bluuebunny/crossref_metadata_2025_split huggingface dataset:
Labile organic carbon pools and enzyme activities of Pinus massoniana plantation soil as affected by understory vegetation removal and thinning
Authors: Shen Yafei , Cheng Ruimei , Xiao Wenfa , Yang Shao , Guo Yan , Wang Na , Zeng Lixiong , Lei Lei , Wang Xiaorong 
Published: January 2018

AbstractThe effects of forest management on carbon (C) sequestration are poorly understood, particularly in the Three Gorges Reservoir area. We aimed to identify the effects of forest management on C sequestration in Pinus massoniana plantations. An intact control forest (CK), a site undergoing regular shrub cutting with the simultaneous removal of residues (SC), a site under low-intensity thinning (LIT), and a site under high-intensity thinning (HIT) were compared for soil labile organic carbon (LOC), related enzyme activities, and soil characteristics. Soil organic carbon (SOC) significantly decreased in the HIT treatment as compared with that in the CK treatment. Soil EOC, DOC, MBC contents in treated plots were higher than those in the CK treatment; particularly, the HIT treatment significantly increased those values in 0–10 cm layer. Thinning resulted in a decrease in cellulase and amylase activities, but an increase in invertase activity. In addition, the SOC content was significantly correlated with four enzymes activities and LOC components, which suggested that the soil LOC components and enzymes activities were sensitive to the changes of SOC. Our results suggest that high-intensity thinning treatment in Pinus massoniana plantation could significantly decrease the SOC content and lead to an increase of LOC components.
Over-expression of a retinol dehydrogenase (SRP35/DHRS7C) in skeletal muscle activates mTORC2, enhances glucose metabolism and muscle performance
Authors: Ruiz Alexis , Dror Erez , Handschin Christoph , Furrer Regula , Perez-Schindler Joaquin , Bachmann Christoph , Treves Susan , Zorzato Francesco 
Published: January 2018

AbstractSRP-35 is a short-chain dehydrogenase/reductase belonging to the DHRS7C dehydrogenase/ reductase family 7. Here we show that its over-expression in mouse skeletal muscles induces enhanced muscle performance in vivo, which is not related to alterations in excitation-contraction coupling but rather linked to enhanced glucose metabolism. Over-expression of SRP-35 causes increased phosphorylation of AktS473, triggering plasmalemmal targeting of GLUT4 and higher glucose uptake into muscles. SRP-35 signaling involves RARα and RARγ (non-genomic effect), PI3K and mTORC2. We also demonstrate that all-trans retinoic acid, a downstream product of the enzymatic activity of SRP-35, mimics the effect of SRP-35 in skeletal muscle, inducing a synergistic effect with insulin on AKTS473 phosphorylation. These results indicate that SRP-35 affects skeletal muscle metabolism and may represent an important target for the treatment of metabolic diseases.
Framing Continental Shelf Waves in the southern Adriatic Sea, a further flushing factor beyond dense water cascading
Authors: Bonaldo Davide , Orlić Mirko , Carniel Sandro 
Published: January 2018

AbstractContinental Shelf Waves (CSWs) are oscillatory phenomena migrating along the continental margins, controlled by the interplay of rotation and bathymetric gradients. Here we combine observational data from five moored current meters and high-resolution hydrodynamic model fields for describing the generation and propagation of CSWs along the Southern Adriatic Margin (SAM, eastern Mediterranean Sea), where the possibility of their occurrence has been theoretically hypothesised but not experimentally observed up to now. Results show that in spring 2012 a train of CSWs with 35–87 km wavelength and 2–4 day period was generated on the northern sectors of the SAM and propagated southwards along its western slope. Along their path, CSWs modify their apparent frequency and oscillation mode as an effect of the background current and scattering caused by changes in the continental margin morphology. This signal appears as a persistent feature triggered by the inflow of a dense water vein formed in the northern Adriatic Sea, propagating upwelling and downwelling patterns along broad sectors of the continental slope. CSWs thus appear as an additional remote-controlled mechanism for cross-shelf exchange of water, sediment and nutrients in the SAM, besides the well-acknowledged dense water downflow along preferential pathways driven by local topographic constraints.
Enhanced skeletal muscle ribosome biogenesis, yet attenuated mTORC1 and ribosome biogenesis-related signalling, following short-term concurrent versus single-mode resistance training
Authors: Fyfe Jackson J. , Bishop David J. , Bartlett Jonathan D. , Hanson Erik D. , Anderson Mitchell J. , Garnham Andrew P. , Stepto Nigel K. 
Published: January 2018

