bluuebunny/crossref_metadata_2025_split huggingface dataset:
Apparent digestibility and calcium and phosphorus in urine after feeding different combinations of calcium and phosphorus sources to adult dogs
Authors: Hofmann Celina , Dobenecker Britta , Kienzle Ellen 
Published: August 2024

AbstractThe present study aimed to investigate the effect of the combination of a water‐soluble calcium (Ca) source (CaCl2) with a water‐soluble phosphorus (P) source (NaH2PO4*2H2O, diet soluble, SOL) in comparison to a water‐insoluble P source (CaHPO4*2H2O, diet insoluble, INS) on apparent digestibility and renal excretion of Ca and P in dogs. The Ca intake was 226 mg/kg bodyweight (bw), the Ca/P ratio 1.9/1 in SOL and 2.0/1 in INS. The percentage of Ca from CaCl2 was 60% in SOL and 33% in INS. Eight adult Foxhound‐crossbred dogs FBI, (3–5 years, bw 24–32 kg) were available. Standard digestion trials were carried out (10 days adaptation, 5 days total faecal collection). Spontaneously excreted urine was collected pre‐ and postprandially. In vitro water solubility of P in the mineral premixes was determined. The Ca digestibility was negative in both trials without significant differences between the groups. Apparent P digestibility was increased in group SOL (26% vs. 20% in INS). In both groups, P content in urine was higher pre‐ compared to postprandial, with higher concentrations in group SOL. The same was true for the P/Crea ratio. The water solubility of P in the mineral premixes used in the trials showed considerable differences: The P in premix INS was insoluble in water after 1 and after 90 min. By contrast, the P in the premix SOL was highly soluble (98%) after 1 minute. After 90 min, however, the P solubility decreased to 43%, suggesting the formation of insoluble CaP salts, presumably from CaCl2 and NaH2PO4*2H2O. In conclusion, in the present study, apparent Ca digestibility in dogs was not affected by the solubility of Ca and P, while P digestibility and renal P excretion increased.
Two decades of increasing functional and phylogenetic richness in a mountaintop flora in central Norway
Authors: Vanneste Thomas , Graae Bente J. , Kyrkjeeide Magni O. , Lindmo Sigrid , Michelsen Ottar , Naranjo‐Orrico Domenica J. , Ray Courtenay A. , Vandersteene Matthias , Verheyen Kris , De Frenne Pieter 
Published: August 2024

AbstractQuestionsAnalysing how multiple facets of biodiversity vary across space and time can help to predict the vulnerability of mountaintop floras to future environmental changes. Here we addressed the following questions: (a) Are elevational patterns of mountaintop plant diversity consistent across taxonomy, function and phylogeny? (b) How have the taxonomic, functional and phylogenetic dimensions of mountaintop plant communities changed over the past two decades? (c) Is the magnitude of these temporal trends dependent on elevation?LocationDovrefjell, central Norway.MethodsThe floristic composition of four mountaintops, spread across an elevational gradient from the tree line to the uppermost margins of vascular plant life, was surveyed every 7 years between 2001 and 2022. Six metrics of taxonomic, functional and phylogenetic richness and differentiation were calculated for each mountaintop and survey. Using these data, we assessed how richness and differentiation metrics varied over space (across the elevational gradient) and over time (between surveys).ResultsAll diversity metrics decreased towards higher elevations, except phylogenetic differentiation which increased significantly by 7% per 100 m elevational gain. Taxonomic richness remained virtually stable between 2001 and 2022, whereas phylogenetic richness increased by 7.5% per decade. Functional richness also increased, but mainly on the lowest mountaintop, by 17% per decade. No significant temporal trends in taxonomic, functional and phylogenetic differentiation were detected.ConclusionsOur findings underpin rearrangements in the functional and phylogenetic structure of mountain plant communities over the past two decades that cannot be predicted from trends in taxonomic richness alone. This highlights the necessity to look beyond species richness and consider multiple facets of biodiversity when studying environmental change impacts on mountain biodiversity and ecosystem functioning.
Increases and decreases in soil moisture in water‐limited plant communities cause asymmetrical responses in biomass but not in diversity
Authors: van den Brink Liesbeth , Canessa Rafaella , Liancourt Pierre , Neidhardt Harald , Cavieres Lohengrin A. , Oelmann Yvonne , Bader Maaike Y. , Tielbörger Katja 
Published: August 2024

