bluuebunny/crossref_metadata_2025_split huggingface dataset:
Experiments support an improved model for particle transport in fluidized beds
Authors: Zhang Huili , Kong Weibin , Tan Tianwei , Gilles Flamant , Baeyens Jan 
Published: August 2017

AbstractThe upwards flow of particles in an Upflow Bubbling Fluidized Bed (UBFB) is studied experimentally and modelled from pressure drop considerations and energy loss equations. For Geldart group A powders tested, the upward solid flux, G
s
, in the tube can be expressed in terms of the applied superficial gas velocity, the free fall (terminal) velocity of the particles during their hindered settling, KU
t
, the pressure exerted at the base of the conveyor tube, and the tube length. The model expression $${{\boldsymbol{G}}}_{{\boldsymbol{s}}}=\frac{{\boldsymbol{\Delta }}{\boldsymbol{P}}}{({U}_{{\boldsymbol{g}}}-{\boldsymbol{K}}{{\boldsymbol{U}}}_{{\boldsymbol{t}}}){\boldsymbol{+}}\frac{{{\boldsymbol{K}}}^{{\boldsymbol{2}}}{\boldsymbol{g}}{\boldsymbol{L}}}{({{\boldsymbol{U}}}_{{\boldsymbol{g}}}-{\boldsymbol{K}}{{\boldsymbol{U}}}_{{\boldsymbol{t}}})}}$$

G

s

=

Δ
P

(

U

g

−
K

U

t

)

+

K

2

g
L

(

U

g

−
K

U

t

)

can be used for design purposes, with K, the correction factor for hindered settling of the particles, approximately equal to 0.1 at high G
s
-values, but a function of the solids fraction in the upward conveying. The energy efficiency of the system increases with increasing U and Gs. The model equation was tentatively applied to predict the effects of particle size, tube length and operation in Circulating Fluidized Bed mode. It is demonstrated that the UBFB is an efficient and flexible way of transporting particles upwards, with limited particle attrition or tube erosion due to the low gas velocity applied.
Genome-wide identification and characterization of TCP transcription factor genes in upland cotton (Gossypium hirsutum)
Authors: Li Wen , Li Deng-Di , Han Li-Hong , Tao Miao , Hu Qian-Qian , Wu Wen-Ying , Zhang Jing-Bo , Li Xue-Bao , Huang Geng-Qing 
Published: August 2017

AbstractTCP proteins are plant-specific transcription factors (TFs), and perform a variety of physiological functions in plant growth and development. In this study, 74 non-redundant TCP genes were identified in upland cotton (Gossypium hirsutum L.) genome. Cotton TCP family can be classified into two classes (class I and class II) that can be further divided into 11 types (groups) based on their motif composition. Quantitative RT-PCR analysis indicated that GhTCPs display different expression patterns in cotton tissues. The majority of these genes are preferentially or specifically expressed in cotton leaves, while some GhTCP genes are highly expressed in initiating fibers and/or elongating fibers of cotton. Yeast two-hybrid results indicated that GhTCPs can interact with each other to form homodimers or heterodimers. In addition, GhTCP14a and GhTCP22 can interact with some transcription factors which are involved in fiber development. These results lay solid foundation for further study on the functions of TCP genes during cotton fiber development.
Antagonistic interaction between jasmonic acid and cytokinin in xylem development
Authors: Jang Geupil , Chang Sun Hyun , Um Tae Young , Lee Sangyool , Kim Ju-Kon , Choi Yang Do 
Published: August 2017

AbstractDevelopmental flexibility under stress conditions largely relies on the interactions between hormones that mediate stress responses and developmental processes. In this study, we showed that the stress hormone jasmonic acid (JA) induces formation of extra xylem in the roots of wild-type Arabidopsis thaliana (Col-0). JA signaling mutants such as coronatine insensitive1-1 and jasmonate resistant1-1 did not form extra xylem in response to JA, but the JA biosynthesis mutant oxophytodienoate-reductase3 did form extra xylem. These observations suggested that the JA response promotes xylem development. To understand the mechanism, we examined the regulatory interaction between JA and cytokinin, a negative regulator of xylem development. JA treatment reduced cytokinin responses in the vasculature, and exogenous cytokinin nullified the effect of JA on formation of extra xylem. A time-course experiment showed that suppression of cytokinin responses by JA does not occur rapidly, but the JA-mediated xylem phenotype is tightly linked to the suppression of the cytokinin response. Further analysis of arabidopsis histidine phosphotransfer protein6-1 and myc2-3 mutants revealed that the JA-responsive transcription factor MYC2 regulates the expression of AHP6 in response to JA and expression of AHP6 is involved in the JA-mediated xylem phenotype.
An intra-population analysis of the indris’ song dissimilarity in the light of genetic distance
Authors: Torti Valeria , Bonadonna Giovanna , De Gregorio Chiara , Valente Daria , Randrianarison Rose Marie , Friard Olivier , Pozzi Luca , Gamba Marco , Giacoma Cristina 
Published: August 2017

