bluuebunny/crossref_metadata_2025_split huggingface dataset:
A neural signature for the subjective experience of threat anticipation under uncertainty
Authors: Liu Xiqin , Jiao Guojuan , Zhou Feng , Kendrick Keith M. , Yao Dezhong , Gong Qiyong , Xiang Shitong , Jia Tianye , Zhang Xiao-Yong , Zhang Jie , Feng Jianfeng , Becker Benjamin 
Published: February 2024

AbstractUncertainty about potential future threats and the associated anxious anticipation represents a key feature of anxiety. However, the neural systems that underlie the subjective experience of threat anticipation under uncertainty remain unclear. Combining an uncertainty-variation threat anticipation paradigm that allows precise modulation of the level of momentary anxious arousal during functional magnetic resonance imaging (fMRI) with multivariate predictive modeling, we train a brain model that accurately predicts subjective anxious arousal intensity during anticipation and test it across 9 samples (total n = 572, both gender). Using publicly available datasets, we demonstrate that the whole-brain signature specifically predicts anxious anticipation and is not sensitive in predicting pain, general anticipation or unspecific emotional and autonomic arousal. The signature is also functionally and spatially distinguishable from representations of subjective fear or negative affect. We develop a sensitive, generalizable, and specific neuroimaging marker for the subjective experience of uncertain threat anticipation that can facilitate model development.
Chronic endoplasmic reticulum stress in myotonic dystrophy type 2 promotes autoimmunity via mitochondrial DNA release
Authors: Rösing Sarah , Ullrich Fabian , Meisterfeld Susann , Schmidt Franziska , Mlitzko Laura , Croon Marijana , Nattrass Ryan G , Eberl Nadia , Mahlberg Julia , Schlee Martin , Wieland Anja , Simon Philipp , Hilbig Daniel , Reuner Ulrike , Rapp Alexander , Bremser Julia , Mirtschink Peter , Drukewitz Stephan , Zillinger Thomas , Beissert Stefan , Paeschke Katrin , Hartmann Gunther , Trifunovic Aleksandra , Bartok Eva , Günther Claudia 
Published: February 2024

AbstractMyotonic dystrophy type 2 (DM2) is a tetranucleotide CCTG repeat expansion disease associated with an increased prevalence of autoimmunity. Here, we identified an elevated type I interferon (IFN) signature in peripheral blood mononuclear cells and primary fibroblasts of DM2 patients as a trigger of chronic immune stimulation. Although RNA-repeat accumulation was prevalent in the cytosol of DM2-patient fibroblasts, type-I IFN release did not depend on innate RNA immune sensors but rather the DNA sensor cGAS and the prevalence of mitochondrial DNA (mtDNA) in the cytoplasm. Sublethal mtDNA release was promoted by a chronic activation of the ATF6 branch of the unfolded protein response (UPR) in reaction to RNA-repeat accumulation and non-AUG translated tetrapeptide expansion proteins. ATF6-dependent mtDNA release and resulting cGAS/STING activation could also be recapitulated in human THP-1 monocytes exposed to chronic endoplasmic reticulum (ER) stress. Altogether, our study demonstrates a novel mechanism by which large repeat expansions cause chronic endoplasmic reticulum stress and associated mtDNA leakage. This mtDNA is, in turn, sensed by the cGAS/STING pathway and induces a type-I IFN response predisposing to autoimmunity. Elucidating this pathway reveals new potential therapeutic targets for autoimmune disorders associated with repeat expansion diseases.
Inorganic perovskite-based active multifunctional integrated photonic devices
Authors: Han Qi , Wang Jun , Tian Shuangshuang , Hu Shen , Wu Xuefeng , Bai Rongxu , Zhao Haibin , Zhang David W. , Sun Qingqing , Ji Li 
Published: February 2024

