bluuebunny/crossref_metadata_2025_split huggingface dataset:
Aeolian abrasion of rocks as a mechanism to produce methane in the Martian atmosphere
Authors: Safi E. , Telling J. , Parnell J. , Chojnacki M. , Patel M. R. , Realff J. , Blamey N. J. F. , Payler S. , Cockell C. S. , Davies L. , Boothroyd I. M. , Worrall F. , Wadham J. L. 
Published: June 2019

AbstractSeasonal changes in methane background levels and methane spikes have been detected in situ a metre above the Martian surface, and larger methane plumes detected via ground-based remote sensing, however their origin have not yet been adequately explained. Proposed methane sources include the UV irradiation of meteoritic-derived organic matter, hydrothermal reactions with olivine, organic breakdown via meteoroid impact, release from gas hydrates, biological production, or the release of methane from fluid inclusions in basalt during aeolian erosion. Here we quantify for the first time the potential importance of aeolian abrasion as a mechanism for releasing trapped methane from within rocks, by coupling estimates of present day surface wind abrasion with the methane contents of a variety of Martian meteorites, analogue terrestrial basalts and analogue terrestrial sedimentary rocks. We demonstrate that the abrasion of basalt under present day Martian rates of aeolian erosion is highly unlikely to produce detectable changes in methane concentrations in the atmosphere. We further show that, although there is a greater potential for methane production from the aeolian abrasion of certain sedimentary rocks, to produce the magnitude of methane concentrations analysed by the Curiosity rover they would have to contain methane in similar concentrations as economic reserved of biogenic/thermogenic deposits on Earth. Therefore we suggest that aeolian abrasion is an unlikely origin of the methane detected in the Martian atmosphere, and that other methane sources are required.
Lithium biofortification of medicinal tea Apocynum venetum
Authors: Jiang Li , Wang Lei , Tanveer Mohsin , Tian Changyan 
Published: June 2019

AbstractLithium (Li) could be much safer and successful approach to supply Li via Li-fortified food products. This study is highlighting the potential scope of Li supply via Li-biofortification of Luobuma tea (made from Apocynum venetum leaves), which is a very popular beverage in Asia with several medical properties. We explored the possibility of A. venetum as Li-enriched tea and investigated plant growth, Li accumulation, total flavonoids (TFs), rutin and hyperoside concentrations, and the antioxidant capacity of A. venetum. With the increase of additional Li, Li concentration in roots, stems and leaves increased gradually. Compared with the control treatment, 10–15 mg kg−1 Li addition stimulated the growth of A. venetum and 25 mg kg−1 Li addition significantly increased the Li concentration in leaves by 80 mg kg−1. Li application did not decrease TFs, rutin, hyperoside and antioxidant capacity of this medicinal herb. A daily consumption of 10 g Li-biofortified A. venetum leaves (cultivated with 25 mg kg−1 LiCl) can give 592 μg Li intake and would constitute 59% of the provisional recommended dietary daily intake of Li. Our results showed that Li-biofortified A. venetum leaves can be used as Li-fortified tea to enhance Li supply and to improve human health when it was used as daily drink.
Genetic variability of porcine pegivirus in pigs from Europe and China and insights into tissue tropism
Authors: Kennedy Johanna , Pfankuche Vanessa Maria , Hoeltig Doris , Postel Alexander , Keuling Oliver , Ciurkiewicz Malgorzata , Baumgärtner Wolfgang , Becher Paul , Baechlein Christine 
Published: June 2019

