bluuebunny/crossref_metadata_2025_split huggingface dataset:
IMMU-14. TRANS-SPECIES ANALYSIS OF REPLICATION-REPAIR DEFICIENT (RRD) MEDULLOBLASTOMA AND RESPONSE TO IMMUNE CHECKPOINT INHIBITION: AN IRRDC REPORT
Authors: Das Anirban , Fernandez Nicholas , Levine Adrian , Smith Kyle , Wang Evan , Galati Melissa , Aamir Zoya , Chung Jill , Negm Logine , Friedman Hope , O’Flaherty Katharine , Crump Owen , Trinh Quang , Nunes Nuno , Bianchi Vanessa , Stengs Lucie , Edwards Melissa , Stein Lincoln , Bouffet Eric , Taylor Michael , Northcott Paul , Ramaswamy Vijay , Hawkins Cynthia , Tabori Uri 
Published: November 2024

Abstract

BACKGROUND
Replication-repair deficiency (RRD) stemming from mismatch repair and polymerase proofreading gene defects (MMRD/PPD) lead to hypermutant childhood cancers, most frequently brain tumors. While medulloblastoma is reported, the clinical, genomic and immune landscape remains unknown.

METHODS
We analysed the genome, methylome, transcriptome (bulk, single-nuclei) and immune-microenvironment of the largest cohort of RRD-medulloblastoma patients enrolled by the International RRD Consortium and correlated these to clinical outcomes. RRD mice-models were used to preclinically assess response to immunotherapy. Results:

RESULTS
RRD-medulloblastoma (n=43) were enriched for anaplasia (61%) and localised disease (77%). Methylation/nano-string-based subgrouping failed to classify 40%, while the remaining clustered with the SHH-subgroup. Copy-number changes were notably infrequent (&lt;20%). All tumors harboured hypermutation and microsatellite instability in contrast to non-RRD controls (p&lt;0.0001). Pathogenic variants were frequent in POLE/POLD1 (80%), TP53 (48%) and SHH-pathway genes (PTCH1, SUFU, SMO: 56%). Interestingly, some tumors additionally had glioma-driver alterations (ATRX, NF1: ~50%), similar to RRD cerebellar glioblastoma, but distinct from both non-RRD medulloblastoma (n=791) and hemispheric glioblastoma (n=733) controls. Moreover, although bulk-transcriptome matched non-RRD SHH medulloblastoma, single-nuclei analyses suggested an earlier cell-of-origin potentially explaining the heterogenous phenotypes resulting from the driver mutations. Uniquely, immune analyses (gene expression and immunohistochemistry) demonstrated high intra-tumoral CD8 T-cell infiltration. Three-year progression-free survival was 60%. Outcome was worse for RRD-medulloblastoma harbouring TP53-mutation (p=0.04) and failing subgroup-classification (p=0.004). Nestin/Cre MSH2-/- POLE;p.S459F mice developing medulloblastoma recapitulated human disease and demonstrated response to anti-PD1 monotherapy. Recurrent/progressive human tumors including those harbouring TP53-mutations exhibited radiological responses to anti-PD1 monotherapy, which was associated with prolonged ongoing survival in comparison to those not treated with checkpoint-inhibitors (p=0.02).

CONCLUSIONS
Hypermutant RRD-medulloblastoma reveal heterogenous phenotypes due to unique spectrum of driver mutations and an early cell of origin. Their immune-hot microenvironment allows successful salvage treatment with checkpoint-inhibitors for those failing chemo-radiation, including the high-risk SHH/TP53-mutant and unclassified subgroups.
IMMU-16. ANTI-VEGF TREATMENT EFFECT AGAINST GLIOMA IS IMMUNE DEPENDENT AND MEDIATED BY ENHANCED T CELL ACTIVITY
Authors: Maire Cecile , Mohme Malte , Fita Krystian , Reetz Merle , Heinemann Sarina , Tolosa Eva , Alawi Malik , Casar Christian , Spohn Michael , Gempt Jens , Westphal Manfred , Lamszus Katrin 
Published: November 2024

