bluuebunny/crossref_metadata_2025_split huggingface dataset:
Patterns of evolutionary tempo and mode in the radiation ofMelanopsis(Gastropoda; Melanopsidae)
Authors: Geary Dana H. 
Published: July 2016

The Paratethyan basins of eastern Europe and western Asia became isolated from marine influence in the Late Miocene, and were the sites of several remarkable endemic radiations of brackish and freshwater organisms. Here I describe the patterns of tempo and mode before and during the radiation of the gastropodMelanopsisin the Pannonian basin of eastern and central Europe, and I explore the underlying mechanisms of evolutionary change.The most ancient melanopsid species in this area,M. impressa, was present in freshwater areas marginal to the basin well before the radiation. Widely spaced samples ofM. impressaindicate that this species underwent a period of stasis lasting at least 7 m.y. The end of stasis corresponded with the extinction of the last of the normal marine fauna in the basin, suggesting that the lack of other fauna and/or reduced salinity in the basin permitted expansion of the melanopsids from the basin margins into the basin proper. Stasis ended with the onset of changes in size, shouldering, and ontogeny, which led eventually toM. fossilis. Change occurred over a 2-m.y. interval; a series of intermediates is present for all three characters. Within-sample correlations provide no evidence that the three characters are constructionally linked; instead they appear to be changing independently. The mode of change in theM. impressa–M. fossilislineage appears to have been anagenetic. Alterations in the rate and direction of selection (and/or genetic links between characters) are probably required to explain the overall slowness of the change.Most Pannonian basin melanopsid species arose by rapid cladogenesis in the Middle Pannonian Stage. Physical factors in the basin probably influenced the timing of this diversification; contrasting patterns of variation and diversity between two melanopsid clades suggest that intrinsic factors influenced the extent of diversification.
Postmortem changes in strength of gastropod shells: evolutionary implications for hermit crabs, snails, and their mutual predators
Authors: LaBarbera Michael , Merz Rachel Ann 
Published: July 2016

Calliostoma ligatumshells inhabited by hermit crabs were weaker than shells inhabited by snails collected at the same locality. When shells ofC. ligatumwere loaded repetitively to 80% of their predicted failure load, hermit crab-inhabited shells showed an immediate drop in shell strength followed by a progressive further loss of shell strength over the next 18 days. SnailinhabitedC. ligatumshells exhibited a decrease in strength after 9 days, but returned to initial values within 18 days of loading.Hermit crabs thus bear shells significantly weaker than they were when borne by the gastropods that produced them. Reported similarities in vulnerability of gastropods and hermit crabs to shell-crushing predators may be artifacts of the metric (critical size) used to compare vulnerabilities. Hermit crabs probably were a significant factor in the diversification of durophagous predators in the Mesozoic, supplying a prey base identical in size and shape to gastropods but with significantly lower resistance to crushing. The unpredictability of strength in hermit-crab inhabited shells may maintain the apparently inefficient indiscriminate attacks common among durophagous predators.
Survivorship in the Bivalvia: comparing living and extinct genera and families
Authors: Gilinsky Norman L. 
Published: July 2016

