bluuebunny/crossref_metadata_2025_split huggingface dataset:
Landscape‐scale sexual segregation in the dry season distribution and resource utilization of elephants in Kruger National Park, South Africa
Authors: Smit I. P. J. , Grant C. C. , Whyte I. J. 
Published: February 2009

ABSTRACTThis study compared the dry season distribution of elephant bull groups and mixed herds and the resources driving these distributions within Kruger National Park, South Africa. It is important to understand what resources drive the distribution of elephants as this may be of relevance to understanding and managing their impact. It is also important to distinguish between resource use by bull groups and mixed herds because their impact on the habitat may differ. Our results indicated that sexual segregation, both in space and in resource selection, did occur in Kruger Park. Bulls roamed more widely in the park, and although their distribution and resource use overlapped with mixed herds, they also occurred in areas that mixed herds apparently did not, or could not, utilize in the dry season. This gave rise to areas used exclusively by bulls but no areas used exclusively by mixed herds. Lower collective feeding requirements as a result of smaller group size, wider habitat tolerance, and increased mobility as a result of bigger body size, as well as conflict avoidance with musth bulls in areas with mixed herds, might have been some of the reasons for bull groups roaming more widely and for the establishment of separate bull areas. Rivers were an important resource driving both the distribution of the mixed herds and bull groups, but with the mixed herds occurring closer to these resource hot spots than the bull groups. Tree cover proved important for mixed herds, probably because of the importance of shade and the higher nutritional requirements of the smaller‐sized cows and calves. Artificial waterholes might have opened up previously unutilized areas for bulls in the dry season, especially on the grassy basaltic plains in the north of the park. However, the distribution of the mixed herds suggested that they did not occur in higher densities in areas surrounding waterholes.
Predicting patterns of invasion by black cherry (Prunus serotina Ehrh.) in Flanders (Belgium) and its impact on the forest understorey community
Authors: Verheyen Kris , Vanhellemont Margot , Stock Thibout , Hermy Martin 
Published: February 2009

ABSTRACTThe design of cost‐efficient control strategies for invasive species that are too widespread and abundant for complete eradication, at least in the short term, will benefit from a rigorous analysis of invasion patterns and associated effects on native biodiversity. In this paper, the case of the invasive North American tree Prunus serotina in Flanders (Belgium) is presented. Our main objectives were to determine the susceptibility of forest stands to invasion by P. serotina and the subsequent effects of invasion on the understorey community. We used the large database of the first Flemish Forest Inventory. Multiple logistic regressions indicated that P. serotina occurred more frequently in privately owned, younger forest on coarse‐textured, dry soils (podzols), and the combination of these factors allowed us to correctly predict presence/absence of P. serotina in 70% of the validation plots. However, locational variables proved to be important as well, indicating that the invasion process is still ongoing. Prediction of P. serotina densities by means of multiple linear regressions was less successful. Effects on the understorey richness were analysed by comparing the number of species and the mean Ellenberg values between pairs of plots, only differing by the presence of P. serotina in the shrub layer. A reduction of the understorey richness following invasion was only pronounced on the more moist soils, while compositional changes mainly occurred on drier soils. It is concluded that priority for control should be given to landscapes with a low fraction of invaded stands and to forest stands located on more moist soils. However, using its potential to threaten native biodiversity as an argument for control should be done with care as further research is needed whether the observed negative effects are due to a species (i.e. native vs. non‐native) or a density effect (high vs. low).
Altitudinal patterns of seed plant richness in the Gaoligong Mountains, south‐east Tibet, China
Authors: Wang Zhiheng , Tang Zhiyao , Fang Jingyun 
Published: February 2009

ABSTRACTElevational patterns of species richness and their underlying mechanisms have long been a controversial issue in biodiversity and biogeographical research, and several hypotheses have been proposed in the past decades. Local and regional studies have suggested that area and geometric constraint are two of major factors affecting the elevational pattern of species richness. In this study, using data of seed plants and their distribution ranges and a Digital Elevation Model data set, we explored altitudinal patterns of seed plant richness and quantified the effects of area and the mid‐domain effect (MDE) on the richness patterns in a high mountain area, Gaoligong Mountains (ranging from 215 m to 5791 m a.s.l.) located in south‐eastern Tibet, China. The results showed that richness and density (richness/log‐transformed area) of seed plants at species, genus, and family levels all showed hump‐shaped patterns along the altitudinal gradient. The altitudinal changes in richness of species with three different range sizes (< 500 m, 500–1500 m, and > 1500 m), species of different plant life‐forms (trees, shrubs, and herbs), and endemic species further confirmed this finding. Analysis of Generalized Linear Model depicted that although the area of each elevational band was always in high correlation with the species richness, the MDE could explain 84.9%, 33.8%, 83.8%, and 84.5% of the total variation in richness for all species and the three species groups with different range sizes, respectively. This suggests that the MDE significantly influences the patterns of species richness and is likely be stronger for broad‐ranged species than for narrow‐ranged ones in the Gaoligong Mountains.
Updating bird species distribution at large spatial scales: applications of habitat modelling to data from long‐term monitoring programs
Authors: Brotons Lluís , Herrando Sergi , Pla Magda 
Published: February 2009

