bluuebunny/crossref_metadata_2025_split huggingface dataset:
Effects of eccentric treadmill exercise on inflammatory gene expression in human skeletal muscle
Authors: Buford Thomas W. , Cooke Matthew B. , Shelmadine Brian D. , Hudson Geoffrey M. , Redd Liz , Willoughby Darryn S. 
Published: September 2009

The present study examined the skeletal muscle expression of several genes related to the inflammatory process before and after a bout of downhill running. Twenty-nine males between the ages of 18 and 35 years performed a 45-min downhill (–17.5%) treadmill protocol at 60% of maximal oxygen consumption. Venous bloods samples and muscle biopsy samples from the vastus lateralis were donated prior to and at 3-h and 24-h postexercise, along with ratings of perceived muscle soreness. Serum creatine kinase (CK) was determined, as was skeletal muscle gene expression of interleukin (IL)-6, IL-8, IL-12 (p35), tumor necrosis factor-alpha (TNF-α), IL-1β, cyclooxygenase 2 (COX2), and nuclear factor kappa B (NFkB) (p105/p50). Gene expression was analyzed using RT-PCR and compared with a standard housekeeping gene (β-actin). Data were analyzed for statistical differences using multivariate analysis of variance with univariate follow-up. In addition, Pearson correlations were conducted to determine if any significant relationship exists between any of these transcripts and both CK and muscle soreness. Significant (p < 0.05) up-regulations in IL-6, IL-8, and COX2 mRNA expression were observed compared with baseline, whereas no significant changes for IL-12, IL-1β, TNF-α, or NFkB were noted. Significant increases in IL-6 mRNA were observed at 3 h (p < 0.001) and 24 h (p = 0.043), whereas significant increases in IL-8 (p = 0.001) and COX2 (p = 0.046) mRNA were observed at 3-h postexercise. In addition, muscle soreness was significantly correlated with IL-8 at 24 h (r = –0.370; p = 0.048), whereas CK was significantly related to NFkB at baseline (r = –0.460; p = 0.012). These data indicate that increases in the mRNA expression of IL-6, IL-8, and COX2 occur in the vastus lateralis as a result of damaging eccentric exercise in young, recreationally trained males. Further, it appears that IL-8 transcription may play some role in inhibiting postexercise muscle soreness, possibly through regulation of angiogenesis.
Systemic indices of skeletal muscle damage and recovery of muscle function after exercise: effect of combined carbohydrate–protein ingestion
Authors: Betts James A. , Toone Rebecca J. , Stokes Keith A. , Thompson Dylan 
Published: September 2009

Previous studies indicate that exercise-induced muscle damage may be attenuated when protein is included in a carbohydrate recovery supplement. This study was designed to examine systemic indices of muscle damage, inflammation, and recovery of muscle function, following strenuous exercise, with ingestion of either carbohydrate alone or a carbohydrate–protein mixture. Seventeen highly trained volunteers participated in 2 trials in a randomized order, separated by approximately 9 weeks. Each trial involved 90 min of intermittent shuttle-running, either with ingestion of a 9% sucrose solution during and for 4 h after (1.2 g·kg–1 body mass·h–1) or with the same solution plus 3% whey protein isolate (0.4 g·kg–1 body mass·h–1). Blood was sampled throughout and 24 h after each trial to determinate the systemic indices of muscle damage and inflammation. An isokinetic dynamometer was used to establish reliable baseline measurements of peak isometric torque for knee and hip flexors and extensors, which were then followed-up at 4-, 24-, 48-, and 168-h postexercise. The exercise protocol resulted in significantly elevated variables indicative of muscle damage and inflammation, while peak isometric torque was immediately reduced by 10%–20% relative to baseline, across all muscle groups tested. However, none of these responses varied in magnitude or time-course between the treatments, or between participants’ first and second trials. The addition of whey protein isolate to a dietary carbohydrate supplement ingested during and for 4 h following strenuous exercise did not attenuate systemic indices of muscle damage or inflammation, nor did it restore muscle function more rapidly than when the carbohydrate fraction was ingested alone.
Photocatalytic decolourization of the X3B textile dye in aqueous solutions using iron-rich montmorilloniteA paper submitted to the Journal of Environmental Engineering and Science.
Authors: Wang Zong-ping , Huang Li-zhi , Du Lin , Sheng Hua , Lv Bo 
Published: September 2009

