bluuebunny/crossref_metadata_2025_split huggingface dataset:
Twitter discussions on breastfeeding during the COVID-19 pandemic
Authors: Jagarapu Jawahar , Diaz Marlon I. , Lehmann Christoph U. , Medford Richard J. 
Published: November 2023

Abstract
Background
Breastfeeding is a critical health intervention in infants. Recent literature reported that the COVID-19 pandemic resulted in significant mental health issues in pregnant and breastfeeding women due to social isolation and lack of direct professional support. These maternal mental health issues affected infant nutrition and decreased breastfeeding rates during COVID-19. Twitter, a popular social media platform, can provide insight into public perceptions and sentiment about various health-related topics. With evidence of significant mental health issues among women during the COVID-19 pandemic, the perception of infant nutrition, specifically breastfeeding, remains unknown.

Methods
We aimed to understand public perceptions and sentiment regarding breastfeeding during the COVID-19 pandemic through Twitter analysis using natural language processing techniques. We collected and analyzed tweets related to breastfeeding and COVID-19 during the pandemic from January 2020 to May 2022. We used Python software (v3.9.0) for all data processing and analyses. We performed sentiment and emotion analysis of the tweets using natural language processing libraries and topic modeling using an unsupervised machine-learning algorithm.

Results
We analyzed 40,628 tweets related to breastfeeding and COVID-19 generated by 28,216 users. Emotion analysis revealed predominantly “Positive emotions” regarding breastfeeding, comprising 72% of tweets. The overall tweet sentiment was positive, with a mean weekly sentiment of 0.25 throughout, and was affected by external events. Topic modeling revealed six significant themes related to breastfeeding and COVID-19. Passive immunity through breastfeeding after maternal vaccination had the highest mean positive sentiment score of 0.32.

Conclusions
Our study provides insight into public perceptions and sentiment regarding breastfeeding during the COVID-19 pandemic. Contrary to other topics we explored in the context of COVID (e.g., ivermectin, disinformation), we found that breastfeeding had an overall positive sentiment during the pandemic despite the documented rise in mental health challenges in pregnant and breastfeeding mothers. The wide range of topics on Twitter related to breastfeeding provides an opportunity for active engagement by the medical community and timely dissemination of advice, support, and guidance. Future studies should leverage social media analysis to gain real-time insight into public health topics of importance in child health and apply targeted interventions.
NRTPredictor: identifying rice root cell state in single-cell RNA-seq via ensemble learning
Authors: Wang Hao , Lin Yu-Nan , Yan Shen , Hong Jing-Peng , Tan Jia-Rui , Chen Yan-Qing , Cao Yong-Sheng , Fang Wei 
Published: November 2023

Abstract
Background
Single-cell RNA sequencing (scRNA-seq) measurements of gene expression show great promise for studying the cellular heterogeneity of rice roots. How precisely annotating cell identity is a major unresolved problem in plant scRNA-seq analysis due to the inherent high dimensionality and sparsity.

Results
To address this challenge, we present NRTPredictor, an ensemble-learning system, to predict rice root cell stage and mine biomarkers through complete model interpretability. The performance of NRTPredictor was evaluated using a test dataset, with 98.01% accuracy and 95.45% recall. With the power of interpretability provided by NRTPredictor, our model recognizes 110 marker genes partially involved in phenylpropanoid biosynthesis. Expression patterns of rice root could be mapped by the above-mentioned candidate genes, showing the superiority of NRTPredictor. Integrated analysis of scRNA and bulk RNA-seq data revealed aberrant expression of Epidermis cell subpopulations in flooding, Pi, and salt stresses.

Conclusion
Taken together, our results demonstrate that NRTPredictor is a useful tool for automated prediction of rice root cell stage and provides a valuable resource for deciphering the rice root cellular heterogeneity and the molecular mechanisms of flooding, Pi, and salt stresses. Based on the proposed model, a free webserver has been established, which is available at https://www.cgris.net/nrtp.
Orthopaedic surgeons’ ability to detect pathologic hip fractures: review of 1484 fractures reported to the Norwegian Hip Fracture Register
Authors: Sund Anders , Dybvik Eva , Gjertsen Jan-Erik 
Published: November 2023

Abstract
Background
The proximal femur is the most common location of metastases in the appendicular skeleton. Data on pathologic hip fractures, however, are sparse despite it is the most frequently operated pathologic fracture. The aim of this study was to investigate the ability of orthopaedic surgeons to identify pathologic hip fractures in an acute setting and secondly to validate the underlying cause of the pathologic fractures reported to Norwegian Hip Fracture Register (NHFR).

