bluuebunny/crossref_metadata_2025_split huggingface dataset:
TESTING THE MAGNETAR MODEL VIA LATE-TIME RADIO OBSERVATIONS OF TWO MACRONOVA CANDIDATES
Authors: Horesh Assaf , Hotokezaka Kenta , Piran Tsvi , Nakar Ehud , Hancock Paul 
Published: March 2016

ABSTRACT
Compact binary mergers may have already been observed as they are the leading model for short gamma-ray bursts (sGRBs). Radioactive decay within the ejecta from these mergers is expected to produce an infrared flare, dubbed macronova (or kilonova), on a timescale of a week. Recently, two such macronova candidates were identified in followup observations of sGRBs, strengthening the possibility that those indeed arise from mergers. The same ejecta will also produce long-term (months to years) radio emission due to its interaction with the surrounding interstellar medium. In the search for this emission, we observed the two macronova candidates, GRB 130603B and GRB 060614, with the Jansky Very Large Array (VLA) and the Australia Telescope Compact Array (ATCA). Our observations resulted in null-detections, putting strong upper limits on the kinetic energy and mass of the ejecta. A possible outcome of a merger is a highly magnetized neutron star (a magnetar), which has been suggested as the central engine for GRBs. Such a magnetar will deposit a significant fraction of its energy into the ejecta leading to a brighter radio flare. Our results, therefore, rule out magnetars in these two events.
OBSERVATIONAL EVIDENCE FOR VARIATIONS OF THE ACOUSTIC CUTOFF FREQUENCY WITH HEIGHT IN THE SOLAR ATMOSPHERE
Authors: Wiśniewska A. , Musielak Z. E. , Staiger J. , Roth M. 
Published: March 2016

ABSTRACT
Direct evidence for the existence of an acoustic cutoff frequency in the solar atmosphere is given by observations performed by using the HELioseismological Large Regions Interferometric DEvice operating on the Vacuum Tower Telescope located on Tenerife. The observational results demonstrate variations of the cutoff with atmospheric heights. The observed variations of the cutoff are compared to theoretical predictions made by using five acoustic cutoff frequencies that have been commonly used in helioseismology and asteroseismology. The comparison shows that none of the theoretical predictions is fully consistent with the observational data. The implication of this finding is far reaching as it urgently requires either major revisions of the existing methods of finding acoustic cutoff frequencies or developing new methods that would much better account for the physical picture underlying the concept of cutoff frequencies in inhomogeneous media.
Global dimming and urbanization: did stronger negative SSR trends collocate with regions of population growth?
Authors: Imamovic Adel , Tanaka Katsumasa , Folini Doris , Wild Martin 
Published: March 2016

Abstract. Global dimming refers to the decrease in surface solar radiation (SSR) observed from the 1960s to the 1980s at different measurement sites all around the world. It is under debate whether anthropogenic aerosols emitted from urban areas close to the measurement sites are mainly responsible for the dimming. In order to assess this urbanization impact on SSR, we use spatially explicit population density data of 0.08° resolution to construct population indices (PI) at 157 high data quality sites. Our study extends previous population-based studies by incorporating distance-weighting as a simple aerosol diffusion model. We measured urbanization in the surrounding of a site as the PI change from 1960 to 1990 and found no negative correlation with the corresponding SSR trends from 1964 to 1989 for the 92 sites in Europe and Japan. For the 39 sites in China the correlation coefficients are significant at the 5 % level and reach around −0.35, while for the 26 remaining Asian, mostly Russian sites the correlation coefficients reach around −0.55 at the 1 % significance level. Results are similar, when the absolute levels of PIs are taken as an indicator for urbanization. Our findings call into question the existence of an urbanization effect for the sites in Europe and Japan, while such an effect cannot be ruled out for the sites in Asia, especially in Russia.
Detailed budget analysis of HONO in central London reveals a missing daytime source
Authors: Lee J. D. , Whalley L. K. , Heard D. E. , Stone D. , Dunmore R. E. , Hamilton J. F. , Young D. E. , Allan J. D. , Laufs S. , Kleffmann J. 
Published: March 2016

