bluuebunny/crossref_metadata_2025_split huggingface dataset:
Influence of patch shape on mallard nest survival in northern Iowa
Authors: Koford Rolf R. , Dodici Gian , Zenner Guy , Vogel Jennifer A. , Ness Brenna , Klaver Robert W. 
Published: December 2016

ABSTRACTReproductive success of mallards (Anas platyrhynchos) is influenced by distribution and amount of wetlands and grasslands on the landscape during the breeding season. Most studies of mallard reproductive success have been conducted in areas with high wetland densities and large tracts of grasslands. We investigated nest survival of mallards in intensively cropped northern Iowa, USA, where wetland and grassland habitats were highly fragmented. We radiotracked female mallards nesting during 1998–2000 and located 318 nests in 6 types of land cover. Overall daily survival rate of nests was 0.945 ± 0.003 standard error (SE), corresponding to an estimated nest survival rate of 0.14. Hen success (i.e., the probability that an individual female will hatch a nest in one of her attempts) averaged 0.28 ± 0.03 SE. We used a model selection approach to examine covariates that might affect nest survival. Perimeter‐to‐area ratio (PAR) of the nest patch was the most important predictor of daily nest survival, with nest survival decreasing with increasing PAR. A greater percentage of nests hatched (18%) in habitats with low perimeter‐to‐area ratios (e.g., pastures, hayfields, Conservation Reserve Program fields, and managed grasslands) compared with habitats with high PAR (11%) such as drainage ditches, road‐side ditches, fencerows, and waterways. Managing habitat in this region to increase mallard nest survival will be challenging, given the propensity of mallards to nest in linear habitats. If the climate change projections materialize in the 21st century, the southeastern portion of the Prairie Pothole Region could become a much more important breeding area for midcontinent mallards. Published 2016. This article is a U.S. Government work and is in the public domain in the USA.
Functional Properties of Protein Isolates Produced by Aqueous Extraction of De‐hulled Yellow Mustard
Authors: Tabtabaei Solmaz , Hijar Benjamin , Chen Bih King , Diosady Levente L. 
Published: December 2016

AbstractTwo types of protein isolates were prepared from de‐hulled yellow mustard flour by aqueous extraction, membrane processing and isoelectric precipitation. The precipitated and soluble protein isolates had 96.0 and 83.5% protein content on a moisture and oil free basis, respectively. Their functional properties were evaluated and compared with commercial soybean and other Brassica protein isolates. The soluble protein isolate exhibited high values for all properties. The precipitated protein isolate showed excellent oil absorption and emulsifying properties but poor solubility, water absorption and foaming properties due to its high lipid content (~25%). Storage temperature had limited effect on lipid oxidation, and hence the stability of the precipitated protein isolate at 25–45 °C. Flavor of wieners and bologna prepared with 2% of this isolate as binder was comparable to those prepared with soy protein isolate.
Fractionation of Condensed Distillers Solubles and Compositional Characterization of Its Co‐Products
Authors: Liu Keshun 
Published: December 2016

AbstractCondensed distillers solubles (CDS) was fractionated into a protein‐mineral fraction and a glycerol fraction by a chemical method; protein and glycerol‐mineral fractions by a physical method; and protein, mineral, and glycerol fractions by a physicochemical method. The co‐products from each method, along with CDS, were characterized for concentrations of key constituents (protein, oil, ash, glycerol and other carbohydrates), mineral profile, and amino acid composition. Recovery of mass and main constituents was also investigated. With the chemical method, about two‐third of the mass went to the protein‐mineral fraction, while by the physical method the equal amounts of mass went to the protein and glycerol‐mineral fractions. Protein, minerals, and glycerol were mostly recovered into their respective fractions. CDS and its fractions contained six major minerals (Ca, Mg, P, K, Na, and S) and four trace ones (Cu, Fe, Mn, and Zn). Both chemical and physical treatments caused significant reduction of mineral contents (dry matter basis) in the protein or glycerol fraction. Several amino acids differed significantly in percent relative to total amino acids among fractions but the extent was not substantial for protein‐rich fractions. These changes resulting from CDS fractionation are favorable for value added utilization of the new co‐products.
Motivation towards extracurricular activities and motivation at school: A test of the generalization effect hypothesis
Authors: Denault Anne‐Sophie , Guay Frédéric 
Published: December 2016

