bluuebunny/crossref_metadata_2025_split huggingface dataset:
Clusters in irregular areas and lattices
Authors: Wieczorek William F. , Delmerico Alan M. , Rogerson Peter A. , Wong David W.S. 
Published: October 2011

AbstractGeographic areas of different sizes and shapes of polygons that represent counts or rate data are often encountered in social, economic, health, and other information. Often political or census boundaries are used to define these areas because the information is available only for those geographies. Therefore, these types of boundaries are frequently used to define neighborhoods in spatial analyses using geographic information systems and related approaches such as multilevel models. When point data can be geocoded, it is possible to examine the impact of polygon shape on spatial statistical properties, such as clustering. We utilized point data (alcohol outlets) to examine the issue of polygon shape and size on visualization and statistical properties. The point data were allocated to regular lattices (hexagons and squares) and census areas for zip‐code tabulation areas and tracts. The number of units in the lattices was set to be similar to the number of tract and zip‐code areas. A spatial clustering statistic and visualization were used to assess the impact of polygon shape for zip‐ and tract‐sized units. Results showed substantial similarities and notable differences across shape and size. The specific circumstances of a spatial analysis that aggregates points to polygons will determine the size and shape of the areal units to be used. The irregular polygons of census units may reflect underlying characteristics that could be missed by large regular lattices. Future research to examine the potential for using a combination of irregular polygons and regular lattices would be useful. WIREs Comp Stat 2012, 4:67–74. doi: 10.1002/wics.196This article is categorized under:

Statistical Learning and Exploratory Methods of the Data Sciences > Clustering and Classification
Statistical Learning and Exploratory Methods of the Data Sciences > Exploratory Data Analysis
Schizophrenia: A five-year follow-up of patient outcome following psycho-education for caregivers
Authors: McWilliams S. , Hill S. , Mannion N. , Fetherston A. , Kinsella A. , O’Callaghan E. 
Published: October 2011

AbstractIntroductionThere is evidence that psycho-education courses for caregivers of individuals with schizophrenia improve the short-term outcome of the condition. However, most of the outcome studies are limited to two-year follow-up.Materials and methodsThis study is a five-year retrospective case-control follow-up of an original cohort of 63 patients and their 101 caregivers who completed a six-week Caregiver Psycho-education Programme (CPP) for schizophrenia and psychosis between 2002 and 2005, and 60 controls, matched for age, gender and severity of their psychotic illness.ResultsPatients whose caregivers learned more from the six-week psycho-education course had a significantly longer time to relapse (P = 0.04) and a significantly shorter length of stay during their first relapse (P < 0.05). Patients whose caregivers attended the six-week psycho-education course (regardless of how much the caregivers learned) had a significantly better outcome than controls. This included a significantly smaller number of relapses (P < 0.01), longer time to relapse (P < 0.01), shorter length of stay during their first relapse (P < 0.01) and smaller number of bed days over five years (P < 0.01). The odds ratio of controls relapsing, although insignificant at one year, was 4.13 (1.85–9.21) at five years. Outcome was not affected by either the numbers of caregivers attending for each patient, or caregiver gender.Discussion and conclusionsThis study, which is among the first to examine outcome over five years, supports the efficacy of psycho-education for caregivers in improving outcome for patients. Caregivers should be encouraged to take up psycho-education where it is available.
Neurites outgrowth and amino acids levels in goldfish retina under hypo‐osmotic or hyper‐osmotic conditions
Authors: Cubillán Lisbeth , Obregón Francisco , Lima Lucimey 
Published: October 2011

