bluuebunny/crossref_metadata_2025_split huggingface dataset:
Validation of automated surveillance of healthcare-associated infections using electronic screening algorithms
Authors: Lee Hyunju , Ryu Seunghee , Yang Hyejin , Lee Jeongyoung , Park Soyeon , Kim Eun Ok , Jung Jiwon , Kima Sung-Han 
Published: September 2023

Background: Surveillance of healthcare-associated infection (HAI) is the basis of infection prevention programs. However, manual review of medical records is a labor-intensive and time-consuming process. We evaluated the diagnostic performance of automated surveillance of HAI using electronic screening algorithms. Methods: Between April and June 2022, we conducted surveillance of HAI manually and automatically using electronic screening algorithm on 75 units (general medical and surgical wards and ICUs) in a 2,700-bed, tertiary-care hospital in South Korea. Algorithms for surveillance of HAI were developed accordance with NHSN surveillance definitions (Fig. 1). Catheter-associated urinary tract infections (CAUTIs) were automatically detected when eligible pathogen and fever (>38°C) were matched within infection window period. Other specific types of infection were automatically classified based on laboratory results that met NHSN criteria. After the algorithm showed possible cases that met laboratory-confirmed bloodstream infection (LCBI) criteria, we excluded secondary BSIs using the automatic surveillance algorithm. We analyzed sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV) for the automated surveillance system compared to manual surveillance. Results: An algorithm for detecting CAUTI showed 98.7% sensitivity (78 of 79), 100.0% specificity (2,443 of 2,443), 100.0% PPV (78 of 78), and 100.0% NPV (2,443 of 2,444). For CLABSI, the algorithm had 97.3% sensitivity (214 of 220), 98.3% specificity (5,759 of 5,861), 67.7% PPV (214 of 316), and 99.9% NPV (5,759 of 5,765). In total, 102 cases of possible CLABSI were identified by the algorithm, and 76 (74.5%) were eventually diagnosed as secondary BSIs. Also, by chart review, 20 BSIs (19.6%) were present on arrival in ER (ER-POA). In 4 cases (3.9%), an original pathogen reoccurred in a repeated infection timeframe (RIT), and 2 cases (2%) were mucosal barrier injury-LCBI (MBI-LCBI). When we additionally performed manual surveillance for intra-abdominal infection secondary BSI, ER-POA, and assigning pathogen to original BSI in RIT, PPV increased to 87.7% (214 of 244). Conclusions: Algorithm for automated surveillance of CAUTI had good performance; however, automated surveillance of CLABSI was suboptimal. More elaborate screening algorithm for diagnosis CLABSI is needed, and further studies are needed to determine whether an automated surveillance system can reduce workload for surveillance of HAI.Disclosures: None
Risk factors for the transmission of Clostridioides difficile or methicillin-resistant Staphylococcus aureus in acute care
Authors: Wang Xuetao , Garrod Matthew , Duncombe Tamara , Lee Eunsun , Ng Katy Short Joyce 
Published: September 2023

