bluuebunny/crossref_metadata_2025_split huggingface dataset:
Puccinia acroptili on Russian Knapweed in Colorado, Montana, and Wyoming
Authors: Bruckart W. L. , Eskandari F. M. , Becktell M. C. , Bean D. , Littlefield J. , Pilgeram A. L. , Sands D. C. , Aime M. C. 
Published: May 2007

Acroptilon repens (L.) DC. (Russian knapweed) is a long-lived perennial weed from central Asia that is widely distributed in the western United States (U.S.). Recently, accessions of a rust disease were collected from Colorado (CO), Montana (MT), and Wyoming (WY) for comparison with Eurasian isolates. U.S. accessions had two-celled teliospores with slight constrictions in the middle and urediniospores with three germ pores ± equatorial in location. Urediniospores were (state, width × length, [n = 100]): CO, 16.4 to 25.7 × 19.2 to 27.0 μm; MT, 18.4 to 23.1 × 17.4 to 24.6 μm; and WY, 18.0 to 26.2 × 20.2 to 26.7 μm. These were similar to those of 16.6 to 25.7 × 21.2 to 28.0 μm from two New Mexican (NM) herbarium specimens (BPI Nos. 1107952 and 1110177) (1). Teliospores measured 19.9 to 27.7 × 29.8 to 47.4 μm, 17.4 to 26.0 × 32.4 to 44.2 μm, 16.5 to 27.5 × 29.4 to 45.7 μm, and 18.7 to 27.6 × 31.0 to 46.4 μm for CO, MT, WY, and NM accessions, respectively. These rust isolates have been identified as Puccinia acroptili Syd. on the basis of host plant record and spore morphology (2). To our knowledge, this is the first record of P. acroptili in CO, MT, and WY. Besides NM, P. acroptili has been reported in North America from California, British Columbia, and Saskatchewan. References: (1) M. E. Palm and S. G. Vesper. Plant Dis. 75:1075, 1991. (2) D. B. O. Savile. Can. J. Bot. 48:1567, 1970.
First Report of Soybean Rust Caused by Phakopsora pachyrhizi in North Carolina
Authors: Koenning S. R. , Moore A. D. , Creswell T. C. , Abad G. Z. , Palm M. E. , McKemy J. M. , Hernández J. R. , Levy L. , DeVries-Paterson R. 
Published: May 2007

Asian soybean rust, caused by Phakopsora pachyrhizi Sydow, has been known to occur in the eastern hemisphere for nearly a century. More recently, it was reported from South America in 2002 and the continental United States in Louisiana in November 2004 (1,2). Subsequently, P. pachyrhizi was confirmed in Alabama, Arkansas, Georgia, Florida, Missouri, Mississippi, South Carolina, and Tennessee in 2004. Surveys conducted in North Carolina in late November 2004 failed to detect this pathogen. Symptoms of the disease were first observed on soybean (Glycine max (L.) Merr.) in North Carolina on 25 October 2005 in farmers' fields in the counties of Brunswick, Columbus, and Robeson. Typical pustules and urediniospores were readily apparent on infected leaves when viewed with a dissecting microscope. Urediniospores were obovoid to broadly ellipsoidal, hyaline to pale yellowish brown with a minutely echinulate thin wall, and measured 18 to 37 × 15 to 24 μm. This morphology is typical of soybean rust caused by P. pachyrhizi or P. meibomiae, the latter is a less aggressive species causing soybean rust in the western hemisphere (1). DNA was extracted from leaves containing sori using the Qiagen DNeasy Plant Mini kit (Valencia, CA). P. pachyrhizi was detected using a real-time polymerase chain reaction (PCR) protocol that differentiates between P. pachyrhizi and P. meibomiae in a Cepheid thermocycler (Sunnyvale, CA) with appropriate positive and negative controls. The PCR master mix was modified to include OmniMix beads (Cepheid). Field diagnosis of P. pachyrhizi was confirmed by the USDA/APHIS on 28 October 2005. Soybean rust was identified in subsequent surveys of soybean fields and leaf samples submitted by North Carolina Cooperative Extension Agents in an additional 15 counties. These samples also were assayed using a traditional PCR protocol and by the enzyme-linked immunosorbent assay protocol included in the EnviroLogix QualiPlate kit (Portland, ME) for soybean rust. Ten soybean specimens from 10 sites were confirmed positive by these methods. Disease was not found on three kudzu samples, although one kudzu sample was adjacent to a soybean field that was positive for P. pachyrhizi. Although soybean rust was eventually detected in 18 North Carolina counties in 2005, no soybean yield loss occurred since the pathogen was detected when more than 80% of the soybean crop was mature. To our knowledge, this is the first report of P. pachyrhizi in North Carolina and the northern most find on soybean in the continental United States in 2005. References: (1) R. D. Frederick et al. Phytopathology 92:217, 2002. (2) R. W. Schneider et al. Plant Dis. 89:774 2005.
