bluuebunny/crossref_metadata_2025_split huggingface dataset:
Numerical study on wrinkling of gradient shell on rigid cylindrical substrate for patterned functional fabric
Authors: Xu Zhao , Shen Hao , Fan Mingyang , Yang Lili , Ge Dengteng 
Published: June 2023

AbstractInspired by wrinkled surfaces such as Earthworms in nature, the construction of wrinkled patterns on fiber surfaces provides a novel idea for high-performance functional fibers and fabrics. Recent theoretical and experimental studies focused on wrinkling patterns on compliant substrates, however, most industrial fibers are rigid. Based on previous experiments of wrinkling on rigid PET fiber from gradient shell, herein the wrinkling formation and evolution based on a novel gradient shell-rigid core (GSRC) system is studied via the nonlinear finite element method (FEM). The results demonstrate that wrinkling is formed due to the stress-induced mutagenesis generated from the gradient shell modulus. The higher gradient factor of shell modulus leads to smaller critical mismatched strain, i.e., easier formation of surface wrinkling. Then a post-buckling phenomenon in this system is studied, involving a successive bifurcation: smooth-wrinkle-ridge transition. Meanwhile, the evolution of topological patterns is significantly influenced by shell-induced curvature. This study not only benefits the understanding of wrinkling gradient shell on rigid cylindrical substrate but also provides useful guides for the fabrication of surface patterned functional fiber or fabrics.
Can multipartite entanglement be characterized by two-point connected correlation functions?
Authors: Lepori Luca , Trombettoni Andrea , Giuliano Domenico , Kombe Johannes , Yago Malo Jorge , Daley Andrew J , Smerzi Augusto , Luisa Chiofalo Maria 
Published: June 2023

Abstract
We discuss under which conditions multipartite entanglement in mixed quantum states can be characterized only in terms of two-point connected correlation functions, as it is the case for pure states. In turn, the latter correlations are defined via a suitable combination of (disconnected) one- and two-point correlation functions. In contrast to the case of pure states, conditions to be satisfied turn out to be rather severe. However, we were able to identify some interesting cases, as when the point-independence is valid of the one-point correlations in each possible decomposition of the density matrix, or when the operators that enter in the correlations are (semi-)positive/negative defined.
The effect of using biodiesel B50 from palm oil on lubricant oil degradation and wear on diesel engine components
Authors: Iswantoro A , Cahyono B , Ruyan C N 
Published: June 2023

Abstract
Alternative fuels in diesel engines are getting attention due to the current world energy crisis. Biodiesel is a fuel where the main composition from palm oil, it is an alternative fuel may can replace fossil diesel fuels. However, the use of biodiesel has several impacts on the engine if its not maintained. The using biodiesel usually results decrease of lubricating oil viscosity and increases the metal wear rate. This research will present results effect of biodiesel B50 on lubricating oil degradation and metal wear on engine components. The method used is an experiment by testing engines for a long time with the Engine Manufacturer Association (EMA) standard. The use of B50 biodiesel causes significant degradation of lubricating oil than Pertamina Dexlite. The lubricating oil test results that with B50 biodiesel decreased viscosity by 16.17%. Lubricating oil also contains the metallic aluminium 8 ppm, 27% metallic iron, and 1 ppm metallic chromium. Using B50 biodiesel also causes journal bearing worse and significant piston ring gap. In addition, the deposit resulting from the using B50 biodiesel was 30.97% greater in the diesel engine component.
Study of Supply Chain Management of Industrial Plan Manufacturing Development of Marine Power Turbine in Indonesia
Authors: Kasharjanto Afian , Erwandi  , Jati Mintarso Cahyadi Sugeng , Suyanto Eko Marta , Rahuna Daif 
Published: June 2023

