bluuebunny/crossref_metadata_2025_split huggingface dataset:
Nature of the galaxies on top of quasars producing Mg ii absorption
Authors: Guha Labanya Kumar , Srianand Raghunathan 
Published: December 2022

ABSTRACT
Quasar–galaxy pairs at small separations are important probes of gas flows in the disc–halo interface in galaxies. We study host galaxies of 198 Mg ii absorbers at 0.39 ≤ zabs ≤ 1.05 that show detectable nebular emission lines in the Sloan Digital Sky Survey (SDSS) spectra. We report measurements of impact parameter (5.9 ≤ D [kpc] ≤ 16.9) and absolute B-band magnitude (−18.7 ≤ MB ≤ −22.3 mag) of host galaxies of 74 of these absorbers using multiband images from the Dark Energy Spectroscopic Instrument (DESI) Legacy Imaging Survey, more than doubling the number of known host galaxies with D ≤ 17 kpc. This has allowed us to quantify the relationship between Mg ii rest equivalent width (W2796) and D, with best-fitting parameters of W2796 (D = 0) = 3.44 ± 0.20 Å and an exponential scale length of 21.6$^{+2.41}_{-1.97}\, \mathrm{ kpc}$. We find a significant anticorrelation between MB and D, and MB and W2796, consistent with the brighter galaxies producing stronger Mg ii absorption. We use stacked images to detect average emissions from galaxies in the full sample. Using these images and stacked spectra, we derive the mean stellar mass (9.4 ≤ log(M*/M⊙) ≤ 9.8), star formation rate (2.3 ≤ SFR [M⊙ yr−1] ≤ 4.5), age (2.5–4 Gyr), metallicity (12 + log(O/H) ∼ 8.3), and ionization parameter (log q [cm s−1] ∼ 7.7) for these galaxies. The average M* found is less than that of Mg ii absorbers studied in the literature. The average SFR and metallicity inferred are consistent with that expected in the main sequence and the known stellar mass–metallicity relation, respectively. High spatial resolution follow-up spectroscopic and imaging observations of this sample are imperative for probing gas flows close to the star-forming regions of high-z galaxies.
Impact of a binary black hole on its outer circumbinary disc
Authors: Mignon-Risse Raphaël , Varniere Peggy , Casse Fabien 
Published: December 2022

ABSTRACTAccreting supermassive binary black holes (SMBBHs) are potential targets for multimessenger astronomy as they emit gravitational waves (GW) while their environment emits electromagnetic (EM) waves. In order to get the most out of a joint GW–EM detection we first need to obtain theoretically predicted EM signals unambiguously linked to BBHs. In that respect, this is the first of a series of papers dedicated to accreting pre-merger BBHs and their associated EM observables. Here, we extend our Numerical Observatory of Violent Accreting systems, e-NOVAs, to any space–time. Unlike previous studies, almost exclusively focused on the inner regions, we investigated the impact of the BBH on its outer circumbinary disc, located in the radiation (or wave) zone, after implementing an approximate analytical space–time of spinning, inspiralling BBHs in e-NOVAs. We follow the formation of a weak spiral structure in disc density arising from the retardation effects in the radiation zone metric. Simulation data are then post-processed with a general-relativistic ray-tracing code incorporating the same BBH space–time, assuming SMBBH sources. The density spiral creates a small $({\lt }1{{\ \rm per\ cent}})$ but unambiguous modulation of the light curve at the semi-orbital period. This signal, although weak, is fundamentally different from that of an axisymmetric disc around a single BH providing a lower limit on the impact of a BBH on its outer disc. This potential difference being found, we study how binary parameters impact this modulation in order to find the optimal case which is a high source inclination of any binary mass ratio (from 0.1 to 1).
From X-rays to physical parameters: a comprehensive analysis of thermal tidal disruption event X-ray spectra
Authors: Mummery Andrew , Wevers Thomas , Saxton Richard , Pasham Dheeraj 
Published: December 2022

