bluuebunny/crossref_metadata_2025_split huggingface dataset:
Collagen type II suppresses articular chondrocyte hypertrophy and osteoarthritis progression by promoting integrin β1−SMAD1 interaction
Authors: Lian Chengjie , Wang Xudong , Qiu Xianjian , Wu Zizhao , Gao Bo , Liu Lei , Liang Guoyan , Zhou Hang , Yang Xiaoming , Peng Yan , Liang Anjing , Xu Caixia , Huang Dongsheng , Su Peiqiang 
Published: March 2019

AbstractHypertrophic differentiation is not only the terminal process of endochondral ossification in the growth plate but is also an important pathological change in osteoarthritic cartilage. Collagen type II (COL2A1) was previously considered to be only a structural component of the cartilage matrix, but recently, it has been revealed to be an extracellular signaling molecule that can significantly suppress chondrocyte hypertrophy. However, the mechanisms by which COL2A1 regulates hypertrophic differentiation remain unclear. In our study, a Col2a1 p.Gly1170Ser mutant mouse model was constructed, and Col2a1 loss was demonstrated in homozygotes. Loss of Col2a1 was found to accelerate chondrocyte hypertrophy through the bone morphogenetic protein (BMP)-SMAD1 pathway. Upon interacting with COL2A1, integrin β1 (ITGB1), the major receptor for COL2A1, competed with BMP receptors for binding to SMAD1 and then inhibited SMAD1 activation and nuclear import. COL2A1 could also activate ITGB1-induced ERK1/2 phosphorylation and, through ERK1/2-SMAD1 interaction, it further repressed SMAD1 activation, thus inhibiting BMP-SMAD1-mediated chondrocyte hypertrophy. Moreover, COL2A1 expression was downregulated, while chondrocyte hypertrophic markers and BMP-SMAD1 signaling activity were upregulated in degenerative human articular cartilage. Our study reveals novel mechanisms for the inhibition of chondrocyte hypertrophy by COL2A1 and suggests that the degradation and decrease in COL2A1 might initiate and promote osteoarthritis progression.
Identification of a novel class of RIP1/RIP3 dual inhibitors that impede cell death and inflammation in mouse abdominal aortic aneurysm models
Authors: Zhou Ting , Wang Qiwei , Phan Noel , Ren Jun , Yang Huan , Feldman Conner C. , Feltenberger John B. , Ye Zhengqing , Wildman Scott A. , Tang Weiping , Liu Bo 
Published: March 2019

AbstractReceptor interacting protein kinase-1 and -3 (RIP1 and RIP3) are essential mediators of cell death processes and participate in inflammatory responses. Our group recently demonstrated that gene deletion of Rip3 or pharmacological inhibition of RIP1 attenuated pathogenesis of abdominal aortic aneurysm (AAA), a life-threatening degenerative vascular disease characterized by depletion of smooth muscle cells (SMCs), inflammation, negative extracellular matrix remodeling, and progressive expansion of aorta. The goal of this study was to develop drug candidates for AAA and other disease conditions involving cell death and inflammation. We screened 1141 kinase inhibitors for their ability to block necroptosis using the RIP1 inhibitor Necrostatin-1s (Nec-1s) as a selection baseline. Positive compounds were further screened for cytotoxicity and virtual binding to RIP3. A cluster of top hits, represented by GSK2593074A (GSK’074), displayed structural similarity to the established RIP3 inhibitor GSK’843. In multiple cell types including mouse SMCs, fibroblasts (L929), bone marrow derived macrophages (BMDM), and human colon epithelial cells (HT29), GSK’074 inhibited necroptosis with an IC50 of ~3 nM. Furthermore, GSK’074, but not Nec-1s, blocked cytokine production by SMCs. Biochemical analyses identified both RIP1 and RIP3 as the biological targets of GSK’074. Unlike GSK’843 which causes profound apoptosis at high doses (>3 µM), GSK’074 showed no detectable cytotoxicity even at 20 µM. Daily intraperitoneal injection of GSK’074 at 0.93 mg/kg significantly attenuated aortic expansion in two mouse models of AAA (calcium phosphate: DMSO 66.06 ± 9.17% vs GSK’074 27.36 ± 8.25%, P < 0.05; Angiotensin II: DMSO 85.39 ± 15.76% vs GSK’074 36.28 ± 5.76%, P < 0.05). Histologically, GSK’074 treatment diminished cell death and macrophage infiltration in aneurysm-prone aortae. Together, our data suggest that GSK’074 represents a new class of necroptosis inhibitors with dual targeting ability to both RIP1 and RIP3. The high potency and minimum cytotoxicity make GSK’074 a desirable drug candidate of pharmacological therapies to attenuate AAA progression and other necroptosis related diseases.
Halide lead perovskites for ionizing radiation detection
Authors: Wei Haotong , Huang Jinsong 
Published: March 2019