AbstractCombining endurance training with resistance training (RT) may attenuate skeletal muscle hypertrophic adaptation versus RT alone; however, the underlying mechanisms are unclear. We investigated changes in markers of ribosome biogenesis, a process linked with skeletal muscle hypertrophy, following concurrent training versus RT alone. Twenty-three males underwent eight weeks of RT, either performed alone (RT group,n = 8), or combined with either high-intensity interval training (HIT+RT group,n = 8), or moderate-intensity continuous training (MICT+RT group,n = 7). Muscle samples (vastus lateralis)were obtained before training, and immediately before, 1 h and 3 h after the final training session. Training-induced changes in basal expression of the 45S ribosomal RNA (rRNA) precursor (45S pre-rRNA), and 5.8S and 28S mature rRNAs, were greater with concurrent training versus RT. However, during the final training session, RT further increased both mTORC1 (p70S6K1 and rps6 phosphorylation) and 45S pre-rRNA transcription-related signalling (TIF-1A and UBF phosphorylation) versus concurrent training. These data suggest that when performed in a training-accustomed state, RT induces further increases mTORC1 and ribosome biogenesis-related signalling in human skeletal muscle versus concurrent training; however, changes in ribosome biogenesis markers were more favourable following a period of short-term concurrent training versus RT performed alone.
Bio-templated fabrication of three-dimensional network activated carbons derived from mycelium pellets for supercapacitor applications
Authors: Hao Junnan , Huang Yajing , He Chun , Xu Wenjun , Yuan Libei , Shu Dong , Song Xiaona , Meng Tao 
Published: January 2018

AbstractIn this work, a three-dimensional porous mycelium-derived activated carbon (3D-MAC) was fabricated via a facile bio-templating method using mycelium pellets as both the carbon source and the bio-template. After ZnCl2 activation and high-temperature carbonization, the specific thread-like chain structure of mycelium in the pellets can be maintained effectively. The hyphae and junctions of the cross-linking hyphae form nanowires and carbon nanoparticles that link with the neighboring nanoparticles to form a network structure. By adding NH4Cl, foreign nitrogen element doped (N-doped) 3D-MAC was obtained, which has a hierarchical porous structure composed of micropores and macropores. And the multiple pore size distribution benefits from ZnCl2 activation, the specific 3D structure and gas blowing. Meanwhile, the introduction of some hydrophilic groups and abundant N-containing functional groups in extrinsic N-doped 3D-MAC contributes to improving the Faradaic pseudocapacitance, respectively. A specific capacitance of 237.2 F g−1 at 10 mV s−1 was displayed, which is more than 1.5 times that of 3D-MAC. Even at the large scan rate of 500 mV s−1, N-doped 3D-MAC still reveals a nearly symmetric rectangular shape, demonstrating great potential as a high-performance supercapacitor electrode material due to the synergistic effects of its 3D hierarchical porous structure and various functional groups.
The Association of Fit-Fat Index with Incident Diabetes in Japanese Men: A Prospective Cohort Study
Authors: Sloan Robert A. , Sawada Susumu S. , I-Min Lee , Gando Yuko , Kawakami Ryoko , Okamoto Takashi , Tsukamoto Koji , Miyachi Motohiko 
Published: January 2018

AbstractType 2 diabetes is increasing globally and in Asia. The purpose of this study was to examine the association of a fit-fat index (FFI) with diabetes incidence among Japanese men. In total 5,014 men aged 18–64 years old, who had an annual health check up with no history of major chronic disease at baseline from 2002 to 2009 were observed. CRF was estimated via cycle ergometry. Overall, 7.6% of the men developed diabetes. The mean follow-up period was 5.3 years. Hazard ratios, 95% confidence intervals and P trend for diabetes incidence were obtained using the Cox proportional hazards model while adjusting for confounding variables. High FFI demonstrated lower risk 0.54 (0.36–0.82) compared to low BMI 0.63 (0.44–0.90), low WHtR 0.64 (0.41–1.02), and High CRF 0.72 (0.51–1.03). FFI showed a marginally stronger dose response relationship across quartiles (P (trend) =0.001) compared to BMI (P (trend) =0.002), WHtR (P (trend) =0.055), and CRF (P (trend) =0.005). Overall, both fitness and fatness play independent roles in determining diabetes incidence in Japanese men. FFI may be a more advantageous physical fitness measure because it can account for changes in fitness and/or fatness.
A Biomarker Characterizing Neurodevelopment with applications in Autism
Authors: Wu Di , José Jorge V. , Nurnberger John I. , Torres Elizabeth B. 
Published: January 2018

