bluuebunny/crossref_metadata_2025_split huggingface dataset:
Trauma-specific Grey Matter Alterations in PTSD
Authors: Meng Linghui , Jiang Jing , Jin Changfeng , Liu Jia , Zhao Youjin , Wang Weina , Li Kaiming , Gong Qiyong 
Published: September 2016

AbstractPrevious studies have demonstrated that patients with posttraumatic stress disorder (PTSD) caused by different types of trauma may show divergence in epidemiology, clinical manifestation and treatment outcome. However, it is still unclear whether this divergence has neuroanatomic correlates in PTSD brains. To elucidate the general and trauma-specific cortical morphometric alterations, we performed a meta-analysis of grey matter (GM) changes in PTSD (N = 246) with different traumas and trauma-exposed controls (TECs, N = 347) using anisotropic effect-size signed differential mapping and its subgroup analysis. Our results revealed general GM reduction (GMR) foci in the prefrontal-limbic-striatal system of PTSD brains when compared with those of TECs. Notably, the GMR patterns were trauma-specific. For PTSD by single-incident traumas, GMR foci were found in bilateral medial prefrontal cortex (mPFC), anterior cingulate cortex (ACC), insula, striatum, left hippocampus and amygdala; and for PTSD by prolonged traumas in the left insula, striatum, amygdala and middle temporal gyrus. Moreover, Clinician-Administered PTSD Scale scores were found to be negatively associated with the GM changes in bilateral ACC and mPFC. Our study indicates that the GMR patterns of PTSD are associated with specific traumas, suggesting a stratified diagnosis and treatment for PTSD patients.
Population genomics of C. melanopterus using target gene capture data: demographic inferences and conservation perspectives
Authors: Maisano Delser Pierpaolo , Corrigan Shannon , Hale Matthew , Li Chenhong , Veuille Michel , Planes Serge , Naylor Gavin , Mona Stefano 
Published: September 2016

AbstractPopulation genetics studies on non-model organisms typically involve sampling few markers from multiple individuals. Next-generation sequencing approaches open up the possibility of sampling many more markers from fewer individuals to address the same questions. Here, we applied a target gene capture method to deep sequence ~1000 independent autosomal regions of a non-model organism, the blacktip reef shark (Carcharhinus melanopterus). We devised a sampling scheme based on the predictions of theoretical studies of metapopulations to show that sampling few individuals, but many loci, can be extremely informative to reconstruct the evolutionary history of species. We collected data from a single deme (SID) from Northern Australia and from a scattered sampling representing various locations throughout the Indian Ocean (SCD). We explored the genealogical signature of population dynamics detected from both sampling schemes using an ABC algorithm. We then contrasted these results with those obtained by fitting the data to a non-equilibrium finite island model. Both approaches supported an Nm value ~40, consistent with philopatry in this species. Finally, we demonstrate through simulation that metapopulations exhibit greater resilience to recent changes in effective size compared to unstructured populations. We propose an empirical approach to detect recent bottlenecks based on our sampling scheme.
G-quadruplex aptamer targeting Protein A and its capability to detect Staphylococcus aureus demonstrated by ELONA
Authors: Stoltenburg Regina , Krafčiková Petra , Víglaský Viktor , Strehlitz Beate 
Published: September 2016

AbstractAptamers for whole cell detection are selected mostly by the Cell-SELEX procedure. Alternatively, the use of specific cell surface epitopes as target during aptamer selections allows the development of aptamers with ability to bind whole cells. In this study, we integrated a formerly selected Protein A-binding aptamer PA#2/8 in an assay format called ELONA (Enzyme-Linked OligoNucleotide Assay) and evaluated the ability of the aptamer to recognise and bind to Staphylococcus aureus presenting Protein A on the cell surface. The full-length aptamer and one of its truncated variants could be demonstrated to specifically bind to Protein A-expressing intact cells of S. aureus and thus have the potential to expand the portfolio of aptamers that can act as an analytical agent for the specific recognition and rapid detection of the bacterial pathogen. The functionality of the aptamer was found to be based on a very complex, but also highly variable structure. Two structural key elements were identified. The aptamer sequence contains several G-clusters allowing folding into a G-quadruplex structure with the potential of dimeric and multimeric assembly. An inverted repeat able to form an imperfect stem-loop at the 5′-end also contributes essentially to the aptameric function.
Construction of a Corneal Stromal Equivalent with SMILE-Derived Lenticules and Fibrin Glue
Authors: Yin Houfa , Qiu Peijin , Wu Fang , Zhang Wei , Teng Wenqi , Qin Zhenwei , Li Chao , Zhou Jiaojie , Fang Zhi , Tang Qiaomei , Fu Qiuli , Ma Jian , Yang Yabo 
Published: September 2016

