bluuebunny/crossref_metadata_2025_split huggingface dataset:
Active matter logic for autonomous microfluidics
Authors: Woodhouse Francis G. , Dunkel Jörn 
Published: April 2017

AbstractChemically or optically powered active matter plays an increasingly important role in materials design, but its computational potential has yet to be explored systematically. The competition between energy consumption and dissipation imposes stringent physical constraints on the information transport in active flow networks, facilitating global optimization strategies that are not well understood. Here, we combine insights from recent microbial experiments with concepts from lattice-field theory and non-equilibrium statistical mechanics to introduce a generic theoretical framework for active matter logic. Highlighting conceptual differences with classical and quantum computation, we demonstrate how the inherent non-locality of incompressible active flow networks can be utilized to construct universal logical operations, Fredkin gates and memory storage in set–reset latches through the synchronized self-organization of many individual network components. Our work lays the conceptual foundation for developing autonomous microfluidic transport devices driven by bacterial fluids, active liquid crystals or chemically engineered motile colloids.
Serum MicroRNAs Reflect Injury Severity in a Large Animal Model of Thoracic Spinal Cord Injury
Authors: Tigchelaar Seth , Streijger Femke , Sinha Sunita , Flibotte Stephane , Manouchehri Neda , So Kitty , Shortt Katelyn , Okon Elena , Rizzuto Michael A. , Malenica Ivana , Courtright-Lim Amanda , Eisen Andrew , Keuren-Jensen Kendall Van , Nislow Corey , Kwon Brian K. 
Published: April 2017

AbstractTherapeutic development for spinal cord injury is hindered by the difficulty in conducting clinical trials, which to date have relied solely on functional outcome measures for patient enrollment, stratification, and evaluation. Biological biomarkers that accurately classify injury severity and predict neurologic outcome would represent a paradigm shift in the way spinal cord injury clinical trials could be conducted. MicroRNAs have emerged as attractive biomarker candidates due to their stability in biological fluids, their phylogenetic similarities, and their tissue specificity. Here we characterized a porcine model of spinal cord injury using a combined behavioural, histological, and molecular approach. We performed next-generation sequencing on microRNAs in serum samples collected before injury and then at 1, 3, and 5 days post injury. We identified 58, 21, 9, and 7 altered miRNA after severe, moderate, and mild spinal cord injury, and SHAM surgery, respectively. These data were combined with behavioural and histological analysis. Overall miRNA expression at 1 and 3 days post injury strongly correlates with outcome measures at 12 weeks post injury. The data presented here indicate that serum miRNAs are promising candidates as biomarkers for the evaluation of injury severity for spinal cord injury or other forms of traumatic, acute, neurologic injury.
Composition and temperature dependence of self-diffusion in Si1−x Ge x alloys
Authors: Saltas Vassilis , Chroneos Alexander , Vallianatos Filippos 
Published: April 2017

AbstractThe knowledge of diffusion processes in semiconducting alloys is very important both technologically and from a theoretical point of view. Here we show that, self-diffusion in Si1−xGexalloys as a function of temperature and Ge concentration can be described by thecBΩthermodynamic model. This model connects the activation Gibbs free energy of point defects formation and migration with the elastic and expansion properties of the bulk material. The approach allows the systematic investigation of point defect thermodynamic parameters such as activation enthalpy, activation entropy and activation volume, based on the thermo-elastic properties (bulk modulus and its derivatives, mean atomic volume and thermal expansion coefficient) of the two end-members of the Si1−xGexalloy. Considerable deviations from Vegard’s law are observed, due to the diversification of the bulk properties of Si and Ge, in complete agreement with the available experimental data.
In-Vivo Efficacy of Chloroquine to Clear Asymptomatic Infections in Mozambican Adults: A Randomized, Placebo-controlled Trial with Implications for Elimination Strategies
Authors: Galatas Beatriz , Nhamussua Lidia , Candrinho Baltazar , Mabote Lurdes , Cisteró Pau , Gupta Himanshu , Rabinovich Regina , Menéndez Clara , Macete Eusebio , Saute Francisco , Mayor Alfredo , Alonso Pedro , Bassat Quique , Aide Pedro 
Published: April 2017

