bluuebunny/crossref_metadata_2025_split huggingface dataset:
A critical review of anisakidosis cases occurring globally
Authors: Shamsi Shokoofeh , Barton Diane P. 
Published: May 2023

AbstractA review was conducted to identify the most common causative agents of anisakidosis, the methods used for identification of the causative agents, and to summarize the sources of infection, and patients’ demographics. A total of 762 cases (409 articles, inclusive of all languages) were found between 1965 and 2022. The age range was 7 months to 85 years old. Out of the 34 countries, Japan, Spain, and South Korea stood out with the highest number of published human cases of anisakidosis, respectively. This raises the question: Why are there few to no reports of anisakidosis cases in other countries, such as Indonesia and Vietnam, where seafood consumption is notably high? Other than the gastrointestinal tract, parasites were frequently found in internal organs such as liver, spleen, pancreas, lung, hiatal and epigastric hernia, and tonsils. There are also reports of the worm being excreted through the nose, rectum, and mouth. Symptoms included sore throat, tumor, bleeding, gastric/epigastric/abdominal/substernal/lower back/testicular pain, nausea, anorexia, vomiting, diarrhea, constipation, intestinal obstruction, intussusception, blood in feces, hematochezia, anemia, and respiratory arrest. These appeared either immediately or up to 2 months after consuming raw/undercooked seafood and lasting up to 10 years. Anisakidosis commonly mimicked symptoms of cancer, pancreatitis, type I/II Kounis syndrome, intussusception, Crohn’s disease, ovarian cysts, intestinal endometriosis, epigastralgia, gastritis, gastroesophageal reflux disease, hernia, intestinal obstruction, peritonitis, and appendicitis. In these cases, it was only after surgery that it was found these symptoms/conditions were caused by anisakids. A range of not only mainly marine but also freshwater fish/shellfish were reported as source of infection. There were several reports of infection with >1 nematode (up to >200), more than one species of anisakids in the same patient, and the presence of L4/adult nematodes. The severity of symptoms did not relate to the number of parasites. The number of anisakidosis cases is grossly underestimated globally. Using erroneous taxonomic terms, assumptions, and identifying the parasite as Anisakis (based solely on the Y-shaped lateral cord in crossed section of the parasite) are still common. The Y-shaped lateral cord is not unique to Anisakis spp. Acquiring a history of ingesting raw/undercooked fish/seafood can be a clue to the diagnosis of the condition. This review emphasizes the following key points: insufficient awareness of fish parasites among medical professionals, seafood handlers, and policy makers; limited availability of effective diagnostic methodologies; and inadequate clinical information for optimizing the management of anisakidosis in numerous regions worldwide.
Neogene and Quaternary dikes and related joints as conduits for recent juvenile degassing: case studies from the seismically active region of NW-Bohemia, Czech Republic
Authors: Heinicke J. , Woith H. , Alexandrakis-Zieger C. , Buske S. , Käppler R. , Krentz O. , Menzel P. 
Published: May 2023

AbstractThe contemporary occurrence of juvenile gas emissions at springs or mofettes in active volcanic areas can be observed worldwide. This correlation is less frequent in areas with dormant or post-volcanic activity. The NW-Bohemia/Vogtland region located at the Eger rift zone (Czech Republic) provides an intriguing example of this correlation between numerous Neogene-aged post-volcanism locations and juvenile fluid emission sites. Newly discovered dikes and diatremes are located close to vents with the highest helium isotope ratios (3He/4He) of about 6 Ra. Our results lend support to the hypothesis that feeder dikes and their fractured wall rocks should be considered the predominant conduits for the continuous upwelling of juvenile fluids. Moreover, 77% of the CO2 gas emission sites are located close to dikes or diatremes, i.e., within a distance of 4 km. Our studies reveal a spatial dependence of the Ra values at the spring sites with the estimated distances to the basaltic bodies. The results confirm the negative trend known from the literature. That is, Ra values decrease with increasing distance from the feeder dikes.
Does the fundamental host range of Trissolcus japonicus match its realized host range in Europe?
Authors: Haye Tim , Moraglio Silvia T. , Tortorici Francesco , Marazzi Cristina , Gariepy Tara D. , Tavella Luciana 
Published: May 2023

