bluuebunny/crossref_metadata_2025_split huggingface dataset:
On the non-dissipative orbital evolution of a binary system comprising non-compact components with misaligned spin and orbital angular momenta
Authors: Lazovik Y A , Ivanov P B , Papaloizou J C B 
Published: November 2024

ABSTRACT
In this paper, we determine the non-dissipative tidal evolution of a close binary system with an arbitrary eccentricity in which the spin angular momenta of both components are misaligned with the orbital angular momentum. We focus on the situation where the orbital angular momentum dominates the spin angular momenta and so remains at small inclination to the conserved total angular momentum. Torques arising from rotational distortion and tidal distortion taking account of Coriolis forces are included. This extends the previous work of Ivanov & Papaloizou relaxing the limitation resulting from the assumption that one of the components is compact and has zero spin angular momentum. Unlike the above study, the evolution of spin–orbit inclination angles is driven by both types of torque. We develop a simple analytic theory describing the evolution of orbital angles and compare it with direct numerical simulations. We find that the tidal torque prevails near ‘critical curves’ in parameter space where the time-averaged apsidal precession rate is close to zero. In the limit of small spin, these curves exist only for systems that have at least one component with retrograde rotation. As in our previous work, we find solutions close to these curves for which the apsidal angle librates. As noted there, this could result in oscillation between prograde and retrograde states. We consider the application of our approach to systems with parameters similar to those of the misaligned binary DI Her.
Constraining the AGN formation channel for detected black hole binary mergers up to z = 1.5 with the Quaia catalogue
Authors: Veronesi Niccolò , van Velzen Sjoert , Rossi Elena Maria , Storey-Fisher Kate 
Published: November 2024

ABSTRACT
Statistical analyses based on the spatial correlation between the sky maps of gravitational wave (GW) events and the positions of potential host environments are a powerful tool to infer the origin of the black hole binary mergers that have been detected by the LIGO, Virgo, and KAGRA instruments. In this paper, we tighten our previous constraints on the fraction of detected GW events that may have originated from active galactic nuclei (AGNs). We consider 159 mergers detected not later than 1st June, 2024, and the all-sky quasar catalogue Quaia. We increase by a factor of 5.3 and 114, the number of considered GW sources and AGN, respectively, also extending our analysis from redshift 0.3 to 1.5. This is possible thanks to the uniformity of the AGN catalogue and its high level of completeness, which we estimate as a function of redshift and luminosity. We find at a 95 per cent credibility level that un-obscured AGN with a bolometric luminosity higher than $10^{44.5}\,{\rm erg\ s}^{-1}$ ($10^{45}\,{\rm erg\ s}^{-1}$) do not contribute to more than the 21 (11) per cent of the detected GW events.
SPathDB: a comprehensive database of spatial pathway activity atlas
Authors: Li Feng , Song Xinyu , Fan Wenli , Pei Liying , Liu Jiaqi , Zhao Rui , Zhang Yifang , Li Mengyue , Song Kaiyue , Sun Yu , Zhang Chunlong , Zhang Yunpeng , Xu Yanjun 
Published: November 2024

Abstract
Spatial transcriptomics sequencing technology deepens our understanding of the diversity of cell behaviors, fates and states within complex tissue, which is often determined by the fine-tuning of regulatory network functional activities. Therefore, characterizing the functional activity within tissue space is helpful for revealing the functional features that drive spatial heterogeneity, and understanding complex biological processes. Here, we describe a database, SPathDB (http://bio-bigdata.hrbmu.edu.cn/SPathDB/), which aims to dissect the pathway-mediated multidimensional spatial heterogeneity in the context of functional activity. We manually curated spatial transcriptomics datasets and biological pathways from public data resources. SPathDB consists of 1689 868 spatial spots of 695 slices from 84 spatial transcriptome datasets of human and mouse, which involves 36 tissues, and also diseases such as cancer, and provides interactive analysis and visualization of the functional activities of 114 998 pathways across these spatial spots. SPathDB provides five flexible interfaces to retrieve and analyze pathways with highly variable functional activity across spatial spots, the distribution of pathway functional activities along pseudo-space axis, pathway-mediated spatial intercellular communications and the associations between spatial pathway functional activity and the occurrence of cell types. SPathDB will serve as a foundational resource for identifying functional features and elucidating underlying mechanisms of spatial heterogeneity.
RASP v2.0: an updated atlas for RNA structure probing data
Authors: Mu Kunting , Fei Yuhan , Xu Yiran , Zhang Qiangfeng Cliff 
Published: November 2024

