bluuebunny/crossref_metadata_2025_split huggingface dataset:
Tailoring mSiO2-SmCox nanoplatforms for magnetic/photothermal effect-induced hyperthermia therapy
Authors: Liang Xinqiang , Xu Wenting , Li Siyi , Kurboniyon Mekhrdod S. , Huang Kunying , Xu Guilan , Wei Wene , Ning Shufang , Zhang Litu , Wang Chen 
Published: July 2023

Hyperthermia therapy is a hotspot because of its minimally invasive treatment process and strong targeting effect. Herein, a synergistic magnetic and photothermal therapeutic nanoplatform is rationally constructed. The well-dispersive mSiO2-SmCox nanoparticles (NPs) were synthesized through a one-step procedure with the regulated theoretical molar ratio of Sm/Co among 1:1, 1:2, and 1:4 for controlling the dispersion and magnetism properties of SmCox NPs in situ growth in the pore structure of mesoporous SiO2 (mSiO2), where mSiO2 with diverse porous structures and high specific surface areas serving for locating the permanent magnetic SmCox NPs. The mSiO2-SmCox (Sm/Co = 1:2) NPs with highly dispersed and uniform morphology has an average diameter of ∼73.08 nm. The photothermal conversion efficiency of mSiO2-SmCox (Sm/Co = 1:2) NPs was determined to be nearly 41%. The further in vitro and in vivo anti-tumor evaluation of mSiO2-SmCox (Sm/Co = 1:2) NPs present promising potentials for hyperthermia-induced tumor therapy due to magnetic and photothermal effects.
Investigating students’ development of mechanistic reasoning in modeling complex aquatic ecosystems
Authors: Ryan Zach , Danish Joshua , Zhou Jinzhi , Stiso Christina , Murphy Danielle , Duncan Ravit , Chinn Clark , Hmelo-Silver Cindy E. 
Published: July 2023

IntroductionThis study reports on a classroom intervention where upper-elementary students and their teacher explored the biological phenomena of eutrophication using the Modeling and Evidence Mapping (MEME) software environment and associated learning activities. The MEME software and activities were designed to help students create and refine visual models of an ecosystem based on evidence about the eutrophication phenomena. The current study examines how students utilizing this tool were supported in developing their mechanistic reasoning when modeling complex systems. We ask the following research question: How do designed activities within a model-based software tool support the integrations of complex systems thinking and the practice of scientific modeling for elementary students?MethodsThis was a design-based research (DBR) observational study of one classroom. A new mechanistic reasoning coding scheme is used to show how students represented their ideas about mechanisms within their collaboratively developed models. Interaction analysis was then used to examine how students developed their models of mechanism in interaction.ResultsOur results revealed that students’ mechanistic reasoning clearly developed across the modeling unit they participated in. Qualitative coding of students’ models across time showed that students’ mechanisms developed from initially simplistic descriptions of cause and effect aspects of a system to intricate connections of how multiple entities within a system chain together in specific processes to effect the entire system. Our interaction analysis revealed that when creating mechanisms within scientific models students’ mechanistic reasoning was mediated by their interpretation/grasp of evidence, their collaborative negotiations on how to link evidence to justify their models, and students’ playful and creative modeling practices that emerged in interaction.DiscussionIn this study, we closely examined students’ mechanistic reasoning that emerge in their scientific modeling practices, we offer insights into how these two theoretical frameworks can be effectively integrated in the design of learning activities and software tools to better support young students’ scientific inquiry. Our analysis demonstrates a range of ways that students represent their ideas about mechanism when creating a scientific model, as well as how these unfold in interaction. The rich interactional context in this study revealed students’ mechanistic reasoning around modeling and complex systems that may have otherwise gone unnoticed, suggesting a need to further attend to interaction as a unit of analysis when researching the integration of multiple conceptual frameworks in science education.
Impact of bias correction on climate change signals over central Europe and the Iberian Peninsula
Authors: Ugolotti Alessandro , Anders Tim , Lanssens Benjamin , Hickler Thomas , François Louis , Tölle Merja H. 
Published: July 2023

