bluuebunny/crossref_metadata_2025_split huggingface dataset:
Bidirectional two-sample Mendelian randomization analysis reveals a causal effect of interleukin-18 levels on postherpetic neuralgia risk
Authors: Liang Xiao , Fan Yuchao 
Published: May 2023

BackgroundPostherpetic neuralgia (PHN) is a debilitating complication of herpes zoster, characterized by persistent neuropathic pain that significantly impairs patients’ quality of life. Identifying factors that determine PHN susceptibility is crucial for its management. Interleukin-18 (IL-18), a pro-inflammatory cytokine implicated in chronic pain, may play a critical role in PHN development.MethodsIn this study, we conducted bidirectional two-sample Mendelian randomization (MR) analyses to assess genetic relationships and potential causal associations between IL-18 protein levels increasing and PHN risk, utilizing genome-wide association study (GWAS) datasets on these traits. Two IL-18 datasets obtained from the EMBL’s European Bioinformatics Institute database which contained 21,758 individuals with 13,102,515 SNPs and Complete GWAS summary data on IL-18 protein levels which contained 3,394 individuals with 5,270,646 SNPs. The PHN dataset obtained from FinnGen biobank had 195,191 individuals with 16,380,406 SNPs.ResultsOur findings from two different datasets of IL-18 protein levels suggest a correlation between genetically predicted elevations in IL-18 protein levels and an increased susceptibility to PHN.(IVW, OR and 95% CI: 2.26, 1.07 to 4.78; p = 0.03 and 2.15, 1.10 to 4.19; p =0.03, respectively), potentially indicating a causal effect of IL-18 protein levels increasing on PHN risk. However, we did not detect any causal effect of genetic liability to PHN risk on IL-18 protein levels.ConclusionThese findings suggest new insights into identifying IL-18 protein levels increasing at risk of developing PHN and may aid in the development of novel prevention and treatment approaches for PHN.
Assignment of tracks from tagged Atlantic bluefin tuna Thunnus thynnus to potential stocks using behavioural differences and habitat partitioning
Authors: Dedman Simon , Aalto Emilius A. , Stokesbury Michael J. W. , Schallert Robert J. , Castleton Michael R. , Block Barbara A. 
Published: May 2023

IntroductionAtlantic bluefin tuna (ABT) are large, migratory pelagic predators of high economic importance. ABT are currently managed as two independent stocks assigned to discrete spawning areas (Gulf of Mexico, and Mediterranean); however, stock overlap outside spawning areas makes accurate assignment of catch to stock-of-origin difficult.MethodsWithin this two-stock paradigm, we characterised stock-specific spatial distributions and behaviours by comparing habitat usage and vertical movement behaviours of 118 electronically tagged adult ABT spatially assigned to the GOM and Med spawning grounds. These spatial and behavioural differences were used in tests to probabilistically assign unknown individuals (which did not visit the GOM/Med spawning areas) to a stock.ResultsThis new methodological approach using existing tag data, enables increased assignment of a track to a potential stock, to be achieved before genetic assignments. We identified certain markedly different movement patterns, range extents, depth use preferences (and associated area usage), migration directness and speeds, corresponding distance from shore, and mesopelagic-layer visitation. The probabilistic assignment approach had 97% in-bag testing accuracy, then assigned 190 individuals to a stock, doubling the number of assigned stock-of-origin tracks in our dataset, and potentially revealing novel movement and behaviour patterns among pre-spawning-age ABT.DiscussionThis approach can be easily adapted to other study species, more stocks, and different testing variables, hopefully serving as a useful addition to the fisheries management toolkit.
High-accuracy detection of supraspinatus fatty infiltration in shoulder MRI using convolutional neural network algorithms
Authors: Saavedra Juan Pablo , Droppelmann Guillermo , García Nicolás , Jorquera Carlos , Feijoo Felipe 
Published: May 2023

