bluuebunny/crossref_metadata_2025_split huggingface dataset:
Elucidating the crosstalk mechanism between IFN-gamma and IL-6 via mathematical modelling
Authors: Qi Yun-feng , Huang Yan-xin , Wang Hong-yan , Zhang Yu , Bao Yong-li , Sun Lu-guo , Wu Yin , Yu Chun-lei , Song Zhen-bo , Zheng Li-hua , Sun Ying , Wang Guan-nan , Li Yu-xin 
Published: February 2013

Abstract

Background
Interferon-gamma (IFN-gamma) and interleukin-6 (IL-6) are multifunctional cytokines that regulate immune responses, cell proliferation, and tumour development and progression, which frequently have functionally opposing roles. The cellular responses to both cytokines are activated via the Janus kinase/signal transducer and activator of transcription (JAK/STAT) pathway. During the past 10 years, the crosstalk mechanism between the IFN-gamma and IL-6 pathways has been studied widely and several biological hypotheses have been proposed, but the kinetics and detailed crosstalk mechanism remain unclear.

Results
Using established mathematical models and new experimental observations of the crosstalk between the IFN-gamma and IL-6 pathways, we constructed a new crosstalk model that considers three possible crosstalk levels: (1) the competition between STAT1 and STAT3 for common receptor docking sites; (2) the mutual negative regulation between SOCS1 and SOCS3; and (3) the negative regulatory effects of the formation of STAT1/3 heterodimers. A number of simulations were tested to explore the consequences of cross-regulation between the two pathways. The simulation results agreed well with the experimental data, thereby demonstrating the effectiveness and correctness of the model.

Conclusion
In this study, we developed a crosstalk model of the IFN-gamma and IL-6 pathways to theoretically investigate their cross-regulation mechanism. The simulation experiments showed the importance of the three crosstalk levels between the two pathways. In particular, the unbalanced competition between STAT1 and STAT3 for IFNR and gp130 led to preferential activation of IFN-gamma and IL-6, while at the same time the formation of STAT1/3 heterodimers enhanced preferential signal transduction by sequestering a fraction of the activated STATs. The model provided a good explanation of the experimental observations and provided insights that may inform further research to facilitate a better understanding of the cross-regulation mechanism between the two pathways.
Identification of a set of miRNAs differentially expressed in transiently TIA-depleted HeLa cells by genome-wide profiling
Authors: Sánchez-Jiménez Carmen , Carrascoso Isabel , Barrero Juan , Izquierdo José M 
Published: February 2013

AbstractBackgroundT-cell intracellular antigen (TIA) proteins function as regulators of cell homeostasis. These proteins control gene expression globally at multiple levels in response to dynamic regulatory changes and environmental stresses. Herein we identified a micro(mi)RNA signature associated to transiently TIA-depleted HeLa cells and analyzed the potential role of miRNAs combining genome-wide analysis data on mRNA and miRNA profiles.ResultsUsing high-throughput miRNA expression profiling, transient depletion of TIA-proteins in HeLa cells was observed to promote significant and reproducible changes affecting to a pool of up-regulated miRNAs involving miR-30b-3p, miR125a-3p, miR-193a-5p, miR-197-3p, miR-203a, miR-210, miR-371-5p, miR-373-5p, miR-483-5p, miR-492, miR-498, miR-503-5p, miR-572, miR-586, miR-612, miR-615-3p, miR-623, miR-625-5p, miR-629-5p, miR-638, miR-658, miR-663a, miR-671-5p, miR-769-3p and miR-744-5p. Some up-regulated and unchanged miRNAs were validated and previous results confirmed by reverse transcription and real time PCR. By target prediction of the miRNAs and combined analysis of the genome-wide expression profiles identified in TIA-depleted HeLa cells, we detected connections between up-regulated miRNAs and potential target genes. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) database analysis suggest that target genes are related with biological processes associated to the regulation of DNA-dependent transcription, signal transduction and multicellular organismal development as well as with the enrichment of pathways involved in cancer, focal adhesion, regulation of actin cytoskeleton, endocytosis and MAPK and Wnt signaling pathways, respectively. When the collection of experimentally defined differentially expressed genes in TIA-depleted HeLa cells was intersected with potential target genes only 7 out of 68 (10%) up- and 71 out of 328 (22%) down-regulated genes were shared. GO and KEGG database analyses showed that the enrichment categories of biological processes and cellular pathways were related with innate immune response, signal transduction, response to interleukin-1, glomerular basement membrane development as well as neuroactive ligand-receptor interaction, endocytosis, lysosomes and apoptosis, respectively.ConclusionAll this considered, these observations suggest that individual miRNAs could act as potential mediators of the epigenetic switch linking transcriptomic dynamics and cell phenotypes mediated by TIA proteins.
In-line filtration minimizes organ dysfunction: New aspects from a prospective, randomized, controlled trial
Authors: Boehne Martin , Jack Thomas , Köditz Harald , Seidemann Kathrin , Schmidt Florian , Abura Michaela , Bertram Harald , Sasse Michael 
Published: February 2013

