bluuebunny/crossref_metadata_2025_split huggingface dataset:
How to include and recognize the work of ornithologists based in the Neotropics: Fourteen actions forOrnithological Applications,Ornithology, and other global-scope journals
Authors: Ruelas Inzunza Ernesto , Cockle Kristina L , Núñez Montellano María Gabriela , Fontana Carla S , Cuatianquiz Lima Cecilia , Echeverry-Galvis María A , Fernández-Gómez Ronald A , Montaño-Centellas Flavia A , Bonaccorso Elisa , Lambertucci Sergio A , Cornelius Cintia , Bosque Carlos , Bugoni Leandro , Salinas-Melgoza Alejandro , Renton Katherine , Freile Juan F , Angulo Fernando , Mugica Valdés Lourdes , Velarde Enriqueta , Cuadros Sandra , Miño Carolina Isabel 
Published: February 2023

AbstractGlobal-scope scientific journals have played an important role in upholding a colonial legacy of north-south inequities in ornithology, and they now have a key role to play in increasing equity in scientific publishing. We explore common barriers faced by ornithologists in the Neotropics (Latin America and the Caribbean) and suggest priority actions that Ornithological Applications, Ornithology, and other global-scope ornithological journals can take to increase equity in publication and research uptake. Among the most important problems, we identified (1) restrictive (and north-biased) criteria for assessing research “importance” and “novelty,” (2) the high publication costs of the Author Pay (Gold) Open Access model, (3) language hegemony, (4) under-representation of ornithologists from the Neotropics on editorial boards and as lead authors on invited articles, and (5) lack of attention to ethics of collaboration and citation. We recommend that Ornithological Applications, Ornithology, and other global-scope ornithological journals (1) adjust their criteria for publication with the aim to publish all scientifically robust and ethically rigorous ornithology research submitted by first authors based in the Neotropics, including negative results and articles on basic biology; (2) maintain or create options for free or low-cost publication; (3) offer the option of a submission and review process in Spanish (and possibly other languages in the future); (4) increase the representation of ornithologists based in the Neotropics (especially women and those belonging to other marginalized groups) in core editorial teams and on editorial boards; and (5) introduce structured reflexivity statements, in which authors declare how local scientists were involved in the research and how equity was promoted in the collaboration that resulted in the manuscript. For these changes to be broadly effective in the long term, ornithologists across the Global South, and Indigenous, Brown, and Black ornithologists globally, should play lead roles in designing, implementing, and assessing the effectiveness of journal policies and programs. Spanish and Portuguese translations are available in the supplementary material.
Trading in the era of carbon standards: how can trade, standard setting, and climate regimes cooperate?
Authors: Lim Aik Hoe , Holzer Kateryna 
Published: February 2023

Abstract
Regulatory cooperation is indispensable for increasing the quality of carbon-related product regulations and standards (CPRS), reducing trade tensions over them, facilitating their alignment, and, eventually, promoting the convergence of different national emission reduction levels towards a universal carbon price. In this article, we explore how trade and trade-related arrangements and institutions can be used to intensify regulatory cooperation on CPRS. We focus on the following questions: when, where, and how does regulatory cooperation on CPRS take place within the international trading system, and what are the ways to strengthen regulatory cooperation on CPRS? While admitting the key role of market forces and the large market factor in the alignment of carbon standards, we argue that this de facto trade-driven alignment requires a steering from state-to-state regulatory cooperation, as well as cooperation of government agencies with private certification schemes in helping producers, especially from developing countries, to comply. Moreover, the potential for more systematic collaboration between the multilateral institutions for climate change and trade should be explored. This could include the establishment of a joint UNFCCC–WTO forum for the exchange of policy-relevant technical and scientific information on key issues surrounding CPRS and consolidation of the relevant database.
From theory to practice: determining emissions in traded goods under a border carbon adjustment
Authors: Mehling Michael A , Ritz Robert A 
Published: February 2023

