bluuebunny/crossref_metadata_2025_split huggingface dataset:
Flight periodicity and the vertical distribution of high-altitude moth migration over southern Britain
Authors: Wood C.R. , Reynolds D.R. , Wells P.M. , Barlow J.F. , Woiwod I.P. , Chapman J.W. 
Published: February 2009

AbstractThe continuous operation of insect-monitoring radars in the UK has permitted, for the first time, the characterization of various phenomena associated with high-altitude migration of large insects over this part of northern Europe. Previous studies have taken a case-study approach, concentrating on a small number of nights of particular interest. Here, combining data from two radars, and from an extensive suction- and light-trapping network, we have undertaken a more systematic, longer-term study of diel flight periodicity and vertical distribution of macro-insects in the atmosphere. Firstly, we identify general features of insect abundance and stratification, occurring during the 24-hour cycle, which emerge from four years' aggregated radar data for the summer months in southern Britain. These features include mass emigrations at dusk and, to a lesser extent, at dawn and daytime concentrations associated with thermal convection. We then focus our attention on the well-defined layers of large nocturnal migrants that form in the early evening, usually at heights of 200–500 m above ground. We present evidence from both radar and trap data that these nocturnal layers are composed mainly of noctuid moths, with species such as Noctua pronuba, Autographa gamma, Agrotis exclamationis, A. segetum, Xestia c-nigrum and Phlogophora meticulosa predominating.
Widespread infestation of the exotic mealybug species,Phenacoccus solenopsis(Tinsley) (Hemiptera: Pseudococcidae), on cotton in India
Authors: Nagrare V.S. , Kranthi S. , Biradar V.K. , Zade N.N. , Sangode V. , Kakde G. , Shukla R.M. , Shivare D. , Khadi B.M. , Kranthi K.R. 
Published: February 2009

AbstractA survey was conducted in 47 locations in nine cotton-growing states of India to identify the composition of mealybug species occurring on cotton. Results of the taxonomic study showed that two mealybug species, the solenopsis mealybug,Phenacoccus solenopsis(Tinsley), and the pink hibiscus mealybug,Maconellicoccus hirsutus(Green), were found to infest cotton plants from all nine cotton growing states of the country. However,P. solenopsiswas found to be the predominant mealybug species, comprising 95% of the samples examined.P. solenopsis, which was hitherto not reported to occur in India, now appears to be widespread on cotton in almost all cotton-growing states of the country.P. solenopsisis an exotic species originated from the USA and was reported to damage cotton and crops of 14 families. This report discusses the implications of the introduction of this exotic polyphagous pest species and the necessary steps to mitigate its potential threat to agriculture in India.
The genetic consequences of different dispersal behaviours in Lycaenid butterfly species
Authors: Habel J.C. , Schmitt T. 
Published: February 2009

AbstractMany studies in population ecology have shown that related species have different dispersal behaviours. Species with sedentary and migratory behaviour exist in butterflies. While the genetic responses to population isolation are well studied, the effects of different dispersal behaviours of species are widely unknown. Therefore, we analysed 19 allozyme loci of two lycaenid butterflies,Cupido minimusas a sedentary butterfly andAricia agestisas a mobile and expansive species. We collected 594 individuals (280 ofC. minimusand 314 ofA. agestis) in a western German study region with adjacent areas in Luxembourg and northeastern France. The genetic differentiation among populations ofA. agestis(FST=3.9%) was lower than inC. minimus(FST=5.6%). Both species built up an isolation-by-distance system, which is more pronounced inA. agestisthan inC. minimus. The genetic diversity inC. minumuspopulations (e.g.Ptot=73.5%) is higher for all analysed parameters than inA. agestis(e.g.Ptot=52.1%). Both species show specific genetic characteristics fitting with their different dispersal behaviours and respective ecological strategies. In the light of conservation genetics, we deduce that highly fragmented populations do not necessarily have a high extinction probability, but this risk depending much more on specific population genetic structures. In the studied species,C. minimuspreserves a complex genetic constitution by high population densities. The patchily distributedA. agestisrepresents less rare alleles, present only in some populations, and holds up genetic diversity by high mobility.
Tissue-dwelling philometrid nematodes of the fish Arapaima gigas in Brazil
Authors: Santos C. Portes , Moravec F. 
Published: February 2009