Abstract

Background
Infused particles induce thrombogenesis, impair microcirculation and modulate immune response. We have previously shown in critically ill children, that particle-retentive in-line filtration reduced the overall complication rate of severe events, length of stay and duration of mechanical ventilation. We now evaluated the influence of in-line filtration on different organ function and thereby elucidated the potential underlying pathophysiological effects of particle infusion.

Methods
In this single-centre, prospective, randomized controlled trial 807 critically ill children were assigned to either control (n = 406) or filter group (n = 401), the latter receiving in-line filtration for complete infusion therapy. Both groups were compared regarding the differences of incidence rates and its 95% confidence interval (CI) of different organ dysfunction as defined by the International Pediatric Sepsis Consensus Conference 2005.

Results
The incidence rates of respiratory (−5.06%; 95% CI, −9.52 to −0.59%), renal (−3.87%; 95% CI, −7.58 to −0.15%) and hematologic (−3.89%; 95% CI, −7.26 to −0.51%) dysfunction were decreased in the filter group. No difference was demonstrated for the occurrence rates of cardiovascular, hepatic, or neurologic dysfunction between both groups.

Conclusions
In-line filtration has beneficial effects on the preservation of hematologic, renal and respiratory function in critically ill patients. The presented clinical data further support our hypothesis regarding potential harmful effects of particles. In critically ill patients infused particles may lead to further deterioration of the microcirculation, induce a systemic hypercoagulability and inflammation with consecutive negative effects on organ function.

Trial registration
ClinicalTrials.gov number; NCT00209768
Traumatic experiences and mental health consequences among child survivors of the 2008 Sichuan earthquake: a community-based follow-up study
Authors: Jia Zhaobao , Shi Lizheng , Duan Guangfeng , Liu Weizhi , Pan Xiao , Chen Yingyao , Tian Wenhua 
Published: February 2013

Abstract

Background
The study was implemented to examine the relationship between traumatic experiences and longitudinal development of mental health for children and adolescents who survived the 2008 Sichuan earthquake.

Methods
Using the method of multistage systematic sampling, 596 children aged between 8 and 16 years were randomly selected from severely affected areas of the earthquake. These children were interviewed with standardized instruments of posttraumatic stress disorder (PTSD) and depression at the 15th month after the earthquake, and re-interviewed at the 36th month.

Results
From the initial to the follow-up assessments, there were no significant changes in both PTSD and depression scores. In addition, no significant change was found on the overall prevalence rates of the symptoms: from 12.4% to 10.7% for PTSD, from 13.9% to 13.5% for depression, and from 4.2% to 4.7% for their co-occurrence. The study also indicated that the earthquake might have a delayed impact on the psychosocial functioning of children and adolescents who were not directly affected by the disaster.

Conclusions
For child and adolescent survivors of the earthquake, symptoms of PTSD and depression seemed to persist over time. The finding that children reduced their use of mental health services raised great concerns over how to fulfill the unmet psychological needs of these children. More mental health interventions should be allocated to children who had elevated risk for developing persistent course of the symptoms.
Some results on fixed points of α-ψ-Ciric generalized multifunctions
Authors: Mohammadi B , Rezapour S , Shahzad N 
Published: February 2013

Abstract
In 2012, Samet, Vetro and Vetro introduced α-ψ-contractive mappings and gave some results on a fixed point of the mappings (Samet et al. in Nonlinear Anal. 75:2154-2165, 2012). In fact, their technique generalized some ordered fixed point results (see (Alikhani et al. in Filomat, 2012, to appear) and (Samet et al. in Nonlinear Anal. 75:2154-2165, 2012)). By using the main idea of (Samet et al. in Nonlinear Anal. 75:2154-2165, 2012), we give some new results for α-ψ-Ciric generalized multifunctions and some related self-maps. Also, we give an affirmative answer to a recent open problem which was raised by Haghi, Rezapour and Shahzad in 2012.
Multidimensionality and scale in a landscape ethnoecological partitioning of a mountainous landscape (Gyimes, Eastern Carpathians, Romania)
Authors: Babai Dániel , Molnár Zsolt 
Published: February 2013

