bluuebunny/crossref_metadata_2025_split huggingface dataset:
Molecular identification and antifungal susceptibility profile of Aspergillus flavus isolates recovered from clinical specimens in Kuwait
Authors: Al-Wathiqi Faten , Ahmad Suhail , Khan Ziauddin 
Published: March 2013

Abstract

Background
Within the genus Aspergillus, A. flavus is the second most important species of clinical significance. It is predominantly associated with infections involving sinuses, eye and skin, mostly in geographic regions with hot and arid climate, including the Middle East. Recent reports on emergence of resistance to triazoles among Aspergillus spp. is a cause of concern for treatment of patients with invasive aspergillosis. In this study we present data on genetic characterization and antifungal susceptibility profile of clinical and environmental isolates of A. flavus.

Methods
Ninety-nine Aspergillus section Flavi isolates, originating from clinical (n=92) and environmental (n=7) sources, initially identified by morphological characteristics, were analyzed by partial sequencing of β-tubulin and calmodulin gene fragments and their susceptibilities to six antifungal agents was determined by Etest on RPMI1640 and Muller-Hinton agar media. Etest minimum inhibitory concentrations (MICs) of amphotericin B and voriconazole were also compared with zone of inhibition diameters obtained by disc diffusion test on RPMI agar medium.

Results
The identity of all clinical and environmental isolates was confirmed as A. flavus species by combined analysis of β-tubulin and calmodulin genes. The mean MIC90 (μg/ml) values on RPMI medium for amphotericin B, voriconazole, posaconazole, anidulafungin, micafungin and caspofungin were 3, 0.25, 0.25, 0.002, 0.002 and 0.032, respectively. No environmental isolate exhibited MIC value of >2 μg/ml for amphotericin B. For clinical isolates, the zone of inhibition diameters for amphotericin B and voriconazole ranged from 7–16 mm and 24–34 mm, respectively. Linear regression analysis between Etest MIC values and disk diffusion diameters revealed a significant inverse correlation with amphotericin B (p <0.001) and voriconazole (p<0.003).

Conclusions
The β-tubulin and calmodulin gene sequences confirmed that all 92 clinical isolates identified phenotypically belonged to A. flavus taxon, thus suggesting that the other species within Aspergillus section Flavi are of little clinical significance. Triazoles and echinocandins showed very good in vitro activity against the A. flavus, however, 10% clinical isolates showed MICs of >2 μg/ml for amphotericin B.
Association of Mediterranean diet, dietary supplements and alcohol consumption with breast density among women in South Germany: a cross-sectional study
Authors: Voevodina Olga , Billich Christian , Arand Birke , Nagel Gabriele 
Published: March 2013

Abstract

Background
Effects of dietary factors, such as adherence to Mediterranean diet, multivitamin-multimineral supplements use and alcohol consumption on mammographic breast density, an important biomarker of breast cancer risk, are not sufficiently consistent to elaborate preventive recommendations. This study aims to investigate the association between current diet and mammographic density.

Methods
We performed a cross-sectional study in 424 pre- and post-menopausal women aged 21 to 84 years. Current Mediterranean dietary pattern, multivitamin-multimineral supplements use, alcohol consumption and potential confounders were assessed with a self-administered questionnaire in the University Hospital Ulm (2007–2008). Radiologists evaluated mammographic density according to the American College of Radiology (ACR) classification, which was summarized in low = ACR1/2 and high = ACR3/4 mammographic density. Logistic regression models were used to assess the association between current diet and mammographic density.

Results
Adherance to Mediterranean dietary pattern was inversely associated with mammographic density in the models adjusted for age and BMI (per 1 unit increase of score OR 0.95; 95%CI 0.90–0.997). Current use of multivitamin-multimineral supplements was also inversely associated with mammographic density (OR 0.53; 95%CI 0.34–0.83). Further adjustment revealed similar point estimates but the associations were no longer statistically significant. Compared to non-drinkers, excessive alcohol consumption (<10 g/d) was positively associated with mammographic density (OR 1.47; 95%CI 0.82-2.63).