Abstract
RNA molecules function in numerous biological processes by folding into intricate structures. Here we present RASP v2.0, an updated database for RNA structure probing data featuring a substantially expanded collection of datasets along with enhanced online structural analysis functionalities. Compared to the previous version, RASP v2.0 includes the following improvements: (i) the number of RNA structure datasets has increased from 156 to 438, comprising 216 transcriptome-wide RNA structure datasets, 141 target-specific RNA structure datasets, and 81 RNA–RNA interaction datasets, thereby broadening species coverage from 18 to 24, (ii) a deep learning-based model has been implemented to impute missing structural signals for 59 transcriptome-wide RNA structure datasets with low structure score coverage, significantly enhancing data quality, particularly for low-abundance RNAs, (iii) three new online analysis modules have been deployed to assist RNA structure studies, including missing structure score imputation, RNA secondary and tertiary structure prediction, and RNA binding protein (RBP) binding prediction. By providing a resource of much more comprehensive RNA structure data, RASP v2.0 is poised to facilitate the exploration of RNA structure-function relationships across diverse biological processes. RASP v2.0 is freely accessible at http://rasp2.zhanglab.net/.
Integration of transcriptional and epigenetic regulation of TFEB reveals its dual functional roles in Pan-cancer
Authors: Luo Jing-Fang , Wang Shijia , Fu Jiajing , Xu Peng , Shao Ningyi , Lu Jia-Hong , Ming Chen 
Published: November 2024

Abstract
Transcription factor EB (TFEB) mainly regulates the autophagy-lysosomal pathway, associated with many diseases, including cancer. However, the role of TFEB in pan-cancer has not been investigated systematically. In this study, we comprehensively analyzed TFEB targets under three stresses in Hela cells by cross-validation of RNA-seq and ChIP-seq. 1712 novel TFEB targets have not been reported in the Gene Set Enrichment Analysis and ChIP Enrichment Analysis databases. We further investigated their distributions and roles among the pan-cancer co-expression networks across 32 cancers constructed by multiscale embedded gene co-expression network analysis (MEGENA) based on the Cancer Genome Atlas (TCGA) cohort. Specifically, TFEB might serve as a hidden player with multifaceted functions in regulating pan-cancer risk factors, e.g. CXCL2, PKMYT1 and BUB1, associated with cell cycle and immunosuppression. TFEB might also regulate protective factors, e.g. CD79A, related to immune promotion in the tumor microenvironment. We further developed a Shiny app website to present the comprehensive regulatory targets of TFEB under various stimuli, intending to support further research on TFEB functions. Summarily, we provided references for the TFEB downstream targets responding to three stresses and the dual roles of TFEB and its targets in pan-cancer, which are promising anticancer targets that warrant further exploration.
Snus and Cardiometabolic Health Markers Among Swedish Young Adults
Authors: Zettergren Anna , Andersson Niklas , Pershagen Göran , Lindh Christian , Georgelis Antonios , Kull Inger , Melén Erik , Ekström Sandra , Ljungman Petter , Bergström Anna 
Published: November 2024

Abstract

Introduction
Snus is suggested as a risk factor for cardiometabolic disease, but little is known about health effects in young populations, particularly in women. We aimed to investigate associations between snus and cardiometabolic health markers among young men and women.

Aims and Methods
This study was conducted within the BAMSE (Swedish acronym for Children, Allergy, Environment, Stockholm, Epidemiology) birth cohort and included participants followed up around 24 years (n = 2256) and 26 years (n = 1011). Snus use was assessed at 24 years by questionnaires. Cardiometabolic health markers were recorded at clinical examinations at 24 and 26 years. Associations between snus use and cardiometabolic markers were assessed by multivariable linear regression.

Results
Snus was used by 6.4% (n = 81) among women and 21.9% (n = 219) among men. Compared to no tobacco use, daily exclusive snus use among women at 24 years was associated with higher body mass index (BMI) (adjusted β: 1.93 kg/m2, 95% confidence interval [CI] = 0.54, 3.33) and waist circumference (WC) (aβ: 3.80 cm, 95% CI = 0.41, 7.18) at 24 years, and with higher BMI (aβ: 2.73 kg/m2, 95% CI = 0.53 to 4.93) at 26 years. Among men, using ≥4 cans/week was associated with increased BMI (aβ: 2.48 kg/m2, 95% CI = 0.73, 4.24) and a tendency toward increased body fat (aβ: 2.31%, 95% CI = −0.53, 5.14) at 26 years. Snus use was not associated with glycemic status or blood pressure.

