bluuebunny/crossref_metadata_2025_split huggingface dataset:
Participatory epidemiology: the contribution of participatory research to epidemiology
Authors: Bach Mario , Jordan Susanne , Hartung Susanne , Santos-Hövener Claudia , Wright Michael T. 
Published: February 2017

Abstract
Background
Epidemiology has contributed in many ways to identifying various risk factors for disease and to promoting population health. However, there is a continuing debate about the ability of epidemiology not only to describe, but also to provide results which can be better translated into public health practice. It has been proposed that participatory research approaches be applied to epidemiology as a way to bridge this gap between description and action. A systematic account of what constitutes participatory epidemiology practice has, however, been lacking.

Methods
A scoping review was carried out focused on the question of what constitutes participatory approaches to epidemiology for the purpose of demonstrating their potential for advancing epidemiologic research. Relevant databases were searched, including both the published and non-published (grey) literature. The 102 identified sources were analyzed in terms of comparing common epidemiologic approaches to participatory counterparts regarding central aspects of the research process. Exemplary studies applying participatory approaches were examined more closely.

Results
A highly diverse, interdisciplinary body of literature was synthesized, resulting in a framework comprised of seven aspects of the research process: research goal, research question, population, context, data synthesis, research management, and dissemination of findings. The framework specifies how participatory approaches not only differ from, but also how they can enhance common approaches in epidemiology. Finally, recommendations for the further development of participatory approaches are given. These include: enhancing data collection, data analysis, and data validation; advancing capacity building for research at the local level; and developing data synthesis.

Conclusion
The proposed framework provides a basis for systematically developing the emergent science of participatory epidemiology.
Discussing Life-sustaining Therapy With Surrogate Decision Makers
Authors: Hwang David Y. 
Published: February 2017

ABSTRACT
Clinicians caring for patients with severe stroke in intensive care units often grapple with requests from surrogate decision makers for life-prolonging treatment that members of the care team may believe to be futile. An example is a surrogate decision maker’s request to place a tracheostomy and feeding tube in a patient who, in the clinical judgment of the neurocritical care team, is very unlikely to recover interactive capacity. This article presents a case, discusses definitions of medical futility, and summarizes recommended steps for mediating conflict regarding potentially inappropriate treatment.
Diagnosis and Management of Transient Ischemic Attack
Authors: Coutts Shelagh B. 
Published: February 2017

ABSTRACT

Purpose of Review: This article reviews the diagnosis, investigation, and recommended management after a transient ischemic attack (TIA) and discusses how to make an accurate diagnosis, including the diagnosis of mimics of TIAs.

Recent Findings: Up to a 10% risk of recurrent stroke exists after a TIA, and up to 80% of this risk is preventable with urgent assessment and treatment. Imaging of the brain and intracranial and extracranial blood vessels using CT, CT angiography, carotid Doppler ultrasound, and MRI is an important part of the diagnostic assessment. Treatment options include anticoagulation for atrial fibrillation, carotid revascularization for symptomatic carotid artery stenosis, antiplatelet therapy, and vascular risk factor reduction strategies.

Summary: TIA offers the greatest opportunity to prevent stroke that physicians encounter. A TIA should be treated as a medical emergency, as up to 80% of strokes after TIA are preventable.
Remote Evaluation of the Patient With Acute Stroke
Authors: Demaerschalk Bart M. 
Published: February 2017

ABSTRACT
This article describes advances related to the successful remote evaluation of the patient with acute stroke. Telestroke is a connected care approach that brings expert stroke care to remote, neurologically underserved urban or rural locations. Recent findings reveal strong evidence showing that telestroke is equivalent to in-person care. Time is critical in treating patients with acute stroke, and telestroke networks must assure that technology improves—not delays—delivery of care. The stroke center and the spoke site must work collaboratively to develop and institute protocols and policies to ensure that eligible patients are identified, assessed, and treated swiftly. Adverse outcomes, such as intracranial hemorrhage and mortality, must be monitored to assess safety metrics. An additional goal of telestroke networks is to screen patients who might be candidates for potential endovascular or neurosurgical therapy and transfer these patients for these procedures.
Monitoring disease activity and severity in lupus
Authors: Khan Abidullah , Haider Iqbal , Ayub Maimoona , Khan Salman 
Published: February 2017

