bluuebunny/crossref_metadata_2025_split huggingface dataset:
Flexible screen-printed supercapacitors with asymmetric PANI/CDC–AC electrodes and aqueous electrolyte
Authors: Kattainen Aapo , Keskinen Jari , Punkari Timo , Inci Yesilyurt Ezgi , Mäntysalo Matti 
Published: September 2024

Abstract
We report the fabrication and electrical performance of screen-printed flexible supercapacitors (SCs) based on activated carbon (AC) and polyaniline (PANI)/carbide-derived carbon (CDC) composite electrodes, and neutral aqueous electrolytes. The devices are entirely constructed from safe, low-cost, and non-toxic materials, fabricated through a mass production capable screen printing process, and fully disposable with normal household waste. Symmetric and asymmetric cells with a thin planar face-to-face structure were fabricated on polyethylene terephthalate substrate, using eco-friendly chitosan binder based electrode inks, and printed graphite current collectors. The asymmetric cell configuration, with a PANI/CDC positive electrode and an AC negative electrode, demonstrated significantly improved electrochemical performance, through increased operating voltage, energy density and power density, improved cyclic stability and rate capability, and decreased equivalent series resistance (ESR) and leakage current, compared to previously reported symmetric PANI/CDC SCs. The fabricated asymmetric devices had an average capacitance of 250–270 mF, ESR of 20–23 Ω, and leakage current of 140–150 µA, depending on the PANI/CDC variant used. Energy densities of 4.8 Wh kg−1 and 4.9 Wh kg−1, power densities of 1.6 kW kg−1 and 1.5 kW kg−1, and capacitance retention rates of 93% and 97% after 2000 charge–discharge cycles, were achieved with PANI/CDC (10:1) and (30:1) variants, respectively.
Portable network resolving huge-graph isomorphism problem
Authors: An Xin , Li Ling-Fang , Yang Xue , Luo Ming-Xing 
Published: September 2024

Abstract
The graph isomorphism, as a key task in graph data analysis, is of great significance for the understanding, feature extraction, and pattern recognition of graph data. The best performance of traditional methods is the quasi-polynomial time complexity, which is infeasible for huge graphs. This paper aims to propose a lightweight graph network to resolve the problem of isomorphism in huge graphs. We propose a partitioning algorithm with linear time complexity based on isomorphic necessary condition to handle network graphs that cannot be fully computed by a single computer. We use anti-weight convolution analysis and skip connections to obtain a more stable representation with fewer layers and parameters. We implement simulations on personal computer (PC) with graphs consisting of hundred millions of edges, demonstrating the identification performance (

>

98
%

) and time efficiency.
Measuring exploration: evaluation of modelling to generate alternatives methods in capacity expansion models
Authors: Lau Michael , Patankar Neha , Jenkins Jesse D 
Published: September 2024

Abstract
As decarbonisation agendas mature, macro-energy systems modelling studies have increasingly focused on enhanced decision support methods that move beyond least-cost modelling to improve consideration of additional objectives and tradeoffs. One candidate is modelling to generate alternatives (MGA), which systematically explores new objectives without explicit stakeholder elicitation. This paper provides comparative testing of four existing MGA methodologies and proposes a new Combination vector selection approach. We examine each existing method’s runtime, parallelizability, new solution discovery efficiency, and spatial exploration in lower dimensional (N ⩽ 100) spaces, as well as spatial exploration for all methods in a three-zone, 8760 h capacity expansion model case. To measure convex hull volume expansion, this paper formalizes a computationally tractable high-dimensional volume estimation algorithm. We find random vector provides the broadest exploration of the near-optimal feasible region and variable Min/Max provides the most extreme results, while the two tie on computational speed. The new Combination method provides an advantageous mix of the two. Additional analysis is provided on MGA variable selection, in which we demonstrate MGA problems formulated over generation variables fail to retain cost-optimal dispatch and are thus not reflective of real operations of equivalent hypothetical capacity choices. As such, we recommend future studies utilize a parallelized combined vector approach over the set of capacity variables for best results in computational speed and spatial exploration while retaining optimal dispatch.
Trade can buffer climate-induced risks and volatilities in crop supply
Authors: Haqiqi Iman 
Published: September 2024

