bluuebunny/crossref_metadata_2025_split huggingface dataset:
Time-varying model of engagement with digital self reporting: Evidence from smoking cessation longitudinal studies
Authors: Sobolev Michael , Anand Aditi , Dziak John J. , Potter Lindsey N. , Lam Cho Y. , Wetter David W. , Nahum-Shani Inbal 
Published: April 2023

ObjectiveInsufficient engagement is a critical barrier impacting the utility of digital interventions and mobile health assessments. As a result, engagement itself is increasingly becoming a target of studies and interventions. The purpose of this study is to investigate the dynamics of engagement in mobile health data collection by exploring whether, how, and why response to digital self-report prompts change over time in smoking cessation studies.MethodData from two ecological momentary assessment (EMA) studies of smoking cessation among diverse smokers attempting to quit (N = 573) with a total of 65,974 digital self-report prompts. We operationalize engagement with self-reporting in term of prompts delivered and prompt response to capture both broad and more granular engagement in self-reporting, respectively. The data were analyzed to describe trends in prompt delivered and prompt response over time. Time-varying effect modeling (TVEM) was employed to investigate the time-varying effects of response to previous prompt and the average response rate on the likelihood of current prompt response.ResultsAlthough prompt response rates were relatively stable over days in both studies, the proportion of participants with prompts delivered declined steadily over time in one of the studies, indicating that over time, fewer participants charged the device and kept it turned on (necessary to receive at least one prompt per day). Among those who did receive prompts, response rates were relatively stable. In both studies, there is a significant, positive and stable relationship between response to previous prompt and the likelihood of response to current prompt throughout all days of the study. The relationship between the average response rate prior to current prompt and the likelihood of responding to the current prompt was also positive, and increasing with time.ConclusionOur study highlights the importance of integrating various indicators to measure engagement in digital self-reporting. Both average response rate and response to previous prompt were highly predictive of response to the next prompt across days in the study. Dynamic patterns of engagement in digital self-reporting can inform the design of new strategies to promote and optimize engagement in digital interventions and mobile health studies.
Biochar amendment of a metal contaminated soil partially immobilized Zn, Pb, and Cd and reduced ryegrass uptake
Authors: Antonangelo Joao Arthur , Zhang Hailin , Sitienei Isaac 
Published: April 2023

Soil heavy metals (HM) contamination threatens soil and water quality, which significantly affects humans and animals. This study focuses on the competitive immobilization of zinc (Zn), lead (Pb), and cadmium (Cd) in soils from a contaminated site using ryegrass (Lolium perenne) in a potting experiment amended with biochars. Increased rates of switchgrass- (SGB) and poultry litter-derived biochars (PLB) were applied before ryegrass cultivation. Soil HM phytoavailability and HM concentrations in plant shoots were determined. Multivariate regression models were used to evaluate the influence of several soil chemical attributes on the HM phytoavailability. The increased rates of both biochars reduced the Zn, Pb, and Cd availability (p &lt; 0.001). Langmuir models showed that the maximum HM immobilization (IMAX) was 169.2 ± 29.5 mg kg–1 for Zn with SGB, and 20 ± 7.4 (Pb) and 1.08 mg kg–1 (Cd) with PLB. The extended Langmuir model (EL) showed competitive HM immobilization since there was a decrease in the IMAX of Zn (∼90 ± 28 mg kg–1 from SGB) and Cd (∼0.70 ± 0.21 mg kg–1). Negative values of Pb and Cd immobilization at low rates of SGB indicated an increase in those HM availabilities and preferential immobilization for Zn. The reduced Zn and Pb uptake in ryegrass shoots ranged from 70% to 98% and were optimum at rates of 0.50% ± 0.00%–0.60% ± 0.06% for both biochars, and 1.6% ± 0.4% of SGB for Cd. The stepwise multiple linear regression (SMLR) and partial least squares (PLS) revealed that pH and organic matter (OM) were the most responsible factors for reducing Zn bioavailability while OM was more impactful in decreasing Pb and Cd levels. This suggests that the preferential immobilization for Zn relies on its higher sensitivity to the pH increase. Also, the ubiquitous positive relationship among the metals studied shows that competitive immobilization is ceased at high rates of biochars application. Path analysis (PA) showed that pH and OM were the common contributors from both biochars to simultaneously affect Zn, Pb, and Cd availability regardless of the contrasting physicochemical properties of the two bioproducts. This work proved the potential of applying low rates of two contrasting feedstock-derived biochars to remediate the contaminants and safely grow ryegrass.
New pathogenic variant in DLX5: New clues for a clinical spectrum from split-hand-foot malformation to fibular aplasia, tibial campomelia and oligosyndactyly
Authors: Sifre-Ruiz Anna , Sagasta Amaia , Santos Erika , Perez de Nanclares Guiomar , Heath Karen E. 
Published: April 2023

