bluuebunny/crossref_metadata_2025_split huggingface dataset:
D
esulfobacula
Authors: Galushko Alexander , Kuever Jan 
Published: October 2019

Abstract

De.sul.fo.ba'cu.la. L. pref.
de
from; L. neut. n.
sulfur
sulfur; L. dim. fem. n.
bacula
a small berry; N.L. fem. n.
Desulfobacula
, sulfate‐reducing small berry.

Proteobacteria / Deltaproteobacteria / Desulfobacterales / Desulfobacteraceae / Desulfobacula

Oval to sometimes coccoid or slightly curved cells, 1.2–1.5 × 1.2–3.0 µm. Occur singly or in pairs. Spore formation is not observed. Gram‐stain‐negative. Motility may occur. Strict anaerobes with a respiratory type of metabolism. Chemoorganoheterotrophs, using toluene, other aromatic compounds, and a number of low‐molecular‐weight aliphatic acids and alcohols as electron donors and also as carbon sources; these compounds are completely oxidized to CO
2
via the anaerobic C
1
pathway (carbon monoxide dehydrogenase or Wood–Ljungdahl pathway). Sulfate and other oxidized sulfur compounds serve as terminal electron acceptors and are reduced to H
2
S. Mesophilic. Optimal growth temperature is 28°C. Anoxic media (with sulfide as a reductant) containing NaCl, MgCl
2
, and vitamins are necessary for the growth of the type species. Occur in anoxic marine sediments that are rich in organic compounds.

DNA G + C content (mol%)
: 41.3–41.4 (genome).

Type species
:
Desulfobacula toluolica
Rabus, Nordhaus, Ludwig and Widdel 2000, 1415
VP
(Effective publication: Rabus, Nordhaus, Ludwig and Widdel 1993, 1450).
D
esulfocella
Authors: Galushko Alexander , Kuever Jan 
Published: October 2019

Abstract

De.sul.fo.cel'la. L. pref.
de
from; L. neut. n.
sulfur
sulfur; L. fem. n.
cella
small room, cell; N.L. fem. n.
Desulfocella
sulfate‐reducing cell.

Desulfobacterota / Desulfobacteria / Desulfobacterales / Desulforegulaceae / Desulfocella

Vibrio‐shaped cells, 0.5–0.7 µm × 2–4 µm. Motile by means of a single polar flagellum. Gram‐stain‐negative. Do not form spores. Strictly anaerobic, having a respiratory type of metabolism. Chemoorganoheterotrophs, using C
4
–C
16
straight‐chain fatty acids as carbon sources and electron donors; these are incompletely oxidized to acetate. Sulfate serves as terminal electron acceptor and is reduced to H
2
S. No fermentative growth. Mesophilic. Neutrophilic. NaCl is required for growth. Vitamins are not required, but growth is stimulated by yeast extract. Media containing a reductant are necessary for growth. The genus
Desulfocella
contains one described species.
Desulfocella
species occur in anoxic hypersaline, thalassohaline sediments of salt lakes and marine sediments.

DNA G + C content (mol%)
: 35 (LC).

Type species
:
Desulfocella halophila
Brandt, Patel and Ingvorsen 1999, 199
VP
.
D
esulfotignum
Authors: Galushko Alexander , Kuever Jan 
Published: October 2019

Abstract

De.sul.fo.tig'num. L. pref.
de
, from; L. neut. n.
sulfur
, sulfur; L. neut. n.
tignum
, stick; N.L. neut. n.
Desulfotignum
, sulfate‐reducing stick.

Desulfobacterota / Desulfobacteria / Desulfobacterales / Desulfobacteraceae / Desulfotignum

