bluuebunny/crossref_metadata_2025_split huggingface dataset:
Region and species dependent mechanical properties of adolescent and young adult brain tissue
Authors: MacManus David B. , Pierrat Baptiste , Murphy Jeremiah G. , Gilchrist Michael D. 
Published: October 2017

AbstractTraumatic brain injuries, the leading cause of death and disability in children and young adults, are the result of a rapid acceleration or impact of the head. In recent years, a global effort to better understand the biomechanics of TBI has been undertaken, with many laboratories creating detailed computational models of the head and brain. For these models to produce realistic results they require accurate regional constitutive data for brain tissue. However, there are large differences in the mechanical properties reported in the literature. These differences are likely due to experimental parameters such as specimen age, brain region, species, test protocols, and fiber direction which are often not reported. Furthermore, there is a dearth of reported viscoelastic properties for brain tissue at large-strain and high rates. Mouse, rat, and pig brains are impacted at 10/s to a strain of ~36% using a custom-built micro-indenter with a 125 μm radius. It is shown that the resultant mechanical properties are dependent on specimen-age, species, and region, under identical experimental parameters.
Zero-dc-field rotation-direction-dependent magnetization switching induced by a circularly polarized microwave magnetic field
Authors: Suto Hirofumi , Kanao Taro , Nagasawa Tazumi , Mizushima Koichi , Sato Rie 
Published: October 2017

AbstractMagnetization switching of high-anisotropy nanomagnets by a small magnetic field is a key challenge in developing future magnetic nanodevices. In this paper, we experimentally demonstrate magnetization switching of a perpendicularly magnetized nanomagnet induced solely by an in-plane circularly polarized microwave magnetic field. Applying a microwave field with an amplitude below 5% of the anisotropy field induces large ferromagnetic resonance excitation, which results in magnetization switching even in the absence of a dc field. This kind of magnetization switching is induced by a microwave field with a duration of 0.5 ns and is clearly dependent on the rotation direction of the microwave field.
Precision of a new ocular biometer in eyes with cataract using swept source optical coherence tomography combined with Placido-disk corneal topography
Authors: Wang Wenwen , Miao Yaxin , Savini Giacomo , McAlinden Colm , Chen Hao , Hu Qingjie , Wang Qinmei , Huang Jinhai 
Published: October 2017

AbstractThe present study was to assess the precision (repeatability and reproducibility) of a new optical biometer (OA-2000, Tomey, Japan) based on swept-source optical coherence tomography (SS-OCT) and Placido disk topography in eyes with cataracts. Seventy-eight eyes from seventy-eight patients with cataracts were evaluated. Axial length (AL), anterior chamber depth (ACD), keratometry (K) over a 2.5 mm and 3.0 mm diameter, lens thickness (LT), central corneal thickness (CCT) and white-to-white (WTW) distance were measured by 2 skilled operators. OA-2000 measurements were highly repeatable and reproducible for all parameters (intraclass correlation, 0.925 to 1.000). OA-2000 derived K-values with a diameter of 3.0mm showed narrower 95% limits of agreement (LoA) (SRK/T: −0.18 to 0.16D; Holladay 1: −0.20 to 0.19D; Hoffer Q: −0.22 to 0.20D) than those with a diameter of 2.5 mm for IOL power calculations (SRK/T: −0.20 to 0.20D; Holladay 1: −0.23 to 0.23D; Hoffer Q: −0.25 to 0.25D). The precision (repeatability and reproducibility) of the OA-2000 was excellent for all parameters. The 3.0mm diameter K-readings appear to be the most reliable choice for calculation of IOL power with the OA-2000. In addition, the average values determined from each operator’s 3 consecutive readings were more reproducible.
Conformational effects of N-glycan core fucosylation of immunoglobulin G Fc region on its interaction with Fcγ receptor IIIa
Authors: Sakae Yoshitake , Satoh Tadashi , Yagi Hirokazu , Yanaka Saeko , Yamaguchi Takumi , Isoda Yuya , Iida Shigeru , Okamoto Yuko , Kato Koichi 
Published: October 2017