Conclusions
Our results show that dietary factors are associated with mammographic density. Adherence to Mediterranean diet and current use of multivitamin-multimineral supplements could be inversely associated with mammographic density and may suggest a protective effect against breast cancer, whereas high alcohol consumption was associated with increased mammographic density.
Heterogeneity in health status and the influence of patient characteristics across patients seeking musculoskeletal orthopaedic care – a cross-sectional study
Authors: Perruccio Anthony V , Gandhi Rajiv , Rampersaud Y Raja 
Published: March 2013

Abstract

Background
Health status is an important predictor of patient outcomes. Consequently, identifying patient predictors of health status is essential. In musculoskeletal orthopaedic care, the majority of work examining the association between patient characteristics and health status has been undertaken among hip/knee cohorts. We investigate these associations comparing findings across four musculoskeletal cohorts (hip/knee; foot/ankle; neck/back; elbow/shoulder).

Methods
Patients seeking elective musculoskeletal orthopaedic care were recruited prior to consultation. Questionnaires captured health domain status (bodily pain, physical functioning, and mental and general health) and covariates: demographics; socioeconomic characteristics; and comorbidity. Scores were compared across cohorts. Two path regression analyses were undertaken. First, domain scores were simultaneously examined as dependent variables in the overall sample. Subsequently, the model was assessed stratified by cohort.

Results
1,948 patients: 454 neck/back, 767 hip/knee, 378 shoulder/elbow, 349 foot/ankle. From stratified analyses, significant variability in covariate effects was observed. Worse bodily pain scores were associated with increasing age and female sex among hip/knee, low income among foot/ankle, and overweight/obese for foot/ankle and hip/knee. Worse mental health scores were associated with low income across cohorts except elbow/shoulder, low education within neck/back, and compared to Whites, Blacks had significantly worse scores among foot/ankle, better scores among hip/knee. Worse general health scores were observed for Asians among hip/knee, Blacks among foot/ankle, and South-Asians among elbow/shoulder and neck/back.

Conclusion
The substantial heterogeneity across musculoskeletal cohorts suggests that patient- and cohort-specific approaches to patient counsel and care may be more effective for achieving optimal health and outcomes.
Synthesis and performances of bio-sourced nanostructured carbon membranes elaborated by hydrothermal conversion of beer industry wastes
Authors: El Korhani Oula , Zaouk Doumit , Cerneaux Sophie , Khoury Randa , Khoury Antonio , Cornu David 
Published: March 2013

Abstract
Hydrothermal carbonization (HTC) process of beer wastes (Almaza Brewery) yields a biochar and homogeneous carbon-based nanoparticles (NPs). The NPs have been used to prepare carbon membrane on commercial alumina support. Water filtration experiments evidenced the quasi-dense behavior of the membrane with no measurable water flux below an applied nitrogen pressure of 6 bar. Gas permeation tests were conducted and gave remarkable results, namely (1) the existence of a limit temperature of utilization of the membrane, which was below 100°C in our experimental conditions, (2) an evolution of the microstructure of the carbon membrane with the operating temperature that yielded to improved performances in gas separation, (3) the temperature-dependent gas permeance should follow a Knudsen diffusion mechanism, and (4) He permeance was increasing with the applied pressure, whereas N2 and CO2 permeances remained stable in the same conditions. These results yielded an enhancement of both the He/N2 and He/CO2 permselectivities with the applied pressure. These promising results made biomass-sourced HTC-processed carbon membranes encouraging candidates as ultralow-cost and sustainable membranes for gas separation applications.
Organic materials in the wall paintings in Pompei: a case study of Insuladel Centenario
Authors: Casoli Antonella , Santoro Sara 
Published: March 2013

Abstract

Background
The present research concerns the Roman wall paintings preserved at Insula del Centenario (IX, 8), the important Pompeian block situated in the Regio IX, along Via di Nola.

Results
The aims of this research are two: to verify the presence of lipidic and proteinaceous material to spread the pigments, and to identify organic matter in painting materials owing to previous restoration works. The samples collected from the wall paintings of different rooms have been investigated by Fourier Transform Infrared Spectroscopy (FT-IR), and Gas Chromatography/ Mass Spectrometry (GC/MS).