AbstractThe development of highly efficient active integrated photonic circuits is crucial for advancing information and computing science. Lead halide perovskite semiconductors, with their exceptional optoelectronic properties, offer a promising platform for such devices. In this study, active micro multifunctional photonic devices were fabricated on monocrystalline CsPbBr3 perovskite thin films using a top-down etching technique with focused ion beams. The etched microwire exhibited a high-quality micro laser that could serve as a light source for integrated devices, facilitating angle-dependent effective propagation between coupled perovskite-microwire waveguides. Employing this strategy, multiple perovskite-based active integrated photonic devices were realized for the first time. These devices included a micro beam splitter that coherently separated lasing signals, an X-coupler performing transfer matrix functions with two distinguishable light sources, and a Mach-Zehnder interferometer manipulating the splitting and coalescence of coherent light beams. These results provide a proof-of-concept for active integrated functionalized photonic devices based on perovskite semiconductors, representing a promising avenue for practical applications in integrated optical chips.
Atlantic Water warming increases melt below Northeast Greenland’s last floating ice tongue
Authors: Wekerle Claudia , McPherson Rebecca , von Appen Wilken-Jon , Wang Qiang , Timmermann Ralph , Scholz Patrick , Danilov Sergey , Shu Qi , Kanzow Torsten 
Published: February 2024

AbstractThe 79 North Glacier (79NG) features Greenland’s largest floating ice tongue. Even though its extent has not changed significantly in recent years, observations have indicated a major thinning of the ice tongue from below. Both ocean warming and an increase in subglacial discharge from the ice sheet induced by atmospheric warming could increase the basal melt; however, available observations alone cannot tell which of these is the main driver. Here, we employ a global simulation which explicitly resolves the ocean circulation in the cavity with 700 m resolution to disentangle the impact of the ocean and atmosphere. We find that the interannual variability of basal melt below 79NG over the past 50 years is mainly associated with changes in the temperature of the Atlantic Intermediate Water inflow, which can be traced back across the Northeast Greenland continental shelf to the eastern Fram Strait with a lag of 3 years.
Cepharanthine analogs mining and genomes of Stephania accelerate anti-coronavirus drug discovery
Authors: Leng Liang , Xu Zhichao , Hong Bixia , Zhao Binbin , Tian Ya , Wang Can , Yang Lulu , Zou Zhongmei , Li Lingyu , Liu Ke , Peng Wanjun , Liu Jiangning , An Zhoujie , Wang Yalin , Duan Baozhong , Hu Zhigang , Zheng Chuan , Zhang Sanyin , Li Xiaodong , Li Maochen , Liu Zhaoyu , Bi Zenghao , He Tianxing , Liu Baimei , Fan Huahao , Song Chi , Tong Yigang , Chen Shilin 
Published: February 2024

AbstractCepharanthine is a secondary metabolite isolated from Stephania. It has been reported that it has anti-conronaviruses activities including severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). Here, we assemble three Stephania genomes (S. japonica, S. yunnanensis, and S. cepharantha), propose the cepharanthine biosynthetic pathway, and assess the antiviral potential of compounds involved in the pathway. Among the three genomes, S. japonica has a near telomere-to-telomere assembly with one remaining gap, and S. cepharantha and S. yunnanensis have chromosome-level assemblies. Following by biosynthetic gene mining and metabolomics analysis, we identify seven cepharanthine analogs that have broad-spectrum anti-coronavirus activities, including SARS-CoV-2, Guangxi pangolin-CoV (GX_P2V), swine acute diarrhoea syndrome coronavirus (SADS-CoV), and porcine epidemic diarrhea virus (PEDV). We also show that two other genera, Nelumbo and Thalictrum, can produce cepharanthine analogs, and thus have the potential for antiviral compound discovery. Results generated from this study could accelerate broad-spectrum anti-coronavirus drug discovery.
Exploiting lung adaptation and phage steering to clear pan-resistant Pseudomonas aeruginosa infections in vivo
Authors: Ashworth Eleri A. , Wright Rosanna C. T. , Shears Rebecca K. , Wong Janet K. L. , Hassan Akram , Hall James P. J. , Kadioglu Aras , Fothergill Joanne L. 
Published: February 2024

AbstractPseudomonas aeruginosa is a major nosocomial pathogen that causes severe disease including sepsis. Carbapenem-resistant P. aeruginosa is recognised by the World Health Organisation as a priority 1 pathogen, with urgent need for new therapeutics. As such, there is renewed interest in using bacteriophages as a therapeutic. However, the dynamics of treating pan-resistant P. aeruginosa with phage in vivo are poorly understood. Using a pan-resistant P. aeruginosa in vivo infection model, phage therapy displays strong therapeutic potential, clearing infection from the blood, kidneys, and spleen. Remaining bacteria in the lungs and liver displays phage resistance due to limiting phage adsorption. Yet, resistance to phage results in re-sensitisation to a wide range of antibiotics. In this work, we use phage steering in vivo, pre-exposing a pan resistant P. aeruginosa infection with a phage cocktail to re-sensitise bacteria to antibiotics, clearing the infection from all organs.
Harmonic amide bond density as a game-changer for deciphering the crosslinking puzzle of polyamide
Authors: Xue Yu-Ren , Liu Chang , Ma Zhao-Yu , Zhu Cheng-Ye , Wu Jian , Liang Hong-Qing , Yang Hao-Cheng , Zhang Chao , Xu Zhi-Kang 
Published: February 2024

