bluuebunny/crossref_metadata_2025_split huggingface dataset:
Flows along arch filaments observed in the GRIS ‘very fast spectroscopic mode’
Authors: Manrique S. J. González , Denker C. , Kuckein C. , Yabar A. Pastor , Collados M. , Verma M. , Balthasar H. , Diercke A. , Fischer C. E. , Gömöry P. , González N. Bello , Schlichenmaier R. , Armas M. Cubas , Berkefeld T. , Feller A. , Hoch S. , Hofmann A. , Lagg A. , Nicklas H. , Suárez D. Orozco , Schmidt D. , Schmidt W. , Sigwarth M. , Sobotka M. , Solanki S. K. , Soltau D. , Staude J. , Strassmeier K. G. , Volkmer R. , von der Lühe O. , Waldmann T. 
Published: September 2017

AbstractA new generation of solar instruments provides improved spectral, spatial, and temporal resolution, thus facilitating a better understanding of dynamic processes on the Sun. High-resolution observations often reveal multiple-component spectral line profiles, e.g., in the near-infrared He i 10830 Å triplet, which provides information about the chromospheric velocity and magnetic fine structure. We observed an emerging flux region, including two small pores and an arch filament system, on 2015 April 17 with the ‘very fast spectroscopic mode’ of the GREGOR Infrared Spectrograph (GRIS) situated at the 1.5-meter GREGOR solar telescope at Observatorio del Teide, Tenerife, Spain. We discuss this method of obtaining fast (one per minute) spectral scans of the solar surface and its potential to follow dynamic processes on the Sun. We demonstrate the performance of the ‘very fast spectroscopic mode’ by tracking chromospheric high-velocity features in the arch filament system.
Photospheric magnetic field of an eroded-by-solar-wind coronal mass ejection
Authors: Palacios J. , Cid C. , Saiz E. , Guerrero A. 
Published: September 2017

AbstractWe have investigated the case of a coronal mass ejection that was eroded by the fast wind of a coronal hole in the interplanetary medium. When a solar ejection takes place close to a coronal hole, the flux rope magnetic topology of the coronal mass ejection (CME) may become misshapen at 1 AU as a result of the interaction. Detailed analysis of this event reveals erosion of the interplanetary coronal mass ejection (ICME) magnetic field. In this communication, we study the photospheric magnetic roots of the coronal hole and the coronal mass ejection area with HMI/SDO magnetograms to define their magnetic characteristics.
Magnetic field line braiding in the solar atmosphere
Authors: Candelaresi S. , Pontin D. I. , Hornig G. 
Published: September 2017

AbstractUsing a magnetic carpet as model for the near surface solar magnetic field we study its effects on the propagation of energy injectected by photospheric footpoint motions. Such a magnetic carpet structure is topologically highly non-trivial and with its magnetic nulls exhibits qualitatively different behavior than simpler magnetic fields. We show that the presence of magnetic fields connecting back to the photosphere inhibits the propagation of energy into higher layers of the solar atmosphere, like the solar corona. By applying certain types of footpoint motions the magnetic field topology is is greatly reduced through magnetic field reconnection which facilitates the propagation of energy and disturbances from the photosphere.
Coronal Mass Ejections travel time
Authors: Braga Carlos Roberto , de Mendonça Rafael Rodrigues Souza , Dal Lago Alisson , Echer Ezequiel 
Published: September 2017

AbstractCoronal mass ejections (CMEs) are the main source of intense geomagnetic storms when they are earthward directed. Studying their travel time is a key-point to understand when the disturbance will be observed at Earth. In this work, we study the CME that originated the interplanetary disturbance observed on 2013/10/02. According to the observations, the CME that caused the interplanetary disturbance was ejected on 2013/09/29. We obtained the CME speed and estimate of the time of arrival at the Lagrangian Point L1 using the concept of expansion speed. We found that observed and estimated times of arrival of the shock differ between 2 and 23 hours depending on method used to estimate the radial speed.
Solar and stellar coronae and winds
Authors: Jardine Moira 
Published: September 2017

