bluuebunny/crossref_metadata_2025_split huggingface dataset:
Combined evaluation of bone marrow aspirate and biopsy is superior in the prognosis of multiple myeloma
Authors: Štifter Sanja , Babarović Emina , Valković Toni , Seili-Bekafigo Irena , Štemberger Christophe , Načinović Antica , Lučin Ksenija , Jonjić Nives 
Published: June 2010

Abstract

Background
Estimation of plasma cell infiltrates in bone marrow aspirates (BMA) and bone marrow biopsy (BMB) is a standard method in the diagnosis and monitoring of multiple myeloma (MM). Plasma cell fraction in the bone marrow is therefore critical for the classification and optimal clinical management of patients with plasma cell dyscrasias. The aim of the study was to compare the percentage of plasma cells obtained by both methods with the patient clinical parameters and survival.

Methods
This retrospective study included BMA and BMB of 59 MM patients. The conventional differential count was determined in BMA to estimate the percentage and cytologic grade of plasma cells. The pattern of neoplastic infiltration and percentage of plasma cells were estimated on CD138 immunostained BMB slides microscopically and by computer-assisted image analysis (CIA).

Results
Significantly higher values of plasma cell infiltrates were observed in pathologist (47.7 ± 24.8) and CIA (44.1 ± 30.6) reports in comparison with cytologist analysis (30.6 ± 17.1; P < 0.001 and P < 0.0048, respectively). BMB assessment by pathologist counting and using CIA showed strongest correlation (r = 0.8; P < 0.0001). Correlation was also observed between the pathologist and cytologist counts (r = 0.321; P = 0.015) as well as comparing the percentage of plasma cells in BMA and CIA (r = 0.27; P = 0.05). Patients with clinical stage I/II had a significantly lower CIA plasma cell count than those with clinical stage III (P = 0.008). Overall survival was shorter in patients with more than 25% of atypical plasma cell morphology estimated in BMA (P = 0.05) and a higher percentage of tumor cell infiltrates estimated by the pathologist and CIA (P = 0.0341 and P = 0.013, respectively).

Conclusion
Study results suggested the combined analyses to be useful as a routine procedure to achieve more accurate and informative diagnostic data.
Rab-mediated vesicular transport is required for neuronal positioning in the developing Drosophila visual system
Authors: Houalla Tarek , Shi Lei , van Meyel Donald J , Rao Yong 
Published: June 2010

Abstract

Background
The establishment of tissue architecture in the nervous system requires the proper migration and positioning of newly born neurons during embryonic development. Defects in nuclear translocation, a key process in neuronal positioning, are associated with brain diseases such as lissencephaly in humans. Accumulated evidence suggests that the molecular mechanisms controlling neuronal movement are conserved throughout evolution. While the initial events of neuronal migration have been extensively studied, less is known about the molecular details underlying the establishment of neuronal architecture after initial migration.

Results
In a search for novel players in the control of photoreceptor (R cell) positioning in the developing fly visual system, we found that misexpression of the RabGAP RN-Tre disrupted the apical localization of R-cell nuclei. RN-Tre interacts with Rab5 and Rab11 in the fly eye. Genetic analysis shows that Rab5, Shi and Rab11 are required for maintaining apical localization of R-cell nuclei.

Conclusions
We propose that Rab5, Shi and Rab11 function together in a vesicular transport pathway for regulating R-cell positioning in the developing eye.
Immune disease expressed in liver and platelets in an adolescent: a case report
Authors: Antunes Henedina , Rocha Ruben , Silva Nicole , Pontes Teresa , Antunes Ana , Martins Sofia 
Published: June 2010

Abstract
We report a case of a 15-year-old boy with autoimmune hepatitis lacking common serologic markers and normal gammaglobulinemia associated with immune thrombocytopenia and family history of psoriasis. He presented to our department with a 4-year history of a cervical posterior lymphadenopathy and recent petechiae. Previous laboratory results 6 months before already showed hepatocellular injury. After exclusion of other causes, the diagnosis of autoimmune hepatitis was made based on clinical grounds, associated immune disorder and histological features of liver biopsy.
The authors alert for this atypical presentation of autoimmune hepatitis and associated immune thrombocytopenia.
CD4+ lymphocyte adenosine triphosphate determination in sepsis: a cohort study
Authors: Lawrence Kevin L , White Patrick H , Morris Gerald P , Jennemann Jody , Phelan Donna L , Hotchkiss Richard S , Kollef Marin H 
Published: June 2010

Abstract
Introduction
Patients suffering from sepsis are currently classified on a clinical basis (i.e., sepsis, severe sepsis, septic shock); however, this clinical classification may not accurately reflect the overall immune status of an individual patient. Our objective was to describe a cohort of patients with sepsis in terms of their measured immune status.