AbstractAntibody-dependent cellular cytotoxicity (ADCC) is promoted through interaction between the Fc region of immunoglobulin G1 (IgG1) and Fcγ receptor IIIa (FcγRIIIa), depending on N-glycosylation of these glycoproteins. In particular, core fucosylation of IgG1-Fc N-glycans negatively affects this interaction and thereby compromises ADCC activity. To address the mechanisms of this effect, we performed replica-exchange molecular dynamics simulations based on crystallographic analysis of a soluble form of FcγRIIIa (sFcγRIIIa) in complex with IgG1-Fc. Our simulation highlights increased conformational fluctuation of the N-glycan at Asn162 of sFcγRIIIa upon fucosylation of IgG1-Fc, consistent with crystallographic data giving no interpretable electron density for this N-glycan, except for the innermost part. The fucose residue disrupts optimum intermolecular carbohydrate-carbohydrate interactions, rendering this sFcγRIIIa glycan distal from the Fc glycan. Moreover, our simulation demonstrates that core fucosylation of IgG1-Fc affects conformational dynamics and rearrangements of surrounding amino acid residues, typified by Tyr296 of IgG1-Fc, which was more extensively involved in the interaction with sFcγRIIIa without Fc core fucosylation. Our findings offer a structural foundation for designing and developing therapeutic antibodies with improved ADCC activity.
Differential effects of speech situations on mothers’ and fathers’ infant-directed and dog-directed speech: An acoustic analysis
Authors: Gergely Anna , Faragó Tamás , Galambos Ágoston , Topál József 
Published: October 2017

AbstractThere is growing evidence that dog-directed and infant-directed speech have similar acoustic characteristics, like high overall pitch, wide pitch range, and attention-getting devices. However, it is still unclear whether dog- and infant-directed speech have gender or context-dependent acoustic features. In the present study, we collected comparable infant-, dog-, and adult directed speech samples (IDS, DDS, and ADS) in four different speech situations (Storytelling, Task solving, Teaching, and Fixed sentences situations); we obtained the samples from parents whose infants were younger than 30 months of age and also had pet dog at home. We found that ADS was different from IDS and DDS, independently of the speakers’ gender and the given situation. Higher overall pitch in DDS than in IDS during free situations was also found. Our results show that both parents hyperarticulate their vowels when talking to children but not when addressing dogs: this result is consistent with the goal of hyperspeech in language tutoring. Mothers, however, exaggerate their vowels for their infants under 18 months more than fathers do. Our findings suggest that IDS and DDS have context-dependent features and support the notion that people adapt their prosodic features to the acoustic preferences and emotional needs of their audience.
Increased HSP27 correlates with malignant biological behavior of non-small cell lung cancer and predicts patient’s survival
Authors: Sheng Baowei , Qi Congcong , Liu Bing , Lin Yong , Fu Tian , Zeng Qingdi 
Published: October 2017

AbstractHeat shock protein 27 (HSP27) has been found to be related to tumorigenesis. The aim of this study was to investigate the expression pattern and clinical significance of HSP27 in non-small-cell lung cancer (NSCLC). The expression of HSP27 in tissues was examined by immunohistochemistry and serum level of HSP27 mRNA was detected by real-time PCR. The survival analysis was performed by a Kaplan Meier method and the estimation of risk factors was determined by the multiple regression analysis. The expression of HSP27 was increased in lung cancer tissues (p < 0.001) and serum (p < 0.001) of NSCLC patients and higher HSP27 in lung cancer tissues and serum of NSCLC patients was associated with poorly differentiated cancer (p < 0.001; p = 0.035), lymphatic metastasis (p < 0.001; p < 0.001), advanced TNM stage (p < 0.001; p < 0.001). And the levels of HSP27 in tissues and serum of lung cancer patients had a certain positive correlation (p = 0.046). Moreover, increased HSP27 expression correlated with shorter survival of NSCLC patients (p < 0.001). The results suggest that HSP27 may serve as a potential biomarker for diagnosis and prognosis of NSCLC.
Phenotypic Innovation and Adaptive Constraints in the Evolutionary Radiation of Palaeozoic Crinoids
Authors: Wright David F. 
Published: October 2017

