bluuebunny/crossref_metadata_2025_split huggingface dataset:
CXCL1 mediates obesity-associated adipose stromal cell trafficking and function in the tumour microenvironment
Authors: Zhang Tao , Tseng Chieh , Zhang Yan , Sirin Olga , Corn Paul G. , Li-Ning-Tapia Elsa M. , Troncoso Patricia , Davis John , Pettaway Curtis , Ward John , Frazier Marsha L. , Logothetis Christopher , Kolonin Mikhail G. 
Published: May 2016

AbstractWhite adipose tissue (WAT) overgrowth in obesity is linked with increased aggressiveness of certain cancers. Adipose stromal cells (ASCs) can become mobilized from WAT, recruited by tumours and promote cancer progression. Mechanisms underlying ASC trafficking are unclear. Here we demonstrate that chemokines CXCL1 and CXCL8 chemoattract ASC by signalling through their receptors, CXCR1 and CXCR2, in cell culture models. We further show that obese patients with prostate cancer have increased epithelial CXCL1 expression. Concomitantly, we observe that cells with ASC phenotype are mobilized and infiltrate tumours in obese patients. Using mouse models, we show that the CXCL1 chemokine gradient is required for the obesity-dependent tumour ASC recruitment, vascularization and tumour growth promotion. We demonstrate that αSMA expression in ASCs is induced by chemokine signalling and mediates the stimulatory effects of ASCs on endothelial cells. Our data suggest that ASC recruitment to tumours, driven by CXCL1 and CXCL8, promotes prostate cancer progression.
An asteroidal origin for water in the Moon
Authors: Barnes Jessica J. , Kring David A. , Tartèse Romain , Franchi Ian A. , Anand Mahesh , Russell Sara S. 
Published: May 2016

AbstractThe Apollo-derived tenet of an anhydrous Moon has been contested following measurement of water in several lunar samples that require water to be present in the lunar interior. However, significant uncertainties exist regarding the flux, sources and timing of water delivery to the Moon. Here we address those fundamental issues by constraining the mass of water accreted to the Moon and modelling the relative proportions of asteroidal and cometary sources for water that are consistent with measured isotopic compositions of lunar samples. We determine that a combination of carbonaceous chondrite-type materials were responsible for the majority of water (and nitrogen) delivered to the Earth–Moon system. Crucially, we conclude that comets containing water enriched in deuterium contributed significantly <20% of the water in the Moon. Therefore, our work places important constraints on the types of objects impacting the Moon ∼4.5–4.3 billion years ago and on the origin of water in the inner Solar System.
BK channels in microglia are required for morphine-induced hyperalgesia
Authors: Hayashi Yoshinori , Morinaga Saori , Zhang Jing , Satoh Yasushi , Meredith Andrea L. , Nakata Takahiro , Wu Zhou , Kohsaka Shinichi , Inoue Kazuhide , Nakanishi Hiroshi 
Published: May 2016

AbstractAlthough morphine is a gold standard medication, long-term opioid use is associated with serious side effects, such as morphine-induced hyperalgesia (MIH) and anti-nociceptive tolerance. Microglia-to-neuron signalling is critically involved in pain hypersensitivity. However, molecules that control microglial cellular state under chronic morphine treatment remain unknown. Here we show that the microglia-specific subtype of Ca2+-activated K+ (BK) channel is responsible for generation of MIH and anti-nociceptive tolerance. We find that, after chronic morphine administration, an increase in arachidonic acid levels through the μ-opioid receptors leads to the sole activation of microglial BK channels in the spinal cord. Silencing BK channel auxiliary β3 subunit significantly attenuates the generation of MIH and anti-nociceptive tolerance, and increases neurotransmission after chronic morphine administration. Therefore, microglia-specific BK channels contribute to the generation of MIH and anti-nociceptive tolerance.
Aurora-A recruitment and centrosomal maturation are regulated by a Golgi-activated pool of Src during G2
Authors: Barretta Maria Luisa , Spano Daniela , D’Ambrosio Chiara , Cervigni Romina Ines , Scaloni Andrea , Corda Daniela , Colanzi Antonino 
Published: May 2016

