bluuebunny/crossref_metadata_2025_split huggingface dataset:
Extending loophole-free nonlocal correlations to arbitrarily large distances
Authors: Chaturvedi Anubhav , Viola Giuseppe , Pawłowski Marcin 
Published: January 2024

AbstractQuantum theory allows spatially separated observers to share nonlocal correlations, which enable them to accomplish classically inconceivable information processing and cryptographic feats. However, the distances over which nonlocal correlations can be realized remain severely limited due to their high fragility to noise and high threshold detection efficiencies. To enable loophole-free nonlocality across large distances, we introduce Bell experiments wherein the spatially separated parties randomly choose the location of their measurement devices. We demonstrate that when devices close to the source are perfect and witness extremal nonlocal correlations, such correlations can be extended to devices placed arbitrarily far from the source. To accommodate imperfections close to the source, we demonstrate an analytic trade-off: the higher the loophole-free nonlocality close to the source, the lower the threshold requirements away from the source. We utilize this trade-off and formulate numerical methods to estimate the critical requirements of individual measurement devices in such experiments.
In vivo human T cell engineering with enveloped delivery vehicles
Authors: Hamilton Jennifer R. , Chen Evelyn , Perez Barbara S. , Sandoval Espinoza Cindy R. , Kang Min Hyung , Trinidad Marena , Ngo Wayne , Doudna Jennifer A. 
Published: January 2024

AbstractViruses and virally derived particles have the intrinsic capacity to deliver molecules to cells, but the difficulty of readily altering cell-type selectivity has hindered their use for therapeutic delivery. Here, we show that cell surface marker recognition by antibody fragments displayed on membrane-derived particles encapsulating CRISPR–Cas9 protein and guide RNA can deliver genome editing tools to specific cells. Compared to conventional vectors like adeno-associated virus that rely on evolved capsid tropisms to deliver virally encoded cargo, these Cas9-packaging enveloped delivery vehicles (Cas9-EDVs) leverage predictable antibody–antigen interactions to transiently deliver genome editing machinery selectively to cells of interest. Antibody-targeted Cas9-EDVs preferentially confer genome editing in cognate target cells over bystander cells in mixed populations, both ex vivo and in vivo. By using multiplexed targeting molecules to direct delivery to human T cells, Cas9-EDVs enable the generation of genome-edited chimeric antigen receptor T cells in humanized mice, establishing a programmable delivery modality with the potential for widespread therapeutic utility.
A new genomic framework to categorize pediatric acute myeloid leukemia
Authors: Umeda Masayuki , Ma Jing , Westover Tamara , Ni Yonghui , Song Guangchun , Maciaszek Jamie L. , Rusch Michael , Rahbarinia Delaram , Foy Scott , Huang Benjamin J. , Walsh Michael P. , Kumar Priyadarshini , Liu Yanling , Yang Wenjian , Fan Yiping , Wu Gang , Baker Sharyn D. , Ma Xiaotu , Wang Lu , Alonzo Todd A. , Rubnitz Jeffrey E. , Pounds Stanley , Klco Jeffery M. 
Published: January 2024

AbstractRecent studies on pediatric acute myeloid leukemia (pAML) have revealed pediatric-specific driver alterations, many of which are underrepresented in the current classification schemas. To comprehensively define the genomic landscape of pAML, we systematically categorized 887 pAML into 23 mutually distinct molecular categories, including new major entities such as UBTF or BCL11B, covering 91.4% of the cohort. These molecular categories were associated with unique expression profiles and mutational patterns. For instance, molecular categories characterized by specific HOXA or HOXB expression signatures showed distinct mutation patterns of RAS pathway genes, FLT3 or WT1, suggesting shared biological mechanisms. We show that molecular categories were strongly associated with clinical outcomes using two independent cohorts, leading to the establishment of a new prognostic framework for pAML based on these updated molecular categories and minimal residual disease. Together, this comprehensive diagnostic and prognostic framework forms the basis for future classification of pAML and treatment strategies.
Synthesis of novel azo pyrazole disperse dyes for dyeing and antibacterial finishing of PET fabric under supercritical carbon dioxide
Authors: Sofan Mamdouh , El-Taweel Fathy , Abdel-Rahman Adel , Salman Hagar , Negm Elham 
Published: January 2024

