bluuebunny/crossref_metadata_2025_split huggingface dataset:
History as capture
Authors: Hamid Sarah T. 
Published: December 2023

AbstractMyth, hype and industry-captured historiographies of AI, machine learning and computing depict the current moment as a unique and unprecedented confrontation with computational power, paying particular attention to the devastating effects this has on vulnerable communities (better: communities made vulnerable). But automated decision schemes are neither new nor newly urgent; they are the inheritance of almost seventy years of computing history, a history that has never not been entangled with state repression, genocidal and ecocidal violence and racialized expropriation. Carceralilty and artificial intelligence have a shared history, and the entanglements between them remain underappreciated by history writing on computing – despite the near-universal injunction to leverage history as a means to critique and counteract the cultural hegemony of computing. This paper examines some of the tensions underlying such calls for historical critique, calling into question the efficacy of such a project. I offer a study of the complex senses of history and development at work in the 2006 International Congress of Mathematics, discuss recent historiographies of computing (and science) from guild historians, and describe the ways academic history writing reproduces the same relations of dominance and campaigns of creation and conservation that scaffold mathematics and artificial intelligence.
Institutional Logics: Motivating Action and Overcoming Resistance to Change
Authors: Haveman Heather A. , Joseph-Goteiner David , Li Danyang 
Published: December 2023

AbstractInstitutional logics are interrelated sets of cultural elements (norms, values, beliefs, and symbols) that help people and organizations make sense of their everyday activities and order those activities in time and space. In this paper, we describe the rise of a robust literature on institutional logics, which mostly focuses on Western societies. We then describe changes in Chinese society and economy over the past four decades, as it shifted from state-controlled planning and redistribution to market-mediated exchange. We detail how the institutional logics that guide Chinese firms have been transformed in the wake of the economic transition. The state logic, which developed in the Maoist era, valorizes equality, national community, and political stability. Although it is still in evidence, it has been partly supplanted by a market logic that encourages efficiency, competition, and property rights. But this market logic differs from the one that prevails in Western capitalist economies. The Chinese version of the market logic valorizes the central role that the state and the Communist Party continue to play in economic life. Therefore, in the Chinese version of the market logic, efficiency, competition, and property rights are tempered by a continued concern for political stability. We review and summarize the existing literature on institutional logics and Chinese firms, and then identify fruitful lines that future research could take.
HOW TO EXTEND CLOSURE AND INTERIOR OPERATIONS TO MORE MODULES
Authors: EPSTEIN NEIL , R. G. REBECCA , VASSILEV JANET 
Published: December 2023

AbstractThere are several ways to convert a closure or interior operation to a different operation that has particular desirable properties. In this paper, we axiomatize three ways to do so, drawing on disparate examples from the literature, including tight closure, basically full closure, and various versions of integral closure. In doing so, we explore several such desirable properties, including hereditary, residual, and cofunctorial, and see how they interact with other properties such as the finitistic property.
Evolutionary Transitions in Individuality and Life Cycle Closure
Authors: Doulcier Guilhem , Takacs Peter , Bourrat Pierrick 
Published: December 2023

AbstractWe propose a novel account of evolutionary transitions in individuality as life cycle closure: that is, the emergence of a new embedding life cycle. To characterize this process, we show how the life trajectory of lower-level entities (e.g., cells) can be coarse-grained into classes of a higher-level entity. We argue that only higher-level entities displaying two necessary conditions for the existence of a life cycle (e.g., multicellular organisms) have achieved life cycle closure. Throughout, we illustrate our point with stage-structured demographic models that yield a rigorous characterization of the conditions for life cycle closure.
Minority Reports: Registering Dissent in Science
Authors: Dang Haixin 
Published: December 2023

