bluuebunny/crossref_metadata_2025_split huggingface dataset:
Materials and corrosion trends in offshore and subsea oil and gas production
Authors: Iannuzzi Mariano , Barnoush Afrooz , Johnsen Roy 
Published: July 2017

AbstractThe ever-growing energy demand requires the exploration and the safe, profitable exploitation of unconventional reserves. The extreme environments of some of these unique prospects challenge the boundaries of traditional engineering alloys, as well as our understanding of the underlying degradation mechanisms that could lead to a failure. Despite their complexity, high-pressure and high-temperature, deep and ultra-deep, pre-salt, and Arctic reservoirs represent the most important source of innovation regarding materials technology, design methodologies, and corrosion control strategies. This paper provides an overview of trends in materials and corrosion research and development, with focus on subsea production but applicable to the entire industry. Emphasis is given to environmentally assisted cracking of high strength alloys and advanced characterization techniques based on in situ electrochemical nanoindentation and cantilever bending testing for the study of microstructure-environment interactions.
Effects of testosterone and flutamide on reproduction in Brachionus calyciflorus
Authors: Tian Jian , Liu Lulu , Han Yajie , Yang Yuanhao , Jin Sichen , Yang Jiaxin 
Published: July 2017

AbstractThe effects of testosterone and flutamide on reproduction in Brachionus calyciflorus were studied. Asexual reproduction in B. calyciflorus was not affected by testosterone at different concentrations of flutamide. Flutamide in combination with 0, 25, 50, or 75 µg L−1 testosterone had a significant effect on mixis rate. The combination of 5 µg L−1 flutamide with 25 µg L−1 or 50 µg L−1 testosterone resulted in a mixis rate that was 2.2× lower than that with flutamide alone. Fertilization rate was significantly decreased by 7.5 µg L−1 flutamide in combination with 25, 50, or 75 µg L−1 testosterone. The number of resting eggs produced per mictic female was significantly lower at all concentrations of testosterone. A low concentration of flutamide in combination with testosterone resulted in antagonism, increasing the number of resting eggs produced. However, when testosterone was combined with a higher concentration of flutamide, resting egg production declined. Therefore, long-term exposure to either testosterone, flutamide, or a combination of these two compounds may significantly reduce resting egg production in rotifers. This implies that resting egg production is affected differently by hormone pathways.
Modification of the contact surfaces for improving the puncture resistance of laminar structures
Authors: Wang Pengfei , Yang Jinglei , Li Xin , Liu Mao , Zhang Xin , Sun Dawei , Bao Chenlu , Gao Guangfa , Yahya Mohd Yazid , Xu Songlin 
Published: July 2017

AbstractUncovering energy absorption and surface effects of various penetrating velocities on laminar structures is essential for designing protective structures. In this study, both quasi-static and dynamic penetration tests were systematical conducted on the front surfaces of metal sheets coated with a graphene oxide (GO) solution and other media. The addition of a GO fluid film to the front impact surface aided in increasing the penetration strength, improving the failure extension and dissipating additional energy under a wide-range of indentation velocity, from 3.33 × 10−5 m/s to 4.42 m/s. The coated -surfaces improved the specific energy dissipation by approximately 15~40% relative to the dry-contact configuration for both single-layer and double-layer configurations, and specific energy dissipations of double-layer configurations were 20~30% higher than those of the single-layer configurations. This treatment provides a facile strategy in changing the contact state for improving the failure load and dissipate additional energy.
Metacognitive impairments extend perceptual decision making weaknesses in compulsivity
Authors: Hauser Tobias U. , Allen Micah ,   NSPN Consortium, Bullmore Edward T. , Goodyer Ian , Fonagy Peter , Jones Peter , Fearon Pasco , Prabhu Gita , Moutoussis Michael , St Clair Michelle , Cleridou Kalia , Dadabhoy Hina , Granville Sian , Harding Elizabeth , Hopkins Alexandra , Isaacs Daniel , King Janchai , Kokorikou Danae , Mills Harriet , Pantaleone Sara , Rees Geraint , Dolan Raymond J. 
Published: July 2017

