bluuebunny/crossref_metadata_2025_split huggingface dataset:
429 Maternal rate of gain and one-carbon metabolites supplementation alters the gene expression profile of fetal brain during early gestation in beef heifers
Authors: Anas Muhammad , Ward Alison K , Da Diniz Wellison Jarles Silva , King Layla E , Syring Jessica G , Entzie Yssi L , Hirchert Mara R , Borowicz Pawel P P , Crouse Matt S , Reynolds Lawrence P P , Dahlen Carl R , Caton Joel S S 
Published: September 2024

Abstract
Maternal nutritional plane during pregnancy may leave lifelong impacts on offspring in beef cattle. Given that, we hypothesized that the supplementation of one-carbon metabolites (OCM) during pregnancy would mitigate the negative effects of maternal rate of gain through brain gene expression regulation in early developing bovine fetuses. The objective of this study was to evaluate the effects of OCM supplementation and maternal rate of gain on gene expression in the developing fetal brain in gestating beef heifers. Herein, Angus crossbred heifers (n = 72, body weight = 406 ± 33 kg) were randomly assigned to 2 × 2 factorial arrangement of treatments with two levels of maternal rate of gain (CON, 0.60 kg/d; and RES, -0.23 kg/d) each with or without OCM supplementation (+OCM, and -OCM). Heifers were fed individually and were bred using female-sexed semen from a single sire. The OCM supplementation included rumen-protected choline (44.4 g/d) and methionine (7.4 g/d) in corn carrier fed daily and weekly injections of folate (320 mg) and vitamin B12 (20 mg). The -OCM heifers received the corn carrier and saline injections. The treatments started at the time of breeding and continued until d 63 of gestation when pregnant heifers (n = 29) were slaughtered to collect fetal brain tissues for RNA sequencing. The fetal brain phenotypic data were analyzed using MIXED procedures of SAS, indicating that restricted nutrition affected the fetal right hemisphere weight (P &lt; 0.05), and there was a strong tendency for overall fetal brain weight (0.05 &lt; P &lt; 0.1) to be affected as well. Brain transcriptomics data were analyzed using STAR aligner and a total of 177 differentially expressed genes (DEGs, FDR &lt; 0.05) were identified across all treatment comparisons using DESeq2. Most of the DEGs were either isoforms of spliceosomal non-coding RNAs or micro-RNAs (miRNAs) associated with biological processes (FDR &lt; 0.1) like mRNA processing, cellular nitrogen metabolism, lipid metabolism, and post-transcriptional gene silencing. The key miRNAs upregulated in the brain tissue of restricted fetuses without OCM supplementation, bta-mir-2375, bta-mir-876, and bta-mir-196a-1, were found to be associated with early embryogenesis and essential cellular regulatory processes. Conversely, in restricted fetuses with OCM supplementation, upregulated miRNAs such as bta-mir-216b, bta-mir-2285dd, and bta-mir-1298 were linked to early embryonic development, muscular development, and lipid metabolism in cattle. Both phenotypic and transcriptomics data here revealed that the maternal rate of gain altered fetal brain development, with differences seemingly compensated by OCM supplementation. USDA is an equal opportunity provider and employer.
428 Influence of melatonin supplementation in pregnant multiparous crossbred beef cows grazing endophyte-infected tall fescue on dam weight, milk yield, and pre-weaning growth of steer calves
Authors: Snider Miriam A , Hopkins Carson R , Moss Nathaniel T , Looney Charles R , Powell Jeremy G , Kegley Elizabeth B , Coffey Ken P , Gadberry M Shane , Meyer Allison M , Lemley Caleb O , Littlejohn Brittni P 
Published: September 2024