AbstractConsensus reporting is valuable for presenting unified scientific evidence to the public. When a consensus does not exist, I argue that scientists ought not to default to majority reporting in its place. Majority reporting has several epistemic drawbacks because it can obscure underlying justifications and lines of evidence, which may be in conflict or contested. I argue that minority reporting, in conjunction with majority reporting, is an epistemically superior mechanism for scientists to report on the full range of reasons and evidence available within a group. This article addresses several objections, including worries over group cohesion, fringe reporting, and elite capture.
Limitations of precipitation reconstructions using equilibrium-line altitudes exemplified for former glaciers in the Southern Black Forest, Central Europe
Authors: Hofmann Felix Martin , Steiner Martin , Hergarten Stefan ,   ASTER Team, Preusser Frank 
Published: December 2023

Abstract
To further elucidate the Late Pleistocene glacial history of mid-elevation mountainous regions in Central Europe, 10Be cosmic-ray exposure (CRE) dating was applied to moraines in the Zastler Tal Valley in the Southern Black Forest. Periods of glacier recession from moraines in this valley began no later than 16 ka, 15 ka, and 13 ka. CRE ages of moraines in this and other parts of the Southern Black Forest cluster around 17–16 ka and 15–14 ka, thus suggesting a common forcing of glacier recession. Equilibrium-line altitudes (ELAs) during moraine formation were calculated for precipitation reconstruction. Observed spatial discrepancies in ELAs at ca. 15–14 ka are explained best by the size of snow-contributing areas. The reconstructed annual precipitation at the ELA for ca. 16 ka and ca. 15 ka is affected by large uncertainties, representing a wide range from ~50% to ~150% of present-day values. Due to various factors, such as drifting snow, the lower bounds of the estimates appear most realistic, thus concurring with the common hypothesis of less precipitation during the last glacial termination than today in Central Europe. Further research is needed before ELAs of small ice masses can be employed for precise precipitation estimates.
Why are international standards not set? Explaining “weak” cases in shadow banking regulation
Authors: James Scott , Quaglia Lucia 
Published: December 2023

AbstractWhy are international regulatory standards not set? While most of the literature focuses on explaining positive cases of standard-setting where international rules are agreed upon, weak or negative cases remain prevalent and yet surprisingly under-explored. To explain these cases in the area of financial services, we integrate an inter-state explanation, which focuses on competition between major jurisdictions, with a transgovernmental explanation, which relates to conflict between different regulatory bodies at the international level. We also consider how these dimensions interact with financial industry lobbying. This allows us to construct a typology differentiating between distinct types of cases concerning international standard-setting: (1) absent standards, (2) non-agreed standards, (3) symbolic standards, and (4) agreed standards. The explanatory leverage of our approach is illustrated through a systematic structured focused comparison of four post-crisis cases related to “shadow banking.” The article generates novel insights into regulatory conflicts and the scope conditions for international agreement.
The relevance of electrocardiogram filtering in the differential diagnosis of Brugada syndrome: An illustrative case report
Authors: Baena-Palomino Carlos , Castellano-Martínez Ana , Rodríguez-González Moisés 
Published: December 2023

AbstractWe present a clinical case of a teenager in whom a Brugada syndrome electrical pattern was found which was finally diagnosed as a Brugada phenocopy due to a wrong setup of the high-pass filter on the electrocardiogram
The Impact of Professional Training in Public and Policy Engagement
Authors: Tama Jordan , Rublee Maria Rost , Urban Kathryn 
Published: December 2023

ABSTRACTEngaging with audiences and communities beyond academia is now a common practice for political scientists. Yet, political scientists rarely are trained in how to conduct public or policy engagement, and we know little about the impact that training programs have on their preparedness to communicate with the public and policy makers. In this study, we evaluate whether professional training equips scholars with the skills needed to perform public and policy outreach. We find that a four-day training program generates remarkably large increases in the number of participants reporting that they possess high levels of knowledge, preparation, and confidence for public and policy engagement. This finding suggests that investments in public-engagement training by universities and the discipline of political science have the potential to significantly boost public outreach by faculty members.
Cost and affordability of healthy diets in Vietnam
Authors: Van Duong TT , Herforth Anna W , Trinh Huong T , Dao Binh TT , Do Ha TP , Talsma Elise F , Feskens Edith JM 
Published: December 2023

Abstract

Objectives:
To estimate the cost and affordability of healthy diets recommended by the 2016–2020 Vietnamese food-based dietary guidelines (FBDG).

