bluuebunny/crossref_metadata_2025_split huggingface dataset:
Microbiota from Alzheimer’s patients induce deficits in cognition and hippocampal neurogenesis
Authors: Grabrucker Stefanie , Marizzoni Moira , Silajdžić Edina , Lopizzo Nicola , Mombelli Elisa , Nicolas Sarah , Dohm-Hansen Sebastian , Scassellati Catia , Moretti Davide Vito , Rosa Melissa , Hoffmann Karina , Cryan John F , O’Leary Olivia F , English Jane A , Lavelle Aonghus , O’Neill Cora , Thuret Sandrine , Cattaneo Annamaria , Nolan Yvonne M 
Published: October 2023

Abstract
Alzheimer’s disease is a complex neurodegenerative disorder leading to a decline in cognitive function and mental health. Recent research has positioned the gut microbiota as an important susceptibility factor in Alzheimer’s disease by showing specific alterations in the gut microbiome composition of Alzheimer’s patients and in rodent models. However, it is unknown whether gut microbiota alterations are causal in the manifestation of Alzheimer’s symptoms.
To understand the involvement of Alzheimer’s patient gut microbiota in host physiology and behaviour, we transplanted faecal microbiota from Alzheimer’s patients and age-matched healthy controls into microbiota-depleted young adult rats.
We found impairments in behaviours reliant on adult hippocampal neurogenesis, an essential process for certain memory functions and mood, resulting from Alzheimer’s patient transplants. Notably, the severity of impairments correlated with clinical cognitive scores in donor patients. Discrete changes in the rat caecal and hippocampal metabolome were also evident. As hippocampal neurogenesis cannot be measured in living humans but is modulated by the circulatory systemic environment, we assessed the impact of the Alzheimer’s systemic environment on proxy neurogenesis readouts. Serum from Alzheimer’s patients decreased neurogenesis in human cells in vitro and were associated with cognitive scores and key microbial genera.
Our findings reveal for the first time, that Alzheimer’s symptoms can be transferred to a healthy young organism via the gut microbiota, confirming a causal role of gut microbiota in Alzheimer’s disease, and highlight hippocampal neurogenesis as a converging central cellular process regulating systemic circulatory and gut-mediated factors in Alzheimer’s.
Oral thermal processing in the gustatory cortex of awake mice
Authors: Bouaichi Cecilia G , Odegaard Katherine E , Neese Camden , Vincis Roberto 
Published: October 2023

Abstract
Oral temperature is a sensory cue relevant to food preference and nutrition. To understand how orally sourced thermal inputs are represented in the gustatory cortex (GC), we recorded neural responses from the GC of male and female mice presented with deionized water at different innocuous temperatures (14 °C, 25 °C, and 36 °C) and taste stimuli (room temperature). Our results demonstrate that GC neurons encode orally sourced thermal information in the absence of classical taste qualities at the single neuron and population levels, as confirmed through additional experiments comparing GC neuron responses to water and artificial saliva. Analysis of thermal-evoked responses showed broadly tuned neurons that responded to temperature in a mostly monotonic manner. Spatial location may play a minor role regarding thermosensory activity; aside from the most ventral GC, neurons reliably responded to and encoded thermal information across the dorso-ventral and antero-postero cortical axes. Additional analysis revealed that more than half of the GC neurons that encoded chemosensory taste stimuli also accurately discriminated thermal information, providing additional evidence of the GC’s involvement in processing thermosensory information important for ingestive behaviors. In terms of convergence, we found that GC neurons encoding information about both taste and temperature were broadly tuned and carried more information than taste-selective-only neurons; both groups encoded similar information about the palatability of stimuli. Altogether, our data reveal new details of the cortical code for the mammalian oral thermosensory system in behaving mice and pave the way for future investigations on GC functions and operational principles with respect to thermogustation.
Primary care physicians’ work conditions and their confidence in managing multimorbidity: a quantitative analysis using Job Demands–Resources Model
Authors: Zhao Ruixue , Zhang Jinnan , Li Mengyao , Loban Ekaterina , Nicolas Stephen , Martiland Elizabeth , Wang Wenhua 
Published: October 2023

Abstract

Background
Multimorbidity is a global issue that presents complex challenges for physicians, patients, and health systems. However, there is a lack of research on the factors that influence physicians’ confidence in managing multimorbidity within primary care settings, particularly regarding physicians’ work conditions.

