bluuebunny/crossref_metadata_2025_split huggingface dataset:
Climate Change Science and Policy in Central Asia: Current Situation and Future Perspectives
Authors: Mirzabaev Alisher 
Published: April 2023

AbstractCentral Asia is already experiencing negative climate change impacts. Projections show that future climatic change will negatively affect many climate-sensitive economic activities in the region, particularly agricultural production and associated livelihoods. Mitigating and adapting to climate change in Central Asia requires a significant increase in investment in climate change research, as well as the mainstreaming of adaptation actions into public policies. This paper assesses the current state of climate change science in the region and the key trends, based on a bibliometric and content analysis review. It provides a perspective on investment priorities for climate change-related research, as well as measures that will build synergies between climate actions and other priorities for sustainable development in the region. The paper calls for an expansion in open access to data; increased investment in climate change research, especially in the social sciences; development of local climate change modelling capacities; and support for regional knowledge and scientific exchange on the topic of climate change.
A ‘Steppe’ into the Void: Central Asia in the Post-oil World
Authors: Skalamera Morena 
Published: April 2023

AbstractKazakhstan, Turkmenistan and Uzbekistan are petrostates and therefore trapped by the global energy transition. This chapter delves into the nexus between the effects of the energy transition, international stability and regime stability in Central Asia’s fossil-fuel dominated economies—a nexus of increasing theoretical and policy relevance as we enter a post-oil era in world politics. The Central Asian hydrocarbon producers are torn between their own aspirations to shift to a low-carbon economy and the vested interests of their elites, which are embedded in fossil-fuel dependency. Despite making international commitments to energy transition and developing policy frameworks to expand the renewable energy sector, the Central Asian petrostates have continued using foreign policy to seek fossil fuel revenue by forging new international trade and investment relations outside of the region. The chapter particularly highlights an under-researched aspect of the global energy transition, namely the role of informal elites in influencing foreign policy strategies, and in undermining energy transitions at the local level in doing so.
Comparison of outcomes of laparoscopic sacrocolpopexy with concomitant supracervical hysterectomy or uterine preservation
Authors: Sato Hirotaka , Otsuka Shota , Abe Hirokazu , Tsukada Sachiyuki 
Published: April 2023

Abstract
Introduction and hypothesis
Sacrocolpopexy was traditionally performed for post-hysterectomy prolapse or during concurrent hysterectomy. Sacrocolpopexy outcome with uterine preservation is poorly investigated. This study compared outcomes of laparoscopic sacrocolpopexy with concurrent supracervical hysterectomy or uterine preservation.

Methods
This retrospective study compared data of patients with pelvic organ prolapse who underwent laparoscopic sacrocolpopexy with uterine preservation with the data of controls who underwent laparoscopic sacrocolpopexy with supracervical hysterectomy. We analyzed composite failure in uterine preservation versus concurrent supracervical hysterectomy (primary objective) and evaluated factors associated with the primary outcome of composite failure after laparoscopic sacrocolpopexy with preservation or supracervical hysterectomy (secondary objective). Composite failure was defined as subjective bulge symptoms, reoperation, or anatomical prolapse. Cox models indicated time to composite failure as an endpoint.

Results
Of 274 patients, 232 underwent laparoscopic sacrocolpopexy with supracervical hysterectomy and 42 underwent laparoscopic uterine preservation. After propensity score matching (ratio: 2, for the laparoscopic sacrocolpopexy with supracervical hysterectomy group), 56 patients (24.1%) were in the supracervical hysterectomy group and 28 (66.7%) in the uterine preservation group. All patients underwent 24 months of follow-up. The composite failure rates were 10.7% for supracervical hysterectomy and 3.6% for preservation (p=0.87). The mean estimated blood loss was 10 ml (preservation, 10.0 ml [5.0–10.0] versus supracervical hysterectomy, 10.0 ml [10.0–15.0]; p=0.007). In the Cox proportional hazards model, higher preoperative body mass index and the point Ba increased composite failure risk.

