bluuebunny/crossref_metadata_2025_split huggingface dataset:
A case study on performance of structures during Turkey-Syria multiple earthquakes occurred on February 6, 2023
Authors: Thippa Pavan Kumar , Tripathi R. K. , Bhat Govardhan 
Published: December 2023

Abstract
Buildings are an important components of both urban and rural infrastructure, and it is crucial that they perform well during a seismic event. The earthquakes occurred on February 6, 2023 in Kahramanmaras, Turkey, which also had an impact on eleven other locations surrounding it. Turkey has suffered significantly from fatalities as well as damage to structures and other facilities. The area was severely damaged by two earthquakes, Mw7.7 and Mw7.6, which occurred within a time window of roughly 9 hours on February 6, 2023 in Turkey. Seismic regulations only take into account the design of structures during a single earthquake; multiple earthquake occurrences are not taken into account. The performance of reinforced concrete buildings, masonry buildings, and precast buildings damaged during seismic sequences are discussed in this case study. From this study it is observed that, buildings that are subject to multiple earthquakes often collapse because of damage by previous earthquake, weak foundations, detailing errors at site, the use of poor materials, and inadequate craftsmanship. Multiple earthquakes should be considered during the analysis and design phase of structures, and seismic code regulations should be adjusted to allow for multiple earthquakes.
Seismic studies on energy dissipation device performance for irregular steel structure in different soil conditions using ETABS
Authors: Prashanth Kumar P. , Jyothirmai A. 
Published: December 2023

Abstract
Earthquakes are sudden loads that occur and cause low to severe damage to the structure. Based on the intensity of an earthquake, the zones are divided into II, III, IV and V as per IS code 1893:2016(Part-1). Regular, Stiffness Irregular and Mass Irregular G+7 steel building is designed for four zones in ETABS software. Linear Static and Linear Dynamic analyses are performed on all zones for different conditions of soils. In this work, a steel G+7 storeyed structure is developed in ETABS and subjected to seismic loading. For Energy dissipation, the dampers are installed in the building and the analysis process is done. In this research, seismic study is carried out on various models using energy dissipation devices such as fluid viscous damper. The different irregularities in a building in four zones are analyzed with and without using dampers. The study is concluded by comparing displacement and storey shear values for different models.
Corrosion Studies on Ternary Blended High Performance Self-Compacting Concretes Containing Fly Ash and Graphene Oxide
Authors: Pavankalyan P , Durga Prasad R , Soujanya J 
Published: December 2023

Abstract
Effective utilization of industrial byproducts as mineral admixtures and filler materials in cement concrete has been a practice to develop sustainable construction materials. The use of mineral admixtures like fly ash, silica fume, ground granulated blast furnace slag etc. as a partial replacement of cements have proved to improve the performance characteristics of concrete through reduced porosity and improved mechanical characteristics through pozzolanic effect and filler effect. Moreover, extensive research in the recent period has been mainly focused to study the effect of nano-additions in concrete. The present work was focused to assess the performance of ternary blended high performance self-compacting concretes with varied quantities of graphene oxide additions. Control concrete of M60 grade was designed in correspondence to IS-10262:2019 containing fly ash, and three other concretes mixes were formulated with 0.03%, 0.06% and 0.09% addition of Graphene Oxide (By weight of total cementitious material). The specimens were cast and tested at different ages to determine rheological, mechanical and durability characteristics by evaluating slump flow, Compressive Strength, Split Tensile Strength, Absorption- Desorption characteristics, Rapid Chloride Penetration Test values and resistance to accelerated corrosion cracking. Moreover, the specimens were assessed for corrosion resistance by conducting a cyclic wet – dry test, where parameters like UPV & depth of chloride penetration in concrete were measured. Results depict the fact that addition of Graphene Oxide improves the durability characteristics to a great extent. The optimum results for most of parameters were obtained at 0.06% of Graphene Oxide addition in comparison to remaining mix proportions.
An Application of Geopolymer stabilized expansive soil to reduce the rainfall-based erosion in slopes
Authors: Dudekula Janaki Ramudu , Chigurupati Sudharani 
Published: December 2023

