bluuebunny/crossref_metadata_2025_split huggingface dataset:
Comparison of Continuous Glucose Monitoring between Dexcom G4 Platinum and HD-XG Systems in Nonhuman Primates (Macaca Fascicularis)
Authors: Wang Bingdi , Qiao Wei , Ye Weiwei , Wang Xiaoli , Liu Yongqiang , Wang Yixin , Xiao Yong-Fu 
Published: August 2017

AbstractTimely knowing glucose level helps diabetic patients to manage the disease, including decisions about food, physical activity and medication. This study compared two continuous glucose monitoring systems in conscious and moving-free nonhuman primates (NHPs,Macaca fascicularis). Each normoglycemic or diabetic monkey was implanted with one Dexcom G4 Platinum subcutaneously or one HD-XG glucose sensor arterially for glucose monitoring. The glucose levels measured by both telemetry devices significantly correlated with the glucometer readings. The data of oral glucose tolerance test (oGTT) showed that the glucose levels measured by either Dexcom G4 Platinum or HD-XG transmitter were very similar to glucometer readings. However, compared to HD-XG transmitter or glucometer, Dexcom G4 Platinum detected a decreased glucose peak of ivGTT with approximately 10 min delay due to interstitial glucose far behind blood glucose change. Our data showed the advantages of the telemetry systems are: (1) consecutive data collection (day and night); (2) no bleeding; (3) no anesthesia (moving freely); (4) recording natural response without physical restriction and stress; (5) less labor intensity during ivGTT and other tests; (6) quick outcomes without lab tests. This article summarized and compared the differences of the general characteristics of two continuous glucose monitoring systems in diabetic research.
Super-Resolved Nuclear Magnetic Resonance Spectroscopy
Authors: Mulleti Satish , Singh Amrinder , Brahmkhatri Varsha P. , Chandra Kousik , Raza Tahseen , Mukherjee Sulakshana P. , Seelamantula Chandra Sekhar , Atreya Hanudatta S. 
Published: August 2017

AbstractWe present a novel method that breaks the resolution barrier in nuclear magnetic resonance (NMR) spectroscopy, allowing one to accurately estimate the chemical shift values of highly overlapping or broadened peaks. This problem is routinely encountered in NMR when peaks have large linewidths due to rapidly decaying signals, hindering its application. We address this problem based on the notion of finite-rate-of-innovation (FRI) sampling, which is based on the premise that signals such as the NMR signal, can be accurately reconstructed using fewer measurements than that required by existing approaches. The FRI approach leads to super-resolution, beyond the limits of contemporary NMR techniques. Using this method, we could measure for the first time small changes in chemical shifts during the formation of a Gold nanorod-protein complex, facilitating the quantification of the strength of such interactions. The method thus opens up new possibilities for the application and acceleration of multidimensional NMR spectroscopy across a wide range of systems.
Klein tunneling near the Dirac points in metal-dielectric multilayer metamaterials
Authors: Sun Lei , Gao Jie , Yang Xiaodong 
Published: August 2017

AbstractThe Klein tunneling of optical waves near the Dirac points in the metal-dielectric multilayer metamaterials is theoretically investigated and demonstrated through the coupled-mode theory under the tight-binding approximation and the rigorous band structure analysis based on the transfer-matrix method. The optical analogue of Klein tunneling for the relativistic electrons passing across a potential barrier is revealed by the iso-frequency contour analysis and numerical simulation to describe the optical beam propagation and refraction across the interface of two metal-dielectric multilayer metamaterial stacks. The transmission and reflection spectra of the Klein tunneling of optical waves are also explained by the coupled mode theory.
Comparative RNA-Seq Analysis Uncovers a Complex Regulatory Network for Soybean Cyst Nematode Resistance in Wild Soybean (Glycine soja)
Authors: Zhang Hengyou , Kjemtrup-Lovelace Susanne , Li Changbao , Luo Yan , Chen Lars P. , Song Bao-Hua 
Published: August 2017

