bluuebunny/crossref_metadata_2025_split huggingface dataset:
First Report of Colletotrichum gloeosporioides Causing ‘Twister Disease’ of Onion (Allium cepa) in Georgia
Authors: Nischwitz C. , Langston D. , Sanders H. F. , Torrance R. , Lewis K. J. , Gitaitis R. D. 
Published: May 2008

In the fall of 2007, onion seedlings with twisted and distorted leaves were observed in seedbeds in multiple fields in the Vidalia onion region of Georgia. Tests for viruses and bacteria were negative and chemical injury was deemed improbable because of disease distribution in the fields. Upon further investigation, fungal fruiting bodies were observed on the outside sheath of a few of the seedlings. Symptomatic plants were cut into 1-cm segments and surface sterilized in 70% ethanol for 3 min. After rinsing in sterile water, the segments were placed onto potato dextrose agar amended with tetracycline. The fungus isolated from symptomatic plants fit the description of Colletotrichum gloeosporioides (Penz.) Penz. & Sacc. Conidia were aseptate, cylindrical, and hyaline. Sequencing of the internal transcribed spacer region and a BLAST search in GenBank (99% sequence similarity to C. gloeosporioides accessions) confirmed the identification. Ten onion seedlings were spray inoculated with a suspension of 1 × 107 spores/ml until runoff, and four seedlings were inoculated with water as negative controls. Plants were bagged for 12 h to maintain high relative humidity. Five plants were placed in the greenhouse and five plants placed in a growth chamber at 22°C. All plants inoculated with C. gloeosporioides developed distorted and twisted leaves 3 weeks after inoculation in the growth chamber and 5 weeks after inoculation in the greenhouse. Night time temperatures in the greenhouse (15°C) were lower than those in the growth chamber (22°C). Seedlings inoculated with water showed no symptoms. The fungus was reisolated from symptomatic plants. C. gloeosporioides has been reported to cause a disease called twister on onion in tropical regions (1). The fall of 2007 was unusually warm with maximum temperatures reaching 26°C during the day. The pathogen is present on many crops in the United States, but to our knowledge, this is the first report of C. gloeosporioides causing twister disease of onion in the United States. In Nigeria and Brazil, yield losses as much as 100% were observed in fields with infected onions (1). The impact of infection on the growth of the transplants and subsequent yield in Vidalia onions is currently unknown. References: (1) J. P. Hill. Compendium of Onion and Garlic Diseases. 2nd ed. The American Phytopathological Society, St. Paul, MN, 2008.
First Report of Cucumber mosaic virus on Lavandula angustifolia in Poland
Authors: Kobyłko T. , Dańda P. , Hasiów B. , Borodynko N. , Pospieszny H. 
Published: May 2008

