bluuebunny/crossref_metadata_2025_split huggingface dataset:
Towards a Fuller Assessment of Gastric Motility in Patients With Upper GI Dyspepsia: Time to Accommodate!
Authors: Maurer Alan H. , Parkman Henry P. 
Published: November 2018

Abstract:
There is increasing recognition of the importance of assessing patients with unexplained upper gastrointestinal symptoms for impaired gastric accommodation. New therapeutic approaches to treat impaired accommodation are being developed. This increasing interest in diagnosing and treating impaired gastric accommodation emphasizes the need to have a clinically available method to measure the gastric accommodation response. In this editorial, gastric accommodation is discussed along with the currently available methods for its assessment. We summarize our thoughts on what are the next steps needed to make a readily accessible method for assessing gastric accommodation more widely available.
Influence of mouth breathing on outcome of scaling and root planing in chronic periodontitis
Authors: Kaur Manpreet , Sharma Rajinder Kumar , Tewari Shikha , Narula Satish Chander 
Published: November 2018

Abstract
Introduction
Dryness is known to be associated with inflammatory diseases such as dry eye disease and atopic dermatitis. There is significant water loss from the oral cavity during mouth breathing. This study is conducted to estimate the influence of mouth breathing on the outcome of scaling and root planing (SRP) in chronic periodontitis (CP).

Materials and methods
CP patients comprising of 33 mouth breathers (MBs) and 33 nose breathers (NBs) were recruited. Thirty patients in each group completed the study. At baseline, plaque index (PI), gingival index (GI), bleeding on probing (BOP), probing depth (PD), and clinical attachment level (CAL) were measured. SRP was done in both groups. At the 4th, 8th, and 12th week, PI, GI, and BOP were recorded. PD and CAL were also assessed at the 12th week.

Results
At the 12th week, there was significantly less improvement in GI at palatal sites of maxillary anterior and maxillary posterior teeth in MB group. Sixty-nine percent of BOP positive sites with PD >4 mm were converted into BOP negative sites with PD ≤4 mm in maxillary posterior palatal sites in NB. This success was 38% in MB.

Conclusion
Control of periodontal inflammation by SRP in CP patients is affected at palatal sites of mouth breathers.
Interpreting clinical trial data in multiple myeloma: translating findings to the real-world setting
Authors: Richardson Paul G. , San Miguel Jesus F. , Moreau Philippe , Hajek Roman , Dimopoulos Meletios A. , Laubach Jacob P. , Palumbo Antonio , Luptakova Katarina , Romanus Dorothy , Skacel Tomas , Kumar Shaji K. , Anderson Kenneth C. 
Published: November 2018

AbstractSubstantial improvements in survival have been seen in multiple myeloma (MM) over recent years, associated with the introduction and widespread use of multiple novel agents and regimens, as well as the emerging treatment paradigm of continuous or long-term therapy. However, these therapies and approaches may have limitations in the community setting, associated with toxicity burden, patient burden, and other factors including cost. Consequently, despite improvements in efficacy in the rigorously controlled clinical trials setting, the same results are not always achieved in real-world practice. Furthermore, the large number of different treatment options and regimens under investigation in various MM settings precludes the feasibility of obtaining head-to-head clinical trial data, and there is a temptation to use cross-trial comparisons to evaluate data across regimens. However, multiple aspects, including patient-related, disease-related, and treatment-related factors, can influence clinical trial outcomes and lead to differences between studies that may confound direct comparisons between data. In this review, we explore the various factors requiring attention when evaluating clinical trial data across available agents/regimens, as well as other considerations that may impact the translation of these findings into everyday MM management. We also investigate discrepancies between clinical trial efficacy and real-world effectiveness through a literature review of non-clinical trial data in relapsed/refractory MM on novel agent−based regimens and evaluate these data in the context of phase 3 trial results for recently approved and commonly used regimens. We thereby demonstrate the complexity of interpreting data across clinical studies in MM, as well as between clinical studies and routine-care analyses, with the aim to help clinicians consider all the necessary issues when tailoring individual patients’ treatment approaches.
NUMB maintains bone mass by promoting degradation of PTEN and GLI1 via ubiquitination in osteoblasts
Authors: Ye Ling , Lou Feng , Yu Fanyuan , Zhang Demao , Wang Chenglin , Wu Fanzi , Li Xin , Ping Yilin , Yang Xiao , Yang Jing , Chen Dian , Gao Bo , Huang Dingming , Liu Peng 
Published: November 2018