Abstract
Climate change is intensifying the frequency and severity of extreme events, posing challenges to food security. Corn, a staple crop for billions, is particularly vulnerable to heat stress, a primary driver of yield variability. While many studies have examined the climate impact on average corn yields, little attention has been given to the climate impact on production volatility. This study investigates the future volatility and risks associated with global corn supply under climate change, evaluating the potential benefits of two key adaptation strategies: irrigation and market integration. A statistical model is employed to estimate corn yield response to heat stress and utilize NEX-GDDP-CMIP6 climate data to project future production volatility and risks of substantial yield losses. Three metrics are introduced to quantify these risks: Sigma (σ), the standard deviation of year-on-year yield change, which reflects overall yield volatility; Rho (ρ), the risk of substantial loss, defined as the probability of yield falling below a critical threshold; and beta (β), a relative risk coefficient that captures the volatility of a region’s corn production compared to the globally integrated market. The analysis reveals a concerning trend of increasing year-on-year yield volatility (σ) across most regions and climate models. This volatility increase is significant for key corn-producing regions like Brazil and the United States. While irrigated corn production exhibits a smaller rise in volatility, suggesting irrigation as a potential buffer against climate change impacts, it is not a sustainable option as it can cause groundwater depletion. On the other hand, global market integration reduces overall volatility and market risks significantly with less sustainability concerns. These findings highlight the importance of a multidimensional approach to adaptation in the food sector. While irrigation can benefit individual farmers, promoting global market integration offers a broader solution for fostering resilience and sustainability across the entire food system.
Animal Matter
Authors: Sugiyama Nawa 
Published: September 2024

Abstract
This chapter introduces the main protagonists and the theoretical framework underpinning the study of nearly two hundred faunal remains retrieved from the offertory caches at the Moon Pyramid of Teotihuacan, Mexico. Animal matter, both corporeal animal forms (animal bodies and by-products) and their representation, are understood within a relational ontology as active persons with social positionality. Corporeal animal forms materially record diachronic and synchronic patterns of interpersonal relationships between humans and animals. Thus, they provide optimal contextually situated reconstructions of how corporeal animal forms participated in ritual performances. State ritualized performances are particularly effective sites of engagement to retrieve the social transactions among humans, animals, and other agentive persons during the process of sovereignty formations at Teotihuacan.
Ritualization of Animal Matter
Authors: Sugiyama Nawa 
Published: September 2024

Abstract
This chapter introduces the main protagonists and the theoretical framework underpinning the study of nearly two hundred faunal remains retrieved from the offertory caches at the Moon Pyramid of Teotihuacan, Mexico. Animal matter, both corporeal animal forms (animal bodies and by-products) and their representation, are understood within a relational ontology as active persons with social positionality. Corporeal animal forms materially record diachronic and synchronic patterns of interpersonal relationships between humans and animals. Thus, they provide optimal contextually situated reconstructions of how corporeal animal forms participated in ritual performances. State ritualized performances are particularly effective sites of engagement to retrieve the social transactions among humans, animals, and other agentive persons during the process of sovereignty formations at Teotihuacan.
The Spectral Lineage
Authors: Kishi Madoka 
Published: September 2024

Abstract
This chapter moves from the previous chapters’ focus on women to the crisis of white manhood that race suicide fomented, tracking its manifestation in Teutonism. Even though Teutonism is often conflated with Anglo-Saxonism, this chapter argues that US Teutonism was constructed as whiteness’s atavistic return to a Viking-age northern European origin, aiming to disidentify from a neurasthenic Anglo-Saxon heritage. Jack London’s works stage this phantasmal revivification of the primordial virile tribe, superimposing the image of Viking-age Scandinavia onto the American Northland as the symbolic homeland of the Teutons. Crucially, in London’s settler-colonist imagination, this transmutation of whiteness is effectuated through the massacre of Indigenous people in Alaska. While the appropriation of the Native practice of totemic kinship opens up a queer space of interspecies intimacy for London, the murderousness of such appropriation haunts his work, culminating in the suicide of the eponymous hero of his autobiographical novel, Martin Eden (1909).
Comprehending Cinema
Authors: MacDonald Scott 
Published: September 2024

