bluuebunny/crossref_metadata_2025_split huggingface dataset:
Bamboo sheath—A modified branch based on the anatomical observations
Authors: Wang Shuguang 
Published: November 2017

AbstractCulm sheath has always been considered a modified leaf. In this study, the anatomical structure of the culm sheath from Fargesia yunnanensis was analyzed to determine whether it originated from the foliage leaf blade or from the branch. The vascular bundles of the culm sheath showed greater similarity to the branches in shape and anatomical structure. In contrast to foliage blades, there are no midribs in culm sheaths. Stomatal density in the culm sheath is greater in the adaxial than it is in the abaxial epidermis, which is the opposite of that found in foliage leaf blades, and that density shows greater similarity to branches than it does to foliage blades. Fusoid cells are distributed on both sites of the vascular bundles in foliage blades, whereas culm sheaths have, instead, a few parenchyma cells that disintegrate and form air cavities when the sheath matures. Additionally, the culm sheath has no bulliform cells or trichome in its epidermis, and the shape of its long cells shows greater similarity to those of branches. Therefore, culm sheath is a modified branch, rather than a modified leaf.
Toughness amplification in copper/epoxy joints through pulsed laser micro-machined interface heterogeneities
Authors: Hernandez Edwin , Alfano Marco , Pulungan Ditho , Lubineau Gilles 
Published: November 2017

AbstractThis work addresses the mechanics of debonding along copper/epoxy joints featuring patterned interfaces. Engineered surface heterogeneities with enhanced adhesion properties are generated through pulsed laser irradiation. Peel tests are carried out to ascertain the effect of patterns shape and area fraction on the mechanical response. Experimental results are evaluated with the support of three-dimensional finite element simulations based on the use of cohesive surfaces. Results discussion is largely framed in terms of effective peel force and energy absorbed to sever the samples. It is shown that surface heterogeneities act as sites of potential crack pinning able to trigger crack initiation, propagation and arrest. Surface patterns ultimately enable a remarkable increase in the effective peel force and dissipated energy with respect to baseline homogeneous sanded interface.
Autophagy protects pancreatic beta cell mass and function in the setting of a high-fat and high-glucose diet
Authors: Sheng Qingfeng , Xiao Xiangwei , Prasadan Krishna , Chen Congde , Ming Yungching , Fusco Joseph , Gangopadhyay Nupur N. , Ricks David , Gittes George K. 
Published: November 2017

AbstractAutophagy is a major regulator of pancreatic beta cell homeostasis. Altered autophagic activity has been implicated in the beta cells of patients with type 2 diabetes, and in the beta cells of obese diabetic rodents. Here, we show that autophagy was induced in beta cells by either a high-fat diet or a combined high-fat and high-glucose diet, but not by high-glucose alone. However, a high-glucose intake alone did increase beta cell mass and insulin secretion moderately. Depletion of Atg7, a necessary component of the autophagy pathway, in beta cells by pancreatic intra-ductal AAV8-shAtg7 infusion in C57BL/6 mice, resulted in decreased beta cell mass, impaired glucose tolerance, defective insulin secretion, and increased apoptosis when a combined high-fat and high-glucose diet was given, seemingly due to suppression of autophagy. Taken together, our findings suggest that the autophagy pathway may act as a protective mechanism in pancreatic beta cells during a high-calorie diet.
Enhanced strength and ductility in a friction stir processing engineered dual phase high entropy alloy
Authors: Nene S. S. , Liu K. , Frank M. , Mishra R. S. , Brennan R. E. , Cho K. C. , Li Z. , Raabe D. 
Published: November 2017

