bluuebunny/crossref_metadata_2025_split huggingface dataset:
Long-term quality of life and nutritional results of stomach-preserving surgery after sentinel node evaluation in patients with early gastric cancer: A multicenter, randomized phase 3 trial (SENORITA).
Authors: Eom Bang Wool , Yoon Hong Man , Kim Young-Woo , Min Jae Seok , An Ji Yeong , Hur Hoon , Lee Young Joon , Cho Gyu Seok , Park Young-Kyu , Jung Mi Ran , Park Ji-Ho , Hyung Woo Jin , Jeong Sang-Ho , Kook Myeong-Cherl , Han Mira , Nam Byung-Ho , Ryu Keun Won 
Published: June 2023

4070 Background: In the SENORITA trial, laparoscopic sentinel node navigation surgery (LSNNS) showed no significant difference in overall and disease specific survivals compared with laparoscopic standard gastrectomy (LSG). Here, we present the effect of stomach preservation surgery on QoL and nutritional outcomes, and identify risk factors affecting QoL in stomach preservation surgery. Methods: SENORITA was a prospective multicenter randomized trial. Patients diagnosed with early gastric cancer of 3 cm or less were randomly allocated (1:1) to LSNNS or LSG. The primary endpoint was 3-year disease-free survival. This analysis focuses on long-term quality of life and nutritional outcomes of patients who finally underwent stomach-preservation surgery in the LSNNS group. QoL was assessed using the European Organization for Research and Treatment of Cancer Quality of Life Questionnaire Core 30 (EORTC QLQ-C30) and stomach module (STO22) at 3, 12, 24, and 36 months after surgery. Linear mixed model analyses were used to evaluate differences between treatment groups. This trial is registered with ClinicalTrials.gov, NCT01804998. Results: From March 2013 to March 2017, a total of 580 patients were randomly assigned in the SENROTA trial. Among them, 258 patients underwent sentinel node navigation surgery and 198 finally underwent stomach preservation surgery. QoL data was available in 194 patients and compared with those of 257 patients who underwent standard gastrectomy. The stomach-preservation group had better QoL in physical function, dyspnea, and appetite loss of C30 and dysphagia, pain, reflux symptoms, eating restriction, anxiety, taste change, body image, and total score of STO22. Regarding nutritional outcomes, body mass index, hemoglobin, protein, and albumin levels were significantly higher in the stomach-preservation group than in the gastrectomy group. In multivariate analyses, tumor location (greater curvature) was an independent favorable factor affecting global health status, reflux symptoms, eating restriction, and total score of STO22 at 3 months in the stomach-preservation group. Segmental resection was a risk factor for diarrhea and eating restriction at postoperative 3 year. Conclusions: The stomach-preservation surgery had better long-term QoL and nutritional outcomes compared with standard gastrectomy. These findings can help decision making about treatment for patients with early gastric cancer, especially or elderly or nutritionally high risk patients. Clinical trial information: NCT01804998 .
Response to programmed cell death protein 1 antibody in patients with Epstein-Barr virus-associated biliary tract cancer.
Authors: He Wen-Zhuo , Lin Han-Bin , Guo Gui-Fang , Xia Liang-Ping 
Published: June 2023

4071 Background: Epstein-Barr virus-associated biliary tract cancer (EBVaBTC) has a distinct genomic landscape and increased infiltration of CD3+ and CD8+ T cells. However, the efficacy of immunotherapy in EBVaBTC remains largely unknown. The aim of this study is to assess the efficacy of programmed cell death protein 1 (PD-1) antibody in EBVaBTC. Methods: Consecutive patients with metastatic biliary tract cancer diagnosed at our institution from January 2017 to December 2021 were identified. In situ hybridization was performed to detect EBV. The objective response to PD-1 antibody was assessed. We also analyzed the immune microenvironment of EBVaBTC by multiplex immunofluorescence staining, and performed the proteomic characterization of EBVaBTC. Results: A total of 131 patients with BTC who received PD-1 antibody were identified, of which 9 (6.9%) had EBVaBTC. All EBVaBTC cases were intrahepatic cholangiocarcinoma. EBVaBTC was not associated with deficient mismatch repair but with lymphoepithelioma-like carcinoma and hepatitis B virus infection. Four (44.4%) patients achieved a partial response, and the remaining five (55.6%) patients had stable disease. The response lasted for at least 12 months in 8 (88.9%) patients with EBVaBTC, including 4 patients received PD-1 antibody monotherapy. Blood EBV-DNA was detectable in all 9 patients (100%) with EBVaBTC. Multiplex immunofluorescence staining revealed more abundant CD3+ and CD8+ T cells infiltration in EBVaBTC than that of mismatch repair deficient BTC. A total of 8,379 proteins were identified by proteomics. Comparison of EBVaBTC and paired normal tissue revealed 547 differentially expressed proteins. Enrichment analysis demonstrated that differentially expressed proteins in the EBVaBTC were associated with EBV infection and T cell activation. We also observed the expression of immune checkpoint other than PD-1, including LAG-3 and TIM-3. Conclusions: Identification of EBVaBTC may represent a subset of patients with promising response to immunotherapy. [Table: see text]
Tislelizumab (TIS) versus sorafenib (SOR) in first-line (1L) treatment of unresectable hepatocellular carcinoma (HCC): The RATIONALE-301 European/North American (EU/NA) subgroup.