AbstractThe scarcity of corneal tissue to treat deep corneal defects and corneal perforations remains a challenge. Currently, small incision lenticule extraction (SMILE)-derived lenticules appear to be a promising alternative for the treatment of these conditions. However, the thickness and toughness of a single piece of lenticule are limited. To overcome these limitations, we constructed a corneal stromal equivalent with SMILE-derived lenticules and fibrin glue. In vitro cell culture revealed that the corneal stromal equivalent could provide a suitable scaffold for the survival and proliferation of corneal epithelial cells, which formed a continuous pluristratified epithelium with the expression of characteristic markers. Finally, anterior lamellar keratoplasty in rabbits demonstrated that the corneal stromal equivalent with decellularized lenticules and fibrin glue could repair the anterior region of the stroma, leading to re-epithelialization and recovery of both transparency and ultrastructural organization. Corneal neovascularization, graft degradation and corneal rejection were not observed within 3 months. Taken together, the corneal stromal equivalent with SMILE-derived lenticules and fibrin glue appears to be a safe and effective alternative for the repair of damage to the anterior cornea, which may provide new avenues in the treatment of deep corneal defects or corneal perforations.
Segmentation of the Himalayas as revealed by arc-parallel gravity anomalies
Authors: Hetényi György , Cattin Rodolphe , Berthet Théo , Le Moigne Nicolas , Chophel Jamyang , Lechmann Sarah , Hammer Paul , Drukpa Dowchu , Sapkota Soma Nath , Gautier Stéphanie , Thinley Kinzang 
Published: September 2016

AbstractLateral variations along the Himalayan arc are suggested by an increasing number of studies and carry important information about the orogen’s segmentation. Here we compile the hitherto most complete land gravity dataset in the region which enables the currently highest resolution plausible analysis. To study lateral variations in collisional structure we compute arc-parallel gravity anomalies (APaGA) by subtracting the average arc-perpendicular profile from our dataset; we compute likewise for topography (APaTA). We find no direct correlation between APaGA, APaTA and background seismicity, as suggested in oceanic subduction context. In the Himalayas APaTA mainly reflect relief and erosional effects, whereas APaGA reflect the deep structure of the orogen with clear lateral boundaries. Four segments are outlined and have disparate flexural geometry: NE India, Bhutan, Nepal & India until Dehradun, and NW India. The segment boundaries in the India plate are related to inherited structures, and the boundaries of the Shillong block are highlighted by seismic activity. We find that large earthquakes of the past millennium do not propagate across the segment boundaries defined by APaGA, therefore these seem to set limits for potential rupture of megathrust earthquakes.
Critical behavior of the quasi-two-dimensional semiconducting ferromagnet CrSiTe3
Authors: Liu Bingjie , Zou Youming , Zhang Lei , Zhou Shiming , Wang Zhe , Wang Weike , Qu Zhe , Zhang Yuheng 
Published: September 2016

AbstractThe semiconducting ferromagnet CrSiTe3 is a promising candidate for two-dimensional magnet simply by exfoliating down to single layers. To understand the magnetic behavior in thin-film samples and the possible applications, it is necessary to establish the nature of the magnetism in the bulk. In this work, the critical behavior at the paramagnetic to ferromagnetic phase transition in single-crystalline CrSiTe3 is investigated by bulk magnetization measurements. We have obtained the critical exponents (β = 0.170 ± 0.008, γ = 1.532 ± 0.001, and δ = 9.917 ± 0.008) and the critical temperature TC = 31.0 K using various techniques such as modified Arrott plot, Kouvel-Fisher plot, and critical isotherm analysis. Our analysis suggests that the determined exponents match well with those calculated from the results of renormalization group approach for a two-dimensional Ising model coupled with long-range interaction.
Disrupted brain metabolic connectivity in a 6-OHDA-induced mouse model of Parkinson’s disease examined using persistent homology-based analysis
Authors: Im Hyung-Jun , Hahm Jarang , Kang Hyejin , Choi Hongyoon , Lee Hyekyoung , Hwang Do Won , Kim E. Edmund , Chung June-Key , Lee Dong Soo 
Published: September 2016

