bluuebunny/crossref_metadata_2025_split huggingface dataset:
Attentional gain is modulated by probabilistic feature expectations in a spatial cueing task: ERP evidence
Authors: Marzecová Anna , Schettino Antonio , Widmann Andreas , SanMiguel Iria , Kotz Sonja A. , Schröger Erich 
Published: January 2018

AbstractSeveral theoretical and empirical studies suggest that attention and perceptual expectations influence perception in an interactive manner, whereby attentional gain is enhanced for predicted stimuli. The current study assessed whether attention and perceptual expectations interface when they are fully orthogonal, i.e., each of them relates to different stimulus features. We used a spatial cueing task with block-wise spatial attention cues that directed attention to either left or right visual field, in which Gabor gratings of either predicted (more likely) or unpredicted (less likely) orientation were presented. The lateralised posterior N1pc component was additively influenced by attention and perceptual expectations. Bayesian analysis showed no reliable evidence for the interactive effect of attention and expectations on the N1pc amplitude. However, attention and perceptual expectations interactively influenced the frontally distributed anterior N1 component (N1a). The attention effect (i.e., enhanced N1a amplitude in the attended compared to the unattended condition) was observed only for the gratings of predicted orientation, but not in the unpredicted condition. These findings suggest that attention and perceptual expectations interactively influence visual processing within 200 ms after stimulus onset and such joint influence may lead to enhanced endogenous attentional control in the dorsal fronto-parietal attention network.
Imaging 4D morphology and dynamics of mitral annulus in humans using cardiac cine MR feature tracking
Authors: Leng Shuang , Zhang Shuo , Jiang Meng , Zhao Xiaodan , Wu Rui , Allen John , He Ben , Tan Ru San , Zhong Liang 
Published: January 2018

AbstractFeature tracking in cine cardiac magnetic resonance (CMR) is a quantitative technique to assess heart structure and function. We investigated 4-dimensional (4D) dynamics and morphology of the mitral annulus (MA) using a novel tracking system based on radially rotational long-axis cine CMR series. A total of 30 normal controls and patients with mitral regurgitation were enrolled. The spatiotemporal changes of the MA were characterized by an in-house developed program. Dynamic and morphological parameters extracted from all 18 radial slices were used as references and were compared with those from subsequently generated sub-datasets with different degrees of sparsity. An excellent agreement was found among all datasets including routine 2-, 3- and 4-chamber views for MA dynamics such as peak systolic velocity (Sm) and mitral annular plane systolic excursion (MAPSE). MA morphology for size and shape was addressed adequately by as few as 6 radial slices, but poorly by only three routine views. Patients with regurgitation showed significantly reduced mitral dynamics and mild annular deformation, which was consistent between three routine views and 18 reference slices. In conclusion, feature tracking cine CMR provided a comprehensive and distinctive profile for 4D MA dynamics and morphology, which may help in studying different cardiac diseases.
Bace1-dependent amyloid processing regulates hypothalamic leptin sensitivity in obese mice
Authors: Meakin Paul J. , Jalicy Susan M. , Montagut Gemma , Allsop David J. P. , Cavellini Daniella L. , Irvine Stuart W. , McGinley Christopher , Liddell Mary K. , McNeilly Alison D. , Parmionova Karolina , Liu Yu-Ru , Bailey Charlotte L. S. , Dale J. Kim , Heisler Lora K. , McCrimmon Rory J. , Ashford Michael L. J. 
Published: January 2018

AbstractObesity places an enormous medical and economic burden on society. The principal driver appears to be central leptin resistance with hyperleptinemia. Accordingly, a compound that reverses or prevents leptin resistance should promote weight normalisation and improve glucose homeostasis. The protease Bace1 drives beta amyloid (Aβ) production with obesity elevating hypothalamic Bace1 activity and Aβ1–42 production. Pharmacological inhibition of Bace1 reduces body weight, improves glucose homeostasis and lowers plasma leptin in diet-induced obese (DIO) mice. These actions are not apparent in ob/ob or db/db mice, indicating the requirement for functional leptin signalling. Decreasing Bace1 activity normalises hypothalamic inflammation, lowers PTP1B and SOCS3 and restores hypothalamic leptin sensitivity and pSTAT3 response in obese mice, but does not affect leptin sensitivity in lean mice. Raising central Aβ1–42 levels in the early stage of DIO increases hypothalamic basal pSTAT3 and reduces the amplitude of the leptin pSTAT3 signal without increased inflammation. Thus, elevated Aβ1–42 promotes hypothalamic leptin resistance, which is associated with diminished whole-body sensitivity to exogenous leptin and exacerbated body weight gain in high fat fed mice. These results indicate that Bace1 inhibitors, currently in clinical trials for Alzheimer’s disease, may be useful agents for the treatment of obesity and associated diabetes.
A specific form of prefibrillar aggregates that functions as a precursor of amyloid nucleation
Authors: Yamamoto Naoki , Tsuhara Shoko , Tamura Atsuo , Chatani Eri 
Published: January 2018