Conclusions
The analytical results show that these Roman wall paintings were realized without the use of lipidic and proteinaceous materials, supposedly in fresco technique. Moreover, it was detected that wax, egg, and animal glue were used in previous restoration works for protective purpose and to restore the wall paintings to their original brilliant colours.
Abundance, behavior and entomological inoculation rates of anthropophilic anophelines from a primary Colombian malaria endemic area
Authors: Naranjo-Diaz Nelson , Rosero Doris A , Rua-Uribe Guillermo , Luckhart Shirley , Correa Margarita M 
Published: March 2013

Abstract

Background
In Colombia for several years, the Urabá-Bajo Cauca and Alto Sinú region has registered the highest numbers of malaria cases in the country. Malaria vector incrimination and the characterization of entomological parameters will allow for a better understanding of malaria transmission dynamics and the design of effective vector control strategies for this region.

Methods
We conducted a longitudinal survey between November 2008 and June 2010 to quantify entomological (abundance and biting activity) and transmission parameters, including infection rate (IR) and entomological inoculation rate (EIR), to incriminate potential anopheline vectors in three localities of a major Colombian malaria endemic region, the Urabá-Bajo Cauca and Alto Sinú: La Capilla, Juan Jose and El Loro.

Results
A total of 5,316 anopheline mosquitoes corresponding to seven species were collected. Anopheles nuneztovari (69.5%) and Anopheles darlingi (22.2%) were the most abundant species, followed by Anopheles pseudopunctipennis (4.5%), Anopheles albitarsis s.l. (2%), Anopheles triannulatus lineage Northwest (1.8%), Anopheles punctimacula and Anopheles argyritarsis (at < 1%, each). Three species were naturally infected with Plasmodium vivax, An. nuneztovari, An. darlingi (IRs < 1%) and An. triannulatus (IR = 1.5%). Annual EIRs for these species ranged from 3.5 to 4.8 infective bites per year.

Conclusions
These results indicate that An. nuneztovari and An. darlingi continue to be the most important malaria vectors in this region. Anopheles triannulatus, a species of local importance in other South American countries was found naturally infected with Plasmodium vivax VK247; therefore, further work should be directed to understand if this species has a role in malaria transmission in this region.
Diversified pattern of the human colorectal cancer microbiome
Authors: Geng Jiawei , Fan Hong , Tang Xiaodan , Zhai Huiqin , Zhang Zhigang 
Published: March 2013

Abstract

Background
The aim of this study is to expand existing knowledge about the CRC-associated microbiome among Han Chinese, and to further discover the variation pattern of the human CRC microbiome across all population.

Findings
Using pyrosequencing-based molecular monitoring of bacterial 16S rRNA gene from eight tumor/normal tissue pairs of eight Chinese CRC patients, we analyzed and characterized the basic features of the CRC-associated microbiome. Firstly, we discovered an increasing diversity among tumor-associated bacterial communities. Secondly, in 50% of Chinese CRC patients, we found a significant increase of Roseburia (P = 0.017), and a concurrent decrease of both Microbacterium (P = 0.009) and Anoxybacillus (P = 0.009) in tumor tissue.

Conclusions
We discovered a novel CRC microbiome pattern in Chinese. Both the over-represented Roseburia bacteria at tumor sites and the over-represented Microbacterium and Anoxybacillus bacteria away from tumor sites were both closely related in Chinese CRC patients. Across several populations reported in this study and previously, we observed both common and distinctive patterns of human CRC microbiome’s association with a high-risk of CRC.
Immediate non-traumatic postmortem computed tomographic demonstration of myocardial intravascular gas of the left ventricle: effects from cardiopulmonary resuscitation
Authors: Okuda Takahisa , Shiotani Seiji , Kobayashi Tomoya , Kohno Mototsugu , Hayakawa Hideyuki , Kikuchi Kazunori , Suwa Kunio 
Published: March 2013

