bluuebunny/crossref_metadata_2025_split huggingface dataset:
Contribution of circulating monocytes in maintaining homeostasis of resident macrophages in postnatal and young adult mouse cochlea
Authors: Miwa Toru , Rengasamy Gowshika , Liu Zhaoyuan , Ginhoux Florent , Okano Takayuki 
Published: January 2024

AbstractThe percentage of macrophage subpopulations based on their origins in the adult cochlea remains unclear. This study aimed to elucidate the origins of cochlear macrophages during the onset phase and development of auditory function. We used three types of mice: wildtype ICR mice, colony-stimulating factor 1 receptor (Csf1r)-deficient mice, and Ms4a3Cre-Rosa tdTomato (Ms4a3tdT) transgenic mice. Macrophages were labeled with ionized calcium-binding adapter molecule 1 (Iba1), which is specific to more mature macrophages, and CD11b, which is specific to monocyte lineage. We investigated the spatial and temporal distribution patterns of resident macrophages in the cochlea during the postnatal and early adult stages. During the adult stages, the rate of monocytes recruited from the systemic circulation increased; moreover, Iba1+/CD11b− cochlear macrophages gradually decreased with age. Fate mapping of monocytes using Ms4a3tdT transgenic mice revealed an increased proportion of bone marrow-derived cochlear macrophages in the adult stage. Contrastingly, the proportion of yolk sac- and fetal liver-derived tissue-resident macrophages decreased steadily with age. This heterogeneity could be attributed to differences in environmental niches within the tissue or at the sub-tissue levels. Future studies should investigate the role of cochlear macrophages in homeostasis, inflammation, and other diseases, including infection, autoimmune, and metabolic diseases.
Interactions between the AraC/XylS-like transcriptional activator InvF of Salmonella Typhimurium, the RNA polymerase alpha subunit and the chaperone SicA
Authors: Cortés-Avalos Daniel , Borges Farias André , Romero-González Luis E. , Lara-Ochoa Cristina , Villa-Tanaca Lourdes , García-del Portillo Francisco , López-Guerrero Vanessa , Bustamante Víctor H. , Pérez-Rueda Ernesto , Ibarra J. Antonio 
Published: January 2024

AbstractSalmonella enterica serovar Typhimurium causes gastroenteritis and systemic infections in humans. For this bacterium the expression of a type III secretion system (T3SS) and effector proteins encoded in the Salmonella pathogenicity island-1 (SPI-1), is keystone for the virulence of this bacterium. Expression of these is controlled by a regulatory cascade starting with the transcriptional regulators HilD, HilC and RtsA that induce the expression of HilA, which then activates expression of the regulator InvF, a transcriptional regulator of the AraC/XylS family. InvF needs to interact with the chaperone SicA to activate transcription of SPI-1 genes including sicA, sopB, sptP, sopE, sopE2, and STM1239. InvF very likely acts as a classical activator; however, whether InvF interacts with the RNA polymerase alpha subunit RpoA has not been determined. Results from this study confirm the interaction between InvF with SicA and reveal that both proteins interact with the RNAP alpha subunit. Thus, our study further supports that the InvF/SicA complex acts as a classical activator. Additionally, we showed for the first time an interaction between a chaperone of T3SS effectors (SicA) and the RNAP.
Verification study on how macrofungal fruitbody formation can be predicted by artificial neural network
Authors: Somfalvi-Tóth Katalin , Jócsák Ildikó , Pál-Fám Ferenc 
Published: January 2024

AbstractThe occurrence and regularity of macrofungal fruitbody formation are influenced by meteorological conditions; however, there is a scarcity of data about the use of machine-learning techniques to estimate their occurrence based on meteorological indicators. Therefore, we employed an artificial neural network (ANN) to forecast fruitbody occurrence in mycorrhizal species of Russula and Amanita, utilizing meteorological factors and validating the accuracy of the forecast of fruitbody formation. Fungal data were collected from two locations in Western Hungary between 2015 and 2020. The ANN was the commonly used algorithm for classification problems: feed-forward multilayer perceptrons with a backpropagation algorithm to estimate the binary (Yes/No) classification of fruitbody appearance in natural and undisturbed forests. The verification indices resulted in two outcomes: however, development is most often studied by genus level, we established a more successful, new model per species. Furthermore, the algorithm is able to successfully estimate fruitbody formations with medium to high accuracy (60–80%). Therefore, this work was the first to reliably utilise the ANN approach of estimating fruitbody occurrence based on meteorological parameters of mycorrhizal specified with an extended vegetation period. These findings can assist in field mycological investigations that utilize sporocarp occurrences to ascertain species abundance.
DFT study, and natural bond orbital (NBO) population analysis of 2-(2-Hydroxyphenyl)-1-azaazulene tautomers and their mercapto analouges
Authors: Halim Shimaa Abdel , El-Meligy Asmaa B. , El-Nahas Ahmed M. , El-Demerdash Safinaz H. 
Published: January 2024

