bluuebunny/crossref_metadata_2025_split huggingface dataset:
Targeted Protection of Mitochondria of Mesophyll Cells in Transgenic CYP11A1 CDNA Expressing Tobacco Plant Leaves After NaCl-Induced Stress Damage
Authors: Baranova Ekaterina N. , Khaliluev Marat R. , Spivak Svetlana G. , Bogoutdinova Lilia R. , Klykov Valery N. , Babak Olga G. , Shpakovski Dmitry G. , Kilchevsky Alexander V. , Shematorova Elena K. , Shpakovski George V. 
Published: January 2019

Abstract
Recently we have showed that the expression of the mammalian CYP11A1 cDNA in plants confers their resistance to abiotic and biotic stresses. To determine the role of heterologous expression of cytochrome P450scc cDNA in resistance to ROS (radical oxygen species) dependent abiotic stresses, the structural changes of mitochondria and peroxisomes were studied under 150 mM NaCl-induced 14-day salinity treatment on juvenile tobacco plants in in vitro culture. Ultrastructural analysis of mesophyll cells of transgenic tobacco leaves constitutively expressing CYP11A1 cDNA was performed. Under NaCl stress, a change in shape from rounded to elon-gated, reduced section area, formation of branched mitochondria, as well as the emergence of triangular and rhomboid cristae, densification of a mitochondrial matrix, increase in density of contrasting membranes and their thickness were observed in non-transgenic plants. Transgenic plants without stress applied had mitochondria with rounded and elongated shape, twice as small as in non-transgenic plants, with a dense matrix and sinuous cristae. Surprisingly, the effect of NaCl led to increase in size of mitochondria by 1.5 times, decomposition of matrix and the emergence in organelles of light zones presumably containing mitochondrial DNA strands. Thus, the structural organisation of transgenic plant mitochondria under salinity treatment was comparable to that of non-transgenic plants under native conditions. It was also noted that the transgenic plant peroxisomes differed in non-transgenic tobacco both in normal condition and under the action of NaCl. The observed differences in ultrastructural organisation of mitochondria not only support our earlier notion about successful incorporation of the mature P450scc into this organelle, but for the first time demonstrate that the mammalian CYP11A1 signal peptide sequence could be efficiently used in the formation of targeted mitochondria protection of plants from salinity-induced damage.
Freezing–Thawing Behavior of Lime Treated Fine–grained Soil
Authors: Aldaood Abdulrahman , Khalil Amina , Bouasker Marwen , Al-Mukhtar Muzahim 
Published: January 2019

This research study was carried out to investigate the impact of freeze-thaw cycles on the mechanical and the mineralogical properties of lime treated fine-grained soil. The unconfined compressive strength, wave velocity, volume change, water content, pH and electrical conductivity values were determined during freeze-thaw cycles. Furthermore, Mercury porosimetry and X-ray diffraction tests were carry out to determine changes at microscopic level. The soil used in this study was taken at a site near Jossigny region in eastern part of Paris–France. The soil samples were treated with optimum lime percent 3% depending on the pH method, then cured for 28 days at 20 °C. The soil samples were subjected to 12 cycles of freeze-thaw following ASTM procedure. The result referred that, natural soil exhibit no strength resistance against freeze-thaw cycles and failed during the first hours of freeze-thaw cycles. Analyses indicated that freeze-thaw cycles reduce the unconfined compressive strength of all the tested samples. Moreover, water content during the applied cycles increases and induces significant volume changes. During freeze-thaw cycles, the cracks propagation which caused by the formation of ice lenses in the pores of lime treated soil samples were consider to have significant. The changes in the micro-structural and mineralogical properties reduce the durability of the lime treated soil samples when subjected to freeze-thaw cycles.
On approximation of a periodic solution of the phase field crystal equation in simulations by the finite elements method
Authors: Стародумов Илья Олегович , Галенко Петр Константинович , Кропотин Николай Валентинович , Александров Дмитрий Валерьевич 
Published: January 2019

В работе рассматривается математическая модель кристаллического фазового поля (КФП), описывающая эволюцию микроструктуры вещества во время процесса кристаллизации. Такая модель представлена нелинейным дифференциальным уравнением шестого порядка по пространству и второго по времени, для решения которого в последние годы были разработаны конечно-элементные алгоритмы, гарантирующие безусловную устойчивость и второй порядок сходимости. Однако, в силу периодического характера решения задачи КФП, точность аппроксимации решения может существенно меняться при изменении параметров дискретизации расчитываемой системы.
Принимая во внимание высокую вычислительную сложность задачи КФП в трехмерной постановке, актуальным практическим вопросом становится определение критериев дискретизации. В настоящей статье исследуется влияние размеров конечного элемента на аппроксимацию решения задачи КФП для случаев плоского и сферического фронта кристаллизации. Показано, что превышение определенных размеров конечного элемента приводит к существенным качественным и количественным изменениям численного решения и, как следствие, резкому снижению точности аппроксимации.
The use of convolutional neural networks for recognition of the type of premises using special features of the premises
Authors: Смирнов Александр Владимирович , Степанов Дмитрий Николаевич 
Published: January 2019