AbstractNon-fibrillar protein aggregates that appear in the earlier stages of amyloid fibril formation are sometimes considered to play a key role in amyloid nucleation; however, the structural features of these aggregates currently remain unclear. We herein identified a characteristic pathway of fibril formation by human insulin B chain, in which two major species of prefibrillar aggregates were identified. Based on the time-resolved tracking of this pathway with far-UV circular dichroism (CD) spectroscopy, dynamic light scattering (DLS), and 1H-NMR spectroscopy, the first prefibrillar aggregate with a hydrodynamic diameter of approximately 70 nm accumulated concomitantly with the formation of a β-sheet structure, and the size further evolved to 130 nm with an additional structural development. These prefibrillar aggregates were metastable and survived at least 24 hours as long as they were maintained under quiescent conditions. The energy barrier for nucleation was overcome by shaking or even by applying a single short ultrasonic pulse. Furthermore, an investigation where nucleation efficiency was monitored by fibrillation rates with varying the timing of the ultrasonic-pulse treatment revealed that the second prefibrillar aggregate specifically produced amyloid nuclei. These results suggest that the second form of the prefibrillar aggregates acts as a direct precursor for the amyloid nucleation.
Genomic diversity and distribution of Bifidobacterium longum subsp. longum across the human lifespan
Authors: Odamaki Toshitaka , Bottacini Francesca , Kato Kumiko , Mitsuyama Eri , Yoshida Keisuke , Horigome Ayako , Xiao Jin-zhong , van Sinderen Douwe 
Published: January 2018

AbstractBifidobacterium longum subsp. longum represents one of the most prevalent bifidobacterial species in the infant, adult and elderly (human) gut. In the current study, we performed a comparative genome analysis involving 145 B. longum representatives, including 113 B. longum subsp. longum strains obtained from healthy Japanese subjects aged between 0 and 98 years. Although MCL clustering did not reveal any correlation between isolated strains and subject age, certain characteristics appear to be more prevalent among strains corresponding to specific host ages, such as genes involved in carbohydrate metabolism and environmental response. Remarkably, a substantial number of strains appeared to have been transmitted across family members, a phenomenon that was shown not to be confined to mother-infant pairs. This suggests that the ubiquitous distribution of B. longum subsp. longum across the human lifespan is at least partly due to extensive transmission between relatives. Our findings form a foundation for future research aimed at unraveling the mechanisms that allow B. longum strains to successfully transfer between human hosts, where they then colonize and persist in the gut environment throughout the host’s lifespan.
Ecological plasticity in the gastrointestinal microbiomes of Ethiopian Chlorocebus monkeys
Authors: Trosvik Pål , Rueness Eli K. , de Muinck Eric J. , Moges Amera , Mekonnen Addisu 
Published: January 2018

AbstractHuman activities can cause habitat degradation that may alter the types and quality of available food resources and thus influence the microbiomes of wild animal populations. Furthermore, seasonal shifts in food availability may cause adaptive responses in the gut microbiome to meet the need for different metabolic capabilities. Here, we demonstrate local-scale population structure in the gastrointestinal microbiotas of Chlorocebus monkeys, in southern Ethiopia, in response to varying degrees of human encroachment. We further provide evidence of adaptation to ecological conditions associated with the dry and wet seasons, and show seasonal effects to be more pronounced in areas with limited human activity. Finally, we report species-level microbiota differences between the endemic Ethiopian Bale monkey, an ecological specialist, and generalist Chlorocebus species from the same geographical region.
Mechanistic insights into remodeled Tau-derived PHF6 peptide fibrils by Naphthoquinone-Tryptophan hybrids
Authors: KrishnaKumar V. Guru , Paul Ashim , Gazit Ehud , Segal Daniel 
Published: January 2018