Abstract
As part of its Green Deal, the European Union has advanced a ‘Carbon Border Adjustment Mechanism’ (CBAM). Reflective of a trend towards greater use of coercive trade measures to advance environmental and other policy objectives, the CBAM would extend carbon pricing to imported goods with the aim of limiting carbon leakage. Theoretical enquiry into this type of policy approach—known as border carbon adjustments (BCAs)—suggests economic and environmental benefits, but typically discounts the role of legal and practical constraints on BCA design and implementation. In this paper, we show why the BCA design commonly featured in past research—basing the adjustment level on default carbon intensities—runs counter to the economic logic of carbon pricing by distorting the incentives for emissions abatement. Requiring producers to demonstrate their actual carbon intensity captures additional economic benefits of carbon pricing and improves the overall legal prospects of a BCA, but adds to its administrative complexity and creates risk of avoidance practices such as ‘resource shuffling’. What emerges is a more nuanced understanding of BCAs that highlights the challenges when transitioning from theory to practice.
PAT1-type GRAS-domain proteins control regeneration by activating DOF3.4 to drive cell proliferation in Arabidopsis roots
Authors: Bisht Anchal , Eekhout Thomas , Canher Balkan , Lu Ran , Vercauteren Ilse , De Jaeger Geert , Heyman Jefri , De Veylder Lieven 
Published: February 2023

Abstract
Plant roots possess remarkable regenerative potential owing to their ability to replenish damaged or lost stem cells. ETHYLENE RESPONSE FACTOR 115 (ERF115), one of the key molecular elements linked to this potential, plays a predominant role in the activation of regenerative cell divisions. However, the downstream operating molecular machinery driving wound-activated cell division is largely unknown. Here, we biochemically and genetically identified the GRAS-domain transcription factor SCARECROW-LIKE 5 (SCL5) as an interaction partner of ERF115 in Arabidopsis thaliana. Although nonessential under control growth conditions, SCL5 acts redundantly with the related PHYTOCHROME A SIGNAL TRANSDUCTION 1 (PAT1) and SCL21 transcription factors to activate the expression of the DNA-BINDING ONE FINGER 3.4 (DOF3.4) transcription factor gene. DOF3.4 expression is wound-inducible in an ERF115-dependent manner and, in turn, activates D3-type cyclin expression. Accordingly, ectopic DOF3.4 expression drives periclinal cell division, while its downstream D3-type cyclins are essential for the regeneration of a damaged root. Our data highlight the importance and redundant roles of the SCL5, SCL21, and PAT1 transcription factors in wound-activated regeneration processes and pinpoint DOF3.4 as a key downstream element driving regenerative cell division.
Proteasomal degradation of MaMYB60 mediated by the E3 ligase MaBAH1 causes high temperature-induced repression of chlorophyll catabolism and green ripening in banana
Authors: Wei Wei , Yang Ying-ying , Lakshmanan Prakash , Kuang Jian-fei , Lu Wang-jin , Pang Xue-qun , Chen Jian-ye , Shan Wei 
Published: February 2023

Abstract
Banana (Musa acuminata) fruits ripening at 30 °C or above fail to develop yellow peels; this phenomenon, called green ripening, greatly reduces their marketability. The regulatory mechanism underpinning high temperature-induced green ripening remains unknown. Here we decoded a transcriptional and post-translational regulatory module that causes green ripening in banana. Banana fruits ripening at 30 °C showed greatly reduced expression of 5 chlorophyll catabolic genes (CCGs), MaNYC1 (NONYELLOW COLORING 1), MaPPH (PHEOPHYTINASE), MaTIC55 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 55), MaSGR1 (STAY-GREEN 1), and MaSGR2 (STAY-GREEN 2), compared to those ripening at 20 °C. We identified a MYB transcription factor, MaMYB60, that activated the expression of all 5 CCGs by directly binding to their promoters during banana ripening at 20 °C, while showing a weaker activation at 30 °C. At high temperatures, MaMYB60 was degraded. We discovered a RING-type E3 ligase MaBAH1 (benzoic acid hypersensitive 1) that ubiquitinated MaMYB60 during green ripening and targeted it for proteasomal degradation. MaBAH1 thus facilitated MaMYB60 degradation and attenuated MaMYB60-induced transactivation of CCGs and chlorophyll degradation. By contrast, MaMYB60 upregulation increased CCG expression, accelerated chlorophyll degradation, and mitigated green ripening. Collectively, our findings unravel a dynamic, temperature-responsive MaBAH1–MaMYB60–CCG module that regulates chlorophyll catabolism, and the molecular mechanism underpinning green ripening in banana. This study also advances our understanding of plant responses to high-temperature stress.
Anisotropic cell growth at the leaf base promotes age-related changes in leaf shape in Arabidopsis thaliana
Authors: Tang Hong-Bo , Wang Juan , Wang Long , Shang Guan-Dong , Xu Zhou-Geng , Mai Yan-Xia , Liu Ye-Tong , Zhang Tian-Qi , Wang Jia-Wei 
Published: February 2023