Introduction: FATCO (Fibular Aplasia, Tibial Campomelia and Oligosyndactyly) is a very infrequent skeletal dysplasia classified within the limb hypoplasia-reduction defects group whose genetic cause has not yet been identified. The advent of next-generation sequencing is enabling the diagnosis of diseases with no previously known genetic cause.Methods: We performed a thorough autopsy on a fetus whose pregnancy was legally terminated due to severe malformations detected by ultrasound. A trio exome was run to identify the genetic cause and risk of recurrence. Previous literature of similar cases was systematically searched.Results: Anatomopathological analyses revealed complete fibular aplasia, shortened and campomelic tibia, absent ankle joint, club right foot and a split foot malformation, leading to the diagnosis of FATCO. Exome sequencing showed that the female fetus carried a de novo nonsense variant in DLX5. The literature search permitted the collection of information on 43 patients with FATCO, the majority of whom were males diagnosed postnatally. In most cases, lower limbs were affected exclusively, but in 39.5% of cases the upper limbs were also affected.Conclusion: The pathologies associated with DLX5 variants encompass a wide spectrum of manifestations ranging from abnormalities exclusively in the hands and feet to long bones such as the tibia and fibula.
Mast Cell Activation Triggered by Retrovirus Promotes Acute Viral Infection
Authors: Song Shu-Ting , Wu Meng-Li , Zhang Hai-Jiao , Su Xiao , Wang Jian-Hua 
Published: April 2023

Graphical AbstractRetrovirus-induced MC degranulation promotes acute viral infection. The acute infection of MuLV/Friend virus triggers MC degranulation, which activates G-MDSCs to inhibit both CD8+ T- and NK cell-mediated antiviral immune responses; the HR1 antagonists Eastine and Loratadine that being used as the MC stabilizers block MC degranulation and consequently reverse degranulation-induced immune suppression for viral suppression. G-MDSCs, granulocyte-like myeloid derived suppressive cells; HR1, histamine receptor 1; iNOS, inducible nitric oxide synthase; MC, mast cell.
Salinity matters the most: How environmental factors shape the diversity and structure of cyanobacterial mat communities in high altitude arid ecosystems
Authors: Sandzewicz Małgorzata , Khomutovska Nataliia , Łach Łukasz , Kwiatowski Jan , Niyatbekov Toirbek , Suska-Malawska Małgorzata , Jasser Iwona 
Published: April 2023

