bluuebunny/crossref_metadata_2025_split huggingface dataset:
Possible Impact of Wide-scale Vaccination Against Serogroup B Neisseria Meningitidis on Gonorrhea Incidence Rates in One Region of Quebec, Canada
Authors: Longtin Jean , Dion Rejean , Simard Marc , Betala Belinga Jean-Francois , Longtin Yves , Lefebvre Brigitte , Labbé Annie-Claude , Deceuninck Genevieve , De Wals Philippe 
Published: October 2017

Abstract

Background
Owing to a persistent increase of serogroup B Neisseria meningitidis (Nm) invasive infections in the Saguenay-Lac-Saint-Jean (SLSJ) region of the province of Quebec (Canada) since 2006, a wide-scale vaccination campaign of individuals aged 6 months to 20 years was conducted between May and December 2014 using the 4-component protein-based meningococcus serogroup B vaccine (4CMenB). Components of this vaccine have shown to potentially cross-react with Neisseria gonorrhoeae (Ng). The study objective was to assess the impact of the vaccination campaign on Ng incidence rate (IR).

Methods
Ng cases notified to public health authorities during prevaccination period (January 2006 to June 2014) and postvaccination period (July 2014 to June 2017) were analyzed. The impact of this mass campaign was estimated by a Poisson regression model, including the year (11 July–June categories), age (14–20 vs. 21 years and older), and the intervention (0 by default and 1 in those 14–20 years in the period of July 2014 to June 2017).

Results
Overall vaccine coverage was 82% in the target group. A total of 231 Ng cases were reported among persons 14 years and older (IR: 8.4/100,000 person-years) of the SLSJ region from January 2006 to June 2017. A decrease in the Ng number of cases and IR among individuals 14–20 years was observed during the post-vaccination period whereas it increased in those 21 years and older (figure). Estimate of vaccination impact was an Ng risk reduction of 59% (95% CI: −22% to 84%; P = 0.1). During the same period, Chlamydia trachomatis (Ct) infections increased among persons of both age groups in the SLSJ region.

Conclusion
Although the estimate of the impact of the campaign was not statistically significant, possibly due to limited size of the study population and the low incidence of the disease, it is congruent with results of a case–control study in New Zealand showing an OMV-MeNZB vaccine effectiveness of 31%. A higher effectiveness of 4CMenB is a plausible hypothesis as three additional proteins also found in Ng are included in the vaccine used in the SLSJ region. The results of this ecologic study suggest cross-protection of 4CMenB vaccine against Ng infections. Further studies on this topic are warranted.

Disclosures
P. De Wals, GlaxoSmithKline: Grant Investigator and Scientific Advisor, Grant recipient and travel expenses. Pfizer: Grant Investigator and Scientific Advisor, Grant recipient and travel expenses. Sanofi-Pasteur: Grant Investigator and Scientific Advisor, Grant recipient and travel expenses. Novartis: Grant Investigator and Scientific Advisor, Grant recipient and travel expenses.
Kilonova from post-merger ejecta as an optical and near-Infrared counterpart of GW170817
Authors: Tanaka Masaomi , Utsumi Yousuke , Mazzali Paolo A. , Tominaga Nozomu , Yoshida Michitoshi , Sekiguchi Yuichiro , Morokuma Tomoki , Motohara Kentaro , Ohta Kouji , Kawabata Koji S. , Abe Fumio , Aoki Kentaro , Asakura Yuichiro , Baar Stefan , Barway Sudhanshu , Bond Ian A. , Doi Mamoru , Fujiyoshi Takuya , Furusawa Hisanori , Honda Satoshi , Itoh Yoichi , Kawabata Miho , Kawai Nobuyuki , Kim Ji Hoon , Lee Chien-Hsiu , Miyazaki Shota , Morihana Kumiko , Nagashima Hiroki , Nagayama Takahiro , Nakaoka Tatsuya , Nakata Fumiaki , Ohsawa Ryou , Ohshima Tomohito , Okita Hirofumi , Saito Tomoki , Sumi Takahiro , Tajitsu Akito , Takahashi Jun , Takayama Masaki , Tamura Yoichi , Tanaka Ichi , Terai Tsuyoshi , Tristram Paul J. , Yasuda Naoki , Zenko Tetsuya 
Published: October 2017

