bluuebunny/crossref_metadata_2025_split huggingface dataset:
Bake off redux: a review and experimental evaluation of recent time series classification algorithms
Authors: Middlehurst Matthew , Schäfer Patrick , Bagnall Anthony 
Published: April 2024

AbstractIn 2017, a research paper (Bagnall et al. Data Mining and Knowledge Discovery 31(3):606-660. 2017) compared 18 Time Series Classification (TSC) algorithms on 85 datasets from the University of California, Riverside (UCR) archive. This study, commonly referred to as a ‘bake off’, identified that only nine algorithms performed significantly better than the Dynamic Time Warping (DTW) and Rotation Forest benchmarks that were used. The study categorised each algorithm by the type of feature they extract from time series data, forming a taxonomy of five main algorithm types. This categorisation of algorithms alongside the provision of code and accessible results for reproducibility has helped fuel an increase in popularity of the TSC field. Over six years have passed since this bake off, the UCR archive has expanded to 112 datasets and there have been a large number of new algorithms proposed. We revisit the bake off, seeing how each of the proposed categories have advanced since the original publication, and evaluate the performance of newer algorithms against the previous best-of-category using an expanded UCR archive. We extend the taxonomy to include three new categories to reflect recent developments. Alongside the originally proposed distance, interval, shapelet, dictionary and hybrid based algorithms, we compare newer convolution and feature based algorithms as well as deep learning approaches. We introduce 30 classification datasets either recently donated to the archive or reformatted to the TSC format, and use these to further evaluate the best performing algorithm from each category. Overall, we find that two recently proposed algorithms, MultiROCKET+Hydra (Dempster et al. 2022) and HIVE-COTEv2 (Middlehurst et al. Mach Learn 110:3211-3243. 2021), perform significantly better than other approaches on both the current and new TSC problems.
Reality-Based Tasks with Complex-Situations: Identifying Sociodemographic and Cognitive Factors for Solution
Authors: Knabbe Alina , Leiss Dominik , Ehmke Timo 
Published: April 2024

AbstractAcquiring mathematical literacy requires students to apply mathematics in various real-world contexts. However, mathematics classes often provide brief, content-focused descriptions of reality-based tasks and tasks that describe the situation as more complex, closer to reality, are still lacking. Students with different sociodemographic characteristics and cognitive factors have difficulties in solving reality-based tasks in mathematics lessons. The relationship between sociodemographic characteristics and cognitive factors (language and mathematical competence) concerning complex situation descriptions has not yet been investigated. To identify disadvantaged students in integrating such complex-situation tasks in mathematics lessons, this study aims to investigate which sociodemographic characteristics predict the solving of complex-situation tasks and whether cognitive factors mediate the relationship. Experts created 30 complex situations with different mathematical questions. A total of 519 9th- and 10th-grade students participated in a paper–pencil test. Path analysis revealed that the competence to solve complex-situation tasks is directly linked to gender and social background, with mathematical content-related skills and language competence mediating this relationship.
Personalized prognosis stratification of newly diagnosed glioblastoma applying a statistical decision tree model
Authors: Conrad Katharina , Löber-Handwerker Ronja , Hazaymeh Mohammad , Rohde Veit , Malinova Vesna 
Published: April 2024

Abstract
Purpose
Glioblastoma (GBM) is the most frequent glioma in adults with a high treatment resistance resulting into limited survival. The individual prognosis varies depending on individual prognostic factors, that must be considered while counseling patients with newly diagnosed GBM. The aim of this study was to elaborate a risk stratification algorithm based on reliable prognostic factors to facilitate a personalized prognosis estimation early on after diagnosis.

Methods
A consecutive patient cohort with confirmed GBM treated between 2010 and 2021 was retrospectively analyzed. Clinical, radiological, and molecular parameters were assessed and included in the analysis. Overall survival (OS) was the primary outcome parameter. After identifying the strongest prognostic factors, a risk stratification algorithm was elaborated with estimated odds of survival.

