bluuebunny/crossref_metadata_2025_split huggingface dataset:
Feed quality of modern varieties of Festuca arundinacea and Phleum pratense as an alternative to Lolium perenne in intensively managed grassland with different defoliation schemes
Authors: Becker Talea , Kayser Manfred , Isselstein Johannes 
Published: November 2023

AbstractGrassland production based on cutting-only and an increasing frequency of prolonged periods of drought due to climate change could lead to decreased productivity in Lolium perenne. In field experiments, we tested whether Festuca arundinacea and Phleum pratense could be suitable alternatives to L. perenne on intensively managed grassland on clay, peat and sandy soil. The three grasses were sown in mixture with Poa pratensis and Trifolium repens and subjected to different frequencies of defoliation representing a cutting-only system, simulated grazing system and a mixed system. We found that in systems with at least six defoliations, F. arundinacea represented an acceptable compromise between feed quality (6.4 MJ net energy/kg dry matter (DM), 19.3% crude protein, CP), persistence (mass proportion >90%), and DM yield (12.7 Mg/ha). However, for dairy production based on intensive cutting-only systems, the quality of F. arundinacea was insufficient (5.9 MJ net energy/kg DM, 15.6% CP). Mixtures with P. pratense as the main sown species did not differ significantly in production of net energy and CP from L. perenne in cutting-only systems on sandy soil. On peat land, all sown mixtures were invaded by Holcus lanatus. We found that under frequent defoliation conditions, H. lanatus-rich swards had comparatively good DM yields (9.2 Mg/ha) and a feed quality that would be sufficient for dairy cow nutrition (net energy, 6.2–6.4 MJ/kg DM; 18.8–20.4% CP). We conclude that there is potential to adapt the choice of grasses and mixtures in different production systems to meet the challenges of climate change.
Underreported and taxonomically problematic: characterization of sanguinicolid larvae from freshwater limpets (Burnupiidae), with comments on the phylogeny and intermediate hosts of sanguinicolids
Authors: Outa James Omondi , Avenant-Oldewage Annemariè 
Published: November 2023

AbstractBlood flukes of freshwater fish are understudied worldwide. Consequently, genetic information and data on their intramolluscan stages are scarce. In the current study, freshwater limpets of the genus Burnupia (Burnupiidae) from South Africa were examined for digeneans. Of 1645 specimens, 3.10% were infected by Sanguinicolidae larvae. Four sanguinicolids were distinguished by body size, number of penetration glands, tegumental spines’ patterns and relative sizes of the finfolds on the body and furcae. Analyses of 28S, 18S and ITS rDNA sequences showed that the morphotypes were distinct from each other and from sanguinicolids whose genetic data are available. The present study is the first genetic characterization of sanguinicolids from Africa. Phylogenetic reconstruction revealed that the present species clustered with a sanguinicolid from Poland and were sister to Sanguinicola and Pseudosanguinicola from Russia and USA, respectively. The results indicate that the current species represent an unknown genus. What is more, blood fluke sequences from East Africa (presumed to be sanguinicolids), were distant from Sanguinicolidae and showed a closer relationship with acipensericolids from the USA. Freshwater fish blood flukes seem to be more diverse than previously recorded and use species of at least 13 gastropod families as intermediate hosts.
Genetic diversity and population structure analysis in early generations maize inbreds derived from local germplasm of Eastern Himalayan regions using microsatellite markers
Authors: Lamalakshmi Devi E. , Ngangkham Umakanta , Kumar Chongtham Sunil , S Bhuvaneswari , Bhupenchandra Ingudam , Sarika Konsam , Verma Harendra , Ratankumar Singh Akoijam , Kumar Amit , Basanta Singh Tensubam , Kumar Amit , Bhutia T. L. , Dutta S. K. , Das Shaon Kumar , Devadas Ramgopal , Devi Ayam Gangarani , Das S. P. , Chinglen Meetei Ch. , Meghachandra Singh I. , Mishra V. K. 
Published: November 2023