Background: Systemic lupus erythematosus (SLE) is a relatively uncommon disease of young females in Pakistan. Usually, it has a relapsing-remitting course with variable severity and disease activity. Amongst the different clinical and laboratory parameters used to monitor disease activity in lupus, mean platelet volume (MPV) is a novel biomarker. Although MPV has been studied in other rheumatological conditions like rheumatoid arthritis, its role in adult SLE needs to be defined, especially in Pakistan. Methods: The aim of this study was to evaluate the role of MPV as a biomarker of disease activity in SLE. This study included 25 patients with active SLE, and another 25 participants with stable, inactive lupus. MPV was measured in each group and compared using SPSS version 16. MPV was also correlated with SLE disease activity index (SLEDAI) and erythrocyte sedimentation rate (ESR). Independent sample t-test and Pearson’s correlation tests were applied. Sensitivity and specificity of MPV were checked through ROC analysis. Results: The MPV of patients with active SLE (n=25, mean [M]=7.12, SD=1.01) was numerically lower than those in the inactive-SLE group (n=25, M= 10.12, SD=0.97), and this was statistically significant (P<0.001). MPV had an inverse relationship with both ESR (r=-0.93, P<0.001) and SLEDAI (r= -0.94, P<0.001). However, there was a strong positive correlation between ESR and SLEDAI (r=0.95, P<0.001). For MPV, a cutoff value of less than 8.5fl had a sensitivity of 92% and a specificity of 100% (P< 0.001). Conclusions: Higher disease activity in SLE is associated with a correspondingly low MPV.
Variation in rice root traits assessed by phenotyping under drip irrigation
Authors: Parthasarathi T. , Vanitha K. , Mohandass S. , Vered Eli , Meenakshi V. 
Published: February 2017

Background: Roots are the key elements in water saving rice cultivation. So, the response of rice roots are to be phenotyped under varied drip irrigation treatments. Methods: This study describes an investigation on rice root phenotyping under drip irrigation treatments in split-split plot design. Two lateral spacing levels (0.8 and 1.2m), two depths of irrigation (5-10 and 15-20 cm) by solar powered and well operated irrigation were tested using TNRH 180, JKRH 3333 and ADT(R)45 rice genotypes during the summer season (2013 & 2014) in Coimbatore, India. Conventional aerobic irrigation was considered as control. Results and Discussion: An increased root length, root density (length and weight), root Adinosine Tri Phosphotase enzyme activity, root volume and filled grain percentage were favored in aerobic rice under the conditions of 0.8m lateral distance with 5-10cm depth of sub surface drip irrigation (SDI). Improved root characteristics were observed in JKRH 3333 rice hybrid, and root density and thickness favored the filled grains and yield increment in rice by drip irrigation. The 0.8m lateral distance laid out at 5-10cm depth SDI proliferated more roots at subsurface soil layer with significant yield increment in rice.
Revisiting olfactory receptors as putative drivers of cancer
Authors: Ranzani Marco , Iyer Vivek , Ibarra-Soria Ximena , Del Castillo Velasco-Herrera Martin , Garnett Mathew , Logan Darren , Adams David J. 
Published: February 2017

Background: Olfactory receptors (ORs) recognize odorant molecules and activate a signal transduction pathway that ultimately leads to the perception of smell. This process also modulates the apoptotic cycle of olfactory sensory neurons in an olfactory receptor-specific manner. Recent reports indicate that some olfactory receptors are expressed in tissues other than the olfactory epithelium suggesting that they may have pleiotropic roles. Methods: We investigated the expression of 301 olfactory receptor genes in a comprehensive panel of 968 cancer cell lines. Results: Forty-nine per cent of cell lines show expression of at least one olfactory receptor gene. Some receptors display a broad pattern of expression across tumour types, while others were expressed in cell lines from a particular tissue. Additionally, most of the cancer cell lines expressing olfactory receptors express the effectors necessary for OR-mediated signal transduction. Remarkably, among cancer cell lines, OR2C3 is exclusively expressed in melanoma lines. We also confirmed the expression of OR2C3 in human melanomas, but not in normal melanocytes. Conclusions: The pattern of OR2C3 expression is suggestive of a functional role in the development and/or progression of melanoma. Some olfactory receptors may contribute to tumorigenesis.
Humans Are Not Machines: The Behavioral Impact of Queueing Design on Service Time
Authors: Shunko Masha , Niederhoff Julie , Rosokha Yaroslav 
Published: February 2017