AbstractTo better understand the patterns and processes shaping large-scale phenotypic diversification, I integrate palaeobiological and phylogenetic perspectives to investigate a ~200-million-year radiation using a global sample of Palaeozoic crinoid echinoderms. Results indicate the early history of crinoid diversification is characterized by early burst dynamics with decelerating morphologic rates. However, in contrast with expectation for a single “early burst” model, morphospace continued to expand following a slowdown in rates. In addition, I find evidence for an isolated peak in morphologic rates occurring late in the clade’s history. This episode of elevated rates is not associated with increased disparity, morphologic novelty, or the radiation of a single subclade. Instead, this episode of elevated rates involved multiple subclade radiations driven by environmental change toward a pre-existing adaptive optimum. The decoupling of morphologic disparity with rates of change suggests phenotypic rates are primarily shaped by ecologic factors rather than the origination of morphologic novelty alone. These results suggest phenotypic diversification is far more complex than models commonly assumed in comparative biology. Furthermore, palaeontological disparity patterns are not a reliable proxy for rates after an initial diversifying phase. These issues highlight the need for continued synthesis between fossil and phylogenetic approaches to macroevolution.
Health impact of E-cigarettes: a prospective 3.5-year study of regular daily users who have never smoked
Authors: Polosa Riccardo , Cibella Fabio , Caponnetto Pasquale , Maglia Marilena , Prosperini Umberto , Russo Cristina , Tashkin Donald 
Published: October 2017

AbstractAlthough electronic cigarettes (ECs) are a much less harmful alternative to tobacco cigarettes, there is concern as to whether long-term ECs use may cause risks to human health. We report health outcomes (blood pressure, heart rate, body weight, lung function, respiratory symptoms, exhaled breath nitric oxide [eNO], exhaled carbon monoxide [eCO], and high-resolution computed tomography [HRCT] of the lungs) from a prospective 3.5-year observational study of a cohort of nine daily EC users (mean age 29.7 (±6.1) years) who have never smoked and a reference group of twelve never smokers. No significant changes could be detected over the observation period from baseline in the EC users or between EC users and control subjects in any of the health outcomes investigated. Moreover, no pathological findings could be identified on HRCT of the lungs and no respiratory symptoms were consistently reported in the EC user group. Although it cannot be excluded that some harm may occur at later stages, this study did not demonstrate any health concerns associated with long-term use of EC in relatively young users who did not also smoke tobacco.
The space of genotypes is a network of networks: implications for evolutionary and extinction dynamics
Authors: Yubero Pablo , Manrubia Susanna , Aguirre Jacobo 
Published: October 2017

AbstractThe forcing that environmental variation exerts on populations causes continuous changes with only two possible evolutionary outcomes: adaptation or extinction. Here we address this topic by studying the transient dynamics of populations on complex fitness landscapes. There are three important features of realistic landscapes of relevance in the evolutionary process: fitness landscapes are rough but correlated, their fitness values depend on the current environment, and many (often most) genotypes do not yield viable phenotypes. We capture these properties by defining time-varying, holey, NK fitness landscapes. We show that the structure of the space of genotypes so generated is that of a network of networks: in a sufficiently holey landscape, populations are temporarily stuck in local networks of genotypes. Sudden jumps to neighbouring networks through narrow adaptive pathways (connector links) are possible, though strong enough local trapping may also cause decays in population growth and eventual extinction. A combination of analytical and numerical techniques to characterize complex networks and population dynamics on such networks permits to derive several quantitative relationships between the topology of the space of genotypes and the fate of evolving populations.
A Brain Penetrant Mutant IDH1 Inhibitor Provides In Vivo Survival Benefit
Authors: Kopinja Johnny , Sevilla Raquel S. , Levitan Diane , Dai David , Vanko Amy , Spooner Edward , Ware Chris , Forget Robert , Hu Kun , Kral Astrid , Spacciapoli Peter , Kennan Richard , Jayaraman Lata , Pucci Vincenzo , Perera Samanthi , Zhang Weisheng , Fischer Christian , Lam Michael H. 
Published: October 2017

AbstractMutations in IDH1 are highly prevalent in human glioma. First line treatment is radiotherapy, which many patients often forego to avoid treatment-associated morbidities. The high prevalence of IDH1 mutations in glioma highlights the need for brain-penetrant IDH1 mutant-selective inhibitors as an alternative therapeutic option. Here, we have explored the utility of such an inhibitor in IDH1 mutant patient-derived models to assess the potential therapeutic benefits associated with intracranial 2-HG inhibition. Treatment of mutant IDH1 cell line models led to a decrease in intracellular 2-HG levels both in vitro and in vivo. Interestingly, inhibition of 2-HG production had no effect on in vitro IDH1 mutant glioma cell proliferation. In contrast, IDH1 mutant-selective inhibitors provided considerable survival benefit in vivo. However, even with near complete inhibition of intratumoral 2-HG production, not all mutant glioma models responded to treatment. The results suggest that disruption of 2-HG production with brain-penetrant inhibitors in IDH1 mutant gliomas may have substantial patient benefit.
CCN3 is a therapeutic target relating enhanced stemness and coagulation in hepatocellular carcinoma
Authors: Jia Qingan , Xue Tongchun , Zhang Qiangbo , Cheng Wei , Zhang Chun , Ma Jingwei , Bu Yang , Yu Songning , Liu Qingguang 
Published: October 2017

