bluuebunny/crossref_metadata_2025_split huggingface dataset:
Intrinsic mechanical behavior of femoral cortical bone in young, osteoporotic and bisphosphonate-treated individuals in low- and high energy fracture conditions
Authors: Zimmermann Elizabeth A. , Schaible Eric , Gludovatz Bernd , Schmidt Felix N. , Riedel Christoph , Krause Matthias , Vettorazzi Eik , Acevedo Claire , Hahn Michael , Püschel Klaus , Tang Simon , Amling Michael , Ritchie Robert O. , Busse Björn 
Published: February 2016

AbstractBisphosphonates are a common treatment to reduce osteoporotic fractures. This treatment induces osseous structural and compositional changes accompanied by positive effects on osteoblasts and osteocytes. Here, we test the hypothesis that restored osseous cell behavior, which resembles characteristics of younger, healthy cortical bone, leads to improved bone quality. Microarchitecture and mechanical properties of young, treatment-naïve osteoporosis and bisphosphonate-treated cases were investigated in femoral cortices. Tissue strength was measured using three-point bending. Collagen fibril-level deformation was assessed in non-traumatic and traumatic fracture states using synchrotron small-angle x-ray scattering (SAXS) at low and high strain rates. The lower modulus, strength and fibril deformation measured at low strain rates reflects susceptibility for osteoporotic low-energy fragility fractures. Independent of age, disease and treatment status, SAXS revealed reduced fibril plasticity at high strain rates, characteristic of traumatic fracture. The significantly reduced mechanical integrity in osteoporosis may originate from porosity and alterations to the intra/extrafibrillar structure, while the fibril deformation under treatment indicates improved nano-scale characteristics. In conclusion, losses in strength and fibril deformation at low strain rates correlate with the occurrence of fragility fractures in osteoporosis, while improvements in structural and mechanical properties following bisphosphonate treatment may foster resistance to fracture during physiological strain rates.
Selective Pyroelectric Detection of Millimetre Waves Using Ultra-Thin Metasurface Absorbers
Authors: Kuznetsov Sergei A. , Paulish Andrey G. , Navarro-Cía Miguel , Arzhannikov Andrey V. 
Published: February 2016

AbstractSensing infrared radiation is done inexpensively with pyroelectric detectors that generate a temporary voltage when they are heated by the incident infrared radiation. Unfortunately the performance of these detectors deteriorates for longer wavelengths, leaving the detection of, for instance, millimetre-wave radiation to expensive approaches. We propose here a simple and effective method to enhance pyroelectric detection of the millimetre-wave radiation by combining a compact commercial infrared pyro-sensor with a metasurface-enabled ultra-thin absorber, which provides spectrally- and polarization-discriminated response and is 136 times thinner than the operating wavelength. It is demonstrated that, due to the small thickness and therefore the thermal capacity of the absorber, the detector keeps the high response speed and sensitivity to millimetre waves as the original infrared pyro-sensor does against the regime of infrared detection. An in-depth electromagnetic analysis of the ultra-thin resonant absorbers along with their complex characterization by a BWO-spectroscopy technique is presented. Built upon this initial study, integrated metasurface absorber pyroelectric sensors are implemented and tested experimentally, showing high sensitivity and very fast response to millimetre-wave radiation. The proposed approach paves the way for creating highly-efficient inexpensive compact sensors for spectro-polarimetric applications in the millimetre-wave and terahertz bands.
Contact gating at GHz frequency in graphene
Authors: Wilmart Q. , Inhofer A. , Boukhicha M. , Yang W. , Rosticher M. , Morfin P. , Garroum N. , Fève G. , Berroir J.-M. , Plaçais B. 
Published: February 2016

AbstractThe paradigm of graphene transistors is based on the gate modulation of the channel carrier density by means of a local channel gate. This standard architecture is subject to the scaling limit of the channel length and further restrictions due to access and contact resistances impeding the device performance. We propose a novel design, overcoming these issues by implementing additional local gates underneath the contact region which allow a full control of the Klein barrier taking place at the contact edge. In particular, our work demonstrates the GHz operation of transistors driven by independent contact gates. We benchmark the standard channel and novel contact gating and report for the later dynamical transconductance levels at the state of the art. Our finding may find applications in electronics and optoelectronics whenever there is need to control independently the Fermi level and the electrostatic potential of electronic sources or to get rid of cumbersome local channel gates.
Five-year changes in soil organic carbon and total nitrogen in coastal wetlands affected by flow-sediment regulation in a Chinese delta
Authors: Wang Junjing , Bai Junhong , Zhao Qingqing , Lu Qiongqiong , Xia Zhijian 
Published: February 2016

