bluuebunny/crossref_metadata_2025_split huggingface dataset:
Structure-based drug design targeting the cell membrane receptor GPBAR1: exploiting the bile acid scaffold towards selective agonism
Authors: Di Leva Francesco Saverio , Festa Carmen , Renga Barbara , Sepe Valentina , Novellino Ettore , Fiorucci Stefano , Zampella Angela , Limongelli Vittorio 
Published: November 2015

AbstractBile acids can regulate nutrient metabolism through the activation of the cell membrane receptor GPBAR1 and the nuclear receptor FXR. Developing an exogenous control over these receptors represents an attractive strategy for the treatment of enterohepatic and metabolic disorders. A number of dual GPBAR1/FXR agonists are known, however their therapeutic use is limited by multiple unwanted effects due to activation of the diverse downstream signals controlled by the two receptors. On the other hand, designing selective GPBAR1 and FXR agonists is challenging since the two proteins share similar structural requisites for ligand binding. Here, taking advantage of our knowledge of the two targets, we have identified through a rational drug design study a series of amine lithocholic acid derivatives as selective GPBAR1 agonists. The presence of the 3α-NH2 group on the steroidal scaffold is responsible for the selectivity over FXR unveiling unprecedented structural insights into bile acid receptors activity modulation.
Triggering of high-speed neurite outgrowth using an optical microheater
Authors: Oyama Kotaro , Zeeb Vadim , Kawamura Yuki , Arai Tomomi , Gotoh Mizuho , Itoh Hideki , Itabashi Takeshi , Suzuki Madoka , Ishiwata Shin’ichi 
Published: November 2015

AbstractOptical microheating is a powerful non-invasive method for manipulating biological functions such as gene expression, muscle contraction and cell excitation. Here, we demonstrate its potential usage for regulating neurite outgrowth. We found that optical microheating with a water-absorbable 1,455-nm laser beam triggers directional and explosive neurite outgrowth and branching in rat hippocampal neurons. The focused laser beam under a microscope rapidly increases the local temperature from 36 °C to 41 °C (stabilized within 2 s), resulting in the elongation of neurites by more than 10 μm within 1 min. This high-speed, persistent elongation of neurites was suppressed by inhibitors of both microtubule and actin polymerization, indicating that the thermosensitive dynamics of these cytoskeletons play crucial roles in this heat-induced neurite outgrowth. Furthermore, we showed that microheating induced the regrowth of injured neurites and the interconnection of neurites. These results demonstrate the efficacy of optical microheating methods for the construction of arbitrary neural networks.
Nanostructures of Indium Gallium Nitride Crystals Grown on Carbon Nanotubes
Authors: Park Ji-Yeon , Man Song Keun , Min Yo-Sep , Choi Chel-Jong , Seok Kim Yoon , Lee Sung-Nam 
Published: November 2015

AbstractNanostructure (NS) InGaN crystals were grown on carbon nanotubes (CNTs) using metalorganic chemical vapor deposition. The NS-InGaN crystals, grown on a ~5-μm-long CNT/Si template, were estimated to be ~100–270 nm in size. Transmission electron microscope examinations revealed that single-crystalline InGaN NSs were formed with different crystal facets. The observed green (~500 nm) cathodoluminescence (CL) emission was consistent with the surface image of the NS-InGaN crystallites, indicating excellent optical properties of the InGaN NSs on CNTs. Moreover, the CL spectrum of InGaN NSs showed a broad emission band from 490 to 600 nm. Based on these results, we believe that InGaN NSs grown on CNTs could aid in overcoming the green gap in LED technologies.
High-power graphene mode-locked Tm/Ho co-doped fiber laser with evanescent field interaction
Authors: Li Xiaohui , Yu Xuechao , Sun Zhipei , Yan Zhiyu , Sun Biao , Cheng Yuanbing , Yu Xia , Zhang Ying , Wang Qi Jie 
Published: November 2015

AbstractMid-infrared ultrafast fiber lasers are valuable for various applications, including chemical and biomedical sensing, material processing and military applications. Here, we report all-fiber high-power graphene mode-locked Tm/Ho co-doped fiber laser at long wavelength with evanescent field interaction. Ultrafast pulses up to 7.8 MHz are generated at a center wavelength of 1879.4 nm, with a pulse width of 4.7 ps. A graphene absorber integrated with a side-polished fiber can increase the damage threshold significantly. Harmonics mode-locking can be obtained till to the 21th harmonics at a pump power of above 500 mW. By using one stage amplifier in the anomalous dispersion regime, the laser can be amplified up to 450 mW and the narrowest pulse duration of 1.4 ps can be obtained simultaneously. Our work paves the way to graphene Tm/Ho co-doped mode-locked all-fiber master oscillator power amplifiers as potentially efficient and economic laser sources for high-power laser applications, such as special material processing and nonlinear optical studies.
The coastal ocean response to the global warming acceleration and hiatus
Authors: Liao Enhui , Lu Wenfang , Yan Xiao-Hai , Jiang Yuwu , Kidwell Autumn 
Published: November 2015

