bluuebunny/crossref_metadata_2025_split huggingface dataset:
Evidence of a Naturally Occurring Recombinant Between Tomato yellow leaf curl virus and Tomato yellow leaf curl Sardinia virus in Spain
Authors: Monci F. , Navas-Castillo J. , Moriones E. 
Published: May 2007

Tomato yellow leaf curl virus (TYLCV, formerly TYLCV-Is) and Tomato yellow leaf curl Sardinia virus (TYLCSV, formerly TYLCV-Sar) are geminivirus species of the genus Begomovirus that cause the disease known as tomato yellow leaf curl. In Spain, TYLCV and TYLCSV have coexisted in field and greenhouse tomato (Lycopersicon esculentum) crops since 1996 (2). TYLCV is also the causal agent of the leaf crumple disease of common bean (Phaseolus vulgaris) (1), a species that TYLCSV is unable to infect (2). Analysis of field samples from common bean plants affected by leaf crumple disease collected in Almería (southeastern Spain) during 1999 showed that, unexpectedly, several samples hybridized with TYLCV- and TYLCSV-specific probes prepared to the intergenic region (IR) as previously described (1). Polymerase chain reactions (PCR) performed with total nucleic acids extracted from one of these samples (ES421/99) using primer pairs specific to the IR of TYLCV (MA-30/MA-31) or TYLCSV (MA-14/MA-15) (1) gave no amplification product. However, the combination of MA-30 (5′ end of TYLCV IR) and MA-15 (3′ end of TYLCSV IR) produced a PCR DNA product of the expected size (351 bp). Direct DNA sequencing of this product (GenBank Accession No. AF401478) indicated the presence of a chimeric IR in ES421/99. Comparison of the obtained sequence with those available for isolates reported from Spain showed that the 5′ side (149 nt) from the stem-loop structure conserved in the IR of all geminiviruses was 99% identical to the corresponding region of TYLCV (GenBank Accession No. AF071228) and only 62% identical to TYLCSV (GenBank Accession No. Z25751). In contrast, the 3′ side (124 nt) from the stem-loop was 98% identical to the corresponding region of TYLCSV and only 57% identical to TYLCV. The 33-nt region involved in the stem-loop was 100% identical to TYLCV and showed one nucleotide change in the loop with respect to TYLCSV. Therefore, this DNA sequence data showed evidence of the occurrence in ES421/99 of a natural recombination between TYLCV and TYLCSV. The biological and epidemiological consequences of the presence of this new interspecific recombinant have yet to be determined. References: (1) J. Navas-Castillo et al. Plant Dis. 83:29, 1999. (2) S. Sánchez-Campos et al. Phytopathology 89:1038, 1999.
Mosaic Disease of Calla Lily Caused by a New Potyvirus in Taiwan
Authors: Chang Y.-C. , Chen Y.-L. , Chung F.-C. 
