bluuebunny/crossref_metadata_2025_split huggingface dataset:
Physiological and behavioural responses in blue foxes (Alopex lagopus) : comparisons between space quantity and floor material
Authors: Korhonen H. , Jauhiainen L. , Niemelä P. , Harri M. , R. Sauna-aho  
Published: May 2019

AbstractWelfare-related physiological and behavioural responses were studied in farmbred blue foxes (Alopex lagopus). Comparisons in space quantity were made between two different-sized shed cages (50 cm long (W50) and 120 cm long (W120); each 105 cm wide ✕ 70 cm high) and for one out-of-shed pen (5 m long ✕ 3 m wide ✕ 1·8 m high; W500). Each option had a wire-mesh floor. Furthermore, we tested how floor material affects responses by comparing the W500 foxes in wire-mesh floor pens with foxes housed in earthen floor pens (E500: 5 m long ✕ 3 m wide ✕ 1·8 m high). Each test group comprised 20 juvenile males maintained in pairs. The experiments lasted from weaning in July to pelting in December. Final body weights of the W500 foxes were significantly lower than those of the W50 or W120 foxes. Claw length of back foot was longer for E500 than for W500 foxes. Posture of front feet was the most folded for W50 and the least folded for E500 foxes. Breaking strength of tibia was highest for foxes housed on the earthen floor (E500). Gastrocnemius muscle succinate dehydrogenase activity tended to decrease and the number of leucocytes tended to increase with cage size. Alanine-aminotransferase and aspartate-amino transferase activities were significantly higher in foxes housed in shed cages (W50, W120) than in enclosures (W500, E500). Creatine-kinase activity tended to decline with increasing cage size. Highest and lowest open field activity was found for E500 and W50 foxes in both wire-mesh and earthen floor test arenas. Some differences were found in body weight-related organ sizes between groups. Heart weight was significantly higher in W500 than in W50 or W120 foxes. Brain weight was significantly lower in W50 than in W500 foxes. Liver weight increased with increasing cage size. Capture time was significantly lower for W50 and W120 foxes than for W500 or E500 foxes. Cortisol levels after capture were significantly higher in foxes from enclosures (W500, E500) than in those from shed cages (W50, W120), but after ACTH stimulation the levels were similar in each group. Rectal temperatures after restraint were highest in foxes from W500. Fur properties of W500 and E500 foxes were poorer than those of W50 or W120 foxes.
A genetic analysis of maternal behaviour score in Scottish Blackface sheep
Authors: Lambe N. R. , Conington J. , Bishop S. C. , Waterhouse A. , Simm G. 
Published: May 2019

AbstractUnder field conditions, ewe behaviour was quantified by maternal behaviour score (MBS)-a six-point scale which assesses ewe flight distance when lambs are handled for the first time, within 24 h of birth (adapted from O’Connor et al., 1985). MBS was measured on 847 Scottish Blackface ewes on two experimental hill farms, over a maximum of four parities. Live weights of lambs born to these ewes were measured at birth, marking (average age of 42 days) and weaning (average age of 120 days).MBS was significantly higher ( P < 0·05) for ewes with more lambing experience (multiparous ewes), for older ewes and for twin-bearing ewes compared with ewes with single lambs. MBS was under genetic control ( h2 = 0·13, permanent environmental effect = 0·19, when analysed as the same trait across parities) and the repeatability was 0·32.MBS had no significant effects on weight gain of lambs. However, a moderate, positive genetic correlation was estimated between MBS and the average weight gained by lambs from birth to marking ( rg = 0·4, s.e. 0·22), although the genetic correlation estimated between MBS and weight gained to weaning was close to zero ( rg = 0·02, s.e. 0·16). Ewes with a MBS of 1 (ewe flees and does not return to her lambs) had significantly more lambs dying before marking and weaning than ewes with a higher maternal behaviour score. Selection to reduce the proportion of ewes in this category may therefore be beneficial.
A multilayer substrate integrated filter using dual dielectric modes
Authors: Yuan Xiao-Xiao , Zhou Li-Heng , Chen Jian-Xin 
Published: May 2019