Methods
Fifty-two patients with sepsis (n = 13), severe sepsis (n = 21), or septic shock (n = 18) were studied. The immune status was determined by measuring the CD4+ lymphocyte adenosine triphosphate (ATP) content after mitogen stimulation in whole blood.

Results
The measured CD4+ lymphocyte ATP content at the time of ICU admission did not differ among the various groups defined by the sepsis classification system (sepsis = 454 ± 79 ng/ml; severe sepsis = 359 ± 54 ng/ml; septic shock = 371 ± 53 ng/ml; P = 0.44). Furthermore, survivors of sepsis had a significantly higher CD4+ lymphocyte ATP content at the time of ICU admission than did nonsurvivors of sepsis (431 ± 41 ng/mL vs. 266 ± 53 ng/mL, respectively; P = 0.04).

Conclusions
The sepsis classification system that is currently used is not representative of the individual immune status as determined by measuring the CD4+ lymphocyte ATP content. Moreover, a lower CD4+ ATP content at the time of ICU admission is associated with a worse clinical outcome in those suffering from sepsis.
The mechanical function of linked muscles in the guinea fowl hind limb
Authors: Ellerby David J. , Marsh Richard L. 
Published: June 2010

SUMMARY
Although mechanical linkages between the proximal and distal limb are present in a range of species, their functional significance is unknown. We have investigated the mechanical function of the flexor cruris lateralis pars pelvica (FCLP), flexor cruris lateralis pars accessoria (FCLA) and gastrocnemius intermedia (GI), a system of linked muscles spanning proximal and distal limb segments in the guinea fowl (Numida meleagris) hind limb. The FCLP, which is in the anatomical position of a hamstring muscle, is the primary component of the linkage. It is connected to the distal femur via the FCLA, the tarsometatarsus via the tendon of insertion of the GI and the common Achilles tendon, and the tibiotarsus via a distal tendon of insertion. The FCLP may, therefore, potentially exert moments at the hip, knee and ankle joints depending on the joint angles and the relative states of activation in the three muscles. Evidence presented here suggests that the GI and FCLA act as actively controlled links that alter distal action of the FCLP. The FCLP and GI are coactive in the late swing and early stance phases of the stride, forming a triarticular complex, and likely act together to resist and control ankle flexion immediately after foot-down in addition to providing hip extension and knee flexion moments. The FCLP and FCLA are coactive from mid-through to late stance, acting together as a uniarticular hip extensor. Available evidence suggests that this role of the FCLP and FCLA is of increased importance in inclined running and accelerations. This linkage between a proximal muscle and alternate distal connections allows for functional flexibility, both in terms of the site at which the muscle exerts force and the nature of the muscle's mechanical function. The interactions generated between the proximal and distal limb by linkages of this type suggest that less emphasis should be placed on the distinct functional roles of specific anatomical classes of muscle within proximal and distal limb segments.
Chirping response of weakly electric knife fish (Apteronotus leptorhynchus) to low-frequency electric signals and to heterospecific electric fish
Authors: Dunlap K. D. , DiBenedictis B. T. , Banever S. R. 
Published: June 2010

