bluuebunny/crossref_metadata_2025_split huggingface dataset:
What saplings can tell us about forest expansion over natural grasslands
Authors: Duarte Leandro da S. , Machado Rafael E. , Hartz Sandra M. , Pillar Valério D. 
Published: February 2009

AbstractQuestions: 1. Do the species composition, richness and diversity of sapling communities vary significantly in differently sized patches? 2. Do forest patches of different sizes differ in woody plant colonization patterns?Location: São Francisco de Paula, Rio Grande do Sul, Brazil, 29°28'S,50°13'W.Methods: Three woody vegetation types, differing in structural development (patch size) and recovering for 10 years from cattle and burning disturbances, were sampled on grassland. We analysed the composition and complexity of the woody sapling communities, through relative abundance, richness and diversity patterns. We also evaluated recruitment status (residents vs. colonizers) of species in communities occurring in different forest patch size classes. Results: 1. There is a compositional gradient in sapling communities strongly associated with forest patch area. 2. Richness and diversity are positively correlated to patch area, but only in poorly structured patches; large patches present richness and diversity values similar to small patches. 3. Resident to colonizer abundance ratio increases from nurse plants to large patches. The species number proportion between residents and colonizers is similar in small and large patches and did not differ between these patch types. 4. Large patches presented a high number of exclusive species, while nurse plants and small patches did not.Conclusions: Woody plant communities in Araucaria forest patches are associated with patch structure development. Richness and diversity patterns are linked to patch colonization patterns. Generalist species colonize the understorey of nurse plants and small patches; resident species cannot recruit many new individuals. In large patches, sapling recruitment by resident adults precludes the immigration of new species into the patches, limiting richness and diversity.
Statistical determination of diagnostic species for site groups of unequal size
Authors: Tichy Lubomír , Chytry Milan 
Published: February 2009

AbstractAim: Concentration of species occurrences in groups of classified sites can be quantified with statistical measures of fidelity, which can be used for the determination of diagnostic species. However, for most available measures fidelity depends on the number of sites within individual groups. As the classified data sets typically contain site groups of unequal size, such measures do not enable a comparison of numerical fidelity values of species between different site groups. We therefore propose a new method of measuring fidelity with presence/absence data after equalization of the size of the site groups. We compare the properties of this new method with other measures of statistical fidelity, in particular with the Dufrêne‐Legendre Indicator Value (IndVal) index.Methods: The size of site groups in the data set is equalized, while relative frequencies of species occurrence within and outside of these groups are kept constant. Then fidelity is calculated using the phi coefficient of association.Results: Fidelity values after equalization are independent of site group size, but their numerical values vary independently of the statistical significance of fidelity. By changing the size of the target site group relative to the size of the entire data set, the fidelity measure can be made more sensitive to either common or rare species. We show that there are two modifications of the IndVal index for presence/absence data, one of which is also independent of the size of site groups.Conclusion: The phi coefficient applied to site groups of equalized size has advantages over other statistical measures of fidelity based on presence/absence data. Its properties are close to an intuitive understanding of fidelity and diagnostic species in vegetation science. Statistical significance can be checked by calculation of another fidelity measure that is a function of statistical significance, or by direct calculation of the probability of observed species concentrations by Fisher's exact test. An advantage of the new method over IndVal is its ability to distinguish between positive and negative fidelity. One can also weight the relative importance of common and rare species by changing the equalized size of the site groups.
Non‐parametric habitat models with automatic interactions
Authors: McCune Bruce 
Published: February 2009