Abstract
The objective was to evaluate the influence of melatonin supplementation in pregnant beef cattle grazing toxic, endophyte-infected tall fescue (E+) on post-calving dam body weight (BW), milk production, and preweaning growth of steer calves. Multiparous cows were artificially inseminated with sex-sorted semen (Y chromosome-bearing sperm) from a single Red Angus sire and maintained on pastures free from E+ fescue prior to the start of the treatment period. Pregnant cows were assigned to one of three treatment groups with two replications per treatment: non-toxic, novel endophyte-infected (NE+) tall fescue without melatonin supplementation (NE+/NM; n = 15), E+ fescue with melatonin supplementation (E+/M; n = 16), and E+ fescue without melatonin supplementation (E+/NM; n = 18). The treatment period was over 70 d between May and July (d 147 ± 1 to 217 ± 1 of gestation). A commercially available feed was mixed with melatonin (100 µg/kg BW) or without melatonin and hand-fed to each cow daily. At the conclusion of the treatment period (56 ± 18 d before parturition), cattle were moved to a single group and maintained on pastures free from E+ fescue for the remainder of the study. Dams and steer calves were weighed at d 0, 28, 56, 84, 112, 140, and 168 relative to calving (d 0 = calving). Four-hour milk yields on d 28 ± 3 and d 56 ± 3 were used to estimate daily milk volume and weight. Dam and calf BW were analyzed using the MIXED procedure of SAS specific for repeated measures with treatment, time, and the interaction as fixed effects and replicate as random. Calf birth weight, dam milk volume, and dam milk weight were analyzed using the MIXED procedure of SAS with treatment as a fixed effect and replicate as random. On d 28, estimated daily milk volume and weight were decreased (P &lt; 0.05) in E+/NM dams relative to NE+/NM dams. On d 56, estimated daily milk volume and weight were decreased (P &lt; 0.03) in E+/NM and E+/M dams relative to NE+/NM dams. There was an effect of time for dam and calf weights (P &lt; 0.01). There was a treatment by time interaction for calf body weight, with calves born to E+/NM dams having decreased body weight relative to calves born to NE+/NM and E+/M dams from d 112 to d 168 (P = 0.02). There were no other effects of treatment, time, or the interaction (P &gt; 0.05). These data suggest melatonin supplemented to pregnant crossbred multiparous beef cows grazing endophyte-infected tall fescue during mid-late gestation may increase preweaning growth of steer calves.
172 Impact of maternal and postnatal 25-hydroxycholecalciferol supplementation on porcine and avian satellite cell mitotic activity and skeletal muscle growth characteristics
Authors: Starkey Jessica D 
Published: September 2024

Abstract
Vitamin D is an essential micronutrient most well-known for regulating calcium and phosphorus homeostasis and bone mineralization. However, over the last 20 yr, the extra-skeletal, pleotropic effects of vitamin D and its metabolites have gained greater attention. For livestock species reared indoors, vitamin D supplementation is especially important and commonly achieved by dietary addition of cholecalciferol, also known as vitamin D3 (D3). Cholecalciferol is hydroxylated in the liver to produce the circulating form, 25-hydroxycholecalciferol (25OHD3), also called calcidiol. Circulating 25OHD3 is subsequently converted to 1α,25-hydroxycholecalciferol (1,25OHD3) which binds a nuclear receptor found in many tissues, including skeletal muscle, to elicit its effects. This presentation will focus on the recent work regarding the effects of both maternal and postnatal 25OHD3 supplementation on porcine and avian satellite cell mitotic activity and skeletal muscle growth characteristics. Feeding broilers 25OHD3 posthatch results in a satellite cell-mediated skeletal muscle hypertrophic response in the fast-twitch pectoralis major but not the slow-twitch biceps femoris. Maternal dietary supplementation of gilts and hens with 25OHD3 in place of the majority of D3 increases circulating 25OHD3 concentrations in both dams and their offspring. The improvements in vitamin D status coincide with positive effects on skeletal muscle fiber number in fetal piglets as well as satellite cell mitotic activity and hypertrophic growth of fibers in both swine and broiler chickens. Though, interestingly, combining maternal and posthatch 25OHD3 supplementation in broilers does not appear to produce additive or synergistic effects on SC-mediated muscle growth. However, increasing circulating concentrations of 25OHD3 by supplementing either the maternal or postnatal diet with 25OHD3 has positive effects on meat yield in both porcine and avian models. Overall, these data shed light on the cellular mechanisms behind the efficacy of this vitamin D supplementation strategy using commercially available 25OHD3 sources in increasing meat yield and yet, leaves enough unanswered questions remaining to warrant further exploration.
56 Establishing grain-based modified protocols for the nutritional and physical reconditioning of malnourished horses
Authors: Bardassi Ariane Tabari , Boyd Jamie A , Santos Hugo , Dodson Zach A , Rosa Laura Patterson 
Published: September 2024