Methods
In the NHFR dataset between 2005 and 2019, we identified 1484 fractures reported to be pathologic possibly secondary to a malignancy. These fractures were thoroughly validated by reviewing X-rays, the patient journal, the operation description for date, side, why there had been suspicion of pathologic fracture, and implant choice. Pathology reports were reviewed once a biopsy had been performed. Based on this validation, information in the NHFR was corrected, whenever necessary.

Results
Of the 1484 fractures possible secondary to malignancy, 485 (32.7%) were not a pathologic fracture. When reviewing the 999 validated pathologic fractures, 15 patients had a pathologic fracture secondary to a benign lesion. The remaining 984 patients had a pathologic fracture secondary to malignancy. The underlying diagnosis reported was corrected in 442 of the 999 patients. The true rate of pathologic hip fractures secondary to malignancy in our material was 0.8%, and most patients had underlying prostate (30%), breast (20%), or lung (17%) cancer.

Conclusion
Orthopaedic surgeons in Norway failed to report correct data on pathologic fractures and the corresponding cancer diagnosis in an acute setting in many patients. The corrected data on pathologic fractures in the NHFR from 2005 to 2019 can now be a valid resource for further studies on the subject.
Utilization of carbon-coated ZrO2/Mn-Mg-Zn ferrites nanostructures for the adsorption of Cs (I) and Sr (II) from the binary system: kinetic and equilibrium studies
Authors: Abdel Maksoud M. I. A. , Murad G. A. , Hassan H. S. 
Published: November 2023

AbstractCarbon-coated ZrO2/Mn-Mg-Zn ferrites nanostructures (CZ-FN) have been prepared as a new inorganic sorbent to remove Cs (I) and Sr (II) from a waste stream. Adsorption of Cs (I) and Sr (II) has been implemented considering different noteworthy parameters, for example, shaking time and the optimum time achieved high adsorption capacity of both ions [103 and 41 mg/g for Sr (II) and Cs (I)] was found 30 min. Also, the impact of pH values was studied; the best pH value for the adsorption process is pH 6. The adsorption saturation capacity of CZ-FN is 420.22 and 250.45 mg/g for strontium and cesium, respectively. The solubility percentage of CZ-FN was calculated utilizing diverse molarities from HNO3, HCl, and NaOH as eluents, the obtained data reveals an increase in the solubility percentage with more increase in the molarity of the eluents. The elevation in the solubility percentage follows the following order; HNO3 < HCl < NaOH. The kinetic studies were applied using the nanolinear form of different kinetic models; it was found that the adsorption process obeys the nonlinear pseudo-second-order. According to equilibrium studies, the Langmuir model has been more accurate than the Freundlich model for adsorption in the case of binary systems. The values of Di for the strontium and cesium are 10−10 m2/s, which displays the chemisorption nature of this process. The greatest values of the desorption process for the strontium and cesium are 96.87% and 94.43 by 0.3 M of HNO3. This indicated that the carbon-coated ZrO2/Mn-Mg-Zn ferrites could be regenerated and recycled to remove strontium and cesium ions from waste streams.
Proteomic characterization of a lutein-hyperaccumulating Chlamydomonas reinhardtii mutant reveals photoprotection-related factors as targets for increasing cellular carotenoid content
Authors: McQuillan Josie L. , Cutolo Edoardo Andrea , Evans Caroline , Pandhal Jagroop 
Published: November 2023

Abstract
Background
Microalgae are emerging hosts for the sustainable production of lutein, a high-value carotenoid; however, to be commercially competitive with existing systems, their capacity for lutein sequestration must be augmented. Previous attempts to boost microalgal lutein production have focussed on upregulating carotenoid biosynthetic enzymes, in part due to a lack of metabolic engineering targets for expanding lutein storage.