Summary
An 87-year-old man was found in a state of cardiopulmonary arrest. Despite cardiopulmonary resuscitation (CPR) for over 1 hour by emergency technicians and physicians, the patient died. Immediate postmortem computed tomography showed cardiovascular gas in the right atrium, right ventricle, and left ventricle. Cardiovascular gas in the left ventricle was located in the myocardium and appeared as linear or branch-shaped suggesting the presence of myocardial intravascular gas. This is the first report describing the appearance and significance of myocardial intravascular gas of the left ventricle as a CPR-related change.
Functional neuronal network activity differs with cognitive dysfunction in childhood-onset systemic lupus erythematosus
Authors: DiFrancesco Mark W , Gitelman Darren R , Klein-Gitelman Marisa S , Sagcal-Gironella Anna Carmela P , Zelko Frank , Beebe Dean , Parrish Todd , Hummel Jessica , Ying Jun , Brunner Hermine I 
Published: March 2013

Abstract
Introduction
Neuropsychiatric manifestations are common in childhood-onset systemic lupus erythematosus (cSLE) and often include neurocognitive dysfunction (NCD). Functional magnetic resonance imaging (fMRI) can measure brain activation during tasks that invoke domains of cognitive function impaired by cSLE. This study investigates specific changes in brain function attributable to NCD in cSLE that have potential to serve as imaging biomarkers.

Methods
Formal neuropsychological testing was done to measure cognitive ability and to identify NCD. Participants performed fMRI tasks probing three cognitive domains impacted by cSLE: visuoconstructional ability (VCA), working memory, and attention. Imaging data, collected on 3-Tesla scanners, included a high-resolution T1-weighted anatomic reference image followed by a T2*-weighted whole-brain echo planar image series for each fMRI task. Brain activation using blood oxygenation level-dependent contrast was compared between cSLE patients with NCD (NCD-group, n = 7) vs. without NCD (noNCD-group, n = 14) using voxel-wise and region of interest-based analyses. The relationship of brain activation during fMRI tasks and performance in formal neuropsychological testing was assessed.

Results
Greater brain activation was observed in the noNCD-group vs. NCD-group during VCA and working memory fMRI tasks. Conversely, compared to the noNCD-group, the NCD-group showed more brain activation during the attention fMRI task. In region of interest analysis, brain activity during VCA and working memory fMRI tasks was positively associated with the participants' neuropsychological test performance. In contrast, brain activation during the attention fMRI task was negatively correlated with neuropsychological test performance. While the NCD group performed worse than the noNCD group during VCA and working memory tasks, the attention task was performed equally well by both groups.

Conclusions
NCD in patients with cSLE is characterized by differential activation of functional neuronal networks during fMRI tasks probing working memory, VCA, and attention. Results suggest a compensatory mechanism allows maintenance of attentional performance under NCD. This mechanism appears to break down for the VCA and working memory challenges presented in this study. The observation that neuronal network activation is related to the formal neuropsychological testing performance makes fMRI a candidate imaging biomarker for cSLE-associated NCD.
Electric potential source localization reveals a borehole leak during hydraulic fracturing
Authors: Haas A. K. , Revil A. , Karaoulis M. , Frash L. , Hampton J. , Gutierrez M. , Mooney M. 
Published: March 2013

A laboratory experiment was performed to see if passively recorded electric signals can be inverted to retrieve the position of fluid leakages along a well during an attempt to hydraulically fracture a porous block in the laboratory. The cubic block was instrumented with 32 nonpolarizing sintered Ag/AgCl electrodes. During the test, several events were detected corresponding to fluid leakoff along the seal of the well. Each event showed a quick burst in the electric field followed by an exponential-type relaxation of the potential distribution over time. The occurrence of these “electric” events was always correlated with a burst in the acoustic emissions and a change in the fluid pressure. These self-potential data were inverted in two steps: (1) using a deterministic least-square algorithm with focusing to retrieve the position of the source current density in the block for a given snapshot in the electric potential distribution and (2) using a genetic algorithm to refine the position of the source current density on a denser grid. The results of the inversion were found to be in excellent agreement with the position of the well where the hydraulic test was performed and with the localization of the acoustic emissions in the vicinity of this well. This experiment indicates that passively recorded electric signals can be used to monitor fluid flow along the well during leakages, and perhaps monitor fluid flow for numerous applications involving hydromechanical disturbances.
Free-Standing PEDOT:PSS/PLA Bilayer Nanosheets with Ink-Jet Patterned Microelectrodes: Towards the Development of Ultra-Thin, Conformable, Floating Circuits and Smart Biointerfaces.
Authors: Zucca Alessandra , Greco Francesco , Mazzolai Barbara , Mattoli Virgilio 
Published: March 2013