Background: Some hospitals continue to struggle with nosocomial transmission of Clostridioides difficile infection (CDI) and methicillin-resistant Staphylococcus aureus (MRSA) despite years of infection control efforts. We investigated the relationship between unit infrastructural–organizational risk factors and nosocomial transmission of CDI and MRSA. Methods: This retrospective observational study included 100 eligible acute-care inpatient units from 12 hospitals in British Columbia, Canada, from April 1, 2020, to September 16, 2021. The outcome variables included whether a unit was on the CDI or MRSA vulnerable unit list (ie, defined as having ≥5 CDI cases or ≥6 MRSA cases being attributed to the unit in the last 6 fiscal periods), the average CDI/MRSA rate, as well as the average CDI/MRSA standardized infection ratio (SIR). Independent variables included, but were not limited to, infection control factors (eg hand hygiene rate), infrastructural factors (eg, unit age, total beds on unit), and organizational factors (eg, hallway bed utilization, nursing overtime). Multivariable regression was performed to identify statistically significant risk factors using SAS, R Studio, and Stata software. Results: For CDI, older units were associated with higher odds of being on the CDI vulnerable unit list (aOR, 1.086; 95% CI, 1.024–1.175), higher CDI rate (adjusted relative risk [aRR], 0.012; 95% CI, 0.004–0.020), and higher CDI SIR (aRR, 0.011; 95% CI, 0.003–0.020). Larger unit size was associated with higher odds of being on the CDI vulnerable unit list (aOR, 1.210; 95% CI, 1.095–1.400) and higher CDI SIR (aRR, 0.013; 95% CI, 0.001–0.026). For MRSA, an increase in hand hygiene rate was associated with lower odds of being on the MRSA vulnerable unit list (aOR, 0.71; 95% CI, 0.53–0.897), lower MRSA rate (aRR, −0.035; 95% CI, −0.063 to −0.008), and lower MRSA SIR (aRR, −0.039; 95% CI, −0.069 to −0.008). Higher MRSA bioburden was associated with higher odds of being on the MRSA vulnerable unit list (aOR, >999; 95% CI, >999 to >999), higher MRSA rate (aRR, 9.008; 95% CI, 5.586–12.429), and higher MRSA SIR (aRR, 4.964; 95% CI, 1.971–7.958). Additionally, higher MRSA rates were associated increased utilization of hallway beds (aRR, 0.680; 95% CI, 0.094–1.267), increased nursing overtime rate (aRR, 5.018; 95% CI, 1.210–8.826), and not having a clean supply room with the door consistently closed (aRR, −0.283; 95% CI, −0.536 to −0.03). Conclusions: Several infrastructural and organizational factors were associated with nosocomial transmissions of CDI and MRSA. Further research is needed to investigate the mechanisms by which these factors are associated.Disclosures: None
Validation of an electronic algorithm to identify appropriate antibiotic use for community-acquired pneumonia in children
Authors: Chiotos Kathleen , Grundmeier Robert , Meyahnwi Didien , Dutcher Lauren , Lautenbach Ebbing , Neuhauser Melinda , Hamilton Keith , Jaskowiak Anne , Cressman Leigh , Szymczak Julia , Muller Brandi , Gerbe Jeffrey 
Published: September 2023

Background: Community-acquired pneumonia (CAP) is a common indication for antibiotic use in hospitalized children and is a key target for pediatric antimicrobial stewardship programs (ASPs). Building upon prior work, we developed and refined an electronic algorithm to identify children hospitalized with CAP and to evaluate the appropriateness of initial antibiotic choice and duration. Methods: We performed a cross-sectional study including children 6 months to 17 years hospitalized for CAP between January 1, 2019, and October 31, 2022, at a tertiary-care children’s hospital. CAP was defined electronically as an International Classification of Disease, Tenth Revision (ICD-10) code for pneumonia, a chest radiograph or chest computed tomography scan (CT) performed within 48 hours of admission, and systemic antibiotics administered within the first 48 hours of hospitalization and continued for at least 2 days. We applied the following exclusion criteria: patients transferred from another healthcare setting, those who died within 48 hours of hospitalization, children with complex chronic conditions, and those with intensive care unit stays >48 hours. Criteria for appropriate antibiotic choice and duration were defined based on established guidelines. Two physicians performed independent medical record reviews of 80 randomly selected patients (10% sample) to evaluate the performance of the electronic algorithm in (1) identifying patients treated for clinician-diagnosed CAP and (2) classifying antibiotic choice and duration as appropriate. A third physician resolved discrepancies. The electronic algorithm was compared to this medical record review, which served as the reference standard. Results: Of 80 children identified by the electronic algorithm, 79 (99%) were diagnosed with CAP based on medical record review. Antibiotic use was classified as the appropriate choice in 75 (94%) of 80 cases, and appropriate duration in 16 (20%) of 80 cases. The sensitivity of the electronic algorithm for identifying appropriate initial antibiotic choice was 94%; specificity could not be calculated because no events of inappropriate antibiotic choice were identified based on chart review. The sensitivity and specificity for determining appropriate duration were 88% and 97%, respectively (Table 1).Conclusions: The electronic algorithm accurately identified children hospitalized with CAP and demonstrated acceptable performance for identifying appropriate antibiotic choice and duration. Use of this electronic algorithm may improve the efficiency of stewardship activities and could facilitate alignment with updated accreditation standards. Future studies validating this algorithm at other centers are needed.Disclosures: None
Proposing the “continuum of UTI” for a nuanced approach to antimicrobial stewardship
Authors: Advani Sonali , Turner Nicholas , North Rebecca , Moehring Rebekah , Nelson Alicia , Vaughn Valerie , Scales Charles , Siddiqui Nazema , Schmader Kenneth , Anderson Deverick 
Published: September 2023