Results
Here, we isolated a lutein hyper-producing mutant of the model green microalga Chlamydomonas reinhardtii and characterized the metabolic mechanisms driving its enhanced lutein accumulation using label-free quantitative proteomics. Norflurazon- and high light-resistant C. reinhardtii mutants were screened to yield four mutant lines that produced significantly more lutein per cell compared to the CC-125 parental strain. Mutant 5 (Mut-5) exhibited a 5.4-fold increase in lutein content per cell, which to our knowledge is the highest fold increase of lutein in C. reinhardtii resulting from mutagenesis or metabolic engineering so far. Comparative proteomics of Mut-5 against its parental strain CC-125 revealed an increased abundance of light-harvesting complex-like proteins involved in photoprotection, among differences in pigment biosynthesis, central carbon metabolism, and translation. Further characterization of Mut-5 under varying light conditions revealed constitutive overexpression of the photoprotective proteins light-harvesting complex stress-related 1 (LHCSR1) and LHCSR3 and PSII subunit S regardless of light intensity, and increased accrual of total chlorophyll and carotenoids as light intensity increased. Although the photosynthetic efficiency of Mut-5 was comparatively lower than CC-125, the amplitude of non-photochemical quenching responses of Mut-5 was 4.5-fold higher than in CC-125 at low irradiance.

Conclusions
We used C. reinhardtii as a model green alga and identified light-harvesting complex-like proteins (among others) as potential metabolic engineering targets to enhance lutein accumulation in microalgae. These have the added value of imparting resistance to high light, although partially compromising photosynthetic efficiency. Further genetic characterization and engineering of Mut-5 could lead to the discovery of unknown players in photoprotective mechanisms and the development of a potent microalgal lutein production system.
The Streptococcus virulence protein PepO triggers anti-tumor immune responses by reprograming tumor-associated macrophages in a mouse triple negative breast cancer model
Authors: Liu Bichen , Huang Jun , Xiao Jiangming , Xu Wenlong , Zhang Hong , Yuan Yuan , Yin Yibing , Zhang Xuemei 
Published: November 2023

Abstract
Background
The efficacy of current surgery and chemotherapy for triple negative breast cancer (TNBC) is limited due to heterogenous and immunosuppressive tumor microenvironment (TME). Tumor associated macrophages (TAMs), which are regarded as an M2 tumor-promoting phenotype, are crucial in the development of the immunosuppressive TME. Targeting TAM reprograming is a promising strategy in anti-tumor therapy since reprogramming techniques provide the opportunity to actively enhance the antitumor immunological activity of TAM in addition to eliminating their tumor-supportive roles, which is rarely applied in TNBC clinically. However, how to drive M2 macrophages reprogramming into M1 with high potency remains a challenge and the molecular mechanisms how M2 macrophages polarized into M1 are poorly understood. Here, we identified a new immunoregulatory molecular PepO that was served as an immunoregulatory molecule governed the transformation of tumor-promoting M2 to tumor-inhibitory M1 cells and represented an effective anti-tumor property.

Results
At the present study, we identified a new immunoregulatory molecular PepO, as a harmless immunoregulatory molecule, governed the transformation of tumor-promoting M2 to tumor-inhibitory M1 cells efficiently. PepO-primed M2 macrophages decreased the expression of tumor-supportive molecules like Arg-1, Tgfb, Vegfa and IL-10, and increased the expression of iNOS, Cxcl9, Cxcl10, TNF-α and IL-6 to inhibit TNBC growth. Moreover, PepO enhanced the functions of macrophages related to cell killing, phagocytosis and nitric oxide biosynthetic process, thereby inhibiting the development of tumors in vivo and in vitro. Mechanistically, PepO reprogramed TAMs toward M1 by activating PI3K-AKT-mTOR pathway via TLR4 and suppressed the function of M2 by inhibiting JAK2-STAT3 pathway via TLR2. The PI3K inhibitor LY294002 abrogated the role of PepO in switching M2 macrophages into M1 and in inhibiting TNBC growth in vivo. And PepO failed to govern the M2 macrophages to reprogram into M1 macrophages and inhibit TNBC when TLR2 or TLR4 was deficient. Moreover, PepO enhanced the antitumor activity of doxorubicin and the combination exerted a synergistic effect on TNBC suppression.