AbstractDespite great advances in neuroscience and genetic studies, our understanding of neurodevelopmental disorders is still quite limited. An important reason is not having objective psychiatric clinical tests. Here we propose a quantitative neurodevelopment assessment by studying natural movement outputs. Movement is central to behaviors: It involves complex coordination, temporal alterations, and precise dynamic controls. We carefully analyzed the continuous movement output data, collected with high definition electromagnetic sensors at millisecond time scales. We unraveled new metrics containing striking physiological information that was unseen neither by using traditional motion assessments nor by naked eye observations. Our putative biomarker leads to precise individualized classifications. It illustrates clear differences between Autism Spectrum Disorder (ASD) subjects from mature typical developing (TD) individuals. It provides an ASD complementary quantitative classification, which closely agrees with the clinicaly assessed functioning levels in the spectrum. It also illustrates TD potential age-related neurodevelopmental trajectories. Applying our movement biomarker to the parents of the ASD individuals studied in the cohort also shows a novel potential familial signature ASD tie. This paper proposes a putative behavioral biomarker to characterize the level of neurodevelopment with high predicting power, as illustrated in ASD subjects as an example.
Integration of GWAS, pathway and network analyses reveals novel mechanistic insights into the synthesis of milk proteins in dairy cows
Authors: Pegolo Sara , Mach Núria , Ramayo-Caldas Yuliaxis , Schiavon Stefano , Bittante Giovanni , Cecchinato Alessio 
Published: January 2018

AbstractThe quantities and proportions of protein fractions have notable effects on the nutritional and technological value of milk. Although much is known about the effects of genetic variants on milk proteins, the complex relationships among the set of genes and pathways regulating the different protein fractions synthesis and secretion into milk in dairy cows are still not completely understood. We conducted genome-wide association studies (GWAS) for milk nitrogen fractions in a cohort of 1,011 Brown Swiss cows, which uncovered 170 significant single nucleotide polymorphism (SNPs), mostly located on BTA6 and BTA11. Gene-set analysis and the network-based Associated Weight Matrix approach revealed that the milk proteins associated genes were involved in several biological functions, particularly ion and cation transmembrane transporter activity and neuronal and hormone signalling, according to the structure and function of casein micelles. Deeper analysis of the transcription factors and their predicted target genes within the network revealed thatGFI1B,ZNF407andNR5A1might act as master regulators of milk protein synthesis and secretion. The information acquired provides novel insight into the regulatory mechanisms controlling milk protein synthesis and secretion in bovine mammary gland and may be useful in breeding programmes aimed at improving milk nutritional and/or technological properties.
A Metabolomics Pilot Study on Desmoid Tumors and Novel Drug Candidates
Authors: Mercier Kelly A. , Al-Jazrawe Mushriq , Poon Raymond , Acuff Zachery , Alman Benjamin 
Published: January 2018

AbstractDesmoid tumors (aggressive fibromatosis) are locally invasive soft tissue tumors that lack the ability to metastasize. There are no directed therapies or standard treatment plan, and chemotherapeutics, radiation, and surgery often have temporary effects. The majority of desmoid tumors are related to T41A and S45F mutations of the beta-catenin encoding gene (CTNNB1). Using broad spectrum metabolomics, differences were investigated between paired normal fibroblast and desmoid tumor cells from affected patients. There were differences identified, also, in the metabolomics profiles associated with the two beta-catenin mutations, T41A and S45F. Ongoing drug screening has identified currently available compounds which inhibited desmoid tumor cellular growth by more than 50% but did not affect normal fibroblast proliferation. Two drugs were investigated in this study, and Dasatinib and FAK Inhibitor 14 treatments resulted in unique metabolomics profiles for the normal fibroblast and desmoid tumor cells, in addition to the T41A and S45F. The biochemical pathways that differentiated the cell lines were aminoacyl-tRNA biosynthesis in mitochondria and cytoplasm and signal transduction amino acid-dependent mTORC1 activation. This study provides preliminary understanding of the metabolic differences of paired normal and desmoid tumors cells, their response to desmoid tumor therapeutics, and new pathways to target for therapy.
Non-estrogenic Xanthohumol Derivatives Mitigate Insulin Resistance and Cognitive Impairment in High-Fat Diet-induced Obese Mice
Authors: Miranda Cristobal L. , Johnson Lance A. , de Montgolfier Oriane , Elias Valerie D. , Ullrich Lea S. , Hay Joshua J. , Paraiso Ines L. , Choi Jaewoo , Reed Ralph L. , Revel Johana S. , Kioussi Chrissa , Bobe Gerd , Iwaniec Urszula T. , Turner Russell T. , Katzenellenbogen Benita S. , Katzenellenbogen John A. , Blakemore Paul R. , Gombart Adrian F. , Maier Claudia S. , Raber Jacob , Stevens Jan F. 
Published: January 2018