ABSTRACTNovel solutions and applications in the biomedical field could come from exploiting the electroactive properties of conducting polymers towards the development of responsive smart biointerfaces and of flexible, conformable, biocompatible systems. In this sense it is mandatory to control material’s conductivityin situand this requires the development of suitable patterning processes and the fabrication of individually addressable microelectrodes. Based on the recent introduction by our group of free-standing nanofilms of conductive polymers, the aim of this work was to describe a method for the fabrication of patterned ultra-thin free-standing PEDOT:PSS/Poly (lactic acid) (PLA) bilayer nanosheets. The proposed method involves an ink-jet patterning technique, based on localized overoxidation of PEDOT:PSS by means of a sodium hypochlorite solution. Here we described the fabrication method and characterized the realized nanosheets in terms of their thickness, contact angle, conductivity. The overall process permitted to realize patterned free-standing nanosheets that, despite their low thickness, are very robust and conformable on tissues or on soft and rigid substrates, while allowing for an electrical control of their surface properties. Possible applications are foreseen in the field of conformable electronics, e.g. as electrodes on the brain or smart conductive substrates for cell culturing and stimulation.
Roll-to-Roll Apparatus for Residue-Free Direct Stamping of Functional Nano-Inks
Authors: Kim Jiseok , Hsieh Ting , Kim Woo Soo 
Published: March 2013

ABSTRACTA tabletop prototype of a roll-to-roll (R2R) direct stamping apparatus has been developed. The prototype is about 100 cm long, 30 cm wide and 40 cm high and is operational up to the web speed of 1 m/min. While upper rolls carry a web with a patterned stamp on it clockwise, a sprayer on top of the R2R apparatus dispenses the nano-ink to fill in the stamp. Two other rolls with adhesive films completely remove the residual layer on the stamp. Final products remain on the substrate after de-stamping in which the web rolls up and the substrate moves to the further right. This roll-to-roll direct stamping apparatus demonstrates high throughput and material efficiency for fabrication of flexible micro- and nano-electronic devices.
Ab-Initio Pseudopotential Calculations of Phosphorus Diffusion in Silicon
Authors: Liu Xiang-Yang , Windl Wolfgang , Masquelier Michael P. 
Published: March 2013

AbstractIn traditional models of P diffusion in Si, vacancy assisted diffusion mechanism has been assumed. More recently, experiments have determined that for intrinsic P diffusion in Si, the interstitial assisted diffusion mechanism dominates. We have performed ab-initio pseudopotential calculations to study P diffusion in Si. Special care is taken with regard to structure minimization, charge state effects and corrections. We calculated the defect formation energies and migration barriers for the various competing P-interstitial complex diffusion mechanisms for low concentration P region, as well as the energetics of different charge states P-vacancy complex diffusion. For interstitial mediated diffusion of P-Sii pair in Si, we find the overall diffusion activation energies calculated are 3.1 eV for neutral case, and 3.4 eV for +1 charge case. This is in agreement with experimental observation that the interstitial mechanism dominates for intrinsic P diffusion in Si. For vacancy mediated diffusion, our calculations are in agreement with previous calculations result in the neutral case. We obtained the lower bounds for diffusion activation energy of 3.8 eV for (PV)0 and 3.4 eV for (PV). A further evaluation of the numbers would require a proper treatment of the energy states in the band-gap due to Jahn-Teller relaxations.