bluuebunny/crossref_metadata_2025_split huggingface dataset:
Yawning in sync: implications for social cohesion in horses
Authors: Galotti Alice , Romano Martina , Baragli Paolo , Palagi Elisabetta 
Published: September 2024

Abstract
The increasing interest in the study of spontaneous (SY) and contagious yawning (CY) was so far focused on several taxa, especially primates. Here, we focused on SY and CY in horses, a suitable species due to their complex social dynamics that has been largely overlooked in research on these phenomena. By analyzing videos of 48 horses on pasture, we identified 2 yawning morphologies: Covered (YCT) and Uncovered Teeth (YUCT). Using EquiFACS, we quantitatively demonstrated that YCT and YUCT differ in terms of muscle recruitment. Moreover, we provide the first evidence for the presence of CY by comparing 2 different conditions: chewing-yawn-chewing versus chewing-chewing-chewing. Supporting the Social Modulation hypothesis, in our mares, CY was more prominent among subjects sharing good relationships. Moreover, subjects responded more rapidly to kin compared with non-kin and kin frequently grooming each other responded even more rapidly to each other yawns. The high familiar yawn sensitivity can provide selective advantages increasing behavioral synchronization and group cohesion.
Functional reproductive morphology of the snapping shrimp genus Synalpheus Spence Bate, 1888 (Decapoda, Alpheidae)
Authors: Moraes Isabela R R , Antunes Mariana , López-Greco Laura S , Zara Fernando José , Castilho Antonio Leão 
Published: September 2024

Abstract
Shrimps of the genus Synalpheus (Caridea) are commonly found in subtropical and tropical marine habitats around the world. The present work aims to provide the first description of the reproductive system of this genus using histological, histochemical, and morphological perspectives to elucidate the gonochoric or hermaphrodite sexual system in this genus. Males have a slender and very translucent reproductive system that is challenging to observe. The entire cephalothorax was histologically sectioned to ensure that all regions of the reproductive system could be identified. This non-gambarelloides group shows a gonochoric condition. The caridean pattern of the reproductive system was observed where the male has a pair of testes and a pair of very thin vasa deferentia, ending at the opening of the gonopore. Spermatophore structure is absent, without any layers surrounding the spermatozoa that are aggregated in a sperm mass. In females, the reproductive system consists of a pair of ovaries that extend to the end of the pleon. The extension of the ovary has a particular pattern compared to other caridean shrimps. Here, we hypothesize that males invest energy on somatic morphological structures to protect the host and female, using the larger pistol-like cheliped, while females invest energy in reproduction since all the members of this group are typical “pair-bond” examples. The observed pattern of the reproductive male morphology could also be evidence of a possible synapomorphy for this genus within the infraorder.
Oxidized Polyunsaturated Fatty Acid Promotes Colitis and Colitis-Associated Tumorigenesis in Mice
Authors: Wang Weicang , Wang Yuxin , Sanidad Katherine Z , Wang Yige , Zhang Jianan , Yang Wenqi , Sun Quancai , Bayram Ipek , Song Renhua , Yang Haixia , Johnson David , Sherman Heather L , Kim Daeyoung , Minter Lisa M , Wong Justin J-L , Zeng Melody Y , Decker Eric A , Zhang Guodong 
Published: September 2024

Abstract

Background and Aims
Human studies suggest that a high intake of polyunsaturated fatty acid (PUFA) is associated with an increased risk of inflammatory bowel disease (IBD). PUFA is highly prone to oxidation. To date, it is unclear whether unoxidized or oxidized PUFA is involved in the development of IBD. Here, we aim to compare the effects of unoxidized PUFA vs oxidized PUFA on the development of IBD and associated colorectal cancer.

Methods
We evaluated the effects of unoxidized and oxidized PUFA on dextran sodium sulfate (DSS)-induced and IL-10 knockout-induced colitis, and azoxymethane/DSS-induced colon tumorigenesis in mice. Additionally, we studied the roles of gut microbiota and Toll-like receptor 4 (TLR4) signaling involved.

Results
Administration of a diet containing oxidized PUFA, at human consumption-relevant levels, increases the severity of colitis and exacerbates the development of colitis-associated colon tumorigenesis in mice. Conversely, a diet rich in unoxidized PUFA does not promote colitis. Furthermore, oxidized PUFA worsens colitis-associated intestinal barrier dysfunction and leads to increased bacterial translocation, and it fails to promote colitis in TLR4 knockout mice. Finally, oxidized PUFA alters the diversity and composition of gut microbiota, and it fails to promote colitis in mice lacking the microbiota.

