS and SF-36 scores (physical component) were significantly better in the PS group 6 months post-operatively, and the SF-36 (mental component) scores were significantly better in the PS group at the 1-year follow-up. Neurological status in both groups improved post-operatively, and 83% of patients reported satisfactory results based on the modified MacNab standard. Imaging results showed that bone graft fusion improved in both groups at 6 months, 1 year and at the final follow-up. One-stage posterior debridement, decompression, interbody fusion, and internal fixation can be considered a safe and effective method of treating spinal infections in the elderly. This method can improve nerve function, reconstruct spinal stability, and enhance the quality of life of elderly patients. Both PS and TS who underwent surgery achieve similar clinical and radiological results.
Cooling-induced expansions of Afromontane forests in the Horn of Africa since the Last Glacial Maximum
Authors: Casas-Gallego Manuel , Hahn Karen , Neumann Katharina , Demissew Sebsebe , Schmidt Marco , Bodin Stéphanie C. , Bruch Angela A. 
Published: June 2023

AbstractUnderstanding the changing plant ecosystems that existed in East Africa over the past millennia is crucial for identifying links between habitats and past human adaptation and dispersal across the region. In the Horn of Africa, this task is hampered by the scarcity of fossil botanical data. Here we present modelled past vegetation distributions in Ethiopia from the Last Glacial Maximum (LGM) to present at high spatial and temporal resolution. The simulations show that, contrary to long-standing hypotheses, the area covered by Afromontane forests during the Late Glacial was significantly larger than at present. The combined effect of low temperatures and the relative rainfall contribution sourced from the Congo Basin and Indian Ocean, emerges as the mechanism that controlled the migration of Afromontane forests to lower elevations. This process may have enabled the development of continuous forest corridors connecting populations that are currently isolated in mountainous areas over the African continent. Starting with the Holocene, the expansion of forests began to reverse. This decline intensified over the second half of the Holocene leading to a retreat of the forests to higher elevations where they are restricted today. The simulations are consistent with proxy data derived from regional pollen records and provide a key environmental and conceptual framework for human environmental adaptation research.
Amino acid positions near the active site determine the reduced activity of human ACOD1 compared to murine ACOD1
Authors: Chen Fangfang , Yalcin Israfil , Zhao Mingming , Chen Chutao , Blankenfeldt Wulf , Pessler Frank , Büssow Konrad 
Published: June 2023

Abstractcis-Aconitate decarboxylase (ACOD1, IRG1) converts cis-aconitate to the immunomodulatory and antibacterial metabolite itaconate. Although the active site residues of human and mouse ACOD1 are identical, the mouse enzyme is about fivefold more active. Aiming to identify the cause of this difference, we mutated positions near the active site in human ACOD1 to the corresponding residues of mouse ACOD1 and measured resulting activities in vitro and in transfected cells. Interestingly, Homosapiens is the only species with methionine instead of isoleucine at residue 154 and introduction of isoleucine at this position increased the activity of human ACOD1 1.5-fold in transfected cells and 3.5-fold in vitro. Enzyme activity of gorilla ACOD1, which is almost identical to the human enzyme but has isoleucine at residue 154, was similar to the mouse enzyme in vitro. Met154 in human ACOD1 forms a sulfur-π bond to Phe381, which is positioned to impede access of the substrate to the active site. It appears that the ACOD1 sequence has changed at position 154 during human evolution, resulting in a pronounced decrease in activity. This change might have offered a selective advantage in diseases such as cancer.
Exploring the potential of Bornean polypore fungi as biological control agents against pathogenic Ganoderma boninense causing basal stem rot in oil palm
Authors: Darlis Darwana , Jalloh Mohamadu Boyie , Chin Clament Fui Seung , Basri Noor Khairani Mohamad , Besar Normah Awang , Ahmad Khairulmazmi , Rakib Mohd. Rashid Mohd. 
Published: June 2023

AbstractBasal stem rot due to a fungal pathogen, Ganoderma boninense, is one of the most devastating diseases in oil palm throughout the major palm oil producer countries. This study investigated the potential of polypore fungi as biological control agents against pathogenic G. boninense in oil palm. In vitro antagonistic screening of selected non-pathogenic polypore fungi was performed. Based on in planta fungi inoculation on oil palm seedlings, eight of the 21 fungi isolates tested (GL01, GL01, RDC06, RDC24, SRP11, SRP12, SRP17, and SRP18) were non-pathogenic. In vitro antagonistic assays against G. boninense revealed that the percentage inhibition of radial growth (PIRG) in dual culture assay for SRP11 (69.7%), SRP17 (67.3%), and SRP18 (72.7%) was relatively high. Percentage inhibition of diameter growth (PIDG) in volatile organic compounds (VOCs) in dual plate assay of SRP11, SRP17, and SRP18 isolates were 43.2%, 51.6%, and 52.1%, respectively. Molecular identification using the internal transcribed spacer gene sequences of SRP11, SRP17, and SRP18 isolates revealed that they were Fomes sp., Trametes elegans, and Trametes lactinea, respectively.