Abstract
From April to June 2023, we conducted a study to evaluate the effects of Total Equine containing Ascophyllum nodosum seaweed and chelated minerals on the continued recovery and reconditioning of 10 horses. Horses were used on a preceding 8-wk study and given a 21-d, 24-h turnout, with ad libitum access to Bermuda hay washout period between trials. Once the washout was complete horses were randomly assigned to one of three diets: Control (Ctrl) - a commercial grain product and Bermuda hay (n = 3); Treatment (Trt) - Total Equine and Bermuda hay (n = 4); and Grain only (Grn) - Total Equine without Bermuda hay (n = 3); for 8 wk with ad libitum access to water. For Ctrl and Trt diets we offered hay twice a day in port-a-gazer tubs to control waste, adjusted daily for a 3% refusal rate, and orts were collected twice a day. Individuals were weighed weekly, and their body condition score (BCS) was evaluated during the standardization period, wk 4 and wk 8. Grain was offered at a rate of 0.005% BW + 227 kg and divided into 2 equal feedings for Ctrl and Trt diets, while for the Grn diet horses were offered up to 9.07 kg of grain divided into 3 daily feedings, with grain amounts adjusted weekly based on BW. For physical reconditioning, horses were exercised 5 d/wk with a Priefert hot walker, increased in duration and intensity from wk 1 to 8. We collected samples of grain, hay, and orts for DM, NDF, ADF, EE, CP, and ash analysis. Blood samples were collected at wk 0, 4, and 8 for analysis. Baseline health parameters as rectal temperature, heart, and respiratory rate were measured weekly throughout the study to evaluate possible detrimental effects of the trial. Data were analyzed using Proc Mixed procedures in SAS. Investigation into Dry matter intake (DMI) between the Ctrl and Trt cohorts revealed no significant difference. However, significant differences (P ≤ 0.05) were observed in Overall DMI (grain + hay) among Grn and other diet pairs. Significant average daily gain (ADG) and Efficiency (EFF) observations in wk 1, 4, and 6 (P ≤ 0.05) suggest that Total Equine grain had better overall performance in both groups during the first 6 wk of the trial compared with the Ctrl grain. Our results demonstrate the successful outcome of a modified, grain-based protocol in nutritional and physical reconditioning of a cohort of malnourished horses. Further evaluation of larger populations is still needed.
146 The effects of antimicrobials and antimicrobial associated diarrhea on the fecal microbiome of the horse
Authors: Arnold Carolyn E 
Published: September 2024

Abstract
Antibiotics are commonly given to horses to treat known bacterial infections or as prophylaxis against the development of infection. Diarrhea is a recognized adverse effect of antimicrobial administration in horses (antimicrobial associated diarrhea, AAD). In veterinary referral centers, AAD has a reported incidence of 22 to 94% (McGorum, 2010), while horses with AAD are 4.5 times more likely to die compared with horses with other types of colitis (Woods and Cohen, 1999). Although all antibiotics have potential to induce diarrhea, some have increased risk due to low oral absorption, biliary excretion, or enterohepatic recycling. The role of dysbiosis in the gut microbiota is a key feature in the pathogenesis of AAD. Disruption of commensal bacteria of the hindgut allows for pathogen overgrowth and alteration in microbial metabolic function. To date, 16S rRNA sequencing has been used to characterize the effects of penicillin, trimethoprim sulfa, doxycycline, erythromycin, ceftiofur, enrofloxacin, oxytetracycline and metronidazole on the fecal microbiome in healthy horses (Costa et al., 2015; Arnold et al., 2020; Liepman, 2022). Regardless of mechanism of action, antibiotics typically reduce diversity (species richness and evenness) and alter the bacterial community structure of the fecal microbiome, even when animals maintain normal health status and fecal character (Arnold et al., 2021). These effects typically require at least 30 days before the microbiome returns to baseline (Gomez et al, 2023). In horses with colitis, changes in the microbiome are often significant. Horses with AAD demonstrate the most severe disruption of the fecal microbiome compared with horses with Salmonella or undifferentiated colitis. These changes are evident from the phylum to species level, and include important phyla such as Bacteroidetes, Firmicutes, Fibrobacter and Verrucomicrobia (Arnold et al., 2020; Liepman, 2022; Costa et al., 2015). Alterations in the microbiota result in functional metabolic changes that are clinically manifested by diarrhea. Potential changes include alterations in the metabolism of bile acids, carbohydrates including short chain fatty acids, amino acids, lipids and proteins. There is also evidence that antimicrobials increase intestinal permeability via effects on tight junction proteins and by compromising the barrier function provided by the mucus layer between the enterocytes and gut lumen. Recent work comparing horses on antimicrobials that did and did not develop diarrhea confirm that horses with diarrhea have depletion of Verrocomicrobia and metabolites related to gastrointestinal barrier function (Arnold et al., 2021).
148 The equine dermal microbiome: State of the science
Authors: Perry Erin B 
Published: September 2024

