bluuebunny/crossref_metadata_2025_split huggingface dataset:
Supplementation with vitamin D improves the embryo quality in in vitro fertilization (IVF) programs, independently of the patients’ basal vitamin D status
Authors: Baldini Giorgio Maria , Russo Michele , Proietti Sara , Forte Gianpiero , Baldini Domenico , Trojano Giuseppe 
Published: April 2024

Abstract
Purpose
The study aims to demonstrate the effects of Vitamin D (VD) supplementation, prior to oocyte pick-up within IVF protocols, in women with diverse VD status at the enrollment.

Methods
A total of 204 women eligible for intra-cytoplasmatic sperm injection (ICSI) cycles were included in the study and two homogeneous groups were selected from the database. Both group of patients with normal VD baseline level (> 40 ng/ml) and patients with low VD baseline level (< 20 ng/ml) were divided into control group and treatment group. The control group followed the standard procedure. The treatment group was supplemented with vitamin D3 as cholecalciferol in combination with Myo-Inositol, folic acid, and melatonin 3 months before standard procedure, once a day in the evening.

Results
VD levels significantly increased in the study group of low baseline VD, both in serum and in the follicular fluid compared to controls. The treatment induced a significant improvement of the embryo quality in both group of patients considered.

Conclusion
Supplementation of VD in patients undergoing ICSI procedures significantly improved the number of top-quality embryos compared with the control group, either starting from VD normal baseline values or starting from low values.

Trial registration number
07/2018.
Change in brain activation after transcranial pulsed electromagnetic fields in treatment-resistant depression
Authors: van Belkum Sjoerd M. , Opmeer Esther M. , Geugies Hanneke , de Boer Marrit K. , Schoevers Robert A. , Aleman André 
Published: April 2024

Abstract
Background
Preliminary evidence suggests antidepressant effects of transcranial pulsed electromagnetic fields (tPEMF). However, the precise mechanism of action in the brain is still unknown. The aim of this study was to investigate the influence of tPEMF on brain activation in patients with treatment-resistant depression (TRD) by studying two processes that might be of particular interest in relation to the symptoms of depression: emotional processing and reward processing.

Methods
Eligible participants (n = 50) with TRD in this sham-controlled double-blind multicenter trial [registered at the Dutch Trial Register (http://www.trialregister.nl), NTR3702] were randomly assigned to five weeks daily active or sham tPEMF. Pre- and post-treatment functional MR-scans were made during which participants performed a social-emotional task and a reward task.

Results
Participants in the active treatment group showed a stronger decrease in activation post-treatment compared to sham during reward-outcome processing in the left inferior frontal gyrus and in a cluster comprising the right lingual gyrus and the posterior part of the middle temporal gyrus. No effect of tPEMF was found on activation during the social-emotional task. Neurostimulation with tPEMF did also not affect behavioral performance for both tasks.

Conclusions
We found a decrease in reward-related activation as a result of tPEMF stimulation, while no effect of tPEMF on social-emotional processing was found. The treatment-related reduction in activation of regulatory regions may reflect normalization and may have implications for anhedonia. These findings suggest that there is an effect of tPEMF on brain activation of relevant circuits, albeit in the absence of a clinical antidepressant effect.
Endothelial receptor proteins in acute venous thrombosis and delayed thrombus resolution in cerebral sinus vein thrombosis
Authors: Kellermair Lukas , Höfer Christoph , Zeller Matthias W. G. , Kubasta Christa , Bandke Dave , Weis Serge , Kellermair Jörg , Forstner Thomas , Helbok Raimund , Vosko Milan R. 
Published: April 2024

Abstract
Background and purpose
Cerebral sinus venous thrombosis (CSVT) is a rare but life-threatening disease and its diagnosis remains challenging. Blood biomarkers, including D-Dimer are currently not recommended in guidelines. Soluble endothelial receptor proteins (sICAM-1, sPECAM-1 and sVCAM-1) have been shown to be promising diagnostic biomarkers in deep vein thrombosis (DVT) and pulmonary embolism (PE). Therefore, we examined endothelial receptor proteins as potential biomarkers for detecting CSVT.