Results
A total of 462 GBM patients were analyzed. The strongest prognostic factors were Charlson Comorbidity Index (CCI), extent of tumor resection, and adjuvant treatment. Patients with CCI ≤ 1 receiving tumor resection had the highest survival odds (88% for 10 months). On the contrary, patients with CCI > 3 receiving no adjuvant treatment had the lowest survival odds (0% for 10 months). The 10-months survival rate in patients with CCI > 3 receiving adjuvant treatment was 56% for patients younger than 70 years and 22% for patients older than 70 years.

Conclusion
A risk stratification algorithm based on significant prognostic factors allowed a personalized early prognosis estimation at the time of GBM diagnosis, that can contribute to a more personalized patient counseling.
4-phenylbutyric acid improves sepsis-induced cardiac dysfunction by modulating amino acid metabolism and lipid metabolism via Comt/Ptgs2/Ppara
Authors: Zhou Yuanqun , Zhu Yu , Wu Yue , Xiang Xinming , Ouyang Xingnan , Liu Liangming , Li Tao 
Published: April 2024

Abstract
Introduction
Cardiac dysfunction after sepsis the most common and severe sepsis-related organ failure. The severity of cardiac damage in sepsis patients was positively associated to mortality. It is important to look for drugs targeting sepsis-induced cardiac damage. Our previous studies found that 4-phenylbutyric acid (PBA) was beneficial to septic shock by improving cardiovascular function and survival, while the specific mechanism is unclear.

Objectives
We aimed to explore the specific mechanism and PBA for protecting cardiac function in sepsis.

Methods
The cecal ligation and puncture-induced septic shock models were used to observe the therapeutic effects of PBA on myocardial contractility and the serum levels of cardiac troponin-T. The mechanisms of PBA against sepsis were explored by metabolomics and network pharmacology.

Results
The results showed that PBA alleviated the sepsis-induced cardiac damage. The metabolomics results showed that there were 28 metabolites involving in the therapeutic effects of PBA against sepsis. According to network pharmacology, 11 hub genes were found that were involved in lipid metabolism and amino acid transport following PBA treatment. The further integrated analysis focused on 7 key targets, including Comt, Slc6a4, Maoa, Ppara, Pparg, Ptgs2 and Trpv1, as well as their core metabolites and pathways. In an in vitro assay, PBA effectively inhibited sepsis-induced reductions in Comt, Ptgs2 and Ppara after sepsis.

Conclusions
PBA protects sepsis-induced cardiac injury by targeting Comt/Ptgs2/Ppara, which regulates amino acid metabolism and lipid metabolism. The study reveals the complicated mechanisms of PBA against sepsis.
Maximization of brackish water productivity for the sustainable production of striped catfish (Pangasianodon hypophthalmus) and grain sorghum (Sorghum bicolor (L.) Moench) cultivated under an integrated aquaculture–agriculture system
Authors: Kimera Fahad , Mugwanya Muziri , Madkour Khaled , Dawood Mahmoud A. O. , Sewilam Hani 
Published: April 2024

AbstractFreshwater scarcity, salinity, and poor soil fertility are the major challenges affecting both food and feed productions in arid and semi-arid regions of the world. Utilization of brackish water in the production of saline-tolerant fish and valuable field crops under an integrated system is promising in the maximization of yield per crop. The aim of this study, therefore, was to (1) assess the effect of saline aquaculture wastewater on the growth, yield, forage quality, and nutritive composition of sorghum seeds and (2) assess the effect of different water qualities on the survival, growth performance, and health status of Pangasianodon hypophthalmus. The experiment was conducted in a randomized completely block design of four salinity treatments with three replicates, i.e., control (freshwater mixed with inorganic fertilizers), 5000 ppm, 10,000 ppm, and 15,000 ppm. Our results indicated that although the control exhibited the highest growth (plant height, leaf number, internode number, leaf area, and soil–plant analysis development), grain, and forage yield, no significant differences were noted among the treatments. Likewise, no significant difference in the grain nutrient composition was noted among all the treatments. Assessment of the forage quality revealed improved crude protein content in the control compared to the saline treatments. However, no significant differences in the leaves and stalks fiber fractions were noted among all the treatments. Furthermore, rumen fermentation in terms of in vitro digestibility indicated no significant differences in the in vitro digestible dry matter, digestible organic matter, metabolic energy, net energy, microbial protein, short-chain fatty acids, and total dissolved nutrients among the treatments. However, rearing P. hypophthalmus in water salinities exceeding 10,000 ppm reduced the growth performance and health status of fish. Therefore, the integration of sorghum and P. hypophthalmus production in water salinities not exceeding 5000 ppm is a viable alternative to maximize brackish water productivity in freshwater-scarce regions.
An investigation of internal scatter during computed tomography using an anthropomorphic phantom
Authors: Van Wyk Bronwin , Ngobese Zanele Eunice , Lewis Shantel 
Published: April 2024