AbstractIntra-cellular tau protein tangles and extra-cellular β-amyloid plaques are hallmarks of Alzheimer’s disease (AD), characterized by the conversion of natively unfolded monomeric protein/peptide into misfolded β-sheet rich aggregates. Therefore, inhibiting the aggregation cascade or disassembling the pre-formed aggregates becomes a pivotal event in disease treatment. In the present study, we show that Naphthoquinone-Tryptophan hybrids, i.e., NQTrp and Cl-NQTrp significantly disrupted the pre-formed fibrillar aggregates of Tau-derived PHF6 (VQIVYK) peptide and full-length tau proteinin vitro, in a dose-dependent manner as evident from ThS assay, CD spectroscopy, and TEM. Molecular dynamics simulation of PHF6 oligomers and fibrils with the Naphthoquinone-Tryptophan hybrids provides a possible structure-function based mechanism-of-action, highlighting the role of hydrophobic interaction and hydrogen bond formation during fibril disassembly. These findings signify the effectiveness of NQTrp and Cl-NQTrp in disassembling fibrillar aggregates and may help in designing novel hybrid molecules for AD treatment.
Application of variable selection in the origin discrimination of Wolfiporia cocos (F.A. Wolf) Ryvarden & Gilb. based on near infrared spectroscopy
Authors: Yuan Tianjun , Zhao Yanli , Zhang Ji , Wang Yuanzhong 
Published: January 2018

AbstractDried sclerotium of Wolfiporia cocos (F.A. Wolf) Ryvarden & Gilb. is a traditional Chinese medicine. Its chemical components showed difference among geographical origins, which made it difficult to keep therapeutic potency consistent. The identification of the geographical origin of W. cocos is the fundamental prerequisite for its worldwide recognition and acceptance. Four variable selection methods were employed for near infrared spectroscopy (NIR) variable selection and the characteristic variables were screened for the establishment of Fisher function models in further identification of the origin of W. cocos from Yunnan, China. For the obvious differences between poriae cutis (fu-ling-pi in Chinese, or FLP) and the inner part (bai-fu-ling in Chinese, or BFL) of the sclerotia of W. cocos in the pattern space of principal component analysis (PCA), we established discriminant models for FLP and BFL separately. Through variable selection, the models were significant improved and also the models were simplified by using only a small part of the variables. The characteristic variables were screened (13 for BFL and 10 for FLP) to build Fisher discriminant function models and the validation results showed the models were reliable and effective. Additionally, the characteristic variables were interpreted.
Association of BAP with urinary albumin excretion in postmenopausal, but not premenopausal, non-CKD Japanese women
Authors: Ozaki Etsuko , Yamada Shinsuke , Kuriyama Nagato , Matsui Daisuke , Watanabe Isao , Koyama Teruhide , Imanishi Yasuo , Inaba Masaaki , Watanabe Yoshiyuki 
Published: January 2018

AbstractWe investigated whether the phosphate (Pi) load in the circulation causes renal damage in non-CKD women. This cross-sectional study included 1,094 non-CKD Japanese women. Fibroblast growth factor (FGF)-23 as a parameter for the Pi load, bone alkaline phosphatase (BAP) as a bone metabolic marker, and the urinary albumin-to-creatinine ratio (UACR) as an early marker for renal damage were measured. Postmenopausal women exhibited significantly higher levels of serum Pi, FGF-23, BAP, and UACR and significantly lower eGFR than premenopausal women. In postmenopausal women, a multiple regression analysis confirmed a correlation between serum BAP and log UACR. In premenopausal women, although serum FGF-23 did not correlate with log UACR, a multiple regression analysis revealed that FGF-23 correlated with log UACR. Based on the i ncrease observed in BAP and its close relationship with log UACR in postmenopausal women, the release of Pi from bone may be linked to the systemic circulation of Pi, which has the potential to induce renal and vascular damage. Therefore, serum FGF-23 may be a useful marker for renal and vascular damage in premenopausal women; however, it currently remains unclear whether FGF-23 by itself or as a surrogate marker for the Pi load induces damage in the kidney and/or vasculature.
CLIQ-BID: A method to quantify bacteria-induced damage to eukaryotic cells by automated live-imaging of bright nuclei
Authors: Wallez Yann , Bouillot Stéphanie , Soleilhac Emmanuelle , Huber Philippe , Attrée Ina , Faudry Eric 
Published: January 2018

