bluuebunny/crossref_metadata_2025_split huggingface dataset:
Amending the Structure of Renewable Carbon from Biorefinery Waste-Streams for Energy Storage Applications
Authors: Ho Hoi Chun , Goswami Monojoy , Chen Jihua , Keum Jong K. , Naskar Amit K. 
Published: May 2018

AbstractBiorefineries produce impure sugar waste streams that are being underutilized. By converting this waste to a profitable by-product, biorefineries could be safeguarded against low oil prices. We demonstrate controlled production of useful carbon materials from the waste concentrate via hydrothermal synthesis and carbonization. We devise a pathway to producing tunable, porous spherical carbon materials by modeling the gross structure formation and developing an understanding of the pore formation mechanism utilizing simple reaction principles. Compared to a simple hydrothermal synthesis from sugar concentrate, emulsion-based synthesis results in hollow spheres with abundant microporosity. In contrast, conventional hydrothermal synthesis produces solid beads with micro and mesoporosity. All the carbonaceous materials show promise in energy storage application. Using our reaction pathway, perfect hollow activated carbon spheres can be produced from waste sugar in liquid effluence of biomass steam pretreatment units. The renewable carbon product demonstrated a desirable surface area of 872 m2/g and capacitance of up to 109 F/g when made into an electric double layer supercapacitor. The capacitor exhibited nearly ideal capacitive behavior with 90.5% capacitance retention after 5000 cycles.
Less invasive surfactant administration and complications of preterm birth
Authors: Härtel Christoph , Paul Pia , Hanke Kathrin , Humberg Alexander , Kribs Angela , Mehler Katrin , Vochem Matthias , Wieg Christian , Roll Claudia , Herting Egbert , Göpel Wolfgang 
Published: May 2018

AbstractIn a large cohort study of the German Neonatal Network (GNN) we aimed to evaluate whether less invasive surfactant administration (LISA) strategy is associated with complications of preterm birth. Within the observational period n = 7533 very-low-birth-weight infants (VLBWI) with gestational age 22 0/7 to 28 6/7 weeks were enrolled in GNN; n = 1214 VLBWI never received surfactant, n = 2624 VLBWI were treated according to LISA procedure, n = 3695 VLBWI had surfactant via endotracheal tube (ETT). LISA was associated with a reduced risk for adverse outcome measures including mortality [odds ratio (OR) 0.66 (95% CI: 0.51–0.84), p < 0.001] bronchopulmonary dysplasia [BPD; OR 0.55 (95% CI: 0.49–0.62), p < 0.001], intracerebral hemorrhage (ICH) grade II-IV [OR 0.55 (95% CI: 0.48–0.64), p < 0.001] and retinopathy of prematurity [ROP; OR 0.62 (95% CI: 0.45–0.85), p < 0.001]. Notably, LISA was associated with an increased risk for focal intestinal perforation [FIP; OR 1.49 (95% CI: 1.14–1.95), p = 0.002]. The differences in FIP rates were primarily observed in VLBWI born <26 weeks (LISA: 10.0 vs. ETT: 7.4%, p = 0.029). Our observational data confirm that LISA is associated with improved outcome. In infants <26 weeks we noted an increased risk for FIP. Future randomized controlled trials including LISA need to integrate safety analyses for this particular subgroup.
Interferon-gamma drives programmed death-ligand 1 expression on islet β cells to limit T cell function during autoimmune diabetes
Authors: Osum Kevin C. , Burrack Adam L. , Martinov Tijana , Sahli Nathanael L. , Mitchell Jason S. , Tucker Christopher G. , Pauken Kristen E. , Papas Klearchos , Appakalai Balamurugan , Spanier Justin A. , Fife Brian T. 
Published: May 2018