ABSTRACTParticipation in extracurricular activities is a promising avenue for enhancing students' school motivation. Using self‐determination theory (Deci & Ryan, 2000), the goal of this study was to test a serial multiple mediator model. In this model, students' perceptions of autonomy support from their extracurricular activity leader predicted their activity‐based intrinsic and identified regulations. In turn, these regulations predicted their school‐based intrinsic and identified regulations during the same school year. Finally, these regulations predicted their school‐based intrinsic and identified regulations one year later. A total of 276 youths (54% girls) from disadvantaged neighborhoods were surveyed over two waves of data collection. The proposed mediation model was supported for both types of regulation. These results highlight the generalization effects of motivation from the extracurricular activity context to the school context.
Refractory gastric variceal bleeding secondary to splenic vein occlusion associated with abdominal lymphadenopathy
Authors: Lin Yu‐Chun , Chen Yen‐Bo , Liao Po‐Hao , Chao Wen‐Chi , Lin Jiunn‐Chang , Hong Yu‐Chung , Wang Shen‐Yung 
Published: December 2016

SummarySplenic vein occlusion caused by abdominal lymphadenopathy is rare. We herein present the case of a 80‐year‐old man with refractory isolated gastric variceal bleeding in the absence of pancreatic or liver disease. Left‐sided portal hypertension was confirmed by angiography, and para‐aortic lymphadenopathy compressing the splenic vein was identified by serial abdominal computed tomography. Endoscopic sclerosing therapy failed to treat the recurring gastric variceal hemorrhage. Therefore, splenectomy was suggested and the patient was successfully treated. The patient had been variceal bleeding free for 12 months since the surgery. In patients with isolated gastric varices but without advanced liver disease, a variety of diagnostic techniques should be attempted to elucidate the nature of portal hypertension, and left‐sided portal hypertension should be suspected. For those cases in which endoscopic treatment failed to treat refractory gastric variceal bleeding, splenectomy can be an effective option.
Valproic acid during pregnancy: Case report of a child with congenital malformations due to fetal valproate syndrome, and a high unbound serum level of valproic acid at birth
Authors: Sparla Shirley , Hogeman Paul , van Gemert Maarten , Swart Eleonora , Malingre Mirte 
Published: December 2016

AbstractWe present a child in utero exposed to valproic acid with congenital malformations due to fetal valproate syndrome and with toxic effects. Directly postnatal, a high-unbound serum level of valproic acid was measured. The total serum level of valproic acid was in the therapeutic range. Measuring unbound serum levels during pregnancy and postnatal period in the child provides more information about real-time exposure than measuring total serum levels.
Evidence for a role of viruses in the thermal sensitivity of coral photosymbionts
Authors: Levin Rachel Ashley , Voolstra Christian Robert , Weynberg Karen Dawn , van Oppen Madeleine Josephine Henriette 
Published: December 2016

Abstract
Symbiodinium, the dinoflagellate photosymbiont of corals, is posited to become more susceptible to viral infections when heat-stressed. To investigate this hypothesis, we mined transcriptome data of a thermosensitive and a thermotolerant type C1 Symbiodinium population at ambient (27 °C) and elevated (32°C) temperatures. We uncovered hundreds of transcripts from nucleocytoplasmic large double-stranded DNA viruses (NCLDVs) and the genome of a novel positive-sense single-stranded RNA virus (+ssRNAV). In the transcriptome of the thermosensitive population only, +ssRNAV transcripts had remarkable expression levels in the top 0.03% of all transcripts at 27 °C, but at 32 °C, expression levels of +ssRNAV transcripts decreased, while expression levels of anti-viral transcripts increased. In both transcriptomes, expression of NCLDV transcripts increased at 32 °C, but thermal induction of NCLDV transcripts involved in DNA manipulation was restricted to the thermosensitive population. Our findings reveal that viruses infecting Symbiodinium are affected by heat stress and may contribute to Symbiodinium thermal sensitivity.
Rapid mapping of polarization switching through complete information acquisition
Authors: Somnath Suhas , Belianinov Alex , Kalinin Sergei V. , Jesse Stephen 
Published: December 2016

