bluuebunny/crossref_metadata_2025_split huggingface dataset:
Transcriptional profiling of human monocytes reveals complex changes in the expression pattern of inflammation-related genes in response to the annexin A1-derived peptide Ac1-25
Authors: Lange Carsten , Starrett Diane J , Goetsch Julia , Gerke Volker , Rescher Ursula 
Published: September 2007

AbstractAnnexin A1 is a glucocorticoid-regulated, anti-inflammatory protein, which plays an important role as an endogenous regulator of the inflammatory response. Many of these anti-inflammatory properties are retained in the N-terminal annexin A1 peptide Ac1-25, which is released from the full-length protein by a neutrophil elastase. To elucidate whether the anti-inflammatory activity of the bioactive peptide is solely a result of immediate post-translational effects, which include the shedding of L-selectin or also involve transcriptional changes affecting leukocyte function, we recorded global gene expression changes in human monocytes stimulated with exogenously applied Ac1-25. Applying stringent selection criteria, we show that ∼100 genes are up-regulated, and ∼230 are down-regulated by a factor of at least two in the Ac1-25-treated monocytes. It is important that the profiling reveals that Ac1-25 induces an anti-inflammatory phenotype by down-regulating proinflammatory and up-regulating anti-inflammatory mediators. These effects, elicited by exogenously applied Ac1-25, depend, to different extents, on ERK1/2 and p38 signaling pathways. This identifies the annexin A1 N-terminal peptide as a stimulus, eliciting not only short-term, post-translational effects in human monocytes but also transcriptional changes, defining a more anti-inflammatory profile.
Disease-modifying capability of murine Flt3-ligand DCs in experimental autoimmune encephalomyelitis
Authors: Papenfuss Tracey L , Kithcart Aaron P , Powell Nicole D , McClain Melanie A , Gienapp Ingrid E , Shawler Todd M , Whitacre Caroline C 
Published: September 2007

AbstractDendritic cells (DCs) bridge the innate and adaptive immune response, are uniquely capable of priming naïve T cells, and play a critical role in the initiation and regulation of autoimmune and immune-mediated disease. At present, in vivo expansion of DC populations is accomplished primarily through the administration of the recombinant human growth factor fms-like tyrosine kinase 3 ligand (hFL), and in vitro DCs are generated using cytokine cocktails containing GM-CSF ± IL-4. Although hFL has traditionally been used in mice, differences in amino acid sequence and biological activity exist between murine FL (mFL) and hFL, and resultant DC populations differ in phenotype and immunoregulatory functional capabilities. This study developed and characterized mFL-generated DCs and determined the therapeutic capability of mFL DCs in the autoimmune disease experimental autoimmune encephalomyelitis (EAE). Our findings demonstrate that mFL and hFL expand splenic DCs equally in vivo but that mFL-expanded, splenic DCs more closely resemble normal, resting, splenic DCs. In addition, a novel method for generating mFL-derived bone marrow-derived DCs (BM-DCs) was developed, and comparison of mFL with hFL BM-DCs found mFL BM-DCs to be less mature (i.e., lower MHC Class II, CD80, and CD86) than hFL BM-DCs. These immature mFL DCs up-regulated costimulatory molecules in response to maturation stimuli LPS and TNF-α. Mature mFL BM-DCs were immunogenic and exacerbated the clinical disease course of EAE.
Contributions of Intracellular Loops 2 and 3 of the Lutropin Receptor in Gs Coupling
Authors: Angelova Krassimira , Fanelli Francesca , Puett David 
Published: September 2007