AbstractSoybean cyst nematode (SCN) is the most damaging pest of soybean worldwide. The molecular mechanism of SCN resistance remains largely unknown. We conducted a global RNA-seq comparison between a resistant genotype (S54) and a susceptible genotype (S67) of Glycine soja, the wild progenitor of soybean, to understand its regulatory network in SCN defense. The number of differentially expressed genes (DEGs) in S54 (2,290) was much larger than that in S67 (555). A number of defense-related genes/pathways were significantly induced only in S54, while photosynthesis and several metabolic pathways were affected in both genotypes with SCN infection. These defense-associated DEGs were involved in pathogen recognition, calcium/calmodulin-mediated defense signaling, jasmonic acid (JA)/ethylene (ET) and sialic acid (SA)-involved signaling, the MAPK signaling cascade, and WRKY-involved transcriptional regulation. Our results revealed a comprehensive regulatory network involved in SCN resistance and provided insights into the complex molecular mechanisms of SCN resistance in wild soybean.
Elastin is Localised to the Interfascicular Matrix of Energy Storing Tendons and Becomes Increasingly Disorganised With Ageing
Authors: Godinho Marta S. C. , Thorpe Chavaunne T. , Greenwald Steve E. , Screen Hazel R. C. 
Published: August 2017

AbstractTendon is composed of fascicles bound together by the interfascicular matrix (IFM). Energy storing tendons are more elastic and extensible than positional tendons; behaviour provided by specialisation of the IFM to enable repeated interfascicular sliding and recoil. With ageing, the IFM becomes stiffer and less fatigue resistant, potentially explaining why older tendons become more injury-prone. Recent data indicates enrichment of elastin within the IFM, but this has yet to be quantified. We hypothesised that elastin is more prevalent in energy storing than positional tendons, and is mainly localised to the IFM. Further, we hypothesised that elastin becomes disorganised and fragmented, and decreases in amount with ageing, especially in energy storing tendons. Biochemical analyses and immunohistochemical techniques were used to determine elastin content and organisation, in young and old equine energy storing and positional tendons. Supporting the hypothesis, elastin localises to the IFM of energy storing tendons, reducing in quantity and becoming more disorganised with ageing. These changes may contribute to the increased injury risk in aged energy storing tendons. Full understanding of the processes leading to loss of elastin and its disorganisation with ageing may aid in the development of treatments to prevent age related tendinopathy.
Plasmodium vivax ligand-receptor interaction: PvAMA-1 domain I contains the minimal regions for specific interaction with CD71+ reticulocytes
Authors: Arévalo-Pinzón Gabriela , Bermúdez Maritza , Hernández Diana , Curtidor Hernando , Patarroyo Manuel Alfonso 
Published: August 2017

AbstractThe malarial parasite’s invasion is complex, active and coordinated, involving many low and high affinity interactions with receptors on target cell membrane. Proteomics analysis has described around 40 proteins in P. vivax which could be involved in reticulocyte invasion; few have been studied with the aim of elucidating how many of them establish specific interactions with their respective host cells. Given the importance of knowing which of the parasite’s protein regions are functionally important for invasion, minimum regions mediating specific interaction between Plasmodium vivax apical membrane antigen 1 (PvAMA-1) and its host cell were here elucidated. The region covering PvAMA-1 domains I and II (PvAMA-DI-II) specifically bound to the CD71+ red blood cell subpopulation. A 20 residue-long region (81EVENAKYRIPAGRCPVFGKG100) located in domain I was capable of inhibiting PvAMA-DI-II recombinant protein binding to young reticulocytes (CD71+CD45−) and rosette formation. This conserved peptide specifically interacted with high affinity with reticulocytes (CD71+) through a neuraminidase- and chymotrypsin-treatment sensitive receptor. Such results showed that, despite AMA-1 having universal functions during late Plasmodium invasion stages, PvAMA-1 had reticulocyte-preferring binding regions, suggesting that P. vivax target cell selection is not just restricted to initial interactions but maintained throughout the erythrocyte invasion cycle, having important implications for designing a specific anti-P. vivax vaccine.
Conditions for Barrel and Clam-Shell Liquid Drops to Move on Bio-inspired Conical Wires
Authors: Luo Cheng , Wang Xiang 
Published: August 2017