AbstractThe Golgi apparatus is composed of stacks of cisternae laterally connected by tubules to form a ribbon-like structure. At the onset of mitosis, the Golgi ribbon is broken down into discrete stacks, which then undergo further fragmentation. This ribbon cleavage is required for G2/M transition, which thus indicates that a ‘Golgi mitotic checkpoint’ couples Golgi inheritance with cell cycle transition. We previously showed that the Golgi-checkpoint regulates the centrosomal recruitment of the mitotic kinase Aurora-A; however, how the Golgi unlinking regulates this recruitment was unknown. Here we show that, in G2, Aurora-A recruitment is promoted by activated Src at the Golgi. Our data provide evidence that Src and Aurora-A interact upon Golgi ribbon fragmentation; Src phosphorylates Aurora-A at tyrosine 148 and this specific phosphorylation is required for Aurora-A localization at the centrosomes. This process, pivotal for centrosome maturation, is a fundamental prerequisite for proper spindle formation and chromosome segregation.
Elastase levels and activity are increased in dystrophic muscle and impair myoblast cell survival, proliferation and differentiation
Authors: Arecco N. , Clarke C. J. , Jones F. K. , Simpson D. M. , Mason D. , Beynon R. J. , Pisconti A. 
Published: May 2016

AbstractIn Duchenne muscular dystrophy, progressive loss of muscle tissue is accompanied by fibrosis, chronic inflammation and reduced muscle regenerative capacity. Although much is known about the development of fibrosis and chronic inflammation in muscular dystrophy, less is known about how they are mechanistically linked to loss of muscle regenerative capacity. We have developed a proteomics method to discover dystrophy-associated changes in the muscle progenitor cell niche, which identified serine proteases, and especially neutrophil elastase, as candidates. We show that elastase activity is increased in dystrophic (mdx4cv) muscle and impairs myoblast survival in culture. While the effect of elastase on C2C12 cell survival correlates with the kinetics of elastase-mediated degradation of the substrate to which the cells adhere, the effect of elastase on satellite cell-derived primary myoblast growth and differentiation is substrate-independent and even more dramatic than the effect on C2C12 cells, suggesting a detrimental role for elastase on myogenesis in vivo. Additionally, elastase impairs differentiation of both primary and C2C12 myoblasts into myotubes. Our findings evidence the importance of neutrophil-mediated inflammation in muscular dystrophy and indicate elastase-mediated regulation of myoblast behaviour as a potential mechanism underlying loss of regenerative capacity in dystrophic muscle.
A highly soluble, non-phototoxic, non-fluorescent blebbistatin derivative
Authors: Várkuti Boglárka H. , Képiró Miklós , Horváth István Ádám , Végner László , Ráti Szilvia , Zsigmond Áron , Hegyi György , Lenkei Zsolt , Varga Máté , Málnási-Csizmadia András 
Published: May 2016

AbstractBlebbistatin is a commonly used molecular tool for the specific inhibition of various myosin II isoforms both in vitro and in vivo. Despite its popularity, the use of blebbistatin is hindered by its poor water-solubility (below 10 micromolar in aqueous buffer) and blue-light sensitivity, resulting in the photoconversion of the molecule, causing severe cellular phototoxicity in addition to its cytotoxicity. Furthermore, blebbistatin forms insoluble aggregates in water-based media above 10 micromolar with extremely high fluorescence and also high adherence to different types of surfaces, which biases its experimental usage. Here, we report a highly soluble (440 micromolar in aqueous buffer), non-fluorescent and photostable C15 amino-substituted derivative of blebbistatin, called para-aminoblebbistatin. Importantly, it is neither photo- nor cytotoxic, as demonstrated on HeLa cells and zebrafish embryos. Additionally, para-aminoblebbistatin bears similar myosin II inhibitory properties to blebbistatin or para-nitroblebbistatin (not to be confused with the C7 substituted nitroblebbistatin), tested on rabbit skeletal muscle myosin S1 and on M2 and HeLa cells. Due to its drastically improved solubility and photochemical feature, as well as lack of photo- or cytotoxicity, para-aminoblebbistatin may become a feasible replacement for blebbistatin, especially at applications when high concentrations of the inhibitor or blue light irradiation is required.
PPP Sliding Window Algorithm and Its Application in Deformation Monitoring
Authors: Song Weiwei , Zhang Rui , Yao Yibin , Liu Yanyan , Hu Yuming 
Published: May 2016