AbstractChanges in the sources and sinks of soil organic carbon (SOC) and total nitrogen (TN) in wetland soils as indicators of soil quality and climate change have received attention worldwide. Soil samples were collected in 2007 and 2012 in the coastal wetlands of the Yellow River Delta and the SOC and TN were determined to investigate a five-year change in their content and stock in these wetlands as affected by flow-sediment regulation. Our results revealed that the soils in 2007 exhibited greater electrical conductivities, SOC content and density, and ammonium nitrogen (NH4+-N) levels in the top 10 cm soils (p < 0.05) compared with the soils in 2012. In general, the SOC and TN contents decreased with increasing soil depth. However, the highest ratios of soil organic carbon and total nitrogen (molar C/N ratios) were observed in the 30–40 cm soil layer. A significant SOC loss occurred (p < 0.05) in top 10 cm soils, but only a small change in SOC in the top 50 cm soils. Comparatively, TN levels did not show significant differences in the study period.
BATMAN-TCM: a Bioinformatics Analysis Tool for Molecular mechANism of Traditional Chinese Medicine
Authors: Liu Zhongyang , Guo Feifei , Wang Yong , Li Chun , Zhang Xinlei , Li Honglei , Diao Lihong , Gu Jiangyong , Wang Wei , Li Dong , He Fuchu 
Published: February 2016

AbstractTraditional Chinese Medicine (TCM), with a history of thousands of years of clinical practice, is gaining more and more attention and application worldwide. And TCM-based new drug development, especially for the treatment of complex diseases is promising. However, owing to the TCM’s diverse ingredients and their complex interaction with human body, it is still quite difficult to uncover its molecular mechanism, which greatly hinders the TCM modernization and internationalization. Here we developed the first online Bioinformatics Analysis Tool for Molecular mechANism of TCM (BATMAN-TCM). Its main functions include 1) TCM ingredients’ target prediction; 2) functional analyses of targets including biological pathway, Gene Ontology functional term and disease enrichment analyses; 3) the visualization of ingredient-target-pathway/disease association network and KEGG biological pathway with highlighted targets; 4) comparison analysis of multiple TCMs. Finally, we applied BATMAN-TCM to Qishen Yiqi dripping Pill (QSYQ) and combined with subsequent experimental validation to reveal the functions of renin-angiotensin system responsible for QSYQ’s cardioprotective effects for the first time. BATMAN-TCM will contribute to the understanding of the “multi-component, multi-target and multi-pathway” combinational therapeutic mechanism of TCM and provide valuable clues for subsequent experimental validation, accelerating the elucidation of TCM’s molecular mechanism. BATMAN-TCM is available athttp://bionet.ncpsb.org/batman-tcm.
A perfectly stoichiometric and flat CeO2(111) surface on a bulk-like ceria film
Authors: Barth C. , Laffon C. , Olbrich R. , Ranguis A. , Parent Ph. , Reichling M. 
Published: February 2016

AbstractIn surface science and model catalysis, cerium oxide (ceria) is mostly grown as an ultra-thin film on a metal substrate in the ultra-high vacuum to understand fundamental mechanisms involved in diverse surface chemistry processes. However, such ultra-thin films do not have the contribution of a bulk ceria underneath, which is currently discussed to have a high impact on in particular surface redox processes. Here, we present a fully oxidized ceria thick film (180 nm) with a perfectly stoichiometric CeO2(111) surface exhibiting exceptionally large, atomically flat terraces. The film is well-suited for ceria model studies as well as a perfect substitute for CeO2bulk material.
Multi-functionalized carbon dots as theranostic nanoagent for gene delivery in lung cancer therapy
Authors: Wu Yu-Fen , Wu Hsi-Chin , Kuan Chen-Hsiang , Lin Chun-Jui , Wang Li-Wen , Chang Chien-Wen , Wang Tzu-Wei 
Published: February 2016

