bluuebunny/crossref_metadata_2025_split huggingface dataset:
LSD1 modulates the non-canonical integrin β3 signaling pathway in non-small cell lung carcinoma cells
Authors: Lim So-Young , Macheleidt Iris , Dalvi Priya , Schäfer Stephan C. , Kerick Martin , Ozretić Luka , Ortiz-Cuaran Sandra , George Julie , Merkelbach-Bruse Sabine , Wolf Jürgen , Timmermann Bernd , Thomas Roman K. , Schweiger Michal R. , Buettner Reinhard , Odenthal Margarete 
Published: August 2017

AbstractThe epigenetic writer lysine-specific demethylase 1 (LSD1) is aberrantly upregulated in many cancer types and its overexpression correlates with poor survival and tumor progression. In this study, we analysed LSD1 function in non-small cell lung cancer adenocarcinomas. Expression profiling of 182 cases of lung adenocarcinoma proved a significant correlation of LSD1 overexpression with lung adenocarcinoma progression and metastasis. KRAS-mutated lung cancer cell clones were stably silenced for LSD1 expression. RNA-seq and comprehensive pathway analysis revealed, that genes related to a recently described non-canonical integrin β3 pathway, were significantly downregulated by LSD1 silencing. Hence, invasion and self-renewal capabilities were strongly decreased. Notably, this novel defined LSD1/integrin β3 axis, was also detected in human lung adenocarcinoma specimens. Furthermore, the linkage of LSD1 to an altered expression pattern of lung-lineage specific transcription factors and genes, which are involved in alveolar epithelial differentiation, was demonstrated. Thus, our findings point to a LSD1-integrin β3 axis, conferring attributes of invasiveness and tumor progression to lung adenocarcinoma.
Persistent anomalies of the extratropical Northern Hemisphere wintertime circulation as an initiator of El Niño/Southern Oscillation events
Authors: Anderson Bruce T. , Hassanzadeh Pedram , Caballero Rodrigo 
Published: August 2017

AbstractClimates across both hemispheres are strongly influenced by tropical Pacific variability associated with the El Niño/Southern Oscillation (ENSO). Conversely, extratropical variability also can affect the tropics. In particular, seasonal-mean alterations of near-surface winds associated with the North Pacific Oscillation (NPO) serve as a significant extratropical forcing agent of ENSO. However, it is still unclear what dynamical processes give rise to year-to-year shifts in these long-lived NPO anomalies. Here we show that intraseasonal variability in boreal winter pressure patterns over the Central North Pacific (CNP) imparts a significant signature upon the seasonal-mean circulations characteristic of the NPO. Further we show that the seasonal-mean signature results in part from year-to-year variations in persistent, quasi-stationary low-pressure intrusions into the subtropics of the CNP, accompanied by the establishment of persistent, quasi-stationary high-pressure anomalies over high latitudes of the CNP. Overall, we find that the frequency of these persistent extratropical anomalies (PEAs) during a given winter serves as a key modulator of intraseasonal variability in extratropical North Pacific circulations and, through their influence on the seasonal-mean circulations in and around the southern lobe of the NPO, the state of the equatorial Pacific 9–12 months later.
Phenology-dependent variation in the non-structural carbohydrates of broadleaf evergreen species plays an important role in determining tolerance to defoliation (or herbivory)
Authors: Chen Zhicheng , Wang Lin , Dai Yongxin , Wan Xianchong , Liu Shirong 
Published: August 2017

AbstractTwo broadleaf evergreen canopy species (Schima superbaandEngelhardia roxburghiana) with different phenologies in a subtropical region of southern China were used to determine the influence of leaf phenology on the impact of an insect pest attack.S.superbaregenerates its leaves in February, whileE.roxburghianaregenerates its leaves in May. The mothThalassodes quadrariaattacked the two broadleaf evergreen species in March to April, and the newly produced leaves were removed forS.superbabut not forE.roxburghiana. The young trees were artificially defoliated to imitate an insect pest attack during March 2014. Nonstructural carbohydrate (NSC) and growth measurements and a retrospective analysis based on the radial growth of mature trees were conducted in January 2015. The results showed that NSC concentrations decreased inS.superbaduring canopy rebuilding, and the subsequent defoliation severely inhibited leaf and shoot growth, prevented NSC restoration in roots and stem xylem, and caused high mortality. The insect outbreaks reduced the radial growth ofS.superba. In contrast,E.roxburghianaexperienced less growth retardation, lower mortality, and normal radial growth. Thus, taking phenology-dependent variation in NSCs into consideration, defoliation and insect pest outbreaks more negatively impactedS.superbathanE.roxburghiana.
Unraveling variations of crystalline cellulose induced by ionic liquid and their effects on enzymatic hydrolysis
Authors: Ling Zhe , Chen Sheng , Zhang Xueming , Takabe Keiji , Xu Feng 
Published: August 2017