AbstractSolar-like stars influence their environments through their coronal emis- sion and winds. These processes are linked through the physics of the stellar magnetic field, whose strength and geometry has now been explored for a large number of stars through spectropolarimetric observations. We have now detected trends with mass and rotation rate in the distribution of magnetic energies in different geometries and on also different length scales. This has implications both for the dynamo processes that generate the fields and also for the dynamics and evolution of the coronae and winds. Modelling of the surface driving processes on stars of various masses and rotation rates has revealed tantalising clues about the dynamics of stellar coronae and their ejecta. These new observations have also prompted a resurgence in the modelling of stellar winds, which is now uncovering the range of different interplanetary conditions that exoplanets might experience as they evolve.
Coherent Synchrotron Radiation in Laboratory Accelerators and the Double-Spectral Feature in Solar Flares
Authors: Cruz Wellington , Szpigel Sérgio , Kaufmann Pierre , Raulin Jean-Pierre , Klopf Michael 
Published: September 2017

AbstractRecent observations of solar flares at high-frequencies have provided evidence of a new spectral component with fluxes increasing with frequency in the sub-THz to THz range. This new component occurs simultaneously but is separated from the well-known microwave spectral component that maximizes at frequencies of a few to tens of GHz. The aim of this work is to study in detail a mechanism recently suggested to describe the double-spectrum feature observed in solar flares based on the physical process known as microbunching instability, which occurs with high-energy electron beams in laboratory accelerators.
Modelling coronal electron density and temperature profiles of the Active Region NOAA 11855
Authors: Gómez J. M. Rodríguez , Vieira L. E. Antunes , Dal Lago A. , Palacios J. , Balmaceda L. A. , Stekel T. 
Published: September 2017

AbstractThe magnetic flux emergence can help understand the physical mechanism responsible for solar atmospheric phenomena. Emerging magnetic flux is frequently related to eruptive events, because when emerging they can reconnected with the ambient field and release magnetic energy. We will use a physic-based model to reconstruct the evolution of the solar emission based on the configuration of the photospheric magnetic field. The structure of the coronal magnetic field is estimated by employing force-free extrapolation NLFFF based on vector magnetic field products (SHARPS) observed by HMI instrument aboard SDO spacecraft from Sept. 29 (2013) to Oct. 07 (2013). The coronal plasma temperature and density are described and the emission is estimated using the CHIANTI atomic database 8.0. The performance of the our model is compared to the integrated emission from the AIA instrument aboard SDO spacecraft in the specific wavelengths 171Å and 304Å.
How to make the Sun look less like the Sun and more like a star?
Authors: Vidotto A. A. 
Published: September 2017

AbstractSynoptic maps of the vector magnetic field have routinely been made available from stellar observations and recently have started to be obtained for the solar photospheric field. Although solar magnetic maps show a multitude of details, stellar maps are limited to imaging large-scale fields only. In spite of their lower resolution, magnetic field imaging of solar-type stars allow us to put the Sun in a much more general context. However, direct comparison between stellar and solar magnetic maps are hampered by their dramatic differences in resolution. Here, I present the results of a method to filter out the small-scale component of vector fields, in such a way that comparison between solar and stellar (large-scale) magnetic field vector maps can be directly made. This approach extends the technique widely used to decompose the radial component of the solar magnetic field to the azimuthal and meridional components as well, and is entirely consistent with the description adopted in several stellar studies. This method can also be used to confront synoptic maps synthesised in numerical simulations of dynamo and magnetic flux transport studies to those derived from stellar observations.
Evidence of in-situ Type II radio bursts in interplanetary shocks
Authors: Díaz-Castillo S. M. , Oliveros J. C. Martínez , Calvo-Mozo B. 
Published: September 2017

