Pathogen survival in groundwater: Influence of redox and organic matter
Authors: Weaver Louise , McGill Erin , Sitthirit Panan , Webber Judith , Abraham Phil , Close Murray 
Published: October 2023

Microbial pathogen survival within the environment can be variable and can depend on many criteria, including environmental conditions e.g. oxygen concentration, temperature, pH, sunlight, etc. (e.g., Horswell et al. (2010)). Groundwater has been shown to enable the prolonged survival of pathogenic organisms due to the absence of sunlight and relatively stable temperatures (Cook and Bolster 2007). In other studies, however, survival has been lower in groundwater when compared with a sterile environment (e.g. sterilised groundwater or artificial groundwater) due to the presence of competing organisms and adverse conditions of pH and redox.
To elucidate these discrepancies two experiments were designed: The first, hypothesised that, due to Campylobacters' low tolerance to high oxygen levels, survival in oxic (dissolved oxygen (DO) levels over 5 mg per L) would be less than in anoxic groundwater (DO levels below 2 mg per L). The second hypothesised that the survival of the pathogen Salmonella typhimurium, in groundwater, will be enhanced by organic carbon.

METHODS

Campylobacter experiment:
Campylobacter jejuni isolated from the Havelock North drinking water source was used (designated HN16) (Gilpin et al. 2020). To compare the survival of the outbreak strain with type strain Campylobacter, NCTC 11351 was used.
Salmonella experiment:
For this experiment, environmental isolates were used rather than laboratory strains. Salmonella, isolated from a stream in Wellington, New Zealand, was identified as Salmonella enterica serovar Typhimurium. The Escherichia coli used was a phylogroup A, isolated from stream sediment in Whangarei Falls, New Zealand.
Mesocosm experiments were established containing groundwater (oxic and anoxic for Campylobacter experiment and ultrafiltered, groundwater, groundwater amended with 1% or 10% dissolved organic carbon (DOC). pH, dissolved oxygen (DO), and temperature were monitored over the experimental period. The temperature was maintained at 12-14°C during both experiments.
Samples (5 mL) of the groundwater from each jar were taken aseptically at set time points over the experimental period. Samples were then serially diluted in sterile peptone water to give a dilution series from 10-1 to 10-4. Samples were analysed by plating onto selective media.

RESULTS

Campylobacter experiment:
The results presented demonstrated differences in the survival of the two Campylobacter strains tested and differences in survival of Campylobacter HN16 depending on groundwater type. Fig. 1 shows the average concentration of Campylobacter strains in groundwater types over time. The results presented are average of three replicates. Over the whole experimental period survival of Campylobacter HN16 was greatest in anoxic groundwater, and only a 1 log reduction was observed (Fig. 1), equating to a 79.6% survival after 16 days. The die-off rate of Campylobacter HN16 in anoxic groundwater was calculated to be 0.0873 days and T90 6.85 days.
Salmonella experiment:
Die-of rates for Salmonella were similar over the course of the experiment when no or low levels of DOC were present (Fig. 2a). At high levels of DOC, however, Salmonella showed similar survival to the control. After 84 days only a 1 Log decrease was observed. In comparison, E. coli died off at a faster rate than Salmonella in all mesocosms (Fig. 2). It is interesting to note that in the high DOC mesocosms after day 56 counts of E. coli remained at 103 per mL until the end of the experiment.

Conclusions and significance

Both experiments demonstrated the survival of pathogenic microorganisms in varying groundwater conditions. The variation in the outbreak strain Campylobacter compared to the type strain indicated variation within species that may lead to enhanced survival in the environment. The Salmonella experiment indicated the presence of additional organic carbon can enhance the survival of pathogens in groundwater. In addition, the variation between the microbial indicator E. coli and Salmonella provides evidence of differences in the survival of microbes in the environment and indicates caution is needed when considering the survival of pathogens in groundwater if reliance is made on microbial indicator organisms.