Abstract
Recent detection of gravitational waves from a neutron star (NS) merger event GW170817 and identification of an electromagnetic counterpart provide a unique opportunity to study the physical processes in NS mergers. To derive properties of ejected material from the NS merger, we perform radiative transfer simulations of kilonova, optical and near-infrared emissions powered by radioactive decays of r-process nuclei synthesized in the merger. We find that the observed near-infrared emission lasting for &gt;10 d is explained by 0.03 M⊙ of ejecta containing lanthanide elements. However, the blue optical component observed at the initial phases requires an ejecta component with a relatively high electron fraction (Ye). We show that both optical and near-infrared emissions are simultaneously reproduced by the ejecta with a medium Ye of ∼0.25. We suggest that a dominant component powering the emission is post-merger ejecta, which exhibits that the mass ejection after the first dynamical ejection is quite efficient. Our results indicate that NS mergers synthesize a wide range of r-process elements and strengthen the hypothesis that NS mergers are the origin of r-process elements in the Universe.
Prospects for adoptive T-cell therapy for invasive fungal disease
Authors: Castellano-Gonzalez Gloria , Clancy Leighton E. , Gottlieb David 
Published: October 2017

Purpose of review
Invasive fungal disease (IFD) is a cause of morbidity and mortality in allogeneic hematopoietic stem cell transplant (HSCT) recipients. As more potent broad-spectrum antifungal agents are used in prophylaxis, drug resistance and less common fungal species have increased in frequency. Here we review current treatments available for IFD and examine the potential for adoptive T-cell treatment to enhance current therapeutic choices in IFD.

Recent findings
There is growing evidence supporting the role of T cells as well as phagocytes in antifungal immunity. T cells recognizing specific antigens expressed on fungal morphotypes have been identified and the role of T-cell transfer has been explored in animal models. The clinical efficacy of adoptive transfer of antigen-specific T cells for prophylaxis and treatment of viral infections post-HSCT has raised interest in developing good manufacturing practice (GMP)-compliant methods for manufacturing and testing fungus-specific T cells after HSCT.

Summary
As the outcomes of IFD post-HSCT are poor, reconstitution of antifungal immunity offers a way to correct the underlying deficiency that has caused the infection rather than simply pharmacologically suppress fungal growth. The clinical development of fungus specific T cells is in its early stages and clinical trials are needed in order to evaluate safety and efficacy.
Advances in the understanding and management of mucositis during stem cell transplantation
Authors: Bowen Joanne M. , Wardill Hannah R. 
Published: October 2017

Purpose of review
Mucositis is a severe and common side effect of anticancer treatments, with an incidence of between 40 and 80% depending on the cytotoxic regimen used. The most profound mucositis burden is experienced during conditioning regimens for hematopoietic stem cell transplant (HSCT), where the use of highly mucotoxic agents with or without total body irradiation leads to serious damage throughout the alimentary tract. Currently, the assessment and management of both oral and gastrointestinal mucositis lack authoritative guideline, with recommendations only achieved in narrow clinical scenarios. This review provides a brief overview of current management guidelines for mucositis in both adult and pediatric patients receiving HSCT, highlights recent advances in mucositis prevention and discusses future research avenues.

Recent findings
The Multinational Association of Supportive Care in Cancer and International Society for Oral Oncology (MASCC/ISOO) guidelines for the prevention of mucositis in HSCT are scarce, with low level laser therapy (photobiomodulation) and palifermin only recommended for oral mucositis. Loperamide and octreotide remain gold-standard for the treatment of diarrhea, despite poor efficacy. Although several interventions have been trialled in pediatric cohorts, no recommendations currently exist for children receiving high-dose chemotherapy or total body irradiation for HSCT.