AbstractIonic liquid (IL) is one of the pretreatment processes gaining considerable interests to remove the native recalcitrance of lignocellulose. But the cellulose crystalline transformation during the pretreatment and their correlations with enzymatic digestibility have not been fully elucidated. Microcrystalline cellulose (Avicel) and holocellulose, which have differential sources and original crystallinity, were respectively pretreated with 1-butyl-3-methylimidazolium chloride ([C4min]Cl). Cellulose crystalline variations as well as chemical and morphological changes were determined. Crystallinity of different materials was proved to influence the effects of pretreatment and following enzymatic digestibility. Recrystallized cellulose Iβ was revealed from slight initial cellulose Iα of Avicel, which was accomplished via formation of intermediate paracrystalline phases. The conversion yield of IL pretreated Avicel displayed no obvious changes, mainly resulted from initial high crystalline order and the recrystallization behavior. Recalcitrance of holocellulose was destroyed during cellulose allomorph transformation and hemicelluloses extraction, contributing to significant increase of glucose yield up to 92.20%. Explicit comprehension on cellulose supramolecular structure may help provide more efficient process for bioconversion after IL pretreatment.
A hybrid resistive pulse-optical detection platform for microfluidic experiments
Authors: Hinkle Preston , Westerhof Trisha M. , Qiu Yinghua , Mallin David J. , Wallace Matthew L. , Nelson Edward L. , Taborek Peter , Siwy Zuzanna S. 
Published: August 2017

AbstractResistive-pulse sensing is a label-free method for characterizing individual particles as they pass through ion-conducting channels or pores. During a resistive pulse experiment, the ionic current through a conducting channel is monitored as particles suspended in the solution translocate through the channel. The amplitude of the current decrease during a translocation, or ‘pulse’, depends not only on the ratio of the particle and channel sizes, but also on the particle position, which is difficult to resolve with the resistive pulse signal alone. We present experiments of simultaneous electrical and optical detection of particles passing through microfluidic channels to resolve the positional dependencies of the resistive pulses. Particles were tracked simultaneously in the two signals to create a mapping of the particle position to resistive pulse amplitude at the same instant in time. The hybrid approach will improve the accuracy of object characterization and will pave the way for observing dynamic changes of the objects such as deformation or change in orientation. This combined approach of optical detection and resistive pulse sensing will join with other attempts at hybridizing high-throughput detection techniques such as imaging flow cytometry.
Effect of cortisol diurnal rhythm on emotional memory in healthy young adults
Authors: Nagamine Mitsue , Noguchi Hiroko , Takahashi Nobuaki , Kim Yoshiharu , Matsuoka Yutaka 
Published: August 2017

AbstractFew studies have investigated the relationship between cortisol diurnal rhythm and cognitive function in healthy young adults, especially for emotional memory. To address this deficiency, this study examined the effect of diurnal cortisol slope (DCS) and heart rate variability (HRV) on emotional memory. Participants included healthy volunteers (44 men and 23 women; mean age 20.60 yrs). Participants were shown emotionally arousing slides and were asked to return to the laboratory one week later where they were given a “surprise” memory test to examine their emotional memory retention. Participants were asked to collect saliva samples at four time points (08:00, 11:00, 15:00, and 20:00) on the experimental days; these samples were used to calculate the DCS. Moreover, HRV was measured during the experiment. The multiple linear regression analysis revealed that declarative memory ability, sleep duration, and the DCS were the final significant determinants for emotional memory enhancement (B = −20.41, 0.05, −48.20, ps < 0.05), with participants having flatter cortisol slopes showing reduced or absent emotional memory enhancement. These findings are discussed in reference to the possible effects of diurnal rhythm mechanisms of the hypothalamus-pituitary-adrenal axis and the autonomic nervous system on emotional memory.
Association of the PLCB1 gene with drug dependence
Authors: Cabana-Domínguez Judit , Roncero Carlos , Pineda-Cirera Laura , Palma-Álvarez R. Felipe , Ros-Cucurull Elena , Grau-López Lara , Esojo Abderaman , Casas Miquel , Arenas Concepció , Ramos-Quiroga Josep Antoni , Ribasés Marta , Fernàndez-Castillo Noèlia , Cormand Bru 
Published: August 2017