AbstractHalide lead perovskites have attracted increasing attention in recent years for ionizing radiation detection due to their strong stopping power, defect-tolerance, large mobility-lifetime (μτ) product, tunable bandgap and simple single crystal growth from low-cost solution processes. In this review, we start with the requirement of material properties for high performance ionizing radiation detection based on direct detection mechanisms for applications in X-ray imaging and γ-ray energy spectroscopy. By comparing the performances of halide perovskites radiation detectors with current state-of-the-art ionizing radiation detectors, we show the promising features and challenges of halide perovskites as promising radiation detectors.
Hippocampal pattern separation supports reinforcement learning
Authors: Ballard Ian C. , Wagner Anthony D. , McClure Samuel M. 
Published: March 2019

AbstractAnimals rely on learned associations to make decisions. Associations can be based on relationships between object features (e.g., the three leaflets of poison ivy leaves) and outcomes (e.g., rash). More often, outcomes are linked to multidimensional states (e.g., poison ivy is green in summer but red in spring). Feature-based reinforcement learning fails when the values of individual features depend on the other features present. One solution is to assign value to multi-featural conjunctive representations. Here, we test if the hippocampus forms separable conjunctive representations that enables the learning of response contingencies for stimuli of the form: AB+, B−, AC−, C+. Pattern analyses on functional MRI data show the hippocampus forms conjunctive representations that are dissociable from feature components and that these representations, along with those of cortex, influence striatal prediction errors. Our results establish a novel role for hippocampal pattern separation and conjunctive representation in reinforcement learning.
Machine-learning reprogrammable metasurface imager
Authors: Li Lianlin , Ruan Hengxin , Liu Che , Li Ying , Shuang Ya , Alù Andrea , Qiu Cheng-Wei , Cui Tie Jun 
Published: March 2019

AbstractConventional microwave imagers usually require either time-consuming data acquisition, or complicated reconstruction algorithms for data post-processing, making them largely ineffective for complex in-situ sensing and monitoring. Here, we experimentally report a real-time digital-metasurface imager that can be trained in-situ to generate the radiation patterns required by machine-learning optimized measurement modes. This imager is electronically reprogrammed in real time to access the optimized solution for an entire data set, realizing storage and transfer of full-resolution raw data in dynamically varying scenes. High-accuracy image coding and recognition are demonstrated in situ for various image sets, including hand-written digits and through-wall body gestures, using a single physical hardware imager, reprogrammed in real time. Our electronically controlled metasurface imager opens new venues for intelligent surveillance, fast data acquisition and processing, imaging at various frequencies, and beyond.
Xist/Tsix expression dynamics during mouse peri-implantation development revealed by whole-mount 3D RNA-FISH
Authors: Shiura Hirosuke , Abe Kuniya 
Published: March 2019

AbstractDuring peri-implantation development in mice, X chromosome inactivation (XCI) status changes dynamically. Here, we examined the expression of Xist and its antisense partner, Tsix, via whole-mount 3D RNA-FISH using strand-specific probes and evaluated XCI status. The results indicate that Xist expression disappears completely by embryonic day (E) 4.5 without Tsix activation in the ICM and that Xist re-expression occurs at E4.75 in some cells, suggesting that random XCI is already initiated in these cells. Intriguingly, epiblast cells exhibiting biallelic Xist expression were observed frequently (~15%) at E5.25 and E5.5. Immunostaining analysis of epigenetic modifications suggests that global change in epigenomic status occurs concomitantly with the transition from imprinted to random XCI. However, global upregulation of H3K27me3 modifications initiated earlier than other modifications, occurring specifically in ICM during progression of Xist erasure. Although both Xist expression and imprinted XCI are thought to be stable in the primitive endoderm/visceral endoderm and trophectoderm/extraembryonic ectoderm lineages, transient loss of Xist clouds was noted only in a subset of extraembryonic ectodermal cells, suggesting distinct features of Xist regulation among the three different embryonic tissue layers. These results will serve as a basis for future functional studies of XCI regulation in vivo.
Impact of Buffer Layer Process and Na on Shunt Paths of Monolithic Series-connected CIGSSe Thin Film Solar Cells
Authors: Bin Mo Chan , Park Se Jin , Bae Soohyun , Lim Mi-hwa , Nam Junggyu , Kim Dongseop , Yang JungYup , Suh Dongchul , Min Byoung Koun , Kim Donghwan , Kang Yoonmook , Kim Young-Su , Lee Hae-seok 
Published: March 2019