AbstractSupercritical carbon dioxide (scCO2) has been suggested as a good substitution to environmentally harmful water-based tincturing. The present study describes the successful synthesis of some biologically active dispersion tinctures for supercritical carbon dioxide tincturing of polyester fabric. The coupling of 1-cyanoacetylpiperidine (1) with the diazonium salt of aryl amine derivatives (2a–d) produced 1-((aryldiazenyl) cyanoacetyl piperidines (3a–d). To create the derivatives of 4-(phenyldiazenyl)-5-(piperidin-1-yl)-1H-pyrazol-3-amine (5a), the propane nitriles (3a–d) were condensed with hydrazine hydrate. However, the unexpected 3-aminopyrazol-5-ol yellow–red dispersion dyes (4a–d) were identified as the reaction results. The MS, IR, and NMR spectra were used to describe the novel dyes, and the results exactly matched the suggested structures. The antibacterial test, which was conducted using the AATCC method, revealed that some of the compounds (3a–d) and (4a–d) had impressive antibacterial capabilities against the researched +ve and gram −ve bacteria. For eight dyestuffs, the dyeability, color strength, and color fastness of the tincturing process were evaluated. The evaluation focused on determining color uptake using a gauge for color strength (K/S). All dyes displayed excellent rubbing, washing, and light fastness (color change and staining grade of 4–5).
Hybrid parameters for fluid identification using an enhanced quantum neural network in a tight reservoir
Authors: Luo Dejiang , Liang Yuan , Yang Yuanjun , Wang Xingyue 
Published: January 2024

AbstractThis paper proposes a fluid classifier for a tight reservoir using a quantum neural network (QNN). It is difficult to identify the fluid in tight reservoirs, and the manual interpretation of logging data, which is an important means to identify the fluid properties, has the disadvantages of a low recognition rate and non-intelligence, and an intelligent algorithm can better identify the fluid. For tight reservoirs, the logging response characteristics of different fluid properties and the sensitivity and relevance of well log parameter and rock physics parameters to fluid identification are analyzed, and different sets of input parameters for fluid identification are constructed. On the basis of quantum neural networks, a new method for combining sample quantum state descriptions, sensitivity analysis of input parameters, and wavelet activation functions for optimization is proposed. The results of identifying the dry layer, gas layer, and gas–water co-layer in the tight reservoir in the Sichuan Basin of China show that different input parameters and activation functions affect recognition performance. The proposed quantum neural network based on hybrid parameters and a wavelet activation function has higher fluid identification accuracy than the original quantum neural network model, indicating that this method is effective and warrants promotion and application.
Risk of cardiocerebrovascular diseases is increased in Korean women with polycystic ovary syndrome: a nationwide cohort study
Authors: Ryu Ki-Jin , Park Hyuntae , Kim Min Sun , Jeong Hye Gyeong , Kim Tak 
Published: January 2024

AbstractTo investigate the relationship between polycystic ovary syndrome (PCOS) and risk of cardiocerebrovascular disease in Korean women. This longitudinal cohort study using data from the Korean National Health Insurance Service included the women aged 15–44 years diagnosed with PCOS between 2002 and 2019, and the controls were matched 1:3 by age group, income, and region of residence. The endpoint outcomes of this study were the occurrence of ischemic heart disease, cerebrovascular diseases, and combined cardiocerebrovascular diseases in the PCOS and control groups. A stratified Cox proportional hazards regression analysis for matched data was performed to evaluate the relative hazard of events in the PCOS group compared to that in the control group. Among a total of 549,400 participants in the cohort, 137,416 women had a diagnosis of PCOS and 412,118 women did not have it. During a median follow-up of 54 months (interquartile range, 30–78 months), the incidence rates of all cardiovascular, ischemic heart, and cerebrovascular diseases were 6.6, 4.0, and 2.9, respectively, per 1000 person-years for women with PCOS, and 4.8, 2.8, and 2.3, respectively, per 1000 person-years for healthy control women. Women with PCOS had a higher hazard ratio of 1.224 (95% confidence interval, 1.18–1.27) of the composite cardiocerebrovascular diseases than those in the controls after propensity score matching for confounding variables, including body mass index, diabetes mellitus, hypertension, dyslipidemia, physical exercise level, alcohol consumption, current smoking, systolic and diastolic blood pressures, total cholesterol, and triglyceride levels. Hazard ratio for ischemic heart and cerebrovascular diseases was higher in women with PCOS than in the control group (hazard ratio, 1.254; 95% confidence interval, 1.20–1.31 and hazard ratio, 1.201; 95% confidence interval, 1.14–1.27, respectively). PCOS is associated with an increased risk of cardiocerebrovascular diseases in Korean women irrespective of their obesity. Counselling on the management of long-term risk of cardiovascular diseases should be offered to women with PCOS in East Asian countries where PCOS is characterized by a relatively low BMI.
Diagnosis of disease affecting gait with a body acceleration-based model using reflected marker data for training and a wearable accelerometer for implementation
Authors: Takallou Mohammad Ali , Fallahtafti Farahnaz , Hassan Mahdi , Al-Ramini Ali , Qolomany Basheer , Pipinos Iraklis , Myers Sara , Alsaleem Fadi 
Published: January 2024