Abstract
Background
The general practice for all radiographic procedures is to use Lead Shielding to optimise radiation dose to the patient. The American Association of Physicists (AAPM) in Medicine in 2019 however, made a recommendation on the use of gonad and foetal shielding. The authors have noticed that very few papers on this topic come from developing countries, hence this study embarked on. The aim of our study was to evaluate internal scatter with Lead and without Lead Shielding in an anthropomorphic phantom during Computed Tomography of the brain, chest, abdomen, and pelvis.

Methods
The methodology was based on examinations of a RANDO phantom brain, chest, abdomen and pelvis on a General Electric Optima 660 scanner; which had a 128-channel multidetector row. Examinations were performed with Lead and without Lead Shielding equivalence of 0.35 mm, and the internal scatter measured using Thermoluminescent Dosimeters. The collected data was analysed descriptively to determine the mean and standard deviation. The T-tests and two-way analysis of variance (ANOVA) were used to compare the means.

Results
The findings of this study revealed that internal scatter was highest closest to the exposed area with higher internal scatter observed for thicker areas of the phantom. Although slightly higher readings were recorded without Pb shielding, a non-statistical significance was observed for all internal scatter measurements regardless of whether Lead Shielding was used or not.

Conclusions
A non-statistical significance for Computed Tomography examinations with and without Lead Shielding in confirmation with the AAPM positional statement.
Who ought to look towards the horizon? A qualitative study on the collective social responsibility of scientific research
Authors: Politi Vincenzo 
Published: April 2024

AbstractThere is a growing concern for the proper role of science within democratic societies, which has led to the development of new science policies for the implementation of social responsibility in research. Although the very expression ‘social responsibility of science’ may be interpreted in different ways, many of these emerging policy frameworks define it, at least in part, as a form of anticipative reflection about the potential impacts of research in society. What remains a rather under-discussed issue is the definition of the bearer of the social responsibility of science. In other words, it is not clear who is supposed to engage in such an anticipative reflection, whether individual researchers or research groups. In the past few years, philosophers of science have begun to use qualitative research methods to fill the gaps between normative models of the organisation of ideal scientific communities and the reality of actual scientific practices. In this article, I follow this approach to discuss the issue of the collective dimension of the social responsibility of science. I rely on a qualitative study conducted on an interdisciplinary research group and I describe how group dynamics position individuals and distribute duties and roles, including social responsibility. Qualitative descriptions of the distribution of duties within actual research groups should inform the formulation of general prescriptive theories on the collective responsibility of science.
Mathematics education researchers’ practices in interdisciplinary collaborations: Embracing different ways of knowing
Authors: Suazo-Flores Elizabeth , Walker William S. , Kastberg Signe E. , Aqazade Mahtob , Alyami Hanan 
Published: April 2024