AbstractThe illuminated current-voltage characteristics of Cu(In,Ga)(S,Se)2 (CIGSSe) thin film solar cells fabricated using two different buffer layer processes: chemical bath deposition (CBD) and atomic layer deposition (ALD) were investigated. The CIGSSe solar cell with the ALD buffer showed comparable conversion efficiency to the CIGSSe solar cell with CBD buffer but lower shunt resistance even though it showed lower point shunt defect density as measured in electroluminescence. The shunt paths were investigated in detail by capturing the high-resolution dark lock-in thermography images, resolving the shunt resistance contributions of the scribing patterns (P1, P3), and depth profiling of the constituent elements. It was found that the concentration of Na from the soda-lime glass substrate played a key role in controlling the shunt paths. In the ALD process, Na segregated at the surface of CIGSSe and contributed to the increase in the shunt current through P1 and P3, resulting in a reduction in the fill factor of the CIGSSe solar cells.
Impact of microscopic In fluctuations on the optical properties of InxGa1-xN blue light-emitting diodes assessed by low-energy X-ray fluorescence mapping using synchrotron radiation
Authors: Sakaki Atsushi , Funato Mitsuru , Miyano Munehiko , Okazaki Toshiyuki , Kawakami Yoichi 
Published: March 2019

AbstractAmong the III-nitride semiconductors, InxGa1-xN is a key material for visible optical devices such as light-emitting diodes (LEDs), laser diodes, and solar cells. Light emission is achieved via electron-hole recombination within the InxGa1-xN layer. When InxGa1-xN-based blue LEDs were first commercialized, the high probability of electron-hole radiative recombination despite the presence of numerous threading dislocations was a mystery. Extensive studies have proposed that carrier localization in nanoscopic potential fluctuations due, for example, to the immiscibility between InN and GaN or random alloy fluctuations is a key mechanism for the high emission efficiency. In actual LED devices, not only nanoscopic potential fluctuations but also microscopic ones exist within the InxGa1-xN quantum well light-emitting layers. Herein we map the synchrotron radiation microbeam X-ray fluorescence of InxGa1-xN blue LEDs at a sub-micron level. To acquire weak signals of In, Ar, which is in the air and has a fluorescent X-ray energy similar to that of In, is evacuated from the sample chamber by He purge. As a result, we successfully visualize the spatial In distribution of InxGa1-xN layer nondestructively and present good agreement with optical properties. Additionally, we demonstrate that unlike nanoscopic fluctuations, microscopic In compositional fluctuations do not necessarily have positive effects on device performance. Appropriately controlling both nanoscopic and microscopic fluctuations at the same time is necessary to achieve supreme device performance.
Voltage readout from a piezoelectric intracochlear acoustic transducer implanted in a living guinea pig
Authors: Zhao Chuming , Knisely Katherine E. , Colesa Deborah J. , Pfingst Bryan E. , Raphael Yehoash , Grosh Karl 
Published: March 2019