AbstractIt is particularly essential to analyze the complex crosslinked networks within polyamide membranes and their correlation with separation efficiency for the insightful tailoring of desalination membranes. However, using the degree of network crosslinking as a descriptor yields abnormal analytical outcomes and limited correlation with desalination performance due to imperfections in segmentation and calculation methods. Herein, we introduce a more rational parameter, denoted as harmonic amide bond density (HABD), to unravel the relationship between the crosslinked networks of polyamide membranes and their desalination performance. HABD quantifies the number of distinct amide bonds per unit mass of polyamide, based on a comprehensive segmentation of polyamide structure and consistent computational protocols derived from X-ray photoelectron spectroscopy data. Compared to its counterpart, HABD overcomes the limitations and offers a more accurate depiction of the crosslinked networks. Empirical data validate that HABD exhibits the expected correlation with the salt rejection and water permeance of reverse osmosis and nanofiltration polyamide membranes. Notably, HABD is applicable for analyzing complex crosslinked polyamide networks formed by highly functional monomers. By offering a powerful toolbox for systematic analysis of crosslinked polyamide networks, HABD facilitates the development of permselective membranes with enhanced performance in desalination applications.
Clinical and biomarker results from a phase II trial of combined cabozantinib and durvalumab in patients with chemotherapy-refractory colorectal cancer (CRC): CAMILLA CRC cohort
Authors: Saeed Anwaar , Park Robin , Pathak Harsh , Al-Bzour Ayah Nedal , Dai Junqiang , Phadnis Milind , Al-Rajabi Raed , Kasi Anup , Baranda Joaquina , Sun Weijing , Williamson Stephen , Chiu Yu-Chiao , Osmanbeyoglu Hatice Ulku , Madan Rashna , Abushukair Hassan , Mulvaney Kelly , Godwin Andrew K. , Saeed Azhar 
Published: February 2024

AbstractCAMILLA is a basket trial (NCT03539822) evaluating cabozantinib plus the ICI durvalumab in chemorefractory gastrointestinal cancer. Herein, are the phase II colorectal cohort results. 29 patients were evaluable. 100% had confirmed pMMR/MSS tumors. Primary endpoint was met with ORR of 27.6% (95% CI 12.7-47.2%). Secondary endpoints of 4-month PFS rate was 44.83% (95% CI 26.5-64.3%); and median OS was 9.1 months (95% CI 5.8-20.2). Grade≥3 TRAE occurred in 39%. In post-hoc analysis of patients with RAS wild type tumors, ORR was 50% and median PFS and OS were 6.3 and 21.5 months respectively. Exploratory spatial transcriptomic profiling of pretreatment tumors showed upregulation of VEGF and MET signaling, increased extracellular matrix activity and preexisting anti-tumor immune responses coexisting with immune suppressive features like T cell migration barriers in responders versus non-responders. Cabozantinib plus durvalumab demonstrated anti-tumor activity, manageable toxicity, and have led to the activation of the phase III STELLAR-303 trial.
Diffractive optical computing in free space
Authors: Hu Jingtian , Mengu Deniz , Tzarouchis Dimitrios C. , Edwards Brian , Engheta Nader , Ozcan Aydogan 
Published: February 2024

