bluuebunny/crossref_metadata_2025_split huggingface dataset:
Dam Removal and Fish Passage Improvement Influence Fish Assemblages in the Penobscot River, Maine
Authors: Watson Jonathan M. , Coghlan Stephen M. , Zydlewski Joseph , Hayes Daniel B. , Kiraly Ian A. 
Published: April 2018

AbstractDams and their impoundments disrupt river habitat connectivity to the detriment of migratory fishes. Removal of dams improves riverine connectivity and lotic habitat, which benefits not only these fishes but also resident fluvial specialist species. Restoration efforts on the Penobscot River, Maine, are among the largest recently completed in the United States and include the removal of the two lowermost dams and improvements to fish passage at several remaining barriers. We assessed fish assemblages in the main‐stem river and several major tributaries before (2010–2012) and after (2014–2016) dam removal using boat electrofishing surveys and a stratified random sampling design. In total, we sampled 303 km of shoreline and captured 107,335 individual fish representing 39 species. Similarity indices and rarefaction curves indicated that significant changes in fish assemblage composition occurred in reaches that underwent both habitat and connectivity changes (i.e., directly above removed dams). The newly connected reaches became more similar in fish assemblage composition, as demonstrated by an average increase of 31% in similarity scores. The changes in similarity score in these reaches were driven by increasing access for anadromous fishes and decreasing abundances of slow‐water specialist species. For example, we observed a marked reduction in lacustrine species in former impoundments. These assemblage shifts were further illustrated by nonmetric multidimensional scaling in which sites directly above former dams exhibited the largest ordinal shifts immediately following dam removal. We also found all anadromous species in greatest abundance below the lowermost dam during each respective sampling period, though we did find some anadromous species above the lowermost dam during postremoval sampling. Our results demonstrate the potential for large dam removal projects to restore both fluvial and anadromous fish assemblages.
Landscape heterogeneity following high‐severity fire in California's forests
Authors: Hanson Chad T. 
Published: April 2018

ABSTRACTMany at‐risk wildlife species depend upon high‐severity fire patches to create “complex early seral forest” (CESF) land cover, characterized by an abundance of snags, downed logs, shrub patches, and regeneration of trees. However, concern has been expressed about whether high‐severity fire might result in persistent type conversion to nonforest, or from pine (Pinus spp.) dominance to forest predominantly consisting of white fir (Abies concolor), Douglas‐fir (Pseudotsuga menziesii), and incense‐cedar (Calocedrus decurrens), as opposed to heterogeneous natural succession and ephemeral occurrence of CESF. If type conversion is common, it could in time harm other at‐risk species that depend on dense, late‐successional forest for some of their habitat needs. I investigated postfire patterns in high‐severity fire patches within yellow pine (Pinus ponderosa and Pinus jeffreyi) and mixed‐conifer forests in California, USA, using field plots evenly spaced along random transects into the interior of patches within fires that occurred from 1999 to 2013. I found natural conifer regeneration in ≥80% of plots, even >300 m into patches. Conifer regeneration was greater closer to low–moderate‐severity areas. Areas with lower conifer regeneration, where CESF would have the greatest longevity—comprised only 4.6% of these fire areas. Pine species dominated regeneration deeper into the interior of large high‐severity patches, and fir–cedar‐dominated at patch edges. Shrubs did not impede conifer regeneration, but greater densities of conifer saplings reduced shrubs, and sapling growth increased with time‐since‐fire. My findings suggest heterogeneous land‐cover patterns are resulting from natural succession in high‐severity fire patches. © 2018 The Wildlife Society.
Percutaneous left ventricular assist device vs. intra‐aortic balloon pump in patients with severe left ventricular dysfunction undergoing cardiovascular intervention: A meta‐analysis
Authors: Hu Fang‐Bin , Cui Lian‐Qun 
Published: April 2018