Using behavioral experiments, we study the impact of queue design on worker productivity in service systems that involve human servers. Specifically, we consider two queue design features: queue structure, which can be either parallel queues (multiple queues with a dedicated server per queue) or a single queue (a pooled queue served by multiple servers), and queue-length visibility, which can provide either full or blocked visibility. We find that (1) the single-queue structure slows down the servers, illustrating a drawback of pooling, and (2) poor visibility of the queue length slows down the servers; however, this effect may be mitigated, or even reversed, by pay schemes that incentivize the servers for fast performance. We provide additional managerial insights by isolating two behavioral drivers behind these results—task interdependence and saliency of feedback. Data are available at https://doi.org/10.1287/mnsc.2016.2610 . This paper was accepted by Gad Allon, operations management.
Adsorption of Soil-Derived Humic Acid by Seven Clay Minerals: A Systematic Study
Authors: Chotzen Rebecca A. , Polubesova Tamara , Chefetz Benny , Mishael Yael G. 
Published: February 2017

AbstractHumic acid (HA)-clay complexes are well known for their contribution to soil structure and environmental processes. Despite extensive research, the mechanisms governing HA adsorption are yet to be resolved. A systematic study was conducted to characterize the adsorption of a soil-derived HA to seven clay minerals. Clay surfaces affected HA adsorption directly due to structural differences and indirectly by altering solution pH. The following order of HA removal was obtained for the clay minerals at their natural pH: illite ≫ palygorskite > kaolinite > sepiolite > montmorillonite = hectorite ≫ talc. Removal of HA (precipitation and adsorption) by kaolinite and illite was attributed to the low pH they induce, resulting in protonation of the clay and HA surfaces. In spite of the low pH, the zeta potential for HA remained negative, which promoted HA adsorption to the protonated clay surfaces by ligand exchange. Ionic strength did not affect HA adsorption to clay minerals with low zeta potentials, indicating that charge screening is not a major mechanism of HA adsorption for these minerals, and supporting the suggestion that ligand exchange is the main adsorption mechanism to pH-dependent sites. The increase in ionic strength did, however, promote HA adsorption to clay minerals with high zeta potentials. At pH 8–9 the order of HA affinity for clay minerals was: palygorskite >>sepiolite > montmorillonite = hectorite > kaolinite > illite > talc, emphasizing strong HA interactions with the fibrous clays. This strong affinity was attributed to their large surface areas and to strong interactions with OH groups on these clay surfaces. Results indicated that HA did not enter the intracrystalline channels of the fibrous clays but suggested that their macro-fiber structure facilitates HA adsorption. The sorption of HA to kaolinite further increased in the presence of Cu2+, and the sorption of Cu2+ increased in the presence of HA, due to a number of synergistic effects. This study emphasizes the diverse effects of clay structure and solution chemistry on HA adsorption.
Kaolinite and Halloysite Derived from Sequential Transformation of Pedogenic Smectite and Kaolinite-Smectite in a 120 ka Tropical Soil Chronosequence
Authors: Ryan P. C. , Huertas F. J. , Hobbs F. W. C. , Pincus L. N. 
Published: February 2017

AbstractTropical soils range from nutrient-depleted lateritic soils rich in halloysite or kaolinite to Inceptisols rich in interstratified kaolinite-smectite (K-S), smectite, or related 2:1 clays. Given the strong influence of clay minerals on tropical soil quality, better understanding of factors influencing their occurrence is important for modeling and managing tropical environments. This study examines the alteration of smectite to kaolinite by way of intermediate K-S and halloysite in a 120 ka moist tropical chronosequence. Iron-rich smectite (11.6 ± 2.2% Fe2O3) is the dominant mineral in Holocene soils (1–8 ka) originating from sediments rich in plagioclase and clinopyroxene. The cation exchange capacity (CEC) of smectite is 54–84 cmolc/kg and pH is 6.1 to 7.4. Within 50 ka, smectite fixes Al-hydroxy complexes into interlayers, K+ is retained preferentially over Ca2+, and 2:1 layers are stripped of tetrahedral sheets; the resulting K-S inherits flaky smectite crystal habit and the 2:1 layers — which only expand partially — include Al-hydroxy smectite and some illite-like layers. After 50 ka, the dominant mineral is K-S, the CEC is 18–28 cmolc/kg, and the pH is 5.3. Flaky Fe-kaolinite with ~10% residual smectite layers and halloysite (7.4% Fe2O3) also occur in 50 ka soil. The 120 ka soils are dominated by flaky Fe-kaolinite (<10% residual smectite layers) and halloysite (4.9% Fe2O3), and Fe-poor hexagonal kaolinite also occurs (5–10% of soil). The CEC is 11–16 cmolc/kg and the pH is 4.7–5.3.Changes in crystal chemistry of the soil clays (decreasing Fe, Mg, Ca, and K; increasing Al) over time reflects two reaction mechanisms: (1) cell-preserved transformation of smectite layers to kaolinite layers that accompanies conversion of smectite to K-S and eventually kaolinite; this results in the formation of flaky Fe-rich kaolinites after 50 ka; and (2) dissolution of K-S followed by crystallization of halloysite. Neoformation of hexagonal kaolinite and/or halloysite with low Fe (<3% Fe2O3) follows dissolution of Fe-kaolinite or halloysite after 100 ka. This sequence is probably common in moist tropical soils and these findings may inform modeling of soil composition in tropical landscapes where tectonic, volcanic, or geomorphic activity periodically exposes unweathered parent material, producing a range of soil ages.
XRD and TEM Studies on Nanophase Manganese Oxides in Freshwater Ferromanganese Nodules from Green Bay, Lake Michigan
Authors: Lee Seungyeol , Xu Huifang 
Published: February 2017