Abstract
Indonesia had announced its target to reduce carbon emission by achieving 0% Net Zero Emission (NZE) by 2060. So starting in 2022, the Government must update the regulations governing the energy sector to encourage the implementation of renewable energy. As an archipelagic country, one of the renewable energy potentials is Ocean Renewable Energy (ORE). The contribution of the ORE to Indonesia’s National Energy Mix is almost none. Thus, it is a good chance for the government to give more incentives for implementing ORE, especially in eastern Indonesia where they are abundantly available. Since the infrastructure and supporting facilities there, including industries, are sparse and the supply chain management depends on Java Island, it needs special regulations to speed up the implementation of ORE. This paper studies the supply chain management of the implementation of marine current turbines base on secondary data and the experience of engineers from the National Research and Innovation Agency when they implemented the converter technology of the marine current turbine at Larantuka Strait, Nusa Tenggara Timur. Results In this study, the implementation of ocean current turbines must be integrated with government policies related to maritime connectivity and security because the energy produced is large enough and suitable for execution.
Effect of Positioning a Circular Flow Disturbance in Front of the Darrieus Turbine
Authors: Satrio D , Suntoyo  , Albatinusa F , Junianto S , Musabikha S , Madi  , Setyawan F O 
Published: June 2023

Abstract
Darrieus turbine has a vertical-axis configuration that is suitable for current from any direction. Placing a circular flow disturbance in front of the turbine can influence the performance. This study wants to investigate the positioning of the flow disturbance to find the best configuration. The study method used numerical simulation with Computational Fluid Dynamics (CFD) software. There are three variations of the cylinder position in front of the turbine with the angle of 0°, 60°, and -60°. As a result, the configuration can improve or disrupt the performance depending on the position installation. In position 0°, the performance was a decrease of 18%. The best performance is at the flow disturbance position of -60°. The maximum coefficient of power (Cp) value of the turbine was 0.19, with increasing of 27%. Therefore, it is recommended to use the position of -60° in front of the turbine.
Implementation of Metaverse for Modeling The Ship Bridge Simulator Based on Virtual Reality As Educational Purposes, Case Study: Tanjung Priok Port Area
Authors: Siswantoro N , Haryanto D , Hikmahwan M A , Pitana T 
Published: June 2023

Abstract
The development of virtual reality technology has increased in recent years with the characteristics and benefits of virtual reality that can help solve complex problems that exist in the real world. Virtual reality technology has been widely applied as a means of education. The ship bridge simulator is one of the supporting tools for training shipping cadets, but this tool has a relatively high cost. Therefore, this research aims to model the ship bridge simulator. The initial stage in this research is to model the ship bridge simulator belonging to the Surabaya Shipping Polytechnic (Politeknik Pelayaran Surabaya) with a case study of Tanjung Priok Port, referred to as the metaverse area. The process is to convert real objects into 3D assets using Blender software and develop them into a virtual reality application package designed using Unity software. The results obtained at the initial stage of this research are to provide a virtual forward and backward feature of the ship in the metaverse area. This virtual reality application has achieved its goals based on user ratings involving about 30 respondents. It is evidenced by its rating score of 908 out of 1050, which shows that this virtual reality application is included in the excellent category.
Revising the Puzzle of Negligence: Transforming the Citizen towards Civic Maturity
Authors: Rodríguez-Blanco Verónica 
Published: June 2023

Abstract
Corrective justice theorists tell us that to resort to features or characteristics alien to the internal structure of corrective justice and the law of negligence undermines the intelligibility of the phenomena, i.e., the interaction between the plaintiff and the defendant. Like friendship or love which can only be understood by reasons of love or friendship itself, the doctrinal aspects of negligence law can only be correctly understood and become intelligible within the normativity, internal logic and reasons of corrective justice, i.e., equality between persons, autonomy. Furthermore, law and juridical thinking are a matter of rights and duties. By contrast, ethical deliberation and practical reason are a matter of virtuous action, values and what is good. The first underlying presupposition will be called the “internal logic” thesis. The latter will be called the “the separation of rights and values” thesis.
I aim to debunk both theses and argue, first, that we need to grasp the values embedded in the law in our “doing” and in our engagement with the law. This does not mean that these values are external and therefore that we make the internal logic of negligence law unintelligible. I will show that from the forward-looking perspective of the citizen there is no stark separation of rights and values. When engaging in decisions judges attribute liability grounded on the plaintiff’s rights and defendant’s duties, they take the backward-looking standpoint. However, in negligence law, judges advance values that play the role of proleptic thoughts, i.e., descriptions and re-descriptions of values, in the practical reasoning of the citizens. We can understand both functions or roles because we can understand that there is no stark separation of rights/duties and values. Finally, the paper considers whether my position sheds light on the role of moral luck in negligence law.
Presence of microbiome decreases fitness and modifies phenotype in the aquatic plant Lemna minor
Authors: Jewell Mark Davidson , van Moorsel Sofia J , Bell Graham 
Published: June 2023

