bluuebunny/crossref_metadata_2025_split huggingface dataset:
The major secreted protein of the whipworm parasite tethers to matrix and inhibits interleukin-13 function
Authors: Bancroft Allison J. , Levy Colin W. , Jowitt Thomas A. , Hayes Kelly S. , Thompson Seona , Mckenzie Edward A. , Ball Matthew D. , Dubaissi Eamon , France Aidan P. , Bellina Bruno , Sharpe Catherine , Mironov Aleksandr , Brown Sheila L. , Cook Peter C. , S. MacDonald Andrew , Thornton David J. , Grencis Richard K. 
Published: May 2019

AbstractInfection by soil transmitted parasitic helminths, such asTrichuris spp, are ubiquitous in humans and animals but the mechanisms determining persistence of chronic infections are poorly understood. Here we show that p43, the single most abundant protein inT. murisexcretions/secretions, is non-immunogenic during infection and has an unusual sequence and structure containing subdomain homology to thrombospondin type 1 and interleukin (IL)−13 receptor (R) α2. Binding of p43 to IL-13, the key effector cytokine responsible forT. murisexpulsion, inhibits IL-13 function both in vitro and in vivo. Tethering of p43 to matrix proteoglycans presents a bound source of p43 to facilitate interaction with IL-13, which may underpin chronic intestinal infection. Our results suggest that exploiting the biology of p43 may open up new approaches to modulating IL-13 function and control ofTrichurisinfections.
Switching acidity on manganese oxide catalyst with acetylacetones for selectivity-tunable amines oxidation
Authors: Jia Xiuquan , Ma Jiping , Xia Fei , Gao Mingxia , Gao Jin , Xu Jie 
Published: May 2019

AbstractThe design of metal oxide catalysts predominantly focuses on the composition or geometry engineering to enable optimized reactivity on the surface. Despite the numerous reports investigating the surface chemisorption of organic molecules on metal oxides, insights into how adsorption of organic modifiers can be exploited to optimize the catalytic properties of metal oxides are lacking. Herein, we describe the use of enolic acetylacetones to modify the surface Lewis acid properties of manganese oxide catalysts. The acetylacetone modification is stable under the reaction conditions and strongly influences the redox-acid cooperative catalysis of manganese oxides. This enables a rational control of the oxidation selectivity of structurally diverse arylmethyl amines to become switchable from nitriles to imines.
Redefining passivity breakdown of super duplex stainless steel by electrochemical operando synchrotron near surface X-ray analyses
Authors: Långberg Marie , Örnek Cem , Evertsson Jonas , Harlow Gary S. , Linpé Weronica , Rullik Lisa , Carlà Francesco , Felici Roberto , Bettini Eleonora , Kivisäkk Ulf , Lundgren Edvin , Pan Jinshan 
Published: May 2019

AbstractPassivity determines corrosion resistance and stability of highly-alloyed stainless steels, and passivity breakdown is commonly believed to occur at a fixed potential due to formation and dissolution of Cr(VI) species. In this work, the study of a 25Cr–7Ni super duplex stainless steel in 1 M NaCl solution revealed that the passivity breakdown is a continuous degradation progress of the passive film over a potential range, associated with enhanced Fe dissolution before rapid Cr dissolution and removal of the oxide. The breakdown involves structural and compositional changes of the passive film and the underlying alloy surface layer, as well as selective metal dissolution depending on the anodic potential. The onset of passivity breakdown occurred at 1000 mV/Ag/AgCl, and Fe dissolved more on the ferrite than the austenite phase. With increasing potential, the passive film became thicker but less dense, while the underlying alloy surface layer became denser indicating Ni and Mo enrichment. Rapid Cr dissolution occurred at ≥1300 mV/Ag/AgCl.
The TLR4 agonist adjuvant SLA-SE promotes functional mucosal antibodies against a parenterally delivered ETEC vaccine
Authors: Liang Hong , Poncet David , Seydoux Emilie , Rintala Nicholas D. , Maciel Milton , Ruiz Sophie , Orr Mark T. 
Published: May 2019

