bluuebunny/crossref_metadata_2025_split huggingface dataset:
Fig. S6 from Metastatic Conditioning of Myeloid Cells at a Subcutaneous Synthetic Niche Reflects Disease Progression and Predicts Therapeutic Outcomes
Authors: Oakes Robert S. , Bushnell Grace G. , Orbach Sophia M. , Kandagatla Pridvi , Zhang Yining , Morris Aaron H. , Hall Matthew S. , LaFaire Petrina , Decker Joseph T. , Hartfield Rachel M. , Brooks Michael D. , Wicha Max S. , Jeruss Jacqueline S. , Shea Lonnie D. 
Published: April 2023

<p>Statistical plots to support heatmaps in main text and supplementary materials. (a) Box plots for gene panel heatmap in Fig. 1f show the median, 25th-75th percentiles and most extreme data points that were not considered outliers (outliers are visually indicated by red +). TB cohort expression is centered relative to the time-matched TFC cohort median. Scale depicts the log2-transformed fold change. A two-way MANOVA showed a significant interaction effect between condition and time (Pillai's Trace=1.276, F(20,28)=2.465, p=0.014). Post hoc univariate ANOVA showed significant differences within the diseased cohort over time (indicated by #, df=(2,22), p<0.05). Simple effects analysis showed significant differences between diseased and time-matched TFC (indicated by *, Å idÃ¡k adjusted p<0.05 adjusted). (b) Tumor growth curve for 4T1 mice starting at Day 7, with a power regression line, error bars are standard deviation. (c) Box plots of gene expression to support the data in the C57BL/6-Lu.2 heatmap in Fig. 2b. * indicates significance (Dunn-Å idÃ¡k corrected to p<0.005) from independent two-tailed t-tests comparing TB to TFC (n=5 per condition). (d) Box plots of gene expression for blood data to support the heatmap found in Fig. 1. Tumor-bearing Implant Free Controls (IFCs) are shown to illustrate that the implants do not alter the gene expression of blood leukocytes. A two-way MANOVA showed a significant interaction effect between condition and time (Pillai's Trace=2.527, F(36,40)=1.907, p=0.024). Post hoc univariate and simple effects analysis showed significant differences within the diseased cohort over time as indicated as # (df=(2,15), p<0.001) and * indicates significant differences compared to time matched controls (Å idÃ¡k adjusted p<0.05 adjusted). (e) Gene expression data from the lung tissue heatmap in Fig. 2a. * indicates significance (Dunn-Å idÃ¡k corrected to p<0.005) from independent two-tailed t-tests comparing TB to TFC (n=4 per condition). For full statistical values see Data File 4 for exact F and p values.</p>
Supplementary Data from Loss of SDHB Promotes Dysregulated Iron Homeostasis, Oxidative Stress, and Sensitivity to Ascorbate
Authors: Goncalves Judith , Moog Sophie , Morin Aurélie , Gentric Géraldine , Müller Sebastian , Morrell Alexander P. , Kluckova Katarina , Stewart Theodora J. , Andoniadou Cynthia L. , Lussey-Lepoutre Charlotte , Bénit Paule , Thakker Alpesh , Vettore Lisa , Roberts Jennie , Rodriguez Raphaël , Mechta-Grigoriou Fatima , Gimenez-Roqueplo Anne-Paule , Letouzé Eric , Tennant Daniel A. , Favier Judith 
Published: April 2023

<p>-	Supplementary Figure 1 -	Supplementary Figure 2 -	Supplementary Figure 3 -	Supplementary Figure 4 -	Supplementary Figure 5 -	Supplementary Figure 6 -	Supplementary Table 1 -	Supplementary Table 2 -	Supplementary Table 3 -	Supplementary Table 4 -	Supplementary Methods -</p>
Figure S5 from An AIB1 Isoform Alters Enhancer Access and Enables Progression of Early-Stage Triple-Negative Breast Cancer
Authors: Sharif Ghada M. , Campbell Moray J. , Nasir Apsra , Sengupta Surojeet , Graham Garrett T. , Kushner Max H. , Kietzman William B. , Schmidt Marcel O. , Pearson Gray W. , Loudig Olivier , Fineberg Susan , Wellstein Anton , Riegel Anna T. 
Published: April 2023

