bluuebunny/crossref_metadata_2025_split huggingface dataset:
Refractory forsterite in primitive meteorites: Condensates from the solar nebula?
Authors: WEINBRUCH S. , PALME H. , SPETTEL B. 
Published: February 2010

Abstract— All groups of chondritic meteorites contain discrete grains of forsteritic olivine with FeO contents below 1 wt% and high concentrations of refractory elements such as Ca, Al, and Ti. Ten such grains (52 to 754 μg) with minor amounts of adhering matrix were separated from the Allende meteorite. After bulk chemical analysis by instrumental neutron activation analysis (INAA), some samples were analyzed with an electron microprobe and some with an ion microprobe.Matrix that accreted to the forsterite grains has a well‐defined unique composition, different from average Allende matrix in having higher Cr and lower Ni and Co contents, which implies limited mixing of Allende matrix.All samples have approximately chondritic relative abundances of refractory elements Ca, Al, Sc, and rare‐earth elements (REE), although some of these elements, such as Al, do not quantitatively reside in forsterite; whereas others (e.g., Ca) are intrinsic to forsterite. The chondritic refractory element ratios in bulk samples, the generally high abundance level of refractory elements, and the presence of Ca‐Al‐Ti‐rich glass inclusions suggest a genetic relationship of refractory condensates with forsteritic olivine. The Ca‐Al‐Ti‐rich glasses may have acted as nuclei for forsterite condensation.Arguments are presented that exclude an origin of refractory forsterite by crystallization from melts with compositions characteristic of Allende chondrules: (a) All forsterite grains have CaO contents between 0.5 and 0.7 wt% with no apparent zoning, requiring voluminous parental melts with 18 to 20 wt% CaO, far above the average CaO content of Allende chondrules. Similar arguments apply to Al contents. (b) The low FeO content of refractory forsterite of 0.2‐0.4 wt% imposes an upper limit of ∼1 wt% of FeO on the parental melt, too low for ordinary and carbonaceous chondrule melts, (c) The Mn contents of refractory forsterites are between 30 to 40 ppm. This is at least one order of magnitude below the Mn content of chondrule olivines in all classes of meteorites. The observed Mn contents of refractory forsterite are much too low for equilibrium between olivine and melts of chondrule composition, (d) As shown earlier, refractory forsterites have O‐isotopic compositions different from chondrules (Weinbruch et al., 1993a).Refractory olivines in carbonaceous chondrites are found in matrix and in chondrules. The compositional similarity of both types was taken to indicate that all refractory forsterites formed inside chondrules (e.g., Jones, 1992). As refractory forsterite cannot have formed by crystallization from chondrule melts, we conclude that refractory forsterite from chondrules are relic grains that survived chondrule melting and probably formed in the same way as refractory forsterite enclosed in matrix. We favor an origin of refractory forsterite by condensation from an oxidized nebular gas.
Petrogenesis of Allan Hills 84001: Constraints from impact‐melted feldspathic and silica glasses
Authors: GREENWOOD James P. , McSWEEN Harry Y. 
Published: February 2010

Abstract— Compositional and textural relationships of shock‐melted glasses in the Allan Hills (ALH) 84001 meteorite have been examined by optical microscopy, electron microprobe analysis, and compositional mapping. The feldspathic and silica glasses exhibit features which constrain the relative timing of shock events and carbonate deposition in ALH 84001. The feldspathic glasses are stoichiometric and have compositions plausibly described as forming from igneous plagioclase (An27–39Ab58–68Or3–7) or sanidine (Or51Ab46An3), or from a mixture of these phases (mixed‐feldspar glasses). These observations argue against prior interpretations of feldspathic glasses as unflowed maskelynite, hydrothermal precipitates or alteration products, or shock melts that have undergone alkali volatilization. Carbonate was deposited around previously formed mixed‐feldspar glass clasts, suggesting that carbonate deposition occurred after the shock event that formed the granular bands (crushed zones) in this meteorite. SiO2‐rich glasses appear to be silica remobilized during shock, with little addition of other material.A petrogenetic history of ALH 84001 consistent with the observations of feldspathic and silica glasses is (1) igneous crystallization and cumulate formation; (2) a pre‐carbonate shock event that formed the granular bands (crushed zones) and sheared chromites, and melted igneous plagioclase and sanidine to form mixed‐feldspar glasses; (3) carbonate and silica deposition in the granular bands (veining of plagioclase glasses by SiO2 and deposition of carbonate around mixed‐feldspar and plagioclase glass clasts); (4) a post‐carbonate shock event that resulted in invasion of carbonate by feldspathic melts, shock faulting and decarbonation of carbonate, high‐temperature mobilization of silica melts, and minor dissolution of orthopyroxene by silica melts.
The role of Fischer‐Tropsch catalysis in solar nebula chemistry
Authors: KRESS Monika E. , TIELENS Alexander G. G. M. 
Published: February 2010