AbstractMany pathogens establish infection at mucosal surfaces such as the enteric pathogen Enterotoxigenic E. coli (ETEC). Thus, there is a pressing need for effective vaccination strategies that promote protective immunity at mucosal surfaces. Toll-like receptor (TLR) ligands have been extensively developed as vaccine adjuvants to promote systemic immunity, whereas attenuated bacterial toxins including cholera toxin and heat-labile toxin (LT) have initially been developed to promote mucosal immunity. Here we evaluate the ability of the TLR4 agonist second-generation lipid adjuvant formulated in a stable emulsion (SLA-SE) to augment functional mucosal antibodies elicited by intramuscular immunization with a recombinant ETEC vaccine antigen. We find that, in mice, parenterally delivered SLA-SE is at least as effective as the double-mutant LT (LTR192G/L211A, dmLT) adjuvant in promoting functional antibodies and eliciting intestinal IgA responses to the vaccine antigen. In addition, SLA-SE enhanced both the IgG2a response in the mucosa and serum, and the production of LT neutralizing serum antibodies elicited by dmLT four to eightfold. These results reveal unexpected mucosal adjuvant properties of this TLR4 agonist adjuvant when delivered intramuscularly. This may have a substantial impact on the development of vaccines against enteric and other mucosal pathogens.
Synthesis, structural and morphological characterizations of nano-Ru-based perovskites/RGO composites
Authors: Galal Ahmed , Hassan Hagar K. , Atta Nada F. , Abdel-Mageed Ali M. , Jacob Timo 
Published: May 2019

AbstractHighly-dispersed Ru-based perovskites supported on reduced graphene oxide (A-RG) nanocomposites are prepared using differentA-metal salts (Sr(NO3)2, Ba(NO3)2and Ca(NO3)2). The procedure is based on a redox reaction between the metal precursors and graphene oxide (GO) using two different routes of reaction initiation: through thermal heating or by microwave-assisted heating. The resulting nanocomposites do not require further calcination, making this method less energy-demanding. In addition, no additional chemical reagents are required for either the GO reduction or the metal precursor oxidation, leading to an overall simple and direct synthesis method. The structure and morphology of the as-preparedA-RG (non-calcined) nanocomposites are characterized using various structural analyses including XRD, XPS, SEM/EDX and HR-TEM. Changing metalAin the perovskite as well as the “activation method” resulted in significant structural and morphological changes of the formed composites. SrRuO3and BaRuO3in combination with RuO2are obtained using a conventional combustion method, while SrRuO3(~1 nm size) in combination with Ru nanoparticles are successfully prepared using microwave irradiation. For the first time, a microwave-assisted synthesis method (without calcination) was used to form crystalline nano-CaRuO3.
Unique quantitative Symbiodiniaceae signature of coral colonies revealed through spatio-temporal survey in Moorea
Authors: Rouzé Héloïse , Lecellier Gaël , Pochon Xavier , Torda Gergely , Berteaux-Lecellier Véronique 
Published: May 2019

AbstractOne of the mechanisms of rapid adaptation or acclimatization to environmental changes in corals is through the dynamics of the composition of their associated endosymbiotic Symbiodiniaceae community. The various species of these dinoflagellates are characterized by different biological properties, some of which can confer stress tolerance to the coral host. Compelling evidence indicates that the corals’ Symbiodiniaceae community can change via shuffling and/or switching but the ecological relevance and the governance of these processes remain elusive. Using a qPCR approach to follow the dynamics of Symbiodiniaceae genera in tagged colonies of three coral species over a 10–18 month period, we detected putative genus-level switching of algal symbionts, with coral species-specific rates of occurrence. However, the dynamics of the corals’ Symbiodiniaceae community composition was not driven by environmental parameters. On the contrary, putative shuffling event were observed in two coral species during anomalous seawater temperatures and nutrient concentrations. Most notably, our results reveal that a suit of permanent Symbiodiniaceae genera is maintained in each colony in a specific range of quantities, giving a unique ‘Symbiodiniaceae signature’ to the host. This individual signature, together with sporadic symbiont switching may account for the intra-specific differences in resistance and resilience observed during environmental anomalies.
Time course images of cellular injury and recovery in murine brain with high-resolution GRIN lens system
Authors: Pernici Chelsea D. , Kemp Benjamin S. , Murray Teresa A. 
Published: May 2019