AbstractAwareness of one’s own abilities is of paramount importance in adaptive decision making. Psychotherapeutic theories assume such metacognitive insight is impaired in compulsivity, though this is supported by scant empirical evidence. In this study, we investigate metacognitive abilities in compulsive participants using computational models, where these enable a segregation between metacognitive and perceptual decision making impairments. We examined twenty low-compulsive and twenty high-compulsive participants, recruited from a large population-based sample, and matched for other psychiatric and cognitive dimensions. Hierarchical computational modelling of the participants’ metacognitive abilities on a visual global motion detection paradigm revealed that high-compulsive participants had a reduced metacognitive ability. This impairment was accompanied by a perceptual decision making deficit whereby motion-related evidence was accumulated more slowly in high compulsive participants. Our study shows that the compulsivity spectrum is associated with a reduced ability to monitor one’s own performance, over and above any perceptual decision making difficulties.
Evolution of Phase, Microstructure and ZrC Lattice Parameter in Solid-solution-treated W-ZrC Composite
Authors: Jia Peng , Chen Lei , Rao Jiancun , Wang Yujin , Meng Qingchang , Zhou Yu 
Published: July 2017

AbstractZirconium carbide (ZrC) reinforced tungsten (W) composite was hot-pressed at 2200 °C for 1 h in vacuum, which was subsequently heat treated in the temperature range of 2200 to 2500 °C for 1.5 or 2 h. The relative ratios of ZrC phase were 21.0, 23.3 and 25.9 mol.% for the mixture of starting powders, composites sintered for 1 h and solid-solution treated at 2500 °C for 1.5 h, respectively. The solid solubility of W in ZrC increased with the increment in heat-treating temperature and time to a maximum value of 18.9 mol.% at 2500 °C for 1.5 h. The lattice parameter of cubic ZrC phase diminished from 0.4682 nm in the starting powder to 0.4642 nm in the solid-solution composite treated at 2500 °C for 1.5 h. This work demonstrated that the relationship between the solid solubility of W in ZrC and the lattice parameter of ZrC is linear, with a slope of −1.93 × 10−4 nm/at.%. Overall, more W atoms diffused into ZrC lattice after heat treatment, meanwhile, the previous precipitated nano-sized W dissolved in the supersaturated (Zr,W)C solid-solution, as detected by SEM and TEM.
Comprehensive analysis of human protein N-termini enables assessment of various protein forms
Authors: Yeom Jeonghun , Ju Shinyeong , Choi YunJin , Paek Eunok , Lee Cheolju 
Published: July 2017

AbstractVarious forms of protein (proteoforms) are generated by genetic variations, alternative splicing, alternative translation initiation, co- or post-translational modification and proteolysis. Different proteoforms are in part discovered by characterizing their N-terminal sequences. Here, we introduce an N-terminal-peptide-enrichment method, Nrich. Filter-aided negative selection formed the basis for the use of two N-blocking reagents and two endoproteases in this method. We identified 6,525 acetylated (or partially acetylated) and 6,570 free protein N-termini arising from 5,727 proteins in HEK293T human cells. The protein N-termini included translation initiation sites annotated in the UniProtKB database, putative alternative translational initiation sites, and N-terminal sites exposed after signal/transit/pro-peptide removal or unknown processing, revealing various proteoforms in cells. In addition, 46 novel protein N-termini were identified in 5′ untranslated region (UTR) sequence with pseudo start codons. Our data showing the observation of N-terminal sequences of mature proteins constitutes a useful resource that may provide information for a better understanding of various proteoforms in cells.
The regulation of Hh/Gli1 signaling cascade involves Gsk3β- mediated mechanism in estrogen-derived endometrial hyperplasia
Authors: Kaushal Jyoti Bala , Sankhwar Pushplata , Kumari Suparna , Popli Pooja , Shukla Vinay , Hussain Mohd. Kamil , Hajela Kanchan , Dwivedi Anila 
Published: July 2017