Photocatalytic decolourization of textile dye X3B in aqueous solutions was investigated, using iron-rich montmorillonite (MMt, 2.24%Fe2O3) under a 15 W low-pressure UV lamp (λ = 254 nm, I = 48.4 μW/cm2). Hydroxyl radicals (•OH) were detected by tert-butyl alcohol (TBA) in aqueous MMt suspensions under UV irradiation and were found to be responsible for the degradation of X3B. Free iron ions dissolved in MMt suspensions, structural iron in the MMt solid, and the charged surface of nano clay are responsible for hydroxyl radical (•OH) production. Low pH values are favorable for the decolourization of X3B. The •OH concentration increased with increasing aqueous MMt concentrations in the range of 0 – 2.0 g/L; higher concentrations, for example, 5.0 g/L MMt, inhibited the •OH production. The addition of oxalate was favorable for X3B photodegradation in acid-washed MMt suspensions. This study shows that iron-rich MMt is a potential photocatalyst for the treatment of dye wastewater.
Optimization of growth media for enhanced production of laccase byCryptococcus albidusand its application for bioremediation of chemicals A paper submitted to the Journal of Environmental Engineering and Science.
Authors: Singhal Anjali , Choudhary Gaurav , Thakur Indu Shekhar 
Published: September 2009

Cryptococcus albidus , isolated from the sediments of Century Pulp and Paper Mill, Lalkuan, Nainital, Uttarakhand, India, produced a copper containing oxidase, laccase, that was capable of degrading environmental pollutants. Bagasse was the most efficient inducer for laccase production. The Taguchi approach was used to optimize the growth media for five factors, i.e., pH, copper sulphate, carbon, nitrogen, and the inducer at four levels using an M-16 orthogonal array. The optimum conditions for laccase production were pH (6), CuSO4(2 mmol/L), meat peptone (0.5%), glucose (0.1%), and bagasse (1.0%). After optimization, laccase production increased seven times from 32 to 219 IU/mg. The inducer (bagasse) had maximum effect on laccase production leading to 52% increase, while pH had minimum effect with 7% increase. Growth media with laccase activity (2 U/mL) was applied for the bioremediation of dyes, effluent, and chemical compounds. These experiments showed that the growth media with laccase activity (2 U/mL) produced by Cryptococcus albidus had good potential for bioremediation of toxic and recalcitrant compounds. Further, the laccase enzyme extracted from the growth media was fractionated by DEAE-cellulose ion-exchange chromatography, and the molecular weight of the enzyme determined by sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS–PAGE) was found to be 64 kDa. The activity of laccase was confirmed by native PAGE, in which ABTS was used for staining gel.
Backwater calculations for the St. Lawrence Seaway with the first computer in Canada
Authors: Campbell Scott M. 
Published: September 2009

As the oldest branch of engineering, it is fitting that civil engineering was the first in Canada to make use of modern computing techniques. In the early 1950s, serious planning was underway regarding the St. Lawrence Seaway and Power Project, but before construction could begin, a lengthy series of backwater calculations was required to predict upriver changes to the water profile. It was estimated that these calculations would have taken 20 person-years to complete by hand, but in 1952 and 1953 Ontario Hydro was able to make use of the first electronic computer in Canada – the Ferut at the University of Toronto – to complete in about eight months. These were the first major calculations carried out on any electronic computer in Canada, and helped prove that an all-Canadian navigation route was possible.
Optimization of phosphorus removal in secondary effluent using immersed ultrafiltration membranes with in-line coagulant pretreatment — implications for advanced water treatment and reuse applicationsA paper submitted to the Journal of Environmental Engineering and Science.
Authors: Citulski Joel , Farahbakhsh Khosrow , Kent Fraser 
Published: September 2009