AbstractThe potential of high-entropy alloys (HEAs) to exhibit an extraordinary combination of properties by shifting the compositional regime from the corners towards the centers of phase diagrams has led to worldwide attention by material scientists. Here we present a strong and ductile non-equiatomic HEA obtained after friction stir processing (FSP). A transformation-induced plasticity (TRIP) assisted HEA with composition Fe50Mn30Co10Cr10 (at.%) was severely deformed by FSP and evaluated for its microstructure-mechanical property relationship. The FSP-engineered microstructure of the TRIP HEA exhibited a substantially smaller grain size, and optimized fractions of face-centered cubic (f.c.c., γ) and hexagonal close-packed (h.c.p., ε) phases, as compared to the as-homogenized reference material. This results in synergistic strengthening via TRIP, grain boundary strengthening, and effective strain partitioning between the γ and ε phases during deformation, thus leading to enhanced strength and ductility of the TRIP-assisted dual-phase HEA engineered via FSP.
CB2 receptor activation causes an ERK1/2-dependent inflammatory response in human RPE cells
Authors: Hytti M. , Andjelic S. , Josifovska N. , Piippo N. , Korhonen E. , Hawlina M. , Kaarniranta K. , Nevalainen T. J. , Petrovski G. , Parkkari T. , Kauppinen A. 
Published: November 2017

AbstractA chronic low-level inflammation contributes to the pathogenesis of age-related macular degeneration (AMD), the most common cause of blindness in the elderly in Western countries. The loss of central vision results from attenuated maintenance of photoreceptors due to the degeneration of retinal pigment epithelium (RPE) cells beneath the photoreceptor layer. It has been proposed that pathologic inflammation initiated in RPE cells could be regulated by the activation of type 2 cannabinoid receptors (CB2). Here, we have analysed the effect of CB2 activation on cellular survival and inflammation in human RPE cells. RPE cells were treated with the selective CB2 agonist JWH-133 in the presence or absence of the oxidative stressor 4-hydroxynonenal. Thereafter, cellular viability as well as the release of pro-inflammatory cytokines and potential underlying signalling pathways were analysed. Our results show that JWH-133 led to increased intracellular Ca2+ levels, suggesting that RPE cells are capable of responding to a CB2 agonist. JWH-133 could not prevent oxidative stress-induced cell death. Instead, 10 µM JWH-133 increased cell death and the release of proinflammatory cytokines in an ERK1/2-dependent manner. In contrast to previous findings, CB2 activation increased, rather than reduced inflammation in RPE cells.
Egr1 deficiency induces browning of inguinal subcutaneous white adipose tissue in mice
Authors: Milet Cécile , Bléher Marianne , Allbright Kassandra , Orgeur Mickael , Coulpier Fanny , Duprez Delphine , Havis Emmanuelle 
Published: November 2017

AbstractBeige adipocyte differentiation within white adipose tissue, referred to as browning, is seen as a possible mechanism for increasing energy expenditure. The molecular regulation underlying the thermogenic browning process has not been entirely elucidated. Here, we identify the zinc finger transcription factor EGR1 as a negative regulator of the beige fat program. Loss of Egr1 in mice promotes browning in the absence of external stimulation and leads to an increase of Ucp1 expression, which encodes the key thermogenic mitochondrial uncoupling protein-1. Moreover, EGR1 is recruited to the proximal region of the Ucp1 promoter in subcutaneous inguinal white adipose tissue. Transcriptomic analysis of subcutaneous inguinal white adipose tissue in the absence of Egr1 identifies the molecular signature of white adipocyte browning downstream of Egr1 deletion and highlights a concomitant increase of beige differentiation marker and a decrease in extracellular matrix gene expression. Conversely, Egr1 overexpression in mesenchymal stem cells decreases beige adipocyte differentiation, while increasing extracellular matrix production. These results reveal a role for Egr1 in blocking energy expenditure via direct Ucp1 transcription repression and highlight Egr1 as a therapeutic target for counteracting obesity.
Transcriptome profile analysis reveals the regulation mechanism of floral sex differentiation in Jatropha curcas L
Authors: Hui Wenkai , Yang Yuantong , Wu Guojiang , Peng Changcao , Chen Xiaoyang , Zayed Mohamed Zaky 
Published: November 2017