AbstractThe increasing interest in the evolution of human language has led several fields of research to focus on primate vocal communication. The ‘singing primates’, which produce elaborated and complex sequences of vocalizations, are of particular interest for this topic. Indris (Indri indri) are the only singing lemurs and emit songs whose most distinctive portions are “descending phrases” consisting of 2-5 units. We examined how the structure of the indris’ phrases varied with genetic relatedness among individuals. We tested whether the acoustic structure could provide conspecifics with information about individual identity and group membership. When analyzing phrase dissimilarity and genetic distance of both sexes, we found significant results for males but not for females. We found that similarity of male song-phrases correlates with kin in both time and frequency parameters, while, for females, this information is encoded only in the frequency of a single type. Song phrases have consistent individual-specific features, but we did not find any potential for advertising group membership. We emphasize the fact that genetic and social factors may play a role in the acoustic plasticity of female indris. Altogether, these findings open a new perspective for future research on the possibility of vocal production learning in these primates.
The Molecular Dynamics Study of Vacancy Formation During Solidification of Pure Metals
Authors: Zhang H. Y. , Liu F. , Yang Y. , Sun D. Y. 
Published: August 2017

AbstractIn order to understand the defect trapping during solidification in pure elements, we have performed molecular dynamics simulations on both aluminum and nickel. We find that vacancies are the dominant defects in the product crystals for both metals. For slight undercooling, the vacancy concentration strongly depends on the growth velocity, rather than the growth orientations, and there is an approximately linear relationship between the growth velocity and vacancy concentration. However, for deep undercooling, the vacancy concentration shows a remarkable anisotropy between (100) and (110) orientations. Based on the competition between atomic diffusion and growth, a possible mechanism for vacancy trapping is suggested.
Heterologous expression of the N-acetylglucosaminyltransferase I dictates a reinvestigation of the N-glycosylation pathway in Chlamydomonas reinhardtii
Authors: Vanier Gaëtan , Lucas Pierre-Louis , Loutelier-Bourhis Corinne , Vanier Jessica , Plasson Carole , Walet-Balieu Marie-Laure , Tchi-Song Philippe Chan , Remy-Jouet Isabelle , Richard Vincent , Bernard Sophie , Driouich Azeddine , Afonso Carlos , Lerouge Patrice , Mathieu-Rivet Elodie , Bardor Muriel 
Published: August 2017

AbstractEukaryotic N-glycosylation pathways are dependent of N-acetylglucosaminyltransferase I (GnTI), a key glycosyltransferase opening the door to the formation of complex-type N-glycans by transferring a N-acetylglucosamine residue onto the Man5GlcNAc2 intermediate. In contrast, glycans N-linked to Chlamydomonas reinhardtii proteins arise from a GnTI-independent Golgi processing of oligomannosides giving rise to Man5GlcNAc2 substituted eventually with one or two xylose(s). Here, complementation of C. reinhardtii with heterologous GnTI was investigated by expression of GnTI cDNAs originated from Arabidopsis and the diatom Phaeodactylum tricornutum. No modification of the N-glycans was observed in the GnTI transformed cells. Consequently, the structure of the Man5GlcNAc2 synthesized by C. reinhardtii was reinvestigated. Mass spectrometry analyses combined with enzyme sequencing showed that C. reinhardtii proteins carry linear Man5GlcNAc2 instead of the branched structure usually found in eukaryotes. Moreover, characterization of the lipid-linked oligosaccharide precursor demonstrated that C. reinhardtii exhibit a Glc3Man5GlcNAc2 dolichol pyrophosphate precursor. We propose that this precursor is then trimmed into a linear Man5GlcNAc2 that is not substrate for GnTI. Furthermore, cells expressing GnTI exhibited an altered phenotype with large vacuoles, increase of ROS production and accumulation of starch granules, suggesting the activation of stress responses likely due to the perturbation of the Golgi apparatus.
Low-molecular-weight organic acids correlate with cultivar variation in ciprofloxacin accumulation in Brassica parachinensis L.
Authors: Zhao Hai-Ming , Xiang Lei , Wu Xiao-Lian , Jiang Yuan-Neng , Li Hui , Li Yan-Wen , Cai Quan-Ying , Mo Ce-Hui , Liu Jie-Sheng , Wong Ming-Hung 
Published: August 2017