AbstractAmino acids are known to play relevant roles as osmolytes in various tissues, including the retina. Taurine is one of these active molecules. In addition, taurine stimulates outgrowth from the goldfish retina by mechanisms that include extracellular matrix, calcium fluxes and protein phosphorylation. The present report aims to explore the effect of medium osmolarity on goldfish retinal outgrowth and the possible modifications produced by changing eye osmolarity on amino acid levels in the retina. Goldfish retinal explants were obtained 10 days after crush of the optic nerve and cultured under iso‐, hypo‐ or hyper‐osmotic conditions. Hypo‐osmotic medium was prepared by diluting the solutions 10% twice, preserving fetal calf serum concentration. Hyper‐osmotic medium was done by adding 50 or 100 mM urea or mannitol. Evaluation of length and density of neurites was performed 5 days after plating. Outgrowth was reduced in hypo‐ and in hyper‐osmotic conditions. Taurine, 4 mM, increased length and density of neurites in iso‐osmotic, and produced stimulatory effects under both hyper‐osmotic conditions. The in vivo modification of osmolarity by intraocular injection of water or 100 mM urea modified levels of free amino acids in the retina. Taurine and aspartate retinal levels increased in a time‐dependent manner after hypo‐ and hyper‐osmotic solution injections. Serine, threonine, arginine, γ‐aminobutyric acid, alanine and tyrosine were elevated in hyper‐osmotic conditions. Outgrowth in vitro, after in vivo osmolarity changes, was higher in the absence of taurine, but did not increase in the presence of the amino acid. The fact that certain outgrowth took place in these conditions support that the impairment was not due to tissue damage. Rather, the effects might be related to the cascade of kinase events described during osmolarity variations. The time course under these conditions produced adjustments in ganglion cells probably related to taurine transporter, and phosphorylation of specific proteins.
Miscible displacements in Hele-Shaw cells: three-dimensional Navier–Stokes simulations
Authors: Oliveira Rafael M. , Meiburg Eckart 
Published: October 2011

AbstractThree-dimensional Navier–Stokes simulations of viscously unstable, miscible Hele-Shaw displacements are discussed. Quasisteady fingers are observed whose tip velocity increases with the Péclet number and the unfavourable viscosity ratio. These fingers are widest near the tip, and become progressively narrower towards the root. The film of resident fluid left behind on the wall decreases in thickness towards the finger tip. The simulations reveal the detailed mechanism by which the initial spanwise vorticity of the base flow, when perturbed, gives rise to the cross-gap vorticity that drives the fingering instability in the classical Darcy sense. Cross-sections at constant streamwise locations reveal the existence of a streamwise vorticity quadrupole along the length of the finger. This streamwise vorticity convects resident fluid from the wall towards the centre of the gap in the cross-gap symmetry plane of the finger, while it transports injected fluid laterally away from the finger centre within the mid-gap plane. In this way, it results in the emergence of a longitudinal, inner splitting phenomenon some distance behind the tip that has not been reported previously. This inner splitting mechanism, which leaves the tip largely intact, is fundamentally different from the familiar tip-splitting mechanism. Since the inner splitting owes its existence to the presence of streamwise vorticity and cross-gap velocity, it cannot be captured by gap-averaged equations. It is furthermore observed that the role of the Péclet number in miscible displacements differs in some ways from that of the capillary number in immiscible flows. Specifically, larger Péclet numbers result in wider fingers, while immiscible flows display narrower fingers for larger capillary numbers. Furthermore, while higher capillary numbers are known to promote tip-splitting, inner splitting is delayed for larger Péclet numbers.
Correlation of a feline muscle mass score with body composition determined by dual-energy X-ray absorptiometry
Authors: Michel Kathryn E. , Anderson Wendy , Cupp Carolyn , Laflamme Dorothy P. 
Published: October 2011

Body condition scoring (BCS) systems primarily assess body fat. Both overweight and underweight animals may have loss of lean tissue that may not be noted using standard BCS systems. Catabolism of lean tissue can occur rapidly, may account for a disproportionate amount of body mass loss in sick cats and can have deleterious consequences for outcome. Therefore, along with evaluation of body fat, patients should undergo evaluation of muscle mass. The aims of the present study were first to evaluate the repeatability and reproducibility of a 4-point feline muscle mass scoring (MMS) system and second to assess the convergent validity of MMS by dual-energy X-ray absorptiometry (DXA). MMS was as follows: 3, normal muscle mass; 2, slight wasting; 1, moderate wasting; 0, severe wasting. For the first aim, forty-four cats were selected for evaluation based on age and BCS, and for the second aim, thirty-three cats were selected based on age, BCS and MMS. Cats were scored by ten different evaluators on three separate occasions. Body composition was determined by DXA. Inter- and intra-rater agreement were assessed using kappa analysis. Correlation between MMS and BCS, age, percentage lean body mass and lean body mass (LBM) was determined using Spearman's rank-order correlation. The MMS showed moderate inter-rater agreement in cats that scored normal or severely wasted (κ = 0·48–0·53). Intra-rater agreement was substantial (κ = 0·71–0·73). The MMS was significantly correlated with BCS (r0·76,P < 0·0001), age (r− 0·75,P < 0·0001), LBM (g) (r0·62,P < 0·0001) and percentage LBM (r− 0·49,P < 0·0035). Additional investigation is needed to determine whether the MMS can be refined and to assess its clinical applicability.
Increased antioxidant capacity in the plasma of dogs after a single oral dosage of tocotrienols
Authors: Raila Jens , Rohn Sascha , Schweigert Florian J. , Abraham Getu 
Published: October 2011