Conclusions
Our results suggest that snus is associated with increased BMI, and possibly other measures of adiposity, among young women and heavy-using young men. Given the cross-sectional study design, the results should be interpreted with caution.

Implications
We found cross-sectional associations between snus use and measures of increased adiposity in a cohort of Swedish young adults, including BMI and WC among women and BMI among heavy snus-using men. We did not find associations between snus use and body fat %, glycemic status, or blood pressure. This is one of few studies to investigate the health effect of snus among both women and men as well as cardiometabolic health markers in young adults. Given the recent trends of increased snus use among young adults, our findings highlight the need for further research on snus on cardiometabolic health.
Effect of Nutrition Education During Pregnancy on Iron–Folic Acid Supplementation Compliance and Anemia in Low- and Middle-Income Countries: A Systematic Review and Meta-analysis
Authors: Engidaw Melaku Tadege , Lee Patricia , Fekadu Gelana , Mondal Prasenjit , Ahmed Faruk 
Published: November 2024

Abstract

Context
Stakeholders implement nutrition education to prevent and control anemia during pregnancy. Nutrition education during pregnancy can increase the consumption of iron–folic acid (IFA) supplements and encourage behavioral changes. However, there is no comprehensive meta-analysis to determine the effectiveness of this intervention.

Objective
This review aimed to determine the effect of nutrition education on IFA supplementation (IFAS) compliance, hemoglobin level change, and prevalence of anemia in low- and middle-income countries.

Data Sources
The systematic searches on Ovid Medline, Scopus, Embase (Elsevier), Web of Science, Health and Medical Collection (ProQuest), and Google Scholar were conducted until September 11, 2023. The updated searches were performed on November 16, 2023.

Data Extraction
In total, 12 436 records were imported to Covidence. Of these, 9109 records were screened by title and abstract. A total of 112 records were evaluated in full, and 53 articles were ultimately included based on eligibility.

Results
Fifty-three peer-reviewed research articles met the inclusion criteria, involving 13 475 pregnant women. Those who received nutrition education during pregnancy were 2.80 times more likely to comply with IFAS (odds ratio = 2.80; 95% CI: 2.04, 3.83; I2 = 66.20%). There was an average increase of 0.88 g/dL (Cohen’s d = 0.88; 95% CI: 0.63, 1.13; I2 = 96.17%) in hemoglobin levels among women who received nutrition education. A meta-regression analysis revealed that 61.85% (adjusted R2 = 61.85%) of heterogeneity between standardized mean differences was explained by anemia status, intervention duration, and geographic region. Also, pregnant women in the nutrition education group had a 34% (relative risk = 0.66; 95% CI: 0.54, 0.80, I2 = 86.85%) lower risk of anemia compared with the control group.

Conclusion
Nutrition education during pregnancy improves compliance with IFAS, increases hemoglobin levels, and reduces the risk of anemia. Therefore, it is crucial to enhance the existing nutrition education program to prevent and control anemia during pregnancy.

Systematic Review Registration
PROSPERO registration no. CRD42023454241.
Migratory mixing of Gallinago delicata (Wilson’s Snipe) in wintering areas highlights the need for international coordination for monitoring and management
Authors: Carpenter Bobbi G , Campbell Caitlin J , Fanning Andrew , McBride Mark 
Published: November 2024

ABSTRACT
Determining migratory connectivity is essential to understanding population dynamics and managing and conserving migratory species. Gallinago delicata (Wilson’s Snipe) is a widely hunted wetland bird distributed throughout North America and parts of South America with little known regarding migratory strategy, connectivity, or population trends. Here, we used stable hydrogen isotope analysis of feathers to identify breeding areas and determine the degree of migratory mixing of 323 G. delicata harvested in Florida during the nonbreeding season. Our results demonstrate a high degree of migratory mixing between breeding and nonbreeding seasons and provide evidence that breeding birds from throughout Canada and the northwestern United States migrate to Florida. We also found evidence of long-distance migration across both latitudinal and longitudinal bands, with 104 individuals traveling from breeding grounds in western Canada or Alaska to nonbreeding habitat in Florida; the farthest-traveling individual likely migrated at least 4,270 km. Our findings highlight the crucial role of active and coordinated monitoring and management of the widely harvested G. delicata, which as long-distance migrants are disproportionately vulnerable to global environmental change.
Moralism without populism? The salience of corruption in the electoral manifestos and legislature speeches of Czech and Slovak parties
Authors: Michal Aleš 
Published: November 2024