AbstractTheoretical research on the keto-enol tautomerization of 2-(2-Hydroxyphenyl)-1-aza azulene (2HPhAZ) and its thiol-thione (2MPhAZ) analouge has been performed using the density functional B3LYP method with the 6–311 +  + G(2d,2p) basis set in gas and ethanol phases. The findings of the MO computation on the energy scale and the prediction of the frontier molecular orbital (FMO) energies demonstrate that the tautomeric structures exist in a static mixture in the ground state, with the enol and thiol structure being more stable than the keto and thione structures in gas phase. The ethanol solvent causes some reordering of the relative stability of 2HPhAZ and 2MPhAZ conformers. The geometries created at the B3LYP/6–311 +  + G(2d,2p) level of theory were used for NBO analysis. In the tautomerization of 2HPhAZ and its mercapto analogue 2-(2-Mercaptophenyl)-1-azaazulene (2MPhAZ), it has been found that the O(S)-C sigma bond is weak due to nO(S)—> σ*C25-O26(S26) and nO(S)—> σ*C15-N16 delocalization. It is also noted that the resulting p character of the corresponding oxygen (sulfur) natural hybrid orbital (NHO) of σO(S)-C bond orbital is related to the decreased occupancy of the localized σO(S)-C orbital in the idealized Lewis structure or the increased occupancy of σ*O(S)-C of the non-Lewis orbital and their subsequent impact on molecular stability and geometry (bond lengths) in gas phase and ethanol. Additionally, the energy of charge transfer decreases as the potential rotamers' Hammett constants (R1–R3 for O(S) atoms) increase. The partial charge distribution on the skeleton atoms demonstrates that the intra- and intermolecular interactions can be significantly influenced by the electrostatic attraction or repulsion between atoms. Lastly, the currently applied NBO-based HB strength indicator enables a fair prediction of the frequency of the proton donor NH stretching mode, but this simple picture is hidden by abundant hype conjugative effects.
Comparison of the differentiation of ovine fetal bone-marrow mesenchymal stem cells towards osteocytes on chitosan/alginate/CuO-NPs and chitosan/alginate/FeO-NPs scaffolds
Authors: Soltani Leila , Varmira Kambiz , Nazari Maryam 
Published: January 2024

AbstractIn the current study, the creation of a chitosan/alginate scaffold hydrogel with and without FeO-NPs or CuO-NPs was studied. From fetal ovine bone marrow mesenchymal stem cells (BM-MSCs) were isolated and cultivated. Their differentiation into osteocyte and adipose cells was investigated. Also, on the scaffolds, cytotoxicity and apoptosis were studied. To investigate the differentiation, treatment groups include: (1) BM-MSCs were plated in DMEM culture medium with high glucose containing 10% FBS and antibiotics (negative control); (2) BM-MSCs were plated in osteogenic differentiation medium (positive control); (3) positive control group + FeO-NPs, (4) positive control group + CuO-NPs; (5) BM-MSCs were plated in osteogenic differentiation medium on chitosan/alginate scaffold; (6) BM-MSCs were plated in osteogenic differentiation medium on chitosan/alginate/FeO-NPs scaffold; and (7) BM-MSCs were plated in osteogenic differentiation medium on chitosan/alginate/CuO-NPs scaffold. Alkaline phosphatase enzyme concentrations, mineralization rate using a calcium kit, and mineralization measurement by alizarin staining quantification were evaluated after 21 days of culture. In addition, qRT-PCR was used to assess the expression of the ALP, ColA, and Runx2 genes. When compared to other treatment groups, the addition of CuO-NPs in the chitosan/alginate hydrogel significantly increased the expression of the ColA and Runx2 genes (p < 0.05). However, there was no significant difference between the chitosan/alginate hydrogel groups containing FeO-NPs and CuO-NPs in the expression of the ALP gene. It appears that the addition of nanoparticles, in particular CuO-NPs, has made the chitosan/alginate scaffold more effective in supporting osteocyte differentiation.
Integrated approach to water resource management in Mashhad Plain, Iran: actor analysis, cognitive mapping, and roadmap development
Authors: Kolahi Mahdi , Davary Kamran , Omranian Khorasani Hamid 
Published: January 2024

