bluuebunny/crossref_metadata_2025_split huggingface dataset:
Sex-Dependent Effects of Caloric Restriction on the Ageing of an Ambush Feeding Copepod
Authors: Saiz Enric , Calbet Albert , Griffell Kaiene 
Published: September 2017

AbstractPlanktonic copepods are a very successful group in marine pelagic environments, with a key role in biogeochemical cycles. Among them, the genus Oithona is one of the more abundant and ubiquitous. We report here on the effects of caloric (food) restriction on the ageing patterns of the copepod Oithona davisae. The response of O. davisae to caloric restriction was sex dependent: under food limitation, females have lower age-specific mortality rates and longer lifespans and reproductive periods; male mortality rates and life expectancy were not affected. Males are more active swimmers than females, and given their higher energetic demands presumably generate reactive oxygen species at higher rates. That was confirmed by starvation experiments, which showed that O. davisae males burn through body reserves much faster, resulting in shorter life expectancy. Compared with common, coastal calanoid copepods, the effects of caloric restriction on O. davisae appeared less prominent. We think this difference in the magnitude of the responses is a consequence of the distinct life-history traits associated with the genus Oithona (ambush feeder, egg-carrier), with much lower overall levels of metabolism and reproductive effort.
Adenosine A2A receptor mediates hypnotic effects of ethanol in mice
Authors: Fang Teng , Dong Hui , Xu Xin-Hong , Yuan Xiang-Shan , Chen Ze-Ka , Chen Jiang-Fan , Qu Wei-Min , Huang Zhi-Li 
Published: September 2017

AbstractEthanol has extensive effects on sleep and daytime alertness, causing premature disability and death. Adenosine, as a potent sleep-promoting substance, is involved in many cellular and behavioral responses to ethanol. However, the mechanisms of hypnotic effects of ethanol remain unclear. In this study, we investigated the role of adenosine in ethanol-induced sleep using C57BL/6Slac mice, adenosine A2A receptor (A2AR) knockout mice, and their wild-type littermates. The results showed that intraperitoneal injection of ethanol (3.0 g/kg) at 21:00 decreased the latency to non-rapid eye movement (NREM) sleep and increased the duration of NREM sleep for 5 h. Ethanol dose-dependently increased NREM sleep, which was consistent with decreases in wakefulness in C57BL/6Slac mice compared with their own control. Caffeine (5, 10, or 15 mg/kg), a nonspecific adenosine receptor antagonist, dose-dependently and at high doses completely blocked ethanol-induced NREM sleep when administered 30 min prior to (but not after) ethanol injection. Moreover, ethanol-induced NREM sleep was completely abolished in A2AR knockout mice compared with wild-type mice. These findings strongly indicate that A2AR is a key receptor for the hypnotic effects of ethanol, and pretreatment of caffeine might be a strategy to counter the hypnotic effects of ethanol.
Greenhouse and field evaluation of isoxaflutole for weed control in maize in China
Authors: Zhao Ning , Zuo Lan , Li Wei , Guo Wenlei , Liu Weitang , Wang Jinxin 
Published: September 2017

AbstractGreenhouse and field studies were conducted to provide a reference for pre-emergence (PRE) application of isoxaflutole on maize in China. In greenhouse study, the isoxaflutole PRE application at 30 g active ingredient (a.i.) ha−1 could effectively control large numbers of weeds, especially some large-seeded broadleaves, tested in this study. The tolerance results indicated 21 maize hybrids showed different responses to isoxaflutole under greenhouse conditions. In 2015 and 2016, field experiments were conducted to determine and compare the weed control efficacy and safety to Zhengdan 958 maize with 6 herbicide treatments. In both years, isoxaflutole PRE at 100 to 250 g a.i. ha−1 was sufficient to provide satisfactory full-season control of the dominant common broadleaf and grass weeds in the field. Temporary injury to maize was observed with isoxaflutole treatments of 125, 150, and 250 g a.i. ha−1 in both years, but plants recovered within 4 to 6 wk. To maximize maize yield and provide satisfactory weed control, a range of 100 to 150 g a.i. ha−1 of isoxaflutole is recommended, depending on the soil characteristics, weather, and weed species present at the experimental site. Based on the results, isoxaflutole PRE has good potential for weed control in maize in China.
The innate immune cell response to bacterial infection in larval zebrafish is light-regulated
Authors: Du Lucia Y. , Darroch Hannah , Keerthisinghe Pramuk , Ashimbayeva Elina , Astin Jonathan W. , Crosier Kathryn E. , Crosier Philip S. , Warman Guy , Cheeseman James , Hall Christopher J. 
Published: September 2017