Background: Historically, diagnosis of urinary tract infections (UTIs) has been divided into 3 categories based on symptoms and urine culture results: not UTI, asymptomatic bacteriuria (ASB), or UTI. However, some populations (eg, older adults, catheterized patients) may not present with signs or symptoms referrable to the urinary tract or have chronic lower urinary tract symptoms (LUTS), making the diagnosis of UTI challenging. We sought to understand the clinical presentation of patients who receive urine tests in a cohort of diverse hospitals. Methods: This retrospective descriptive cohort study included all adult noncatheterized inpatient and ED encounters with paired urinalysis and urine cultures (24 hours apart) from 5 community and academic hospitals in 3 states (NC, VA, GA) between January 1, 2017, and December 31, 2019. Trained abstractors collected clinical and demographic data using a 60-question REDCap survey. The study group met with multidisciplinary experts (ID, geriatrics, urology) to define the “continuum of UTI” (Table 1), which includes 2 new categories: (1) LUTS to capture patients with chronic lower urinary tract symptoms and (2) bacteriuria of unclear significance (BUS) to capture patients who do not clinically meet criteria for ASB or UTI (eg, older adults who present with delirium and bacteriuria). The newly defined categories were compared to current guideline-based categories. We further compared ASB, BUS, and UTI categories using a lower bacterial threshold of 1,000 colony-forming units. Results: In total, 220,531 encounters met study criteria. After using a random number generator and removing duplicates, 3,392 encounters were included. Based on current IDSA guidelines, the prevalence of ASB was 32.1% (n = 975), and prevalence of patients with “not UTI” was 1,614 (53%). Applying the expert panel’s new “continuum of UTI” definitions, the prevalence of “not UTI” patients decreased to 1,147 (37.7%), due to reassignment of 467 patients (15.3%)to LUTS. The prevalence of ASB decreased by 24% due to reassignment to BUS. Lowering the bacterial threshold had a slight impact on the number of definitive UTIs (14.9 vs 15.9%) (Table 1). Conclusions: Our rigorous review of laboratory and symptom data from a diverse population dataset revealed that diagnostic uncertainty exists when assessing patients with suspicion for UTI. We propose moving away from dichotomous approach of ASB versus UTI and using the “continuum of UTI” for stewardship conversations. This approach will allow us to develop nuanced deprescribing interventions for patients with LUTS or BUS (eg, watchful waiting, shorter course therapy) that account for the unique characteristics of these populations.Disclosures: None
Changes in US long-term care facility antibiotic prescribing, 2013–2021
Authors: Gouin Katryna , Creasy Stephen , Beckerson Mary , Wdowicki Marti , Hicks Lauri , Kabbani Sarah 
Published: September 2023

Background: Antibiotic use (AU) data are needed to improve prescribing in long-term care facilities (LTCFs). CMS requires AU tracking in LTCFs (effective 2017). Although most LTCFs have limited resources for AU tracking, LTCFs contract with LTCF pharmacies to dispense, monitor, and review medications. The objective of our analysis was to report LTCF antibiotic prescribing and characterize temporal changes from 2013 to 2021. Methods: We estimated annual systemic AU rates using prescription dispenses and resident census data from PharMerica, a LTCF-pharmacy services provider that covers ~20% of LTCFs nationwide, although the number of LTCFs and residents serviced by PharMerica varied over time (Fig. 1). We included LTCFs with ≥4 months of antibiotic dispensing and 12 months of census data. We identified courses by collapsing the same drug dispensed to the same resident within 3 days of the preceding end date. Course duration was calculated as the difference between the end and dispense dates. We reported yearly AU rates as courses per 1,000 residents and days of therapy (DOT) per 1,000 resident days from 2013 to 2021. We compared AU rates (percentage change) and antibiotic courses by class and agent (absolute percent difference) between 2013 and 2021. Results: From 2013 to 2021, AU course rates reported as antibiotic courses per 1,000 residents decreased (percentage change, −28%), with a notable increase in 2020 (Fig. 1). However, the median course duration remained the same (Table 1). The AU decline was mostly driven by decreases in fluoroquinolone courses (absolute difference, −10%, most commonly levofloxacin) and macrolide courses (−2%, most commonly azithromycin) (Figs. 2 and 3). Increases in cephalosporin courses (absolute difference, +7%, most commonly cephalexin) and tetracycline courses (+5%, most commonly doxycycline) were also observed (Figs. 2 and 3). During this period, AU DOT rates reported as DOT per 1,000 resident days decreased (percentage change, −13%) (Table 1). Conclusions: The LTCF AU rates, especially for fluoroquinolones, have decreased in recent years with associated shifts in the distribution of antibiotic classes. This finding may be due to CMS stewardship requirements and increased awareness of adverse events, including the FDA fluoroquinolone warnings. The observed increase in 2020 could be secondary to changes in prescribing practices and resident population during the COVID-19 pandemic. Opportunities to improve prescribing in LTCFs include optimizing treatment duration and leveraging LTCF-pharmacy resources to provide stewardship expertise and support AU tracking and reporting.Disclosures: None
Active surveillance and contact precautions for preventing MRSA healthcare-associated infections during the COVID-19 pandemic
Authors: McCauley Brian , Evans Martin , Simbartl Loretta , Jones Makoto , Roselle Gary , Harris Anthony , Perencevich Eli , Rubin Michael , Kralovic Stephen , Flarida Linda , Hicks Natalie 
Published: September 2023