Abstract
Soil stabilization is critical in civil infrastructure, acting as a cornerstone for sustainable and resilient building practices. It enables the construction of strong foundations capable of withstanding enormous loads and adverse conditions, assuring the safety and lifespan of structures such as buildings and roads. The utilization of industrial by products for enhancing the qualities of locally expanding soils has become increasingly popular, mostly due to its low carbon emissions and cost-effectiveness. The present investigation focused on the effect of the addition of Ground Granulated Blast furnace Slag (GGBS) and Geopolymer solution to expansive soil in order to reduce the erosion of slopes. Unconfined compressive strength tests were performed and found that 10% GGBS is the optimum amount for stabilization. SEM studies were conducted to know the microstructure before and after stabilization. The study determined that the rate of rainfall erosion on the stabilized slope was lower compared to the untreated soil, and the load-carrying capacity of the stabilized slope was much greater.
Geospatial delineation of flood susceptible zones using analytical hierarchy process
Authors: Singh Ravindra Kumar , Singha Soumya Sucharita , Singha Sudhakar , Pasupuleti Srinivas , Kumar Villuri Vasanta Govind 
Published: December 2023

Abstract
Demarcation of flood-prone areas based on risk level plays a key role in flood management systems. Geospatial approach has gained much significance among the researcher working in flood risk management. This work incorporated an analytic hierarchy process (AHP) and geographic information system (GIS) to delineate the flood susceptible zones of the lower Damodar River basin. Various influencing factors were initially assigned with weights with respect to their relative importance towards flood susceptibility and integrated into GIS platform by weighted overlay approach. Based on the current study area, the flood zone map was sub-classified into four zones, namely critical, high and low, and safe zone, respectively. Moreover, sensitivity analysis was also performed to evaluate the most significant factors in flood susceptibility using the exclusion of factors from the estimation of flood zone index. Sensitivity analysis showed that River distance and elevation are the most sensitive factors for evaluating flood zonation.
The sugar kelp Saccharina latissima I: recent advances in a changing climate
Authors: Diehl Nora , Li Huiru , Scheschonk Lydia , Burgunter-Delamare Bertille , Niedzwiedz Sarina , Forbord Silje , Sæther Maren , Bischof Kai , Monteiro Catia 
Published: December 2023

Abstract

Background
The sugar kelp Saccharina latissima is a Laminariales species widely distributed in the Northern Hemisphere. Its physiology and ecology have been studied since the 1960s, given its ecological relevance on western temperate coasts. However, research interest has been rising recently, driven mainly by reports of negative impacts of anthropogenically induced environmental change and by the increased commercial interest in cultivating the species, with several industrial applications for the resulting biomass.

Scope
We used a variety of sources published between 2009 to May 2023 (but including some earlier literature where required), to provide a comprehensive review of the ecology, physiology, biochemical and molecular biology of S. latissima. In so doing we aimed to better understand the species’ response to stressors in natural communities, but also inform the sustainable cultivation of the species.

Conclusion
Due to its wide distribution, S. latissima has developed a variety of physiological and biochemical mechanisms to adjust to environmental changes, including adjustments in photosynthetic parameters, modulation of osmolytes and antioxidants, reprogramming of gene expression and epigenetic modifications, among others summarized in this review. This is particularly important because massive changes in the abundance and distribution of S. latissima have already been observed. Namely, presence and abundance of S. latissima has significantly decreased at the rear edges on both sides of the Atlantic, and increased in abundance at the polar regions. These changes were mainly caused by climate change and will therefore be increasingly evident in the future. Recent developments in genomics, transcriptomics and epigenomics have clarified the existence of genetic differentiation along its distributional range with implications in the fitness at some locations. The complex biotic and abiotic interactions unraveled here demonstrated the cascading effects the disappearance of a kelp forest can have in a marine ecosystem. We show how S. latissima is an excellent model to study acclimation and adaptation to environmental variability and how to predict future distribution and persistence under climate change.
LncLocFormer: a Transformer-based deep learning model for multi-label lncRNA subcellular localization prediction by using localization-specific attention mechanism
Authors: Zeng Min , Wu Yifan , Li Yiming , Yin Rui , Lu Chengqian , Duan Junwen , Li Min 
Published: December 2023

