bluuebunny/crossref_metadata_2025_split huggingface dataset:
Delirium in elderly patients: association with educational attainment
Authors: Martins Sónia , Paiva José Artur , Simões Mário R. , Fernandes Lia 
Published: August 2016

ObjectiveAmong cognitive reserve markers, educational attainment is the most widely studied, with several studies establishing a strong association with risk of dementia. However, it has not yet been fully examined in delirium. This study aims to analyse the relationship between educational attainment and delirium.MethodsThe study included elderly hospitalised patients admitted (≥48 h) into an intermediate care unit (IMCU) of Intensive Care Medicine Service. Exclusion criteria were as follows: Glasgow Coma Scale (total≤11), blindness/deafness, inability to communicate or to speak Portuguese. The European Portuguese Version of the Confusion Assessment Method (CAM) was used for delirium assessment.ResultsThe final sample (n=157) had a mean age of 78.8 (SD=7.6) the majority being female (52.2%), married (51.5%) and with low educational level (49%). According to CAM, 21% of the patients had delirium. The delirium group presented the fewest years of education (median 1 vs. 4), with statistical significance (p=0.003). Delirium was more frequent among male patients [odds ratio (OR) 0.32; 95% confidence interval (CI) 0.12–0.86; p=0.023], as well as those patients with lower education (OR 0.76; 95% CI 0.62–0.95; p=0.016), and with respiratory disease (OR 3.35; 95% CI 1.20–9.33; p=0.020), after controlling for age and medication.ConclusionSimilar to previous studies, these findings point to a negative correlation between education and delirium. This study appears as an attempt to contribute to the knowledge about the role of cognitive reserve in risk of delirium, particularly because is the first one that has been carried out in an IMCU, with lower educated elderly patients. Further studies are needed to clarify this relationship considering other markers (e.g. cognitive activities), which can contribute to the definition of preventive strategies.
World climate suitability projections to 2050 and 2100 for growing oil palm
Authors: PATERSON R. R. M. , KUMAR L. , SHABANI F. , LIMA N. 
Published: August 2016

SUMMARYPalm oil (PO) is a very important commodity used as food, in pharmaceuticals, for cooking and as biodiesel: PO is a major contributor to the economies of many countries, especially Indonesia and Malaysia. Novel tropical regions are being explored increasingly to grow oil palm as current land decreases, whilst recent published modelling studies by the current authors for Malaysia and Indonesia indicate that the climate will become less suitable. Countries that grow the crop commercially include those in Latin America, Africa and Asia. How will climate change (CC) affect the ability to grow oil palm in these countries? Worldwide projections for apt climate were made using Climex software in the present paper and the global area with unsuitable climate was assessed to increase by 6%, whilst highly suitable climate (HSC) decreased by 22% by 2050. The suitability decreases are dramatic by 2100 suggesting regions totally unsuitable for growing OP, which are currently appropriate: the global area with unsuitable climate increased from 154 to 169 million km2 and HSC decreased from 17 to 4 million km2. This second assessment of Indonesia and Malaysia confirmed the original findings by the current authors of large decreases in suitability. Many parts of Latin America and Africa were dramatically decreased: reductions in HSC for Brazil, Columbia and Nigeria are projected to be 119 000, 35 and 1 from 5 000 000, 219 and 69 km2, respectively. However, increases in aptness were observed in 2050 for Paraguay and Madagascar (HSC increases were 90 and 41%, respectively), which were maintained until 2100 (95 and 45%, respectively). Lesser or transient increases were seen for a few other countries. Hot, dry and cold climate stresses upon oil palm for all regions are also provided. These results have negative implications for growing oil palm in countries as: (a) alternatives to Malaysia and Indonesia or (b) economic resources per se. The inability to grow oil palm may assist in amelioration of CC, although the situation is complex. Data suggest a moderate movement of apposite climate towards the poles as previously predicted.
Diversity of helminth parasites in aquatic invertebrate hosts in Latin America: how much do we know?
Authors: Aguirre-Macedo M.L. , May-Tec A.L. , Martínez-Aquino A. , Cremonte F. , Martorelli S.R. 
Published: August 2016