<p>A)	Principal component analyses of RNA-Seq from MCFDCIS and MCF10A cell lines and the AIB1Î"4 corresponding clones. B)	Relapse free survival and overall survival KM-plots in patients with ER-negative breast tumors separated by AIB1Î"4 top regulated genes in MCFDCIS cells. AIB1Î"4 signature gene list used to generate the KM-plots is in Supplementary table S3. C)	Volcano plots illustrating differentially expressed genes (DEGs) regulated by AIB1Î"4 in MCF10A cell clones (|log2(FC)|>1.5 and -log(adj p-val)>1.3). Full list of DEGs in Supplementary table S1. D)	Significantly enriched hallmark pathways from gene set enrichment analyses (GSEA) associated with AIB1Î"4 expression in MCF10A cells. Full list of enriched pathways in Supplementary table S2. E)	Top canonical pathways altered in MCF10A-Î"4 compared to control MCF10A cells identified by Ingenuity Pathway Analysis (IPA). |z-score|>1, p-val <0.05. F)	Relapse free survival KM-plots in patients with ER-negative breast tumors separated by AIB1Î"4 top regulated genes in MCF10A cells. AIB1Î"4 signature gene list used to generate the KM-plots in Supplementary table S3. G)	Western blot of EMT markers of DCIS cells induced by DCIS-Î"4 for the indicated times. Actin is used as a loading control. Band quantification is indicated in red. H)	A volcano plot illustrating differentially expressed genes (DEGs) in MCFDCIS-Î"4 when co-cultured with MCFDCIS compared to MCFDCIS-Î"4 alone. Mixed cells were then separated by flow cytometry prior to RNA-seq analysis. (|log2(FC)|>1.5 and -log(adj p-val)>1.3). Full list of DEGs in Supplementary table S1.</p>
Figure S4 from An AIB1 Isoform Alters Enhancer Access and Enables Progression of Early-Stage Triple-Negative Breast Cancer
Authors: Sharif Ghada M. , Campbell Moray J. , Nasir Apsra , Sengupta Surojeet , Graham Garrett T. , Kushner Max H. , Kietzman William B. , Schmidt Marcel O. , Pearson Gray W. , Loudig Olivier , Fineberg Susan , Wellstein Anton , Riegel Anna T. 
Published: April 2023

<p>A)	FDR-corrected shared and unique ChIP peaks of AIB1 and AIB1Î"4 in MCF10A parental cell line (10A) versus AIB1Î"4-expressing isogenic line (10A-Î"4). Shared peaks have at least 1bp overlap. B)	AIB1 ChIP peaks in MCF7 cells treated for 3 hours with estradiol (E2) or vehicle (V) overlapped with MCF10A and MCFDCIS (parental and AIB1Î"4 derivative lines). MCF7 data set obtained from Zwart et al(32). C)	Motifs within 200 bp of the peak summit for significant ChIP-Seq peaks were analyzed for motif enrichment using HOMER. In red are the motifs unique to AIB1Î"4 in MCF10A cells. D)	FDR-corrected histone modification peaks in DCIS and DCIS-Î"4 overlapping with enhancer sites from human mammary epithelial cells (hMEC enh.) (42). E)	The distribution of AIB1, H3K27ac or H3K4me1 ChIP peaks 500 kb up- and downstream of gene transcription start site (TSS). Genomic distance was divided into 5kb bins.</p>
Supplementary Tables 1 - 4 from Identification of Circulating MicroRNA Signatures for Breast Cancer Detection
Authors: Chan Maurice , Liaw Chiew Suan , Ji Shen Mo , Tan Hwee Huang , Wong Chow Yin , Thike Aye Aye , Tan Puay Hoon , Ho Gay Hui , Lee Ann Siew-Gek 
Published: April 2023

<p>PDF file - 127K, Supplementary Table S1:	Details of breast cancer patients employed for this study. IDC (NOS), Invasive Ductal Carcinoma (Not Otherwise Specified); DCIS, Ductal Carcinoma In-Situ; ILC, Invasive lobular carcinoma; LN, lymph node status; na, not available; nd, not detected. Supplementary Table S2:	Complete list of significant microRNAs identified from breast cancer tumour and serum samples. Supplementary Table S3:	Complete list of significant breast cancer tumour microRNAs associated with clinicopathological features. Supplementary Table S4: Complete list of significant serum microRNAs associated with clinicopathological features.</p>
A novel multiple access communication protocol for LoRa networks without LoraWAN
Authors: Prasetyo Jeremiah , Musayyanah Musayyanah , Jusak Jusak 
Published: April 2023