AbstractMovement impairments in Parkinson’s disease (PD) are caused by the degeneration of dopaminergic neurons and the consequent disruption of connectivity in the cortico-striatal-thalamic loop. This study evaluated brain metabolic connectivity in a 6-Hydroxydopamine (6-OHDA)-induced mouse model of PD using 18F-fluorodeoxy glucose positron emission tomography (FDG PET). Fourteen PD-model mice and ten control mice were used for the analysis. Voxel-wise t-tests on FDG PET results yielded no significant regional metabolic differences between the PD and control groups. However, the PD group showed lower correlations between the right caudoputamen and the left caudoputamen and right visual cortex. Further network analyses based on the threshold-free persistent homology framework revealed that brain networks were globally disrupted in the PD group, especially between the right auditory cortex and bilateral cortical structures and the left caudoputamen. In conclusion, regional glucose metabolism of PD was preserved, but the metabolic connectivity of the cortico-striatal-thalamic loop was globally impaired in PD.
Canadian Arctic sea ice reconstructed from bromine in the Greenland NEEM ice core
Authors: Spolaor Andrea , Vallelonga Paul , Turetta Clara , Maffezzoli Niccolò , Cozzi Giulio , Gabrieli Jacopo , Barbante Carlo , Goto-Azuma Kumiko , Saiz-Lopez Alfonso , Cuevas Carlos A. , Dahl-Jensen Dorthe 
Published: September 2016

AbstractReconstructing the past variability of Arctic sea ice provides an essential context for recent multi-year sea ice decline, although few quantitative reconstructions cover the Holocene period prior to the earliest historical records 1,200 years ago. Photochemical recycling of bromine is observed over first-year, or seasonal, sea ice in so-called “bromine explosions” and we employ a 1-D chemistry transport model to quantify processes of bromine enrichment over first-year sea ice and depositional transport over multi-year sea ice and land ice. We report bromine enrichment in the Northwest Greenland Eemian NEEM ice core since the end of the Eemian interglacial 120,000 years ago, finding the maximum extension of first-year sea ice occurred approximately 9,000 years ago during the Holocene climate optimum, when Greenland temperatures were 2 to 3 °C above present values. First-year sea ice extent was lowest during the glacial stadials suggesting complete coverage of the Arctic Ocean by multi-year sea ice. These findings demonstrate a clear relationship between temperature and first-year sea ice extent in the Arctic and suggest multi-year sea ice will continue to decline as polar amplification drives Arctic temperatures beyond the 2 °C global average warming target of the recent COP21 Paris climate agreement.
Prevalence and Subtypes of Mild Cognitive Impairment in Parkinson’s Disease
Authors: Lawrence Blake J. , Gasson Natalie , Loftus Andrea M. 
Published: September 2016

AbstractThe current study examined the prevalence and subtypes of Mild Cognitive Impairment (MCI) in an Australian sample of people with Parkinson’s Disease (PD). Seventy participants with PD completed neuropsychological assessments of their cognitive performance, using MDS Task Force Level II diagnostic criteria for PD-MCI. A cut-off score of less than one standard deviation (SD) below normative data determined impaired performance on a neuropsychological test. Of 70 participants, 45 (64%) met Level II diagnostic criteria for PD-MCI. Among those with PD-MCI, 42 (93%) were identified as having multiple domain impairment (28 as amnestic multiple domain and 14 as nonamnestic multiple domain). Single domain impairment was less frequent (2 amnestic/1 nonamnestic). Significant differences were found between the PD-MCI and Normal Cognition groups, across all cognitive domains. Multiple domain cognitive impairment was more frequent than single domain impairment in an Australian sample of people with PD. However, PD-MCI is heterogeneous and current prevalence and subtyping statistics may be an artifact of variable application methods of the criteria (e.g., cut off scores and number of tests). Future longitudinal studies refining the criteria will assist with subtyping the progression of PD-MCI, while identifying individuals who may benefit from pharmacological and nonpharmacological interventions.
Circulating Fibroblast Growth Factor 21 is Associated with Diastolic Dysfunction in Heart Failure Patients with Preserved Ejection Fraction
Authors: Chou Ruey-Hsing , Huang Po-Hsun , Hsu Chien-Yi , Chang Chun-Chin , Leu Hsin-Bang , Huang Chin-Chou , Chen Jaw-Wen , Lin Shing-Jong 
Published: September 2016