Published: May 2007

In 1998, a new mosaic disease of calla lily (Zantedeschia spp.) was found in Taichung County, Taiwan. Primary symptoms were mosaic and green islands on leaves and discolored spots on flowers. Symptomatic plants were negative in double-antibody sandwich enzyme-linked immunosorbent assay (DAS-ELISA) for Dasheen mosaic virus (DsMV) polyclonal antibody (Agdia Inc., Elkhart, IN), but were positive in indirect ELISA using an anti-potyvirus group monoclonal antibody. Extracts from these plants were infective by mechanical inoculation to seedlings of calla lily and Philodendron selloum, which expressed veinal chlorosis, mosaic, and green island symptoms. Transmission electron microscopic analysis indicated that the virus particles purified from inoculated P. selloum were 695 to 845 nm long. In addition, potyvirus-specific cytoplasmic inclusions were observed in epidermal cells of infected calla lily. The 3′-terminal region of the virus was amplified by reverse-transcription polymerase chain reaction from total RNA or viral RNA using a potyvirus-specific degenerate primer and an oligo(dT) primer. A 1.6-kb amplified fragment was cloned, and three independent clones were sequenced. The sequences included a portion of NIb gene, the coat protein (CP) gene, the 3′ untranslated region (3′UTR) and the poly(A) tail. This nucleotide sequence (GenBank Accession No. AF332872) was checked against the international sequence databases using the BLAST program (provided by National Center for Biotechnology Information online at www.ncbi.nlm.nih.gov/blast/ ). The highest identity of the CP amino acid sequences between this unknown virus and other potyviruses is 68%. Amino acid sequence homologies for the CPs between individual potyviruses are 38 to 71%, while those between strains of a potyvirus are more than 90% (1). Therefore, this Zantedeschia-infecting virus is a previously undescribed potyvirus and is herein designated as Zantedeschia mosaic virus (ZaMV). In further analyses, the amino acid sequence identities of the CP gene between ZaMV and 13 other aphid-transmitted potyviruses were 46 to 61% and 9 to 23% for the nucleotide sequence of the 3′UTR. ZaMV and DsMV showed 46% identity in the CP amino acid sequence and 12% identity in the 3′UTR nucleotide sequence, indicating that they are two distinct members of the genus Potyvirus. To our knowledge, this is the first report of natural infection of Zantedeschia spp. by ZaMV, a new potyvirus identified in Taiwan. Reference: (1) D. D. Shukla and C. W. Ward. Arch. Virol. 106:171, 1989.
First Recognition of Issatchenkia orientalis in Mature Citrus Fruits in Spain
Authors: Tuset J. J. , Perucho R. 
Published: May 2007

During the first four months of 2000, mature fruit of clementine cvs. Clemenules and Hernandina, mandarin cvs. Ortanique and Fortune, and orange cv. Navelina from several packinghouses located in Valencia Province were affected by a soft, watery, colorless or very light brown decay. The incidence of the decay was 5 to 12% in clementines and mandarins and 0.2 to 0.8% in oranges. A yeast was isolated consistently on potato-dextrose agar from affected tissues and from the juice of decayed fruits. Colonies of this yeast were butyrous, light cream in color, and smooth with a dry surface (or with a flattened center) and lobed margins with sparse, branched pseudohyphae. Some isolates that were light pink in color later turned cream colored. Yeast cells were ovoid to elongate, single or in pairs, with one or two buds at one end (multilateral budding). The cells were 1.1 to 5.7 μm × 3.2 to 12.8 μm. Ascospores were not observed. Fermentation and growth on carbon sources (several carbohydrates), growth on nitrogen sources (nitrate, cadaverine, L-lysine, etc.), requirement for vitamins, and growth at 40°C were used for identification. Based on the results of such tests and morphological characteristics, the fungus was identified as Issatchenkia orientalis Kudryavtsev (anamorph: Candida krusei (Castellani) Berkhout) (2). To satisfy Koch's postulates in pathogenicity tests, cells from pure cultures on agar or in orange juice were inoculated by hypodermic injection into the peel and flesh of oranges, clementines, mandarins, grapefruits, and lemons. After 10 to 20 days in a moist chamber at 24°C, a decay resembling symptoms that occurred in the packinghouse were observed in the inoculated fruits (1,3). The lemon fruits were the most affected. The fungus reisolated from decayed fruits was identical to the original isolates. This is the first report of this yeast as a decay of citrus produced in Europe. Climatic conditions (rainfall in spring and dry in summer and autumn) in citrus-growing areas in Spain, together with the presence of the Mediterranean fruit fly, may have been factors in disease development. A similar decay is caused by Geotrichum candidum, and previously this may have been mistaken for decay caused by I. orientalis. References: (1) P. R. Harding. Plant Dis. Rep. 52:433, 1968. (2) C. D. Kurtzman. 1998. The Yeasts, A Taxonomic Study. 4th ed. Elsevier Science, Amsterdam. (3) K. V. Shankhapal and V. G. Hatwalne. Plant Dis. Rep. 60:237, 1976.