AbstractIran's Mashhad Plain faces a severe water crisis due to the excessive exploitation of groundwater, leading to the depletion of its aquifer. While water demand management is recognized as a superior solution compared to supply projects, its implementation presents notable challenges. This study addresses the urgent necessity to curtail water demand in the Mashhad Plain by alleviating conflicts among various stakeholders, including water resource managers and consumers. Initially, the research identifies key water resource actors who collaborate in devising a comprehensive roadmap and conceptual model for efficient water resource management. An analysis uncovers significant conflicts among actors, representing approximately 6% of identified issues, with minor conflicts in 30% of cases. Encouragingly, stakeholders demonstrate potential for consensus on the remaining conflict items, with specific actors emerging as pivotal in conflict resolution. Efficient water resource management in regions facing scarcity, diverse interests, and sustainability challenges demands a multifaceted strategy. Future endeavors involve developing a dynamic system model to simulate policy impacts and strengthen conflict resolution efforts. This research introduces a roadmap-driven approach aimed at resolving conflicts and implementing water demand management in the Mashhad Plain. It emphasizes the critical need to address water scarcity challenges while effectively mitigating conflicts among water resource stakeholders.
Quercetin stimulates trophoblast fusion via the mitochondrial function
Authors: Yoshida Kanoko , Kusama Kazuya , Shinohara Go , Sato Shiho , Yoshie Mikihiro , Tamura Kazuhiro 
Published: January 2024

AbstractThe fusion of mononuclear trophoblasts into multinucleate syncytiotrophoblasts is the critical event in the process of syncytialization, and its dysregulation can lead to pregnancy complications, notably hypertensive disorders of pregnancy (HDP). Oxidative stress may disrupt trophoblast syncytialization in HDP. Specifically, placentas with HDP exhibit impaired mitochondria, giving rise to the generation of reactive oxygen species (ROS) and subsequent oxidative stress. Quercetin, a bioflavonoid known for its antioxidant and anti-aging properties, has the potential to mitigate oxidative stress during trophoblast syncytialization. However, the precise mechanism underlying the action of quercetin in these processes remains to be elucidated. To explore the impact of quercetin on syncytialization, mitochondrial function, and ROS generation, cyclic AMP-stimulated BeWo cells were treated with quercetin. The expression of markers associated with cell fusion, mitochondrial function, and oxidative stress was determined using qPCR and western blotting. Additionally, morphological syncytialization and mitophagy (mitochondrial degradation) were assessed by immunofluorescence analysis. Our results revealed that quercetin increased the expression of syncytialization markers and promoted cell fusion. Furthermore, this compound also upregulated markers associated with mitophagy and mitochondrial fusion, which are corroborated by visual evidence of mitophagy through the fluorescence microscope. Cell fusion naturally stimulated ROS generation, which was attenuated by quercetin. Quercetin downregulated the expression of NRF2 and HO-1 during syncytialization, while increasing the expression of sirtuin1/3/6, which are known to play essential roles in antioxidant responses. In conclusion, quercetin effectively regulates mitochondrial function through its antioxidant properties and the suppression of ROS generation, ultimately promoting trophoblast fusion, suggesting that the flavonoid has the potential to ameliorate pregnancy-related disorder stemming from placental dysplasia.
Production of an eco-friendly concrete by including high-volume zeolitic supplementary cementitious materials and quicklime
Authors: Vaičiukynienė Danutė , Nizevičienė Dalia , Kantautas Aras , Tamošaitis Gintautas , Fornés Ignacio Villalón , Krivenko Pavel , Boiko Olha 
Published: January 2024