AbstractBackgroundTraditional habitat knowledge is an understudied part of traditional knowledge. Though the number of studies increased world-wide in the last decade, this knowledge is still rarely studied in Europe. We document the habitat vocabulary used by Csángó people, and determine features they used to name and describe these categories.Study area and methodsCsángó people live in Gyimes (Carpathians, Romania). The area is dominated by coniferous forests, hay meadows and pastures. Animal husbandry is the main source of living. Data on the knowledge of habitat preference of 135 salient wild plant species were collected (2908 records, 44 interviewees). Data collected indoors were counterchecked during outdoor interviews and participatory field work.ResultsCsángós used a rich and sophisticated vocabulary to name and describe habitat categories. They distinguished altogether at least 142–148 habitat types, and named them by 242 habitat terms. We argue that the method applied and the questions asked (‘what kind of place does species X like?’) helped the often implicit knowledge of habitats to be verbalized more efficiently than usual in an interview. Habitat names were highly lexicalized and most of them were widely shared. The main features were biotic or abiotic, like land-use, dominant plant species, vegetation structure, successional stage, disturbance, soil characteristics, hydrological, and geomorphological features. Csángós often used indicator species (28, mainly herbaceous taxa) in describing habitats of species. To prevent reduction in the quantity and/or quality of hay, unnecessary disturbance of grasslands was avoided by the Csángós. This could explain the high number of habitats (35) distinguished dominantly by the type and severity of disturbance. Based on the spatial scale and topological inclusiveness of habitat categories we distinguished macro-, meso-, and microhabitats.ConclusionsCsángó habitat categories were not organized into a single hierarchy, and the partitioning was multidimensional. Multidimensional description of habitats, made the nuanced characterization of plant species’ habitats possible by providing innumerable possibilities to combine the most salient habitat features. We conclude that multidimensionality of landscape partitioning and the number of dimensions applied in a landscape seem to depend on the number of key habitat gradients in the given landscape.
The incidence of early post-operative complications following uvulopalatopharyngoplasty: Identification of predictive risk factors
Authors: Kandasamy Thileeban , Wright Erin D , Fuller John , Rotenberg Brian W 
Published: February 2013

Objective Characterize complications following uvulopalatopharyngoplasty (UPPP) for obstructive sleep apnea. Study design Retrospective chart review. Subjects and methods Charts of patients undergoing UPPP at an academic teaching hospital from 1999 to 2005 were reviewed. Results 345 consecutive patients (248 inpatients; 97 outpatients) were studied. The most common post-operative complication in the entire study was oxyhemoglobin desaturation (12.8%). Three patients suffered major complications (airway obstruction, pulmonary edema, arrhythmia). Regarding complications limited to the post-anaesthetic care unit alone, only 8.2% of patients had oxyhemoglobin desaturation after discontinuation of oxygen supplementation. Inpatients requiring supplemental oxygen on the ward had significantly higher mean AHI (37.4 vs. 31.4; p=0.05) and BMI (32.3 kg/m2 vs. 28.9 kg/m2; p=0.004) than those who did not. Those inpatients who were obese (BMI > 30 kg/m2) with an AHI≥22 were associated with an increased risk of requiring oxygen on the ward (odds ratio = 3.48, 95% CI = 1.56 – 7.78). Conclusion The incidence of post-UPPP complications is much lower than the literature has historically suggested. Selected patients should be able to safely undergo outpatient UPPP. Patients with higher AHI, higher BMI, or multiple comorbidities are at higher risk for postoperative complications and are most appropriate for overnight monitoring.
High-mobility group protein B1: a new biomarker of metabolic syndrome in obese children
Authors: Arrigo Teresa , Chirico Valeria , Salpietro Vincenzo , Munafò Caterina , Ferraù Valeria , Gitto Eloisa , Lacquaniti Antonio , Salpietro Carmelo 
Published: February 2013