Methods
In this bi-centre, prospective study, we quantified D-Dimer as well as sICAM-1, sPECAM-1 and sVCAM-1 in plasma of patients with clinically suspected CSVT managed in the neurological emergency department (ED) of a tertiary care hospital. All patients underwent cerebral magnetic resonance imaging (MRI) and were followed up after 3, 6 and 12 months to detect thrombus resolution.

Results
Twenty-four out of 75 (32%) patients with clinically suspected CSVT presenting with headache to the ED were diagnosed with acute CSVT. These patients had a mean age of 45 ± 16 years and 78% were female. In patients with CSVT, mean baseline D-dimer (p < 0.001) and sPECAM-1 (p < 0.001) were significantly higher compared to patients without CSVT. The combination of D-Dimer and sPECAM-1 yielded the best ROC-AUC (0.994; < 0.001) with a negative predictive value of 95.7% and a positive predictive value of 95.5%. In addition, higher baseline sPECAM-1 levels (> 198 ng/ml) on admission were associated with delayed venous thrombus resolution at 3 months (AUC = 0.83).

Conclusion
sPECAM-1 in combination with D-Dimer should be used to improve the diagnostic accuracy of acute CSVT and sPECAM-1 may predict long-term outcome of CSVT. Confirmatory results are needed in other settings in order to show their value in the management concept of CSVT patients.
Photoprotection by photoinhibitory and PSII-reaction centre quenching controls growth of Ulva rigida (Chlorophyta) and is a pre-requisite for green tide formation
Authors: Rautenberger Ralf , Hurd Catriona L. 
Published: April 2024

Abstract
Main Conclusion
The combined photoinhibitory and PSII-reaction centre quenching against light stress is an important mechanism that allows the green macroalga Ulva rigida to proliferate and form green tides in coastal ecosystems.

Abstract
Eutrophication of coastal ecosystems often stimulates massive and uncontrolled growth of green macroalgae, causing serious ecological problems. These green tides are frequently exposed to light intensities that can reduce their growth via the production of reactive oxygen species (ROS). To understand the physiological and biochemical mechanisms leading to the formation and maintenance of green tides, the interaction between inorganic nitrogen (Ni) and light was studied. In a bi-factorial physiological experiment simulating eutrophication under different light levels, the bloom-forming green macroalga Ulva rigida was exposed to a combination of ecologically relevant nitrate concentrations (3.8–44.7 µM) and light intensities (50–1100 µmol photons m−2 s−1) over three days. Although artificial eutrophication (≥ 21.7 µM) stimulated nitrate reductase activity, which regulated both nitrate uptake and vacuolar storage by a feedback mechanism, nitrogen assimilation remained constant. Growth was solely controlled by the light intensity because U. rigida was Ni-replete under oligotrophic conditions (3.8 µM), which requires an effective photoprotective mechanism. Fast declining Fv/Fm and non-photochemical quenching (NPQ) under excess light indicate that the combined photoinhibitory and PSII-reaction centre quenching avoided ROS production effectively. Thus, these mechanisms seem to be key to maintaining high photosynthetic activities and growth rates without producing ROS. Nevertheless, these photoprotective mechanisms allowed U. rigida to thrive under the contrasting experimental conditions with high daily growth rates (12–20%). This study helps understand the physiological mechanisms facilitating the formation and persistence of ecologically problematic green tides in coastal areas.
Prognostic utility and characteristics of MIB-1 labeling index as a proliferative activity marker in childhood low-grade glioma: a retrospective observational study
Authors: Gorodezki David , Zipfel Julian , Bevot Andrea , Nägele Thomas , Ebinger Martin , Schuhmann Martin U. , Schittenhelm Jens 
Published: April 2024

Abstract
Purpose
The prognostic utility of MIB-1 labeling index (LI) in pediatric low-grade glioma (PLGG) has not yet conclusively been described. We assess the correlation of MIB-1 LI and tumor growth velocity (TGV), aiming to contribute to the understanding of clinical implications and the predictive value of MIB-1 LI as an indicator of proliferative activity and progression-free survival (PFS) in PLGG.

Methods
MIB-1 LI of a cohort of 172 nonependymal PLGGs were comprehensively characterized. Correlation to TGV, assessed by sequential MRI-based three-dimensional volumetry, and PFS was analyzed.