AbstractTime course, in vivo imaging of brain cells is crucial to fully understand the progression of secondary cellular damage and recovery in murine models of injury. We have combined high-resolution gradient index lens technology with a model of diffuse axonal injury in rodents to enable repeated visualization of fine features of individual cells in three-dimensional space over several weeks. For example, we recorded changes in morphology in the same axons in the external capsule numerous times over 30 to 60 days, before and after induced traumatic brain injury. We observed the expansion of secondary injury and limited recovery of individual axons in this subcortical white matter tract over time. In another application, changes in microglial activation state were visualized in the penumbra region of mice before and after ischemia induced by middle carotid artery occlusion. The ability to collect a series of high-resolution images of cellular features of the same cells pre- and post-injury enables a unique opportunity to study the progression of damage, spontaneous healing, and effects of therapeutics in mouse models of neurodegenerative disease and brain injury.
Enhanced Z-isomerization of tomato lycopene through the optimal combination of food ingredients
Authors: Honda Masaki , Kageyama Hakuto , Hibino Takashi , Takemura Ryota , Goto Motonobu , Fukaya Tetsuya 
Published: May 2019

AbstractIn tomatoes, most lycopene is present in the all-E-configuration and shows very low bioavailability, whereas the Z-isomers show higher bioavailability. Hence, for health reasons, it is expected that the ingestion of lycopene Z-isomers is preferable. Very recently, it was reported that onion and possibly garlic promoted thermal Z-isomerization of (all-E)-lycopene but there are no reports for other food ingredients. Here we show new food ingredients that enhance thermal Z-isomerization of lycopene in tomatoes and from the results, we guessed some causative components having the Z-isomerization promoting effect. A comprehensive investigation of food ingredients revealed that some vegetables (Allium sp., Brassica sp., and Raphanus sp.), shiitake mushroom (Lentinus edodes), and some edible seaweeds (Saccharina sp. and Ecklonia sp.) markedly promoted Z-isomerization of (all-E)-lycopene in tomato puree with heating at 80 °C for 1 h. Moreover, it was revealed that polysulfides, isothiocyanates, carbon disulfide, and iodine, which were commonly contained in the above food ingredients in considerable quantity, enhanced thermal Z-isomerization of (all-E)-lycopene. Our findings on the food ingredients and the food-derived catalysts having a carotenoid Z-isomerization promoting effect are important, not only for the food, drink, and dietary supplement manufacturing industries, but also for daily home cooking.
Establishment and Characterization of a New Cell Line Permissive for Hepatitis C Virus Infection
Authors: Omura Hitoshi , Liu Fanwei , Shimakami Tetsuro , Murai Kazuhisa , Shirasaki Takayoshi , Kitabayashi Juria , Funaki Masaya , Nishikawa Tomoki , Nakai Ryotaro , Sumiyadorj Ariunaa , Hayashi Takehiro , Yamashita Taro , Honda Masao , Kaneko Shuichi 
Published: May 2019

AbstractHepatitis C virus (HCV) cell culture systems have facilitated the development of efficient direct-acting antivirals against HCV. Huh-7.5, a subline of the human hepatoma cell line Huh-7, has been used widely to amplify HCV because HCV can efficiently replicate in these cells due to a defect in innate antiviral signalling. Recently, we established a novel cell line, KH, derived from human hepatocellular carcinoma, which showed atypical uptake of gadolinium ethoxybenzyl diethylenetriamine pentaacetic acid (Gd-EOB-DTPA) in a Gd-EOB-DTPA-enhanced magnetic resonance imaging study. KH cells expressed hepatocyte markers including microRNA-122 (miR-122) at a lower level than Huh-7.5 cells. We demonstrated that KH cells could support the entire life cycle of HCV; however, HCV replicated at a lower rate in KH cells compared to Huh-7.5 cells, and virus particles produced from KH cells seemed to have some disadvantages in viral assembly compared with those produced from Huh-7.5 cells. KH cells had more robust interferon-stimulated gene expression and induction upon HCV RNA transfection, interferon-α2b addition, and HCV infection than Huh-7.5 cells. Interestingly, both miR-122 supplementation and IRF3 knockout in KH cells boosted HCV replication to a similar level as in Huh-7.5 cells, suggesting that intact innate antiviral signalling and lower miR-122 expression limit HCV replication in KH cells. KH cells will enable a deeper understanding of the role of the innate immune response in persistent HCV infection.
Excited States and Optical Properties of Hydrogen-Passivated Rectangular Graphenes: A Computational Study
Authors: Rai Deepak Kumar , Shukla Alok 
Published: May 2019