AbstractFreshwater ferromanganese nodules (FFN) from Green Bay, Lake Michigan have been investigated by X-ray powder diffraction (XRD), micro X-ray fluorescence (XRF), scanning electron microscopy (SEM), high-resolution transmission electron microscopy (HRTEM), and scanning transmission electron microscopy (STEM). The samples can be divided into three types: Mn-rich nodules, Fe-Mn nodules, and Fe-rich nodules. The manganese-bearing phases are todorokite, birnessite, and buserite. The iron-bearing phases are feroxyhyte, goethite, 2-line ferrihydrite, and proto-goethite (intermediate phase between feroxyhyte and goethite). The XRD patterns from nodule cross sections suggest the transformation of birnessite to todorokite. The TEM-EDS spectra show that todorokite is associated with Ba, Co, Ni, and Zn; birnessite is associated with Ca and Na; and buserite is associated with Ca. The todorokite has an average chemical formula of Ba0.28p2+(Zn0.14p+2Co0.05p3+Ni0.02p2+) (Mn4.99p4+Mn0.82p3+Fe0.12p3+Co0.05p3+Ni0.02p2+) O12·nH2O. Barium is the main cation in the structural tunnels of the todorokite. The average chemical formula of birnessite and Ca-buserite are: Na0.14p+Ca0.19p2+(Mn1.48p4+Mn0.52p3+0.52) O4·nH2O and Ca0.27p2+(Mn1.46p4+Mn0.54p3+)O4·nH2O, respectively. Most nodules have a concretionary structure of alternating Fe/Mn layers, commonly with a core of reddish feldspar containing phyllosilicates and hematite micro-crystals. Other cores consist of goethite, cristobalite, tridymite, hercynite, hematite-bearing quartz, coal, and chlorite-bearing rock fragments. The hexagonal or hexagonal-like structures of hematite micro-crystals and clay minerals in the cores may serve as heterogeneous nucleation sites for the Mn-oxides and Fe-(oxyhydr)oxides. The alternating Fe/Mn layers in FFNs might be caused by oscillatory redox condition fluctuations at the sediment-water interface due to changes in water level.
Surface Crystal Chemistry of Phyllosilicates Using X-Ray Photoelectron Spectroscopy: A Review
Authors: Elmi Chiara , Guggenheim Stephen , Gieré Reto 
Published: February 2017

AbstractThe characterization of freshly cleaved mica surfaces for surface structure and chemical composition was briefly reviewed and focused on surface crystal chemistry using X-ray photoelectron spectroscopy (XPS) and other surface-sensitive techniques. This paper considers micas, which are useful as a first approximation for the behavior of many clay surfaces. Emphasis was given to phyllosilicate XPS binding energies (“chemical shift”), which were described and used to obtain oxidation state, layer charge, and chemical bonding information from the chemical shifts of different peaks. The chemical shift of the Si2p binding-energy to lower values can result from a negative charge increase because of Si4+ replacement by Al3+ and/or Fe3+. The apparent interlayer coordination number reduction from twelve to eight at muscovite and tetraferri-phlogopite (001) surfaces was indicated by the XPS measured K2p binding-energy and is consistent with bond relaxation. Although chemical shifts are valuable to distinguish chemical bonding and oxidation state, chemical shifts usually cannot distinguish between different Al coordination environments where Al is in both tetrahedral and octahedral sites.
Clay Minerals in Deeply Buried Paleoregolith Profiles, Norwegian North Sea
Authors: Riber Lars , Dypvik Henning , Sørlie Ronald , Ferrell Ray E. 
Published: February 2017