Results
Mean MIB-1 LI accounted for 2.7% (range: < 1–10) and showed a significant decrease to 1.5% at secondary surgery (p = .0013). A significant difference of MIB-1 LI in different histopathological types and a correlation to tumor volume at diagnosis could be shown. Linear regression analysis showed a correlation between MIB-1 LI and preoperative TGV (R2 = .55, p < .0001), while correlation to TGV remarkably decreased after incomplete resection (R2 = .08, p = .013). Log-rank test showed no association of MIB-1 LI and 5-year PFS after incomplete (MIB-1 LI > 1 vs ≤ 1%: 48 vs 46%, p = .73) and gross-total resection (MIB-1 LI > 1 vs ≤ 1%: 89 vs 95%, p = .75).

Conclusion
These data confirm a correlation of MIB-1 LI and radiologically detectable TGV in PLGG for the first time. Compared with preoperative TGV, a crucially decreasing correlation of MIB-1 LI and TGV after surgery may result in limited prognostic capability of MIB-1 LI in PLGG.
Risk factors for neurophysiological events related to intraoperative halo-femoral traction in spinal deformity surgery
Authors: Berends Hanneke I. , Stadhouder Agnita , van Royen Barend J. , Journée Henricus L. , Gouw Alida A. 
Published: April 2024

Abstract
Purpose
This study identifies risk factors for neurophysiological events caused by intraoperative halo-femoral traction (IOHFT) in patients with adolescent idiopathic scoliosis (AIS), and neuromuscular scoliosis (NMS).

Methods
Neurophysiological integrity was monitored using motor evoked potentials (MEPs). IONM event was defined as a decreased MEP amplitude of more than 80% of baseline in, at least, one muscle. Time between application of IOHFT and event, affected muscles, surgical stage, and time between removal of IOHFT and recovery of MEPs were described. Characteristics (age, height, weight, diagnosis, Cobb angle, and flexibility of the curve) of patients with and without IOHFT-events were compared using analysis of variance. Binary logistic regression analyses were performed to identify predictors.

Results
The study included 81 patients (age 15.6 ± 2.4 years, 53 females, AIS: n = 47, NMS n = 34). IOHFT-events occurred in 11 patients (13%; AIS n = 4, NMS n = 7). IOHFTevents affecting all limbs occurred pre-incision in NMS. Events affecting only the legs occurred during all stages of surgery. Patients with IOHFT-events were smaller (p = 0.009) and had stiffer curves (p = 0.046). Height was a predictor (odds ratio, 0.941; 95% confidence interval = 0.896–0.988). All MEPs recovered after removing IOHFT.

Conclusion
Neurophysiologic events due to IOHFT were common, with the majority in patients with NMS. A shorter stature was a risk factor, and larger Cobb angle and stiffer curve were associated with IOHFT-events. Events occurred at any stage of surgery and involved upper and lower limbs. With an adequate response on IOHFT events, none of the patients had postoperative neurological impairments due to IOHFT.
Antibacterial activity of a short de novo designed peptide against fish bacterial pathogens
Authors: Bhat Raja Aadil Hussain , Khangembam Victoria C. , Pant Vinita , Tandel Ritesh Shantilal , Pandey Pramod Kumar , Thakuria Dimpal 
Published: April 2024

AbstractIn the face of increasing antimicrobial resistance in aquaculture, researchers are exploring novel substitutes to customary antibiotics. One potential solution is the use of antimicrobial peptides (AMPs). We aimed to design and evaluate a novel, short, and compositionally simple AMP with potent activity against various bacterial pathogens in aquaculture. The resulting peptide, KK12YW, has an amphipathic nature and net charge of + 7. Molecular docking experiments disclosed that KK12YW has a strong affinity for aerolysin, a virulence protein produced by the bacterial pathogen Aeromonas sobria. KK12YW was synthesized using Fmoc chemistry and tested against a range of bacterial pathogens, including A. sobria, A. salmonicida, A. hydrophila, Edwardsiella tarda, Vibrio parahaemolyticus, Pseudomonas aeruginosa, Escherichia coli, Staphylococcus epidermidis, and methicillin-resistant S. aureus. The AMP showed promising antibacterial activity, with MIC and MBC values ranging from 0.89 to 917.1 µgmL−1 and 3.67 to 1100.52 µgmL−1, respectively. In addition, KK12YW exhibited resistance to high temperatures and remained effective even in the presence of serum and salt, indicating its stability. The peptide also demonstrated minimal hemolysis toward fish RBCs, even at higher concentrations. Taken together, these findings indicate that KK12YW could be a highly promising and viable substitute for conventional antibiotics to combat microbial infections in aquaculture.
Secular trends in risk factors for adolescent anxiety and depression symptoms: the Young-HUNT studies 1995–2019, Norway
Authors: Krokstad Morten Austheim , Sund Erik , Rangul Vegar , Bauman Adrian , Olsson Craig , Bjerkeset Ottar 
Published: April 2024