Abstract. Measurements of HONO were carried out at an urban background site near central London as part of the Clean air for London (ClearfLo) project in summer 2012. Data were collected from 22 July to 18 August 2014, with peak values of up to 1.8 ppbV at night and non-zero values of between 0.2 and 0.6 ppbV seen during the day. A wide range of other gas phase, aerosol, radiation, and meteorological measurements were made concurrently at the same site, allowing a detailed analysis of the chemistry to be carried out. The peak HONO/NOx ratio of 0.04 is seen at  ∼  02:00 UTC, with the presence of a second, daytime, peak in HONO/NOx of similar magnitude to the night-time peak, suggesting a significant secondary daytime HONO source. A photostationary state calculation of HONO involving formation from the reaction of OH and NO and loss from photolysis, reaction with OH, and dry deposition shows a significant underestimation during the day, with calculated values being close to 0, compared to the measurement average of 0.4 ppbV at midday. The addition of further HONO sources from the literature, including dark conversion of NO2 on surfaces, direct emission, photolysis of ortho-substituted nitrophenols, the postulated formation from the reaction of HO2 ×  H2O with NO2, photolysis of adsorbed HNO3 on ground and aerosols, and HONO produced by photosensitized conversion of NO2 on the surface increases the daytime modelled HONO to 0.1 ppbV, still leaving a significant missing daytime source. The missing HONO is plotted against a series of parameters including NO2 and OH reactivity (used as a proxy for organic material), with little correlation seen. Much better correlation is observed with the product of these species with j(NO2), in particular NO2 and the product of NO2 with OH reactivity. This suggests the missing HONO source is in some way related to NO2 and also requires sunlight. Increasing the photosensitized surface conversion rate of NO2 by a factor of 10 to a mean daytime first-order loss of  ∼ 6 × 10−5 s−1 (but which varies as a function of j(NO2)) closes the daytime HONO budget at all times (apart from the late afternoon), suggesting that urban surfaces may enhance this photosensitized source. The effect of the missing HONO to OH radical production is also investigated and it is shown that the model needs to be constrained to measured HONO in order to accurately reproduce the OH radical measurements.
Temporal consistency of lidar observations during aerosol transport events in the framework of the ChArMEx/ADRIMED campaign at Minorca in June 2013
Authors: Chazette Patrick , Totems Julien , Ancellet Gérard , Pelon Jacques , Sicard Michaël 
Published: March 2016

Abstract. We performed synergetic daytime and nighttime active and passive remote-sensing observations at Minorca (Balearic Islands, Spain), over more than 3 weeks during the Chemistry-Aerosol Mediterranean Experiment/Aerosol Direct Radiative Effect in the Mediterranean (ChArMEx/ADRIMED) special observation period (SOP 1a, June–July 2013). We characterized the aerosol optical properties and type in the low and middle troposphere using an automated procedure combining Rayleigh–Mie–Raman lidar (355, 387 and 407 nm) with depolarization (355 nm) and AERONET Cimel® sun-photometer data. Results show a high variability due to varying dynamical forcing. The mean column-averaged lidar backscatter-to-extinction ratio (BER) was close to 0.024 sr−1 (lidar ratio of  ∼ 41.7 sr), with a large dispersion of ±33 % over the whole observation period due to changing atmospheric transport regimes and aerosol sources. The ground-based remote-sensing measurements, coupled with satellite observations, allowed the documentation of (i) dust particles up to 5 km (above sea level) in altitude originating from Morocco and Algeria from 15 to 18 June with a peak in aerosol optical thickness (AOT) of 0.25 ± 0.05 at 355 nm, (ii) a long-range transport of biomass burning aerosol (AOT  =  0.18 ± 0.16) related to North American forest fires detected from 26 to 28 June 2013 by the lidar between 2 and 7 km and (iii) mixture of local sources including marine aerosol particles and pollution from Spain. During the biomass burning event, the high value of the particle depolarization ratio (8–14 %) may imply the presence of dust-like particles mixed with the biomass burning aerosols in the mid-troposphere. For the field campaign period, we also show linearity with SEVIRI retrievals of the aerosol optical thickness despite 35 % relative bias, which is discussed as a function of aerosol type.
Afgeschermd wonen in Nederland: een studie naar waarom mensen hiervoor kiezen en hoe zij omgaan met interne regelgeving
Authors: Schuilenburg Marc , Van Steden Ronald 
Published: March 2016