Abstract
Comprehending Cinema: Panoramic Audiovisioning, the third book in Scott MacDonald's "Avant-Doc" trilogy (with Avant-Doc: Intersections of Documentary and Avant-Garde Cinema, 2015; and The Sublimity of Document: Cinema as Diorama, 2019) is a collection of 15 in-depth interviews and 3 essays. Central themes include modern uses of the cinematic archive and varieties of filmmaker collaboration. Interviewees include Su Friedrich, Guy Maddin and Evan and Galen Johnson, poet John Ashbery, Tadhg O'Sullivan, Jennifer West, Penny Lane, Dean Fleischer Camp, Daniel Lindsay/TJ Martin, Jennifer Anderson/Vernon Lott, Paul Cronin, Bill Morrison, Lucien Castaing-Taylor/Véréna Paravel, Erin Espelie, and Chloé Galibert-Laîné. Three panoramic essays function as entr'acts within the drama of filmmaker voices. In “Night Light: The Modern Cine-Nocturne,” MacDonald discusses a range of filmmakers who have brought the tradition of musical and painterly nocturne into modern cinema: Kenneth Anger, Peter Hutton, Barry Jenkins, Abbas Kiarostami, Rebecca Meyers, Mary Beth Reed, Phil Solomon, Chick Strand, and Laura Washington. In “Loznitsa X 4” MacDonald surveys the wide-ranging filmmaking of Ukrainian filmmaker Sergei Loznitsa, who has worked in four different cinematic modes: archival filmmaking, cinema-verité documentary, quiet meditation, and political horror film. “Recent Archival Engagements with ‘The War to End All Wars,’” explores responses to the anniversary of World War 1 by Bill Morrison, Yervant Gianikian/Angela Ricci Lucchi, and Peter Jackson. Comprehending Cinema concludes with an interview with the group that Roger Ebert called, “the best in the world at accompanying silent film”: the Alloy Orchestra (Terry Donahue, Roger Miller and Ken Winokur), at the conclusion of their 30-year run.
Two Decades of Collaboration
Authors: MacDonald Scott 
Published: September 2024

Abstract
Prolific indie filmmaker Guy Maddin and his young collaborators, Evan Johnson and Galen Johnson, discuss their burlesque of Hyena Road (2015), and their attempts to bring imagined lost films to life in The Forbidden Room (2015) and in Seances, a National Film Board of Canada website where a cinephile can see a film made specifically for them, created on the spot, and existing for only that one viewing. Recently, the three collaborators also created The Green Fog (2017), a remake of Vertigo, using only clips of other films and TV shows shot in the Bay Area; Accidence (2018), a digitally constructed film that feels like Rear Window gone mad; and dream films evoked by Fellini. Their methods of working as a collaborative team are discussed at some length.
The Normative Space of Musical Performance: Expertise and the Symbolic Body
Authors: Finke Ståle , Solli Mattias 
Published: September 2024

Abstract
This article proposes a communicative, imitative, and reflective account of musical learning and expertise. It starts from an affirmative yet critical reading of Høffding and collaborators, notably their idea of a musical arch, meant to bridge distinctions between low-level procedural enactment and high-level reflective cognition. While we embrace much of their analysis, we argue that they uphold tensions between these levels. Drawing on recent enactivist thought, phenomenological and hermeneutic resources, and developmental psychology, we propose a ‘linguistic turn’ that allows us to situate the enactive body in what has been called an ‘original communication-situation’. The original communication-situation encompasses procedural proto-linguistic behaviour and a reflexive level of linguistic co-intentionality procedurally coupled with other bodies. From this perspective, musical co-creation within the normative space of the musical arch is a dialectical actualization of vertical and horizontal experience, reflecting transformative accomplishments of symbolic bodies within a linguistic field of participatory sense-making. The normative space of musical performance is the result of emergent features of music as embodied social practice.
Epstein-Barr virus–positive, primary cutaneous marginal zone lymphoma, with transformation: Case report and review of the literature
Authors: Soma Lori , Crisan Liliana , Reid Jack , Lee Winston , Song Joo , Afkhami Michelle , Shouse Geoffrey , Fei Fei , Danilova Olga , Pillai Raju , Zain Jasmin , Querfeld Christiane 
Published: September 2024