AbstractFibroblast growth factor 21 (FGF21), a polypeptide ligand promoted glucose homeostasis and lipids metabolism, was recently reported to attenuate cardiac hypertrophy. The aim of this study was to investigate the impact of FGF21 in diastolic heart failure. Subjects admitted for coronary angiogram were screened for heart failure and those with left ventricular (LV) ejection fraction < 45% were excluded. Diastolic dysfunction was defined as functional abnormalities that exist during LV relaxation and filling by echocardiographic criteria. Plasma levels of FGF21 and N-terminal Pro-Brain Natriuretic Peptide (NT-pro-BNP) were determined. All patients were followed up for 1 year, or till the occurrence of heart failure readmission or death. Totally 95 patients with diastolic dysfunction and 143 controls were enrolled. Circulating FGF21 level was correlated with echocardiographic parameters of diastolic function and LV end-diastolic pressure (LVEDP). In multivariate logistic analysis, FGF21 was significantly associated with diastolic dysfunction, either identified by echocardiographic criteria (odds ratio: 2.97, p = 0.012) or confirmed with LVEDP level (odds ratio: 3.73, p = 0.030). Both plasma FGF21 (log rank p < 0.0001) and NT-pro-BNP levels (log rank p = 0.0057) showed good predictive power to the 1-year adverse cardiac events. This finding suggested FGF21 could be involved in the pathophysiology of diastolic heart failure.
Asymptomatic Extracranial Artery Stenosis and the Risk of Cardiovascular and Cerebrovascular Diseases
Authors: Wang Dandan , Wang Jing , Jin Cheng , Ji Ruijun , Wang Anxin , Li Xin , Gao Xiang , Wu Shouling , Zhou Yong , Zhao Xingquan 
Published: September 2016

AbstractAsymptomatic extracranial artery stenosis (ECAS) is a well-known risk factor for stroke events, but it remains unclear whether it has the same role in predicting cardiovascular and cerebrovascular diseases, especially in China. We investigated the potential associations between ECAS, carotid plaque and carotid intima-media thickness and the new occurrence of cardiovascular and cerebrovascular diseases in the study. Out of 5440 study participants, 364 showed an asymptomatic ECAS at baseline and 185 had come up to the final vascular events (brain infarction, intracerebral hemorrhage, subarachnoid hemorrhage, coronary heart disease and death due to the vascular diseases). During the follow- up. ECAS, carotid plaque and its instability and increased CIMT have associated with vascular events significantly (P < 0.05). After adjusting relevant vascular risk factors, ECAS still has a strong relationship with the new occurrence of vascular events, especially the brain infarction (HR: 2.101; 95% CI: 1.027–4.298; P = 0.042). We observed a clear relationship between ECAS and the new occurrence of cardiovascular and cerebrovascular disease, especially the brain infarction event. Carotid plaque and its instability and increased CIMT have all relevant with the occurrence of vascular events. Our findings provide direct evidence for the importance of ECAS in vascular events occurrence.
Sonochemical/hydration—dehydration synthesis of Pt—TiO2 NPs/decorated carbon nanotubes with enhanced photocatalytic hydrogen production activity
Authors: Abdulrazzak Firas H. , Hussein Falah H. , Alkaim Ayad F. , Ivanova Irina , Emeline Alexei V. , Bahnemannd Detlef W. 
Published: September 2016

Abstract
Modified Pt-TiO2 NPs/decorated carbon nanotubes were synthesized utilizing sonochemical/hydration—dehydration techniques. Pt was loaded on TiO2 by a photodeposition method keeping in mind the end goal to achieve electron—hole pair separation and promote the surface reaction. The morphological and basic properties of Pt-TiO2/fCNTs were investigated by field emission scanning electron microscopy (FESEM), high resolution transmission electron microscopy (HRTEM), powder X-ray diffraction (XRD), UV—vis diffuse reflectance spectroscopy (DRS), photoluminescence (PL) and Raman spectroscopy. The selected area electron diffraction (SAED) patterns of Pt-TiO2/fCNTs were obtained utilizing TEM-based energy dispersive X-ray spectroscopy (EDXS) analysis. It was found that the TiO2 nanoparticles were uniformly distributed on the fCNTs, and the Pt particles were decorated on the surface of TiO2/fCNTs. The photocatalytic hydrogen production activity of the Pt(0.5%)-TiO2/fCNTs(0.5%) nanoparticle composites was investigated using a sacrificial agent methanol solution. Pt-loaded TiO2 demonstrated a hydrogen evolution rate around 20 times that of TiO2/fCNTs(0.5%) (fSWCNTs, fMWCNTs). When compared with platinized TiO2 in methanol, which was utilized as a control material, Pt-TiO2/fCNTs demonstrated an almost 2-fold increment in hydrogen generation.
Minimally Invasive Direct Lateral Corpectomy of the Thoracolumbar Spine for Metastatic Spinal Cord Compression
Authors: Tan Terence , Chu Jocelyn , Thien Christopher , Wang Yi 
Published: September 2016