AbstractCoastlines are fundamental to humans for habitation, commerce and natural resources. Many coastal ecosystem disasters, caused by extreme sea surface temperature (SST), were reported when the global climate shifted from global warming to global surface warming hiatus after 1998. The task of understanding the coastal SST variations within the global context is an urgent matter. Our study on the global coastal SST from 1982 to 2013 revealed a significant cooling trend in the low and mid latitudes (31.4% of the global coastlines) after 1998, while 17.9% of the global coastlines changed from a cooling trend to a warming trend concurrently. The trend reversals in the Northern Pacific and Atlantic coincided with the phase shift of Pacific Decadal Oscillation and North Atlantic Oscillation, respectively. These coastal SST changes are larger than the changes of the global mean and open ocean, resulting in a fast increase of extremely hot/cold days and thus extremely hot/cold events. Meanwhile, a continuous increase of SST was detected for a considerable portion of coastlines (46.7%) with a strengthened warming along the coastlines in the high northern latitudes. This suggests the warming still continued and strengthened in some regions after 1998, but with a weaker pattern in the low and mid latitudes.
Rapid and robust spatiotemporal dynamics of the first-order phase transition in crystals of the organic-inorganic perovskite (C12H25NH3)2PbI4
Authors: Yangui Aymen , Sy Mouhamadou , Li Liang , Abid Younes , Naumov Panče , Boukheddaden Kamel 
Published: November 2015

AbstractThe dynamics of the thermally induced first-order structural phase transition in a high-quality single crystal of the organic-inorganic perovskite (C12H25NH3)2PbI4 was investigated by optical microscopy. The propagation of the straight phase front (habit plane) during the phase transition along the cooling and heating pathways of the thermal hysteresis was observed. The thermochromic character of the transition allowed monitoring of the thermal dependence of average optical density and aided the visualization of the interface propagation. The thermal hysteresis loop is 10 K wide and the interface velocity is constant at V ≈ 1.6 mm s–1. The transition is accompanied with sizeable change in crystal size, with elongation of ~6% along the b axis and compression of ~ –2% along the a axis, in excellent agreement with previously reported X-ray diffraction data. The progression of the habit plane is at least 160 times faster than in spin-crossover materials and opens new prospects for organic-inorganic perovskites as solid switching materials. Moreover, the crystals of (C12H25NH3)2PbI4 are unusually mechanically robust and present excellent resilience to thermal cycling. These hitherto unrecognized properties turn this and possibly similar hybrid perovskites into perspective candidates as active medium for microscopic actuation.
Prevalence and molecular characterizations of enterovirus D68 among children with acute respiratory infection in China between 2012 and 2014
Authors: Xiao Qiuyan , Ren Luo , Zheng Shouyan , Wang Lili , Xie Xiaohong , Deng Yu , Zhao Yao , Zhao Xiaodong , Luo Zhengxiu , Fu Zhou , Huang Ailong , Liu Enmei 
Published: November 2015

AbstractEV-D68 is associated with respiratory tract infections (RTIs). Since its first isolation, EV-D68 has been detected sporadically. However, the US and Canada have experienced outbreaks of EV-D68 infections between August and December 2014. This study aimed to investigate the molecular epidemiology and clinical characteristics of EV-D68 in Chongqing, Southwestern China. From January 2012 to November 2014, 1876 nasopharyngeal aspirate specimens (NPAs) were collected from hospitalized children with RTIs. Among the 1876 NPAs, EV-D68 was detected in 19 samples (1.0%, 19/1876). Of these, 13 samples were detected in September and October 2014 (9.8%, 13/132). Phylogenetic analysis showed that all 13 strains detected in the 2014 Chongqing had high homology with the main strains of the 2014 US outbreak. Among the children with EV-D68 infection, 13 (68%) had a history of recurrent wheezing. A total of 13 children had a discharge diagnosis of asthma. Of these, 11 children were diagnosed with acute asthma exacerbation. EV-D68 was the predominant pathogen that evoked asthma exacerbation in September and October 2014. In conclusion, our results found that a history of recurrent wheezing may be a risk factor for the detection of EV-D68 and viral-induced asthma exacerbation may be a clinical feature of EV-D68 infection.
Impacts of the ENSO Modoki and other Tropical Indo-Pacific Climate-Drivers on African Rainfall
Authors: Preethi B. , Sabin T. P. , Adedoyin J. A. , Ashok K. 
Published: November 2015