Design:
Cross-sectional analysis. The Cost of a Healthy Diet (CoHD) indicator was used to estimate the lowest cost of healthy diets and compare the cost differences by food group, region and seasonality. The affordability of healthy diets was measured by further comparing the CoHD to food expenditures and incomes.

Setting:
Food prices of 176 food items from January 2016 to December 2020 were derived using data from monthly Consumer Price Index databases nationally and regionally.

Participants:
Food expenditures and incomes of participants from three latest Vietnam Household Living Standard Surveys were used.

Results:
The average CoHD between 2016 and 2020 in Vietnam was 3·08 international dollars using 2017 Purchasing Power Parity (24 070 Vietnamese Dongs). The nutrient-rich food groups, including protein-rich foods, vegetables, fruits and dairy, comprised approximately 80 % of the total CoHD in all regions, with dairy accounting for the largest proportion. Between 2016 and 2020, the cheapest form of a healthy diet was affordable for all high-income and upper-middle-income households but unaffordable for approximately 70 % of low-income households, where adherence to the Vietnamese FBDG can cost up to 70 % of their income.

Conclusions:
Interventions in local food systems must be implemented to reduce the cost of nutrient-rich foods to support the attainment of healthier diets in the Vietnamese population, especially for low-income households.
Untangling the Uncertainties in Plant Water Source Partitioning With Isotopes
Authors: Gai Haoqi , Shi Peijun , Li Zhi 
Published: December 2023

AbstractPlant water source partitioning suffers from multiple uncertainty sources including tracers, depleted xylem water deuterium, and mixing models, but the uncertainties have rarely been systematically evaluated. Taking apple trees of different ages as example, we combined four tracers of different characteristics (2H, 3H, 17O, and 18O), two xylem water deuterium bias correction methods (soil water excess and stem relative water content), and four mixing models (IsoSource, SIAR, MixSIR, and MixSIAR) to quantify the total uncertainty and the uncertainty of each component. For the total uncertainty, the contributions of the mixing models were the largest (37%), followed by those of tracers (28%) and interaction of tracers and models (27%), while the contributions of other sources were the smallest (8%). In particular, the xylem water deuterium bias correction methods had an uncertainty of 2%, implying its minor role in deviating plant water source partitioning. After evaluating the performance of the three components with four target functions, we recommend tracer combination of 2H18O with MixSIAR as the best framework for water source partitioning of apple trees on the Loess Plateau. The decomposed uncertainties and recommended methods provide technical support and promote understanding of variable results in plant water source partitioning.
A Tectonic Manifesto
Authors: Stern Robert , Gerya Taras , Tackley Paul 
Published: December 2023

AbstractTectonics is the scientific discipline that studies the relationship between planetary convection and surface deformation and magmatism. In recent years global tectonic regimes and planetary evolution have become foci of astronomical and planetological research dealing in particular with potential habitability of planets orbiting other stars in our galaxy (exoplanets). This broadens the scientific impact of “tectonics” and makes it useful to outline a few guiding principles. For many, the term “tectonics” is synonymous with Plate Tectonics on Earth, but it should not be limited to only the planet we know best. Specifically, the concept should be generalized to encompass other rocky planets and moons in our Solar System and exoplanets. This article summarizes 15 general concepts about how such bodies are expected to behave.
Revealing the Key Drivers Conducive to the “Once‐In‐A‐Century” 2021 Peninsular Malaysia Flood
Authors: Dong Luojie , Wang Jingyu , Zhi Xiefei , Park Edward , Wang Xianfeng , Yim Steve Hung‐Lam , Zhang Hugh , Lee Joshua , Tran Dung Duc 
Published: December 2023