Objectives To evaluate the feasibility, safety, clinical, and radiologic outcomes of a minimally invasive direct lateral-approach corpectomy (MIDLaC) for decompression and stabilization of symptomatic metastatic spinal cord compression (MSCC).
Methods A retrospective study on a prospective cohort was conducted. Nineteen patients were consecutively treated with MIDLaC and posterior pedicle screw fixation between May 2012 and July 2014. Demographic information and radiologic outcomes including sagittal deformity correction and vertebral body height were recorded. Operative variables (operative duration, blood loss) and clinical variables (Tokuhashi score, mortality, complication rate, pain visual analogue scale [VAS], opioid usage, and Frankel grade) were recorded and analyzed.
Results All nineteen patients (mean age: 67.6 ± 12.7 years) successfully underwent MIDLaC with excellent neural decompression. Operative duration was 188.4 ± 30.3 minutes for single-level MIDLaC and 327.2 ± 71.9 minutes for multilevel surgery (p < 0.0001). Mean blood loss per spinal level was 390.8 mL with a decrease to 102.3 mL excluding renal cell MSCC. A total of 47.4% of patients had a Tokuhashi score of 0 to 8. There was one approach-related complication and one perioperative mortality. The overall complication rate was 15.8% (n = 3) with no postoperative wound infections. Kaplan-Meier survival estimates at 6 months were 0.50. Overall, 31.6% of patients improved by one or more Frankel grades, and no patients demonstrated worsening neurology postoperatively. VAS was significantly improved postoperatively (p < 0.05). Vertebral body height was significantly increased (+7.6 ± 8.1 mm; p = 0.002), with improvements in lumbar lordosis (8.3 ± 7.3 degrees) and thoracic kyphosis (2.4 ± 7.1 degrees) postoperatively.
Conclusion MIDLaC is a safe and feasible palliative approach in the management of MSCC with encouraging early clinical outcomes. Further prospective studies are required to define the role of MIDLaC in the management of MSCC vis-à-vis other mini-open or minimally invasive techniques.
Clathrin-dependent endocytosis is required for immunity mediated by pattern recognition receptor kinases
Authors: Mbengue Malick , Bourdais Gildas , Gervasi Fabio , Beck Martina , Zhou Ji , Spallek Thomas , Bartels Sebastian , Boller Thomas , Ueda Takashi , Kuhn Hannah , Robatzek Silke 
Published: September 2016

Significance
Plants detect conserved molecular patterns of pathogens via cell surface-localized receptors, such as the flagellin receptor kinase FLS2, that initiate effective plant immunity. Activated FLS2 is endocytosed, but the degree to which other receptor kinases exhibit similar spatiotemporal dynamics remains unclear. We show that internalization into a common endosomal pathway after ligand perception is a general phenomenon of the tested receptor kinases, including the danger peptide receptor PEPR1. FLS2 endocytosis is mediated by clathrin and is uncoupled from the regulation of acute pathogen-induced responses, but is involved in steady defenses and contributes to plant immunity against bacterial infection. We propose that clathrin-dependent internalization of ligand-activated receptor kinases into a common endosomal pathway facilitates the responses required for full plant immunity.
Single-cell dynamics and variability of MAPK activity in a yeast differentiation pathway
Authors: Conlon Patrick , Gelin-Licht Rita , Ganesan Ambhighainath , Zhang Jin , Levchenko Andre 
Published: September 2016

Significance
The yeast mating pathway has long served as a prototypical signal transduction system, but key questions regarding intracellular signaling dynamics remain, including how signaling takes place and is used over time during the differentiation response. Utilizing a single-cell FRET reporter approach, this study indicates that signaling dynamics is governed by complex feedback interactions and that distinct MAPK activity patterns promote early and late phases of mating differently. Whereas submaximal activity is maintained through cell-cycle arrest and mating partner engagement, activity intensification and rapid loss coincide with cell polarization and fusion of prezygote cells. These findings provide new insights into the signaling mechanisms underlying how yeast cells sense and then commit to a nearby mating partner.