AbstractPolarization switching in ferroelectric and multiferroic materials underpins a broad range of current and emergent applications, ranging from random access memories to field-effect transistors, and tunnelling devices. Switching in these materials is exquisitely sensitive to local defects and microstructure on the nanometre scale, necessitating spatially resolved high-resolution studies of these phenomena. Classical piezoresponse force microscopy and spectroscopy, although providing necessary spatial resolution, are fundamentally limited in data acquisition rates and energy resolution. This limitation stems from their two-tiered measurement protocol that combines slow (∼1 s) switching and fast (∼10 kHz–1 MHz) detection waveforms. Here we develop an approach for rapid probing of ferroelectric switching using direct strain detection of material response to probe bias. This approach, facilitated by high-sensitivity electronics and adaptive filtering, enables spectroscopic imaging at a rate 3,504 times faster the current state of the art, achieving high-veracity imaging of polarization dynamics in complex microstructures.
The genetic basis and fitness consequences of sperm midpiece size in deer mice
Authors: Fisher Heidi S. , Jacobs-Palmer Emily , Lassance Jean-Marc , Hoekstra Hopi E. 
Published: December 2016

AbstractAn extensive array of reproductive traits varies among species, yet the genetic mechanisms that enable divergence, often over short evolutionary timescales, remain elusive. Here we examine two sister-species of Peromyscus mice with divergent mating systems. We find that the promiscuous species produces sperm with longer midpiece than the monogamous species, and midpiece size correlates positively with competitive ability and swimming performance. Using forward genetics, we identify a gene associated with midpiece length: Prkar1a, which encodes the R1α regulatory subunit of PKA. R1α localizes to midpiece in Peromyscus and is differentially expressed in mature sperm of the two species yet is similarly abundant in the testis. We also show that genetic variation at this locus accurately predicts male reproductive success. Our findings suggest that rapid evolution of reproductive traits can occur through cell type-specific changes to ubiquitously expressed genes and have an important effect on fitness.
Hydroxyl radical-induced formation of highly oxidized organic compounds
Authors: Berndt Torsten , Richters Stefanie , Jokinen Tuija , Hyttinen Noora , Kurtén Theo , Otkjær Rasmus V. , Kjaergaard Henrik G. , Stratmann Frank , Herrmann Hartmut , Sipilä Mikko , Kulmala Markku , Ehn Mikael 
Published: December 2016

AbstractExplaining the formation of secondary organic aerosol is an intriguing question in atmospheric sciences because of its importance for Earth’s radiation budget and the associated effects on health and ecosystems. A breakthrough was recently achieved in the understanding of secondary organic aerosol formation from ozone reactions of biogenic emissions by the rapid formation of highly oxidized multifunctional organic compounds via autoxidation. However, the important daytime hydroxyl radical reactions have been considered to be less important in this process. Here we report measurements on the reaction of hydroxyl radicals with α- and β-pinene applying improved mass spectrometric methods. Our laboratory results prove that the formation of highly oxidized products from hydroxyl radical reactions proceeds with considerably higher yields than previously reported. Field measurements support these findings. Our results allow for a better description of the diurnal behaviour of the highly oxidized product formation and subsequent secondary organic aerosol formation in the atmosphere.
Dynamic nuclear magnetic resonance field sensing with part-per-trillion resolution
Authors: Gross Simon , Barmet Christoph , Dietrich Benjamin E. , Brunner David O. , Schmid Thomas , Pruessmann Klaas P. 
Published: December 2016

AbstractHigh-field magnets of up to tens of teslas in strength advance applications in physics, chemistry and the life sciences. However, progress in generating such high fields has not been matched by corresponding advances in magnetic field measurement. Based mostly on nuclear magnetic resonance, dynamic high-field magnetometry is currently limited to resolutions in the nanotesla range. Here we report a concerted approach involving tailored materials, magnetostatics and detection electronics to enhance the resolution of nuclear magnetic resonance sensing by three orders of magnitude. The relative sensitivity thus achieved amounts to 1 part per trillion (10−12). To exemplify this capability we demonstrate the direct detection and relaxometry of nuclear polarization and real-time recording of dynamic susceptibility effects related to human heart function. Enhanced high-field magnetometry will generally permit a fresh look at magnetic phenomena that scale with field strength. It also promises to facilitate the development and operation of high-field magnets.
Holographic free-electron light source
Authors: Li Guanhai , Clarke Brendan P. , So Jin-Kyu , MacDonald Kevin F. , Zheludev Nikolay I. 
Published: December 2016