AbstractPathogenic bacteria induce eukaryotic cell damage which range from discrete modifications of signalling pathways, to morphological alterations and even to cell death. Accurate quantitative detection of these events is necessary for studying host-pathogen interactions and for developing strategies to protect host organisms from bacterial infections. Investigation of morphological changes is cumbersome and not adapted to high-throughput and kinetics measurements. Here, we describe a simple and cost-effective method based on automated analysis of live cells with stained nuclei, which allows real-time quantification of bacteria-induced eukaryotic cell damage at single-cell resolution. We demonstrate that this automated high-throughput microscopy approach permits screening of libraries composed of interference-RNA, bacterial strains, antibodies and chemical compounds in ex vivo infection settings. The use of fluorescently-labelled bacteria enables the concomitant detection of changes in bacterial growth. Using this method named CLIQ-BID (Cell Live Imaging Quantification of Bacteria Induced Damage), we were able to distinguish the virulence profiles of different pathogenic bacterial species and clinical strains.
Plasmonic waveguide design for the enhanced forward stimulated brillouin scattering in diamond
Authors: Liu Qiang , Bibbó Luigi , Albin Sacharia , Wang Qiong , Lin Mi , Lu Huihui , Ouyang Zhengbiao 
Published: January 2018

AbstractWe propose a scheme of metal/dielectric/metal waveguide for the enhanced forward stimulated Brillouin scattering (FSBS) in diamond that is mediated by gap surface plasmons. Numerical results based on finite-element method show that the maximum Brillouin gain in the small gap (~100 nm) can exceed 106 W−1 m−1, which is three orders of magnitude higher than that in diamond-only waveguides. It is found that the radiation pressure that exists at the boundaries of metal and diamond plays a dominant role in contributing to the enhanced forward stimulated Brillouin gain, although electrostrictive forces interfere destructively. Detailed study shows that high FSBS gain can still be obtained regardless of the photoelastic property of the dielectric material in the proposed plasmonic waveguide. The strong photon-phonon coupling in this gap-surface-plasmon waveguide may make our design useful in the development of phonon laser, RF wave generation and optomechanical information processing in quantum system.
Choroidal vascularity index in type-2 diabetes analyzed by swept-source optical coherence tomography
Authors: Kim Mirinae , Ha Min Ji , Choi Seung Yong , Park Young-Hoon 
Published: January 2018

AbstractThe relationships between changes in choroidal vasculature and the severity of diabetic retinopathy (DR) remain unclear. We assessed choroidal changes in diabetic patients by measuring choroidal vascularity index (CVI) in conjunction with DR stage. In this study, patients with diabetes and healthy controls were retrospectively analyzed. Subjects were divided into seven groups as follows: Healthy controls, no DR, mild/moderate non-proliferative DR (NPDR), severe NPDR, proliferative DR (PDR), panretinal photocoagulation-treated DR, and clinically significant macular edema. The mean CVI values in the above groups were 69.08, 67.07, 66.28, 66.20, 63.48, 65.38, and 66.28, respectively. The eyes of diabetic patients exhibited a significantly lower CVI value than those of healthy controls even without DR. The PDR group exhibited a significantly lower CVI value than the healthy control, no DR, and mild/moderate NPDR groups. Age, sex, disease duration, glycated hemoglobin, fasting blood sugar, or intraocular pressure had no correlation with CVI. In multivariate regression analysis, thicker subfoveal choroid and thinner central retina were significantly associated with higher CVI values. These findings carefully suggest that changes in choroidal vasculature could be the primary event in diabetes even where there is no DR.
Evidence for a radiation-responsive ‘p53 gateway’ contributing significantly to the radioresistance of lepidopteran insect cells
Authors: Kumar Ashish , Chandna Sudhir 
Published: January 2018