AbstractType 1 diabetes is caused by autoreactive T cell-mediated β cell destruction. Even though co-inhibitory receptor programmed death-1 (PD-1) restrains autoimmunity, the expression and regulation of its cognate ligands on β cell remains unknown. Here, we interrogated β cell-intrinsic programmed death ligand-1 (PD-L1) expression in mouse and human islets. We measured a significant increase in the level of PD-L1 surface expression and the frequency of PD-L1+ β cells as non-obese diabetic (NOD) mice aged and developed diabetes. Increased β cell PD-L1 expression was dependent on T cell infiltration, as β cells from Rag1-deficient mice lacked PD-L1. Using Rag1-deficient NOD mouse islets, we determined that IFN-γ promotes β cell PD-L1 expression. We performed analogous experiments using human samples, and found a significant increase in β cell PD-L1 expression in type 1 diabetic samples compared to type 2 diabetic, autoantibody positive, and non-diabetic samples. Among type 1 diabetic samples, β cell PD-L1 expression correlated with insulitis. In vitro experiments with human islets from non-diabetic individuals showed that IFN-γ promoted β cell PD-L1 expression. These results suggest that insulin-producing β cells respond to pancreatic inflammation and IFN-γ production by upregulating PD-L1 expression to limit self-reactive T cells.
In vivo wide-field calcium imaging of mouse thalamocortical synapses with an 8 K ultra-high-definition camera
Authors: Yoshida Eriko , Terada Shin-Ichiro , Tanaka Yasuyo H. , Kobayashi Kenta , Ohkura Masamichi , Nakai Junichi , Matsuzaki Masanori 
Published: May 2018

AbstractIn vivo wide-field imaging of neural activity with a high spatio-temporal resolution is a challenge in modern neuroscience. Although two-photon imaging is very powerful, high-speed imaging of the activity of individual synapses is mostly limited to a field of approximately 200 µm on a side. Wide-field one-photon epifluorescence imaging can reveal neuronal activity over a field of ≥1 mm2 at a high speed, but is not able to resolve a single synapse. Here, to achieve a high spatio-temporal resolution, we combine an 8 K ultra-high-definition camera with spinning-disk one-photon confocal microscopy. This combination allowed us to image a 1 mm2 field with a pixel resolution of 0.21 µm at 60 fps. When we imaged motor cortical layer 1 in a behaving head-restrained mouse, calcium transients were detected in presynaptic boutons of thalamocortical axons sparsely labeled with GCaMP6s, although their density was lower than when two-photon imaging was used. The effects of out-of-focus fluorescence changes on calcium transients in individual boutons appeared minimal. Axonal boutons with highly correlated activity were detected over the 1 mm2 field, and were probably distributed on multiple axonal arbors originating from the same thalamic neuron. This new microscopy with an 8 K ultra-high-definition camera should serve to clarify the activity and plasticity of widely distributed cortical synapses.
Direct observation of pure pentavalent uranium in U2O5 thin films by high resolution photoemission spectroscopy
Authors: Gouder T. , Eloirdi R. , Caciuffo R. 
Published: May 2018

AbstractThin films of the elusive intermediate uranium oxide U2O5 have been prepared by exposing UO3 precursor multilayers to atomic hydrogen. Electron photoemission spectra measured about the uranium 4f core-level doublet contain sharp satellites separated by 7.9(1) eV from the 4f main lines, whilst satellites characteristics of the U(IV) and U(VI) oxidation states, expected respectively at 6.9(1) and 9.7(1) eV from the main 4f lines, are absent. This shows that uranium ions in the films are in a pure pentavalent oxidation state, in contrast to previous investigations of binary oxides claiming that U(V) occurs only as a metastable intermediate state coexisting with U(IV) and U(VI) species. The ratio between the 5f valence band and 4f core-level uranium photoemission intensities decreases by about 50% from UO2 to U2O5, which is consistent with the 5f 2 (UO2) and 5f 1 (U2O5) electronic configurations of the initial state. Our studies conclusively establish the stability of uranium pentoxide.
Oligomeric states of microbial rhodopsins determined by high-speed atomic force microscopy and circular dichroic spectroscopy
Authors: Shibata Mikihiro , Inoue Keiichi , Ikeda Kento , Konno Masae , Singh Manish , Kataoka Chihiro , Abe-Yoshizumi Rei , Kandori Hideki , Uchihashi Takayuki 
Published: May 2018