AbstractQuestions:Can a statistical model be designed to represent more directly the nature of organismal response to multiple interacting factors? Can multiplicative kernel smoothers be used for this purpose? What advantages does this approach have over more traditional habitat modelling methods?Methods:Non‐parametric multiplicative regression (NPMR) was developed from the premises that: the response variable has a minimum of zero and a physiologically‐determined maximum, species respond simultaneously to multiple ecological factors, the response to any one factor is conditioned by the values of other factors, and that if any of the factors is intolerable then the response is zero. Key features of NPMR are interactive effects of predictors, no need to specify an overall model form in advance, and built‐in controls on overfitting. The effectiveness of the method is demonstrated with simulated and real data sets.Results:Empirical and theoretical relationships of species response to multiple interacting predictors can be represented effectively by multiplicative kernel smoothers. NPMR allows us to abandon simplistic assumptions about overall model form, while embracing the ecological truism that habitat factors interact.
The influence of multi‐scale environmental variables on the distribution of terricolous lichens in a fog desert
Authors: Lalley Jennifer S. , Viles Heather A. , Copeman Neil , Cowley Catherine 
Published: February 2009

AbstractQuestion:How do environmental variables in a hyper‐arid fog desert influence the distribution patterns of terricolous lichens on both macro‐ and micro‐scales?Location:Namib Desert, Namibia.Methods:Sites with varying lichen species cover were sampled for environmental variables on a macro‐scale (elevation, slope degree, aspect, proximity to river channels, and fog deposition) and on a micro‐scale (soil structure and chemistry). Macro‐scale and micro‐scale variables were analysed separately for associations with lichen species cover using constrained ordination (DCCA) and unconstrained ordination (DCA). Explanatory variables that dominated the first two axes of the constrained ordinations were tested against a lichen cover gradient.Results:Elevation and proximity to river channels were the most significant drivers of lichen species cover in the macro‐scale DCCA, but results of the DCA suggest that a considerable percentage of variation in lichen species cover is unexplained by these variables. On a micro‐scale, sediment particle size explained a majority of lichen community variations, followed by soil pH. When both macro and micro‐scale variables were tested along a lichen cover gradient, soil pH was the only variable to show a significant relationship to lichen cover.Conclusion:The findings suggest that landscape variables contribute to variations in lichen species cover, but that stronger links occur between lichen growth and small‐scale variations in soil characteristics, supporting the need for multi‐scale approaches in the management of threatened biological soil crust communities and related ecosystem functions.
Grazing effects on the species‐area relationship: Variation along a climatic gradient in NE Spain
Authors: de Bello Francesco , Lepš Jan , Sebastià Maria‐Teresa 
Published: February 2009

AbstractQuestions: Does grazing have the same effect on plant species richness at different spatial scales? Does the effect of spatial scale vary under different climatic conditions and vegetation types? Does the slope of the species‐area curve change with grazing intensity similarly under different climatic conditions and vegetation types?Location: Pastures along a climatic gradient in northeastern Spain.Methods: In zones under different regimes of sheep grazing (high‐, low‐pressure, abandonment), plant species richness was measured in different plot sizes (from 0.01 to 100 m2) and the slope of the species‐area curves was calculated. The study was replicated in five different locations along a climatic gradient from lowland semi‐arid rangelands to upland moist grasslands.Results: Species richness tended to increase with grazing intensity at all spatial scales in the moist upland locations. On the contrary, in the most arid locations, richness tended to decrease, or remain unchanged, with grazing due to increased bare soil. Grazing differentially affected the slope (z) of the species‐area curve (power function S=c Az) in different climatic conditions: z tended to increase with grazing in arid areas and decrease in moist‐upland ones. ß‐diversity followed similar pattern as z.Conclusions: Results confirm that the impact of grazing on plant species richness are spatial‐scale dependent. However, the effects on the species‐area relationship vary under different climatic conditions. This offers a novel insight on the patterns behind the different effects of grazing on diversity in moist vs. arid conditions reported in the literature. It is argued that the effect of spatial scale varies because of the different interaction between grazing and the intrinsic spatial structure of the vegetation. Variations in species‐area curves with grazing along moisture gradients suggest also a different balance of spatial components of diversity (i.e. a‐ and ß‐diversity).
Variation in plant performance in a grassland: Species‐specific and neighbouring root mass effects
Authors: Herben Tomáš , Brezina Stanislav , Skálová Hana , Hadincová Vera , Krahulec František 
Published: February 2009