Objectives
Drawing on the Job Demands–Resources Model, this study aims to investigate the level of confidence among Chinese primary care physicians in managing multimorbidity and examine the predictors related to their confidence.

Methods
Data were collected from 224 physicians working in 38 Community Healthcare Centres (CHCs) in Shanghai, Shenzhen, Tianjin, and Jinan, China. Work-family conflict (WFC) perceived organizational support (POS), self-directed learning (SDL), and burnout were measured. Physicians’ confidence was assessed using a single item. Mediation effect analysis was conducted using the Baron and Kenny method.

Results
The results showed that the mean confidence score for physicians managing multimorbidity was 3.63 out of 5, only 20.10% rating their confidence level as 5. WFC negatively related physicians’ confidence and POS positively related physicians’ confidence in multimorbid diagnosis and treatment. Burnout fully mediated the relationship between WFC and physicians’ confidence, and SDL partially mediated the relationship between POS and physicians’ confidence.

Conclusions
The confidence level of Chinese primary care physicians in managing multimorbidity needs improvement. To enhance physicians’ confidence in managing multimorbid patients, CHCs in China should address WFC and burnout and promote POS and SDL.
Emulation of seismic-phase traveltimes with machine learning
Authors: Anderson Gemma J , Myers Stephen C , Simmons Nathan 
Published: October 2023

SUMMARY
We present a machine learning (ML) method for emulating seismic-phase traveltimes that are computed using a global-scale 3-D earth model and physics-based ray tracing. Accurate traveltime predictions based on 3-D earth models are known to reduce the bias of event location estimates, increase our ability to assign phase labels to seismic detections and associate detections to events. However, practical use of 3-D models is challenged by slow computational speed and the unwieldiness of pre-computed lookup tables that are often large and have prescribed computational grids. In this work, we train a ML emulator using pre-computed traveltimes, resulting in a compact and computationally fast way to approximate traveltimes that are based on a 3-D earth model. Our model is trained using approximately 850 million P-wave traveltimes that are based on the global LLNL-G3D-JPS model, which was developed for more accurate event location. The training-set consists of traveltimes between 10 393 global seismic stations and randomly sampled event locations that provide a prescribed, distance-dependent geographic sample density for each station. Prediction accuracy is dependent on event-station distance and whether the station was included in the training set. For stations included in the training set the mean absolute deviation (MAD) of the difference between traveltimes computed using ray tracing through the 3-D model and the ML emulator for local, regional, and teleseismic distances are 0.090, 0.125 and 0.121 s, respectively. For tested station locations not included in the training set, MAD values for the three distance ranges increase to 0.173, 0.219 and 0.210 s, respectively. Empirical traveltime residuals for a global reference data are indistinguishable when ML emulation or the 3-D model is used to compute traveltimes. This result holds regardless of whether the recording station is used in ML training or not.
Health literacy among fathers and fathers-to-be: a multi-country, cross-sectional survey
Authors: Wynter Karen , Watkins Vanessa , Kavanagh Shane , Hosking Sarah , Rasmussen Bodil , Maindal Helle Terkildsen , Macdonald Jacqui 
Published: October 2023