AbstractIn recent decades, increases in mental health problems in adolescents have been reported from several large population-based surveys. This raises questions about changes in underlying risk and protective factors that can inform future intervention strategies. Population data were collected from 1995 to 2019 in three waves of the Young-HUNT studies in Norway to map decennial trends in the prevalence of established risk factors for, and their associations with, adolescent mental health problems. All adolescents (aged 13–19 years) attending lower and upper secondary school in the county of Trøndelag were invited, representing three historical cohorts of 25,245 unique adolescents. Mental health problems (HSCL-5) and established mental health risk factors were self-reported. Using a generalized linear model and linear regression, we calculated changes in relative and absolute differences between risk factors and mental health problems. Overall, the prevalence of established risk factors for mental health problems in adolescence increased markedly between 1995 and 2019, especially in girls. Prominent increases were observed for fatigue, bullying, musculoskeletal pain and migraine, loneliness, and overweight. Furthermore, with the exception of excess alcohol use and family economy, associations between each risk factor and adolescent mental health problems strengthened over the same time span in girls, but less among boys. Our findings suggest that several modifiable risk factors for poor mental health in adolescence are increasing, especially among girls, and should be targeted in community, school, and in clinical settings.
Estimating seepage losses from lined irrigation canals using nonlinear regression and artificial neural network models
Authors: Selim Tarek , Elshaarawy Mohamed Kamel , Elkiki Mohamed , Eltarabily Mohamed Galal 
Published: April 2024

AbstractThe Slide2 model was used to estimate seepage losses from canals after validation considering different canal geometries, lining thicknesses, and lining materials. SPSS was used to develop three models: NLR, MLP-ANN, and RBF-ANN. MATLAB software was used to write down the script code for the ANNs. Results showed that seepage losses were highly increased when the liner had high hydraulic conductivity, while with the increase of lining thickness, a noticeable reduction in seepage losses was obtained. The canal's side slope had a minimal effect on the seepage losses. Moreover, the MLP-ANN and RBF-ANN models performed better than the NLR model with determination coefficient (R2) of 0.996 and 0.965; Root-Mean-Square-Error (RMSE) of 1.172 and 0.699; Mean-Absolute-Error (MAE) of  0.139 and 0.528; index of agreement (d) = 0.999 and 0.991, respectively. The NLR model had lower values of R2 = 0.906, RMSE = 1.198, MAE = 0.942, and d = 0.971. Thus, ANNs are recommended as a robust, easy, simple, and rapid tool for estimating seepage losses from lined trapezoidal irrigation canals.
New insights into estimating the cementation exponent of the tight and deep carbonate pore systems via rigorous numerical strategies
Authors: Rostami Alireza , Helalizadeh Abbas , Moghaddam Mehdi Bahari , Soleymanzadeh Aboozar 
Published: April 2024