В статье предложен метод распознавания свёрточной нейронной сетью (СНС) типа внутренних элементов планировки здания с использованием особых черт изображений этих элементов, таких как границы или края. Предлагается алгоритм предобработки изображений для выделения границ на изображении. Создаётся база данных с изображениями различных типов внутренних элементов планировки здания, таких как коридор, дверь (дверной проём), угловые конструкции и лестницы. Также в статье представлена собственная структура СНС для распознавания типов помещений, и представлены данные о точности распознавания. Разработанный метод предлагается использовать для первичной навигации мобильных роботов.
Pemakaian Alat Kontrasepsi Suntik Berhubungan dengan Gangguan Menstruasi pada Akseptor KB di Wilayah Kerja Puskesmas Lubuk Buaya Padang Tahun 2018
Authors: Ananda Yuanita 
Published: January 2019

Kontrasepsi adalah upaya untuk mencegah terjadi kehamilan. Menurut World Health Organization (WHO) penggunaan kontrasepsi suntik sebesar 38,35%, di Indonesia sebanyak 58%. Puskesmas Lubuk Buaya merupakan angka cakupan KB baru dan KB aktif dari 21766 orang pasangan usia subur (PUS) yang menggunakan jenis kontrasepsi suntik sebanyak 7.028 (42,3%). Penggunaan kontrasepsi suntik di Puskesmas Lubuk Buaya Padang sebanyak 9.689 (30,29%) aseptor.Tujuan penelitianini adalah untuk mengetahui hubungan pemakaian alat kontrasepsi suntik dengan gangguan menstruasi pada akseptor KB di Wilayah Kerja Puskesmas Lubuk Buaya Padang Tahun 2018. Jenis penelitian analitik dengan desain Cross Sectional. Penelitian telah dilakukan di Wilayah Kerja Puskesmas Lubuk Buaya Padang Populasi penelitian ini adalah seluruh Akseptor aktif dengan suntik sebanyak 601orang, jumlah sampel sebanyak 86 orang, dengan cara Proportional Sampling. Data yang diperoleh dianalisa secara univariat dengan distribusi frekuensi dan bivariate dengan uji statistic Chi-Square. Hasil penelitian didapatkan bahwa dari 86 responden, 69,8% akseptor KB menggunakan kontrasepsi suntik , 60,5% akseptor KB mengalami gangguan menstruasi. Uji Chi-Square terdapat hubungan yang bermakna antara pemakaian alat kontrasepsi suntik dengan gangguan menstruasi, dengan nilai p value 0,003. Disarankan penelitian ini dapat dijadikan bahan informasi dalam upaya meningkatkan pelayanan.

Kata kunci :Pemakaian Kontrasepsi Suntik, GangguanMenstruasi
Combining Polarizable Embedding with the Frenkel Exciton Model: Applications to Absorption Spectra with Overlapping Solute-Solvent Bands
Authors: Stendevad Julie , Kongsted Jacob , Steinmann Casper 
Published: January 2019

Modeling of spectral properties of extended chemical systems, such as the case of a solute in a solvent, is often performed based on so-called hybrid models in which only part of the complete system is given a quantum chemical description. The remaining part of the system is represented by an embedding potential treating the environment either by a discrete or continuum model. In order to successfully make use of minimally sized quantum chemical regions, theembedding potential should represent the environment as authentic as possible. Here, the importance of exactly such an accurate description of the embedding potential is investigated by comparing the performance of the Polarizable Embedding scheme against larger sized full quantum mechanical calculations. Our main conclusion is that as long as the solute and solvent do not overlap in their absorption spectra, the Polarizable Embedding approach shows results consistent with full quantum chemical calculations. For partly overlapping absorption spectra the Polarizable Embedding approach can furthermore successfully be expanded within a Frenkel exciton approach based on only economical monomeric quantum chemical calculations. Thus, by extending the Polarizable Embedding scheme to the exciton picture it is possible to cover computations of the whole absorption spectrum andstill reduce the computational cost compared to costly cluster calculations.
Serogroup C Neisseria meningitidis disease epidemiology, seroprevalence, vaccine effectiveness and waning immunity, England, 1998/99 to 2015/16
Authors: Findlow Helen , Campbell Helen , Lucidarme Jay , Andrews Nick , Linley Ezra , Ladhani Shamez , Borrow Ray 
Published: January 2019

Background
In 1999, the United Kingdom (UK) was the first country to introduce meningococcal group C (MenC) conjugate vaccination. This vaccination programme has evolved with further understanding, new vaccines and changing disease epidemiology.