IntroductionObesity is associated with a chronic low-grade inflammation. High-mobility group box 1 protein (HMGB1) plays a key role in inflammation and immunostimulatory and chemotactic processes. The aim of the study was to assess the role of HMGB1 in obese children and to evaluate its diagnostic profile in identifying childhood obesity-related complications, such as the metabolic syndrome (MS).Patients and methodsSixty obese children were enrolled and compared with 40 healthy children (control). Homeostasis model assessment of insulin resistance (HOMA-IR), lipid profile, thyroid hormones, and pro- and anti-inflammatory peptides such as C-reactive protein (CRP), adiponectin, interleukin 6 (IL6), IL18, IL23, TNFα, resistin, and HMGB1 were evaluated. Receiver operating characteristics (ROC) analysis was employed to calculate the area under the curve (AUC) for HMGB1, IL6, and adiponectin to find the best cutoff values capable of identifying MS in obese children.ResultsHMGB1 levels were statistically higher in obese patients than in the control group (19.4±6.8 vs 3.7±1.2 ng/ml;P<0.0001). In obese patients, IL18, IL6, and resistin levels were significantly high, while adiponectin levels were low. At multivariate analysis, HMGB1 was found to be independently correlated with BMI, IL23, IL6, free triiodothyronine, HDL, and HOMA-IR. At ROC analysis, HMGB1 showed higher sensitivity and specificity (AUC, 0. 992; sensitivity, 94.7%; specificity, 97.5%) than IL6 and adiponectin in identifying MS in obese children.ConclusionHMGB1 plays an important role in the inflammatory process associated with childhood obesity. This peptide may be an important diagnostic marker for obesity-related complications, such as MS.
An Overview of Dry Sliding Wear of Two-Phase FeNiMnAl Alloys
Authors: Wu Xiaolan , Meng Fanling , Baker Ian , Wu Hong , Munroe Paul R. 
Published: February 2013

ABSTRACTThe pin-on-disc wear behavior of nanostructured two-phase Fe30Ni20Mn20Al30 and eutectic lamellar-structured Fe30Ni20Mn35Al15 is compared emphasizing the influence of the microstructure and mechanical properties of alloys as well as the effect of test environment. Although the wear of both alloys was greater in oxygen-containing environments, eutectic Fe30Ni20Mn35Al15 is less sensitive to oxygen than nanostructured Fe30Ni20Mn20Al30. Abrasive wear dominated during the wear in all cases, while plastic deformation also occurred during the wear of eutectic Fe30Ni20Mn35Al15. A tribolayer of zirconia, which was embedded in the surface of the wear pin, was characterized using a scanning transmission electron microscope equipped with an energy dispersive spectrometer.
TiO2 Film Morphology, Electron Transport and Electron Lifetime in Ultra-fast Sintered Dye-sensitized Solar Cells
Authors: Carnie Matthew J. , Charbonneau Cecile , Davies Matthew , Mabbett Ian , Watson Trystan , Worsley David 
Published: February 2013

ABSTRACTWith the application of near-infrared radiation (NIR), TiO2 films for dye-sensitized solar cells (DSCs) on metallic substrates can be sintered in just 12.5 s. The photovoltaic performance of devices made with NIR sintered films match those devices made with conventionally sintered films prepared by heating for 1800 s. Here we characterise the electron transport, electron lifetime and phase-morphological properties of ultrafast NIR sintered films, using impedance spectroscopy, transient photovoltage decay and x-ray diffraction measurements. An important factor in NIR processing of TiO2 films is the peak metal temperature (PMT) and we show that during the 12.5 second heat treatment that a PMT of around 635 °C gives near identical electron transport, electron lifetime and morphological properties, as well comparable photovoltaic performance to a conventionally sintered (500 °C, 30 mins) film. What is perhaps most interesting is that the rapid heating of the TiO2 (to temperatures of up to 785°C) does not lead to a large scale rutile phase transition. As such photovoltaic performance of resultant DSC devices is maintained even though the TiO2 has been at temperatures which traditionally would have reduced cell photocurrents via anatase-to-rutile phase transition.
Triple-Junction Thin-Film Silicon Solar Cells on W-Textured ZnO for Applications to Low-Concentration Photovoltaics
Authors: Kasashima Shunsuke , Moriya Yuki , Sichanugrist Porponth , Konagai Makoto 
Published: February 2013