AbstractOne of the main constituents of any reservoir characterization is an accurate forecast of water saturation, which is highly dependent upon the cementation exponent. Even though there have been a lot of studies, the most common correlations depend on total porosity. This means that they do not work as well in heterogeneous carbonate reservoirs, especially tight formations with total porosities less than 10%. This study aims to develop accurate and universal models for estimating the cementation exponent in deep and tight carbonate pore systems located in West Asia. Two heuristic algorithms, including the radial basis function neural network optimized by ant colony optimization (RBFNN-ACO) and gene expression programming (GEP), were employed to calculate the cementation exponent. To do this, we prepared a databank incorporating cementation exponents, total porosity, and various pore types. Then, the databank is classified into the test subset (for model prediction checking) and the train subset (for model construction). The reliability of the new recommended models is inspected by applying several statistical quality measures associated with graphical analyses. So, the consequences of the modeling disclose the large precision of the above-mentioned RBFNN-ACO, GEP Model-I, and GEP Model-II by average absolute percentage relative deviations (AAPRD%) of 6.28%, 6.39%, and 7.45%, respectively. Based on the outliers analysis, nearly 95% of the databank and model estimations are, respectively, valid and reliable. Additionally, the three input variables, including moldic porosity (with a + 70% impact value), non-fabric-selective dissolution (connected) porosity (with a -30% impact value), and interparticle porosity (with a -23% impact value), exhibit the main affecting parameters on the cementation exponent. Comparing current results with traditional literature correlations demonstrates the supremacy of the RBFNN-ACO model (AAPRD = 6.28% and root mean squared error (RMSE) = 0.17) over the examined literature correlations such as Borai’s equation (AAPRD = 12.30% and RMSE = 0.41). In addition, RBFNN-ACO can give better results than Borai’s Eqn. for tight (porosity less than 10%) and deep carbonate samples.
Microscopic enrichment and porosity-permeability reduction mechanism of residual oil in tight sandstone reservoirs: an insight from Chang 8 Member, Yanchang Formation, Ordos Basin, China
Authors: Zhou Qianshan , Liu Jiangyan , Zhang Dongwei , Li Chao , Xiao Yueye , Chen Guojun , Lyu Chengfu 
Published: April 2024

AbstractThis study delves into the micro-occurrence states and enrichment mechanisms of residual oil, pivotal for advancing the production from tight sandstone reservoirs, particularly from the Chang 8 Member of the Upper Triassic Yanchang Formation, Ordos Basin. Through an analysis of 23 core samples, employing high-pressure mercury injection, field emission scanning electron microscopy, thin section, and X-ray diffraction techniques, distinct reservoir types were categorized. The utilization of environmental scanning electron microscope, multi-solvent continuous extraction, and an oil components separation system facilitated an intricate analysis of residual oil micro-occurrence states and their subsequent effects on porosity and permeability reduction across varying reservoir types. The findings accentuate the integral role of reservoir type in determining residual oil distribution within tight sandstone reservoirs. Favorable pore throat sorting and connectivity in specified reservoir types are identified as conducive to residual oil enrichment with a higher concentration of light components. In contrast, elevated carbonatite and clay content in other reservoir types leads to adsorption of heavy components, disrupting pore throat connectivity, and impeding crude oil filling. The varied interactions between oil and rock, oil–oil, and pore throat sealing significantly impact the distribution of oil components of residual oil, culminating in a notable reduction of porosity and permeability by 2.63% and 0.197 mD, with corresponding reduction rates of 27.19% and 46.69%, respectively. The insights derived from this study furnish a theoretical foundation for augmenting tight oil recovery and comprehending the enrichment mechanism of residual oil driven by the heterogeneity of tight sandstone reservoirs.
Exploring the antioxidant potential of endophytic fungi: a review on methods for extraction and quantification of total antioxidant capacity (TAC)
Authors: Asomadu Rita Onyekachukwu , Ezeorba Timothy Prince Chidike , Ezike Tobechukwu Christian , Uzoechina Jude Obiorah 
Published: April 2024

AbstractEndophytic fungi have emerged as a significant source of natural products with remarkable bioactivities. Recent research has identified numerous antioxidant molecules among the secondary metabolites of endophytic fungi. These organisms, whether unicellular or micro-multicellular, offer the potential for genetic manipulation to enhance the production of these valuable antioxidant compounds, which hold promise for promoting health, vitality, and various biotechnological applications. In this study, we provide a critical review of methods for extracting, purifying, characterizing, and estimating the total antioxidant capacity (TAC) of endophytic fungi metabolites. While many endophytes produce metabolites similar to those found in plants with established symbiotic associations, we also highlight the existence of novel metabolites with potential scientific interest. Additionally, we discuss how advancements in nanotechnology have opened new avenues for exploring nanoformulations of endophytic metabolites in future studies, offering opportunities for diverse biological and industrial applications.