Conclusions
These results support that oxidized PUFA promotes the development of colitis and associated tumorigenesis in mouse models via TLR4- and gut microbiota-dependent mechanisms. Our findings highlight the potential need to update regulation policies and industrial standards for oxidized PUFA levels in food.
The effect of fixed and functional remodelling on conduction velocity, wavefront propagation, and rotational activity formation in atrial fibrillation
Authors: Honarbakhsh Shohreh , Horrach Caterina Vidal , Lambiase Pier D , Roney Caroline , Hunter Ross J 
Published: September 2024

Abstract

Aims
Pathophysiology of atrial fibrillation (AF) remains unclear. Interactions between scar and conduction velocity (CV) and their impact on wavefront propagation in sinus rhythm (SR) and rotational activity burden in AF were evaluated.

Methods and results
Local activation times (LATs) and voltage data were obtained from patients undergoing ablation for persistent AF. Omnipolar voltage (OV) and bipolar voltage (BV) data were obtained during AF and SR at pacing intervals of 600 and 250 ms. Local activation times were used to determine CV dynamics and their relationship to the underlying voltage and pivot points in SR. Computational modelling studies were performed to evaluate the impact of CVs and fibrosis on rotational activity burden in AF. Data from 60 patients with a total of 2 768 400 LAT and voltage points were analysed (46 140 ± 5689 points/patient). Voltage determined CV dynamics. Enhanced CV heterogeneity sites were predominantly mapped to low-voltage zones (LVZs) (0.2–0.49 mV) (128/168, 76.2%) rather than LVZs (&lt;0.2 mV) and frequently co-located to pivot points (151/168, 89.9%). Atrial fibrillation OV maps correlated better with SR BV 250 ms than 600 ms maps, thereby representing fixed and functional remodelling. Sinus rhythm maps at 250 ms compared with 600 ms harboured a greater number of pivot points. Increased CV slowing and functional remodelling on computational models resulted in a greater rotational activity burden.

Conclusion
Conduction velocity dynamics are impacted by the degree of scar. Conduction velocity heterogeneity and functional remodelling impacts wavefront propagation in SR and rotational activity burden in AF. This study provides insight into the pathophysiology of AF and identifies potential novel ablation targets.
Morphological evolution and niche conservatism across a continental radiation of Australian blindsnakes
Authors: Tiatragul Sarin , Skeels Alexander , Keogh J Scott 
Published: September 2024

Abstract
Understanding how continental radiations are assembled across space and time is a major question in macroevolutionary biology. Here, we use a phylogenomic-scale phylogeny, a comprehensive morphological dataset, and environmental niche models to evaluate the relationship between trait and environment and assess the role of geography and niche conservatism in the continental radiation of Australian blindsnakes. The Australo-Papuan blindsnake genus, Anilios, comprises 47 described species of which 46 are endemic to and distributed across various biomes on continental Australia. Although we expected blindsnakes to be morphologically conserved, we found considerable interspecific variation in all morphological traits we measured. Absolute body length is negatively correlated with mean annual temperature, and body shape ratios are negatively correlated with soil compactness. We found that morphologically similar species are likely not a result of ecological convergence. Age-overlap correlation tests revealed niche similarity decreased with the relative age of speciation events. We also found low geographical overlap across the phylogeny, suggesting that speciation is largely allopatric with low rates of secondary range overlap. Our study offers insights into the eco-morphological evolution of blindsnakes and the potential for phylogenetic niche conservatism to influence continental scale radiations.
Contrasting macroevolutionary patterns in pelagic tetrapods across the Triassic–Jurassic transition
Authors: Laboury Antoine , Stubbs Thomas L , Wolniewicz Andrzej S , Liu Jun , Scheyer Torsten M , Jones Marc E H , Fischer Valentin 
Published: September 2024

Abstract
The iconic marine raptorial predators Ichthyosauria and Eosauropterygia co-existed in the same ecosystems throughout most of the Mesozoic Era, facing similar evolutionary pressures and environmental perturbations. Both groups seemingly went through a massive macroevolutionary bottleneck across the Triassic–Jurassic (T/J) transition that greatly reduced their morphological diversity, leaving pelagic lineages as the only survivors. However, analyses of marine reptile disparity across the T/J transition have usually employed coarse morphological and temporal data. We comprehensively compare the evolution of ichthyosaurian and eosauropterygian morphology and body size across the Middle Triassic to Early Jurassic interval and find contrasting macroevolutionary patterns. The ecomorphospace of eosauropterygians predominantly reflects a strong phylogenetic signal, resulting in the clustering of three clades with clearly distinct craniodental phenotypes, suggesting “leaps” toward novel feeding ecologies. Ichthyosaurian diversification lacks a discernible evolutionary trend, as we find evidence for a wide overlap of craniodental morphologies between Triassic and Early Jurassic forms. The temporal evolution of ecomorphological disparity, fin shape and body size of eosauropterygians and ichthyosaurians during the Late Triassic does not support the hypothesis of an abrupt macroevolutionary bottleneck near the T/J transition. Rather, an important turnover event should be sought earlier, during times of rapid sea level falls.
An Update on Highly Pathogenic Avian Influenza A(H5N1) Virus, Clade 2.3.4.4b
Authors: Webby Richard J , Uyeki Timothy M 
Published: September 2024