AbstractThe circadian clock, which evolved to help organisms harmonize physiological responses to external conditions (such as the light/dark cycle, LD), is emerging as an important regulator of the immune response to infection. Gaining a complete understanding of how the circadian clock influences the immune cell response requires animal models that permit direct observation of these processes within an intact host. Here, we investigated the use of larval zebrafish, a powerful live imaging system, as a new model to study the impact of a fundamental zeitgeber, light, on the innate immune cell response to infection. Larvae infected during the light phase of the LD cycle and in constant light condition (LL) demonstrated enhanced survival and bacterial clearance when compared with larvae infected during the dark phase of the LD cycle and in constant dark condition (DD). This increased survival was associated with elevated expression of the zebrafish orthologues of the mammalian pro-inflammatory cytokine genes, Tumour necrosis factor-α, Interleukin-8 and Interferon-γ, and increased neutrophil and macrophage recruitment. This study demonstrates for the first time that the larval zebrafish innate immune response to infection is enhanced during light exposure, suggesting that, similar to mammalian systems, the larval zebrafish response to infection is light-regulated.
Sulforaphane exerts anti-angiogenesis effects against hepatocellular carcinoma through inhibition of STAT3/HIF-1α/VEGF signalling
Authors: Liu Peng , Atkinson Samuel J. , Akbareian Sophia E. , Zhou Zhigang , Munsterberg Andrea , Robinson Stephen D. , Bao Yongping 
Published: September 2017

AbstractAngiogenesis plays an important role in hepatocellular carcinoma (HCC), the inhibition of which is explored for cancer prevention and treatment. The dietary phytochemical sulforaphane (SFN) is known for its anti-cancer properties in vitro and in vivo; but until now, no study has focused on the role of SFN in HCC tumor angiogenesis. In the present study, in vitro cell models using a HCC cell line, HepG2, and human endothelial cells, HUVECs, as well as ex vivo and in vivo models have been used to investigate the anti-tumor and anti-angiogenic effect of SFN. The results showed that SFN decreased HUVEC cell viability, migration and tube formation, all of which are important steps in angiogenesis. More importantly, SFN markedly supressed HepG2-stimulated HUVEC migration, adhesion and tube formation; which may be due to its inhibition on STAT3/HIF-1α/VEGF signalling in HepG2 cells. In addition, SFN significantly reduced HepG2 tumor growth in a modified chick embryo chorioallantoic membrane (CAM) assay, associated with a decrease of HIF-1α and VEGF expression within tumors. Collectively, these findings provide new insights into the inhibitory effect of SFN on HCC tumor angiogenesis as well as tumor growth, and indicate that SFN has potential for the prevention and treatment of HCC.
Age-related neurodegenerative disease associated pathways identified in retinal and vitreous proteome from human glaucoma eyes
Authors: Mirzaei Mehdi , Gupta Veer B. , Chick Joel M. , Greco Todd M. , Wu Yunqi , Chitranshi Nitin , Wall Roshana Vander , Hone Eugene , Deng Liting , Dheer Yogita , Abbasi Mojdeh , Rezaeian Mahdie , Braidy Nady , You Yuyi , Salekdeh Ghasem Hosseini , Haynes Paul A. , Molloy Mark P. , Martins Ralph , Cristea Ileana M. , Gygi Steven P. , Graham Stuart L. , Gupta Vivek K. 
Published: September 2017