Abstract
Plants undergo extended morphogenesis. The shoot apical meristem (SAM) allows for reiterative development and the formation of new structures throughout the life of the plant. Intriguingly, the SAM produces morphologically different leaves in an age-dependent manner, a phenomenon known as heteroblasty. In Arabidopsis thaliana, the SAM produces small orbicular leaves in the juvenile phase, but gives rise to large elliptical leaves in the adult phase. Previous studies have established that a developmental decline of microRNA156 (miR156) is necessary and sufficient to trigger this leaf shape switch, although the underlying mechanism is poorly understood. Here we show that the gradual increase in miR156-targeted SQUAMOSA PROMOTER BINDING PROTEIN-LIKE transcription factors with age promotes cell growth anisotropy in the abaxial epidermis at the base of the leaf blade, evident by the formation of elongated giant cells. Time-lapse imaging and developmental genetics further revealed that the establishment of adult leaf shape is tightly associated with the longitudinal cell expansion of giant cells, accompanied by a prolonged cell proliferation phase in their vicinity. Our results thus provide a plausible cellular mechanism for heteroblasty in Arabidopsis, and contribute to our understanding of anisotropic growth in plants.
Tomato APETALA2 family member SlTOE1 regulates inflorescence branching by repressing SISTER OF TM3
Authors: Sun Shuai , Wang Xiaotian , Liu Zhiqiang , Bai Jingwei , Song Jia , Li Ren , Cui Xia 
Published: February 2023

Abstract
Inflorescence architecture directly impacts yield potential in most crops. As a model of sympodial plants, tomato (Solanum lycopersicum) inflorescence exhibits highly structural plasticity. However, the genetic regulatory network of inflorescence architecture in tomato remains unclear. Here, we investigated a modulator of inflorescence branching in tomato, TARGET OF EAT1 (SlTOE1), an APETALA2 (AP2) family member found to be predominantly expressed in the floral meristem (FM) of tomato. sltoe1 knockout mutants displayed highly branched inflorescences and defective floral organs. Transcriptome analysis revealed that SISTER OF TM3 (STM3) and certain floral development-related genes were upregulated in the flower meristem of sltoe1. SlTOE1 could directly bind the promoters of STM3 and Tomato MADS-box gene 3 (TM3) to repress their transcription. Simultaneous mutation of STM3 and TM3 partially restored the inflorescence branching of the sltoe1cr mutants, suggesting that SlTOE1 regulates inflorescence development, at least in part through an SlTOE1STM3/TM3 module. Genetic analysis showed that SlTOE1 and ENHANCER OF JOINTLESS 2 (EJ2) additively regulate tomato inflorescence branching; their double mutants showed more extensive inflorescence branching. Our findings uncover a pathway controlling tomato inflorescence branching and offer deeper insight into the functions of AP2 subfamily members.
Resuscitation in the First 3 Hours of Sepsis-Induced Hypotension Varies by Patient and Hospital Factors
Authors: Chen Jen-Ting , Roberts Russel J. , Sevransky Jonathan Eliot , Gong Michelle Ng ,   on behalf of the VOLUME-CHASERS Study Group, Discovery Network, Society of Critical Care Medicine
Published: February 2023

IMPORTANCE:
Patient and hospital factors affects how we resuscitate patients in the first 3 hours of sepsis-induced hypotension.

OBJECTIVES:
To evaluate variability in compliance to the 3-hour surviving sepsis campaign (SSC) bundle and explore the association of early compliance with subsequent shock and in-hospital mortality.

DESIGN:
Retrospective cohort study between September 2017 and February 2018.

SETTING:
Thirty-four academic medical centers.

PARTICIPANTS:
A subgroup sepsis-induced hypotensive patients from a larger shock cohort study.

MAIN OUTCOMES AND MEASURES:
Compliance to SSC bundle that was defined as receiving appropriate antibiotics, 30 mL/kg of crystalloid or initiation of vasopressors, and lactate, obtained in the first 3 hours following sepsis-induced hypotension.

