bluuebunny/crossref_metadata_2025_split huggingface dataset:
Refining vegetation simulation models: From plant functional types to bioclimatic affinity groups of plants
Authors: Laurent J.‐M. , Bar‐Hen A. , François L. , Ghislain M. , Cheddadi R. 
Published: February 2009

AbstractQuestion:How to refine simulations based on a global vegetation model in order to apply it to regional scale?Location:Europe from 35° N to 71° N and 25° W to 70° E.Methods:Geographical ranges of European plants were georeferenced and used with monthly mean climatic data (diurnal temperature ranges, ground frost frequencies, precipitation, relative humidity, rain frequencies, amount of sunshine hours and temperature) and growing degree days to infer climatic boundaries for 320 taxa. We performed a discriminant analysis to define their potential geographic ranges. Hierarchical clustering was computed on potential ranges.Results:Clustering provided 25 Bioclimatic Affinity Groups (BAG) of plants consisting of 13 tree, seven shrub and five herb groups. These B AGs are characterized by different geographical ranges and climatic tolerances and requirements.Conclusion:The use of monthly data instead of annual values improved the prediction of potential distribution ranges and highlighted the importance of climate seasonality for defining the plant groups with accuracy. The B AGs are detailed enough to provide finer reconstructions and simulations of the vegetation at the regional scale.
Effect of error in the DEM on environmental variables for predictive vegetation modelling
Authors: Van Niel Kimberly P. , Laffan Shawn W. , Lees Brian G. 
Published: February 2009

AbstractQuestion: Predictive vegetation modelling relies on the use of environmental variables, which are usually derived from abase data set with some level of error, and this error is propagated to any subsequently derived environmental variables. The question for this study is: What is the level of error and uncertainty in environmental variables based on the error propagated from a Digital Elevation Model (DEM) and how does it vary for both direct and indirect variables?Location: Kioloa region, New South Wales, AustraliaMethods: The level of error in a DEM is assessed and used to develop an error model for analysing error propagation to derived environmental variables. We tested both indirect (elevation, slope, aspect, topographic position) and direct (average air temperature, net solar radiation, and topographic wetness index) variables for their robustness to propagated error from the DEM.Results: It is shown that the direct environmental variable net solar radiation is less affected by error in the DEM than the indirect variables aspect and slope, but that regional conditions such as slope steepness and cloudiness can influence this outcome. However, the indirect environmental variable topographic position was less affected by error in the DEM than topographic wetness index. Interestingly, the results disagreed with the current assumption that indirect variables are necessarily less sensitive to propagated error because they are less derived.Conclusions: The results indicate that variables exhibit both systematic bias and instability under uncertainty. There is a clear need to consider the sensitivity of variables to error in their base data sets in addition to the question of whether to use direct or indirect variables.
Slow recovery in desert perennial vegetation following prolonged human disturbance
Authors: Guo Qinfeng 
Published: February 2009

AbstractQuestions: How long may it take for desert perennial vegetation to recover from prolonged human disturbance and how do different plant community variables (i.e. diversity, density and cover) change during the recovery process?Location: Sonoran Desert, Arizona, USA.Methods: Since protection from grazing from 1907 onwards, plant diversity, density and cover of perennial species were monitored intermittently on ten 10 m × 10 m permanent plots on Tumamoc Hill, Tucson, Arizona, USA.Results: The study shows an exceptionally slow recovery of perennial vegetation from prolonged heavy grazing and other human impacts. Since protection, overall species richness and habitat heterogeneity at the study site continued to increase until the 1960s when diversity, density and cover had been stabilized. During the same period, overall plant density and cover also increased. Species turnover increased gradually with time but no significant relation between any of the three community variables and precipitation or Palmer Drought Severity Index (PDSI) was detected.Conclusions: It took more than 50 yr for the perennial vegetation to recover from prolonged human disturbance. The increases in plant species richness, density, and cover of the perennial vegetation were mostly due to the increase of herbaceous species, especially palatable species. The lack of a clear relationship between environment (e.g. precipitation) and community variables suggests that site history and plant life history must be taken into account in examining the nature of vegetation recovery processes after disturbance.
Vascular plant compositional gradients within and between Iowa fens
Authors: Nekola Jeffery C. 
Published: February 2009