AbstractIn December 2021, Super Typhoon Rai caused significant devastation to the South Philippines and East Malaysia. In the meantime, an unprecedented flood event occurred in Peninsular Malaysia at 2,000 km west of the typhoon's path, causing comparable socioeconomic impacts as Rai. Record‐breaking 3‐day precipitation was received by Peninsular Malaysia during 16–18 December. Based on the storm tracking results, this study identified two mesoscale convective systems (MCSs) that were directly responsible for the flooding. The two MCSs were directly initiated by a tropical depression and sustained by an elongated easterly water vapor corridor originating from the Super Typhoon Rai. The return period and joint frequency analysis of key drivers indicate that the 3‐day downpour was more severe than a “once‐in‐a‐century” event. Historical records suggest such anomalous moisture channel has become more frequent in Southeast Asia, which alarms heightened attention in forecasting winter flood.
Local Time Variations of Ionospheric F Layer Radial Current in Response to Enhanced Solar Wind Input
Authors: Zhong Yunfang , Wang Hui , Lühr Hermann , Zhang Kedeng , Xia Hao , Qian Chengyu , Wang Chengzhi , Sun Yu 
Published: December 2023

AbstractUsing Challenging Minisatellite Payload and the Republic of China Satellite‐1 observations, the response of ionospheric radial current (IRC) in the F region to the enhancement of merging electric field (Em) at different magnetic local times (MLT) is investigated. Possible physical mechanisms are discussed in terms of neutral wind, conductivity, and prompt penetration electric field (PPEF). The disturbance IRC (ΔIRC) increases in the upward (downward) direction in the daytime (nighttime) within 3 hr after Em enhancement. However, disturbance zonal winds increase westward (eastward) at 12–18 MLT (00–06 MLT). The reduced F region electron density may help weaken IRC at 06–12 MLT and 18–24 MLT. This work indicates that the daytime eastward (nighttime westward) PPEF drives equatorward (poleward) Hall current (JH) at low latitudes, resulting in both upward (downward) ΔIRC and eastward (westward) plasma drift at the F region magnetic equator.
Microbial underdogs: exploring the significance of low-abundance commensals in host-microbe interactions
Authors: Han Geongoo , Vaishnava Shipra 
Published: December 2023

AbstractOur understanding of host-microbe interactions has broadened through numerous studies over the past decades. However, most investigations primarily focus on the dominant members within ecosystems while neglecting low-abundance microorganisms. Moreover, laboratory animals usually do not have microorganisms beyond bacteria. The phenotypes observed in laboratory animals, including the immune system, have displayed notable discrepancies when compared to real-world observations due to the diverse microbial community in natural environments. Interestingly, recent studies have unveiled the beneficial roles played by low-abundance microorganisms. Despite their rarity, these keystone taxa play a pivotal role in shaping the microbial composition and fulfilling specific functions in the host. Consequently, understanding low-abundance microorganisms has become imperative to unravel true commensalism. In this review, we provide a comprehensive overview of important findings on how low-abundance commensal microorganisms, including low-abundance bacteria, fungi, archaea, and protozoa, interact with the host and contribute to host phenotypes, with emphasis on the immune system. Indeed, low-abundance microorganisms play vital roles in the development of the host’s immune system, influence disease status, and play a key role in shaping microbial communities in specific niches. Understanding the roles of low-abundance microbes is important and will lead to a better understanding of the true host-microbe relationships.
Disruption of cholesterol homeostasis triggers periodontal inflammation and alveolar bone loss
Authors: Tran Thanh-Tam , Lee Gyuseok , Huh Yun Hyun , Chung Ki-Ho , Lee Sun Young , Park Ka Hyon , Kwon Seung Hee , Kook Min-Suk , Chun Jang-Soo , Koh Jeong-Tae , Ryu Je-Hwang 
Published: December 2023