Okra (Hibiscus esculentus)—A New Host of Turnip mosaic virus in Israel
Authors: Gera A. , Lampel M. , Cohen J. , Rosner A. 
Published: May 2007

In July 1999, Hibiscus esculentus plants, grown in garden plots in Galilee, Israel, exhibited chlorosis, vein clearing accompanied by necrosis, and growth reduction. All samples (n = 10) tested positive for Turnip mosaic virus (TuMV) in enzyme-linked immunosorbent assay (ELISA), using a polyclonal antibody produced in our laboratory against purified virus. Virus in crude sap extracted from symptomatic tissue was mechanically transmitted to Chenopodium quinoa, C. amaranticolor, Nicotiana tabacum Xanthi nc and White Burley, N. clevelandii, N. benthamiana, N. sylvestris, and N. rustica, all of which developed symptoms characteristic of TuMV infection (1). ELISA testing of leaf sap extracted from mechanically inoculated indicator plants gave a strong positive reaction to TuMV. Leaf dip preparations of H. esculentus were analyzed by transmission electron microscopy. Filamentous virus particles typical of a potyvirus were observed in samples from symptomatic leaves. General primer pairs, which cover the complete 3′-end of the potyvirus genome were used in a reverse transcription-polymerase chain reaction assay (RT-PCR), gave an expected amplification product of approximately 300 bp. The nucleotide sequence of the PCR product was 97% identical to the CP sequence of other TuMV, thus verifying TuMV infection of H. esculentus. This is the first report of H. esculentus infection by TuMV. Reference: (1) A. Gera et al. J. Phytopathol. 145:289-293, 1997.
New Hosts of the Parasitic Flowering Plant, Alectra vogelii, in Malawi
Authors: Subrahmanyam P. 
Published: May 2007

Alectra vogelii Benth. (Family: Scrophulariaceae) is a vascular hemiparasite of various leguminous crops in Africa, including peanut (Arachis hypogaea), bambara groundnut (Vigna subterranea), cowpea (Vigna unguiculata), common bean (Phaseolus vulgaris), soybean (Glycine max), and mung bean (Vigna radiata) (1). It is a common parasite of peanut in Angola, Burkina Faso, Malawi, Mozambique, Nigeria, Swaziland, Zambia, and Zimbabwe (2). During April and May 2000, A. vogelii was observed parasitizing several wild Arachis species in a field at the Chitedze Agricultural Research Station near Lilongwe, Malawi. These species were part of a germ plasm enhancement program that included A. appressipila (ICRISAT Groundnut Accession number [ICG] 8127), A. batizocoi (ICG 8124), A. benensis (ICG 13215), A. cardenasii (ICG 13164 and 13166), A. correntina (ICG 8918), A. duranensis (ICG 13200), A. helodes (ICG 8955 and 14917), A. hoehnei (ICG 13228), A. magna (ICG 8960), A. pintoi (ICG 13222 and 14914), A. stenosperma (ICG 13172 and 13223), and A. valida (ICG 13230). In addition, A. vogelii was observed on four unidentified Arachis species (ICG 13231, 14875, 14888, and 14907). Parasitized plants were less vigorous and connections between A. vogelii and host plants could be observed by carefully removing the soil in the root zone. Mature A. vogelii plants were 0.3 to 0.5 m and had multiple stems branching at the base. Subsoil plant parts were a deep orange color. Flowers were prominent lemon yellow with horseshoe-shaped stigmata and leaves were light green. This is the first report of A. vogelii parasitizing wild Arachis species. References: (1) C. Parker. Crop Prot. 10:6–22, 1991. (2) P. Subrahmanyam. 1997. Parasitic flowering plants. Pages 70–71 in: Compendium of Peanut Diseases, 2nd Ed. N. Kokalis-Burelle, D. M. Porter, R. Rodriguez-Kabana, D. H. Smith, and P. Subrahmanyam, eds. American Phytopathological Society, St. Paul, MN.
