bluuebunny/crossref_metadata_2025_split huggingface dataset:
First Report of Phoma herbarum and Phoma exigua as Pathogens of Dandelion in Southern Ontario
Authors: Neumann Brebaum S. , Boland G. J. 
Published: May 2007

Diseases of dandelion (Taraxacum officinale) were surveyed in southern Ontario from 1993 to 1997 to identify promising pathogens for biological weed control. Two new pathogens of dandelion, Phoma herbarum Westend. and Phoma exigua Desm., were recovered and characterized from small necrotic lesions on dandelion foliage. Both Phoma spp. were frequently isolated from multiple locations and during various years of the survey, indicating that they were endemic and widespread on T. officinale in southern Ontario. Pathogenicity was assessed by inoculating detached leaves or seedlings with colonized agar disks (6 mm in diameter) or spore suspensions (1 × 106 conidia per ml). Inoculated leaves and seedlings were incubated at 22°C and 48 h of continuous leaf wetness. Lesion diameters were measured 3 days post-inoculation. Isolates that gave rise to necrotic lesions were reisolated from leaves and grown in pure culture. Their growth characteristics were compared with those of the initial isolate. Spores were ellipsoid, hyaline, and 5 × 2 μm for both species. Identification of representative isolates of both species was confirmed by the Centraalbureau voor Schimmelcultures, Oosterstraat 1, 3742 SK Baarn, The Netherlands. This is the first report of these two species as pathogens of dandelion in North America (1,2). References: (1) I. L. Conners 1967. An Annotated Index of Plant Diseases in Canada. Research Branch, Canada Dept. Agric. Pub.1251. (2) D. F. Farr et al. 1989. Fungi on Plants and Plant Products in the United States. American Phytopathological Society, St. Paul, MN.
First Report of Sinaloa Tomato Leaf Curl Geminivirus in Costa Rica
Authors: Idris A. M. , Rivas-Platero G. , Torres-Jerez I. , Brown J. K. 
Published: May 2007

In October 1998, geminivirus-like symptoms were widespread in tomato plantings near Turrialba, Costa Rica. Isolates from several fields were experimentally transmitted to tomato seedlings with whiteflies from a Bemisia tabaci (Genn.) colony maintained at CATIE, which resulted in interveinal chlorosis and leaf curling symptoms indistinguishable from those observed in the field. Total DNA was extracted from leaves of 16 of these experimentally inoculated plants and assayed by polymerase chain reaction (PCR) for the presence of begomovirus DNA with the degenerate primers AV324 and AC889 (2) to amplify the core region of the coat protein gene (core Cp). PCR yielded the expected size core Cp fragment (576 bp) from 16 of 16 samples. The core Cp fragments of six samples were cloned and sequenced. A comparison of the core Cp sequences with reference begomovirus sequences indicated all Costa Rican isolates were >95% identical to Sinaloa tomato leaf curl geminivirus reported in 1994 from Sinaloa, Mexico (STLCV-SINALOA). Virus identity was confirmed by multiple sequence alignments of the viral coat protein gene (Cp) and the common region (CR) sequences of A and B components (CR-A and CR-B), respectively, with analogous reference begomovirus sequences. Cp and CRs were obtained by PCR, and amplicons were cloned and sequenced as described (1). The Cp open reading frame (ORF; 756 nucleotides) (AF110515) identified within the A component amplicon shared 92.9% sequence identity with STLCV-SINALOA Cp (AF040635). The CR sequences of the A (AF1150516) and B (AF110517) components (163 nucleotides) shared 98.2% sequence identity with each other, suggesting that they were amplified from the cognate A and B components of the same virus. Further, the CR-A and CR-B components contained the same putative Rep binding site, TGGGGT-AA-TGGGGT, which was also identical to that of STLCV-SINALOA. The mean percent divergences between viral Cp and CR amplicons (n = 6+) ranged from 98 to 100%. Collectively, STLCV-like symptoms in tomato, >92% identity between viral Cp sequences, and identical CR iterons indicate that the Costa Rican tomato virus is STLCV, or a closely related strain. This is the first report of an STLCV-like begomovirus in tomato in Costa Rica (STLCV-CR). References: (1) A. M. Idris and J. K. Brown. Phytopathology 88:648, 1998. (2) S. D. Wyatt and J. K. Brown. Phytopathology 86:1288, 1996.
First Report of Chino del Tomate and Pepper Hausteco Geminivurses in Greenhouse-Grown Tomato in Sonora, Mexico
Authors: Idris A. M. , Lee S. H. , Brown J. K. 
Published: May 2007