AbstractThe present study was undertaken to explore the functional involvement of Hh signaling and its regulatory mechanism in endometrial hyperplasia. Differential expression of Hh signaling molecules i.e., Ihh, Shh, Gli1 or Gsk3β was observed in endometrial hyperplasial (EH) cells as compared to normal endometrial cells. Estradiol induced the expression of Hh signaling molecules and attenuated the expression of Gsk3β whereas anti-estrogen (K1) or progestin (MPA) suppressed these effects in EH cells. Cyclopamine treatment or Gli1 siRNA knockdown suppressed the growth of EH cells and reduced the expression of proliferative markers. Estradiol also induced the nuclear translocation of Gli1 which was suppressed by both MPA and K1 in EH cells. While exploring non-canonical mechanism, LY-294002 (Gsk3β activator) caused a decrease in Gli1 expression indicating the involvement of Gsk3β in Gli1 regulation. Further, Gsk3β silencing promoted the expression and nuclear translocation of Gli1 demonstrating that Gsk3β serves as a negative kinase regulator of Gli1 in EH cells. Similar attenuation of Hh signaling molecules was observed in rats with uterine hyperplasia undergoing anti-estrogen treatment. The study suggested that Hh/Gli1 cascade (canonical pathway) as well as Gsk3β-Gli1 crosstalk (non-canonical pathway) play crucial role in estrogen-dependent cell proliferation in endometrial hyperplasia.
Structural and physical determinants of the proboscis–sucking pump complex in the evolution of fluid-feeding insects
Authors: Kornev Konstantin G. , Salamatin Arthur A. , Adler Peter H. , Beard Charles E. 
Published: July 2017

AbstractFluid-feeding insects have evolved a unique strategy to distribute the labor between a liquid-acquisition device (proboscis) and a sucking pump. We theoretically examined physical constraints associated with coupling of the proboscis and sucking pump into a united functional organ. Classification of fluid feeders with respect to the mechanism of energy dissipation is given by using only two dimensionless parameters that depend on the length and diameter of the proboscis food canal, maximum expansion of the sucking pump chamber, and chamber size. Five species of Lepidoptera — White-headed prominent moth (Symmerista albifrons), White-dotted prominent moth (Nadata gibosa), Monarch butterfly (Danaus plexippus), Carolina sphinx moth (Manduca sexta), and Death’s head sphinx moth (Acherontia atropos) — were used to illustrate this classification. The results provide a rationale for categorizing fluid-feeding insects into two groups, depending on whether muscular energy is spent on moving fluid through the proboscis or through the pump. These findings are relevant to understanding energetic costs of evolutionary elaboration and reduction of the mouthparts and insect diversification through development of new habits by fluid-feeding insects in general and by Lepidoptera in particular.
Hybrid High-order Functional Connectivity Networks Using Resting-state Functional MRI for Mild Cognitive Impairment Diagnosis
Authors: Zhang Yu , Zhang Han , Chen Xiaobo , Lee Seong-Whan , Shen Dinggang 
Published: July 2017

AbstractConventional functional connectivity (FC), referred to as low-order FC, estimates temporal correlation of the resting-state functional magnetic resonance imaging (rs-fMRI) time series between any pair of brain regions, simply ignoring the potentially high-level relationship among these brain regions. A high-order FC based on “correlation’s correlation” has emerged as a new approach for abnormality detection of brain disease. However, separate construction of the low- and high-order FC networks overlooks information exchange between the two FC levels. Such a higher-level relationship could be more important for brain diseases study. In this paper, we propose a novel framework, namely “hybrid high-order FC networks” by exploiting the higher-level dynamic interaction among brain regions for early mild cognitive impairment (eMCI) diagnosis. For each sliding window-based rs-fMRI sub-series, we construct a whole-brain associated high-order network, by estimating the correlations between the topographical information of the high-order FC sub-network from one brain region and that of the low-order FC sub-network from another brain region. With multi-kernel learning, complementary features from multiple time-varying FC networks constructed at different levels are fused for eMCI classification. Compared with other state-of-the-art methods, the proposed framework achieves superior diagnosis accuracy, and hence could be promising for understanding pathological changes of brain connectome.
The anti-cancer effects of itraconazole in epithelial ovarian cancer
Authors: Choi Chel Hun , Ryu Ji-Yoon , Cho Young-Jae , Jeon Hye-Kyung , Choi Jung-Joo , Ylaya Kris , Lee Yoo-Young , Kim Tae-Joong , Chung Joon-Yong , Hewitt Stephen M. , Kim Byoung-Gie , Bae Duk-Soo , Lee Jeong-Won 
Published: July 2017