Lavandula angustifolia Mill. (synonym Lavandula officinalis Chaix), belonging to the Lamiaceae family, is a plant that is widespread in Mediterranean countries. The species is widely grown as an ornamental crop in Poland. Currently, only Alfalfa mosaic virus (AMV) is known to infect L. latifolia × L. officinalis in Italy (3). In the spring of 2005, we observed yellow mottling, leaf deformation, and growth reduction of L. angustifolia plants from the Agricultural Academy of Kraków collection of medicinal herbs and spices. Mechanical inoculation of a range of indicator plant species, Chenopodium quinoa, Cucumis sativus, Datura strammonium, Nicotiana glutinosa, N. tabacum cv. Xanthi, Lycopersicon esculentum, and Spinacia oleracea, with sap from symptomatic L. angustifolia plants resulted in symptoms typical of Cucumber mosaic virus (CMV). Chlorotic local lesions and systemic mosaic were observed after a few days on the tested plant species. However, local lesions did not develop on inoculated C. sativus cotyledons. A lack of systemic infection on Chenopodium quinoa excluded infection by AMV. The sap from symptomatic N. tabacum cv. Xanthi leaves contained spherical virus particles of 29 nm in diameter when examined with electron microscopy. Symptomatic N. tabacum cv. Xanthi leaves were positive for CMV in a double-antibody-ELISA using commercial CMV antiserum (Loewe Biochemica GmbH, Sauerlach, Germany). Total RNA was extracted from infected N. tabacum cv. Xanthi plants by the phenolchloroform method. Reverse transcription-PCR was carried out using specific primers CMVF 5′-CCCACAGGTAGAATCAAAT-3′ and CMVR 5′-ATGGACAAATCTGAATCAAC-3′ (1). The 367-bp amplicon representing a portion of the coat protein gene located in RNA3 was cloned into pGEM-T Easy Vector (Promega, Madison, WI) and two clones were sequenced. The fragment sequence (Accession No. EU303304) was compared with homologous sequences of CMV isolates from the GenBank database. Multiple sequence alignment was performed by using Mega 4 (Center for Evolutionary Functional Genomics, Tempe, AZ) (4) and revealed 99% nucleotide and amino acid identity between the Polish isolate of CMV-PL and the RT67 (subgroup II) isolate from the Netherlands (2) To our knowledge, this is the first report on the occurrence of CMV on Lavandula angustifolia Mill. in Poland or worldwide. References: (1) N. Borodynko et al. Prog. Plant Protect. 44:604, 2004. (2) Z. Deyong et al. J Virol. Methods 123:101, 2005. (3) L. Giunchedi et al. Phytopathol. Mediterr. 11:74, 1972. (4) K. Tamura et al. Mol. Biol. Evol. 24:1596, 2007.
First Report of ‘Candidatus Phytoplasma asteris’-Related Strains Infecting Lily in Mexico
Authors: Cortés-Martínez N. E. , Valadez-Moctezuma E. , Zelaya-Molina L. X. , Marbán-Mendoza N. 
Published: May 2008

In recent years, lily (Lilium spp.) has become an important ornamental crop in diverse regions of Mexico. Since 2005, unusual symptoms have been observed on lily plants grown from imported bulbs in both greenhouse and production plots at San Pablo Ixayo, Boyeros, and Tequexquinauac, Mexico State. Symptoms included a zigzag line pattern on leaves, dwarfism, enlargement of stems, shortened internodes, leaves without petioles growing directly from bulbs, air bulbils, death of young roots, atrophy of flower buttons, and flower abortion. Symptoms were experimentally reproduced on healthy lily plants by graft inoculation. Total DNA was extracted from 50 diseased, 10 symptomless, and 10 graft-inoculated plants by the method of Dellaporta et al. (2). DNA samples were analyzed for phytoplasma presence by two different nested PCR assays. One assay employed ribosomal RNA gene primer pair P1/P7 followed by R16F2n/R16R2 (1), whereas ribosomal protein (rp) gene primer pairs rpF1/rpR1 and rp(I)F1A/rp(I)R1A (4) were used in a second assay. A DNA fragment approximately 1.2 kb long was consistently amplified from all symptomatic plant samples only by both assays. A comparative analysis of 16S rDNA sequences (Genbank Accession Nos. EF421158–EF421160 and EU124518–EU124520) and rp gene sequences (EU277012–EU277014), derived from PCR products, revealed that phytoplasma infecting lily were most similar (99.9% to 16S rDNA and 99.7% to rp) to carrot phytoplasma sp. ca2006/5 and also were similar (99.8% to 16SrDNA and 99.2% to rp) to broccoli phytoplasma sp. br273. Both carrot and broccoli phytoplasmas were classified as members of aster yellow 16S rDNA restriction fragment length polymorphism subgroup 16SrI-B (3). Although infection of lilies by aster yellows (‘Ca. phytoplasma asteris’) subgroup 16SrI-B and 16SrI-C was reported from the Czech Republic and Poland, to our knowledge, this is the first report of ‘Ca. phytoplasma asteris’-related strains associated with lily plants in Mexico. References: (1) R. F. Davis et al. Microbiol. Res. 158:229, 2003. (2) S. L. Dellaporta et al. Plant Mol. Biol. Rep. 1:19, 1983. (3) B. Duduk et al. Bull. Insectol. 60 2:341, 2007. (4) I.-M. Lee et al. Int. J. Syst. Evol. Microbiol. 54:337, 2004.
First Report of Black Rot on Arugula Caused by Xanthomonas campestris pv. campestris in Argentina
Authors: Romero A. M. , Zapata R. , Montecchia M. S. 
Published: May 2008