AbstractOligomeric assembly is a common feature of membrane proteins and often relevant to their physiological functions. Determining the stoichiometry and the oligomeric state of membrane proteins in a lipid bilayer is generally challenging because of their large size, complexity, and structural alterations under experimental conditions. Here, we use high-speed atomic force microscopy (HS-AFM) to directly observe the oligomeric states in the lipid membrane of various microbial rhodopsins found within eubacteria to archaea. HS-AFM images show that eubacterial rhodopsins predominantly exist as pentamer forms, while archaeal rhodopsins are trimers in the lipid membrane. In addition, circular dichroism (CD) spectroscopy reveals that pentameric rhodopsins display inverted CD couplets compared to those of trimeric rhodopsins, indicating different types of exciton coupling of the retinal chromophore in each oligomer. The results clearly demonstrate that the stoichiometry of the fundamental oligomer of microbial rhodopsins strongly correlate with the phylogenetic tree, providing a new insight into the relationship between the oligomeric structure and function-structural evolution of microbial rhodopsins.
Evolution of oncogenic signatures of mutation hotspots in tyrosine kinases supports the atavistic hypothesis of cancer
Authors: Chen Weiran , Li Yixue , Wang Zhen 
Published: May 2018

AbstractCancer has been shown as an evolutionary process emerging hallmarks that are reminiscent of unicellular organisms. Since cancer is mostly driven by somatic mutations, especially by oncogenic hotspot mutations, we proposed a molecular atavism of cancer caused by gain-of-function mutations in oncogenes. As tyrosine kinase (TK) family contains the largest subgroup of oncogenes with hotspot mutations, we traced the most predominant mutation hotspots of TK oncogenes across phylogeny with the domain information and adjacent sequences integrated as onco-signatures. We detected 9 out of 17 TK oncogenes with onco-homologs possessing an onco-signature, which could be divided into two classes by whether their onco-homologs existed in mammals or not. In Class I we identified mammalian onco-homologs assuming oncogenic functions with onco-signatures always intact in cancer, such as HCK and LYN. In Class II with no bona fide mammalian onco-homologs, Pyk2, a protist onco-homolog with an onco-signature of BRAF was found assuming oncogenic-like functions. Onco-signatures in both classes root deep in the primitive system. Together, these evidences supported our proposal that cancer can be driven by reverse evolution of oncogenes through gain-of-function mutations. And also for the first time, we provided the specific targets for experimental verification of the atavistic hypothesis of cancer.
Exploring the Reusability of Synthetically Contaminated Wastewater Containing Crystal Violet Dye using Tectona grandis Sawdust as a Very Low-Cost Adsorbent
Authors: Mashkoor Fouzia , Nasar Abu , Inamuddin  , Asiri Abdullah M. 
Published: May 2018

AbstractPresent investigation explores the possible reusability of synthetically contaminated wastewater containing crystal violet (CV) organic dye using Tectona grandis sawdust (TGSD) waste as a very low-cost adsorbent. The adsorbent was characterized by proximate, SEM/EDX, FTIR, and XRD analyses. Batch adsorption studies were carried under changing conditions of contact time, the initial concentration of CV, pH, TGSD dose, TGSD particle size, and temperature. The experimental data were tested using Langmuir, Freundlich and Temkin isotherm models, and the data were best followed by Langmuir one. The kinetic results were examined in the light of different models and pseudo-second-order was obtained to be best obeyed. The values of ΔH° (28.642 kJ/mol), ΔG° (-10.776 to -7.080 kJ/mol) and ΔS° (121.8 J/K/mol) in the temperature range of 293–323 K suggested the overall process to be spontaneous, endothermic and associated with an increase in randomness. On the basis of experimental results and their analyses, it has been established that TGSD is one of the most effective adsorbents among those obtained from the domestic, agricultural and industrial wastes. Thus this adsorbent can be effectively utilized to make the impure wastewater reusable.
Using genetic markers to unravel the origin of birds converging towards pre-migratory sites
Authors: Bounas Anastasios , Tsaparis Dimitris , Gustin Marco , Mikulic Kresimir , Sarà Maurizio , Kotoulas Georgios , Sotiropoulos Konstantinos 
Published: May 2018