AbstractAimsChanges in precipitation patterns, such as the predicted increases in the frequency of climatic extremes, are likely to alter plant communities, but whether responses to drought or to wetter conditions respectively cause consistent, opposite responses is debated. Here, we assessed the response in biomass production and species diversity of water‐limited plant communities to the direction (increase or decrease) and magnitude (micro‐ and macro‐climatic effects) of changes in soil moisture.LocationWe reciprocally translocated soils containing seed banks from two climates (semi‐arid and mediterranean) at a micro‐climatic (opposite slopes) and a macro‐climatic scale (between climates) in Chile.ResultsBiomass production for the soils that were translocated from wetter to drier climates was unrelated to the available soil moisture. The lowest biomass was produced in the wettest climate on the wet slope. Biomass production increased after a translocation to the drier climate (representing the largest change in climate). Nonetheless, the highest overall biomass for the wet to dry translocation was produced on the mediterranean dry slope with intermediate soil moisture. However, on the same mediterranean dry slope, biomass was almost zero for soil translocated the other way round (from drier to wetter). Diversity after 24 months was unaffected by micro‐climatic change, but soils transplanted toward the drier climate yielded a plant community with increased diversity.ConclusionOur results showed direction and magnitude of climate change but also the response factor that is studied matters to detect direction‐dependent responses; i.e., species richness had a linear and reversible response. However, the response of biomass depended on the origin of the transplanted material (soil and plant community), indicating history dependence (hysteresis). This emphasizes that responses to unidirectional climate manipulation experiments may not be able to capture the entire nature of the response of plant communities to climate change.
Manipulation impacts of jack mackerel meal in low fish meal diets on growth, feed availability, and biochemical composition of olive flounder (Paralichthys olivaceus) and economic analysis
Authors: Sim Yu Jin , Cho Sung Hwoan , Kim Taeho 
Published: August 2024

AbstractManipulation effects of jack mackerel meal (JMM) in the low fish meal (FM) diets substituting 50% FM with meat meal (MM) on growth performance of olive flounder and economic analysis were determined. Seven experimental diets were created. The control (Con) diet contained 60% FM. In the other diets, 50% of the FM level used for the Con diet was substituted with MM, and then graded levels (0, 10, 20, 30, 40, and 50%) of JMM were included at the expense of FM, named the MJ0, MJ10, MJ20, MJ30, MJ40, and MJ50 diets, respectively. The experimental diets were distributed to triplicate groups of fish. A total of 525 fish was divided into 21 flow‐through tanks. Fish were hand‐fed to apparent satiation for 8 weeks. Weight gain, specific growth rate (SGR), and feed consumption of fish fed the Con diet were comparable with fish fed the MJ20, MJ30, MJ40, and MJ50 diets. Weight gain, SGR, and feed consumption of fish linearly improved with JMM inclusion levels in the low FM diets replacing 50% FM with MM. The strong correlation between isoleucine and lysine content among essential amino acids in the experimental diets versus weight gain, SGR, and feed consumption of olive flounder were observed. Dietary treatments did not influence feed utilization, chemical composition, and amino acid profiles of fish. Incorporated 20%–50% JMM as an effective feed attractant and enhancer in the low FM diets replacing 50% FM with MM achieved comparable weight gain, SGR, and feed consumption to fish fed a 60% FM‐based diet. Finally, the MJ50 diet led to the highest economic profit index (EPI) for farmers.
An ultrasound multiparametric method to quantify liver fat using magnetic resonance as standard reference
Authors: De Rosa Laura , Salvati Antonio , Martini Nicola , Chiappino Dante , Cappelli Simone , Mancini Marcello , Demi Libertario , Ghiadoni Lorenzo , Bonino Ferruccio , Brunetto Maurizia R. , Faita Francesco 
Published: August 2024