Summary
HSCT continues to be associated with mucositis, which impacts on patients’ ability and willingness to receive engraftment, and worsens clinical outcome. Research into the prevention and treatment of mucositis in this setting remains limited, with an overwhelming amount of small, single-center studies that fail to achieve a sufficient level of evidence that warrant recommendation(s). As such, our ability to manage mucotoxic side effects of high-dose chemotherapy and irradiation is limited, particularly in children.
The effects of cryopreserved red blood cell transfusion on tissue oxygenation in obese trauma patients
Authors: McCully Belinda H. , Underwood Samantha J. , Kiraly Laszlo , Holcomb John B. , Robinson Bryce R.H. , Minei Joseph P. , Stewart Ronald M. , Cotton Bryan A. , Gordon Nicole T. , Martin David T. , Rick Elizabeth A. , Dean Rondi K. , Wiles Connor , Anderson Nathan , Schreiber Martin A. 
Published: October 2017

BACKGROUND
Low tissue oxygenation (StO2) is associated with poor outcomes in obese trauma patients. A novel treatment could be the transfusion of cryopreserved packed red blood cells (CPRBCs), which the in vitro biochemical profile favors red blood cell (RBC) function. We hypothesized that CPRBC transfusion improves StO2 in obese trauma patients.

METHODS
Two hundred forty-three trauma patients at five Level I trauma centers who required RBC transfusion were randomized to receive one to two units of liquid packed RBCs (LPRBCs) or CPRBCs. Demographics, injury severity, StO2, outcomes, and biomarkers of RBC function were compared in nonobese (body mass index [BMI] < 30) and obese (BMI ≥ 30) patients. StO2 was also compared between obese patients with BMI of 30 to 34.9 and BMI ≥ 35. StO2 was normalized and expressed as % change after RBC transfusion. A p value less than 0.05 indicated significance.

RESULTS
Patients with BMI less than 30 (n = 141) and BMI of 30 or greater (n = 102) had similar Injury Severity Score, Glasgow Coma Scale, and baseline StO2. Plasma levels of free hemoglobin, an index of RBC lysis, were lower in obese patients after CPRBC (125 [72–259] μg/mL) versus LPRBC transfusion (230 [178–388] μg/mL; p < 0.05). StO2 was similar in nonobese patients regardless of transfusion type, but improved in obese patients who received CPRBCs (104 ± 1%) versus LPRPCs (99 ± 1%, p < 0.05; 8 hours after transfusion). Subanalysis showed improved StO2 after CPRBC transfusion was specific to BMI of 35 or greater, starting 5 hours after transfusion (p < 0.05 vs. LPRBCs). CPRBCs did not improve clinical outcomes in either group.

CONCLUSION
CPRBC transfusion is associated with increased StO2 and lower free hemoglobin levels in obese trauma patients, but did not improve clinical outcomes. Future studies are needed to determine if CPRBC transfusion in obese patients attenuates hemolysis to improve StO2.

LEVEL OF EVIDENCE
Therapeutic, level IV.
Diet predicts milk composition in primates
Authors: Blomquist Gregory E. , Hinde Katie , Milligan Newmark Lauren A. 
Published: October 2017

AbstractMammalian mothers pay heavy energetic costs to fuel the growth of their offspring. These costs are highest during lactation. Energy transmitted to offspring in the form of milk must ultimately come from the maternal diet, but there have been few comparative studies of the relationship between milk properties and mammalian diets. We used interspecific data on primate milk composition and wild diets to establish that concentrations of milk protein and sugar are predicted by diet independent of maternal mass, litter mass, and infant parking behavior such that increasing folivory or faunivory increases protein concentration but decreases sugar concentration. Milk energy density is unrelated to diet, though infant parking species do produce more energy-dense milk. While parking effects have been previously explained as a result of mother-infant separation, the mechanisms causing the relationship between nutrient packaging in milk and maternal diet are currently unclear. However, they likely reflect evolved differences in maternal energetics related to maternal foraging ecology, infant growth patterns, or the relative dietary abundance of nutrients costly to synthesize in milk among primate species.
Independent erosion of conserved transcription factor binding sites points to shared hindlimb, vision, and scrotum loss in different mammals
Authors: Berger Mark J. , Wenger Aaron M. , Guturu Harendra , Bejerano Gill 
Published: October 2017