Abstract
Immunotherapy trials in glioblastoma patients increasingly avoid immunosuppressive steroids and consider bevacizumab as alternative anti-edema treatment. Since VEGF is also a potent immunosuppressive factor, we explored the dimension and mechanisms of immune-mediated effects of anti-VEGF treatment. Murine glioma cells were injected intracerebrally into C57BL/6 wild-type mice or immunodeficient Pfp/Rag2 knockout mice and animals were treated with B20 (anti-murine VEGF) or dexamethasone. Immune cells were profiled by flow cytometry, and RNAseq was performed on sorted tumor and immune cells at different timepoints. B20 prolonged the survival of immunocompetent mice but not of Pfp/Rag2 knockout mice, indicating that the immune system is essential for its effect. At an early timepoint when controls became symptomatic, B20 “early” tumors (B20-ea) showed increased infiltration with T cells and myeloid cells, and decreased vascularization, whereas B20 tumors at the survival endpoint resembled IgG-controls. Gene expression in B20-ea tumor cells was dominated by hypoxia, neural development, invasion, TGF-β, Notch and Wnt signatures as well as concerted upregulation of Kmt2 H3K4 methyltransferases. In CD11b+ myeloid cells from B20-ea tumors, M1 hallmark genes and T cell activation genes were upregulated, while M2 genes were downregulated. Deconvolution revealed a transient shift towards pro-immune microglia/macrophages as well as increased NK cells and DCs. In CD8+ and CD4+ T cells, B20 increased the expression of S1pr1 and α/β TCR genes. The proportion of progenitor-like exhausted CD8+ cells, which are responsive to PD-1 blockade, was increased in B20-ea. In CD4+ cells, B20 caused skewing towards TFH, while dexamethasone increased TH2 cytokine expression. Depletion experiments demonstrated that CD8+ and CD4+ T cells but not NK cells were necessary for the survival-prolonging effect of B20. To conclude, anti-VEGF therapy has significant immunostimulatory effects which are, however, largely transient, so that an early treatment window of opportunity may exist during which it could actively support immunotherapy.
IMMU-31. DAMAGE RESPONSE FROM SYSTEMIC RNA VACCINATION RESTORES HUMORAL IMMUNITY IN GLIOBLASTOMA
Authors: Moor Rachel , Aghaee Mahya , Carrera-Justiz Sheila , Qdaisat Sadeem , Xie Chao , Soni Dhruvkumar , von Roemeling Christina , DeVries Anna , Wummer Brandon , Weidert Frances , Chardon-Robles Jonathan , Ligon John , Castillo Paul , Silver Natalie , Kline Cassie , Prados Michael , Mueller Sabine , Hwang Eugene , Rahman Maryam , Ghiaseddin Ashley , Mitchell Duane , Seligson Nathan , Mendez-Gomez Hector , Moore Helen , Sayour Elias 
Published: November 2024

Abstract
Therapies against glioblastoma (GBM) remain stymied by poor penetration across the blood-brain barrier (BBB) and systemic immunotolerance. These outcomes necessitate development of therapies simultaneously targeted to tumors while engineering peripheral immunity to co-localize for synergistic responses. We developed RNA loaded lipid particles (LPs) to simultaneously function as inducers of cytotoxic responses in the GBM tumor microenvironment (TME) and as systemic activators of peripheral immunity. RNA-LP mediated response was studied in mice bearing KR158b tumors and in canines and humans with spontaneous glioma and glioblastoma respectively. We found that RNA-LPs could localize to the brain TME of animals bearing murine gliomas and rapidly upregulate damage associated signaling pathways including p53-CDKN2A. This correlates with increased gene signatures for complement and proteosome processing. Simultaneously, in the periphery, RNA-LPs increase integrin expression on activated T cells and ICAM expression in brain tumors helping steer T cell translocation across the BBB. In canines with malignant gliomas, response to RNA-LPs correlated with increasing tumor size suggesting pseudoprogression. Similar to murine glioma, canine gliomas harvested within 48h of vaccine administration demonstrated rapid increases in complement and p53 pathway activation. In one human patient treated with RNA-LPs per NCT04573140 (PNOC020 trial), we demonstrate biopsy confirmed pseudoprogression with increases in p53 pathway signaling and complement activation. In post-treatment tumor biopsy samples, there was increased hyperexpanded post-infusion intratumoral IgH clones. Systemic administration of RNA-LP elicits damage response in the TME that predisposes complement activation and humoral immunity. Coupled with peripheral recruitment of T cells that can translocate across the BBB, RNA-LPs elicit potent bi-directional adaptive immunotherapy against GBM.
IMMU-39. CAR T CELLS TARGETING ICAM-1 SHOW A SURVIVAL BENEFIT IN BOTH SYNGENEIC AND XENOGRAFT GLIOMA MOUSE MODELS
Authors: Soballa Melanie , Mastall Maximilian , Villars Danielle , Hänsch Lena , Mayoux Maud , Tugues Sonia , Weller Michael , Roth Patrick 
Published: November 2024