AbstractThe study diagnoses the relative impacts of the four known tropical Indo-Pacific drivers, namely, El Niño Southern Oscillation (ENSO), ENSO Modoki, Indian Ocean Dipole (IOD) and Indian Ocean Basin-wide mode (IOBM) on African seasonal rainfall variability. The canonical El Niño and El Niño Modoki are in general associated with anomalous reduction (enhancement) of rainfall in southern (northern) hemispheric regions during March-May season. However, both the El Niño flavours anomalously reduce the northern hemispheric rainfall during June-September. Interestingly, during boreal spring and summer, in many regions, the Indian Ocean drivers have influences opposite to those from tropical Pacific drivers. On the other hand, during the October-December season, the canonical El Niño and/or positive IOD are associated with an anomalous enhancement of rainfall in the Eastern Africa, while the El Niño Modoki events are associated with an opposite impact. In addition to the Walker circulation changes, the Indo-Pacific drivers influence the African rainfall through modulating jet streams. During boreal summer, the El Niño Modoki and canonical El Niño (positive IOD) tend to weaken (strengthen) the tropical easterly jet and result in strengthening (weakening) and southward shift of African easterly jet. This anomalously reduces (enhances) rainfall in the tropical north, including Sahelian Africa.
Heat Transport Compensation in Atmosphere and Ocean over the Past 22,000 Years
Authors: Yang Haijun , Zhao Yingying , Liu Zhengyu , Li Qing , He Feng , Zhang Qiong 
Published: November 2015

AbstractThe Earth’s climate has experienced dramatic changes over the past 22,000 years; however, the total meridional heat transport (MHT) of the climate system remains stable. A 22,000-year-long simulation using an ocean-atmosphere coupled model shows that the changes in atmosphere and ocean MHT are significant but tend to be out of phase in most regions, mitigating the total MHT change, which helps to maintain the stability of the Earth’s overall climate. A simple conceptual model is used to understand the compensation mechanism. The simple model can reproduce qualitatively the evolution and compensation features of the MHT over the past 22,000 years. We find that the global energy conservation requires the compensation changes in the atmosphere and ocean heat transports. The degree of compensation is mainly determined by the local climate feedback between surface temperature and net radiation flux at the top of the atmosphere. This study suggests that an internal mechanism may exist in the climate system, which might have played a role in constraining the global climate change over the past 22,000 years.
Human proximal tubule epithelial cells cultured on hollow fibers: living membranes that actively transport organic cations
Authors: Jansen J. , De Napoli I. E , Fedecostante M. , Schophuizen C. M. S. , Chevtchik N. V. , Wilmer M. J. , van Asbeck A. H. , Croes H. J. , Pertijs J. C. , Wetzels J. F. M. , Hilbrands L. B. , van den Heuvel L. P. , Hoenderop J. G. , Stamatialis D. , Masereeuw R. 
Published: November 2015

AbstractThe bioartificial kidney (BAK) aims at improving dialysis by developing ‘living membranes’ for cells-aided removal of uremic metabolites. Here, unique human conditionally immortalized proximal tubule epithelial cell (ciPTEC) monolayers were cultured on biofunctionalized MicroPES (polyethersulfone) hollow fiber membranes (HFM) and functionally tested using microfluidics. Tight monolayer formation was demonstrated by abundant zonula occludens-1 (ZO-1) protein expression along the tight junctions of matured ciPTEC on HFM. A clear barrier function of the monolayer was confirmed by limited diffusion of FITC-inulin. The activity of the organic cation transporter 2 (OCT2) in ciPTEC was evaluated in real-time using a perfusion system by confocal microscopy using 4-(4-(dimethylamino)styryl)-N-methylpyridinium iodide (ASP+) as a fluorescent substrate. Initial ASP+ uptake was inhibited by a cationic uremic metabolites mixture and by the histamine H2-receptor antagonist, cimetidine. In conclusion, a ‘living membrane’ of renal epithelial cells on MicroPES HFM with demonstrated active organic cation transport was successfully established as a first step in BAK engineering.
Hybrid Toffoli gate on photons and quantum spins
Authors: Luo Ming-Xing , Ma Song-Ya , Chen Xiu-Bo , Wang Xiaojun 
Published: November 2015