AbstractObjectiveAlthough controversial, the intra‐aortic balloon pump (IABP) and percutaneous left ventricular assist device (PLVAD) are widely used for initial hemodynamic stabilization. We performed a meta‐analysis to compare the clinical outcomes of these two devices in patients with severe left ventricular (LV) dysfunction undergoing percutaneous coronary intervention (PCI) or ventricular tachycardia (VT) ablation.MethodsMEDLINE, EMBASE, the Cochrane Registry of Controlled Trials, and reference lists of relevant articles were searched. We included randomized controlled trials (RCTs) and prospective observational studies. Meta‐analysis was conducted using a random effects model.ResultsThe quantitative analysis included 4 RCTs and 2 observational studies. A total of 348 patients received PLVAD and 340 received IABP. Meta‐analysis revealed that early mortality rates (in‐hospital or 30‐day) did not differ between the PLVAD and IABP groups (relative risk (RR) = 1.03, 95% confidence interval (CI) = 0.70–1.51, P = 0.89). Significant differences were observed between the two groups in the composite, in‐hospital, non‐major adverse cardiac and cerebrovascular events (MACCE) rate (RR = 1.30, 95% CI = 1.01–1.68, P = 0.04).ConclusionsCompared with IABP, PLVAD with active circulatory support did not improve early survival in those with severe left ventricular dysfunction undergoing either PCI or VT ablation, but increased the in‐hospital non‐MACCE rate.
Fluorine and chlorine in apatites, micas, and amphiboles of layered trap intrusions of the Siberian Platform
Authors: Ryabov V.V. , Simonov O.N. , Snisar S.G. 
Published: April 2018

Abstract
Geochemistry of chlorine and fluorine in apatites, micas, and amphiboles in rocks from eight intrusive complexes of the Siberian Platform has been first studied on the basis of new factual and analytical data (more than 1000 analyses). The main attention is focused on minerals from layered intrusions. Most apatites show F &gt; Cl; the maximum contents of halogens are specific to chlorapatite (6.97 wt.% Cl) and fluorapatite (6.04 wt.% F). The total f value (f = Fe/(Fe + Mg), at.%) of femic minerals varies from 2 to 98 at.% in micas and from 22 to 95 at.% in amphiboles. The Cl–f and F–f trends show an increase in the Cl content and a decrease in the F content in the minerals with increasing f. Chlorine clearly exhibits ferrophilic properties, and fluorine has magnesiophilic properties. The halogen-richest minerals are fluorophlogopite (F = 7.06 wt.%, f = 7 at.%), chlorannite (Cl = 6.30 wt.%, f = 89 at.%), and chloroferrihastingsite (Cl = 5.22 wt.%, f = 90 at.%). Coexisting micas and amphiboles in the rocks are close in f value, but the micas are richer in Cl than the amphiboles. We assume that the halogen-containing minerals crystallized at the high pressure of halogen–hydrocarbon fluids at the levels of the MW, IW, and QIF buffers. The reducing conditions of the magmatism process are also evidenced by the presence of graphite and native metals in the rocks. The similarity of the Cl–f and F–f trends of micas and amphiboles from different intrusive complexes indicates the same mechanisms of the melt differentiation and mineral crystallization.
Intracranial Electroencephalographic Monitoring: From Subdural to Depth Electrodes
Authors: Joswig Holger , Steven David A. , Parrent Andrew G. , MacDougall Keith W. , Mirsattari Seyed M. , McLachlan Richard S. , Diosy David C. , Burneo Jorge G. 
Published: April 2018

AbstractAt the London Health Sciences Centre Epilepsy Program, stereotactically implanted depth electrodes have largely replaced subdural electrodes in the presurgical investigation of patients with drug-resistant epilepsy over the past 4 years. The rationale for this paradigm shift was more experience with, and improved surgical techniques for, stereoelectroencephalography, a possible lower-risk profile for depth electrodes, better patient tolerability, shorter operative time, as well as increased recognition of potential surgical targets that are not accessible to subdural electrodes.
Mean shear versus orientation isotropy: effects on inertialess spheroids’ rotation mode in wall turbulence
Authors: Yang Kun , Zhao Lihao , Andersson Helge I. 
Published: April 2018