Vegetation models for climate adaptation and mitigation strategies require spatially high-resolution climate input data in which the error with respect to observations has been previously corrected. To quantify the impact of bias correction, we examine the effects of quantile-mapping bias correction on the climate change signal (CCS) of climate, extremes, and biological variables from the convective regional climate model COSMO-CLM and two dynamic vegetation models (LPJ-GUESS and CARAIB). COSMO-CLM was driven and analyzed at 3 km horizontal resolution over Central Europe (CE) and the Iberian Peninsula (IP) for the transient period 1980–2070 under the RCP8.5 scenario. Bias-corrected and uncorrected climate simulations served as input to run the dynamic vegetation models over Wallonia. Main result of the impact of bias correction on the climate is a reduction of seasonal absolute precipitation by up to −55% with respect to uncorrected simulations. Yet, seasonal climate changes of precipitation and also temperature are marginally affected by bias correction. Main result of the impact of bias correction on changes in extremes is a robust spatial mean CCS of climate extreme indices over both domains. Yet, local biases can both over- and underestimate changes in these indices and be as large as the raw CCS. Changes in extremely wet days are locally enhanced by bias correction by more than 100%. Droughts in southern IP are exacerbated by bias correction, which increases changes in consecutive dry days by up to 14 days/year. Changes in growing season length in CE are affected by quantile mapping due to local biases ranging from 24 days/year in western CE to −24 days/year in eastern CE. The increase of tropical nights and summer days in both domains is largely affected by bias correction at the grid scale because of local biases ranging within ±14 days/year. Bias correction of this study strongly reduces the precipitation amount which has a strong impact on the results of the vegetation models with a reduced vegetation biomass and increases in net primary productivity. Nevertheless, there are large differences in the results of the two applied vegetation models.
Do temperature and population size structure influence the quantity of fish eDNA in water?
Authors: Hervé Alix , Domaizon Isabelle , Baudoin Jean-Marc , Dejean Tony , Gibert Pierre , Valentini Alice , Logez Maxime 
Published: July 2023

Various factors can influence the concentration of eDNA found in the environment and blur the link between eDNA results and in situ fish abundances, biomasses or even occurrences. We studied the influence of one abiotic factor, the temperature, and one biotic factor, the fish size class, on the amount of fish eDNA detectable in water. To do so, we conducted two controlled experiments using tench (Tinca tinca, L) placed into outdoor mesocosms during 1 week. The quantification of fish eDNA abundances was performed using quantitative PCR after filtrating a large volume of water (30 L). The Bayesian hierarchical ANOVAs performed on qPCR results did not detect the effect of size class on eDNA amount, but fish eDNA concentration was shown to increase significantly when temperature rose by 6°C (no effect detected at 3°C). This suggests that fish assemblage quantification of two thermally contrasting sites through eDNA is not directly comparable.
Comparative transcriptomic analysis provides key genetic resources in clove basil (Ocimum gratissimum) under cadmium stress
Authors: Wang Bin , Wang Yukun , Yuan Xiao , Jiang Yuanyuan , Zhu Yunna , Kang Xinmiao , He Jinming , Xiao Yanhui 
Published: July 2023

Planting aromatic plant might be a promising strategy for safely utilizing heavy metal (HM)-contaminated soils, as HMs in essential oil could be completely excluded using some special technologies with ease. Clove basil (Ocimum gratissimum L.) is an important aromatic plant used in essential oil production. Improving cadmium (Cd) tolerance in clove basil can increase its production and improve the utilization efficiency of Cd-contaminated soils. However, the lack of genomic information on clove basil greatly restricts molecular studies and applications in phytoremediation. In this study, we demonstrated that high levels of Cd treatments (0.8, 1.6 and 6.5 mg/L) significantly impacted the growth and physiological attributes of clove basil. Cd contents in clove basil tissues increased with treatment concentrations. To identify Cd stress-responsive genes, we conducted a comparative transcriptomic analysis using seedlings cultured in the Hoagland’s solution without Cd ion (control) or containing 1.6 mg/L CdCl2 (a moderate concentration of Cd stress for clove basil seedlings). A total of 104.38 Gb clean data with high-quality were generated in clove basil under Cd stress through Illumina sequencing. More than 1,800 differential expressed genes (DEGs) were identified after Cd treatment. The reliability and reproducibility of the transcriptomic data were validated through qRT-PCR analysis and Sanger sequencing. KEGG classification analysis identified the “MAPK signaling pathway,” “plant hormone signal transduction” and “plant-pathogen interaction” as the top three pathways. DEGs were divided into five clusters based on their expression patterns during Cd stress. The functional annotation of DEGs indicated that downregulated DEGs were mainly involved in the “photosynthesis system,” whereas upregulated DEGs were significantly assigned to the “MAPK signaling pathway” and “plant-pathogen interaction pathway.” Furthermore, we identified a total of 78 transcription factors (TFs), including members of bHLH, WRKY, AP2/ERF, and MYB family. The expression of six bHLH genes, one WRKY and one ERF genes were significantly induced by Cd stress, suggesting that these TFs might play essential roles in regulating Cd stress responses. Overall, our study provides key genetic resources and new insights into Cd adaption mechanisms in clove basil.
A chimeric protein-based vaccine elicits a strong IgG antibody response and confers partial protection against Shiga toxin-producing Escherichia coli in mice
Authors: Montero David A. , Garcia-Betancourt Richard , Vidal Roberto M. , Velasco Juliana , Palacios Pablo A. , Schneider Daniela , Vega Carolina , Gómez Leonardo , Montecinos Hernán , Soto-Shara Rodrigo , Oñate Ángel , Carreño Leandro J. 
Published: July 2023