AbstractIn this paper, we perform large-scale electron-correlated calculations of optoelectronic properties of rectangular graphene-like polycyclic aromatic hydrocarbon molecules. Theoretical methodology employed in this work is based upon Pariser-Parr-Pople (PPP) π-electron model Hamiltonian, which includes long-range electron-electron interactions. Electron-correlation effects were incorporated using multi-reference singles-doubles configurationinteraction (MRSDCI) method, and the ground and excited state wave functions thus obtained were employed to calculate the linear optical absorption spectra of these molecules, within the electric-dipole approximation. As far as the ground state wave functions of these molecules are concerned, we find that with the increasing size, they develop a strong diradical open-shell character. Our results on optical absorption spectra are in very good agreement with the available experimental results, outlining the importance of electron-correlation effects in accurate description of the excited states. In addition to the optical gap, spin gap of each molecule was also computed using the same methodology. Calculated spin gaps exhibit a decreasing trend with the increasing sizes of the molecules, suggesting that the infinite graphene has a vanishing spin gap.
Predatory behaviour and taphonomy of a Jurassic belemnoid coleoid (Diplobelida, Cephalopoda)
Authors: Jenny Dominique , Fuchs Dirk , Arkhipkin Alexander I. , Hauff Rolf B. , Fritschi Barbara , Klug Christian 
Published: May 2019

AbstractWe describe four complete specimens of the early squid-like cephalopodClarkeiteuthis conocaudafrom the Toarcian Posidonienschiefer (Jurassic) each preserved with the bony fishLeptolepis bronniin its arms. Based on the arrangement of prey and predator, we suggest that the cephalopods caught and killed the fishes while still in well-oxygenated waters and then descended into oxygen-depleted water layers (distraction sinking) where the cephalopod suffocated. This explains the exceptional preservation, for which the Posidonienschiefer is famed. This association raises the question for the hunting behaviour of belemnoid Coleoidea. Using the proportions of soft and skeletal body parts of diplobelids and belemnitids, we estimated their body mass and buoyancy and determined the centres of mass and buoyancy. These two points were very close to each other in belemnitids, implying a low hydrodynamic stability (when ignoring the fins), while in diplobelids, the distance between those centres was greater. This suggests that diplobelids usually assumed an oblique to vertical orientation of the body axis while belemnitids could effortlessly achieve a horizontal orientation of their body. Presuming larger fins were attached to the bigger belemnitid rostra, belemnitids were better swimmers and perhaps pursuit predators while diplobelids rather ambushed their prey.
Shedding Light on Penetration of Cereal Host Stomata by Wheat Stem Rust Using Improved Methodology
Authors: Solanki Shyam , Ameen Gazala , Borowicz Pawel , Brueggeman Robert S. 
Published: May 2019

AbstractAsexual urediniospore infection of primary cereal hosts by Puccinia graminis f. sp. tritici (Pgt), the wheat stem rust pathogen, was considered biphasic. The first phase, spore germination and appressoria formation, requires a dark period and moisture. The second phase, host entry by the penetration peg originating from the appressoria formed over the guard cells, was thought to require light to induce natural stomata opening. Previous studies concluded that inhibition of colonization by the dark was due to lack of penetration through closed stomata. A sensitive WGA-Alexa Fluor 488 fungal staining, surface creation and biovolume analysis method was developed enabling visualization and quantification of fungal growth in planta at early infection stages surpassing visualization barriers using previous methods. The improved method was used to investigate infection processes of Pgt during stomata penetration and colonization in barley and wheat showing that penetration is light independent. Based on the visual growth and fungal biovolume analysis it was concluded that the differences in pathogen growth dynamics in both resistant and susceptible genotypes was due to light induced pathogen growth after penetration into the substomatal space. Thus, light induced plant or pathogen cues triggers pathogen growth in-planta post penetration.
Spatial distribution of freshwater crustaceans in Antarctic and Subantarctic lakes
Authors: Díaz Angie , Maturana Claudia S. , Boyero Luz , De Los Ríos Escalante Patricio , Tonin Alan M. , Correa-Araneda Francisco 
Published: May 2019