Rod‐shaped, sometimes slightly curved, cells, 0.5–1.0 µm × 1.4–4 µm. Occur singly or in pairs. Spore formation is not observed. Gram‐stain‐negative. Motility might occur. Strictly anaerobic, having both a respiratory and a fermentative type of metabolism. Chemoorganoheterotroph or chemolithoautotroph. Formate, acetate, butyrate, higher fatty acids, other organic acids, alcohols, and benzoate or similar aromatic compounds are used as carbon sources and also as electron donors for anaerobic respiration; these compounds are completely oxidized to CO
2
via the anaerobic C
1
‐pathway (carbon monoxide dehydrogenase or Wood–Ljungdahl pathway). Chemolithoautotrophic growth occurs with H
2
as the electron donor and CO
2
as the carbon source using the same pathway for acetyl‐CoA formation. Sulfate, sulfite, and thiosulfate serve as terminal electron acceptors and are reduced to H
2
S. In the absence of an external electron acceptor, slow growth occurs by fermentation of pyruvate. Media containing vitamins, a reductant, and not less than 10 g NaCl/l are necessary for growth. Mesophilic. The genus
Desulfotignum
contains three described species. Occur in anoxic parts of brackish and marine habitats.

DNA G + C content (mol%)
: 51.2–52.0 (genome, LC).

Type species
:
Desulfotignum balticum
Kuever, Könneke, Galushko and Drzyzga 2001, 176
VP
.
D
esulfotalea
Authors: Galushko Alexander , Kuever Jan 
Published: October 2019

Abstract

De.sul.fo.ta'le.a. L. pref.
de
from; L. neut. n.
sulfur
sulfur; L. fem. n.
talea
a rod; N.L. fem. n.
Desulfotalea
a sulfate‐reducing rod.

Desulfobacterota / Desulfobulbia / Desulfobulbales / Desulfocapsaceae / Desulfotalea

Cells are large rods of variable length, 0.6–0.7 µm × 1.6–7.4 µm. Cells may be motile. Cells stain Gram‐negative. Spores are not formed. Strictly anaerobic, having a respiratory and fermentative type of metabolism. Chemoorganoheterotrophs, using formate, carboxylic acids, amino acids, and alcohols as electron donors and also as carbon sources. Electron donors are incompletely oxidized, mainly to acetate. Chemolithoheterotrophs, using H
2
and acetate as electron donor and carbon source for sulfate reduction, correspondingly. Sulfate and ferric citrate serve as terminal electron acceptors and are reduced to sulfide and ferrous citrate, respectively. The type species can also use thiosulfate and sulfite as electron acceptors. Elemental sulfur, Fe(III)‐oxyhydroxide, nitrate, and nitrite are not used as electron acceptors. Fermentative growth on pyruvate and fumarate is possible. Obligately or facultatively psychrophilic. The temperature optimal for growth is 10–18°C, and growth still occurs in saltwater at −1.8°C. Neutrophilic. The optimal pH for growth is between 7.2 and 7.9. The species require sodium chloride and magnesium chloride, and optimal growth occurs at brackish or marine salt concentrations, depending on the strain. Media containing a reductant are necessary for growth. Vitamins are not required. Desulfoviridin is absent. The genus
Desulfotalea
contains two described species. Occur in permanently cold marine sediments.

DNA G + C content (mol %)
: 41.8–46.6 (LC, genome).

Type species
:
Desulfotalea psychrophila
Knoblauch, Sahm and Jørgensen 1999, 1641
VP
.
Lawsonia
Authors: Galushko Alexander , Kuever Jan 
Published: October 2019

AbstractLaw.so'ni.a. N.L. fem. n.Lawsonianamed after Gordon H.K. Lawson, the Scottish veterinarian who first recognized the organism causing porcine proliferative enteropathy.Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / LawsoniaCurved, vibrioid, or occasionally straight rods, 0.25–0.4 µm × 1.25–1.75 µm. The morphology is influenced by age and environment; descriptions refer to organisms within naturally infected intestinal epithelial cells or freshly grown cocultures of intestinal epithelial cells. Gram‐stain‐negative. Single polar cellular appendages have been observed in some preparations of cocultured strains, with rapid darting motion apparent in active cultures. Endospores not formed. Obligately intracellular, cell dependent, and microaerophilic. The intracellular bacteria are located in the apical cytoplasm of infected enterocytes and are commonly associated with free ribosomes and mitochondria. Optimal temperature usually 35–37°C. Strains have demonstrated survival, but not growth, at lower temperatures. The organisms react with the IG4 monoclonal antibody shown to be specific forLawsoniaspp. A 16S rRNA signature sequence for the genus is 5′‐GAUUAAGAGGUGCCUUUCGGGGAGCCUCAA‐3′, corresponding to the nucleotide positions 1015–1042 of theEscherichia coli16S rRNA sequence. The genus contains one described species. Strains ofLawsoniaoccur in intestines of pigs and other animals; feces.Lawsonia intracellularisis the causal agent of proliferative enteropathy.DNA G + C content (mol%): 33.2–33.3 (genome).Type species:Lawsonia intracellularisMcOrist, Gebhart, Boid and Barns 1995a, 824VP.
N
itrosarchaeum
Authors: Tolar Bradley B. , Mosier Annika C. , Lund Marie B. , Francis Christopher A. 
Published: October 2019