AbstractPegiviruses belong to the family Flaviviridae and have been found in humans and other mammalian species. To date eleven different pegivirus species (Pegivirus A-K) have been described. However, little is known about the tissue tropism and replication of pegiviruses. In 2016, a so far unknown porcine pegivirus (PPgV, Pegivirus K) was described and persistent infection in the host, similar to human pegivirus, was reported. In this study, qRT-PCR, phylogenetic analyses and fluorescence in situ hybridization (FISH) were implemented to detect and quantify PPgV genome content in serum samples from domestic pigs from Europe and Asia, in tissue and peripheral blood mononuclear cell (PBMC) samples and wild boar serum samples from Germany. PPgV was detectable in 2.7% of investigated domestic pigs from Europe and China (viral genome load 2.4 × 102 to 2.0 × 106 PPgV copies/ml), while all wild boar samples were tested negative. Phylogenetic analyses revealed pairwise nucleotide identities >90% among PPgVs. Finally, PPgV was detected in liver, thymus and PBMCs by qRT-PCR and FISH, suggesting liver- and lymphotropism. Taken together, this study provides first insights into the tissue tropism of PPgV and shows its distribution and genetic variability in Europe and China.
Indocyanine-green-assisted near-infrared dental imaging - the feasibility of in vivo imaging and the optimization of imaging conditions
Authors: Li Zhongqiang , Yao Shaomian , Xu Jian 
Published: June 2019

AbstractX-ray-based imaging, including computed tomography, plays a crucial role in the diagnosis and surgery of impacted teeth that affects over 25% of the human population. But the greatest disadvantage of this technique is ionizing radiation risk to the patients. Here we describe a completely ionizing-radiation-free in vivo near-infrared (NIR) fluoresence dental imaging with indocyanine green (ICG) agent that has rarely been applied in dental imaging. Our method can acquire dental structure images within a short period (only 10 minutes after injection) without ionizing radiation risk. NIR enables the observation of dental structures that are not distinguishable under visible conditions. At prolonged 72 hours, only molar regions remained highlighted; the contrast between molar regions and surrounding tissues was prominent; this is particularly useful for in vivo dental imaging. Using the quantitative spectral analysis, we found the peak wavelengths of ICG fluorescence shifted along with the injection time: the peak wavelength shifted 8 nm (from 819 nm to 811 nm) in 0~72 hours. The injection methods of tail vein v.s. intradermal injections caused ~3 nm shift. ICG-assisted NIR fluorescence imaging can serve as a useful tool for in vivo real-time diagnosis in dental clinics and surgeries without ionizing radiation risk.
A functional dissociation of face-, body- and scene-selective brain areas based on their response to moving and static stimuli
Authors: Pitcher David , Ianni Geena , Ungerleider Leslie G. 
Published: June 2019

AbstractThe human brain contains areas that respond selectively to faces, bodies and scenes. Neuroimaging studies have shown that a subset of these areas preferentially respond more to moving than static stimuli, but the reasons for this functional dissociation remain unclear. In the present study, we simultaneously mapped the responses to motion in face-, body- and scene-selective areas in the right hemisphere using moving and static stimuli. Participants (N = 22) were scanned using functional magnetic resonance imaging (fMRI) while viewing videos containing bodies, faces, objects, scenes or scrambled objects, and static pictures from the beginning, middle and end of each video. Results demonstrated that lateral areas, including face-selective areas in the posterior and anterior superior temporal sulcus (STS), the extrastriate body area (EBA) and the occipital place area (OPA) responded more to moving than static stimuli. By contrast, there was no difference between the response to moving and static stimuli in ventral and medial category-selective areas, including the fusiform face area (FFA), occipital face area (OFA), amygdala, fusiform body area (FBA), retrosplenial complex (RSC) and parahippocampal place area (PPA). This functional dissociation between lateral and ventral/medial brain areas that respond selectively to different visual categories suggests that face-, body- and scene-selective networks may be functionally organized along a common dimension.
Tendons from kangaroo rats are exceptionally strong and tough
Authors: Javidi Mehrdad , McGowan Craig P. , Schiele Nathan R. , Lin David C. 
Published: June 2019