During the fall of 2005, arugula (Eruca sativa Mill.) plants grown in experimental field plots in Buenos Aires, Argentina presented V-shaped necrotic lesions on leaf margins and blackened veins with broad yellow halos, followed by leaf necrosis. At flowering, 96% of the plants were affected with 27% of the leaves with symptoms. Yellow, round, mucoid, convex, bacterial colonies were isolated from several leaves on yeast dextrose chalk agar. Two strains were further studied. Xanthomonas campestris pv. campestris Xcc8004 was used as a control. Strains were gram negative, rod shaped, strictly aerobic, catalase-positive, oxidase and urease-negative, hydrolyzed starch, gelatine and aesculin, and did not reduce nitrate (2). Pathogenicity was tested by spraying 10 3-week-old arugula plants with either a bacterial suspension (107 CFU/ml) or sterile water. Plants were placed in plastic bags for 72 h after inoculation. All inoculated plants showed necrotic lesions enlarging from the margin of the leaves 7 days after inoculation. No lesions were observed on control plants. On the basis of biochemical characterization (2) and genomic fingerprints generated by BOX-PCR (1), the pathogen was identified as X. campestris pv. campestris. To our knowledge, this is the first report of X. campestris pv. campestris causing black rot on arugula in Argentina. References: (1) J. L. Rademaker et al. Int. J. Syst. Evol. Microbiol. 50:665, 2000. (2) N. W. Schaad et al. Laboratory Guide for Identification of Plant Pathogenic Bacteria. 3rd ed. The American Phytopathological Society, St. Paul, MN, 2001.
First Report of Maize streak virus Field Infection of Sugarcane in South Africa
Authors: van Antwerpen T. , McFarlane S. A. , Buchanan G. F. , Shepherd D. N. , Martin D. P. , Rybicki E. P. , Varsani A. 
Published: May 2008

Prior to the introduction of highly resistant sugarcane varieties, Sugarcane streak virus (SSV) caused serious sugar yield losses in southern Africa. Recently, sugarcane plants with streak symptoms have been identified across South Africa. Unlike the characteristic fine stippling and streaking of SSV, the symptoms resembled the broader, elongated chlorotic lesions commonly observed in wild grasses infected with the related Maize streak virus (MSV). Importantly, these symptoms have been reported on a newly released South African sugarcane cultivar, N44 (resistant to SSV). Following a first report from southern KwaZulu-Natal, South Africa in February 2006, a survey in May 2007 identified numerous plants with identical symptoms in fields of cvs. N44, N27, and N36 across the entire South African sugarcane-growing region. Between 0.04 and 1.6% of the plants in infected fields had streak symptoms. Wild grass species with similar streaking symptoms were observed adjacent to one of these fields. Potted stalks collected from infected N44 plants germinated in a glasshouse exhibited streak symptoms within 10 days. Virus genomes were isolated and sequenced from a symptomatic N44 and Urochloa plantaginea plants collected from one of the surveyed fields (1). Phylogenetic analysis determined that while viruses from both plants closely resembled the South African maize-adapted MSV strain, MSV-A4 (>98.5% genome-wide sequence identity), they were only very distantly related to SSV (~65% identity; MSV-Sasri_S: EU152254; MSV-Sasri_G: EU152255). To our knowledge, this is the first confirmed report of maize-adapted MSV variants in sugarcane. In the 1980s, “MSV strains” were serologically identified in sugarcane plants exhibiting streak symptoms in Reunion and Mauritius, but these were not genetically characterized (2,3). There have been no subsequent reports on the impact of such MSV infections on sugarcane cultivation on these islands. Also, at least five MSV strains have now been described, only one of which, MSV-A, causes significant disease in maize and it is unknown which strain was responsible for sugarcane diseases on these islands in the 1980s (2,3). MSV-A infections could have serious implications for the South African sugar industry. Besides yield losses in infected plants due to stunting and reduced photosynthesis, the virus could be considerably more difficult to control than it is in maize because sugarcane is vegetatively propagated and individual plants remain within fields for years rather than months. Moreover, there is a large MSV-A reservoir in maize and other grasses everywhere sugarcane is grown in southern Africa. References: (1) B. E. Owor et al. J Virol. Methods 140:100, 2007. (2) M. S. Pinner and P. G. Markham. J. Gen. Virol. 71:1635, 1990. (3) M. S. Pinner et al. Plant Pathol. 37:74, 1998.
First Report of Phytophthora nicotianae Causing Asparagus Spear and Root Rot in Peru
Authors: Aragon-Caballero L. M. , Hurtado-Gonzales O. P. , Flores-Torres J. G. , Apaza-Tapia W. , Lamour K. H. 
Published: May 2008