Conclusions
Although not statistically significant, composite failure in the two techniques is likely clinically meaningful.
Halomonas elongata: a microbial source of highly stable enzymes for applied biotechnology
Authors: Benítez-Mateos Ana I. , Paradisi Francesca 
Published: April 2023

Abstract
Extremophilic microorganisms, which are resistant to extreme levels of temperature, salinity, pH, etc., have become popular tools for biotechnological applications. Due to their availability and cost-efficacy, enzymes from extremophiles are getting the attention of researchers and industries in the field of biocatalysis to catalyze diverse chemical reactions in a selective and sustainable manner. In this mini-review, we discuss the advantages of Halomonas elongata as moderate halophilic bacteria to provide suitable enzymes for biotechnology. While enzymes from H. elongata are more resistant to the presence of salt compared to their mesophilic counterparts, they are also easier to produce in heterologous hosts compared with more extremophilic microorganisms. Herein, a set of different enzymes (hydrolases, transferases, and oxidoreductases) from H. elongata are showcased, highlighting their interesting properties as more efficient and sustainable biocatalysts. With this, we aim to improve the visibility of halotolerant enzymes and their uncommon properties to integrate biocatalysis in industrial set-ups.

Keypoints
• Production and use of halotolerant enzymes can be easier than strong halophilic ones.
• Enzymes from halotolerant organisms are robust catalysts under harsh conditions.
• Halomonas elongata has shown a broad enzyme toolbox with biotechnology applications.
Staged HIV transmission and treatment in a dynamic model with long-term partnerships
Authors: Gurski Katharine , Hoffman Kathleen 
Published: April 2023

AbstractThe transmission dynamics of HIV are closely tied to the duration and overlap of sexual partnerships. We develop an autonomous population model that can account for the possibilities of an infection from either a casual sexual partner or a long-term partner who was either infected at the start of the partnership or has been newly infected since the onset of the partnership. The impact of the long-term partnerships on the rate of infection is captured by calculating the expected values of the rate of infection from these extended contacts. The model includes three stages of infectiousness: acute, chronic, and virally suppressed. We calculate HIV incidence and the fraction of new infections attributed to casual contacts and long-term partnerships allowing for variability in condom usage, the effect of achieving and maintaining viral suppression, and early intervention by beginning HAART during the acute phase of infection. We present our results using data on MSM HIV transmission from the CDC in the U.S. While the acute stage is the most infectious, the majority of the new infections will be transmitted by long-term partners in the chronic stage when condom use is infrequent as is common in long-term relationships. Time series analysis of the solution, as well as parameter sensitivity analysis, are used to determine effective intervention strategies.
Bringing Antarctica to the lab: a polar desert environmental chamber to study the response of Antarctic microbial communities to climate change
Authors: Monteiro Maria R. , Marshall Alexis J. , Lee Charles K. , McDonald Ian R. , Cary S. Craig 
Published: April 2023