AbstractTendons must be able to withstand the forces generated by muscles and not fail. Accordingly, a previous comparative analysis across species has shown that tendon strength (i.e., failure stress) increases for larger species. In addition, the elastic modulus increases proportionally to the strength, demonstrating that the two properties co-vary. However, some species may need specially adapted tendons to support high performance motor activities, such as sprinting and jumping. Our objective was to determine if the tendons of kangaroo rats (k-rat), small bipedal animals that can jump as high as ten times their hip height, are an exception to the linear relationship between elastic modulus and strength. We measured and compared the material properties of tendons from k-rat ankle extensor muscles to those of similarly sized white rats. The elastic moduli of k-rat and rat tendons were not different, but k-rat tendon failure stresses were much larger than the rat values (nearly 2 times larger), as were toughness (over 2.5 times larger) and ultimate strain (over 1.5 times longer). These results support the hypothesis that the tendons from k-rats are specially adapted for high motor performance, and k-rat tendon could be a novel model for improving tissue engineered tendon replacements.
Transferability of PCR-based diagnostic protocols: An international collaborative case study assessing protocols targeting the quarantine pine pathogen Fusarium circinatum
Authors: Ioos Renaud , Aloi Francesco , Piškur Barbara , Guinet Cécile , Mullett Martin , Berbegal Mónica , Bragança Helena , Cacciola Santa Olga , Oskay Funda , Cornejo Carolina , Adamson Kalev , Douanla-Meli Clovis , Kačergius Audrius , Martínez-Álvarez Pablo , Nowakowska Justyna Anna , Luchi Nicola , Vettraino Anna Maria , Ahumada Rodrigo , Pasquali Matias , Fourie Gerda , Kanetis Loukas , Alves Artur , Ghelardini Luisa , Dvořák Miloň , Sanz-Ros Antonio , Diez Julio J. , Baskarathevan Jeyaseelan , Aguayo Jaime 
Published: June 2019

AbstractFusarium circinatum is a harmful pathogenic fungus mostly attacking Pinus species and also Pseudotsuga menziesii, causing cankers in trees of all ages, damping-off in seedlings, and mortality in cuttings and mother plants for clonal production. This fungus is listed as a quarantine pest in several parts of the world and the trade of potentially contaminated pine material such as cuttings, seedlings or seeds is restricted in order to prevent its spread to disease-free areas. Inspection of plant material often relies on DNA testing and several conventional or real-time PCR based tests targeting F. circinatum are available in the literature. In this work, an international collaborative study joined 23 partners to assess the transferability and the performance of nine molecular protocols, using a wide panel of DNA from 71 representative strains of F. circinatum and related Fusarium species. Diagnostic sensitivity, specificity and accuracy of the nine protocols all reached values >80%, and the diagnostic specificity was the only parameter differing significantly between protocols. The rates of false positives and of false negatives were computed and only the false positive rates differed significantly, ranging from 3.0% to 17.3%. The difference between protocols for some of the performance values were mainly due to cross-reactions with DNA from non-target species, which were either not tested or documented in the original articles. Considering that participating laboratories were free to use their own reagents and equipment, this study demonstrated that the diagnostic protocols for F. circinatum were not easily transferable to end-users. More generally, our results suggest that the use of protocols using conventional or real-time PCR outside their initial development and validation conditions should require careful characterization of the performance data prior to use under modified conditions (i.e. reagents and equipment). Suggestions to improve the transfer are proposed.
Isolation and expression analysis of CsCML genes in response to abiotic stresses in the tea plant (Camellia sinensis)
Authors: Ma Qingping , Zhou Qiongqiong , Chen Canmei , Cui Qiaoyun , Zhao Yuxin , Wang Kun , Arkorful Emmanuel , Chen Xuan , Sun Kang , Li Xinghui 
Published: June 2019

AbstractCalmodulin-like (CML) proteins are a class of important Ca2+ sensors in plants, which play vital roles in regulating plant growth and development and response to abiotic stress. Tea plant (Camellia sinensis L.) is the most popular non-alcoholic economic beverage crop around the world. However, the potential functions of CMLs in either tea plants growth or in the response to environmental stresses are still unclear. In the present study, five CsCML genes (CsCML16, CsCML18-1, CsCML18-2, CsCML38, and CsCML42) were isolated from tea plant, and functionally characterized. The CsCML genes showed diverse expression patterns in leaves, roots, old stems, immature stems and flowers of tea plants. To investigate the expression changes of the genes under various abiotic stresses and ABA treatment, time-course experiments were also performed, the results indicated that the expression levels of CsCML16, 18-2 and 42 were significantly induced under low temperature and salt condition, while CsCML38 was induced distinctly under drought stress and ABA treatment. Overall, CsCML genes showed diverse function in tea plant under various stimuli. These results will increase our knowledge of the significance of CsCML genes in tea plant in response to abiotic stresses and hormone treatments.
Continuous scavenging of broadband vibrations via omnipotent tandem triboelectric nanogenerators with cascade impact structure
Authors: Bhatia Divij , Hwang Hee Jae , Huynh Nghia Dinh , Lee Sangmin , Lee Choongyeop , Nam Youngsuk , Kim Jin-Gyun , Choi Dukhyun 
Published: June 2019