AbstractThis paper demonstrates the value of a framework for processing data on body acceleration as a uniquely valuable tool for diagnosing diseases that affect gait early. As a case study, we used this model to identify individuals with peripheral artery disease (PAD) and distinguish them from those without PAD. The framework uses acceleration data extracted from anatomical reflective markers placed in different body locations to train the diagnostic models and a wearable accelerometer carried at the waist for validation. Reflective marker data have been used for decades in studies evaluating and monitoring human gait. They are widely available for many body parts but are obtained in specialized laboratories. On the other hand, wearable accelerometers enable diagnostics outside lab conditions. Models trained by raw marker data at the sacrum achieve an accuracy of 92% in distinguishing PAD patients from non-PAD controls. This accuracy drops to 28% when data from a wearable accelerometer at the waist validate the model. This model was enhanced by using features extracted from the acceleration rather than the raw acceleration, with the marker model accuracy only dropping from 86 to 60% when validated by the wearable accelerometer data.
Entropy analysis of MHD hybrid nanoparticles with OHAM considering viscous dissipation and thermal radiation
Authors: Waseem Farwa , Sohail Muhammad , Ilyas Nida , Awwad Emad Mahrous , Sharaf Mohamed , Khan Muhammad Jahangir , Tulu Ayele 
Published: January 2024

AbstractThis research explores the 3-D flow characteristics, entropy generation and heat transmission behavior of nanofluids consisting of copper and titanium in water as they flow across a bidirectional apparent, while considering the influence of magneto-hydrodynamics. The thermophysical properties of nanofluids are taken advantage of utilizing the Tiwari and Das demonstrate. The concept of the boundary layer has facilitated the comprehension of the physical ideas derived from it. By applying requisite transformations, the connected intricate sets of partial differential equation have been converted into ordinary differential equation. The modified model is calculated employing the widely recognized technique known as OHAM by using Mathematica program BVPh2.0 Software. For different dimensionless parameters computational and graphical investigations have been performed. It is notice that as fluid parameters change, they exhibit distinct responses in comparison to the temperature, velocity profiles and entropy generation. The results show that velocity profile rise with greater estimates of the magnetic parameter and the rate of entropy formation. Furthermore, thermal profiles become less significant as Eckert and Prandtl numbers increase.
A comparative observational study of carbohydrate intake and continuous blood glucose levels in relation to performance in ultramarathon
Authors: Inamura Naho , Taniguchi Hirokazu , Yoshida Shiori , Nishioka Masato , Ishihara Kengo 
Published: January 2024