Abstract

Motivation
There is mounting evidence that the subcellular localization of lncRNAs can provide valuable insights into their biological functions. In the real world of transcriptomes, lncRNAs are usually localized in multiple subcellular localizations. Furthermore, lncRNAs have specific localization patterns for different subcellular localizations. Although several computational methods have been developed to predict the subcellular localization of lncRNAs, few of them are designed for lncRNAs that have multiple subcellular localizations, and none of them take motif specificity into consideration.

Results
In this study, we proposed a novel deep learning model, called LncLocFormer, which uses only lncRNA sequences to predict multi-label lncRNA subcellular localization. LncLocFormer utilizes eight Transformer blocks to model long-range dependencies within the lncRNA sequence and shares information across the lncRNA sequence. To exploit the relationship between different subcellular localizations and find distinct localization patterns for different subcellular localizations, LncLocFormer employs a localization-specific attention mechanism. The results demonstrate that LncLocFormer outperforms existing state-of-the-art predictors on the hold-out test set. Furthermore, we conducted a motif analysis and found LncLocFormer can capture known motifs. Ablation studies confirmed the contribution of the localization-specific attention mechanism in improving the prediction performance.

Availability and implementation
The LncLocFormer web server is available at http://csuligroup.com:9000/LncLocFormer. The source code can be obtained from https://github.com/CSUBioGroup/LncLocFormer.
Bringing science to the public in the light of evolution
Authors: Blatter Marie-Claude , Zahn-Zabal Monique , Moix Samuel , Pichon Béatrice , Dessimoz Christophe , Glover Natasha 
Published: December 2023

Abstract
Evolution stands as a foundational pillar within modern biology, shaping our understanding of life. Studies related to evolution, for example constructing phylogenetic trees, are often carried out using DNA or protein sequences. These data, readily accessible from public databases, represent a treasure trove of resources that can be harnessed to create engaging activities with the public. At the heart of our project lies a collection of “stories” about evolution, each rooted in genuine scientific publications that furnish both biological context and supporting evidence. These narratives serve as the focal point of our LightOfEvolution.org website. Each story is accompanied by a dedicated “Your Turn to Play” section. Within this section, we furnish user-friendly activities and step-by-step guidelines, equipping visitors with the means to replicate analyses showcased in the highlighted publications. For example, the website OhMyGenes.org, relying on authentic scientific data, provides the capability to compute the proportion of shared genes across different species. Here, visitors can address the captivating question: “How many genes do we share with a banana?” To extend the educational reach, we have developed a series of modular activities, also related to the stories. These activities have been thoughtfully designed to be adaptable for face-to-face workshops held in classrooms or presented during public events. We aim to create stories and activities that resonate with participants, offering a tangible and enjoyable experience. By providing opportunities that reflect real-world scientific practices, we seek to offer participants valuable insights into the current workings of scientists “in the light of evolution.”
When the Body Speaks: Body-Mapping the Somatic Symptoms of Stress in Hospital Social Workers
Authors: Sabbagh James , Fox Mim , Ray Nandini 
Published: December 2023

Abstract
Impact of workplace stress is a significant issue for social workers in hospital practice. This study aims to understand somatic stress in hospital social workers, the physical embodiment of stress and recognition within employing organisations and education. Using a collaborative inquiry methodology, data were collected using body-mapping workshops. Following Interpretive Phenomenological Analysis, three overarching themes were generated: experiences of somatisation, deliberate disembodiment, stress management and staff well-being. Social worker findings include the inhabiting of multiple bodies at work and the impact of the work environment on well-being. Harmful coping strategies and a lack of existing support and recognition were identified. Recommendations include an integration of somatic stress into the existing well-being scholarship to aid in acknowledgement and resourcing.
Validation of the GERAADA score to predict 30-day mortality in acute type A aortic dissection in a single high-volume aortic centre
Authors: Berezowski Mikolaj , Kalva Saiesh , Bavaria Joseph E , Zhao Yu , Patrick William L , Kelly John J , Szeto Wilson Y , Grimm Joshua C , Desai Nimesh D 
Published: December 2023

Abstract

OBJECTIVES
This study aimed to evaluate employing the German Registry of Acute Aortic Dissection Type A (GERAADA) score to predict 30-day mortality in an aortic centre in the USA.