AbstractQuestion: What is the nature and relative importance of compositional gradients within‐ and between fens?Location: Iowa, USA.Methods: 506 0.5 m × 0.5 m quadrats were sampled from 31 fens across a 550 km extent. Presence/absence of all vascular plant taxa, plus the non‐vascular genera Sphagnum and Chara, and values for 24 environmental variables were noted. Global Non‐Metric Multidimensional Scaling and Monte Carlo tests were used to describe compositional variation and identify significant environmental co‐variables. Model‐based cluster analysis was used to identify the optimal number of groups supported by the data, while k‐means clustering was used to assign each quadrat to a group. The number of occurrences (and frequency) of each species within each group was calculated. Two‐dimensional 95% Gaussian confidence intervals, ANOVA, correlation coefficient homogeneity tests, log‐linear modelling, and Fisher's exact tests were used to document patterns of compositional change.Results: Two stable axes of variation were identified: the first being most closely correlated with soil pH, Mg, Ca, P, S, vegetation height, surface and −10 cm soil temperature, site area, perimeter, perimeter/area ratio, growing season, and air temperature, with the second being most correlated to soil moisture, N, disturbance level, % organic matter, hummock height, N‐S coordinate, and precipitation. Individual sites harboured between 20–47% of total compositional variation, with 28% of Axis 1 and 55% of Axis 2 scores being contained within‐sites. Five compositional regions were identified that differed in the proportion of calciphile and hydrophile species. Compositional groups differed significantly between geologic types.Conclusions: While the principal axis of variation (corresponding to the rich‐poor fen gradient) is present largely between sites, the second axis (corresponding to water level) is largely repeated within sites. Documentation and protection of vegetation patterns and species diversity within Iowa fens will thus require consideration of multiple sites across the landscape.
Competitive exclusion and the No‐Interaction model operate simultaneously in microcosm plant communities
Authors: Chiarucci Alessandro , Alongi Carmela , Wilson J. Bastow 
Published: February 2009

AbstractQuestion: Is the relation between productivity and species richness due to an increase in plant size and hence a reduced plant density?Location: Glasshouse experiment.Methods: Productivity was manipulated with fertilizer and irrigation in a microcosm experiment. The ‘sampling effect’ was removed using rarefaction to a common density of individual plants per pot.Results: Fertility increased community biomass towards an asymptotic maximum, and reduced the light passing through plant canopies towards an asymptotic minimum. As biomass increased, so did species richness. However, this did not seem to be a direct effect of productivity on species richness, but rather one mediated by plant density, since: (1) the richness/ density relation was stronger than the richness/biomass one; (2) adding biomass to the richness/density regression did not increase its predictivity; (3) the richness/biomass relation was removed by rarefaction to 200 individuals per pot. It is therefore concluded that the richness/biomass relation observed was due to the sampling effect. Rarefaction to a small number of plants gave a quite different trend: lower richness at high biomass. This seems to be due to an increased number of subordinate species at high community biomass, and a more uneven distribution of abundance.Conclusion: The Competitive Exclusion and No‐Interaction hypotheses have been seen as alternatives. We suggest that they can operate simultaneously.
A spatio‐temporal framework for efficient inventories of natural resources: A case study with submersed macrophytes
Authors: Schmieder K. , Lehmann A. 
Published: February 2009