AbstractXanthohumol (XN), a prenylated flavonoid from hops, improves dysfunctional glucose and lipid metabolism in animal models of metabolic syndrome (MetS). However, its metabolic transformation into the estrogenic metabolite, 8-prenylnaringenin (8-PN), poses a potential health concern for its use in humans. To address this concern, we evaluated two hydrogenated derivatives, α,β-dihydro-XN (DXN) and tetrahydro-XN (TXN), which showed negligible affinity for estrogen receptors α and β, and which cannot be metabolically converted into 8-PN. We compared their effects to those of XN by feeding C57BL/6J mice a high-fat diet (HFD) containing XN, DXN, or TXN for 13 weeks. DXN and TXN were present at higher concentrations than XN in plasma, liver and muscle. Mice administered XN, DXN or TXN showed improvements of impaired glucose tolerance compared to the controls. DXN and TXN treatment resulted in a decrease of HOMA-IR and plasma leptin. C2C12 embryonic muscle cells treated with DXN or TXN exhibited higher rates of uncoupled mitochondrial respiration compared to XN and the control. Finally, XN, DXN, or TXN treatment ameliorated HFD-induced deficits in spatial learning and memory. Taken together, DXN and TXN could ameliorate the neurocognitive-metabolic impairments associated with HFD-induced obesity without risk of liver injury and adverse estrogenic effects.
Insulin Resistance is Associated with Cognitive Decline Among Older Koreans with Normal Baseline Cognitive Function: A Prospective Community-Based Cohort Study
Authors: Kong Sung Hye , Park Young Joo , Lee Jun-Young , Cho Nam H. , Moon Min Kyong 
Published: January 2018

AbstractWe evaluated whether metabolic factors were associated with cognitive decline, compared to baseline cognitive function, among geriatric population. The present study evaluated data from an ongoing prospective community-based Korean cohort study. Among 1,387 participants who were >65 years old, 422 participants were evaluated using the Korean mini-mental status examination (K-MMSE) at the baseline and follow-up examinations. The mean age at the baseline was 69.3 ± 2.9 years, and 222 participants (52.6%) were men. The mean duration of education was 7.1 ± 3.6 years. During a mean follow-up of 5.9 ± 0.1 years, the K-MMSE score significantly decreased (−1.1 ± 2.7 scores), although no significant change was observed in the homeostasis model assessment of insulin resistance (HOMA-IR) value. Participants with more decreased percent changes in K-MMSE scores had a shorter duration of education (p = 0.001), older age (p = 0.022), higher baseline K-MMSE score (p < 0.001), and increased insulin resistance (∆HOMA-IR, p = 0.002). The correlation between the percent changes in K-MMSE and ∆HOMA-IR values remained significant after multivariable adjustment (B = −0.201, p = 0.002). During a 6-year follow-up of older Koreans with normal baseline cognitive function, increased insulin resistance was significantly correlated with decreased cognitive function.
Layer number identification of CVD-grown multilayer graphene using Si peak analysis
Authors: No You-Shin , Choi Hong Kyw , Kim Jin-Soo , Kim Hakseong , Yu Young-Jun , Choi Choon-Gi , Choi Jin Sik 
Published: January 2018

AbstractSince the successful exfoliation of graphene, various methodologies have been developed to identify the number of layers of exfoliated graphene. The optical contrast, Raman G-peak intensity, and 2D-peak line-shape are currently widely used as the first level of inspection for graphene samples. Although the combination analysis of G- and 2D-peaks is powerful for exfoliated graphene samples, its use is limited in chemical vapor deposition (CVD)-grown graphene because CVD-grown graphene consists of various domains with randomly rotated crystallographic axes between layers, which makes the G- and 2D-peaks analysis difficult for use in number identification. We report herein that the Raman Si-peak intensity can be a universal measure for the number identification of multilayered graphene. We synthesized a few-layered graphene via the CVD method and performed Raman spectroscopy. Moreover, we measured the Si-peak intensities from various individual graphene domains and correlated them with the corresponding layer numbers. We then compared the normalized Si-peak intensity of the CVD-grown multilayer graphene with the exfoliated multilayer graphene as a reference and successfully identified the layer number of the CVD-grown graphene. We believe that this Si-peak analysis can be further applied to various 2-dimensional (2D) materials prepared by both exfoliation and chemical growth.
Lithium chloride effectively kills the honey bee parasite Varroa destructor by a systemic mode of action
Authors: Ziegelmann Bettina , Abele Elisabeth , Hannus Stefan , Beitzinger Michaela , Berg Stefan , Rosenkranz Peter 
Published: January 2018