AbstractIt has been reported that, in a foggy environment, water drops with either barrel or clam-shell shapes are capable of self-running on conical wire-like structures, such as cactus spines, spider silk, and water striders’ legs. On the other hand, the corresponding moving mechanisms are still not quite understood. For instance, it is unclear under what conditions clam-shell drops would move from the tip towards the root on a conical wire. In this work, based on the balance of forces, we derive conditions for a drop to self-transport towards or away from the root. We find that, although barrel and clam-shell drops have different shapes, these conditions are applicable to both of them, which thus provide good guidelines for developing artificial fog collectors. Furthermore, based on the derived conditions, we interpret drop movements on both hydrophilic and hydrophobic wires, with the support of experimental results on cactus spines. Finally, our results indicate that not all the cacti are able to harvest water from fog.
Occurrence of Corynebacterium striatum as an emerging antibiotic-resistant nosocomial pathogen in a Tunisian hospital
Authors: Alibi Sana , Ferjani Asma , Boukadida Jalel , Cano María Eliecer , Fernández-Martínez Marta , Martínez-Martínez Luis , Navas Jesús 
Published: August 2017

AbstractCorynebacterium striatum is a nosocomial opportunistic pathogen increasingly associated with a wide range of human infections and is often resistant to several antibiotics. We investigated the susceptibility of 63 C. striatum isolated at the Farhat-Hached hospital, Sousse (Tunisia), during the period 2011–2014, to a panel of 16 compounds belonging to the main clinically relevant classes of antimicrobial agents. All strains were susceptible to vancomycin, linezolid, and daptomycin. Amikacin and gentamicin also showed good activity (MICs90 = 1 and 2 mg/L, respectively). High rates of resistance to penicillin (82.5%), clindamycin (79.4%), cefotaxime (60.3%), erythromycin (47.6%), ciprofloxacin (36.5%), moxifloxacin (34.9%), and rifampicin (25.4%) were observed. Fifty-nine (93.7%) out of the 63 isolates showed resistance to at least one compound and 31 (49.2%) were multidrug-resistant. Twenty-nine resistance profiles were distinguished among the 59 resistant C. striatum. Most of the strains resistant to fluoroquinolones showed a double mutation leading to an amino acid change in positions 87 and 91 in the quinolone resistance-determining region of the gyrA gene. The 52 strains resistant to penicillin were positive for the gene bla, encoding a class A β-lactamase. Twenty-two PFGE patterns were identified among the 63 C. striatum, indicating that some clones have spread within the hospital.
Laser-assisted Rapid Mineralization of Human Tooth Enamel
Authors: Sun Muyang , Wu Nier , Chen Haifeng 
Published: August 2017

AbstractThe human body has difficulty repairing damaged dental enamel, an acellular hard tissue. Researchers have sought feasible biomimicry strategies to repair enamel defects; however, few have been successfully translated to clinical applications. In this study, we propose a new method for achieving rapid enamel mineralization under a near-physiological environment. Through treatment with a laser and chelating agents, 15 μm crystals could be grown compactly on an enamel substrate in less than 20 min. The compact crystal layer had similar structure as native enamel prisms and high elastic modulus. This layer also had the potential for further remineralization in saliva. The benefit of using laser can not only speed up the mineralization, but also control the crystal growth precisely where in need. A mechanism for how laser and chelating agents synergistically function is also proposed. This strategy offers a possibility for enamel-biomimicking repair in dental clinics.
Interaction of lipopolysaccharides at intermolecular sites of the periplasmic Lpt transport assembly
Authors: Laguri Cedric , Sperandeo Paola , Pounot Kevin , Ayala Isabel , Silipo Alba , Bougault Catherine M. , Molinaro Antonio , Polissi Alessandra , Simorre Jean-Pierre 
Published: August 2017

AbstractTransport of lipopolysaccharides (LPS) to the surface of the outer membrane is essential for viability of Gram-negative bacteria. Periplasmic LptC and LptA proteins of the LPS transport system (Lpt) are responsible for LPS transfer between the Lpt inner and outer membrane complexes. Here, using a monomeric E. coli LptA mutant, we first show in vivo that a stable LptA oligomeric form is not strictly essential for bacteria. The LptC-LptA complex was characterized by a combination of SAXS and NMR methods and a low resolution model of the complex was determined. We were then able to observe interaction of LPS with LptC, the monomeric LptA mutant as well as with the LptC-LptA complex. A LptC-LPS complex was built based on NMR data in which the lipid moiety of the LPS is buried at the interface of the two β-jellyrolls of the LptC dimer. The selectivity of LPS for this intermolecular surface and the observation of such cavities at homo- or heteromolecular interfaces in LptC and LptA suggests that intermolecular sites are essential for binding LPS during its transport.
Purification of Dye-stuff Contained Wastewater by a Hybrid Adsorption-Periphyton Reactor (HAPR): Performance and Mechanisms
Authors: Feng Yanfang , Xue Lihong , Duan Jingjing , Dionysiou Dionysios D. , Chen Yudong , Yang Linzhang , Guo Zhi 
Published: August 2017