AbstractQuestion: What characteristics of local biotic neighbourhood is the best proxy of competitive effects experienced by plants in a herbaceous community: (1) total above‐ground biomass, (2) root mass or (3) relative above‐ground abundance of selected species?Location: Grassland at ca. 1100 m a.s.l. in the Krkonoše Mts., northern Czech Republic.Methods: We implanted two phytometer species, Antho‐xanthum alpinum and Festuca rubra, into a mountain grassland, and examined their response to local variation in (1) total above‐ground biomass, (2) root mass at three soil depths, and (3) relative abundance of individual species above‐ground. Results: Performance of both phytometer species was determined much more consistently by the mass of neighbouring roots and by species composition of neighbours than by the total above‐ground biomass. The two phytometer species showed different responses to these parameters. The most important relationships were (1) negative relationship between performance of Anthoxanthum and mass of neighbouring roots at 0–3 cm, (2) positive relationship between performance of Festuca and mass of neighbouring roots at 3–6 cm, and (3) negative relationship between performance of Festuca and relative abundance of Festuca in the neighbourhood.Conclusions: Neighbouring root mass and above‐ground species composition are better determinants of biotic interactions than total above‐ground biomass of neighbours in the studied mountain grassland. However, the relationships found are not necessarily due to variation in competitive intensity but can be due to other hidden factors as well, e.g. local availability of resources.
Invasion of woody species into temperate grasslands: Relationship with abiotic and biotic soil resource heterogeneity
Authors: Pärtel Meelis , Helm Aveliina 
Published: February 2009

AbstractQuestion:Invasion of woody species into grasslands is a global phenomenon. This is also topical in semi‐natural temperate grasslands that are no longer profitable for agricultural management. Trees and grasses interact through harsh root competition, but below‐ground processes have been neglected in the dynamics of semi‐natural grasslands. Trees are thought to have a competitive advantage in resource‐rich and heterogeneous soils. We tested whether soil resource quantity and heterogeneity differ between paired temperate semi‐natural grasslands and forests (former grasslands), and whether this was caused abiotically by varying soil depth or biotically by fine roots.Location:Thin‐soil calcareous alvar grasslands with overgrown parts (youngPinus sylvestrisforests) in W. Estonia.Methods:The quantity and spatial heterogeneity of soil resources (moisture and nutrients), soil depth, and root parameters (mass, length and specific length) were measured in 1‐m transects of 11 samples in 26 paired grasslands and forests. The quantity and heterogeneity of soil resources were compared between vegetation types and related to soil depth and root parameters.Results:Soil resources were lower and more heterogeneous in forests than in grasslands. The invasion of woody species was enhanced abiotically by deeper soil. Root mass was larger in the forests, but root length was longer in the grasslands. Both root mass and specific root length were more heterogeneous in the forests. Forest root length was negatively correlated with transient soil moisture patches and positively correlated with more persistent nutrient‐rich patches. No such relationship was found in grasslands.Conclusions:Abiotic soil heterogeneity (local deep‐soil patches) supports woody species invasion, but the trees themselves also biotically make soils more heterogeneous, which further enhances woody species invasion. Large trees use soil resources patchily, making soils biotically poorer and more heterogeneous in resources. The dynamics of temperate semi‐natural grasslands are strongly linked to below‐ground ecological processes, and high soil heterogeneity can be both the cause and the outcome of woody species invasion.
Edge effects on epiphytic communities in a Mediterranean Quercus pyrenaica forest
Authors: Belinchón Rocío , Martínez I. , Escudero A. , Aragón G. , Valladares F. 
Published: February 2009