AbstractThe production of ordinary Portland cement (OPC) is one of the main global causes of CO2 release to the atmosphere. However, its availability and unique characteristics as a binding material make it difficult to be substituted by eco-friendlier materials. However, OPC partial replacement with pozzolanic materials is one of the best solutions to this problem. Hence, in this study, various types of high-volume zeolite were employed as supplementary cementitious materials (SCM), substituting the OPC by up to 50 wt.% in the composition of the created mortars. Besides, quicklime and inorganic accelerators were included in some of the mortar mixtures to improve the hydration reaction and enhance its speed. The mechanical, durability and durability in sea water properties were investigated. Although the usage of SCM caused a decrease in the mechanical and durability properties of the specimens, the addition of 10 wt.% quicklime palliated this degradation by enhancing by 40% the 28-days compressive strength of the specimens and by significantly improving their durability (porosity, freeze–thaw resistance and carbonation resistance). Moreover, the mixtures were proved to be resistance to aggressive ionic environments, since their compressive strength even increased after 28-day immersion in seawater, due to the additional formation of hydration compounds.
Notch intracellular domains form transcriptionally active heterodimeric complexes on sequence-paired sites
Authors: Gazdik Tana R. , Crow Jacob J. , Lawton Tyler , Munroe Chloe J. , Theriault Hannah , Wood Travis M. , Albig Allan R. 
Published: January 2024

AbstractNotch signaling is universally conserved in metazoans where it is important for a wide variety of both normal and abnormal physiology. All four mammalian Notch receptors are activated by a conserved mechanism that releases Notch intracellular domains (NICDs) from the plasma membrane to translocate to the nucleus. Once there, NICDs interact through highly conserved ankyrin domains to form head-to-head homodimers on Notch sensitive promoters and stimulate transcription. Due to the highly conserved nature of these Notch ankyrin domains in all four mammalian Notch proteins, we hypothesized that NICDs may also engage in heterodimerization. Our results reveal the presence of two NICD dimerization states that can both engage in homo and heterodimerization. Using a Co-IP approach, we show that all NICD’s can form non-transcriptionally active dimers and that the N4ICD appears to perform this function better than the other NICDs. Using a combination of ChIP analysis and transcriptional reporter assays, we also demonstrate the formation of transcriptionally active heterodimers that form on DNA. In particular, we demonstrate heterodimerization between the N2ICD and N4ICD and show that this heterodimer pair appears to exhibit differential activity on various Notch sensitive promoters. These results illustrate a new diversification of Notch signaling mechanisms which will help us better understand basic Notch function.
Enhanced electrical properties of amorphous In-Sn-Zn oxides through heterostructuring with Bi2Se3 topological insulators
Authors: Wang Chih-Chiang , Lo An-Ya , Cheng Ming-Che , Chang Yu-Sung , Shih Han-Chang , Shieu Fuh-Sheng , Tseng Tzu-Hsien , Tsai He-Ting 
Published: January 2024

AbstractAmorphous indium tin zinc oxide (a-ITZO)/Bi2Se3 nanoplatelets (NPs) were fabricated using a two-step procedure. First, Bi2Se3 NPs were synthesized through thermal chemical vapor deposition at 600 °C on a glass substrate, and then a-ITZO was deposited on the surface of the Bi2Se3 NPs via magnetron sputtering at room-temperature. The crystal structures of the a-ITZO/Bi2Se3 NPs were determined via X-ray diffraction spectroscopy and high-resolution transmission electron microscopy. The elemental vibration modes and binding energies were measured using Raman spectroscopy and X-ray photoelectron spectroscopy. The morphologies were examined using field-emission scanning electron microscopy. The electrical properties of the a-ITZO/Bi2Se3 NPs were evaluated using Hall effect measurements. The bulk carrier concentration of a-ITZO was not affected by the heterostructure with Bi2Se3. In the case of the Bi2Se3 heterostructure, the carrier mobility and conductivity of a-ITZO were increased by 263.6% and 281.4%, respectively, whereas the resistivity of a-ITZO was reduced by 73.57%. This indicates that Bi2Se3 significantly improves the electrical properties of a-ITZO through its heterostructure, expanding its potential applications in electronic and thermoelectric devices.
A machine learning-based classification model to support university students with dyslexia with personalized tools and strategies
Authors: Zingoni Andrea , Taborri Juri , Calabrò Giuseppe 
Published: January 2024