AbstractThe adaptor protein NUMB is involved in asymmetric division and cell fate determination and recognized as an antagonist of Notch. Previous studies have proved that Notch activation in osteoblasts contributes to a high bone mass. In this study, however, an osteopenic phenotype was found in 9-week-old mice using osteoblastic specific Col1a1–2.3-Cre to ablate both Numb and its homologue Numbl . The trabecular bone mass decreased dramatically while the cortical bone mass was unaffected. Here, the Notch signal was not activated, while the tensin homologue deleted on human chromosome 10 (PTEN), which dephosphorylates phosphatidylinositide 3-kinases, was elevated, attenuating protein kinase B (Akt). The ubiquitination assay revealed that NUMB may physiologically promote PTEN ubiquitination in the presence of neural precursor cell-expressed developmentally downregulated protein 4–1. In addition, the deficiency of Numb/Numbl also activated the Hedgehog pathway through GLI1. This process was found to improve the ratio of the receptor activator of nuclear factor-kB ligand to osteoprotegerin, which enhanced the differentiation of osteoclasts and bone resorption . In conclusion, this study provides an insight into new functons of NUMB and NUMBL on bone homeostasis.
Organic field-effect optical waveguides
Authors: Zhao Guangyao , Dong Huanli , Liao Qing , Jiang Jun , Luo Yi , Fu Hongbing , Hu Wenping 
Published: November 2018

AbstractIntegrating electronics and photonics is critically important for the realization of high-density and high-speed optoelectronic circuits. However, it remains challenging to achieve this target due to the difficulty of merging many different areas of science and technology. Here, we show an organic integrated optoelectronic device, namely, organic field-effect optical waveguide, integrating field-effect transistor and optical waveguide together. In such device, the propagation of optical waveguide in the active organic semiconductor can be tuned by the third terminal—the gate electrode of transistor, giving a controllable modulation depth as high as 70% and 50% in parallel and perpendicular directions of charge transport versus optical waveguide, respectively. Also, the optical waveguide with different directions can turn the field-effect of the device with the photodependence ratio up to 14800. The successful integration of active field-effect transistor with semiconductor waveguide modulator expands opportunities for creating scalable integration of electronics and photonics in a chip.
Clinical relevance of screening checklists for detecting cancer predisposition syndromes in Asian childhood tumours
Authors: Chan Sock Hoai , Chew Winston , Ishak Nur Diana Binte , Lim Weng Khong , Li Shao-Tzu , Tan Sheng Hui , Teo Jing Xian , Shaw Tarryn , Chang Kenneth , Chen Yong , Iyer Prasad , Tan Enrica Ee Kar , Seng Michaela Su-Fern , Chan Mei Yoke , Tan Ah Moy , Low Sharon Yin Yee , Soh Shui Yen , Loh Amos Hong Pheng , Ngeow Joanne 
Published: November 2018

AbstractAssessment of cancer predisposition syndromes (CPS) in childhood tumours is challenging to paediatric oncologists due to inconsistent recognizable clinical phenotypes and family histories, especially in cohorts with unknown prevalence of germline mutations. Screening checklists were developed to facilitate CPS detection in paediatric patients; however, their clinical value have yet been validated. Our study aims to assess the utility of clinical screening checklists validated by genetic sequencing in an Asian cohort of childhood tumours. We evaluated 102 patients under age 18 years recruited over a period of 31 months. Patient records were reviewed against two published checklists and germline mutations in 100 cancer-associated genes were profiled through a combination of whole-exome sequencing and multiplex ligation-dependent probe amplification on blood-derived genomic DNA. Pathogenic germline mutations were identified in ten (10%) patients across six known cancer predisposition genes: TP53, DICER1, NF1, FH, SDHD and VHL. Fifty-four (53%) patients screened positive on both checklists, including all ten pathogenic germline carriers. TP53 was most frequently mutated, affecting five children with adrenocortical carcinoma, sarcomas and diffuse astrocytoma. Disparity in prevalence of germline mutations across tumour types suggested variable genetic susceptibility and implied potential contribution of novel susceptibility genes. Only five (50%) children with pathogenic germline mutations had a family history of cancer. We conclude that CPS screening checklists are adequately sensitive to detect at-risk children and are relevant for clinical application. In addition, our study showed that 10% of Asian paediatric solid tumours have a heritable component, consistent with other populations.
Fast response paper based visual color change gas sensor for efficient ammonia detection at room temperature
Authors: Maity Avisek , Ghosh Barnali 
Published: November 2018

