bluuebunny/crossref_metadata_2025_split huggingface dataset:
Influence of dams on sauger population structure and hybridization with introduced walleye
Authors: Rosenthal William C. , Mandeville Elizabeth G. , Pilkerton Ashleigh M. , Gerrity Paul C. , Skorupski Joseph A. , Walters Annika W. , Wagner Catherine E. 
Published: July 2024

AbstractDams have negatively affected freshwater biodiversity throughout the world. These negative effects tend to be exacerbated for aquatic taxa with migratory life histories, and for taxa whose habitat is fundamentally altered by the formation of large reservoirs. Sauger (Sander candadensis; Percidae), large‐bodied migratory fishes native to North America, have seen population declines over much of the species' range, and dams are often implicated for their role in blocking access to spawning habitat and otherwise negatively affecting river habitat. Furthermore, hybridization appears to be more frequent between sauger and walleye in the reservoirs formed by large dams. In this study, we examine the role of dams in altering sauger population connectivity and facilitating hybridization with introduced walleye in Wyoming's Wind River and Bighorn River systems. We collected genomic data from individuals sampled over a large spatial scale and replicated sampling throughout the spawning season, with the intent to capture potential variation in hybridization prevalence or genomic divergence between sauger with different life histories. The timing of sampling was not related to hybridization prevalence or population divergence, suggesting limited genetic differences between sauger spawning in different time and places. Overall, there was limited hybridization detected, however, hybridization was most prevalent in Boysen Reservoir (a large impounded section of the Wind River). Dams in the lower Wind River and upper Bighorn River were associated with population divergence between sauger upstream and downstream of the dams, and demographic models suggest that this divergence has occurred in concordance with the construction of the dam. Sauger upstream of the dams exhibited substantially lower estimates of genetic diversity, which implies that disrupted connectivity between Wind River and Bighorn River sauger populations may already be causing negative demographic effects. This research points towards the importance of considering the evolutionary consequences of dams on fish populations in addition to the threats they pose to population persistence.
Winter and spring frost events delay leaf‐out, hamper growth and increase mortality in European beech seedlings, with weaker effects of subsequent frosts
Authors: Muffler Lena , Weigel Robert , Beil Ilka , Leuschner Christoph , Schmeddes Jonas , Kreyling Juergen 
Published: July 2024

AbstractThe persistence of plant populations depends crucially on successful regeneration. Yet, little is known about the effects of consecutive winter and spring frost events on the regeneration stage of trees from different seed sources, although this will partly determine the success of climate warming‐driven poleward range shifts. In a common garden experiment with European beech (Fagus sylvatica) seedlings from winter 2015/2016 to autumn 2017, we studied how simulated successive spring and winter frost events affect leaf‐out dates, growth performance, and survival rates of 1‐ to 2‐year‐old seedlings from provenances differing in climate at origin. We further investigated the combined effects of successive frost events. The first spring frost after germination led to a mortality rate up to 75%, resulting in reduced seedling numbers but better frost tolerance of the survivors, as reflected in a weaker impact of the following winter frost event in the survivors compared to the non‐acclimated control. Final plant height was most strongly reduced by the spring frost in the second year. The winter frost event delayed leaf‐out by up to 40 days, leading to severe growth impairment in 2017. Our results indicate partly successful frost acclimation and/or the selection of frost‐hardier individuals, because the negative growth effects of consecutive frost events did not add up after exposure to more than one event. Both mechanisms may help to increase the frost tolerance of beech offspring. Nevertheless, mortality after the first spring frost was high, and frost exposure generally caused growth reductions. Thus, achieving higher frost tolerance may not be sufficient for beech seedlings to overcome frost‐induced reductions in competitive strength caused by winter frost damage and delayed leaf enfolding.
Using motion‐detection cameras to monitor foraging behaviour of individual butterflies
Authors: Dalbosco Dell’Aglio Denise , McMillan Owen W. , Montgomery Stephen 
Published: July 2024