AbstractThe general prognosis of patients with hepatocellular carcinoma (HCC) remains extremely dismal, due to the high frequency of metastasis. Since 2003, our research group has explored the gene expression profiles of metastasized HCC tissue samples and identified a significant upregulation of CCN3. However, the role and precise pathological function of CCN3 remains elusive. We showed that CCN3 is associated with the poor prognosis of patients with HCC, the malignant phenotype of HCC, and vascular thrombosis. We further evaluated the negative roles of CCN3 in vitro and in vivo, and identified osteopontin (OPN), and coagulation factors tissue factor (TF) and thrombin as the leading genes downstream of CCN3, that are positively associated with HCC cell stemness. We demonstrated that overexpressed CCN3 in HCC cells leads to enhanced survival and increased number of pulmonary metastases in vivo. The elevated levels of OPN and TF were associated with signal activation of nuclear factor κB (NFκB) and extracellular signal-regulated kinases (ERK). Our findings suggest CCN3 is a potential therapeutic target that would affect the upregulation of OPN and coagulation factors, which would lead to an enhanced stemness and blood coagulation microenvironment in HCC tissue.
Combined TDDFT and AIM Insights into Photoinduced Excited State Intramolecular Proton Transfer (ESIPT) Mechanism in Hydroxyl- and Amino-Anthraquinone Solution
Authors: Zheng Daoyuan , Zhang Mingzhen , Zhao Guangjiu 
Published: October 2017

AbstractTime-dependent density functional theory (TDDFT) and atoms in molecules (AIM) theory are combined to study the photoinduced excited state intramolecular proton transfer (ESIPT) dynamics for eight anthraquinones (AQs) derivatives in solution. The calculated absorption and emission spectra are consistent with the available experimental data, verifying the suitability of the theory selected. The systems with the excited-state exothermic proton transfer, such as 1-HAQ, 1,5-DHAQ and TFAQ, emit completely from transfer structure (T), while the reactions for those without ESIPT including 1,4-DHAQ and AAAQ appear to be endothermic. Three reaction properties of three systems (1,8-DHAQ, DCAQ and CAAQ) are between the exothermic and endothermic, sensitive to the solvent. Energy scanning shows that 1,4-DHAQ and AAAQ exhibit the higher ESIPT energy barriers compared to 1-HAQ, 1,5-DHAQ and TFAQ with the “barrierless” ESIPT process. The ESIPT process is facilitated by the strengthening of hydrogen bonds in excited state. With AIM theory, it is observed that the change in electrons density ρ(r) and potential energy density V(r) at BCP position between ground state and excited state are crucial factors to quantitatively elucidate the ESIPT.
A single extracellular amino acid in Free Fatty Acid Receptor 2 defines antagonist species selectivity and G protein selection bias
Authors: Sergeev Eugenia , Hansen Anders Højgaard , Bolognini Daniele , Kawakami Kouki , Kishi Takayuki , Aoki Junken , Ulven Trond , Inoue Asuka , Hudson Brian D. , Milligan Graeme 
Published: October 2017

AbstractFree Fatty Acid Receptor 2 is a GPCR activated by short chain fatty acids produced in high levels in the lower gut by microbial fermentation of non-digestible carbohydrates. A major challenge in studying this receptor is that the mouse ortholog does not have significant affinity for antagonists that are able to block the human receptor. Docking of exemplar antagonists from two chemical series to homology models of both human and mouse Free Fatty Acid Receptor 2 suggested that a single lysine - arginine variation at the extracellular face of the receptor might provide the basis for antagonist selectivity and mutational swap studies confirmed this hypothesis. Extending these studies to agonist function indicated that although the lysine - arginine variation between human and mouse orthologs had limited effect on G protein-mediated signal transduction, removal of positive charge from this residue produced a signalling-biased variant of Free Fatty Acid Receptor 2 in which Gi-mediated signalling by both short chain fatty acids and synthetic agonists was maintained whilst there was marked loss of agonist potency for signalling via Gq/11 and G12/13 G proteins. A single residue at the extracellular face of the receptor thus plays key roles in both agonist and antagonist function.
Ionic liquid-based dispersive liquid-liquid microextraction combined with functionalized magnetic nanoparticle solid-phase extraction for determination of industrial dyes in water
Authors: Liang Ning , Hou Xiaohong , Huang Peiting , Jiang Chao , Chen Lijuan , Zhao Longshan 
Published: October 2017