AbstractIn this paper, a novel multilayer substrate integrated dual-mode dielectric resonator (DR) filter is proposed. The square dual-mode DR is made of the high permittivity substrate by removing the undesired portions and the surface coppers so that the relatively high unloaded quality factor of the dominate TM11 pair can be obtained which compared to these fully dielectric-filled substrate integrated waveguides. Meanwhile, it can be easily integrated in an equivalent cavity implemented by multilayer printed circuit boards for filter design, showcasing low in-band loss, light weight, and compact size. For demonstration, a multilayer substrate integrated DR bandpass filter centered at X-band is designed and measured. Good agreement between the simulated and measured results can be observed, and the measured insertion loss at the passband center frequency (8.38 GHz) is 1.1 dB.
Fault Initiation in Serpentinite
Authors: Melosh Benjamin L. 
Published: May 2019

AbstractSerpentinite fault rheology is fundamental to tectonic and earthquake processes, yet links between deformation textures and strength evolution during fault initiation are poorly constrained. Here I present field and petrographic microstructural observations of unsheared and sheared serpentinite that demonstrate a progression of fault development. I compliment observations with a clast‐size distribution analysis to investigate the evolution of fault rigidity and a numerical model to query the stress distribution of a clast‐in‐matrix geometry. Unsheared microstructures reveal well‐aligned, elongate serpentine in the matrix and short, randomly oriented serpentine in clasts. Sheared matrix displays cataclastic textures, discrete brittle surfaces, dissolution bands, and ductile textures defined by anastomosing networks of well‐aligned, fine‐grained serpentine. During fault initiation, matrix serpentine anisotropy promotes slip on basal planes or fiber aggregates, and clast‐on‐clast interactions drive a high bulk viscosity prone to stick‐slip behavior. As deformation progresses, clast fracturing is focused at clast tips, and smaller clasts are preferentially removed by dissolution‐precipitation processes, increasing the relative abundance of matrix and promoting fault creep. Strain is continually focused in the matrix and as clast content reduces the bulk viscosity drops. This study reveals that viscosity contrasts formed by primary serpentinization textures are a major driver for the development and strength evolution of faults. On a continental‐scale, similar processes may govern earthquake distributions, fault growth, and segmentation patterns on young, serpentinite‐hosted faults.
Impulsive Source of the 2017 MW=7.3 Ezgeleh, Iran, Earthquake
Authors: Gombert B. , Duputel Z. , Shabani E. , Rivera L. , Jolivet R. , Hollingsworth J. 
Published: May 2019

AbstractOn 12 November 2017, a MW=7.3 earthquake struck near the Iranian town of Ezgeleh, at the Iran‐Iraq border. This event was located within the Zagros fold and thrust belt which delimits the continental collision between the Arabian and Eurasian Plates. Despite a high seismic risk, the seismogenic behavior of the complex network of active faults is not well documented in this area due to the long recurrence interval of large earthquakes. In this study, we jointly invert interferometric synthetic aperture radar and near‐field strong motions to infer a kinematic slip model of the rupture. The incorporation of these near‐field observations enables a fine resolution of the kinematic rupture process. It reveals an impulsive seismic source with a strong southward rupture directivity, consistent with significant damage south of the epicenter. We also show that the slip direction does not match plate convergence, implying that some of the accumulated strain must be partitioned onto other faults.
Viscoelastic Modeling of Nocturnal Thermal Fracturing in a Himalayan Debris‐Covered Glacier
Authors: Podolskiy Evgeny A. , Fujita Koji , Sunako Sojiro , Sato Yota 
Published: May 2019

Recent observations suggest that the nocturnal thermal fracturing of ice occurs at relatively warm temperatures (above −15 °C) at a high‐altitude Himalayan glacier system unless the ice is shielded by a debris mantle. Here we estimate the stresses induced by diurnal temperature variations using viscous, elastic, and two viscoelastic models, and various thicknesses of the debris mantle. Only the elastic and visco‐elastic models are in agreement with the observations. The timing and amplitudes of the stresses in the upper 15 cm of the glacier are different among the models despite the ability of each approach to predict a diurnal increase in tension exceeding the critical threshold proposed for crevasse formation. For example, the elastic stress is several times larger than the viscous stress at the ice surface (650 vs. 250 kPa) and reaches its peak up to 5–6 hr later in the night. The time lag is in line with the seismic records, suggesting that the viscous model is not appropriate. Furthermore, a debris layer of ≥50 cm in thickness suppresses the diurnal fluctuations in thermal stress and therefore protects the ice from mechanical damage. We suggest that high‐amplitude diurnal cooling and weak ice properties due to weathering are essential factors that influence thermal fracturing in the Himalayan environment. The ongoing expansion of seismic networks into cryospheric regions, which will be capable of detecting local thermal‐contraction‐induced cracks, in combination with the fact that such cracks can erode and weaken the ice, and thereby serve as meltwater and heat channels, warrants further research to better understand these near‐surface processes and to monitor ice properties.
Nitrogen Cycle Patterns During Forest Regrowth in an African Miombo woodland Landscape
Authors: Mayes Marc , Melillo Jerry , Neill Christopher , Palm Cheryl , Mustard Jack , Nyadzi Gerson 
Published: May 2019