AbstractPolar deserts contain unique and sensitive communities responsive to climate-associated habitat changes. However, unlike temperate desert ecosystems, characterizing and predicting the responses of polar ecosystems to environmental change remains a significant challenge due to logistical constraints. Here we aim to demonstrate the use of a custom-designed Polar Desert Environmental Chamber (PDEC) to perform off-continent experimental ecological research. We did so by characterizing the structure and composition of arid edaphic bacterial communities collected from the McMurdo Dry Valleys during a simulated wetting event. The results were discussed in light of previous field observations. Rapid structural and compositional changes were observed during wetting and re-drying treatments. Those were driven by changes in the relative abundance of coexisting taxa, which fluctuated asynchronously over time in response to the treatments. While selection was the main ecological factor influencing communities during dry conditions or the initial wetting, with prolonged exposure to wetness, neutral processes began to drive community assembly. Ultimately, these observations reflect different adaptative responses from microbial taxa to water stress, which can be argued as beneficial to increasing resilience in polar deserts. Our findings demonstrate that experiments conducted in PDEC provide valuable contextual data on community response to environmental change and can accelerate our ability to assess biological thresholds to change within polar desert ecosystems. We advocate that, with careful consideration of key emulated environmental attributes, laboratory-based Antarctic research can complement fieldwork to achieve a nuanced and evidence-based understanding of the ecology of Antarctica’s ice-free regions.
Low cancer yield in PI-RADS 3 upgraded to 4 by dynamic contrast-enhanced MRI: is it time to reconsider scoring categorization?
Authors: Messina Emanuele , Pecoraro Martina , Laschena Ludovica , Bicchetti Marco , Proietti Flavia , Ciardi Antonio , Leonardo Costantino , Sciarra Alessandro , Girometti Rossano , Catalano Carlo , Panebianco Valeria 
Published: April 2023

Abstract
Objectives
To evaluate MRI diagnostic performance in detecting clinically significant prostate cancer (csPCa) in peripheral-zone PI-RADS 4 lesions, comparing those with clearly restricted diffusion (DWI-score 4), and those with equivocal diffusion pattern (DWI-score 3) and positive dynamic contrast-enhanced (DCE) MRI.

Methods
This observational prospective study enrolled 389 men referred to MRI and, if positive (PI-RADS 3 with PSA-density [PSAD] ≥ 0.15 ng/mL/mL, 4 and 5), to MRI-directed biopsy. Lesions with DWI-score 3 and positive DCE were classified as “PI-RADS 3up,” instead of PI-RADS 4. Univariable and multivariable analyses were implemented to determine features correlated to csPCa detection.

Results
Prevalence of csPCa was 14.5% and 53.3% in PI-RADS categories 3up and 4, respectively (p < 0.001). MRI showed a sensitivity of 100.0%, specificity 40.9%, PPV 46.5%, NPV 100.0%, and accuracy 60.9% for csPCa detection. Modifying the threshold to consider MRI positive and to indicate biopsy (same as previously described, but PI-RADS 3up only when associated with elevated PSAD), the sensitivity changed to 93.9%, specificity 57.2%, PPV 53.0%, NPV 94.8%, and accuracy 69.7%. Age (p < 0.001), PSAD (p < 0.001), positive DWI (p < 0.001), and PI-RADS score (p = 0.04) resulted in independent predictors of csPCa.

Conclusions
Most cases of PI-RADS 3up were false-positives, suggesting that upgrading peripheral lesions with DWI-score 3 to PI-RADS 4 because of positive DCE has a detrimental effect on MRI accuracy, decreasing the true prevalence of csPCa in the PI-RADS 4 category. PI-RADS 3up should not be upgraded and directed to biopsy only if associated with increased PSAD.

Key Points
• As per PI-RADS v2.1 recommendations, in case of a peripheral zone lesion with equivocal diffusion-weighted imaging (DWI score 3), but positive dynamic contrast-enhanced (DCE) MRI, the overall PI-RADS score should be upgraded to 4.
• The current PI-RADS recommendation of upgrading PI-RADS 3 lesions of the peripheral zone to PI-RADS 4 because of positive DCE decreased clinically significant prostate cancer detection rate in our series.
• According to our results, the most accurate threshold for setting indication to prostate biopsy is PI-RADS 3 or PI-RADS 3 with positive DCE both associated with increased PSA density.
Physiological properties of the visual system in the Green Weaver ant, Oecophylla smaragdina
Authors: Ogawa Yuri , Jones Lochlan , Ryan Laura A. , Robson Simon K. A. , Hart Nathan S. , Narendra Ajay 
Published: April 2023