AbstractThe nematode Rumai rumai Travassos, 1960 (Philometridae) is redescribed from the tissues of the mouth, tongue, operculum and head of the arapaima, Arapaima gigas (Schinz) (Osteichthyes), from Mexiana Island, Amazon River Delta, Brazil. Additional data on the related Nilonema senticosum (Baylis, 1922) from the same host and locality are also presented. Rumai rumai is characterized by the presence of a sclerotized formation on the female cephalic end, dorsal and ventral cephalic projections, the shape and structure of the oesophagus and a conical caudal extremity. Males of both R. rumai and N. senticosum, specific parasites of the ancient arapaima fish in the Neotropics, remain unknown. The relationship between these tissue-dwelling nematodes and the aquaculture system of Mexiana Island is commented upon.
A comparison of traditional elasticity and variance-standardized perturbation analyses: a case study with the tropical tree species Manilkara zapota (Sapotaceae)
Authors: Cruz-Rodríguez Juan Antonio , López-Mata Lauro , Valverde Teresa 
Published: February 2009

Abstract:Knowledge of the population dynamics of tropical trees has expanded considerably in the past 20 years. An important observation deriving from these investigations is the confirmation that population behaviour varies both in time and space. A tool recently developed to evaluate the potential for variation in vital rates, and therefore in population growth rate, is variance-standardized perturbation analysis (VSPA). In this paper we report the results of a 2-y demographic analysis of a population of the tropical tree Manilkara zapota in a subtropical rain forest in the Mexican state of Veracruz, in which variance-standardized perturbation analysis was applied and compared with the results of the traditional elasticity analyses. To build population projection matrices, we tagged and followed a sample of 91 juvenile and adult individuals, and 635 seedlings. We subdivided the sample in nine size classes (defined by tree height and dbh; as well as leaf size, in the case of seedlings) and estimated transition probabilities and fecundity for each class. The demography of M. zapota varied greatly from the first to the second year of study (in 1998–1999, λ = 0.987, while in 1999–2000, λ = 1.038) due to negligible seed production during the first year and a massive reproductive event during the second. The largest elasticity values for both years corresponded to persistence of large juveniles and adults. Although the fecundity entries showed very low elasticity values, the variance-standardized perturbation analysis revealed the importance of these matrix entries; transition to larger categories and retrogression to smaller ones of saplings and juveniles were also important demographic processes contributing to variation in λ according to the VSPA. Thus, although the results of elasticity analysis and VSPA were similar for the 1998–1999 matrix, they differed substantially for the 1999–2000 matrix. In the latter, the VSPA enhanced the importance of demographic processes that are intuitively relevant for the population studied. This points toward the necessity of further exploring the use of VSPA, since it offers several advantages over the traditional elasticity analysis: it concentrates on the impact on λ of vital rates that actually vary, and the interpretation of the results is more realistic and straightforward.
Spatial ecology of hatchling water pythons (Liasis fuscus) in tropical Australia
Authors: Pizzatto Lígia , Madsen Thomas , Brown Gregory P. , Shine Richard 
Published: February 2009

