bluuebunny/crossref_metadata_2025_split huggingface dataset:
Massless and partially massless limits in Quadratic Gravity
Authors: Buoninfante Luca 
Published: December 2023

Abstract
In the context of perturbative quantum field theory, the addition of quadratic-curvature invariants to the Einstein-Hilbert action makes it possible to achieve strict renormalizability in four dimensions. The additional terms R2 and CμνρσCμνρσ are multiplied by dimensionless coefficients that are related to the masses of the extra gravitational degrees of freedom and to the interaction couplings. The aim of this paper is to study the limit of the theory in which the Weyl-squared coefficient tends to infinity. Remarkably, the result of this limit turns out to be sensitive to the presence of a cosmological constant: when the latter is zero we have a massless limit for the spin-2 ghost, while when the cosmological constant is different from zero we obtain a partially massless limit. We show that the renormalizability property and the ghost-like nature of the massive spin-2 field ensure that the two limits do not hit strong couplings, unlike standard ghost-free theories of massive gravity. In particular, in the partially massless limit the interactions mediated by the spin-2 sector vanish. We argue that our results can be useful for understanding the high-energy limit of Quadratic Gravity.
Operator growth and Krylov complexity in Bose-Hubbard model
Authors: Bhattacharyya Arpan , Ghosh Debodirna , Nandi Poulami 
Published: December 2023

Abstract
We study Krylov complexity of a one-dimensional Bosonic system, the celebrated Bose-Hubbard Model. The Bose-Hubbard Hamiltonian consists of interacting bosons on a lattice, describing ultra-cold atoms. Apart from showing superfluid-Mott insulator phase transition, the model also exhibits both chaotic and integrable (mixed) dynamics depending on the value of the interaction parameter. We focus on the three-site Bose Hubbard Model (with different particle numbers), which is known to be highly mixed. We use the Lanczos algorithm to find the Lanczos coefficients and the Krylov basis. The orthonormal Krylov basis captures the operator growth for a system with a given Hamiltonian. However, the Lanczos algorithm needs to be modified for our case due to the instabilities instilled by the piling up of computational errors. Next, we compute the Krylov complexity and its early and late-time behaviour. Our results capture the chaotic and integrable nature of the system. Our paper takes the first step to use the Lanczos algorithm non-perturbatively for a discrete quartic bosonic Hamiltonian without depending on the auto-correlation method.
Holography of information in de Sitter space
Authors: Chakraborty Tuneer , Chakravarty Joydeep , Godet Victor , Paul Priyadarshi , Raju Suvrat 
Published: December 2023

Abstract
We study the natural norm on the space of solutions to the Wheeler-DeWitt equation in an asymptotically de Sitter spacetime. We propose that the norm is obtained by integrating the squared wavefunctional over field configurations and dividing by the volume of the diff-and-Weyl group. We impose appropriate gauge conditions to fix the diff- and-Weyl redundancy and obtain a finite expression for the norm using the Faddeev-Popov procedure. This leads to a ghost action that has zero modes corresponding to a residual conformal subgroup of the diff-and-Weyl group. By keeping track of these zero modes, we show that Higuchi’s norm for group-averaged states emerges from our prescription in the nongravitational limit. We apply our formalism to cosmological correlators and propose that they should be understood as gauge-fixed observables. We identify the symmetries of these observables. In a nongravitational theory, it is necessary to specify such correlators everywhere on a Cauchy slice to identify a state in the Hilbert space. In a theory of quantum gravity, we demonstrate a version of the principle of holography of information: cosmological correlators in an arbitrarily small region suffice to completely specify the state.
Identification of a novel SNP in the miR172 binding site of Q homoeolog AP2L-D5 is associated with spike compactness and agronomic traits in wheat (Triticum aestivum L.)
Authors: Zeng Victoria , Uauy Cristobal , Chen Yi 
Published: December 2023

Abstract
Key message
This study found that the compact spike locus of ANK-15 is on chromosome 5D instead of 2B. We have identified a new allele of AP2L-D5 as the candidate causal polymorphism.