AbstractQuestions: Does a reduced nutrient load in open water increase species richness and the importance of regional and local site characteristics for species abundance and spatial distribution? Can we build lake‐specific models of macrophyte abundance and distribution based on site characteristics in order to prepare a cost‐efficient framework for future surveys?Location: Lake Constance, 47°39′N, 9°18′E.Methods: Generalized additive models (GAMs) were used to predict the potential distributions of eight species and overall species richness. Submersed macrophyte distribution in 1993 was compared with corresponding data from 1978, when eutrophication was at its maximum.Results: Spatial predictions for eight species and overall species richness were relatively accurate and independent of water chemistry. Depth was confirmed as a main predictor of species distribution, while effective fetch distance was retained in many models. Mineralogical variables of sediment composition represent allogenic and autogenic sediment sources and their east‐west gradient in Lake Constance corresponded to east‐west gradients of species distribution and richness. GAMs appeared more efficient than generalized linear models (GLMs) for modelling species responses to environmental gradients.Conclusions: Reduced trophic status increases species richness and the importance of regional and local site characteristics for species abundance and distribution. Our models represent a spatio‐temporal framework for future lake monitoring purposes and allow the development of effective monitoring; this could be generalized for many ecosystem types and would be particularly efficient for large lakes such as Lake Constance.
Advances in spatial, individual‐based modelling of forest dynamics
Authors: Busing Richard T. , Mailly Daniel 
Published: February 2009

AbstractMany individual‐based models of forest dynamics lack spatial complexity. Although, in certain cases, spatially simple models may not be substantially inferior to spatially complex models, advances in vegetation science indicate potential weaknesses, particularly the lack of consideration of propagule availability in horizontal space, and varying patch (or canopy gap) dimensions. Models with vertical and horizontal spatial complexity can address these issues, but, thus far, evidence that they outperform patch (or gap) models is limited. Comparison of projections from models that differ only in their spatial complexity is needed to address the effects of propagule availability in space, spatial pattern of canopy tree mortality, and spatial resolution.
Patterns of functional clonal traits and clonal growth modes in contrasting grasslands in the central Apennines, Italy
Authors: Halassy Melinda , Campetella Giandiego , Canullo Roberto , Mucina Ladislav 
Published: February 2009

Abstract. Aim: Patterns of plant functional traits related to clonality (clonal growth modes; CGM) in plant communities were studied and hypotheses on the importance of the selected traits in plant communities supported by soils differing in moisture and nutrient status were tested.Material and Methods: Selected plant functional traits, such as the position of the mother‐daughter plants connections, length of spacers, frequency of multiplication, persistency of ramets connections, presence of storage organs and bud protection were studied in two contrasting plant communities (xeric and mesic abandoned pastures) typical of central Apennines, Italy.Results and Discussion: Clonality was shown to be of great importance in both mesic and xeric grasslands. The major differences between the two communities were due to the dominant CGMs: turf graminoids (having effective protection of growth meristems in dense tussocks) dominated xeric grasslands, while rhizomatous graminoids (typical of competitive resource‐rich environments) dominated mesic grasslands. Below‐ground CGOs (clonal growth organs), shorter spacers, higher multiplication potential, permanent ramet connection, large bud bank and increased importance of bud protection were found to be of importance in water stressed xeric grassland. Contrary to our expectations, the mesic (less stressed) grasslands have the higher number of clonal plants possessing storage organs.
Effects of grazing on patch structure in a semi‐arid two‐phase vegetation mosaic
Authors: Cipriotti Pablo A. , Aguiar Martin R. 
Published: February 2009