ABSTRACT
We perform a comprehensive analysis of a population of 19 X-ray bright tidal disruption events (TDEs), fitting their X-ray spectra with a new, physically self-consistent, relativistic accretion disc model. Not all of the TDEs inhabit regions of parameter space where the model is valid, or have sufficient data for a detailed analysis, and physically interpretable parameters for a subsample of 11 TDEs are determined. These sources have thermal (power-law free) X-ray spectra. The radial sizes measured from these spectra lie at values consistent with the innermost stable circular orbit of black holes with masses given by the MBH–σ relationship, and can be used as an independent measurement of MBH. The bolometric disc luminosity can also be inferred from X-ray data. All of the TDEs have luminosities that are sub-Eddington (Lbol, disc ≲ Ledd), and larger than the typical hard-state transitional luminosity of X-ray binary discs (Lbol, disc ≳ 0.01Ledd). The peak bolometric luminosity is found to be linearly correlated with the MBH–σ mass. The TDE X-ray-to-bolometric correction can reach values up to ∼100, and grows exponentially at late times, resolving the missing energy problem. We show that the peak disc luminosities of some TDEs are smaller than their observed optical luminosities, implying that not all of the early time optical emission can be sourced from reprocessed disc emission. Our results are supportive of the hypothesis that thermal X-ray bright TDEs are in accretion states analogous to the ‘soft’ accretion state of X-ray binaries, and that black hole accretion processes are scale (mass) invariant.
Investigation of the dependence of angular momentum transport on spatial scales for construction of differential rotation
Authors: Mori K , Hotta H 
Published: December 2022

ABSTRACT
We investigate the dependence of the angular momentum transport (AMT) on the spatial scales with numerical simulation of solar-like stars. It is thought that turbulence has an essential role in constructing solar differential rotation (DR). In a widely used method to analyse the construction mechanism of DR, the flow is divided into two components, ‘mean flow’ and ‘turbulence’, where ‘turbulence’ includes a broad spectrum of spatial scales. The features of the AMT are expected to depend on the scale. In this study, we decompose the angular momentum flux (AMF) to investigate the dependence of the AMF on the spatial scale. We compare the results with anti-solar (fast pole) and solar-type (fast equator) DR. Our conclusions are summarized as (1) Radially outward AMT is seen on a large scale (60 Mm ≤ L &lt; 120 Mm) in rotationally constrained systems. (2) Even when the scale-integrated AMF is negative, we sometimes observe positive AMF on certain scales. (3) Small-scale turbulence tends to transport the angular momentum radially inward and causes the anti-solar DR, indicating that high-resolution simulation is a negative factor for solar-like DR. Our method to decompose the AMF provides a deep understanding of the angular momentum and construction mechanism of DR.
Teak plantations are complementary habitat for the Green Peafowl movement within the fragmented Bago Yoma range, south-central Myanmar
Authors: Win Lay , Sukumal Niti , Shwe Nay Myo , Savini Tommaso 
Published: December 2022

AbstractHabitat loss, degradation, and fragmentation following intensive agricultural expansion, and both legal and illegal logging, have contributed to the rapid decline of the Green Peafowl (Pavo muticus) over mainland Southeast Asia. Dry forest habitat in the Bago Yoma range (Myanmar) is considered one of the region’s last remaining strongholds for the species. However, the area has been fragmented over the past years, mostly due to large-scale teak (Tectona grandis) plantations. This study aimed to estimate the Green Peafowl population in the Bago Yoma range with a particular focus on the use of large-scale teak plantations as possible complementary habitat for the species. The survey was conducted over 47 line transects located in the natural forest and teak plantations. The average estimated density, using distance sampling, was 0.800 calling males km–2 across the whole survey area. Estimated densities were similar within the natural forest and teak plantations (0.825 and 0.866 calling males km–2, respectively), suggesting an extensive use of this crop by Green Peafowl. The remaining suitable habitat covered an area of 8,554 km2 divided into 8 large forest patches (&gt;40 km2). When including large-scale teak plantations in the landscape matrix, more suitable habitat fragments could be connected to each other, with the remaining suitable habitat grouped into 6 large forest patches. These results suggest teak plantations could be used for connecting remaining forest patches and improving fragmented natural habitats for Green Peafowl.
Magneto-structural phase transition in exfoliated pyrrhotite (Fe7S8) ultra-thin sheets
Authors: Puthirath Balan Aravind , Oliveira Eliezer F , Costin Gelu , Gray Tia , Chakingal Nithya , Biswas Abhijit , Puthirath Anand B 
Published: December 2022