AbstractGenetic variation incis-regulatory elements is thought to be a major driving force in morphological and physiological change. However, identifying transcription factor binding events which code for complex traits remains a challenge, motivating novel means of detecting putatively important binding events. Using a curated set of 1,154 high-quality transcription factor motifs, we demonstrate that independently eroded binding sites are enriched for independently lost traits in three distinct pairs of placental mammals. We show that these independently eroded events pinpoint the loss of hindlimbs in dolphin and manatee, degradation of vision in naked mole-rat and star-nosed mole, and the loss of scrotum in white rhinoceros and Weddell seal. Our study exhibits a novel methodology to detectcis-regulatory mutations which help explain a portion of the molecular mechanism underlying complex trait formation and loss.Author SummaryEvolution has produced an astounding variety of species with incredibly diverse phenotypes. A central question in evolutionary developmental biology is how (and which) DNA evolves to encode all of these different traits. A prevailing hypothesis is that changes in regulatory DNA, short stretches of DNA which control the expression of protein-coding genes, drive important differences in trait formation between species. The basic building block of regulatory DNA is thought to be transcription factor binding sites, shortl genomic sequences which attract proteins whose central role is to control the rate of transcription. In this study, we asked whether the independent erosion of otherwise highly conserved transcription factor binding sites points to a trait shared between species which have undergone similar adaptations. We show that our method is able to point to the loss of hindlimbs in dolphin and manatee, poor vision in naked mole-rat and star-nosed mole, and loss of scrotum in Weddell seal and white rhinoceros. Overall, our study exhibits a means of detecting evolutionarily important genomic regions which help explain a portion of complex trait loss and retention.
Single-exposure visual memory judgments are reflected in IT cortex
Authors: Meyer Travis , Rust Nicole C. 
Published: October 2017

AbstractOur visual memory percepts of whether we have encountered specific objects or scenes before are hypothesized to manifest as decrements in neural responses in inferotemporal cortex (IT) with stimulus repetition. To evaluate this proposal, we recorded IT neural responses as two monkeys performed a single-exposure visual memory task designed to measure the rates of forgetting with time. We found that a weighted linear read-out of IT was a better predictor of the monkeys’ forgetting rates and reaction time patterns than a strict instantiation of the repetition suppression hypothesis, expressed as a total spike count scheme. Behavioral predictions could be attributed to visual memory signals that were reflected as repetition suppression and were intermingled with visual selectivity, but only when combined across the most sensitive neurons.
Temporal differentiation of bovine airway epithelial cells grown at an air-liquid interface
Authors: Cozens Daniel , Sutherland Erin , Marchesi Francesco , Taylor Geraldine , Berry Catherine , Davies Robert 
Published: October 2017

AbstractThe respiratory epithelium is exposed to assault by toxins and pathogens through the process of inhalation, which has numerous implications on both human and animal health. As such, there is a need to develop and characterise anin vitromodel of the airway epithelium to study respiratory pathologies during infection or toxicology experiments. This has been achieved by growing airway epithelial cells at an air-liquid interface (ALI). Characterisation of ALI models are not well-defined for airway epithelial cells derived from non-human species. In this study we have fully characterised a bovine airway epithelial cell models (AECM) grown at an ALI in relation toex vivotissue. The morphology of the model was monitored at three day intervals, to identify the time-period at which the culture was optimally differentiated. The model was shown to be fully-differentiated by day 21 post-ALI. The culture formed a stereotypical pseudostratified, columnar epithelium containing the major cell types of the bronchial epithelium (ciliated-, goblet- and basal cells). Once fully differentiated the bovine AECM displayed both barrier function, through the formation of tight-junctions, and active mucociliary clearance, important properties of the mucosal barrier. The bovine bronchial epithelial cells remained stable for three weeks, with no evidence of deterioration or dedifferentiation. The window in which the model displayed full differentiation was determined to be between day 21-42 post-ALI. Through comparison withex vivotissue derived from donor animals, our bovine AECM was shown to be highly representative of thein vivobovine bronchial epithelium and can be utilised in the study of respiratory pathologies.
RhoGEF9 splice isoforms influence neuronal maturation and synapse formation downstream ofα2 GABAAreceptors
Authors: deGroot Claire , Floriou-Servou Amalia , Tsai Yuan-Chen , Früh Simon , Kohler Manuela , Parkin Georgia , Schwerdel Cornelia , Bosshard Giovanna , Kaila Kai , Fritschy Jean-Marc , Tyagarajan Shiva K. 
Published: October 2017