Abstract— Fischer‐Tropsch catalysis, the iron/nickel catalyzed conversion of CO and H2 to hydrocarbons, would have been the only thermally‐driven pathway available in the solar nebula to convert CO into other forms of carbon. A major issue in meteoritics is to determine the origin of meteoritic organics: are they mainly formed from CO in the solar nebula via a process such as Fischer‐Tropsch, or are they derived from interstellar organics? In order to determine the role that Fischer‐Tropsch catalysis may have played in the organic chemical evolution of the solar nebula, we have developed a kinetic model for this process. Our model results agree well with experimental data from several existing laboratory studies. In contrast, empirical rate equations, which have been derived from experimental rate data for a limited temperature (T) and pressure (P) range, are inconsistent with experimental rate data for higher T and lower P.We have applied our model to pressure and temperature profiles for the solar nebula, during the epoch in which meteorite parent bodies condensed and agglomerated. We find that, under nebular conditions, the conversion rate of CO to CH4 does not simply increase with temperature as the empirically‐derived equations suggest. Instead, our model results show that this process would have been most efficient in a fairly narrow region that coincides with the present position of the asteroid belt. Our results support the hypothesis that Fischer‐Tropsch catalysis may have played a role in solar nebula chemistry by converting CO into less volatile materials that can be much more readily processed in the nebula and in parent bodies.
Noble gases in interplanetary dust particles, II: Excess helium‐3 in cluster particles and modeling constraints on interplanetary dust particle exposures to cosmic‐ray irradiation
Authors: Pepin R. O. , Palma R. L. , Schlutter D. J. 
Published: February 2010

Abstract— Measurements of He isotopes in cluster interplanetary dust particles (IDPs) from stratospheric dust collector L2009 reveal anomalous 3He/4He ratios comparable to those seen earlier, up to ∼40x the solar wind ratio, in particles from the companion collector L2011. These overabundances of 3He in the L2009 samples are masked by much higher 4He contents compared to the L2011 particles, and are visible only in minor gas fractions evolved by stepwise heating at high temperatures.Cosmic‐ray induced spallogenic reactions are efficient producers of 3He. The majority of this paper is devoted to a detailed assessment of the possible role of spallation in generating the 3He excesses in these and other cluster IDPs. A model of collisional erosion and fragmentation during inward transit through the interplanetary dust environment is used to estimate space lifetimes of particles from asteroidal and Edgeworth–Kuiper Belt sources. Results of the modeling indicate that Poynting–Robertson orbital evolution timescales of IDPs small enough to elude destruction on their way to Earth from either location are far shorter than the cosmic‐ray exposure ages required to account for observed 3He overabundances. Grains large enough to have sufficiently long space residence times are fragmented close to their sources.An alternative to long in‐space exposure could be prolonged irradiation of particles buried in parent body regoliths prior to their ejection as IDPs. A qualitative calculation suggests, however, that collisional erosion of asteroidal upper‐regolith materials is likely to occur on timescales shorter than the > 1 Ga burial times needed for accumulation of spallogenic 3He to the levels seen in several cluster particles. In contrast, regoliths on Edgeworth–Kuiper Belt objects may be stable enough to account for the 3He excesses, and delivery of heavily pre‐irradiated IDPs to the inner solar system by short‐period Edgeworth–Kuiper Belt comets remains a possibility. A potential problem is that the expected associated abundances of spallation‐produced 21Ne appear to be absent, although here the present IDP data base is too sparse and for the most part too imprecise to rule out a spallogenic origin. Relatively short periods of pre‐ejection residence in asteroidal regoliths may be responsible for the curiously broad exposure age distributions reported for micrometeorites extracted from Greenland and sea‐floor sediments.
Petrology and geochemistry of Patuxent Range 91501, a clast‐poor impact melt from the L‐chondrite parent body and Lewis Cliff 88663, an L7 chondrite
Authors: MITTLEFEHLDT David W. , LINDSTROM Marilyn M. 
Published: February 2010