AbstractUltra-endurance events have gained global participation, whereas the critical factors of competition results remain to be well elucidated. This study used a nutritional approach to evaluate the association of competition results with carbohydrate intake and blood glucose control during a 100-mile ultramarathon. This observational study was conducted in the 2021 LAKE BIWA 100, which covered 100 miles (169 km) and 10,500 m elevation. The course was divided into 9 segments by aid station. According to the competition results, 22 participants (18 men and 4 women) were divided into higher finishers (n = 7), lower finishers (n = 9), and non-finishers (n = 6). The participants self-recorded their overall dietary intake throughout the race. Glucose levels were monitored every 15 min by a flash glucose monitoring system. Running speed in each segment was standardized to the average of the top five finishers for each gender. Among finishers, the carbohydrate intakes were significantly higher in the higher finishers than in the lower finishers during overall segments, especially in the first half of the race (p < 0.05). There was a significant positive correlation between running speed and carbohydrate intake in the lower finishers (rho = 0.700, p = 0.036). Two-way ANOVA analysis revealed that lowering glucose levels in each segment were more frequently observed in the lower finishers compared to the higher finishers (p = 0.012). Compared to the higher finishers, the lower finishers exhibited significantly greater fluctuations (⊿highest-lowest) in glucose levels (p < 0.001). The fluctuations in glucose levels were significantly and negatively correlated with the running speed of the finishers (rho =  − 0.612, p = 0.012). Faster runners consume high amounts of carbohydrates and maintain glucose levels during the 100-mile ultramarathon on the trail, especially at the beginning. Lowering and fluctuating glucose levels during the race are associated with lower running speed in endurance athletes.
Nylon fiber waste as a prominent adsorbent for Congo red dye removal
Authors: Hamad Kareem H. , Yasser Ahmed M. , Nabil Radwa , Tarek Raneem , Hesham Eslam , El-telbany Ahmed , Saeed Ahmed , Selim Salah E. , Abdelhamid Ahmed E. 
Published: January 2024

AbstractIn this research nylon fibers wastes (NF) were fabricated into porous sheet using a phase inversion technique to be utilized as an adsorbent materials for Congo red dye (CR). The fabricated sheet denoted as NS was characterized using FTIR and XRD. The surface studies of the adsorbent materials using SEM and BET analysis reveals a highly pores structure with an average pore volume 0.61 cc/g and BET surface area of 767 m2/g. The adsorption studies of fabricated NS were employed into CR at different parameters as pH, effect of time and dye concentration. The adsorption isotherm and kinetic studies were more fit to Langmuir and pseudo second order models. The maximum adsorption capacity qmax reached 188 mg/g with removal percentage of 95 for CR concentration of 400 mg/L at pH 6 and 0.025 g NS dose for 10 ml CR solution. The regeneration study reveals a prominent adsorption behavior of NS with removal % of 88.6 for CR (300 mg/L) after four adsorption desorption cycles. Effect of incorporation of NaonFil Clay to NS was studied using Response Surface Methodology (RSM) modeling and reveals that 98.4% removal of CR could be achieved by using 19.35% wt. of fiber with 8.2 g/L dose and zero clay, thus at a predetermined parameters studies of NanoFil clay embedded into NS, there are no significant effect for %R for CR.
Homozygous substitution of threonine 191 by proline in polymerase η causes Xeroderma pigmentosum variant
Authors: Ricciardiello Roberto , Forleo Giulia , Cipolla Lina , van Winckel Geraldine , Marconi Caterina , Nouspikel Thierry , Halazonetis Thanos D. , Zgheib Omar , Sabbioneda Simone 
Published: January 2024

AbstractDNA polymerase eta (Polη) is the only translesion synthesis polymerase capable of error-free bypass of UV-induced cyclobutane pyrimidine dimers. A deficiency in Polη function is associated with the human disease Xeroderma pigmentosum variant (XPV). We hereby report the case of a 60-year-old woman known for XPV and carrying a Polη Thr191Pro variant in homozygosity. We further characterize the variant in vitro and in vivo, providing molecular evidence that the substitution abrogates polymerase activity and results in UV sensitivity through deficient damage bypass. This is the first functional molecular characterization of a missense variant of Polη, whose reported pathogenic variants have thus far been loss of function truncation or frameshift mutations. Our work allows the upgrading of Polη Thr191Pro from ‘variant of uncertain significance’ to ‘likely pathogenic mutant’, bearing direct impact on molecular diagnosis and genetic counseling. Furthermore, we have established a robust experimental approach that will allow a precise molecular analysis of further missense mutations possibly linked to XPV. Finally, it provides insight into critical Polη residues that may be targeted to develop small molecule inhibitors for cancer therapeutics.
In situ and bio-green synthesis of silver nanoparticles immobilized on zeolite as a recyclable catalyst for the degradation of OPDs
Authors: Zhou Fujiang , He Danfeng , Ren Guojian , Yarahmadi Hossein 
Published: January 2024