AbstractThe activity of many animals follows recurrent patterns and foraging is one of the most important processes in their daily activity. Determining movement in the search for resources and understanding temporal and spatial patterns in foraging has therefore long been central in behavioural ecology. However, identifying and monitoring animal movements is often challenging. In this study we assess the use of camera traps to track a very specific and small‐scale interactions focused on the foraging behaviour of Heliconiini butterflies. Data on floral visitation was recorded using marked individuals of three pollen‐feeding species of Heliconius (H. erato, H. melpomene and H. sara), and two closely related, non‐pollen feeding species (Dryas iulia and Dryadula phaetusa) in a large outdoor insectary. We demonstrate that camera traps efficiently capture individual flower visitation over multiple times and locations and use our experiments to describe some features of their spatial and temporal foraging patterns. Heliconiini butterflies showed higher activity in the morning with strong temporal niche overlap. Differences in foraging activity between males and females was observed with females foraging earlier than males, mirroring published field studies. Some flowers were more explored than others, which may be explained by butterflies foraging simultaneously affecting each other's flower choices. Feeding was grouped in short periods of intense visits to the same flower, which we refer to as feeding bouts. Heliconius also consistently visits the same flower, while non‐Heliconius visited a greater number of flowers per day and their feeding bouts were shorter compared with Heliconius. This is consistent with Heliconius having more stable long‐term spatial memory and foraging preferences than outgroup genera. More broadly, our study demonstrates that camera traps can provide a powerful tool to gather information about foraging behaviour in small insects such as butterflies. © 2024 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.
DNA barcoding is currently unreliable for species identification in most crayfishes
Authors: Allison Patrick F. , Pickich Emily T. , Barnett Zanethia C. , Garrick Ryan C. 
Published: July 2024

AbstractDNA barcoding is commonly used for species identification. Despite this, there has not been a comprehensive assessment of the utility of DNA barcoding in crayfishes (Decapoda: Astacidea). Here we examined the extent to which local barcoding gaps (used for species identification) and global barcoding gaps (used for species discovery) exist among crayfishes, and whether global gaps met a previously suggested 10× threshold (mean interspecific difference being 10× larger than mean intra specific difference). We examined barcoding gaps using publicly available mitochondrial COI sequence data from the National Center for Biotechnology Information's nucleotide database. We created two versions of the COI datasets used for downstream analyses: one focused on the number of unique haplotypes (NH) per species, and another that focused on total number of sequences (NS; i.e., including redundant haplotypes) per species. A total of 81 species were included, with 58 species and five genera from the family Cambaridae and 23 species from three genera from the family Parastacidae. Local barcoding gaps were present in only 30 species (20 Cambaridae and 10 Parastacidae species). We detected global barcoding gaps in only four genera (Cambarus, Cherax, Euastacus, and Tenuibranchiurus), which were all below (4.2× to 5.2×) the previously suggested 10× threshold. We propose that a ~5× threshold would be a more appropriate working hypothesis for species discovery. While the NH and NS datasets yielded largely similar results, there were some discrepant inferences. To understand why some species lacked a local barcoding gap, we performed species delimitation analyses for each genus using the NH dataset. These results suggest that current taxonomy in crayfishes may be inadequate for the majority of examined species, and that even species with local barcoding gaps present may be in need of taxonomic revisions. Currently, the utility of DNA barcoding for species identification and discovery in crayfish is quite limited, and caution should be exercised when mitochondrial‐based approaches are used in place of taxonomic expertise. Assessment of the evidence for local and global barcoding gaps is important for understanding the reliability of molecular species identification and discovery, but outcomes are dependent on the current state of taxonomy. As this improves (e.g., via resolving species complexes, possibly elevating some subspecies to the species‐level status, and redressing specimen misidentifications in natural history and other collections), so too will the utility of DNA barcoding.
Root pH variation of herbaceous plants among plant functional groups in response to climate and soil gradients on the Tibetan alpine grasslands
Authors: Zhao Lirong , Pang Bo , Hong Jiangtao , Ma Xingxing , Du Ziyin , Wang Xiaodan 
Published: July 2024