AbstractUnintentional introduction of natural enemies has increased in recent years due to a massive rise in global trade and tourism. One such natural enemy is the Asian egg parasitoid Trissolcus japonicus, a promising agent for classical biological control of Halyomorpha halys. In Europe, adventive T. japonicus populations have been detected in Switzerland, Italy and Germany. Host specificity testing demonstrated that its fundamental host range is fairly broad; however, it is unclear whether spatial or temporal refuges reduce parasitism of non-target species in the field. To address this, the realized host range of T. japonicus was assessed over three years by exposing sentinel egg masses of H. halys and 18 non-target species and collecting naturally laid egg masses in Switzerland and Italy. In total, 15 of 18 non-target species were successfully parasitized by T. japonicus in the field, confirming its broad fundamental host range. However, most non-target species were less parasitized by T. japonicus than H. halys, profiting from either partial temporal or spatial refuges from parasitism. Species with an unusual life cycle and the same ecological niche as H. halys, such as Pentatoma rufipes, which was the most parasitized non-target species in both countries, potentially face an increased risk of parasitism. In contrast, beneficial non-target effects may occur for the invasive pest, Nezara viridula, which suffered high non-reproductive mortality induced by T. japonicus. In both cases, life table studies will be needed to determine the impact of non-target parasitism and the potential consequences at the population level.
An assessment of vegetation mapping scale for reserve management: does scale of assessment dominate assessment outcomes?
Authors: Tierney D. A. 
Published: May 2023

AbstractScale is a critical factor in biodiversity assessments; assessments at inappropriate scales can compromise assessments and drive poor management outcomes. A key dataset for many conservation reserves is a map of vegetation patterns. However, the appropriateness, scale and accuracy of mapped vegetation values is rarely assessed. This study assessed vegetation mapping undertaken at differing scales using two common competing methods. The aim was to assess map utility for management planning within an important conservation reserve (Mugii Murum-ban State Conservation Area—MSCA) integral to the globally significant Greater Blue Mountains World Heritage Area in eastern Australia. Mapping typical of a common modelling approach failed to detect six of 21 vegetation types within MSCA. These vegetation types are part of four rare and/or endangered ecosystems. Overall accuracy (66%) was lower than sub-regional scale mapping based on air photo interpretation (77%) backed by higher levels of field data and local knowledge. Thus higher levels of spatial attribution applied to the modelling was not associated with increased map accuracy, although accuracy varied largely among vegetation types. The modelled map product has a consistent methodology across the state of New South Wales and provides important context for sub-regional mapping, but proved inappropriate for reserve management planning.
Air pollution in Iran: The current status and potential solutions
Authors: Taghizadeh Farzaneh , Mokhtarani Babak , Rahmanian Nejat 
Published: May 2023

AbstractAir pollution has been integrated into global challenges over the last few years due to its negative impact on the health of human beings, increasing socio-economic risks, and its contribution to climate change. This study attempts to evaluate the current status of Iran’s air pollution with regard to the sources of emissions, control policies, and the health and climate consequences that have resulted through available data from monitoring stations reported in the literature, official documents, and previously published papers. Many large cities in Iran surpass the permissible concentration of air pollutants, particularly particulate matter, sulfur dioxide, black carbon, and ozone. Although regulations and policies are in place and enormous efforts are being made to address air pollution issues in the country, implementation and enforcement are not as effective as they could be. The significant challenges may be regarded as the inefficiency of regulation and supervision systems, the lack of air quality monitoring systems and technology, particularly in industrial cities rather than Tehran, and the lack of continual feedback and investigations on the efficiency of regulation. Providing such an up-to-date report can bring opportunities for international collaboration, which is essential in addressing air pollution worldwide. We suggest that a way forward could be more focused on conducting systematic reviews using scientometric methods to show an accurate picture and trend in air pollution and its association in Iran, implementing an integrated approach for both climate change and air pollution issues, collaborating with international counterparts to share knowledge, tools, and techniques.
What are stakeholder views and needs for achieving phosphorus sustainability?
Authors: Grieger Khara , Merck Ashton , Deviney Alison , Marshall Anna 
Published: May 2023

AbstractOur society depends on the effective management of phosphorus (P). Phosphorus is a key component of agricultural fertilizers to improve crop yields, and also plays a critical role in many industrial processes and consumer products. In the past decade, there have been numerous calls for innovative approaches to manage P more sustainably, as it is a nonrenewable resource that can adversely impact aquatic ecosystems from runoff and inefficiencies in P use. To develop more sustainable solutions that will ultimately be adopted, diverse stakeholder perspectives must be recognized, including those in industry, government, academia, non-governmental organizations, and other civil groups. This study responds to this need by identifying stakeholder views, needs, concerns, and challenges regarding P sustainability. An online survey was developed and deployed to individuals identified as P sustainability experts and professionals in the U.S. and abroad. Based on responses from 96 stakeholder participants from a range of sectors, areas of expertise, and geographies, we found that the vast majority of stakeholders considered current P use to be unsustainable and were very concerned about the ability to manage P sustainably. Stakeholder participants did not distinguish between urgent and long-term challenges, and perceived financial and regulatory issues to be of greatest importance. Stakeholder participants expressed a range of needs to improve P management systems, including improved management practices, new technologies, enhanced regulations, and better approaches for engagement. Outcomes from this work can help inform future research, engagement, and policy priorities to ensure sustainable P management solutions based on stakeholder-identified perspectives and needs.
Contextualizing inclusion policy: views from Jordanian special education teachers
Authors: Benson Sarah K. 
Published: May 2023