The orientation of spheroidal particles dispersed in a fluid flow is known to influence the particles’ rotation mode. Rod-like and disk-like particles orient themselves differently and accordingly also rotate differently. In order to explore the role of the deterministic factors, i.e. mean shear and vorticity anisotropy, on the orientational behaviour of inertialess tracer spheroids, we adopted a purpose-made Couette–Poiseuille flow simulated numerically by Yanget al. (Intl J. Heat Fluid Flow, vol. 63, 2017, pp. 14–27). Typical wall turbulence with streamwise-oriented streaky structures caused by the locally high mean shear rate was observed only at one of the walls. The absence of mean shear at the other wall gave rise to an atypical turbulence field. Over a relatively wide and quasi-homogeneous core region, a modest mean shear rate made the vorticity field anisotropic. In spite of the mean shear, rod-like tracers were spinning and disk-like spheroids were tumbling, just as in homogeneous isotropic turbulence. We explained this phenomenon by the isotropic particle orientation and concluded that zero mean shear is not necessary for rod spinning and disk tumbling. The orientation and rotation of the Lagrangian tracer spheroids near the high shear wall were almost indistinguishable from the well-known behaviour in turbulent channel flows. Near the opposite wall, where the mean shear was negligibly small, disk-like particles aligned preferentially in the wall-normal direction and rotated similarly as in the presence of high shear. Rod-like particles, on the contrary, aligned more randomly and accordingly rotated similarly as in the core region. These observations revealed that the degree of particle orientation anisotropy has a major impact on the particle rotation mode, whereas mean shear, irrespective of the actual shear rate, only plays a secondary role in particle rotation. Deduction of the eigenvectors of the left Cauchy–Green tensor showed that the preferential orientation of the tracer spheroids was caused by the alignment of rods and disks with the strongest Lagrangian stretching and compression directions, respectively. Lagrangian stretching/compression determines the particle orientations and the particle orientation affects the particle rotation mode.
Shear/rotation competition during the roll-up of acoustically excited shear layers
Authors: Ghasemi Abbas , Tuna Burak Ahmet , Li Xianguo 
Published: April 2018

Naturally developing and acoustically excited shear layers at the Reynolds numbers $Re_{\unicode[STIX]{x1D703}_{0}}=U\unicode[STIX]{x1D703}_{0}/\unicode[STIX]{x1D708}=85{-}945$ are studied using the hot-wire (HW) anemometry and particle image velocimetry (PIV), with a focus on the shear/rotation competition during the initial Kelvin–Helmholtz (KH) roll-up. Velocity spectra and the spatial linear stability (LST) analysis characterize the fundamental ($f_{n}$) and its subharmonic ($f_{n}/2$) mode interacting due to the vortex pairing. For $276\leqslant Re_{\unicode[STIX]{x1D703}_{0}}\leqslant 780$, the root-mean-square (r.m.s.) of the streamwise turbulence intensity shows a double-peaking phenomenon, i.e. major and minor peaks of the $u_{rms}$ coexist towards the high-speed (HS) and the low-speed (LS) sides, respectively. The single/double-peaked $u_{rms}$ profiles are found to be correlated with the scattered/organized distribution of the shear/rotation, demonstrating a transitioning character with the downstream distance, $Re_{\unicode[STIX]{x1D703}_{0}}$ and the upstream turbulence levels. The rotating vortex cores and the corresponding peripheral shear regions, demonstrate the phase reversal of the velocity fluctuations with respect to the HS and the LS sides. Excitation at $f_{n}$ increases the vortex count by 21 %, advances the location of the first KH roll-up and hence also the minor peak formation location. Due to the enhanced pairing at the $f_{n}/2$ forcing, the vortex count reduces by 23 %. Before merging into the downstream rotation core, the upstream vortex is shifted towards the HS side and the major peak is accordingly augmented. Actuation advances the transition to the nonlinear state, as well as the saturation of the amplification factor. The volumetric topologies of the shear/rotation loops tracked in consecutive phases during the period of the acoustic excitation, separate from the edge and grow in time–space due to the viscous diffusion. The shearing and rotating loops are found to be associated with the thinning (elongation) and expansion (accumulation) of the vorticity, respectively.
Dietary patterns within educational groups and their association with CHD and stroke in the European Prospective Investigation into Cancer and Nutrition-Netherlands cohort
Authors: Biesbroek Sander , Kneepkens Mirjam C. , van den Berg Saskia W. , Fransen Heidi P. , Beulens Joline W. , Peeters Petra H. M. , Boer Jolanda M. A. 
Published: April 2018