AbstractCompared with the double-difference relative positioning method, the precise point positioning (PPP) algorithm can avoid the selection of a static reference station and directly measure the three-dimensional position changes at the observation site and exhibit superiority in a variety of deformation monitoring applications. However, because of the influence of various observing errors, the accuracy of PPP is generally at the cm-dm level, which cannot meet the requirements needed for high precision deformation monitoring. For most of the monitoring applications, the observation stations maintain stationary, which can be provided as a priori constraint information. In this paper, a new PPP algorithm based on a sliding window was proposed to improve the positioning accuracy. Firstly, data from IGS tracking station was processed using both traditional and new PPP algorithm; the results showed that the new algorithm can effectively improve positioning accuracy, especially for the elevation direction. Then, an earthquake simulation platform was used to simulate an earthquake event; the results illustrated that the new algorithm can effectively detect the vibrations change of a reference station during an earthquake. At last, the observed Wenchuan earthquake experimental results showed that the new algorithm was feasible to monitor the real earthquakes and provide early-warning alerts.
Connexin43 contributes to electrotonic conduction across scar tissue in the intact heart
Authors: Mahoney Vanessa M. , Mezzano Valeria , Mirams Gary R. , Maass Karen , Li Zhen , Cerrone Marina , Vasquez Carolina , Bapat Aneesh , Delmar Mario , Morley Gregory E. 
Published: May 2016

AbstractStudies have demonstrated non-myocytes, including fibroblasts, can electrically couple to myocytes in culture. However, evidence demonstrating current can passively spread across scar tissue in the intact heart remains elusive. We hypothesize electrotonic conduction occurs across non-myocyte gaps in the heart and is partly mediated by Connexin43 (Cx43). We investigated whether non-myocytes in ventricular scar tissue are electrically connected to surrounding myocardial tissue in wild type and fibroblast-specific protein-1 driven conditional Cx43 knock-out mice (Cx43fsp1KO). Electrical coupling between the scar and uninjured myocardium was demonstrated by injecting current into the myocardium and recording depolarization in the scar through optical mapping. Coupling was significantly reduced in Cx43fsp1KO hearts. Voltage signals were recorded using microelectrodes from control scars but no signals were obtained from Cx43fsp1KO hearts. Recordings showed significantly decreased amplitude, depolarized resting membrane potential, increased duration and reduced upstroke velocity compared to surrounding myocytes, suggesting that the non-excitable cells in the scar closely follow myocyte action potentials. These results were further validated by mathematical simulations. Optical mapping demonstrated that current delivered within the scar could induce activation of the surrounding myocardium. These data demonstrate non-myocytes in the scar are electrically coupled to myocytes and coupling depends on Cx43 expression.
An Improved Method for High Quality Metagenomics DNA Extraction from Human and Environmental Samples
Authors: Bag Satyabrata , Saha Bipasa , Mehta Ojasvi , Anbumani D. , Kumar Naveen , Dayal Mayanka , Pant Archana , Kumar Pawan , Saxena Shruti , Allin Kristine H. , Hansen Torben , Arumugam Manimozhiyan , Vestergaard Henrik , Pedersen Oluf , Pereira Verima , Abraham Philip , Tripathi Reva , Wadhwa Nitya , Bhatnagar Shinjini , Prakash Visvanathan Gnana , Radha Venkatesan , Anjana R. M. , Mohan V. , Takeda Kiyoshi , Kurakawa Takashi , Nair G. Balakrish , Das Bhabatosh 
Published: May 2016

AbstractTo explore the natural microbial community of any ecosystems by high-resolution molecular approaches including next generation sequencing, it is extremely important to develop a sensitive and reproducible DNA extraction method that facilitate isolation of microbial DNA of sufficient purity and quantity from culturable and uncultured microbial species living in that environment. Proper lysis of heterogeneous community microbial cells without damaging their genomes is a major challenge. In this study, we have developed an improved method for extraction of community DNA from different environmental and human origin samples. We introduced a combination of physical, chemical and mechanical lysis methods for proper lysis of microbial inhabitants. The community microbial DNA was precipitated by using salt and organic solvent. Both the quality and quantity of isolated DNA was compared with the existing methodologies and the supremacy of our method was confirmed. Maximum recovery of genomic DNA in the absence of substantial amount of impurities made the method convenient for nucleic acid extraction. The nucleic acids obtained using this method are suitable for different downstream applications. This improved method has been named as the THSTI method to depict the Institute where the method was developed.
Preserved Nephrogenesis Following Partial Nephrectomy in Early Neonates
Authors: Kirita Yuhei , Kami Daisuke , Ishida Ryo , Adachi Takaomi , Tamagaki Keiichi , Matoba Satoaki , Kusaba Tetsuro , Gojo Satoshi 
Published: May 2016