First Report of a Begomovirus Associated with Tomato Yellow Leaf Curl Disease in Ethiopia
Authors: Shih S. L. , Green S. K. , Tsai W. S. , Lee L. M. , Wang J. T. , Tesfaye A. 
Published: May 2007

During December 2003, severe leaf yellowing, leaf curling, and stunting symptoms were observed in tomato (Lycopersicon esculentum) plantings in Melkassa (1,550 m above sea level), Ethiopia. Eleven symptomatic samples were collected and tested for the presence of a begomovirus using polymerase chain reaction (PCR) with the begomovirus-specific degenerate primer pair PAL1v1978/PAR1c715 (3). Samples were also tested for Cucumber mosaic virus (CMV), Potato virus Y (PVY), Tobacco etch virus (TEV), Pepper veinal mottle virus (PVMV), and Tomato mosaic virus (ToMV) using enzyme-linked immunosorbent assay (ELISA). All samples were negative for CMV, PVY, TEV, PVMV, and ToMV. However, the expected 1.4-kb PCR product for begomoviruses was obtained from all samples. DNA-B and DNA-beta were not detectable using PCR with the DNA-B specific primer pairs DNABLC1/DNABLV2 and DNABLC2/ DNABLV2 (2) and the DNA-beta primer pair Beta01/Beta02 (1), respectively. The 1.4-kb PCR product of one sample was cloned and sequenced. On the basis of the sequence of the 1.4-kb DNA product, specific primers were designed to complete the DNA-A sequence. The DNA-A consisted of 2,785 nucleotides (GenBank Accession No. DQ358913) and was found to contain the six predicted open reading frames (ORFs V1, V2, C1, C2, C3, and C4). A BLAST analysis was conducted with geminivirus sequences available in the GenBank database at the National Center for Biotechnology Information (Bethesda, MD), and DNAMAN software (Lynnon Corporation, Quebec, Canada) was used for further comparisons. The DNA-A sequence of the virus associated with yellow leaf curl disease of tomato from Ethiopia showed highest sequence identity (92%) with Tomato yellow leaf curl Mali virus (TYLCMLV; GenBank Accession No. AY502934). On the basis of the DNA-A sequence comparison and the ICTV demarcation of species at 89% sequence identity, the Ethiopian virus is a provisional strain of TYLCMLV described from Mali. To our knowledge, this is the first report of a begomovirus associated with tomato yellow leaf curl disease in Ethiopia. References: (1) R. W. Briddon et al. Mol. Biotechnol. 20:315, 2002. (2) S. K. Green et al. Plant Dis. 85:1286, 2001. (3) M. R. Rojas et al. Plant Dis. 77:340, 1993.
New Polish Isolate of Pepino mosaic virus Highly Distinct from European Tomato, Peruvian, and US2 Strains
Authors: Pospieszny H. , Borodynko N. 