In-line addition of alum and ferric chloride was conducted at a hollow-fibre immersed ultrafiltration (UF) membrane pilot plant, using secondary effluent from a municipal wastewater treatment plant (WWTP) as the feed. The objective of such pretreatment was to remove phosphorus from the feed from an initial concentration of approximately 5 mg/L to below 0.3 mg/L. The simplified in-line coagulant addition process involved hydraulic mixing of the coagulant into the feed and subsequent flocculation, and a greatly reduced (12–14 min) flocculation time relative to conventional coagulation-flocculation-settling treatment. Both alum and ferric chloride effectively removed phosphorus to below the 0.3 mg/L threshold when applied as a pretreatment at optimized doses, both of which were below the WWTP’s current coagulant dose (as ferrous chloride). This simplified pre-treatment scheme provided consistent enhanced removal of phosphorus and organic compounds. These results suggest that simplified in-line coagulant addition in advance of immersed UF membranes enhances the ability to produce treated effluent suitable for water-reuse applications.
Contribution of bone marrow mesenchymal stem cells to porcine hepatocyte culture in vitro
Authors: Gu Jinyang , Shi Xiaolei , Chu Xuehui , Zhang Yue , Ding Yitao 
Published: September 2009

One of the greatest challenges in the attempt to create functional bioartificial liver designs is the maintenance of porcine hepatocyte differentiated functions in vitro. Co-cultivation of hepatocytes with nonparenchymal cells may be beneficial for optimizing cell functions via mimicry of physiological microenvironment. However, the underlying mechanisms remain to be elucidated. An equal number of freshly isolated porcine hepatocytes and purified bone marrow mesenchymal stem cells (MSCS) was randomly co-cultured and the morphological and functional changes of heterotypic interactions were characterized. Furthermore, contributions of soluble factors involved in the separated co-culture system were evaluated. The purity of the third-passage MSCS and primary hepatocytes was more than 90% and 99%, respectively. Hepatocyte viability was greater than 95%. A rapid attachment and self-organization of three-dimensional hepatocyte spheroids were encouraged, which was due to the supporting MSCS of high motility. The elevated induction of both albumin production and urea synthesis was achieved in co-culture (P < 0.05). Data from semipermeable membrane cultures suggested that interleukin-6 is one of the key stimulators in hepatic functional enhancement. These results demonstrate for the first time that soluble factors have beneficial effects on the preservation of hepatic morphology and functionality in the co-culture of hepatocytes with MSCS in vitro, which could represent a promising tool for tissue engineering, cell biology, and bioartificial liver devices.
Cadmium attenuates bradykinin-driven nitric oxide production by interplaying with the localization pattern of endothelial nitric oxide synthase
Authors: Majumder Syamantak , Gupta Ravi , Reddy Himabindu , Sinha Swaraj , Muley Ajit , Kolluru Gopi Krishna , Chatterjee Suvro 
Published: September 2009

Cadmium, a ubiquitous heavy metal, interferes with endothelial functions and angiogenesis. Bradykinin is a Ca-mobilizing soluble peptide that acts via nitric oxide to promote vasodilation and capillary permeability. The objective of the present study was to explore the Cd implications in bradykinin-dependent endothelial functions. An egg yolk angiogenesis model was employed to evaluate the effect of Cd on bradykinin-induced angiogenesis. The results demonstrate that 100 nmol/L Cd attenuated bradykinin-dependent angiogenesis. The results of the in vitro wound healing and tube formation assays by using EAhy 926, a transformed endothelial cell line, suggest that Cd blocked bradykinin-mediated endothelial migration and tube formation by 38% and 67%, respectively, while nitric oxide supplementation could reverse the effect of Cd on bradykinin-induced endothelial migration by 94%. The detection of nitric oxide by using a DAF-2DA fluorescent probe, Griess assay, and ultrasensitive electrode suggests that Cd blocked bradykinin-induced nitric oxide production. Fluorescence imaging of eNOS-GFP transfected endothelial cells, immunofluroscence, and Western blot studies of Cd and bradykinin-treated cells show that Cd interfered with the localization pattern of eNOS, which possibly attenuates nitric oxide production in part. Additionally, Ca imaging of Cd- and bradykinin-treated cells suggests that Cd blocked bradykinin-dependent Ca influx into the cells, thus partially blocking Ca-dependent nitric oxide production in endothelial cells. The results of this study conclude that Cd blunted the effect of bradykinin by interfering with the Ca-associated NOS activity specifically by impeding subcellular trafficking of eNOS.
Bifidobacterial survival in surface water and implications for microbial source tracking
Authors: Ottoson Jakob R. 
Published: September 2009