Abstract

BACKGROUND
Chimeric antigen receptor (CAR) T-cell therapy, while effective against hematological malignancies, has faced significant hurdles in its application to solid tumors. Challenges in CAR T-cell therapy for glioblastoma include the immunosuppressive tumor microenvironment, the limited infiltration of CAR T-cells into the tumor, heterogeneous target expression and antigen escape. In this study, we focused on targeting Intracellular adhesion molecule-1 (ICAM-1), a protein expressed on both glioma cells and tumor-associated cells like macrophages and endothelial cells.

METHODS
Glioblastoma and normal brain tissue microarray sections (TMA) were immunohistochemically analyzed for ICAM-1 expression. Second-generation human and murine ICAM-1-targeting CAR T cells were generated by lentiviral or retroviral transduction of T cells from healthy human donors or murine splenocytes. Their efficacy was evaluated in co- culture assays with human and murine glioma and endothelial cell lines. Syngeneic and xenograft orthotopic glioma mouse models were used to assess the in vivo activity of CAR T cells. Ex vivo analysis of these tumors included examination of changes in the tumor microenvironment using high-dimensional flow cytometry.

RESULTS
Immunohistochemical staining of TMA revealed a significant upregulation of ICAM-1 in human glioblastoma tissue compared to normal brain tissue. Single-cell RNA sequencing data from glioblastoma specimens showed a high level of ICAM-1 expression in tumor- associated macrophages. Human and murine ICAM-1-targeting CAR T cells displayed strong lysis of ICAM-1-expressing glioma and endothelial cells in vitro. Intratumoral application of CAR T cells resulted in a survival benefit in both syngeneic and xenograft glioma mouse models. Ex vivo analysis of the tumor microenvironment revealed treatment-induced changes from our CAR T cell therapy and indicates potential for further enhancements.

CONCLUSION
Our study demonstrates that ICAM-1-targeting CAR T cells improve survival in human and murine glioma mouse models. Flow cytometry of the tumor microenvironment reveals therapy-induced changes, for future improvements of the CAR T cell therapy.
IMMU-41. GBM PLATELET HYPERACTIVITY DRIVES THE IMMUNOSUPPRESSIVE TME IN A SEX-DEPENDENT MANNER
Authors: Sloan Anthony , Bukenya George , Tack Liza , Horbinski Craig , Khorana Alok , Gupta Anirban Sen , Nieman Marvin , Cameron Scott , Lathia Justin 
Published: November 2024