BackgroundThe supraspinatus muscle fatty infiltration (SMFI) is a crucial MRI shoulder finding to determine the patient’s prognosis. Clinicians have used the Goutallier classification to diagnose it. Deep learning algorithms have been demonstrated to have higher accuracy than traditional methods.AimTo train convolutional neural network models to categorize the SMFI as a binary diagnosis based on Goutallier’s classification using shoulder MRIs.MethodsA retrospective study was performed. MRI and medical records from patients with SMFI diagnosis from January 1st, 2019, to September 20th, 2020, were selected. 900 T2-weighted, Y-view shoulder MRIs were evaluated. The supraspinatus fossa was automatically cropped using segmentation masks. A balancing technique was implemented. Five binary classification classes were developed into two as follows, A: 0, 1 v/s 3, 4; B: 0, 1 v/s 2, 3, 4; C: 0, 1 v/s 2; D: 0, 1, 2, v/s 3, 4; E: 2 v/s 3, 4. The VGG-19, ResNet-50, and Inception-v3 architectures were trained as backbone classifiers. An average of three 10-fold cross-validation processes were developed to evaluate model performance. AU-ROC, sensitivity, and specificity with 95% confidence intervals were used.ResultsOverall, 606 shoulders MRIs were analyzed. The Goutallier distribution was presented as follows: 0 = 403; 1 = 114; 2 = 51; 3 = 24; 4 = 14. Case A, VGG-19 model demonstrated an AU-ROC of 0.991 ± 0.003 (accuracy, 0.973 ± 0.006; sensitivity, 0.947 ± 0.039; specificity, 0.975 ± 0.006). B, VGG-19, 0.961 ± 0.013 (0.925 ± 0.010; 0.847 ± 0.041; 0.939 ± 0.011). C, VGG-19, 0.935 ± 0.022 (0.900 ± 0.015; 0.750 ± 0.078; 0.914 ± 0.014). D, VGG-19, 0.977 ± 0.007 (0.942 ± 0.012; 0.925 ± 0.056; 0.942 ± 0.013). E, VGG-19, 0.861 ± 0.050 (0.779 ± 0.054; 0.706 ± 0.088; 0.831 ± 0.061).ConclusionConvolutional neural network models demonstrated high accuracy in MRIs SMFI diagnosis.
3% diquafosol sodium eye drops in Chinese patients with dry eye: a phase IV study
Authors: Wang Wenying , Sun Xiaonan , Zhao Jiangyue , Hao Jilong , Zhao Shaozhen , Yan Xiaoming , Shen Ye , Jin Xiuming , Cheng Yan , Wang Linnong , Xu Jianjiang , Zhao Peiquan , Liu Hai , Zeng Siming , Wang Xu , Dong Weili , Xue Jinsong , Chen Wei , Guo Ping , Li Li , Zhang Lijun , Liu Dachuan , Chen Baihua , Lin Zhouqiao , Fu Yanjiang , Liang Lingyi , Dong Yanling , Yang Weizhong , Deng Yingping , Li Guigang , Pan Zhiqiang 
Published: May 2023

IntroductionThe efficacy and safety of 3% diquafosol sodium eye drops in Chinese patients with dry eye in the real-world setting remains unclear.Methods3099 patients with dry eye symptoms were screened according to Asia Dry Eye Society latest recommendation. Among them, 3000 patients were enrolled for a phase IV study. We followed up with multiple clinical characteristics including corneal fluorescein staining, tear break up time, Schirmer’s tests, visual acuity, intraocular pressure, and others. The follow ups were performed at baseline, 2 weeks and 4 weeks after treatment.ResultsBased on the results of corneal fluorescein staining and tear break up time, all age and gender subgroups exhibited obvious alleviation of the symptoms among the patients with dry eye, and the data in elderly group showed the most significant alleviation. All the adverse drug reactions (ADRs, 6.17%) were recorded, among which 6% local ocular ADRs were included. Meanwhile, mild ADRs (91.8%) accounted for the most. Most of the ADRs (89.75%) got a quick and full recovery, with an average time at 15.6 days. 1.37% of patients dropped out of the study due to ADRs.DiscussionThe use of 3% diquafosol sodium eye drop is effective and safe in the treatment of dry eye, with a low incidence of ADRs showing mild symptoms. This trial was registered at Chinese Clinical Trial Registry ID: ChiCTR1900021999 (Registration Date: 19/03/2019).
Empyema caused by Fusobacterium nucleatum with squamous cell carcinoma of the lung: a case report and literature review
Authors: Sun Yue , Dong Han , Zhang Na , Zhao Peng , Qi Yuan , Yang Xin , Wang Lingling 
Published: May 2023

