bluuebunny/crossref_metadata_2025_split huggingface dataset:
High-quality photonic crystals with a nearly complete band gap obtained by direct inversion of woodpile templates with titanium dioxide
Authors: Marichy Catherine , Muller Nicolas , Froufe-Pérez Luis S. , Scheffold Frank 
Published: February 2016

AbstractPhotonic crystal materials are based on a periodic modulation of the dielectric constant on length scales comparable to the wavelength of light. These materials can exhibit photonic band gaps; frequency regions for which the propagation of electromagnetic radiation is forbidden due to the depletion of the density of states. In order to exhibit a full band gap, 3D PCs must present a threshold refractive index contrast that depends on the crystal structure. In the case of the so-called woodpile photonic crystals this threshold is comparably low, approximately 1.9 for the direct structure. Therefore direct or inverted woodpiles made of high refractive index materials like silicon, germanium or titanium dioxide are sought after. Here we show that, by combining multiphoton lithography and atomic layer deposition, we can achieve a direct inversion of polymer templates into TiO2 based photonic crystals. The obtained structures show remarkable optical properties in the near-infrared region with almost perfect specular reflectance, a transmission dip close to the detection limit and a Bragg length comparable to the lattice constant.
New strategy for drug discovery by large-scale association analysis of molecular networks of different species
Authors: Zhang Bo , Fu Yingxue , Huang Chao , Zheng Chunli , Wu Ziyin , Zhang Wenjuan , Yang Xiaoyan , Gong Fukai , Li Yuerong , Chen Xiaoyu , Gao Shuo , Chen Xuetong , Li Yan , Lu Aiping , Wang Yonghua 
Published: February 2016

AbstractThe development of modern omics technology has not significantly improved the efficiency of drug development. Rather precise and targeted drug discovery remains unsolved. Here a large-scale cross-species molecular network association (CSMNA) approach for targeted drug screening from natural sources is presented. The algorithm integrates molecular network omics data from humans and 267 plants and microbes, establishing the biological relationships between them and extracting evolutionarily convergent chemicals. This technique allows the researcher to assess targeted drugs for specific human diseases based on specific plant or microbe pathways. In a perspective validation, connections between the plant Halliwell-Asada (HA) cycle and the human Nrf2-ARE pathway were verified and the manner by which the HA cycle molecules act on the human Nrf2-ARE pathway as antioxidants was determined. This shows the potential applicability of this approach in drug discovery. The current method integrates disparate evolutionary species into chemico-biologically coherent circuits, suggesting a new cross-species omics analysis strategy for rational drug development.
Accumulation of p53 via down-regulation of UBE2D family genes is a critical pathway for cadmium-induced renal toxicity
Authors: Lee Jin-Yong , Tokumoto Maki , Fujiwara Yasuyuki , Hasegawa Tatsuya , Seko Yoshiyuki , Shimada Akinori , Satoh Masahiko 
Published: February 2016

AbstractChronic cadmium (Cd) exposure can induce renal toxicity. In Cd renal toxicity, p53 is thought to be involved. Our previous studies showed that Cd down-regulated gene expression of the UBE2D (ubiquitin-conjugating enzyme E2D) family members. Here, we aimed to define the association between UBE2D family members and p53-dependent apoptosis in human proximal tubular cells (HK-2 cells) treated with Cd. Cd increased intracellular p53 protein levels and decreased UBE2D2 and UBE2D4 gene expression via inhibition of YY1 and FOXF1 transcription factor activities. Double knockdown of UBE2D2 and UBE2D4 caused an increase in p53 protein levels and knockdown of p53 attenuated not only Cd-induced apoptosis, but also Cd-induced apoptosis-related gene expression (BAX and PUMA). Additionally, the mice exposed to Cd for 6 months resulted in increased levels of p53 and induction of apoptosis in proximal tubular cells. These findings suggest that down-regulation of UBE2D family genes followed by accumulation of p53 in proximal tubular cells is an important mechanism for Cd-induced renal toxicity.
Steering Bell-diagonal states
Authors: Quan Quan , Zhu Huangjun , Liu Si-Yuan , Fei Shao-Ming , Fan Heng , Yang Wen-Li 
Published: February 2016