Aim
To characterise MenC disease and population protection against MenC disease in England.

Methods
Between 1998/99–2015/16, surveillance data from England for laboratory-confirmed MenC cases were collated; using the screening method, we updated vaccine effectiveness (VE) estimates. Typing data and genomes were obtained from the Meningitis Research Foundation Meningococcus Genome Library and PubMLST Neisseria database. Phylogenetic network analysis of MenC cc11 isolates was undertaken. We compared bactericidal antibody assay results using anonymised sera from 2014 to similar data from 1996–1999, 2000–2004 and 2009.

Results
MenC cases fell from 883 in 1998/99 (1.81/100,000 population) to 42 cases (0.08/100,000 population) in 2015/16. Lower VE over time since vaccination was observed after infant immunisation (p = 0.009) and a single dose at 1–4 years (p = 0.03). After vaccination at 5–18 years, high VE was sustained for ≥ 8 years; 95.0% (95% CI: 76.0– 99.5%). Only 25% (75/299) children aged 1–14 years were seroprotected against MenC disease in 2014. Recent case isolates mostly represented two cc11 strains.

Conclusion
High quality surveillance has furthered understanding of MenC vaccines and improved schedules, maximising population benefit. The UK programme provides high direct and indirect protection despite low levels of seroprotection in some age groups. High-resolution characterisation supports ongoing surveillance of distinct MenC cc11 lineages.
The contribution of child, family and health service factors to respiratory syncytial virus (RSV) hospital admissions in the first 3 years of life: birth cohort study in Scotland, 2009 to 2015
Authors: Hardelid Pia , Verfuerden Maximiliane , McMenamin Jim , Smyth Rosalind L , Gilbert Ruth 
Published: January 2019

Introduction
Several vaccines for respiratory syncytial virus (RSV) are under development. Designing an effective vaccination programme for RSV requires information about the relative contribution of risk factors for severe RSV symptoms.

Aim
To inform preventive strategies in Europe by quantifying the contribution of key child, family and health service risk factors to the burden of RSV hospital admissions in young children.

Methods
We constructed a birth cohort study of all singleton children born in Scotland between October 2009 and September 2012 using linkage between birth registration, maternity, vaccination and hospital admission records, with follow-up until the age of 3 years. RSV-confirmed hospital admissions were defined using linkage to national laboratory surveillance data. We estimated hospital admission rates per 1,000 child years and length of stay according to each risk factor. Cox proportional hazard regression models were used to estimate adjusted hazard ratios.

Results
There were 5,185 RSV admissions among the 169,726 children in the cohort: 48.6% of admissions occurred before the age of 6 months, and 29.6% after the age of 1 year. Children born prematurely, small for gestational age, between July and December, with chronic conditions, older siblings, mothers < 30 years old or delayed infant vaccination had a significantly increased risk of admission. Minimising the risk posed by older siblings could reduce RSV admissions by up to 34%.

Conclusion
Future RSV vaccination programmes must protect children throughout early childhood. Vaccination and/or interventions to reduce transmission by older siblings could substantially reduce RSV hospital admissions.
JEBOLNYA TANGGUL SITU GINTUNG (27 MARET 2009) BUKAN KARENA FAKTOR CURAH HUJAN EKSTRIM
Authors: Harsoyo Budi 
Published: January 2019