AbstractIn this study, silver nanoparticles (Ag-NPs) were synthesized using a green and biologically inspired approach by utilizing reducing compounds from Thyme plant leaves. Zeolite was used to immobilize the synthesized Ag-NPs (Ag@Z). The modified Zeolite served as a catalyst for the reduction reaction of various organic pollutant dyes (OPDs) including 4-nitrophenol (4-NP), 4-nitroaniline (4-NA), methylene blue (MB), and methyl orange (MO) with sodium borohydride. The degradation of OPDs was monitored by measuring changes in their maximum absorption wavelength intensity. A thorough examination of multiple parameters (catalyst, silver and sodium borohydride dosage, yield degradation, and reaction time) was carried out to identify the optimized conditions for the degradation of OPDs. The results showed that the Ag@Z catalyst achieved an efficiency of over 93% in less than 10 min for the degradation of OPDs. The recoverability and reusability of the catalyst were examined, revealing a partial loss in efficiency after four recovery stages. Structural analysis using XRD, SEM, and TEM techniques confirmed the characteristics and morphology of the synthesized catalyst.
Clinical outcomes associated with antidepressant use in inflammatory bowel disease patients and a matched control cohort
Authors: Ba Djibril M. , Yadav Sanjay , Liu Guodong , Leslie Douglas L. , Vrana Kent E. , Coates Matthew D. 
Published: January 2024

AbstractAntidepressant medications (AMs) are frequently used in inflammatory bowel disease (IBD). Many AMs enhance serotonin (5-HT) availability, but this phenomenon may actually worsen IBD. We hypothesized that use of 5-HT-enhancing AMs would be associated with poor clinical outcomes in these disorders. We performed a retrospective cohort study using the Merative Health Marketscan® commercial claims database between 1/1/05 and 12/31/14. Participants (18–63 years) were either controls or had ≥ 2 ICD-9 diagnoses for IBD with ≥ 1 year of continuous insurance enrollment before index diagnosis and 2 years after. We identified new AM prescriptions using the medication possession ratio. Primary outcomes were corticosteroid use (IBD-only), IBD-related complication (IBD-only), IBD-related surgery (IBD-only), hospitalization, and emergency department (ED) visit(s) within 2 years of diagnosis or starting AM. We calculated adjusted hazard ratios (aHRs) in IBD AM users (for each outcome). We also performed subgroup analyses considering IBD and AM subtype. In the IBD cohort (n = 29,393, 41.4% female; 42.2%CD), 5.2% used AMs. In IBD, AM use was independently associated with corticosteroid use, ED visits, and hospitalizations, but not IBD-related complications. AM use was associated with a decreased risk of surgery. In the control cohort (n = 29,393, 41.4% female), AM use was also independently associated with ED visits and hospitalizations, and there was an increased likelihood of these two outcomes compared to the IBD cohort. In conclusion, while AM use was independently associated with an increased risk of ED visits and hospitalization in IBD, these risks were statistically more common in a matched control cohort. Additionally, AM use was associated with reduced risk of surgery in IBD, demonstrating a potential protective role in this setting.
Quantum interference of pulsed time-bin entanglement generated from silicon ring resonator
Authors: Ono Takafumi , Tsujimoto Yoshiaki , Wakui Kentaro , Fujiwara Mikio 
Published: January 2024

AbstractWe demonstrate a pulsed operation of an entangled photon pair source that is based on a silicon ring resonator. Time-bin entangled photon pairs at telecommunication wavelengths are generated via spontaneous four-wave mixing, which is excited by a pulsed pump laser. The entanglement between the generated photon pair is analyzed by using asymmetric Mach–Zehnder interferometers followed by single-photon detectors, resulting in non-classical interference with a visibility exceeding a classical limit. The reason for the degradation of the interference visibility is discussed using the theoretical model with experimental parameters. Our experimental results show successful pulsed generation of entanglement, which represents an important step towards a synchronized quantum network based on silicon photonics.