Abstract
Cancer-related thrombosis is the second leading cause of death for cancer patients, including those with glioblastoma (GBM), the most common primary malignant brain tumor. Patients with GBM have a 30% risk of venous thromboembolism. Moreover, sex biases are well established in GBM, with men 1.6-fold more likely to develop GBM and exhibiting a poorer prognosis than females. GBM is extremely difficult to treat due to its highly immunosuppressive tumor microenvironment (TME), often infiltrated with suppressive myeloid populations and a reduction in T-cells intratumorally and systemically. Our group has recently demonstrated these sex-biases in survival are due to differences in the immune cell populations making up the TME. Despite these findings, there is limited information as to how a hyper-thrombotic state contribute to the immunosuppressive TME. Additionally, the role that sex biases play in these mechanisms has not been explored. Our previous work demonstrated that thrombin, a major platelet activator through PAR1 and PAR4 receptor signaling, is secreted from cancer stem cells into the tumor microenvironment. We now show that GBM patient have elevated levels of the thrombin-antithrombin complex and have increased PAR4 receptor mediated platelet activation. Similarly, we show that tumor bearing mice have elevated PAR4 receptor mediated platelet activation relative to non-tumor bearing mice. We further demonstrate pharmacologically targeting the thrombin-PAR4 signaling axis in murine GBM models prolongs survival in females but has not affect in males by preventing female platelet hyperactivity and subsequently increasing the number and function of tumor infiltrating CD8+ T-cells. These findings demonstrate how activated platelets interact and regulate immune cell populations in GBM. These results suggest that the hyper-thrombotic state seen in many GBM patients simultaneously contributes to the immunosuppressive TME. In addition, these results identify therapeutic strategies to leverage the platelet hyperactivity seen in GBM by hyperactive thrombin-PAR4 for sex-dependent therapeutic purposes.
IMMU-42. UNRAVELING THE ROLE OF NLRX1 IN GLIOBLASTOMA TUMOR MICROENVIRONMENT
Authors: meena Durgesh , Rajkhowa Sushmita , Jha Sushmita 
Published: November 2024

Abstract
•Gliomas are primary brain tumors that develop from glial cells within the central nervous system (CNS) and are among the deadliest human cancers. Glioblastoma (GBM) is the most aggressive glioma. Innate immune cells such as microglia and macrophages account for &gt;50% of the cellular population within the GBM microenvironment. Innate immune cells express pattern recognition receptors (PRRs). NLRX1 is a PRR that regulates diverse signaling pathways and cellular processes including antiviral signaling, ROS production, apoptosis, autophagy, metabolic homeostasis, etc. Additionally, the tumor-suppressive and tumor-promoting functions of NLRX1 have been observed in many cancer types. For example, the tumor-suppressive role of NLRX1 has been observed in colitis-associated carcinogenesis, pancreatic cancer, and primary breast cancer. In contrast, the tumor-promoting role of NLRX1 was found in basal-like and metastatic breast carcinoma. Hence, the effect of NLRX1 on cancer may be context-dependent on cancer type or cell type aided by differences in the microenvironment. Further, how NLRX1 regulates GBM pathophysiology remains largely unexplored. This study aims to determine the expression pattern of NLRX1 in GBM cells and GBM-associated innate immune cells and investigate how NLRX1 expression regulates various cellular processes in GBM cell lines to regulate GBM pathophysiology. We report that NLRX1 is differentially expressed in GBM cell lines, GBM-associated innate immune cells, and glioma patient tissues. si-RNA-mediated silencing of Nlrx1 decreases the ability of the GBM cell line, LN-229 to proliferate and migrate. Further, Nlrx1-/- GBM cells show increased tunneling nanotube (TNT) formation capabilities. TNTs help in metabolic homeostasis maintenance by enabling the exchange of subcellular organelles such as mitochondria and endoplasmic reticulum. Nlrx1-/- GBM cells exhibit attenuated ability to form 3D spheroids. This research will aid the understanding of GBM pathophysiology, leading to novel diagnostic/prognostic markers and the discovery of signaling pathways that, in turn, may help create better GBM therapy approaches and improve overall survival.
IMMU-52. A NOVEL MHC-INDEPENDENT MECHANISM FOR CD8+ T CELL KILLING
Authors: Lerner Emily , Woroniecka Karolina , Wilkinson Daniel , Mohan Aditya , Lorrey Selena , Waibl-Polania Jessica , Wachsmuth Lucas , Hoyt-Miggelbrink Alexandra , Jackson Joshua , Cui Xiuyu , Sampson John , Patel Anoop , Khasraw Mustafa , Gunn Michael , Fecci Peter 
Published: November 2024