AbstractAmbient vibration energy is highly irregular in force and frequency. Triboelectric nanogenerators (TENG) can convert ambient mechanical energy into useable electricity. In order to effectively convert irregular ambient vibrations into electricity, the TENG should be capable of reliably continuous operation despite variability in input forces and frequencies. In this study, we propose a tandem triboelectric nanogenerator with cascade impact structure (CIT-TENG) for continuously scavenging input vibrations with broadband frequencies. Based on resonance theory, four TENGs were explicitly designed to operate in tandem and cover a targeted frequency range of 0–40 Hz. However, due to the cascade impact structure of CIT-TENG, each TENG could produce output even under non-resonant conditions. We systematically studied the cascade impact dynamics of the CIT-TENG using finite element simulations and experiments to show how it enables continuous scavenging from 0–40 Hz even under low input accelerations of 0.2 G–0.5 G m/s2. Finally, we demonstrated that the CIT-TENG could not only scavenge broadband vibrations from a single source such as a car dashboard, but it could also scavenge very low frequency vibrations from water waves and very high frequency vibrations from air compressor machines. Thus, we showed that the CIT-TENG can be used in multiple applications without any need for redesign validating its use as an omnipotent vibration energy scavenger.
Multi-omics analysis of the development and fracture resistance for maize internode
Authors: Wang Xiaqing , Zhang Ruyang , Shi Zi , Zhang Ying , Sun Xuan , Ji Yulong , Zhao Yanxin , Wang Jidong , Zhang Yunxia , Xing Jinfeng , Wang Yuandong , Wang Ronghuan , Song Wei , Zhao Jiuran 
Published: June 2019

AbstractThe maize stalk is an important mechanical supporting tissue. The stalk fracture resistance is closely related to lodging resistance, and thus the yield. In this study, we showed that the basal zone (BZ) was more fragile than the middle zone (MZ) of the stalk internode before tasseling. In order to clarify the relationship between the different zones and fragile resistance between the internodes, we systematically analyzed the phenotypic, metabolomic and transcriptomic differences. The results indicated that the BZ zone had lower stalk strength, which corresponded to the results of less lignin, cellulose and hemicellulose than that of the MZ. The 27 highly enriched metabolites and 4430 highly expressed genes in the BZ mainly participated in pentose phosphate, and in ribosome and sterol synthesis pathways, respectively. In addition, the BZ had higher vascular bundles density but smaller size compared with the MZ. By contrast, the 28 highly enriched known metabolites and 4438 highly expressed genes in the MZ were mainly involved in lignin synthesis, and secondary metabolites synthesis, respectively, especially the phenylpropanoid synthesis. The results provide a deeper understanding of the relationship between development and fracture differences in stalk, and may facilitate the improvement of field management practice to reduce lodging.
Theoretical analysis of high-efficient dielectric nanofocusing for the generation of a brightness light source
Authors: Park Changhoon , Oh Seonghyeon , Hahn Jae W. 
Published: June 2019