Abstract— We have performed petrologic and geochemical studies of Patuxent Range (PAT) 91501 and Lewis Cliff (LEW) 88663. PAT 91501, originally classified as an L7 chondrite, is rather a unique, near total impact melt from the L‐chondrite parent body. Lewis Cliff 88663 was originally classified as an “achondrite (?)”, but we find that it is a very weakly shocked L7 chondrite.PAT 91501 is an unshocked, homogeneous, igneous‐textured ultramafic rock composed of euhedral to subhedral olivine, low‐Ca pyroxene, augite and chrome‐rich spinels with interstitial albitic plagioclase and minor silica‐alumina‐alkali‐rich glass. Only ∼10% relic chondritic material is present. Olivine grains are homogeneous (Fa25.2–26.8). Low‐Ca pyroxene (Wo1.9–7.2En71.9–78.2Fs19.9–20.9) and augite (Wo29.8–39.0En49.2–55.3Fs11.8–14.9) display a strong linear TiO2‐Al2O3 correlation resulting from igneous fractionation. Plagioclase is variable in composition; Or3.0–7.7Ab79.8–84.1An8.2–17.2.‐Chrome‐rich spinels are variable in composition and zoned from Cr‐rich cores to Ti‐Al‐rich rims. Some have evolved compositions with up to 7.9 wt% TiO2. PAT 91501 bulk silicate has an L‐chondrite lithophile element composition except for depletions in Zn and Br. Siderophile and chalcophile elements are highly depleted due to sequestration in centimeter‐size metal‐troilite nodules.The minerals in LEW 88663 are more uniform in composition than those in PAT 91501. Olivine grains have low CaO and Cr2O3 contents similar to those in L5–6 chondrites. Pyroxenes have high TiO2 contents with only a diffuse TiO2‐Al2O3 correlation. Low‐Ca pyroxenes are less calcic (Wo1.6–3.1En76.5–77.0Fs20.4–21.4), while augites (Wo39.5–45.6En46.8–51.1Fs7.6–9.4) and plagioclases (Or2.6–5.7Ab74.1–83.1An11.2–23.3) are more calcic. Spinels are homogeneous and compositionally similar to those in L6 chondrites. LEW 88663 has an L‐chondrite bulk composition for lithophile elements, and only slight depletions in siderophile and chalcophile elements that are plausibly due to weathering and/or sample heterogeneity.
Effects of Psychological Stress and Fluoxetine on Development of Oral Candidiasis in Rats
Authors: Núñez María J. , Novío Silvia , Suárez Juan Antonio , Balboa José , Freire-Garabal Manuel 
Published: February 2010

ABSTRACT

Psychological stress has been found to suppress cell-mediated immune responses that are important for limiting the proliferation of
Candida albicans
. Fluoxetine has been observed to reduce negative consequences of stress on the immune system in experimental and clinical models, but there are no data on its effects on oral candidiasis. We designed experiments to evaluate the effects of fluoxetine on the development of oral candidiasis in Sprague-Dawley rats exposed to a chronic auditory stressor. Animals were submitted to surgical hyposalivation in order to facilitate the establishment and persistence of
C. albicans
infection. Stress application and treatment with drugs (placebo or fluoxetine) were initiated 7 days before
C. albicans
inoculation and lasted until the end of the experiments, on day 15 postinoculation. Establishment of
C. albicans
infection was evaluated on days 2 and 15 after inoculation. Tissue injury was determined by the quantification of the number and type (normal or abnormal) of papillae on the dorsal tongue per microscopic field. A semiquantitative scale was devised to assess the degree of colonization of the epithelium by fungal hyphae. Our results showed that stress exacerbates
C. albicans
infection in the tongues of rats. Significant increases in
Candida
counts, the percentage of the tongue's surface covered with clinical lesions, the percentage of abnormal papillae, and the colonization of the epithelium by hyphae were found in stressed rats compared to the nonstressed ones. Treatment with fluoxetine significantly reversed these adverse effects of stress. Besides the psychopharmacological properties of fluoxetine against stress, it has consequences for
Candida
infection.
Evaluation of an Upgraded Version of the Roche Cobas AmpliPrep/Cobas TaqMan HIV-1 Test for HIV-1 Load Quantification
Authors: Damond F. , Avettand-Fenoel V. , Collin G. , Roquebert B. , Plantier J. C. , Ganon A. , Sizmann D. , Babiel R. , Glaubitz J. , Chaix M. L. , Brun-Vezinet F. , Descamps D. , Rouzioux C. 
Published: February 2010