Abstract. Question: What are the grazing effects in the spatial organization and the internal structure of high and low cover patches from a two‐phase vegetation mosaic?Location: Patagonian steppe, Argentina.Methods: We mapped vegetation under three different grazing conditions: ungrazed, lightly grazed and heavily grazed. We analysed the spatial patterns of the dominant life forms. Also, in each patch type, we determined density, species composition, richness, diversity, size structure and dead biomass of grasses under different grazing conditions.Results: The vegetation was spatially organized in a two‐phase mosaic. High cover patches resulted from the association of grasses and shrubs and low cover patches were represented by scattered tussock grasses on bare ground. This spatial organization was not affected by grazing, but heavy grazing changed the grass species involved in high cover patches and reduced the density and cover of grasses in both patch types. Species richness and diversity in high cover patches decreased under grazing conditions, whereas in low cover patches it remained unchanged. Also, the decrease of palatable grasses was steeper in high cover patches than in low cover patches under grazing conditions.Conclusions: We suggest that although grazing promotes or inhibits particular species, it does not modify the mosaic structure of Patagonian steppe. The fact that the mosaic remained unchanged after 100 years of grazing suggests that grazing does not compromize population processes involved in maintaining patch structure, including seed dispersal, establishment or biotic interactions among life forms.
Effects of vegetation canopy and climate on seedling establishment in Mediterranean shrubland
Authors: Lloret Francisco , Peñuelas Josep , Estiarte Marc 
Published: February 2009

Abstract. Question: Does the influence of plant canopy on seedling establishment interact with climate conditions, and particularly, do intensified drought conditions, enhance a positive effect of the vegetation canopy on seedlings in Mediterranean‐type ecosystems.Location: Mediterranean shrubland near Barcelona, Spain at 210 m a.s.l.Methods: Over the course of four years we recorded seedling emergence and survival in open areas and below vegetation under control, drier and warmer experimental climatic conditions.Results: Seedling emergence is more sensitive to climate conditions than later stages of growth. When considering the whole set of species, the total number of established seedlings at the end of the experiment was lower in the drought and warming stands than in control ones, and vegetation canopy increased the number of these seedlings in the drought stands. Drought reduced seedling emergence but not warming, while the interaction between climate treatments and vegetation canopy was not significant. Seedling survival was lower in the warming treatment than in the control. Under drought conditions, vegetation canopy increased seedling emergence of the dominant Globularia alypum. In control stands, vegetation canopy reduced their survival. Vegetation canopy increased the survival of the dominant Erica multiflora in warming stands, and it reduced the survival of G alypum in drought stands. No significant effects of drought and warming were observed in the seed rain of these two species.Conclusions: The balance of the facilitation‐competition interactions between vegetation canopy and seedling establishment in Mediterranean‐type ecosystems determined by water availability, and drought conditions enhance the positive effect of vegetation canopy. This interaction is species‐specific and shows important between‐year variability.
Can differential responses to nutrients explain the success of environmental weeds?
Authors: Hastwell Graeme T. , Panetta F. Dane 
Published: February 2009

Abstract. Question: The use of plant traits to predict weed impact is a long‐standing goal in weed ecology. In particular, trait plasticity, i.e. the variability of a trait response to environmental change, is widely considered to contribute to weed success. However, the generality of the role of trait plasticity in determining weed impacts has never been systematically tested.Methods and location: We tested the hypothesis that high‐impact environmental weeds have greater plasticity in growth responses to nutrient availability than low‐impact species. In a glasshouse experiment, we supplied a complete nutrient solution at five different concentrations to seedlings of 24 species of high‐ and low‐impact environmental weeds from south east Queensland, Australia.Results: Almost all species showed plasticity in biomass accumulation in response to the nutrient treatments, but plasticity in biomass accumulation did not differ between related high‐ and low‐impact species. There was no evidence of nutrient‐related plasticity in root: shoot allocation. Seedling survival was greater at higher nutrient concentrations, and also differed greatly between families. Survival among low‐impact species was marginally (p= 0.0610) lower than among high‐impact species.Conclusion: We conclude that the impact of environmental weeds in south east Queensland cannot be predicted from nutrient‐related plasticity in seedling growth. The effects of nutrients on seedling survival warrant further research.
Refuge effects of a cactus in grazed short‐grass steppe
Authors: Rebollo Salvador , Milchunas Daniel G. , Noy‐Meir Imanuel 
Published: February 2009