AbstractsThe aim of this study was to develop an environmental-benign bio-measure that could be used to purify dye-contaminated wastewater. Herein, a hybrid adsorption-periphyton reactor (HAPR), combining a bioadsorbent based adsorption unit and a periphyton-based photo-bioreactor (PPBR), was built and applied for the first time. Firstly, an efficient bioadsorbent, i.e, microwave-activated swede rape hull (MSRH), was produced, characterized and applied in an adsorption column, to pretreat methylene blue (MB) wastewater with high concentration (~100 mg L−1 or higher). Thereafter, the effluent of adsorption column, with lower dye concentration (~0.5 mg L−1), was collected and further purified by PPBR. Results showed that dye removal efficiency by HAPR was 99.95% (from 200 mg L−1 to 0.1 mg L−1 or lower). Decolorization mechanisms by PPBR, included adsorption process by extracellular polymeric substances (EPS) on the surface of periphyton and degradation process. The study showed that HAPR was a novel, environmental friendly, efficient and promising dye-purification method and deserved further attention in future investigation.
A rare genetic variant of BPIFB4 predisposes to high blood pressure via impairment of nitric oxide signaling
Authors: Vecchione Carmine , Villa Francesco , Carrizzo Albino , Spinelli Chiara Carmela , Damato Antonio , Ambrosio Mariateresa , Ferrario Anna , Madonna Michele , Uccellatore Annachiara , Lupini Silvia , Maciag Anna , Ryskalin Larisa , Milanesi Luciano , Frati Giacomo , Sciarretta Sebastiano , Bellazzi Riccardo , Genovese Stefano , Ceriello Antonio , Auricchio Alberto , Malovini Alberto , Puca Annibale Alessandro 
Published: August 2017

AbstractBPIFB4 is associated with exceptional longevity: four single-nucleotide polymorphisms distinguish the wild-type form from a longevity-associated variant conferring positive effects on blood pressure. The effect of a rare variant (RV; allele frequency, 4%) on blood pressure is unknown. Here, we show that overexpression of RV-BPIFB4 in ex-vivo mouse vessels impairs phosphorylation of endothelial nitric oxide synthase (eNOS), blunting acetylcholine-evoked vasorelaxation; in vivo, virally mediated overexpression of RV-BPIFB4 increases blood pressure, an action absent in eNOS-deficient mice. In humans, we found RV carriers to have increased diastolic blood pressure, a finding that was more marked in subjects on anti-hypertensive medication; moreover, recombinant RV-BPIFB4 protein impaired eNOS function in ex-vivo human vessels. Thus, RV-BPIFB4 acts directly on blood pressure homeostasis and may represent a novel biomarker of vascular dysfunction and hypertension.
The naphthalene catabolic protein NahG plays a key role in hexavalent chromium reduction in Pseudomonas brassicacearum LZ-4
Authors: Huang Haiying , Tao Xuanyu , Jiang Yiming , Khan Aman , Wu Qi , Yu Xuan , Wu Dan , Chen Yong , Ling Zhenmin , Liu Pu , Li Xiangkai 
Published: August 2017

AbstractSoil contamination by PAH and heavy metals is a growing problem. Here, we showed that a new isolate, Pseudomonas brassicacearum strain LZ-4, can simultaneously degrade 98% of 6 mM naphthalene and reduce 92.4% of 500 μM hexavalent chromium [Cr (VI)] within 68 h. A draft genome sequence of strain LZ-4 (6,219,082 bp) revealed all the genes in the naphthalene catabolic pathway and some known Cr (VI) reductases. Interestingly, genes encoding naphthalene pathway components were upregulated in the presence of Cr (VI), and Cr (VI) reduction was elevated in the presence of naphthalene. We cloned and expressed these naphthalene catabolic genes and tested for Cr (VI) reduction, and found that NahG reduced 79% of 100 μM Cr (VI) in 5 minutes. Additionally, an nahG deletion mutant lost 52% of its Cr (VI) reduction ability compared to that of the wild-type strain. As nahG encodes a salicylate hydroxylase with flavin adenine dinucleotide (FAD) as a cofactor for electron transfer, Cr (VI) could obtain electrons from NADH through NahG-associated FAD. To the best of our knowledge, this is the first report of a protein involved in a PAH-degradation pathway that can reduce heavy metals, which provides new insights into heavy metal-PAH contamination remediation.
Creating the Functional Single-Ring GroEL-GroES Chaperonin Systems via Modulating GroEL-GroES Interaction
Authors: Illingworth Melissa , Ellis Holly , Chen Lingling 
Published: August 2017