ABSTRACT
We evaluated the performance of the prototype Cobas AmpliPrep/Cobas TaqMan HIV-1 test, version 2.0, using prospective and archived clinical samples initially underquantitated by the Cobas AmpliPrep/Cobas TaqMan HIV-1 test. The performance of the new test was significantly improved, and the majority of the underquantitation observed with the first-version test was eliminated.
Genetic Makeup of Amantadine-Resistant and Oseltamivir-Resistant Human Influenza A/H1N1 Viruses
Authors: Zaraket Hassan , Saito Reiko , Suzuki Yasushi , Baranovich Tatiana , Dapat Clyde , Caperig-Dapat Isolde , Suzuki Hiroshi 
Published: February 2010

ABSTRACTThe emergence and widespread occurrence of antiviral drug-resistant seasonal human influenza A viruses, especially oseltamivir-resistant A/H1N1 virus, are major concerns. To understand the genetic background of antiviral drug-resistant A/H1N1 viruses, we performed full genome sequencing of prepandemic A/H1N1 strains. Seasonal influenza A/H1N1 viruses, including antiviral-susceptible viruses, amantadine-resistant viruses, and oseltamivir-resistant viruses, obtained from several areas in Japan during the 2007-2008 and 2008-2009 influenza seasons were analyzed. Sequencing of the full genomes of these viruses was performed, and the phylogenetic relationships among the sequences of each individual genome segment were inferred. Reference genome sequences from the Influenza Virus Resource database were included to determine the closest ancestor for each segment. Phylogenetic analysis revealed that the oseltamivir-resistant strain evolved from a reassortant oseltamivir-susceptible strain (clade 2B) which circulated in the 2007-2008 season by acquiring the H275Y resistance-conferring mutation in the NA gene. The oseltamivir-resistant lineage (corresponding to the Northern European resistant lineage) represented 100% of the H1N1 isolates from the 2008-2009 season and further acquired at least one mutation in each of the polymerase basic protein 2 (PB2), polymerase basic protein 1 (PB1), hemagglutinin (HA), and neuraminidase (NA) genes. Therefore, a reassortment event involving two distinct oseltamivir-susceptible lineages, followed by the H275Y substitution in the NA gene and other mutations elsewhere in the genome, contributed to the emergence of the oseltamivir-resistant lineage. In contrast, amantadine-resistant viruses from the 2007-2008 season distinctly clustered in clade 2C and were characterized by extensive amino acid substitutions across their genomes, suggesting that a fitness gap among its genetic components might have driven these mutations to maintain it in the population.
Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array
Authors: Lin Yu Tzu , Vaneechoutte Mario , Huang Ay Huey , Teng Lee Jene , Chen Hung-Mo , Su Shu-Li , Chang Tsung Chain 
Published: February 2010

ABSTRACT

Anaerobic bacteria can cause a wide variety of infections, and some of these infections can be serious. Conventional identification methods based on biochemical tests are often lengthy and can produce inconclusive results. An oligonucleotide array based on the 16S-23S rRNA intergenic spacer (ITS) sequences was developed to identify 28 species of anaerobic bacteria and
Veillonella
. The method consisted of PCR amplification of the ITS regions with universal primers, followed by hybridization of the digoxigenin-labeled PCR products to a panel of 35 oligonucleotide probes (17- to 30-mers) immobilized on a nylon membrane. The performance of the array was determined by testing 310 target strains (strains which we aimed to identify), including 122 reference strains and 188 clinical isolates. In addition, 98 nontarget strains were used for specificity testing. The sensitivity and the specificity of the array for the identification of pure cultures were 99.7 and 97.1%, respectively. The array was further assessed for its ability to detect anaerobic bacteria in 49 clinical specimens. Two species (
Finegoldia magna
and
Bacteroides vulgatus
) were detected in two specimens by the array, and the results were in accordance with those obtained by culture. The whole procedure of array hybridization took about 8 h, starting with the isolated colonies. The array can be used as an accurate alternative to conventional methods for the identification of clinically important anaerobes.
Molecular Characterization of an Adenovirus 3-16 Intertypic Recombinant Isolated in Argentina from an Infant Hospitalized with Acute Respiratory Infection
Authors: Kajon Adriana E. , Dickson Laura M. , Murtagh Patricia , Viale Diana , Carballal Guadalupe , Echavarria Marcela 
Published: February 2010