AbstractRecent advances in the physics and technology of light generation via free-electron proximity and impact interactions with nanostructures (gratings, photonic crystals, nano-undulators, metamaterials and antenna arrays) have enabled the development of nanoscale-resolution techniques for such applications as mapping plasmons, studying nanoparticle structural transformations and characterizing luminescent materials (including time-resolved measurements). Here, we introduce a universal approach allowing generation of light with prescribed wavelength, direction, divergence and topological charge via point-excitation of holographic plasmonic metasurfaces. It is illustrated using medium-energy free-electron injection to generate highly-directional visible to near-infrared light beams, at selected wavelengths in prescribed azimuthal and polar directions, with brightness two orders of magnitude higher than that from an unstructured surface, and vortex beams with topological charge up to ten. Such emitters, with micron-scale dimensions and the freedom to fully control radiation parameters, offer novel applications in nano-spectroscopy, nano-chemistry and sensing.
A randomised open-label cross-over study of inhaler errors, preference and time to achieve correct inhaler use in patients with COPD or asthma: comparison of ELLIPTA with other inhaler devices
Authors: van der Palen Job , Thomas Mike , Chrystyn Henry , Sharma Raj K , van der Valk Paul DLPM , Goosens Martijn , Wilkinson Tom , Stonham Carol , Chauhan Anoop J , Imber Varsha , Zhu Chang-Qing , Svedsater Henrik , Barnes Neil C 
Published: December 2016

AbstractErrors in the use of different inhalers were investigated in patients naive to the devices under investigation in a multicentre, single-visit, randomised, open-label, cross-over study. Patients with chronic obstructive pulmonary disease (COPD) or asthma were assigned to ELLIPTA vs DISKUS (Accuhaler), metered-dose inhaler (MDI) or Turbuhaler. Patients with COPD were also assigned to ELLIPTA vs Handihaler or Breezhaler. Patients demonstrated inhaler use after reading the patient information leaflet (PIL). A trained investigator assessed critical errors (i.e., those likely to result in the inhalation of significantly reduced, minimal or no medication). If the patient made errors, the investigator demonstrated the correct use of the inhaler, and the patient demonstrated inhaler use again. Fewer COPD patients made critical errors with ELLIPTA after reading the PIL vs: DISKUS, 9/171 (5%) vs 75/171 (44%); MDI, 10/80 (13%) vs 48/80 (60%); Turbuhaler, 8/100 (8%) vs 44/100 (44%); Handihaler, 17/118 (14%) vs 57/118 (48%); Breezhaler, 13/98 (13%) vs 45/98 (46%; all P<0.001). Most patients (57–70%) made no errors using ELLIPTA and did not require investigator instruction. Instruction was required for DISKUS (65%), MDI (85%), Turbuhaler (71%), Handihaler (62%) and Breezhaler (56%). Fewer asthma patients made critical errors with ELLIPTA after reading the PIL vs: DISKUS (3/70 (4%) vs 9/70 (13%), P=0.221); MDI (2/32 (6%) vs 8/32 (25%), P=0.074) and significantly fewer vs Turbuhaler (3/60 (5%) vs 20/60 (33%), P<0.001). More asthma and COPD patients preferred ELLIPTA over the other devices (all P⩽0.002). Significantly, fewer COPD patients using ELLIPTA made critical errors after reading the PIL vs other inhalers. More asthma and COPD patients preferred ELLIPTA over comparator inhalers.
A novel cancer vaccine with the ability to simultaneously produce anti-PD-1 antibody and GM-CSF in cancer cells and enhance Th1-biased antitumor immunity
Authors: Tian Hongwei , Shi Gang , Wang Qin , Li Yiming , Yang Qianmei , Li Chunlei , Yang Guoyou , Wu Min , Xie Qian , Zhang Shuang , Yang Yang , Xiang Rong , Yu Dechao , Wei Yuquan , Deng Hongxin 
Published: December 2016