Current <span>studies predict there will be approximately 75 billion internet of things (IoT) devices connected to the internet by 2025. Such enormous IoT networks will require efficient communications systems to support those networks running well. We consider one of the emerging communications technologies that is widely used for wireless wide-area network, i.e., long range (LoRa). By default, LoRa wide area networking (LoRaWAN) has been equipped with a medium access control (MAC) protocol, however, several studies showed that LoRaWAN might not be the most excellent choice for certain applications of low-power wide area network, for example, peer-to-peer and mesh networks. In this work, we propose an application layer LoRa multi-communication (LMC) protocol to resolve multiple access problems in LoRa networks without employing LoRaWAN. The algorithm was embedded and tested on energy-constraint devices as building blocks of most IoT systems. Our examination in a controlled environment showed that the proposed algorithm achieved 94% averaged packet reception ratio (PRR) and 33.3 hours longer averaged battery lifetime compared to the default operation (without LMC algorithm) of LoRa networks. The proposed algorithm also introduced longer averaged time on air (ToA) compared to the default LoRa network mainly due to its best-effort service scenario applied to the proposed algorithm.</span>
Lessons from Latin America Dollarization in the Twenty First Century
Authors: Cachanosky Nicolas , Ocampo Emilio , Salter Alexander W. 
Published: April 2023

Abstract
This paper looks at twenty first-century dollarization in Latin America. We emphasize that dollarization is a complex reform that can be implemented in many different ways. We draw three important lessons from these experiences: (1) keeping the central bank after dollarizing is an unnecessary institutional vulnerability that facilitates compulsive de-dollarization, (2) public opinion offers the most important defense of dollarization against populist attempts at reversal, and (3) even if dollarization is not supported with structural reforms (or such reforms are reversed), it remains superior to the counterfactual of no reforms with persistent, high and volatile inflation.
Enrichment of low-grade phosphorites by the selective leaching method
Authors: Raiymbekov Yerkebulan , Abdurazova Perizat , Nazarbek Ulzhalgas 
Published: April 2023

Abstract
The selective leaching method presents a new and innovative approach for the enrichment of low-grade phosphate raw materials. The use of acetic acid as a reagent in the leaching process allows for the selective dissolution of carbonates, potassium-, and aluminum-containing compounds, offering a promising solution for the improvement of the recovery rates of valuable phosphorus compounds. This study presents the results of research on the selective leaching of carbonates from low-grade phosphate raw materials and evaluation of its efficiency using a combination of SEM, energy-dispersion and chemical analysis, X-ray diffraction, differential thermal, IR-Fourier spectroscopic, and mineralogical analysis techniques. The results showed an increase in the content of phosphorus(v) oxide from 14% to 22% through the selective leaching process. The enriched phosphate raw materials were also found to be suitable for the production of phosphorus-containing products. This research highlights the potential of the selective leaching method to overcome the challenges faced in the enrichment of low-grade phosphorites and provide a more efficient and sustainable solution for the industry.
The humor transaction schema: a conceptual framework for researching the nature and effects of humor
Authors: Davis Jessica Milner , Hofmann Jennifer 
Published: April 2023

AbstractThis article presents a schema describing the ‘humor transaction,’ that is, the processes by which what is generally called humor is created, communicated, experienced, responded to and used. It describes in three stages the rich creative process shared between a humorist and an audience. This starts with the perception and/or formation of an amusing stimulus by a humorist and passes in a second stage to its communication by the humorist to others and their processing of the stimulus. The third stage captures the range of experiences and responses by the recipient/s, including personal consequences and possible re-use of the humor (which creates further functions and consequences). Although experiencing and using humor are both holistic processes, dependent on synchronization of social behaviors by humorist and recipient, the schema simplifies in order to summarize the general outline of a typical shared humorous ‘transaction’ while allowing for complex detail within each stage. It offers a framework within which scholars and practitioners can locate their different foci of research and application. It aims to assist in developing a shared vocabulary of concepts and terminology to foster exchange across the many disciplines involved in humor research. It provides a linked glossary of relevant terms designed to facilitate interdisciplinary exchange in studying humor.
Smith-predictor based enhanced Dual-DOF fractional order control for integrating type CSTRs
Authors: Meena Rammurti , Das Dipjyoti , Chandra Pal Vipin , Chakraborty Sudipta 
Published: April 2023