AbstractWe show that a cheap, disposable type rapid paper sensor (working at room temperature) can be made using perovskite halide CH3NH3PbI3 (MAPI) to detect presence of the toxic ammonia gas (NH3)by just color change, where the black colored MAPI film (on the paper) changes to yellow color in presence of a very low concentration of NH3 gas. The sensor can detect presence of NH3 gas in open or closed atmosphere down to around 10 ppm with a response time of nearly 10 sec which decreases to few seconds when the concentration exceeds 20 ppm. The easy to fabricate sensor paper being a visual sensor does not need any other extra equipment for its operation. The sensor is not sensitive to moisture with RH upto 90% and does not also respond to gases like Methane (CH4), Nitrous Oxide (N2O), Carbon dioxide (CO2) etc in the test chamber each up to a concentration of 500 ppm. Conversion/decomposition of MAPI to PbI2 on exposure to NH3 has been proposed as the mechanism of color change and the mechanism has been established using a collection of techniques like XRD, EDX, UV-Visible absorption and Photo Luminescence.
Ultrafast air bonding between SiC ceramic and SnAgTi alloy under the action of ultrasounds
Authors: Wu Bingzhi , Leng Xuesong , Xiu Ziyang , Yan Jiuchun 
Published: November 2018

AbstractWith the aim of overcoming the limitations of traditional soldering ceramic methods for power device packaging, a simple but ultrafast bonding technology is reported. The effect and mechanism of ultrasonic action on the interfacial bonding and microstructure is investigated and thoroughly discussed. An ultrafast interfacial bond between SiC ceramics and SnAgTi active solder has been successfully achieved through a reaction at the interface at a low temperature of 250 °C in the extremely short time. High-resolution transmission electron microscopy (HRTEM) revealed that a silica layer on the surface of SiC reacted with Ti from the SnAgTi active solder to form a nanometer-thickness amorphous titania layer at the interface under the ultrasonic action, which creates an exceptional interfacial structure and facilitates bonding between the two dissimilar crystals. A discontinuous titania layer at the interface was identified within 0.1 s. With further increasing ultrasonic action time to 1 s, a continuous titania layer with a thickness of 7.6 ± 0.5 nm formed at the interface. A new interfacial reaction mechanism was revealed and it was found that ultrasound accelerated the reaction of liquid active solder/ceramic. Our finding demonstrated that ultrasound could be an effective approach for joining ceramics which is difficult to wet by a liquid metal at low temperature. The combined impact of ultrasonic cavitation and streaming dominated the mechanism and kinetics of the rapid interfacial reaction.
Multigenerational impacts of bile exposure are mediated by TGR5 signaling pathways
Authors: Baptissart Marine , Sèdes Lauriane , Holota Hélène , Thirouard Laura , Martinot Emmanuelle , de Haze Angélique , Rouaisnel Betty , Caira Françoise , Beaudoin Claude , Volle David H. 
Published: November 2018

AbstractBesides their well-known roles in digestion and fat solubilization, bile acids (BAs) have been described as signaling molecules activating the nuclear receptor Farnesoid-X-receptor (FXRα) or the G-protein-coupled bile acid receptor-1 (GPBAR-1 or TGR5). In previous reports, we showed that BAs decrease male fertility due to abnormalities of the germ cell lineage dependent on Tgr5 signaling pathways. In the presentstudy, we tested whether BA exposure could impact germ cell DNA integrity leading to potential implications for progeny. For that purpose, adult F0 male mice were fed a diet supplemented with cholic acid (CA) or the corresponding control diet during 3.5 months prior mating. F1 progeny from CA exposed founders showed higher perinatal lethality, impaired BA homeostasis and reduced postnatal growth, as well as altered glucose metabolism in later life. The majority of these phenotypic traits were maintained up to the F2 generation. In F0 sperm cells, differential DNA methylation associated with CA exposure may contribute to the initial programming of developmental and metabolic defects observed in F1 and F2 offspring. Tgr5 knock-out mice combined with in vitro strategies defined the critical role of paternal Tgr5 dependent pathways in the multigenerational impacts of ancestral CA exposure.
Changes in bursal B cells in chicken during embryonic development and early life after hatching
Authors: Ko Kwang Hyun , Lee In Kyu , Kim Girak , Gu Min Jeong , Kim Hyun Young , Park Byung-Chul , Park Tae Sub , Han Seung Hyun , Yun Cheol-Heui 
Published: November 2018