AbstractDyslexia is a specific learning disorder that causes issues related to reading, which affects around 10% of the worldwide population. This can compromise comprehension and memorization skills, and result in anxiety and lack of self-esteem, if no support is provided. Moreover, this support should be highly personalized, to be actually helpful. In this paper, a model to classify the most useful methodologies to support students with dyslexia has been created, with a focus on university alumni. The prediction algorithm is based on supervised machine learning techniques; starting from the issues that dyslexic students experience during their career, it is capable of suggesting customized support digital tools and learning strategies for each of them. The algorithm was trained and tested on data acquired through a self-evaluation questionnaire, which was designed and then spread to more than 1200 university students. It allowed 17 useful tools and 22 useful strategies to be detected. The results of the testing showed an average prediction accuracy higher than 90%, which rises to 94% by renouncing to guess the less-predictable 8 tools/strategies. In the light of this, it is possible to state that the implemented algorithm can achieve the set goal and, thus, reduce the gap between dyslexic and non-dyslexic students. This achievement paves the way for a new modality of facing the problem of dyslexia by university institutions, which aims at modifying teaching activities toward students’ needs, instead of simply reducing their study load or duties. This complies with the definition and the aims of inclusivity.
Passenger muscle responses in emergency braking events with reclined seating
Authors: Ren Lihai , Kang Yuze , Tan Zheng , Jiang Chengyue , Hu Yuanzhi 
Published: January 2024

AbstractEmergency braking can generate forward displacement that may influence the effectiveness of protection in collisions, especially for passengers. The development of automated vehicles has enabled the diversification and rationalization of sitting positions, including reclined seating. However, the passenger response in pre-crash scenarios in reclined seating differs from that in standard seating, which poses different requirements for biofidelic human body models (HBMs) to evaluate passenger injuries in collisions. This study conducted emergency braking trials in vehicles at an initial velocity of 80 km/h. Five volunteers were exposed to approximately 1 g manual emergency braking (MEB), and the muscle responses at the front passenger seat with backrest angles of 25°, 45°, and 65° were recorded. The electromyography obtained from 14 muscles of the neck, torso, and lower extremity were normalized using maximum voluntary contractions (MVCs). In the quiet sitting phase, the activity levels were low (< 5% MVC) in all muscles for the three sitting positions. During emergency braking, the muscles are activated to restrict the body motion. There were differences in muscle amplitude and onset time in different backrest angles, with higher muscle activity levels in most muscles in a reclined sitting position. In particular, the sternocleidomastoid, rectus abdominis, and vastus medialis showed different patterns in the peak and steady-state phases. We found that the tibialis anterior was consistently activated at a lower level in all sitting postures (< 8% MVC), which indicates limited support of the shank for the body. The data provided in the paper are presented in corridors and intended for use in the development and validation of HBMs with active muscle models to simulate evasive maneuvers that potentially occur before a crash in the reclined sitting position.
The role of physical literacy and mindfulness on health-related quality of life among college students during the COVID-19 pandemic
Authors: Gao Tian Yu , Huang Fu Hua , Liu Ting , Sum Raymond Kim Wai , De Liu Jin , Tang Di , Cai Ding Yi , Jiang Zi Kang , Ma Rui Si 
Published: January 2024

AbstractThis study aimed to examine the role played by the physical literacy and mindfulness in the health-related quality of life (QoL) of college students. In early 2022, 24,236 college students from three universities in southern China were recruited in the study. R software and the lavvan package was utilized to build the structural equation model. The measurement model was composed of three latent factors (physical literacy, mindfulness, and quality of life) and 16 observed variables in total. The results of the measurement model indicated goodness fit with p > .05 in Chi-square result, and GFI = .92. In addition, the comparative fit index (.92), Tucker–Lewis index (.91), root-mean-square error of approximation (.07), and root of mean square residual (.11) were in accord with the cutoff model-fit criteria. The results confirm that physical literacy and mindfulness can play a significant and positive role in the structural equation model of quality of life. In addition, this study provides initial evidence that mindfulness and physical literacy could potentially buffer declines in student QoL during the COVID-19 pandemic. Moreover, this study is the first to develop a structural equation model of QoL with multiple indicators, making it a strong addition to existing research on QoL during a pandemic.