During 2006, spears, roots, and crowns of asparagus (Asparagus officinalis) exhibiting brown necrotic lesions with water soaking were collected from several sites across Peru (Ica, Lima, and Trujillo). Small infected tissue sections were washed thoroughly with tap and sterile distilled water and transferred to corn meal agar plates (CMA) amended with PARP (100 ppm of pimaricin, 100 ppm of ampicillin, 30 ppm of rifampicin, and 100 ppm of pentachloronitrobenzene) and incubated for five days at 25°C. Hyphal tips were subcultured from actively expanding mycelium. Sporangia produced on CMA were papillate and averaged 38 μm long × 29 μm wide. Chlamydospores were terminal or intercalary and averaged 35 μm in diameter. Isolates incubated in the dark for more than 3 weeks did not produce oospores in single culture. Mating with Phytophthora capsici tester isolates CBS 121656 = A1 and CBS 121657 = A2 indicate that all five isolates were A2. For pathogenicity tests, inoculum was generated by incubating 300 g of autoclaved wheat seeds with four agar plugs (7 mm) of expanding mycelium in polyethylene bags for 1 month at 25°C. Nine-week-old asparagus plants (UC151 F1) were transferred into pots containing autoclaved substrate (1 part sand, 1 part potting soil, and 1 part peat). Inoculum was added as 1 g of inoculum per kilogram of substrate. Plants were maintained in the greenhouse at 23°C and watered daily. Decline symptoms as well as root and spear rot were observed after 7 days and a Phytophthora sp. was reisolated from infected tissue. No symptoms were observed on asparagus plants inoculated with sterile inoculum. DNA was isolated from two representative isolates, and the nuclear ribosomal internal transcribed spacer (ITS) region was amplified with ITS4 and ITS6 primers and sequenced. ITS sequence was submitted for a BLAST search in the NCBI database, showing Phytophthora nicotianae strain UQ848 Accession No AF266776 as the closest match with 99% sequence similarity (1). The consensus ITS sequence was deposited in NCBI (Accession No. EU433396). These results, together with the morphological characteristics, indicate that the Phytophthora sp. isolated from asparagus in Peru is P. nicotianae (Breda de Haan) (2). To our knowledge, this is the first report of P. nicotianae infecting asparagus and represents a new threat for asparagus growers in Peru. Control methods such as moderate watering and metalaxyl application are being applied to reduce Phytophthora outbreaks. References: (1) D. E. Cooke et al. Fungal Genet. Biol. 30:17, 2000. (2) D. C. Erwin and O. K. Ribeiro. Phytophthora Diseases Worldwide. The American Phytopathological Society. St Paul, MN, 1996.
The use of molecular markers of bone turnover in the management of patients with metastatic bone disease
Authors: Seibel Markus J. 
Published: May 2008