AbstractQuestion: What are the edge effect responses of epiphytic lichen communities in Mediterranean Quercus pyrenaica forest?Location: Central Spain.Methods: We established ten transects perpendicular to a road dissecting a well conserved remnant of Q. pyrenaica forest into two sections. Transects extended from the forest/road edge to 100 m into the forest. Data were collected from seven plots in each transect at different distances from the edge. Variables were grouped into stand scale variables (distance to edge, number of trees per plot, mean diameter per plot, irradiance) and tree scale variables (diameter and height of sampled trees, aspect of the sampled square and relative height of the square). We used General Mixed Linear Models and constrained ordination techniques to test the hypothesis that the spatio‐temporal heterogeneity of light and water controls the occurrence of lichens and bryophytes along the edge‐interior gradient in the Q. pyrenaica forest.Results: Microclimatic parameters vary in a non‐linear way; edge and interior stands showed the most divergent and extreme values. Although the micro‐environment within Mediterranean forests is heterogeneous, interior conditions are apparently suitable for the performance of some specific forest epiphytes. Consequently, species richness does not show significant differences along the gradient. Total epiphytic cover increases towards the forest interior, but distance to the edge together with other predictors at the tree scale (aspect and height of the square) are the most relevant predictors for the composition and structure of these communities.Conclusions: Composition and structure of epiphytic communities in a Mediterranean semi‐deciduous forest are affected by the edge between the forest and the road constructed. Since some extremely rare lichens only occur at interior stands, the conservation of these threatened elements requires urgent conservation measures because well preserved and unmanaged forests in the Mediterranean region are very rare.
Harvester ants (Messor barbarus) as disturbance agents in Mediterranean grasslands
Authors: Azcárate Francisco M. , Peco Begoña 
Published: February 2009

AbstractQuestions:1. Do disturbances by harvester ants (Messor barbarusL.) affect soil properties? 2. Do they alter seed distribution? 3. Do they show a different species composition? 4 Are these changes related to seed size (length and weight)?Location:Mediterranean grasslands in central Spain, near Madrid.Methods:We recorded autumn seed banks and spring vegetation in middens, trunk trails and controls. Soil properties were also measured in middens and controls. The effect of seed weight and length was analysed after transforming data into phylogenetically independent contrasts.Results:Soil under middens is more silty and higher in potassium, organic matter and pH. Seed density and seed bank species richness increased greatly in middens, while vegetation species richness was significantly lower in comparison to control samples. Abundance changes in this disturbance type were positively correlated with seed weight, both in seed bank and vegetation. In contrast, we only detected a slight increase in bare ground on foraging trunk trails, with no clear effects on seed bank and vegetation composition.Conclusions:Midden development is a mechanism that generates heterogeneity which favours the survival of certain large‐seeded species mainly predated by ants in Mediterranean grasslands. This effect may partially neutralize the dominance of small seeded species expected from the seed predation process.
Post‐fire regeneration of Mediterranean plant communities at a regional scale is dependent on vegetation type and dryness
Authors: Arnan Xavier , Rodrigo Anselm , Retana Javier 
Published: February 2009

AbstractQuestion: We tested whether (1) the change in composition and structure of whole plant communities after fire is directly related to regeneration of the dominant tree species in the canopy; (2) the change in structure and composition of plant communities several years after fire decreases with the proportion of obligate seeders and (3) the proportion of obligate seeders in plant communities increases with the dryness gradient.Location: Catalonia (NE Spain)Methods: We measured floristic differences between burned and long‐since burned sites in eight vegetation types across a climate gradient. We compared 22 sites burnt in 1994 in paired plots with 22 sites that had not been burnt since the 1940s. In each site we placed plots in burned and long‐since burned areas, where we identified the presence and abundance of all plant species.Results: When the tree canopy recovers, structure and composition of the vegetation also return to the long‐since burned community; when tree canopy does not recover, composition of the post‐fire community varies compared to the long‐since burned one. A higher proportion of obligate seeders in the pre‐fire community promotes quicker regeneration of the original community. The proportion of obligate seeders increased along the dryness gradient.Conclusions: Regeneration of plant communities after fire depends on the vegetation type before the fire. Regeneration increases when the dominant tree or shrub species persists after fire and with a higher proportion of obligate seeders in the pre‐fire community. The proportion of obligate seeders varies along the dryness gradient, which suggests that vegetation in drier areas (when seeders are more abundant) recovers earlier than in moister areas.
Seed bank diversity in mesic grasslands in relation to vegetation type, management and site conditions
Authors: Wellstein Camilla , Otte Annette , Waldhardt Rainer 
Published: February 2009