AbstractGenetic factors involved in the susceptibility to drug addiction still remain largely unknown. MiRNAs seem to play key roles in the drug-induced plasticity of the brain that likely drives the emergence of addiction. In this work we explored the role of miRNAs in drug addiction. With this aim, we selected 62 SNPs located in the 3’UTR of target genes that are predicted to alter the binding of miRNA molecules and performed a case-control association study in a Spanish sample of 735 cases (mainly cocaine-dependent subjects with multiple drug dependencies) and 739 controls. We found an association between rs1047383 in the PLCB1 gene and drug dependence that was replicated in an independent sample (663 cases and 667 controls). Then we selected 9 miRNAs predicted to bind the rs1047383 region, but none of them showed any effect on PLCB1 expression. We also assessed two miRNAs binding a region that contains a SNP in linkage disequilibrium with rs1047383, but although one of them, hsa-miR-582, was found to downregulate PLCB1, no differences were observed between alleles. Finally, we explored the possibility that PLCB1 expression is altered by cocaine and we observed a significant upregulation of the gene in the nucleus accumbens of cocaine abusers and in human dopaminergic-like neurons after cocaine treatment. Our results, together with previous studies, suggest that PLCB1 participates in the susceptibility to drug dependence.
WS2 and MoS2 biosensing platforms using peptides as probe biomolecules
Authors: Sun Xiuxia , Fan Jun , Fu Caihong , Yao Linyan , Zhao Sha , Wang Jie , Xiao Jianxi 
Published: August 2017

AbstractBiosensors based on the two-dimensional layered nanomaterials transition metal dichalcogenides such as WS2 and MoS2 have shown broad applications, while they largely rely on the utilization of single stranded DNA as probe biomolecules. Herein we have constructed novel WS2- and MoS2- based biosensing platforms using peptides as probe biomolecules. We have revealed for the first time that the WS2 and MoS2 nanosheets display a distinct adsorption for Arg amino acid and particularly, Arg-rich peptdies. We have demonstrated that the WS2 and MoS2 dramatically quench the fluorescence of our constructed Arg-rich probe peptide, while the hybridization of the probe peptide with its target collagen sequence leads to the fluorescence recovery. The WS2-based platform provides a sensitive fluorescence-enhanced assay that is highly specific to the target collagen peptide with little interferences from other proteins. This assay can be applied for quantitative detection of collagen biomarkers in complex biological fluids. The successful development of WS2- and MoS2- based biosensors using non-ssDNA probes opens great opportunities for the construction of novel multifunctional biosensing platforms, which may have great potential in a wide range of biomedical field.
Glucocorticoids are lower at delivery in maternal, but not cord blood of obese pregnancies
Authors: Stirrat Laura I. , Just George , Homer Natalie Z. M. , Andrew Ruth , Norman Jane E. , Reynolds Rebecca M. 
Published: August 2017

AbstractGlucocorticoids are vital for lung maturation. We previously showed that cortisol is lower in obese pregnancy. Whether this is maintained at delivery is unknown but is clinically relevant as maternal and cord blood cortisol levels are correlated and offspring of obese are more likely to need neonatal respiratory support. We hypothesized that glucocorticoids are lower in maternal and cord blood at delivery in obese pregnancies. Glucocorticoids (cortisol and corticosterone) and their inactive versions (cortisone and 11-dehydrocorticosterone) were measured by LC-MS/MS in maternal and cord plasma from 259 Caucasian women at delivery (BMI 18–55 kg/m2). Analyses adjusted for labour status, delivery mode, offspring gender, birthweight and gestational age. Cortisol and corticosterone were significantly higher in maternal than cord blood. Inactive versions were significantly higher in cord than maternal blood. Increased maternal BMI associated with lower maternal cortisol, corticosterone and 11-dehydrocorticosterone. Despite significant positive correlations between maternal and cord blood glucocorticoid levels, increased maternal BMI was not associated with lower cord blood glucocorticoid levels. Conditions at delivery may overcome any potential negative effects of low maternal glucocorticoids on the fetus in the short-term. This may not preclude the longer-term effects of fetal exposure to lower glucocorticoid levels during obese pregnancy.
A CDC42-centered signaling unit is a dominant positive regulator of endothelial integrity
Authors: Amado-Azevedo J. , Reinhard N. R. , van Bezu J. , de Menezes R. X. , van Beusechem V. W. , van Nieuw Amerongen G. P. , van Hinsbergh V. W. M. , Hordijk P. L. 
Published: August 2017