AbstractWe investigate the steerability of two-qubit Bell-diagonal states under projective measurements by the steering party. In the simplest nontrivial scenario of two projective measurements, we solve this problem completely by virtue of the connection between the steering problem and the joint-measurement problem. A necessary and sufficient criterion is derived together with a simple geometrical interpretation. Our study shows that a Bell-diagonal state is steerable by two projective measurements iff it violates the Clauser-Horne-Shimony-Holt (CHSH) inequality, in sharp contrast with the strict hierarchy expected between steering and Bell nonlocality. We also introduce a steering measure and clarify its connections with concurrence and the volume of the steering ellipsoid. In particular, we determine the maximal concurrence and ellipsoid volume of Bell-diagonal states that are not steerable by two projective measurements. Finally, we explore the steerability of Bell-diagonal states under three projective measurements. A simple sufficient criterion is derived, which can detect the steerability of many states that are not steerable by two projective measurements. Our study offers valuable insight on steering of Bell-diagonal states as well as the connections between entanglement, steering and Bell nonlocality.
Far-field measurements of vortex beams interacting with nanoholes
Authors: Zambrana-Puyalto Xavier , Vidal Xavier , Fernandez-Corbaton Ivan , Molina-Terriza Gabriel 
Published: February 2016

AbstractWe measure the far-field intensity of vortex beams going through nanoholes. The process is analyzed in terms of helicity and total angular momentum. It is seen that the total angular momentum is preserved in the process and helicity is not. We compute the ratio between the two transmitted helicity components, γm,p. We observe that this ratio is highly dependent on the helicity (p) and the angular momentum (m) of the incident vortex beam in consideration. Due to the mirror symmetry of the nanoholes, we are able to relate the transmission properties of vortex beams with a certain helicity and angular momentum, with the ones with opposite helicity and angular momentum. Interestingly, vortex beams enhance the γm,p ratio as compared to those obtained by Gaussian beams.
LiNbO3 thin film ACP phase modulator for hybridly integrated ACP‐OPLL
Authors: Xu Longtao , Jin Shilei , Li Yifei 
Published: February 2016

The first LiNbO3 thin film attenuated counter propagation (ACP) phase modulator is presented. The modulator demonstrates a Vπ of 2.5 V and a record 3 dB ACP modulator bandwidth of ∼1.8 GHz. It also demonstrated a lumped element response that is free of propagation delay. This device should be able to be integrated with external photodetectors to form a wideband ACP‐optical phase lock loop.
Dual‐polarised metal‐mountable UHF RFID tag antenna for polarisation diversity
Authors: Yang E.‐S. , Son H.‐W. 
Published: February 2016

A polarisation diversity antenna for an ultra‐high‐frequency RFID tag is presented. The antenna consists of two dual‐planar inverted‐F antennas arranged in a cross‐configuration, and mountable on a metallic object. The antenna can work together with a linearly polarised reader antenna that has an arbitrary polarisation direction. The proposed tag antenna has a nearly uniform read range between 9.1 and 10.2 m, regardless of the polarisation direction of the reader's transmit field.
Dorsal Intramedullary Lipoma without Spinal Dysraphism: A Rare Case Report and Review of Literature
Authors: Baishya Basanta Kumar , Agarwal Sushant , Hussain Zakir , Dutta Deep 
Published: February 2016