AbstractPlant pH is an emerging functional trait that plays important roles in physiological processes and nutrient cycling. However, how root pH varies among plant functional groups (PFGs) and the regulatory factors on a large scale remain unclear. Therefore, we quantified root pH variation of herbaceous plants in four PFGs from 20 sites on the Tibetan Plateau along a 1600 km transect and explored the correlations between root pH and different PFGs, climate and soil conditions. The results showed that the root pH of herbaceous plants was slightly acidic (6.46 ± 0.05). Grasses had the highest root pH (6.91 ± 0.10) across all functional groups (p < .05), whereas legumes had the lowest (5.90 ± 0.08; p < .05). The root pH decreased with mean annual precipitation, aridity index, soil water content and soil stress coefficient, whereas the significant positive correlation with soil pH. PFGs, climate and soil explained 5.39, 11.15 and 24.94% of the root pH variance, respectively. This study provided a comprehensive analysis of root pH patterns in herbaceous plants over a large spatial scale. Root pH was controlled by the combined influence of PFGs, climate and soil properties, with moisture status being the main influential factor. In contrast to the leaf pH, the root pH of herbaceous plants is strongly affected by the soil pH along environmental gradients. Our findings provide new insights into root functional traits and survival strategies of herbaceous plants in alpine ecosystems.
Substrate scent‐induced disproportionate seed dispersal by rodents
Authors: Guo Shuhua , Yi Xianfeng , Sui Meixia 
Published: July 2024

AbstractConspecific adults impose strong negative density‐dependent effects on seed survival nearby parent trees, however, the underlying mechanisms are diversified and remain unclear. In this study, we presented consistent evidence that parent‐scented forest floor masked seed odor, reduced cache recovery rate by scatter‐hoarding animals, and then increased seed dispersal far away from mother trees. Our results showed that seed odors of Korean pine Pinus koraiensis match well with the volatile profile of their forest floor. Moreover, scatter‐hoarding animals selectively transported P. koraiensis seeds toward the areas where seed odor was more contrasting against the background substrate, possibly due to the fact that accumulation of conspecific volatile compounds in caches hindered seed detection by scatter‐hoarding animals. Our study provides insight into the role of leaf litter in directing seed dispersal process, representing a novel mechanism by which P. koraiensis increases selection for seed dispersal far away from the parent tree.
Carbon dynamics in high‐Andean tropical cushion peatlands: A review of geographic patterns and potential drivers
Authors: García Lino Mary Carolina , Pfanzelt Simon , Domic Alejandra I. , Hensen Isabell , Schittek Karsten , Meneses Rosa Isela , Bader Maaike Y. 
Published: July 2024

AbstractPeatlands store large amounts of carbon (C), a function potentially threatened by climate change. Peatlands composed of vascular cushion plants are widespread in the northern and central high Andes (páramo, wet and dry puna), but their C dynamics are hardly known. To understand the interplay of the main drivers of peatland C dynamics and to infer geographic patterns across the Andean regions, we addressed the following question: How do topography, hydrology, temperature, past climate variability, and vegetation influence the C dynamics of these peatlands? We summarize the available information on observed spatial and inferred temporal patterns of cushion peatland development in the tropical and subtropical Andes. Based on this, we recognize the following emerging patterns, which all need testing in further studies addressing spatial and temporal patterns of C accumulation: (1) Peatlands in dry climates and those in larger catchments receive higher sediment inputs than peatlands from wet puna and páramo and in small catchments. This results in peat stratigraphies intercalated with mineral layers and affects C accumulation by triggering vegetation changes. (2) High and constant water tables favor C accumulation. Seasonal water level fluctuations are higher in wet and dry puna, in comparison with páramo, leading to more frequent episodes of C loss in puna. (3) Higher temperatures favor C gain under high and constant water availability but also increase C loss under low and fluctuating water levels. (4) C accumulation has been variable through the Holocene, but several peatlands show a recent increase in C accumulation rates. (5) Vegetation affects C dynamics through species‐specific differences in productivity and decomposition rate. Because of predicted regional differences in global climate change manifestations (seasonality, permafrost behavior, temperature, precipitation regimes), cushion peatlands from the páramo are expected to mostly continue as C sinks for now, whereas those of the dry puna are more likely to turn to C sources as a consequence of increasing aridification.
Environmental DNA reveals fine‐scale spatial and temporal variation of marine mammals and their prey species in a Scottish marine protected area
Authors: Boyse Elizabeth , Robinson Kevin P. , Beger Maria , Carr Ian M. , Taylor Morag , Valsecchi Elena , Goodman Simon J. 
Published: July 2024