AbstarctGlaucoma is a chronic disease that shares many similarities with other neurodegenerative disorders of the central nervous system. This study was designed to evaluate the association between glaucoma and other neurodegenerative disorders by investigating glaucoma-associated protein changes in the retina and vitreous humour. The multiplexed Tandem Mass Tag based proteomics (TMT-MS3) was carried out on retinal tissue and vitreous humour fluid collected from glaucoma patients and age-matched controls followed by functional pathway and protein network interaction analysis. About 5000 proteins were quantified from retinal tissue and vitreous fluid of glaucoma and control eyes. Of the differentially regulated proteins, 122 were found linked with pathophysiology of Alzheimer’s disease (AD). Pathway analyses of differentially regulated proteins indicate defects in mitochondrial oxidative phosphorylation machinery. The classical complement pathway associated proteins were activated in the glaucoma samples suggesting an innate inflammatory response. The majority of common differentially regulated proteins in both tissues were members of functional protein networks associated brain changes in AD and other chronic degenerative conditions. Identification of previously reported and novel pathways in glaucoma that overlap with other CNS neurodegenerative disorders promises to provide renewed understanding of the aetiology and pathogenesis of age related neurodegenerative diseases.
Non-neutralizing Antibodies Targeting the V1V2 Domain of HIV Exhibit Strong Antibody-Dependent Cell-mediated Cytotoxic Activity
Authors: Mayr Luzia M. , Decoville Thomas , Schmidt Sylvie , Laumond Géraldine , Klingler Jéromine , Ducloy Camille , Bahram Seiamak , Zolla-Pazner Susan , Moog Christiane 
Published: September 2017

AbstractThe development of an effective vaccine against HIV-1 has proven to be challenging. Broadly neutralizing antibodies (bNAbs), whilst exhibiting neutralization breadth and potency, are elicited only in a small subset of infected individuals and have yet to be induced by vaccination. Case-control studies of RV144 identified an inverse correlation of HIV-1 infection risk with antibodies (Abs) to the V1V2 region of gp120 with high antibody-dependent cellular cytotoxicity (ADCC) activity. The neutralizing activity of Abs was not found to contribute to this protective outcome. Using primary effector and target cells and primary virus isolates, we studied the ADCC profile of different monoclonal Abs targeting the V1V2 loop of gp120 that had low or no neutralizing activity. We compared their ADCC activity to some bNAbs targeting different regions of gp120. We found that mAbs targeting the V1V2 domain induce up to 60% NK cell mediated lysis of HIV-1 infected PBMCs in a physiologically relevant ADCC model, highlighting the interest in inducing such Abs in future HIV vaccine trials. Our data also suggest that in addition to neutralization, lysis of infected cells by Abs can effectively participate in HIV protection, as suggested by the RV144 immune correlate analysis.
AMPK is not required for the effect of metformin on the inhibition of BMP6-induced hepcidin gene expression in hepatocytes
Authors: Deschemin Jean-Christophe , Foretz Marc , Viollet Benoit , Vaulont Sophie 
Published: September 2017

AbstractThe biguanide metformin is used for its antidiabetic effect for many years but how metformin acts remains poorly understood and controversial. AMP-activated protein kinase (AMPK), a protein kinase that plays a key role in maintaining energy homeostasis, is assumed to be one of the prime targets of metformin. However, since our demonstration that AMPK is not required for the beneficial effects of metformin on the control of glycemia, the list of AMPK-independent actions of metformin is rapidly increasing. Given the conflicting results on the effects of metformin we sought, using our genetic mouse models deficient in the catalytic subunits of AMPK, to determine whether this kinase is involved in the effects of metformin on the expression of the iron-regulatory hormone hepcidin, as recently proposed. Here we demonstrate, using different approaches, either isolated hepatocytes that lack AMPK, or direct AMPK activators, that, AMPK activation is not necessary for metformin to inhibit BMP6-induced hepcidin gene expression. These results may shed new lights on the increasingly recognized AMPK-independent metformin’s molecular action, an important area of current research.
Noninvasive Continuous Glucose Monitoring Using a Multisensor-Based Glucometer and Time Series Analysis
Authors: Geng Zhanxiao , Tang Fei , Ding Yadong , Li Shuzhe , Wang Xiaohao 
Published: September 2017

AbstractDaily continuous glucose monitoring is very helpful in the control of glucose levels for people with diabetes and impaired glucose tolerance. In this study, a multisensor-based, noninvasive continuous glucometer was developed, which can continuously estimate glucose levels via monitoring of physiological parameter changes such as impedance spectroscopy at low and high frequency, optical properties, temperature and humidity. Thirty-three experiments were conducted for six healthy volunteers and three volunteers with diabetes. Results showed that the average correlation coefficient between the estimated glucose profiles and reference glucose profiles reached 0.8314, with a normalized root mean squared error (NRMSE) of 14.6064. The peak time of postprandial glucose was extracted from the glucose profile, and its estimated value had a correlation coefficient of 0.9449 with the reference value, wherein the root mean square error (RMSE) was 6.8958 min. Using Clarke error grid (CEG) analysis, 100% of the estimated glucose values fell in the clinically acceptable zones A and B, and 92.86% fell in zone A. The application of a multisensor-based, noninvasive continuous glucometer and time series analysis can endure the time delay between human physiological parameters and glucose level changes, so as to potentially accomplish noninvasive daily continuous glucose monitoring.
A machine-learning heuristic to improve gene score prediction of polygenic traits
Authors: Paré Guillaume , Mao Shihong , Deng Wei Q. 
Published: September 2017