Study Design Case report.
Objective The study aims to report a rare case of dorsal intramedullary lipoma, its management, and outcome.
Background We are reporting the rare case of a 23-year-old man with dorsal intramedullary lipoma without spinal dysraphism. The clinical presentation, diagnosis, and management are discussed with relevant review of literature.
Conclusion Intramedullary cord lipoma without spinal dysraphism can be a cause of myelopathy, and proper diagnosis with MRI and subtotal excision preserving the vital cord parenchyma should be the goal, which can give a better outcome.
Emergency Department Presentation and Mortality Rate Due to Overdose: A Retrospective Cohort Study on Nonfatal Overdoses
Authors: Pavarin Raimondo Maria , Berardi Domenico , Gambini Daniele 
Published: February 2016

Background: The aims of this retrospective cohort study are to describe the presentation characteristics for nonfatal overdose-related complaints at the emergency departments (EDs) of the metropolitan area of Bologna (northern Italy), to estimate the subsequent risk of mortality by overdose, and to identify the profiles of the subjects most at risk. Methods: Records of patients admitted to 10 EDs for overdose between January 2004 and December 2012 were retrospectively evaluated. The International Classification of Diseases was used to ascertain the cause of death. Results: A total of 294 episodes of overdose involving 218 individuals were identified. The total time at risk was 1048 person-years (PY). The mortality rate for all causes was 35.48 per 1000 PY for males and 20.61 per 1000 PY for females. The mortality rate for overdose was 16.6 per 1000 PY for males and 13.74 per 1000 PY for females. In the multivariate regression analysis, the time from first ED overdose access (less than 1 year risk ratio [RR]: 7.07, 95% confidence interval [CI]: 5.32–9.39) was significantly associated with death by overdose. Males, subjects aged >30 years at presentation, patients who refused ED treatment, and those having previously contacted mental health services showed an increased mortality risk due to overdose. Conclusions: Experiencing a nonfatal overdose within the past 12 months increases the risk of mortality compared with an overdose more than 12 months earlier. Nonfatal overdose patients presenting to an ED form a specific target for prevention projects.
The effect of mate removal on dawn singing behaviour in male pied bush chats
Authors: Sethi Vinaya Kumar , Bhatt Dinesh , Kumar Amit 
Published: February 2016

Abstract
To determine the influence of pairing status on dawn singing behaviour in pied bush chats Saxicola caprata, we conducted mate removal experiments across eight territories. The experiment was divided into three stages: pre-removal (pairs were present on their respective territories), removal (females were experimentally removed), and returned (females were released into the focal pairs’ territories). Dawn bout length, song rate, song complexity, percentage performance time, song perch height, and distance of singing location to territory boundary were measured for each male during each experimental stage. We did not find an effect of mate removal on any dawn song characteristics of male pied bush chats suggesting that the presence or absence of a mate does not influence male dawn singing behaviour. Our findings further suggest that males use dawn chorus to mediate social relationships with neighbouring males to proclaim an established territory.
Cutting the Gordian knot: Complex signaling in African cichlids is more than multimodal
Authors: Van Staaden Moira J. , Smith Adam R. 
Published: February 2016

Abstract
The active transmission of information from sender to receiver is a fundamental component of communication, and is therefore a primary facet in evolutionary models of sexual selection. Research in several systems has underlined the importance of multiple sensory modalities in courtship signals. However, we still tend to think of individuals as having a relatively static signal in consecutive communicative events. While this may be true for certain traits such as body size or coloration, behaviorally modulated signals can quickly violate this assumption. In this work, we explore how intraspecific variation may be an important component of interspecific signal divergence using cichlid fishes from Lake Malawi. Behavioral analyses were made using six species of Malawian cichlids from two divergent genera. While interspecific differences were found between congeners based on species-level analyses of both acoustic and audiovisual signals, intraspecific variation was of a similar magnitude. Specifically, individual fishes were found to possess highly plastic signal repertoires. This finding was ubiquitous across all species and resulted in a great deal of overlap between heterospecific individuals, despite statistically distinct species means. These results demonstrate that some aspects of courtship in Malawian cichlids are more plastic than previously proposed, and that studies must account for signal variability within individuals. We propose here that behavioral variability in signaling is important in determining the communication landscape on which signals are perceived. We review potential complexity deriving from multimodal signaling, discuss the sources for such lability, and suggest ways in which this issue may be approached experimentally.
Effect of losing a fight on later agonistic behavior toward unfamiliar conspecifics in male Syrian hamsters
Authors: Delbarco-Trillo Javier , Johnston Robert E. 
Published: February 2016