AbstractMarine mammal foraging grounds are popular focal points for marine protected area (MPA) implementation, despite being temporally dynamic, requiring continuous monitoring to infer prey availability and abundance. Marine mammal distributions are assumed to be driven by their prey in foraging areas, but limited understanding of prey distributions often prevents us from exploring how shifting prey availability impacts both seasonal and long‐term marine mammal distributions. Environmental DNA (eDNA) metabarcoding could enhance the understanding of marine mammal habitat use in relation to their prey through simultaneous monitoring of both. However, eDNA applications focused on marine mammals or predator–prey dynamics have been limited to date. In this study, we assess spatiotemporal changes in the distribution and abundance of cetaceans, minke whales (Balaenoptera acutorostrata), bottlenose dolphins (Tursiops truncatus) and harbor porpoises (Phocoena phocoena) in relation to key prey species in a newly established MPA, employing eDNA metabarcoding. We recovered 105 molecular operational taxonomic units (OTUs) from marine vertebrates using two primer sets targeting 12S and 16S genes, along with 112 OTUs from a broader eukaryotic primer set targeting 18S rRNA. Overall, key forage fish prey species, sandeels and clupeids, were the most abundant teleost fishes detected, although their availability varied temporally and with distance from shore. We also found clear spatial partitioning between coastal bottlenose dolphins and the more pelagic minke whales and harbor porpoises, paralleling availability of their main prey species. Other species of conservation interest were also detected including the critically endangered European eel (Anguilla anguilla), Atlantic bluefin tuna (Thunnus thynnus), and the invasive pink salmon (Oncorhynchus gorbuscha). This study demonstrates the application of eDNA to detect spatiotemporal trends in the occurrence and abundance of cetacean predators and their prey, furthering our understanding of fine‐scale habitat use within MPAs. Future long‐term monitoring of predator–prey dynamics with eDNA could improve our ability to predict climate‐induced shifts in foraging grounds and enhance rapid responses with appropriate management actions.
Structural difference analysis of gut microbiota in different bone mass populations and relevant probiotic (lactobacilli) supplementation strategies
Authors: Pan Jiani , Yin Pingping , Yu Leilei , Zhang Heng , Zhang Chengcheng , Zhao Jianxin , Tian Fengwei , Zhai Qixiao 
Published: July 2024

AbstractDisruption of the bone metabolic balance with advancing age leads to an escalating prevalence of bone‐related diseases, significantly compromising individuals’ quality of life. The gut microbiota actively participates in the regulation of bone metabolism, and perturbations in the gut microbiota can exacerbate bone diseases by compromising gut barrier integrity. Determining the microbial taxa involved in bone loss could offer valuable insights into the development of alternative therapies and nutritional interventions for disease management. Therefore, based on metagenomic and 16S ribosomal RNA data, this study analyzed the gut microbiota structure of 488 individuals with different bone masses (NC, normal; ON, osteopenia; OP, osteoporosis) to identify significant associations between the gut microbiota and bone loss. The results showed that at the genus and species levels, the microbiota diversity of the ON population increased, whereas that of the OP population decreased. Bacteroides were significantly enriched in the OP population, whereas the beneficial bacteria Bifidobacterium, Akkermansia, and lactobacilli decreased. Subsequent analyses revealed no significant variation in different bone populations in terms of Bifidobacterium levels, whereas lactobacilli exhibited diverse responses across distinct bone populations. The administration of lactobacilli effectively enhanced lumbar spine bone mineral density and modulated the gut microbiota structure in a population with unhealthy bone mass. This study contributes to the validation of the association between the gut microbiota and bone mass, enhances our understanding of the potential impact of probiotics (lactobacilli) on bone mass, and establishes a robust scientific basis for the application of probiotics in the regulation of bone mass.
Comparison of different green extraction methods used for the extraction of anthocyanin from red onion skin
Authors: Mirzazadeh Nasim , Bagheri Hadiseh , Mirzazadeh Mehdi , Soleimanimehr Somaye , Rasi Fatemeh , Akhavan‐Mahdavi Sahar 
Published: July 2024