Abstract:Young snakes are rarely seen in the field and little is known about their habits, mostly because they are too small for radio-telemetry (the primary method for studying snake spatial ecology). However, the offspring of some larger species can be fitted with transmitters and we investigated the spatial ecology and habitat use of ten hatchling water pythons (Liasis fuscus: Pythonidae) in the floodplain of the Adelaide River, tropical Australia. Patterns of habitat use in the late wet season and during the dry season were similar to those of adults tracked in the same vicinity in an earlier study. Soon after release the young snakes moved to the floodplain, avoiding pasture areas. Diurnal refuge sites were typically in the base of grass clumps or below the soil surface, especially in sites with thick vegetation and deep, wide soil cracks. Adult snakes are more sedentary but move longer absolute distances (mean ± SE = 252 ± 50 m wk−1) than hatchlings (66.3 ± 41 m wk−1). However, hatchling snakes moved longer distances relative to body size (84.4 ± 1.1 body lengths wk−1) than did the previously studied adults (66.0 ± 1.1 body lengths wk−1). Mean and minimum body temperatures of the hatchlings were correlated with mean and minimum air temperatures, respectively.
A protocol for sampling vascular epiphyte richness and abundance
Authors: Wolf Jan H. D. , Gradstein S. Robbert , Nadkarni Nalini M. 
Published: February 2009

Abstract:The sampling of epiphytes is fraught with methodological difficulties. We present a protocol to sample and analyse vascular epiphyte richness and abundance in forests of different structure (SVERA). Epiphyte abundance is estimated as biomass by recording the number of plant components in a range of size cohorts. Epiphyte species biomass is estimated on 35 sample-trees, evenly distributed over six trunk diameter-size cohorts (10 trees with dbh > 30 cm). Tree height, dbh and number of forks (diameter > 5 cm) yield a dimensionless estimate of the size of the tree. Epiphyte dry weight and species richness between forests is compared with ANCOVA that controls for tree size. SChao1is used as an estimate of the total number of species at the sites. The relative dependence of the distribution of the epiphyte communities on environmental and spatial variables may be assessed using multivariate analysis and Mantel test. In a case study, we compared epiphyte vegetation of six Mexican oak forests and one Colombian oak forest at similar elevation. We found a strongly significant positive correlation between tree size and epiphyte richness or biomass at all sites. In forests with a higher diversity of host trees, more trees must be sampled. Epiphyte biomass at the Colombian site was lower than in any of the Mexican sites; without correction for tree size no significant differences in terms of epiphyte biomass could be detected. The occurrence of spatial dependence, at both the landscape level and at the tree level, shows that the inclusion of spatial descriptors in SVERA is justified.
Supplemental irrigation increases seedling performance and diversity in a tropical forest
Authors: Paine C. E. Timothy , Harms Kyle E. , Ramos Jesús 
Published: February 2009

Abstract:Diversity is positively correlated with water availability at global, continental and regional scales. With the objective of better understanding the mechanisms that drive these relationships, we investigated the degree to which variation in water availability affects the performance (recruitment, growth and survival) of juvenile trees. Precipitation was supplemented throughout two dry seasons in a seasonal moist forest in south-eastern Peru. Supplementing precipitation by 160 mm mo−1, we increased soil moisture by 17%. To generate seedling communities of known species composition, we sowed 3840 seeds of 12 species. We monitored the fates of the 554 seedlings recruited from the sown seeds, as well as 1856 older non-sown seedlings (10 cm ≤ height < 50 cm), and 2353 saplings (> 1 m tall). Watering significantly enhanced young seedling growth and survival, increasing stem density and diversity. Watering diminished the recruitment of species associated with upland forests, but increased the survival of both upland- and lowland-associated species. Though supplemental watering increased the growth of older seedlings, their density and diversity were unaffected. Sapling performance was insensitive to watering. We infer that variation in dry-season water availability may affect seedling community structure by differentially affecting recruitment and increasing overall survival. These results suggest that differential seedling recruitment and survival may contribute to the observed relationships between water availability, habitat associations and patterns of tree species richness.
Habitat and fig characteristics influence the bird assemblage and network properties of fig trees from Xishuangbanna, South-West China
Authors: Sanitjan Sawat , Chen Jin 
Published: February 2009