Abstract
A number of amino acids essential for Gs coupling, i.e. hot spots, were identified after in vitro Ala-scanning mutagenesis of the cytosolic extensions of helices 3, 5, and 6 and of intracellular loops 2 and 3 (IL2 and IL3) of the human LH receptor (LHR). Consistent with the results of in vitro experiments involving ligand binding and ligand-mediated signaling in transiently transfected human embryonic kidney 293 cells, computational modeling of the isolated receptor and of the receptor-G protein complexes suggests an important role of the cytosolic extension of helix 3 and the N-terminal portion of the IL2 in Gsα interaction, whereas the contribution of IL3 is marginal. Mapping the hot spots into the computational models of LHR and the LHR-Gs complexes allowed for a distinction between receptor sites required for intramolecular structural changes (i.e. I460, T461, H466, and I549) and receptor sites more likely involved in G protein recognition (i.e. R464, T467, I468, Y470, Y550, and D564). The latter sites include the highly conserved arginine of the (E/D)R(Y/W) motif, which is therefore likely to be a receptor recognition point for Gs rather than a switch of receptor activation. The results of in vitro and in silico experiments carried out in this study represent the first comprehensive delineation of functionality of the individual residues in the intracellular domains of LHR and establish potential switches of receptor activation as well as a map of the primary receptor recognition sites for Gs. A novel way to consider constitutively active mutants was inferred from this study, i.e. receptor states with improved complementarity for the G protein compared to the wild-type receptor.
Orientation towards prey in antlions: efficient use of wave propagation in sand
Authors: Fertin Arnold , Casas Jérôme 
Published: September 2007

SUMMARYSubstrate-borne vibration for locating mates, predators and prey is widespread in the animal kingdown. Antlion larvae dig funnel-shaped traps to catch ants and they are totally immersed in dry sand. We used a playback setup reproducing an ant walking on sand to clearly demonstrate that antlions use sand-borne vibrations to locate their prey. Half the tested animals moved towards the stimulus source. The shoot angle of sand tossing was very close to the target angle, indicating excellent ability to perceive stimulus direction. We also discuss orientation mechanisms in sand, a medium with highly unusual wave propagation properties.
Metabolic and digestive response to food ingestion in a binge-feeding lizard, the Gila monster (Heloderma suspectum)
Authors: Christel C. M. , DeNardo D. F. , Secor S. M. 
Published: September 2007

SUMMARY
The gastrointestinal tract possesses the capacity to change in form and function in response to fasting and feeding. Such plasticity can be dramatic for species that naturally experience long episodes of fasting between large meals (e.g. sit-and-wait foraging snakes, estivating anurans). By contrast,for active foraging species that feed more frequently on smaller meals,gastrointestinal responses are more modest in magnitude. The Gila monster Heloderma suspectum is an active foraging lizard that feeds infrequently on meals weighing up to one-third of its body mass. Additionally,Gila monsters possess a species-specific salivary peptide, exendin-4, which may be involved in the regulation of metabolic and digestive performance. To investigate the adaptive postprandial response of Gila monsters and the potential regulatory role of exendin-4, we measured metabolic and intestinal responses to feeding in the presence or absence of circulating exendin-4. Following the consumption of rodent or egg meals equivalent to 10% of lizard body mass, metabolic rates peaked at 4.0- to 4.9-fold of standard metabolic rates and remained elevated for 5–6 days. Specific dynamic action of these meals (43–60 kJ) was 13–18% of total meal energy. Feeding triggered significant increases in mucosal mass, enterocyte width and volume,and the upregulation of d-glucose uptake rates and aminopeptidase-N activity. Total intestinal uptake capacity for l-leucine, l-proline and d-glucose were significantly elevated within 1–3 days after feeding. Whereas the absence of circulating exendin-4 had no impact on postprandial metabolism or the postprandial response of intestinal structure and nutrient uptake, it significantly increased intestinal aminopeptidase-N activity. Within the continuum of physiological responses to feeding and fasting, Gila monsters occupy an intermediate position in experiencing moderate, though significant, regulation of intestinal performance with feeding.
Is basal metabolic rate influenced by age in a long-lived seabird, the snow petrel?
Authors: Moe Børge , Angelier Frédéric , Bech Claus , Chastel Olivier 
Published: September 2007