SUMMARY
Brown ghost knife fish (Apteronotus leptorhynchus) can briefly increase their electric organ discharge (EOD) frequency to produce electrocommunication signals termed chirps. The chirp rate increases when fish are presented with conspecific fish or high-frequency (700–1100 Hz) electric signals that mimic conspecific fish. We examined whether A. leptorhynchus also chirps in response to artificial low-frequency electric signals and to heterospecific electric fish whose EOD contains low-frequency components. Fish chirped at rates above background when presented with low-frequency (10–300 Hz) sine-wave stimuli; at 30 and 150 Hz, the threshold amplitude for response was 1 mV cm–1. Low-frequency (30 Hz) stimuli also potentiated the chirp response to high-frequency (∼900 Hz) stimuli. Fish increased their chirp rate when presented with two heterospecific electric fish, Sternopygus macrurus and Brachyhypopomus gauderio, but did not respond to the presence of the non-electric fish Carassius auratus. Fish chirped to low-frequency (150 Hz) signals that mimic those of S. macrurus and to EOD playbacks of B. gauderio. The response to the B. gauderio playback was reduced when the low-frequency component (&lt;150 Hz) was experimentally filtered out. Thus, A. leptorhynchus appears to chirp specifically to the electric signals of heterospecific electric fish, and the low-frequency components of heterospecific EODs significantly influence chirp rate. These results raise the possibility that chirps function to communicate to conspecifics about the presence of a heterospecific fish or to communicate directly to heterospecific fish.
Motor patterns associated with crawling in a soft-bodied arthropod
Authors: Simon Michael A. , Fusillo Steven J. , Colman Kara , Trimmer Barry A. 
Published: June 2010

SUMMARYSoft-bodied animals lack distinct joints and levers, and so their locomotion is expected to be controlled differently from that of animals with stiff skeletons. Some invertebrates, such as the annelids, use functionally antagonistic muscles (circumferential and longitudinal) acting on constant-volume hydrostatics to produce extension and contraction. These processes form the basis for most theoretical considerations of hydrostatic locomotion in organisms including larval insects. However, caterpillars do not move in this way, and their powerful appendages provide grip independent of their dimensional changes. Here, we show that the anterograde wave of movement seen in the crawling tobacco hornworm, Manduca sexta, is mediated by co-activation of dorsal and ventral muscles within a body segment, rather than by antiphasic activation, as previously believed. Furthermore, two or three abdominal segments are in swing phase simultaneously, and the activities of motor neurons controlling major longitudinal muscles overlap in more than four segments. Recordings of muscle activity during natural crawling show that some are activated during both their shortening and elongation. These results do not support the typical peristaltic model of crawling, but they do support a tension-based model of crawling, in which the substrate is utilized as an anchor to generate propulsion.
Effects of wing deformation on aerodynamic forces in hovering hoverflies
Authors: Du Gang , Sun Mao 
Published: June 2010

SUMMARY
We studied the effects of wing deformation on the aerodynamic forces of wings of hovering hoverflies by solving the Navier–Stokes equations on a dynamically deforming grid, employing the recently measured wing deformation data of hoverflies in free-flight. Three hoverflies were considered. By taking out the camber deformation and the spanwise twist deformation one by one and by comparing the results of the deformable wing with those of the rigid flat-plate wing (the angle of attack of the rigid flat-plate wing was equal to the local angle of attack at the radius of the second moment of wing area of the deformable wing), effects of camber deformation and spanwise twist were identified. The main results are as follows. For the hovering hoverflies considered, the time courses of the lift, drag and aerodynamic power coefficients of the deformable wing are very similar to their counterparts of the rigid flat-plate wing, although lift of the deformable wing is about 10% larger, and its aerodynamic power required about 5% less than that of the rigid flat-plate wing. The difference in lift is mainly caused by the camber deformation, and the difference in power is mainly caused by the spanwise twist. The main reason that the deformation does not have a very large effect on the aerodynamic force is that, during hovering, the wing operates at a very high angle of attack (about 50 deg) and the flow is separated, and separated flow is not very sensitive to wing deformation. Thus, as a first approximation, the deformable wing in hover flight could be modeled by a rigid flat-plate wing with its angle of attack being equal to the local angle of attack at the radius of second moment of wing area of the deformable wing.
Partition of aerobic and anaerobic swimming costs related to gait transitions in a labriform swimmer
Authors: Svendsen Jon C. , Tudorache Christian , Jordan Anders D. , Steffensen John F. , Aarestrup Kim , Domenici Paolo 
Published: June 2010