AbstractHigher-educated people often have healthier diets, but it is unclear whether specific dietary patterns exist within educational groups. We therefore aimed to derive dietary patterns in the total population and by educational level and to investigate whether these patterns differed in their composition and associations with the incidence of fatal and non-fatal CHD and stroke. Patterns were derived using principal components analysis in 36 418 participants of the European Prospective Investigation into Cancer and Nutrition-Netherlands cohort. Self-reported educational level was used to create three educational groups. Dietary intake was estimated using a validated semi-quantitative FFQ. Hazard ratios were estimated using Cox Proportional Hazard analysis after a mean follow-up of 16 years. In the three educational groups, similar ‘Western’, ‘prudent’ and ‘traditional’ patterns were derived as in the total population. However, with higher educational level a lower population-derived score for the ‘Western’ and ‘traditional’ patterns and a higher score on the ‘prudent’ pattern were observed. These differences in distribution of the factor scores illustrate the association between education and food consumption. After adjustments, no differences in associations between population-derived dietary patterns and the incidence of CHD or stroke were found between the educational groups (Pinteraction between 0·21 and 0·98). In conclusion, although in general population and educational groups-derived dietary patterns did not differ, small differences between educational groups existed in the consumption of food groups in participants considered adherent to the population-derived patterns (Q4). This did not result in different associations with incident CHD or stroke between educational groups.
High-intensity-exercise-induced intestinal damage is protected by fermented milk supplemented with whey protein, probiotic and pomegranate (Punica granatumL.)
Authors: Chaves Fernanda M. , Baptista Igor L. , Simabuco Fernando M. , Quaresma Paula G. F. , Pena Fabiola L. , Bezerra Rosangela M. N. , Pauli Jose R. , da Cunha Diogo T. , Campos-Ferraz Patricia L. , Antunes Adriane E. C. 
Published: April 2018

AbstractHere we evaluated the effect of fermented milk supplemented with whey protein (approximately 80 % protein), probiotic (Bifidobacterium animalissubsp.lactisBB12) and pomegranate juice (Punica granatumL.) on the physical performance, intestinal motility and villi structure, inflammatory markers and intestinal microbiota of rats under high-intensity acute exercise. In all, twenty-four Wistar rats were separated into groups: control (Ctrl), supplemented (Supp), exercised (Exe) and exercised and supplemented (Exe+Supp). Rats in the Supp groups received fermented milk during 6 weeks by oral administration. At the end of the supplementation period, the Exe groups were submitted to high-intensity acute exercise on a treadmill. We found that intense acute exercise caused changes in the intestinal villi interspace, changes in the proportion ofLactobacillusspecies and an increase inClostridiumspecies, as well as a decrease in intestinal motility. Supplementation increased intestinal motility, and maintained the intestinal villi interspace and the natural microbiota proportions of the exercised rats. Physical performance was not improved by fermented milk supplementation. We conclude that the fermented milk containing whey protein,B. animalis(BB12) and pomegranate juice can re-establish intestinal microbiota and protect the animals from the undesirable effects of intense acute exercise.
Liftings of Jordan and Super Jordan Planes
Authors: Andruskiewitsch Nicolás , Angiono Iván , Heckenberger István 
Published: April 2018

AbstractWe classify pointed Hopf algebras with finite Gelfand–Kirillov dimension whose infinitesimal braiding has dimension 2 but is not of diagonal type, or equivalently is a block. These Hopf algebras are new and turn out to be liftings of either a Jordan or a super Jordan plane over a nilpotent-by-finite group.
Haemaphysalis cretaceaa nymph of a new species of hard tick in Burmese amber
Authors: Chitimia-Dobler Lidia , Pfeffer Timo , Dunlop Jason A 
Published: April 2018