AbstractThe Green Weaver ants, Oecophylla smaragdina are iconic animals known for their extreme cooperative behaviour where they bridge gaps by linking to each other to build living chains. They are visually oriented animals, build chains towards closer targets, use celestial compass cues for navigation and are visual predators. Here, we describe their visual sensory capacity. The major workers of O. smaragdina have more ommatidia (804) in each eye compared to minor workers (508), but the facet diameters are comparable between both castes. We measured the impulse responses of the compound eye and found their response duration (42 ms) was similar to that seen in other slow-moving ants. We determined the flicker fusion frequency of the compound eye at the brightest light intensity to be 132 Hz, which is relatively fast for a walking insect suggesting the visual system is well suited for a diurnal lifestyle. Using pattern-electroretinography we identified the compound eye has a spatial resolving power of 0.5 cycles deg−1 and reached peak contrast sensitivity of 2.9 (35% Michelson contrast threshold) at 0.05 cycles deg−1. We discuss the relationship of spatial resolution and contrast sensitivity, with number of ommatidia and size of the lens.
The influence of age on greater sciatic notch morphology: testing the Walker method in an Australian population
Authors: DesMarais Angel , Obertova Zuzana , Franklin Daniel 
Published: April 2023

Abstract
Sex estimation is an integral aspect of a forensic biological profile. The pelvis, being the most dimorphic part of the skeleton, has been studied in considerable detail relative to morphological and metric variation. However, empirical data on the effect of age on pelvic morphology relative to sex-specific morphological variation is limited, especially in regard to the estimation of skeletal sex. This study assesses whether there are age-related differences in the distribution of the Walker (2005) morphological scores for the greater sciatic notch (GSN) in an Australian population. Three-dimensional volumetric reconstructions derived from multi-detector computed tomography (MDCT) scans of 567 pelves of 258 females and 309 males aged 18 to 96 years were scored following Walker (2005). Differences in score distributions and means by sex and age group were tested using Pearson’s chi-squared test and ANOVA, respectively. The accuracy of sex estimates derived from logistic regression equations was explored using leave-one-out cross-validation. Significant differences were found in score distribution and means among age groups in females, but not in males. There was a tendency toward higher scores in older females. The overall sex estimation accuracy was 87.5%. When comparing age groups 18–49 and 70 + years, estimation accuracy decreased in females (99% vs. 91%), while the opposite was found for males (79% vs. 87%). These findings suggest that age affects GSN morphology. Higher mean scores in older females imply that, on average, the GSN becomes narrower with increasing age. It is thus recommended due consideration of estimated age when assessing sex based on the GSN in unidentified human remains.
Assessment of macular microvascular changes in children following treatment of anisometropic myopic amblyopia using optical coherence tomography angiography
Authors: AttaAllah Heba Radi , Abdelaziz Sahar Torky Abdelrazik , Mohamed Asmaa Anwar Mohamed , Ibrahiem Mohamed Farag Khalil 
Published: April 2023

Abstract

Purpose

To evaluate macular microvascular changes in the form of foveal avascular zone (FAZ) area and vessel density in the superficial, deep capillary plexuses, and choriocapillaris using optical coherence tomography angiography (OCTA) in children with anisometropic myopic amblyopia before and after treatment.

Methods
This prospective observational study included 32 patients younger than 12 years old with anisomyopic amblyopia. OCTA was done before patients’ treatment with optical correction with or without patching and was repeated after successful amblyopia treatment. Outcomes included superficial, deep, and choriocapillaris vessel density (VD) and superficial and deep FAZ areas.