AbstractThe seeds of Jatropha curcas contain a high percentage of biodiesel. However, low seed yield which was limited by its poor female flowers was a bottleneck for its utilization. Here, we compared the transcriptomic profiles of five different samples during floral sex differentiation stages using Illumina Hiseq 4000. Our results showed that hundreds of differentially expressed genes (DEGs) were detected in floral sex initiation period, but thousands of DEGs were involved in the stamens and ovules development process. Moreover, the DEGs were mainly shown up-regulation in male floral initiation, but mainly down-regulation in female floral initiation. Male floral initiation was associated with the flavonoid biosynthesis pathway while female floral initiation was related to the phytohormone signal transduction pathway. Cytokinin (CTK) signaling triggered the initiation of female floral primordium, thereafter other phytohormones co-promoted the female floral development. In addition, the floral organ identity genes played important roles in floral sex differentiation process and displayed a general conservation of the ABCDE model in J. curcas. To the best of our knowledge, this data is the first comprehensive analysis of the underlying regulatory mechanism and the related genes during floral sex differentiation in J. curcas, which help in engineering high-yielding varieties of J. curcas.
Rare non-coding variants are associated with plasma lipid traits in a founder population
Authors: Igartua Catherine , Mozaffari Sahar V. , Nicolae Dan L. , Ober Carole 
Published: November 2017

AbstractFounder populations are ideally suited for studies on the clinical effects of alleles that are rare in general populations but occur at higher frequencies in these isolated populations. Whole genome sequencing in 98 Hutterites, a founder population of European descent, and subsequent imputation revealed 660,238 single nucleotide polymorphisms that are rare (<1%) or absent in European populations, but occur at frequencies >1% in the Hutterites. We examined the effects of these rare in European variants on plasma lipid levels in 828 Hutterites and applied a Bayesian hierarchical framework to prioritize potentially causal variants based on functional annotations. We identified two novel non-coding rare variants associated with LDL cholesterol (rs17242388 in LDLR) and HDL cholesterol (rs189679427 between GOT2 and APOOP5), and replicated previous associations of a splice variant in APOC3 (rs138326449) with triglycerides and HDL-C. All three variants are at well-replicated loci in GWAS but are independent from and have larger effect sizes than the known common variation in these regions. Candidate eQTL analyses in in LCLs in the Hutterites suggest that these rare non-coding variants are likely to mediate their effects on lipid traits by regulating gene expression.
Transient locking of the hook procures enhanced motility to flagellated bacteria
Authors: Duchesne Ismaël , Galstian Tigran , Rainville Simon 
Published: November 2017

AbstractFlagellated bacteria often proliferate in inhomogeneous environments, such as biofilms, swarms and soil. In such media, bacteria are observed to move efficiently only if they can get out of “dead ends” by changing drastically their swimming direction, and even to completely reverse it. Even though these reorientations are ubiquitous, we have only recently begun to describe and understand how they happen. In the present work, we visualized the flagella of bacteria swimming in a soft agar solution. The surprising observation that the filaments do not rotate while being flipped from one side of the cell to the other suggests that reversals are driven directly by the motor rather than by the thrust created by the rotating filament. This was confirmed by observing bacteria in a liquid crystal, where the linear movement of bacteria greatly simplifies the analysis. These observations suggest that the reversal and reorientation processes involve a temporary locking of the flagellum’s hook, which is the normally flexible joint between the rotary motor and the long helical filament that propels the cell. This newly described locked-hook mode occurs only when the motor switches to a clockwise rotation. That correlates with other phenomena that are triggered by a switch in one direction and not the other.
ATF4 overexpression induces early onset of hyperlipidaemia and hepatic steatosis and enhances adipogenesis in zebrafish
Authors: Yeh Kun-Yun , Lai Chi-Yu , Lin Chiu-Ya , Hsu Chia-Chun , Lo Chung-Ping , Her Guor Mour 
Published: November 2017

AbstractActivating transcription factor 4 (ATF4) is constitutively expressed in a variety of tissues, and regulates several pathological features associated with metabolic diseases such as non-alcoholic fatty liver diseases (NAFLD) and obesity. However, the role of ATF4 in animal model systems is poorly understood. To investigate ATF4 functions in zebrafish, we conditionally expressed ATF4 proteins, using a Tet-off transgenic system. We observed early-onset hyperlipidaemia and liver steatosis in ATF4 transgenic zebrafish (ATs) without doxycycline treatment (ATs − Dox). Oil Red O (ORO)-stained signals were predominant in the intravascular blood vessels and liver buds of larval ATs − Dox, indicating that ATF4 functionally promotes lipogenesis. Further, ATF4 overexpression accompanied the stimulation of the unfolded protein response. Therefore, adult ATs − Dox showed increased lipid accumulation, which led, in turn, to liver steatosis. Liver histology and ORO staining of ATs − Dox hepatocytes also indicated oxidative stress and induced NASH-like phenotypes. Moreover, ATF4 overexpression accelerated adipocyte differentiation via CCAAT enhancer binding protein-beta and peroxisome proliferator activated receptor-gamma inducible expression. ATs-Dox zebrafish showed increased weight gain with larger fat pads due to adipocyte hyperplasia. In this study, we report that ATF4 is a potential stimulator of lipid biosynthesis and adipogenesis in zebrafish.
Drosophila Kruppel homolog 1 represses lipolysis through interaction with dFOXO
Authors: Kang Ping , Chang Kai , Liu Ying , Bouska Mark , Birnbaum Allison , Karashchuk Galina , Thakore Rachel , Zheng Wenjing , Post Stephanie , Brent Colin S. , Li Sheng , Tatar Marc , Bai Hua 
Published: November 2017