AbstractQuantum computation offers potential advantages in solving a number of interesting and difficult problems. Several controlled logic gates, the elemental building blocks of quantum computer, have been realized with various physical systems. A general technique was recently proposed that significantly reduces the realization complexity of multiple-control logic gates by harnessing multi-level information carriers. We present implementations of a key quantum circuit: the three-qubit Toffoli gate. By exploring the optical selection rules of one-sided optical microcavities, a Toffoli gate may be realized on all combinations of photon and quantum spins in the QD-cavity. The three general controlled-NOT gates are involved using an auxiliary photon with two degrees of freedom. Our results show that photons and quantum spins may be used alternatively in quantum information processing.
Plasmon-Enhanced Surface Photovoltage of ZnO/Ag Nanogratings
Authors: Gwon Minji , Sohn Ahrum , Cho Yunae , Phark Soo-Hyon , Ko Jieun , Sang Kim Youn , Kim Dong-Wook 
Published: November 2015

AbstractWe investigated the surface photovoltage (SPV) behaviors of ZnO/Ag one-dimensional (1D) nanogratings using Kelvin probe force microscopy (KPFM). The grating structure could couple surface plasmon polaritons (SPPs) with photons, giving rise to strong light confinement at the ZnO/Ag interface. The larger field produced more photo-excited carriers and increased the SPV. SPP excitation influenced the spatial distribution of the photo-excited carriers and their recombination processes. As a result, the SPV relaxation time clearly depended on the wavelength and polarization of the incident light. All of these results suggested that SPV measurement using KPFM should be very useful for studying the plasmonic effects in nanoscale metal/semiconductor hybrid structures.
miR-34a screened by miRNA profiling negatively regulates Wnt/β-catenin signaling pathway in Aflatoxin B1 induced hepatotoxicity
Authors: Zhu Liye , Gao Jing , Huang Kunlun , Luo Yunbo , Zhang Boyang , Xu Wentao 
Published: November 2015

AbstractAflatoxin-B1 (AFB1), a hepatocarcinogenic mycotoxin, was demonstrated to induce the high rate of hepatocellular carcinoma (HCC). MicroRNAs (miRNAs) participate in the regulation of several biological processes in HCC. However, the function of miRNAs in AFB1-induced HCC has received a little attention. Here, we applied Illumina deep sequencing technology for high-throughout profiling of microRNAs in HepG2 cells lines after treatment with AFB1. Analysis of the differential expression profile of miRNAs in two libraries, we identified 9 known miRNAs and 1 novel miRNA which exhibited abnormal expression. KEGG analysis indicated that predicted target genes of differentially expressed miRNAs are involved in cancer-related pathways. Down-regulated of Drosha, DGCR8 and Dicer 1 indicated an impairment of miRNA biogenesis in response to AFB1. miR-34a was up-regulated significantly, down-regulating the expression of Wnt/β-catenin signaling pathway by target gene β-catenin. Anti-miR-34a can significantly relieved the down-regulated β-catenin and its downstream genes, c-myc and Cyclin D1 and the S-phase arrest in cell cycle induced by AFB1 can also be relieved. These results suggested that AFB1 might down-regulate Wnt/β-catenin signaling pathway in HepG2 cells by up-regulating miR-34a, which may involve in the mechanism of liver tumorigenesis.
Boron nitride encapsulated copper nanoparticles: a facile one-step synthesis and their effect on thermal decomposition of ammonium perchlorate
Authors: Huang Caijin , liu Qiuwen , Fan Wenjie , Qiu Xiaoqing 
Published: November 2015

AbstractReactivity is of great importance for metal nanoparticles used as catalysts, biomaterials and advanced sensors, but seeking for high reactivity seems to be conflict with high chemical stability required for metal nanoparticles. There is a subtle balance between reactivity and stability. This could be reached for colloidal metal nanoparticles using organic capping reagents, whereas it is challenging for powder metal nanoparticles. Here, we developed an alternative approach to encapsulate copper nanoparticles with a chemical inertness material—hexagonal boron nitride. The wrapped copper nanoparticles not only exhibit high oxidation resistance under air atmosphere, but also keep excellent promoting effect on thermal decomposition of ammonium perchlorate. This approach opens the way to design metal nanoparticles with both high stability and reactivity for nanocatalysts and their technological application.
Optical coherence tomography-guided laser microsurgery for blood coagulation with continuous-wave laser diode
Authors: Chang Feng-Yu , Tsai Meng-Tsan , Wang Zu-Yi , Chi Chun-Kai , Lee Cheng-Kuang , Yang Chih-Hsun , Chan Ming-Che , Lee Ya-Ju 
Published: November 2015