AbstractTropical dry forests in eastern and southern Africa cover 2.5 × 106 km2, support wildlife habitat and livelihoods of more than 150 million people, and face threats from land use and climate change. To inform conservation, we need better understanding of ecosystem processes like nutrient cycling that regulate forest productivity and biomass accumulation. Here we report on patterns in nitrogen (N) cycling across a 100‐year forest regrowth chronosequence in the Tanzanian Miombo woodlands. Soil and vegetation indicators showed that low ecosystem N availability for trees persisted across young to mature forests. Ammonium dominated soil mineral N pools from 0‐ to 15‐cm depth. Laboratory‐measured soil N mineralization rates across 3‐ to 40‐year regrowth sites showed no significant trends and were lower than mature forest rates. Aboveground tree N pools increased at 6 to 7 kg N·ha−1·yr−1, accounting for the majority of ecosystem N accumulation. Foliar δ15N <0‰ in an N‐fixing canopy tree across all sites suggested that N fixation may contribute to ecosystem N cycle recovery. These results contrast N cycling in wetter tropical and Neotropical dry forests, where indicators of N scarcity diminish after several decades of regrowth. Our findings suggest that minimizing woody biomass removal, litter layer, and topsoil disturbance may be important to promote N cycle recovery and natural regeneration in Miombo woodlands. Higher rates of N mineralization in the wet season indicated a potential that climate change‐altered rainfall leading to extended dry periods may lower N availability through soil moisture‐dependent N mineralization pathways, particularly for mature forests.
Pattern Extraction of Topsoil and Subsoil Heterogeneity and Soil‐Crop Interaction Using Unsupervised Bayesian Machine Learning: An Application to Satellite‐Derived NDVI Time Series and Electromagnetic Induction Measurements
Authors: Wang Hui , Wellmann Florian , Zhang Tianqi , Schaaf Alexander , Kanig Robin Maximilian , Verweij Elizabeth , von Hebel Christian , van der Kruk Jan 
Published: May 2019

AbstractThe link between remotely sensed surface vegetation performances with the heterogeneity of subsurface physical properties is investigated by means of a Bayesian unsupervised learning approach. This question has considerable relevance and practical implications for precision agriculture as visible spatial differences in crop development and yield are often directly related to horizontal and vertical variations in soil texture caused by, for example, complex deposition/erosion processes. In addition, active and relict geomorphological settings, such as floodplains and buried paleochannels, can cast significant complexity into surface hydrology and crop modeling. This also requires a better approach to detect, quantify, and analyze topsoil and subsoil heterogeneity and soil‐crop interaction. In this work, we introduce a novel unsupervised Bayesian pattern recognition framework to address the extraction of these complex patterns. The proposed approach is first validated using two synthetic data sets and then applied to real‐world data sets of three test fields, which consists of satellite‐derived normalized difference vegetation index (NDVI) time series and proximal soil measurement data acquired by a multireceiver electromagnetic induction geophysical system. We show, for the first time, how the similarity and joint spatial patterns between crop NDVI time series and soil electromagnetic induction information can be extracted in a statistically rigorous means, and the associated heterogeneity and correlation can be analyzed in a quantitative manner. Some preliminary results from this study improve our understanding the link of above surface crop performance with the heterogeneous subsurface. Additional investigations have been planned for further testing the validity and generalization of these findings.
Longitudinal Gradients in Tree Stem Greenhouse Gas Concentrations Across Six Pacific Northwest Coastal Forests
Authors: Ward N.D. , Indivero J. , Gunn C. , Wang W. , Bailey V. , McDowell N.G. 
Published: May 2019