Protected living in the Netherlands: why do people choose this way of living and how do they handle internal rules?
Protected living in some sort of gated community is popular. However Dutch protected living differs from, for instance, the living in American gated communities, the development tends to social discussions whether it is undesirable or not. Safety seems in the Netherlands not the first reason for protected living. Here, domestic and aesthetic reasons are much more important.
Spot on! Zelfredzaamheid en verwachtingen van burgers bij een black-out
Authors: De Pauw Evelien , Dormaels Arne , Easton Marleen 
Published: March 2016

Spot on! Self-efficacy and expectations of citizens during a black-out
Since winter 2014, Belgian is faced with a possible rolling out of power. Blackouts come without any warning whilst the duration and cause of it is mostly unclear. Rolling outs are usually planned by utility companies to put small service areas without electricity, to cope with a high energy demand that the utility companies can’t supply. This rolling out plan can prevent a larger blackout and should make people aware of the consequences of a possible black-out.Given this situation, this paper presents the result of a study asking citizens about their self-efficacy and organizations of their own house hold to deal with possible blackouts. For this survey, 473 citizens have been interviewed in 2 Belgian cities. We asked about their own action to organize themselves and were looking at their expectations of the government.
Charge-collection efficiency and long-term stability of single-crystal CVD diamond detector under different carrier-drift conditions
Authors: Sato Yuki , Murakami Hiroyuki , Shimaoka Takehiro , Tsubota Masakatsu , Kaneko Junichi H. 
Published: March 2016

Abstract
We investigate the performance of a charged-particle detector fabricated using single-crystal diamond grown by chemical vapor deposition. The detector identified four different 241Am α-particle energies (5.389, 5.443, 5.486, and 5.545 MeV) thanks to its superior energy resolution of 0.407 ± 0.004% for electron drift and 0.418 ± 0.004% for hole drift (full width at half maximum). The charge-collection efficiency inside the diamond crystal was above 97.0% for both electrons and holes. The diamond detector also exhibited no significant degradation in terms of pulse-height spectra and energy resolution during operation for more than 100 h under electron-drift conditions. In contrast, the pulse-height spectra obtained under hole-drift conditions deteriorated because of the polarization phenomenon.
A 15 × 15 single photon avalanche diode sensor featuring breakdown pixels extraction architecture for efficient data readout
Authors: Yang Xiao , Zhu Hongbo , Nakura Toru , Iizuka Tetsuya , Asada Kunihiro 
Published: March 2016

Abstract
This paper proposes a breakdown pixels extraction architecture for single photon avalanche diode (SPAD) based faint light detection systems. The proposed extraction circuit detects the breakdown pixels and only their addresses are readout. Therefore, under the faint light environment, this SPAD-based sensor significantly improves the data readout efficiency. In addition, since the readout sequence is 4× faster than that of the conventional architecture in the dark condition, the proposed system does not need an independent on-chip event detection circuit that consumes additional area and power. A test-of-concept chip with a 15 × 15 SPAD pixels array was fabricated in a 0.18 µm 1P5M standard CMOS process and pinhole diffraction patterns were successfully captured thanks to the high sensitivity of the SPAD sensor. Under the faint light condition, a high-speed readout is verified by measurement and the robustness of the proposed architecture is successfully demonstrated.
Screening high school students in Italy for sudden cardiac death prevention by using a telecardiology device: a retrospective observational study
Authors: De Lazzari Claudio , Genuini Igino , Gatto Maria C. , Cinque Alessandra , Mancone Massimo , D’Ambrosi Alessandra , Silvetti Elisa , Fusto Antonio , Pisanelli Domenico M. , Fedele Francesco 
Published: March 2016