IntroductionMicrobial mats are complex communities of benthic microorganisms that occur at the soil-water interphase in lakes’ shores, streams, and ponds. In the cold, mountainous desert of Eastern Pamir (Tajikistan), where scarce water bodies are influenced by extreme environmental conditions, photosynthetic cyanobacteria form diverse mats. The mats are characterized by different morphology and thickness. Their habitats exhibit a wide range of conditions; from oligosaline to hypersaline, oligotrophic to hypertrophic, and from cold ponds to hot springs. The aim of the present study was to reveal the taxonomic composition and structure of these mats and to examine which environmental factors influence them.MethodsFifty-one mats were collected from small water bodies around Bulunkul, Karakul, and Rangkul Lakes in 2015 and 2017. The physical and chemical properties of the water were measured in situ, while the concentration of nutrients was analyzed ex-situ. To reveal the taxonomic composition of the mats, the hypervariable V3-V4 region of the 16S rRNA gene was examined using NGS technology.ResultsThe results of bioinformatic analyses were compared with microscopic observations. They showed that Cyanobacteria was the dominant phylum, constituting on average 35% of bacterial ASVs, followed by Proteobacteria (28%), Bacteroidota (11%), and Firmicutes (9%). Synechococcales, Oscillatoriales, and Nostocales orders prevailed in Oxyphotobacteria, with a low contribution of Chroococcales, Gloeobacterales, and Chroococcidiopsidales. Occasionally the non-photosynthetic Vampirivibrionia (Melainabacteria) and Sericytochromatia from sister clades to Oxyphotobacteria were noted in the samples. Moreover, there was a high percentage of unidentified cyanobacterial sequences, as well as the recently described Hillbrichtia pamiria gen. et sp. nov., present in one of the samples. Salinity, followed by Na and K concentrations, correlated positively with the composition and structure of Oxyphotobacteria on different taxonomic levels and the abundance of all bacterial ASVs.DiscussionThe study suggests that the investigated communities possibly host more novel and endemic species. Among the environmental factors, salinity influenced the Oxyphotobacteria communities the most. Overall, the microenvironmental factors, i.e. the conditions in each of the reservoirs seemed to have a larger impact on the diversity of microbial mats in Pamir than the “subregional” factors, related to altitude, mean annual air temperature and distance between these subregions.
Imaging-based frequency mapping for cochlear implants – Evaluated using a daily randomized controlled trial
Authors: Lambriks Lars , van Hoof Marc , Debruyne Joke , Janssen Miranda , Chalupper Josef , van der Heijden Kiki , Hof Janny , Hellingman Katja , Devocht Elke , George Erwin 
Published: April 2023

BackgroundDue to variation in electrode design, insertion depth and cochlear morphology, patients with a cochlear implant (CI) often have to adapt to a substantial mismatch between the characteristic response frequencies of cochlear neurons and the stimulus frequencies assigned to electrode contacts. We introduce an imaging-based fitting intervention, which aimed to reduce frequency-to-place mismatch by aligning frequency mapping with the tonotopic position of electrodes. Results were evaluated in a novel trial set-up where subjects crossed over between intervention and control using a daily within-patient randomized approach, immediately from the start of CI rehabilitation.MethodsFourteen adult participants were included in this single-blinded, daily randomized clinical trial. Based on a fusion of pre-operative imaging and a post-operative cone beam CT scan (CBCT), mapping of electrical input was aligned to natural place-pitch arrangement in the individual cochlea. That is, adjustments to the CI’s frequency allocation table were made so electrical stimulation of frequencies matched as closely as possible with corresponding acoustic locations in the cochlea. For a period of three months, starting at first fit, a scheme was implemented whereby the blinded subject crossed over between the experimental and standard fitting program using a daily randomized wearing schedule, and thus effectively acted as their own control. Speech outcomes (such as speech intelligibility in quiet and noise, sound quality and listening effort) were measured with both settings throughout the study period.ResultsOn a group level, standard fitting obtained subject preference and showed superior results in all outcome measures. In contrast, two out of fourteen subjects preferred the imaging-based fitting and correspondingly had better speech understanding with this setting compared to standard fitting.ConclusionOn average, cochlear implant fitting based on individual tonotopy did not elicit higher speech intelligibility but variability in individual results strengthen the potential for individualized frequency fitting. The novel trial design proved to be a suitable method for evaluation of experimental interventions in a prospective trial setup with cochlear implants.
The first prospective application of AIGS real-time fluorescence PCR in precise diagnosis and treatment of meningioma: Case report
Authors: Han Zhe , Chi Huizhong , Li Xueen , Jia Deze , Li Haiyan , Ni Shilei , Zhang Kailiang , Feng Zichao , Wang Qingtong , Xue Hao , Li Gang 
Published: April 2023