Abstract
Non-van der Waals (n-vdW) 2D materials are gaining popularity due to their exciting confinement-enhanced properties for magnetic, catalytic and optoelectronic applications. The recent discovery of mechanical and liquid exfoliation of n-vdW materials along the cleavage planes, owing to the very low scission energies, is encouraging and opens the avenue for further exploration of n-vdW materials having exceptional properties. Herein, we successfully isolated a few layers of pyrrhotite (Fe7S8) nanosheets from bulk mineral ore by means of liquid phase exfoliation in organic solvent and studied the magnetic ordering at bulk and exfoliated samples. Both experimental and first principle theoretical investigations point out confinement-induced magneto-structural phase transition from ferromagnetic monoclinic (4M) to antiferromagnetic hexagonal (3T) characterized by the suppression of Besnus transition.
Quantifying resilience and the risk of regime shifts under strong correlated noise
Authors: Heßler Martin , Kamps Oliver 
Published: December 2022

AbstractEarly warning indicators often suffer from the shortness and coarse-graining of real-world time series. Furthermore, the typically strong and correlated noise contributions in real applications are severe drawbacks for statistical measures. Even under favourable simulation conditions the measures are of limited capacity due to their qualitative nature and sometimes ambiguous trend-to-noise ratio. In order to solve these shortcomings, we analyze the stability of the system via the slope of the deterministic term of a Langevin equation, which is hypothesized to underlie the system dynamics close to the fixed point. The open-source available method is applied to a previously studied seasonal ecological model under noise levels and correlation scenarios commonly observed in real world data. We compare the results to autocorrelation, standard deviation, skewness, and kurtosis as leading indicator candidates by a Bayesian model comparison with a linear and a constant model. We show that the slope of the deterministic term is a promising alternative due to its quantitative nature and high robustness against noise levels and types. The commonly computed indicators apart from the autocorrelation with deseasonalization fail to provide reliable insights into the stability of the system in contrast to a previously performed study in which the standard deviation was found to perform best. In addition, we discuss the significant influence of the seasonal nature of the data to the robust computation of the various indicators, before we determine approximately the minimal amount of data per time window that leads to significant trends for the drift slope estimations.
Model of inverse bleb growth explains giant vacuole dynamics during cell mechanoadaptation
Authors: Cairoli Andrea , Spenlehauer Alice , Overby Darryl R , Lee Chiu Fan 
Published: December 2022

AbstractCells can withstand hostile environmental conditions manifest as large mechanical forces such as pressure gradients and/or shear stresses by dynamically changing their shape. Such conditions are realized in the Schlemm’s canal of the eye where endothelial cells that cover the inner vessel wall are subjected to the hydrodynamic pressure gradients exerted by the aqueous humor outflow. These cells form fluid-filled dynamic outpouchings of their basal membrane called giant vacuoles. The inverses of giant vacuoles are reminiscent of cellular blebs, extracellular cytoplasmic protrusions triggered by local temporary disruption of the contractile actomyosin cortex. Inverse blebbing has also been first observed experimentally during sprouting angiogenesis, but its underlying physical mechanisms are poorly understood. Here, we hypothesize that giant vacuole formation can be described as inverse blebbing and formulate a biophysical model of this process. Our model elucidates how cell membrane mechanical properties affect the morphology and dynamics of giant vacuoles and predicts coarsening akin to Ostwald ripening between multiple invaginating vacuoles. Our results are in qualitative agreement with observations from the formation of giant vacuoles during perfusion experiments. Our model not only elucidates the biophysical mechanisms driving inverse blebbing and giant vacuole dynamics, but also identifies universal features of the cellular response to pressure loads that are relevant to many experimental contexts.
Reprogramming of ovarian aging epigenome by resveratrol
Authors: Gou Mo , Li Jie , Yi Lizhi , Li Huiyu , Ye Xiaoying , Wang Huasong , Liu Linlin , Sun Baofa , Zhang Song , Zhu Zhengmao , Liu Jiang , Liu Lin 
Published: December 2022