AbstractBackground & AimsThere is an unmet need for a reliable and reproducible non‐invasive measure of fatty liver content (FLC) for monitoring steatotic liver disease in clinical practice. Sonographic FLC assessment is qualitative and operator‐dependent, and the dynamic quantification range of algorithms based on a single ultrasound (US) parameter is unsatisfactory.This study aims to develop and validate a new multiparametric algorithm based on B‐mode images to quantify FLC using Magnetic Resonance (MR) values as standard reference.MethodsPatients with elevated liver enzymes and/or bright liver at US (N = 195) underwent FLC evaluation by MR and by US. Five US‐derived quantitative features [attenuation rate(AR), hepatic renal‐ratio(HR), diaphragm visualization(DV), hepatic‐portal‐vein‐ratio(HPV), portal‐vein‐wall(PVW)] were combined by mixed linear/exponential regression in a multiparametric model (Steatoscore2.0). One hundred and thirty‐four subjects were used for training and 61 for independent validations; score‐computation underwent an inter‐operator reproducibility analysis.ResultsThe model is based on a mixed linear/exponential combination of 3 US parameters (AR, HR, DV), modelled by 2 equations according to AR values. The computation of FLC by Steatoscore2.0 (mean ± std, 7.91% ± 8.69) and MR (mean ± std, 8.10% ± 10.31) is highly correlated with a low root mean square error in both training/validation cohorts, respectively (R = 0.92/0.86 and RMSE = 5.15/4.62, p < .001). Steatoscore2.0 identified patients with MR‐FLC≥5%/≥10% with sensitivity = 93.2%/89.4%, specificity = 86.1%/95.8%, AUROC = 0.958/0.975, respectively and correlated with MR (R = 0.92) significantly (p < .001) better than CAP (R = 0.73).ConclusionsMultiparametric Steatoscore2.0 measures FLC providing values highly comparable with MR. It is reliable, inexpensive, easy to use with any US equipment and qualifies to be tested in larger, prospective studies as new tool for the non‐invasive screening and monitoring of FLC.
Disentangling effects of dispersal, environment and anthropogenic barriers on functional connectivity in aquatic systems
Authors: Day Casey C. , Alò Dominique , Simmons Ryan K. , Cotey Stacy R. , Zarn Katherine E. , Gazeley Ian F. , Small Maureen , Fortin Marie‐Josee , Bearlin Andrew R. , Smith Seth R. , Landguth Erin L. 
Published: August 2024

AbstractDisentangling the roles of structural landscape factors and animal movement behaviour can present challenges for practitioners managing landscapes to maintain functional connectivity and achieve conservation goals. We used a landscape genetics approach to combine robust demographic, behavioural and genetic datasets with spatially explicit simulations to evaluate the effects of anthropogenic barriers (dams, culverts) and natural landscape resistance (gradient, elevation) affecting dispersal behaviour, genetic connectivity and genetic structure in a resident population of Westslope Cutthroat Trout (Oncorhynchus clarkii lewisi). Analyses based on 10 years of sampling effort revealed a pattern of restricted dispersal, and population genetics identified discrete population clusters between distal tributaries and the mainstem stream and no structure within the mainstem stream. Demogenetic simulations demonstrated that, for this population, the effects of existing anthropogenic barriers on population structure are redundant with effects of restricted dispersal associated with the underlying environmental resistance. Our approach provides an example of how extensive field sampling combined with landscape genetics can be incorporated into spatially explicit simulation modelling to explore how, together, movement ecology and landscape resistance can be used to inform decisions around restoration and connectivity.
The epigenetic mechanism of metabolic risk in bipolar disorder
Authors: Huang Kexin , Li Sujuan , Yang Min , Teng Ziwei , Xu Baoyan , Wang Bolun , Chen Jindong , Zhao Liping , Wu Haishan 
Published: August 2024