SUMMARYAgeing is associated with a decline in basal metabolic rate (BMR) in many species, including humans. The evolutionary and physiological causes underlying the relationship between age and BMR are poorly understood. Studies of procellariiform seabirds may provide valuable insight because they have a longer maximum lifespan than expected from their body size and rates of energy metabolism. Such studies are rare, however, because there are few populations with a high proportion of individuals of known age.We performed a cross-sectional study of energy metabolism in relation to age in a long-lived seabird, the snow petrel Pagodroma nivea. In an Antarctic population that has been subject to a long-term research program,including annual banding of chicks since 1963, we measured BMR of individuals aged between 8 and 39 years. We show that the BMR of the snow petrel does not decrease with increasing age. BMR seems to be sustained at a fixed level throughout the investigated age-span.We review this result in light of the disposable soma theory of ageing, and we discuss whether species-specific relationships between age and basal metabolic rate can be related to differences in maximum lifespan.
Rapid assimilation of yolk enhances growth and development of lizard embryos from a cold environment
Authors: Storm Melissa A. , Angilletta Michael J. 
Published: September 2007

SUMMARY
Selection for rapid growth and development in cold environments results in a geographic pattern known as countergradient variation. The eastern fence lizard, Sceloporus undulatus, exhibits countergradient variation in embryonic growth and development along latitudinal clines. To identify the proximate causes of countergradient variation, we compared the energy budgets of embryos from a cold environment (Virginia) and a warm environment (South Carolina) during development at a realistic thermal cycle. The difference in mean egg size between populations was controlled by removing yolk from large eggs and performing a sham manipulation on other eggs. Respiration was measured every 4 days throughout 48 days of incubation. After this period,eggs were dissected and the energy contents of embryos and yolk were determined by calorimetry. As expected from previous experiments, embryos from Virginia reached a more advanced stage of development and deposited more energy within tissues than embryos from South Carolina. The greater absorption of yolk by embryos from Virginia was associated with a higher rate of respiration. Assimilation of yolk by rapidly growing embryos could reduce growth or survival after hatching. Such costs might explain the maintenance of countergradient variation in S. undulatus.
Efficiency of labriform swimming in the bluegill sunfish (Lepomis macrochirus)
Authors: Jones Emily A. , Lucey Kaitlyn S. , Ellerby David J. 
Published: September 2007

SUMMARYBluegill sunfish (Lepomis macrochirus) swim in the labriform mode at low speeds, generating lift and thrust by beating their pectoral fins. The maximal power output available from the two largest pectoral fin adductor and abductor muscles, constituting half of the total pectoral girdle muscle mass,was measured in vitro and used to estimate the muscle mechanical power output during maximal labriform swimming (Pmech;0.15–0.21 W kg–1 body mass). Respirometry was used to estimate the total metabolic power input (Ptotal; 0.95 W kg–1 body mass) and the metabolic power available to the active muscle mass (Pmuscle; Ptotalminus standard metabolic rate, 0.57 W kg–1 body mass) at this swimming speed. Drag measurements made on towed, dead fish were used to estimate the mechanical power required to overcome body drag(Pdrag; 0.028 W kg–1 body mass). Efficiency estimates based on these data fell into the following ranges:overall swimming efficiency(ηgross=Pmech/Ptotal),0.16–0.22; muscle efficiency(ηmuscle=Pmech/Pmuscle),0.26–0.37; and propeller efficiency(ηprop=Pdrag/Pmech),0.15–0.20. Comparison with other studies suggests that labriform swimming may be more efficient than swimming powered by undulations of the body axis.
Chronic electrical stimulation drives mitochondrial biogenesis in skeletal muscle of a lizard,Varanus exanthematicus
Authors: Schaeffer Paul J. , Nichols Scott D. , Lindstedt Stan L. 
Published: September 2007