Abstract:To understand how fruit tree characteristics and microhabitats shape the assemblage of birds on fig trees and the pattern of fig–bird interactions, we observed and recorded, over 96 d and 816 h, the frugivorous birds visiting 32 individual trees belonging to 14 species ofFicusthat were distributed across four different sites. A total of 30 bird species were recorded as eating figs, comprising 66.7% of the total number of frugivorous bird species recorded at the four sites. Small passerine birds such as bulbuls were the dominant frugivores for fig species. The number of bird species visiting different fig trees was significantly influenced by the crop size and canopy volume. Fruit colour and fruit size did not significantly influence the number of bird species, whereas habitats appeared to influence the composition of visiting birds. The fig–frugivorous bird interaction was asymmetrically structured, and the degree of nestedness appeared to be influenced by the forest type and degree of disturbance: the degree of nestedness in non-limestone forest tended to be higher than limestone forest; forest with less disturbance tend to be more nested compared with the open forest with high disturbance.
Incidence of hepatitis C in drug injectors: the role of homelessness, opiate substitution treatment, equipment sharing, and community size
Authors: CRAINE N. , HICKMAN M. , PARRY J. V. , SMITH J. , WALKER A. M. , RUSSELL D. , NIX B. , MAY M. , McDONALD T. , LYONS M. 
Published: February 2009

SUMMARYA prospective cohort study estimated the incidence of hepatitis C virus (HCV) in drug injectors in South Wales (UK). In total, 286/481 eligible seronegative individuals were followed up after approximately 12 months. Dried blood spot samples were collected and tested for anti-HCV antibody and behavioural data were collected at baseline and follow-up. HCV incidence was 5·9/100 person-years [95% confidence interval (CI) 3·4–9·5]. HCV incidence was predicted by community size [incident rate ratio (IRR) 6·6, 95% CI 2·11–20·51,P=0·001], homelessness (IRR 2·9, 95% CI 1·02–8·28,P=0·047) and sharing injecting equipment (IRR 12·7, 95% CI 1·62–99·6,P=0·015). HCV incidence was reduced in individuals in opiate substitution treatment (IRR 0·34, 95% CI 0·12–0·99,P=0·047). In order to reduce follow-up bias we used multiple imputation of missing data using switching regression; after imputation estimated HCV incidence was 8·5/100 person-years (95% CI 5·4–12·7). HCV incidence varies with community size, equipment sharing and homelessness are associated with increased HCV incidence and opiate substitution treatment may be protective against HCV.
An assessment of census techniques, habitat use and threats to Swamp FrancolinFrancolinus gularisin Koshi Tappu Wildlife Reserve, Nepal
Authors: DAHAL BHAGAWAN RAJ , McGOWAN PHILIP J. K. , BROWNE STEPHEN J. 
Published: February 2009

SummarySwamp FrancolinFrancolinus gularisis endemic to the Indian sub-continent, being found in India, Nepal and Bangladesh. It is threatened with extinction and is listed as ‘Vulnerable’, mainly as a result of habitat degradation and loss. This study investigated the distribution, habitat use, threats and most appropriate method for surveying the species at Koshi Tappu Wildlife Reserve in southeastern Nepal from February to July 2004. The most appropriate method, which recorded the highest number of birds (without double-counting), was identified as point counts undertaken early in the morning during the breeding season. The abundance estimate for the species was 15.5 ± 2.50 birds km−2. Habitat use, as compared with availability, differed significantly between seasons, with Woodland-Grassland and Wet Grassland preferred in the breeding season and summer. Dry Grassland and Woodland were preferred during the monsoon months. On average, 40.4 (± 15.6) people were recorded in the study area each day and there was a general trend for the number of birds to decrease with increasing numbers of people. Each day an average of 31.6 (± 16.7) livestock was recorded in the study area and more than 120 were regularly present throughout the eastern section, although there was no significant relationship between number of cattle and Swamp Francolin. We conclude that as long as the degree and distribution of anthropogenic pressures does not increase, the Swamp Francolin should survive at Koshi Tappu Wildlife Reserve. However, as the species is reliant on different habitats in different seasons, deterioration in the quality or extent of either of these could have a serious impact on the species.
Clinical profiles and outcomes for Omani children with dilated cardiomyopathy seen in a regional referral hospital
Authors: Jaiyesimi Olufemi , Kasem Mohamed 
Published: February 2009