Authors: Vogel Arndt , Meyer Tim , Assenat Eric , Calvo Campos Mariona , Li Songzi , Chen Yaxi , Boisserie Frederic , Abdrashitov Ramil , Marino Donatella , Finn Richard S. 
Published: June 2023

4082 Background: HCC is one of the most commonly diagnosed cancers globally. Most cases occur in Asia, although a number of patients (pts) are affected in Europe and North America. In the phase 3, open-label RATIONALE-301 trial (NCT03412773), TIS, a PD-1 inhibitor, showed non-inferior overall survival (OS) versus SOR (hazard ratio 0.85, 95% CI: 0.71, 1.02), and a favorable safety profile, in 1L treatment of pts with unresectable HCC. Here, efficacy and safety of TIS versus SOR in the RATIONALE-301 EU/NA subgroup were compared with the overall population (OP). Methods: Systemic therapy-naïve adults with histologically confirmed HCC were randomized (1:1) to receive TIS (200 mg IV Q3W) or SOR (400 mg orally BID) until disease progression, intolerable toxicity, or withdrawal. The primary endpoint was OS; secondary endpoints included objective response rate (ORR), progression-free survival (PFS), and duration of response (DoR) by blinded independent review committee per RECIST v1.1, and safety. Results: In the EU/NA subgroup (172/674 pts randomized), at data cutoff (July 11, 2022), median (m) OS follow-up was 37.9 months (mo) (TIS) vs 38.5 mo (SOR). At baseline, fewer pts in the EU/NA subgroup had Barcelona Clinic Liver Cancer (BCLC) Stage C disease (70% vs 78%) and extrahepatic spread (51% vs 62%), and more had a non-viral etiology (60% vs 24%) or underlying HCV infection (28% vs 13%) than in the OP, respectively. Distribution of other baseline characteristics was generally similar between the EU/NA subgroup and the OP. Efficacy data in the EU/NA subgroup were consistent with the OP. Numerically longer mOS and mDoR, higher ORR, and similar mPFS were observed with TIS versus SOR in the EU/NA subgroup. In the EU/NA safety population, incidence of ≥grade 3 treatment-emergent adverse events (TEAEs; 46% vs 66%), ≥grade 3 treatment-related TEAEs (TRAEs; 17% vs 50%), and TRAEs leading to discontinuation (9% vs 15%) was lower with TIS versus SOR, respectively, similar to the OP. Conclusions: In the RATIONALE-301 EU/NA subgroup, mOS of TIS was non-inferior versus SOR, consistent with the findings from the OP. Numerically longer mOS and mDoR, and a higher ORR was seen with TIS versus SOR in the EU/NA subgroup, which had a higher rate of pts with non-viral etiology and a slightly lower number of pts with advanced-stage disease (BCLC Stage C) compared with the OP. Clinical trial information: NCT03412773 . [Table: see text]
A novel patient-centric longitudinal data registry platform to generate insights into real-world cholangiocarcinoma (CCA) clinical practice.
Authors: Nottke Amanda , Javle Milind M. , Borad Mitesh J. , Azad Nilofer Saba , Brimble Elise , Martin Richard L , OBrien Conner , Lindsey Stacie , Bachini Melinda , Maithel Shishir K. 