AbstractThe ability to measure the voltage readout from a sensor implanted inside the living cochlea enables continuous monitoring of intracochlear acoustic pressure locally, which could improve cochlear implants. We developed a piezoelectric intracochlear acoustic transducer (PIAT) designed to sense the acoustic pressure while fully implanted inside a living guinea pig cochlea. The PIAT, fabricated using micro-electro-mechanical systems (MEMS) techniques, consisted of an array of four piezoelectric cantilevers with varying lengths to enhance sensitivity across a wide frequency bandwidth. Prior to implantation, benchtop tests were conducted to characterize the device performance in air and in water. When implanted in the cochlea of an anesthetized guinea pig, the in vivo voltage response from the PIAT was measured in response to 80–95 dB sound pressure level 1–14 kHz sinusoidal acoustic excitation at the entrance of the guinea pig’s ear canal. All sensed signals were above the noise floor and unaffected by crosstalk from the cochlear microphonic or external electrical interference. These results demonstrate that external acoustic stimulus can be sensed via the piezoelectric voltage response of the implanted MEMS transducer inside the living cochlea, providing key steps towards developing intracochlear acoustic sensors to replace external or subcutaneous microphones for auditory prosthetics.
Changes in adult sex ratio in wild bee communities are linked to urbanization
Authors: Fitch Gordon , Glaum Paul , Simao Maria-Carolina , Vaidya Chatura , Matthijs Jill , Iuliano Benjamin , Perfecto Ivette 
Published: March 2019

AbstractWild bees are indispensable pollinators, supporting global agricultural yield and angiosperm biodiversity. They are experiencing widespread declines, resulting from multiple interacting factors. The effects of urbanization, a major driver of ecological change, on bee populations are not well understood. Studies examining the aggregate response of wild bee abundance and diversity to urbanization tend to document minor changes. However, the use of aggregate metrics may mask trends in particular functional groups. We surveyed bee communities along an urban-to-rural gradient in SE Michigan, USA, and document a large change in observed sex ratio (OSR) along this gradient. OSR became more male biased as urbanization increased, mainly driven by a decline in medium and large bodied ground-nesting female bees. Nest site preference and body size mediated the effects of urbanization on OSR. Our results suggest that previously documented negative effects of urbanization on ground-nesting bees may underestimate the full impact of urbanization, and highlight the need for improved understanding of sex-based differences in the provision of pollination services by wild bees.
Behavioral Compensations and Neuronal Remodeling in a Rodent Model of Chronic Intervertebral Disc Degeneration
Authors: Leimer Elizabeth M. , Gayoso Matthew G. , Jing Liufang , Tang Simon Y. , Gupta Munish C. , Setton Lori A. 
Published: March 2019

AbstractLow back pain is associated with degeneration of the intervertebral disc, but specific mechanisms of pain generation in this pathology remain unknown. Sensory afferent nerve fiber growth into the intervertebral disc after injury-induced inflammation may contribute to discogenic pain. We describe a clinically relevant behavioral phenotype in a rodent model of chronic intervertebral disc degeneration which provides a means to map sensory neuron changes to a single affected lumbar intervertebral disc. Unilateral disc puncture of one lumbar intervertebral disc revealed a bilateral behavioral phenotype characterized by gait changes and decreased activity. Moreover, neurons extracted from the dorsal root ganglia in animals with intervertebral disc injury demonstrated altered TRPV1 activation in vitro independent of exogenous NGF administration. Finally, neuronal nuclear hypertrophy and elevated expression of p75NTR provide evidence of active adaptation of innervating sensory neurons in chronic intervertebral disc degeneration. Therefore, this model and findings provide the template for future studies to establish specific mechanisms of nociceptive pain in chronic intervertebral disc degeneration.
Comparison of convective heat transfer for Kagome and tetrahedral truss-cored lattice sandwich panels
Authors: Yang Guangmeng , Hou Chi , Zhao Meiying , Mao Wei 
Published: March 2019

AbstractThe aim of this paper is to make a thorough comparison between Kagome and tetrahedral truss-cored lattices both experimentally and numerically. Two titanium sandwich panels –one cored with the Kagome lattice and the other with the tetrahedral lattice –are manufactured by 3D printing technology. Comparisons of the thermal insulation, the inner flow pattern and the heat transfer between the two sandwich panels are completed subsequently according to the results from forced convective experiments and numerical simulation. Within the Reynolds number range of interest for this study, the Kagome lattice exhibits excellent heat dissipation compared with the tetrahedral lattice. In particular, when the cooling air flows in the direction OB of the two sandwich panels, the Kagome lattice provides an 8~37% higher overall Nusselt number for the sandwich panel compared to the tetrahedral lattice. The superiority of the Kagome lattice comes from a unique configuration in which the centre vertex acting as the vortex generator not only disturbs the primary flow but also induces more serious flow stagnation and separation. The complex fluid flow behaviours enhance heat transfer on both the endwalls and the trusses while causing a pressure drop that is almost two times higher than that of the tetrahedral lattice in the flow direction OB.
Increasing predation risk with light reduces speed, exploration and visit duration of invasive ship rats (Rattus rattus)
Authors: Farnworth Bridgette , Meitern Richard , Innes John , Waas Joseph R. 
Published: March 2019