Abstract

Ni.tros.ar.chae'um. N.L. adj.
nitrosus
nitrous; N.L. neut. n.
archaeum
(from Gr. adj.
archaios ‐ê ‐on
ancient); N.L. neut. n.
Nitrosarchaeum
a nitrite‐producing archaeon.

Thaumarchaeota / Nitrososphaeria / Nitrosopumilales / Nitrosopumilaceae / Nitrosarchaeum

Aerobic, mesophilic, neutrophilic, nonhalophilic, and autotrophic ammonia‐oxidizing archaea. Fixes carbon (CO
2
) through the thaumarchaeal 3‐hydroxypropionate/4‐hydroxybutyrate pathway and oxidizes ammonia to nitrite for energy via the archaeal ammonia monooxygenase enzyme. Single, small rod‐shaped cells with crystalline S‐layer. Some species motile via polar or subpolar flagellum and encode genes for chemotaxis. Reproduce by binary fission. Prefers growth in low‐salinity minimal media. Gene sequence phylogeny places
Nitrosarchaeum
within the
Nitrosopumilaceae
family, as defined by both 16S rRNA and
amoA
(encoding the ammonia monooxygenase enzyme α‐subunit). Members of the genus
Nitrosarchaeum
can be found in terrestrial and aquatic environments less saline than seawater, including soils, aquifers, estuaries, rivers, and lakes.

DNA G + C content (mol%)
: 32.5–32.7 (genome analysis).

Type species
:
Nitrosarchaeum koreense
(Jung, Park, Min, Kim, Rijpstra, Sinninghe et al., 2011) Jung, Islam, Gwak, Kim and Rhee 2018, 3092
VP
(
Candidatus
Nitrosoarchaeum koreensis Jung, Park, Min, Kim, Rijpstra, et al. 2011, 8645).
R
ubritepida
Authors: Albuquerque Luciana , Egas Conceição , da Costa Milton S. 
Published: October 2019

Abstract

Ru.bri.te'pi.da. L. masc. adj.
ruber
, red; L. masc. adj.
tepidus
, warm; N.L. fem. n.
Rubritepida
, the red‐warm one.

Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Rubritepida

Only one strain of one species of the genus
Rubritepida
, isolated from a hot spring in Hungary, has been characterized. This organism forms short rod‐shaped cells that stain Gram‐negative and are 0.7–1.2 µm in width and 1.4–1.7 µm in length. The cells are motile by means of one polar flagellum. Endospores are not observed, and the colonies are red pigmented. In liquid medium, the strain forms large aggregates that precipitate rapidly. The organism is slightly thermophilic with an optimum growth temperature of around 50°C. The organism appears to be mixotrophic because thiosulfate is oxidized to sulfate, but an increase in cell mass is not observed. The strain is strictly aerobic. Bacteriochlorophyll
a
and
puf
genes, as well as carotenoids, are present. Cytochrome
c
oxidase and catalase are positive. Cofactors are necessary for growth. Sugars, polyols, organic acids, and amino acids are used as carbon and energy sources. The major respiratory quinone is ubiquinone 9 (U‐9). The polar lipids profile consists of phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidylglycerol (PG), diphosphatidylglycerol (DPG), and two unidentified aminolipids (ALs), and the major fatty acids are C
16:0
, C
18:1
ω7
c
, C
19:0
cyclo ω8
c
, and a rare fatty acid identified as C
19:0
2‐OH cyclo ω8 (Δ11:12). Isolates have been obtained from hydrothermal areas.

DNA G + C content (%)
: 70.2 (HPLC), 73.4 (Genome).