Bifidobacteria are common in the intestines of humans and other animals. Sorbitol-fermenting Bifidobacteria (SFB) are associated with human faecal pollution. The ratio of total Bifidobacteria (TB) to SFB has been proposed to be a means for determining the source (human or animal) of faecal pollution. In this study, SFB were detected in all sewage samples (n = 39) and in 42% of samples of animal origin (n = 24): pig (5/6 positive), poultry (4/8), horse (1/4), and cow (0/6). The TB:SFB ratio was significantly higher in animal samples than in sewage samples (p < 0.01), with the exception of stored poultry manure, which had ratios (1.4–11) similar to the sewage samples (1–17). The lowest ratio in the other animal samples was 40 (pig). The TB:SFB ratio in sewage remained stable over time in surface water, and it may be a useful screening tool to determine the source of faecal pollution in surface water. Bifidobacteria died off in a log linear manner at 4 and 22 °C, with rates of disappearance of 0.16 and 0.58 log(days–1), respectively. Faecal coliforms (FC) disappeared more slowly (0.09 and 0.43 log(days–1), respectively). The FC:SFB ratio proved to be an inadequate tool for determining the age of sewage pollution.
Global responses ofEscherichia colito adverse conditions determined by microarrays and FT-IR spectroscopy
Authors: Moen Birgitte , Janbu Astrid Oust , Langsrud Solveig , Langsrud Øyvind , Hobman Jon L. , Constantinidou Chrystala , Kohler Achim , Rudi Knut 
Published: September 2009

The global gene expression and biomolecular composition in an Escherichia coli model strain exposed to 10 adverse conditions (sodium chloride, ethanol, glycerol, hydrochloric and acetic acid, sodium hydroxide, heat (46 °C), and cold (15 °C), as well as ethidium bromide and the disinfectant benzalkonium chloride) were determined using DNA microarrays and Fourier transform infrared (FT-IR) spectroscopy. In total, approximately 40% of all investigated genes (1682/4279 genes) significantly changed expression, compared with a nonstressed control. There were, however, only 3 genes (ygaW (unknown function), rmf (encoding a ribosomal modification factor), and ghrA (encoding a glyoxylate/hydroxypyruvate reductase)) that significantly changed expression under all conditions (not including benzalkonium chloride). The FT-IR analysis showed an increase in unsaturated fatty acids during ethanol and cold exposure, and a decrease during acid and heat exposure. Cold conditions induced changes in the carbohydrate composition of the cell, possibly related to the upregulation of outer membrane genes (glgAP and rcsA). Although some covariance was observed between the 2 data sets, principle component analysis and regression analyses revealed that the gene expression and the biomolecular responses are not well correlated in stressed populations of E. coli, underlining the importance of multiple strategies to begin to understand the effect on the whole cell.
Differential response ofPichia guilliermondiispoilage isolates to biological and physico-chemical factors prevailing in Patagonian wine fermentations
Authors: Lopes Christian A. , Sáez Julieta S. , Sangorrín Marcela P. 
Published: September 2009

Pichia guilliermondii can produce volatile phenols in the initial stages of wine fermentation; however, its response to different wine stress conditions has been poorly studied. In this work, we present an analysis of the response of 23 P. guilliermondii indigenous isolates to physical and chemical wine stress factors and to indigenous wine killer yeasts. Principal coordinates analysis (PCoA), based on data obtained from response patterns, was carried out to evaluate the relationships among the isolates. Major differences among the isolates were detected in media plates containing 8% ethanol and in those containing 280 g/L glucose. PCoA identified 3 clusters of isolates with different stress response patterns, indicating a relationship between the tolerance to these compounds and the origin of the isolates. Pichia guilliermondii isolates were sensitive to the toxins produced by the species Hanseniaspora uvarum , Metschnikowia pulcherrima , Wickerhamomyces anomala (ex Pichia anomala ), and Pichia kluyveri , with a maximum level of sensitivity against W. anomala (91% on average). Those isolates obtained from fermenting must proved to be more resistant to killer yeasts than those obtained from grape surfaces. The combined evaluation of the response to physico-chemical and biological factors presented in this work could be a useful standard protocol for the evaluation of the potential spoilage capacity of yeasts in winemaking.
Lactobacillus casei: influence on the innate immune response and haemostatic alterations in a liver-injury model
Authors: Haro Cecilia , Zelaya Hortensia , Lazarte Sandra , Alvarez Susana , Agüero Graciela 
Published: September 2009

