bluuebunny/crossref_metadata_2025_split huggingface dataset:
A multicenter study of oral lichen planus in Thai patients
Authors: Thongprasom Kobkan , Youngnak‐Piboonratanakit Pornpan , Pongsiriwet Surawut , Laothumthut Titikan , Kanjanabud Patnarin , Rutchakitprakarn Lalita 
Published: July 2010

Abstract Aim:  Oral lichen planus is an oral mucosal disease that affects middle‐aged patients. The characteristics of oral lichen planus in Thai patients from a multicenter were studied.Methods:  Data of 533 patients from the oral medicine clinics at Chulalongkorn and Mahidol (central Thailand), Chiang Mai (northern Thailand), and Khon Kaen (northeastern Thailand) universities during 2002–2007 were analyzed. The diagnosis of patients with oral lichen planus was clinically and/or histopathologically confirmed.Results:  There was a greater number of female patients than males (4:1). There were significant differences in age, sex, and some systemic diseases among the oral lichen planus patients from the three centers. Burning sensation was the most common symptom (72.9%), followed by pain (26.5%), roughness (6.4%), and then no other symptoms (7.9%). The most common site of lesions was found at the buccal mucosa (87.1%). Atrophic oral lichen planus was common in Thai patients. There were significant differences in the types of oral lichen planus, including reticular, atrophic, and ulcerative oral lichen planus among these patients from the three centers (P = 0.000). Nine cases (1.7%) showed dysplasia, but one case (0.2%) developed squamous cell carcinoma.Conclusion:  Patients with oral lichen planus from the central, northern, and northeastern parts of Thailand presented with distinct characteristics. The malignant transformation of oral lichen planus was low in Thai patients.
Bycatches of ecological field studies: bothersome or valuable?
Authors: Buchholz Sascha , Kreuels Martin , Kronshage Andreas , Terlutter Heinrich , Finch Oliver‐D. 
Published: July 2010

Summary1. Ecological field studies dealing with invertebrates are regularly applied, often using various special kinds of traps within a relatively intensive trapping program. During such programs, large amounts of bycatch – animal material not needed for the original scientific aim of the study – are collected.2. We discuss general aspects about the handling of such bycatches. Given that the potential utility of bycatches from trapping programs can be immense, we strongly advocate a more thorough handling of the bycatch material than is currently typically practised.3. Ways for an efficient transfer of bycatches between taxonomic experts have to be established. Problems concerning labelling as well as concerning costs and space for storage have to be solved to facilitate adequate management of the collected material.
Comparing Segmentation by Time and by Motion in Visual Search: An fMRI Investigation
Authors: Dent Kevin , Allen Harriet , Humphreys Glyn W. 
Published: July 2010

Abstract
Brain activity was recorded while participants engaged in a difficult visual search task for a target defined by the spatial configuration of its component elements. The search displays were segmented by time (a preview then a search display), by motion, or were unsegmented. A preparatory network showed activity to the preview display, in the time but not in the motion segmentation condition. A region of the precuneus showed (i) higher activation when displays were segmented by time or by motion, and (ii) correlated activity with larger segmentation benefits behaviorally, regardless of the cue. Additionally, the results revealed that success in temporal segmentation was correlated with reduced activation in early visual areas, including V1. The results depict partially overlapping brain networks for segmentation in search by time and motion, with both cue-independent and cue-specific mechanisms.
Spaced Learning Enhances Subsequent Recognition Memory by Reducing Neural Repetition Suppression
Authors: Xue Gui , Mei Leilei , Chen Chuansheng , Lu Zhong-Lin , Poldrack Russell , Dong Qi 
Published: July 2010