Abstract
In many species, agonistic interactions result in social relationships that are stable over time. In Syrian hamsters, two unfamiliar males that are placed together will fight vigorously and a clear winner/loser relationship is usually established. In subsequent interactions, the loser will flee soon after detecting the familiar winner. Here we tested the hypothesis that losing a fight with a conspecific will affect future agonistic interactions not only toward that individual (i.e., the familiar winner) but also toward unfamiliar conspecifics. To test this hypothesis we paired two Syrian hamster males in three trials on one day in which the loser had the opportunity to escape the winner. The next day the loser was paired with an unfamiliar male, also for three trials. If he lost again, he was tested on a third day with a third unfamiliar male. Subjects were those males that were losers on all three days. The latency to escape on the first trial on Days 2 and 3 was significantly shorter than on the first trial on Day 1, indicating that losing against the first male affected the response toward unfamiliar males. However, the latency to escape on the first trial on Days 2 and 3 was significantly longer than that on the third trial on the preceding day, indicating that a loser treats unfamiliar males differently than a familiar winner. These results suggest that a defeat during an interaction with one male affects later agonistic behavior towards other, unfamiliar males.
Prime waterfront real estate: Apple snails choose wild taro for oviposition sites
Authors: Kyle Colin H. , Kropf Alexis W. , Burks Romi L. 
Published: February 2016

Abstract
While difficult to prevent introductions, scientific research can help guide control efforts of exotic, invasive species. South American island apple snails Pomacea insularum have quickly spread across the United States Gulf Coast and few control measures exist to delay their spread. Usually occupying cryptic benthic habitats, female apple snails crawl out of the water to deposit large, bright pink egg clutches on emergent objects. To help identify the most likely place to find and remove clutches, we conducted four lab experiments to investigate what specific object qualities (i.e. material; shape and height; plant species; natural and artificial) attracted P. insularum females to lay clutches. In our fourth experiment, we specifically examined the relationship between female size and reproductive output. To further understand reproductive output, we quantified experimental clutch characteristics (height above water, dimensions, mass, approximate volume, number of eggs, hatching efficiency). Pomacea insu-larum females laid more clutches on plant material, chose round over flat surfaces and failed to differentiate between tall and short structures. In comparison to a common native plant in the eastern US, Pontederia cordata, snails clearly preferred to lay clutches on a widely distributed exotic, invasive plant (wild taro, Colocasia esculenta). Unexpectedly, smaller snails showed higher overall total fecundity as well as more eggs per clutch than larger snails. Therefore, hand removal efforts of large females may not be enough to slow down clutch production. Collectively, our results indicate that conservationists and managers should search emergent plants for P. insularum clutches carefully to guard against established populations.
Taxonomic confusion of two tramp ant species: Iridomyrmex anceps and Ochetellus glaber are really species complexes
Authors: Hoffmann Benjamin D. , Andersen Alan N. , Zhang Xiang 
Published: February 2016

Abstract
Many invasive invertebrates belong to unresolved species complexes, and have a history of misidentification and inappropriate management. Here we detail confusion surrounding the taxonomy and identification of two dolichoderine ant species, Iridomyrmex anceps Roger and Ochetellus glaber Mayr, which are commonly cited in the literature as having been spread widely by human commerce. We provide morphometric data and images strongly suggesting that these two “species” are instead complexes of species that are likely native to many regions where they are purportedly introduced. We take particular interest in the status of species referred to as I. anceps and O. glaber in China, as this is the most northerly distribution of both genera. We conclude by suggesting that many identifications of both species are likely to be unreliable, and we recommend against any management action aimed at controlling these species under the assumption that they are exotic.
An empirical movement model for sixgill sharks in Puget Sound: Combining observed and unobserved behavior
Authors: Levin Phillip S. , Horne Peter , Andrews Kelly S. , Williams Greg 
Published: February 2016