AbstractJordan’s 2017 Public Law No. 20, Rights of Persons with Disabilities Act has given rise to a renewed focus on inclusive education. Using a qualitative comparative case study design, the purpose of this study was to examine factors impacting how schools in Jordan are defining, interpreting and enacting inclusion. Four shadow teachers working in schools to promote inclusive education participated in interviews and weekly journaling prompts. Data were analyzed using cultural–historical activity theory (CHAT) and sensemaking. Results showed support for inclusion by the community when there are adequate resources and supportive administration. Additionally, the shadow teachers have taken on a progressive role as coaches to general education teachers, while promoting social inclusion. This study establishes the utility of CHAT and sensemaking in global research on inclusive practices. The results provide areas of strength in Jordanian schools that should be built on to increase inclusion of students with disabilities.
Non-uniform sampling of similar NMR spectra and its application to studies of the interaction between alpha-synuclein and liposomes
Authors: Shchukina Alexandra , Schwarz Thomas C. , Nowakowski Michał , Konrat Robert , Kazimierczuk Krzysztof 
Published: May 2023

AbstractThe accelerated acquisition of multidimensional NMR spectra using sparse non-uniform sampling (NUS) has been widely adopted in recent years. The key concept in NUS is that a major part of the data is omitted during measurement, and then reconstructed using, for example, compressed sensing (CS) methods. CS requires spectra to be compressible, that is, they should contain relatively few “significant” points. The more compressible the spectrum, the fewer experimental NUS points needed in order for it to be accurately reconstructed. In this paper we show that the CS processing of similar spectra can be enhanced by reconstructing only the differences between them. Accurate reconstruction can be obtained at lower sampling levels as the difference is sparser than the spectrum itself. In many situations this method is superior to “conventional” compressed sensing. We exemplify the concept of “difference CS” with one such case—the study of alpha-synuclein binding to liposomes and its dependence on temperature. To obtain information on temperature-dependent transitions between different states, we need to acquire several dozen spectra at various temperatures, with and without the presence of liposomes. Our detailed investigation reveals that changes in the binding modes of the alpha-synuclein ensemble are not only temperature-dependent but also show non-linear behavior in their transitions. Our proposed CS processing approach dramatically reduces the number of NUS points required and thus significantly shortens the experimental time.
Homing and Nest Recognition in Nocturnal Blue Petrels: What Scent May Attract Birds to their Burrows?
Authors: Zidat Timothée , Gabirot Marianne , Bonadonna Francesco , Müller Carsten T. 
Published: May 2023

AbstractHypogean petrels return to the same nest burrow to breed on remote islands during the summer months. Their nocturnal behavior at the colony, strong musky odor and olfactory anatomy suggest an important role of olfaction in homing behavior and nest recognition. Behavioral experiments showed that olfactory cues are sufficient to allow nest identification, suggesting a stabile chemical signature emanating from burrows and facilitating nest recognition. However, the chemical nature and sources of this odor remain unknown. To better understand the nest odor composition, we analyzed volatile organic compounds (VOCs) of nests of blue petrels (Halobaena caerulea) derived from three different odor sources: nest air, nest material and feather samples. We also compared, during two successive years, VOCs from burrows with an incubating breeder on the nest, and burrows used during the breeding season by blue petrels but shortly temporally unoccupied by breeders. We found that the nest air odor was mainly formed by the owners’ odor, which provided an individual chemical label for nests that appeared stabile over the breeding season. These findings, together with the previous homing behavioral studies showing an essential role of the sense of smell in blue petrels, strongly suggest that the scent emanating from burrows of blue petrels provides the information that facilitates nest recognition and homing.
Agricultural Intensification and the Evidence from Offsite Survey Archaeology
Authors: Bintliff John 
Published: May 2023