AbstractStructured optical materials create new computing paradigms using photons, with transformative impact on various fields, including machine learning, computer vision, imaging, telecommunications, and sensing. This Perspective sheds light on the potential of free-space optical systems based on engineered surfaces for advancing optical computing. Manipulating light in unprecedented ways, emerging structured surfaces enable all-optical implementation of various mathematical functions and machine learning tasks. Diffractive networks, in particular, bring deep-learning principles into the design and operation of free-space optical systems to create new functionalities. Metasurfaces consisting of deeply subwavelength units are achieving exotic optical responses that provide independent control over different properties of light and can bring major advances in computational throughput and data-transfer bandwidth of free-space optical processors. Unlike integrated photonics-based optoelectronic systems that demand preprocessed inputs, free-space optical processors have direct access to all the optical degrees of freedom that carry information about an input scene/object without needing digital recovery or preprocessing of information. To realize the full potential of free-space optical computing architectures, diffractive surfaces and metasurfaces need to advance symbiotically and co-evolve in their designs, 3D fabrication/integration, cascadability, and computing accuracy to serve the needs of next-generation machine vision, computational imaging, mathematical computing, and telecommunication technologies.
Offshoring emissions through used vehicle exports
Authors: Newman Saul Justin , Schulte Kayla , Morellini Micol Matilde , Rahal Charles , Leasure Douglas R. 
Published: February 2024

AbstractPolicies to reduce transport emissions often overlook the international flow of used vehicles. We quantify the rate at which used vehicles generated CO2 and pollution for all used vehicles exported from Great Britain—a globally leading used vehicle exporter—across 2005–2021. Destined for low–middle-income countries, exported vehicles fail roadworthiness standards and, even under extremely optimistic ‘functioning-as-new’ assumptions, generate at least 13–53% more emissions than scrapped or on-road vehicles.
Impact of gamma irradiation on physico-chemical and electromagnetic interference shielding properties of Cu2O nanoparticles reinforced LDPE nanocomposite films
Authors: Bekhit Mohamad , Fathy E. S. , Sharaf A. , Shiple M. 
Published: February 2024

AbstractIn the current work, cuprous oxide (Cu2O) nanoparticles coated with Tween 80 were successfully synthesized via the chemical reduction method. Nanocomposites composed of low-density polyethylene (LDPE) and different ratios of Cu2O nanoparticles were fabricated by the melt mixing process. 10% of ethyl vinyl acetate (EVA) as a compatibilizing agent was added to the molten LDPE matrix and the mixing process continued until homogenous nanocomposites were fabricated. To study the influence of ionizing radiation on the fabricated samples, the prepared species were exposed to 50 and 100 kGy of gamma rays. The synthesized Cu2O nanoparticles were investigated by transmission electron microscopy (TEM) and X-ray diffraction (XRD). XRD and TEM analysis illustrated the successful formation of spherical Cu2O nanoparticles with an average size of 16.8 nm. The as-prepared LDPE/Cu2O nanocomposites were characterized via different techniques such as mechanical, thermal, morphological, XRD, and FTIR. Electromagnetic interference shielding (EMI) of the different nanocomposite formulations was performed as a promising application for these materials in practical life. The electromagnetic shielding effectiveness (SE) of the produced samples was measured in the X-band of the radio frequency range from 8 to 12 GHz using the vector network analyzer (VNA) and a proper waveguide. All the samples were studied before and after gamma-ray irradiation under the same conditions of pressure and temperature. The shielding effectiveness increased significantly from 25 dB for unirradiated samples to 35 dB with samples irradiated with 100 kGy, which reflects 40% enhancement in the effectiveness of the shielding.
Effects of sepiolite addition to acrylic-latex paint on pull-off adhesion strength in nanosilver-impregnated and thermally-modified beech (Fagus orientalis L.) wood
Authors: Taghiyari Hamid R. , Antov Petar , Soltani Abolfazl , Ilies Dorina Camelia , Nadali Elham , Lee Seng Hua , Grama Vasile , Simona Tripa 
Published: February 2024

AbstractSepiolite is a silicate mineral that improves the fire properties in solid wood when mixed with a water-based coating. The present study was carried out to investigate and evaluate the effects of sepiolite addition to acrylic-latex paint on the pull-off adhesion strength, as an important characteristic of paints and finishes used in the modern furniture industry and historical furniture as well for preservation and restoration of heritage objects. Sepiolite was added at the rate of 10%, and brushed onto plain-sawn beech (Fagus orientalis L.) wood specimens, unimpregnated and impregnated with a 400 ppm silver nano-suspension, which were further thermally modified at 185 °C for 4 h. The results showed that thermal modification had a decreasing effect on the pull-off adhesion strength, primarily as a result of the thermal degradation of cell-wall polymers (mostly hemicelluloses). Still, a decreased wettability as a result of condensation and plasticization of lignin was also partially influential. Based on the obtained results,thermal modification was found to have a significant influence on pull-off adhesion strength. Sepiolite addition had a decreasing effectin all treatments, though the effect was not statistically significant in all treatments. The maximum and minimum decreases due to sepiolite addition were observed in the unimpregnated control (21%) and the thermally-modified NS-impregnated (4%) specimens. Other aspects of the sepiolite addition, and further studies that cover different types of paints and coatings, should be evaluated before coming to a final firm conclusion in this regard.
Numerical simulation and tool parameters optimization of aluminum alloy transmission intermediate shell
Authors: Zhao Haiyue , Cao Yan , Bai Yu , Yao Hui , Tian Chunlei 
Published: February 2024