AbstractHoney bees are increasingly important in the pollination of crops and wild plants. Recent reports of the weakening and periodical high losses of managed honey bee colonies have alarmed beekeeper, farmers and scientists. Infestations with the ectoparasitic mite Varroa destructor in combination with its associated viruses have been identified as a crucial driver of these health problems. Although yearly treatments are required to prevent collapses of honey bee colonies, the number of effective acaricides is small and no new active compounds have been registered in the past 25 years. RNAi-based methods were proposed recently as a promising new tool. However, the application of these methods according to published protocols has led to a surprising discovery. Here, we show that the lithium chloride that was used to precipitate RNA and other lithium compounds is highly effective at killing Varroa mites when fed to host bees at low millimolar concentrations. Experiments with caged bees and brood-free artificial swarms consisting of a queen and several thousand bees clearly demonstrate the potential of lithium as miticidal agent with good tolerability in worker bees providing a promising basis for the development of an effective and easy-to-apply control method for mite treatment.
Cecal Volvulus following a Right Nephrectomy for Wilms' Tumor: Should We Need to Close the Lateral Peritoneum?
Authors: Gonzalez-Urquijo Mauricio , Ovalle-Chao Christian , Flores-Villalba Eduardo , de Jesus Garza-Luna Ulises , Velazco-De La Garza Jose , Garza-Serna Ulises 
Published: January 2018

AbstractWilms' tumor (WT) accounts for 90% of all pediatric renal malignant tumors. The most common postoperative complication based on the National Wilms' Tumor Study is small bowel obstruction. We report on a 2-year-old girl with postoperative bowel obstruction following a right nephrectomy for WT. The patient was reintervened 48 hours after surgery and a cecal volvulus was found. Here, we will describe possible causes of this postoperative complication and discuss management.
Direct Oral Anticoagulants for Pulmonary Embolism: Importance of Anatomical Extent
Authors: Brekelmans Marjolein , Büller Harry , Mercuri Michele , Ageno Walter , Chen Cathy , Cohen Alexander , van Es Nick , Grosso Michael , Medina Andria , Raskob Gary , Segers Annelise , Vanassche Thomas , Verhamme Peter , Wells Philip , Zhang George , Weitz Jeffrey 
Published: January 2018

AbstractPulmonary embolism (PE) studies used direct oral anticoagulants (DOACs) with or without initial heparin. We aimed to (1) evaluate if PE patients benefit from initial heparin; (2) describe patient characteristics in the DOAC studies; and (3) investigate whether the anatomical extent of PE correlates with N-terminal pro-brain natriuretic peptide (NT-proBNP) levels, cause of PE, and recurrence rate. Our methods were (1) an indirect meta-analysis comparing the recurrence risk in DOAC-treated patients with or without initial heparin to those patients given heparin/vitamin K antagonist (VKA). (2) To compare the PE studies, information was extracted on baseline characteristics including anatomical extent. (3) The Hokusai-VTE study was used to correlate anatomical extent of PE with NT-proBNP levels, causes of PE, and recurrent venous thromboembolism (VTE). The meta-analysis included 11,539 PE patients. The relative risk of recurrent VTE with DOACs versus heparin/VKAs was 0.8 (95% confidence interval [CI]: 0.6–1.1) with heparin lead-in and 1.1 (95% CI: 0.8–1.5) without heparin. In the DOAC studies, the proportion of patients with extensive PE varied from 24 to 47%. In Hokusai-VTE, NT-proBNP was elevated in 4% of patients with limited and in over 60% of patients with extensive disease. Cause of PE and anatomical extent were not related. Recurrence rates increased from 1.6% with limited to 3.2% with extensive disease in heparin/edoxaban-treated patients, and from 2.4 to 3.9% in heparin/warfarin recipients. In conclusion, indirect evidence suggests a heparin lead-in before DOACs may be advantageous in PE. Anatomical extent was related to elevated NT-proBNP and outcome, but not to PE cause.