AbstractHelminths in aquatic invertebrate hosts have been overlooked in comparison with vertebrate hosts. Therefore, the known diversity, ecology and distribution of these host–parasite systems are very limited in terms of their taxonomic diversity, habitat and geographic regions. In this study we examined the published literature on helminth parasites of aquatic invertebrates from Latin America and the Caribbean (LAC) to identify the state of the knowledge in the region and to identify patterns of helminth diversity. Results showed that 67% of the literature is from Argentina, Mexico and Brazil. We found records for 772 host–parasite associations. Most records relate to medically or economically important hosts. Molluscs were the most studied host group with 377 helminth records (80% trematodes). The lymnaeids and planorbids were the most studied molluscs across LAC. Arthropods were the second most studied host group with 78 helminth records (trematodes 38%, cestodes 24% and nematodes 20%), with shrimps and crabs being the most studied hosts. Host species with the largest number of helminth taxa were those with a larger sampling effort through time, usually in a small country region. No large geographical-scale studies were identified. In general, the knowledge is still too scarce to allow any zoogeographical or helminth diversity generalization, as most hosts have been studied locally and the studies on invertebrate hosts in LAC are substantially uneven among countries.
RICHARD WAGNER AND THE GERMAN NATION
Authors: Blanning Tim 
Published: August 2016

ABSTRACTRichard Wagner's relationship with the German nation was inconsistent and often contradictory, veering between pride and distaste. One constant feature, however, was his intense hostility to the German princes. He held them responsible for the decline of German culture after the Reformation and, more especially, after the Thirty Years War. Their imitation of Italian and French models amounted to cultural treason in his view. The great revival of the ‘German spirit’ in the eighteenth century, he asserted with characteristic vehemence, came from the common people. It was they too who rose in revolt against Napoleonic tyranny in the great ‘War of Liberation’ of 1813–15. Yet once again the princes betrayed them, restoring despotic rule once the French yoke had been removed and resuming the patronage of French plays and Italian operas. In forming this narrative, Wagner was strongly influenced by Friedrich Schiller, who ranks with Shakespeare and Beethoven in his rather limited pantheon. It found its way into several of his music dramas, most explicitly in The Mastersingers of Nuremberg, whose political message has often been misunderstood.
Cell-permeable succinate prodrugs bypass mitochondrial complex I deficiency
Authors: Ehinger Johannes K. , Piel Sarah , Ford Rhonan , Karlsson Michael , Sjövall Fredrik , Frostner Eleonor Åsander , Morota Saori , Taylor Robert W. , Turnbull Doug M. , Cornell Clive , Moss Steven J. , Metzsch Carsten , Hansson Magnus J. , Fliri Hans , Elmér Eskil 
Published: August 2016

AbstractMitochondrial complex I (CI) deficiency is the most prevalent defect in the respiratory chain in paediatric mitochondrial disease. This heterogeneous group of diseases includes serious or fatal neurological presentations such as Leigh syndrome and there are very limited evidence-based treatment options available. Here we describe that cell membrane-permeable prodrugs of the complex II substrate succinate increase ATP-linked mitochondrial respiration in CI-deficient human blood cells, fibroblasts and heart fibres. Lactate accumulation in platelets due to rotenone-induced CI inhibition is reversed and rotenone-induced increase in lactate:pyruvate ratio in white blood cells is alleviated. Metabolomic analyses demonstrate delivery and metabolism of [13C]succinate. In Leigh syndrome patient fibroblasts, with a recessive NDUFS2 mutation, respiration and spare respiratory capacity are increased by prodrug administration. We conclude that prodrug-delivered succinate bypasses CI and supports electron transport, membrane potential and ATP production. This strategy offers a potential future therapy for metabolic decompensation due to mitochondrial CI dysfunction.
A nickel iron diselenide-derived efficient oxygen-evolution catalyst
Authors: Xu Xiang , Song Fang , Hu Xile 
Published: August 2016