AbstractTo understand the mechanism controlling cultivar differences in the accumulation of ciprofloxacin (CIP) in Chinese flowering cabbage (Brassica parachinensis L.), low-molecular-weight organic acids (LMWOAs) secreted from the roots of high- and low-CIP cultivars (Sijiu and Cutai, respectively) and their effects on the bioavailability of CIP in soil were investigated. Significant differences in the content of LMWOAs (especially maleic acid) between the two cultivars played a key role in the variation in CIP accumulation. Based on the Freundlich sorption coefficient (K
f
) and distribution coefficient (K
d
), the presence of LMWOAs reduced the CIP sorption onto soil particles, and higher concentrations of LMWOAs led to less CIP sorption onto soil. On the other hand, LMWOAs enhanced CIP desorption by lowering the solution pH, which changed the surface charge of soil particles and the degree of CIP ionization. LMWOAs promoted CIP desorption from soil by breaking cation bridges and dissolving metal cations, particularly Cu2+. These results implied that the LMWOAs (mainly maleic acid) secreted from Sijiu inhibited CIP sorption onto soil and improved CIP desorption from soil to a greater extent than those secreted from Cutai, resulting in higher bioavailability of CIP and more uptake and accumulation of CIP in the former.
A systematic analysis of orphan cyclins reveals CNTD2 as a new oncogenic driver in lung cancer
Authors: Gasa L. , Sanchez-Botet A. , Quandt E. , Hernández-Ortega S. , Jiménez J. , Carrasco-García M. A. , Simonetti S. , Kron S. J. , Ribeiro M. P. , Nadal E. , Villanueva A. , Clotet J. 
Published: August 2017

AbstractAs lung cancer has increased to the most common cause of cancer death worldwide, prognostic biomarkers and effective targeted treatments remain lacking despite advances based on patients’ stratification. Multiple core cyclins, best known as drivers of cell proliferation, are commonly deregulated in lung cancer where they may serve as oncogenes. The recent expansion of the cyclin family raises the question whether new members might play oncogenic roles as well. Here, we investigated the protein levels of eight atypical cyclins in lung cancer cell lines and formalin-fixed and paraffin-embedded (FFPE) human tumors, as well as their functional role in lung cancer cells. Of the new cyclins evaluated, CNTD2 was significantly overexpressed in lung cancer compared to adjacent normal tissue, and exhibited a predominant nuclear location. CNTD2 overexpression increased lung cancer cell viability, Ki-67 intensity and clonogenicity and promoted lung cancer cell migration. Accordingly, CNTD2 enhanced tumor growth in vivo on A549 xenograft models. Finally, the analysis of gene expression data revealed a high correlation between elevated levels of CNTD2 and decreased overall survival in lung cancer patients. Our results reveal CNTD2 as a new oncogenic driver in lung cancer, suggesting value as a prognostic biomarker and therapeutic target in this disease.
Towards large-scale in free-standing graphene and N-graphene sheets
Authors: Tatarova E. , Dias A. , Henriques J. , Abrashev M. , Bundaleska N. , Kovacevic E. , Bundaleski N. , Cvelbar U. , Valcheva E. , Arnaudov B. , do Rego A. M. Botelho , Ferraria A. M. , Berndt J. , Felizardo E. , Teodoro O. M. N. D. , Strunskus Th. , Alves L. L. , Gonçalves B. 
Published: August 2017