Abstract
During pregnancy and early fatherhood, men are at higher risk of poor health, exacerbated by low engagement by healthcare services. Yet the transition to fatherhood presents an opportunity for men to improve their health and health behaviours. Health literacy refers to individuals’ competence in accessing and applying health information. Poor health literacy is associated with poor health and low help-seeking. The aim of this study was to identify health literacy strengths, needs and profiles among fathers. Men who were expecting a baby (‘antenatal’) or had become fathers in the past 18 months (‘postnatal’) were recruited through an international, online paid survey platform. The survey included the nine-scale Health Literacy Questionnaire (HLQ). Of 889 survey respondents (n = 416, 46.5% antenatal; n = 473, 53.5% postnatal), 274 (31.0%) were residing in the USA and 239 (27.0%) in the UK. Relatively higher scores were reported for HLQ scales relating to having sufficient information and finding and understanding this information, as well as social support for health. Relatively lower scores were obtained for scales relating to actively managing one’s own health and navigating the health care system. Three scale scores were significantly lower among nulliparous than multiparous men. Seven health literacy profiles were identified. In conclusion, while fathers have some health literacy strengths, they also experience some barriers, particularly first-time fathers. Awareness of diverse health literacy profiles among fathers may assist in developing strategies to strengthen health services’ capacity to meet fathers’ needs and reduce risks to their health at this critical juncture in families’ lives.
Genome sequencing revealed the red-flower trait candidate gene of a peach landrace
Authors: Zhou Ping , Lei Siru , Zhang Xiaodan , Wang Yinghao , Guo Rui , Yan Shaobin , Jin Guang , Zhang Xingtan 
Published: October 2023

Abstract
Peach (Prunus persica) is an economically important fruit crop globally and an excellent material for genomic studies. While considerable progress has been made in unveiling trait-associated genes within cultivars and wild relatives, certain novel genes controlling valuable traits in peach landraces, such as the red-flowering gene, remained unclear. In this study, we sequenced and assembled the diploid genome of the red-flower landrace ‘Yingzui’ (abbreviated as ‘RedY’). Multi-omics profiling of red petals of ‘RedY’ revealed the intensified red coloration associated with anthocyanins accumulation and concurrent decline in flavonols. This phenomenon is likely attributed to a natural variant of Flavonol Synthase (FLS) harboring a 9-bp exonic insertion. Intriguingly, the homozygous allelic configurations of this FLS variant were only observed in red-flowered peaches. Furthermore, the 9-bp sequence variation tightly associated with pink/red petal color in genome-wide association studies (GWAS) of collected peach germplasm resources. Functional analyses of the FLS variant, purified from procaryotic expression system, demonstrated its diminished enzymatic activity in flavonols biosynthesis, impeccably aligning with the cardinal trait of red flowers. Therefore, the natural FLS variant was proposed as the best candidate gene for red-flowering trait in peach. The pioneering unveiling of the red-flowered peach genome, coupled with the identification of the candidate gene, expanded the knowledge boundaries of the genetic basis of peach traits and provided valuable insights for future peach breeding efforts.
Who could be behind QAnon? Authorship attribution with supervised machine-learning
Authors: Cafiero Florian , Camps Jean-Baptiste 
Published: October 2023

Abstract
A series of social media posts on 4chan then 8chan, signed under the pseudonym ‘Q’, started a movement known as QAnon, which led some of its most radical supporters to violent and illegal actions. To identify the person(s) behind Q, we evaluate the coincidence between the linguistic properties of the texts written by Q and to those written by a list of suspects provided by journalistic investigation. To identify the authors of these posts, serious challenges have to be addressed. The ‘Q drops’ are very short texts, written in a way that constitute a sort of literary genre in itself, with very peculiar features of style. These texts might have been written by different authors, whose other writings are often hard to find. After an online ethnography of the movement, necessary to collect enough material written by these thirteen potential authors, we use supervised machine learning to build stylistic profiles for each of them. We then performed a ‘rolling analysis’, looking repeatedly through a moving window for parts of Q’s writings matching our profiles. We conclude that two different individuals, Paul F. and Ron W., are the closest match to Q’s linguistic signature, and they could have successively written Q’s texts. These potential authors are not high-ranked personality from the US administration, but rather social media activists.
Beam Effects on Atomic Dynamics in Metallic Glasses Studied With Electron Correlation Microscopy
Authors: Vaerst Olivia , Wilde Gerhard , Peterlechner Martin 
Published: October 2023