Abstract
The long-accepted paradigm for both cellular and antitumor immunity relies upon tumor cell kill by CD8+ T cells recognizing cognate antigens presented in the context of target cell major histocompatibility complex class I (MHC I) molecules. Likewise, a classically described mechanism of tumor immune escape is tumor MHC-I downregulation. Here, in contrast to the decades old model of T cell immunity, we instead report that CD8+ T cells maintain the capacity to kill tumor cells that are entirely devoid of MHC-I expression. This capacity proves to be dependent instead on interactions between T cell NKG2D and tumor NKG2D ligands (NKG2DL), the latter of which are highly expressed on MHC-loss variants. Necessarily, tumor cell kill in these instances is antigen-independent, although prior T cell antigen-specific activation is required and can be furnished by myeloid cells or even neighboring MHC-replete tumor cells. In this manner, adaptive priming can beget innate killing. These mechanisms are active in vivo in mice, as well as in vitro in human tumor systems, and are obviated by NKG2D knockout or blockade. These studies challenge the long-advanced notion that downregulation of MHC-I is a viable means of tumor immune escape, and instead identify the NKG2D/NKG2DL axis as a therapeutic target for enhancing T cell-dependent anti-tumor immunity against MHC loss variants.
IMMU-58. BCAT1 TARGETED METABOLIC REPROGRAMMING PLAYS CRITICAL ROLES IN MODULATING MYELOID DERIVED SUPPRESSOR CELL FUNCTION IN GLIOBLASTOMA
Authors: Jackson Christina , Ning Yi , Jones Kate , Simon Celeste , Bailis Will 
Published: November 2024

Abstract
A key component that has limited the efficacy of immunotherapy in glioblastoma (GBM) is the significant infiltration of immunosuppressive myeloid cells. Our previous work characterized myeloid derived suppressor cells (MDSCs) unique to GBM that drive tumor growth and immune suppression. Transcriptomic and flow cytometric analyses demonstrated that the most induced programs in these MDSCs are dominated by metabolic and mTOR pathways. Therefore, we aimed to understand the role of metabolic reprogramming in MDSC differentiation and immunosuppressive function. Using single cell RNA sequencing, we identified overexpression of enzymes and transporters involved in branched-chain amino acid (BCAA) metabolism, notably branched chain aminotransferase 1 (BCAT1), the first enzyme in the metabolic pathway. Intriguingly, this was only found in specific populations of early and monocytic MDSCs (E-MDSCs, M-MDSCs), and not polymorphonuclear MDSCs (PMN-MDSCs). Using established MDSC modeling systems, we found that M-MDSC differentiation and T cell suppressive function are dependent on BCAAs and can be hindered by pharmacological inhibition of BCAT1 activity or genetic knockout of BCAT1. We also establish that the influence of BCAA on M-MDSC function is specifically reliant on the BCAT1-mediated step of BCAA metabolism. To determine the underlying mechanism driving BCAT1’s impact on M-MDSC function, we evaluated the activity of signaling pathways known to be critical to M-MDSCs including the mTORC1 pathway. We found that the impact of BCAA and BCAT1 activity on M-MDSC function is abrogated by inhibition of mTORC1 pathway with reduction in M-MDSC differentiation and activity. Consistent with our single cell RNA sequencing analysis, modulation of BCAA levels and BCAT1 activity had no impact on PMN-MDSCs. Our results underscore the critical role of BCAT1 in preferentially modulating M-MDSC activity through mTORC1 signaling. Our finding paves the way for discovery of a targetable therapeutic approach to harness immunometabolism in myeloid cells to develop novel immune therapies.
IMMU-63. MESSENGER RNA CHALLENGE PREDICTS CANCER IMMUNOGENICITY AND RESPONSE TO CHECKPOINT INHIBITORS
Authors: Castillo Paul , Ogando-Rivas Elizabeth , Geffrard Hilary , Pepe Alfonso , Nguyen Duy , Pedro Diego , Zhang Dingpeng , DeVries Anna , Qdaisat Sadeem , Grippin Adam , Rahman Maryam , Weidert Frances , Milner Rowan , Huang Jianping , Silver Natalie , Ligon John , Carrera-Justiz Sheila , Mitchell Duane , Mendez-Gomez Hector , Sawyer Gregory , Sayour Elias 
Published: November 2024