AbstractRecent reports regarding the re-emergence of parasite sensitivity to chloroquine call for a new consideration of this drug as an interesting complementary tool in malaria elimination efforts, given its good safety profile and long half-life. A randomized (2:1), single-blind, placebo-controlled trial was conducted in Manhiça, Mozambique, to assess the in-vivo efficacy of chloroquine to clear plasmodium falciparum (Pf) asymptomatic infections. Primary study endpoint was the rate of adequate and parasitological response (ACPR) to therapy on day 28 (PCR-corrected). Day 0 isolates were analyzed to assess the presence of the PfCRT-76T CQ resistance marker. A total of 52 and 27 male adults were included in the CQ and Placebo group respectively. PCR-corrected ACPR was significantly higher in the CQ arm 89.4% (95%CI 80–98%) compared to the placebo (p < 0.001). CQ cleared 49/50 infections within the first 72 h while placebo cleared 12/26 (LRT p < 0.001). The PfCRT-76T mutation was present only in one out of 108 (0.9%) samples at baseline, well below the 84% prevalence found in 1999 in the same area. This study presents preliminary evidence of a return of chloroquine sensitivity in Mozambican Pf isolates, and calls for its further evaluation in community-based malaria elimination efforts, in combination with other effective anti-malarials. Trial registration: www.clinicalTrials.gov NCT02698748.
Non-invasive measurement of a metabolic marker of infant brain function
Authors: Siddiqui Maheen F. , Lloyd-Fox Sarah , Kaynezhad Pardis , Tachtsidis Ilias , Johnson Mark H. , Elwell Clare E. 
Published: April 2017

AbstractWhile near-infrared spectroscopy (NIRS) haemodynamic measures have proven to be vastly useful in investigating human brain development, the haemodynamic response function (HRF) in infants is not yet fully understood. NIRS measurements of the oxidation state of mitochondrial enzyme cytochrome-c-oxidase (oxCCO) have the potential to yield key information about cellular oxygen utilisation and therefore energy metabolism. We used a broadband NIRS system to measure changes in oxCCO, in addition to haemodynamic changes, during functional activation in a group of 33 typically developing infants aged between 4 and 6 months. The responses were recorded over the right temporal lobe while the infants were presented with engaging videos containing social content. A significant increase in oxCCO was found in response to the social stimuli, with maximum increase of 0.238 ± 0.13 μM. These results are the first reported significant change in oxCCO in response to stimulus-evoked activation in human infants and open new vistas for investigating human infant brain function and its energy metabolism.
Neural connectivity in Internet gaming disorder and alcohol use disorder: A resting-state EEG coherence study
Authors: Park Su Mi , Lee Ji Yoon , Kim Yeon Jin , Lee Jun-Young , Jung Hee Yeon , Sohn Bo Kyung , Kim Dai Jin , Choi Jung-Seok 
Published: April 2017

AbstractThe present study compared neural connectivity and the level of phasic synchronization between neural populations in patients with Internet gaming disorder (IGD), patients with alcohol use disorder (AUD), and healthy controls (HCs) using resting-state electroencephalography (EEG) coherence analyses. For this study, 92 adult males were categorized into three groups: IGD (n = 30), AUD (n = 30), and HC (n = 32). The IGD group exhibited increased intrahemispheric gamma (30–40 Hz) coherence compared to the AUD and HC groups regardless of psychological features (e.g., depression, anxiety, and impulsivity) and right fronto-central gamma coherence positively predicted the scores of the Internet addiction test in all groups. In contrast, the AUD group showed marginal tendency of increased intrahemispheric theta (4–8 Hz) coherence relative to the HC group and this was dependent on the psychological features. The present findings indicate that patients with IGD and AUD exhibit different neurophysiological patterns of brain connectivity and that an increase in the fast phasic synchrony of gamma coherence might be a core neurophysiological feature of IGD.
Circulating VEGF and eNOS variations as predictors of outcome in metastatic colorectal cancer patients receiving bevacizumab
Authors: Marisi Giorgia , Scarpi Emanuela , Passardi Alessandro , Nanni Oriana , Ragazzini Angela , Valgiusti Martina , Casadei Gardini Andrea , Neri Luca Maria , Frassineti Giovanni Luca , Amadori Dino , Ulivi Paola 
Published: April 2017

