bluuebunny/crossref_metadata_2025_split huggingface dataset:
Structure sensitive photocatalytic reduction of nitroarenes over TiO
2
Authors: Challagulla Swapna , Tarafder Kartick , Ganesan Ramakrishnan , Roy Sounak 
Published: August 2017

AbstractIt is a subject of exploration whether the phase pure anatase or rutile TiO2 or the band alignment due to the heterojunctions in the two polymorphs of TiO2 plays the determining role in efficacy of a photocatalytic reaction. In this work, the phase pure anatase and rutile TiO2 have been explored for photocatalytic nitroarenes reduction to understand the role of surface structures and band alignment towards the reduction mechanism. The conduction band of synthesized anatase TiO2 has been found to be more populated with electrons of higher energy than that of synthesized rutile. This has given the anatase an edge towards photocatalytic reduction of nitroarenes over rutile TiO2. The other factors like adsorption of the reactants and the proton generation did not play any decisive role in catalytic efficacy.
Light color importance for circadian entrainment in a diurnal (Octodon degus) and a nocturnal (Rattus norvegicus) rodent
Authors: Bonmati-Carrion Maria Angeles , Baño-Otalora Beatriz , Madrid Juan Antonio , Rol Maria Angeles 
Published: August 2017

AbstractThe central circadian pacemaker (Suprachiasmatic Nuclei, SCN) maintains the phase relationship with the external world thanks to the light/dark cycle. Light intensity, spectra, and timing are important for SCN synchronisation. Exposure to blue-light at night leads to circadian misalignment that could be avoided by using less circadian-disruptive wavelengths. This study tests the capacity of a diurnalOctodon degusand nocturnalRattus norvegicusto synchronise to different nocturnal lights. Animals were subjected to combined red-green-blue lights (RGB) during the day and to: darkness; red light (R); combined red-green LED (RG) lights; and combined red-green-violet LED (RGV) lights during the night. Activity rhythms free-ran in rats under a RGB:RG cycle and became arrhythmic under RGB:RGV. Degus remained synchronised, despite the fact that day and night-time lighting systems differed only in spectra, but not in intensity. For degus SCN c-Fos activation by light was stronger with RGB-light than with RGV. This could be relevant for developing lighting that reduces the disruptive effects of nocturnal light in humans, without compromising chromaticity.
Shock formation and structure in magnetic reconnection with a streaming flow
Authors: Wu Liangneng , Ma Zhiwei , Zhang Haowei 
Published: August 2017

AbstractThe features of magnetic reconnection with a streaming flow have been investigated on the basis of compressible resistive magnetohydrodynamic (MHD) model. The super-Alfvenic streaming flow largely enhances magnetic reconnection. The maximum reconnection rate is almost four times larger with super-Alfvenic streaming flow than sub-Alfvénic streaming flow. In the nonlinear stage, it is found that there is a pair of shocks observed in the inflow region, which are manifested to be slow shocks for sub-Alfvénic streaming flow, and fast shocks for super-Alfvénic streaming flow. The quasi-period oscillation of reconnection rates in the decaying phase for super-Alfvénic streaming flow is resulted from the different drifting velocities of the shock and the X point.
Real time monitoring of water level and temperature in storage fuel pools through optical fibre sensors
Authors: Rizzolo S. , Périsse J. , Boukenter A. , Ouerdane Y. , Marin E. , Macé J-R. , Cannas M. , Girard S. 
Published: August 2017

AbstractWe present an innovative architecture of a Rayleigh-based optical fibre sensor for the monitoring of water level and temperature inside storage nuclear fuel pools. This sensor, able to withstand the harsh constraints encountered under accidental conditions such as those pointed-out during the Fukushima-Daiichi event (temperature up to 100 °C and radiation dose level up to ~20 kGy), exploits the Optical Frequency Domain Reflectometry technique to remotely monitor a radiation resistant silica-based optical fibre i.e. its sensing probe. We validate the efficiency and the robustness of water level measurements, which are extrapolated from the temperature profile along the fibre length, in a dedicated test bench allowing the simulation of the environmental operating and accidental conditions. The conceived prototype ensures an easy, practical and no invasive integration into existing nuclear facilities. The obtained results represent a significant breakthrough and comfort the ability of the developed system to overcome both operating and accidental constraints providing the distributed profiles of the water level (0–to–5 m) and temperature (20–to–100 °C) with a resolution that in accidental condition is better than 3 cm and of ~0.5 °C respectively. These new sensors will be able, as safeguards, to contribute and reinforce the safety in existing and future nuclear power plants.
Identification of candidate genes for devil facial tumour disease tumourigenesis
Authors: Taylor Robyn L. , Zhang Yiru , Schöning Jennifer P. , Deakin Janine E. 
Published: August 2017