Analisis spasial dan hidrologi telah dilakukan untuk mengetahui faktor utama yangmenyebabkan insiden jebolnya Situ Gintung pada 27 Maret 2009. Analisis spasialdilakukan untuk mendapatkan beberapa parameter yang perlu sebagai masukan untukanalisis hidologi. Hasil analisis menunjukkan bahwa curah hujan sebenarnya menjadisalah satu faktor yang menyebabkan insiden, tetapi tidak sebagai faktor utama. Kondisitanggul yang sudah rusak sebagai akibat dari waktu hidup dan juga kondisi saluranpembuangan yang belum berfungsi sebagai seperti sebagai awalnya pada saatdibangun oleh Pemerintah Belanda, lebih sebagai faktor utama yang menyebabkanledakan insiden bendungan Situ Gintung Spatial and hidrology analysis has been done to find out the main factor of causingthe burst of Situ Gintung dam incident on March 27, 2009. Spatial analysis was doneto get some parameters that needs as input for hidology analysis. The analysis resultsindicating that rain fall actually was be one of cause factors that incident, but not as themain factor. The condition of dike which already broken as the consequence of its lifetime and also the condition of spill way which has not function as like as innitialy builtby Nederland Goverment, is more as principal factor of causing the burst of Situ Gintung dam incident.
PENINGKATAN PRODUKTIVITAS LAHAN MELALUI PEMANFAATAN BIOMAS TANAMAN Flemengia congesta UNTUK BUDIDAYA TANAMAN JAGUNG DI DAERAH TRANSMIGRASI KURO TIDUR, BENGKULU
Authors: Mulyono Daru 
Published: January 2019

The objective of the research is to know the effect of using biomass and combination between biomass and dolomit to the land fertility with regard to corn production. The research used Complete Randomized Design with One Way Analysis of Variance,Regression, and Correlation in order to know the effect of treatment to the land fertility.The research was carried out in Wonoharjo Village, Unit VIII Kuro Tidur Transmigration area, Bengkulu, during three planting seasons from 2003 to 2004. The results of the research showed that biomass from prunning of the hedgerows Flemengia congesta was significant to land fertility through improvement of nutrients availability, increasing pH, decreasing availability of aluminium (Al). The effect of biomass treatment into the soil to a high of 5.0 ton/ha will increase average corn production from 22.256 kw/ha (dry grain) to 37.433 kw/ha or increase 68.19 %, whereas the effect of organic matter 5.0 ton/ha combined with dolomit 2.5 ton/ha will increase average corn production from 22.256 kw/ha to 47.611 kw/ha or increase 113.92 %. The effect of biomass 10.0 ton/ha combined with dolomit 2.5 ton/ha will increase average corn production from 22.256kw/ha to 50.789 kw/ha or increase 128.20 %.
JAMUR PEMBENTUK GAHARU SEBAGAI PENJAGA KELANGSUNGAN HIDUP TANAMAN GAHARU (Aquilaria sp)
Authors: Subowo Yohanes Bernard 
Published: January 2019

Agarwood is economical important non forest timber product. The objective of this research was to obtain fungi that have ability to effectively infect and form agarwood.The fungi were isolated and selected from agarwood for effective infection studies.Ten isolates were successfully isolated, they were belonging to Aspergillus (JG5, JG17,KT17, JG31, JG32, JG21, JG19), Penicillium (JG4), Fusarium (JG12, JG18). Four isolates were successful form effective infection and they identified as Aspergillus sp JG17, Aspergillus sp JG31, Aspergillus sp JG32 and Fusarium sp JG12. They produced secondary metabolite. The Fusarium sp JG12 was the most effective strain produced agarwood and form resin gaharu on Aquilaria beccariana after 4 months inoculation. The size of agarwood formed was 2,96 cm in length and 0,16 cm wide. It is recommendedto use this strain for effective formation of agarwood.Key words: isolation, fungi, agarwood, Fusarium
KEANEKARAGAMAN JENIS BENALU PEMARASIT PADA TANAMAN DI KEBUN RAYA BATURRADEN DAN SEKITARNYA
Authors: . Sunaryo , Uji Tahan 
Published: January 2019

Benalu is one of the parasitic plant group which have been ataccked to many plantsspecies in Baturraden Botanical Garden and its vacinity. Exploration and collection of parasitic plants species in this area are conducted. Five parasitic plants species, i.e.Dendropthoe curvata, Dendropthoe pentandra, Macrosolen cochinchinensis, Scurrula lepidota and Scurrula parasitica are recorded to parasiting 18 plants species in this area. Dendropthoe pentandra is reported as the highest population species to parasiting plants species. While the plants species of Myrtaceae and Lauraceae families are also reported as the highest species parasited.Key words : diversity – mistletoe – Baturraden Botanic Garden and its vacinity
PENELITIAN PENERAPAN PEMBANGKIT LISTRIK TENAGA SURYA DAN DAMPAKNYA TERHADAP LINGKUNGAN
Authors: Djamin Martin 
Published: January 2019