Abstract
Resveratrol is an antiaging, antioxidant, and anti-inflammatory natural polyphenolic compound. Growing evidence indicates that resveratrol has potential therapeutic effects for improving aging ovarian function. However, the mechanisms underlying prolonged reproductive longevity remain elusive. We found that resveratrol ameliorates ovarian aging transcriptome, some of which are associated with specific changes in methylome. In addition to known aging transcriptome of oocytes and granulosa cells such as decline in oxidoreductase activity, metabolism and mitochondria function, and elevated DNA damage and apoptosis, actin cytoskeleton are notably downregulated with age, and these defects are mostly rescued by resveratrol. Moreover, the aging-associated hypermethylation of actin cytoskeleton is decreased by resveratrol. In contrast, deletion of Tet2, involved in DNA demethylation, abrogates resveratrol-reprogrammed ovarian aging transcriptome. Consistently, Tet2 deficiency results in additional altered pathways as shown by increased mTOR and Wnt signaling, as well as reduced DNA repair and actin cytoskeleton with mouse age. Moreover, genes associated with oxidoreductase activity and oxidation–reduction process were hypermethylated in Tet2-deficient oocytes from middle-age mice treated with resveratrol, indicating that loss of Tet2 abolishes the antioxidant effect of resveratrol. Taking together, our finding provides a comprehensive landscape of transcriptome and epigenetic changes associated with ovarian aging that can be reprogrammed by resveratrol administration, and suggests that aberrantly increased DNA methylation by Tet2 deficiency promotes additional aging epigenome that cannot be effectively restored to younger state by resveratrol.
Efficient delivery ofFMR1across the blood brain barrier using AAVphp construct in adultFMR1KO mice demonstrates the feasibility of gene therapy for fragile X syndrome
Authors: Chadman Kathryn K. , Adayev Tatyana , Udayan Aishwarya , Ahmed Rida , Dai Chun-Ling , Goodman Jeffrey H. , Meeker Harry , Dolzhanskaya Natalia , Velinov Milen 
Published: December 2022

AbstractBackgroundFragile X syndrome (FXS) is the most common inherited cause of intellectual disability and autism. Gene therapy may offer an efficient method to ameliorate symptoms of the disorder.MethodsAn AAVphp.eb-hSyn-mFMR1IOS7 vector and an empty control were injected in the tail vein ofFmr1knock out (KO) mouse and wildtype (WT) controls. KO mice were injected with 2 × 1013vg/kg of the construct. Control KO and WT mice were injected with empty vector. After treatment the animals underwent a battery of tests: open field, marble burying, rotarod, and fear conditioning. Mouse brains were studied for levels of theFmr1product, FMRP.ResultsSignificant levels of FMRP were not found outside the CNS in treated animals. The gene delivery was highly efficient, where it exceeded the control FMRP levels in all tested brain regions. There was also improved performance in the rotarod test and partial improvements on other tests in the treated KO animals.ConclusionThese experiments demonstrate efficient, brain-specific delivery ofFmr1via peripheral administration in adult mice. The gene delivery led to partial alleviation of the Fmr1 KO phenotypical behaviors. FMRP oversupply may explain why not all behaviors were significantly affected. Since AAV.php vectors are less efficient in humans than the mice used in the current experiment, studies to determine the optimal dose and using human suitable vectors will be necessary to further demonstrate feasibility.
Development of a shortwave infrared (SWIR) sinuscope for the detection of cerebrospinal fluid (CSF) leaks
Authors: Klein Tjadina-W. , Yang Stella , Tusty Mahbuba A. , Nayak Jayakar V. , Chang Michael T. , Bruns Oliver T. , Bischof Thomas S. , Valdez Tulio A. 
Published: December 2022

AbstractSignificanceCSF rhinorrhea (leakage of brain fluid from the nose) can be difficult to identify and currently requires invasive procedures such as intrathecal fluorescein which requires a lumbar drain placement. Fluorescein is also known to have rare but significant side effects including seizures and death. As the number of endonasal skull base cases increase, the number of CSF leaks have also increased for which an alternative diagnostic method would be highly advantageous to patients.AimTo develop an instrument to identify CSF leaks based on water absorption in the SWIR without the need of intrathecal contrast agents. This device needed to be adapted to the anatomy of the human nasal cavity while maintaining low weight and ergonomic characteristics of current surgical instruments.ApproachAbsorption spectra of CSF and artificial CSF were obtained to characterize the absorption peaks that could be targeted with SWIR light. Different illumination systems were tested and refined prior to adapting them into a portable endoscope for testing in 3D printed models and cadavers for feasibility.ResultsWe identified CSF to have an identical absorption profile as water. In our testing, a narrow band laser source at 1480nm proved superior to using a broad 1450 nm LED. Using a SWIR enabling endoscope set up, we tested the ability to detect artificial CSF in a cadaver model.ConclusionsAn endoscopic system based on SWIR narrow band imaging can provide an alternative in the future to invasive methods of CSF leak detection.
The phylogenetic history of theGorteria diffusaradiation sheds light on the origins of plant sexual deception
Authors: Delahaie Boris , Mellers Gregory , Kellenberger Roman T. , Fernández-Mazuecos Mario , Fattorini Róisín , Brockington Samuel F. , Ellis Allan G. , Glover Beverley J. 
Published: December 2022