AbstractDevil facial tumour (DFT) disease, a transmissible cancer where the infectious agent is the tumour itself, has caused a dramatic decrease in Tasmanian devil numbers in the wild. The purpose of this study was to take a candidate gene/pathway approach to identify potentially perturbed genes or pathways in DFT. A fusion of chromosome 1 and X is posited as the initial event leading to the development of DFT, with the rearranged chromosome 1 material now stably maintained as the tumour spreads through the population. This hypothesis makes chromosome 1 a prime chromosome on which to search for mutations involved in tumourigenesis. As DFT1 has a Schwann cell origin, we selected genes commonly implicated in tumour pathways in human nerve cancers, or cancers more generally, to determine whether they were rearranged in DFT1, and mapped them using molecular cytogenetics. Many cancer-related genes were rearranged, such as the region containing the tumour suppressor NF2 and a copy gain for ERBB3, a member of the epidermal growth factor receptor family of receptor tyrosine kinases implicated in proliferation and invasion of tumours in humans. Our mapping results have provided strong candidates not previously detected by sequencing DFT1 genomes.
A patterned single layer graphene resistance temperature sensor
Authors: Davaji Benyamin , Cho Hak Dong , Malakoutian Mohamadali , Lee Jong-Kwon , Panin Gennady , Kang Tae Won , Lee Chung Hoon 
Published: August 2017

AbstractMicro-fabricated single-layer graphenes (SLGs) on a silicon dioxide (SiO2)/Si substrate, a silicon nitride (SiN) membrane, and a suspended architecture are presented for their use as temperature sensors. These graphene temperature sensors act as resistance temperature detectors, showing a quadratic dependence of resistance on the temperature in a range between 283 K and 303 K. The observed resistance change of the graphene temperature sensors are explained by the temperature dependent electron mobility relationship (~T−4) and electron-phonon scattering. By analyzing the transient response of the SLG temperature sensors on different substrates, it is found that the graphene sensor on the SiN membrane shows the highest sensitivity due to low thermal mass, while the sensor on SiO2/Si reveals the lowest one. Also, the graphene on the SiN membrane reveals not only the fastest response, but also better mechanical stability compared to the suspended graphene sensor. Therefore, the presented results show that the temperature sensors based on SLG with an extremely low thermal mass can be used in various applications requiring high sensitivity and fast operation.
Activation of an anti-bacterial toxin by the biosynthetic enzyme CysK: mechanism of binding, interaction specificity and competition with cysteine synthase
Authors: Benoni Roberto , Beck Christina M. , Garza-Sánchez Fernando , Bettati Stefano , Mozzarelli Andrea , Hayes Christopher S. , Campanini Barbara 
Published: August 2017

AbstractContact-dependent growth inhibition (CDI) is a wide-spread mechanism of inter-bacterial competition. CDI+bacteria deliver CdiA-CT toxins into neighboring bacteria and produce specific immunity proteins that protect against self-intoxication. The CdiA-CT toxin from uropathogenicEscherichia coli536 is a latent tRNase that is only active when bound to the cysteine biosynthetic enzyme CysK. Remarkably, the CysK:CdiA-CT binding interaction mimics the ‘cysteine synthase’ complex of CysK:CysE. The C-terminal tails of CysE and CdiA-CT each insert into the CysK active-site cleft to anchor the respective complexes. The dissociation constant for CysK:CdiA-CT (Kd~ 11 nM) is comparable to that of theE. colicysteine synthase complex (Kd~ 6 nM), and both complexes bind through a two-step mechanism with a slow isomerization phase after the initial encounter. However, the second-order rate constant for CysK:CdiA-CT binding is two orders of magnitude slower than that of the cysteine synthase complex, suggesting that CysE should outcompete the toxin for CysK occupancy. However, we find that CdiA-CT can effectively displace CysE from pre-formed cysteine synthase complexes, enabling toxin activation even in the presence of excess competing CysE. This adventitious binding, coupled with the very slow rate of CysK:CdiA-CT dissociation, ensures robust nuclease activity in target bacteria.
A Clean and Facile Synthesis Strategy of MoS2 Nanosheets Grown on Multi-Wall CNTs for Enhanced Hydrogen Evolution Reaction Performance
Authors: Cao Jiamu , Zhou Jing , Zhang Yufeng , Liu Xiaowei 
Published: August 2017