AbstractExploiting predation cues to deter pests remains an untapped management tool for conservationists. We examined foraging and movement patterns of 20 wild ship rats (Rattus rattus) within a large, outdoor ‘U maze’ that was either illuminated or dark to assess if light (an indirect predation cue) could deter rodents from ecologically vulnerable locations. Light did not alter rats’ foraging behaviour (latency to approach seed tray, visits to seed tray, time per visit to seed tray, total foraging duration, foraging rate) within the experimental resource patch but three of seven movement behaviours were significantly impaired (53% fewer visits to the maze, 70% less exploration within the maze, 40% slower movement within the maze). The total time males spent exposed to illumination also declined by 45 minutes per night, unlike females. Individual visits tended to be longer under illumination, but the latency to visit and the latency to cross through the U maze were unaffected by illumination. Elevating predation risk with illumination may be a useful pest management technique for reducing ship rat activity, particularly in island ecosystems where controlling mammalian predators is paramount to preserving biodiversity.
Wrist morphology reveals substantial locomotor diversity among early catarrhines: an analysis of capitates from the early Miocene of Tinderet (Kenya)
Authors: Wuthrich Craig , MacLatchy Laura M. , Nengo Isaiah O. 
Published: March 2019

AbstractConsiderable taxonomic diversity has been recognised among early Miocene catarrhines (apes, Old World monkeys, and their extinct relatives). However, locomotor diversity within this group has eluded characterization, bolstering a narrative that nearly all early catarrhines shared a primitive locomotor repertoire resembling that of the well-described arboreal quadruped Ekembo heseloni. Here we describe and analyse seven catarrhine capitates from the Tinderet Miocene sequence of Kenya, dated to ~20 Ma. 3D morphometrics derived from these specimens and a sample of extant and fossil capitates are subjected to a series of multivariate comparisons, with results suggesting a variety of locomotor repertoires were present in this early Miocene setting. One of the fossil specimens is uniquely derived among early and middle Miocene capitates, representing the earliest known instance of great ape-like wrist morphology and supporting the presence of a behaviourally advanced ape at Songhor. We suggest Rangwapithecus as this catarrhine’s identity, and posit expression of derived, ape-like features as a criterion for distinguishing this taxon from Proconsul africanus. We also introduce a procedure for quantitative estimation of locomotor diversity and find the Tinderet sample to equal or exceed large extant catarrhine groups in this metric, demonstrating greater functional diversity among early catarrhines than previously recognised.
L1cam-mediated developmental processes of the nervous system are differentially regulated by proteolytic processing
Authors: Linneberg Cecilie , Toft Christian Liebst Frisk , Kjaer-Sorensen Kasper , Laursen Lisbeth S. 
Published: March 2019

AbstractNormal brain development depends on tight temporal and spatial regulation of connections between cells. Mutations in L1cam, a member of the immunoglobulin (Ig) superfamily that mediate cell-cell contacts through homo- and heterophilic interactions, are associated with several developmental abnormalities of the nervous system, including mental retardation, limb spasticity, hydrocephalus, and corpus callosum aplasia. L1cam has been reported to be shed from the cell surface, but the significance of this during different phases of brain development is unknown. We here show that ADAM10-mediated shedding of L1cam is regulated by its fibronectin type III (FNIII) domains. Specifically, the third FNIII domain is important for maintaining a conformation where access to a membrane proximal cleavage site is restricted. To define the role of ADAM10/17/BACE1-mediated shedding of L1cam during brain development, we used a zebrafish model system. Knockdown of the zebrafish, l1camb, caused hydrocephalus, defects in axonal outgrowth, and myelination abnormalities. Rescue experiments with proteinase-resistant and soluble L1cam variants showed that proteolytic cleavage is not required for normal axonal outgrowth and development of the ventricular system. In contrast, metalloproteinase-mediated shedding is required for efficient myelination, and only specific fragments are able to mediate this stimulatory function of the shedded L1cam.