The intestinal absorption of tocotrienols (TCT) in dogs is, to our knowledge, so far unknown. Adult Beagle dogs (n 8) were administered a single oral dosage of a TCT-rich fraction (TRF; 40 mg/kg body weight) containing 32 % α-TCT, 2 % β-TCT, 27 % γ-TCT, 14 % δ-TCT and 25 % α-tocopherol (α-TCP). Blood was sampled at baseline (fasted), 1, 2, 3, 4, 5, 6, 8 and 12 h after supplementation. Plasma and chylomicron concentrations of TCT and α-TCP were measured at each time point. Plasma TAG were measured enzymatically, and plasma antioxidant capacity was assessed by the Trolox equivalent antioxidant capacity assay. In fasted dogs, levels of TCT were 0·07 (sd 0·03) μmol/l. Following the administration of the TRF, total plasma TCT peaked at 2 h (7·16 (sd 3·88) μmol/l; P < 0·01) and remained above baseline levels (0·67 (sd 0·44) μmol/l; P < 0·01) at 12 h. The TCT response in chylomicrons paralleled the increase in TCT in plasma with a maximum peak (3·49 (sd 2·06) μmol/l; P < 0·01) at 2 h post-dosage. α-TCP was the major vitamin E detected in plasma and unaffected by TRF supplementation. The Trolox equivalent values increased from 2 h (776 (sd 51·2) μmol/l) to a maximum at 12 h (1130 (sd 7·72) μmol/l; P < 0·01). The results show that TCT are detected in postprandial plasma of dogs. The increase in antioxidant capacity suggests a potential beneficial role of TCT supplementation in the prevention or treatment of several diseases in dogs.
Faecal IgA concentration is influenced by age in dogs
Authors: Zaine Leandro , Ferreira Chayanne , de O. S. Gomes Marcia , Monti Mariana , Tortola Leticia , Vasconcellos Ricardo S. , Carciofi Aulus C. 
Published: October 2011

Data comparing age-related alterations in faecal IgA concentrations of dogs are not available in the literature. The present study aimed to compare the faecal concentrations of IgA in puppies, mature and senior dogs. A total of twenty-four beagle dogs were used, including eight puppies (5 months old, four females and four males), eight mature (4·6 years old, eight males) and eight senior dogs (10·6 years old, three males and five females). Fresh faecal samples were collected from each dog for three consecutive days and pooled by animal. After saline extraction, IgA content was measured by ELISA. Data were analysed by one-way ANOVA, and means were compared with Tukey's test (P < 0·05). Results showed that puppies have lower faecal IgA concentrations than mature dogs (P < 0·05); senior animals presented intermediary results. The reduced faecal IgA concentration in puppies is consistent with the reduced serum and salivary IgA concentrations reported previously, suggesting a reduced mucosal immunity in this age group. Although some studies have found an increased serum IgA concentration in older dogs, this may differ from the intestinal secretion of IgA, which appears to be lower in some senior animals (four of the eight dogs studied).
Five-week dietary exposure to dry diets alters the faecal bacterial populations in the domestic cat (Felis catus)
Authors: Bermingham Emma N. , Kittelmann Sandra , Henderson Gemma , Young Wayne , Roy Nicole C. , Thomas David G. 
Published: October 2011