AbstractIn developing brain neuronal migration, dendrite outgrowth and dendritic spine outgrowth are controlled by Cdc42, a small GTPase of the Rho family, and its activators. Cdc42 function in promoting actin polymerization is crucial for glutamatergic synapse regulation. Here, we focus on GABAergic synapse-specific activator of Cdc42, collybistin (CB) and examine functional differences between its splice isoforms CB1 and CB2. We report that CB1 and CB2 differentially regulate GABAergic synapse formationin vitroalong proximal-distal axis and adult-born neuron maturationin vivo. The functional specialization between CB1 and CB2 isoforms arises from their differential protein half-life, in turn regulated by ubiquitin conjugation of the unique CB1 C-terminus. We report that CB1 and CB2 negatively regulate Cdc42; however, Cdc42 activation is dependent on CB interaction with gephyrin. During hippocampal adult neurogenesis CB1 regulates neuronal migration, while CB2 is essential for dendrite outgrowth. Finally, using mice lackingGabra2subunit, we show that CB1 function is downstream of GABAARs, and we can rescue adult neurogenesis deficit observed inGabra2KO. Overall, our results uncover previously unexpected role for CB isoforms downstream of α2-containing GABAARs during neuron maturation in a Cdc42 dependent mechanism.Author SummaryGABAergic inhibition regulates distinct stages of brain development; however, cellular mechanisms downstream of GABAAreceptors (GABAARs) that influence neuronal migration, maturation and synaptogenesis are less clear.ArfGEF9encodes for RhoGEF with Cdc42 and TC10 GTPase as its substrates. Interestingly, ArhGEF9 is the only known RhoGEF essential for GABAergic synapse formation and maintenance. We report that during brain development ArfGEF9 mRNA splicing regulation generates different ratios of CB1 and CB2 splice isoforms. CB1 mRNA splicing is enhanced during early brain developmental, while CB2 levels remains constant throughout brain development. We also show that CB1 protein has shorter half-life and ubiquitin proteasome system restricts CB1 abundance within developing neuron to modulate neuron migration and distributing GABAergic synapse along the proximal-distal axis. On the other hand, CB2 isoform although expressed abundantly throughout brain development is essential for neuron dendrite maturation. Together, our data identifies specific post-transcriptional and post-translational mechanisms downstream of GABAARs influencing ArhGEF9 function to regulate distinct aspects of neuronal maturation process.
Females prefer cooperative males even when cooperative behavior is unobserved: evidence from the mound-building mouse,Mus spicilegus
Authors: Tognetti Arnaud , Raymond Michel , Ganem Guila , Faurie Charlotte 
Published: October 2017

AbstractTheoretical and empirical studies in humans suggest that cooperative behaviors may act as signals during mate choice. However, cooperation is not always observable by potential partners before mate choice. To address whether cooperative phenotypes are preferred based on cues different from cooperative behaviorsper se,we designed an experimental paradigm using wild-born mound-building mice (Mus spicilegus), a species with biparental care. In this species, females cannot observe male cooperative behaviors: mate choice occurs in the spring, whereas mounds are cooperatively built in the fall. We first assessed the variation in mound building investment and identified males exhibiting high and low amounts of cooperation. Second, we presented these males to females during two-way choice tests. As offspring survival relies on mound protection, we hypothesized that mound building could be a form of paternal care and assessed whether cooperative males were more involved in offspring attendance using pup-retrieval experiments. Our results indicate that females were more attracted to highly cooperative males over less cooperative, even when they did not observe them build. This finding suggests that female mate choice is influenced either by cues of cooperativeness different than cooperative behaviors or by preferences for traits associated with cooperativeness. Moreover, male offspring attendance was negatively correlated with cooperativeness, suggesting the potential existence of two alternative paternal strategies in offspring care (mound building versus offspring attendance). Overall, our findings support the existence of preference for cooperative phenotypes in a non-human species and suggest that sexual selection might be involved in the evolution of cooperation.