AbstractEfficient oxygen-evolution reaction catalysts are required for the cost-effective generation of solar fuels. Metal selenides have been reported as promising oxygen-evolution catalysts; however, their active forms are yet to be elucidated. Here we show that a representative selenide catalyst, nickel selenide, is entirely converted into nickel hydroxide under oxygen-evolution conditions. This result indicates that metal selenides are unstable during oxygen evolution, and the in situ generated metal oxides are responsible for their activity. This knowledge inspired us to synthesize nanostructured nickel iron diselenide, a hitherto unknown metal selenide, and to use it as a templating precursor to a highly active nickel iron oxide catalyst. This selenide-derived oxide catalyses oxygen evolution with an overpotential of only 195 mV for 10 mA cm−2. Our work underscores the importance of identifying the active species of oxygen-evolution catalysts, and demonstrates how such knowledge can be applied to develop better catalysts.
Effects of race and sex on cerebral hemodynamics, oxygen delivery and blood flow distribution in response to high altitude
Authors: Liu Jie , Liu Yang , Ren Li-hua , Li Li , Wang Zhen , Liu Shan-shan , Li Su-zhi , Cao Tie-sheng 
Published: August 2016

AbstractTo assess racial, sexual and regional differences in cerebral hemodynamic response to high altitude (HA, 3658 m). We performed cross-sectional comparisons on total cerebral blood flow (TCBF = sum of bilateral internal carotid and vertebral arterial blood flows = QICA + QVA), total cerebrovascular resistance (TCVR), total cerebral oxygen delivery (TCOD) and QVA/TCBF (%), among six groups of young healthy subjects: Tibetans (2-year staying) and Han (Han Chinese) at sea level, Han (2-day, 1-year and 5-year) and Tibetans at HA. Bilateral ICA and VA diameters and flow velocities were derived from duplex ultrasonography; and simultaneous measurements of arterial pressure, oxygen saturation and hemoglobin concentration were conducted. Neither acute (2-day) nor chronic (>1 year) responses showed sex differences in Han, except that women showed lower TCOD compared with men. Tibetans and Han exhibited different chronic responses (percentage alteration relative to the sea-level counterpart value) in TCBF (−17% vs. 0%), TCVR (22% vs. 12%), TCOD (0% vs. 10%) and QVA/TCBF (0% vs. 2.4%, absolute increase), with lower resting TCOD found in SL- and HA-Tibetans. Our findings indicate racial but not sex differences in cerebral hemodynamic adaptations to HA, with Tibetans (but not Han) demonstrating an altitude-related change of CBF distribution.
Extremely heat tolerant photo-symbiosis in a shallow marine benthic foraminifera
Authors: Schmidt C. , Titelboim D. , Brandt J. , Herut B. , Abramovich S. , Almogi-Labin A. , Kucera M. 
Published: August 2016

AbstractBleaching, the loss of algal symbionts, occurs in marine photosymbiotic organisms at water temperatures minimally exceeding average summer SST (sea surface temperatures). Pre-adaptation allows organisms to persist under warmer conditions, providing the tolerance can be carried to new habitats. Here we provide evidence for the existence of such adaptation in the benthic foraminifera Pararotalia calcariformata. This species occurs at a thermally polluted site in the Mediterranean, where water temperatures reach a maxima daily average of 36 °C during the summer. To test whether this occurrence represents a widespread adaptation, we conducted manipulative experiments exposing this species from an unpolluted site to elevated temperatures (20–42 °C). It was kept in co-culture with the more thermally sensitive foraminifera Amphistegina lobifera in two experiments (20–36 °C). Reduced photosynthetic activity in A. lobifera occurred at 32 °C whereas photochemical stress in P. calcariformata was first observed during exposure to 36 °C. Pararotalia calcariformata survived all treatment conditions and grew under 36 °C. The photosymbiosis in P. calcariformata is unusually thermally tolerant. These observations imply that marine eukaryote-eukaryote photosymbiosis can respond to elevated temperatures by drawing on a pool of naturally occurring pre-adaptations. It also provides a perspective on the massive occurrence of symbiont-bearing foraminifera in the early Cenozoic hothouse climate.
Precise Tuning of Facile One-Pot Gelatin Methacryloyl (GelMA) Synthesis
Authors: Shirahama Hitomi , Lee Bae Hoon , Tan Lay Poh , Cho Nam-Joon 
Published: August 2016