AbstractEndothelial barrier function is carefully controlled to protect tissues from edema and damage inflicted by extravasated leukocytes. RhoGTPases, in conjunction with myriad regulatory proteins, exert both positive and negative effects on the endothelial barrier integrity. Precise knowledge about the relevant mechanisms is currently fragmented and we therefore performed a comprehensive analysis of endothelial barrier regulation by RhoGTPases and their regulators. Combining RNAi with electrical impedance measurements we quantified the relevance of 270 Rho-associated genes for endothelial barrier function. Statistical analysis identified 10 targets of which six promoted- and four reduced endothelial barrier function upon downregulation. We analyzed in more detail two of these which were not previously identified as regulators of endothelial integrity. We found that the Rac1-GEF (Guanine nucleotide Exchange Factor) TIAM2 is a positive regulator and the Cdc42(Rac1)-GAP (GTPase-Activating Protein) SYDE1 is a negative regulator of the endothelial barrier function. Finally, we found that the GAP SYDE1 is part of a Cdc42-centered signaling unit, also comprising the Cdc42-GEF FARP1 and the Cdc42 effector PAK7 which controls the integrity of the endothelial barrier. In conclusion, using a siRNA-based screen, we identified new regulators of barrier function and found that Cdc42 is a dominant positive regulator of endothelial integrity.
Dopaminergic Modulation of Biological Motion Perception in patients with Parkinson’s disease
Authors: Liu Tingting , Hu Panpan , Cao Ruihua , Ye Xing , Tian Yanghua , Chen Xianwen , Wang Kai 
Published: August 2017

AbstractParkinson’s disease (PD) is a progressive neurodegenerative disorder pathologically characterized by a selective loss of dopaminergic neurons in the substantia nigra. In previous studies, greater attention was paid to impairments in motor disturbances in contrast to impairments of cognitive function in PD that was often ignored. In present study, a duration discrimination paradigm was used to assess global and local biological motion (BM) perception in healthy controls(HCs) and PD patients with and without dopamine substitution treatment (DST). Biological motion sequences and inanimate motion sequences (inverted BM sequences) were sequentially presented on a screen. Observers were required to verbally make a 2-alternative forced-choice to indicate whether the first or second interval appeared longer. The stimuli involved global and local BM sequences. Statistical analyses were conducted on points of subjective equality (PSE). We found significant differences between untreated PD patients and HCs as well as differences between global and local BM conditions. PD patients have a deficit in both global and local BM perception. Nevertheless, these two BM conditions can be improved under DST. Our data indicates that BM perception may be damaged in PD patients and dopaminergic medication is conducive to maintain the BM perception in PD patients.
Transferrin-navigation Nano Artificial Antibody Fluorescence Recognition of Circulating Tumor Cells
Authors: Zhang Wei , Wang Jiaoyang , Li Ping , Wu Chuanchen , Zhang Hongyan , Zhang Wen , Wang Hui , Tang Bo 
Published: August 2017

AbstractSpecific recognition of circulating tumor cells (CTCs) is of great significance for cancer diagnosis and personalized therapy. The antibodies and aptamer are commonly used for recognition of CTCs, but they often suffer from low stability and high cost. Therefore, chemically stable and low-cost artificial recognition elements are still highly demanded. Herein, we prepared nano artificial antibody based on molecular imprinting and applied for fluorescence recognition of CTCs. Surface imprinting was employed to construct a transferrin (TRA)-imprinted layer on the surface of rhodamine doped silica nanoparticles. Take advantage of the specific interaction between TRA and TRA receptor (overexpressed on cancer cells), the as-prepared TRA-imprinted artificial antibody was allowed for specific targeting cancer cells mediated by TRA. And the average recognition efficiency of the artificial antibody for the cancer cells was 88% through flow cytometry. Finally, the nano artificial antibody was successfully applied to specific identify mimetic CTCs, under the same conditions, the recognition ability of artificial antibody for CTCs was 8 times higher than the white blood cells.
InGaP (GaInP) mesa p-i-n photodiodes for X-ray photon counting spectroscopy
Authors: Butera S. , Lioliou G. , Krysa A. B. , Barnett A. M. 
Published: August 2017