Abstract
Since the resurgence of highly pathogenic avian influenza (HPAI) A(H5N1) virus, clade 2.3.4.4b, during 2021, these viruses have spread widely among birds worldwide, causing poultry outbreaks and infections of a wide range of terrestrial and marine mammal species. During 2024, HPAI A(H5N1) virus, clade 2.3.4.4b, was detected in dairy cattle for the first time and caused an ongoing multistate outbreak, with high levels of virus documented in raw cow milk. Human infections with clade 2.3.4.4b viruses from exposures to infected poultry or dairy cattle have resulted in a wide spectrum of illness severity, from conjunctivitis or mild respiratory illness to severe and fatal pneumonia in different countries. Vigilance, and stronger global virologic surveillance among birds, poultry, terrestrial and marine mammals, and humans, with virus characterization and rapid data sharing, is needed to inform the threat of clade 2.3.4.4b viruses, as they continue to evolve, to public health.
Immunogenicity and Reactogenicity of High- or Standard-Dose Influenza Vaccine in a Second Consecutive Influenza Season
Authors: Bahakel Hannah , Spieker Andrew J , Hayek Haya , Schuster Jennifer E , Hamdan Lubna , Dulek Daniel E , Kitko Carrie L , Stopczynski Tess , Batarseh Einas , Haddadin Zaid , Stewart Laura S , Stahl Anna , Potter Molly , Rahman Herdi , Amarin Justin , Kalams Spyros A , Bocchini Claire E , Moulton Elizabeth A , Coffin Susan E , Ardura Monica I , Wattier Rachel L , Maron Gabriela , Grimley Michael , Paulsen Grant , Harrison Christopher J , Freedman Jason , Carpenter Paul A , Englund Janet A , Munoz Flor M , Danziger-Isakov Lara , Halasa Natasha ,   for the Pediatric HCT Flu Study, Goyal Rakesh , McHenry Rendie , Bender Margaret , Barto Shari , Russo Michael , Shoemaker Lauren , Truong Kenny , Dvorak Christopher , Allison Kim J , Naik Swati , Williams Christopher , Blum Samantha , Lacombe Kirsten , Smith Hannah 
Published: September 2024

Abstract

Background
Pediatric hematopoietic cell transplant (HCT) recipients are at high risk for morbidity from influenza virus infection. We demonstrated in a primary phase 2 randomized controlled trial that 2 post-HCT doses of high-dose trivalent influenza vaccine (HD-TIV) given 4 weeks apart were more immunogenic than 2 doses of standard-dose quadrivalent influenza vaccine (SD-QIV). Herein, we present the immunogenicity and safety of influenza vaccination in a consecutive season post-HCT using the same dosing regimen.

Methods
A subcohort of study participants reenrolled and had hemagglutinin inhibition titers measured at baseline and 4 weeks after each vaccine dose in year 2. We estimated geometric mean fold rise in hemagglutinin inhibition titer from baseline for each group and used linear mixed effects models to estimate adjusted geometric mean ratios (comparing HD-TIV vs SD-QIV) for each antigen at each time point. We described systemic and injection site reactions.

Results
A total of 65 subcohort patients participated (33 SD-QIV, 32 HD-TIV). Postvaccine geometric mean fold rise and adjusted geometric mean ratio estimates were higher for both groups following a single influenza vaccine dose in year 2 as compared with 2 doses of the same formulation in year 1. Both groups had similar frequencies of injection site and systemic reactions.

Conclusions
A single dose of HD-TIV or SD-QIV was more immunogenic in year 2 than 2 doses of the same formulation in year 1. Reactogenicity was comparable between groups. One dose of influenza vaccine may be sufficient after a 2-dose schedule in the prior year post-HCT.