AbstractThe morphologically diverse daisy speciesGorteria diffusaemploys varying levels of sexually deceptive pollination. The species comprises at least fifteen spatially and phenotypically discrete floral morphotypes that are associated with a range of pollination strategies, from generalism to highly specialised sexual deception involving visual mimicry of females of the bee-flyMegapalpus capensis. However, the pattern of evolution of the unique floral traits in this lineage remains unknown because the phylogenetic history of the closely related floral morphotypes has proved unresolvable using traditional approaches. Here we apply genotyping-by-sequencing (GBS), a reduced representation sequencing technology that has significantly increased the tractability of phylogenetic problems involving recent radiations, to the recalcitrant phylogenetic problem ofGorteriaacross its South African distribution. Population genomic analyses show that individuals group according to morphotype, irrespective of geographic proximity, highlighting the distinctiveness of the morphotypes at the genetic level. We resolve the phylogenetic history of the closely related morphotypes, demonstrating that they are mostly well supported monophyletic entities that are grouped into at least three distinct geographically separated clades. Our results suggest that both incomplete lineage sorting and introgression across geographical clades have previously hindered reconstruction of the phylogeny of this species complex that has diversified rapidly during the Quaternary. Sexual deception is a phylogenetically derived pollination strategy within the complex that evolved at least twice, and was likely achieved by sequential evolution of a set of floral traits that in combination elicit sexual responses from the bee-fly pollinator. While insight into the evolution of sexual deception has been limited by strong phylogenetic conservatism of this strategy in other plant lineages, our results both provide the framework, and confirm the utility ofG. diffusa, for further understanding the genetic pathways and selective pressures underlying the complex phenotypes required to exploit insect mating behaviour for pollination.
Transcutaneous electrical nerve stimulation acutely impacts motor unit firing activity during isometric contractions
Authors: Avrillon Simon , Hernandez-Pavon Julio C. , Kurukuti Nish M. , Hoo Grace W. , Pons José L. 
Published: December 2022

AbstractA low intensity electrical current delivered transcutaneously at a high frequency over a muscle can acutely recruit motor units in a physiological order by activating peripheral sensory pathways. This method has been used in patients to reduce tremor or supplement motor function, leading to the development of therapies and products.We aimed to better understand how the stimulation of the median nerve, the contralateral first dorsal interosseus muscle (FDI), and the combination of these two paradigms impact the motor unit activity from the FDI muscle. We identified and tracked the same motor units across the conditions and compared the electromyographic amplitude, motor unit discharge rates, and the degree of correlation between fast and slow oscillations of motor unit discharge rates.We found that the stimulation of the FDI muscle can acutely increase the electromyographic amplitude of the homonymous muscle on the contralateral side (F = 20.4; p < 0.001) while the discharge rate of motor units did not differ between the control and the stimulation condition (F = 0.2; p = 0.806). We did not observe any significant effect of the stimulation on the ratio of pairs of motor units with a significant correlation, showing that the stimulation barely impacted the distribution of correlated inputs to the pool of motor units. We did not observe short-term effects of the stimulation once it was discontinued. Overall, these results showed that the specific stimulation of peripheral sensory pathways can acutely impact motor unit firing activity without disturbing the neural control of force.New & NoteworthyWe identified and tracked the same motor units across stimulation and control conditions using high-density electromyography. We found that the specific stimulation of peripherial sensory pathways can acutely impact motor unit firing activity, likely due to the recruitment of additional motor units. At the same time, the degree of correlation between fast and slow oscillations of motor unit discharge rates was stable, limiting the disturbance of the neural control of force.