Conclusions
Our research identified a possible macrophage-based TNBC immunotherapeutic approach and suggested a novel anticancer immunoregulatory molecular called PepO.
The current landscape of using direct inhibitors to target KRASG12C-mutated NSCLC
Authors: Batrash Firas , Kutmah Mahmoud , Zhang Jun 
Published: November 2023

AbstractMutation in KRAS protooncogene represents one of the most common genetic alterations in NSCLC and has posed a great therapeutic challenge over the past ~ 40 years since its discovery. However, the pioneer work from Shokat’s lab in 2013 has led to a recent wave of direct KRASG12C inhibitors that utilize the switch II pocket identified. Notably, two of the inhibitors have recently received US FDA approval for their use in the treatment of KRASG12C mutant NSCLC. Despite this success, there remains the challenge of combating the resistance that cell lines, xenografts, and patients have exhibited while treated with KRASG12C inhibitors. This review discusses the varying mechanisms of resistance that limit long-lasting effective treatment of those direct inhibitors and highlights several novel therapeutic approaches including a new class of KRASG12C (ON) inhibitors, combinational therapies across the same and different pathways, and combination with immunotherapy/chemotherapy as possible solutions to the pressing question of adaptive resistance.
The Tendency to Avoid Physical Activity and Sport Scale (TAPAS): Rasch analysis with differential item functioning testing among a Chinese sample
Authors: Fan Chia-Wei , Chang Yen-Ling , Huang Po-Ching , Fung Xavier C. C. , Chen Ji-Kang , Bevan Nadia , O’Brien Kerry S. , Yeh Ya-Chin , Chen Hsin-Pao , Chen I-Hua , Lin I-Ching , Griffiths Mark D. , Lin Chung-Ying 
Published: November 2023

Abstract
Background
The benefits of physical activity are well-known to prevent multiple long-term health conditions. Physical appearance and weight-related stigma may influence individuals’ decision to engage in physical activity and sport. Therefore, the present study examined the psychometric properties of a newly developed instrument, the Tendency to Avoid Physical Activity and Sport Scale (TAPAS), using modern test theory.

Methods
A total of 2319 university students were recruited from mainland China and they completed the TAPAS. Rasch analysis was used to examine the TAPAS’ rating scaling functioning, test unidimensionality, item hierarchy, ceiling and floor effects, and differential item functioning (DIF). Moreover, the concurrent validity of the TAPAS was examined using the Weight Self-Stigma Questionnaire (WSSQ), Weight Bias Internalization Scale (WBIS), and body mass index (BMI).

Results
Unidimensionality was confirmed except for one item. Items corresponding to attitude toward physical activity were more easily adopted compared to items corresponding to actual behavioral aspects. No ceiling and floor effects were found. No DIF existed in the TAPAS items. The TAPAS was strongly correlated with both the WSSQ and WBIS, but not BMI.

Conclusion
The study showed that overall, the TAPAS has robust psychometric properties. However, future research needs to address the misfit item and explore the feasibility of applying the TAPAS to other populations including wider ethnic groups, age ranges, and life stages.
Reduced graphene oxide coated alginate scaffolds: potential for cardiac patch application
Authors: Baheiraei Nafiseh , Razavi Mehdi , Ghahremanzadeh Ramin 
Published: November 2023

Abstract

Background
Cardiovascular diseases, particularly myocardial infarction (MI), are the leading cause of death worldwide and a major contributor to disability. Cardiac tissue engineering is a promising approach for preventing functional damage or improving cardiac function after MI. We aimed to introduce a novel electroactive cardiac patch based on reduced graphene oxide-coated alginate scaffolds due to the promising functional behavior of electroactive biomaterials to regulate cell proliferation, biocompatibility, and signal transition.

Methods
The fabrication of novel electroactive cardiac patches based on alginate (ALG) coated with different concentrations of reduced graphene oxide (rGO) using sodium hydrosulfite is described here. The prepared scaffolds were thoroughly tested for their physicochemical properties and cytocompatibility. ALG-rGO scaffolds were also tested for their antimicrobial and antioxidant properties. Subcutaneous implantation in mice was used to evaluate the scaffolds' ability to induce angiogenesis.

Results

The Young modulus of the scaffolds was increased by increasing the rGO concentration from 92 ± 4.51 kPa for ALG to 431 ± 4.89 kPa for ALG-rGO-4 (ALG coated with 0.3% w/v rGO). The scaffolds' tensile strength trended similarly. The electrical conductivity of coated scaffolds was calculated in the semi-conductive range (~ 10
−4
S/m). Furthermore, when compared to ALG scaffolds, human umbilical vein endothelial cells (HUVECs) cultured on ALG-rGO scaffolds demonstrated improved cell viability and adhesion. Upregulation of VEGFR2 expression at both the mRNA and protein levels confirmed that rGO coating significantly boosted the angiogenic capability of ALG against HUVECs. OD620 assay and FE-SEM observation demonstrated the antibacterial properties of electroactive scaffolds against
Escherichia coli
,
Staphylococcus aureus
, and
Streptococcus pyogenes
. We also showed that the prepared samples possessed antioxidant activity using a 2,2-diphenyl-1-picrylhydrazyl (DPPH) scavenging assay and UV–vis spectroscopy. Histological evaluations confirmed the enhanced vascularization properties of coated samples after subcutaneous implantation.