SummaryBipolar disorder (BD) is a complex and severe mental illness that causes significant suffering to patients. In addition to the burden of depressive and manic symptoms, patients with BD are at an increased risk for metabolic syndrome (MetS). MetS includes factors associated with an increased risk of atherosclerotic cardiovascular disease (CVD) and type 2 diabetes mellitus (T2DM), which may increase the mortality rate of patients with BD. Several studies have suggested a link between BD and MetS, which may be explained at an epigenetic level. We have focused on epigenetic mechanisms to review the causes of metabolic risk in BD.
Euler‐angle norms for tooth rotation, torque and tip
Authors: Steinvorth Benjamin , Troiani Stefano , Weir Tony , Meade Maurice J. 
Published: August 2024

AbstractIntroThe aim of the current study was to develop and describe a new measuring system for the orientation of a tooth in a digitalized cast of a jaw and provide new angular values for the rotation, torque and tip of maxillary and mandibular teeth.MethodsThis retrospective cross‐sectional study involved the utilization of a sub‐group of extrinsic Euler‐angles to derive optimal norm values per tooth in three different planes of orientation (‘rotation’, ‘torque’ and ‘tip’) by evaluating the digital representations of the teeth derived from a database containing over 17,500 patients. The process involved the entry of the .stl files of the jaw pairs into a fully automated software system (Smyl:Ai, Ulm, Germany) whereupon jaw alignment, teeth segmentation, landmark identification and visual validation of input files was conducted prior to calculation of the norm values for the three different planes of orientation.ResultsThe digital scans in stereolithography (.STL)‐file format of the upper and lower dentitions of 1914 individuals with optimal occlusion were chosen and evaluated. New mean (standard deviation) angular values were determined for the rotation, torque and tip of maxillary and mandibular teeth.ConclusionThe findings facilitate the reappraisal of rotation, torque and tip values currently acceptable as ideal. They will inform anthropologists and dental researchers about occlusion and alignment in orthodontic and non‐orthodontic patients and provide baseline data for future studies. The methodology will also enable the evaluation of large numbers of data in relatively short timeframes.
miR1432 negatively regulates cold tolerance by targeting OsACAs
Authors: Dai Yan , Feng Xiujing , Liu Zheming , Wang Meng , Zhou Yun , Cui Lie , Wei Xiaoli , Zhu Zhen 
Published: August 2024

AbstractmiRNAs function as negative regulators that significantly influence plant growth and stress responses. Within rice and other monocotyledonous plants, miR1432 plays a conserved role in seed development and disease resistance. However, its involvement in the response to abiotic stresses remains unclear. Our study aimed to elucidate this mechanism by predicting the targeting of the rice P‐type IIB Ca2+ ATPase gene OsACAs by miR1432 and identifying its cleavage sites via 5′RACE. We observed induced expression of miR1432 and its target gene, OsACA6, under abiotic stresses. Overexpression (OX) of miR1432 and suppression of OsACA6 resulted in reduced cold, salt, and drought tolerance, while OsACA6 suppression/knockout and OX had opposite effects on cold tolerance. Additionally, miR1432 may target other OsACA6 homologs. RNA‐sequencing data highlighted the differential expression of stress‐related genes in miR1432‐overexpressing rice. Furthermore, miR1432‐overexpressing rice exhibited weakened vigor, dwarfism, yellowing leaves and reduced fertility. Collectively, our results strongly suggest that miR1432 not only negatively modulates abiotic stress tolerance by suppressing Ca2+ ATPase gene(s) but also influences plant growth and development.
Comparative transcriptome profiling of resistant and susceptible groundnut (Arachis hypogaea) genotypes in response to stem rot infection caused by Sclerotium rolfsii
Authors: Tatmiya Ritisha N. , Padhiyar Shital M. , Chandramohan Sangh , Bera Sandip K. , Bhatt Shradda B. , Iquebal Mir Asif , Ambalam Padma S. , Tomar Rukam S. 
Published: August 2024