ABSTRACTWe report for the first time the a-Si:H/μc-Si:H/μc-Si:H triple-junction solar cells fabricated on W-textured ZnO having a very high haze value which can improve light scattering effect. For further enhancement of light confinement effects, p-type a-SiOx:H and μc-SiOx:H as wide-gap window-layers, n-type μc-SiOx:H as intermediate layers and a back reflector were employed in these solar cells too. From theoretical analysis, we have found an advantage of a-Si:H/μc-Si:H/μc-Si:H structure for an application to low-concentration photovoltaics. For the fabricated solar cells, a conversion efficiency of 8.86% at 1 sun and and 9.86% under 7.2 suns, and a total photocurrent from each subcell of 24.1 mA/cm2 were achieved although there was still a current mismatch among component subcells.
Surface Acoustic Wave Devices: Materials Stability in Harsh Environments
Authors: Richter Denny , Schulz Michal , Sakharov Sergey , Davis Zachary J. , Fritze Holger 
Published: February 2013

ABSTRACTThe availability of high-temperature stable surface acoustic wave (SAW) devices would enable realization of wireless sensors for monitoring high-temperature processes. One of the most promising substrate materials for SAW based high-temperature sensors is langasite (LGS, La3Ga5SiO14). It can be excited piezoelectrically up to its melting point at 1470 °C. However, gallium evaporation and degradation of the electrodes limit the application of LGS in SAW sensors for harsh environments to some extent.The objectives of this work include the investigation of the gallium loss in the vicinity of the langasite surface in oxidizing, reducing and vacuum conditions at temperatures up to 900 °C. The gallium content in the vicinity of the LGS surface is not decreased after annealing the samples in air, while a significant gallium loss occurs in vacuum and reducing atmospheres (0.5 % H2/Ar). The latter results in a gallium oxide deficient region of 1.5 μm below the surface after annealing for 12 hours at 900 °C. The gallium loss is virtually completely suppressed after protecting the surface with a thin alumina film.Further, thin-film electrodes based on platinum and platinum/rhodium are tested. While conventional platinum based electrodes are completely destroyed at 900 °C within hours due to agglomeration, alumina protected electrodes can be operated at least for several days at this temperature. After 400 hours at 700 °C, the alumina protected platinum electrodes show insignificant degradation. The influence of alumina passivation layers on the stability of the SAW devices is examined. Different electrode configurations are tested with respect to their long-term frequency stability at 650 °C.
Microstructure and tribological properties of gray cast iron specimens coated by aluminizing, boronizing, chromizing and siliconizing
Authors: Murakami T. , Matsuzaki K. , Gomi Y. , Sasaki S. , Inui H. 
Published: February 2013

ABSTRACTIn this study, aluminized, boronized, chromized and siliconized gray cast iron plate specimens were prepared, and their microstructures and tribological properties were investigated. The surfaces of the aluminized, boronized, chromized and siliconized specimens mainly consisted of FeAl, Fe2B, (Cr, Fe)23C6 and FeSi phases, respectively. Also, the surface of the boronized specimen exhibited the highest microvickers hardness of all the specimens. The aluminized, boronized and chromized specimens exhibited friction coefficients as low as the non-coated specimens when sliding against AISI 52100 steel ball specimens in poly-alpha-olefin. In addition, the boronized and chromized specimens exhibited much higher wear resistance than the non-coated specimens.
Corrosion Resistance of Surface treated Alloy 617 in High Temperature HI and H2SO4 Environments
Authors: Kim Donghoon , Sah Injin , Choi Jin Young , Kim Young Soo , No Hee Cheon , Jang Changheui 
Published: February 2013

ABSTRACTThe sulfur-iodine thermo-chemical cycle (S-I cycle) is one of the promising nuclear hydrogen production methods combined with a high temperature gas-cooled reactor. However, extremely corrosive environments limit the selection of structural materials. Therefore, in this study, corrosion behaviors of several metallic materials were investigated to screen the candidate metallic materials. Coupon type specimens were exposed for 100 h in simulated SO3 and HI decomposer conditions at 850 °C. After 100 h exposure, the surface treated Alloy 617 showed the superior weight change in both environments. However, scanning electron microscope observation showed oxide spallation for EB-treated and NiAl coated Alloy 617. On the other hand, the Ni3Al coated Alloy 617 showed better corrosion resistance in SO3 decomposer condition, such that only formed external Al-rich oxide layer. Especially, in a HI decomposer condition, the damage on the Ni3Al coated Alloy 617 was considerably less significant probably due to the protection by very thin aluminum-rich oxide on the surface.