METHODS
Between January 2010 and June 2021, 689 consecutive patients underwent surgery for acute type A dissection at a single institution. Excluded were patients with missing clinical data (N = 4). The GERAADA risk score was retrospectively calculated via a web-based application. Model discrimination power was calculated with c-statistics from logistic regression and reported as the area under the receiver operating characteristic curve with 95% confidence intervals. The calibration was measured by calculating the observed versus estimated mortality ratio. The Brier score was used for the overall model evaluation.

RESULTS
Included were 685 patients [mean age 60.6 years (SD: 13.5), 64.8% male] who underwent surgery for acute type A aortic dissection. The 30-day mortality rate was 12.0%. The GERAADA score demonstrated very good discrimination power with an area under the receiver operating characteristic curve of 0.762 (95% confidence interval 0.703–0.821). The entire cohort’s observed versus estimated mortality ratio was 0.543 (0.439–0.648), indicating an overestimation of the model-calculated risk. The Brier score was 0.010, thus revealing the model’s acceptable overall performance.

CONCLUSIONS
The GERAADA score is a practical and easily accessible tool for reliably estimating the 30-day mortality risk of patients undergoing surgery for acute type A aortic dissection. This model may naturally overestimate risk in patients undergoing surgery in experienced aortic centres.
Gender Differences in Social Embeddedness Determinants of Loneliness Among Moroccan and Turkish Older Migrants
Authors: ten Kate Rowan L F , Fokkema Tineke , van Tilburg Theo G 
Published: December 2023

Abstract

Objectives
Moroccan and Turkish migrants residing in Northwestern Europe have high loneliness levels. This study examines gender differences in loneliness within this migrant population. The migrants have gender-segregated social roles at home and in public, which might lead to gender differences in what aspects of social relationships can explain variation in loneliness.

Methods
Respondents are from the Longitudinal Aging Study Amsterdam with 446 first-generation Moroccan and Turkish migrants in the Netherlands, aged between 55 and 66 years. We use interaction effects to test for gender differences in determinants of loneliness.

Results
Men and women have a similar, moderate level of loneliness. Having a spouse and receiving care from children are more strongly related with lower loneliness levels in men than in women. Coethnic ties play an equally important role for men and women. In men, frequent mosque attendance is related with greater loneliness, but not in women.

Discussion
Family ties are more protective against loneliness for older men than for older women, possibly indicating that migrant women’s expectations regarding family go above and beyond having a spouse, receiving intergenerational care, or having frequent contact with children. In addition, migrant older men’s higher expectations regarding a public social life could make their social life in the Netherlands less fulfilling, resulting in greater loneliness.
A Facility-Level Analysis of Nursing Home Compare’s Five-Star Rating and Maryland’s Family Satisfaction with Care Survey
Authors: Kusmaul Nancy , Millar Roberto J , Diehl Christin , Stockwell Ian 
Published: December 2023

Abstract

Background and Objectives
Nursing facilities care for individuals with cognitive and/or physical disabilities. Poor quality is associated with greater disease and mortality. Quality comprises many factors and different stakeholders value different factors. This study aimed to compare two care quality frameworks, one based on observable factors and one on family satisfaction.

Research Design and Methods
We merged publicly available 2021 Maryland nursing facility data. The Maryland Health Care Commission surveys long-term care residents’ family satisfaction across seven domains. Centers for Medicare and Medicaid Services’ (CMS) 5-star ratings aggregate inspections, staffing, and quality measures. We used univariate and bivariate statistics to compare the frameworks.