AbstractObjectiveTo provide an account of paediatric dilated cardiomyopathy as seen in a region of Oman, analysing the data from 32 consecutive children who received care in our unit between January, 1999, and August, 2007.ResultsThe patients, of whom 17 were male, were aged between 5 weeks and 8 years at presentation, with a median of 7 months. The disease was deemed to be myocarditis-induced in one-third, and idiopathic in half. Cardiac failure, seen in almost four-fifths, was the most frequent presenting feature. Correspondingly, the cardiothoracic ratios were increased, to a mean of 68% in 20 infants, and to 65% in 8 older children, and the left ventricular ejection fraction depressed, to a mean of 41%, in the 23 patients in whom it could be evaluated. Patients in cardiac failure received various combinations of diuretics, inotropes, and captopril. In addition, 6 received carvedilol, and 3 intravenous immunoglobulin. Death occurred in 2 patients shortly after admission, one left the hospital against medical advice, and the remaining 29 were followed-up for a mean of 37 months, with a range from 2 to 102 months. Recovery was noted in one-third of the patients, with one-quarter showing improvement but still requiring anti-failure medications. Slightly over two-fifths died. Of those with the idiopathic form, 40% died, with death occurring in 46% of those deemed to have myocarditis-induced disease, in half of those presenting in infancy, and in 57% of those who presented in cardiac failure.ConclusionDilated cardiomyopathy was often severe in our patients, albeit that the cause was frequently uncertain, and the response to standard anti-failure treatment unsatisfactory. Efforts should be intensified for unravelling its aetiology and improving medical treatment.
The Blalock-Taussig shunt: the social history of an eponym
Authors: Evans William N. 
Published: February 2009

AbstractCreating eponyms for surgical procedures or medical discoveries can be a simple objective process of attaching names of innovators. Some eponyms, however, have a controversial history. Undertaking the first systemic-to-pulmonary arterial shunt required the combined efforts of Helen Taussig, Vivien Thomas, and Alfred Blalock. In this review, I attempt to look beyond the mechanics of attributing the eponym to the larger social history surrounding the term.
Culture-independent identification of gut bacteria correlated with the onset of diabetes in a rat model
Authors: Roesch Luiz F W , Lorca Graciela L , Casella George , Giongo Adriana , Naranjo Andres , Pionzio Arianna M , Li Nan , Mai Volker , Wasserfall Clive H , Schatz Desmond , Atkinson Mark A , Neu Josef , Triplett Eric W 
Published: February 2009

Abstract
Bacteria associated with the onset of type 1 diabetes in a rat model system were identified. In two experiments, stool samples were collected at three time points after birth from bio-breeding diabetes-prone (BB-DP) and bio-breeding diabetes-resistant (BB-DR) rats. DNA was isolated from these samples and the 16S rRNA gene was amplified using universal primer sets. In the first experiment, bands specific to BB-DP and BB-DR genotypes were identified by automated ribosomal intergenic spacer analysis at the time of diabetes onset in BB-DP. Lactobacillus and Bacteroides strains were identified in the BB-DR- and BB-DP-specific bands, respectively. Sanger sequencing showed that the BB-DP and BB-DR bacterial communities differed significantly but too few reads were available to identify significant differences at the genus or species levels. A second experiment confirmed these results using higher throughput pyrosequencing and quantitative PCR of 16S rRNA with more rats per genotype. An average of 4541 and 3381 16S rRNA bacterial reads were obtained from each of the 10 BB-DR and 10 BB-DP samples collected at time of diabetes onset. Nine genera were more abundant in BB-DP whereas another nine genera were more abundant in BB-DR. Thirteen and eleven species were more abundant in BB-DP and BB-DR, respectively. An average of 23% and 10% of all reads could be classified at the genus and species levels, respectively. Quantitative PCR verified the higher abundance of Lactobacillus and Bifidobacterium in the BB-DR samples. Whether these changes are caused by diabetes or are involved in the development of the disease is unknown.