SUMMARYWe investigated the capacity for phenotypic plasticity of skeletal muscle from Varanus exanthematicus, the savannah monitor lizard. Iliofibularis muscle from one leg of each lizard was electrically stimulated for 8 weeks. Both stimulated and contralateral control muscles were collected and processed for electron microscopy. We used stereological analysis of muscle cross-sections to quantify the volume densities of contractile elements, sarcoplasmic reticulum, mitochondria and intracellular lipids. We found that mitochondrial volume density was approximately fourfold higher in the stimulated muscle compared to controls, which were similar to previously reported values. Sarcoplasmic reticulum volume density was reduced by an amount similar to the increase in mitochondrial volume density while the volume density of contractile elements remained unchanged. Intracellular lipid accumulation was visibly apparent in many stimulated muscle sections but the volume density of lipids did not reach a significant difference. Although monitor lizards lack the highly developed aerobic metabolism of mammals, they appear to possess the capacity for muscle plasticity.
Regulation of glycogen metabolism in gills and liver of the euryhaline tilapia (Oreochromis mossambicus) during acclimation to seawater
Authors: Chang Joshua Chia-Hsi , Wu Su-Mei , Tseng Yung-Che , Lee Yi-Chun , Baba Otto , Hwang Pung-Pung 
Published: September 2007

SUMMARYGlucose, which plays a central role in providing energy for metabolism, is primarily stored as glycogen. The synthesis and degradation of glycogen are mainly initialized by glycogen synthase (GS) and glycogen phosphorylase (GP),respectively. The present study aimed to examine the glycogen metabolism in fish liver and gills during acute exposure to seawater. In tilapia(Oreochromis mossambicus) gill, GP, GS and glycogen were immunocytochemically colocalized in a specific group of glycogen-rich (GR)cells, which are adjacent to the gill's main ionocytes, mitochondrion-rich(MR) cells. Na+/K+-ATPase activity in the gills, protein expression and/or activity of GP and GS and the glycogen content of the gills and liver were examined in tilapia after their acute transfer from freshwater(FW) to 25‰ seawater (SW). Gill Na+/K+-ATPase activity rapidly increased immediately after SW transfer. Glycogen content in both the gills and liver were significantly depleted after SW transfer, but the depletion occurred earlier in gills than in the liver. Gill GP activity and protein expression were upregulated 1–3 h post-transfer and eventually recovered to the normal level as determined in the control group. At the same time, GS protein expression was downregulated. Similar changes in liver GP and GS protein expression were also observed but they occurred later at 6–12 h post-transfer. In conclusion, GR cells are initially stimulated to provide prompt energy for neighboring MR cells that trigger ion-secretion mechanisms. Several hours later, the liver begins to degrade its glycogen stores for the subsequent energy supply.
Differences in membrane acyl phospholipid composition between an endothermic mammal and an ectothermic reptile are not limited to any phospholipid class
Authors: Mitchell Todd W. , Ekroos Kim , Blanksby Stephen J. , Hulbert Anthony J. , Else Paul L. 
Published: September 2007

SUMMARYThis study examined questions concerning differences in the acyl composition of membrane phospholipids that have been linked to the faster rates of metabolic processes in endotherms versus ectotherms. In liver, kidney, heart and brain of the ectothermic reptile, Trachydosaurus rugosus, and the endothermic mammal, Rattus norvegicus, previous findings of fewer unsaturates but a greater unsaturation index (UI) in membranes of the mammal versus those of the reptile were confirmed. Moreover, the study showed that the distribution of phospholipid head-group classes was similar in the same tissues of the reptile and mammal and that the differences in acyl composition were present in all phospholipid classes analysed, suggesting a role for the physical over the chemical properties of membranes in determining the faster rates of metabolic processes in endotherms. The most common phosphatidylcholine (PC) molecules present in all tissues (except brain) of the reptile were 16:0/18:1, 16:0/18:2, 18:0/18:2,18:1/18:1 and 18:1/18:2, whereas arachidonic acid (20:4), containing PCs 16:0/20:4, 18:0/20:4, were the common molecules in the mammal. The most abundant phosphatidylethanolamines (PE) used in the tissue of the reptile were 18:0/18:2, 18:0/20:4, 18:1/18:1, 18:1/18:2 and 18:1/20:4, compared to 16:0/18:2, 16:0/20:4, 16:0/22:6, 18:0/20:4, 18:0/22:6 and 18:1/20:4 in the mammal. UI differences were primarily due to arachidonic acid found in both PC and PEs, whereas docosahexaenoic acid (22:6) was a lesser contributor mainly within PEs and essentially absent in the kidney. The phospholipid composition of brain was more similar in the reptile and mammal compared to those of other tissues.
The ontogeny of fin function during routine turns in zebrafishDanio rerio
Authors: Danos Nicole , Lauder George V. 
Published: September 2007