BackgroundFusobacterium nucleatum is a common oral symbiotic flora that can cause respiratory tract, oral nervous system, obstetric and skin infections. Fusobacterium nucleatum infections are mostly caused by aspiration. The clinical manifestations of pulmonary infections with Fusobacterium nucleatum can include simple pneumonia, lung abscesses, empyema, etc.Case presentationWe described the case of a 49-year-old man with a 1-year history of intermittent cough and sputum production who had worsened over the last 4 days with fever and right chest pain. After thoracentesis and catheter drainage were performed, Fusobacterium nucleatum was detected in the pleural effusion by using next-generation sequencing. Meanwhile, a diagnosis of squamous cell carcinoma of the right lung was made by fiberoptic bronchoscopy. The patient's condition improved significantly after percutaneous drainage and long-term intravenous antibiotic treatment.ConclusionsThis is the first case reported of empyema due to Fusobacterium nucleatum infection in a patient with squamous cell carcinoma.
Case report: A rare case of acute hemolysis in advanced rectal cancer after XELOX and nivolumab treatment: analysis of drug-dependent antibodies
Authors: Zhao Dengke , Song Qiao , Wu Chunyan , Wang Shuye 
Published: May 2023

ObjectiveTo investigate the mechanism, in vitro differential test and clinical significance of hemolytic anemia after receiving oxaliplatin and nivolumab treatment.MethodsWe encountered a male patient with stage IV rectal cancer who experienced acute hemolysis during the ninth cycle of treatment with XELOX combined with nivolumab and cetuximab. The patient's blood samples were collected and tested for the presence of oxaliplatin or nivolumab antibodies on red blood cells.ResultsDirect antiglobulin testing of red blood cells incubated with oxaliplatin was strongly positive, whereas cells incubated with nivolumab were negative, which suggested that oxaliplatin was responsible for the hemolysis. After short-term highdose glucocorticoid treatment, human normal immunoglobulin infusion, and other symptomatic treatments, the patient's condition rapidly improved, and he continued to receive nivolumab treatment without further hemolysis.ConclusionAttention should be paid to the possibility of acute hemolysis when using oxaliplatin and nivolumab, and it is important to recognize and manage this adverse event early. We detected oxaliplatin-related antibodies on the surface of red blood cells in vitro, which provided evidence for the following treatments.
Microbial landscapes of the rhizosphere soils and roots of Luffa cylindrica plant associated with Meloidogyne incognita
Authors: Qu Ling , Dai Kang , Wang Jie , Cao Li , Rao Zhongchen , Han Richou 
Published: May 2023

IntroductionThe root-knot nematodes (RKN), especially Meloidogyne spp., are globally emerging harmful animals for many agricultural crops.MethodsTo explore microbial agents for biological control of these nematodes, the microbial communities of the rhizosphere soils and roots of sponge gourd (Luffa cylindrica) infected and non-infected by M. incognita nematodes, were investigated using culture-dependent and -independent methods.ResultsThirty-two culturable bacterial and eight fungal species, along with 10,561 bacterial and 2,427 fungal operational taxonomic units (OTUs), were identified. Nine culturable bacterial species, 955 bacterial and 701 fungal OTUs were shared in both four groups. More culturable bacterial and fungal isolates were detected from the uninfected soils and roots than from the infected soils and roots (except no fungi detected from the uninfected roots), and among all samples, nine bacterial species (Arthrobacter sp., Bacillus sp., Burkholderia ambifaria, Enterobacteriaceae sp., Fictibacillus barbaricus, Microbacterium sp., Micrococcaceae sp., Rhizobiaceae sp., and Serratia sp.) were shared, with Arthrobacter sp. and Bacillus sp. being dominant. Pseudomonas nitroreducens was exclusively present in the infested soils, while Mammaliicoccus sciuri, Microbacterium azadirachtae, and Priestia sp., together with Mucor irregularis, Penicillium sp., P. commune, and Sordariomycetes sp. were found only in the uninfected soils. Cupriavidus metallidurans, Gordonia sp., Streptomyces viridobrunneus, and Terribacillus sp. were only in the uninfected roots while Aspergillus sp. only in infected roots. After M. incognita infestation, 319 bacterial OTUs (such as Chryseobacterium) and 171 fungal OTUs (such as Spizellomyces) were increased in rhizosphere soils, while 181 bacterial OTUs (such as Pasteuria) and 166 fungal OTUs (such as Exophiala) rose their abundance in plant roots. Meanwhile, much more decreased bacterial or fungal OTUs were identified from rhizosphere soils rather than from plant roots, exhibiting the protective effects of host plant on endophytes. Among the detected bacterial isolates, Streptomyces sp. TR27 was discovered to exhibit nematocidal activity, and B. amyloliquefaciens, Bacillus sp. P35, and M. azadirachtae to show repellent potentials for the second stage M. incognita juveniles, which can be used to develop RKN bio-control agents.DiscussionThese findings provided insights into the interactions among root-knot nematodes, host plants, and microorganisms, which will inspire explorations of novel nematicides.
Metabolomics analysis in rat hearts with ischemia/reperfusion injury after diazoxide postconditioning
Authors: Xiang Cen , Yu Shoujia , Ren Qiyang , Jiang Boyi , Li Jing , Zhang Donghang , Wei Yiyong 
Published: May 2023