Background: Statistically significant decreases in methicillin-resistant Staphylococcus aureus (MRSA) healthcare-associated infections (HAIs) occurred in Veterans Health Administration (VA) facilities from 2007 to 2019 using active surveillance for facility admissions and contact precautions for patients colonized (CPC) or infected (CPI) with MRSA, but the value of these interventions is controversial. Objective: To determine the impact of active surveillance, CPC, and CPI on prevention MRSA HAIs, we conducted a prospective cohort study between July 2020 and June 2022 in all 123 acute-care VA medical facilities. In April 2020, all facilities were given the option to suspend any combination of active surveillance, CPC, or CPI to free up laboratory resources for COVID-19 testing and conserve personal protective equipment. We measured MRSA HAIs (cases per 1,000 patient days) in intensive care units (ICUs) and non-ICUs by the infection control policy. Results: During the analysis period, there were 917,591 admissions, 5,225,174 patient days, and 568 MRSA HAIs. Only 20% of facilities continued all 3 MRSA infection control measures in July 2020, but this rate increased to 57% by June 2022. The MRSA HAI rate for all infection sites in non-ICUs was 0.07 (95% CI, 0.05–0.08) for facilities practicing active surveillance plus CPC plus CPI compared to 0.12 (95% CI, 0.08–0.19; P = .01) for those not practicing any of these strategies, and in ICUs the MRSA HAI rates were 0.20 (95% CI, 0.15–0.26) and 0.65 (95% CI, 0.41–0.98; P < .001) for the respective policies. Similar differences were seen when the analyses were restricted to MRSA bloodstream HAIs. Accounting for monthly COVID-19 admissions to facilities over the analysis period using a negative binomial regression model did not change the relationships between facility policy and MRSA HAI rates in the ICUs or non-ICUs. There was no statistically significant difference in monthly facility urinary catheter-associated infection rates, a nonequivalent dependent variable, in the categories during the analysis period in either ICUs or non-ICUs. Conclusions: In Veterans Affairs medical centers, there were fewer MRSA HAIs when facilities practiced active surveillance and contact precautions for colonized or infected patients during the COVID-19 pandemic. The effect was greater in ICUs than non-ICUs.Disclosures: None
There Is No Such Thing as Expected Moral Choice-Worthiness
Authors: Côté Nicolas 
Published: September 2023

AbstractThis paper presents some impossibility results for certain views about what you should do when you are uncertain about which moral theory is true. I show that under reasonable and extremely minimal ways of defining what a moral theory is, it follows that the concept of expected moral choiceworthiness is undefined, and more generally that any theory of decision-making under moral uncertainty must generate pathological results.
The emergence, implementation, and future growth of pharmacogenomics in psychiatry: a narrative review
Authors: Bousman Chad A. , Maruf Abdullah Al , Marques Diogo Ferri , Brown Lisa C. , Müller Daniel J. 
Published: September 2023