AbstractAntarctic and Subantarctic lakes are unique ecosystems with relatively simple food webs, which are likely to be strongly affected by climate warming. While Antarctic freshwater invertebrates are adapted to extreme environmental conditions, little is known about the factors determining their current distribution and to what extent this is explained by biogeography or climate. We explored the distribution of freshwater crustaceans (one of the most abundant and diverse group of organisms in Antarctic and Subantarctic lakes) across four biogeographic provinces (Continental Antarctic, CA; Maritime Antarctic, MA; Subantarctic islands, SA; and Southern Cool Temperate, SCT) based on the literature, predicting that species distribution would be determined by biogeography, spatial autocorrelation among regions (in relation to dispersal) and climate. We found that variation in species composition was largely explained by the joint effect of spatial autocorrelation and climate, with little effect of biogeography – only regions within the SA province had a clearly distinct species composition. This highlights a plausible main influence of crustacean dispersal – mainly through migratory seabirds – and suggests that some regions will be more affected by climate warming than others, possibly in relation to the existence of nearby sources of colonists.
Compromised Air Quality and Healthcare Safety from Smoking inside Hospitals in Shantou, China
Authors: Zeng Jun , Zhang Dangui , Liu Yindu , Zhao Duanlong , Ou Yunxuan , Fang Jiezhuang , Zheng Shimin , Yin Jianbin , Chen Sicheng , Qiu Yiling , Qiu Zhenbin , Luo Siping , Zhou Hui , Lin Ying , Ba-Thein William 
Published: May 2019

AbstractAchieving smoke-free healthcare facilities remains a great challenge in countries with a high smoking prevalence and weak regulation. Assessment of the impact of environmental tobacco smoke (ETS) and its constituent PM2.5 on the air quality in Chinese hospitals has not been reported. In this study, we conducted air quality surveys by measuring real-time PM2.5 concentrations with Dylos Air Quality Monitors in five tertiary hospitals in Shantou, China during summer (July-August 2016) and winter (November-February 2017). Twenty-eight-day surveys inside the hospitals showed median PM2.5 concentrations above the China Air Quality Standard in elevator lobbies (51.0 μg/m3, IQR 34.5–91.7), restrooms (40.2, 27.1–70.3), and corridors (36.5, 23.0–77.4). Evidence of tobacco smoking was significantly associated with PM2.5 spikes observed in all the survey locations, contributing to the air quality undesirable for health in 49.1% of total survey hours or 29.3% of summer and 75.4% of winter survey hours inside the buildings, and 33.5%, 25.7%, and 6.8% of survey hours in doctor offices, nurse stations, and patient rooms, respectively. In conclusion, smoking inside hospitals induces PM2.5 spikes that significantly compromise the air quality and impose significant health risk to the hospital inhabitants. Reinforcing comprehensive smoking ban with the vested interest of all stakeholders followed by creative disciplinary actions are suggested to ensure healthcare safety.
Using the high-temperature phase transition of iron sulfide minerals as an indicator of fault slip temperature
Authors: Chen Yan-Hong , Chen Yen-Hua , Hsu Wen-Dung , Chang Yin-Chia , Sheu Hwo-Shuenn , Lee Jey-Jau , Lin Shih-Kang 
Published: May 2019

AbstractThe transformation of pyrite into pyrrhotite above 500 °C was observed in the Chelungpu fault zone, which formed as a result of the 1999 Chi-Chi earthquake in Taiwan. Similarly, pyrite transformation to pyrrhotite at approximately 640 °C was observed during the Tohoku earthquake in Japan. In this study, we investigated the high-temperature phase-transition of iron sulfide minerals (greigite) under anaerobic conditions. We simulated mineral phase transformations during fault movement with the aim of determining the temperature of fault slip. The techniques used in this study included thermogravimetry and differential thermal analysis (TG/DTA) and in situ X-ray diffraction (XRD). We found diversification between 520 °C and 630 °C in the TG/DTA curves that signifies the transformation of pyrite into pyrrhotite. Furthermore, the in situ XRD results confirmed the sequence in which greigite underwent phase transitions to gradually transform into pyrite and pyrrhotite at approximately 320 °C. Greigite completely changed into pyrite and pyrrhotite at 450 °C. Finally, pyrite was completely transformed into pyrrhotite at 580 °C. Our results reveal the temperature and sequence in which the phase transitions of greigite occur, and indicate that this may be used to constrain the temperature of fault-slip. This conclusion is supported by field observations made following the Tohoku and Chi-Chi earthquakes.