RESULTS:
We included 977 patients with septic-induced hypotension. Bundle compliance was 43.8%, with the lowest compliance to fluid or vasopressor components (56%). Patients with high Sequential Organ Failure Assessment scores and physiologic assessments were more likely to receive compliant care, as were patients with sepsis-induced hypotension onset in the emergency department (ED) or admitted to mixed medical-surgical ICUs. SSC compliance was not associated with in-hospital mortality (adjusted odds ratio, 0.72; 95% CI, 0.47–1.10). The site-to-site variability contributed to SSC compliance (intraclass correlation coefficient [ICC], 0.15; 95% CI, 0.07–0.3) but not in-hospital mortality (ICC, 0.02; 95% CI, 0.001–0.24). Most patients remained in shock after 3 hours of resuscitation (SSC compliant 81.1% and noncompliant 53.7%). Mortality was higher among patients who were persistently hypotensive after 3 hours of resuscitation for both the SSC compliant (persistent hypotension 37% vs not hypotensive 27.2%; p = 0.094) and noncompliant (30.1% vs 18.2%; p = 0.001, respectively).

CONCLUSIONS AND RELEVANCE:
Patients with a higher severity of illness and sepsis-induced hypotension identified in the ED were more likely to receive SSC-compliant care. SSC compliance was not associated with in-hospital mortality after adjusting for patient- and hospital-level differences. Higher mortality is seen among those who remain in shock after initial resuscitation, regardless of SSC compliance.
Individualised flow-controlled versus pressure-controlled ventilation in a porcine oleic acid-induced acute respiratory distress syndrome model
Authors: Abram Julia , Martini Judith , Spraider Patrick , Putzer Gabriel , Ranalter Manuela , Wagner Julian , Glodny Bernhard , Hell Tobias , Barnes Tom , Enk Dietmar 
Published: February 2023

BACKGROUND
A continuous gas flow provided by flow-controlled ventilation (FCV) facilitates accurate dynamic compliance measurement and allows the clinician to individually optimise positive end-expiratory and peak pressure settings accordingly.

OBJECTIVE
The aim of this study was to compare the efficiency of gas exchange and impact on haemodynamics between individualised FCV and pressure-controlled ventilation (PCV) in a porcine model of oleic acid-induced acute respiratory distress syndrome (ARDS).

DESIGN
Randomised controlled interventional trial conducted on 16 pigs.

SETTING
Animal operating facility at the Medical University Innsbruck.

INTERVENTIONS
ARDS was induced in lung healthy pigs by intravenous infusion of oleic acid until moderate-to-severe ARDS at a stable Horowitz quotient (PaO2 FiO2
−1) of 80 to 120 over a period of 30 min was obtained. Ventilation was then either performed with individualised FCV (n = 8) established by compliance-guided pressure titration or PCV (n = 8) with compliance-guided titration of the positive end-expiratory pressure and peak pressure set to achieve a tidal volume of 6 ml kg−1 over a period of 2 h.

MAIN OUTCOME MEASURES
Gas exchange parameters were assessed by the PaO2
FiO2
−1 quotient and CO2 removal by the PaCO2 value in relation to required respiratory minute volume. Required catecholamine support for haemodynamic stabilisation was measured.

RESULTS
The FCV group showed significantly improved oxygenation [149.2 vs. 110.4, median difference (MD) 38.7 (8.0 to 69.5) PaO2 FiO2
−1; P = 0.027] and CO2 removal [PaCO2 7.25 vs. 9.05, MD −1.8 (−2.87 to −0.72) kPa; P = 0.006] at a significantly lower respiratory minute volume [8.4 vs. 11.9, MD −3.6 (−5.6 to −1.5) l min−1; P = 0.005] compared with PCV. In addition, in FCV-pigs, haemodynamic stabilisation occurred with a significant reduction of required catecholamine support [norepinephrine 0.26 vs. 0.86, MD −0.61 (−1.12 to −0.09) μg kg−1 min−1; P = 0.037] during 2 ventilation hours.

CONCLUSION
In this oleic acid-induced porcine ARDS model, individualised FCV significantly improved gas exchange and haemodynamic stability compared with PCV.

TRIAL REGISTRATION
Protocol no.: BMBWF-66.011/0105-V/3b/2019)
Impact of a Dedicated Outpatient Parenteral Antimicrobial Therapy Program on Peripherally Inserted Central Catheter Removal at a Large Academic Medical Center
Authors: Drwiega Emily , Rab Saira , Schechter Marcos C. , Andruski Rebecca , Maxam Meshell , Kundu Suprateek , Zheng Ziduo , Patel Manish 
Published: February 2023

Abstract

Background
Outpatient parenteral antimicrobial therapy (OPAT) is a strategy to administer parenteral antibiotics in the outpatient setting through a vascular access device, such as a peripherally inserted central catheter (PICC). Prompt PICC removal after OPAT completion can minimize potential complications of phlebitis, catheter-associated infections, and venous thrombosis. There is no literature evaluating the impact of a dedicated OPAT clinic on PICC removal.