Tomato plants grown in commercial greenhouses in Sonora, Mexico, developed either yellow mosaic, leaf curling, and stunting (phenotype 1; 20 to 35%) or chlorosis and a feathery appearance of leaves (phenotype 2; 15 to 25%) in December 1997 and again in October 1998. Polymerase chain reaction (PCR) with diagnostic primers (prAV324 and prAC889) that amplify an approximately 576-bp fragment of the coat protein (CP) gene of whitefly-transmitted geminiviruses indicated the presence of a begomovirus. Biolistic inoculation of tomato seedlings with RNase-treated extracts of three symptomatic tomato samples, each, resulted in reproduction of disease symptoms. With PCR primers prAV2644 and prAC1154 (1), the entire CP (approximately 776 bp) and its flanking sequences were amplified from extracts of symptomatic tomato, and amplicons were cloned and sequenced. Comparisons of a minimum of three CP gene sequences from each phenotype revealed the presence of at least two begomoviruses. The phenotype 1-associated CP gene shared 92.6, 86.2, and 85.3% identity with the CP sequence of chino del tomate (CdTV) [AF106936], tomato mottle, and abutilon mosaic geminiviruses, respectively. The CP sequence associated with phenotype 2 was 94.6, 77.1, and 77.1% identical to pepper hausteco (PHV) [X70418], bean golden mosaic-Guatemala (BGMV-GU), and Texas pepper (TPV) gem-iniviruses, respectively. Previously, CdTV was reported from tomato in Chiapas, Morelos, Sinaloa, and Tamaulipas, Mexico, while PHV has been identified in Guanajuato, Quintana Roo, Sinaloa, and Tamaulipas, Mexico, and in Texas (2). This is the first report of CdTV-like (>92% identity) and PHV-like (>94% identity) geminiviruses associated with greenhouse-grown tomatoes in Sonora, Mexico. References: (1) A. M. Idris and J. K. Brown. Phytopathology 88:648, 1998; (2) I. Torres-Pacheco et al. Phytopathology 86:1186, 1996.
First Report of Bean Leafroll Luteovirus Infecting Pea in Italy
Authors: Larsen R. C. , Webster D. M. 
Published: May 2007

Approximately 5,000 ha of processing peas (Pisum sativum L) are cultivated annually in the Po River Valley of northern Italy. During the 1998 growing season, affected pea plants in this region were observed that exhibited mild chlorosis and mottling, leaf rolling, and stunting symptoms. High aphid populations and disease levels of nearly 100% were observed in susceptible varieties. Samples from affected fields were analyzed for the presence of bean leafroll virus (BLRV). Nonviruliferous pea aphids (Acyrthosiphon pisum Harris) received a 48-h acquisition access period on symptomatic leaves. Aphids were then transferred to Puget pea and Diana faba bean for a 72-h inoculation access period. Leaf samples were also macerated in 0.05 M potassium phosphate pH 7.4, and inoculated mechanically to pea, faba bean, chickpea (Cicer arietinum L.), Chenopodium quinoa Willd., and C. amaranticolor Coste & Reyn. Symptoms typical of those observed in the original field plants appeared 10 to 14 days after aphid transmissions in both pea and faba bean inoculated with pea aphids. No symptoms were observed in any of the hosts that were inoculated mechanically. Total nucleic acid extracts from the original pea samples, and from leaf tissue of pea and faba bean plants inoculated with aphids, served as templates in reverse-transcriptase polymerase chain reaction assays. Primers BLR-V157 and BLR-C546, which flanked a 400-bp fragment, were designed with available sequence data for the coat protein gene of BLRV (1). An amplification product of the expected size was generated from symptomatic plants but not from healthy controls. Sequence analysis of the cloned fragments revealed a 99% nucleic acid homology with the published sequence for BLRV and an isolate obtained from alfalfa in Washington State (R. Larsen, unpublished). This is the first report of BLRV in Italy. Reference: (1) B. Brill et al. Nucleic Acids Res. 18:5544, 1990.
Cayaponia tibiricae: New Host of Zucchini Yellow Mosaic Virus in Brazil
Authors: Yuki V. A. , Rezende J. A. M. , Kitajima E. W. , Barroso P. A. V. , Kuniyuki H. , Groppo G. A. , Pavan M. A. 
Published: May 2007