Abstract
Plants live in close association with microbial organisms that inhabit the environment in which they grow. Much recent work has aimed to characterize these plant–microbiome interactions, identifying those associations that increase growth. Although most work has focused on terrestrial plants, Lemna minor, a floating aquatic angiosperm, is increasingly used as a model in host–microbe interactions and many bacterial associations have been shown to play an important role in supporting plant fitness. However, the ubiquity and stability of these interactions as well as their dependence on specific abiotic environmental conditions remain unclear. Here, we assess the impact of a full L. minor microbiome on plant fitness and phenotype by assaying plants from eight natural sites, with and without their microbiomes, over a range of abiotic environmental conditions. We find that the microbiome systematically suppressed plant fitness, although the magnitude of this effect varied among plant genotypes and depended on the abiotic environment. Presence of the microbiome also resulted in phenotypic changes, with plants forming smaller colonies and producing smaller fronds and shorter roots. Differences in phenotype among plant genotypes were reduced when the microbiome was removed, as were genotype by environment interactions, suggesting that the microbiome plays a role in mediating the plant phenotypic response to the environment.
New methods for sorghum transformation in temperate climates
Authors: Miller Sara , Rønager Asta , Holm Rose , Fontanet-Manzaneque Juan B , Caño-Delgado Ana I , Bjarnholt Nanna 
Published: June 2023

Abstract
Sorghum (Sorghum bicolor) is an emerging cereal crop in temperate climates due to its high drought tolerance and other valuable traits. Genetic transformation is an important tool for the improvement of cereals. However, sorghum is recalcitrant to genetic transformation which is almost only successful in warmer climates. Here, we test the application of two new techniques for sorghum transformation in temperate climates, namely transient transformation by Agrobacterium tumefaciens–mediated agroinfiltration and stable transformation using gold particle bombardment and leaf whorls as explants. We optimized the transient transformation method, including post-infiltration incubation of plants in the dark and using Agrobacterium grown on plates with a high cell density (OD600 = 2.0). Expression of the green fluorescence protein (GFP)-tagged endogenous sorghum gene SbDHR2 was achieved with low transformation efficiency, and our results point out a potential weakness in using this approach for localization studies. Furthermore, we succeeded in the production of callus and somatic embryos from leaf whorls, although no genetic transformation was accomplished with this method. Both methods show potential, even if they seem to be influenced by climatic conditions and therefore need further optimization to be applied routinely in temperate climates.
Observation, Interaction, Communication: The Role of the Second Person
Authors: Zahavi Dan 
Published: June 2023

Abstract
Recent years have seen an upsurge of interest in the second-person perspective, not only in philosophy of mind, language, law and ethics, but also in various empirical disciplines such as cognitive neuroscience and developmental psychology. A distinctive and perhaps also slightly puzzling feature of this ongoing discussion is that whereas many contributors insist that a proper consideration of the second-person perspective will have an impact on our understanding of social cognition, joint action, communication, self-consciousness, morality, and so on, there remains considerable disagreement about what exactly a second-person perspective amounts to (see Eilan 2014; Conant and Rödl 2014). What is the difference between adopting a second-person and a third-person perspective on another? How does one relate to another as a you and how does that differ from relating to another as a he, she or they? In the following, I will consider three different proposals and argue that a promising but somewhat overlooked account can be found in the work of Husserl.
Normative Isolation: The Dynamics of Power and Authority in Gaslighting
Authors: Bagnoli Carla 
Published: June 2023