George Gaylord Simpson was one of the first paleontologists to apply survivorship analysis to the study of fossil taxa. His finding that the survivorship curve for extant bivalve genera plotted above that for extinct genera led him to conclude that bivalve genera are drawn from at least two distinct distributions of longevities, and formed the fundamental basis for his influential concepts of horotelic and bradytelic evolutionary rates. Survivorship curves presented in this paper show the same pattern of disjunct survivorship in genera from the Treatise on Invertebrate Paleontology and in families from Sepkoski's compendium.Some of the observed differences between survivorship curves are artificial, occurring because long-lived genera and families are more likely to survive to the Recent than short-lived genera and families. The living fauna thus contains a disproportionate number of long-lived genera and families, and the survivorship curve for the living fauna is expected to lie above that for the extinct fauna for this reason alone—even if all longevities are drawn from the same distribution. Recognition of this bias led Raup (1975) to question the significance of the survivorship patterns presented by Van Valen (1973), and Stanley's (1984) acceptance of Raup's argument led him to dismiss the survivorship pattern discovered by Simpson. But statistical analysis using bootstrapping shows that this bias accounts for only a small proportion of the difference between survivorship curves. Other biases considered, such as “pull of the Recent,” “asymmetrical range truncation,” and erroneous concatenation of stratigraphic ranges, do not account for the pattern either. Although still other biases, as yet unknown, cannot definitively be ruled out, it appears that the longevities of extinct and living bivalve taxa are meaningfully different, and that the fundamental causes are biological.
An unusual pattern of divergence between two fossil gastropods: ecophenotypy, dimorphism, or hybridization?
Authors: Geary Dana H. 
Published: July 2016

The temporal dimension of fossil sequences provides a critical component to the study of intraspecific dynamics and species formation. Here I report on the branching and subsequent morphological evolution of two gastropods (Melanopsis fossilisandM. vindobonensis) from the Late Miocene of the Pannonian basin in eastern and central Europe. Although morphological divergence between species is rapid, intermediates between the two species co-occur with typical individuals for approximately 1 m.y. and then disappear. The long-term persistence of intermediates followed by their ultimate disappearance is a pattern that, to my knowledge, has not been previously observed.Distinguishing genetic from ecophenotypic influences on shell form in freshwater prosobranchs is difficult. Nevertheless, consideration of the temporal, geographic, lithologic, and paleoecologic patterns of this sequence suggests that the morphologic differences betweenM. fossilisandM. vindobonensishad some genetic basis. Whether these forms were initially morphs of a single species or two species with some hybridization between them is impossible to determine. In either case, the morphological changes that resulted inM. vindobonensiswere rapid, but the attainment of complete isolation betweenM. fossilisandM. vindobonensisapparently did not occur until approximately 1 m.y. later.
Variation between groups in evolutionary rates: a statistical test of significance
Authors: Raup David M. , Marshall Larry G. 
Published: July 2016

The statistical significance of differences in evolutionary rate between major taxonomic groups is evaluated using conventional chi-square techniques on stratigraphic range data. Romer's (1966) compilation of stratigraphic ranges of fossil mammals is used to determine whether orders differ significantly from each other in generic origination and extinction rates. The evolutionary histories of 2180 genera (primarily Cenozoic in age) are analyzed. Chi-square testing shows that significantly high or low (P ≥ 0.99) extinction or origination occurs in 15% of the testable cases. Significantly high or low evolutionary turnover in a taxon (orders in this case) we term taxotely. Significantly high turnover rate is equivalent to Simpson's tachytely and significantly low turnover is equivalent to his bradytely.In the mammal data set, taxotely is largely attributable to the influence of South American endemics. Some of the effect is interpreted as an artifact of biases in the fossil record (or its study) and some is attributed to real biological aspects of mammalian evolution.
Some distributional models for fossil animals
Authors: Tipper John C. 
Published: July 2016

Models for the areal distribution of marine animals may be formulated in such a way that their validity can be tested statistically. Five such models are described here: in each case the distributions of the individual taxa are made functions of depth of water, oceanicity, and substrate type.The simplest model proposes that benthic species are substrate-dependent: it can be verified by a series of χ2 tests. Benthic species can also be seriated along an environmental gradient: this second model can be tested by using a Monte Carlo simulation procedure. The third model proposes that planktic species are to some degree stratified in the water column, and hence that their remains are distributed additively in the underlying sediments: tests on modern and sub-fossil data sets indicate that realistic versions of this model are probably valueless for most geological work. The final models are extensions of the additive model: they are used here to demonstrate the importance of selecting an appropriate model and, in particular, of knowing the mode of life of each species before the model is selected.
Volatility and the Phanerozoic decline of background extinction intensity
Authors: Gilinsky Norman L. 
Published: July 2016