Published: May 2007

Pepino mosaic virus (PepMV, genus Potexvirus) was first described on pepino (Solanum muricatum) in Peru during 1980. Since 1999, the virus was reported in several European countries and in North and South America as an agent of viral disease of tomato crops. In Poland in 2002, the PepMV-SW isolate that was genetically similar to European isolates (approximately 99% identity) was identified (3). In November 2005, in the western part of the Wielkopolska Region, a virus with flexuous filamentous particles approximately 500 nm long was isolated from tomato fruits exhibiting symptoms of discoloration. Crude sap from Nicotiana benthamiana leaves was used for mechanical inoculation of indicator plants. The virus caused symptoms on N. benthamiana, N. clevelandii, Datura inoxia, and Lycopersicon esculentum. Symptomless infection on N. tabacum cv. Xanthi nc, N. tabacum cv. White Burley, and N. debneyi was confirmed by back-inoculation on N. benthamiana. The virus did not infect N. glutinosa, Physalis floridana, Petunia hybrida, Capsicum annuum, Chenopodium quinoa, Cucumis sativus, or Phaseolus vulgaris. The virus was initially identified using double-antibody sandwich enzyme-linked immunosorbent assay (DAS-ELISA) with polyclonal antiserum against PepMV (DSMZ, Braunschweig, Germany). Positive serological reactions were obtained with sap from inoculated N. benthamiana, L. esculentum, and N. clevelandii plants. The serological identification was confirmed using a reverse transcription-polymerase chain reaction (RT-PCR) with primers generated from a sequence of the RNA polymerase region of an isolate of PepMV reported in the United Kingdom (1). Sequence information obtained from the amplified fragment of the virus designated PepMV-PK (GenBank Accession No. DQ387870), showed only 81% nt identity and 89% amino acid identity with PepMV-SW (GenBank Accession No. DQ387869). PepMV isolates can be divided into three strains including European tomato, Peruvian, and US2 based on their genetic diversity (2). The PepMV-PK isolate resulted in nucleotide identities ranging from 79 to 81% with isolates of the European tomato strain (GenBank Accession Nos. AJ438767, AF340024, AF484251, AJ271991, AJ606359, and AJ290424), 81% with the Peruvian strain (GenBank Accession Nos. AM109896 and AJ606361), and 78% identity with each of the U.S. isolates US1 (GenBank Accession No. AY509926) and US2 (GenBank Accession No. AY509927). These results show that the new Polish isolate is distinct from all other PepMV isolates reported to date. References: (1) C. J. French et al. Plant Dis. 85:1121, 2001. (2) L. Pagan et al. Phytopathology 96:274, 2006. (3) H. Pospieszny et al. Phytopathol. Pol. 26:91, 2002.
First Report of Southern Blight Incited by Sclerotium rolfsii on Potato (Solanum tuberosum) in Northern Italy
Authors: Garibaldi A. , Gilardi G. , Gullino M. L. 
