A hybrid model‐ and deep learning‐based framework for functional lung image synthesis from multi‐inflation CT and hyperpolarized gas MRI
Authors: Astley Joshua R. , Biancardi Alberto M , Marshall Helen , Hughes Paul J. C. , Collier Guilhem J. , Hatton Matthew Q. , Wild Jim M. , Tahir Bilal A. 
Published: March 2023

AbstractBackgroundHyperpolarized gas MRI is a functional lung imaging modality capable of visualizing regional lung ventilation with exceptional detail within a single breath. However, this modality requires specialized equipment and exogenous contrast, which limits widespread clinical adoption. CT ventilation imaging employs various metrics to model regional ventilation from non‐contrast CT scans acquired at multiple inflation levels and has demonstrated moderate spatial correlation with hyperpolarized gas MRI. Recently, deep learning (DL)‐based methods, utilizing convolutional neural networks (CNNs), have been leveraged for image synthesis applications. Hybrid approaches integrating computational modeling and data‐driven methods have been utilized in cases where datasets are limited with the added benefit of maintaining physiological plausibility.PurposeTo develop and evaluate a multi‐channel DL‐based method that combines modeling and data‐driven approaches to synthesize hyperpolarized gas MRI lung ventilation scans from multi‐inflation, non‐contrast CT and quantitatively compare these synthetic ventilation scans to conventional CT ventilation modeling.MethodsIn this study, we propose a hybrid DL configuration that integrates model‐ and data‐driven methods to synthesize hyperpolarized gas MRI lung ventilation scans from a combination of non‐contrast, multi‐inflation CT and CT ventilation modeling. We used a diverse dataset comprising paired inspiratory and expiratory CT and helium‐3 hyperpolarized gas MRI for 47 participants with a range of pulmonary pathologies. We performed six‐fold cross‐validation on the dataset and evaluated the spatial correlation between the synthetic ventilation and real hyperpolarized gas MRI scans; the proposed hybrid framework was compared to conventional CT ventilation modeling and other non‐hybrid DL configurations. Synthetic ventilation scans were evaluated using voxel‐wise evaluation metrics such as Spearman's correlation and mean square error (MSE), in addition to clinical biomarkers of lung function such as the ventilated lung percentage (VLP). Furthermore, regional localization of ventilated and defect lung regions was assessed via the Dice similarity coefficient (DSC).ResultsWe showed that the proposed hybrid framework is capable of accurately replicating ventilation defects seen in the real hyperpolarized gas MRI scans, achieving a voxel‐wise Spearman's correlation of 0.57 ± 0.17 and an MSE of 0.017 ± 0.01. The hybrid framework significantly outperformed CT ventilation modeling alone and all other DL configurations using Spearman's correlation. The proposed framework was capable of generating clinically relevant metrics such as the VLP without manual intervention, resulting in a Bland‐Altman bias of 3.04%, significantly outperforming CT ventilation modeling. Relative to CT ventilation modeling, the hybrid framework yielded significantly more accurate delineations of ventilated and defect lung regions, achieving a DSC of 0.95 and 0.48 for ventilated and defect regions, respectively.ConclusionThe ability to generate realistic synthetic ventilation scans from CT has implications for several clinical applications, including functional lung avoidance radiotherapy and treatment response mapping. CT is an integral part of almost every clinical lung imaging workflow and hence is readily available for most patients; therefore, synthetic ventilation from non‐contrast CT can provide patients with wider access to ventilation imaging worldwide.