AbstractTumor escape from immune-mediated destruction has been associated with immunosuppressive mechanisms that inhibit T-cell activation. A promising strategy for cancer immunotherapy is to disrupt key pathways regulating immune tolerance, such as program death-1 (PD-1/PD-L1) pathway in the tumor environment. However, the determinants of response to anti-PD-1 monoclonal antibodies (mAbs) treatment remain incompletely understood. In murine models, PD-1 blockade alone fails to induce effective immune responses to poorly immunogenic tumors, but is successful when combined with additional interventions, such as cancer vaccines. Novel cancer vaccines combined with antibody may offer promising control of cancer development and progression. In this investigation, we generated a novel tumor cell vaccine simultaneously expressing anti-PD-1 mAbs and granulocyte-macrophage colony stimulating factor (GM-CSF) in CT26 colon cancer and B16-F10 melanoma. The antitumor effect of the vaccine was verified by therapeutic and adoptive animal experiments in vivo. The antitumor mechanism was analyzed using Flow cytometry, Elispot and in vivo intervention approaches. The results showed that tumor cell vaccine secreting PD-1 neutralizing antibodies and GM-CSF induced remarkable antitumor immune effects and prolonged the survival of tumor-bearing animals compared with animals treated with either PD-1 mAbs or GM-CSF alone. Antitumor effects and prolonged survival correlated with strong antigen-specific T-cell responses by analyzing CD11c+CD86+ DC, CD11b+F4/80+ MΦ cells, increased ratio of Teff/Treg in the tumor microenvironment, and higher secretion levels of Th1 proinflammatory cytokines in serum. Furthermore, the results of ELISPOT and in vivo blocking strategies further confirmed that the antitumor immune response is acquired by CD4 and CD8 T immune responses, primarily dependent on CD4 Th1 immune response, not NK innate immune response. The combination of PD-1 blockade with GM-CSF secretion potency creates a novel tumor cell vaccine immunotherapy, affording significantly improved antitumor responses by releasing the state of immunosuppressive microenvironment and augmenting the tumor-reactive T-cell responses.
Compressive Sensing with Optical Chaos
Authors: Rontani D. , Choi D. , Chang C.-Y. , Locquet A. , Citrin D. S. 
Published: December 2016

AbstractCompressive sensing (CS) is a technique to sample a sparse signal below the Nyquist-Shannon limit, yet still enabling its reconstruction. As such, CS permits an extremely parsimonious way to store and transmit large and important classes of signals and images that would be far more data intensive should they be sampled following the prescription of the Nyquist-Shannon theorem. CS has found applications as diverse as seismology and biomedical imaging. In this work, we use actual optical signals generated from temporal intensity chaos from external-cavity semiconductor lasers (ECSL) to construct the sensing matrix that is employed to compress a sparse signal. The chaotic time series produced having their relevant dynamics on the 100 ps timescale, our results open the way to ultrahigh-speed compression of sparse signals.
SAG/RBX2 E3 ligase complexes with UBCH10 and UBE2S E2s to ubiquitylate β-TrCP1 via K11-linkage for degradation
Authors: Kuang Peng , Tan Mingjia , Zhou Weihua , Zhang Qiang , Sun Yi 
Published: December 2016

AbstractSAG/RBX2 and RBX1 are two family members of RING components of Cullin-RING ligases (CRLs), required for their enzymatic activity. Previous studies showed that SAG prefers to bind with CUL5, as well as CUL1, whereas RBX1 binds exclusively to CULs1–4. Detailed biochemical difference between SAG and RBX1, and whether SAG mediates cross-talk between CRL5 and CRL1 are previously unknown. Here we report that the levels of SAG and β-TrCP1 are inversely correlated, and SAG-CUL5-βTrCP1 forms a complex under physiological condition. SAG-CUL5, but not RBX1-CUL1, negatively modulates β-TrCP1 levels by shortening its protein half-life through promoting its ubiquitylation via atypical K11-linkage. Consistently, chemical inducers of SAG reduced β-TrCP1 level. Furthermore, SAG mainly binds to E2s UBCH10 and UBE2S known to mediate K11 linkage of ubiquitin, whereas RBX1 exclusively binds to E2s CDC34 and UBCH5C, known to mediate K48 linkage of ubiquitin. Finally, silencing of either UBCH10 or UBE2S, but not UBCH5C, caused accumulation of endogenous β-TrCP1, suggesting that β-TrCP1 is a physiological substrate of SAG-UBCH10C/UBE2S. Our study, for the first time, differentiates SAG and RBX1 biochemically via their respective binding to different E2s; and shows a negative cross-talk between CRL5 and CRL1 through SAG mediated ubiquitylation of β-TrCP1.