SUMMARY
Members of the family Embiotocidae exhibit a distinct gait transition from exclusively pectoral fin oscillation to combined pectoral and caudal fin propulsion with increasing swimming speed. The pectoral–caudal gait transition occurs at a threshold speed termed Up–c. The objective of this study was to partition aerobic and anaerobic swimming costs at speeds below and above the Up–c in the striped surfperch Embiotoca lateralis using swimming respirometry and video analysis to test the hypothesis that the gait transition marks the switch from aerobic to anaerobic power output. Exercise oxygen consumption rate was measured at 1.4, 1.9 and 2.3 L s–1. The presence and magnitude of excess post-exercise oxygen consumption (EPOC) were evaluated after each swimming speed. The data demonstrated that 1.4 L s–1 was below the Up–c, whereas 1.9 and 2.3 L s–1 were above the Up–c. These last two swimming speeds included caudal fin propulsion in a mostly steady and unsteady (burst-assisted) mode, respectively. There was no evidence of EPOC after swimming at 1.4 and 1.9 L s–1, indicating that the pectoral–caudal gait transition was not a threshold for anaerobic metabolism. At 2.3 L s–1, E. lateralis switched to an unsteady burst and flap gait. This swimming speed resulted in EPOC, suggesting that anaerobic metabolism constituted 25% of the total costs. Burst activity correlated positively with the magnitude of the EPOC. Collectively, these data indicate that steady axial propulsion does not lead to EPOC whereas transition to burst-assisted swimming above Up–c is associated with anaerobic metabolism in this labriform swimmer.
Neuropeptides in theDrosophilacentral complex in modulation of locomotor behavior
Authors: Kahsai Lily , Martin Jean-René , Winther Åsa M. E. 
Published: June 2010

SUMMARYThe central complex is one of the most prominent neuropils in the insect brain. It has been implicated in the control of locomotor activity and is considered as a pre-motor center. Several neuropeptides are expressed in circuits of the central complex, and thus may be modulators of locomotor behavior. Here we have investigated the roles of two different neuropeptides, Drosophila tachykinin (DTK) and short neuropeptide F (sNPF), in aspects of locomotor behavior. In the Drosophila brain, DTK and sNPF are expressed in interneurons innervating the central complex. We have directed RNA interference (RNAi) towards DTK and sNPF specifically in different central complex neurons. We also expressed a temperature-sensitive dominant negative allele of the fly ortholog of dynamin called shibirets1, essential in membrane vesicle recycling and endocytosis, to disrupt synaptic transmission in central complex neurons. The spontaneous walking activity of the RNAi- or shibirets1-expressing flies was quantified by video tracking. DTK-deficient flies displayed drastically increased center zone avoidance, suggesting that DTK is involved in the regulation of spatial orientation. In addition, DTK deficiency in other central complex neurons resulted in flies with an increased number of activity–rest bouts. Perturbations in the sNPF circuit indicated that this peptide is involved in the fine regulation of locomotor activity levels. Our findings suggest that the contribution of DTK and sNPF to locomotor behavior is circuit dependent and associated with particular neuronal substrates. Thus, peptidergic pathways in the central complex have specific roles in the fine tuning of locomotor activity of adult Drosophila.
Spreadsheet-Based Professional Modelling
Authors: Thiriez Hervé 
Published: June 2010

This paper describes, with reference to several professional models developed by the author, how the use of Excel often allows for a much higher efficiency to cost ratio than more traditional approaches such as specialized packages or the use of development languages. Used efficiently, and with the assistance of add-ins, Excel may help build models which most people are convinced would demand more sophisticated software. Of course, this often implies the use of elaborate techniques which reduce the negative impact of Excel's natural limits in terms of number of columns, calculation time, bugs, and so on. There are many other reasons why Excel models are so interesting for business: the interactivity of these models, their reduced development time and cost, their user-friendliness, the positive user/client attitude (the model is not a black box), and the rich graphic possibilities (when the model does not limit itself to standard Excel graphs).
OR/MS in A New MBA Program
Authors: Ólafsson Snjólfur 
Published: June 2010