AbstractRecent discoveries of oil in deeply buried paleoregolith profiles on the Utsira High, Norwegian North Sea, was the first time basement rocks had been demonstrated to be petroleum reservoirs on the Norwegian continental shelf. The present study aimed to establish the processes responsible for the primary weathering sequence, distinguish them from other phases of alteration, and create a model for the development of reservoir properties in crystalline basement rocks.Hand-specimen and laboratory tests revealed a link between reservoir properties in weathered granitic rocks and alteration facies. Samples were obtained from two distinct paleoregolith profiles on the Utsira High. The core samples were studied in detail by optical microscopy, X-ray powder diffraction, scanning electron microscopy, and X-ray fluorescence. In the altered coherent rock facies, porosity and permeability were mainly created by joints and fractures prior to subaerial exposure. In the altered compact rock and altered incoherent rock facies, the development of reservoir properties was increasingly affected by physicochemical interactions between the rock and percolating fluids during subaerial exposure and early diagenesis. In well 16/3-4, the altered coherent rock facies contained R0 illite-smectite (I-S), well ordered kaolinite, and a mixture of fine-grained mica and illite, produced in semi-open and closed microsystems. In the altered compact rock and altered incoherent rock facies, disordered kaolinite became more abundant at the expense of R0 I-S, well ordered kaolinite, plagioclase, and biotite, suggesting alteration in semi-open microsystems. The collapse of the rock structure and clogging of mesofractures by clays contributed to reduced permeability in the clay-rich upper part of the altered incoherent rock. In contrast, well 16/1-15 represented a more deeply truncated weathering profile compared to 16/3-4, characterized by open and interconnected mesofractures and moderate formation of clay. R0 I-S was present and kaolinite was rare throughout the profile, suggesting stagnant conditions. During burial, a porosity-reducing serpentine-chlorite Ib β = 90° polytype formed in the overlying sandstone and the regolith. Application of these results should improve the success of exploration and production efforts related to hydrocarbon reservoirs in the altered crystalline basement.
Diminished satellite cell fusion and S6K1 expression in myotubes derived from skeletal muscle of low birth weight neonatal pigs
Authors: Chen Ying , Zhu Haibo , McCauley Sydney R. , Zhao Lidan , Johnson Sally E. , Rhoads Robert P. , El‐Kadi Samer W. 
Published: February 2017

AbstractLow birth weight (LBWT) is consistently associated with impaired postnatal muscle growth in mammals. Satellite cell (SC)‐mediated myonuclear incorporation precedes protein accumulation in the early stages of postnatal muscle development and growth. The objective of this study was to investigate proliferation and differentiation ofSCs and the regulation of protein synthesis signaling in response to insulin‐like growth factor (IGF)‐I stimulation inSC‐derived myotubes ofLBWTneonatal pigs.SCs isolated fromLongissimus dorsimuscle ofLBWTandNBWTpigs (3‐d‐old, n = 8) were cultured and induced to proliferate and differentiate to myotubes in vitro. On day 3 of differentiation, myotubes were fasted in serum‐free media for 3 h and treated with human recombinant R3‐insulin‐like growth factor‐I (rhIGF‐I) at 0, 25, and 50 ng × mL−1for 30 min. There was no difference in proliferation rates ofSCs fromLBWTandNBWTpigs. However,LBWT SCfusion was 15% lower (P ≤ 0.05) without a difference inMyoDormyogeninmRNAexpression in comparison withNBWTpigs, suggestingSCs are not intrinsically different between the two groups.IGF‐Ι stimulation at physiological concentrations activated downstream effectors ofmTORsimilarly in myotubes fromLBWTandNBWTpigs. However, abundance of ribosomal protein S6 kinase 1(S6K1) was lower in myotubes ofLBWTcompared to theirNBWTsiblings (P ≤ 0.05). These results indicate that the modest reduction inSCfusion and S6K1 expression are not the major contributors to the impaired postnatal muscle growth ofLBWTpigs.