Cayaponia tibiricae Cogn. (CT) is a wild Cucurbitaceae species found in secondary forests in the State of São Paulo, Brazil. The species has indefinite growth and bears oblong dark green fruits, 15 to 20 mm long (1,2). CT plants showing yellow mosaic symptoms were found in Atibaia County. Extracts from symptomatic plants were rub inoculated to zucchini squash (Cucurbita pepo L.) and Chenopodium amaranticolor Coste & Reyn. Zucchini squash plants developed severe yellow mosaic with intense leaf malformation, while C. amaranticolor showed necrotic local lesions. Extracts from naturally infected CT, zucchini squash, and C. amaranticolor were tested by plate trapped antigen-enzyme-linked immunosorbent assay (PTA-ELISA) with antisera against papaya ringspot virus type W (PRSV-W), zucchini yellow mosaic virus (ZYMV), zucchini lethal chlorosis virus (ZLCV), watermelon mosaic virus 2 (WMV-2), and cucumber mosaic virus (CMV). All samples were positive in PTA-ELISA only with ZYMV antiserum. Also, in Western blot (immunoblot) assay, ZYMV antiserum labeled a protein of approximately 36 kDa. Electron microscopic examination of ultrathin sections from infected CT tissue revealed the presence of pinwheel inclusions typical of potyvirus (type 1) infection in the cytoplasm of the cell. CT seedlings were susceptible to mechanical inoculation with the ZYMV isolated from this species. This is the first report of CT as a natural host for ZYMV in Brazil. References: (1) A. Cogniaux. Flora Brasiliensis 6:1, 1878. (2) M. Pio Corrêa. 1926. Diccionário das plantas úteis do Brasil e das exóticas cultivadas. Vol 1. Ministério da Agricultura, Rio de Janeiro, Brazil.
First Confirmation of Phytophthora lateralis in Europe
Authors: Hansen E. M. , Streito Jean-Claude , Delatour Claude 
Published: May 2007

Phytophthora lateralis, a pathogen of Chamaecyparis lawsoniana (Port-Orford cedar or Lawson's cypress), was confirmed in France, but isolates from Germany identified as P. lateralis or “similar to” P. lateralis proved to be P. gonapodyides. Previously, P. lateralis was known only from western North America, where it has been destructive in nurseries, ornamental plantings, and the forest since its introduction about 1920 (1). Reports from other locations have proved to be misidentifications or impossible to confirm. In France, P. lateralis was isolated and identified from C. lawsoniana on two occasions (1996 and 1998) in different parts of the country, probably stemming from a single original infestation of young, potted, greenhouse-propagated cedars in a commercial nursery. German isolates were from an old culture collection and from irrigation water in a nursery growing a wide range of woody ornamentals. Identifications were confirmed by comparison (2) with authentic isolates. P. lateralis isolates from France and Oregon formed laterally proliferating, elongated obpyriform sporangia that under the conditions of our tests could be dislodged by agitation, leaving a short pedicel. Also, brown chlamydospores formed laterally on the hyphae or terminally on a short stalk and oospores were not formed on standard media. Radial growth was about 2 mm per day. In contrast, sporangia of German isolates and known P. gonapodyides isolates were similar. They exhibited nested pro liferation, were broader than P. lateralis sporangia, and were not readily dehiscent. Some P. gonapodyides isolates, including those from Germany, formed chlamydospores, but these were nearly all catenulate and not lateral, and isolates grew faster (3 to 4 mm per day). Pathogenicity was tested by stem inoculation of C. lawsoniana. P. lateralis from France and Oregon produced lesions averaging 4.7 cm after 2 months (range 2.0 to 8.1 cm, six replicates per isolate, five isolates) while the six replicates of the two German isolates averaged 1.2- and 1.6-cm lesion lengths. Furthermore, sequences of internal transcribed spacer (ITS) DNA from French and Oregon P. lateralis isolates were identical, while sequences of German isolates were similar to P. gonapodyides (J. Duncan and D. Cooke, personal communiation). P. lateralis is a dangerous pathogen of C. lawsoniana and is also pathogenic to Taxus spp. (1), although less aggressive on this host. If established, it would be a serious threat to the widespread ornamental plantings and scattered forest plantations of C. lawsoniana in Europe. References: (1) E. M. Hansen and K. J. Lewis. Compendium of Conifer Diseases. American Phytopathological Society, 1997. (2) C. M. Tucker and J. A. Milbrath. Mycologia 34:94, 1942.
Yellow Vine of Watermelon and Pumpkin in Tennesse
Authors: Bost S. C. , Mitchell F. L. , Melcher U. , Pair S. D. , Fletcher J. , Wayadande A. , Bruton B. D. 
Published: May 2007