The well-known decline of global background extinction intensity was caused by the sorting of higher taxonomic groups. Two factors were responsible. First, probabilities of familial origination and extinction in these groups (taxonomic orders) were highly correlated. Groups whose families had high probabilities of origination and extinction tended to have highly volatile diversity paths and, consequently, short life spans. Second, orders with high probabilities of familial origination and extinction were rarely replaced by new high-turnover orders. Thus, because high-turnover orders tended to become extinct without replacement, the global background extinction intensity declined. Since familial origination and extinction probabilities are correlated, global background origination intensity inevitably declined as well. As a consequence of these processes, virtually all groups of organisms now living have low probabilities of familial origination and extinction.Simulations of branching evolution were used to obtain the expected relationships among probabilities (of origination and extinction), volatilities, and longevities for the entire range of possible probabilities, and these relationships were compared to those obtained from the empirical record. In the simulations, only the probabilities of origination and extinction were specified, so volatilities and clade longevities were determined entirely by the probabilities. The similarity between results obtained by simulation and those obtained by analysis of the empirical record further supports the inference that the observed decline of background extinction (and origination) intensity can be explained largely by the loss of high-probability groups to induced volatility.
Early Mesozoic (Late Triassic-Early Jurassic) Tethyan brachiopod biofacies: possible evolutionary intra-phylum niche replacement within the Brachiopoda
Authors: Sandy Michael R. 
Published: July 2016

Distributions of brachiopods from low-latitude paleogeographic settings, primarily in the Tethyan Ocean of southern Europe, with additional data from North America allow some observations on the bathymetric distribution of early Mesozoic brachiopod orders. Norian and latest Triassic (Rhaetian) brachiopod biofacies are dominated in shallowest waters by short-looped terebratulids (Terebratulidina) while spire-bearing athyrids (Athyrida) are common components of deeper-water environments in the latest Triassic. In the late Early Jurassic (Pliensbachian), shallow-water brachiopod faunas are dominated by rhynchonellids, short-looped terebratulids are commoner in relatively deeper shelf waters, and spiriferids and long-looped terebratulids (Terebratellidina) are abundant in deeper-water shelf environments.Following the end-Triassic extinction event there appears to be niche-replacement in deep-water shelf environments of Late Triassic athyrids by spiriferids and long-looped terebratulids in the Early Jurassic. Rhynchonellids appear to have diversified into shallowest water environments; specialized short-looped terebratulids may have occupied deeper-water niches that resulted ultimately in the success of the enigmatic Pygopidae later in the Jurassic and Cretaceous.
The life orientation of concavo-convex brachiopods: overturning the paradigm
Authors: Lescinsky Halard L. 
Published: July 2016