AbstractWe assessed the anti-proliferative activity of itraconazole using an EOC cell line (SKOV3ip1) and endothelial cell lines (HUVEC & SVEC4-10). We also examined angiogenesis (VEGFR2, p-ERK, p-PLCr1/2), hedgehog (Gli1, Ptch1, SMO), and mTOR (pS6K1) signaling pathways to determine the mechanism of action of itraconazole. Furthermore, we evaluated the synergistic effects of itraconazole and paclitaxel using orthotopic mouse models with established EOC cells (SKOV3ip1 or HeyA8) as well as patient-derived xenografts (PDXs). Itraconazole treatment inhibited proliferation of endothelial cells in a dose-dependent manner, but had no effect on EOC cells. The endothelial cell antiproliferative effect was associated with inhibition of hedgehog, and mTOR pathways and angiogenesis. In xenograft models of EOC using SKOV3ip1 or HeyA8, mice treated with the combination of itraconazole and paclitaxel had significantly decreased tumor weight than the control, paclitaxel-alone, or itraconazole-alone groups. Tissue derived from these tumors had significantly lower microvessel density than tissue from the other groups as well as hedgehog and mTOR pathway inhibition. We confirmed those effects in two EOC PDX models. These results suggest that itraconazole selectively inhibits endothelial cells rather than cancer cells by targeting multiple pathways including hedgehog, and mTOR pathways and angiogenesis.
Predicting the functional consequences of non-synonymous single nucleotide polymorphisms in IL8 gene
Authors: Dakal Tikam Chand , Kala Deepak , Dhiman Gourav , Yadav Vinod , Krokhotin Andrey , Dokholyan Nikolay V. 
Published: July 2017

AbstractHere we report anin-silicoapproach for identification, characterization and validation of deleterious non-synonymous SNPs (nsSNPs) in the interleukin-8 gene using three steps. In first step, sequence homology-based genetic analysis of a set of 50 coding SNPs associated with 41 rsIDs using SIFT (Sorting Intolerant from Tolerant) and PROVEAN (Protein Variation Effect Analyzer) identified 23 nsSNPs to be putatively damaging/deleterious in at least one of the two tools used. Subsequently, structure-homology based PolyPhen-2 (Polymorphism Phenotyping) analysis predicted 9 of 23 nsSNPs (K4T, E31A, E31K, S41Y, I55N, P59L, P59S, L70P and V88D) to be damaging. According to the conditional hypothesis for the study, only nsSNPs that score damaging/deleterious prediction in both sequence and structural homology-based approach will be considered as ‘high-confidence’ nsSNPs. In step 2, based on conservation of amino acid residues, stability analysis, structural superimposition, RSMD and docking analysis, the possible structural-functional relationship was ascertained for high-confidence nsSNPs. Finally, in a separate analysis (step 3), the IL-8 deregulation has also appeared to be an important prognostic marker for detection of patients with gastric and lung cancer. This study, for the first time, provided in-depth insights on the effects of amino acid substitutions on IL-8 protein structure, function and disease association.
Mid-infrared femtosecond laser-induced damages in As2S3 and As2Se3 chalcogenide glasses
Authors: You Chenyang , Dai Shixun , Zhang Peiqing , Xu Yinsheng , Wang Yingying , Xu Dong , Wang Rongping 
Published: July 2017

AbstractIn this paper, we report the first measurements of mid-infrared (MIR) femtosecond laser-induced damage in two typical chalcogenide glasses, As2S3 and As2Se3. Damage mechanism is studied via optical microscopy, scanning electron microscopy and elemental analysis. By irradiating at 3, 4 and 5 μm with 150 fs ultrashort pulses, the evolution of crater features is presented with increasing laser fluence. The dependence of laser damage on the bandgap and wavelength is investigated and finally the laser-induced damage thresholds (LIDTs) of As2S3 and As2Se3 at 3 and 4 μm are calculated from the experimental data. The results may be a useful for chalcogenide glasses (ChGs) applied in large laser instruments to prevent optical damage.
Major histocompatibility complex genes partly explain early survival in house sparrows
Authors: Lukasch B. , Westerdahl H. , Strandh M. , Knauer F. , Winkler H. , Moodley Y. , Hoi H. 
Published: July 2017