AbstractThis study aimed to explore transcriptomic distinctions between resistant (CS‐319) and susceptible (JAL‐42) groundnut (Arachis hypogaea) genotypes exposed to Sclerotium rolfsii infection across different developmental stages. Employing a de novo assembly‐based approach, we analysed the transcriptomic response in these groundnut plants under control and infected conditions at 24, 72 and 120 hours post‐inoculation (hpi). Our RNA‐Seq data yielded a total of 133,900,261 reads, revealing 7796 differentially expressed genes (DEGs). We constructed a gene regulatory network with 59 hub genes, identified 6783 transcription factors and uncovered 88,424 putative markers, including 17,236 simple‐sequence repeats (SSRs), 10,099 single‐nucleotide polymorphisms (SNPs) and 78,332 indels. Notably, the majority of DEGs were upregulated at 24 hpi in the resistant genotype, encompassing diverse functional categories such as pathogenesis‐related genes, defence‐related (R) genes, genes involved in plant–fungus interactions, oxidation–reduction‐related genes, transport, metabolism and proteolysis genes, along with transcription factors (FAR1, B3, GATA, NAC, WRKY, MYBC1 and bHLH), secondary metabolic pathway‐related genes and photosynthesis‐related genes. The up‐regulation of WRKY transcripts, associated with the activation of the jasmonic acid defence signalling pathway, potentially induced systemic acquired resistance (SAR). Conversely, these DEGs exhibited down‐regulation in the susceptible genotype. Furthermore, a total of 17,236 expressed sequence tag (EST)‐SSRs were identified from the unigenes, holding significant potential for advancing plant breeding through marker‐assisted methods, facilitating quantitative trait locus (QTL) mapping and evaluating genetic diversity among genotypes. This study's approach contributes to a more profound understanding of the molecular‐level defence mechanisms involved in the interaction between groundnuts and S. rolfsii.
The scientific journey to eradicate smuts on the prairies
Authors: Aboukhaddour Reem , McCallum Brent D. , Menzies Jim , Hiebert Colin 
Published: August 2024

AbstractThe cultivation of wheat in North America represents a relatively recent endeavour, spanning a mere 150 years. This relatively brief period of its recent cultivation has allowed the opportunity to document the threats and diseases farmers had to face from the start. In this minireview, our primary objective is to provide a detailed exploration of the historical context on how we end up effectively managing what was once among the most destructive and hard to manage diseases affecting wheat, namely, common bunt (covered smut). This review delves into the early research efforts dedicated to understanding the biology of the causal pathogens and developing effective management approaches. These efforts encompass a wide spectrum of potential methods, ranging from seed treatments to cropping practices, and the development of genetic resistance. Throughout this exploration, we will also spotlight the remarkable scientific success story that has unfolded within the Canadian context. In essence, this review aims to provide a scientific examination of the history, challenges and innovative approaches associated with mitigating the impact of bunt pathogens on wheat cultivation in North America, and future challenges.
Spider mite infestation triggers coordinated hormonal trade‐offs enabling plant survival with a fitness cost
Authors: Garcia Alejandro , Talavera‐Mateo Lucia , Petrik Ivan , Oklestkova Jana , Novak Ondrej , Santamaria M. Estrella 
Published: August 2024

AbstractTetranychus urticae is an important pest that causes severe damage to a wide variety of plants and crops, leading to a substantial productivity loss. Previous research has been focused on plant defence response to T. urticae to improve plant resistance. However, plant growth, development and reproduction throughout the infestation process have not been previously studied. Through physiological, biochemical, transcriptomic and hormonomic evaluation, we uncover the molecular mechanisms directing the defence‐growth trade‐off established in Arabidopsis upon T. urticae infestation. Upon mite attack, plants suffer an adaptation process characterized by a temporal separation between the defence and growth responses. Jasmonic and salicylic acids regulate the main defence responses in combination with auxin and abscisic acid. However, while the reduction of both auxin signalling and gibberellin, cytokinin and brassinosteroid biosynthesis lead to initial growth arrest, increasing levels of growth hormones at later stages enables growth restart. These alterations lead to a plant developmental delay that impacts both seed production and longevity. We demonstrate that coordinated trade‐offs determine plant adaptation and survival, revealing mite infestation has a long‐lasting effect negatively impacting seed viability. This study provides additional tools to design pest management strategies that improve resistance without penalty in plant fitness.