Background: Diazoxide is a selective mitochondrial-sensitive potassium channel opening agent that has a definite effect on reducing myocardial ischemia/reperfusion injury (MIRI). However, the exact effects of diazoxide postconditioning on the myocardial metabolome remain unclear, which might contribute to the cardioprotective effects of diazoxide postconditioning.Methods: Rat hearts subjected to Langendorff perfusion were randomly assigned to the normal (Nor) group, ischemia/reperfusion (I/R) group, diazoxide (DZ) group and 5-hydroxydecanoic acid + diazoxide (5-HD + DZ) group. The heart rate (HR), left ventricular developed pressure (LVDP), left ventricular end-diastolic pressure (LVEDP), and maximum left ventricular pressure (+dp/dtmax) were recorded. The mitochondrial Flameng scores were analysed according to the ultrastructure of the ventricular myocardial tissue in the electron microscopy images. Rat hearts of each group were used to investigate the possible metabolic changes relevant to MIRI and diazoxide postconditioning.Results: The cardiac function indices in the Nor group were better than those in the other groups at the end point of reperfusion, and the HR, LVDP and +dp/dtmax of the Nor group at T2 were significantly higher than those of the other groups. Diazoxide postconditioning significantly improved cardiac function after ischaemic injury, and the HR, LVDP and +dp/dtmax of the DZ group at T2 were significantly higher than those of the I/R group, which could be abolished by 5-HD. The HR, LVDP and +dp/dtmax of the 5-HD + DZ group at T2 were significantly lower than those of the DZ group. The myocardial tissue in the Nor group was mostly intact, while it exhibited considerable damage in the I/R group. The ultrastructural integrity of the myocardium in the DZ group was higher than that in the I/R and 5-HD + DZ groups. The mitochondrial Flameng score in the Nor group was lower than that in the I/R, DZ and 5-HD + DZ groups. The mitochondrial Flameng score in the DZ group was lower than that in the I/R and 5-HD + DZ groups. Five metabolites, namely, L-glutamic acid, L-threonine, citric acid, succinate, and nicotinic acid, were suggested to be associated with the protective effects of diazoxide postconditioning on MIRI.Conclusion: Diazoxide postconditioning may improve MIRI via certain metabolic changes. This study provides resource data for future studies on metabolism relevant to diazoxide postconditioning and MIRI.
Bevacizumab is associated with cerebral microstructural alterations: a DTI study in high-grade glioma
Authors: Kassubek Rebecca , Lulé Dorothée , Ludolph Albert C. , Kassubek Jan , Müller Hans-Peter 
Published: May 2023

BackgroundFor recurrent high-grade glioma, especially glioblastoma, no standard of care treatment exists. Due to the prolongation of progression-free survival and a cortiocosteroid-sparing effect, bevacizumab is often used in this condition. Despite initial clinical responses, there is growing evidence that bevacizumab may potentiate microstructural alterations which may cause cognitive decline, mostly affecting learning and memory.MethodsTo investigate bevacizumab-associated microstructural damage of defined regions of interest (ROIs) in the white matter, diffusion tensor imaging (DTI) was performed in 10 patients with a case history or third-party report for neurological dysfunction concerning cognitive performance. Serial DTI data before and under bevacizumab were collected and longitudinal changes of fractional anisotropy (FA), axial diffusivity (AD), and radial diffusivity (RD) were assessed in mesiotemporal (hippocampal), frontal, and occipital regions.ResultsThe longitudinal DTI data under bevacizumab compared to DTI prior to bevacizumab demonstrated a significant decrease in FA and increase in AD and RD both in mesiotemporal (hippocampal) regions and in frontal regions, whereas occipital regions showed no significant alterations in DTI metrics.ConclusionThe regionally impaired microstructure in mesiotemporal (hippocampal) regions and in frontal regions is in line with the fact that neurocognitive impairment in learning and memory is mostly related to hippocampal integrity and attentional control in frontal regions. Further studies could investigate the potential of DTI to assess bevacizumab-associated microstructural damages in vulnerable brain regions.
Research hotspots and trends on spinal cord stimulation for pain treatment: a two-decade bibliometric analysis
Authors: Yang Sheng , Zhong Sen , Fan Yunshan , Zhu Yanjie , Xu Ningze , Liao Yue , Fan Guoxin , Liao Xiang , He Shisheng 
Published: May 2023