Clinical Trials Registration
NCT02860039 (ClinicalTrials.gov).
Early postmortem beef muscle proteome and metabolome variations due to supranutritional zinc and ractopamine hydrochloride supplementation
Authors: Schulte Matthew D , Hochmuth Katherine G , Steadham Edward M , Lonergan Steven M , Hansen Stephanie L , Huff-Lonergan Elisabeth 
Published: September 2024

Abstract
It was hypothesized that the longissimus thoracis (LT) muscle proteome, phosphoproteome, and metabolome could explain postmortem metabolism and tenderness differences in muscle from cattle supplemented zinc (Zn) and/or ractopamine hydrochloride (RH). High percentage Angus steers (N = 20) were fed in a 2 × 2 factorial assigned to Zn and RH treatments: control (CON; n = 10; analyzed 36 mg Zn/kg dry matter [DM]) or supranutritional Zn supplementation (SUPZN; n = 10; control diet + 60 mg Zn/kg DM [from ZnSO4] + 60 mg Zn/kg DM [from Zn–amino acid complex]) for the entire 89-d trial. During the 28 d before harvest, steers were blocked by body weight within Zn treatments to RH treatments of 0 (NO; n = 10) or 300 mg (RAC; n = 10) per steer per day. Steers were harvested at the Iowa State Meat Laboratory, where pH decline (1, 3, 6, and 24 h postmortem) was measured. At 24 h postmortem, LT muscle sections were removed from carcasses, and steaks were analyzed for Warner–Bratzler shear force (WBSF) values at 1, 3, 7, and 14 d postmortem. Muscle samples were taken at 1 h, 1, 3, 7, and 14 d postmortem for the following analysis: troponin-T degradation (1, 3, 7, and 14 d postmortem), myosin heavy chain analysis (1 h postmortem), sarcoplasmic proteome analysis through tandem mass tagging analysis (1 h and 1 d postmortem), metabolome analysis (1 h and 1 d postmortem), and phosphoproteome analysis (1 h postmortem). SUPZN-NO tended to have a lower (P = 0.06) pH at 6 h postmortem and a lower WBSF value (P = 0.06) at 1 d postmortem. CON-RAC had a higher (P = 0.04) pH at 6 h postmortem and WBSF value (P &lt; 0.01) at 1 d postmortem. A lower pH at 6 h postmortem and lower WBSF value at 1 d postmortem in the SUPZN-NO treatment was accompanied by more sorbitol and fructose at 1 d postmortem, and less myosin regulatory light chain 2 at 1 h postmortem, and less adenosine monophosphate deaminase 1 (AMPD1) at 1 d postmortem than all other treatments. A higher pH at 6 h postmortem and higher WBSF value at 1 d postmortem in CON-RAC and SUPZN-RAC was accompanied by more soluble structural proteins (troponin-T and myosin-7) at 1 h postmortem than CON-NO. At 1 h postmortem, CON-RAC had more glyceraldehyde-3-phosphate dehydrogenase than CON-NO or SUPZN-RAC. Differences in energy metabolism enzymes, metabolites, and structural proteins may affect ATP production, rigor development, and lactate buildup which may explain the differences in postmortem metabolism and tenderness development at 1 d postmortem.
Plant versus pollinator protection: balancing pest management against floral contamination for insecticide use in Midwestern US cucurbits
Authors: Hung Keng-Lou James , Ternest John J , Wood Thomas J , Ingwell Laura L , Bloom Elias H , Szendrei Zsofia , Kaplan Ian , Goodell Karen 
Published: September 2024

Abstract
Controlling crop pests while conserving pollinators is challenging, particularly when prophylactically applying broad-spectrum, systemic insecticides such as neonicotinoids. Systemic insecticides are often used in conventional agriculture in commercial settings, but the conditions that optimally balance pest management and pollination are poorly understood. We investigated how insecticide application strategies control pests and expose pollinators to insecticides with an observational study of cucurbit crops in the Midwestern United States. To define the window of protection and potential pollinator exposure resulting from alternative insecticide application strategies, we surveyed 62 farms cultivating cucumber, watermelon, or pumpkin across 2 yr. We evaluated insecticide regimes, abundance of striped and spotted cucumber beetles (Acalymma vittatum [Fabricius] and Diabrotica undecimpunctata Mannerheim), and insecticide residues in leaves, pollen, and nectar. We found that growers used neonicotinoids (thiamethoxam and imidacloprid) at planting in all cucumber and pumpkin and approximately half of watermelon farms. In cucumber, foliar thiamethoxam levels were orders of magnitude higher than the other crops, excluding nearly all beetles from fields. In watermelon and pumpkin, neonicotinoids applied at planting resulted in 4–8 wk of protection before beetle populations increased. Floral insecticide concentrations correlated strongly with foliar concentrations across all crops, resulting in high potential exposure to pollinators in cucumber and low-moderate exposure in pumpkin and watermelon. Thus, the highest-input insecticide regimes maintained cucumber beetles far below economic thresholds while also exposing pollinators to the highest pollen and nectar insecticide concentrations. In cucurbits, reducing pesticide inputs will likely better balance crop protection and pollination, reduce costs, and improve yields.
The Escherichia coli TolC efflux pump protein is immunogenic and elicits protective antibodies
Authors: Silva Thaynara O , Teixeira Bárbara A , Costa Leon V S , Barbosa Luiza S , do Nascimento Lucas C , Fanticelli João G C , Rotilho Caroline , Branco Rafael V C , Silva Lucas S , Ferreira Maria E , Costa Thais L , Monteiro Sanderson V , dos Santos Abreu Juliana , Rajsfus Bia F , Bulla Ana Carolina S , Carneiro Jordanna , Allonso Diego , Salgado Diamantino R , Echevarria-Lima Juliana , da Silva Manuela Leal , Moreira Lilian O , Olsen Priscilla C 
Published: September 2024