AbstractMachine-learning techniques have helped solve a broad range of prediction problems, yet are not widely used to build polygenic risk scores for the prediction of complex traits. We propose a novel heuristic based on machine-learning techniques (GraBLD) to boost the predictive performance of polygenic risk scores. Gradient boosted regression trees were first used to optimize the weights of SNPs included in the score, followed by a novel regional adjustment for linkage disequilibrium. A calibration set with sample size of ~200 individuals was sufficient for optimal performance. GraBLD yielded prediction R2 of 0.239 and 0.082 using GIANT summary association statistics for height and BMI in the UK Biobank study (N = 130 K; 1.98 M SNPs), explaining 46.9% and 32.7% of the overall polygenic variance, respectively. For diabetes status, the area under the receiver operating characteristic curve was 0.602 in the UK Biobank study using summary-level association statistics from the DIAGRAM consortium. GraBLD outperformed other polygenic score heuristics for the prediction of height (p < 2.2 × 10−16) and BMI (p < 1.57 × 10−4), and was equivalent to LDpred for diabetes. Results were independently validated in the Health and Retirement Study (N = 8,292; 688,398 SNPs). Our report demonstrates the use of machine-learning techniques, coupled with summary-level data from large genome-wide meta-analyses to improve the prediction of polygenic traits.
An archaeal RNA binding protein, FAU-1, is a novel ribonuclease related to rRNA stability in Pyrococcus and Thermococcus
Authors: Ikeda Yoshiki , Okada Yasuhiro , Sato Asako , Kanai Tamotsu , Tomita Masaru , Atomi Haruyuki , Kanai Akio 
Published: September 2017

AbstractRibosome biogenesis and turnover are processes necessary for cell viability and proliferation, and many kinds of proteins are known to regulate these processes. However, many questions still remain, especially in the Archaea. Generally, several ribonucleases are required to process precursor rRNAs to their mature forms, and to degrade rRNAs for quality control. Here, we found that FAU-1, which is known to be an RNA binding protein, possesses an RNase activity against precursor 5S rRNA derived from P. furiosus and T. kodakarensis in the order Thermococcales in vitro. An in vitro analysis revealed that UA sequences in the upstream of 5S rRNA were preferentially degraded by addition of FAU-1. Moreover, a fau-1 gene deletion mutant of T. kodakarensis showed a delay of exponential phase, reduction of maximum cell number and significant changes in the nucleotide sequence lengths of its 5S, 16S, and 23S rRNAs in early exponential phase. Our results suggest that FAU-1 is a potential RNase involved in rRNA stability through maturation and/or degradation processes.
Gender Disparities in Lipid Goal Attainment among Type 2 Diabetes Outpatients with Coronary Heart Disease: Results from the CCMR-3B Study
Authors: Zhang Xiaomei , Ji Linong , Ran Xingwu , Su Benli , Ji Qiuhe , Hu Dayi 
Published: September 2017

AbstractOur study was aimed to investigate the gender disparities in lipid goal attainment among type 2 diabetes outpatients with concomitant coronary heart disease (CHD) and explore potential risk factors. We performed the present analysis using data from a nationally representative epidemiologic study. The therapeutic goal was defined as achieving a low-density lipoprotein cholesterol (LDL-C) <1.8 mmol/L. A total of 1721 male and 2072 female type 2 diabetes outpatients with established CHD were identified. Compared with men, women had higher levels of total cholesterol (4.98 vs. 4.46 mmol/L; p < 0.001), LDL-C (2.82 vs. 2.54 mmol/L; p < 0.001), and triglycerides (2.02 vs. 1.79 mmol/L; p < 0.001), but not hemoglobin A1c (7.47% vs. 7.50%; p = 0.597). The proportion of women received lipid-lowering therapy was lower (38.1% vs. 48.2%; p < 0.001). The percentages of patients who achieved the LDL-C goal were higher among men. Multivariable regression analysis indicated that the odds ratio for lipid goal attainment due to the gender difference was 0.61 after adjusting confounders. The inability to achieve LDL-C goals in women with type 2 diabetes and CHD is apparently greater than that in men. This finding underscores the importance of initiatives to establish a more aggressive lipid management strategy for women to overcome gender imbalances.
High‐power single spatial mode superluminescent diodes at 675 nm
Authors: Andreeva E.V. , Anikeev A.S. , Il'chenko S.N. , Chamorovskiy A. , Yakubovich S.D. 
Published: September 2017