AbstractRecently, we have demonstrated that microRNA-31 (miR-31) overexpression is inherent to radiation-induced cell death in the highly radioresistant Sf9 insect cells, and regulates pro-apoptotic Bax translocation to mitochondria. In the present study, we report that at sub-lethal radiation doses for Sf9 cells, miR-31 is significantly downregulated and is tightly regulated by an unusual mechanism involving p53. While ectopic overexpression of a well-conserved Sfp53 caused typical apoptosis, radiation-induced p53 accumulation observed selectively at sub-lethal doses failed to induce cell death. Further investigation of this paradoxical response revealed an intriguing phenomenon that sub-lethal radiation doses result in accumulation of a ‘hyper-phosphorylated’ Sfp53, which in turn binds to miR-31 genomic location and suppresses its expression to prevent cell death. Interestingly, priming cells with sub-lethal doses even prevented the apoptosis induced by lethal radiation or ectopic Sfp53 overexpression. On the other hand, silencing p53 increased radiation-induced cell death by inhibiting miR-31 downregulation. This study thus shows the existence of a unique radiation-responsive ‘p53 gateway’ preventing miR-31-mediated apoptosis in Sf9 cells. Since Sfp53 has a good functional homology with human p53, this study may have significant implications for effectively modulating the mammalian cell radioresistance.
Vitamin A and E Nutritional Status in Relation to Leptin, Adiponectin, IGF-I and IGF-II in Early Life - a Birth Cohort Study
Authors: Du Qinwen , Luo Zhong-Cheng , Nuyt Anne Monique , Audibert Francois , Julien Pierre , Wei Shu-Qin , Zhang Dan-Li , Fraser William , Levy Emile 
Published: January 2018

AbstractThe metabolic health effects of vitamin A and E nutritional status in early life are largely unknown. We assessed whether vitamin A and vitamin E nutritional status may affect circulating leptin, adiponectin, insulin-like growth factor (IGF)-I and IGF-II levels in early life in humans. In a singleton birth cohort (n = 248), vitamin A and E nutritional status in fetuses/newborns were assessed by cord plasma concentrations of retinol, β-carotene, α- and γ-tocopherols. The primary outcomes were cord plasma leptin, adiponectin, IGF-I and IGF-II concentrations. Cord plasma retinol was significantly positively correlated to IGF-I in girls (r = 0.42, P < 0.0001) but not in boys (r = 0.14, P = 0.11). Adjusting for maternal and newborn’s characteristics, one log unit increase in cord plasma retinol was associated with a 28.0% (95% CI: 11.1–47.5%) increase in IGF-I in girls (P < 0.001) but not in boys (P = 0.75). One log unit increment in cord plasma α-tocopherol was associated with a 6.6% (0.4–12.3%) decrease in adiponectin (P = 0.04), while one log unit increment in cord plasma γ-tocopherol was associated with a 21.2% (4.7–34.8%) decrease in leptin (P = 0.01). There may be a sex-specific association between retinol and IGF-I, a negative association between α-tocopherol and adiponectin, and a negative association between γ-tocopherol and leptin in early life in humans.
Blockade of soluble epoxide hydrolase attenuates post-ischemic neuronal hyperexcitation and confers resilience against stroke with TrkB activation
Authors: Chang Li-Hsin , Lin Hui-Ching , Huang Shiang-Suo , Chen I-Chih , Chu Kai-Wen , Chih Chun-Lien , Liang Yao-Wen , Lee Yi-Chung , Chen You-Yin , Lee Yi-Hsuan , Lee I-Hui 
Published: January 2018

AbstractInhibition and deletion of soluble epoxide hydrolase (sEH) has been suggested to ameliorate infarction in experimental ischemic stroke possibly via vasoactive epoxyeicosatrienoic acids. However, it is unknown whether the neuroprotective mechanisms involve alteration of post-ischemic neuronal transmission and neurotrophic signaling. We used a permanent middle cerebral artery occlusion (MCAO) model in adult wild-type mice with the sEH inhibitor 12-(3-adamantan-1-yl-ureido)dodecanoic acid (AUDA) post-treatment and in sEH knockout (sEH KO) mice. We found that sensorimotor recovery was significantly enhanced after MCAO in both AUDA-treated and sEH KO mice, with decreased sEH activity and brain infarction. Decreased post-ischemic long-term potentiation (iLTP) was observed in an ex vivo hippocampal oxygen-glucose deprivation model. Tropomyosin receptor kinase B (TrkB) activation, rather than glutamate receptor alteration, was consistently found after the different manipulations. Immunohistochemistry further revealed peri-infarct neuronal TrkB activation and microvasculature augmentation in AUDA-treated and sEH KO mice, suggesting parallel neurovascular enhancement. Mechanistically, pretreatment with a selective TrkB antagonist ANA12 countered the effect of iLTP attenuation induced by sEH deletion ex vivo and abolished the infarct reduction in vivo. Together, the neuroprotective effects of sEH inhibition and gene deletion can both be mediated partially via enhancement of TrkB signaling which attenuated post-ischemic neuroexcitation and neurological deficits.