The University of Iceland launched a two-year executive MBA program in September 2000. The chairman of the program's three-person board (the author) is a professor of OR and together with the director of the program had primary influence on the planning and development of the program. The paper describes how OR/MS (Operations Research/Management Science) was included in the program. OR was taught to some extent in five courses, in two of eleven compulsory courses and in three of ten elective courses. These courses are described in the paper, which concludes with a discussion.
Implementing Dynamic Programs in Spreadsheets
Authors: Raffensperger John F. , Richard Pascal 
Published: June 2010

This paper has two purposes: to help explain dynamic programs (DP) to students who have no background in procedural languages, and to quantitatively motivate good spreadsheet designs that can be developed and modified easily. Teachers and practitioners could benefit from using spreadsheets to solve the common problems that are suited to DP. We give examples of several important DPs, implemented in different ways with a spreadsheet. We further analyze these DPs for their constructive complexity, which is the number of keystrokes required to write a spreadsheet for a given computational task, as a function of the input data. We show that a given DP can be written in several ways, with varying constructive complexity. The implementation can drastically affect the difficulty of writing and modifying a spreadsheet. The different examples demonstrate the value of good spreadsheet design. Note: Please see supplemental material for the errata to this paper.
Impaired turnover of autophagolysosomes in cathepsin L deficiency
Authors: Dennemärker Julia , Lohmüller Tobias , Müller Sebastian , Aguilar Stephanie Vargas , Tobin Desmond J. , Peters Christoph , Reinheckel Thomas 
Published: June 2010

AbstractSome of the phenotypes of mice deficient for the lysosomal cysteine endopeptidase cathepsin L (Ctsl) are characterized by large dysmorphic vesicles in the cytoplasm. Specifically, the heart (dilative cardiomyopathy), the thyroid (impaired thyroglobulin processing) and keratinocytes (periodic hair loss and epidermal hyperproliferation) are affected. We hypothesized that the formation of aberrant vesicles is owing to defects in macroautophagy. Therefore, primary mouse embryonic fibroblasts (MEF), which were derived fromCtsl-/-animals crossed with mice transgenic for the autophagy marker GFP-LC3, were investigated.Ctsl-/-MEF show increased number and size of vesicular structures belonging to the ‘acidic’ cellular compartment and are also characterized by GFP-LC3. Induction of autophagy by nutrient starvation or rapamycin treatment showed no significant impairment of the initiation of autophagy, the formation of autophagosomes or autophagosome-lysosome fusion inCtsl-/-MEF, but co-localization of GFP-LC3 and Lamp1 revealed unusually large autophagolysosomes filled with Lamp1. Furthermore, the soluble lysosomal enzyme cathepsin D was elevated inCtsl-/-MEF. Thus, degradation of autophagolysosomal content is impaired in the absence of Ctsl. This could slow the turnover of autophagolysosomes and result in accumulation of the dysmorphic and ‘acidic’ vesicles that were previously described in the context of the pathological phenotypes ofCtsl-/-mice.
Resveratrol treatment induces redox stress in red blood cells: a possible role of caspase 3 in metabolism and anion transport
Authors: Galtieri Antonio , Tellone Ester , Ficarra Silvana , Russo Annamaria , Bellocco Ersilia , Barreca Davide , Scatena Roberto , Laganà Giuseppina , Leuzzi Ugo , Giardina Bruno 
Published: June 2010

AbstractResveratrol, an important phytoalexine found in many plants, has been shown to be significantly effective in the treatment of several pathological conditions such as cancer, coronary heart disease and osteoarthritis. This study focuses on the effects of this drug on human red blood cells. In particular, we have examined the influence of resveratrol on Band 3, the anion exchanger protein, and hemoglobin as a function of the oxygenation-deoxygenation cycle. Moreover, special attention has been given to the metabolic changes imposed by caspase 3 activation. Resveratrol has proved to lower superoxide production, thereby decreasing heme-iron oxidation and saving the reducing power required for met-hemoglobin reduction. Oxygen binding experiments showed that resveratrol interacts with hemoglobin, shifting the T→R conformational transition towards the higher-affinity R state. This might contribute to altering the metabolic balance of the cell through an intensification of the pentose phosphate pathway. Moreover, at high oxygenation levels of the erythrocytic hemoglobin, resveratrol induces a significant activation of caspase 3, the action of which on Band 3 has a strong impact on cellular metabolism and anion transport.