AbstractPsychotropic medication efficacy and tolerability are critical treatment issues faced by individuals with psychiatric disorders and their healthcare providers. For some people, it can take months to years of a trial-and-error process to identify a medication with the ideal efficacy and tolerability profile. Current strategies (e.g. clinical practice guidelines, treatment algorithms) for addressing this issue can be useful at the population level, but often fall short at the individual level. This is, in part, attributed to interindividual variation in genes that are involved in pharmacokinetic (i.e. absorption, distribution, metabolism, elimination) and pharmacodynamic (e.g. receptors, signaling pathways) processes that in large part, determine whether a medication will be efficacious or tolerable. A precision prescribing strategy know as pharmacogenomics (PGx) assesses these genomic variations, and uses it to inform selection and dosing of certain psychotropic medications. In this review, we describe the path that led to the emergence of PGx in psychiatry, the current evidence base and implementation status of PGx in the psychiatric clinic, and finally, the future growth potential of precision psychiatry via the convergence of the PGx-guided strategy with emerging technologies and approaches (i.e. pharmacoepigenomics, pharmacomicrobiomics, pharmacotranscriptomics, pharmacoproteomics, pharmacometabolomics) to personalize treatment of psychiatric disorders.
Properties of LoTs: The footprints or the bear itself?
Authors: McGrath Sam Whitman , Russin Jacob , Pavlick Ellie , Feiman Roman 
Published: September 2023

Abstract
There are two ways to understand any proposed properties of language-of-thoughts (LoTs): As diagnostic or constitutive. We argue that this choice is critical. If candidate properties are diagnostic, their homeostatic clustering requires explanation via an underlying homeostatic mechanism. If constitutive, there is no clustering, only the properties themselves. Whether deep neural networks (DNNs) are alternatives to LoTs or potential implementations turn on this choice.
Lower bounds on the maximal number of rational points on curves over finite fields
Authors: BERGSTRÖM JONAS , HOWE EVERETT W. , LORENZO GARCÍA ELISA , RITZENTHALER CHRISTOPHE 
Published: September 2023

AbstractFor a given genus
$g \geq 1$
, we give lower bounds for the maximal number of rational points on a smooth projective absolutely irreducible curve of genus g over
$\mathbb{F}_q$
. As a consequence of Katz–Sarnak theory, we first get for any given
$g>0$
, any
$\varepsilon>0$
and all q large enough, the existence of a curve of genus g over
$\mathbb{F}_q$
with at least
$1+q+ (2g-\varepsilon) \sqrt{q}$
rational points. Then using sums of powers of traces of Frobenius of hyperelliptic curves, we get a lower bound of the form
$1+q+1.71 \sqrt{q}$
valid for
$g \geq 3$
and odd
$q \geq 11$
. Finally, explicit constructions of towers of curves improve this result: We show that the bound
$1+q+4 \sqrt{q} -32$
is valid for all
$g\ge 2$
and for all q.
At the Epicentre of the COVID-19 Pandemic in Canada: Experiences and Recommendations of Family Care Partners of an Older Person Living in a Long-Term Care Home
Authors: Bourbonnais Anne , Lachance Geneviève , Baumbusch Jennifer , Hsu Amy , Daneau Stéphanie , Macaulay Susan 
Published: September 2023

AbstractThe roles of family care partners of older persons living in long-term care homes (LTCH) were severely disrupted during the coronavirus disease (COVID-19) pandemic. Our aim was to describe their experiences and to solicit their recommendations for supportive actions. We conducted a critical ethnography with 24 care partners who cared or had cared for an older person living in an LTCH in Québec during the COVID-19 pandemic. We collected data during interviews and used Spradley’s method to analyse them. Care partners experienced a forced separation from the older persons they cared for, which resulted in significant distress. Care, including post-mortem care, was considered inadequate and sometimes even inhumane. Communication was inconsistent, and this variability was also noted in visitation rules. Care partners perceived LTCHs as a neglected community. Supportive actions were recommended. The results illustrated the essential contribution of care partners, and the supportive actions they recommended must be a catalyst for change toward more humane care in LTCH settings.
Updating PAJID Scores for State Supreme Court Justices (1970–2019)
Authors: Hughes David A. , Wilhelm Teena , Wang Xuan 
Published: September 2023

AbstractWe build upon Brace, Langer, and Hall’s (2000, The Journal of Politics 62: 387–413) original measure of American state supreme court justice ideology – the PAJID scores. To do so, we gather new data on 1,666 state supreme court justices who served between 1970 and 2019 and update the PAJID scores throughout this period. Testing indicates that PAJID scores are a valid measure of state supreme court justices’ policy preferences and compare favorably, though less efficiently, to others such as Bonica and Woodruff (2015, The Journal of Law, Economics, and Organization 31: 472–98) and Windett, Harden, and Hall (2015, Political Analysis 23: 461–9). Given limited data availability for other ideological measures pre-1990 and post-2010, we conclude that these updated PAJID scores should prove attractive to scholars studying state courts during these periods and among those who desire additional state supreme court ideological data for robustness checks.