Concavo-convex brachiopods are generally assumed to have lived with their convex valves against the sediment. This orientation is based primarily on the a priori assumption that the upturned commissure would prevent fouling of the brachiopods' mantle cavity. Here, I present epibiontic and taphonomic evidence from orthids and nonproductid strophomenids that concavo-convex brachiopods lived in the reverse life orientation, with the convex valve on top.Ten testable epibiontic and taphonomic criteria are proposed to establish the uppermost valve during encrustation and whether epibionts encrusted primarily live or dead hosts. The criteria are evaluated for 11 collections of Ordovician and Devonian nonproductid concavo-convex brachiopods that contain a total of over 500 brachiopods and 4000 epibionts. In all cases, the results support a convex-up orientation and the encrustation of live hosts. Five criteria concern epibiont growth patterns and show that (1) epibionts predominate on convex valves, (2) epibionts are not restricted to shell margins, (3) distinct exposed and cryptic faunas, as predicted theoretically and described in previous studies, exist on convex and concave valves respectively, (4) epibiont colonies were often truncated by the commissures and hinges of live hosts, and (5) growth patterns of some epibionts indicate live hosts. Five taphonomic criteria show that (1) concavo-convex shells have greater epibiont cover than other morphologies, (2) internal surfaces of disarticulated specimens are rarely encrusted, (3) interiors of articulated specimens are rarely mud-filled, (4) standard taphofacies indicators suggest little postmortem exposure, and (5) sedimentological reconstructions suggest rapid burial.Convex-up brachiopods suggest that the Paleozoic mud bottoms they lived on were probably firmer than usually assumed and that a more complex functional interpretation of concavo-convexity is required. Hydrodynamic stability was important to many concavo-convex, plano-convex, and unequally bi-convex brachiopods. Brachiopods with these morphologies probably lived in the more stable orientation on their concave or flat valve. Productid brachiopods, although also concavo-convex, lived convex valve down and are ecologically distinct from earlier concavo-convex taxa. Productids were anchored, semi-infaunally, by spines and were more similar to Mesozoic oysters in orientation and shell function.
The evolutionary bootstrap: a new approach to the study of taxonomic diversity
Authors: Gilinsky Norman L. , Bambach Richard K. 
Published: July 2016

The evolutionary bootstrap is a new approach to the analysis of patterns of taxonomic diversity. In general, the evolutionary bootstrap works by surveying the diversity history of a taxon, learning its dynamic properties, and then generating randomly large numbers of artificial diversity histories based upon what was learned. The distribution of artificial—or bootstrapped—diversity histories approximates the distribution of diversity histories that were possible for taxa with the dynamic properties of the real taxon, and serves as a paleontological null hypothesis for studying statistically the diversity history of the real taxon.Two null hypotheses were established, the additive and the multiplicative. The additive null hypothesis assumes that the amount of diversity change that occurs in a higher taxon during an interval of time isindependentof the number of member subtaxa present at the beginning of the interval. The multiplicative null hypothesis, in contrast, assumes that the amount of diversity change that occurs isdependentupon the number of member subtaxa present at the start. Thus the two null hypotheses represent end members of a diversity-independent/diversity-dependent continuum of possibilities.Detailed analyses using the evolutionary bootstrap, in conjunction with the clade statistics of Gould et al. (1977), show that several of the 17 higher taxa studied have diversity histories that are statistically significantly different from the random expectation under one or both null hypotheses. Analyses of multiple taxa in aggregate also reveal several properties of diversity histories that are statistically significantly different from random. Real taxa tend to have higher uniformities and lower maximum diversities than expected under the multiplicative null hypothesis. They have lower uniformities, higher maximum diversities, and longer durations than expected under the additive null hypothesis. And, they have lower centers of gravity than expected under either null hypothesis. Overall, the results provide a possible statistical verification of the process of taxonomic (traditionally, adaptive) radiation and suggest the need to consider deterministic explanations for observed diversity patterns.
Modern vertebrate tracks from Lake Manyara, Tanzania and their paleobiological implications
Authors: Cohen Andrew S. , Halfpenny James , Lockley Martin , Michel Ellinor 
Published: July 2016