AbstractThe North-Eastern region (NER) of India falls under the Eastern Himalayan region and it is a bio-diversity hub. Diverse maize landraces with wide adaptability to extreme climatic and soil scenario like heavy rainfall, drought and acidic soil conditions have been grown in NER since time immemorial. However, maize diversity in NER region has drastically reduced due to introduction of high yielding varieties and hybrids. Modern maize breeding programmes are focused on high yield but other unique traits like stay green trait, prolificacy (more than one fertile ear per plant), self-fertilizing ability are also important and the local germplasm of the NER region can contribute with these unique traits. Prior to the selection of any lines in several breeding programmes, assessment of genetic diversity and population structure are basic requirements. Hence, in the present study assessment of genetic diversity and population structure study in 30 maize inbreds developed from different germplasm of NER was undertaken using SSR markers, selected for their broad distribution throughout the genome, in order to assess the extent of allelic diversity among the lines and whether any population structure could be established. In addition to assessing molecular diversity, the study aims to evaluate the potential for yield and other beneficial and unique alleles that have high potential to contribute in the genetic enhancement programme of maize.
Stress response abnormalities transgenerationally inherited via miR-23 downregulation are restored by a methyl modulator during the lactation period
Authors: Nemoto Takahiro , Morita Yuki , Kakinuma Yoshihiko 
Published: November 2023

AbstractLow birthweight rats due to fetal undernutrition sustain higher corticosterone levels when exposed to stress. This is due to the upregulated expression of the pituitary-specific Gas5, a long noncoding RNA (lncRNA) that acts as a glucocorticoid receptor decoy and then competitively inhibiting the binding of glucocorticoids to DNA. However, the mechanism of Gas5 lncRNA upregulation remains unclear. Therefore, using the fetal undernourished model, we identified the factors that regulated Gas5 lncRNA expression and examined their effect on subsequent generations. We found that the expression levels of miR-23 was significantly lower in low birth-weight rats compared with controls. The expression of miR-23 was significantly lower and the expression levels of Gas5 lncRNA were significantly higher in the pituitary gland of low birth-weight offspring of the F2 and F3 generations compared with controls. The methyl modulator intervention in lactating F0 maternal rats restored miR-23 and Gas5 lncRNA expressions not only in F1, F2 and F3 offspring. Moreover, the intervention reduced circulating corticosterone levels and gene expressions in the pituitary gland after restraint stress exposure. In conclusion, miR-23-mediated alterations of the stress response are inherited and restored by methyl modulator intervention during lactation.
Peach tree response to low dosages of dicamba as repeated application or with various spray nozzles
Authors: Bertucci Matthew B. , Butts Thomas R. , Kouame Koffi Badou-Jeremie , Norsworthy Jason K. 
Published: November 2023

Abstract
Two low-dose dicamba exposure trials were conducted on container-grown peach trees in Fayetteville, AR. Peach trees were ‘July Prince’ scions grafted onto ‘Guardian’ rootstock, were transplanted into 19-L containers, and received experimental dicamba treatments in each year. Container trials were initiated in 2020 and repeated on new trees in 2021. In the repeated application trial, dicamba was applied at 5.6 g ae ha−1 (1/100X field rate) in five sequences: an untreated control receiving no herbicide, one treatment receiving only an initial application, and three treatments receiving an initial application plus sequential applications at the same rate occurring at 14 d, 28 d, and 14 d + 28 d after initial treatment (DAT). A separate trial assessed peach tree responses to dicamba applied at 11.2 g ae ha−1 (1/50X field rate) using a selection of nozzles with differing droplet spectrum characteristics: Turbo TeeJet® induction nozzle TTI11002, air induction turbo TwinJet® nozzle AITTJ60-11002, air induction extended-range (XR) TeeJet® nozzle AIXR11002, XR TeeJet® flat-fan nozzle XR11002, and XR TeeJet® flat-fan nozzle XR1100067. Peach tree height, tree cross-sectional area, and leaf chlorophyll content were not reduced in response to any sequence of dicamba application or nozzle selection. Repeated applications of dicamba at a 1/100X rate did not increase peach injury after 28 DAT. By 84 DAT, no effect of nozzle type on peach tree injury was discernable, and all treatments caused below 4% injury. No dicamba or dicamba metabolites were observed in leaf samples collected at 14, 69, or 85 DAT from trees treated with XR1100067 or in untreated controls. While peach tree injury was observed throughout the experiment, dicamba residues were detected consistently only in 2020 from leaf samples of trees treated with dicamba at a 1/50X rate using TTI1102, AITTJ60-11002, AIXR11002, and XR11002 nozzles.
Assessing Chemical and Mineralogical Properties of the Alpine Slab Based on Field Analogs and Ambient Noise Tomography
Authors: Sonnet M. , Labrousse L. , Bascou J. , Plunder A. , Nouibat A. , Paul A. 
Published: November 2023