AbstractNovel predictive biomarkers are needed to improve patient selection and optimize the use of bevacizumab (B) in metastatic colorectal cancer. We analyzed the potential of five circulating biomarkers to predict B efficacy and monitor response. Peripheral blood samples collected at baseline, at the first clinical evaluation and at progression were available for 129 patients enrolled in the prospective multicentric ITACa trial and randomized to receive FOLFOX4/FOLFIRI (CT) with (64 patients) or without B (65 patients). VEGF-A, eNOS, EPHB4, COX2 and HIF-1α mRNA levels were measured by qRT-PCR. Baseline marker expression levels and their modulation during therapy were analyzed in relation to objective response, progression-free survival and overall survival (OS). VEGF and eNOS expression was significantly correlated in both groups (Spearman’s correlation coefficient = 0.80; P < 0.0001 and 0.75; P < 0.0001, respectively). B-treated patients with >30% reduction in eNOS and VEGF levels from baseline to the first clinical evaluation showed better OS than the others (median OS 31.6 months, 95% CI 21.3–49.5 months and median OS 14.4 months, 95% CI 9.0–22.7 months, respectively, HR 0.38, 95% CI 0.19–0.78, P = 0.008). A reduction in eNOS and VEGF expression from baseline to the first clinical evaluation may indicate a response to B.
Microstructure and nanoindentation behavior of Cu composites reinforced with graphene nanoplatelets by electroless co-deposition technique
Authors: Zhang Qi , Qin Zhenbo , Luo Qin , Wu Zhong , Liu Lei , Shen Bin , Hu Wenbin 
Published: April 2017

AbstractA reduced graphene oxide/copper (RGO/Cu) composite was fabricated by a surfactant free, electroless co-deposition technique. The graphene oxide (GO) sheets were reduced and RGO homogeneous distributed into the copper matrix. On the basis of nanoindentation, the presence of RGO and the increase of its content in matrix significantly raised the hardness of RGO/Cu composites. Here, the relevant strengthening effect and mechanisms involved in RGO-reinforced Cu composites were systematically evaluated. Especially, the addition of RGO in Cu matrix led to the compressive micro-strain, and the resulted distortion of the lattice parameter was calculated based on Cohen’s method. However, excessive addition of GO in the electrolyte could decrease the mechanical performance due to agglomeration of RGO. Apparently, the optimal concentration for GO dispersion in co-deposition solution was deserved to discuss. After a serious of relative experiments, we could get a conclusion that this method provided a new pathway for embedded graphene into the metal matrix to improve the mechanical properties of RGO-reinforced materials.
Nerve growth factor signalling in pathology and regeneration of human teeth
Authors: Mitsiadis Thimios A. , Magloire Henry , Pagella Pierfrancesco 
Published: April 2017

AbstractNerve growth factor (NGF) is a key regulator of the development and differentiation of neuronal and non-neuronal cells. In the present study we examined the distribution of NGF and its low and high-affinity receptors, p75NTR and TrkA respectively, in permanent human teeth under normal and pathological conditions. In intact functional teeth, NGF, p75NTR and TrkA are weakly expressed in dental pulp fibroblasts and odontoblasts that are responsible for dentine formation, while the NGF and p75NTR molecules are strongly expressed in nerve fibres innervating the dental pulp. In carious and injured teeth NGF and TrkA expression is upregulated in a selective manner in odontoblasts surrounding the injury sites, indicating a link between NGF signalling and dental tissue repair events. Accordingly, NGF and TrkA expression is strongly upregulated in cultured primary human dental mesenchymal cells during their differentiation into odontoblasts. Targeted release of NGF in cultured human tooth slices induced extensive axonal growth and migration of Schwann cells towards the NGF administration site. These results show that NGF signalling is strongly linked to pathological and regenerative processes in human teeth and suggest a potential role for this neurotrophic molecule in pulp regeneration.
The mechanism of iron binding processes in erionite fibres
Authors: Pacella Alessandro , Cremisini Carlo , Nardi Elisa , Montereali Maria Rita , Pettiti Ida , Ballirano Paolo 
Published: April 2017