AbstractIdentifying patterns of individual movements in spatial and temporal scales can provide valuable insight into the structure of populations and the dynamics of communities and ecosystems. Especially for migrating birds, that can face a variety of unfavorable conditions along their journey, resolving movements of individuals across their annual cycle is necessary in order to design better targeted conservation strategies. Here, we studied the movements of a small migratory falcon, the Lesser Kestrel (Falco naumanni), by genetically assigning feathers from individuals of unknown origin that concentrate in large roosts during the pre-migratory period. Our findings suggest that birds from multiple breeding populations in the Central and Eastern Mediterranean region move towards two pre-migratory sites in the Balkans, some of them detouring greatly from their expected flyways, travelling more than 500 km to reach these sites and prepare for the post-nuptial migration. By identifying the origin of individuals using the pre-migratory sites, not only we provide a better understanding of the possible impact of local threats at these sites on multiple breeding populations but also inform the design of effective conservation actions for the species.
Spatial and temporal changes in extracellular elastin and laminin distribution during lung alveolar development
Authors: Luo Yongfeng , Li Nan , Chen Hui , Fernandez G. Esteban , Warburton David , Moats Rex , Mecham Robert P. , Krenitsky Daria , Pryhuber Gloria S. , Shi Wei 
Published: May 2018

AbstractLung alveolarization requires precise coordination of cell growth with extracellular matrix (ECM) synthesis and deposition. The role of extracellular matrices in alveogenesis is not fully understood, because prior knowledge is largely extrapolated from two-dimensional structural analysis. Herein, we studied temporospatial changes of two important ECM proteins, laminin and elastin that are tightly associated with alveolar capillary growth and lung elastic recoil respectively, during both mouse and human lung alveolarization. By combining protein immunofluorescence staining with two- and three-dimensional imaging, we found that the laminin network was simplified along with the thinning of septal walls during alveogenesis, and more tightly associated with alveolar endothelial cells in matured lung. In contrast, elastin fibers were initially localized to the saccular openings of nascent alveoli, forming a ring-like structure. Then, throughout alveolar growth, the number of such alveolar mouth ring-like structures increased, while the relative ring size decreased. These rings were interconnected via additional elastin fibers. The apparent patches and dots of elastin at the tips of alveolar septae found in two-dimensional images were cross sections of elastin ring fibers in the three-dimension. Thus, the previous concept that deposition of elastin at alveolar tips drives septal inward growth may potentially be conceptually challenged by our data.
Composite binocular perception from dichoptic stimulus arrays with similar ensemble information
Authors: Cha Oakyoon , Blake Randolph , Chong Sang Chul 
Published: May 2018

AbstractWe view the world through laterally displaced eyes that generate two streams of image signals differing slightly in their perspectives of the visual scene. The brain derives three-dimensional structures from these two image streams by establishing binocular matches and computing image disparities between the two eyes’ views. Since the binocular matching problem can have multiple, alternative solutions, vision relies on several strategies to determine the most probable matches. The current study investigated whether the visual system might utilize regularities among neighbouring features (feature ensembles) when confronting this problem. We hypothesized that binocular perception with unlikely, anomalous ensembles would indicate unsuccessful binocular matches. We made dichoptic stimulus arrays of coloured circles and manipulated the colour similarity of stimulus items to produce probable or unusual ensembles when superimposed. Using binocular rivalry as a proxy index, we found that composite perception of dichoptic arrays was more stable when the stimulus items shared similar colours, and that unusual ensembles induced binocular rivalry. Our results suggest that binocular ensembles can be utilized to detect unsuccessful binocular matches, thus uncovering a potentially useful supplemental strategy for identifying binocular matches when viewing potentially confusing visual scenes containing redundant visual features.
Responses to salinity stress in bivalves: Evidence of ontogenetic changes in energetic physiology on Cerastoderma edule
Authors: Peteiro Laura G. , Woodin Sarah A. , Wethey David S. , Costas-Costas Damian , Martínez-Casal Arantxa , Olabarria Celia , Vázquez Elsa 
Published: May 2018

AbstractEstuarine bivalves are especially susceptible to salinity fluctuations. Stage-specific sensibilities may influence the structure and spatial distribution of the populations. Here we investigate differences on the energetic strategy of thread drifters (3–4 mm) and sedentary settlers (9–10 mm) of Cerastoderma edule over a wide range of salinities. Several physiological indicators (clearance, respiration and excretion rates, O:N) were measured during acute (2 days) and acclimated responses (7 days of exposure) for both size classes. Our results revealed a common lethal limit for both developmental stages (Salinity 15) but a larger physiological plasticity of thread drifters than sedentary settlers. Acclimation processes in drifters were initiated after 2 days of exposure and they achieved complete acclimation by day 7. Sedentary settlers delay acclimation and at day 7 feeding activity had not resumed and energetic losses through respiration and excretion were higher at the lowest salinity treatment. Different responses facing salinity stress might be related to differences in habitat of each stage. For sedentary settlers which occupy relatively stable niches, energy optimisation include delaying the initiation of the energetically expensive acclimation processes while drifters which occupy less stable environments require a more flexible process which allow them to optimize energy acquisition as fast as possible.
Effects of parental acclimation and energy limitation in response to high CO2 exposure in Atlantic cod
Authors: Stiasny M. H. , Mittermayer F. H. , Göttler G. , Bridges C. R. , Falk-Petersen I.-B. , Puvanendran V. , Mortensen A. , Reusch T. B. H. , Clemmesen C. 
Published: May 2018