Published: May 2007

During the summer of 2005, plants of potato (Solanum tuberosum L.) showing severe basal rot symptoms were observed in a commercial field near Alessandria (northern Italy). The first symptoms were detected during early July in correspondence with a strong increase of air temperature (as much as 38°C, with an average monthly increase of 10°C) and relative humidity. Infected plants showed dry collar rots and extensive necrosis of cortical tissues. Leaves of infected plants were chlorotic. As the disease progressed, tubers rotted and plants wilted. Infected plants appeared in patches, encompassing 10 to 15% of the cultivated area. In the presence of abundant moisture, a white mycelium occurred on infected tissues. On their surface, infected tubers showed a fan-like mycelial growth. Later, white or light-to-dark brown sclerotia (2 to 4 mm in diameter) developed from mycelium. Clamp connections were present. The diseased tissue was disinfested for 1 min in 1% NaOCl and plated on potato dextrose agar (PDA) amended with 100 mg/liter of streptomycin sulfate. Sclerotium rolfsii was consistently isolated from infected plants. Pathogenicity of one isolate obtained from infected plants was confirmed by inoculating healthy S. tuberosum plants (cv. Hermes) grown in 2:l volume pots (1 plant per pot, seven replicates). Inoculum that consisted of 1 g/pot of wheat kernels infested with mycelium and sclerotia was placed on the soil surface. Seven noninoculated plants served as controls. The inoculation trial was repeated once. Plants were kept at temperatures ranging between 25 and 32°C and watered as needed. Inoculated plants developed symptoms of leaf yellowing within 10 days, soon followed by the appearance of white mycelium and sclerotia and then eventually wilted. Control plants remained symptomless. Sclerotium rolfsii was reisolated from inoculated plants.Possible attacks of Sclerotium rolfsii on S. tuberosum were described as rarely occurring in southern Italy (3). The disease, detected at the moment in very few farms and on cvs. Hermes and Monalisa, was particularly severe on the last variety, causing 5 to 15% yield losses because of premature plant death and rotting of tubers. This disease has been reported in several countries such as India (1), Israel (2), and the United States of America (4). References: (1) N. S. Bisht. Indian Phytopathol. 35:148, 1982. (2) Y. Elad et al. Soil Biol. Biochem. 16:381, 1984. (3) R. Gigante. Ital. Agric. 87:263, 1946. (4) G. F. Weber. Phytopathology, 33:615, 1943.
Introduction of the New World Squash leaf curl virus to Squash (Cucurbita pepo) in Egypt: A Potential Threat to Important Food Crops
Authors: Idris A. M. , Abdel-Salam A. , Brown J. K. 
Published: May 2007

Squash plants showing leaf curling, yellow mottling, and reduced fruit set were observed in fields in Giza, Egypt in spring 2005. These particular symptoms had not been observed previously in zucchini squash plants in Egypt, but were reminiscent of those caused by begomoviruses (Geminiviridae) that are known to occur in the region, including Watermelon chlorotic stunt virus. Squash plants were heavily infested with the whitefly Bemisia tabaci (Genn.), the only known vector of begomoviruses. Total nucleic acids were isolated from symptomatic squash leaves using the cetyltrimethylammoniumbromide method, and extracts were subjected to polymerase chain reaction (PCR) analysis using two sets of PCR primers. One primer set (prAV2644 and prAC1154) was designed to amplify a fragment that contains the entire viral coat protein (Cp), while the second primer set (prBV1855 and prBC656) was designed to amplify the common region (CR) of DNA-B of begomoviruses (1). The expected size fragments were cloned and the sequence was determined for five clones each. Unexpectedly, the Cp and the CR-B fragments shared their highest nucleotide sequence (nt) identity among well-characterized begomoviruses to the bipartite Squash leaf curl virus (SLCV) native to the western United States. A third primer set (prAC344 and prAV1134) (1) was subsequently used to amplify the remainder of the putative SLCV DNA-A. The fragment was cloned and the DNA sequence was determined. Assembly of the overlapping DNA-A fragments resulted in a complete DNA-A component sequence of 2,636 nt, which is identical to the expected size of the SLCV DNA-A component (GenBank Accession No. DQ285019). Comparison with the latter sequence indicated that the Egyptian squash isolate shared 98% nt identity with SLCV. The sequence for the DNA-B fragment (1,162 nt) shared 94% nt identity with SLCV and was deposited in GenBank as Accession No. DQ285020. The high-shared nt identity with SLCV (2) from the United States suggests that this isolate, herein SLCV-EG, has been introduced into Egypt. The relatively low DNA-B nt sequence identity was a not a surprise since this component is normally less conserved even between strains of a single begomoviral species. Introduction of SLCV is not only potentially significant to the domestic production of crop species in the Cucurbitaceae but also for legume crops. SLCV has a broad host range that also includes members of the Fabaceae, which includes species that contribute significant sources of protein for much of Egypt's population. The virus thus far is thought to be present only in Lower Egypt, however, it could feasibly threaten legume and cucurbit crops if it spreads to Upper Egypt. To our knowledge, this is the first begomovirus of New World origin to become established in the Old World. References: (1) A. M. Idris and J. K. Brown. Phytopathology 88:648, 1998. (2) S. G. Lazarowitz. Virology 180:70, 1991.