Abstract
Electron correlation microscopy (ECM) is used to investigate atomic dynamics in metallic glasses (MG) close to metastable equilibrium. It temporally correlates diffracted intensities of a time series of dark-field images to deduce a metric for structural decays. The measurement parameters, such as time and temperature, must be chosen according to the material of interest. In this work, ECM was extended to measurements at room temperature. To ensure, or select, a time window with quasi-thermodynamic equilibrium/steady-state measurement conditions, two-time correlation functions of diffracted intensities were calculated. The dynamics at room temperature are partly driven by the electron beam, thus affecting the material and the results. A systematic analysis of the influence of the electron beam is presented, revealing an inverse relation between electron dose rate and intensity correlation decay times at 300 kV acceleration voltage. However, the underlying dynamical mechanisms, described by a stretching exponent, are found to be independent of the applied electron dose rate for a Pd40Ni40P20 MG. An extrapolation of the results to infinite long measurement times and zero dose rate agrees with X-ray photon correlation spectroscopy data and justifies the application of beam-driven ECM at room temperature to study the dynamics of disordered systems.
Design of Electrostatic Aberration Correctors for Scanning Transmission Electron Microscopy
Authors: Ribet Stephanie M , Zeltmann Steven E , Bustillo Karen C , Dhall Rohan , Denes Peter , Minor Andrew M , dos Reis Roberto , Dravid Vinayak P , Ophus Colin 
Published: October 2023

Abstract
In a scanning transmission electron microscope (STEM), producing a high-resolution image generally requires an electron beam focused to the smallest point possible. However, the magnetic lenses used to focus the beam are unavoidably imperfect, introducing aberrations that limit resolution. Modern STEMs overcome this by using hardware aberration correctors comprised of many multipole elements, but these devices are complex, expensive, and can be difficult to tune. We demonstrate a design for an electrostatic phase plate that can act as an aberration corrector. The corrector is comprised of annular segments, each of which is an independent two-terminal device that can apply a constant or ramped phase shift to a portion of the electron beam. We show the improvement in image resolution using an electrostatic corrector. Engineering criteria impose that much of the beam within the probe-forming aperture be blocked by support bars, leading to large probe tails for the corrected probe that sample the specimen beyond the central lobe. We also show how this device can be used to create other STEM beam profiles such as vortex beams and probes with a high degree of phase diversity, which improve information transfer in ptychographic reconstructions.
ZAFG Method for Quantitative Characterization of Spherical Particles: Deriving a Universal Equation for Geometrical Correction
Authors: Bayazid Seyed Mahmoud , Brodusch Nicolas , Dumaresq Nicolas , Gauvin Raynald 
Published: October 2023

Abstract
This study introduces a universal equation to calculate the geometrical correction factor (G) as the fourth factor in the conventional ZAF method for quantifying spherical particles (specifically, NIST-K411 glass microspheres mounted on bulk carbon substrate). Note that the fluorescence correction factor (F) is not considered in this study. Our findings demonstrate that the G factor, as a function of the particle diameter (D) and the range of emitted X-rays in a bulk sample (Xe), provides the best model. Xe depends on the chemical composition and accelerating voltage. We observed excellent agreement between the G factor predicted by our model and experimental data obtained from NIST-K411 standard particles. Our results show that when Xe is greater than D, the G factor decays exponentially, independent of the incident electron energy, X-ray lines, and chemical composition of the particles. We also found that when DXe &gt; 1, the particle behaves as a bulk sample, and G = 1. Notably, our data indicate that the G factor depends only on DXe, not on the chemical composition or beam energy.
Chromobacterium violaceum in a U.S. Marine: A Case Report
Authors: Attonito John , Tomasello Giacomo , Barrett Brendan , Wauters Robert , Adams Ashley , Gilbert Laura 
Published: October 2023