ABSTRACTMapping of species distributions at large spatial scales has been often based on the representation of gathered observations in a general grid atlas framework. More recently, subsampling and subsequent interpolation or habitat spatial modelling techniques have been incorporated in these projects to allow more detailed species mapping. Here, we explore the usefulness of data from long‐term monitoring (LTM) projects, primarily aimed at estimating trends in species abundance and collected at shorter time intervals (usually yearly) than atlas data, to develop predictive habitat models. We modelled habitat occupancy for 99 species using a bird LTM program and evaluated the predictive accuracy of these models using independent data from a contemporary and comprehensive breeding bird atlas project from the same region. Habitat models from LTM data using generalized linear modelling were significant for all the species and generally showed a high predictive power, albeit lower than that from atlas models. Sample size and species range size and niche breadth were the most important factors behind variability in model predictive accuracy, whereas the spatial distribution of sampling units at a given sample size had minor effects. Although predictive accuracy of habitat modelling was strongly species dependent, increases in sample size and, secondarily, a better spatial distribution of sampling units should lead to more powerful predictive distribution models. We suggest that data from LTM programs, now established in a large number of countries, has the potential for being a major source of good quality data suitable for the estimation and regularly update of distributions at large spatial scales for a number of species.
Sensitivity of predictive species distribution models to change in grain size
Authors: Guisan Antoine , Graham Catherine H. , Elith Jane , Huettmann Falk ,   the NCEAS Species Distribution Modelling Group
Published: February 2009

ABSTRACTPredictive species distribution modelling (SDM) has become an essential tool in biodiversity conservation and management. The choice of grain size (resolution) of environmental layers used in modelling is one important factor that may affect predictions. We applied 10 distinct modelling techniques to presence‐only data for 50 species in five different regions, to test whether: (1) a 10‐fold coarsening of resolution affects predictive performance of SDMs, and (2) any observed effects are dependent on the type of region, modelling technique, or species considered. Results show that a 10 times change in grain size does not severely affect predictions from species distribution models. The overall trend is towards degradation of model performance, but improvement can also be observed. Changing grain size does not equally affect models across regions, techniques, and species types. The strongest effect is on regions and species types, with tree species in the data sets (regions) with highest locational accuracy being most affected. Changing grain size had little influence on the ranking of techniques: boosted regression trees remain best at both resolutions. The number of occurrences used for model training had an important effect, with larger sample sizes resulting in better models, which tended to be more sensitive to grain. Effect of grain change was only noticeable for models reaching sufficient performance and/or with initial data that have an intrinsic error smaller than the coarser grain size.
Assessing changes in habitat quality due to land use changes in the spur‐thighed tortoise Testudo graeca using hierarchical predictive habitat models
Authors: Anadón J. D. , Giménez A. , Martínez M. , Palazón J. A. , Esteve M. A. 
Published: February 2009

ABSTRACTIn this study we propose a model‐building approach based on the hierarchical integration of the main environmental factors (climate, topography/lithology, and land uses) determining the distribution of the spur‐thighed tortoise in south‐east Spain. Data on the presence/absence of the species were primarily based on information derived from interviews to shepherds. The hierarchical modelling exercise consisted of three steps. First, we constructed a model for the entire region using climate variables, thus obtaining a potential climatical model. Second, we introduced variables referring to topography and lithology that fall within the climatic distribution range (potential model). Third, by using this second model as a starting point, we included land use variables to obtain the actual distribution model.We analysed the changes in the values of probability of the presence of this species for a given cell between the potential and the actual model, assessing areas where habitat quality has decreased, been maintained or increased. The spatial representation of these changes was highly coherent. A discriminant analysis linked areas where habitat quality has dropped with agriculture landscapes, whereas those areas where habitat quality has been maintained or increased were located mainly in shrublands. Twenty‐five per cent (479 km2) of the potential distribution of the species became suboptimal when land use was included, which emphasizes the importance of land use changes in both the range dynamics and the conservation of the spur‐thighed tortoise in south‐east Spain.
Endemic vertebrates are the most effective surrogates for identifying conservation priorities among Brazilian ecoregions
Authors: Loyola Rafael D. , Kubota Umberto , Lewinsohn Thomas M. 
Published: February 2009