BackgroundShiga toxin-producing Escherichia coli (STEC) is a foodborne pathogen that causes gastrointestinal infections, ranging from acute diarrhea and dysentery to life-threatening diseases such as Hemolytic Uremic Syndrome. Currently, a vaccine to prevent STEC infection is an unmet medical need.ResultsWe developed a chimeric protein-based vaccine targeting seven virulence factors of STEC, including the Stx2B subunit, Tir, Intimin, EspA, Cah, OmpT, and AggA proteins. Immunization of mice with this vaccine candidate elicited significant humoral and cellular immune responses against STEC. High levels of specific IgG antibodies were found in the serum and feces of immunized mice. However, specific IgA antibodies were not detected in either serum or feces. Furthermore, a significantly higher percentage of antigen-specific CD4+ T cells producing IFN-γ, IL-4, and IL-17 was observed in the spleens of immunized mice. Notably, the immunized mice showed decreased shedding of STEC O157:H7 and STEC O91:H21 strains and were protected against weight loss during experimental infection. Additionally, infection with the STEC O91:H21 strain resulted in kidney damage in control unimmunized mice; however, the extent of damage was slightly lower in immunized mice. Our findings suggest that IgG antibodies induced by this vaccine candidate may have a role in inhibiting bacterial adhesion and complement-mediated killing.ConclusionThis study provides evidence that IgG responses are involved in the host defense against STEC. However, our results do not rule out that other classes of antibodies also participate in the protection against this pathogen. Additional work is needed to improve the protection conferred by our vaccine candidate and to elucidate the relevant immune responses that lead to complete protection against this pathogen.
Dupilumab effectively and rapidly treats bullous pemphigoid by inhibiting the activities of multiple cell types
Authors: Yan Tianmeng , Xie Yinghan , Liu Yuhua , Shan Ying , Wu Xiaoyan , Wang Jing , Zuo Ya-Gang , Zhang Zhenying 
Published: July 2023

BackgroundBullous pemphigoid (BP) is an autoimmune skin-blistering disease. Systemic corticosteroids remain the first line treatment for moderate-to-severe BP with the potential for severe adverse events. Dupilumab has emerged as an alternative option for BP patients.ObjectiveWe evaluated the efficiency and safety of dupilumab on BP treatment and explored a mode of drug action in depth.Methods and resultsA multicenter retrospective cohort included 20 BP patients who received dupilumab with or without systemic corticosteroid in dupilumab group, and 20 matched BP patients who received corticosteroid alone in conventional group. Serum samples were collected from 20 patients (10 from dupilumab group and 10 from conventional group) at baseline and week 4. Compared to systemic corticosteroid alone, dupilumab with or without systemic corticosteroid was similarly efficacious in clinical remission at week4 (complete remission plus partial remission: 100%) and week24 (complete remission plus partial remission:100%), but allowing significant decreases in the cumulative doses of corticosteroids with reducing the incidence of adverse events. However, dupilumab did not decrease BP180 antibody despite an obvious clinical improvement. Comparative plasma proteomic analysis performed before and after treatment in 3 BP patients from dupilumab group revealed that drug use was associated with 30 differentially expressed proteins, including 26 down-regulated and 4 up-regulated proteins. The former consisted of immune related proteins involved in T/B cell interactions (inducible T-cell co-stimulator ligand, ICOSL) and in the activation of eosinophils (PRG2), mast cells (S100A12), and complement (CR2). TARC and ICOSL levels correlated with BP severity in patients who received either dupilumab or conventional treatment.ConclusionDupilumab has similar efficacy in treating BP as conventional drugs, by inhibiting the activities of many types of immune cells and complement, and regulating the interactions between T and B cells.
Association between FGA gene polymorphisms and coronary artery lesion in Kawasaki disease
Authors: Liu Xingzhu , Chen Yanfei , Yang Yanfei , Su Zhongjian , Wang Feng , Zhanghuang Chenghao , Wu Yuqin , Zhang Xing 
Published: July 2023