AbstractSpaced learning usually leads to better recognition memory as compared with massed learning, yet the underlying neural mechanisms remain elusive. One open question is whether the spacing effect is achieved by reducing neural repetition suppression. In this fMRI study, participants were scanned while intentionally memorizing 120 novel faces, half under the massed learning condition (i.e., four consecutive repetitions with jittered interstimulus interval) and the other half under the spaced learning condition (i.e., the four repetitions were interleaved). Recognition memory tests afterward revealed a significant spacing effect: Participants recognized more items learned under the spaced learning condition than under the massed learning condition. Successful face memory encoding was associated with stronger activation in the bilateral fusiform gyrus, which showed a significant repetition suppression effect modulated by subsequent memory status and spaced learning. Specifically, remembered faces showed smaller repetition suppression than forgotten faces under both learning conditions, and spaced learning significantly reduced repetition suppression. These results suggest that spaced learning enhances recognition memory by reducing neural repetition suppression.
Decrements in Hippocampal Activity with Item Repetition during Continuous Recognition: An fMRI Study
Authors: Suzuki Maki , Johnson Jeffrey D. , Rugg Michael D. 
Published: July 2010

Abstract
fMRI (1.5 mm isotropic voxels) was employed to investigate the relationship between hippocampal activity and memory strength in a continuous recognition task. While being scanned, subjects were presented with colored photographs that each appeared on four occasions. The requirements were to make one response when an item was presented for the first or the third time and to make a different response when an item appeared for the second or the fourth time. Consistent with prior findings, items presented for the first time elicited greater hippocampal and parahippocampal activity than repeated items. The activity elicited by repeated items declined linearly as a function of number of presentations (“graded” new &gt; old effects). No medial-temporal lobe regions could be identified where activity elicited by repeated items exceeded that for new items or where activity elicited by repeated items increased with number of presentations. These findings are inconsistent with the proposal that retrieval-related hippocampal activity is positively correlated with memory strength. We also identified graded new &gt; old effects in several cortical regions outside the medial-temporal lobe, including the left retrosplenial/posterior cingulate cortex and the right lateral occipito-temporal cortex. By contrast, graded old &gt; new effects were evident in bilateral mid-intraparietal sulcus and precuneus.
Control of Reflexive Saccades following Hemispherectomy
Authors: Reuter-Lorenz Patricia A. , Herter Troy M. , Guitton Daniel 
Published: July 2010

Abstract
Individuals who have undergone hemispherectomy for treatment of intractable epilepsy offer a rare and valuable opportunity to examine the ability of a single cortical hemisphere to control oculomotor performance. We used peripheral auditory events to trigger saccades, thereby circumventing dense postsurgical hemianopia. In an antisaccade task, patients generated numerous unintended short-latency saccades toward contralesional auditory events, indicating pronounced limitations in the ability of a single hemicortex to exert normal inhibitory control over ipsilateral (i.e., contralesional) reflexive saccade generation. Despite reflexive errors, patients retained an ability to generate correct antisaccades in both directions. The prosaccade task revealed numerous contralesional express saccades, a robust contralesional gap effect, but the absence of both effects for ipsilesional saccades. These results indicate limits to the saccadic control capabilities following hemispherectomy: A single hemicortex can mediate antisaccades in both directions, but plasticity does not extend fully to the bilateral inhibition of reflexive saccades. We posit that these effects are due to altered control dynamics that reduce the responsivity of the superior colliculus on the intact side and facilitate the release of an auditory-evoked ocular grasp reflex into the blind hemifield that the intact hemicortex has difficulty suppressing.
Effects of Selective Attention on Syntax Processing in Music and Language
Authors: Maidhof Clemens , Koelsch Stefan 
Published: July 2010

Abstract
The present study investigated the effects of auditory selective attention on the processing of syntactic information in music and speech using event-related potentials. Spoken sentences or musical chord sequences were either presented in isolation, or simultaneously. When presented simultaneously, participants had to focus their attention either on speech, or on music. Final words of sentences and final harmonies of chord sequences were syntactically either correct or incorrect. Irregular chords elicited an early right anterior negativity (ERAN), whose amplitude was decreased when music was simultaneously presented with speech, compared to when only music was presented. However, the amplitude of the ERAN-like waveform elicited when music was ignored did not differ from the conditions in which participants attended the chord sequences. Irregular sentences elicited an early left anterior negativity (ELAN), regardless of whether speech was presented in isolation, was attended, or was to be ignored. These findings suggest that the neural mechanisms underlying the processing of syntactic structure of music and speech operate partially automatically, and, in the case of music, are influenced by different attentional conditions. Moreover, the ERAN was slightly reduced when irregular sentences were presented, but only when music was ignored. Therefore, these findings provide no clear support for an interaction of neural resources for syntactic processing already at these early stages.
Biogeochemistry of the Amazonian Floodplains: Insights from Six End-Member Mixing Models*
Authors: Bustillo Vincent , Victoria Reynaldo Luiz , de Moura Jose Mauro Sousa , de Castro Victoria Daniel , Toledo Andre Marcondes Andrade , Collicchio Erich 
Published: July 2010