AbstractTheranostics, an integrated therapeutic and diagnostic system, can simultaneously monitor the real-time response of therapy. Different imaging modalities can combine with a variety of therapeutic moieties in theranostic nanoagents. In this study, a multi-functionalized, integrated theranostic nanoagent based on folate-conjugated reducible polyethylenimine passivated carbon dots (fc-rPEI-Cdots) is developed and characterized. These nanoagents emit visible blue photoluminescence under 360 nm excitation and can encapsulate multiple siRNAs (EGFR and cyclin B1) followed by releasing them in intracellular reductive environment. In vitro cell culture study demonstrates that fc-rPEI-Cdots is a highly biocompatible material and a good siRNA gene delivery carrier for targeted lung cancer treatment. Moreover, fc-rPEI-Cdots/pooled siRNAs can be selectively accumulated in lung cancer cells through receptor mediated endocytosis, resulting in better gene silencing and anti-cancer effect. Combining bioimaging of carbon dots, stimulus responsive property, gene silencing strategy and active targeting motif, this multi-functionalized, integrated theranostic nanoagent may provide a useful tool and platform to benefit clinicians adjusting therapeutic strategy and administered drug dosage in real time response by monitoring the effect and tracking the development of carcinomatous tissues in diagnostic and therapeutic aspects.
Nanoarchitectured Nb2O5 hollow, Nb2O5@carbon and NbO2@carbon Core-Shell Microspheres for Ultrahigh-Rate Intercalation Pseudocapacitors
Authors: Kong Lingping , Zhang Chuanfang , Wang Jitong , Qiao Wenming , Ling Licheng , Long Donghui 
Published: February 2016

AbstractLi-ion intercalation materials with extremely high rate capability will blur the distinction between batteries and supercapacitors. We construct a series of nanoarchitectured intercalation materials including orthorhombic (o-) Nb2O5 hollow microspheres, o-Nb2O5@carbon core-shell microspheres and tetragonal (t-) NbO2@carbon core-shell microspheres, through a one-pot hydrothermal method with different post-treatments. These nanoarchitectured materials consist of small nanocrystals with highly exposed active surface and all of them demonstrate good Li+ intercalation pseudocapacitive properties. In particular, o-Nb2O5 hollow microspheres can deliver the specific capacitance of 488.3 F g−1 and good rate performance of 126.7 F g−1 at 50 A g−1. The o-Nb2O5@carbon core-shell microspheres show enhanced specific capacitance of 502.2 F g−1 and much improved rate performance (213.4 F g−1 at 50 A g−1). Furthermore, we demonstrate for the first time, t-NbO2 exhibits much higher rate capability than o-Nb2O5. For discharging time as fast as 5.9 s (50 A g−1), it still exhibits a very high specific capacitance of 245.8 F g−1, which is 65.2% retention of the initial capacitance (377.0 F g−1 at 1 A g−1). The unprecedented rate capability is an intrinsic feature of t-NbO2, which may be due to the conductive lithiated compounds.
Involvement of an octose ketoreductase and two acyltransferases in the biosynthesis of paulomycins
Authors: Li Jine , Wang Min , Ding Yong , Tang Yue , Zhang Zhiguo , Chen Yihua 
Published: February 2016

AbstractC-4 hydroxyethyl branched octoses have been observed in polysaccharides of several genera of gram negative bacteria and in various antibiotics produced by gram positive bacteria. The C-4 hydroxyethyl branch was proposed to be converted from C-4 acetyl branch by an uncharacterized ketoreduction step. Paulomycins (PAUs) are glycosylated antibiotics with potent inhibitory activity against gram positive bacteria and are structurally defined by its unique C-4′ hydroxyethyl branched paulomycose moiety. A novel aldo-keto-reductase, Pau7 was characterized as the enzyme catalyzing the stereospecific ketoreduction of 7′-keto of PAU E (1) to give the C-4′ hydroxyethyl branched paulomycose moiety of PAU F (2). An acyltransferase Pau6 further decorates the C-4′ hydroxyethyl branch of paulomycose moiety of 2 by attaching various fatty acyl chains to 7′-OH to generate diverse PAUs. In addition, another acyltransferase Pau24 was proposed to be responsible for the 13-O-acetylation of PAUs.
The impact of orientation filtering on face-selective neurons in monkey inferior temporal cortex
Authors: Taubert Jessica , Goffaux Valerie , Van Belle Goedele , Vanduffel Wim , Vogels Rufin 
Published: February 2016