SUMMARYZebrafish Danio rerio exhibit spontaneous, routine turns as part of their normal foraging behavior from the early free-swimming stage to adulthood. Given the importance of this behavior and its pervasiveness during zebrafish life history, the functional requirements of routine turning should play an important role in development. Conversely, the ontogeny of turning performance should reflect morphological development. In this paper we analyze the kinematics of routine turning during ontogeny in zebrafish and compare the scaling of turning kinematics to predictions from two existing models. Twenty-nine fish ranging in size from 0.38 to 1.97 cm in fork length(FL) were filmed at 1000 frames s–1 while performing routine turns. Images were analyzed using image cross-correlation to calculate body and fin velocities. We performed piecewise linear regression to identify variables that do not have a constant rate of change across ontogeny and found that two variables, turn angle and angular velocity, have a transition in slope at a body size of approximately 1 cm. Other variables show a constant positive (pectoral and caudal fin velocity, turn duration), negative (body curvature) or zero (head velocity) rate of change across ontogeny. We interpret these trends in light of morphological changes over ontogeny as well as relevant hydrodynamic conditions. We also compare the slope of the log-transformed variables to predictions from two scaling models of change in function with increasing size. We find mixed support for both models with no single model being better at predicting a single type of variable such as linear velocities. We conclude that morphological development of the paired and median fins and of the skeleton, is an important factor in determining the performance of routine turning over ontogeny. Three-dimensional kinematics and ecological behavior information will further elucidate the ontogenetic patterns observed here.
Timing is everything: coordination of strike kinematics affects the force exerted by suction feeding fish on attached prey
Authors: Holzman Roi , Day Steven W. , Wainwright Peter C. 
Published: September 2007

SUMMARY
During aquatic suction feeding, the predator opens its mouth and rapidly expands its buccal cavity, generating a flow field external to the mouth. The rapid expansion of the buccal cavity produces high fluid velocities and accelerations that extend only a short distance from the mouth (about half of one mouth diameter), and only persist for several milliseconds. Therefore, the predator must precisely time its strike to locate the prey within the narrow region of high flow, during the brief period when flow is at its peak. With flow being the agent for transferring force to the prey, the predator may enhance these forces by producing higher water velocities and faster acceleration at the mouth, but also through increasing the strike's accuracy,i.e. locating the prey closer to the mouth at the instant of peak flow speed. The objectives of this study were to directly measure forces exerted by bluegill Lepomis macrochirus on their prey and to determine how bluegill modify force output. Bluegill were offered ghost shrimp tethered to a load cell that recorded force at 5000 Hz, and feeding sequences were synchronously recorded using 500 Hz video. Peak forces exerted on attached 20 mm shrimp ranged from 0.005 N to 0.506 N. In accordance with the short duration of the strikes (average time to peak gape of ∼13 ms), the forces recorded were brief (∼12 ms from initiation to peak force), and force magnitude declined rapidly after peak force. Statistical analysis indicated that rate of buccal expansion, and prey size, but not strike initiation distance, significantly affected peak force. These observed variables were used with results from flow visualization studies to estimate the flow at the prey's location, which allowed the calculation of drag, pressure gradient force and acceleration reaction force. The relationship between these calculated forces and the measured forces was strong, indicating that the model can be used to estimate forces from strike kinematics. This model was then used to study the effects of strike initiation distance on peak force and on the rate of increasing force. Comparisons of model output to empirical results indicated that bluegill time their strike so as to exert an average of∼70% of the peak possible force on the prey, and that the observed strike initiation distance corresponded to the distance that maximized modeled force on an attached prey. Our results highlight the ability of bluegill to produce high forces on their prey, and indicate that precision and visual acuity play important roles in prey acquisition, beyond their recognized role in prey detection.