AbstractHigh-brightness light sources with nanoscale volume are required in nonlinear physics studies or various nanoscale engineering areas. Although several plasmonic devices, such as plasmonic nanofocusing, have been proposed for light concentration, the efficient enhancement of the nanofocusing device to get a bright light source is still limited owing to the inevitable Ohmic loss resulting from high field confinement on metallic surface. We propose the concept of dielectric nanofocusing by reversing the concept of conventional plasmonic nanofocusing and using a three-dimensional bowtie nanoaperture (3D BNA). The optical simulations demonstrate that the 3D BNA can achieve an intensity enhancement factor of 9.01 × 104. We calculate the dispersion relation for a tapered silver–SiNx–air waveguide to prove the possibility of focusing even for a high tapered angle. The theoretically calculated modal length can explain the origin of the high intensity enhancement by proving an energy flow from the dielectric layer to the air regime in dielectric nanofocusing. The performed optical and thermal simulations demonstrate that the 3D BNA can achieve a peak intensity of 6.21 PW/cm2 by avoiding the energy confinement around the metal. Our approach provides a new method for obtaining a high brightness light source.
Dynamic evolution of mitochondrial genomes in Trebouxiophyceae, including the first completely assembled mtDNA from a lichen-symbiont microalga (Trebouxia sp. TR9)
Authors: Martínez-Alberola Fernando , Barreno Eva , Casano Leonardo M. , Gasulla Francisco , Molins Arántzazu , del Campo Eva M. 
Published: June 2019

AbstractTrebouxiophyceae (Chlorophyta) is a species-rich class of green algae with a remarkable morphological and ecological diversity. Currently, there are a few completely sequenced mitochondrial genomes (mtDNA) from diverse Trebouxiophyceae but none from lichen symbionts. Here, we report the mitochondrial genome sequence of Trebouxia sp. TR9 as the first complete mtDNA sequence available for a lichen-symbiont microalga. A comparative study of the mitochondrial genome of Trebouxia sp. TR9 with other chlorophytes showed important organizational changes, even between closely related taxa. The most remarkable change is the enlargement of the genome in certain Trebouxiophyceae, which is principally due to larger intergenic spacers and seems to be related to a high number of large tandem repeats. Another noticeable change is the presence of a relatively large number of group II introns interrupting a variety of tRNA genes in a single group of Trebouxiophyceae, which includes Trebouxiales and Prasiolales. In addition, a fairly well-resolved phylogeny of Trebouxiophyceae, along with other Chlorophyta lineages, was obtained based on a set of seven well-conserved mitochondrial genes.
Optimisation Model of Dispersal Simulations on a Dendritic Habitat Network
Authors: Heer Henriette , Streib Lucas , Kattwinkel Mira , Schäfer Ralf B. , Ruzika Stefan 
Published: June 2019

AbstractTo predict and mitigate biodiversity loss, a better understanding of species distribution and reliable dispersal models are required. A promising approach in dispersal simulation is the method of spatially explicit graph-based analysis. While graph theory is strongly connected to the field of optimisation in a variety of disciplines, the potential of optimisation has not yet been exploited in dispersal models. We introduce an optimisation model built on a graph-based dispersal simulation of an aquatic invertebrate species with a terrestrial life stage. The model simulates a directed dispersal process and investigates the fastest route to colonise predefined vacant habitat patches. The optimisation model run-time is in general an order of magnitude faster than the underlying simulation and provides the minimum time until the considered habitat patches are colonised under the given landscape structure. These results can then be used to estimate how fast newly formed habitat patches can be reached and colonised. Our model can in principle be adapted to other simulation models and can thus be seen as a pioneer of a new set of models that may support landscape conservation and restoration.
Antimicrobial capacity of Leucocyte-and Platelet Rich Fibrin against periodontal pathogens
Authors: Castro Ana B. , Herrero Esteban R. , Slomka Vera , Pinto Nelson , Teughels Wim , Quirynen Marc 
Published: June 2019

AbstractVarious studies have described the biological properties of the Leucocyte- and Platelet Rich Fibrin (L-PRF) such as the antimicrobial effect against wound bacteria, but less is known about the effect against periodontal pathogens. The aim of this study was to evaluate the antibacterial properties of the L-PRF membrane and L-PRF exudate against the main periopathogens cultured on agar plates and in planktonic solution. This study demonstrated the antibacterial effect of the L-PRF membrane against P. intermedia, F. nucleatum, and A. actinomycetemcomitans, but especially against P. gingivalis. The L-PRF exudate also showed a strong inhibition against P. gingivalis on agar plates. No inhibition could be observed for the other bacterial strains. Moreover, L-PRF exudate decreased the number of viable P.gingivalis in a planktonic solution in a dose-dependent way. However, A. actinomycetemcomitans showed an increased growth in planktonic solution when in contact with the L-PRF exudate.