AbstractFaces convey complex social signals to primates. These signals are tolerant of some image transformations (e.g. changes in size) but not others (e.g. picture-plane rotation). By filtering face stimuli for orientation content, studies of human behavior and brain responses have shown that face processing is tuned to selective orientation ranges. In the present study, for the first time, we recorded the responses of face-selective neurons in monkey inferior temporal (IT) cortex to intact and scrambled faces that were filtered to selectively preserve horizontal or vertical information. Guided by functional maps, we recorded neurons in the lateral middle patch (ML), the lateral anterior patch (AL) and an additional region located outside of the functionally defined face-patches (CONTROL). We found that neurons in ML preferred horizontal-passed faces over their vertical-passed counterparts. Neurons in AL, however, had a preference for vertical-passed faces, while neurons in CONTROL had no systematic preference. Importantly, orientation filtering did not modulate the firing rate of neurons to phase-scrambled face stimuli in any recording region. Together these results suggest that face-selective neurons found in the face-selective patches are differentially tuned to orientation content, with horizontal tuning in area ML and vertical tuning in area AL.
Heme oxygenase-1 attenuates IL-1β induced alteration of anabolic and catabolic activities in intervertebral disc degeneration
Authors: Hu Bo , Shi Changgui , Xu Chen , Cao Peng , Tian Ye , Zhang Ying , Deng Lianfu , Chen Huajiang , Yuan Wen 
Published: February 2016

AbstractIntervertebral disc degeneration (IDD) is characterized by disordered extracellular matrix (ECM) metabolism, implicating subdued anabolism and enhanced catabolic activities in the nucleus pulposus (NP) of discs. Pro-inflammatory cytokines such as interleukin-1β (IL-1β) are considered to be potent mediators of ECM breakdown. Hemeoxygenase-1 (HO-1) has been reported to participate in cellular anti-inflammatory processes. The purpose of this study was to investigate HO-1 modulation of ECM metabolism in human NP cells under IL-1β stimulation. Our results revealed that expression of HO-1 decreased considerably during IDD progression. Induction of HO-1 by cobalt protoporphyrin IX attenuated the inhibition of sulfate glycosaminoglycan and collagen type II (COL-II) synthesis and ameliorated the reduced expressions of aggrecan, COL-II, SOX-6 and SOX-9 mediated by IL-1β. Induction of HO-1 also reversed the effect of IL-1β on expression of the catabolic markers matrix metalloproteinases-1, 3, 9 and 13. This was combined with inhibition of the activation of mitogen-activated protein kinase signaling. These findings suggest that HO-1 might play a pivotal role in IDD and that manipulating HO-1 expression might mitigate the impairment of ECM metabolism in NP, thus potentially offering a novel therapeutic approach to the treatment of IDD.
“Optical communication with brain cells by means of an implanted duplex micro-device with optogenetics and Ca2+ fluoroimaging”
Authors: Kobayashi Takuma , Haruta Makito , Sasagawa Kiyotaka , Matsumata Miho , Eizumi Kawori , Kitsumoto Chikara , Motoyama Mayumi , Maezawa Yasuyo , Ohta Yasumi , Noda Toshihiko , Tokuda Takashi , Ishikawa Yasuyuki , Ohta Jun 
Published: February 2016

AbstractTo better understand the brain function based on neural activity, a minimally invasive analysis technology in a freely moving animal is necessary. Such technology would provide new knowledge in neuroscience and contribute to regenerative medical techniques and prosthetics care. An application that combines optogenetics for voluntarily stimulating nerves, imaging to visualize neural activity and a wearable micro-instrument for implantation into the brain could meet the abovementioned demand. To this end, a micro-device that can be applied to the brain less invasively and a system for controlling the device has been newly developed in this study. Since the novel implantable device has dual LEDs and a CMOS image sensor, photostimulation and fluorescence imaging can be performed simultaneously. The device enables bidirectional communication with the brain by means of light. In the present study, the device was evaluated in anin vitroexperiment using a new on-chip 3D neuroculture with an extracellular matrix gel and anin vivoexperiment involving regenerative medical transplantation and gene delivery to the brain by using both photosensitive channel and fluorescent Ca2+indicator. The device succeeded in activating cells locally by selective photostimulation and the physiological Ca2+dynamics of neural cells were visualized simultaneously by fluorescence imaging.
Pancreatic β-Cell Membrane Fluidity and Toxicity Induced by Human Islet Amyloid Polypeptide Species
Authors: Pilkington Emily H. , Gurzov Esteban N. , Kakinen Aleksandr , Litwak Sara A. , Stanley William J. , Davis Thomas P. , Ke Pu Chun 
Published: February 2016