AbstractTranscriptional coordination is a vital process contributing to metabolic homeostasis. As one of the key nodes in the metabolic network, the forkhead transcription factor FOXO has been shown to interact with diverse transcription co-factors and integrate signals from multiple pathways to control metabolism, oxidative stress response, and cell cycle. Recently, insulin/FOXO signaling has been implicated in the regulation of insect development via the interaction with insect hormones, such as ecdysone and juvenile hormone. In this study, we identified an interaction between Drosophila FOXO (dFOXO) and the zinc finger transcription factor Kruppel homolog 1 (Kr-h1), one of the key players in juvenile hormone signaling. We found that Kr-h1 mutants show delayed larval development and altered lipid metabolism, in particular induced lipolysis upon starvation. Notably, Kr-h1 physically and genetically interacts with dFOXO in vitro and in vivo to regulate the transcriptional activation of insulin receptor (InR) and adipose lipase brummer (bmm). The transcriptional co-regulation by Kr-h1 and dFOXO may represent a broad mechanism by which Kruppel-like factors integrate with insulin signaling to maintain metabolic homeostasis and coordinate organism growth.
Longitudinal study of visual field changes determined by Humphrey Field Analyzer 10-2 in patients with Retinitis Pigmentosa
Authors: Sayo Akira , Ueno Shinji , Kominami Taro , Nishida Kazuki , Inooka Daiki , Nakanishi Ayami , Yasuda Shunsuke , Okado Satoshi , Takahashi Kunihiko , Matsui Shigeyuki , Terasaki Hiroko 
Published: November 2017

AbstractThe aim of this study is to determine the progress of the visual field defects obtained by the Humphrey Field Analyzer 10-2 program (HFA 10-2) in patients with retinitis pigmentosa (RP). The medical records of 45 eyes of 45 RP patients who had at least 3 visual field tests were reviewed. Linear mixed models were used to follow the changes of the mean deviation and the average sensitivity of 4, 12, and 20 points in three concentric squares, designated as S4, S12, and S20. The median follow-up time was 3.86 years [range: 1.93 to 9.86, IQR (Interquartile range): 3.01 to 4.93]. The median number of the visual field tests was 3 (range: 3 to 15, IQR: 3 to 4). The mean change of the MD was −0.46 dB/year (−5.80%/year). When the patients were grouped by the average initial MD, the less advanced group had slower progressions than the more advanced group in S4, S12, and S20. These results should be useful in understanding the pathological changes of RP in the central visual field.
Clipping has stronger effects on plant production than does warming in three alpine meadow sites on the Northern Tibetan Plateau
Authors: Fu Gang , Shen Zhen Xi 
Published: November 2017