AbstractDue to its challenging manufacturing and intricate morphology, the aluminum alloy transmission intermediate shell used in vehicle transmission has been the focus of many academic studies. In this study, the three-dimensional cutting model is condensed to a two-dimensional cutting model and utilized to simulate the finishing process of an aluminum alloy workpiece using the finite element modeling program DEFORM-3D. Through orthogonal testing and range analysis, the impact of integral end mill side edge parameters on cutting performance was investigated. It is determined that tool chamfering has a greater impact on cutting performance than tool rake and relief angles, that chamfering width has the most impact on cutting force, and that chamfering angle has the greatest impact on cutting temperature. The workpiece's surface roughness is tested during a cutting experiment, and an analysis of the data reveals that the finite element simulation model is accurate and the orthogonal test method is reasonable. The tool chamfer has a greater impact on roughness than the tool rake angle and relief angle. The tool settings are further optimized using the firefly method. By examining the data, it is determined that the prediction model is correct and the optimization model is reasonable. The cutting efficiency is higher and the surface quality is better when the chamfer width is 0.17 mm and the chamfer angle is 7.3° or 18.3°. Therefore, optimizing the side edge parameters of the integral end mill during the finishing process of a thin-walled aluminum alloy shell has practical technical value.
Neutrophil to lymphocyte ratio may predict efficacy of anti-PD-1 inhibitors in advanced EGFR-mutant non-small cell lung cancer: retrospective cohort study
Authors: Chen Jianxin , Zheng Qinhong , Zhu Shijian , Qiu Dan , Wang Junhui 
Published: February 2024

AbstractThis study aimed to investigate the associations between the clinical characteristics and effectiveness of anti-PD-1 inhibitors in patients with EGFR-sensitive mutations, aiming to identify the potential subgroup of patients who might benefit from anti-PD-1 inhibitor treatment. Patients with advanced non-small cell lung cancer (NSCLC) harboring epidermal growth factor receptor (EGFR)-sensitive mutations who received subsequent anti-PD-1 inhibitors in combination with chemotherapy/antiangiogenic agents or alone after progression to tyrosine kinase inhibitors (TKIs) were screened. Clinical characteristics, including hematological parameters, were investigated for potential correlations with clinical outcomes. Subgroup and multivariate analyses were used for further confirmation of the relationship. Kaplan–Meier curves and Cox survival regression models using the log-rank test were used for progression-free survival (PFS) and overall survival (OS) assessments between the groups. Multiple regression analysis was performed using the standard regression coefficient values. The Wilcoxon test was used for the analysis of the variation in NLR. P ≤ 0.05 was considered to indicate statistical significance. This study was a retrospective study. Twenty-two patients met the inclusion criteria and were included in the study. The median PFS was 3.05 months (95% CI, 2.9–10.2 months). The median OS was 7.30 months (95% CI, 5.2–18.1 months). PFS in low neutrophil to lymphocyte ratio (NLR ≤ 4) was significantly longer than high NLR (NLR > 4, 5.7 months versus 2.0 months, HR, 0.35, 95% CI, 0.08–0.63, P = 0.0083). The OS in the low NLR group was also significantly better than that in the high NLR group (OS, 21.3 months versus 5.0 months, HR, 0.33; 95% CI, 0.09–0.74; P = 0.0163). In the multivariate analysis, NLR was the only significant factor for OS benefits (β = 3.535, 95% CI, 1.175–10.636, P = 0.025). Further investigation revealed that front-line TKIs exposure may contribute to the elevation or decrease of NLR, and finally lead to different efficacy outcomes by anti-PD-1 inhibitors. The findings suggest that a portion of advanced NSCLC patients with low NLR characteristics (NLR ≤ 4), even those harboring EGFR-sensitive mutations, could benefit from anti-PD-1 inhibitors as further line treatment after progression to EGFR-TKIs.