AbstractOral diseases exhibit a significant association with metabolic syndrome, including dyslipidemia. However, direct evidence supporting this relationship is lacking, and the involvement of cholesterol metabolism in the pathogenesis of periodontitis (PD) has yet to be determined. In this study, we showed that high cholesterol caused periodontal inflammation in mice. Cholesterol homeostasis in human gingival fibroblasts was disrupted by enhanced uptake through C-X-C motif chemokine ligand 16 (CXCL16), upregulation of cholesterol hydroxylase (CH25H), and the production of 25-hydroxycholesterol (an oxysterol metabolite of CH25H). Retinoid-related orphan receptor α (RORα) mediated the transcriptional upregulation of inflammatory mediators; consequently, PD pathogenesis mechanisms, including alveolar bone loss, were stimulated. Our collective data provided direct evidence that hyperlipidemia is a risk factor for PD and supported that inhibition of the CXCL16-CH25H-RORα axis is a potential treatment mechanism for PD as a systemic disorder manifestation.
Spatiotemporal characterization of glial cell activation in an Alzheimer’s disease model by spatially resolved transcriptomics
Authors: Choi Hongyoon , Lee Eun Ji , Shin Jin Seop , Kim Hyun , Bae Sungwoo , Choi Yoori , Lee Dong Soo 
Published: December 2023

AbstractThe molecular changes that occur with the progression of Alzheimer’s disease (AD) are well known, but an understanding of the spatiotemporal heterogeneity of changes in the brain is lacking. Here, we investigated the spatially resolved transcriptome in a 5XFAD AD model at different ages to understand regional changes at the molecular level. Spatially resolved transcriptomic data were obtained from 5XFAD AD models and age-matched control mice. Differentially expressed genes were identified using spots clustered by anatomical structures. Gene signatures of activation of microglia and astrocytes were calculated and mapped on the spatially resolved transcriptomic data. We identified early alterations in the white matter (WM) of the AD model before the definite accumulation of amyloid plaques in the gray matter (GM). Changes in the early stage of the disease involved primarily glial cell activation in the WM, whereas the changes in the later stage of pathology were prominent in the GM. We confirmed that disease-associated microglia (DAM) and astrocyte (DAA) signatures also showed initial changes in WM and that activation spreads to GM. Trajectory inference using microglial gene sets revealed the subdivision of DAMs with different spatial patterns. Taken together, these results help to understand the spatiotemporal changes associated with reactive glial cells as a major pathophysiological characteristic of AD. The heterogeneous spatial molecular changes apply to identifying diagnostic and therapeutic targets caused by amyloid accumulation in AD.
Precise base editing without unintended indels in human cells and mouse primary myoblasts
Authors: Yoon Da Eun , Kim Na-Rae , Park Soo-Ji , Jeong Tae Yeong , Eun Bokkee , Cho Yongcheol , Lim Soo-Yeon , Lee Hyunji , Seong Je Kyoung , Kim Kyoungmi 
Published: December 2023

AbstractBase editors are powerful tools for making precise single-nucleotide changes in the genome. However, they can lead to unintended insertions and deletions at the target sites, which is a significant limitation for clinical applications. In this study, we aimed to eliminate unwanted indels at the target sites caused by various evolved base editors. Accordingly, we applied dead Cas9 instead of nickase Cas9 in the base editors to induce accurate substitutions without indels. Additionally, we tested the use of chromatin-modulating peptides in the base editors to improve nucleotide conversion efficiency. We found that using both dead Cas9 and chromatin-modulating peptides in base editing improved the nucleotide substitution efficiency without unintended indel mutations at the desired target sites in human cell lines and mouse primary myoblasts. Furthermore, the proposed scheme had fewer off-target effects than conventional base editors at the DNA level. These results indicate that the suggested approach is promising for the development of more accurate and safer base editing techniques for use in clinical applications.