AbstractUnique hybrid nanostructure, which consists of multi-wall carbon nanotube (MWCNT) stems and MoS2 nanosheet (NS) leaves, are prepared by a hydrothermal method. The fabricated material can be potentially used as an electrocatalyst for the hydrogen evolution reaction (HER). To our knowledge, as the reaction medium, water is firstly utilized to the synthesis of the 1T phase MoS2 NSs which uniformly grow on the carbon-based materials. As a result, a nanohybrid catalyst with excellent HER electrocatalytic properties, which included an onset potential of as low as 50 mV, a Tafel slope of 43 mV dec−1, and remarkable cycling stability, is produced. The observed outstanding catalytic performance can be attributed to the uniform distribution of the metallic 1T phase of the MoS2 NSs, which are characterized by the presence of multiple active edges as well as the effective electron transport route provided by the conductive MWCNT substrate. This work demonstrates the high potential of the synthesized HER catalyst and proposes a novel, efficient, environmentally friendly, and inexpensive method for its fabrication.
Determination of Phenols Isomers in Water by Novel Nanosilica/Polydimethylsiloxane-Coated Stirring Bar Combined with High Performance Liquid Chromatography-Fourier Transform Infrared Spectroscopy
Authors: Zheng Bei , Li Wentao , Liu Lin , Wang Xin , Chen Chen , Yu Zhiyong , Li Hongyan 
Published: August 2017

AbstractA novel nanosilica/polydimethylsiloxane (SiO2/PDMS) coated stirring bar was adopted in the sorption extraction (SBSE) of phenols in water, and the high performance liquid chromatography-fourier transform infrared spectroscopy (HPLC-FTIR) was subsequently used to determination of phenol concentration. The SiO2/PDMS coating was prepared by sol-gel method and characterized with respect to morphology and specific surface area. The results of field-emission scanning electron microscope (FE-SEM) and N2 adsorption-desorption as well as phenol adsorption experiments denoted that SiO2/PDMS has larger surface area and better adsorption capacity than commercial PDMS. The extraction efficiency of phenol with SiO2/PDMS coated stirring bar was optimized in terms of ion strength, flow rate of phenol-involved influent, type of desorption solvent and desorption time. More than 75% of phenol desorption efficiency could be kept even after 50 cycles of extraction, indicating the high stability of the SiO2/PDMS coated stirring bar. Approximately 0.16 mg/L 2, 5-dimethylphenol (2, 5-DMP), which was 34-fold more toxic than phenol, was detected in water through HPLC-FTIR. However, 2, 5-DMP could be oxidized to 5-methy-2-hydroxy benzaldehyde after disinfection in drinking water treatment process. Therefore, the proposed method of SiO2/PDMS-SBSE-HPLC-FTIR is successfully applied in the analysis of phenols isomers in aqueous environment.
An Essential Role for TAGLN2 in Phagocytosis of Lipopolysaccharide-activated Macrophages
Authors: Kim Hye-Ran , Lee Hyun-Su , Lee Kyung-Sik , Jung In Duk , Kwon Min-Sung , Kim Chang-Hyun , Kim Seong-Min , Yoon Myung-Han , Park Yeong-Min , Lee Sang-Myeong , Jun Chang-Duk 
Published: August 2017

AbstractActivated macrophages have a greater ability of phagocytosis against pathogens that is mediated by large-scale actin rearrangement. However, molecular machineries that conduct this task have not been fully identified. Here, we demonstrate an unanticipated role of TAGLN2, a 22-kDa actin-binding protein, in Toll-like receptor (TLR)-stimulated phagocytosis. TAGLN2 was greatly induced in macrophages in response to lipopolysaccharide (LPS), a ligand for TLR4, partly via the NF-κB pathway. TAGLN2-deficient macrophages (TAGLN2−/−) showed defective phagocytic functions of IgM- and IgG-coated sheep red blood cells as well as bacteria. Cell signaling pathways involved in actin rearrangement—PI3 kinase/AKT and Ras-ERK—were also down-regulated in LPS-stimulated TAGLN2-deficient macrophages. Moreover,TAGLN2−/−mice showed higher mortality after bacterial infection than wild-type littermates. Thus, our results revealed a novel function of TAGLN2 as a molecular armament required for host defense.
The atopic dermatitis blood signature is characterized by increases in inflammatory and cardiovascular risk proteins
Authors: Brunner Patrick M. , Suárez-Fariñas Mayte , He Helen , Malik Kunal , Wen Huei-Chi , Gonzalez Juana , Chan Tom Chih-Chieh , Estrada Yeriel , Zheng Xiuzhong , Khattri Saakshi , Dattola Annunziata , Krueger James G. , Guttman-Yassky Emma 
Published: August 2017