AbstractBlood coagulation is the clotting and subsequent dissolution of the clot following repair to the damaged tissue. However, inducing blood coagulation is difficult for some patients with homeostasis dysfunction or during surgery. In this study, we proposed a method to develop an integrated system that combines optical coherence tomography (OCT) and laser microsurgery for blood coagulation. Also, an algorithm for positioning of the treatment location from OCT images was developed. With OCT scanning, 2D/3D OCT images and angiography of tissue can be obtained simultaneously, enabling to noninvasively reconstruct the morphological and microvascular structures for real-time monitoring of changes in biological tissues during laser microsurgery. Instead of high-cost pulsed lasers, continuous-wave laser diodes (CW-LDs) with the central wavelengths of 450 nm and 532 nm are used for blood coagulation, corresponding to higher absorption coefficients of oxyhemoglobin and deoxyhemoglobin. Experimental results showed that the location of laser exposure can be accurately controlled with the proposed approach of imaging-based feedback positioning. Moreover, blood coagulation can be efficiently induced by CW-LDs and the coagulation process can be monitored in real-time with OCT. This technology enables to potentially provide accurate positioning for laser microsurgery and control the laser exposure to avoid extra damage by real-time OCT imaging.
High-efficiency exfoliation of layered materials into 2D nanosheets in switchable CO2/Surfactant/H2O system
Authors: Wang Nan , Xu Qun , Xu Shanshan , Qi Yuhang , Chen Meng , Li Hongxiang , Han Buxing 
Published: November 2015

AbstractLayered materials present attractive and important properties due to their two-dimensional (2D) structure, allowing potential applications including electronics, optoelectronics and catalysis. However, fully exploiting the outstanding properties will require a method for their efficient exfoliation. Here we present that a series of layered materials can be successfully exfoliated into single- and few-layer nanosheets using the driving forces coming from the phase inversion, i.e., from micelles to reverse micelles in the emulsion microenvironment built by supercritical carbon dioxide (SC CO2). The effect of variable experimental parameters including CO2 pressure, ethanol/water ratio and initial concentration of bulk materials on the exfoliation yield have been investigated. Moreover, we demonstrate that the exfoliated 2D nanosheets have their worthwhile applications, for example, graphene can be used to prepare conductive paper, MoS2 can be used as fluorescent label to perform cellular labelling and BN can effectively reinforce polymers leading to the promising mechanical properties.
Screening and Evaluation of Hepatitis C Virus Infection in Pregnant Women on Opioid Maintenance Therapy: A Retrospective Cohort Study
Authors: Krans Elizabeth E. , Zickmund Susan L. , Rustgi Vinod K. , Park Seo Young , Dunn Shannon L. , Schwarz Eleanor B. 
Published: November 2015

Background The purpose of this study was to describe the delivery of prenatal care services to women with opioid use disorder (OUD) on opioid maintenance therapy at high risk for hepatitis C virus (HCV) infection. Methods We conducted a retrospective cohort evaluation of 791 pregnant women with OUD from 2009 to 2012. HCV screening was defined as documentation of (a) an anti-HCV antibody test or (b) a provider discussion regarding a known HCV diagnosis during pregnancy. Multivariate logistic regression was used to identify predictors of HCV screening during pregnancy. Results Among 791 pregnant women with OUD, 611 (77.2%) were screened for HCV infection and 369/611 (60.4%) were HCV positive. In multivariable analysis, patients who were married (odds ratio [OR] = 0.52; 95% confidence interval [CI] = 0.29, 0.91), used buprenorphine (OR = 0.45; 95% CI = 0.28, 0.71), and were cared for by private practice providers (OR = 0.29; 95% CI = 0.19, 0.45) were significantly less likely to be screened. In contrast, patients who used benzodiazepines (OR = 1.72; 95% CI = 1.02, 2.92), intravenous (IV) opioids (OR = 6.15; 95% CI = 3.96, 9.56), had legal problems (OR = 2.23; 95% CI = 1.12, 4.45), had children not in their custody (OR = 1.81; 95% CI = 1.01, 3.24), and who had a partner with substance abuse history (OR = 2.38; 95% CI = 1.23, 4.59) were significantly more likely to be screened. Of 369 HCV-positive patients, a new diagnosis of HCV was made during pregnancy for 108 (29.3%) patients. Only 94 (25.5%) had HCV viral load testing, 61 (16.5%) had HCV genotype testing, and 38 (10.4%) received an immunization for hepatitis A. Although 285 (77.2%) patients were referred to hepatology, only 71 (24.9%) attended the consultation. Finally, only 6 (1.6%) patients received HCV treatment 1 year following delivery. Conclusions Prenatal care approaches to HCV infection remain inconsistent, and the majority of patients diagnosed with HCV infection during pregnancy do not receive treatment after delivery.