The effects of wet (canned) or dry (kibbled) diets on faecal bacterial populations in the cat were investigated in eight domestic short-haired cats (four males and four females; averaging 6 years of age and 3·4 kg) in a nested design. The cats were fed ad libitum a commercially available wet diet (moisture 82·0 %, crude protein 51·7 %, fat 28·9 %, carbohydrate (CHO) 8·9 % and ash 10·6 % DM) for 5 weeks. On the fifth week, individual feed intakes and faecal outputs were determined. Fresh faecal samples were collected twice daily, mixed for homogeneity, subsampled and stored at − 85°C until analysis. The cats were then switched to a commercially available dry diet (moisture 8·5 %, crude protein 33·0 %, fat 11·0 %, CHO 49·4 % and ash 6·6 % DM) for 5 weeks, and fresh faeces were sampled as described previously. Energy intake tended to be higher in cats fed dry diets (P < 0·10), but body weight was similar between the two feeding periods (P>0·05). Denaturing gradient gel electrophoresis (DGGE) of bacterial 16S rRNA genes amplified from DNA extracted from faeces was performed. The unweighted pair group method with arithmetic mean cluster analysis of bacterial community profiles using Pearson's correlation revealed diet-specific clustering when the same cats were fed on either a dry or a wet diet (dissimilarity between the groups, 88·6 %; P < 0·001). Subsequent cloning and sequencing of five selected distinct DGGE bands indicated that members of the Pelomonas and Fusobacteriaceae were influenced by a short-term change in diet format. This suggests that 5-week dietary exposure is sufficient to alter gastrointestinal microflora.
Do feeding practices of obese dogs, before weight loss, affect the success of weight management?
Authors: German Alexander J. , Holden Shelley L. , Gernon Lucy J. , Morris Penelope J. , Biourge Vincent 
Published: October 2011

Dietary factors (e.g. feeding treats and table scraps) can predispose to obesity in dogs, but it is not known whether they also influence success of weight loss. Therefore, the aim of the present study was to determine which pre-weight-loss factors were associated with outcome of their weight management regimen in dogs. Information from ninety-five dogs attending the Royal Canin Weight Management Clinic, University of Liverpool (Wirral, UK), was reviewed. The effect of different food types (e.g. dry, wet and home-prepared), feeding practices (e.g. method of portion size calculation and number of meals per day) and use of treats was assessed on outcome measures of the weight management regimen. Before weight loss, most owners (sixty-three out of ninety-five, 66 %) fed twice daily, used complete dry food (seventy-two out of ninety-five, 76 %) and calculated portion size either by measuring cup (thirty-six out of ninety-five, 38 %) or by visual estimation (thirty-seven out of ninety-five, 39 %). Feeding treats was common and included purchased treats (forty-one out of ninety-five, 43 %), table scraps (twenty-four out of ninety-five, 25 %), pet food (eighty-three out of ninety-five, 87 %) and human food (eighty-one out of ninety-five, 85 %). The majority of feeding practices did not influence any outcome measure for the weight-loss period (P>0·05 for all). However, metabolisable energy intake during weight loss was significantly higher in dogs fed dry food (P = 0·047) and lower in dogs fed purchased snacks before weight loss (P = 0·036). Thus, most pre-weight-loss factors have limited effect on outcomes of weight loss. The significance of the associations identified between feeding of dried food and purchased treats, and weight-loss energy intake, requires further study.
Water content of faeces is higher in the afternoon than in the morning in morning-fed dogs fed diets containing texturised vegetable protein from soya
Authors: Hill Richard C. , Burrows Colin F. , Ellison Gary W. , Finke Mark D. , Huntington Jennifer L. , Bauer John E. 
Published: October 2011

Faecal moisture content can determine whether faeces appear soft or firm, and faecal character can influence whether owners are satisfied with a dog food. In a previous study, dogs appeared to produce softer faeces after noon. The purpose of the present study was to determine whether time of defecation affected canine faecal water content. A total of eight hound dogs were fed one of four canned diets as a single meal each morning for 1 week per diet in a Latin square design. All four diets contained approximately 77 % moisture and, on a DM basis, 24 MJ/kg gross energy, 23 % crude protein, 32 % crude fat, 31 % N-free extract and 1 % crude fibre. The proportion of dietary protein from soya-derived texturised vegetable protein (TVP):beef was 0:100, 14:86, 29:71 and 57:43, respectively. Soya carbohydrate partially replaced maize starch as TVP increased. Faeces were collected by direct catch during the sixth morning and afternoon of each diet period. Mean faecal moisture content was greater in the afternoon than in the morning (79 v. 71 %; P = 0·01) and increased with dietary TVP (P ≤ 0·0001), and there was an interaction between time of day and percentage TVP (P = 0·003). Faecal moisture content differed from morning to afternoon only with TVP in the diet. Faecal wet weight was similar from morning to afternoon. This suggests that time of day and presence of TVP from soya should be taken into account when evaluating the effect of a diet on faecal form and moisture content in dogs fed once daily.
Management of struvite uroliths in dogs
Authors: Calabrò Serena , Tudisco Raffaella , Bianchi Sergio , Grossi Micaela , De Bonis Antonio , Isabella Cutrignelli Monica 
Published: October 2011