ABSTRACTMany studies have tested the performance of terrestrial vertebrates as surrogates for overall species diversity, because these are commonly used in priority‐setting conservation appraisals. Using a database of 3663 vertebrate species in 38 Brazilian ecoregions, we evaluated the effectiveness of various subsets for representing diversity of the entire vertebrate assemblage. Because ecoregions are established incorporating information on biotic assemblages, they are potentially more amenable to regional comparison than are national or state lists. We used 10 potential indicator groups (all species; all mammals, birds, reptiles, or amphibians; all endemic species; and endemic species within each class) to find priority sets of ecoregions that best represent the entire terrestrial vertebrate fauna. This is the first time such tests are employed to assess the effectiveness of indicator groups at the ecoregion level in Brazil. We show that patterns of species richness are highly correlated among mammals, birds, amphibians, and reptiles. Furthermore, we demonstrate that ecoregion sets selected according to endemic species richness captured more vertebrate species per unit area than sets based on overall vertebrate richness itself, or than those selected at random. Ecoregion sets based on endemic bird, endemic reptile, or endemic amphibian richness also performed well, capturing more species overall than random sets, or than those selected based on species richness of one or all vertebrate classes within ecoregions. Our results highlight the importance of evaluating biodiversity concordance and the use of indicator groups as well as aggregate species richness. We conclude that priority sets based on indicator groups provide a basis for a first assessment of priorities for conservation at an infracontinental scale. Areas with high endemism have long been highlighted for conservation of species. Our findings provide evidence that endemism is not only a worthwhile conservation goal, but also an effective surrogate for the conservation of all terrestrial vertebrates in Brazil.
Record error and range contraction, real and imagined, in the restricted shrubBanksia hookerianain south‐western Australia
Authors: Miller Ben P. , Enright Neal J. , Lamont Byron B. 
Published: February 2009

ABSTRACTBanksia hookerianaMeissn. (Proteaceae) is a fire‐killed shrub endemic to the northern sandplains of south‐western Australia that could be described as endangered based on its small geographical range (< 5000 km2) and area of occupancy (∼500 km2). Impacts on the species’ geographical range by land clearance for farming and mining, and by altered fire regime, were investigated using three lines of evidence: records of herbarium collections, a comprehensive field survey of extant populations, and air photo and satellite images revealing the recent history of land clearance and fires. These show that the species’ range has contracted by up to 40% in area and 26% latitudinally through the loss of outlier and range limit populations since 1960. In addition, 22% of remaining native shrubland on the Eneabba sandplain has been lost over this period through clearing for farming and mining, representing further habitat loss forB. hookeriana.Detailed investigation ofB.hookerianaherbarium collections (n = 46) revealed important errors that artificially affected the geographical range of the species and emphasized the importance of close examination of all data captured from collection records. Recorded locations occurred hundreds of kilometres outside the current geographical range of the species in areas with different climate and substrate. Incorrect species identification of herbarium specimens further extended the apparent geographical range of the species. On the other hand, credible records indicated the loss of the species from localities at the limits of its range. Overall, a disconcertingly high proportion of records contained errors that may be difficult to identify without close examination of the original collections and detailed ground‐truthing. Were these records to be used to model climate envelopes, identify potential habitat where the species might occur, or might migrate to either as pests or under climate change scenarios, or to analyse evolutionary or ecological theory (for example) — as is now becoming commonplace — large errors may ensue.
Saproxylic beetle diversity in a managed boreal forest: importance of stand characteristics and forestry conservation measures
Authors: McGeoch Melodie A. , Schroeder Martin , Ekbom Barbara , Larsson Stig 
Published: February 2009