AbstractGelatin-methacryloyl (GelMA) is one of the most commonly used photopolymerizable biomaterials in bio-applications. However, GelMA synthesis remains suboptimal, as its reaction parameters have not been fully investigated. The goal of this study is to establish an optimal route for effective and controllable GelMA synthesis by systematically examining reaction parameters including carbonate-bicarbonate (CB) buffer molarity, initial pH adjustment, MAA concentration, gelatin concentration, reaction temperature, and reaction time. We employed several analytical techniques in order to determine the degree of substitution (DS) and conducted detailed structural analysis of the synthesized polymer. The results enabled us to optimize GelMA synthesis, showing the optimal conditions to balance the deprotonation of amino groups with minimizing MAA hydrolysis, which led to nearly complete substitution. The optimized conditions (low feed ratio of MAA to gelatin (0.1 mL/g), 0.25 M CB buffer at pH 9, and a gelatin concentration of 10–20%) enable a simplified reaction scheme that produces GelMA with high substitution with just one-step addition of MAA in one pot. Looking forward, these optimal conditions not only enable facile one-pot GelMA synthesis but can also guide researchers to explore the efficient, high methacrylation of other biomacromolecules.
Repositioning organohalogen drugs: a case study for identification of potent B-Raf V600E inhibitors via docking and bioassay
Authors: Li Yisu , Guo Binbin , Xu Zhijian , Li Bo , Cai Tingting , Zhang Xinben , Yu Yuqi , Wang Heyao , Shi Jiye , Zhu Weiliang 
Published: August 2016

AbstractDrug repositioning has been attracting increasingly attention for its advantages of reducing costs and risks. Statistics showed that around one quarter of the marketed drugs are organohalogens. However, no study has been reported, to the best of our knowledge, to aim at efficiently repositioning organohalogen drugs, which may be attributed to the lack of accurate halogen bonding scoring function. Here, we present a study to show that two organohalogen drugs were successfully repositioned as potent B-Raf V600E inhibitors via molecular docking with halogen bonding scoring function, namely D3DOCKxb developed in our lab, and bioassay. After virtual screening by D3DOCKxb against the database CMC (Comprehensive Medicinal Chemistry), 3 organohalogen drugs that were predicted to form strong halogen bonding with B-Raf V600E were purchased and tested with ELISA-based assay. In the end, 2 of them, rafoxanide and closantel, were identified as potent inhibitors with IC50 values of 0.07 μM and 1.90 μM, respectively, which are comparable to that of vemurafenib (IC50: 0.17 μM), a marketed drug targeting B-Raf V600E. Single point mutagenesis experiments confirmed the conformations predicted by D3DOCKxb. And comparison experiment revealed that halogen bonding scoring function is essential for repositioning those drugs with heavy halogen atoms in their molecular structures.
Detecting the Biopolymer Behavior of Graphene Nanoribbons in Aqueous Solution
Authors: Wijeratne Sithara S. , Penev Evgeni S. , Lu Wei , Li Jingqiang , Duque Amanda L. , Yakobson Boris I. , Tour James M. , Kiang Ching-Hwa 
Published: August 2016

AbstractGraphene nanoribbons (GNR), can be prepared in bulk quantities for large-area applications by reducing the product from the lengthwise oxidative unzipping of multiwalled carbon nanotubes (MWNT). Recently, the biomaterials application of GNR has been explored, for example, in the pore to be used for DNA sequencing. Therefore, understanding the polymer behavior of GNR in solution is essential in predicting GNR interaction with biomaterials. Here, we report experimental studies of the solution-based mechanical properties of GNR and their parent products, graphene oxide nanoribbons (GONR). We used atomic force microscopy (AFM) to study their mechanical properties in solution and showed that GNR and GONR have similar force-extension behavior as in biopolymers such as proteins and DNA. The rigidity increases with reducing chemical functionalities. The similarities in rigidity and tunability between nanoribbons and biomolecules might enable the design and fabrication of GNR-biomimetic interfaces.
Fetal Bovine Serum RNA Interferes with the Cell Culture derived Extracellular RNA
Authors: Wei Zhiyun , Batagov Arsen O. , Carter David R. F. , Krichevsky Anna M. 
Published: August 2016