AbstractOne of the greatest challenges in the commercialization of graphene and derivatives is production of high quality material in bulk quantities at low price and in a reproducible manner. The very limited control, or even lack of, over the synthesis process is one of the main problems of conventional approaches. Herein, we present a microwave plasma-enabled scalable route for continuous, large-scale fabrication of free-standing graphene and nitrogen doped graphene sheets. The method’s crucial advantage relies on harnessing unique plasma mechanisms to control the material and energy fluxes of the main building units at the atomic scale. By tailoring the high energy density plasma environment and complementarily applying in situ IR and soft UV radiation, a controllable selective synthesis of high quality graphene sheets at 2 mg/min yield with prescribed structural qualities was achieved. Raman spectroscopy, scanning electron microscopy, high resolution transmission electron microscopy, X-ray photoelectron spectroscopy and Near Edge X-ray-absorption fine-structure spectroscopy were used to probe the morphological, chemical and microstructural features of the produced material. The method described here is scalable and show a potential for controllable, large-scale fabrication of other graphene derivatives and promotes microwave plasmas as a competitive, green, and cost-effective alternative to presently used chemical methods.
Pupil response components: attention-light interaction in patients with Parinaud’s syndrome
Authors: Binda Paola , Straßer Torsten , Stingl Krunoslav , Richter Paul , Peters Tobias , Wilhelm Helmut , Wilhelm Barbara , Kelbsch Carina 
Published: August 2017

AbstractCovertly shifting attention to a brighter or darker image (without moving one’s eyes) is sufficient to evoke pupillary constriction or dilation, respectively. One possibility is that this attentional modulation involves the pupillary light response pathway, which pivots around the olivary pretectal nucleus. We investigate this possibility by studying patients with Parinaud’s syndrome, where the normal pupillary light response is strongly impaired due to lesions in the pretectal area. Four patients and nine control participants covertly attended (while maintaining fixation at the center of a monitor screen) to one of two disks located in the left and right periphery: one brighter, the other darker than the background. Patients and control subjects behaved alike, showing smaller pupils when attending to the brighter stimulus (despite no eye movements); consistent results were obtained with a dynamic version of the stimulus. We interpret this as proof of principle that attention to bright or dark stimuli can dynamically modulate pupil size in patients with Parinaud’s syndrome, suggesting that attention acts independently of the pretectal circuit for the pupillary light response and indicating that several components of the pupillary response can be isolated – including one related to the focus of covert attention.
Modification of the response of olfactory receptors to acetophenone by CYP1a2
Authors: Asakawa Masashi , Fukutani Yosuke , Savangsuksa Aulaphan , Noguchi Keiich , Matsunami Hiroaki , Yohda Masafumi 
Published: August 2017

AbstractOlfaction is mediated by the binding of odorant molecules to olfactory receptors (ORs). There are numerous proteins in the nasal mucus, and they contribute to olfaction through various mechanisms. Cytochrome P450 (CYP) family members are known to be present in the olfactory epithelium and are thought to affect olfaction by enzymatic conversion of odorant molecules. In this study, we examined the effects of CYPs on the ligand responses of ORs in heterologous cells. Among the CYPs tested, co-expression of CYP1a2 significantly affected the responses of various ORs, including MOR161-2, to acetophenone. Conversion of acetophenone to methyl salicylate was observed in the medium of CYP1a2-expressing cells. MOR161-2-expressing cells exhibited significantly greater responses to methyl salicylate than to acetophenone. Finally, we analyzed the responses of olfactory neurons expressing MOR161-2 in vivo using the phosphorylated ribosomal protein S6 as a marker. MOR161-2 responded to both acetophenone and methyl salicylate in vivo. When the olfactory mucus was washed out by the injection of PBS to mouse nasal cavity, the response of MOR161-2 to acetophenone was reduced, while that to methyl salicylate did not change. Our data suggest that CYP1a2 affects OR activation by converting acetophenone to methyl salicylate.
Fatigue-Assisted Grain Growth in Al Alloys
Authors: Goswami R. , Feng C. R. , Qadri S. B. , Pande C. S. 
Published: August 2017

AbstractStress-assisted grain growth at room temperature is known for materials with nanocrystalline grains. For larger grain sizes, the grain growth usually takes place at higher homologous temperatures even under stress. Here we report, for the first time, significant grain growth at room temperature under fatigue loading in microcrystalline grains (≥10 μm) in Al 7075. We demonstrate that this grain growth at room temperature is similar to non-uniform grain growth due to grain rotation and coalescence rather than the thermally and the stress-assisted driven grain growth. We show that the grain growth is associated with the formation of a strong near-Cu {112}<111> texture component as a result of fatigue-assisted deformation. These changes in microstructural features (viz., grain size, grain orientations and texture) are fundamentally important in understanding the cyclic crack induced deformation behavior and for predicting the fatigue lifetime in structural materials.
Self-induction system for cellulase production by cellobiose produced from glucose in Rhizopus stolonifer
Authors: Zhang Yingying , Tang Bin , Du Guocheng 
Published: August 2017