AbstractGaslighting is a form of domination which builds upon multiple and mutually reinforcing strategies that induce rational acquiescence. Such abusive strategies progressively insulate the victims and inflict a loss in self-respect, with powerful alienating effects. In arguing for these claims, I reject the views that gaslighting is an epistemic or structural wrong, or a moral wrong of instrumentalization. In contrast, I refocus on personal addresses that use, affect, and distort the very practice of rational justification. Further, I argue that the social dimension of gaslighting cannot be fully explained by reference to bare social structures because this compound wrong succeeds via emotional person-to-person addresses. Rational justification becomes, then, the locus where the struggle for power takes place. This struggle involves and is operated by not only victims and wrongdoers but also third parties. They are crucial actors in wrongdoing as well as in rescuing the victims and restoring their normative status. Ultimately, this study shows that the deontic structure of wrong is multifocal, and its relationality points to modes of epistemic and moral rehabilitation that are also modes of social empowerment.
Aesthetic Appreciation without Inversion
Authors: Friend Stacie 
Published: June 2023

Abstract
C. Thi Nguyen claims that although we can make aesthetic judgements based on testimony or inference, we resist doing so owing to a contingent norm of our social practice. For Nguyen, aesthetic engagement involves a ‘motivational inversion’ similar to games in which we adopt inefficient means of winning so that we can enjoy the process of playing. Similarly, he says, adopting the norm enables us to engage in the autonomous activity of appreciation. I argue that Nguyen is right that the purpose of our practice is appreciation, but wrong to think any motivational inversion is required in pursuing it.
TRAmHap: accurate prediction of transcriptional activity from DNA methylation haplotypes in bisulfite-sequencing data
Authors: Gao Siqi , Zhu Hanwen , Cai Kangwen , Liu Leiqin , Zhang Zhiqiang , Ding Yi , Xu Yaochen , Zheng Xiaoqi , Shi Jiantao 
Published: June 2023

Abstract
Deoxyribonucleic acid (DNA) methylation (DNAm) is an important epigenetic mechanism that plays a role in chromatin structure and transcriptional regulation. Elucidating the relationship between DNAm and gene expression is of great importance for understanding its role in transcriptional regulation. The conventional approach is to construct machine-learning-based methods to predict gene expression based on mean methylation signals in promoter regions. However, this type of strategy only explains about 25% of gene expression variation, and hence is inadequate in elucidating the relationship between DNAm and transcriptional activity. In addition, using mean methylation as input features neglects the heterogeneity of cell populations that can be reflected by DNAm haplotypes. We here developed TRAmaHap, a novel deep-learning framework that predicts gene expression by utilizing the characteristics of DNAm haplotypes in proximal promoters and distal enhancers. Using benchmark data of human and mouse normal tissues, TRAmHap shows much higher accuracy than existing machine-learning based methods, by explaining 60~80% of gene expression variation across tissue types and disease conditions. Our model demonstrated that gene expression can be accurately predicted by DNAm patterns in promoters and long-range enhancers as far as 25 kb away from transcription start site, especially in the presence of intra-gene chromatin interactions.
Rigorous benchmarking of T-cell receptor repertoire profiling methods for cancer RNA sequencing
Authors: Peng Kerui , Nowicki Theodore S , Campbell Katie , Vahed Mohammad , Peng Dandan , Meng Yiting , Nagareddy Anish , Huang Yu-Ning , Karlsberg Aaron , Miller Zachary , Brito Jaqueline , Nadel Brian , Pak Victoria M , Abedalthagafi Malak S , Burkhardt Amanda M , Alachkar Houda , Ribas Antoni , Mangul Serghei 
Published: June 2023