Published: June 2023

4084 Background: Treatment of advanced CCA has changed dramatically over the past five years with the advent of molecularly targeted therapy, now approved in the 2nd line and beyond. However, real world utilization of molecular profiling and targeted therapy is still unknown and these data are critical to empower treatment decision-making. Methods: In 2019, the Cholangiocarcinoma Foundation (CCF) and Ciitizen (a wholly owned subsidiary of Invitae Corporation) collaboratively launched a registry platform that directly consents patients and collects comprehensive medical records. De-identified data including clinical characteristics, molecular testing, interventions, and outcomes are extracted and standardized for research use. The data is longitudinal with regularly planned updates; registry participants can be re-engaged to obtain additional data and communicate tailored insights. Results: We quantified the rate of molecular testing, the presence of targetable biomarkers, and the utilization and outcomes on matched targeted therapies for 372 individuals with CCA. 328 (88.2%) individuals had molecular testing, with the identified targetable mutations and matched therapies reported. Of 328 individuals who had molecular testing, 111 (33.8%) individuals had one or more targetable mutations (116 mutations total). Only 46% (51) of individuals with targetable mutations received targeted therapy. Of the 54% (60) individuals with targetable mutations that did not receive any matched therapy, the majority (61.7%, 37) were in early disease or first line of treatment and therefore not yet eligible for targeted therapy. These individuals will be informed that based on their molecular profile, a targeted therapy may be an option, and suggest they discuss with their treating physician. Conclusions: A novel prospectively-maintained database registry for CCA has been formed in collaboration between a patient advocacy organization (CCF) and industry (Invitae). Prevalence of actionable biomarkers was higher than historically expected and may reflect patient utilization bias of the registry platform. Molecular profiling and access to targeted therapeutics remains suboptimal at this time in CCA. Future directions for the registry include identifying and targeting disparities in care and supporting biopharmaceutical development and regulatory decisions. [Table: see text]
Racial and socioeconomic disparities in time to chemotherapy and survival in patients with pancreatic cancer.
Authors: Shah Shivani , Rock James , Wegner Rodney E. , Monga Dulabh K. 
Published: June 2023

4100 Background: Pancreatic cancer is traditionally known to be an aggressive malignancy, requiring timely diagnosis and treatment, including chemotherapy and/or surgery. Prior studies have evaluated variances in overall survival (OS) based on race or income; however, research regarding time to treatment based on racial and socioeconomic disparities is underwhelmingly studied. Our project sought to evaluate the impact of race and income on time to chemotherapy and OS in pancreatic cancer patients receiving neoadjuvant or adjuvant chemotherapy. Methods: The National Cancer Database (NCDB) from 2004-2020 was reviewed for patients with a diagnosis of pancreatic cancer, including all types and stages. Exclusion criteria included: no documented income level, time to first treatment surgery, or time to chemotherapy. Our patient population was then separated into two cohorts: neoadjuvant and adjuvant. Income level was stratified into the following: < $30,000, $30,000-34,999, $35,000-$45,999, and > $46,000. Race was also noted. We utilized a logistic regression to identify factors associated with longer time to chemotherapy (using median time to chemotherapy as a benchmark for early or later initiation of chemotherapy). A Cox proportional hazards model was used to identify factors associated with worse survival. A p-value < 0.05 was deemed significant. Results: Our final sample size included 64,640 patients. 6,887 (10.6%) of patients had an income less than $30,000. 55,340 (85.6%) of patients were Caucasian, 6,379 (9.9%) patients were African American, and 172 (0.002%) were American Indian. 18,679 (28.9%) received neoadjuvant chemotherapy, and 45,961 (71.1%) received adjuvant chemotherapy. Median time to chemotherapy was 27 [0-2048] days and 71 [0-1895] days in the neoadjuvant and adjuvant cohorts, respectively. Within both cohorts, income > $46,000 was noted to have significantly earlier time to chemotherapy compared to lower income levels. Those privately insured had significantly earlier time to chemotherapy compared to uninsured. The African American population was associated with a later time to first chemotherapy in comparison to Caucasians in both subgroups. A significantly less OS in the African American population was appreciated in the neoadjuvant cohort (HR 0.92, p-value 0.02), but not the adjuvant cohort. Conclusions: Our retrospective analysis emphasizes that minorities and/or those with a poor socioeconomic status have significant delay in time to chemotherapy in the neoadjuvant and adjuvant setting. Within the African American neoadjuvant cohort, a significantly worse OS was highlighted. This study emphasizes racial and socioeconomic disparities in our healthcare system. Limitations of our study include its retrospective nature and no information regarding the type of surgery the patients received, which could further account for differences in time to chemotherapy.