Abstract
The influence of Amazonian floodplains on the hydrological, sedimentary, and biogeochemical river budget was investigated along the Vargem Grande–Óbidos reach, by applying six mixing models based on variable regional and/or variable hydrological sources. By comparing the output of many different models designed for different purposes, the nature and the magnitude of processes linking water and biogeochemical budgets of the Amazonian floodplains were clarified. This study reveals that most of the chemical baseline of the Amazon River basin is acquired before the studied 2000-km Amazonian reach. However, the tight connection between the hydrograph stage of the river and the chemical signals provides insightful information on the dynamics of its floodplains. The chemical expression of biotic and abiotic processes occurring in the Amazonian floodplains can be particularly perceived during falling waters. It appears delayed in time compared to the maximum extension of submerged area, because the alternating water circulation polarity (filling versus emptying) between the main channel and the adjacent floodplains determines delayed emptying of floodplains during falling waters. It results also in a longer time of residence in the hydrograph network, which strengthens the rate of transformation of transiting materials and solutes. Biotic and biologically mediated processes tend to accentuate changes in river water chemistry initiated upstream, in each subbasin, along river corridors, indicating that processes operating downstream prolong those from upstream (e.g., floodplains of the large tributaries). Conversely, the flood wave propagation tends to lessen the seasonal variability as a result of the water storage in the floodplains, which admixes waters of distinct origins (in time and space). The morphology of floodplains, determining the deposition and the diagenesis of the sediments as well as the variable extension of submerged areas or the chronology of floodplains storage/emptying, appears to be the main factor controlling the floodplains biogeodynamics. By coupling classical end-member mixing models (providing insight on hydrological source) with a variable regional contribution scheme, relevant information on the biogeochemical budget of the Amazonian floodplains can be achieved.
Observational Characterization of the Downward Atmospheric Longwave Radiation at the Surface in the City of São Paulo
Authors: Barbaro Eduardo , Oliveira Amauri P. , Soares Jacyra , Codato Georgia , Ferreira Maurício J. , Mlakar Primož , Božnar Marija Z. , Escobedo João F. 
Published: July 2010

Abstract
This work describes the seasonal and diurnal variations of downward longwave atmospheric irradiance (LW) at the surface in São Paulo, Brazil, using 5-min-averaged values of LW, air temperature, relative humidity, and solar radiation observed continuously and simultaneously from 1997 to 2006 on a micrometeorological platform, located at the top of a 4-story building. An objective procedure, including 2-step filtering and dome emission effect correction, was used to evaluate the quality of the 9-yr-long LW dataset. The comparison between LW values observed and yielded by the Surface Radiation Budget project shows spatial and temporal agreement, indicating that monthly and annual average values of LW observed in one point of São Paulo can be used as representative of the entire metropolitan region of São Paulo. The maximum monthly averaged value of the LW is observed during summer (389 ± 14 W m−2; January), and the minimum is observed during winter (332 ± 12 W m−2; July). The effective emissivity follows the LW and shows a maximum in summer (0.907 ± 0.032; January) and a minimum in winter (0.818 ± 0.029; June). The mean cloud effect, identified objectively by comparing the monthly averaged values of the LW during clear-sky days and all-sky conditions, intensified the monthly average LW by about 32.0 ± 3.5 W m−2 and the atmospheric effective emissivity by about 0.088 ± 0.024. In August, the driest month of the year in São Paulo, the diurnal evolution of the LW shows a minimum (325 ± 11 W m−2) at 0900 LT and a maximum (345 ± 12 W m−2) at 1800 LT, which lags behind (by 4 h) the maximum diurnal variation of the screen temperature. The diurnal evolution of effective emissivity shows a minimum (0.781 ± 0.027) during daytime and a maximum (0.842 ± 0.030) during nighttime. The diurnal evolution of all-sky condition and clear-sky day differences in the effective emissivity remain relatively constant (7% ± 1%), indicating that clouds do not change the emissivity diurnal pattern. The relationship between effective emissivity and screen air temperature and between effective emissivity and water vapor is complex. During the night, when the planetary boundary layer is shallower, the effective emissivity can be estimated by screen parameters. During the day, the relationship between effective emissivity and screen parameters varies from place to place and depends on the planetary boundary layer process. Because the empirical expressions do not contain enough information about the diurnal variation of the vertical stratification of air temperature and moisture in São Paulo, they are likely to fail in reproducing the diurnal variation of the surface emissivity. The most accurate way to estimate the LW for clear-sky conditions in São Paulo is to use an expression derived from a purely empirical approach.
Identification of Small Ice Cloud Particles Using Passive Radiometric Observations
Authors: Cooper Steven J. , Garrett Timothy J. 
Published: July 2010