Type species
:
Rubritepida flocculans
Alarico, Rainey, Empadinhas, Schumann, Nobre and da Costa 2002b, 1915
VP
(Effective publication: Alarico, Rainey, Empadinhas, Schumann, Nobre and da Costa 2002a, 204).
H
alodesulfovibrio
Authors: Galushko Alexander , Kuever Jan 
Published: October 2019

Abstract

Ha.lo.de.sul.fo.vi'bri.o. Gr. masc. n.
hals halos
, salt; N.L. masc. n.
Desulfovibrio
, a bacterial genus; N.L. masc. n.
Halodesulfovibrio
, a salt loving
Desulfovibrio
.

Desulfobacterota / Desulfovibrionia / Desulfovibrionales / Desulfovibrionaceae / Halodesulfovibrio

Cells are vibrio shaped, 0.3–1.0 µm × 1.0–5.0 µm. Occur singly or in pairs. Spore formation is not observed. Stain Gram‐negative. Cells are motile by a single polar flagellum. Strictly anaerobic, having both a respiratory and a fermentative type of metabolism. Chemoorganoheterotrophs using simple organic compounds like lactate, pyruvate, alcohols, fumarate, and malate as electron donors and carbon sources; organic compounds are incompletely oxidized to acetate. Some species use amino acids and succinate. Most species can use H
2
(chemolithoheterotrophic growth) and formate as electron donors in the presence of acetate as an organic carbon source. Sulfate serves as terminal electron acceptor and is reduced to H
2
S. Some species can use also sulfite, thiosulfate, taurine, acrylate and fumarate as electron acceptors. Growth may occur by fermentation of pyruvate, malate, or fumarate. Mesophilic, the optimum temperature range for growth is 20–37°C. Media containing NaCl (at least 20 g/l) and a reductant are required for growth; some species need yeast extract. Occur in anoxic sediments of marine habitats and soil.

DNA G + C content (mol%)
: 45.0–46.2 (LC, genome).

Type species
:
Halodesulfovibrio aestuarii
Shivani, Subhash, Sasikala and Ramana 2017, 91
VP
.
D
esulfatirhabdium
Authors: Galushko Alexander , Kuever Jan 
Published: October 2019

Abstract

De.sul.fa'ti.rhab'di.um. L. pref.
de
from; N.L. masc. n.
sulfas ‐atis
sulfate; Gr. neut. n.
rhabdion
a little rod; N.L. neut. n.
Desulfatirhabdium
a sulfate‐reducing small rod.

Desulfobacterota / Desulfobacteria / Desulfobacterales / Desulfatirhabdiaceae / Desulfatirhabdium

Oval‐ to rod‐shaped rods, 1–1.3 µm × 2.6–3.5 µm. Occur singly or in pairs. Spore formation is not observed. Gram‐stain‐negative. Strictly anaerobic, having a respiratory and fermentative type of metabolism. Chemoorganoheterotrophs, using formate, C
3
–C
18
straight‐chain fatty acids, some aromatic compounds, alcohols, succinate, fumarate, and pyruvate as carbon sources and electron donors; these are completely oxidized to CO
2
via the anaerobic C
1
‐pathway (carbon monoxide dehydrogenase or Wood–Ljungdahl pathway). For growth on H
2
+ CO
2
, acetate is required. Sulfate and thiosulfate serve as terminal electron acceptors and are reduced to H
2
S. Sulfite, sulfur, and nitrate are not used as terminal electron acceptors. Fermentative growth on pyruvate and crotonate. Mesophilic. Optimal growth temperature, 28–30°C. Media containing a reductant are necessary for growth. The genus
Desulfatirhabdium
contains one described species. The type strain of
Desulfatirhabdium
was isolated from an UASB reactor treating paper mill wastewater.
Desulfatirhabdium
strains. might occur in anoxic freshwater and brackish sediments.

DNA G + C content (mol%)
: 56.8 (genome).