Abstract
The ability to identify and track T-cell receptor (TCR) sequences from patient samples is becoming central to the field of cancer research and immunotherapy. Tracking genetically engineered T cells expressing TCRs that target specific tumor antigens is important to determine the persistence of these cells and quantify tumor responses. The available high-throughput method to profile TCR repertoires is generally referred to as TCR sequencing (TCR-Seq). However, the available TCR-Seq data are limited compared with RNA sequencing (RNA-Seq). In this paper, we have benchmarked the ability of RNA-Seq-based methods to profile TCR repertoires by examining 19 bulk RNA-Seq samples across 4 cancer cohorts including both T-cell-rich and T-cell-poor tissue types. We have performed a comprehensive evaluation of the existing RNA-Seq-based repertoire profiling methods using targeted TCR-Seq as the gold standard. We also highlighted scenarios under which the RNA-Seq approach is suitable and can provide comparable accuracy to the TCR-Seq approach. Our results show that RNA-Seq-based methods are able to effectively capture the clonotypes and estimate the diversity of TCR repertoires, as well as provide relative frequencies of clonotypes in T-cell-rich tissues and low-diversity repertoires. However, RNA-Seq-based TCR profiling methods have limited power in T-cell-poor tissues, especially in highly diverse repertoires of T-cell-poor tissues. The results of our benchmarking provide an additional appealing argument to incorporate RNA-Seq into the immune repertoire screening of cancer patients as it offers broader knowledge into the transcriptomic changes that exceed the limited information provided by TCR-Seq.
Differences in male calling song and female mate location behaviour between urban and rural crickets
Authors: Kuriwada Takashi 
Published: June 2023

Abstract
Traffic noise is one of the selection pressures of urban habitats. Because noise interferes with acoustic communication, many studies have shown that the temporal structures of acoustic signals change depending on the noise. However, it is often unknown whether the changes are adaptive, such as changes being more easily located by females under noisy conditions. To investigate the phenomena, bend-legged ground crickets (Dianemobius nigrofasciatus) were collected from three urban and three rural habitats and reared in a common garden conditions. Male calling songs and female mate location behaviour of the progeny were measured. Urban males emitted a calling song with a higher dominant frequency and shorter chirp than did rural males. The playback experiment of female response and localization to songs of urban and rural males, controlling for noise, showed that there were no significant effects of the song on the mate location behaviour between urban and rural songs under noisy conditions. Although the song of urban males elicited a faster response of females, the effect was limited. These results indicate the change in song is not adaptive in terms of female choice. Urban females located more quickly to song under noisy conditions. The results suggest adaptive changes in female mating behaviour occur in urban habitats.
Sexual dimorphism in ichneumonine parasitic wasps (Hymenoptera: Ichneumonidae: Ichneumoninae) and the neglected influence of the ecological niche
Authors: Mathou Adrien , Wahl David B , Quentel Uriell , Claridge Brandon , Santos Bernardo F 
Published: June 2023

AbstractSexual dimorphism is a ubiquitous phenomenon, but its ecological role and evolutionary significance are still poorly understood in many hyperdiverse lineages. We used geometric morphometrics to characterize and quantify sexual dimorphism in the head and mesosoma of 24 species in the wasp subfamily Ichneumoninae (Hymenoptera: Ichneumonidae). Our results show that sexual dimorphism varies substantially among species but is generally more pronounced on the head, with males occupying a noticeably smaller region of the morphospace than females. Phenotypic trajectory analyses showed a trend towards conserved trajectories in the difference between males and females, indicating that dimorphism seems to manifest as predictable shape changes across species. Species parasitizing pupae, particularly in concealed substrates, were found to have higher sexual dimorphism for the head than species parasitizing more exposed hosts such as larvae. For the mesosoma, this difference was not significant, with the degree of sexual dimorphism more influenced by phylogenetic history. We hypothesize that female head shape has adapted to the demands related to finding hosts in concealed habitats, whereas species that attack exposed or weakly concealed hosts have kept a generalized head shape in both sexes. These results highlight the importance of investigating intersex ecological differences as drivers of sexual dimorphism.