Abstract
Spike architecture is a key determinant of wheat yield, a crop which supports much of the human diet but whose yield gains are stagnating. Spike architecture mutants offer opportunities to identify genetic factors contributing to inflorescence development. Here, we investigate the locus underlying the compact spike phenotype of mutant line ANK-15 by conducting mRNA-sequencing and genetic mapping using ANK-15 and its non-compact spike near-isogenic line Novosibirskaya 67 (N67). Previous literature has placed the compact spike locus of ANK-15 to chromosome 2B. However, based on the single nucleotide polymorphisms (SNPs) identified using mRNA-seq data, we were unable to detect polymorphisms between N67 and ANK-15 in the putative chromosome 2B region. We performed differential expression analysis of developing rachis and found that AP2L-D5, the D homoeolog of the domestication Q gene, is upregulated in ANK-15 in comparison to N67. ANK-15 carries a SNP in the microRNA172 binding site of AP2L-D5, which is predicted to lead to higher expression of AP2L-D5 due to decreased miRNA172-mediated degradation. Furthermore, we performed genetic mapping using an ANK-15 × N67 F2 population and found a single quantitative trait locus on chromosome 5D coinciding with the position of AP2L-D5. This result suggests that AP2L-D5 is likely the underlying causal gene for the compact spike phenotype in ANK-15. We performed a field trial to investigate the effect of the AP2L-D5 allele on agronomic traits and found that the AP2L-D5 allele from ANK-15 is associated with a significant reduction in height, increased thousand grain weight (TGW), and increased grain width.
Persistent Organic Pollutants in Whale Shark (Rhincodon typus) Skin Biopsies from Bahía de Los Ángeles, Mexico
Authors: Villagómez-Vélez Stephanie Itzel , Noreña-Barroso Elsa , Galván-Magaña Felipe , González-Armas Rogelio , Rodríguez-Fuentes Gabriela , Marmolejo-Rodríguez Ana Judith 
Published: December 2023

AbstractThe whale shark (Rhincodon typus) is a filter-feeding organism that can be considered a sentinel species, and Bahía de los Ángeles (BLA) in the Gulf of California is an important sighting site for these elasmobranchs. This filter-feeding organism can be considered a pollutant sampler from the marine environment. Persistent organic pollutants are toxic compounds with high mobility and environmental persistence, bioaccumulation and trophic transfer. Among these are polycyclic aromatic hydrocarbons (PAHs) and organochlorine pesticides (OCPs). The present work aimed to determine concentrations of PAHs and OCPs in whale shark skin biopsies, collected in 2021 at BLA. Mean detected levels of PAHs and OCPs were 279.4 ng/g dw (dry weight) and 1478.1 ng/g dw, respectively. Analysis of similarities between the ordered sizes (4.2–7.6 m) and the concentrations of PAHs and OCPs indicated no significant differences. Individual PAHs detected indicate pyrogenic and petrogenic sources; the presence of pesticides at levels higher than those of hydrocarbons may be related to agricultural activity in the areas surrounding the Baja California peninsula. This study is the first report of PAH levels in R. typus for the Gulf of California and Mexico.
Contribution to ecological environmental factors and the occurrence of haemosporidians in birds in Zhongar Alatau National Park, Kazakhstan
Authors: Haas Martina , Ploščicová Lenka 
Published: December 2023