AbstractWe present a database of 11 interplanetary shocks associated to coronal mass ejections (CMEs) observed by STEREO and Wind missions between 2006 and 2011 that show evidence of Type II radio burst. For all events, we calculated the principal characteristics of the shock driver, the intensity and geometrical configuration of the in-situ shock and checked for the existence of in-situ type II radio burst. We made a comparative analysis of two CME events (on 18 August 2010 and 4 June 2011), which are apparently associated to two or more magnetic structures which interact in space (i.e. CMEs, SIRs, CIRs). These events show varied shock configurations and intensities. We found evidence of in-situ type II radio bursts in one of the events studied, suggesting that the geometry of the shock (quasi-perpendicularity) is also critical for the generation and/or detection of radio emission in-situ.
CARMENES – M Dwarfs and their Planets: First Results
Authors: Quirrenbach A. , Amado P.J. , Ribas I. , Reiners A. , Caballero J.A. , Seifert W. , Zechmeister M. ,   the CARMENES Consortium
Published: September 2017

AbstractCARMENES is a pair of high-resolution (R ≳ 80, 000) spectrographs covering the wavelength range from 0.52 to 1.71 μm with only small gaps. The instrument has been optimized for precise radial velocity measurements. It was installed and commissioned at the 3.5 m telescope of the Calar Alto observatory in Southern Spain in 2015. The first large science program of CARMENES is a survey of ~300 M dwarfs, which started on Jan 1, 2016. We present an overview of the instrument, and provide a few examples of early science results.
Evolution of Long Term Variability in Solar Analogs
Authors: Egeland Ricky , Soon Willie , Baliunas Sallie , Hall Jeffrey C. , Henry Gregory W. 
Published: September 2017

AbstractEarth is the only planet known to harbor life, therefore we may speculate on how the nature of the Sun-Earth interaction is relevant to life on Earth, and how the behavior of other stars may influence the development of life on their planetary systems. We study the long-term variability of a sample of five solar analog stars using composite chromospheric activity records up to 50 years in length and synoptic visible-band photometry about 20 years long. This sample covers a large range of stellar ages which we use to represent the evolution in activity for solar mass stars. We find that young, fast rotators have an amplitude of variability many times that of the solar cycle, while old, slow rotators have very little variability. We discuss the possible impacts of this variability on young Earth and exoplanet climates.
Improved rotation-activity-age relations in Sun-like stars
Authors: Meléndez Jorge , Santos Leonardo A. dos , Freitas Fabrício C. 
Published: September 2017

AbstractThe evolution of rotational velocity and magnetic activity with age follows approximately at−1/2relation, the famous Skumanich law. Using a large sample of about 80 solar twins with precise ages, we show departures from this law. We found a steep drop in rotational velocity and activity in the first 2-3 Gyr and afterwards there seems to be a shallow decrease. Our inferred rotational periods suggest that the Sun will continue to slow down, validating thus the use of gyrochronology beyond solar age. The Sun displays normal rotational velocity and activity when compared to solar twins of solar age. We also show that stars with exceedingly high stellar activity for their age are spectroscopic binaries that also exhibit enhanced rotational velocities and chemical signatures of mass transfer.
High Energy Exoplanet Transits
Authors: Llama Joe , Shkolnik Evgenya L. 
Published: September 2017

AbstractX-ray and ultraviolet transits of exoplanets allow us to probe the atmospheres of these worlds. High energy transits have been shown to be deeper but also more variable than in the optical. By simulating exoplanet transits using high-energy observations of the Sun, we can test the limits of our ability to accurately measure the properties of these planets in the presence of stellar activity. We use both disk-resolved images of the Solar disk spanning soft X-rays, the ultraviolet, and the optical and also disk-integrated Sun-as-a-star observations of the Lyα irradiance to simulate transits over a wide wavelength range. We find that for stars with activity levels similar to the Sun, the planet-to-star radius ratio can be overestimated by up to 50% if the planet occults an active region at high energies. We also compare our simulations to high energy transits of WASP-12b, HD 189733, 55 Cnc b, and GJ 436b.
Stellar Midlife Crises: Challenges and Advances in Simulating Convection and Differential Rotation in Sun-like Stars
Authors: Nelson Nicholas J. , Payne Charles , Sorensen Cameron Michael 
Published: September 2017