First Occurrence of a Rust Fungus on English Daisy (Bellis perennis) in North America
Authors: Koike S. T. , Scholler M. , Herbaria Arthur , Herbaria Kriebel 
Published: May 2007

English daisy (Bellis perennis, family Asteraceae) is a flowering plant native to Europe. It is widely used as an ornamental in North America but is also a weed in lawns in the western and eastern United States. In December 2000, plants growing in urban landscapes in Monterey County, CA, were infected with rust. Orange aecia containing aeciospores that measured 14 to 18 × 12.5 to 15 μm developed profusely on leaves. Severely diseased leaves wilted and collapsed. Other spore states (pycnia, uredosori, and telia) were not observed. Based on the size and ornamentation of the aeciospores, reduced white peridium, apperance of the peridial cells, and arrangement of sori, we identified the pathogen as Puccinia lagenophorae Cooke (1,3), a rust fungus native to Australia and New Zealand that since 1960 has been introduced to other continents (2). On English daisy, the disease has been reported only in Australia and Europe (1). The pathogen also occurs on numerous other plants of the subfamily Asteroideae (family Asteraceae) (2). The occurrence of P. lagenophorae on English daisy follows the recent, first-time detection of the same pathogen on common groundsel (Senecio vulgaris) in California (3). To test cross infectivity, a spore suspension of a rust isolate from common groundsel was prepared and applied to various ornamental plants known to be hosts of P. lagenophorae. Inoculated plants were kept in a humidity chamber for 48 h, then maintained in a greenhouse. After 9 to 14 days, aecia developed on English daisy, cineraria (S. cruentus), and common groundsel but did not develop on dusty miller (S. cineraria) or pot marigold (Calendula officinalis). In addition, a single telium, surrounded by aecia, was observed on one of the infected English daisy plants. The telium contained two-celled teliospores that measured 31 to 36.5 × 16 to 19 (-22) μm and one-celled mesospores that measured 22 to 34 × 13.5 to 16 μm. At point of attachment, the widths of the stalks measured 7 to 8.5 (-9.5) μm. Some of the spores had surface ridges. The morphological features of the telio- and mesospores agree with those described for P. lagenophorae. To the authors' knowledge, this is the first record of a rust fungus on English daisy in North America. The inoculation experiments indicated that the rusts on English daisy and common groundsel are not biologically separated, casting doubt on the taxonomic concept of Weber et al. (4) that considered the rust on English daisy to be a distinct species, P. distincta McAlpine (although they did not examine type material of either P. lagenophorae or P. distincta). References: (1) M. Scholler. Sydowia 49:174, 1997. (2) M. Scholler. J. Plant Dis. Prot. 105:239, 1998. (3) M. Scholler and S. T. Koike. Plant Dis. 85:335, 2001. (4) R. W. S. Weber et al. Mycol. Res. 102:1227, 1998.
Yellow Nutsedge (Cyperus esculentus L.) as a Host of Sclerotinia minor
Authors: Hollowell J. E. , Shew B. B. 