AbstractIn addition to the presence of a suitable host and vector, the prevalence of haemosporidians is influenced by several important factors, including the environmental conditions of the habitat, which depend on broader geographic characteristics. The aim of this study is to perform a preliminarily assessment of the distribution of blood parasites in birds from the mountainous area of Zhongar Alatau NP and to find potential new sites for research on their ecology in Kazakhstan. The results of this research constitute the first report on the occurrence of blood parasites from this area. A total of 58 birds, from the order Passeriformes and one individual from the order Caprimulgiformes, were examined during the study. The overall prevalence of infections caused by haemosporidian parasites (Haemoproteus, Leucocytozoon) was 18.6%. Neither the genus Plasmodium nor the presence of trypanosomes and microfilariae was detected in the birds examined. Three birds (5.1% prevalence) were infected with parasites of the genus Haemoproteus, in all eleven positive birds the analyses showed the presence of parasites of the genus Leucocytozoon (18.6% prevalence). The presence of parasites genus Haemoproteus was detected only in birds that were also infected with Leucocytozoon parasites. More infections with parasites of the genus Leucocytozoon are predicted due to the higher altitude and ecological factors at the capture sites, which are more favourable for the development of vectors of this genus. The species Haemoproteus majoris was detected in the host Emberiza cioides and species Haemoproteus minutus in host Turdus merula. Other species of this genus in the hosts Cyanistes cyanus and Turdus atrogularis were not determined. The species Leucocytozoon fringilinarum was detected in the hosts Cyanistes cyanus and Parus major, Leucocytozoon dubreuili was detected in Turdus atrogularis and Turdus merula. In the other host species Aegithalos caudatus, Emberiza cioides and Periparus aterus, it was not possible to dermine the species of the genus Leucocytozoon.
Optimizing the use of low-frequency ultrasound for bacterial detachment of in vivo biofilms in dental research—a methodological study
Authors: Rux Cassandra , Wittmer Annette , Stork Anja , Vach Kirstin , Hellwig Elmar , Cieplik Fabian , Al-Ahmad Ali 
Published: December 2023

Abstract
Objectives
Low-frequency, low-intensity ultrasound is commonly utilized in various dental research fields to remove biofilms from surfaces, but no clear recommendation exists in dental studies so far. Therefore, this study aims to optimize the sonication procedure for the dental field to efficiently detach bacteria while preserving viability.

Materials and methods
Initial biofilm was formed in vivo on bovine enamel slabs (n = 6) which were worn by four healthy participants for 4 h and 24 h. The enamel slabs covered with biofilm were then ultrasonicated ex vivo for various time periods (0, 1, 2, 4, 6 min). Colony-forming units were determined for quantification, and bacteria were identified using MALDI-TOF. Scanning electron microscopic images were taken to also examine the efficiency of ultrasonications for different time periods.

Results
Ultrasonication for 1 min resulted in the highest bacterial counts, with at least 4.5-fold number compared to the non-sonicated control (p < 0.05). Most bacteria were detached within the first 2 min of sonication, but there were still bacteria detached afterwards, although significantly fewer (p < 0.0001). The highest bacterial diversity was observed after 1 and 2 min of sonication (p < 0.03). Longer sonication periods negatively affected bacterial counts of anaerobes, Gram-negative bacteria, and bacilli. Scanning electron microscopic images demonstrated the ability of ultrasound to desorb microorganisms, as well as revealing cell damage and remaining bacteria.

Conclusions
With the use of low-frequency, low-intensity ultrasound, significantly higher bacterial counts and diversity can be reached. A shorter sonication time of 1 min shows the best results overall.

Clinical relevance
This standardization is recommended to study initial oral biofilms aged up to 24 h to maximize the outcome of experiments and lead to better comparability of studies.
Mechano-chemo-biological model of atherosclerosis formation based on the outside-in theory
Authors: Gierig Meike , Tragoudas Alexandros , Haverich Axel , Wriggers Peter 
Published: December 2023

AbstractAtherosclerosis is a disease in blood vessels that often results in plaque formation and lumen narrowing. It is an inflammatory response of the tissue caused by disruptions in the vessel wall nourishment. Blood vessels are nourished by nutrients originating from the blood of the lumen. In medium-sized and larger vessels, nutrients are additionally provided from outside through a network of capillaries called vasa vasorum. It has recently been hypothesized (Haverich in Circulation 135:205–207, 2017) that the root of atherosclerotic diseases is the malfunction of the vasa vasorum. This, so-called outside-in theory, is supported by a recently developed numerical model (Soleimani et al. in Arch Comput Methods Eng 28:4263–4282, 2021) accounting for the inflammation initiation in the adventitial layer of the blood vessel. Building on the previous findings, this work proposes an extended material model for atherosclerosis formation that is based on the outside-in theory. Beside the description of growth kinematics and nutrient diffusion, the roles of monocytes, macrophages, foam cells, smooth muscle cells and collagen are accounted for in a nonlinear continuum mechanics framework. Cells are activated due to a lack of vessel wall nourishment and proliferate, migrate, differentiate and synthesize collagen, leading to the formation of a plaque. Numerical studies show that the onset of atherosclerosis can qualitatively be reproduced and back the new theory.
Exploring the Association Between EEG Microstates During Resting-State and Error-Related Activity in Young Children
Authors: Bagdasarov Armen , Roberts Kenneth , Brunet Denis , Michel Christoph M. , Gaffrey Michael S. 
Published: December 2023