AbstractFibrous erionite-Na from Rome (Oregon, USA) was K-exchanged and characterized from the structural point of view. In addition, the modifications experienced after contact with a Fe(II) source were investigated for evaluating if the large potassium ions, blocking off nearly all the erionite cavity openings, might prevent the Fe(II) binding process, which is currently assumed to be one of the reasons of the toxicity of erionite. The K-exchanged sample had a 95% reduction of the BET surface area indicating that it behaves as a mesoporous material. Exchanged K is segregated at K2 and at OW sites commonly occupied by H2O. The latter K cations provide a relevant contribution to the reduction of the surface area. Surprisingly, despite the collapse of its surface area the sample preserves the tendency to bind Fe(II). Therefore, yet in the case of a peculiar and potentially hostile structural environment the Fe(II) ion-exchange process has essentially the same kinetics observed in a typical erionite sample. This is a clear evidence of the very limited effect of the chemical composition of erionite on the Fe(II) binding process and reasonably it does not play a significant role in its toxicity.
Fusing atomic W states via quantum Zeno dynamics
Authors: Ji Y. Q. , Shao X. Q. , Yi X. X. 
Published: April 2017

AbstractWe propose a scheme for preparation of large-scale entangled W states based on the fusion mechanism via quantum Zeno dynamics. By sending two atoms belonging to an n-atom W state and an m-atom W state, respectively, into a vacuum cavity (or two separate cavities), we may obtain a (n + m − 2)-atom W state via detecting the two-atom state after interaction. The present scheme is robust against both spontaneous emission of atoms and decay of cavity, and the feasibility analysis indicates that it can also be realized in experiment.
The role of hydrophobicity in tuberculosis evolution and pathogenicity
Authors: Jankute Monika , Nataraj Vijayashankar , Lee Oona Y. -C. , Wu Houdini H. T. , Ridell Malin , Garton Natalie J. , Barer Michael R. , Minnikin David E. , Bhatt Apoorva , Besra Gurdyal S. 
Published: April 2017

AbstractThe evolution of tubercle bacilli parallels a route from environmental Mycobacterium kansasii, through intermediate “Mycobacterium canettii”, to the modern Mycobacterium tuberculosis complex. Cell envelope outer membrane lipids change systematically from hydrophilic lipooligosaccharides and phenolic glycolipids to hydrophobic phthiocerol dimycocerosates, di- and pentaacyl trehaloses and sulfoglycolipids. Such lipid changes point to a hydrophobic phenotype for M. tuberculosis sensu stricto. Using Congo Red staining and hexadecane-aqueous buffer partitioning, the hydrophobicity of rough morphology M. tuberculosis and Mycobacterium bovis strains was greater than smooth “M. canettii” and M. kansasii. Killed mycobacteria maintained differential hydrophobicity but defatted cells were similar, indicating that outer membrane lipids govern overall hydrophobicity. A rough M. tuberculosis H37Rv ΔpapA1 sulfoglycolipid-deficient mutant had significantly diminished Congo Red uptake though hexadecane-aqueous buffer partitioning was similar to H37Rv. An M. kansasii, ΔMKAN27435 partially lipooligosaccharide-deficient mutant absorbed marginally more Congo Red dye than the parent strain but was comparable in partition experiments. In evolving from ancestral mycobacteria, related to “M. canettii” and M. kansasii, modern M. tuberculosis probably became more hydrophobic by increasing the proportion of less polar lipids in the outer membrane. Importantly, such a change would enhance the capability for aerosol transmission, affecting virulence and pathogenicity.
Shorter lifetime of a soil invertebrate species when exposed to copper oxide nanoparticles in a full lifespan exposure test
Authors: Gonçalves Micael F. M. , Gomes Susana I. L. , Scott-Fordsmand Janeck J. , Amorim Mónica J. B. 
Published: April 2017

AbstractToxicity tests that last the all life duration of the organisms are not common, instead, long-term tests usually include one reproductive cycle. In the present study we optimized and propose a lifespan (all life) term test usingEnchytraeus crypticus(Oligochaeta). The effect of copper oxide nanoparticles (CuO-NPs) was assessed in this lifespan test and compared to copper salt (CuCl2), using the same effect concentrations on reproduction (EC50). Monitored endpoints included survival and reproduction over-time (202 days). Results from survival showed that CuO-NPs caused shorter life of the adults compared to CuCl2(control LT50: 218 days > CuCl2LT50: 175 days > CuO-NPs LT50: 145 days). The effect was even more amplified in terms of reproduction (control ET50: 158 days > CuCl2ET50: 138 days > CuO-NPs ET50: 92 days). Results suggest that CuO-NPs may cause a higher Cu effect via atrojan horsemechanism. The use of lifespan tests brings a novel concept in soil ecotoxicity, the longevity. This is a particularly important aspect when the subject is nanomaterials toxicity, where longer term exposure time is expected to reveal unpredicted effects via the current short/long-term tests. The present study confirms this higher effect for CuO-NPs.
Microplastic transport in soil by earthworms
Authors: Rillig Matthias C. , Ziersch Lisa , Hempel Stefan 
Published: April 2017