First Report of Nemesia ring necrosis virus in North America in Ornamental Plants from California
Authors: Mathews D. M. , Dodds J. A. 
Published: May 2007

During the last several years, two California propagators have detected what was believed to be the tymovirus Scrophularia mottle virus (ScrMV) in several ornamental plant species on the basis of enzyme-linked immunosorbent assay (ELISA) using a ScrMV antibody system. Symptoms were generally mild, ranging from nonsymptomatic to a mild mosaic. Our laboratory confirmed the presence of a tymovirus in one Verbena sp. and two Diascia spp. cultivars on the basis of dsRNA analysis that showed bands of approximately 6,400 and 300 nucleotides representing the genomic and coat protein subgenomic RNAs, respectively. While these plants and those that were experimentally infected (Nicotiana benthamiana and N. clevelandii) also tested positive for ScrMV by ELISA, the host range did not match that published for ScrMV, notably the lack of symptoms in Chenopodium quinoa and the lack of systemic infection in Datura stramonium. A similar host range result was reported in Europe for another tymovirus that cross reacts with ScrMV antiserum, Nemesia ring necrosis virus (NeRNV) (2). Using NeRNV specific primers (1), we used reverse transcription-polymerase chain reaction (RT-PCR) to test plants that had previously tested positive for ScrMV by ELISA and had dsRNAs typical of a tymovirus. An amplicon of the appropriate size (960 bp) for NeRNV was obtained from each of five samples. Using ScrMV specific primers, the same samples failed to amplify the expected product. We have found NeRNV in three Diascia spp., one Verbena sp., and one Nemesia sp. plants in two counties in California (Riverside and San Diego). When the RT-PCR products were sequenced, they all had 99% sequence identities to NeRNV with 4 to 7 single nucleotide changes (GenBank Accession Nos. DQ648150 to DQ648154). Notably, each of the five amplicons had changes at nucleotides 5134 (G to C) and 5549 (G to T) when compared with the European isolates of NeRNV, which did not result in any amino acid changes. To our knowledge, this is the first report of NeRNV in North America and more specifically, in California. References: (1) R. Koenig et al. J. Gen. Virol. 86:1827, 2005. (2) A. L. Skelton et al. Plant Pathol. 53:798, 2004.
First Report of Cochliobolus sativus on Guzmania sp. in Belgium
Authors: Crepel C. , Inghelbrecht S. , Baeyen S. , Maes M. 