Abstract

BACKGROUND
Checkpoint inhibition has emerged as a promising cancer therapeutic approach. Checkpoint inhibitors (CIs) function by overcoming the adaptive T cell exhaustion induced by solid tumor microenvironment including brain tumors, particularly in the neoadjuvant setting. Unfortunately, not every patient who receives CIs will unlock effective antitumor immunity. Objectives: Microsatellite instability and high mutational burden are considered key criteria to predict response to CIs. However, only a minority of patients will fulfill these criteria suggesting the need to develop innovative technologies to identify CI responsive patients.

METHODS
To determine whether glioma tumors will respond to CIs, we have developed a novel multilamellar mRNA-lipid particle tool to predict response ex vivo. Messenger RNA is complexed into multilamellar lipid particles to form aggregates (RNA-LPAs) to induce pathogen recognition receptor signaling in tumor cells to define an inflammatory profile as an indirect predictor to CI response.

RESULTS
In naïve mice, we found that multilamellar RNA-LPAs induce activation of Type I IFN system as supported by decreased secretion of IFN-α in MyD88 KO mice compared with wild type mice. We next selected murine glioma cell lines with known response profile to CIs (responders – GL261 and SMA560 vs non-responders – KR158b and CT2A). Prior to evaluation of cytokine profiling, successful uptake of RNA-LPAs was achieved in all cell lines. In 2D cell lines cultures and their corresponding 3D tumor spheroids, we demonstrated that treatment of CI responsive murine glioma models showed a differential cytokine signature (increased secretion of IFN-β/IL-6/CCL4 versus non-responsive models).

CONCLUSION
We identified a unique inflammatory signature after ex vivo RNA-LPAs challenge that correlates with checkpoint blockade activity. These findings allow for creation of a diagnostic assay to quickly assess tumor immunogenicity, allowing for informed immunotherapeutic treatment.
INNV-05. DEVELOPMENT OF A LABEL-FREE PLASMONIC OPTICAL BIOSENSOR FOR INTRAOPERATIVE DETECTION OF TUMOR TISSUE IN GLIOBLASTOMA
Authors: García-Milán Víctor , Franco Alfredo , Zvezdanova Margarita Estreya , Marcos Sara , Martín-Láez Rubén , Moreno Fernando , Fernández-Luna José L , Velásquez Carlos 
Published: November 2024

Abstract
Safe maximal resection of patients with glioblastoma remains a surgical challenge due to the invasive nature of the tumor and the difficulty in distinguishing tumor margins during resection. Several tools are currently used for this purpose, such as, confocal laser endomicroscopy and fluorescence-guided surgery. In this context, biosensors based on plasmonic technology using the extraordinary optical transmission (EOT) phenomenon can help to distinguish between tumor and surrounding tissue based on their optical properties. We developed a biosensor utilizing EOT through a nanostructured gold matrix with 220 nm diameter holes and conducted a prospective study in 35 GBM patients. Paired samples of tumor and peritumoral tissue were collected during surgery. Each sample’s optical imprint was analyzed, revealing significant differences in refractive indices (RI). Tumor tissue showed higher RI values (1.350, IQR 1.344–1.363) compared to peritumoral tissue (1.341, IQR 1.339–1.349) with a p-value of 0.0047. The receiver operating characteristic (ROC) curve indicated the biosensor’s ability to differentiate the tissues (AUC = 0.8779, p &lt; 0.0001). An optimal RI cut-off point of 0.003 was determined, with the biosensor achieving 81% sensitivity and 80% specificity. Our results indicate that this plasmonic technology-based biosensor could have a significant impact on the surgical treatment of glioblastoma by providing a label-free tool for tumor margin discrimination and improving the accuracy of glioblastoma surgery. Future research will focus on optimizing the nanoarchitecture of the biosensor to further improve its sensitivity and specificity, as well as exploring its applicability to other cancer types by analyzing the biomarkers responsible for the different RIs of the footprints.