ObjectiveTo investigate the correlation between FGA gene polymorphisms and coronary artery lesion in Kawasaki disease.MethodsTwo hundred and thirty four children with Kawasaki disease (KD group), 200 healthy children (normal group) and 208 children with non-KD fever (fever group) were enrolled. General clinical indicators, the concentration of serum MMPs, TIMP-1, FG-α,fibrinogen level, molecular function (FMPV/ODmax) and FGA Thr312Ala polymorphism were detected individually by testing peripheral venous blood after fasting in the morning.ResultsThere was no significant difference in average age among the three groups, which were 3.03 ± 1.22 years, 3.17 ± 1.30 years, and 3.21 ± 1.31 years, respectively. Compared with those in the fever group, the levels of white blood cell count (WBC), platelet count (PLT), procalcitonin (PCT), C-reactive protein (CRP), erythrocyte sedimentation rate (ESR), interleukin-6 (IL-6), monocyte chemoattractant protein-1 (MCP-1), and fibrinogen (Fg) levels were significantly increased in the KD group. Red blood cell count (RBC) and hemoglobin (Hb) levels were significantly decreased (p &lt; 0.05).The concentration of serum MMPs, TIMP-1, and FG-α in the KD and fever groups were significantly higher than those in the normal group (p &lt; 0.05). The concentration of MMP-2, MMP-3, MMP-9, MMP-13, TIMP-1, and FG-α in the KD group were significantly higher than those in the fever group (p &lt; 0.05).The KD group was divided into two subgroups,55 patients with combined CAL and 179 patients without combined CAL. The plasma fibrinogen concentration in the combined CAL group was significantly higher than that in the non-combined CAL and normal groups (p &lt; 0.01). There was no statistically significant difference in FMPV/ODmax among the three groups (p &gt; 0.05). Compared with normal group, the FGA GG, GA, and AA genotype and G, A allele frequency of the FGA gene polymorphism in the KD group showed no significant difference (p &gt; 0.05). In the KD group, the most common type in children with CAL was GA, while the most common type in children without CAL was GG.ConclusionMMPs and FG-α were significantly upregulated in KD patients. The proportion of FGA genotype GA in children with CAL was significantly higher than that in children without CAL, suggesting that FGA gene polymorphisms affect coronary artery lesion in children with KD.
The efficacy and safety of haloperidol for the treatment of delirium in critically ill patients: a systematic review and meta-analysis of randomized controlled trials
Authors: Huang Jian , Zheng Hui , Zhu Xianfeng , Zhang Kai , Ping Xiaofeng 
Published: July 2023

PurposeDelirium is common during critical illness and is associated with poor outcomes. Therefore, we conducted this meta-analysis to investigate the efficacy and safety of haloperidol for the treatment of delirium in critically ill patients.MethodsRandomized controlled trials enrolling critically ill adult patients to compare haloperidol with placebo were searched from inception through to February 20th, 2023. The primary outcome were delirium-free days and overall mortality, secondary outcomes were length of intensive care unit stay, length of hospital stay, and adverse events.ResultsNine trials were included in our meta-analysis, with a total of 3,916 critically ill patients. Overall, the pooled analyses showed no significant difference between critically ill patients treated with haloperidol and placebo for the delirium-free days (MD −0.01, 95%CI −0.36 to 0.34, p = 0.95, I2 = 30%), overall mortality (OR 0.89, 95%CI 0.76 to 1.04, p = 0.14, I2 = 0%), length of intensive care unit stay (MD −0.06, 95%CI −0.16 to 0.03, p = 0.19, I2 = 0%), length of hospital stay (MD −0.06, 95%CI −0.61 to 0.49, p = 0.83, I2 = 0%), and adverse events (OR 0.90, 95%CI 0.60 to 1.37, p = 0.63, I2 = 0%).ConclusionAmong critically ill patients, the use of haloperidol as compared to placebo has no significant effect on delirium-free days, overall mortality, length of intensive care unit and/or hospital stay. Moreover, the use of haloperidol did not increase the risk of adverse events.
Altered interhemispheric functional connectivity in patients with comitant exotropia before and after surgery: a resting-state fMRI study
Authors: Chen Xiang-Xun , Chen Wen , Hu Hao , Zhao Meng , Liu Hu , Xu Xiao-Quan , Wu Fei-Yun , Wang Jie 
Published: July 2023