AbstractChaperonin and cochaperonin, represented by E. coli GroEL and GroES, are essential molecular chaperones for protein folding. The double-ring assembly of GroEL is required to function with GroES, and a single-ring GroEL variant GroELSR forms a stable complex with GroES, arresting the chaperoning reaction cycle. GroES I25 interacts with GroEL; however, mutations of I25 abolish GroES-GroEL interaction due to the seven-fold mutational amplification in heptameric GroES. To weaken GroELSR-GroES interaction in a controlled manner, we used groES7, a gene linking seven copies of groES, to incorporate I25 mutations in selected GroES modules in GroES7. We generated GroES7 variants with different numbers of GroESI25A or GroESI25D modules and different arrangements of the mutated modules, and biochemically characterized their interactions with GroELSR. GroES7 variants with two mutated modules participated in GroELSR–mediated protein folding in vitro. GroES7 variants with two or three mutated modules collaborated with GroELSR to perform chaperone function in vivo: three GroES7 variants functioned with GroELSR under both normal and heat-shock conditions. Our studies on functional single-ring bacterial chaperonin systems are informative to the single-ring human mitochondrial chaperonin mtHsp60-mtHsp10, and will provide insights into how the double-ring bacterial system has evolved to the single-ring mtHsp60-mtHsp10.
Global distribution of clay-size minerals on land surface for biogeochemical and climatological studies
Authors: Ito Akihiko , Wagai Rota 
Published: August 2017

AbstractClay-size minerals play important roles in terrestrial biogeochemistry and atmospheric physics, but their data have been only partially compiled at global scale. We present a global dataset of clay-size minerals in the topsoil and subsoil at different spatial resolutions. The data of soil clay and its mineralogical composition were gathered through a literature survey and aggregated by soil orders of the Soil Taxonomy for each of the ten groups: gibbsite, kaolinite, illite/mica, smectite, vermiculite, chlorite, iron oxide, quartz, non-crystalline, and others. Using a global soil map, a global dataset of soil clay-size mineral distribution was developed at resolutions of 2' to 2° grid cells. The data uncertainty associated with data variability and assumption was evaluated using a Monte Carlo method, and validity of the clay-size mineral distribution obtained in this study was examined by comparing with other datasets. The global soil clay data offer spatially explicit studies on terrestrial biogeochemical cycles, dust emission to the atmosphere, and other interdisciplinary earth sciences.
A first-principles study of anionic (S) and cationic (V/Nb) doped Sr2Ta2O7 for visible light photocatalysis
Authors: Peng Yuman , Ma Zuju , Hu Junjie , Wu Kechen 
Published: August 2017

In order to utilize the visible light to catalyze water, UV-active Sr2Ta2O7 is engineered via co-doping of S and V/Nb to shift the valence band maximum upward and conduction band minimum downward by approximately 1 eV, respectively.
Highly Strained para-Phenylene-Bridged Macrocycles from Unstrained 1,4-Diketo Macrocycles
Authors: Merner Bradley , Mitra Nirmal , Merryman Caroline 
Published: August 2017

The conversion of macrocyclic 1,4-diketones to highly strained para-phenylene rings has recently been reported by our laboratory. This synthetic strategy represents a non-cross-coupling-based approach to arene-bridged macrocycles, and an alternative to palladium- and nickel-mediated processes. In this Synpacts article we discuss the development of endgame aromatization protocols for the synthesis of increasingly strained arene systems, as well as potential advantages of the macrocyclic 1,4-diketone approach to selectively functionalized benzenoid macrocycles for future complexity building reactions.1	Introduction2	A Non-Cross-Coupling-Based Approach to Arene-Bridged Macro	cycles3	Macrocyclic 1,4-Diketones: Streamlined Synthesis and Size-­Dependent Diastereoselective Grignard Reactions4	Dehydrative Aromatization Reactions: A Powerful Tool for Synthesizing Highly Strained para-Phenylene Units5	Conclusion