Urolithiasis is a common clinical problem in dogs. Struvite and calcium oxalate are the predominant mineral types in dog urolithiasis. The aim of the present study was to compare the effect of two commercial dry foods formulated for the management of struvite urolithiasis with different anion–cation balance on urinary pH. For the trial, twelve privately owned adult dogs showing struvite urolithiasis were studied. The dogs were randomly divided into two groups (A and B) and fed two dissolving diets for 3 months. The analyses of urine were repeated six times. In both diets, the anion–cation balance was negative ( − 203 and − 192 for diets A and B, respectively). At the first urine analysis, pH values of all the dogs were close to 8·0, and bacteria were present in about 70 % of the samples and thus an antimicrobial was administered for 1 week. Both groups showed a progressive decrease in pH values, and after 2 months, in both cases, the recommended pH values for stone dissolution were achieved. From the sampling at 30 d, group A showed pH values significantly (P < 0·05) lower than group B, probably due to the lower anion–cation balance of diet A. The combination of antimicrobial and dietary therapy allowed the dissolution of struvite uroliths in both groups, even if the utilisation of the diet characterised by the lower anion–cation balance seems to decrease the urinary pH more rapidly. In this case, it seems necessary to interrupt the dietary treatment in order to avoid the risk of other diseases.
A pilot study of the body weight of pure-bred client-owned adult cats
Authors: Kienzle Ellen , Moik Katja 
Published: October 2011

A total of 539 pure-bred and seventy-five cats without a pedigree were weighed and scored at cat shows or in veterinary surgeries. Data from normal-weight cats with a body condition score (BCS) of 5 (ideal) were only used. Breeds were grouped into five classes. For female cats, the mean weight for these groups were as follows: very light (2·8 kg); light (3·2 kg); medium (3·5 kg); large (4·0 kg); giant (4·9) kg. For male cats, the corresponding values were 3·6, 4·2, 4·3, 5·1 and 6·1 kg. Siamese/Oriental Shorthair were identified as a very light breed, the Norwegian Forest and the Siberian Cat as a large breed and the Maine Coon as a giant breed. Males and females of the same breed did not always belong to the same class. In some breeds, individuals of the same sex were found in two different classes. The percentage of intact overweight cats (BCS >5) was low (7 % of intact males, 3 % of intact females). Incidence of overweight in neutered cats was 50 % in males and 38 % in females. Among pedigreed cats, there were differences in the incidence of overweight in neutered cats: high in Norwegian Forest Cats (males 75 %, females 50 %) and low in Siamese/Oriental Shorthair Cats (males 25 %, females 1 %). Cats with a BCS of 6, 7 and 8 had on average 120, 154 and 214 % of the normal weight of their breed, respectively.
Physical activity level of adult cats with varied feeding frequency
Authors: Deng Ping , Grant Ryan W. , Swanson Kelly S. 
Published: October 2011

The prevalence of feline obesity is influenced by numerous factors, including inactivity and overconsumption of food. The objective of the present study was to evaluate the effect of feeding frequency on physical activity in adult cats. A total of twelve healthy adult cats were used in a cross-over study consisting of 32 d. In each of the two periods, six cats were fed either two meals or four meals daily. Throughout the study, cats were fed the same diet at amounts to maintain body weight and body condition score. Cats were individually housed 4 h/d at each scheduled feeding time, while for the other 20 h, cats were group-housed to allow for voluntary physical activity in the room with a 16 h light–8 h dark cycle. Voluntary activity levels were evaluated using Actical activity collars for seven consecutive days in each period. Daily average activity level for two-meal-fed cats (20·04 (sem 2·19), activity counts/epoch (15 s)) was not different from four-meal-fed cats (20·14 (sem 2·15), activity counts/epoch (15 s); P>0·05). In conclusion, when group-housed cats are fed to maintain their body weight and body condition score, varied feeding frequency between twice and four times daily may not affect activity levels.