Results
The data set included 220 facilities and 4,610 survey respondents. The average facility rating was 7.70/10 and overall 77% of respondents would recommend the facility. Eighty-six percent of respondents from 5-star facilities, 79% from 4-star facilities, and 76% from 3-star facilities would recommend the facility compared to 65% from 1-star facilities (p &lt; .001, p &lt; .01, and p &lt; .05, respectively). Four or 5-star facilities received significantly higher ratings (8.33, p &lt; .001; 7.75, p &lt; .05, respectively) than 1-star facilities (7.07).

Discussion and Implications
Our results corroborated earlier findings of strong associations between CMS ratings and satisfaction at the extremes of the 5-star system. These associations are inconsistent across family-reported domains. This suggests overlap between the frameworks. CMS ratings address care quality; family satisfaction measures quality of life and care quality. High satisfaction is associated with high care quality and quality of life; lower satisfaction is associated with lower care quality.
Severe Acute Respiratory Syndrome Coronavirus 2 Infection Alters Mediators of Lung Tissue Remodeling In Vitro and In Vivo
Authors: Wong Michael , Gain Chandrima , Sharma Madhav B , Fotooh Abadi Leila , Hugo Cristelle , Vassilopoulos Hariclea , Daskou Maria , Fishbein Gregory A , Kelesidis Theodoros 
Published: December 2023

Abstract

Background
Altered mediators of airway tissue remodeling such as matrix metalloproteinases (MMPs) in severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection may contribute to morbidity in coronavirus disease 2019 (COVID-19); however, the differential impact of SARS-CoV-2 variants of concern (VOCs) on MMPs is unknown.

Methods
Using both in vitro human airway cell culture model and in vivo transgenic mouse model of SARS-CoV-2 infection, we studied the differential effect of SARS-CoV-2 VOCs on expression of key MMPs and inflammatory mediators in airway cells and tissues.

Results
The most consistent findings with all SARS-CoV-2 variants in infected compared to uninfected human bronchial epithelial cell air–liquid interface cultures were the SARS-CoV-2–induced increases in MMP-12 and tissue inhibitor of MMPs. Infection with both SARS-CoV-2 wild type and SARS-CoV-2 Delta variant over 3 days postinfection (dpi) and with Beta variant over 7 dpi increased lung tissue levels of MMP-9 compared to uninfected mice. Overall, SARS-CoV-2 variants had differential dose-dependent impact on secretion of MMP-1, MMP-2, MMP-9, and MMP-12 that varied at the protein versus the gene level and in the early noninflammatory compared to late inflammatory phase of infection.

Conclusions
We provide novel mechanistic insight that the differential impact of SARS-CoV-2 variants on severity of COVID-19 may partially be attributed to unique changes in MMPs.
Severe esophageal stricture after perforation and necrotizing esophagitis: unusual presentation of a duodenal gastrinoma
Authors: Ito Sunao , Ogawa Ryo , Komura Masayuki , Hayakawa Shunsuke , Okubo Tomotaka , Sagawa Hiroyuki , Tanaka Tatsuya , Mitsui Akira , Takahashi Satoru , Takiguchi Shuji 
Published: December 2023

Abstract
Gastrinomas are pancreatic or duodenal endocrine tumors that secrete excess gastrin, which causes gastroesophageal reflux disease, peptic ulcers, and chronic diarrhea. Due to the rarity of the disease, nonspecific symptoms, and the outstanding effect of proton pump inhibitors, diagnosing gastrinomas is difficult. Here, we present the case of a 58-year-old woman who had a duodenal gastrinoma that caused rare but critical events, including esophageal perforation, necrotizing esophagitis, and severe esophageal stricture. She presented with a non-malignant severe lower esophageal stricture, which was resistant to endoscopic dilatation. During esophagectomy, a duodenal mass was excised and diagnosed as gastrinoma. This was considered the main cause of all events. Gastrinomas are rarely encountered in clinical practice, but early diagnosis is necessary to avoid serious conditions. Therefore, whenever we encounter a patient with gastroesophageal reflux disease requiring long-term treatment or is refractory, we must not forget to screen for gastrinomas.