Conclusion
Our findings suggest that ALG-rGO is a promising scaffold for accelerating the repair of damaged heart tissue.

Graphical Abstract
Improved lower bound for the complexity of unique shortest vector problem
Authors: Jin Baolong , Xue Rui 
Published: November 2023

Abstract
Unique shortest vector problem (uSVP) plays an important role in lattice based cryptography. Many cryptographic schemes based their security on it. For the cofidence of those applications, it is essential to clarify the complexity of uSVP with different parameters. However, proving the NP-hardness of uSVP appears quite hard. To the state of the art, we are even not able to prove the NP-hardness of uSVP with constant parameters. In this work, we gave a lower bound for the hardness of uSVP with constant parameters, i.e. we proved that uSVP is at least as hard as gap shortest vector problem (GapSVP) with gap of $$O(\sqrt{n/\log (n)})$$

O
(

n
/
log
(
n
)

)

, which is in $$NP \cap coAM$$

N
P
∩
c
o
A
M

. Unlike previous works, our reduction works for paramters in a bigger range, especially when the constant hidden by the big-O in GapSVP is smaller than 1.

Graphical abstract
Suicides in National Hormone Pituitary Program Recipients of Cadaver-Derived Human Growth Hormone
Authors: Abrams Joseph Y , Mills James L , Schonberger Lawrence B , Chang David , Maddox Ryan A , Belay Ermias D , Leschek Ellen W 
Published: November 2023

Abstract

Context
Numerous reports of suicide among individuals who received cadaver-derived human growth hormone (c-hGH) through the National Hormone Pituitary Program (NHPP) raised the alarm for potentially increased suicide risk.

Objective
We conducted a study to assess suicide risk in the NHPP cohort and identify contributing factors to facilitate early recognition and intervention.

Methods
The study population consisted of patients receiving NHPP c-hGH starting from 1957, and cohort deaths with an ICD code consistent with suicide or possible suicide through 2020 were evaluated. Descriptive data were extracted from medical records. Standardized mortality ratios (SMRs) to compare the observed number of suicide deaths in the cohort to the expected number were calculated using general population suicide rates by sex, age group, and time period.

Results
Among 6272 patients there were 1200 all-cause cohort deaths, of which 55 (52 male, 3 female) were attributed to suicide. Of these, 47 were identified by ICD code alone compared to an expected count of 37.8 (SMR = 1.25, 95% CI 0.91-1.66). Among male cohort members, the SMR was 1.33 (95% CI 0.97-1.78). Elevated risk of suicide was detected for cohort members aged 25-34 (SMR = 1.79, 95% CI 1.06-2.83) and during the period from September 19, 1985, to December 31, 1998 (SMR = 1.70, 95% CI 1.02-2.65).

Conclusion
Overall, the observed number of suicides among NHPP c-hGH recipients was not significantly higher than expected. However, certain subgroups may be at elevated risk of suicide. Studies are needed to better understand the nature and magnitude of suicide risk among c-hGH recipients to facilitate early intervention to prevent suicide deaths.
Culture vultures: HIV/AIDS, structured disparities and stigma in Sindh province of Pakistan
Authors: Ali Inayat 
Published: November 2023

AbstractThe transmission rate of human immunodeficiency virus/acquired immunodeficiency syndrome (HIV/AIDS) is significantly increasing in Pakistan, which amounts to the second most rapid spread in Asia. In early 2019, the media reported on a HIV outbreak in the Taluka (sub-district) of Ratodero, located in the Larkana district of Pakistan’s Sindh province. In just one village, approximately 1,150 cases were diagnosed. Unfortunately, most of them were children. The outbreak, on the one hand, is a result of a conjuncture of local, national, and global economic and political inequalities. On the other hand, it is multiplying the adverse consequences for the economically and politically marginalized segments of society, such as children and women. This paper proposes strategies to address the outbreak and provides model questions for studying it. Outbreaks such as HIV pose a significant challenge to human existence. They require specific attention at different levels in order to be dealt with effectively. They require studies to examine the crucial role of sociocultural, economic and political factors in their origin and prevalence as well as the impact of sociocultural differences on the outcome.