Yellow vine (YV) is a recently recognized decline of cucurbits expressed as plant yellowing, phloem discoloration, and death of vines as fruit approach maturity. In severely affected fields, YV incidence can range from 50 to 100% with similar yield loss. The disease has been associated with a phloem-limited, walled bacterium belonging to the gamma-3-proteobacteria (1), for which specific polymerase chain reaction (PCR) primers have been developed and used in diagnosis (2). First observed in 1988 in Oklahoma and Texas squash and pumpkin, YV was not detected in watermelon and cantaloupe until 1991. The disease has never been detected in cucumber. Efforts to date have been unsuccessful in transmitting the disease with dodder, grafting, or selected insects. Initially, the geographic range of the disease appeared to be generally confined to central and northeastern Oklahoma and north central Texas, an area known as the Cross Timbers Region. In 1997 to 1998, YV was diagnosed in commercial fields of watermelon and muskmelon from east Texas (Post Oak Savannah) and all cucurbit-growing areas of Oklahoma. In late summer 1998, symptoms similar to those of YV were observed in one watermelon (Hardeman County) and three pumpkin (Rhea and Morgan counties) fields in Tennessee where the leaves turned yellow and chlorotic and affected plants exhibited phloem discoloration. Estimated incidence of YV ranged from less than 1 to 20% of the plants in affected fields. PCR, with the YV-specific primers (2), amplified a band of the expected size (409 bp) from all watermelon and pumpkin plants exhibiting phloem discoloration. In contrast, no bands were amplified from asymptomatic (no phloem discoloration) watermelon or pumpkin. The nucleotide sequence of the DNA fragment amplified from a Tennessee watermelon and pumpkin plant was identical to that of the YV bacterium. The occurrence of YV outside of the Cross Timbers Region, and in a location as distant as Tennessee, suggests that the disease may be much more widespread than previously recognized. Diagnosis and monitoring of YV in all cucurbit-growing areas is critical for determining the geographic distribution and losses caused by this emerging disease. References: (1) F. J. Avila et al. Phytopathology 88:428, 1998. (2) U. Melcher et al. (Abstr.) Phytopathology. 89(suppl.):S95, 1999.
First Report of Dothistroma septospora on Native Limber and Whitebark Pine in Montana
Authors: Taylor J. E. , Walla J. A. 
Published: May 2007

Dothistroma septospora (Doroguine) Morelet (= Dothistroma pini Hulbary), the anamorph of Mycosphaerella pini Rostr. in Munk, has been reported to cause needle blight in 29 Pinus species and hybrids in North America, including limber pine (P. flexilis James) in plantings in Kansas, Nebraska, and Ohio. We are unaware of any reports of D. septospora on limber or whitebark pine (P. albicaulis Engelm.) growing within their native ranges in the western United States. In June 1997, limber and whitebark pine in Montana were observed with severe defoliation and symptoms typical of those caused by D. septospora: affected second- and third-year needles were green at the base with brown tips or reddish-brown spots or bands, and black fruiting bodies in discolored portions of needles. Symptomatic needles were collected in natural stands of limber pine at 22 locations representing 15 counties in central, south-central, and southwestern Montana, and whitebark pine at three locations representing two counties in the Crazy Mountains in south-central Montana. Approximately 20 needles and five stromata from each location were examined with dissecting and compound microscopes to observe morphological features. Stromata were black, linear, 150 to 1450 μm (average 650 μm) by 65 to 450 μm (average 190 μm), subepidermal, and erumpent. Conidiophores were hyaline and unbranched. Conidia were 16.0 to 23.5 μm (average 18.5 μm) by 3.0 to 4.1 μm (average 3.4 μm), hyaline, 3 to 5 septate, blunt at the ends, and slightly falcate. The fungus described above was found at all sample locations. The teleomorph, M. pini, was not observed. Symptom expression and mycological characteristics were consistent with Hulbary's lectotype (1) of D. pini (= D. septospora). This is the first report of D. septospora on limber and whitebark pine within the hosts' native ranges. Reference: (1) R. L. Hulbary. Ill. Nat. Hist. Surv. Bull. 21:231, 1941.
First Report of Soybean Cyst Nematode (Heterodera glycines) on Soybean in Puerto Rico
Authors: Smith J. R. , Chavarria-Carvajal J. A. 
Published: May 2007