Association of a high E2F targets score with survival in hepatocellular carcinoma patients.
Authors: Chida Kohei , Oshi Masanori , Roy Arya Mariam , Yachi Takafumi , Nara Masaki , Yamada Kyogo , Matsuura Osamu , Hashizume Tadashi , Endo Itaru , Takabe Kazuaki 
Published: June 2023

4106 Background: Hepatocellular carcinoma (HCC) is one of the leading causes of cancer-related mortality. Multiple staging systems have all been proposed to date; however, the optimal tool for stratification of prognosis is still not universally accepted. E2F targets are the essential component of cell proliferation, thus we hypothesized that a score to quantify E2F activity is expected to reflect the aggressiveness and prognosis of HCC. Methods: Total of 655 HCC patients from TCGA (The Cancer Genome Atlas) -HCC ( n=358), GSE6764 ( n=75), GSE76427 ( n = 115), and GSE89377 ( n=107) cohorts were analyzed. The score was generated using MSigDb Hallmark E2F Targets gene set using Gene Set Variation Analysis. Results: The E2F targets scores of TGCA-HCC patients showed a bimodal distribution, thus high vs. low score groups were divided by median. As expected, high E2F targets enriched all of the Hallmark cell proliferation-related gene sets; E2F targets, G2M checkpoint, MYC targets v1 and v2, and Mitotic spindle. It also enriched gene sets known to aggravate cancer, such as Glycolysis, mTORC1 signaling, DNA repair, and Unfolded protein response. E2F targets were significantly associated with histological grade, tumor size, and stage, as well as proliferation score and MKI67 expression. Furthermore, a higher E2F targets score was significantly associated with higher intra-tumoral genomic heterogeneity and homologous recombination deficiency, suggesting greater tumor aggressiveness. In agreement, E2F targets score correlated with the pathological progression from normal liver, cirrhosis, dysplasia, to early and advanced HCC consistently in two cohorts (GSE6764 and GSE89377). Further, the abundance of hepatocytes, fibroblasts, adipocytes, and lymphatic endothelial cells were all significantly less in high E2F HCC, which reflects proliferative cancer. On the other hand, there was no relationship between E2F and mutation rates or neoantigens. High E2F was associated with high infiltration of anti-cancerous immune cells; CD8, CD4 memory, and Th1 cells, however, there was no difference in cytolytic activity, and it did not enrich any of immune response-related gene sets. High E2F HCC was associated with worse disease-free (DFS), disease-specific (DSS), and overall survival (OS), and this was the case in both early (I and II) and late (III and IV) stages. A multivariate analysis revealed that the E2F targets score was an independent prognostic factor for OS (HR=1.68, 95%CI= 1.15–2.46, p = 0.007) as well as DSS (HR=1.81, 95%CI=1.27–2.59, p = 0.001) in patients with HCC. Conclusions: We found that the E2F targets score not only indicates cell proliferation, but also is associated with cancer aggressiveness and worse survival. Our findings suggest a possible future use of the E2F targets score as a prognostic biomarker in patients with HCC.
Evaluating racial disparities for patients with advanced hepatocellular carcinoma (HCC) receiving first line immunotherapy within an equal access system.