AbstractThe bursa of Fabricius, the primary lymphoid organ for B cell development found only in birds, offers novel approaches to study B cell differentiation at various developmental stages. Here, we explored the changes and mechanism involved in the developmental stages of bursal B cells. The bursal B cells rapidly increased in the late embryonic stage and around hatching, which coincided with changes in specific cell surface markers. Moreover, the cells in the bursa were divided by size into small (low forward- and side-scatter) or large (high forward- and side-scatter) via flow cytometry. It is intriguing that the proportion of small and large B cells was reversed during this period. Because little is known about this phenomenon, we hypothesized that size-based B cell population could be used as an indicator to distinguish their status and stage during B cell development in chicken. The results demonstrated that large B cells are actively proliferating cells than small B cells. Additionally, large B cells showed higher mRNA expression of both proliferation- and differentiation-associated genes compared to small B cells. Taken together, these data show that large bursal B cells are the main source of proliferation and differentiation during B cell development in chickens.
Cytoplasmic Pin1 expression is increased in human cutaneous melanoma and predicts poor prognosis
Authors: Chen Xin , Liu Xiaosong , Deng Bin , Martinka Magdalena , Zhou Youwen , Lan Xiaopeng , Cheng Yabin 
Published: November 2018

AbstractThe prolyl isomerase Pin1 is widely over-expressed or over-activated in cancers and promotes tumorigenesis. The authors investigated the expression level of Pin1 and analyzed the prognostic value of Pin1 expression using a large-scale melanoma tissue microarray study. Two independent sets of tissue microarrays were employed, including 114 melanoma cases in the discovery set and 424 in the validation set (538 cases in total), 32 normal nevi and 86 dysplastic nevi 118 cases of nevi. The subcellular Pin1 expression in different stages of melanocytic lesions and its prognostic significance were studied. High expression (IRS 0–8) of cytoplasmic Pin1 was observed in 3.13%, 8.33%, 16.49% and 22.76% of the biopsies in normal nevi, dysplastic nevi, primary melanoma and metastatic melanoma, respectively. Significant differences for cytoplasmic Pin1 staining were observed between normal nevi and metastatic melanoma (P = 0.011, χ2 test), between dysplastic nevi and primary melanoma (P = 0.046, χ2 test) and between dysplastic nevi and metastatic melanoma (P = 0.016, χ2 test). Kaplan-Meier survival analysis showed that increased cytoplasmic Pin1 expression was associated with a worse 5-year melanoma-specific survival of melanoma (P < 0.001) and metastatic melanoma patients (P = 0.004). Multivariate Cox regression analysis showed that cytoplasmic Pin1 expression is an independent prognostic factor in melanoma. Our data indicate that cytoplasmic Pin1 plays an important role in melanoma pathogenesis and progression, and serve as a potential prognostic marker for melanoma.
Adipose-derived stem cells alleviate liver apoptosis induced by ischemia-reperfusion and laparoscopic hepatectomy in swine
Authors: Ge Yansong , Zhang Qianzhen , Li Hui , Bai Ge , Jiao Zhihui , Wang Hongbin 
Published: November 2018

AbstractHepatic ischemia-reperfusion (I/R) injury is inevitable during hepatectomy and may cause both postoperative morbidity and mortality. Regenerative medicine suggested adipose-derived stem cells (ADSCs) as an attractive tool for the treatment of liver diseases. In this study, we investigated the effect of ADSCs in an I/R model combined with laparoscopic hepatectomy in swine. Eighteen Bama miniature pigs were randomly divided into Sham, IRI, and ADSCs groups. ADSCs (1 × 106/kg) were injected through liver parenchyma immediately after hemihepatectomy. The apoptosis-related role of ADSCs was studied. The results showed that ADSCs transplantation reduced both pathological and ultrastructural changes and decreased the number of apoptotic-positive cells. In the ADSCs group, Fas, Fas ligand (FasL) protein, and mRNA were downregulated and the enzyme activities of Caspase3, Caspase8, and Caspase9 were significantly decreased. In addition, ADSC therapy significantly increased the ratio of Bcl-2/Bax protein and mRNA compared to the IRI group. In conclusion, ADSCs attenuated both I/R and hepatectomy-induced liver apoptosis in a porcine model, and offers a potential therapeutic option for hepatic I/R and hepatectomy.
A biomimicry design for nanoscale radiative cooling applications inspired by Morpho didius butterfly
Authors: Didari Azadeh , Mengüç M. Pinar 
Published: November 2018