AbstractRecent geophysical campaigns in the Alps produce images with seismic property variations along the slab of sufficiently fine resolution to be interpreted as rock transformations. Since the reacting European lower crust is presumed responsible for the variations of velocities at the top of the Alpine slab, we sampled local analogs of the lower crustal lithologies in the field and modeled the evolution of equilibrium seismic properties during burial, along possible pressure‐temperature paths for the crustal portion of the slab. The results are then compared to the range of the S‐wave velocities obtained from the S‐wave velocity tomography model along the CIFALPS transect. The velocity increase from 25 to 45 km within the slab, in the tomographic model is best reproduced by the transformation of specific lithologies in the high‐pressure granulite facies along a collisional gradient (30°C/km). Although the crust is certainly not completely homogeneous, the best candidates for the rocks that make up the top of the Alpine dip crustal panel are a kinzigite from Monte San Petrone, a gneiss from the Insubric line, and blueschist mylonite from Canavese. While they may not represent the entirety of the crust, they are sufficient to explain the tomographic velocity of the Alpine slab. A lateral lithological contrast inherited from the Variscan orogeny is not required. Eclogitization, suggested as the first‐order transformation in convergence zones, could be a second‐order transformation in collisional wedges. These results also imply a partially re‐equilibrated thermal gradient, consistent with the Alpine thermal state data at depth.
Enhanced CO2 Degassing From the Tropical Indian Ocean During Cold Climatic Events of the Last Glacial Cycle
Authors: Tarique Mohd , Rahaman Waliur , Lathika N. , Prabhat Priyesh , Thamban Meloth , Misra Sambuddha 
Published: November 2023

AbstractAtmospheric CO2 variability on the glacial–interglacial (G–IG) timescale reflects a balance between oceanic and terrestrial processes involving carbon uptake and release. The Southern Ocean CO2 uptake is considered as an important modulator for the G–IG atmospheric CO2 variability, while the role of tropical ocean ventilation remains enigmatic. We present critical evidence for CO2 ventilation from the tropical Indian Ocean through the reconstruction of the Arabian Sea‐surface pCO2 for the past ∼136 ka utilizing boron isotope (δ11B) record of planktic foraminifera, Globigerinoides ruber. Our site in the Arabian Sea presently acts as a significant source of CO2. The reconstructed ΔpCO2 (ΔpCO2 = pCO2 Seawater − pCO2 Atmosphere) record shows an enhanced CO2 degassing up to ∼50 ppm during the major cooling events, such as the Last Glacial Maximum, Younger Dryas, and Heinrich‐Stadials. Our investigation based on multiproxy records of sea‐surface temperature, salinity, and productivity suggests that the northward invasion and shoaling of southern source CO2‐rich water, coupled with stronger upwelling, resulted in CO2 degassing during these cold intervals. This finding is in align with the tropical Atlantic which also demonstrated an enhanced CO2 degassing during the cold intervals; however, most of the upwelled CO2 was consumed as the water moved away from the upwelling sites. Therefore, our finding, when considered alongside tropical Atlantic records, suggests that tropical oceans played a minor role in reducing atmospheric CO2 levels during the cold intervals of the last glacial cycle, supporting the prevailing hypothesis.
Asymmetric Ionospheric Jets in Jupiter's Aurora
Authors: Wang Ruoyan , Stallard Tom S. , Melin Henrik , Baines Kevin H. , Achilleos Nicholas , Rymer Abigail M. , Ray Licia C. , Nichols Jonathan D. , Moore Luke , O’Donoghue James , Chowdhury Mohammad N. , Thomas Emma M. , Knowles Katie L. , Tiranti Paola I. , Miller Steve 
Published: November 2023