AbstractLow mass, main sequence stars like our Sun exhibit a wide variety of rotational and magnetic states. Observational and theoretical advances have led to a renewed emphasis on understanding the rotational and magnetic evolution of sun-like stars has become a pressing problem in stellar physics. We use global 3D convection and convective dynamo simulations in rotating spherical shells and with realistic stellar stratification to explore the behavior of “middle-aged” stars. We show that for stars with slightly less rotational influence than our Sun a transition occurs from solar-like (fast equator, slow poles) to anti-solar (slow equator, fast poles) differential rotation. We investigate this transition using two different treatments for the upper boundary of our simulations and we hypothesize that this transition from solar-like to anti-solar differential rotation may be responsible for observations of anomalously rapid rotation for stars older than our Sun.
Excess labile carbon promotes the expression of virulence factors in coral reef bacterioplankton
Authors: Cárdenas Anny , Neave Matthew J , Haroon Mohamed Fauzi , Pogoreutz Claudia , Rädecker Nils , Wild Christian , Gärdes Astrid , Voolstra Christian R 
Published: September 2017

Abstract
Coastal pollution and algal cover are increasing on many coral reefs, resulting in higher dissolved organic carbon (DOC) concentrations. High DOC concentrations strongly affect microbial activity in reef waters and select for copiotrophic, often potentially virulent microbial populations. High DOC concentrations on coral reefs are also hypothesized to be a determinant for switching microbial lifestyles from commensal to pathogenic, thereby contributing to coral reef degradation, but evidence is missing. In this study, we conducted ex situ incubations to assess gene expression of planktonic microbial populations under elevated concentrations of naturally abundant monosaccharides (glucose, galactose, mannose, and xylose) in algal exudates and sewage inflows. We assembled 27 near-complete (&gt;70%) microbial genomes through metagenomic sequencing and determined associated expression patterns through metatranscriptomic sequencing. Differential gene expression analysis revealed a shift in the central carbohydrate metabolism and the induction of metalloproteases, siderophores, and toxins in Alteromonas, Erythrobacter, Oceanicola, and Alcanivorax populations. Sugar-specific induction of virulence factors suggests a mechanistic link for the switch from a commensal to a pathogenic lifestyle, particularly relevant during increased algal cover and human-derived pollution on coral reefs. Although an explicit test remains to be performed, our data support the hypothesis that increased availability of specific sugars changes net microbial community activity in ways that increase the emergence and abundance of opportunistic pathogens, potentially contributing to coral reef degradation.
DNA-SIP based genome-centric metagenomics identifies key long-chain fatty acid-degrading populations in anaerobic digesters with different feeding frequencies
Authors: Ziels Ryan M , Sousa Diana Z , Stensel H David , Beck David A C 
Published: September 2017

Abstract
Fats, oils and greases (FOG) are energy-dense wastes that can be added to anaerobic digesters to substantially increase biomethane recovery via their conversion through long-chain fatty acids (LCFAs). However, a better understanding of the ecophysiology of syntrophic LCFA-degrading microbial communities in anaerobic digesters is needed to develop operating strategies that mitigate inhibitory LCFA accumulation from FOG. In this research, DNA stable isotope probing (SIP) was coupled with metagenomic sequencing for a genome-centric comparison of oleate (C18:1)-degrading populations in two anaerobic codigesters operated with either a pulse feeding or continuous-feeding strategy. The pulse-fed codigester microcosms converted oleate into methane at over 20% higher rates than the continuous-fed codigester microcosms. Differential coverage binning was demonstrated for the first time to recover population genome bins (GBs) from DNA-SIP metagenomes. About 70% of the 13C-enriched GBs were taxonomically assigned to the Syntrophomonas genus, thus substantiating the importance of Syntrophomonas species to LCFA degradation in anaerobic digesters. Phylogenetic comparisons of 13C-enriched GBs showed that phylogenetically distinct Syntrophomonas GBs were unique to each codigester. Overall, these results suggest that syntrophic populations in anaerobic digesters can have different adaptive capacities, and that selection for divergent populations may be achieved by adjusting reactor operating conditions to maximize biomethane recovery.
Organocatalytic synthesis of chiral tetrasubstituted allenes from racemic propargylic alcohols
Authors: Qian Deyun , Wu LinLin , Lin Zhenyang , Sun Jianwei 
Published: September 2017