Abstract
Understanding the movement of animals is fundamental to population and community ecology. Historically, it has been difficult to quantify movement patterns of most fishes, but technological advances in acoustic telemetry have increased our abilities to monitor their movement. In this study, we combined small-scale active acoustic tracking with large-scale passive acoustic monitoring to develop an empirical movement model for sixgill sharks in Puget Sound, WA, USA. We began by testing whether a correlated random walk model described the daily movement of sixgills; however, the model failed to capture home-ranging behavior. We added this behavior and used the resultant model (a biased random walk model) to determine whether daily movement patterns are able to explain large-scale seasonal movement. The daily model did not explain the larger-scale patterns of movement observed in the passive monitoring data. In order to create the large-scale patterns, sixgills must have performed behaviors (large, fast directed movements) that were unobserved during small-scale active tracking. In addition, seasonal shifts in location were not captured by the daily model. We added these ‘unobserved’ behaviors to the model and were able to capture large-scale seasonal movement of sixgill sharks over 150 days. The development of empirical models of movement allows researchers to develop hypotheses and test mechanisms responsible for a species movement behavior and spatial distribution. This knowledge will increase our ability to successfully manage species of concern.
Why do fish school?
Authors: Larsson Matz 
Published: February 2016

Abstract
Synchronized movements (schooling) emit complex and overlapping sound and pressure curves that might confuse the inner ear and lateral line organ (LLO) of a predator. Moreover, prey-fish moving close to each other may blur the electro-sensory perception of predators. The aim of this review is to explore mechanisms associated with synchronous swimming that may have contributed to increased adaptation and as a consequence may have influenced the evolution of schooling. The evolutionary development of the inner ear and the LLO increased the capacity to detect potential prey, possibly leading to an increased potential for cannibalism in the shoal, but also helped small fish to avoid joining larger fish, resulting in size homogeneity and, accordingly, an increased capacity for moving in synchrony. Water-movements and incidental sound produced as by-product of locomotion (ISOL) may provide fish with potentially useful information during swimming, such as neighbour body-size, speed, and location. When many fish move close to one another ISOL will be energetic and complex. Quiet intervals will be few. Fish moving in synchrony will have the capacity to discontinue movements simultaneously, providing relatively quiet intervals to allow the reception of potentially critical environmental signals. Besides, synchronized movements may facilitate auditory grouping of ISOL. Turning preference bias, well-functioning sense organs, good health, and skillful motor performance might be important to achieving an appropriate distance to school neighbors and aid the individual fish in reducing time spent in the comparatively less safe school periphery. Turning preferences in ancestral fish shoals might have helped fish to maintain groups and stay in formation, reinforcing aforementioned predator confusion mechanisms, which possibly played a role in the lateralization of the vertebrate brain.
Spawning ascent durations of pelagic spawning reef fishes
Authors: Habrun Caroline A. , Sancho Gorka 
Published: February 2016

Abstract
Predation risks have been hypothesized to influence spawning behaviors of coral reef fishes that broadcast gametes pelagically. The duration of spawning ascents of 13 species were measured from video footage at a single spawning site for multiple coral reef fishes to investigate if this behavior was influenced by varying risks of predation. Fishes that spawned in pairs had ascents of longer duration than group-spawning species. Duration of spawning ascents did not vary between fishes spawning at daytime and dusk, nor between group-spawning species with specific anti-predatory morphological adaptations. These results indicate that risk of predation may not significantly influence the duration of spawning ascents of pair spawning reef fishes at our study site, while group-spawning behaviors are influenced by predation. Avoidance of egg predation by benthic organisms and female mate choice are more likely to influence the pelagic spawning behaviors of all fishes observed.