AbstractEnvironmental factors and genetic incompatibilities between parents have been suggested as important determinants for embryonic mortality and survival. The genetic set-up of the immune system, specifically the highly polymorphic major histocompatibility complex (MHC) may also influence individual resistance to infections. MHC proteins are important for an appropriate adaptive immune response and enable T-cells to separate ‘self’ from ‘non-self’. Here we investigate the importance of MHC functional diversity for early development in birds, more specifically, if offspring survival and body mass or size depends on number of different functional MHC alleles, specific functional MHC alleles or similarity of MHC alleles in the parents. Unhatched eggs are common in clutches of many bird species. In house sparrows (Passer domesticus), embryo and nestling mortality can exceed 50%. To control for environmental factors, our study was carried out on an aviary population. We found that one specific functional MHC allele was associated with reduced nestling survival, which was additionally supported by lower body mass and a smaller tarsus when nestlings have been 6 days old. Another allele was positively associated with tarsus length at a later nestling stage (nestlings 12 days old). These results indicate that MHC alleles might influence pathogen resistance or susceptibility.
Gambling-like behavior in pigeons: ‘jackpot’ signals promote maladaptive risky choice
Authors: Smith Aaron P. , Beckmann Joshua S. , Zentall Thomas R. 
Published: July 2017

AbstractIndividuals often face choices that have uncertain outcomes and have important consequences. As a model of this environment, laboratory experiments often offer a choice between an uncertain, large reward that varies in its probability of delivery against a certain but smaller reward as a measure of an individual’s risk aversion. An important factor generally lacking from these procedures are gambling related cues that may moderate risk preferences. The present experiment offered pigeons choices between unreliable and certain rewards but, for the Signaled group on winning choices, presented a ‘jackpot’ signal prior to reward delivery. The Unsignaled group received an ambiguous stimulus not informative of choice outcomes. For the Signaled group, presenting win signals effectively blocked value discounting for the large, uncertain outcome as the probability of a loss increased, whereas the Unsignaled group showed regular preference changes similar to previous research lacking gambling related cues. These maladaptive choices were further shown to be unaffected by more salient loss signals and resistant to response cost increases. The results suggest an important role of an individual’s sensitivity to outcome-correlated cues in influencing risky choices that may moderate gambling behaviors in humans, particularly in casino and other gambling-specific environments.
4-dimensional functional profiling in the convulsant-treated larval zebrafish brain
Authors: Winter Matthew J. , Windell Dylan , Metz Jeremy , Matthews Peter , Pinion Joe , Brown Jonathan T. , Hetheridge Malcolm J. , Ball Jonathan S. , Owen Stewart F. , Redfern Will S. , Moger Julian , Randall Andrew D. , Tyler Charles R. 
Published: July 2017

AbstractFunctional neuroimaging, using genetically-encoded Ca2+ sensors in larval zebrafish, offers a powerful combination of high spatiotemporal resolution and higher vertebrate relevance for quantitative neuropharmacological profiling. Here we use zebrafish larvae with pan-neuronal expression of GCaMP6s, combined with light sheet microscopy and a novel image processing pipeline, for the 4D profiling of chemoconvulsant action in multiple brain regions. In untreated larvae, regions associated with autonomic functionality, sensory processing and stress-responsiveness, consistently exhibited elevated spontaneous activity. The application of drugs targeting different convulsant mechanisms (4-Aminopyridine, Pentylenetetrazole, Pilocarpine and Strychnine) resulted in distinct spatiotemporal patterns of activity. These activity patterns showed some interesting parallels with what is known of the distribution of their respective molecular targets, but crucially also revealed system-wide neural circuit responses to stimulation or suppression. Drug concentration-response curves of neural activity were identified in a number of anatomically-defined zebrafish brain regions, and in vivo larval electrophysiology, also conducted in 4dpf larvae, provided additional measures of neural activity. Our quantification of network-wide chemoconvulsant drug activity in the whole zebrafish brain illustrates the power of this approach for neuropharmacological profiling in applications ranging from accelerating studies of drug safety and efficacy, to identifying pharmacologically-altered networks in zebrafish models of human neurological disorders.