AbstractIn nature, novel colors and patterns have evolved in various species for survival, recognizability or mating purposes. Investigations of the morphology of various butterfly wings have shown that in addition to the pigmentation, micro and nanostructures within the wings have also allowed better communication systems and the pheromone-producing organs which are the main regulators of the temperature within butterfly wings. Within the blue spectrum (450–495 nm), Morpho didius butterfly exhibit iridescence in their structure-based wings’ color. Inspired by the rich physics behind this concept, we present a designer metamaterial system that has the potential to be used for near-field radiative cooling applications. This biomimicry design involves SiC palm tree-like structures placed in close proximity of a thin film in a vacuum environment separated by nanoscale gaps. The near-field energy exchange is enhanced significantly by decreasing the dimensions of the tree and rotating the free-standing structure by 90 degrees clockwise and bringing it to the close proximity of a second thin film. This exchange is calculated by using newly developed near-field radiative transfer finite difference time domain (NF-RT-FDTD) algorithm. Several orders of enhancement of near-field heat flux within the infrared atmospheric window (8–13 μm bandwidth) are achieved. This spectrally selective enhancement is associated with the geometric variations, the spatial location of the source of excitation and the material characteristics, and can be tuned to tailor strong radiative cooling mechanisms.
Molecular modelling of mitofusin 2 for a prediction for Charcot-Marie-Tooth 2A clinical severity
Authors: Beręsewicz Małgorzata , Charzewski Łukasz , Krzyśko Krystiana A. , Kochański Andrzej , Zabłocka Barbara 
Published: November 2018

AbstractCharcot-Marie-Tooth disease type 2A (CMT2A) is an autosomal dominant neuropathy caused by mutations in the mitofusin 2 gene (MFN2). More than 100MFN2gene mutations have been reported so far, with majority located within the GTPase domain encoding region. These domain-specific mutations present wide range of symptoms with differences associated with distinct amino acid substitutions in the same position. Due to the lack of conclusive phenotype-genotype correlation the predictive value of genetic results remains still limited. We have explored whether changes in the protein structure caused byMFN2mutations can help to explain diseases phenotypes. Using a stable protein model, we evaluated the effect of 26 substitutions on the MFN2 structure and predicted the molecular consequences of such alterations. The observed changes were correlated with clinical features associated with a given mutation. Of all tested mutations positive correlation of molecular modelling with the clinical features reached 73%. Our analysis revealed that molecular modelling of mitofusin 2 mutations is a powerful tool, which predicts associated pathogenic impacts and that these correlate with clinical outcomes. This approach may aid an early diagnosis and prediction of symptoms severity in CMT2A patients.
Estimation of the ion-trap assisted electrical loads and resulting BBR shift
Authors: Sharma Lakhi , Roy A. , Panja S. , Ojha V. N. , De S. 
Published: November 2018

AbstractCapacitive, inductive and resistive loads of an ion-trap system, which can be modelled as LCR circuits, are important to know for building a high accuracy experiment. Accurate estimation of these loads is necessary for delivering the desired radio frequency (RF) signal to an ion trap via an RF resonator. Of particular relevance to the trapped ion optical atomic clock, determination of these loads lead to accurate evaluation of the Black-Body Radiation (BBR) shift resulting from the inaccurate machining of the ion-trap itself. We have identified different sources of these loads and estimated their values using analytical and finite element analysis methods, which are found to be well in agreement with the experimentally measured values. For our trap geometry, we obtained values of the effective inductive, capacitive and resistive loads as: 3.1 μH, 3.71 (1) μH, 3.68 (6) μH; 50.4 pF, 51.4 (7) pF, 40.7 (2) pF; and 1.373 Ω, 1.273 (3) Ω, 1.183 (9) Ω by using analytical, numerical and experimental methods, respectively. The BBR shift induced by the excess capacitive load arising due to machining inaccuracy in the RF carrying parts has been accurately estimated, which results to a fractional frequency shift of 6.6 × 10−17 for an RF of 1 kV at 2π × 15 MHz and with ±10 μm machining inaccuracy. This needs to be incorporated into the total systematic uncertainty budget of a frequency standard as it is about one order of magnitude higher than the present precision of the trapped ion optical clocks.