AbstractAggregation of human islet amyloid polypeptide (hIAPP) into fibrils and plaques is associated with pancreatic β-cell loss in type 2 diabetes (T2D). However, due to the rapidness of hIAPP conversion in aqueous phase, exactly which hIAPP species is responsible for the observed toxicity and through what mechanisms remains ambiguous. In light of the importance of understanding hIAPP toxicity for T2D here we show a biophysical scheme based on the use of a lipophilic Laurdan dye for examining MIN6 cell membranes upon exposure to fresh and oligomeric hIAPP as well as mature amyloid. It has been found that all three hIAPP species, especially fresh hIAPP, enhanced membrane fluidity and caused losses in cell viability. The cell generation of reactive oxygen species (ROS), however, was the most pronounced with mature amyloid hIAPP. The correlation between changes in membrane fluidity and cell viability and their lack of correlation with ROS production suggest hIAPP toxicity is elicited through both physical and biochemical means. This study offers a new insight into β-cell toxicity induced by controlled hIAPP species, as well as new biophysical methodologies that may prove beneficial for the studies of T2D as well as neurological disorders.
Morpholino-mediated SOD1 reduction ameliorates an amyotrophic lateral sclerosis disease phenotype
Authors: Nizzardo M. , Simone C. , Rizzo F. , Ulzi G. , Ramirez A. , Rizzuti M. , Bordoni A. , Bucchia M. , Gatti S. , Bresolin N. , Comi G. P. , Corti S. 
Published: February 2016

AbstractNeurotoxicity due to the accumulation of mutant proteins is thought to drive pathogenesis in neurodegenerative diseases. Mutations in superoxide dismutase 1 (SOD1) are linked to familial amyotrophic lateral sclerosis (fALS); these mutations result in progressive motor neuron death through one or more acquired toxicities. Interestingly, SOD1 is not only responsible for fALS but may also play a significant role in sporadic ALS; therefore, SOD1 represents a promising therapeutic target. Here, we report slowed disease progression, improved neuromuscular function, and increased survival in anin vivoALS model following therapeutic delivery of morpholino oligonucleotides (MOs) designed to reduce the synthesis of human SOD1. Neuropathological analysis demonstrated increased motor neuron and axon numbers and a remarkable reduction in astrogliosis and microgliosis. To test this strategy in a human model, we treated human fALS induced pluripotent stem cell (iPSC)-derived motor neurons with MOs; these cells exhibited increased survival and reduced expression of apoptotic markers. Our data demonstrated the efficacy of MO-mediated therapy in mouse and human ALS models, setting the stage for human clinical trials.
Determination of critical diameters for intrinsic carrier diffusion-length of GaN nanorods with cryo-scanning near-field optical microscopy
Authors: Chen Y. T. , Karlsson K. F. , Birch J. , Holtz P. O. 
Published: February 2016

AbstractDirect measurements of carrier diffusion in GaN nanorods with a designed InGaN/GaN layer-in-a-wire structure by scanning near-field optical microscopy (SNOM) were performed at liquid-helium temperatures of 10 K. Without an applied voltage, intrinsic diffusion lengths of photo-excited carriers were measured as the diameters of the nanorods differ from 50 to 800 nm. The critical diameter of nanorods for carrier diffusion is concluded as 170 nm with a statistical approach. Photoluminescence spectra were acquired for different positions of the SNOM tip on the nanorod, corresponding to the origins of the well-defined luminescence peaks, each being related to recombination-centers. The phenomenon originated from surface oxide by direct comparison of two nanorods with similar diameters in a single map has been observed and investigated.
Genetic dissection of plant architecture and yield-related traits in Brassica napus
Authors: Cai Guangqin , Yang Qingyong , Chen Hao , Yang Qian , Zhang Chunyu , Fan Chuchuan , Zhou Yongming 
Published: February 2016

AbstractAn optimized plant architecture (PA) is fundamental for high-yield breeding but the genetic control of the important trait is largely unknown in rapeseed. Here plant architecture factors (PAFs) were proposed to consist of main inflorescence length proportion (MILP), branch height proportion (BHP) and branch segment proportion (BSP). Comparison of different genotypes in a DH population grown in diverse environments showed that an optimized PAF performance with MILP and BHP between 0.3–0.4 was important for high yield potential. In total, 163 unique quantitative trait loci (QTLs) for PA- and plant yield (PY)-related traits were mapped onto a high-density genetic map. Furthermore, 190 PA-related candidate genes for 91 unique PA QTLs and 2350 PY epistatic interaction loci-pairs were identified, which explain 2.8–51.8% and 5.2–23.6% of phenotypic variation, respectively. Three gene categories, transcription factor, auxin/IAA and gibberellin, comprise the largest proportions of candidate genes for PA-related QTLs. The effectiveness of QTL candidate genes prediction was demonstrated by cloning of three candidate genes, Bna.A02.CLV2, Bna.A09.SLY2 and Bna.C07.AHK4. The study thus outlines a gene network for control of PA-related traits and provides novel information for understanding the establishment of ideal PA and for developing effective breeding strategies for yield improvement in rapeseed and other crops.