AbstractContinuously Stirred Tank Reactors (CSTR) are one of the widely used reactors in the chemical industry. Controlling such reactors is challenging because many times it demonstrates a model which is having a pole at the origin of the s-plane. Moreover, the presence of a dead time necessitates more effective control measures. This work presents a modified smith predictor-based control for integrating type CSTRs with time delay in order to provide adequate servo and regulatory closed-loop responses. Numerous researches on dual DOF control suggested different controller settings for outer and inner-loop controllers. But, in the current study, both the controllers are proposed to be the same which drastically reduces the complexity of the design. To offer good robustness in the closed-loop response, the controller is synthesized with a user-defined maximum sensitivity. Case studies on CSTRs for both the nominal and disturbed process models are conducted and the same is compared with recently developed control laws. Lastly, a performance comparison on ISE, ITAE, and IAE is provided.
Application of alginate polymer films and coatings incorporated with essential oils in foods: a review of recent literature with emphasis on nanotechnology
Authors: Ghasemi Sajjad , Jaldani Shima , Sanaei Farideh , Ghiafehshirzadi Asiyeh , Alidoost Ahmadreza , Hashemi Mohammad , Hossaeini Marashi Sayed Mahdi , Khodaiyan Faramarz , Noori Seyyed Mohammad Ali 
Published: April 2023

Abstract
Food waste is one of the major challenges in food safety and finding a solution for this issue is critically important. Herein, edible films and coatings became attractive for scientists as they can keep food from spoilage. Edible films and coatings can effectively preserve the original quality of food and extend its shelf life. Polysaccharides, including starch and cellulose derivatives, chitosan, alginate and pectin, have been extensively studied as biopackaging materials. One of the most interesting polysaccharides is alginate, which has been used to make edible films and coatings. Incorporating essential oils (EO) in alginate matrices results in an improvement in some properties of the edible packages, such as antioxidant and antimicrobial properties. Additionally, the use of nanotechnology can improve the desirable properties of edible films and coatings. In this article we reviewed the antimicrobial and antioxidant properties of alginate coatings and films and their use in various food products.
A lattice-transformer-graph deep learning model for Chinese named entity recognition
Authors: Lin Min , Xu Yanyan , Cai Chenghao , Ke Dengfeng , Su Kaile 
Published: April 2023

Abstract
Named entity recognition (NER) is the localization and classification of entities with specific meanings in text data, usually used for applications such as relation extraction, question answering, etc. Chinese is a language with Chinese characters as the basic unit, but a Chinese named entity is normally a word containing several characters, so both the relationships between words and those between characters play an important role in Chinese NER. At present, a large number of studies have demonstrated that reasonable word information can effectively improve deep learning models for Chinese NER. Besides, graph convolution can help deep learning models perform better for sequence labeling. Therefore, in this article, we combine word information and graph convolution and propose our Lattice-Transformer-Graph (LTG) deep learning model for Chinese NER. The proposed model pays more attention to additional word information through position-attention, and therefore can learn relationships between characters by using lattice-transformer. Moreover, the adapted graph convolutional layer enables the model to learn both richer character relationships and word relationships and hence helps to recognize Chinese named entities better. Our experiments show that compared with 12 other state-of-the-art models, LTG achieves the best results on the public datasets of Microsoft Research Asia, Resume, and WeiboNER, with the F1 score of 95.89%, 96.81%, and 72.32%, respectively.
On Recurrences in Generalized Arithmetic Triangle
Authors: Belbachir Hacéne , Bouyakoub Abdelkader , Krim Fariza 
Published: April 2023

AbstractIn the present paper, we consider the generalized arithmetic triangle called GAT which is structurally identical to Pascal’s triangle for which we keep the Pascal’s rule of addition and we replace both legs by two sequences (an)n≥1and (bn)n≥1witha0=b0= Ω. Our goal is to describe the recurrence relation associated to the sum of elements lying along a finite ray in this triangle. As consequences, we obtain some combinatorial properties and we establish that the sum of elements lying along a main rising diagonal is a convolution of generalized Fibonacci sequence and another sequence which one will determine. We also precise the corresponding generating function. Further, we establish some nice identities by using the Morgan-Voyce phenomenon. Finally, we generalize the Golden ratio.
New Insights on the Multivariate Skew Exponential Power Distribution
Authors: Arevalillo Jorge M. , Navarro Hilario 
Published: April 2023