Abstract. Question: Which factors influence the effectiveness of biotic refuges for harbouring grazing‐sensitive species in pastures with a long history of grazing by large herbivores? Previous research showed that spiny clumps of the cactus Opuntia polyacantha provided refuges from cattle grazing for plants and for inflorescence production on short‐grass steppe. In this paper, seven factors that may have a potential positive influence on the refuge effects of cactus at a landscape scale were assessed.Location: Short‐grass steppe of the Great Plains of North America.Methods: The study was conducted in eight long‐term grazed pastures and their respective ungrazed controls that were established 60 years ago.Results: Heavy grazing intensities were necessary for some positive effects of cactus to manifest, and some refuge effects changed to negative effects under lower grazing pressure. Refuge effects increased with plant community productivity due to greater abundances of grazing‐sensitive species, and greater grazing intensities in the more productive areas. Cover of cactus cladodes (spine‐covered pads) inside clumps appeared to be the main limiting factor for refuge effects, probably by limiting available space for grazing‐sensitive species in the clumps. Other factors such as size and density of cactus clumps, and the presence of large refuges in the proximity of clumps had minor influence on the effectiveness of cactus refuges.Conclusions: The effects of biotic refuges largely varied with ecological conditions and structural characteristics of the refuge. Refuge effects were mainly influenced by grazing intensity, plant community productivity, and structural characteristics of the biotic refuges. A conceptual model of factors influencing refuge effects at a local landscape scale in plant communities grazed by large herbivores is presented.
A technique for identifying the roots of different species in mixed samples using nuclear ribosomal DNA
Authors: Moore L.A. , Field C.B. 
Published: February 2009

Abstract. Question: Is it possible to determine the species composition of root samples containing multiple species, without first disentangling individual roots?Methods: The internal transcribed spacer (ITS) region of nuclear ribosomal DNA was amplified and sequenced from four California annual grassland species (two Poaceae and two Asteraceae). Restriction enzymes that cut the ITS region of each species into uniquely sized fragments were identified based on DNA sequence variation of the ITS regions. Mixed root samples were analysed to test the ability of the method to identify the presence or absence of each species in multi‐species samples.Results: The technique successfully identified species present in multi‐species samples. ITS regions were shorter in Poaceae than in Asteraceae, so size differences alone were sufficient to distinguish these taxonomic groups. At the species level, digestion of ITS regions with the appropriate restriction enzymes yielded at least one uniquely sized fragment for each species.Conclusions: This method is the first to identify the species composition of mixed root samples. It should be applicable to most plant species because the ITS region is flanked by universal primers and most species have unique ITS sequences. The ability to determine species‐specific rooting distributions has broad applications in vegetation science.
Plant traits and functional types in response to reduced disturbance in a semi‐natural grassland
Authors: Louault F. , Pillar V.D. , Aufrère J. , Garnier E. , Soussana J.‐F. 
Published: February 2009

Abstract. Question: How do functional types respond to contrasting levels of herbage use in temperate and fertile grasslands?Location: Central France (3°1’E, 45°43’N), 870 m a.s.l.Methods: Community structure and the traits of dominant plant species were evaluated after 12 years of contrasted grazing and mowing regimes in a grazing trial, comparing three levels of herbage use (high, medium and low).Results and Conclusions: Of 22 measured traits (including leaf traits, shoot morphology and composition, phenology), seven were significantly affected by the herbage use treatment. A decline in herbage use reduced individual leaf mass, specific leaf area and shoot digestibility, but increased leaf C and dry matter contents. Plants were taller, produced larger seeds and flowered later under low than high herbage use. Nine plant functional response types were identified by multivariate optimization analysis; they were based on four optimal traits: leaf dry matter content, individual leaf area, mature plant height and time of flowering. In the high‐use plots, two short and early flowering types were co‐dominant, one competitive, grazing‐tolerant and moderately grazing‐avoiding, and one grazing‐avoiding but not ‐tolerant. Low‐use plots were dominated by one type, neither hardly grazing‐avoiding nor grazing‐tolerant, but strongly competitive for light.