SummaryBiochemical markers of bone turnover are widely used in clinical practice. These indices have been shown to be associated with the occurrence, prognosis and therapeutic response of malignant bone lesions. For example, markers of bone resorption are often elevated in patients with established bone metastases and while this may point to a role of these markers in the diagnostic workup of cancer patients, the available evidence does not permit any final conclusions as to the accuracy and validity of the presently used markers in the early diagnosis of bone metastases. Many bone turnover markers appear to respond to antiresorptive and antineoplastic therapies, and recent evidence from prospective trials suggests that the aim of bisphosphonate therapy should be to normalize rates of bone remodelling to optimize therapeutic and prognostic outcomes. However, it remains unknown whether the use of bone markers in the routine clinical setting has any defined beneficial effects on overall outcome in cancer patients. Clearly, bone turnover markers have insufficient diagnostic or prognostic value to be used in isolation; however, the combination of these markers with other diagnostic techniques may improve clinical assessment of patients with bone‐seeking cancers. This article reviews the available evidence (as of August 2007) on the clinical use of bone turnover markers in the management of patients with metastatic bone disease.
Prevalence of metabolic syndrome (MS) in children and adolescents with varying degrees of obesity
Authors: Calcaterra V. , Klersy C. , Muratori T. , Telli S. , Caramagna C. , Scaglia F. , Cisternino M. , Larizza D. 
Published: May 2008

SummaryObjective  Childhood obesity is increasingly common and is associated with health problems; in particular, obesity plays a central role in the metabolic syndrome (MS). We estimated the prevalence of MS in Caucasian children and adolescents with varying degrees of obesity.Patients and methods  We studied 191 obese [body mass index (BMI) > 97th percentile] children and adolescents. Obesity was stratified on the basis of a threshold BMI z‐score and subjects were classified as moderately (z‐score 2–2·5) or severely obese (z‐score > 2·5). Seventy‐six, nonobese subjects were recruited into a comparison group. Thirty‐one of them were of normal weight (BMI < 75th percentile) and 45 overweight (BMI 75th–97th percentile).Patients were classified as having MS if they met three or more of the following criteria for age and sex: BMI > 97th percentile, triglyceride levels > 95th percentile, high density lipoprotein (HDL) cholesterol level < 5th percentile, systolic or diastolic blood pressure > 95th percentile and impaired glucose tolerance (blood glucose level: 7·8–11·1 mmol/l at 2 h). Insulin resistance was calculated using the homeostasis model assessment for insulin resistance (HOMA‐IR) and impaired insulin sensitivity was defined as a HOMA‐IR ≥ 2·5 in prepubertal patients and HOMA‐IR > 4 in pubertal subjects.Results  The overall prevalence of MS was 13·9% and was present in 12·0% of moderately obese and 31·1% of severely obese subjects; no overweight or normal weight subjects met the criteria for MS. The rate of the MS increased progressively with increasing BMI categories (P < 0·001). Severely obese patients had a threefold increased risk with respect to moderately obese patients.Conclusions  The prevalence of the MS is higher in obese as opposed to nonobese subjects and increases with severity of obesity.
Differential responses of circulating amylin to high‐fat vs. high‐carbohydrate meal in healthy men
Authors: Eller Lindsay K. , Ainslie Philip N. , Poulin Marc J. , Reimer Raylene A. 
Published: May 2008