ABSTRACT
Chromobacterium violaceum is associated with severe sepsis leading to cutaneous and visceral organ abscesses, with mortality rates up to 73%. Around 200 cases of C. violaceum infection have been reported globally. We report a case of a 27-year-old female U.S. Marine recruit who presented with fever, chills, myalgias, arthralgias, headache, and nodules on her extremities. Physical examination revealed multiple small skin abscesses on her extremities. Abdominal imaging with contrast revealed large liver abscesses requiring drainage. Both blood and wound cultures grew C. violaceum. The patient was successfully treated with meropenem and ciprofloxacin. At 3 months, symptoms had resolved, and labs and imaging were normal. Though rare, C. violaceum infection rates are increasing. Severe infection develops rapidly and invasive disease is not uncommon. Early detection and appropriate antibiotic treatment are key in preventing mortality.
Ethical Issues Regarding Neurosurgical Management of Penetrating Brain Injury in the French Armed Forces
Authors: Fawaz Rayan , Fouet Mathilde , Brenot Godefroi , Bertani Antoine , Lamblin Antoine , Delmas Jean-Marc 
Published: October 2023

ABSTRACT
Combat penetrating brain injury (PBI) differs significantly from PBI in civilian environments. Differences include technical factors such as the weapons involved, strained resource environments, and limited medical materials and human resources available. Ethical issues regarding the management of PBI in military settings may occur. This case study examines the case of a 20-year-old member of the French Armed Forces that suffered a penetrating brain injury in a combat situation. The four-quadrant method along with the four principles of medical ethics (respect for autonomy, beneficence, nonmaleficence, and justice) was used to analyze this case and to apply ethics to the practice of military medicine. Nowadays, we possess the medical and surgical resources as well as the aeromedical evacuation capability to save the life of a soldier with a penetrating craniocerebral wound. Nonetheless, the functional outcome of this type of wound places military doctors in an ethical dilemma. The line of conduct and clinical protocol established by the French Medical Health Service is to manage all PBIs when the patient’s life can be saved and to provide all available financial and social support for the rehabilitation of patients and their family.
Maternal and Neonatal Outcomes of Adolescent Pregnancies in the Military Health System
Authors: Ahmed Saira , Vereen Rasheda J , Aden James K , Dillon Christopher A , Shapiro Jonathan B 
Published: October 2023

ABSTRACT

Objective
To determine if universal access to care for military beneficiaries improves timing of presentation to prenatal care (PNC) in adolescent and young adult (AYA) pregnancies, improving maternal and neonatal outcomes.

Study Design
Retrospective descriptive cohort study, which assessed PNC initiation in eligible military beneficiaries: dependent daughters, active-duty women, and active-duty spouses aged 13 to 26 between January 2015 and December 2019, and subsequent adverse maternal and neonatal outcomes.

Results
The cohort included 4,557 eligible pregnancies and 4,044 mothers aged 13 to 26. Late entry to PNC was not associated with gestational diabetes, prolonged rupture of membranes, pregnancy loss, elective abortion, substance use, or premature labor. Younger age was significantly associated with substance use, elective abortion, and sexually transmitted infection. There were 2,107 eligible newborns. There was no significant difference in gestational age at birth, incidence of prematurity, birthweight percentile, or occurrence of a neonatal intensive care unit admission based on maternal age. In comparison to published national outcomes, there was a significantly smaller occurrence of preterm (5.3% vs. 9.57-10.23%, 95% CI, 4.4-6.4%), small for gestational age (5.2% vs. 10-13%, 95% CI, 4.3-6.2%), and large for gestational age (4.8% vs. 9%, 95% CI, 4.0-5.8%) births, but a higher occurrence of neonatal intensive care unit admissions (16.9% vs. 7.8-14.4%, 95% CI, 15.4-18.6%) in infants born to military beneficiaries.

Conclusions
Our findings suggest that expanded universal access to health care may improve AYA pregnancy and delivery outcomes. Infants born to AYA military beneficiaries have improved neonatal outcomes compared to nationally published data. These results may correlate to improved maternal access within a free or low-cost healthcare system.