Abstract

Introduction
Epstein-Barr Virus (EBV) positive primary cutaneous marginal zone lymphoma (PCMZL) is uncommon and subsequent transformation is rare.

Methods
We report a patient with EBV positive PCMZL with subsequent transformation to plasmablastic lymphoma and review the literature for transformed PCMZL to assess clinical and pathologic characteristics. In the case we describe, the patient presented with multifocal PCMZL, developed large B cell transformation with plasmacytic differentiation, followed by plasmablastic transformation (PBL), and ultimately died of disease progression despite multiple lines of therapy. Past history was significant for psoriatic arthritis (multiple prior lines of immunomodulatory therapy). The lymphomas and non-involved bone marrow share the same somatic DNMT3A and TET2 mutations, suggesting clonal relatedness and an association with clonal hematopoiesis (CH).

Results
Eighteen cases comprised the cohort (seventeen cases from the literature and the case reported herein). Nearly half of the eighteen cases of PCMZL with transformation died of progressive disease (44%). Transformed cases were more commonly seen in patients with &gt;2 sites at initial diagnosis. EBV was assessed in 5 patients, 3 were positive (all died of disease). Two patients with NGS studies demonstrated TET2 and DNMT3A mutations.

Conclusions
Transformation of EBV positive PCMZL appears to be a poor prognostic indicator, with our reported case being the first well defined case transformed to PBL, suspected to arise from myeloid-CH.
An evolved interpretation of Austin Bradford Hill’s causal viewpoints and their influence on epidemiologic methods
Authors: Lesko Catherine R , Fox Matthew P 
Published: September 2024

Abstract
In 1965, Sir Austin Bradford Hill articulated nine viewpoints for evaluating whether a body of evidence about the relationship between an exposure and outcome should be interpreted causally. In this commentary, we highlight a selection of the ways in which these viewpoints have had an impact on the field of epidemiology in terms of methods development, study design, and interpretation of results. Additionally, we opine on how the viewpoints relate to our understanding of basic epidemiologic concepts – for example, our choice of absolute or relative measures of effect, our evolving understanding of the role of context in the generalizability of study results, and modern epistemologies for causal inference (i.e., the potential outcomes framework and graphical causal models). Hill cautioned his audience that evidence should be weighed according to the policy choice it would inform and the context in which that policy would be implemented. We root our remarks in considerations of the public health impact of our conclusions about the causal nature of an observed relationship.
PGBind: pocket-guided explicit attention learning for protein–ligand docking
Authors: Shen Ao , Yuan Mingzhi , Ma Yingfan , Du Jie , Wang Manning 
Published: September 2024

Abstract
As more and more protein structures are discovered, blind protein–ligand docking will play an important role in drug discovery because it can predict protein–ligand complex conformation without pocket information on the target proteins. Recently, deep learning-based methods have made significant advancements in blind protein–ligand docking, but their protein features are suboptimal because they do not fully consider the difference between potential pocket regions and non-pocket regions in protein feature extraction. In this work, we propose a pocket-guided strategy for guiding the ligand to dock to potential docking regions on a protein. To this end, we design a plug-and-play module to enhance the protein features, which can be directly incorporated into existing deep learning-based blind docking methods. The proposed module first estimates potential pocket regions on the target protein and then leverages a pocket-guided attention mechanism to enhance the protein features. Experiments are conducted on integrating our method with EquiBind and FABind, and the results show that their blind-docking performances are both significantly improved and new start-of-the-art performance is achieved by integration with FABind.
Novel systems biology experimental pipeline reveals matairesinol’s antimetastatic potential in prostate cancer: an integrated approach of network pharmacology, bioinformatics, and experimental validation
Authors: Rajadnya Rama , Sharma Nidhi , Mahajan Akanksha , Ulhe Amrita , Patil Rajesh , Hegde Mahabaleshwar , Mali Aniket 
Published: September 2024