PurposeTo assess the interhemispheric homotopic connectivity alterations in patients with comitant exotropia (CE) before and after surgery, using resting-state functional magnetic resonance imaging (rs-fMRI) with voxel-mirrored homotopic connectivity (VMHC).MethodsThirty-four patients with CE and twenty-four well-matched healthy controls (HCs) were enrolled to undergo a preoperative rs-fMRI scan. The rs-fMRI scan was performed again in twenty-four patients 1 month after surgery. The VMHC method was applied to evaluate the group differences of interhemispheric functional connectivity. The correlations between VMHC values and clinical variables were analyzed in the patient group.ResultsCompared with HCs, 34 patients with CE showed significantly increased VMHC values in occipital lobe (cuneus/superior occipital gyrus/middle occipital gyrus/calcarine), cerebellar area 8/cerebellar Crus1 area, and cerebellar Crus1 area. In CE group, VMHC in the cuneus was positively correlated with stereoacuity (r = 0.417, P = 0.014), meanwhile VMHC in the cerebellar Crus1 area was positively correlated with stereoacuity (r = 0.395, P = 0.021). One month after surgery, the 24 CE patients with follow-up showed decreased VMHC values in the cuneus and superior occipital gyrus compared with preoperative collection, meanwhile, non-significant difference compared with HCs.ConclusionOur study revealed the interhemispheric homotopic connectivity changes of patients with CE in the occipital lobe and cerebellum before and after surgery. The findings may provide a new perspective for the neurological alterations of CE.
Utilization of clinical and radiological parameters to predict cognitive prognosis in patients with mild-to-moderate traumatic brain injury
Authors: Wang Xi , Hui Xiaobo , Wang Xiangyu , Huang Baosheng , Gan Xiaokui , Liu Xingdong , Shen Zhiyan , Sun Yi , Li Lixin 
Published: July 2023

BackgroundCognitive impairment is a common sequela following traumatic brain injury (TBI). This study aimed to identify risk factors for cognitive impairment after 3 and 12 months of TBI and to create nomograms to predict them.MethodsA total of 305 mild-to-moderate TBI patients admitted to the First Affiliated Hospital with Nanjing Medical University from January 2018 to January 2022 were retrospectively recruited. Risk factors for cognitive impairment after 3 and 12 months of TBI were identified by univariable and multivariable logistic regression analyses. Based on these factors, we created two nomograms to predict cognitive impairment after 3 and 12 months of TBI, the discrimination and calibration of which were validated by plotting the receiver operating characteristic (ROC) curve and calibration curve, respectively.ResultsCognitive impairment was detected in 125/305 and 52/305 mild-to-moderate TBI patients after 3 and 12 months of injury, respectively. Age, the Glasgow Coma Scale (GCS) score, &gt;12 years of education, hyperlipidemia, temporal lobe contusion, traumatic subarachnoid hemorrhage (tSAH), very early rehabilitation (VER), and intensive care unit (ICU) admission were independent risk factors for cognitive impairment after 3 months of mild-to-moderate TBI. Meanwhile, age, GCS score, diabetes mellitus, tSAH, and surgical treatment were independent risk factors for cognitive impairment after 12 months of mild-to-moderate TBI. Two nomograms were created based on the risk factors identified using logistic regression analyses. The areas under the curve (AUCs) of the two nomograms to predict cognitive impairment after 3 and 12 months of mild-to-moderate TBI were 0.852 (95% CI [0.810, 0.895]) and 0.817 (95% CI [0.762, 0.873]), respectively.ConclusionTwo nomograms are created to predict cognitive impairment after 3 and 12 months of TBI. Age, GCS score, &gt;12 years of education, hyperlipidemia, temporal lobe contusion, tSAH, VER, and ICU admission are independent risk factors for cognitive impairment after 3 months of TBI; meanwhile, age, the GCS scores, diabetes mellitus, tSAH, and surgical treatment are independent risk factors of cognitive impairment after 12 months of TBI. Two nomograms, based on both groups of factors, respectively, show strong discriminative abilities.