ABSTRACT
An intertypic recombinant adenovirus with a serotype 3-like hexon gene and a serotype 16-like fiber (99% identical to that of the prototype strain of human adenovirus 16 [HAdV-16], Ch79) was isolated in Argentina from an infant admitted to the hospital with acute respiratory disease. Consistent with the results of molecular characterization, strain Arg827/04 was designated H3-F16.
Distinct p53, p53:LANA, and LANA Complexes in Kaposi's Sarcoma-Associated Herpesvirus Lymphomas
Authors: Chen Wuguo , Hilton Isaac B. , Staudt Michelle R. , Burd Christin E. , Dittmer Dirk P. 
Published: February 2010

ABSTRACT
The role of p53 in primary effusion lymphoma (PEL) is complicated. The latency-associated nuclear antigen (LANA) of Kaposi's sarcoma-associated herpesvirus (KSHV) binds p53. Despite this interaction, we had found that p53 was functional in PEL, i.e., able to induce apoptosis in response to DNA damage (C. E. Petre, S. H. Sin, and D. P. Dittmer, J. Virol. 81:1912-1922, 2007), and that hdm2 was overexpressed. To further elucidate the relationship between LANA, p53, and hdm2, we purified LANA complexes from PEL by column chromatography. This confirmed that LANA bound p53. However, the LANA:p53 complexes were a minority compared to hdm2:p53 and p53:p53 complexes. The half-life of p53 was not extended, which is in contrast to the half-life of simian virus 40 T antigen-transformed cells. p53:p53, LANA:p53, and LANA:LANA complexes coexisted in PEL, and each protein was able to bind to its cognate DNA element. These data suggest that under normal conditions, p53 is inactive in PEL, thus allowing for exponential growth, but that this inactivation is driven by the relative stoichiometries of LANA, hdm2, and p53. If p53 is activated by DNA damage or nutlin-3a, the complex falls apart easily, and p53 exercises its role as guardian of the genome.
Killing of Avian and Swine Influenza Virus by Natural Killer Cells
Authors: Achdout Hagit , Meningher Tal , Hirsh Shira , Glasner Ariella , Bar-On Yotam , Gur Chamutal , Porgador Angel , Mendelson Michal , Mandelboim Michal , Mandelboim Ofer 
Published: February 2010

ABSTRACT

Today, global attention is focused on two influenza virus strains: the current pandemic strain, swine origin influenza virus (H1N1-2009), and the highly pathogenic avian influenza virus, H5N1. At present, the infection caused by the H1N1-2009 is moderate, with mortality rates of less <1%. In contrast, infection with the H5N1 virus resulted in high mortality rates, and ca. 60% of the infected patients succumb to the infection. Thus, one of the world greatest concerns is that the H5N1 virus will evolve to allow an efficient human infection and human-to-human transmission. Natural killer (NK) cells are one of the innate immune components playing an important role in fighting against influenza viruses. One of the major NK activating receptors involved in NK cell cytotoxicity is NKp46. We previously demonstrated that NKp46 recognizes the hemagglutinin proteins of B and A influenza virus strains. Whether NKp46 could also interact with H1N1-2009 virus or with the avian influenza virus is still unknown. We analyzed the immunological properties of both the avian and the H1N1-2009 influenza viruses. We show that NKp46 recognizes the hemagglutinins of H1N1-2009 and H5 and that this recognition leads to virus killing both
in vitro
and
in vivo
. However, importantly, while the swine H1-NKp46 interactions lead to the direct killing of the infected cells, the H5-NKp46 interactions were unable to elicit direct killing, probably because the NKp46 binding sites for these two viruses are different.
Caulimoviridae
Tubule-Guided Transport Is Dictated by Movement Protein Properties
Authors: Sánchez-Navarro Jesús , Fajardo Thor , Zicca Stefania , Pallás Vicente , Stavolone Livia 
Published: February 2010

ABSTRACT

Plant viruses move through plasmodesmata (PD) either as nucleoprotein complexes (NPCs) or as tubule-guided encapsidated particles with the help of movement proteins (MPs). To explore how and why MPs specialize in one mechanism or the other, we tested the exchangeability of MPs encoded by DNA and RNA virus genomes by means of an engineered alfalfa mosaic virus (AMV) system. We show that
Caulimoviridae
(DNA genome virus) MPs are competent for RNA virus particle transport but are unable to mediate NPC movement, and we discuss this restriction in terms of the evolution of DNA virus MPs as a means of mediating DNA viral genome entry into the RNA-trafficking PD pathway.