AbstractThe enhancement of crop yields through manuring has been attested since early farming prehistory in many parts of the world. This article reviews the history of research into the potential archaeological evidence for this practice in Europe, the Mediterranean lands and the Near East. The focus is on the interpretation of ceramic data recovered in surface field surveys conducted since 1950 and what sorts of activities may be plausibly inferred from them. The article examines the origins of the model, objections to it, and recent analyses which again strengthen it. A particular case-study analyses the evidence for the protohistoric and early historic periods in Greece. The methodological and empirical arguments tend to strongly reaffirm the importance of artificial manuring in agrarian regimes of all periods, and its significance in furthering understandings of economic and demographic history and prehistory.
Upper Secondary School Science Teachers' Values in Sweden:
Authors: Nordqvist Ola , Jidesjö Anders 
Published: May 2023

AbstractThere is a substantial literature in science education research showing that many students experience a lack of relevance in science education. For this reason, science teachers’ selection of content and the way content is treated when exposed to students for learning purposes is an important part of the problem. In this connection, research show that science teachers’ values strongly influence several aspects of teaching and learning science. Therefore, science teachers’ values are important to investigate, to be empirically informed and to be able to develop science education. Accordingly, there is an increased volume of research studies about teachers’ values in science education and their effects. The study presented here is part of a larger national exploration of biotechnology education in upper secondary schools in Sweden and contributes by showing variation in teachers’ values and relations with practice. Theoretically, the study is rooted in a philosophy of science recognizing the potential importance of teachers’ non-epistemic values. Empirically, it is based on surveyed upper secondary school biology teachers’ views of the importance of including value-laden topics in their science teaching. Their responses were analyzed by latent profile analysis and non-parametric testing, to assess the variation in their views and explore associations with several explanatory factors. The results show that the surveyed teachers could be divided into two distinct groups: one favoring inclusion of value-laden topics in their teaching and another (smaller group) opposed to it. The result also shows a variation in teachers’ selection of topics to teach and their teaching approach, as the former group were more inclined than the latter to include value-laden aspects in their teaching which contributes to the research literature. Furthermore, experienced science teachers were overrepresented in the group holding more negative views, a result not reported elsewhere in the research literature. The importance of the results is discussed in relation with the theoretical framing of non-epistemic values and points out the importance to further investigate underlying causes to science teachers’ expressed values and ways that they might vary temporally together with ways that they cluster, as they are shown to be grouped. The result is also discussed in relation with practice in being able to make use of the evidence to develop science education.
Frege on the introduction of real and complex numbers by abstraction and cross-sortal identity claims
Authors: Schirn Matthias 
Published: May 2023

AbstractIn this article, I try to shed new light on Frege’s envisaged definitional introduction of real and complex numbers inDie Grundlagen der Arithmetik(1884) and the status of cross-sortal identity claims with side glances atGrundgesetze der Arithmetik(vol. I 1893, vol. II 1903). As far as I can see, this topic has not yet been discussed in the context ofGrundlagen. I show why Frege’s strategy in the case of the projected definitions of real and complex numbers inGrundlagenis modelled on his definitional introduction of cardinal numbers in two steps, tentatively via a contextual definition and finally and definitively via an explicit definition. I argue that the strategy leaves a few important questions open, in particular one relating to the status of the envisioned abstraction principles for the real and complex numbers and another concerning the proper handling of cross-sortal identity claims.
PseudoSegRT: efficient pseudo-labelling for intraoperative OCT segmentation
Authors: Huang Yu , Asaria Riaz , Stoyanov Danail , Sarunic Marinko , Bano Sophia 
Published: May 2023

Abstract
Purpose
Robotic ophthalmic microsurgery has significant potential to help improve the success of challenging procedures and overcome the physical limitations of the surgeon. Intraoperative optical coherence tomography (iOCT) has been reported for the visualisation of ophthalmic surgical manoeuvres, where deep learning methods can be used for real-time tissue segmentation and surgical tool tracking. However, many of these methods rely heavily on labelled datasets, where producing annotated segmentation datasets is a time-consuming and tedious task.

Methods
To address this challenge, we propose a robust and efficient semi-supervised method for boundary segmentation in retinal OCT to guide a robotic surgical system. The proposed method uses U-Net as the base model and implements a pseudo-labelling strategy which combines the labelled data with unlabelled OCT scans during training. After training, the model is optimised and accelerated with the use of TensorRT.

Results
Compared with fully supervised learning, the pseudo-labelling method can improve the generalisability of the model and show better performance for unseen data from a different distribution using only 2% of labelled training samples. The accelerated GPU inference takes less than 1 millisecond per frame with FP16 precision.

Conclusion
Our approach demonstrates the potential of using pseudo-labelling strategies in real-time OCT segmentation tasks to guide robotic systems. Furthermore, the accelerated GPU inference of our network is highly promising for segmenting OCT images and guiding the position of a surgical tool (e.g. needle) for sub-retinal injections.