AbstractIn this paper, for the first time an InGaP (GaInP) photon counting X-ray photodiode has been developed and shown to be suitable for photon counting X-ray spectroscopy when coupled to a low-noise charge-sensitive preamplifier. The characterisation of two randomly selected 200 μm diameter and two randomly selected 400 μm diameter In0.5Ga0.5P p+-i-n+ mesa photodiodes is reported; the i-layer of the p+-i-n+ structure was 5 μm thick. At room temperature, and under illumination from an 55Fe radioisotope X-ray source, X-ray spectra were accumulated; the best spectrometer energy resolution (FWHM) achieved at 5.9 keV was 900 eV for the 200 μm In0.5Ga0.5P diameter devices at reverse biases above 5 V. System noise analysis was also carried out and the different noise contributions were computed.
Detection of dynamic substrate binding using MRI
Authors: Yadav Nirbhay N. , Yang Xing , Li Yuguo , Li Wenbo , Liu Guanshu , van Zijl Peter C. M. 
Published: August 2017

AbstractMagnetic Resonance Imaging (MRI) is rarely used for molecular binding studies and never without synthetic metallic labels. We designed an MRI approach that can specifically detect the binding of natural substrates (i.e. no chemical labels). To accomplish such detection of substrate-target interaction only, we exploit (i) the narrow resonance of aliphatic protons in free substrate for selective radio-frequency (RF) labeling and, (ii) the process of immobilisation upon binding to a solid-like target for fast magnetic transfer of this label over protons in the target backbone. This cascade of events is ultimately detected with MRI using magnetic interaction between target and water protons. We prove this principle using caffeine as a substrate in vitro and then apply it in vivo in the mouse brain. The combined effects of continuous labeling (label pumping), dynamic reversible binding, and water detection was found to enhance the detection sensitivity by about two to three orders of magnitude.
Origin of colossal dielectric response in (In + Nb) co-doped TiO2 rutile ceramics: a potential electrothermal material
Authors: Ke Shanming , Li Tao , Ye Mao , Lin Peng , Yuan Wenxiang , Zeng Xierong , Chen Lang , Huang Haitao 
Published: August 2017

Abstract(In + Nb) co-doped TiO2 (TINO) rutile is an emerging material with a colossal dielectric permittivity (CP) and a low dielectric loss over wide temperature and frequency ranges. The electrical inhomogeneous nature of TINO ceramics is demonstrated by direct local current probing with high-resolution conductive atomic force microscopy (cAFM). The CP response in TINO is found to originate from the electron-pinned defect dipole induced conductive cluster effect and the electrode effect. Two types of dielectric relaxations are simultaneously observed due to these two effects. With the given synthesis condition, we found TINO shows a highly leaky feature that impairs its application as a dielectric material. However, the fast-temperature-rising phenomenon found in this work may open a new door for TINO to be applied as a potential electrothermal material with high efficiency, oxidation-proof, high temperature stability, and energy saving.
Reducing the Dispersion of Periodic Structures with Twist and Polar Glide Symmetries
Authors: Dahlberg O. , Mitchell-Thomas R. C. , Quevedo-Teruel O. 
Published: August 2017

AbstractIn this article, a number of guiding structures are proposed which take advantage of higher symmetries to vastly reduce the dispersion. These higher symmetries are obtained by executing additional geometrical operations to introduce more than one period into the unit cell of a periodic structure. The specific symmetry operations employed here are a combination of p-fold twist and polar glide. Our dispersion analysis shows that a mode in a structure possessing higher symmetries is less dispersive than in a conventional structure. It is also demonstrated that, similar to the previously studied Cartesian glide-symmetric structures, polar glide-symmetric structures also exhibit a frequency independent response. Promising applications of these structures are leaky-wave antennas which utilize the low frequency dependence.