AbstractMathematics education researchers (MERs) use practices unique to the mathematics education discipline to conduct their work. MERs’ practices, i.e., ways of being, interacting, and operating, define the field of mathematics education, are initially learned in doctoral preparation programs, and are encouraged and sanctioned by conferences and publications. Disciplinary practices facilitate MERs’ interactions within mathematics education. When working in interdisciplinary groups, differences in disciplinary ways of being, interacting, and operating can create challenges with completing research and other work. Since MERs’ engagement in interdisciplinary collaborations is encouraged and can result in products contributing to the evolution of the mathematics education discipline, it is important to explore what practices MERs use in interdisciplinary collaborations. We interviewed four MERs who led international interdisciplinary collaborations and used qualitative content analysis to create descriptions of practices described by MERs in their collaborations. Five practices were common between the MERs in interdisciplinary collaborations. MERs conducted interdisciplinary work by using practices that allowed them to situate themselves and others in the group (i.e., being practices), develop ideas (i.e., interacting practices), work towards common goals, and use structures to get the work done (i.e., operating practices). We argue that MERs developed new practices to position themselves and others, interact with practitioners from other disciplines, and get interdisciplinary work done. This study contributes to the evolution of the mathematics education discipline by offering five practices that can orient MERs to conducting interdisciplinary work and discussing how MERs experience interdisciplinary collaborations beyond providing mathematics education expertise.
Accelerating Oxygen Electrocatalysis Kinetics on Metal–Organic Frameworks via Bond Length Optimization
Authors: He Fan , Liu Yingnan , Yang Xiaoxuan , Chen Yaqi , Yang Cheng-Chieh , Dong Chung-Li , He Qinggang , Yang Bin , Li Zhongjian , Kuang Yongbo , Lei Lecheng , Dai Liming , Hou Yang 
Published: April 2024

AbstractMetal–organic frameworks (MOFs) have been developed as an ideal platform for exploration of the relationship between intrinsic structure and catalytic activity, but the limited catalytic activity and stability has hampered their practical use in water splitting. Herein, we develop a bond length adjustment strategy for optimizing naphthalene-based MOFs that synthesized by acid etching Co-naphthalenedicarboxylic acid-based MOFs (donated as AE-CoNDA) to serve as efficient catalyst for water splitting. AE-CoNDA exhibits a low overpotential of 260 mV to reach 10 mA cm−2 and a small Tafel slope of 62 mV dec−1 with excellent stability over 100 h. After integrated AE-CoNDA onto BiVO4, photocurrent density of 4.3 mA cm−2 is achieved at 1.23 V. Experimental investigations demonstrate that the stretched Co–O bond length was found to optimize the orbitals hybridization of Co 3d and O 2p, which accounts for the fast kinetics and high activity. Theoretical calculations reveal that the stretched Co–O bond length strengthens the adsorption of oxygen-contained intermediates at the Co active sites for highly efficient water splitting.
Alone or Combined Effect of Seaweed and Humic Acid Applications on Rapeseed (Brassica napus L.) under Salinity Stress
Authors: Gürsoy Mehtap 
Published: April 2024

AbstractOrganic fertilisers and biostimulants play a very important role in the germination, seedling stage, yield and quality of plants. Seaweed and humic acid are organic substances known for their positive effects. Therefore, the aim of this study was to investigate the effects of humic acid, seaweed extract and their combined applications against salt stress in oilseed rape at the seedling development stage. The effects of foliar application of seaweed extract (SW1, SW2, SW3) (0, 10, 20 mL), humic acid (HA1, HA2, HA3) (0, 10, 20 mL) and SW + HA (SW1 + HA1, SW2 + HA2, SW3 + HA3) (0, 10(5 + 5 mL L− 1 SW + HA), 20 mL L− 1 (10 + 10 mL L− 1 SW + HA)) on resistance to salt concentrations (S1, S2, S3) (0, 50, 100 mM) in oilseed rape cultivar (Elvis) under greenhouse conditions. In this study, seedling length (SL), root length (RL), total chlorophyll (Total Chl), carotenoids (Crt), electrolyte leakage (EL), malondialdehyde (MDA), superoxide dismutase (SOD), total phenolic compounds (TPC), relative water content (RWC) and proline (Pro) parameters were examined. Both applications played a significant role in reducing the negative effects of salt stress on all parameters studied. The combined application of SW + HA resulted in a remarkable increase in SL, RL TPC, SOD and RWC. In particular, the SW3 + HA3 dose played a more effective role in the antioxidant protective mechanism against stress. According to the PCA analysis, the studied parameters could be divided into 3 different groups. It was concluded that SW and HA can be evaluated as an effective natural, eco-friendly material that can be used to increase the resistance of plants to salt stress. In conclusion, in this study all applications are compared with each other, it has been determined that SW + HA is more effective application in reducing the effects of salt stress than others.
Energy Transitions in Central and Eastern Europe
Authors: Maltby Tomas , Mišík Matúš 
Published: April 2024