BackgroundChronic pain poses a significant social burden. Spinal cord stimulation (SCS) is considered to be the most promising treatment for refractory pain. The aim of this study was to summarize the current research hotspots on SCS for pain treatment during the past two decades and to predict the future research trends by bibliometric analysis.MethodsThe literature over the last two decades (2002–2022) which was related to SCS in pain treatment was obtained from the Web of Science Core Collection. Bibliometric analyses were conducted based on the following aspects: (1) Annual publication and citation trends; (2) Annual publication changes of different publication types; (3) Publications and citations/co-citations of different country/institution/journal/author; (4) Citations/co-citation and citation burst analysis of different literature; and (5) Co-occurrence, cluster, thematic map, trend topics, and citation burst analysis of different keywords. (6) Comparison between the United States and Europe. All analyses were performed on CiteSpace, VOSviewer, and R bibliometrix package.ResultsA total of 1,392 articles were included in this study, with an increasing number of publications and citations year by year. The most highly published type of literature was clinical trial. United States was the country with the most publications and citations; Johns Hopkins University was the institution with the most publications; NEUROMODULATION published the most papers; the most published author was Linderoth B; and the most cited paper was published in the PAIN by Kumar K in 2007. The most frequently occurring keywords were “spinal cord stimulation,” “neuropathic pain,” and “chronic pain,” etc.ConclusionThe positive effect of SCS on pain treatment has continued to arouse the enthusiasm of researchers in this field. Future research should focus on the development of new technologies, innovative applications, and clinical trials for SCS. This study might facilitate researchers to comprehensively understand the overall perspective, research hotspots, and future development trends in this field, as well as seek collaboration with other researchers.
Two sides of the same coin: distinct neuroanatomical patterns predict crystallized and fluid intelligence in adults
Authors: Xu Hui , Xu Cheng , Yang Zhenliang , Bai Guanghui , Yin Bo 
Published: May 2023

BackgroundCrystallized intelligence (Gc) and fluid intelligence (Gf) are regarded as distinct intelligence components that statistically correlate with each other. However, the distinct neuroanatomical signatures of Gc and Gf in adults remain contentious.MethodsMachine learning cross-validated elastic net regression models were performed on the Human Connectome Project Young Adult dataset (N = 1089) to characterize the neuroanatomical patterns of structural magnetic resonance imaging variables that are associated with Gc and Gf. The observed relationships were further examined by linear mixed-effects models. Finally, intraclass correlations were computed to examine the similarity of the neuroanatomical correlates between Gc and Gf.ResultsThe results revealed distinct multi-region neuroanatomical patterns predicted Gc and Gf, respectively, which were robust in a held-out test set (R2 = 2.40, 1.97%, respectively). The relationship of these regions with Gc and Gf was further supported by the univariate linear mixed effects models. Besides that, Gc and Gf displayed poor neuroanatomical similarity.ConclusionThese findings provided evidence that distinct machine learning-derived neuroanatomical patterns could predict Gc and Gf in healthy adults, highlighting differential neuroanatomical signatures of different aspects of intelligence.
Characterization of starch extracted from seeds of Cycas revoluta
Authors: Li Kehu , Zhang Tongze , Zhao Wei , Ren Huanhuan , Hong Siqi , Ge Yongyi , Corke Harold 
Published: May 2023

IntroductionStarch is major component in the big seeds of Cycas revoluta, however the characteristics of Cycas revoluta remain unknown.MethodsIn this study, the physicochemical and structural properties of two starch samples extracted from Cycad revoluta seeds were systematically investigated, using various techniques.ResultsThe amylose contents of the two samples were 34.3 % and 35.5%, respectively. The spherical-truncated shaped starch granules possessed A-type crystallinity, and had an average diameter less than 15 μm. Compared to most commonly consumed cereal and potato starch, Cycad revoluta starch showed distinctive characteristics. For physicochemical properties, in the process of gelatinization, the Cycad revoluta starch showed similar viscosity profile to starches of some potato varieties, but Cycad revoluta starch had higher gelatinization temperature. Upon cooling, Cycad revoluta starch formed harder gels than rice starch. For structure, the molecular weight (indexed by Mw, Mn and Rz values), branching degree and the branch chain length distribution were determined.DiscussionThe results suggested that Cycad revoluta starch were different in structure from the main-stream starches. Notable differences in some starch traits between the two samples were recorded, which could be attributed to environmental factors. In general, this study provides useful information on the utilization of Cycad revoluta starch in both food and non-food industries.