AbstractOcean acidification (OA), the dissolution of excess anthropogenic carbon dioxide in ocean waters, is a potential stressor to many marine fish species. Whether species have the potential to acclimate and adapt to changes in the seawater carbonate chemistry is still largely unanswered. Simulation experiments across several generations are challenging for large commercially exploited species because of their long generation times. For Atlantic cod (Gadus morhua), we present first data on the effects of parental acclimation to elevated aquatic CO2 on larval survival, a fundamental parameter determining population recruitment. The parental generation in this study was exposed to either ambient or elevated aquatic CO2 levels simulating end-of-century OA levels (~1100 µatm CO2) for six weeks prior to spawning. Upon fully reciprocal exposure of the F1 generation, we quantified larval survival, combined with two larval feeding regimes in order to investigate the potential effect of energy limitation. We found a significant reduction in larval survival at elevated CO2 that was partly compensated by parental acclimation to the same CO2 exposure. Such compensation was only observed in the treatment with high food availability. This complex 3-way interaction indicates that surplus metabolic resources need to be available to allow a transgenerational alleviation response to ocean acidification.
Non-spherical oscillations drive the ultrasound-mediated release from targeted microbubbles
Authors: Lajoinie Guillaume , Luan Ying , Gelderblom Erik , Dollet Benjamin , Mastik Frits , Dewitte Heleen , Lentacker Ine , de Jong Nico , Versluis Michel 
Published: May 2018

AbstractUltrasound-driven microbubbles are attractive for a variety of applications in medicine, including real-time organ perfusion imaging and targeted molecular imaging. In ultrasound-mediated drug delivery, bubbles decorated with a functional payload become convenient transport vehicles and offer highly localized release. How to efficiently release and transport these nanomedicines to the target site remains unclear owing to the microscopic length scales and nanoseconds timescales of the process. Here, we show theoretically how non-spherical bubble oscillations lead first to local oversaturation, thereby inducing payload release, and then to microstreaming generation that initiates transport. Experimental validation is achieved through ultra-high-speed imaging in an unconventional side-view at tens of nanoseconds timescales combined with high-speed fluorescence imaging to track the release of the payload. Transport distance and intrinsic bubble behavior are quantified and agree well with the model. These results will allow for optimizing the therapeutic use of targeted microbubbles for precision medicine.
Identification of slot discharges in rotating machine insulation system using variable frequency PD measurement
Authors: Nair Ramesh P. , B. Vishwanath Sumangala , B. Rao Nageshwar 
Published: May 2018

Slot discharge studies are very important from the insulation diagnosis perspective. Further in practice, testing of rotating machines with power frequency requires sources which are quite bulky and costly. Instead if the diagnosis is carried out at lower frequencies (<50 Hz), the size and cost of the test source can be reduced significantly. Therefore, it is important to know whether the study at low frequencies can be considered equivalent to study at power frequency. Hence, in this study, a slot discharge phenomenon occurring in a rotating machine insulation system was investigated experimentally at different frequencies (50, 10, 1 and 0.1 Hz). Slot discharges are known to have a distinct phase resolved partial discharge pattern for power frequency (50/60 Hz) excitation. These distinct patterns are useful in identifying the presence of slot discharge activity in rotating machines. Slot discharges were created on a 6.6 kV mica‐epoxy stator coil and the slot discharge characteristics measured at different frequencies are compared. Slot discharge measurements were repeated by varying the air gap between the insulation surface and grounded steel plate. The changes in slot discharge characteristics due to the increase in air gap were found similar at all frequencies. The comparison suggests that the identification of slot discharge is also possible from the partial discharge (PD) measurement at low frequencies.