AbstractBackgroundIn 2010, an Italian project was launched aimed at using a telecardiology device in order to perform early diagnosis of young students at risk of sudden cardiac death.MethodsOur retrospective observational study was conducted on a population of 13,016 students, aged between 16 and 19 years, in different Italian regions. It consisted of analysis of data recorded during a telecardiology pilot study. The recorded data were electrocardiograms and data concerning lifestyle habits and family history of cardiovascular diseases. In total, 14 alterations in the electrocardiogram signal have been considered in this study. Some of these alterations are as follows: ventricular ectopic beats, atrioventricular block, Brugada-like electrocardiogram pattern, left anterior/posterior fascicular block, left/right ventricular hypertrophy, long/short QT interval, left atrial enlargement, right atrial enlargement, short PQ interval, and ventricular pre-excitation Wolff–Parkinson–White syndrome. On the basis of the collected data, we implemented this retrospective observational study.ResultsThe analysed data showed that 13.60% of students had a family history for cardiovascular diseases, 22.43% reported smoking habits, 26.23% reported alcohol consumption, and 7.24% reported abuse of drugs. A total of 24% of students had at least one of the 14 electrocardiogram pathological alterations considered in our study and 32% had electrocardiogram values within the normal range.ConclusionsThis retrospective observational study analysed data registered during our telecardiology activity. This activity permitted to maximise data collection and minimise the costs for collecting such data. This activity of screening is being continued and in the next few years it will allow us to have a greater mass of data.
Ralstonia solanacearum lipopeptide induces chlamydospore development in fungi and facilitates bacterial entry into fungal tissues
Authors: Spraker Joseph E , Sanchez Laura M , Lowe Tiffany M , Dorrestein Pieter C , Keller Nancy P 
Published: March 2016

Abstract
Ralstonia solanacearum is a globally distributed soil-borne plant pathogenic bacterium, which shares a broad ecological range with many plant- and soil-associated fungi. We sought to determine if R. solanacearum chemical communication directs symbiotic development of polymicrobial consortia. R. solanacearum produced a diffusible metabolite that induced conserved morphological differentiation in 34 species of fungi across three diverse taxa (Ascomycetes, Basidiomycetes and Zygomycetes). Fungi exposed to this metabolite formed chlamydospores, survival structures with thickened cell walls. Some chlamydospores internally harbored R. solanacearum, indicating a newly described endofungal lifestyle for this important plant pathogen. Using imaging mass spectrometry and peptidogenomics, we identified an undescribed lipopeptide, ralsolamycin, produced by an R. solanacearum non-ribosomal peptide synthetase-polyketide synthase hybrid. Inactivation of the hybrid non-ribosomal peptide synthetase-polyketide synthase gene, rmyA, abolished ralsolamycin synthesis. R. solanacearum mutants lacking ralsolamycin no longer induced chlamydospore development in fungal coculture and invaded fungal hyphae less well than wild-type. We propose that ralsolamycin contributes to the invasion of fungal hyphae and that the formation of chlamydospores may provide not only a specific niche for bacterial colonization but also enhanced survival for the partnering fungus.
Genetic suppression reveals DNA repair-independent antagonism between BRCA1 and COBRA1 in mammary gland development
Authors: Nair Sreejith J. , Zhang Xiaowen , Chiang Huai-Chin , Jahid Md Jamiul , Wang Yao , Garza Paula , April Craig , Salathia Neeraj , Banerjee Tapahsama , Alenazi Fahad S. , Ruan Jianhua , Fan Jian-Bing , Parvin Jeffrey D. , Jin Victor X. , Hu Yanfen , Li Rong 
Published: March 2016

AbstractThe breast cancer susceptibility gene BRCA1 is well known for its function in double-strand break (DSB) DNA repair. While BRCA1 is also implicated in transcriptional regulation, the physiological significance remains unclear. COBRA1 (also known as NELF-B) is a BRCA1-binding protein that regulates RNA polymerase II (RNAPII) pausing and transcription elongation. Here we interrogate functional interaction between BRCA1 and COBRA1 during mouse mammary gland development. Tissue-specific deletion of Cobra1 reduces mammary epithelial compartments and blocks ductal morphogenesis, alveologenesis and lactogenesis, demonstrating a pivotal role of COBRA1 in adult tissue development. Remarkably, these developmental deficiencies due to Cobra1 knockout are largely rescued by additional loss of full-length Brca1. Furthermore, Brca1/Cobra1 double knockout restores developmental transcription at puberty, alters luminal epithelial homoeostasis, yet remains deficient in homologous recombination-based DSB repair. Thus our genetic suppression analysis uncovers a previously unappreciated, DNA repair-independent function of BRCA1 in antagonizing COBRA1-dependent transcription programme during mammary gland development.
Evolutionary diversification of the BetaM interactome acquired through co-option of the ATP1B4 gene in placental mammals
Authors: Korneenko Tatyana V. , Pestov Nikolay B. , Ahmad Nisar , Okkelman Irina A. , Dmitriev Ruslan I. , Shakhparonov Mikhail I. , Modyanov Nikolai N. 
Published: March 2016