Abstract
Corruption remains a significant political issue in Central Europe. This article examines its salience in political discourse in Czechia and Slovakia, where recent anti-corruption campaigns have seen considerable success. Utilizing data from the Comparative Manifesto Project, ParlSpeech, and Slovak Parliamentary TV, the study finds that an oppositional stance is the primary predictor for frequent mentions of corruption rather than the anticipated role of populism. Populist parties then emphasize the issue more in parliamentary speeches than in their campaign promotions, though some specific nuances among different populist subtypes.
EARLY FLOWERING 3 alleles affect the temperature responsiveness of the circadian clock in Chinese cabbage
Authors: Wang Shan , Feng Daling , Zheng Yakun , Lu Yin , Shi Kailin , Yang Rui , Ma Wei , Li Na , Liu Mengyang , Wang Yanhua , Hong Yiguo , McClung C Robertson , Zhao Jianjun 
Published: November 2024

Abstract
Temperature is an environmental cue that entrains the circadian clock, adapting it to local thermal and photoperiodic conditions that characterize different geographic regions. Circadian clock thermal adaptation in leafy vegetables such as Chinese cabbage (Brassica rapa ssp. pekinensis) is poorly understood but essential to sustain and increase vegetable production under changing climates. We investigated circadian rhythmicity in natural Chinese cabbage accessions grown at 14, 20, and 28 °C. The circadian period was significantly shorter at 20 °C than at either 14 or 28 °C, and the responses to increasing temperature and temperature compensation (Q10) were associated with population structure. Genome-wide association studies mapping identified variation responsible for temperature compensation as measured by Q10 value for temperature increase from 20 to 28 °C. Haplotype analysis indicated that B. rapa EARLY FLOWERING 3 H1 Allele (BrELF3H1) conferred a significantly higher Q10 value at 20 to 28 °C than BrELF3H2. Co-segregation analyses of an F2 population derived from a BrELF3H1 × BrELF3H2 cross revealed that variation among BrELF3 alleles determined variation in the circadian period of Chinese cabbage at 20 °C. However, their differential impact on circadian oscillation was attenuated at 28 °C. Transgenic complementation in Arabidopsis thaliana elf3-8 mutants validated the involvement of BrELF3 in the circadian clock response to thermal cues, with BrELF3H1 conferring a higher Q10 value than BrELF3 H2 at 20 to 28 °C. Thus, BrELF3 is critical to the circadian clock response to ambient temperature in Chinese cabbage. These findings have clear implications for breeding new varieties with enhanced resilience to extreme temperatures.
Infiltration depth, rooting depth, and regolith flushing—A global perspective
Authors: Fan Ying , Miguez-Macho Gonzalo 
Published: November 2024

Abstract
In the vegetation root zone, infiltration (Inf) parts in two directions with distinct Earth-system functions. One goes up as evapotranspiration (E + Tr), returning Inf to the atmosphere (short-circuiting) and affecting short-term weather/climate and the carbon cycle. The other goes down as deep drainage (DD), flushing the regolith, mobilizing nutrients/contaminates and dissolved minerals into aquifers and rivers, eventually reaching the ocean (long-circuiting) thus regulating global biogeochemical cycles and long-term climate. We ask, what is the modern-day global structure in short- vs. long-circuiting? What forces and feedbacks create such structures? Synthesizing site-studies aided by global modeling, we found that: (i) long-circuiting prevails in evenly wet climates, in well-drained landscapes with a deep vadose zone, in substrates with deep conduits, and with plant biomass below natural equilibrium; (ii) soil B-horizons, via geochemical and vegetation feedbacks, enhance short-circuiting, while deep rock fractures enable long-circuiting even in dry climates; (iii) in dry climate/season and in uplands, plant roots follow Inf into deep vadose zone to tap wet-season Inf; (iv) plant water-use reinforces shallow Inf, reducing DD and regolith flushing in dry and season-dry climates; (v) where short-circuiting prevails, a dry soil zone separates modern surface processes from fossil groundwater; and (vi) the E + Tr supply depth, regolith flushing rate, and groundwater residence time vary greatly across the land, arising from multiscale drivers/feedbacks among climate, drainage, substrate, and biomass. These findings link site-based process discoveries to Earth-system level structures and functions of water belowground, shedding light on where/when/how the infiltrated rain influences the atmosphere above or the ocean downstream.
Productive policing: Lessons from preventative police strategies in times of New Public Management
Authors: Foshaugen Marina Hiller , Vestad Maja 
Published: November 2024