AbstractN-butyl pyridinium bis((trifluoromethyl)sulfonyl)imide ([Hpy]NTf2) functionalized core/shell magnetic nanoparticles (MNPs, Fe3O4@SiO2@[Hpy]NTf2)) were prepared and applied as an adsorbent for magnetic solid phase extraction (MSPE) of three commonly used industrial dyes including malachite green, crystal violet and methylene blue. Extraction solution was mixed with 100 mg extraction material of Fe3O4@SiO2@[Hpy]NTf2, and 1 mL of acetonitrile was used to elute target analytes for further extraction and purification. [Hpy]NTf2 was used as extraction solution, and 500 μL methanol was selected as dispersive solvent in ionic liquid (IL) dispersive liquid–liquid microextraction (DLLME) method. After sonication for 5 min and centrifugation at 447 g for 10 min, 20 μL of sedimented phase was injected into HPLC-UV system. The limit of detection (LOD) and limit of quantification (LOQ) of current method were 0.03 and 0.16 μg·L−1, respectively, which indicated the sensitivity was comparable or even superior to other reported methods. The relative recoveries of the target analytes ranged from 86.1% to 100.3% with relative standard deviations between 0.3% and 4.5%. The developed method has been successfully applied to determine the level of three industrial dyes in different water samples.
Maternal Glucocorticoid Elevation and Associated Fetal Thymocyte Apoptosis are Involved in Immune Disorders of Prenatal Caffeine Exposed Offspring Mice
Authors: Liu Han-xiao , Chen Ting , Wen Xiao , Qu Wen , Liu Sha , Yan Hui-yi , Hou Li-fang , Ping Jie 
Published: October 2017

AbstractOur previous study showed that prenatal caffeine exposure (PCE) could induce intrauterine growth retardation (IUGR) and glucocorticoid elevation in the fetus. Researchers suggested that IUGR is a risk factor for T helper cell (Th)1/Th2 deviation. However, whether PCE can induce these immune disorders and the underlying mechanisms of that induction remain unknown. This study aimed to observe the effects of PCE on the Th1/Th2 balance in offspring and further explore the developmental origin mechanisms from the perspective of glucocorticoid overexposure-induced thymocyte apoptosis. An IUGR model was established by caffeine administration from gestational day (GD) 9 to GD 18, and the offspring were immunized on postnatal day (PND) 42. The results show that maternal glucocorticoid overexposure increased fetal thymocyte apoptosis by activating both the Fas-mediated and the Bim-regulated apoptotic pathways. After birth, accelerated thymocyte apoptosis and Th1 suppression were also found in the PCE offspring at PND 14 and PND 49. Moreover, the PCE offspring showed immune disorders after immunization, manifesting as increased IgG1/IgG2a ratio and IL-4 production in the serum. In conclusion, PCE could induce fetal overexposure to maternal glucocorticoids and increase thymocyte apoptosis, which could persist into postnatal life and be implicated in Th1 inhibition and further immune disorders.
The Subpolar North Atlantic Ocean Heat Content Variability and its Decomposition
Authors: Zhang Weiwei , Yan Xiao-Hai 
Published: October 2017

AbstractThe Subpolar North Atlantic (SPNA) is one of the most important areas to global climate because its ocean heat content (OHC) is highly correlated with the Atlantic Meridional Overturning Circulation (AMOC), and its circulation strength affects the salt transport by the AMOC, which in turn feeds and sustains the strength of the AMOC. Moreover, the recent global surface warming “hiatus” may be attributed to the SPNA as one of the major planetary heat sinks. Although almost synchronized before 1996, the OHC has greater spatial disparities afterwards, which cannot be explained as driven by the North Atlantic Oscillation (NAO). Temperature decomposition reveals that the western SPNA OHC is mainly determined by the along isopycnal changes, while in the eastern SPNA along isopycnal changes and isopycnal undulation are both important. Further analysis indicates that heat flux dominates the western SPNA OHC, but in the eastern SPNA wind forcing affects the OHC significantly. It is worth noting that the along isopycnal OHC changes can also induce heaving, thus the observed heaving domination in global oceans cannot mask the extra heat in the ocean during the recent “hiatus”.