Results
The study included 13 males (40.6%) and 19 females (59.4%), and the mean age was 9.52 ± 1.33 years. Fifty-three percent (53%) of patients needed only optical correction, and the remaining 47% needed additional patching therapy. After successful treatment, there was a significant improvement in amblyopic eyes in best-corrected visual acuity (p < 0.001), with higher VD values in superficial capillary plexuses (p < 0.001), deep capillary plexuses (p < 0.001), and foveal choriocapillaris (p = 0.030). In the glasses with patching subgroup, the difference between pre-treatment and post-treatment parameters revealed a significant improvement in vessel density in superficial retinal plexuses (foveal and parafoveal; p values 0.023 and < 0.001, respectively) and deep retinal plexuses (whole image, foveal, and parafoveal; p values 0.003, < 0.001, and 0.002, respectively). While amblyopic eyes treated with glasses alone had a significantly greater difference in choriocapillaris foveal VD (p value = 0.022).

Conclusion
After effective amblyopia treatment, amblyopic eyes exhibited improved best-corrected visual acuity and better macular perfusion along the superficial, deep vascular density, and choriocapillaris foveal VD.

Clinical trial registration
CinicalTrials.gov Identifier: NCT05223153.
Comparison of specimen extraction site and another site for protective loop ileostomy in laparoscopic low anterior rectal resection: a retrospective comparative study
Authors: Liu Chao , Zhang Jizhun , Li Leping , Zhang Li , Shang Liang , Ma Yan 
Published: April 2023

Abstract
Background
Protective loop ileostomy is commonly performed in laparoscopic low anterior rectal resection to prevent the serious complications of anastomotic fistula. It is usually created at the right lower quadrant of the abdomen and another wound is required for stoma. The study aimed to evaluate the outcomes of ileostomy at the specimen extraction site (SES) and another site (AS) beside the auxiliary incision.

Methods
A retrospective analysis was conducted on 101 eligible patients with pathologically diagnosed adenocarcinoma of the rectum from January 2020 to December 2021 in the study center. According to whether the ileostomy was at the specimen extraction site, patients were divided into SES group (40 patients) and AS group (61 patients). Clinicopathological characteristics, the intraoperative details, and postoperative outcomes of the two groups were measured.

Results
Univariate analysis showed that the operative time was significantly shorter and the blood loss was significantly less in the SES group than in the AS group during laparoscopic low anterior rectal resection, the time to first flatus was significantly shorter, and the pain was significantly less in the SES group than in the AS group during ileostomy closure. The postoperative complications were similar in both groups. Multivariable analysis showed that ileostomy at the specimen extraction site was a significant factor influencing the operative time and blood loss of rectal resection, and influencing the pain and the time to first flatus during ileostomy closure.

Conclusion
Compared to ileostomy at AS, protective loop ileostomy at SES was time-saving and less bleeding during laparoscopic low anterior rectal resection, and more quick to first flatus and less pain during stoma closure, and did not lead to more postoperative complications. The median incision of the lower abdomen and the left lower abdominal incision were both good sites for ileostomy.
A comparison of numerical approaches for statistical inference with stochastic models
Authors: Bacci Marco , Sukys Jonas , Reichert Peter , Ulzega Simone , Albert Carlo 
Published: April 2023

AbstractDue to our limited knowledge about complex environmental systems, our predictions of their behavior under different scenarios or decision alternatives are subject to considerable uncertainty. As this uncertainty can often be relevant for societal decisions, the consideration, quantification and communication of it is very important. Due to internal stochasticity, often poorly known influence factors, and only partly known mechanisms, in many cases, a stochastic model is needed to get an adequate description of uncertainty. As this implies the need to infer constant parameters, as well as the time-course of stochastic model states, a very high-dimensional inference problem for model calibration has to be solved. This is very challenging from a methodological and a numerical perspective. To illustrate aspects of this problem and show options to successfully tackle it, we compare three numerical approaches: Hamiltonian Monte Carlo, Particle Markov Chain Monte Carlo, and Conditional Ornstein-Uhlenbeck Sampling. As a case study, we select the analysis of hydrological data with a stochastic hydrological model. We conclude that the performance of the investigated techniques is comparable for the analyzed system, and that also generality and practical considerations may be taken into account to guide the choice of which technique is more appropriate for a particular application.