Soybean (Glycine max (L.) Merr.) winter nurseries have been planted in Puerto Rico at the USDA's Isabela farm for 25 consecutive years. The field has had one soybean crop each year, with a summer fallow period between winter nursery seasons. In February 1998, during an inspection of root nodulation, cysts were discovered on roots of an F2 population (Benning × Pureunkong). Microscopic examination of roots confirmed the presence of female nematodes of Heterodera glycines Ichinohe in various stages of development. No cysts were found when soil and roots were randomly sampled at various growth stages (R1 to R7) from other soybean fields in Puerto Rico (Isabela, Salinas, Lajas, and Juana Diaz). Also, no cysts were observed on roots of common bean (Phaseolus vulgaris) at growth stages R7 to R8 in a neighboring research field. However, cysts were observed on 35-day-old roots of soybean cv. Lee, common bean, and pigeon pea (Cajanas cajun) grown in the above infested soil. A race assay, slightly modified from standard protocols (3), determined that the infested soil contained race 2 of H. glycines. The infested field was rotated to sorghum during the summer of 1998 and then soybeans were planted in the 1998-1999 winter nursery. H. glycines occurs in at least 26 states of the U.S., and in Canada, Asia, and South America (1,2). References: (1) M. L. Mendes and D. W. Dickson. Plant Dis. 77:499, 1993. (2) R. D. Riggs and D. P. Schmitt. 1989. Soybean Cyst Nematode. Page 65 in: Compendium of Soybean Diseases. 3rd ed. J. B. Sinclair and P. A. Backman, eds. American Phytopathological Society, St. Paul, MN. (3) D. P. Schmitt and G. Shannon. Crop Sci. 32:275, 1992.
Occurrence of a Subpopulation of Xanthomonas oryzae pv. oryzae with Virulence to Rice Cv. IRBB21 (Xa21) in Southern India
Authors: Priyadarisini V. Brindha , Gnanamanickam S. S. 
Published: May 2007

About 200 isolates of the bacterial blight pathogen Xanthomonas oryzae pv. oryzae were obtained from infected rice (Oryza sativa L.) leaf samples from the Palghat District of Kerala State in southern India during January and February, 1998, when there was a severe epidemic of bacterial blight in the farmers' fields. One hundred and forty of these isolates were assayed for pathogenicity on rice cv. IR24 (no R gene), IRBB21 (Xa21), and NH56 (Xa4+xa5+xa13+Xa21) at their maximum tillering stage by the standard clip-inoculation technique (1) at the Regional Agricultural Research Station (Kerala Agricultural University), Pattambi. In two separate experiments, all the isolates were found to be pathogenic to IR24, producing lesions greater than 10 cm in length. None of the isolates induced susceptible symptoms on cv. NH56 and the average lesion length was less than 2 cm. Twenty of the 140 isolates, however, showed virulence to IRBB21 (seeds supplied by S. R. McCouch, Cornell University, and by P. Ronald, University of California-Davis) and induced lesions of 10.0 to 18.0 cm. We report here the presence of Indian races of X. oryzae pv. oryzae that are virulent to IRBB21 (Xa21), contradicting an earlier report of avirulence (2). These results suggest that the deployment of Xa21 alone will not be a sound strategy for the management of bacterial blight in southern India. References: (1) S. S. Gnanamanickam et al. Plant Dis. 78:173, 1994. (2) G.-L.Wang et al. Mol. Plant-Microbe Interact. 9:850, 1996.
Fairy Rings in Turf Associated with the Bird's Nest Fungus Cyathus stercoreus
Authors: Mercier J. , Carson T. D. , White D. B. 
Published: May 2007

During the summer of 1998, several fairy rings with the fruiting bodies of a bird's nest fungus were observed on two greens at the University of Minnesota turf plots in St. Paul. Both greens, a 3-year-old annual bluegrass green and a 2-year-old creeping bentgrass green, were constructed of a 90% sand: 10% reed sedge peat soil mix. The fungus was identified as Cyathus stercoreus (Schwein.) de Toni (Nidulariaceae) (1). The fruiting bodies were approximately 15 mm tall and 8 mm wide. The fairy rings were irregular in shape, with a diameter of up to 50 cm, and contained up to 120 fruiting bodies per ring. On annual bluegrass, chlorotic and necrotic grass was observed at the edge of the rings in July but those damaged areas recovered in August. No symptoms were associated with the rings in creeping bentgrass. Rings were first discovered in June and early July and expanded by about 10 cm in 30 days. New fruiting bodies appeared during July and August as the rings expanded. The application of the fungicide chorothalanil did not affect the rings. This is the first report of a bird's nest fungus associated with fairy ring in turf. Reference: (1) H. J. Brodie. 1975. The Bird's Nest Fungi. University of Toronto Press, Toronto.