AbstractAlthough chiral allene preparation via formal SN2’ nucleophilic substitutions of enantioenriched propargylic derivatives or metal-catalyzed reactions of racemic propargylic derivatives has attracted considerable attention and found applications in many areas of research, direct use of propargylic alcohols instead of propargylic derivatives for catalytic asymmetric allene synthesis is unknown. Here, we show that a highly enantioselective synthesis of tetrasubstituted allenes from racemic propargylic alcohols has been realized by organocatalysis with good efficiency (up to 96% yield and 97% ee). The intermolecular C–C and C–S bond formation was achieved efficiently with simultaneous stereocontrol over the axial chirality. Furthermore, an adjacent quaternary stereocenter could also be constructed. Mechanistically, the reaction may involve efficient stereocontrol on the propargylic cation by its chiral counter anion or 1,8-conjugate addition of para-quinone methides. In sharp contrast to previous central chirality construction, this process employs quinone methides for axial chirality construction.
Distinguishing faceted oxide nanocrystals with 17O solid-state NMR spectroscopy
Authors: Li Yuhong , Wu Xin-Ping , Jiang Ningxin , Lin Ming , Shen Li , Sun Haicheng , Wang Yongzheng , Wang Meng , Ke Xiaokang , Yu Zhiwu , Gao Fei , Dong Lin , Guo Xuefeng , Hou Wenhua , Ding Weiping , Gong Xue-Qing , Grey Clare P. , Peng Luming 
Published: September 2017

AbstractFacet engineering of oxide nanocrystals represents a powerful method for generating diverse properties for practical and innovative applications. Therefore, it is crucial to determine the nature of the exposed facets of oxides in order to develop the facet/morphology–property relationships and rationally design nanostructures with desired properties. Despite the extensive applications of electron microscopy for visualizing the facet structure of nanocrystals, the volumes sampled by such techniques are very small and may not be representative of the whole sample. Here, we develop a convenient 17O nuclear magnetic resonance (NMR) strategy to distinguish oxide nanocrystals exposing different facets. In combination with density functional theory calculations, we show that the oxygen ions on the exposed (001) and (101) facets of anatase titania nanocrystals have distinct 17O NMR shifts, which are sensitive to surface reconstruction and the nature of the steps on the surface. The results presented here open up methods for characterizing faceted nanocrystalline oxides and related materials.
Ecological strategies and metabolic trade-offs of complex environmental biofilms
Authors: Niederdorfer Robert , Besemer Katharina , Battin Tom J. , Peter Hannes 
Published: September 2017

AbstractMicroorganisms aggregated into matrix-enclosed biofilms dominate microbial life in most natural, engineered, and medical systems. Despite this, the ecological adaptations and metabolic trade-offs of the formation of complex biofilms are currently poorly understood. Here, exploring the dynamics of bacterial ribosomal RNA operon (rrn) copy numbers, we unravel the genomic underpinning of the formation and success of stream biofilms that contain hundreds of bacterial taxa. Experimenting with stream biofilms, we found that nascent biofilms in eutrophic systems had reduced lag phases and higher growth rates, and more taxa with higher rrn copy number than biofilms from oligotrophic systems. Based on these growth-related traits, our findings suggest that biofilm succession was dominated by slow-but-efficient bacteria likely with leaky functions, such as the production of extracellular polymeric substances at the cost of rapid growth. Expanding our experimental findings to biofilms from 140 streams, we found that rrn copy number distribution reflects functional trait allocation and ecological strategies of biofilms to be able to thrive in fluctuating environments. These findings suggest that alternative trade-offs dominating over rate-yield trade-offs contribute to the evolutionary success of stream biofilms.