Abstract
There is currently significant uncertainty about the extent to which cirrus clouds are composed of “small” ice crystals smaller than about 20-μm effective radius. This is due in part to concerns that in situ measurements from aircraft are plagued by ice particle shattering on instrument inlets, artificially negatively biasing effective radii. Here, space-based measurements are applied to the problem. It is found that a space-based infrared split-window technique is less sensitive but more accurate than a visible-near-infrared technique for confident assessment of whether thin cirrus clouds have small effective radii, independent of a normal range of retrieval assumptions. Because of the sensitivities of the infrared split-window technique, however, this method can only accurately determine the presence of small particles for ice clouds with optical depths between roughly 0.5 and 3.0. Applied to Moderate Resolution Imaging Spectroradiometer (MODIS) data, it is found that a very conservative minimum of 15%–20% of such thin cirrus globally are composed of small ice crystals, but that the actual value could be as high as 40%, and even higher for cold clouds or those in the tropics. Retrievals are found to be in good agreement with airborne probe measurements from the Cirrus Regional Study of Tropical Anvils and Cirrus Layers–Florida-Area Cirrus Experiment (CRYSTAL-FACE) field campaign, implying that, for the cases examined, the impact of inlet shattering on measurements must have been limited.
African Dust over the Northern Tropical Atlantic: 1955–2008
Authors: Evan Amato T. , Mukhopadhyay Sujoy 
Published: July 2010

Abstract
African dust outbreaks are the result of complex interactions between the land, atmosphere, and oceans, and only recently has a large body of work begun to emerge that aims to understand the controls on—and impacts of—African dust. At the same time, long-term records of dust outbreaks are either inferred from visibility data from weather stations or confined to a few in situ observational sites. Satellites provide the best opportunity for studying the large-scale characteristics of dust storms, but reliable records of dust are generally on the scale of a decade or less. Here the authors develop a simple model for using modern and historical data from meteorological satellites, in conjunction with a proxy record for atmospheric dust, to extend satellite-retrieved dust optical depth over the northern tropical Atlantic Ocean from 1955 to 2008. The resultant 54-yr record of dust has a spatial resolution of 1° and a monthly temporal resolution. From analysis of the historical dust data, monthly tropical northern Atlantic dust cover is bimodal, has a strong annual cycle, peaked in the early 1980s, and shows minimums in dustiness during the beginning and end of the record. These dust optical depth estimates are used to calculate radiative forcing and heating rates from the surface through the top of the atmosphere over the last half century. Radiative transfer simulations show a large net negative dust forcing from the surface through the top of the atmosphere, also with a distinct annual cycle, and mean tropical Atlantic monthly values of the surface forcing range from −3 to −9 W m−2. Since the surface forcing is roughly a factor of 3 larger in magnitude than the top-of-the-atmosphere forcing, there is also a positive heating rate of the midtroposphere by dust.
Analysis and Reduction of Systematic Errors through a Seamless Approach to Modeling Weather and Climate
Authors: Martin G. M. , Milton S. F. , Senior C. A. , Brooks M. E. , Ineson S. , Reichler T. , Kim J. 
Published: July 2010