Type species
:
Desulfatirhabdium butyrativorans
Balk, Altinbas, Rijpstra, Sinninghe Damsté and Stams 2008, 113
VP
.
Associations between violence, criminality, and cognitive control deficits among young men living in low resource communities in South Africa
Authors: Bantjes Jason , Rabie Stephan , Almirol Ellen , Gordon Sarah , Stewart Jackie , Goldbeck Cameron , Weiss Robert , Tomlinson Mark , Rotheram‐Borus Mary Jane 
Published: October 2019

AbstractDespite empirical support for “Self‐control theory” in criminology, there is controversy about how self‐control should be operationalized. Working within the framework of “self‐control theory,” we investigated if violence and criminal behaviors are associated with nine distinct dimensions of cognitive control in a community sample of young men (n = 654) living in peri‐urban townships in South Africa. Cognitive control was assessed using the Behavior Rating Inventory of Executive Function. Multivariate statistical analysis was used, to identify associations between violence and criminality, and deaggregated measures of nine distinct components of cognitive control. Fifteen percent of the sample reported recent violence, 27% had been in physical fights with family/friends in the preceding 6 months, 10% reported being arrested, 4% reported forced sexual contact, and 26% reported intimate partner violence (IPV). Controlling for substance use and sociodemographic variables, contact with the criminal justice system and violence were associated with deficits in all domains of cognitive control. Forced sexual contact was associated with behavioral dysregulation. IPV was associated with behavior dysregulation and executive control dysfunction. Future studies might utilize deaggregated measures of self‐control to provide further insight into links between particular components of cognitive control and various forms of offending and violence.
Developable Rotationally Symmetric Kirigami‐Based Structures as Sensor Platforms
Authors: Evke Erin E. , Meli Dilara , Shtein Max 
Published: October 2019

AbstractDevelopable surfaces based on closed‐shape, planar, rotationally symmetric kirigami (RSK) sheets approximate 3D, globally curved surfaces upon (reversible) out‐of‐plane deflection. The distribution of stress and strain across the structure is characterized experimentally and by finite‐element analysis as a function of the material and cut parameters, enabling the integration with strain gauges to produce a wearable, conformal patch that can capture complex, multiaxis motion. Using the patch, real‐time tracking of shoulder joint and muscle behavior is demonstrated. The facile fabrication and unique properties of the RSK structures potentially enable wearable, textile‐integrated joint monitoring for athletic training, wellness, rehabilitation, feedback control for augmented mobility, motion of soft and traditional robotics, and other applications.
A Review on Additives for Halide Perovskite Solar Cells
Authors: Liu Shuang , Guan Yanjun , Sheng Yusong , Hu Yue , Rong Yaoguang , Mei Anyi , Han Hongwei 
Published: October 2019

AbstractAdditives are widely adopted for efficient, stable, and hysteresis‐free perovskite solar cells and play an important role in various breakthroughs of perovskite solar cells (PSCs). Herein the various additives adopted for PSCs are reviewed and their functioning mechanism and influence on device performance is described. The main roles of additives, modulating morphology of perovskite films, stabilizing phase of formamidinium (FA) and cesium (Cs)‐based perovskites, adjusting energy level alignment in PSCs, suppressing nonradiative recombination in perovskites, eliminating hysteresis, enhancing operational stability of PSCs, are summarized.
A Heterogeneous Carbon Nitride–Nickel Photocatalyst for Efficient Low‐Temperature CO2 Methanation
Authors: Barrio Jesús , Mateo Diego , Albero Josep , García Hermenegildo , Shalom Menny 
Published: October 2019

AbstractThe Sabatier reaction, i.e., the hydrogenation of CO2 to methane (CH4) using hydrogen (H2), constitutes a potentially scalable method to store energy in a product with a high energy density. However, up to today, this reaction has been mainly thermally driven and conducted at high temperatures (typically 400–600 °C). Using light as a renewable energy source will allow for a more sustainable process by lowering the reaction temperature. Here, it is demonstrated that Ni nanoparticles support on graphitic carbon nitride (g‐CN) are a highly efficient and stable photocatalyst for the gas‐phase CO2 methanation at low temperature (150 °C). Detailed mechanistic studies reveal a very low activation energy for the reaction and high activity under visible light, leading to a remarkable and continuous CH4 production of 28 µmol g−1 h−1 of CH4 for 24 h.
Direct numerical simulation and experimental validation of flow resistivity of nonwoven fabric filter
Authors: Rozy Mohammad Irwan F. , Ueda Masaki , Fukasawa Tomonori , Ishigami Toru , Fukui Kunihiro 
Published: October 2019