AbstractQuestions: 1. Do different management types (i.e. hay meadow, silage meadow, meadow‐pasture, pasture) have different impact on the size and composition of the seed bank of mesic grassland (Arrhenatheretalia)? 2. How strong is the effect of management on the seed bank in relation to above‐ground vegetation, edaphic factors and land‐use history? 3. Are there differences in C‐S‐R plant strategy types and seed longevity under different management regimes?Location: Lahn‐Dill Highlands in central‐western Germany. Methods: Above‐ground vegetation and the soil seed bank of 63 plots (at 21 sites) in mesic grasslands were studied. Differences between management types in quantitative seed bank traits and functional characteristics were tested by ANOVA. The impact of management, above‐ground vegetation, site conditions and land‐use history on seed bank composition were analysed by partial CCA.Results: Management had no significant impact on species richness and density of the seed bank but significantly influenced their floristic composition and functional characteristics. CCA revealed that even after adjustment for soil chemical parameters and above‐ground vegetation management still had significant impact on seed bank composition. ANOVA revealed that silage meadows contained higher proportions of R‐strategy compared to hay meadows. In contrast, in hay meadows and meadow‐pastures proportions of S‐strategy were higher than in silage meadows.Conclusions: The type of grassland management has little impact on quantitative seed bank traits. Management types with a high degree of disturbance lead to an increase of species following a ruderal strategy in the seed bank. Irrespective of management type only a limited proportion of characteristic grassland species is likely to re‐establish from the seed bank after disappearance from above‐ground vegetation.
Relationships between soil hydrology and forest structure and composition in the southern Brazilian Amazon
Authors: Jirka Stefan , McDonald Andrew J. , Johnson Mark S. , Feldpausch Ted R. , Couto Eduardo G. , Riha Susan J. 
Published: February 2009

AbstractQuestion: Is soil hydrology an important niche‐based driver of biodiversity in tropical forests? More specifically, we asked whether seasonal dynamics in soil water regime contributed to vegetation partitioning into distinct forest types.Location: Tropical rain forest in northwestern Mato Grosso, Brazil.Methods: We investigated the distribution of trees and lianas ≥ 1 cm DBH in ten transects that crossed distinct hydrological transitions. Soil water content and depth to water table were measured regularly over a 13‐month period.Results: A detrended correspondence analysis (DCA) of 20 dominant species and structural attributes in 10 × 10 m subplots segregated three major forest types: (1) high‐statured upland forest with intermediate stem density, (2) medium‐statured forest dominated by palms, and (3) low‐statured campinarana forest with high stem density. During the rainy season and transition into the dry season, distinct characteristics of the soil water regime (i.e. hydro‐indicators) were closely associated with each vegetation community. Stand structural attributes and hydro‐indicators were statistically different among forest types.Conclusions: Some upland species appeared intolerant of anaerobic conditions as they were not present in palm and campinarana sites, which experienced prolonged periods of saturation at the soil surface. A shallow impermeable layer restricted rooting depth in the campinarana community, which could heighten drought stress during the dry season. The only vegetation able to persist in campinarana sites were short‐statured trees that appear to be well‐adapted to the dual extremes of inundation and drought.