Abstract
The reduction of systematic errors is a continuing challenge for model development. Feedbacks and compensating errors in climate models often make finding the source of a systematic error difficult. In this paper, it is shown how model development can benefit from the use of the same model across a range of temporal and spatial scales. Two particular systematic errors are examined: tropical circulation and precipitation distribution, and summer land surface temperature and moisture biases over Northern Hemisphere continental regions. Each of these errors affects the model performance on time scales ranging from a few days to several decades. In both cases, the characteristics of the long-time-scale errors are found to develop during the first few days of simulation, before any large-scale feedbacks have taken place. The ability to compare the model diagnostics from the first few days of a forecast, initialized from a realistic atmospheric state, directly with observations has allowed physical deficiencies in the physical parameterizations to be identified that, when corrected, lead to improvements across the full range of time scales. This study highlights the benefits of a seamless prediction system across a wide range of time scales.
An Extended Solar Cycle 23 with Deep Minimum Transition to Cycle 24: Assessments and Climatic Ramifications
Authors: Agee Ernest M. , Cornett Emily , Gleason Kandace 
Published: July 2010

Abstract
The extended length of solar cycle 23 and the associated deep quiet period (QP) between cycles 23 and 24 have been examined using the international sunspot record from 1755 to 2010. This study has also introduced a QP definition based on a (beginning and ending) mean monthly threshold value of less than 10 for the sunspot number. Features addressed are the length and intensity of cycle 23, the length of the QP and the associated number of spotless days, and the respective relationships between cycle intensity, length, and QP. The length of cycle 23 (153 months) is second only to cycle 4 (164 months), with an average of 132.5 months for the 11-yr cycle. The length of the QP between cycles 23 and 24 ranks eighth, extending from October 2005 through November 2009 (but subject to continued weakness in cycle 24). The number of spotless days achieved within this QP was 751 (and for all days within the transition from cycle 23 to cycle24, a record number of 801 spotless days had been observed through May 2010). Shortcomings of solar-convection-model predictions of sunspot activity and intensity are also noted, including the failure in the initial predictions of cycle-24 onset. The relevance of an extended quiet solar period and the potential reduction of total solar irradiance (TSI) are also discussed, both in the context of climate-model simulations of future climate change as well as with regard to future satellite measurements of TSI.
Hindcasting the January 2009 Arctic Sudden Stratospheric Warming and Its Influence on the Arctic Oscillation with Unified Parameterization of Orographic Drag in NOGAPS. Part I: Extended-Range Stand-Alone Forecast
Authors: Kim Young-Joon , Flatau Maria 
Published: July 2010

Abstract
A very strong Arctic major sudden stratospheric warming (SSW) event occurred in late January 2009. The stratospheric temperature climbed abruptly and the zonal winds reversed direction, completely splitting the polar stratospheric vortex. A hindcast of this event is attempted by using the Navy Operational Global Atmospheric Prediction System (NOGAPS), which includes the full stratosphere with its top at around 65 km. As Part I of this study, extended-range (3 week) forecast experiments are performed using NOGAPS without the aid of data assimilation. A unified parameterization of orographic drag is designed by combining two parameterization schemes; one by Webster et al., and the other by Kim and Arakawa and Kim and Doyle. With the new unified orographic drag scheme implemented, NOGAPS is able to reproduce the salient features of this Arctic SSW event owing to enhanced planetary wave activity induced by more comprehensive subgrid-scale orographic drag processes. The impact of the SSW on the tropospheric circulation is also investigated in view of the Arctic Oscillation (AO) index, which calculated using 1000-hPa geopotential height. The NOGAPS with upgraded orographic drag physics better simulates the trend of the AO index as verified by the Met Office analysis, demonstrating its improved stratosphere–troposphere coupling. It is argued that the new model is more suitable for forecasting SSW events in the future and can serve as a tool for studying various stratospheric phenomena.