BackgroundThe emergence of the new WHO classification standard in 2021 incorporated molecular characteristics into the diagnosis system for meningiomas, making the diagnosis and treatment of meningiomas enter the molecular era.Recent findingsAt present, there are still some problems in the clinical molecular detection of meningioma, such as low attention, excessive detection, and a long cycle. In order to solve these clinical problems, we realized the intraoperative molecular diagnosis of meningioma by combining real-time fluorescence PCR and AIGS, which is also the first known product applied to the intraoperative molecular diagnosis of meningioma.Implications for practiceWe applied AIGS to detect and track a patient with TERTp mutant meningioma, summarized the process of intraoperative molecular diagnosis, and expounded the significance of intraoperative molecular diagnosis under the new classification standard, hoping to optimize the clinical decision-making of meningioma through the diagnosis and treatment plan of this case.
The neurosurgical benefit of contactless in vivo optical coherence tomography regarding residual tumor detection: A clinical study
Authors: Kuppler Patrick , Strenge Paul , Lange Birgit , Spahr-Hess Sonja , Draxinger Wolfgang , Hagel Christian , Theisen-Kunde Dirk , Brinkmann Ralf , Huber Robert , Tronnier Volker , Bonsanto Matteo Mario 
Published: April 2023

PurposeIn brain tumor surgery, it is crucial to achieve complete tumor resection while conserving adjacent noncancerous brain tissue. Several groups have demonstrated that optical coherence tomography (OCT) has the potential of identifying tumorous brain tissue. However, there is little evidence on human in vivo application of this technology, especially regarding applicability and accuracy of residual tumor detection (RTD). In this study, we execute a systematic analysis of a microscope integrated OCT-system for this purpose.Experimental designMultiple 3-dimensional in vivo OCT-scans were taken at protocol-defined sites at the resection edge in 21 brain tumor patients. The system was evaluated for its intraoperative applicability. Tissue biopsies were obtained at these locations, labeled by a neuropathologist and used as ground truth for further analysis. OCT-scans were visually assessed with a qualitative classifier, optical OCT-properties were obtained and two artificial intelligence (AI)-assisted methods were used for automated scan classification. All approaches were investigated for accuracy of RTD and compared to common techniques.ResultsVisual OCT-scan classification correlated well with histopathological findings. Classification with measured OCT image-properties achieved a balanced accuracy of 85%. A neuronal network approach for scan feature recognition achieved 82% and an auto-encoder approach 85% balanced accuracy. Overall applicability showed need for improvement.ConclusionContactless in vivo OCT scanning has shown to achieve high values of accuracy for RTD, supporting what has well been described for ex vivo OCT brain tumor scanning, complementing current intraoperative techniques and even exceeding them in accuracy, while not yet in applicability.
Surface engineered mesoporous silica carriers for the controlled delivery of anticancer drug 5-fluorouracil: Computational approach for the drug-carrier interactions using density functional theory
Authors: Rehman Fozia , Khan Asif Jamal , Sama Zaib Us , Alobaid Hussah M. , Gilani Mazhar Amjad , Safi Sher Zaman , Muhammad Nawshad , Rahim Abdur , Ali Abid , Guo Jiahua , Arshad Muhammad , Emran Talha Bin 
Published: April 2023

Introduction: Drug delivery systems are the topmost priority to increase drug safety and efficacy. In this study, hybrid porous silicates SBA-15 and its derivatives SBA@N and SBA@3N were synthesized and loaded with an anticancer drug, 5-fluorouracil. The drug release was studied in a simulated physiological environment.Method: These materials were characterized for their textural and physio-chemical properties by scanning electron microscopy (SEM), nuclear magnetic resonance (NMR), Fourier transform infrared spectroscopy (FTIR), small-angle X-ray diffraction (SAX), and nitrogen adsorption/desorption techniques. The surface electrostatics of the materials was measured by zeta potential.Results: The drug loading efficiency of the prepared hybrid materials was about 10%. In vitro drug release profiles were obtained in simulated fluids. Slow drug release kinetics was observed for SBA@3N, which released 7.5% of the entrapped drug in simulated intestinal fluid (SIF, pH 7.2) and 33% in simulated body fluid (SBF, pH 7.2) for 72 h. The material SBA@N presented an initial burst release of 13% in simulated intestinal fluid and 32.6% in simulated gastric fluid (SGF, pH 1.2), while about 70% of the drug was released within the next 72 h. Density functional theory (DFT) calculations have also supported the slow drug release from the SBA@3N material. The release mechanism of the drug from the prepared carriers was studied by first-order, second-order, Korsmeyer–Peppas, Hixson–Crowell, and Higuchi kinetic models. The drug release from these carriers follows Fickian diffusion and zero-order kinetics in SGF and SBF, whereas first-order, non-Fickian diffusion, and case-II transport were observed in SIF.Discussion: Based on these findings, the proposed synthesized hybrid materials may be suggested as a potential drug delivery system for anti-cancer drugs such as 5-fluorouracil.
Self-stigma and cognitive insight in individuals at ultra-high risk for psychosis
Authors: Sportel Bouwina Esther , van Enthoven Mirjam , van Donkersgoed Rozanne J. M. , Kuis Daan Jan , van de Giessen Tara , Lysaker Paul H. , Hasson-Ohayon Ilanit , de Jong Steven , Boonstra Nynke , Pijnenborg Gerdina H. M. 
Published: April 2023