Lactobacilllus casei CRL 431 has the ability to modulate the local and systemic immune responses, which are significantly involved in liver injury caused by hepatotoxins. This work was conducted to determine whether L. casei has a preventive effect on the hepatic damage undergone during an acute liver injury (ALI). Methods: ALI was induced by an intraperitoneal injection of d-galactosamine (D-Gal). Different groups of mice received 1× 109 L. casei cells/day/mouse for 2 days before D-Gal injection. Blood and liver samples were obtained 0, 6, 12, and 24 h after D-Gal administration. Results: D-Gal induced increases in serum aminotransferases, reduced the number of blood leukocytes, enhanced neutrophil myeloperoxidase activity, increased dead cells, and altered prothrombin time and plasma fibrinogen levels. The preventive treatment with L. casei for 2 days modulated the innate immune response. This effect was shown by the earlier normalization of white blood cell counts, myeloperoxidase activity and aminotransferases levels. However, the haemostatic parameters were only partially recovered. The favourable effects obtained could be due to the capacity of L. casei to moderate the inflammatory response at the site of the injury with less damage to liver tissue.
Oxidative stress response of Mycosphaerella fijiensis, the causal agent of black leaf streak disease in banana plants, to hydrogen peroxide and paraquat
Authors: Beltrán-García Miguel J. , Manzo-Sanchez Gilberto , Guzmán-González Salvador , Arias-Castro Carlos , Rodríguez-Mendiola Martha , Avila-Miranda Martin , Ogura Tetsuya 
Published: September 2009

Mycosphaerella fijiensis causes black leaf streak disease in banana and plantain. This fungus is usually attacked by reactive oxygen species secreted by the plant or during exposure to fungicide, however, little is known about the antioxidant response of the fungus. In this study, mycelia were observed to totally decompose 30 mmol/L of hydrogen peroxide (H2O2) within 120 min, liberating oxygen bubbles, and also to survive in concentrations as high as 100 mmol/L H2O2. The oxidative stress responses to H2O2, paraquat, and hydroquinone were characterized in terms of the activities of catalase and superoxide dismutase (SOD). Two active catalase bands were seen in native PAGE induced by H2O2. Band I had monofunctional activity and band II had bifunctional catalase–peroxidase activity. Two isozymes of SOD, distinguishable by their cyanide sensitivity, were found; CuZnSOD was the main one. The combination of H2O2 and 3-aminotriazole reduced the accumulation of biomass up to 40% compared with exposure to H2O2 alone, suggesting that catalase is important for the rapid decomposition of H2O2 and has a direct bearing on cell viability. The results also suggest that the superoxide anion formed through the redox of paraquat and hydroquinone has a greater effect than H2O2 on the cellular viability of M. fijiensis.
Production and biochemical characterization of a type B ferulic acid esterase from Streptomyces ambofaciens
Authors: Kheder Fadi , Delaunay Stéphane , Abo-Chameh Ghassan , Paris Cédric , Muniglia Lionel , Girardin Michel 
Published: September 2009

For the first time, the presence of a ferulic acid esterase (FAE) was demonstrated in Streptomyces ambofaciens . This extracellular enzyme was produced on a range of lignocellulosic substrates. The maximal level of activity was detected in the presence of either destarched wheat bran or oat spelt xylan as the sole carbon source. We found that 1% (m/v) of destarched wheat bran was the optimal concentration to induce its production. With this inducer, no ferulic acid dimers were released from the cell wall by the produced FAE. Interestingly, rape cattle cake ( Brassica napus ), which does not contain esterified ferulic acid, was also shown to induce the production of the FAE from S. ambofaciens. The FAE was partially purified from the culture supernatant. The purified enzyme was optimally active at pH 7 and 40 °C. The substrate specificity of the FAE from S. ambofaciens was investigated: the highest activity was determined with methyl p-coumarate, methyl ferulate, and methyl cinnamate. Furthermore, the FAE required a certain distance between the benzene ring and the ester bond to be active. According to these biochemical characteristics, the FAE from S. ambofaciens has been classified as a type B FAE.