SummaryObjective  The success of an amylin analogue in weight loss trials has generated interest in amylin as a physiological satiety signal. Little is known about how plasma amylin responds to macronutrients. This study examined the effects of a high‐carbohydrate meal (CHO), a high‐fat meal (FAT) or a continued fast (FAST) on amylin concentrations and correlations among other satiety hormones and measures of appetite.Design/patients  In a randomized, crossover design, 10 healthy males consumed a meal high in carbohydrate or fat or continued fasted.Measurements  Blood samples and subjective hunger scores were obtained at baseline and 30, 90 and 210 min postprandial.Results  After CHO, amylin, insulin and C‐peptide were greater and des‐acyl ghrelin lower compared to FAT (P < 0·001). Area under the curve (AUC) was greater for amylin and insulin and lower for des‐acyl ghrelin following CHO. Subjective satiety and fullness were higher for CHO and FAT than FAST at 30 and 90 min but only for CHO at 210 min (P < 0·01). Hunger and desire to eat were lower for CHO and FAT than FAST at 30 and 90 min but only for CHO at 210 min (P < 0·005). Amylin was negatively correlated to hunger, desire to eat, and nausea and positively related to satiety and insulin. Des‐acyl ghrelin was negatively associated with C‐peptide, insulin and GLP‐1 and satiety.Conclusions  CHO enhances amylin and suppresses des‐acyl ghrelin to a greater extent than FAT in healthy men. The mechanisms responsible for these changes and their implications in the physiology of satiety remain to be elucidated.
Asymmetrical thermal constraints on the parapatric species boundaries of two widespread generalist butterflies
Authors: MERCADER R. J. , SCRIBER J. M. 
Published: May 2008

Abstract 1. The sibling species Papilio glaucus and Papilio canadensis meet in a narrow hybrid zone believed to be maintained by temperature thresholds acting independently on both species. The present study tests if this assertion is true for the cold‐adapted species, P. canadensis, which is presumed to be limited by the effect of high temperatures in late summer and/or autumn on pupal survival.2. Three experiments were conducted examining the effects of: (i) short periods of high temperature stress in autumn, (ii) prolonged warm temperatures in autumn, and (iii) temperatures simulating warmer winters/longer springs upon the survival of P. canadensis and P. glaucus.3. Results indicated that short periods of high temperatures did not induce the high mortality rates required to be the key factor limiting the range of P. canadensis. However, P. canadensis did exhibit a considerably lower tolerance to high temperature extremes, prolonged warm temperatures in autumn, and conditions simulating shorter/warmer winters than P. glaucus.4. Differences in temperature tolerance throughout the pupal stage are likely to be a significant factor in maintaining the southern range limit of P. canadensis. Further warming as may occur during climate change, particularly in winter and spring, will likely affect the dynamics of southerly populations of P. canadensis.
Study comparing the double kissing (DK) crush with classical crush for the treatment of coronary bifurcation lesions: the DKCRUSH‐1 Bifurcation Study with drug‐eluting stents
Authors: Chen S. L. , Zhang J. J. , Ye F. , Chen Y. D. , Patel T. , Kawajiri K. , Lee M. , Kwan T. W. , Mintz G. , Tan H. C. 
Published: May 2008

ABSTRACTBackground  Classical crush has a lower rate of final kissing balloon inflation (FKBI) immediately after percutaneous coronary intervention (PCI). The double kissing (DK) crush technique has the potential to increase the FKBI rate, and no prospective studies on the comparison of classical with DK crush techniques have been reported.Materials and methods  Three hundred and eleven patients with true bifurcation lesions were randomly divided into classical (n = 156) and DK crush (n = 155) groups. Clinical and angiographic details at follow‐up at 8 months were indexed. The primary end point was major adverse cardiac events (MACE) including myocardial infarction, cardiac death and target lesion revascularization (TLR) at 8 months.Results  FKBI was 76% in the classical crush group and 100% in the DK group (P < 0·001). The incidence of stent thrombosis was 3·2% in the classical crush group (5·1% in without‐ and 1·7% in with‐FKBI) and 1·3% in the DK crush group. Cumulative 8 month MACE was 24·4% in the classical crush group and 11·4% in the DK crush group (P = 0·02). The TLR‐free survival rate was 75·4% in the classical crush group and 89·5% in the DK crush group (P = 0·002).Conclusions  DK crush technique has the potential of increasing FKBI rate and reducing stent thrombosis, with a further reduction of TLR and cumulative MACE rate at 8 months.