AbstractSimultaneous infrared observations of and H2 emissions from Jupiter's northern aurora using the Near Infrared Spectrograph at Keck Observatory were used to measure the ionospheric and thermospheric wind velocities. ions supercorotate near the dawn auroral oval and subcorotate across the dusk sector and in the dawn polar region relative to the planetary rotation rate, broadly in agreement with past observations and models. An anticyclonic vortex is discovered in H2 flows, closely matching the mean magnetospheric subcorotation when the observed magnetospheric flows are averaged azimuthally. In comparing ion and neutral winds, we measure the line‐of‐sight effective ion drift in the neutral reference frame for the first time, revealing two blue‐shifted sunward flows of ∼2 km/s. Observed and H2 emissions overlap with predictions of the Pedersen conductivity layer, suggesting two different regions of the ionosphere: (a) a deep layer, where neutral forces dominate the thermosphere and symmetric breakdown‐in‐corotation currents can close, and (b) a higher layer, where the observed effective ion drift allows dawn‐to‐dusk Pedersen currents within the upper atmosphere, in turn closing asymmetric currents within the magnetosphere. This ionospheric structure aligns well with recent Juno observations of Jupiter's aurora. The detected thermospheric vortex implies the driving of neutral flows by the momentum from the magnetosphere within the thermosphere and deeper in the atmosphere to potentially 20 mbar. Jovian neutral thermosphere might bridge the gap between current observations and modelings and perhaps be significant to the dynamics of aurora on Earth and other outer planets.
Summertime Airborne Measurements of Ammonia Emissions From Cattle Feedlots and Dairies in Northeastern Colorado
Authors: Juncosa Calahorrano Julieta F. , Pollack Ilana B. , Sullivan Amy P. , Roscioli J. Robert , Caulton Dana R. , McCabe Megan E. , Li En , Pierce Jeffrey R. , Fischer Emily V. 
Published: November 2023

AbstractPhase One of the Transportation and Transformation of Ammonia (TRANS2Am) field campaign took place in northeastern Colorado during the summer of 2021. One of the goals of TRANS2Am was to measure ammonia (NH3) emissions from cattle feedlots and dairies. Most of these animal husbandry facilities are co‐located within oil and gas development, an important source of methane (CH4) and ethane (C2H6) in the region. Phase One of TRANS2Am included 12 near‐source research flights. We present estimates of NH3 emissions ratios with respect to CH4 (NH3 EmR), with and without correction of CH4 from oil and gas, for 29 feedlots and dairies in the region. The data shows larger emissions ratios than previously reported in the literature with a large range of values (i.e., 0.1–2.6 ppbv ppbv−1). Facilities housing cattle and dairy had a mean (std) of 1.20 (0.63) and 0.29 (0.08) ppbv ppbv−1, respectively. We also found that only 15% of the total ammonia (NHx) is in the particle phase (i.e., ) near major sources during the warm summertime months. We examined the evolution of NH3 in one plume that was sampled at different distances and altitudes up to 25 km downwind and estimated the NH3 lifetime against deposition and partitioning to the particle phase to be 87–120 min. Finally, we calculated estimates of NH3 emission rates from four optimally sampled facilities. These ranged from 4 to 29 g NH3 · h−1 · hd−1.
The Precipitation Characteristics of Mesoscale Convective Systems Over Europe
Authors: Da Silva Nicolas A. , Haerter Jan O. 
Published: November 2023

AbstractMesoscale convective systems (MCSs) are common over Europe and can produce severe weather, including extreme precipitation that leads to flash floods. The few studies analyzing the climatological characteristics of MCSs over Europe are either focusing on only few years of data or on limited subareas. Using the recent Integrated MultisatellitE Retrievals for Global Precipitation Measurement (IMERG) satellite precipitation climatology, we identify and track MCSs for 16 years over Europe. The tracking algorithm relies on the overlap of precipitation features between consecutive time steps and, unlike previous studies, uses lightning data to distinguish convective from stratiform rain patches, which can reduce potential identification errors. We analyze this new European MCS climatology to characterize MCS precipitation properties and conclude the following results: MCSs overall occur most frequently over the Mediterranean and Atlantic during fall and winter, whereas during summer, they concentrate over the continent. Typically, more than a third of seasonal precipitation can be attributed to MCSs, and their contribution to extreme precipitation is even greater, often exceeding 60%. MCSs over the continent display a clear diurnal cycle peak during the afternoon, and some continental areas also show a second, nocturnal peak. The MCS diurnal cycle for coastal and oceanic regions is more variable. We find that the spatiotemporal distribution of MCS precipitation can be attributed to specific environmental variables, namely (sea) surface temperature, fronts occurrence and convective instability. While inland MCS precipitation is mostly constrained by thermodynamics, for the coastal MCSs the atmospheric dynamics plays an important role as well.
A missense variant in EXOSC8 causes exon skipping and expands the phenotypic spectrum of pontocerebellar hypoplasia type 1C
Authors: Zaki Maha S. , Abdel-Ghafar Sherif F. , Abdel-Hamid Mohamed S. 
Published: November 2023