Abstract
Equine microbiome research has rapidly moved from a fledgling field to a thriving and productive area of research. Impacts to the equine gastrointestinal microbiome have been examined related to travel, antibiotic administration, meal size, fiber type, breed, sex and nutrient level. Although advances in this field are exciting, data related to the dermal microbiota are sorely lacking. Conducting equine microbiome research presents unique challenges and opportunities. Coordination for data collection in conjunction with other studies will be reviewed. Diet is widely recognized as a significant modulating factor to the microbiome and will be reviewed as a potential consideration in equine dermal microbiome research. This presentation will highlight the limited data available on equine dermal microbiota and identify potential areas for further examination. Studies reporting the characteristics of equine dermal measures will be discussed and gaps in current understanding will be identified. Specific conditions including equine pastern dermatitis as well as wound dressing methods will be examined, and a discussion of future works will be included. Dermatological studies of the microbiome in humans and canines will be examined as a potential map for the future of equine dermal microbiome research. As microbiome research continues to evolve, its impact on equine health has become increasingly apparent. The skin functions as a protective organ and is the first line of defense against pathogenic invasion and immune function support. It is home to bacteria, fungi and viruses with many roles similar to those of the gastrointestinal microbiome. This presentation will highlight the critical need for increased understanding of the dermal microbiome in conjunction with current equine gastrointestinal microbiome studies.
76 Camera vision grading and objective tenderness outcomes of steers fed lubabegron fumarate for the final 56 d of the feeding period
Authors: Wendler Wilsey M , Lawrence Ty , Davis Michael S , Rincker Phil J , Pyatt Nathan , Koers Wally 
Published: September 2024

Abstract
Limited research has compared no beta-agonist, ractopamine and lubabegron in feedlot cattle. We evaluated carcass quality and yield variables using a camera grading instrument and also examined objective tenderness outcomes. Treatments were negative control (no beta-ligand; CON), Optaflexx (ractopamine hydrochloride, 300 mg·steer-1·d-1 for 35 d; OPT), and Experior (lubabegron fumarate, 36 mg·steer-1·d-1 for 56 d + 4 d removal; 0EXP) fed for 198 d. Additional EXP treatments investigated total days on feed (DOF) of 184 d (-14EXP), 212 d (+14EXP) and 226 d (+28EXP). Carcasses (n = 2,517) were instrument graded 24 h post-mortem. Longissimus tenderness and lipid content were evaluated in a subset (n = 361) of carcasses via slice shear force and ether extract. Statistical analyses were conducted using mixed models; pen was the experimental unit, treatment was the fixed effect, block was a random effect, and means were separated with the Tukey-Kramer adjustment. Longissimus muscle area (LMA) was 4.0 to 6.2 cm2 larger (P &lt; 0.01) for steers fed EXP compared with CON, which did not differ from OPT. Weight corrected LMA (LMA:HCW) was 1.3 cm2/100 kg larger (P &lt; 0.01) for -14EXP compared with CON. Marbling score was 31 to 39 points lower (P &lt; 0.01) for -14EXP compared with CON and OPT, whereas 0EXP, +14EXP and +28EXP were similar to CON and OPT. Total number of fat pieces within the longissimus did not differ (P = 0.11) across treatments, however number of fat pieces in the lateral one-half of the longissimus decreased (P ≤ 0.03) for -14EXP and +28EXP, whereas +14EXP tended (P = 0.09) to decrease compared with CON. Total meat area was 3.7 percentage points greater (P &lt; 0.01) for -14EXP compared with CON; +14EXP and +28EXP tended (P = 0.07) to be greater than CON. Total fat area was 1.6 to 1.8 percentage points less (P ≤ 0.02) for 0EXP, +14EXP, and +28EXP when compared with CON. Compared with CON, dorsal-ventral longissimus distance increased (P &lt; 0.01) by 3.3 to 5.4% for -14EXP, 0EXP, +14EXP and +28EXP. Medial-lateral longissimus distance increased 1.9 to 2.5 % (P &lt; 0.01) for +14EXP and +28EXP compared with CON, whereas -14EXP tended (P = 0.08) to increase. Percentage intramuscular fat (IMF) was similar (P ≥ 0.44) for +14EXP, +28EXP, and OPT compared with CON, whereas 0EXP tended (P = 0.09) to be less. Marbling score and IMF were moderately correlated (r = 0.66). Slice shear force values were 20.1% greater (P &lt; 0.02) for +14EXP compared with CON, whereas 0EXP tended (P = 0.09) to be greater and +28EXP, -14EXP and OPT were similar (P ≥ 0.28) to CON. These findings illustrate the effect of EXP on carcass traits and tenderness in feedlot cattle.
137 Possible mechanisms underlying enhanced intramuscular adipogenesis in Wagyu cattle
Authors: Du Min , Fu Xing 
Published: September 2024