AbstractDespite great general benefits derived from plastic use, accumulation of plastic material in ecosystems, and especially microplastic, is becoming an increasing environmental concern. Microplastic has been extensively studied in aquatic environments, with very few studies focusing on soils. We here tested the idea that microplastic particles (polyethylene beads) could be transported from the soil surface down the soil profile via earthworms. We used Lumbricus terrestris L., an anecic earthworm species, in a factorial greenhouse experiment with four different microplastic sizes. Presence of earthworms greatly increased the presence of microplastic particles at depth (we examined 3 soil layers, each 3.5 cm deep), with smaller PE microbeads having been transported downward to a greater extent. Our study clearly shows that earthworms can be significant transport agents of microplastics in soils, incorporating this material into soil, likely via casts, burrows (affecting soil hydraulics), egestion and adherence to the earthworm exterior. This movement has potential consequences for exposure of other soil biota to microplastics, for the residence times of microplastic at greater depth, and for the possible eventual arrival of microplastics in the groundwater.
Impact of molybdenum out diffusion and interface quality on the performance of sputter grown CZTS based solar cells
Authors: Dalapati Goutam Kumar , Zhuk Siarhei , Masudy-Panah Saeid , Kushwaha Ajay , Seng Hwee Leng , Chellappan Vijila , Suresh Vignesh , Su Zhenghua , Batabyal Sudip Kumar , Tan Cheng Cheh , Guchhait Asim , Wong Lydia Helena , Wong Terence Kin Shun , Tripathy Sudhiranjan 
Published: April 2017

AbstractWe have investigated the impact of Cu2ZnSnS4-Molybdenum (Mo) interface quality on the performance of sputter-grown Cu2ZnSnS4 (CZTS) solar cell. Thin film CZTS was deposited by sputter deposition technique using stoichiometry quaternary CZTS target. Formation of molybdenum sulphide (MoSx) interfacial layer is observed in sputter grown CZTS films after sulphurization. Thickness of MoSx layer is found ~142 nm when CZTS layer (550 nm thick) is sulphurized at 600 °C. Thickness of MoSx layer significantly increased to ~240 nm in case of thicker CZTS layer (650 nm) under similar sulphurization condition. We also observe that high temperature (600 °C) annealing suppress the elemental impurities (Cu, Zn, Sn) at interfacial layer. The amount of out-diffused Mo significantly varies with the change in sulphurization temperature. The out-diffused Mo into CZTS layer and reconstructed interfacial layer remarkably decreases series resistance and increases shunt resistance of the solar cell. The overall efficiency of the solar cell is improved by nearly five times when 600 °C sulphurized CZTS layer is applied in place of 500 °C sulphurized layer. Molybdenum and sulphur diffusion reconstruct the interface layer during heat treatment and play the major role in charge carrier dynamics of a photovoltaic device.
Upconversion Modulation through Pulsed Laser Excitation for Anti-counterfeiting
Authors: Han Yingdong , Li Hongyu , Wang Yangbo , Pan Yue , Huang Ling , Song Feng , Huang Wei 
Published: April 2017

AbstractLanthanide-doped upconversion nanomaterials are emerging as promising candidates in optoelectronics, volumetric display, anti-counterfeiting as well as biological imaging and therapy. Typical modulations of upconversion through chemical methods, such as controlling phase, composition, morphology and size enable us to rationally manipulate emission profiles and lifetimes of lanthanide ions by using continuous-wave laser excitation. Here we demonstrate that under pulsed laser excitation the emission color of NaYF4:Er/Tm (2/0.5%)@NaYF4 core-shell nanoparticles has an obvious transformation from green to red colors. Moreover, both pulse duration and repetition frequency are responsible for manipulating the upconversion emission color. The mechanism of the phenomena may be that the pulsed laser sequence triggers the emission levels to non-steady upconversion states first, and then cuts off the unfinished population process within the pulse duration. This pump source dependent and resultant tunable fluorescence emission enables NaYF4:Er/Tm (2/0.5%)@NaYF4 nanoparticles as a promising fluorophore in the transparent anti-fake printing.