This book examines the mutual interplay of climate and energy policies in eleven Central and Eastern European countries in the context of the EU's energy transition. Energy security has long been prioritised in the region and has shaped not only national climate and energy policy, but also EU-level policy-making and implementation. Whilst the region shares economic, institutional and historical energy supplier commonalities it is not homogenous, and the book considers the significant differences between the preferences and policies of these member states. Chapters also explore the effect of the EU on member states that have joined since 2004 and their influence on the EU's energy and climate policies and their role in highlighting the importance of the concepts of security and solidarity. The book highlights the challenges to, and drivers of, energy transitions in the region and compares these with those in global energy transitions.
The Legality and Ethics of Web Scraping in Archaeology
Authors: Paige Jonathan 
Published: April 2024

ABSTRACTWeb scraping, the practice of automating the collection of data from websites, is a key part of how the internet functions, and it is an increasingly important part of the research tool kit for scientists, cultural resources professionals, and journalists. There are few resources intended to train archaeologists in how to develop web scrapers. Perhaps more importantly, there are also few resources that outline the normative, ethical, and legal frameworks within which scraping of archaeological data is situated. This article is intended to introduce archaeologists to web scraping as a research method, as well as to outline the norms concerning scraping that have evolved since the 1990s, and the current state of US legal frameworks that touch on the practice. These norms and legal frameworks continue to evolve, representing an opportunity for archaeologists to become more involved in how scraping is practiced and how it should be regulated in the future.
Experimental Archaeogaming
Authors: Aycock John , Biittner Katie 
Published: April 2024

ABSTRACTArchaeogaming is an area of increasing interest within archaeology. As archaeogaming's theory and practice are being fleshed out, it is worth considering if there are parallels to traditional archaeological methods within the study of video games. Here, we examine one such possibility: is there an archaeogaming equivalent to experimental archaeology? As a case study, we explore the system used for the mid-1980s development of an unreleased video game prototype for the game company Activision. Through examining this development system, whose use would be otherwise invisible in the finished software artifact, we demonstrate how we have both reconstructed a seemingly lost piece of the system virtually and used this reconstruction for experiments. The methodology we describe can be applied to digital artifacts within contemporary archaeology beyond the scope of video games, and it illustrates some key differences between studying physical and digital artifacts.
Best Practices for Publishing pXRF Analyses
Authors: Johnson Kimberly , Quinn Colin P. , Goodale Nathan , Conrey Richard 
Published: April 2024

ABSTRACTWith its promise of nondestructive processing, rapid low-cost sampling, and portability to any field site or museum in the world, portable X-ray fluorescence (pXRF) spectrometry is rapidly becoming a standard piece of equipment for archaeologists. Even though the use of pXRF is becoming standard, the publication of pXRF analytical methods and the resulting data remains widely variable. Despite validation studies that demonstrate the importance of sample preparation, data collection settings, and data processing, there remains no standard for how to report pXRF results. In this article, we address the need for best practices in publishing pXRF analyses. We outline information that should be published alongside interpretive results in any archaeological application of pXRF. By publishing this basic information, archaeologists will increase the transparency and replicability of their analyses on an inter-analyst/inter-analyzer basis and provide clarity for journal editors and peer reviewers on publications and grant proposals for studies that use pXRF. The use of these best practices will result in better science in the burgeoning use of pXRF in archaeology.