Methods
This was a single-center, retrospective observational study. Patients 18 years or older discharged on OPAT were included. In March 2018, Grady Health System implemented a multidisciplinary OPAT clinic. The pre-OPAT clinic group included patients referred from January 1, 2017, through March 31, 2018, and the post-OPAT clinic group included patients referred from April 1, 2018, through June 30, 2019. The primary outcome was the rate of documented PICC removal before and after implementation of a dedicated OPAT clinic. Secondary outcomes included difference in rates and reasons for emergency department (ED) visits and readmissions, and difference in rates of OPAT follow-up visits between the 2 groups. The PICC removal rates were fitted in linear regression models for pre- and post-OPAT clinic groups, and the slopes of the 2 regression models were compared.

Results
A total of 450 patients were included: 230 and 220 in the pre- and post-OPAT clinic groups, respectively. In the pre-OPAT group, 180 patients (73.8%) had a documented PICC removal compared with 213 patients (86.6%) in the post-OPAT group (P < 0.001). There were significantly more patients who visited the ED for a PICC-related reason in the pre-OPAT clinic group (62 vs 44, P = 0.006).

Conclusions
The proportion of patients with documented PICC removal increased and the proportion of patients with a PICC-related ED visit decreased after the establishment of a dedicated OPAT clinic.
Dietary interventions using Facebook: a systematic review
Authors: Cunha Vera , Montenegro Susana , Padrão Patrícia 
Published: February 2023

Abstract

Introduction:
Facebook has been used to change food behaviors. The aim of this review was to synthesize the knowledge about the effect of nutritional interventions delivered through Facebook in dietary intake, food and nutritional knowledge and behavior, and weight management.

Methods:
PubMed, Web of Science, Ovid, Scopus, and Cochrane electronic databases were searched for intervention studies that were published from 2013 to 2019. This systematic review protocol was formulated based on Cochrane Guidelines for Systematic Reviews of Health Promotion and Public Health Interventions and Preferred Reporting Items for Systematic Reviews and Meta-Analysis (PRISMA).

Results:
Of the 4824 identified studies, 116 were considered for eligibility and 18 met the inclusion criteria of this review. Of these, 13 were randomized controlled trials, 2 were quasiexperimental studies, 2 were case studies, and 1 was a nonrandomized controlled trial. Interventions had a positive nutritional-related impact in most of the studies (78%).

Discussion:
Positive changes in dietary intake, food and nutritional knowledge and behavior, and weight management were observed in studies that used Facebook as a component of intervention. Facebook effectiveness by its own was difficult to evaluate considering that is frequently a component of intervention. The heterogeneity of the outcome variables between studies did not allow concluding about the effectiveness of this tool.
Comparison of intramedullary versus extramedullary alignment technique in total knee arthroplasty: A PRISMA-compliant meta-analysis
Authors: Li Ming , Li Jun , Hu Shuai , Jia Bingshen 
Published: February 2023

Background:
This meta-analysis aimed to compare the efficacy of intramedullary and extramedullary femoral alignment technique in treating total knee arthroplasty (TKA) patients.

Methods:
PubMed, Embase, Cochrane library, Chinese National Knowledge Infrastructure, and Weipu databases were electronically searched. Potential clinical studies that investigated the effect and safety of intramedullary versus extramedullary femoral alignment technique in TKA patients were searched. The primary outcome was lower limb coronal alignment. Stata 12.0 was used for meta-analysis.

Results:
This meta-analysis included 12 prospective randomized controlled studies that reported data on 935 TKA patients. No significant difference was noted in lower limb coronal alignment, coronal alignment of femoral component, sagittal alignment of femoral component and tibial slope between intramedullary and extramedullary alignment techniques (P > .05). Further, extramedullary alignment technique significantly decrease the total blood loss than intramedullary alignment technique (weighted mean difference: −86.52; 95% confidence interval: −115.05–−57.99; P = .000) and subsequently transfusion rate (risk ratio: 0.57; 95% confidence interval: 0.41–0.79; P = .000). Finally, there was no significant difference between intramedullary and extramedullary alignment techniques in terms of the total complications (P > .05).

Conclusions:
The present meta-analysis showed that intramedullary and extramedullary femoral alignment technique had comparable precise profiles. And extramedullary femoral alignment technique could reduce blood loss and blood transfusion. Total complications were comparable between the groups. More randomized controlled trials with large samples are required to verify the comparison of intramedullary and extramedullary femoral alignment technique in TKA patients.