Published: May 2007

Sclerotinia minor Jagger is a major pathogen of peanut (Arachis hypogaea L.) in North Carolina, Virginia, Oklahoma, and Texas. Economic crops that are hosts to S. minor are seldom grown in rotation with peanut, and the pathogenicity of S. minor to most weed species commonly found in peanut fields is unknown. In September 2000, signs and symptoms of Sclerotinia infection were observed on plants of yellow nutsedge growing in peanut fields in Bertie County, NC. Fluffy white mycelium, water soaked and bleached areas of the leaves were observed on basal portions of plants. Isolations were made from a symptomatic plant growing in a peanut field at the Peanut Belt Research Station at Lewiston-Woodville, NC. Small portions (1 to 2 cm) of symptomatic leaves were placed on potato dextrose agar (PDA) and pure cultures typical of S. minor were obtained. Small black irregular-shaped sclerotia (<2 mm) were produced abundantly and scattered over the culture surface (1). Pathogenicity was tested by placing agar plugs of mycelium of the fungus between the leaf blades of potted mature yellow nutsedge plants. Plants were misted with water, enclosed in plastic bags, and incubated on a lab counter top at ambient temperature (˜24°C). Mycelia developed after 3 to 4 days and chlorotic leaves appeared by day 7. Sclerotia were observed in 11 days on seedheads, which were distal from the site of inoculation. Uninoculated plants did not develop symptoms. The fungus was reisolated on PDA, and typical cultures of S. minor with small sclerotia were obtained. The nutgrass isolate was inoculated onto detached peanut leaves and typical symptoms developed. This is the first report of yellow nutsedge as a host of S. minor. Reference: (1) L. M. Kohn. Mycotaxon 9:365–444, 1979.
First Report of Tomato yellow leaf curl virus on Tomato Crops in Greece
Authors: Avgelis A. D. , Roditakis N. , Dovas C. I. , Katis N. I. , Varveri C. , Vassilakos N. , Bem F. 
Published: May 2007

In late summer 2000, tomato (Lycopersicon esculentum Mill.) grown in greenhouses in Ierapetra, Tympaki, and Chania (Crete) showed leaf curling, reduced leaf size, yellowing, shortened internodes, and a bushy appearance. More than 30 ha of tomato greenhouses were affected and the disease incidence ranged from 15 to 60% with estimated crop losses of over $500,000. Similar symptoms were observed in tomato samples from Marathon (Attiki) and Southern Peloponnese. All greenhouses with infected plants were infested with high populations of Bemisia tabaci (Gennadius), which were also observed outside the greenhouses on several weeds. Tomato symptoms were similar to those caused by Tomato yellow leaf curl virus (TYLCV). The assumed virus could not be transmitted mechanically but successful transmission was obtained by grafting onto healthy tomato plants. Over 100 samples of symptomatic tomato plants collected from Crete and southern Peloponnese gave positive reactions when tested by ELISA using monoclonal antibodies to TYLCV-European (Adgen Ltd). The serological results were confirmed by PCR using two pairs of primers, universal degenerate (1) and MA 13 and MA 17 (2), amplifying different parts of the virus genome. The restriction fragment length polymorphism (RFLP) analysis (AluI, HaeIII, and TaqI) of the 541 bp amplicon obtained with the degenerate primers showed patterns similar to TYLCV-Is (Israeli species). The second pair of primers gave the expected 348 bp product, which was sequenced. Sequence comparisons revealed 99% identity with TYLCV-Is (EMBL no. X15656, X76319). The resulting sequence was at least 97.7% identical to sequences of TYLCV isolates from the Dominician Republic (EMBL no. AF024715), Cuba (EMBL no. AJ223505), Portugal (EMBL no. AF105975), Iran (EMBL no. AJ13271), and Spain (EMBL no. AF071228). The disease appeared for the first time in 1992 in Tymbaki, but was limited to very few plants in one glasshouse. However, the cause was not determined. To our knowledge, this is the first report of TYLCV of the Begomovirus genus in Greece. References: (1) D. Deng et al. Ann. Appl. Biol. 125:327, 1994. (2) J. Navas-Castillo et al. J. Virol. Methods 75:195, 1998.
First Report of a Cucumber mosaic virus-Associated Satellite RNA in Lobelia erinus
Authors: Nameth S. G. P. , Fisher J. R. 