ABSTRACTSaproxylic beetles constitute a significant proportion of boreal forest biodiversity. However, the long history of timber production in Fennoscandia has significantly reduced the availability of dead wood and is considered a threat to the conservation of saproxylic beetle assemblages. Therefore, since the mid‐1990s dead wood retention in harvested stands has formed an integral part of silvicultural practices. However, the contribution of this biodiversity‐orientated management approach to conserving saproxylic beetle assemblages in boreal forest landscapes that include production forestry remains largely untested. We examined differences in resident saproxylic beetle assemblages among stands under different management in a boreal forest landscape in Central Sweden, and in particular stands managed according to new conservation‐orientated practices. We also investigated the relationship between beetle diversity and forest stand characteristics. Bark of coarse woody debris (CWD) was sieved for beetles in old managed stands, unmanaged nature reserves, and set‐aside areas, and clear‐cut stands harvested according to certification guidelines [new forestry (NF) clear‐cuts]. All stand types contributed significantly to the total diversity of beetles found. While stand size, position, and distance to nearest reserve were unimportant, both the quality and the quantity of CWD in stands contributed significantly to explaining beetle abundance and species richness. This extends the previous findings for red‐listed invertebrates, and shows that heterogeneous substrate quality and a range of management practices are necessary to maintain saproxylic beetle diversity in boreal forest landscapes that include production forestry. The unique abiotic conditions in combination with the abundant and varied CWD associated with NF clear‐cuts form an important component of forest stand heterogeneity for saproxylic beetles. It is thus essential that sufficient, diverse, CWD is retained in managed boreal landscapes to ensure the conservation of boreal saproxylic beetle assemblages.
Expansion pathways of the exotic common reed (Phragmites australis): a historical and genetic analysis
Authors: Lelong Benjamin , Lavoie Claude , Jodoin Yvon , Belzile François 
Published: February 2009

ABSTRACTUsing 779 herbarium and modern specimens, we reconstructed the spread of the common reed (Phragmites australis) in Quebec, Canada, where large‐scale invasion of this plant species has been reported since the 1960s. All specimens were genetically differentiated using molecular tools to identify the genotype (native or exotic). The exotic genotype (haplotype M) has been present in Quebec as early as 1916, but it was rare prior to the 1970s and was almost exclusively restricted to the shores of the St. Lawrence River. The exotic genotype spread inland only after the beginning of the 1970s. In less than 20 years, a complete shift occurred, from the dominance of native genotypes to the dominance of the exotic genotype. Today, more than 95% of common reed colonies found in Quebec are dominated by the haplotype M. It is especially abundant along roads, but colonies present in marshes are also dominated by the exotic genotype. This study provides evidence that, in Quebec, the development of the highway network in the 1960s and 1970s strongly contributed to the inland expansion of the exotic genotype. Moreover, it shows the usefulness of molecular techniques for reconstructing the spread of an invader. Without the use of molecular tools, the reconstruction of invasions of exotic taxa would be impossible because of the lack of clear phenotypic differences between genotypes.
Limited phylogeographic structure in the flightless ground beetle, Calathus ruficollis, in southern California
Authors: Chatzimanolis Stylianos , Caterino Michael S. 
Published: February 2009

ABSTRACTThe California Floristic Province is home to more than 8000 species of beetles, yet their geographical patterns of supra‐ and infraspecific diversity remain largely unexplored. In this paper, we investigate the phylogeography and population demographics of a flightless ground beetle, Calathus ruficollis (Coleoptera: Carabidae), in southern California. We sampled 136 specimens from 25 localities divided into 10 populations using a fragment of the mitochondrial cytochrome oxidase I gene. We tested several hypotheses, including the association of geography with particular clades and populations, the degree of differentiation among regions, and the expansion of populations. Parsimony and Bayesian phylogenetic analyses along with nested clade analysis and amova indicate a deep split between the southern Sierra Nevada population and populations south and west. This split corresponds closely to the split between subspecies C. ruficollis ignicollis (southern Sierra Nevada) and C. ruficollis ruficollis. Populations otherwise exhibit limited geographical structure, though Fst values indicate some local differentiation. Mismatch distributions and Fu's Fs indicate range expansion of several populations, suggesting that some structure may have been obscured by recent exchange. The population of C. ruficollis on Santa Cruz Island, which might have been expected to be isolated, shares several haplotypes with mainland populations, appearing to represent multiple colonizations.
Can more K‐selected species be better invaders? A case study of fruit flies in La Réunion
Authors: Duyck Pierre‐François , David Patrice , Quilici Serge 
Published: February 2009

ABSTRACTInvasive species are often said to be r‐selected. However, invaders must sometimes compete with related resident species. In this case invaders should present combinations of life‐history traits that give them higher competitive ability than residents, even at the expense of lower colonization ability. We test this prediction by comparing life‐history traits among four fruit fly species, one endemic and three successive invaders, in La Réunion Island. Recent invaders tend to produce fewer, but larger, juveniles, delay the onset but increase the duration of reproduction, survive longer, and senesce more slowly than earlier ones. These traits are associated with higher ranks in a competitive hierarchy established in a previous study. However, the endemic species, now nearly extinct in the island, is inferior to the other three with respect to both competition and colonization traits, violating the trade‐off assumption. Our results overall suggest that the key traits for invasion in this system were those that favoured competition rather than colonization.