AbstractFetal bovine serum (FBS) has been used in eukaryotic cell cultures for decades. However, little attention has been paid to the biological effects associated with RNA content of FBS on cell cultures. Here, using RNA sequencing, we demonstrate that FBS contains a diverse repertoire of protein-coding and regulatory RNA species, including mRNA, miRNA, rRNA and snoRNA. The majority of them (>70%) are retained even after extended ultracentrifugation in the preparations of vesicle-depleted FBS (vdFBS) commonly utilized in the studies of extracellular vesicles (EV) and intercellular communication. FBS-associated RNA is co-isolated with cell-culture derived extracellular RNA (exRNA) and interferes with the downstream RNA analysis. Many evolutionally conserved FBS-derived RNA species can be falsely annotated as human or mouse transcripts. Notably, specific miRNAs abundant in FBS, such as miR-122, miR-451a and miR-1246, have been previously reported as enriched in cell-culture derived EVs, possibly due to the confounding effect of the FBS. Analysis of publically available exRNA datasets supports the notion of FBS contamination. Furthermore, FBS transcripts can be taken up by cultured cells and affect the results of highly sensitive gene expression profiling technologies. Therefore, precautions for experimental design are warranted to minimize the interference and misinterpretations caused by FBS-derived RNA.
Neuoroprotective efficacies by KUS121, a VCP modulator, on animal models of retinal degeneration
Authors: Hasegawa Tomoko , Muraoka Yuki , Ikeda Hanako Ohashi , Tsuruyama Tatsuaki , Kondo Mineo , Terasaki Hiroko , Kakizuka Akira , Yoshimura Nagahisa 
Published: August 2016

AbstractRetinitis pigmentosa (RP) is one of the leading causes of adult blindness and has no established therapy. We have shown that valosin-containing protein (VCP) modulators, Kyoto University Substances (KUSs), ameliorated abnormally low ATP levels by inhibiting the ATPase of VCP, thereby protected several types of cells, including retinal neurons, from cell death-inducing insults. In this study, we found that KUS121, one of the VCP modulators, effectively protects photoreceptors both morphologically and functionally, in two animal models of retinal degeneration, rd12 mice and RP rabbits with a rhodopsin (Pro347Leu) mutation. In rd12 mice, KUS121 suppressed the loss of photoreceptors, not only rods but also cones, as well as the visual function deterioration. Significant protective effects existed even when the medication was started in later stages of the disease. In RP rabbits, KUS121 suppressed thinning of the outer nuclear layer and maintained visual function. In the retinas treated with KUS121, suppression of endoplasmic reticulum stress, activation of mammalian target of rapamycin and suppression of disease-associated apoptosis were evident. The ability of KUS121 to protect photoreceptors, especially cones, even in later stages of the disease may contribute to the preservation of central vision in RP patients, which is important for quality of vision.
Robust phase retrieval for high resolution edge illumination x-ray phase-contrast computed tomography in non-ideal environments
Authors: Zamir Anna , Endrizzi Marco , Hagen Charlotte K. , Vittoria Fabio A. , Urbani Luca , De Coppi Paolo , Olivo Alessandro 
Published: August 2016

AbstractEdge illumination x-ray phase contrast tomography is a recently developed imaging technique which enables three-dimensional visualisation of low-absorbing materials. Dedicated phase retrieval algorithms can provide separate computed tomography (CT) maps of sample absorption, refraction and scattering properties. In this paper we propose a novel “modified local retrieval” method which is capable of accurately retrieving sample properties in a range of realistic, non-ideal imaging environments. These include system misalignment, defects in the used optical elements and system geometry variations over time due to vibrations or temperature fluctuations. System instabilities were analysed, modelled and incorporated into a simulation study. As a result, an additional modification was introduced to the retrieval procedure to account for changes in the imaging system over time, as well as local variations over the field of view. The performance of the proposed method was evaluated in comparison to a previously used “global retrieval” method by applying both approaches to experimental CT data of a rat’s heart acquired in a non-ideal environment. The use of the proposed method resulted in the removal of major artefacts, leading to a significant improvement in image quality. This method will therefore enable acquiring high-resolution, reliable CT data of large samples in realistic settings.