AbstractReconstitution of total nephron segments after resection in the adult kidney has not been achieved; however, whether the neonatal kidney can maintain the capacity for neo-nephrogenesis after resection is unknown. We performed partial resection of the kidney in neonatal rats on postnatal days 1 (P1x kidney) and 4 (P4x kidney) and examined morphological changes and relevant factors. The P1x kidney bulged into the newly formed cortex from the wound edge, while nephrogenesis failure was prominent in the P4x kidney. Twenty-eight days post-resection, the glomerular number, cortex area, and collecting duct were preserved in the P1x kidney, whereas these parameters were markedly decreased in the P4x kidney. During normal development, Six2 expression and Six2+ nephron progenitor cells in the cap mesenchyme both rapidly disappear after birth. However, time course analysis for the P1x kidney showed that Six2 expression and Six2+ cells were well preserved in the tissue surrounding the resected area even 2 days after resection. In conclusion, our results indicate that kidneys in early neonate rats retain the capability for neo-nephrogenesis after resection; however, this ability is lost soon after birth, which may be attributed to a declining amount of Six2+ cells.
Protective efficacy and safety of liver stage attenuated malaria parasites
Authors: Kumar Hirdesh , Sattler Julia Magdalena , Singer Mirko , Heiss Kirsten , Reinig Miriam , Hammerschmidt-Kamper Christiane , Heussler Volker , Mueller Ann-Kristin , Frischknecht Friedrich 
Published: May 2016

AbstractDuring the clinically silent liver stage of a Plasmodium infection the parasite replicates from a single sporozoite into thousands of merozoites. Infection of humans and rodents with large numbers of sporozoites that arrest their development within the liver can cause sterile protection from subsequent infections. Disruption of genes essential for liver stage development of rodent malaria parasites has yielded a number of attenuated parasite strains. A key question to this end is how increased attenuation relates to vaccine efficacy. Here, we generated rodent malaria parasite lines that arrest during liver stage development and probed the impact of multiple gene deletions on attenuation and protective efficacy. In contrast to P. berghei strain ANKA LISP2(–) or uis3(–) single knockout parasites, which occasionally caused breakthrough infections, the double mutant lacking both genes was completely attenuated even when high numbers of sporozoites were administered. However, different vaccination protocols showed that LISP2(–) parasites protected better than uis3(–) and double mutants. Hence, deletion of several genes can yield increased safety but might come at the cost of protective efficacy.
Ring-Shaped Microlanes and Chemical Barriers as a Platform for Probing Single-Cell Migration
Authors: Schreiber Christoph , Segerer Felix J. , Wagner Ernst , Roidl Andreas , Rädler Joachim O. 
Published: May 2016

AbstractQuantification and discrimination of pharmaceutical and disease-related effects on cell migration requires detailed characterization of single-cell motility. In this context, micropatterned substrates that constrain cells within defined geometries facilitate quantitative readout of locomotion. Here, we study quasi-one-dimensional cell migration in ring-shaped microlanes. We observe bimodal behavior in form of alternating states of directional migration (run state) and reorientation (rest state). Both states show exponential lifetime distributions with characteristic persistence times, which, together with the cell velocity in the run state, provide a set of parameters that succinctly describe cell motion. By introducing PEGylated barriers of different widths into the lane, we extend this description by quantifying the effects of abrupt changes in substrate chemistry on migrating cells. The transit probability decreases exponentially as a function of barrier width, thus specifying a characteristic penetration depth of the leading lamellipodia. Applying this fingerprint-like characterization of cell motion, we compare different cell lines and demonstrate that the cancer drug candidate salinomycin affects transit probability and resting time, but not run time or run velocity. Hence, the presented assay allows to assess multiple migration-related parameters, permits detailed characterization of cell motility and has potential applications in cell biology and advanced drug screening.
Clinical outcomes after assisted reproductive technology in twin pregnancies: chorionicity-based comparison
Authors: Sun Luming , Zou Gang , Wei Xing , Chen Yan , Zhang Jun , Okun Nanette , Duan Tao 
Published: May 2016