Published: May 2007

Lobelia (Lobelia erinus L.) is a common herbaceous annual used in flower beds and hanging baskets. The plant blooms from early to late summer. In the summer of 2000, Lobelia plants expressing virus-like symptoms were collected from a greenhouse-based production site in Ohio. Affected plants expressed a mild leaf mosaic and stunting. Viral-associated dsRNA was isolated from 7 g of symptomatic leaf tissue (1). Four dsRNAs were observed at 3.9, 3.0, 2.25, and 1.05 kb indicating the presence of a Cucumovirus. A fifth dsRNA at 0.75 kb also was observed, consistent with the presence of a satellite RNA. Enzyme-linked immunosorbent assay (ELISA) analysis (Agdia, Inc., Elkhart, IN) of symptomatic Lobelia tissue confirmed the presence of Cucumber mosaic virus (CMV). A (S)CARNA-5 (-) cDNA clone (American Type Culture Collection #45124) was labeled with digoxygenin (DIG) as per the manufacturer's instructions (Genius II DIG-DNA Labeling Kit, Boehringer Mannheim) and used as a diagnostic probe to detect this satellite RNA. Northern hybridization confirmed the identity of the satellite RNA (2). This is the first report of any satellite RNA associated with a virus infection in Lobelia and the first report of CMV in this host in Ohio. References: (1) J. R. Fisher and S. G. P. Nameth. HortScience 35:230–234, 2000. (2) R. A. Valverde et.al. Plant Dis. 74:255–258, 1990.
First Report of Aster Yellows-Related Subgroup I-A Phytoplasma Strains in Carrot, Phlox, Sea-Lavender, Aconitum, and Hyacinth in Lithuania
Authors: Valiunas D. , Alminaite A. , Staniulis J. , Jomantiene R. , Davis R. E. 
Published: May 2007

Phytoplasma strains that belong to group 16SrI (aster yellows phytoplasma group), subgroup A (I-A, North American tomato big bud phytoplasma subgroup) were discovered in diverse plant species in Lithuania. Plants in which the strains were found exhibited symptoms characteristic of infections by phytoplasma. Carrot (Daucus sativus) with carrot proliferation disease exhibited symptoms of proliferation of the crown, chlorosis of young leaves, and reddening of mature leaves. Diseased phlox (Phlox paniculata) exhibited symptoms of virescence and leaf chlorosis. Diseased sea-lavender (Limonium sinuatum) exhibited abnormal proliferation of shoots, chlorosis of young leaves, reddening of mature leaves, and degeneration of flowers. Diseased hyacinth (Hyacinthus orientalis) exhibited chlorosis of leaves and undeveloped flowers. Diseased Aconitum sp. exhibited proliferation of shoots. Phytoplasma-characteristic ribosomal (r) DNA was detected in the plants by use of the polymerase chain reaction (PCR). The rDNA was amplified in PCR primed by primer pair P1/P7 and reamplified in nested PCR primed by primer pair R16F2n/R16R2 (F2n/R2), as previously described (1). The phytoplasmas were classified through restriction fragment length polymorphism (RFLP) analysis of 16S rDNA, amplified in the nested PCR primed by F2n/R2, using single endonuclease enzyme digestion with AluI, MseI, KpnI, HhaI, HaeIII, HpaI, HpaII, RsaI, HinfI, TaqI, and Sau3AI. Collective RFLP patterns indicated that all detected phytoplasma strains were affiliated with subgroup I-A. The 16S rDNA amplified from the phytoplasma (CarrP phytoplasma) in diseased carrot was cloned in Escherichia coli, sequenced, and the sequence deposited in the GenBank data library (GenBank accession no. AF291682). The 16S rDNAs of CarrP and tomato big bud (GenBank acc. no. AF222064) phytoplasmas shared 99.8% nucleotide sequence similarity. Phytoplasmas belonging to group 16SrIII (3), group 16SrV (D. Valiunas, unpublished data), and subgroup I-C in group 16SrI (2,3) occur in Lithuania. This report records the first finding of a subgroup I-A phytoplasma in the Baltic region and expands the known plant host range of this phytoplasma subgroup. References: (1) R. Jomantiene et al. Int. J. Syst. Bacteriol. 48:269, 1998. (2) Jomantiene et al. Phytopathology 90:S39, 2000. (3) Staniulis et al. Plant Dis. 84:1061, 2000.