BackgroundImpaired cognitive insight and increased self-stigma have been consistently reported in individuals diagnosed with schizophrenia spectrum disorders, but little is known about its presence in individuals at ultra-high risk of developing a psychosis, although self-stigma is associated with transition.to psychosis. The current study examined whether self-stigma is already present in individuals at ultra-high risk of psychosis, and whether this is associated with impaired cognitive insight.Methods184 participants were recruited divided over three groups, namely individuals diagnosed with a schizophrenia spectrum disorder (SSD; n = 92, 34% females), individuals at ultra-high risk for psychosis (UHR; n = 43, 59% females) and general population controls (GPC; n = 49, 27% females). All participants completed assessments on demographic information (gender, age, education), and cognitive insight. In addition, participants with SSD and individuals at UHR completed a questionnaire on self-stigma.ResultsThe level of self-stigma did not differ between individuals at UHR and individuals diagnosed with SSD. Cognitive insight also did not differ significantly between the three groups, but the subscale self-reflection differed between the three groups [F(2,184) = 4.20, p = 0.02], with the UHR and SSD groups showing more self-reflection. Pearson’s correlation analyses showed that in individuals at UHR total cognitive insight and its self-reflection subscale were significantly associated with the alienation subscale of self-stigma, and in individuals with SSD self-certainty subscale of cognitive insight was significantly associated with stereotype endorsement.ConclusionFindings show that self-stigma was already present in the UHR phase, to a similar degree as in individuals with a diagnosis of a SSD, and is thus not dependent of previous experience of having a label of SSD. Cognitive insight in individuals at UHR of psychosis appears to be intact, but individuals at UHR showed more self-reflectiveness, and individuals at risk with high cognitive insight also experience high levels of self-stigma. Overall findings from our study suggest that pre-emptive interventions targeting self-stigma, while considering cognitive insight, are needed early on in manifestation of psychotic illness, preferably already in the UHR phase.
Incarceration status at buprenorphine initiation and OUD treatment outcomes during pregnancy
Authors: Nguyen Andrea , Shadowen Hannah , Shadowen Caroline , Thakkar Bhushan , Knittel Andrea K. , Martin Caitlin E. 
Published: April 2023

IntroductionOpioid use disorder (OUD) is a leading cause of pregnancy-associated deaths. OUD treatment with buprenorphine (BUP) reduces overdose risk and improves perinatal outcomes. Incarceration can be a barrier to receipt of OUD treatment during pregnancy and postpartum. The objective of this study was to examine differences in BUP continuation at delivery by patients’ incarceration status at the time of BUP initiation.MethodsThis is a secondary analysis of a retrospective cohort study of pregnant patients with OUD who delivered at an academic medical center and initiated BUP between January 1, 2018, and March 30, 2020. The primary outcome was BUP continuation at delivery, abstracted from the state prescription monitoring program and electronic medical record, along with incarceration status. Bivariate analysis was used to assess the relationship between BUP continuation and incarceration status.ResultsOur sample included 76 patients, with 62% of patients incarcerated at BUP initiation (n = 47). Among the entire sample, 90.7% (n = 68) received BUP at delivery. Among patients who were incarcerated at BUP initiation, 97% remained on BUP at delivery; among patients who were not incarcerated at BUP initiation, 79% remained on BUP at delivery (p = 0.02).ConclusionIn our sample from a health system housing a care model for pregnant and parenting people with OUD with local jail outreach, BUP continuation rates at delivery were high, both for patients who were and were not incarcerated at BUP initiation. Findings are intended to inform future work to develop and evaluate evidence-based, patient-centered interventions to expand OUD treatment access for incarcerated communities.