The optimisation of AlGaInP/GaInPAs MQW heterostructure metal‐organic chemical vapour deposition growth as well as the improvements of active channel formation and P‐contact deposition technologies is shown to enable a significantly increased external differential efficiency up to 0.5 mW/mA and catastrophic optical damage threshold up to 50 mW of spatially single‐mode superluminescent diodes (SLDs) at central wavelength of 675 nm. Life time tests demonstrated high reliability of new SLDs at continuous wave output power of up to 30 mW. The dependencies of spectral and power characteristics of these SLDs on active channel dimensions are presented. To the best of knowledge, these are the most powerful and broadband SLDs at 675 nm.
Synthetic Approaches to 2,6-trans-Tetrahydropyrans
Authors: Tong Rongbiao , Zhang Zhihong 
Published: September 2017

Being different from 2,6-cis-tetrahydropyrans (2,6-cis-THPs), the corresponding 2,6-trans-THPs are thermodynamically less stable and more challenging to construct. The fact that there are many natural products and/or bioactive molecules containing this 2,6-trans-THP subunit has led to the development of many efficient synthetic approaches to access 2,6-trans-THPs. This review summarizes various synthetic methods reported for this structural motif and/or related applications in the total synthesis of natural products.1	Introduction2	Nucleophilic Addition to an Oxocarbenium Ion (Strategy A)3	Intramolecular Oxa-Michael Addition (Strategy B)4	Intermolecular Michael Addition to Dihydropyranones (Strategy A)5	The Heck–Matsuda (Strategy A) Reaction and Oxa-Heck Cyclization (Strategy B)6	Intramolecular SN2 Substitution and Epoxide Opening (Strategy B)7	Miscellaneous Methods8	Conclusion and Outlook
Duhamel and Transanal Endorectal Pull-throughs for Hirschsprung' Disease: A Systematic Review and Meta-analysis
Authors: Miyake Hiromu , Hock Alison , Koike Yuhki , Yong Chen , Lee Carol , Li Bo , Pierro Agostino , Seo Shogo 
Published: September 2017

Aim The Duhamel pull-through and transanal endorectal pull-through (TEPT) are commonly used for the treatment of Hirschsprung's disease (HD). To date, there has been no meta-analysis evaluating postoperative outcomes following Duhamel pull-through and TEPT. The purpose of this meta-analysis was to compare patient outcome after Duhamel pull-through and TEPT for HD.
Materials and Methods Original articles published between 1998 and 2016 were identified using the MEDLINE database. Studies comparing Duhamel pull-through and TEPT were included. Outcomes evaluated included incidence of postoperative constipation, incontinence/soiling, enterocolitis, anastomotic stricture, and leak. We analyzed dichotomous variables by estimating odds ratios (OR) with 95% confidence intervals (CI) and continuous variables using the weighted mean difference with 95% CI. The meta-analysis was done using RevMan 5.3.
Result There were no randomized controlled trials. Seven observational clinical studies were included, comprising 260 cases of Duhamel pull-through and 170 cases of TEPT. Anastomotic stricture (OR = 0.10; 95%CI 0.02–0.48; p = 0.004) was lower following Duhamel pull-through than TEPT. There were no significant differences in the incidence of postoperative incontinence/soiling and anastomotic leak. After TEPT, postoperative constipation seems to be lower and enterocolitis higher compared with those after Duhamel pull-through; however, these differences are not significant when the follow-up period is equal between groups.
Conclusion The Duhamel pull-through seems to be associated with lower incidence of anastomotic stricture compared with TEPT. The effects of the two analyzed operative techniques on constipation and enterocolitis remain unclear. The quality of evidence supporting the above findings is suboptimal, indicating the need for prospective studies.