Abstract
Antimicrobial resistance is an increasing worldwide public health burden that threatens to make existent antimicrobials obsolete. An important mechanism of antimicrobial resistance is the overexpression of efflux pumps, which reduce the intracellular concentration of antimicrobials. TolC is the outer membrane protein of an efflux pump that has gained attention as a therapeutic target. Little is known about the immune response against TolC. Here, we evaluated the immune response against TolC from Escherichia coli. TolC in silico epitope prediction showed several residues that could bind to human antibodies, and we showed that human plasma presented higher titers of anti-TolC IgG and IgA, than IgM. E. coli recombinant TolC protein stimulated macrophages in vitro to produce nitric oxide, as well as interleukin-6 and tumor necrosis factor α, assessed by Griess assay and enzyme-linked immunosorbent assay, respectively. Immunization of mice with TolC intraperitoneally and an in vitro restimulation led to increased T cell proliferation and interferon γ production, evaluated by flow cytometry and enzyme-linked immunosorbent assay, respectively. TolC mouse immunization stimulated anti-TolC IgM and IgG production, with higher levels of IgG1 and IgG2, among the IgG subclasses. Anti-TolC murine antibodies could bind to live E. coli and increase bacterial uptake and elimination by macrophages in vitro. Intraperitoneal or intranasal, but not oral, immunizations with inactivated E. coli also led to anti-TolC antibody production. Finally, TolC immunization increased mouse survival rates to antimicrobial-sensitive or resistant E. coli infection. Our results showed that TolC is immunogenic, leading to the production of protective antibodies against E. coli, reinforcing its value as a therapeutic target.
Contribution of major histocompatibility complex class II immunostaining in distinguishing idiopathic inflammatory myopathy subgroups: A histopathological cohort study
Authors: Lessard Lola E R , Robert Marie , Fenouil Tanguy , Mounier Rémi , Landel Véréna , Carlesimo Marie , Hot Arnaud , Chazaud Bénédicte , Laumonier Thomas , Streichenberger Nathalie , Gallay Laure 
Published: September 2024

Abstract
Idiopathic inflammatory myopathies (IIM) are rare, acquired muscle diseases; their diagnosis of is based on clinical, serological, and histological criteria. MHC-I-positive immunostaining, although non-specific, is used as a marker for IIM diagnosis; however, the significance of major histocompatibility complex (MHC)-II immunostaining in IIM remains debated. We investigated patterns of MHC-II immunostaining in myofibers and capillaries in muscle biopsies from 103 patients with dermatomyositis ([DM], n = 31), inclusion body myositis ([IBM], n = 24), anti-synthetase syndrome ([ASyS], n = 10), immune-mediated necrotizing myopathy ([IMNM], n = 18), or overlap myositis ([OM], n = 20). MHC-II immunostaining of myofibers was abnormal in 63/103 of patients (61%) but the patterns differed according to the IIM subgroup. They were diffuse in IBM (96%), negative in IMNM (83%), perifascicular in ASyS (70%), negative (61%) or perifascicular (32%) in DM, and either clustered (40%), perifascicular (30%), or diffuse heterogeneous (15%) in OM. Capillary MHC-II immunostaining also identified quantitative (capillary dropout, n = 47/88, 53%) and qualitative abnormalities, that is, architectural abnormalities, including dilated and leaky capillaries, (n = 79/98, 81%) in all IIM subgroups. Thus, MHC-II myofiber expression patterns allow distinguishing among IIM subgroups. We suggest the addition of MHC-II immunostaining to routine histological panels for IIM diagnosis.