AbstractThe relative effects of warming and clipping on vegetation growth are not fully understood. Therefore, we compared the relative effects of experimental warming and clipping on the normalised difference vegetation index (NDVI), green NDVI (GNDVI), soil-adjusted vegetation index (SAVI), aboveground biomass (AGB) and gross primary production (GPP) in three alpine meadow sites (A, B and C) on the Northern Tibetan Plateau from 2013 to 2015. There were no obvious effects of experimental warming on the NDVI, GNDVI, SAVI, AGB and GPP at the three sites, which were most likely attributed to experimental warming-induced warming and drying conditions. In contrast, clipping significantly decreased the NDVI, SAVI and AGB by 27.8%, 31.3% and 18.2% at site A, by 27.1%, 31.8% and 27.7% at site B, and by 12.3%, 15.1% and 17.6% at site C, respectively. Clipping also significantly reduced the GNDVI and GPP by 11.1% and 28.2% at site A and by 18.9% and 33.7% at site B, respectively. Clipping marginally decreased the GNDVI by 8.7% (p = 0.060) and GPP (p = 0.082) by 14.4% at site C. Therefore, clipping had stronger effects on vegetation growth than did warming in the three alpine meadow sites on the Tibetan Plateau.
High-efficiency exfoliation of large-area mono-layer graphene oxide with controlled dimension
Authors: Park Won Kyu , Yoon Yeojoon , Song Young Hyun , Choi Su Yeon , Kim Seungdu , Do Youngjin , Lee Junghyun , Park Hyesung , Yoon Dae Ho , Yang Woo Seok 
Published: November 2017

AbstractIn this work, we introduce a novel and facile method of exfoliating large-area, single-layer graphene oxide using a shearing stress. The shearing stress reactor consists of two concentric cylinders, where the inner cylinder rotates at controlled speed while the outer cylinder is kept stationary. We found that the formation of Taylor vortex flow with shearing stress can effectively exfoliate the graphite oxide, resulting in large-area single- or few-layer graphene oxide (GO) platelets with high yields (>90%) within 60 min of reaction time. Moreover, the lateral size of exfoliated GO sheets was readily tunable by simply controlling the rotational speed of the reactor and reaction time. Our approach for high-efficiency exfoliation of GO with controlled dimension may find its utility in numerous industrial applications including energy storage, conducting composite, electronic device, and supporting frameworks of catalyst.
Novel predators emit novel cues: a mechanism for prey naivety towards alien predators
Authors: Carthey Alexandra J. R. , Bucknall Martin P. , Wierucka Kaja , Banks Peter B. 
Published: November 2017

AbstractDetecting enemies is crucial for survival and a trait that develops over an evolutionary timeframe. Introduced species disrupt coevolved systems of communication and detection in their new ranges, often leading to devastating impacts. The classic example is prey naivety towards alien predators, whereby prey fail to recognise a new predator. Yet exactly why native prey fail to recognise alien predators remains puzzling. Naivety theory predicts that it is because novel predators emit novel cues. Distantly related animals have distinct evolutionary histories, physiologies and ecologies, predicting they will emit different cues. Yet it also possible that all predators emit similar cues because they are carnivorous. We investigate whether odour cues differ between placental and marsupial carnivores in Australia, where native prey experienced only marsupial mammal predation until ~4000 years ago. We compared volatile chemical profiles of urine, scats and bedding from four placental and three marsupial predators. Chemical profiles showed little overlap between placental and marsupial carnivores across all odour types, suggesting that cue novelty is a plausible mechanism for prey naivety towards alien predators. Our results also suggest a role for olfactory cues to complement visual appearance and vocalisations as biologically meaningful ways to differentiate species.
Performance on emotional tasks engaging cognitive control depends on emotional intelligence abilities: an ERP study
Authors: Megías A. , Gutiérrez-Cobo M. J. , Gómez-Leal R. , Cabello R. , Fernández-Berrocal P. 
Published: November 2017

AbstractCognitive control is a key process in decision making and adequately adapting our behavior to the environment. Previous studies have provided evidence of a lower capacity for cognitive control in emotion-laden contexts in comparison with neutral contexts. The aim of the present research was to study changes in cognitive control performance as a function of emotional intelligence (EI) level in contexts involving emotional information. The study sample was composed of 2 groups of 22 participants each: the high and low EI group. Participants carried out an emotional go/no-go task while brain activity was recorded by EEG. N2 and P3 ERPs were used as indices of cognitive control processing. Participants with higher EI showed a larger N2, reflecting a greater capacity for cognitive control related to changes in conflict monitoring, and to a better detection and evaluation of the emotional stimuli. Moreover, in general, response inhibition accuracy was reduced when emotional information was involved in this process. Our findings reveal that neural mechanisms underlying tasks that engage cognitive control depend on emotional content and EI level. This study indicates the important role played by EI in the relationship between emotion and cognition. EI training may be a very useful tool for improving performance in emotion-laden contexts.