AbstractThe first fossil potentially assignable to the extant hard tick genusHaemaphysalisCL Koch (1844) (Ixodida: Ixodidae) is described from the Late Cretaceous (ca. 99 Ma) Burmese amber of Myanmar.Haemaphysalis(Alloceraea)cretaceasp. nov. is the oldest and only fossil representative of this genus; living members of which predominantly feed on mammals. Their typical hosts are known since at least the Jurassic and the discovery of a mid-Cretaceous parasite, which might have fed on mammals raises again the question of to what extent ticks are coupled to their (modern) host groups. An inferred Triassic split of Argasidae (soft ticks) into the bird-preferring Argasinae and mammal-preferring Ornithodorinae dates to about the time when dinosaurs (later including birds) and mammaliaforms as potential hosts were emerging. Ixodidae may have split into Prostriata and Metastriata shortly after the end-Permian mass extinction, an event which fundamentally altered the terrestrial vertebrate fauna. Prostriata (the genusIxodes) prefer birds and mammals today, and some may have used groups like cynodonts in the Triassic. Basal metastriate ticks (e.g.Amblyomma) prefer reptiles, but derived metastriates (includingHaemaphysalis) again prefer mammals. Here, we may be looking at a younger (Cretaceous?) shift associated with more recent mammalian radiations.
Host–symbiont–pathogen interactions in blood-feeding parasites: nutrition, immune cross-talk and gene exchange
Authors: Husnik Filip 
Published: April 2018

AbstractAnimals are common hosts of mutualistic, commensal and pathogenic microorganisms. Blood-feeding parasites feed on a diet that is nutritionally unbalanced and thus often rely on symbionts to supplement essential nutrients. However, they are also of medical importance as they can be infected by pathogens such as bacteria, protists or viruses that take advantage of the blood-feeding nutritional strategy for own transmission. Since blood-feeding evolved multiple times independently in diverse animals, it showcases a gradient of host–microbe interactions. While some parasitic lineages are possibly asymbiotic and manage to supplement their diet from other food sources, other lineages are either loosely associated with extracellular gut symbionts or harbour intracellular obligate symbionts that are essential for the host development and reproduction. What is perhaps even more diverse are the pathogenic lineages that infect blood-feeding parasites. This microbial diversity not only puts the host into a complicated situation – distinguishing between microorganisms that can greatly decrease or increase its fitness – but also increases opportunity for horizontal gene transfer to occur in this environment. In this review, I first introduce this diversity of mutualistic and pathogenic microorganisms associated with blood-feeding animals and then focus on patterns in their interactions, particularly nutrition, immune cross-talk and gene exchange.
Ewens Sampling and Invariable Generation
Authors: BRITO GERANDY , FOWLER CHRISTOPHER , JUNGE MATTHEW , LEVY AVI 
Published: April 2018

We study the number of random permutations needed to invariably generate the symmetric group Sn when the distribution of cycle counts has the strong α-logarithmic property. The canonical example is the Ewens sampling formula, for which the special case α = 1 corresponds to uniformly random permutations.For strong α-logarithmic measures and almost every α, we show that precisely ⌈(1−αlog2)−1⌉ permutations are needed to invariably generate Sn with asymptotically positive probability. A corollary is that for many other probability measures on Sn no fixed number of permutations will invariably generate Sn with positive probability. Along the way we generalize classic theorems of Erdős, Tehran, Pyber, Łuczak and Bovey to permutations obtained from the Ewens sampling formula.
Households and heat stress: estimating the distributional consequences of climate change
Authors: Park Jisung , Bangalore Mook , Hallegatte Stephane , Sandhoefner Evan 
Published: April 2018

AbstractRecent research documents the adverse causal impacts on health and productivity of extreme heat, which will worsen with climate change. In this paper, we assess the current distribution of heat exposure within countries, to explore possible distributional consequences of climate change through temperature. Combining survey data from 690,745 households across 52 countries with spatial data on climate, this paper suggests that the welfare impacts of added heat stress may be regressivewithincountries. We find: (1) a strong negative correlation between household wealth and warmer temperature in many hot countries; (2) a strong positive correlation between household wealth and warmer temperatures in many cold countries; and (3) that poorer individuals are more likely to work in occupations with greater exposure. While our analysis is descriptive rather than causal, our results suggest a larger vulnerability of poor people to heat extremes, and potentially significant distributional and poverty implications of climate change.