ABSTRACT
The multivariate exponential power is a useful distribution for modeling departures from normality in data by means of a tail weight scalar parameter that regulates the non-normality of the model. The incorporation of a shape asymmetry vector into the model serves to account for potential asymmetries and gives rise to the multivariate skew exponential power distribution. This work is aimed at revisiting the skew exponential power distribution taking as a starting point its formulation as a scale mixture of skew-normal distributions. The paper provides some highlights and theoretical insights on the role played by its parameters to assess two complementary aspects of the multivariate non-normality such as directional asymmetry and tail weight behavior regardless of the asymmetry. The intuition behind both issues relies on well-known mathematical ideas about skewness maximization and convex transform stochastic orderings.
Study on nanocrystalline coating prepared by electro-spraying 316L metal wire and its corrosion performance
Authors: Liu Ye , Song Qiuzhi , Chen Pengwan , Huang Kun , Yang Yixun 
Published: April 2023

Abstract
In this work, we study the corrosion performance of coatings prepared by electrical explosion spraying of metal wires. 316L metal wire with a diameter of 1.5 mm is used as spray material, and the coating is prepared on the 45# steel substrate by electrical explosion spraying. The oil–water corrosion experiment of the coating is carried out in a constant temperature water bath of 60°C for 168 h. The scanning electron microscopy and energy-dispersive spectroscopy results of the experimental samples have shown that some metal oxides are found inside the coating, most of which are distributed at the grain boundaries with a size range of 30–50 nm. The corrosion rate of the coating is measured by weight loss method with a corrosion rate of 0.079 mm/annum. XRD results show that the corrosion generates CaCO3, Fe3O4, and MgFe2O4. Coating corrosion is mainly caused by the formation of electrochemical corrosion between oxides and non-oxides in the coating, and pitting corrosion and intergranular corrosion in the presence of chloride ions.
Die Katzendreckgestank-Affäre
Authors: Mrozek Bodo , Olšáková Doubravka 
Published: April 2023

Abstract
Hat sich die Zeitgeschichte im Zuge des sensory turn jüngst vermehrt mit Bildern und Klängen befasst, spielen Gerüche bislang eine untergeordnete Rolle. Im Zusammenhang mit Immissionen aus Industrie und Landwirtschaft führten aber gerade üble Gerüche immer wieder zu politischen Konflikten. Anhand des sogenannten Katzendreckgestanks, der in den 1970er Jahren erstmals aktenkundig wurde, lässt sich nachvollziehen, wie Geruchskonflikte grenzüberschreitende Komplikationen verursachen konnten. Mehr als zehn Jahre lang belastete diese Affäre die Beziehungen zwischen der ČSSR, der Bundesrepublik und der DDR. Bodo Mrozek und Doubravka Olšáková analysieren, wie Gerüche technisch vermessen, vor dem Hintergrund des Kalten Kriegs politisiert und schließlich in internationalen Kooperationen im Zeichen der Détente praktisch bekämpft wurden.
An OT Account of Negation in Jordanian Arabic
Authors: Yasin Ayman , Aljarrah Rasheed , Obeidat Hussien , Al-Shawashreh Ekab 
Published: April 2023

Jordanian Arabic exhibits three forms of negation: preverbal, discontinuous and post-verbal. In this paper, we show how these three forms of negation could be accounted for from an OT perspective. Concisely, our main goal is to find out form-specific ranking(s) of the set of universal constraints that condition negation in this dialect. We argue that negation is tense-dependent in this dialect (viz. different tense forms opt for different constraint rankings). We propose a set of universal constraints that constrain the native speaker’s choice of the negation pattern(s) with the verb form. Additionally, we demonstrate how these constraints militate against each other to let only the optimal forms surface with each tense. The paper found that one major difference between negated present and past tense is that NegFirst is ranked very low in present verbs but very high in past verbs. Second, *Neg2 and max 3μ interact to block future circumflex negation forms in future verbs. Third, the morph-syntactic expression of negation was found to be subject to weight in that the negators are maximally tri-moraic, a condition which explains why long ma: cannot be a viable alternative when circumflexing negation either with present or past verbs.