AbstractThe error-related negativity (ERN) is a negative deflection in the electroencephalography (EEG) waveform at frontal-central scalp sites that occurs after error commission. The relationship between the ERN and broader patterns of brain activity measured across the entire scalp that support error processing during early childhood is unclear. We examined the relationship between the ERN and EEG microstates – whole-brain patterns of dynamically evolving scalp potential topographies that reflect periods of synchronized neural activity – during both a go/no-go task and resting-state in 90, 4-8-year-old children. The mean amplitude of the ERN was quantified during the -64 to 108 millisecond (ms) period of time relative to error commission, which was determined by data-driven microstate segmentation of error-related activity. We found that greater magnitude of the ERN associated with greater global explained variance (GEV; i.e., the percentage of total variance in the data explained by a given microstate) of an error-related microstate observed during the same -64 to 108 ms period (i.e., error-related microstate 3), and to greater anxiety risk as measured by parent-reported behavioral inhibition. During resting-state, six data-driven microstates were identified. Both greater magnitude of the ERN and greater GEV values of error-related microstate 3 associated with greater GEV values of resting-state microstate 4, which showed a frontal-central scalp topography. Source localization results revealed overlap between the underlying neural generators of error-related microstate 3 and resting-state microstate 4 and canonical brain networks (e.g., ventral attention) known to support the higher-order cognitive processes involved in error processing. Taken together, our results clarify how individual differences in error-related and intrinsic brain activity are related and enhance our understanding of developing brain network function and organization supporting error processing during early childhood.
An Online HIV Self-Sampling Strategy for Gay, Bisexual and Other Men Who Have Sex with Men and Trans Women in Spain
Authors: Martínez-Riveros Héctor , Díaz Yesika , Montoro-Fernandez Marcos , Moreno-Fornés Sergio , González Victoria , Muntada Esteve , Romano-deGea Pol , Muñoz Rafael , Hoyos Juan , Casabona Jordi , Agustí Cristina 
Published: December 2023

AbstractWe aimed to evaluate the feasibility of an online self-sampling pilot intervention for HIV testing addressed to gay, bisexual, and other men who have sex with men (GBMSM) and trans women (TW) users of dating apps in Spain. The website https://www.testate.org/ was designed to offer self-sampling kits for HIV testing and online consultation of the results. It was advertised on gay dating apps. Participants requested the delivery of a saliva self-sampling kit by mail and a postage-paid envelope to send the sample to the reference laboratory. An anonymous acceptability survey was conducted. The cascade of care was estimated. From November 2018 to December 2021, 4623 individual users ordered self-sampling kits, 3097 returned an oral fluid sample to the reference laboratory (67.5% return rate). 87 reactive results were detected. 76 were confirmed to be HIV-positive, we estimated an HIV prevalence of 2.45% (95% CI 1.9–3.0%). 100% of those referred to specialized care are in treatment. 44.3% (44.27%) of participants took more than one test. 23 incident cases were detected among repeat testers, of which 20 were confirmed. The estimated incidence was 1.00 confirmed case per 100 individual-years of follow-up. 98.01% of participants would recommend it to a friend. The most identified advantages were convenience and privacy. We demonstrated that the online offer of oral self-sampling kits for HIV detection and reporting results online among GBMSM and TW users of dating apps is feasible. The intervention counted with a high acceptability and high efficacy (in terms of reactivity, confirmation and linkage to care rates).
Optimization of the bicinchoninic acid assay for quantifying carbohydrates of soil extracellular polymeric substances
Authors: Bublitz Tabata Aline , Oliva Rebeca Leme , Hupe Anke , Joergensen Rainer Georg 
Published: December 2023

Abstract
Background and aims
The bicinchoninic acid (BCA) method was not yet applied on soil extracts of extracellular polymeric substances (EPS) to quantify polysaccharides, although this might be possible by introducing a cleavage step to produce monosaccharides. A pre-extraction with CaCl2 to remove interfering substances is usually performed before extracting EPS. The main objective of this study was to optimize the BCA assay for total carbohydrates quantification by applying a hydrolysis step to the EPS extracts, while also testing carbohydrate contents of CaCl2 pre-extracts.