Authors: Boyle Lauren Diaz , Alkadimi Munaf , Fierro Maria Elena , Lucero Kana , Franklin Kathleen , Mader Michael , Nooruddin Zohra 
Published: June 2023

4109 Background: The incidence and mortality of HCC are increasing in the USA. HCC disparities have been reported across the entirety of the cancer timeline, from screening to local and systemic treatment and liver transplant. We aim to analyze the clinical characteristics, outcomes, and racial disparities in patients with advanced HCC receiving first-line Atezolizumab plus Bevacizumab (A+B) in the Veterans Health Administration (VHA) – the only health care system in the USA that provides equal access to all patients. Methods: Patients were followed from their A+B initiation date through the earliest of the last VHA visit, loss to follow-up, death, or end of study on Jan 31, 2023. Structured electronic health record and chart review data were retrospectively collected to determine patient baseline characteristics, including self-reported race, number of A+B doses, treatment response, subsequent line of treatment, length of follow-up, and overall survival (OS). The Chi-Squared test was used to compare rates, and Mann-Whitney test was used to compare medians. Results: Three hundred twenty-five patients were included. 64% were non-Hispanic White (NHW), and 36% were all other (AO) ethnicities or races combined (26% Black, 8% Hispanic, 2% Asian or Indigenous). The median age for each cohort was similar (66 years for AO vs. 68 for NHW), and ECOG performance was <1 in nearly 90% of each cohort. Viral hepatitis accounted for 70% and 48% of AO and NHW, respectively (p=0.0001). Despite clinical differences in OS and progression free survival (PFS), they were not statistically significant. Conclusions: Our VHA real-world data shows that despite having statistically significant etiologies, there was no statistically significant difference in the PFS and OS of patients with advanced HCC receiving first-line A+B in an equal access care system. This study supports our group’s findings in other malignant cohorts within VHA where equal healthcare access can mitigate other socio-demographic and biological factors. [Table: see text]
The clinical feasibility of circulating tumor DNA alterations in patients with advanced hepatocellular carcinoma.
Authors: Kim Gwangil , Hwang Sohyun , Kang Haeyoun , Cheon Jaekyung , Kang Beodeul , Kim Chan , Chon Hong Jae 
Published: June 2023

4110 Background: Need for individualized treatment based on tumor attributes is being reinforced with the rapid development of targeted therapies and immune checkpoint inhibitors for hepatocellular carcinoma (HCC). Lack of mandatory tissue biopsy for the diagnosis of HCC, continues to be a challenge for development of precision medicine for HCC compared to other solid tumors. Liquid biopsy enables comprehensive genomic profiling of circulating tumor DNA (ctDNA) shed from tumors into the circulation. This could compensate for the lack of tissue-based analysis in HCC providing a non-invasive and safer option for genomic profiling. This study aims to address the concordance between commercially available ctDNA and tissue genomic profiling in patients with advanced HCC and to assess the feasibility of liquid biopsy in the treatment of patients with HCC. Methods: Patients subjected to tissue-based next-generation sequencing (NGS) before systemic therapy for advanced HCC at CHA Bundang Medical Center from June 2020 to October 2022 and also had sufficient plasma samples available for ctDNA analysis were included. Oncomine Comprehensive Assay (OCA) ThermoFisher was used for tissue-based NGS and Guardant360 for ctDNA based NGS. For the concordance assessment for the same patient, paired samples of ctDNA and tumor tissue, we investigated the common targeted regions across both the panels. Results: Out of hundred thirty patients included in this study, 98% percent of ctDNA samples for these patients were successfully sequenced; ctDNA were detected in 88% of the samples. For the assessment of concordance between intra-patient ctDNA and tumor tissues, we investigated only clinically important (AMP/ASCO/CAP guidelines tier 1 or 2) variants. When we considered the variants detected in tissues as true positive, the concordance between the mutations detected from ctDNA and tissue samples indicated 68.9% sensitivity and 63.1% positive predictive value (PPV). In ctDNA, targetable alterations were detected in 16.9% of samples, such as ARID1A mutations (7.7%), PTEN mutations (6.9%), PIK3CA hotspot mutations (1.5%), RAS mutations (1.5%), and one RET fusion (0.8%). Regarding the concordance between ctDNA and tumor tissue, the sensitivity for mutation was high for RAS mutation (100.0%), PTEN mutations (100.0%), and ARID1A mutations (75.0%) but low for PIK3CA hotspot mutations (0.0%). One RET fusion was identified only in ctDNA. Conclusions: ctDNA-based genotyping demonstrated clinically acceptable concordance with tissue genomic profiling in patients with advanced HCC. Thus, liquid biopsy using ctDNA help address any challenges associated with the limited use of tissue-based genomic profiling in HCC. Investigation of time between blood and tissue collection and the impact it has on concordance is ongoing.