AbstractGreen extraction primarily emphasizes developing new extraction techniques that consume less energy. It involves using safe, non‐toxic alternative solvents and sustainable natural resources to ensure the production of safe and high‐quality extracts. Red onion skin is an important source of anthocyanins, a subgroup of phenolic compounds. Anthocyanins are an important group of natural pigments that have attracted a lot of attention due to their health benefits. However, the instability and high sensitivity of these pigments have limited their use in food and cosmetics. Therefore, in this study, various modern green extraction methods were used, including solvent extraction, ultrasound‐assisted extraction, subcritical water extraction, microwave‐assisted extraction (MAE), pulsed electric field extraction, supercritical fluid extraction (SFE), and high hydrostatic pressure‐assisted (HHPAE) extraction, to specifically extract and purify anthocyanins. The extraction efficiency, specifically targeting anthocyanins, showed the highest efficiency with HHPAE (81.84%) and the lowest with MAE (40.01%). Measurement of total anthocyanin content revealed that HHPAE and SFE methods yielded the highest anthocyanin concentrations, with 248.49 and 244.98 mg/L, respectively. Identification of anthocyanin by LC–MS revealed that the main anthocyanidins in red onion peel are pelargonidin, cyanidin, delphinidin, and petunidin. These results indicate that innovative green extraction methods, particularly HHPAE and SFE, can effectively replace conventional techniques due to their superior efficiency and enhanced preservation of anthocyanin compounds.
The role of firm life cycle on capital structure of family firms over non‐family firms: Empirical evidence from India
Authors: Khurana Manpreet Kaur , Sharma Shweta , Miah Muhammad Shahin 
Published: July 2024

AbstractThis study attempts to identify and compare the critical determinants and the speed of adjustment to optimal capital structure across various stages of the firm life cycle (FLC). Signifying the attitude of family firms (FFs) owing to risk aversion and the need to preserve firm control, the study differentiates the debt policies of family and non‐family firms (NFFs) in an emerging economy. We use a target adjustment model and two‐step system generalised method of moments to analyse panel data on a sample of 1435 listed non‐financial firms spanning from 2013 to 2022. We find that compared to NFFs, FFs are inherently more indebted and adjust faster towards achieving optimal capital structure. Next, we find that firm's profitability, liquidity and tangibility are the major factors that significantly impact the quantity of debt across different stages of the FLC in both FFs and NFFs. Our results are robust to a battery of sensitivity tests. Our study suggests the significance of appropriate capital structure at different stages of the FLC.
Microtubule depolymerization induces ferroptosis in neuroblastoma cells
Authors: Bandekar Mayuri , Panda Dulal 
Published: July 2024

AbstractEstramustine (EM), a clinically successful hormone‐refractory anti‐prostate cancer drug, exhibited potent anti‐proliferative activity, depolymerized microtubules, blocked cells at mitosis, and induced cell death in different cancer cells. Altered iron metabolism is a feature of cancer cells. Using EM, we examined the plausible relationship between microtubule depolymerization and induction of ferroptosis in human neuroblastoma (SH‐SY5Y and IMR‐32) cells. EM reduced glutathione (GSH) levels and induced reactive oxygen species (ROS) generation. The pre‐treatment of neuroblastoma cells with ROS scavengers (N‐acetyl cysteine and dithiothreitol) reduced the anti‐proliferative effects of EM. EM treatment increased labile iron pool (LIP), depleted glutathione peroxidase 4 (GPX4) levels, and lipid peroxidation, hallmark features of ferroptosis, highlighting ferroptosis induction. Ferroptosis inhibitors (deferoxamine mesylate and liproxstatin‐1) abrogated the cytotoxic effects of EM, further confirming ferroptosis induction. Vinblastine and nocodazole also increased LIP and induced lipid peroxidation in neuroblastoma cells. This study provides evidence for the coupling of microtubule integrity to ferroptosis. The results also suggest that microtubule‐depolymerizing agents may be considered for developing pro‐ferroptosis chemotherapeutics.