AbstractATP1B4 genes represent a rare instance of orthologous vertebrate gene co-option that radically changed properties of the encoded BetaM proteins, which function as Na,K-ATPase subunits in lower vertebrates and birds. Eutherian BetaM has lost its ancestral function and became a muscle-specific resident of the inner nuclear membrane. Our earlier work implicated BetaM in regulation of gene expression through direct interaction with the transcriptional co-regulator SKIP. To gain insight into evolution of BetaM interactome we performed expanded screening of eutherian and avian cDNA libraries using yeast-two-hybrid and split-ubiquitin systems. The inventory of identified BetaM interactors includes lamina-associated protein LAP-1, myocyte nuclear envelope protein Syne1, BetaM itself, heme oxidases HMOX1 and HMOX2; transcription factor LZIP/CREB3, ERGIC3, PHF3, reticulocalbin-3 and β-sarcoglycan. No new interactions were found for chicken BetaM and human Na,K-ATPase β1, β2 and β3 isoforms, indicating the uniqueness of eutherian BetaM interactome. Analysis of truncated forms of BetaM indicates that residues 72-98 adjacent to the membrane in nucleoplasmic domain are important for the interaction with SKIP. These findings demonstrate that evolutionary alterations in structural and functional properties of eutherian BetaM proteins are associated with the increase in its interactome complexity.
Atlantic SSTs control regime shifts in forest fire activity of Northern Scandinavia
Authors: Drobyshev Igor , Bergeron Yves , Vernal Anne de , Moberg Anders , Ali Adam A. , Niklasson Mats 
Published: March 2016

AbstractUnderstanding the drivers of the boreal forest fire activity is challenging due to the complexity of the interactions driving fire regimes. We analyzed drivers of forest fire activity in Northern Scandinavia (above 60 N) by combining modern and proxy data over the Holocene. The results suggest that the cold climate in northern Scandinavia was generally characterized by dry conditions favourable to periods of regionally increased fire activity. We propose that the cold conditions over the northern North Atlantic, associated with low SSTs, expansion of sea ice cover and the southward shift in the position of the subpolar gyre, redirect southward the precipitation over Scandinavia, associated with the westerlies. This dynamics strengthens high pressure systems over Scandinavia and results in increased regional fire activity. Our study reveals a previously undocumented teleconnection between large scale climate and ocean dynamics over the North Atlantic and regional boreal forest fire activity in Northern Scandinavia. Consistency of the pattern observed annually through millennium scales suggests that a strong link between Atlantic SST and fire activity on multiple temporal scales over the entire Holocene is relevant for understanding future fire activity across the European boreal zone.
Mitochondrial coding genome analysis of tropical root-knot nematodes (Meloidogyne) supports haplotype based diagnostics and reveals evidence of recent reticulate evolution
Authors: Janssen Toon , Karssen Gerrit , Verhaeven Myrtle , Coyne Danny , Bert Wim 
Published: March 2016

AbstractThe polyphagous parthenogenetic root-knot nematodes of the genus Meloidogyne are considered to be the most significant nematode pest in sub-tropical and tropical agriculture. Despite the crucial need for correct diagnosis, identification of these pathogens remains problematic. The traditionally used diagnostic strategies, including morphometrics, host-range tests, biochemical and molecular techniques, now appear to be unreliable due to the recently-suggested hybrid origin of root-knot nematodes. In order to determine a suitable barcode region for these pathogens nine quickly-evolving mitochondrial coding genes were screened. Resulting haplotype networks revealed closely related lineages indicating a recent speciation, an anthropogenic-aided distribution through agricultural practices, and evidence for reticulate evolution within M. arenaria. Nonetheless, nucleotide polymorphisms harbor enough variation to distinguish these closely-related lineages. Furthermore, completeness of lineage sorting was verified by screening 80 populations from widespread geographical origins and variable hosts. Importantly, our results indicate that mitochondrial haplotypes are strongly linked and consistent with traditional esterase isozyme patterns, suggesting that different parthenogenetic lineages can be reliably identified using mitochondrial haplotypes. The study indicates that the barcode region Nad5 can reliably identify the major lineages of tropical root-knot nematodes.