We studied mammal and bird track formation at the northern edge of Lake Manyara, Tanzania, to develop models for interpreting fossil tracks and trackways. Lake Manyara is a closed-basin, alkaline lake in the East African Rift System. The area has a high vertebrate diversity, allowing us to investigate tracks in an environment similar to that of many ancient track-bearing sequences. Three study sites, two on mud flats adjacent to the lake margin and a third on a delta floodplain, provided contrasting environments in which to assess the types of biological data that can potentially be extracted from fossil trackways.Our censuses of mammals and their tracks revealed that most species that occur within the study area leave a track record, and that common species leave abundant tracks, although numbers of trackways are not proportional to numbers of individuals. Logarithmic increases in track sampling area yield a linear increase in the proportion of both the medium and large-sized local mammals represented in a track record. Transect vs. area mapping methods produced different censusing results, probably because of differences in monitoring periods and areal coverage.We developed a model of expected track production rates that incorporates activity budget and stride length data in addition to abundance data. By using these additional variables in a study of diurnal birds, we obtained a much better estimator relating track abundance to trackmaker abundance than that provided by census data alone. Proportions of different types of tracks predicted by the model differ significantly from the observed proportions, almost certainly because of microenvironmental differences between the censusing and track counting localities. Censuses of fossil tracks will be biased toward greater numbers of depositional-environment generalists and away from habitat-specific species.Trackways of migratory animals were dominantly shoreline-parallel, whereas trackways of sedentary species were more variable. A strong shoreline-parallel environmental zonation at the Alkaline Flats site exerted an influence on trackmaker distribution patterns, initial track formation, and track preservation. Variations in habitat usage by different species, as well as species abundance and directionality of movement, were all important in determining the number of preservable tracks a species produced within a given environmental zone.Fossil trackways are time-averaged, although over entirely different temporal scales than are bones. Unlike bones, tracks are not space-averaged. Therefore, wherever possible, fossil track and bone studies should be used to complement each other, as they provide fundamentally different pictures of paleocommunities. Tracks provide “snapshot” views of localized assemblages of organisms useful in reconstructing autecological relationships, whereas bones yield a broader image of a local fauna in which seasonal and microenvironmental variation are more commonly smoothed out.
Hierarchies in biology and paleontology
Authors: Valentine James W. , May Cathleen L. 
Published: July 2016

Hierarchies in natural science are ranked and nested structures such that units at each rank include parts that are units at lower ranks. Hierarchies are able to render complexity tractable, by homogenizing units into collectives and by ordering collectives in ranks of increasing inclusiveness. Hierarchies contrast with positional structures, such as phylogenetic trees, for in trees all positions are occupied by the same sort of entity—there are no ranked collectives—and positions are specified by the order of appearance or precedence of the entities. In hierarchies, interactions within ranks are most important; in trees, sequences of events along branches are of primary concern. As a result hierarchies do, and trees do not, display emergent properties.The value of the hierarchical structure can be lost when ranks are misspecified. A common error is the use of only a fraction of entities that actually occur in a rank, as when genes are considered as a rank below cells, disregarding the remaining cell contents and rendering the nature of cellular organization moot. Misspecification is also common when attributes or processes are used in ranks without indications of the physical entities to which they refer, thus losing track of the proper composition and ranking of the collectives.
Morphological diversification of Ptychopariida (Trilobita) from the Marjumiid biomere (Middle and Upper Cambrian)
Authors: Sundberg Frederick A. 
Published: July 2016

Ptychopariid trilobites from the Marjumiid biomere of Laurentia underwent a statistically significant morphological diversification that is concordant with proposed adaptive radiations of trilobites in each of the Cambrian biomeres. An analysis of a subset consisting of the biomere's most characteristic taxa, the Asaphiscacea, Raymondinacea, and Marjumiacea, also illustrates this morphological diversification. In detail, the total data set and subset show a limited range of morphologies near the base of the biomere and a large increase in range in the upper portion of the biomere.Regional assemblages from the Appalachians, Great Basin, and Texas were also studied to determine if they too show the larger-scale macroevolutionary patterns of trilobites from Laurentia as a whole. The regional assemblages illustrate similar, butnot identical, morphological diversifications, which are also similar to the overall Laurentian pattern. Subsets of the characteristic taxa also show this diversification. These results suggest that regional assemblages can be used to investigate these larger-scale macroevolutionary patterns.Causal mechanisms for the diversification patterns are not clear. Potential mechanisms include: (1) endemic evolution of new morphologies in Laurentia; (2) migration of new morphologies, including intra- and inter-continental migrations; and (3) environmental controls over the distribution of morphologies. Likely causes for the morphological diversification and its similarity among regions probably include aspects of all three mechanisms.