Published: May 2007

In 2001 and again in December 2005, an outbreak of leaf spots was observed on Guzmania sp. ‘Gwendolyne’ (Bromeliaceae) in a Belgian nursery. Typical disease symptoms were irregular spots with a grayish center and a narrow red-brown margin. Identification was based on morphological characteristics and molecular techniques. Isolations of diseased leaf tissues previously washed with sterile distilled water on potato dextrose agar (PDA) resulted in mycelial colonies after 7 to 8 days. Fungal mycelium grew at a linear rate of 30.4 mm per 24 h at 21°C in the dark. The pathogen produced aerial mycelium and sporulation was abundant. The color of the colonies on PDA was pale to dark brown and conidial characteristics similar to those of Cochliobolus sativus (anamorph Bipolaris sorokiniana) (1) were observed: brown ellipsoidal spores rounded at the top, 3 to 12 distoseptate, with average dimensions of 40 to 120 × 17 to 28 μm. The pathogen was also characterized with molecular tools. DNA was isolated from mycelium from a PDA plate. The ribosomal DNA region ITS1-5.8S-ITS2 was amplified and cloned. The ITS1 sequences (174 bp) of two independent clones were analyzed. The three highest similarity scores (E = 2e-71) obtained in BLAST were C. sativus (GenBank Accession Nos. AF158105 and AF071329) and B. sorokiniana strain BS11 (GenBank Accession No. AY372677). For these, pairwise alignments resulted in an identical score of 97.1% (169 identical bases, four indels, and one transversion). The new Genbank Accession No. of the ITS1 sequence is DQ 641269. To prove pathogenicity of the isolate, inoculations were done by spraying leaves of three young Guzmania sp. ‘Gwendolyne’ plants with a 20-ml spore suspension (106 spores/ml). Three plants were sprayed with sterile distilled water as controls. The plants were kept for 48 h under a humid chamber and subsequently at room temperature (20 to 25°C) on the laboratory bench. Three to four days after inoculation, leaf spots were observed and C. sativus (anamorph B. sorokiniana) was reisolated, completing Koch's postulates successfully. On the basis of symptoms, morphological characteristics, and pathogenicity tests, the pathogen was identified as C. sativus (anamorph B. sorokiniana). To our knowledge, this is the first record of C. sativus (anamorph B. sorokiniana) on Guzmania sp. in Belgium. References: (1) A. Sivanesan and P. Holliday. Description of Pathogenic Fungi and Bacteria. CMI, Kew, Surrey, England, UK, 1981.
Powdery Mildew, Caused by Leveillula taurica, on Matilija Poppy in California
Authors: Koike S. T. 
Published: May 2007

Romneya coulteri, known as matilija poppy or coulter's matilija poppy, is a perennial woody shrub (family Papaveraceae) that is native to southern California and northern Mexico. The plant is used in landscape settings and has the largest flowers, measuring up to 16 cm across, of any plant native to California. In August 2006, in Monterey County, CA, landscape plants of R. coulteri were found affected with a powdery mildew disease. Initial symptoms consisted of chlorotic, irregularly shaped, vein-delimited lesions. As disease progressed, grayish white sporulation was visible on lesions on adaxial and abaxial sides of affected leaves. In advanced stages of the disease, lesions expanded up to 2 cm long and the center tissue of the lesions turned necrotic. Symptoms and signs were observed on both mature and younger foliage. The small matilija poppy planting consisted of six or seven plants and all plants were affected by the disease. Epidermal strips from both sides of leaves and leaf cross sections were mounted in drops of lactophenol and aniline blue and examined with a light microscope. These preparations showed that conidiophores developed from endophytic mycelium and emerged through stomates. Conidiophores were sometimes branched and carried one or two conidia. Hyaline, single-celled conidia were dimorphic. Primary (terminal) conidia were lanceolate with distinct apical points and measured 53 to 61 × 17 to 25 μm. Secondary conidia were ellipsoid-cylindric and measured 53 to 67 × 16 to 22 μm. On the basis of these characters, the pathogen was identified as Leveillula taurica (1). Only the anamorph Oidiopsis taurica stage was observed on plants. To prove pathogenicity, diseased leaves were collected from the landscape plantings. One diseased leaf was gently rubbed against one leaf of a potted, healthy matilija poppy. Twelve leaves were inoculated in this way, and plants were kept in a humidity chamber for 48 h and then maintained in a greenhouse (24 to 26°C). After 14 days, chlorotic lesions appeared on inoculated matilija poppy leaves and sporulation of L. taurica was observed several days later. Untreated control plants did not develop powdery mildew. The experiment was repeated and the results were the same. To my knowledge, this is the first report of powdery mildew caused by L. taurica on matilija poppy. There was no indication that the disease affected the growth of the host; however, powdery mildew reduced the quality of the appearance of this ornamental plant. Reference: (1) H. J. Boesewinkel. Bot. Rev. 46:167, 1980.