AbstractMatairesinol (MAT), a plant lignan renowned for its anticancer properties in hormone-sensitive cancers like breast and prostate cancers, presents a promising yet underexplored avenue in the treatment of metastatic prostate cancer (mPC). To elucidate its specific therapeutic targets and mechanisms, our study adopted an integrative approach, amalgamating network pharmacology (NP), bioinformatics, GeneMANIA-based functional association (GMFA), and experimental validation. By mining online databases, we identified 27 common targets of mPC and MAT, constructing a MAT-mPC protein–protein interaction network via STRING and pinpointing 11 hub targets such as EGFR, AKT1, ERBB2, MET, IGF1, CASP3, HSP90AA1, HIF1A, MMP2, HGF, and MMP9 with CytoHuba. Utilizing DAVID, Gene Ontology (GO) analysis highlighted metastasis-related processes such as epithelial–mesenchymal transition, positive regulation of cell migration, and key Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways, including cancer, prostate cancer, PI3K-Akt, and MAPK signaling, while the web resources such as UALCAN and GEPIA2 affirmed the clinical significance of the top 11 hub targets in mPC patient survival analysis and gene expression patterns. Our innovative GMFA enrichment method further enriched network pharmacology findings. Molecular docking analyses demonstrated substantial interactions between MAT and 11 hub targets. Simulation studies confirmed the stable interactions of MAT with selected targets. Experimental validation in PC3 cells, employing quantitative real-time reverse-transcription PCR and various cell-based assays, corroborated MAT’s antimetastatic effects on mPC. Thus, this exhaustive NP analysis, complemented by GMFA, molecular docking, molecular dynamics simulations, and experimental validations, underscores MAT’s multifaceted role in targeting mPC through diverse therapeutic avenues. Nevertheless, comprehensive in vitro validation is imperative to solidify these findings.
Loss of CCDC188 causes male infertility with defects in the sperm head–neck connection in mice
Authors: Qiu Yumiao , Shimada Keisuke , Yamamoto Kaito , Ikawa Masahito 
Published: September 2024

Abstract
Acephalic spermatozoa syndrome represents a rare genetic and reproductive disease, which is defined as semen composed of mostly headless spermatozoa. The connecting piece in the neck region, also known as the head-to-tail coupling apparatus, plays a crucial role in the tight linkage between the sperm head and tail. Dysfunction of this structure can lead to separation of sperm heads and tails, and male infertility. Using the mouse as an experimental model, several proteins have been identified as associated with the head-to-tail coupling apparatus and disruption of these proteins causes acephalic spermatozoa. However, the molecular mechanism underlying this morphologic anomaly and head-to-tail coupling apparatus remains elusive. In this study, we focused on coiled-coil domain containing 188 (Ccdc188), which shows testis-enriched expression. To elucidate the physiological role of CCDC188, we generated a knockout mouse line using the CRISPR/Cas9 system. Ccdc188 knockout male mice were sterile, indicating that CCDC188 is indispensable for male fertility. Most Ccdc188-null spermatozoa were acephalic. Transmission electron microscopy revealed that while the sperm head-to-tail coupling apparatus could assemble properly without CCDC188, the head-to-tail coupling apparatus failed to attach to the nucleus during spermiogenesis, leading to sperm head and neck separation. In addition, we found almost all of the spermatozoa in the cauda epididymis lacked a mitochondrial sheath. Taken together, we demonstrated that CCDC188 plays a crucial role in forming a tight sperm head–neck junction.