AbstractCellulolytic fungi have evolved a sophisticated genetic regulatory network of cellulase synthesis to adapt to the natural environment. Even in the absence of lignocellulose, it still secretes low levels of “constitutive” cellulase for standby application. However, the mechanisms of this constitutive expression remain incompletely understood. Here we identified a cellobiose synthetase (CBS) from Rhizopus stolonifer, which has the capacity to catalyse the synthesis of cellobiose from uridine diphosphate glucose (UDPG). Through the construction of R. stolonifer Δcbs strain, we found that CBS plays a key role in the synthesis of cellulase. Further analysis of cellulase synthesis under glucose culture reveals that the cellobiose-responsive regulator CLR1 was activated by CBS-synthesized cellobiose, thereby promoting the expression of CLR2 and finally opening the transcription of cellulase genes. Our results suggest that R. stolonifer can be induced by self-synthesized cellobiose to produce cellulase, which can be used to reconstruct the expression regulation network to achieve rapid production of cellulase using simple carbon source. Based on our data, the “constitutive expression” of cellulase actually derives from the induction of cellobiose that synthesized by CBS from carbohydrate metabolites, which updates our knowledge of cellulase, and provides a novel insight into the regulation of cellulase synthesis.
Elevated mean platelet volume predicts poor prognosis in colorectal cancer
Authors: Li Na , Yu Zhiwei , Zhang Xin , Liu Tiemin , Sun Yu-xiang , Wang Rui-tao , Yu Kai-jiang 
Published: August 2017

AbstractAltered mean platelet volume (MPV) is implicated in several malignancies. However, the clinicopathological significance and prognostic value of MPV in colorectal cancer (CRC) is still elusive. The purpose of this study was to elucidate the predictive significance of MPV in CRC. The retrospective study recruited 509 consecutive CRC patients between January 2009 and December 2009. The relationships between MPV and clinicopathological characteristics were analyzed. Kaplan-Meier method and Cox regression were used to evaluate the prognostic impact of MPV. Of the 509 CRC patients, high MPV levels were detected in 150 (29.5%) patients. Elevated MPV was associated with tumor differentiation (p < 0.001). Patients with increased MPV had poor overall survival compared with those with normal level (60.0% vs. 83.6%, log-rank test, p = 0.035). Cox regression analysis showed that MPV was an independent prognostic factor in CRC (HR = 1.452, 95% CI = 1.118–1.884, p = 0.005). In conclusion, MPV is easily available in routine blood test. Elevated MPV might act as a marker of prognosis and therapeutic target for CRC.
Features of cardiac remodeling in Patients with Acute Coronary Syndrome Complicated with Rheumatoid Arthritis
Authors: Pan Lili , Wang Tian 
Published: August 2017

AbstractCardiovascular diseases are important factors to increased morbidity and mortality in patients with rheumatoid arthritis (RA). The aim of this study is to investigate the effects of RA on cardiac remodeling in patients with acute coronary syndrome (ACS). Sixty-one patients with ACS complicated with RA (RA group) and 55 age- and sex-matched patients with ACS without RA (control group) were enrolled. We compared the parameters of laboratory and echocardiogram across the 2 groups. Levels of serum brain natriuretic peptide in patients with RA were significantly higher than control group. Prevalence of left ventricular hypertrophy (LVH), and LV diastolic dysfunction (E/A < 1) were significantly higher in the RA patients, while the LV ejection fraction (EF%) was significantly lower in RA patients. Incidence of tricuspid regurgitation and pulmonary regurgitation were significantly higher in ACS patients with RA than in the ACS patients without RA. In RA group, levels of serum high density lipoprotein cholesterol were negatively correlated with C reactive protein (CRP), EF% was also negatively correlated with CRP. The prevalence of LVH and mitral regurgitation showed positive correlations with ESR. Early intervention for controlling the inflammation associated with RA can play a significant role in preventing cardiac remodeling in ACS patients.