Methods
Total carbohydrates were quantified with BCA in EPS extracts of three soils, after hydrolysis with H2SO4, using two acid concentrations (0.75 and 1.0 M), three hydrolysis temperatures (100, 120 and 130 °C), and five hydrolysis times (10, 30, 50, 70, and 90 min). EPS were extracted with the cation exchange resin (CER) method adapted to soils. Two versions of pre-extraction with CaCl2 were tested twice consecutively.

Results
More carbohydrates were measured after hydrolysis with 0.75 M H2SO4 at below 100 °C and after 10 min for all soils. Decreasing values were seen after longer reaction times and higher temperatures. CaCl2 extracted no or negligible amounts of carbohydrates from the soil.

Conclusion
The pre-extraction step can be done without in most cases. The BCA assay is free of toxicity and easily performed, while also tolerant to interferences from most compounds in EPS extracts. These characteristics highlight the potential of this method for a rapid quantification of carbohydrates in studies of extractable polymers in several areas of soil biogeochemistry.
Analysis of scientific and technological trends in the incorporation of activated carbon in advanced oxidation processes—a bibliometric study
Authors: Montenegro-Apraez Diego , Machuca-Martínez Fiderman 
Published: December 2023

AbstractThere is high interest in the development of water pollution remediation technologies. Advanced oxidation processes (AOPs) are a promising alternative for the degradation of organic compounds; however, these technologies have been limited mainly by high operating costs and, in some cases, by forming byproducts, which can be more hazardous than the original pollutants. Activated carbon (AC) is a porous material that can be combined with AOP systems in various ways, given its adsorbent and catalytic characteristics. In addition, AC is a flexible, adaptable, and low-cost material. This article presents a bibliometric analysis of AOPs incorporating CA in scientific research and patents; the Scopus database was used to obtain patents and Orbit Express for patents. The most investigated AOPs incorporating AC are photocatalysis processes, Fenton processes, persulfate-based AOP, electrochemical processes, and ozonation. However, it is the persulfate-based AOP that has seen the greatest growth in scientific publications in recent years; this great interest can be related to the synergy that the process has with AC, allowing the degradation of contaminants via radical and non-radical. According to the maturity analysis of scientific publications, photocatalysis, Fenton, electrochemistry, ozonation, and persulfate technologies are in a growth stage and will reach maturity in 2034, 2042, 2040, 2034, and 2035, respectively; these technologies coupled with AC are expected to generate a greater number of patents when they reach maturity.
Nanozyme as detector and remediator to environmental pollutants: between current situation and future prospective
Authors: Elkomy Hager A. , El-Naggar Shimaa A. , Elantary Mariam A. , Gamea Sherif M. , Ragab Mahmoud A. , Basyouni Omar M. , Mouhamed Moustafa S. , Elnajjar Fares F. 
Published: December 2023

AbstractThe term “nanozyme” refers to a nanomaterial possessing enzymatic capabilities, and in recent years, the field of nanozymes has experienced rapid advancement. Nanozymes offer distinct advantages over natural enzymes, including ease of production, cost-effectiveness, prolonged storage capabilities, and exceptional environmental stability. In this review, we provide a concise overview of various common applications of nanozymes, encompassing the detection and removal of pollutants such as pathogens, toxic ions, pesticides, phenols, organic contaminants, air pollution, and antibiotic residues. Furthermore, our focus is directed towards the potential challenges and future developments within the realm of nanozymes. The burgeoning applications of nanozymes in bioscience and technology have kindled significant interest in research in this domain, and it is anticipated that nanozymes will soon become a topic of explosive discussion.
Graphical Abstract