AbstractBeyond classic “allergic”/atopic comorbidities, atopic dermatitis (AD) emerges as systemic disease with increased cardiovascular risk. To better define serum inflammatory and cardiovascular risk proteins, we used an OLINK high-throughput proteomic assay to analyze moderate-to-severe AD (n = 59) compared to psoriasis (n = 22) and healthy controls (n = 18). Compared to controls, 10 proteins were increased in serum of both diseases, including Th1 (IFN-γ, CXCL9, TNF-β) and Th17 (CCL20) markers. 48 proteins each were uniquely upregulated in AD and psoriasis. Consistent with skin expression, AD serum showed up-regulation of Th2 (IL-13, CCL17, eotaxin-1/CCL11, CCL13, CCL4, IL-10), Th1 (CXCL10, CXCL11) and Th1/Th17/Th22 (IL-12/IL-23p40) responses. Surprisingly, some markers of atherosclerosis (fractalkine/CX3CL1, CCL8, M-CSF, HGF), T-cell development/activation (CD40L, IL-7, CCL25, IL-2RB, IL-15RA, CD6) and angiogenesis (VEGF-A) were significantly increased only in AD. Multiple inflammatory pathways showed stronger enrichment in AD than psoriasis. Several atherosclerosis mediators in serum (e.g. E-selectin, PI3/elafin, CCL7, IL-16) correlated with SCORAD, but not BMI. Also, AD inflammatory mediators (e.g. MMP12, IL-12/IL-23p40, CXCL9, CCL22, PI3/Elafin) correlated between blood and lesional as well as non-lesional skin. Overall, the AD blood signature was largely different compared to psoriasis, with dysregulation of inflammatory and cardiovascular risk markers, strongly supporting its systemic nature beyond atopic/allergic association.
Sulfate Reduction in Sediments Produces High Levels of Chromophoric Dissolved Organic Matter
Authors: Luek Jenna L. , Thompson Kaitlyn E. , Larsen Randolph K. , Heyes Andrew , Gonsior Michael 
Published: August 2017

AbstractSulfate reduction plays an important role in altering dissolved organic matter (DOM) in estuarine and coastal sediments, although its role in the production of optically active chromophoric DOM (CDOM) and a subset of fluorescent DOM (FDOM) has not been previously investigated in detail. Freshwater sediment slurries were incubated anaerobically with added sulfate and acetate to promote sulfate-reducing bacteria. Ultraviolet visible (UV-Vis) absorbance and 3-dimensional excitation emission matrix (EEM) fluorescence spectra were measured over a five weeks anaerobic dark incubation period. Parallel Factor Analysis (PARAFAC) of FDOM determined components that increased significantly during dark and anaerobic incubation matching three components previously considered of terrestrially-derived or humic-like origin published in the OpenFluor database. The observed FDOM increase was strongly correlated (R2 = 0.96) with the reduction of sulfate. These results show a direct experimental link between sulfate reduction and FDOM production, which impacts our understanding of coastal FDOM sources and early sediment diagenesis. As 3D fluorescence techniques are commonly applied to diverse systems, these results provide increasing support that FDOM can have many diverse sources not consistently captured by common classifications such as “humic-like” fluorescence.
Risk factors for chronic post-traumatic stress disorder development one year after vaginal delivery: a prospective, observational study
Authors: Sentilhes Loïc , Maillard Françoise , Brun Stéphanie , Madar Hugo , Merlot Benjamin , Goffinet François , Deneux-Tharaux Catherine 
Published: August 2017