Abstract
The quality of beef hinges significantly on the abundance of intramuscular fat and tenderness. Intramuscular fat accumulation results directly from intramuscular adipogenesis, while tenderness is adversely affected by collagenous intramuscular connective tissue. Both intramuscular fat and connective tissue originate from fibro/adipogenic progenitors (FAPs), a group of bipotent progenitors. Wagyu cattle are renowned for their tender beef with rich intramuscular fat, likely owing to the distinctive features of Wagyu FAPs. Our study has identified fewer myogenic cells but more FAPs with greater adipogenic potential in Wagyu compared with Angus muscle. Furthermore, single-cell transcriptomic analysis identified that Wagyu FAPs exhibit greater adipogenic and decreased fibrogenic characteristics compared with FAPs in Brahman cattle, which generally produce low-quality beef with limited intramuscular fat and tenderness. Interestingly, Wagyu muscle also contains more abundant vascular cells, crucial for supporting adipogenesis. Mechanistic studies have unveiled several signaling pathways, including the bone morphogenetic protein signaling and the alternative complement pathway of the complement system, which likely contributes to the heightened adipogenic programming of Wagyu FAPs and is subject to epigenetic regulation.
138 Regulation of post protein translational modification in adipogenesis and fat accumulation in pigs
Authors: Yin Jingdong 
Published: September 2024

Abstract
In this study, we explored the role of protein transcriptional modification (PTM) in the adipogenesis and fat accumulation of intramuscular adipocytes. Intramuscular fat (IMF) is mainly stored in adipocytes interspersed in the perimysial space or within fascicles, and its content is a key factor attributing to meat quality in farm animals, especially in terms of tenderness, flavor and juiciness. The early stage from the fetus to the neonate is crucial for skeletal muscle development involving myogenesis, adipogenesis, and fibrogenesis, and is susceptible to environmental factors. Previous studies have been subjected to explore the molecular mechanism involved in IMF development. However, it was obscured by muscular background of IMF adipocytes. Therefore, we investigated PTM dynamics from three aspects: 1) first analyzed PTM levels of lysine acetylation (Kac), 2-hydroxyisobutyrylation (Khib), crotonylation (Kcr) and succinylation (Ksu) in three distinct differentiation potenctial primary stem cells, including myogenic precursor cells (MPCs), fibro-adipogenic progenitors (FAPs) and MSCs isolated from neonatal longissimus dorsi muscle of pigs within 3-d of age; 2) Comparing the Khib levels of proliferative and differentiated FAPs; and 3) Exploring the role of Khib modification in the adipose tissue of obese- and lean-types of pigs. We found that only Khib level in FAPs was significantly greater than MSCs. During adipogenic differentiation of FAPs, the modification level of Khib was significantly increased quadratically in parallel with protein levels of acylation regulatory enzymes KAT5 (writer) and HDAC2 (Eraser). In comparison of Khib levels in FAPs in proliferation and in differentiation and Khib levels in backfat tissues from obese pigs (Laiwu pigs) and lean pigs (Duroc pigs), we also demonstrated that Khib modification level was positive correlated with adipogenic differentiation and fat accumulation. Accordingly, the expression patterns of KAT5 and HDAC2 were parallel to the degree of lipid accumulation in the backfat adipose tissue of finishing pigs. Furthermore, we showed that KAT5 knockdown in FAPs inhibited adipogenic differentiation, while HDAC2 knockdown enhanced adipogenic differentiation of FAPs. By employing C3H10T1/2 cells, we identified EON1 involved in Khib modification in regulation of adipo gesis and fat accumulation with analysis of Liquid chromatography-tandem mass spectrometry (LC-MS/MS) using the Tandem Mass Tag (TMT Through conditional loss- and gain-of-function mutations, we further demonstrated that khib modification of ENO1 is necessary for preadipocyte differentiation and subsequent fat accumulation by mediating cellular glycolysis. In conclusion, we are the first to reveal the role of Khib modification in adipogenesis and fat deposition in pigs, and provided new clues for the improvement of fat accumulation and distribution via genetic selection and nutritional strategy in pigs.