AbstractWe numerically study and then experimentally validate the flow resistivity of commercial nonwoven fabric filters used for a bag filter system. To represent a realistic flow field inside the filters during simulation, a numerical method that coordinates the filter structure obtained by X‐ray computed tomography imaging with computational fluid dynamics using the immersed boundary method is developed. The effects of superficial velocity, porosity of the filter domain, and type of filter on pressure drop are investigated and analyzed based on Darcy's law. The predictions from our numerical method are quantitatively in good agreement with the experimental measurements. We demonstrate that the Kozeny constants of the filters can be estimated by utilizing the solid volume fraction. These results demonstrate that our simulation method can be used to clarify the effects of porosity, fiber arrangement, and fiber shape on the pressure drop. Finally, its application to water droplet permeation is demonstrated.
Impact of precarious work on neighborhood health: Concept mapping by a community/academic partnership
Authors: Velonis Alisa J. , Hebert‐Beirne Jeni , Conroy Lorraine M. , Hernandez Marcella , Castaneda Dolores , Forst Linda 
Published: October 2019

AbstractObjectiveAs part of community‐based participatory research (CBPR) examining precarious employment and community health, academic, and community researchers used concept mapping to explore how residents in two high hardship neighborhoods perceive the impact of work on health.MethodsBetween January and May 2017, 292 individuals who lived or worked in two contiguous Chicago neighborhoods were engaged in brainstorming, sorting, and rating activities. Multidimensional scaling and hierarchical cluster analysis were applied, and findings were interpreted by a community‐academic partnership.ResultsBrainstorming resulted in 55 unique ways that work impacts health, each of which was rated on its perceived impact on health and prevalence in the neighborhood. Four major themes emerged: Healthy Aspects of Work, Systemic/Structural Injustices, Lack of Control/Exploitation, and Psychological/Physical Stress, which was a multidimensional, cross‐cutting theme.ConclusionThese findings provide critical insight into community perceptions of the mechanisms by which work influences health, providing a basis for community‐driven, sustainable, work‐focused interventions that promote community health.
Cyclic Alkenylsulfonyl Fluorides: Palladium‐Catalyzed Synthesis and Functionalization of Compact Multifunctional Reagents
Authors: Lou Terry Shing‐Bong , Bagley Scott W. , Willis Michael C. 
Published: October 2019

AbstractA series of low‐molecular‐weight, compact, and multifunctional cyclic alkenylsulfonyl fluorides were efficiently prepared from the corresponding alkenyl triflates. Palladium‐catalyzed sulfur dioxide insertion using the surrogate reagent DABSO effects sulfinate formation, before trapping with an F electrophile delivers the sulfonyl fluorides. A broad range of functional groups are tolerated, and a correspondingly large collection of derivatization reactions are possible on the products, including substitution at sulfur, conjugate addition, and N‐functionalization. Together, these attributes suggest that this method could find new applications in chemical biology.
Porous CuxCoyS Supraparticles for In Vivo Telomerase Imaging and Reactive Oxygen Species Generation
Authors: Li Si , Xu Liguang , Hao Changlong , Sun Maozhong , Wu Xiaoling , Kuang Hua , Xu Chuanlai 
Published: October 2019

AbstractIn this study, we successfully synthesized CuxCoyS supraparticles (SPs) on the nanoscale featuring multiple pores inside and strong absorption from 400 to 900 nm. Porous CuxCoyS SPs produced the highest reactive oxygen species (ROS) yield (1.39) when illuminated with near‐infrared (NIR) light. Furthermore, we demonstrated that CuxCoyS SPs could be used to identify cancer cells through intracellular telomerase‐responsive fluorescence (FL) imaging in living cells. Because the CuxCoyS SPs were associated with telomerase‐responsive bioimaging and high ROS production, they can be efficiently used in the diagnosis and therapy of tumors with high selectivity and excellent therapeutic effects in vivo. This study provides a new vision for the creation of multifunctional SPs, which can be used as cellular sensors and control tools for pathologies across a broad range of biological systems.