AbstractPontocerebellar hypoplasia (PCH) is a rare heterogeneous neurodegenerative disorder affecting the pons and cerebellum and is currently classified into 17 types (PCH1-PCH17). PCH1 is distinguishable from other types by the association of spinal motor neuron dysfunction. Based on the underlying genetic etiology, PCH1 is further classified into 6 different subtypes (PCH1 A-F). Of them, PCH type 1C is caused by pathogenic variants in EXOSC8 gene and so far, only four families have been described in the literature. In this study, we report a new patient with PCH1 who proved by whole-exome sequencing to harbor a novel homozygous missense variant in the splice region of EXOSC8 gene (c.238 G > A; p.Val80Ile). Studying mRNA of the patient confirmed that this variant results in skipping of exon 5 of the gene and early protein truncation. Our patient presented with the main clinical findings of PCH type 1C including psychomotor retardation, spasticity, spinal muscle atrophy, and respiratory problems. However, unlike most of the reported cases, he did not develop hearing or visual impairment and displayed a longer survival. In addition, our patient had dysmorphic facies, nystagmus, congenital esotropia and contractures which were infrequently described in patients with EXOSC8. Diaphragmatic hernia, dilated lateral ventricles, hypoplastic temporal lobes, and thinning of the brain stem were additional new findings noted in our patient. This study presents the fifth family with this extremely rare type of PCH and expands the associated clinical and brain imaging findings.
Dietary patterns and associations with metabolic risk factors for non-communicable disease
Authors: Alamnia Tilahun Tewabe , Sargent Ginny M. , Kelly Matthew 
Published: November 2023

AbstractUnhealthy dietary habit is a major contributor to the burden of non-communicable diseases such as cardiovascular diseases, diabetes, and hypertension, especially the increased burden in low- and middle-income countries. Evidence of the association between specific dietary patterns and health outcomes is scarce in sub–Saharan African countries. This study aimed to identify principal dietary patterns and evaluate associations with metabolic risk factors including hypertension, overweight/obesity, and abdominal obesity in Northwest Ethiopia. A community-based cross-sectional survey was conducted among adults in Bahir Dar, Northwest Ethiopia, from 10 May 2021 to 20 June 2021. Dietary intake was collected using a validated food frequency questionnaire. Anthropometric (weight, height, hip/waist circumference) and blood pressure measurements were performed using standardized tools. Principal component analysis was conducted to derive dietary patterns. Chi-square and logistic regression analyses were used to examine the association between dietary patterns and metabolic risk factors and with sociodemographic and individual risk factors. This study derives two types of dietary patterns: ‘westernized’ dietary pattern, which is positively correlated with consumption of meat, dairy, fast foods, alcohol, fish, sweet/sugary foods, and fruits, and ‘traditional’ dietary pattern, which is positively correlated with intake of cereals, vegetables, legumes, roots/tubers, coffee, and oils. The prevalence of hypertension was significantly lower in adults with higher quantiles of westernized dietary pattern (AOR = 0.28, 95% CI 0.13 to 0.60; p < 0.01; quantile three); and (AOR = 0.35, 95% CI 0.17, 0.75; p < 0.01; quantile four). Younger, married, and middle-income adults were associated with the highest quantile of the westernized pattern. Being females and having middle income associated with the highest quantile of traditional dietary patterns (p < 0.05). This study suggested two types of dietary patterns, westernized and traditional, among adults in Northwest Ethiopia and revealed a significant association with metabolic risk factors like hypertension. Identifying the main dietary patterns in the population could be informative to consider local-based dietary recommendations and interventions to reduce metabolic risk factors.
Osmotic and Gibbs–Donnan equilibrium for ions and neutral solutes
Authors: Waniewski Jacek 
Published: November 2023

AbstractThe general set of equations for the equilibrium of two solutions with a mixture of non-permeating and permeating ions and neutral solutes at each side of a permselective membrane is formulated using the principles of electroneutrality and mass conservation law for each solution, and equilibrium conditions: equality of electrochemical potentials at both sides of the membrane for each permeating solution component. There is at least one permeating neutral chemical species (solvent) in the system. The theory is in general valid for non-ideal solutions. The generalized Gibbs–Donnan (G–D) equilibrium coefficients depend on activities/fractions of all species at one side of the membrane, and charges of ions and partial molar volumes of all species. The equilibrium osmotic pressure across the membrane is also provided by the theory and can be calculated using the ratio of activities (or equivalently the G–D factor) of any permeating neutral solute (including solvent) or the ratios of activities (or equivalently the G–D factors) of any two permeating ions.