AbstractThe chorionicity–based evaluation of the perinatal risk in twin pregnancies after assisted reproductive technology (ART) is lacking. A retrospective review was performed of all twin pregnancies monitored prenatally and delivered at our hospital between 2010 and 2014. Chorionicity was diagnosed by ultrasound examination at first trimester and confirmed by postnatal pathology. Pregnancy and perinatal outcomes were prospectively recorded. Adjusted odds ratios (aOR) with 95% confidence intervals (CI) were calculated in a logistic regression model. A total of 1153 twin pregnancies were analyzed. The occurrence of preterm premature rupture of membranes (PPROM) was 3 times as frequent in monochorionic diamniotic (MCDA) twin pregnancies after ART as in those spontaneous counterparts (aOR 3.0; 95%CI 1.1–3.2). The prevalence of intrahepatic cholestasis of pregnancies (ICP) was significantly higher in dichorionic diamniotic (DCDA) twin pregnancies following ART compared to spontaneous DCDA pregnancies (aOR 3.3; 95%CI 1.3–5.6). Perinatal outcomes did not differ between two conception methods, either in MCDA or DCDA twin pregnancies. Based on differentiation of chorionicity, ART is associated with the increased risk of PPROM in MCDA twin pregnancies and with a higher rate of ICP in DCDA twin gestations. ART does not increase adversity of perinatal outcomes in twin pregnancies.
Early pancreatic islet fate and maturation is controlled through RBP-Jκ
Authors: Cras-Méneur Corentin , Conlon Megan , Zhang Yaqing , Pasca Di Magliano Marina , Bernal-Mizrachi Ernesto 
Published: May 2016

AbstractNotch signaling is known to control early pancreatic differentiation through Ngn3 repression. In later stages, downstream of Notch, the Presenilins are still required to maintain the endocrine fate allocation. Amongst their multiple targets, it remains unclear which one actually controls the maintenance of the fate of the early islets. Conditional deletions of the Notch effector RBP-Jκ with lineage tracing in Presenilin-deficient endocrine progenitors, demonstrated that this factor is central to the control of the fate through a non-canonical Notch mechanism. RBP-Jκ mice exhibit normal islet morphogenesis and function, however, a fraction of the progenitors fails to differentiate and develop into disorganized masses resembling acinar to ductal metaplasia and chronic pancreatitis. A subsequent deletion of RBP-Jκ in forming β-cells led to the transdifferentiation into the other endocrine cells types, indicating that this factor still mediates the maintenance of the fate within the endocrine lineage itself. These results highlight the dual importance of Notch signaling for the endocrine lineage. Even after Ngn3 expression, Notch activity is required to maintain both fate and maturation of the Ngn3 progenitors. In a subset of the cells, these alterations of Notch signaling halt their differentiation and leads to acinar to ductal metaplasia.
Understanding cold bias: Variable response of skeletal Sr/Ca to seawater pCO2 in acclimated massive Porites corals
Authors: Cole Catherine , Finch Adrian , Hintz Christopher , Hintz Kenneth , Allison Nicola 
Published: May 2016

AbstractCoral skeletal Sr/Ca is a palaeothermometer commonly used to produce high resolution seasonal sea surface temperature (SST) records and to investigate the amplitude and frequency of ENSO and interdecadal climate events. The proxy relationship is typically calibrated by matching seasonal SST and skeletal Sr/Ca maxima and minima in modern corals. Applying these calibrations to fossil corals assumes that the temperature sensitivity of skeletal Sr/Ca is conserved, despite substantial changes in seawater carbonate chemistry between the modern and glacial ocean. We present Sr/Ca analyses of 3 genotypes of massive Porites spp. corals (the genus most commonly used for palaeoclimate reconstruction), cultured under seawater pCO2 reflecting modern, future (year 2100) and last glacial maximum (LGM) conditions. Skeletal Sr/Ca is indistinguishable between duplicate colonies of the same genotype cultured under the same conditions, but varies significantly in response to seawater pCO2 in two genotypes of Porites lutea, whilst Porites murrayensis is unaffected. Within P. lutea, the response is not systematic: skeletal Sr/Ca increases significantly (by 2–4%) at high seawater pCO2 relative to modern in both genotypes and also increases significantly (by 4%) at low seawater pCO2 in one genotype. This magnitude of variation equates to errors in reconstructed SST of up to −5 °C.