Abstract
Police patrol work intersects the global trends of both crime prevention strategies and New Public Management (NPM). Based on a case study conducted among operative policing units in the Norwegian nighttime economy, we canvass lessons from environments in which the tensions that arise from reactive and proactive police strategies are particularly evident. The emphasis on measurable and quantifiable tasks in line with NPM principles, coupled with the pressures to perform according to an overall strategy of crime prevention, present challenges for proactive policing conducted at street-level. The practical implications of this strategic duality are discussed. We suggest that the notion of productive policing sits at the core of this tension as a way of producing both order and quantifiable outcomes.
Performance Evaluation of Electron Multiplier Tubes as a High-Intensity Muon Beam Monitor of Accelerator Neutrino Experiments
Authors: Honjo Takashi , Ashida Yosuke , Auersperg-Castell Oderich F , Friend Megan , Heitkamp Ian , Ichikawa Atsuko K , Ishitsuka Masaki , Izumi Nao , Kasama Sohei , Kashiwagi Shigeru , Kawamura Yuma , Kikawa Tatsuya , Kobata Takuya , Matsubara Tsunayuki , Miyabe Manabu , Nakamura Kiseki D , Nakamura Hina , Sato Yukine , Sakashita Ken , Seiya Yoshihiro , Takifuji Kouichi , Tokiyasu Atsushi , Yamamoto Tatsuya , Yamamoto Kazuhiro , Yasutome Kenji 
Published: November 2024

Abstract
Upgrade work towards increasing the beam intensity of the neutrino beamline at the Japan Proton Accelerator Research Complex (J-PARC) is underway. Monitoring tertiary muon beams is essential for stable operation of the beamline. Accordingly, we plan to replace the present muon monitor sensors with electron multiplier tubes (EMTs). We investigated the radiation tolerance and linearity response of EMTs using a 90 MeV electron beam. EMTs were irradiated with electrons up to 470 nC. EMTs show higher radiation tolerance than the Si sensors which are presently used as one of the muon monitor detectors for the Tokai-to-Kamioka (T2K) long-baseline neutrino experiment at J-PARC. The integrated charge yield decrease is found to be less than 8% after a beam irradiation equivalent to 132 days of operation at the future J-PARC beam power of 1.3 MW. The EMTs show linearity better than $\pm$5% up to the future beam intensity. The observed yield decrease is likely due to dynode deterioration, based on detailed investigation. The studies described here confirm that EMTs can be used as a high-intensity muon beam monitor. Owing to the reported results, we are proceeding with the installation in the J-PARC neutrino beamline.
Exactly Solvable Inhomogeneous Fermion Systems
Authors: Sasaki Ryu 
Published: November 2024

Abstract
15 exactly solvable inhomogeneous (spinless) fermion systems on 1D lattices are constructed explicitly based on the discrete orthogonal polynomials of the Askey scheme, e.g. Krawtchouk, Hahn, Racah, Meixner, and q-Racah polynomials. The Schrödinger and Heisenberg equations are solved explicitly, as the entire set of the eigenvalues and eigenstates are known explicitly. The ground-state two-point correlation functions are derived explicitly. The multipoint correlation functions are obtained by Wick’s theorem. 15 corresponding exactly solvable XX spin systems are also displayed. They all have nearest-neighbor interactions. The exact solvability of the Schrödinger equation means that the corresponding Fokker–Planck equation is also exactly solvable. This leads to 15 exactly solvable birth and death fermions and 15 birth and death spin models. These provide plenty of material for calculating interesting quantities, e.g. entanglement entropy, etc.
On solutions to the Cauchy problem for a class of forced Burgers equations
Authors: Tiwari S , Engu S , Sahoo Manas Ranjan 
Published: November 2024

Summary
A Cauchy problem for forced Burgers equation (FBE) with time-dependent coefficients is studied in this work. We find explicit solutions of the FBE in terms of Hermite polynomials subject to various classes of initial data. Further, we prove the existence of solutions of FBE with respect to the bounded, continuous and summable initial data. We then derive an approximate solution to the Cauchy problem and find the error estimations between the true and approximate solutions. We give asymptotic profiles of the solutions depending on the initial data.