Indonesia through government programmes and private sector activities. An assessment on performance of photovoltaic systems and study of their impacts was established in Kolaka, South-east Sulawesi. At the moment there are 2270 solar home systems (SHS) in this location. During the research and study, there are 9 data loggers have been installed in nine solar home systems in 4 villages of Kolaka. These data loggers were used to monitor and measure some parameters such as solar insolation , VBattery,VLoad, ILoad, IModule, and room temperature. Besides performance data collection above, a quantitative research method was done to explore the quality of life of rural and remotepeoples. 175 questionnaires were used to collect the data from households in 4 villages Polinggona, Popalia, Petudua dan Pewisoa Jaya. This paper will discuss resuts of the measurement of solar home systems, the impact on daily life of villagers and global and local environmental impact of the use of solar home systems.Kata Kunci: PLTS, data-logger, alat pengontrol baterai
PERHITUNGAN FAKTOR EMISI DI SISTEM JARINGAN KETENAGALISTRIKAN JAWA-MADURA-BALI
Authors: Febijanto Irhan 
Published: January 2019

The methodology of calculation for emission factor for grid connection is determined by IPCCC Intergovernmental Panel Climate Change). The methodology is revised periodically,and become comprehensive calculation. Mainly in developed countries, the emission factor is provided by government related institution yearly. Therefore the developers who need that value can get easily, and they can save a time and money in the developing Clean Development Mechanism Project. In Indonesia, until now there is no government institution or other related institutions that have an obligation to provide and calculate that number.PTPSE-BPPT has initiated to calculate the emission factor of grid system of Jawa-Madura-Bali using data between 2002 and 2006. The Approved Consolidated Methodology 0002 and Approved Methodology Simple I-D were used in the calculation. Based on the calculationresult, it was proved that the emission factor of JAMALI grid increased 18.2%, resulted to coal consumption increased. The value of this emission factor has been adopted by Directorate General Electricity and energy Utilization and recognized by Indonesian Designated National Authority, as a National Number of emission factor in JAMALI in 2008.Keywords : faktor emisi, emisi karbon, sistem JAMALI, pembangkit listrik,Clean Development Mechanism,
METODE PERHITUNGAN MASSA GAS CO2 YANG DISERAP FOTOBIOREAKTOR DENGAN PERSAMAAN GAS IDEAL
Authors: Santoso Arif Dwi 
Published: January 2019

BPPT conducted the mass of CO2 gas calculation in the gas absorption experiments with phytoplankton cultivation in the photobioreaktor (FBR) batch and continous syatem using the ideal gas equation. This study stated that the method of calculation with the ideal gas equation is more simple and practical in providing data analysis compared with biomass methods. Some things to note in this method include good knowledge about the movement of the gas flow diagram of inputs and outputs FBR, an appropriate gas sampling, and accuracy of measuring instruments. The required data in the mass calculation of CO2 gas in a batch photobioreactor system was resultant CO2 concentration during measurement. Meanwhile in a continuous systems, the requireddata was CO2 concentration at the reactor input and output , the rate and duration of the injection gas.Keywods : massa gas CO2, dry weight, ideal gas formula
KERAGAMAN LUMUT DAUN DI HUTAN BEKAS TERBAKAR BUKIT BANGKIRAI, KALIMANTAN TIMUR=MOSS DIVERSITY IN THE FOREST FIRE FROM BUKIT BANGKIRAI, EAST KALIMANTAN
Authors: Windadri Florentina Indah , Haerida Ida , Yamaguchi Tomio , Shimizu Hideyuki 
Published: January 2019

Bukit Bangkirai is a public recreation forest in East Kalimantan. During the long dry season in 1982-1983 and 1997-1998 some parts of the forest have burnt out, only small part war escaped. Bryophytes are small plant and usually abundantly grows on the forest.The Bryodiversity research in the Bukit Bangkirai has been done in the 2000 to 2003.Total sample of bryophyte collections about 3000 numbers since seven period collections and the result of identification were found 92 species including 27 genera and 9 families.The dominant mosses found are Achantorrhynchium papilatum, Arthrocormus schimperi,Leucobryum sanctum, Octoblepharum albidum, Pyrrhobryum spiniforme, Syrrhopodonalbovaginatus and Syrrhopodon spiculosus. Only four species found in control plot.They are Ctenidium malacobolum, Fissidens zippleianus, Groutiella tomentosa and Taxithellium lindbergii. Acroporium diminutum, Leucobryum juniperinoides, Calymperes aeruginosum, Fissidens robinsonii and Syrrhopodon semilimber were only found in the light damage plot and Fissidens wichurae, Isopterygium textori, Leucobryum bowringii,Syrrhopodon confertus were only found in the heavy damage plot. The mosses usuallygrows on the soil and rotten logs in damp site.Key words: Bangkirai forest recreation, east Kalimantan, mosses, burn areas,diversity.