AbstractOur study aimed to assess the prevalence of post-traumatic stress disorder (PTSD) after childbirth one year after vaginal delivery and to identify characteristics of women and deliveries associated with it. Questionnaires were mailed a year after delivery to 1103 women with prospectively collected delivery and postpartum data, including a question on day 2 assessing their experience of childbirth. PTSD was assessed a year later by the Impact of Event and Traumatic Event Scales; 22 women (4.2%, 95%CI 2.7–6.3%) met the PTSD diagnostic criteria and 30 (5.7%; 95%CI 3.9–8.0%) PTSD profile criteria. Factors associated with higher risk of PTSD profile were previous abortion (aOR 3.6, 95%CI 1.4–9.3), previous postpartum hemorrhage (Aor 5.3, 95%CI 1.3–21.4), and postpartum hemoglobin <9 g/dl (aOR 2.7, 95%CI 1.0–7.5). Among 56 women (10.3%) reporting bad childbirth memories at day 2 postpartum, 11 (21.1%) met PTSD diagnosis and 11 (21.1%) PTSD profile criteria a year later, compared with 11 (2.4%) (P < 0.001) and 18 (3.8%) (P < 0.001), respectively, of the 489 (87.7%) women with good memories. PTSD is not rare at one year after vaginal delivery in a low-risk population. A simple question at day 2 post partum may identify women most at risk of PTSD and help determine if early intervention is needed.
Bladder Cancer Treatment Response Assessment in CT using Radiomics with Deep-Learning
Authors: Cha Kenny H. , Hadjiiski Lubomir , Chan Heang-Ping , Weizer Alon Z. , Alva Ajjai , Cohan Richard H. , Caoili Elaine M. , Paramagul Chintana , Samala Ravi K. 
Published: August 2017

AbstractCross-sectional X-ray imaging has become the standard for staging most solid organ malignancies. However, for some malignancies such as urinary bladder cancer, the ability to accurately assess local extent of the disease and understand response to systemic chemotherapy is limited with current imaging approaches. In this study, we explored the feasibility that radiomics-based predictive models using pre- and post-treatment computed tomography (CT) images might be able to distinguish between bladder cancers with and without complete chemotherapy responses. We assessed three unique radiomics-based predictive models, each of which employed different fundamental design principles ranging from a pattern recognition method via deep-learning convolution neural network (DL-CNN), to a more deterministic radiomics feature-based approach and then a bridging method between the two, utilizing a system which extracts radiomics features from the image patterns. Our study indicates that the computerized assessment using radiomics information from the pre- and post-treatment CT of bladder cancer patients has the potential to assist in assessment of treatment response.
Association of Matrix Gla protein gene (rs1800801, rs1800802, rs4236) polymorphism with vascular calcification and atherosclerotic disease: a meta-analysis
Authors: Sheng Kaixiang , Zhang Ping , Lin Weiqiang , Cheng Jun , Li Jiawei , Chen Jianghua 
Published: August 2017

AbstractAssociation between the MGP gene rs1800801, rs1800802, rs4236 polymorphisms and vascular calcification and atherosclerotic disease was inconsistent. To clarify precise association, we performed this meta-analysis. Medline, Embase and China Knowledge Resource Integrated Database were systematically searched through December 2016. A total of 23 case-control studies, consisting of 5280 cases and 5773 controls, were included. The overall results suggested that the -7A polymorphism was associated with an increased risk for vascular calcification and atherosclerotic disease in the recessive model (OR = 1.50, 95% CI 1.01–2.24, P = 0.045). Subgroup analyses of Caucasians showed significant associations in the allelic model, recessive model, and homozygote model: allelic model (OR = 1.19, 95% CI 1.06–1.34, P = 0.004), recessive model (OR = 1.60, 95% CI 1.26–2.03, P < 0.001), homozygote model (OR = 1.83, 95% CI 1.18–2.81, P = 0.006). Subgroup analysis of the Asian population did not demonstrate any significant associations in any of the genetic models. No significant association was found in any genetic model amongst the rs1800802 and rs4236 polymorphisms. The findings of this meta-analysis indicate that the MGP gene rs1800801 polymorphism is significantly associated with vascular calcification and atherosclerotic disease, especially in the Caucasian population.
Crows Rival Monkeys in Cognitive Capacity
Authors: Balakhonov Dmitry , Rose Jonas 
Published: August 2017

AbstractThe present study compares the ‘bandwidth of cognition’ between crows and primates. Working memory is the ability to maintain and manipulate information over short periods of time – a core component of cognition. The capacity of working memory is tightly limited, in humans correlated with individual intelligence and commonly used synonymously with cognitive capacity. Crows have remarkable cognitive skills and while birds and mammals share neural principles of working memory, its capacity has not been tested in crows. Here we report the performance of two carrion crows on a working memory paradigm adapted from a recent experiment in rhesus monkeys. Capacity of crows is remarkably similar to monkeys and estimated at about four items. In both species, the visual hemifields show largely independent capacity. These results show that crows, like primates evolved a high-capacity working memory that reflects the result of convergent evolution of higher cognitive abilities in both species.