AbstractThe aim of this study was to examine the magnitude of greenhouse gas (GHG) concentrations in tree stems of Pacific Northwest, USA coastal forests and evaluate various tree and site characteristics along river‐to‐sea gradients as possible drivers of tree stem GHG variation. We measured the concentration of CH4, CO2, and N2O during summer and winter in live and dead tree stems of five species from six coastal watersheds and related this to soil porewater GHG concentrations, porewater salinity, and tree characteristics. Overall, average pCO2 and pCH4 were elevated above atmospheric concentration, and average pN2O was slightly below atmospheric concentration. Stem pCO2 was higher in the summer than the winter and was higher in angiosperm trees compared to gymnosperm trees, whereas pCH4 was significantly higher in fresh upstream compared to salt‐influenced reaches. Stem pCH4 was also positively correlated with porewater pCH4 in contrast to other GHGs. The above results suggest that tree stem pCH4 in these coastal settings was primarily controlled by soil linkages, pCO2 was primarily regulated by tree physiology, and factors controlling pN2O remain unclear.
The impact of human health co-benefits on evaluations of global climate policy
Authors: Scovronick Noah , Budolfson Mark , Dennig Francis , Errickson Frank , Fleurbaey Marc , Peng Wei , Socolow Robert H. , Spears Dean , Wagner Fabian 
Published: May 2019

AbstractThe health co-benefits of CO2 mitigation can provide a strong incentive for climate policy through reductions in air pollutant emissions that occur when targeting shared sources. However, reducing air pollutant emissions may also have an important co-harm, as the aerosols they form produce net cooling overall. Nevertheless, aerosol impacts have not been fully incorporated into cost-benefit modeling that estimates how much the world should optimally mitigate. Here we find that when both co-benefits and co-harms are taken fully into account, optimal climate policy results in immediate net benefits globally, overturning previous findings from cost-benefit models that omit these effects. The global health benefits from climate policy could reach trillions of dollars annually, but will importantly depend on the air quality policies that nations adopt independently of climate change. Depending on how society values better health, economically optimal levels of mitigation may be consistent with a target of 2 °C or lower.
Twisted magnon beams carrying orbital angular momentum
Authors: Jia Chenglong , Ma Decheng , Schäffer Alexander F. , Berakdar Jamal 
Published: May 2019

AbstractLow-energy eigenmode excitations of ferromagnets are spin waves or magnons that can be triggered and guided in magnonic circuits without Ohmic losses and hence are attractive for communicating and processing information. Here we present new types of spin waves that carry a definite and electrically controllable orbital angular momentum (OAM) constituting twisted magnon beams. We show how twisted beams emerge in magnonic waveguides and how to topologically quantify and steer them. A key finding is that the topological charge associated with OAM of a particular beam is tunable externally and protected against magnetic damping. Coupling to an applied electric field via the Aharanov-Casher effect allows for varying the topological charge. This renders possible OAM-based robust, low-energy consuming multiplex magnonic computing, analogously to using photonic OAM in optical communications, and high OAM-based entanglement studies, but here at shorter wavelengths, lower energy consumption, and ready integration in magnonic circuits.
Resonance-enhanced three-photon luminesce via lead halide perovskite metasurfaces for optical encoding
Authors: Fan Yubin , Wang Yuhan , Zhang Nan , Sun Wenzhao , Gao Yisheng , Qiu Cheng-Wei , Song Qinghai , Xiao Shumin 
Published: May 2019

AbstractLead halide perovskites have emerged as promising materials for photovoltaic and optoelectronic devices. However, their exceptional nonlinear properties have not been fully exploited in nanophotonics yet. Herein we fabricate methyl ammonium lead tri-bromide perovskite metasurfaces and explore their internal nonlinear processes. While both of third-order harmonic generation and three-photon luminescence are generated, the latter one is less affected by the material loss and has been significantly enhanced by a factor of 60. The corresponding simulation reveals that the improvement is caused by the resonant enhancement of incident laser. Interestingly, such kind of resonance-enhanced three-photon luminescence holds true for metasurfaces with a small period number of 4, enabling promising applications of perovskite metasurface in high-resolution nonlinear color nanoprinting and optical encoding. The encoded information ‘NANO’ is visible only when the incident laser is on-resonance. The off-resonance pumping and the single-photon excitation just produce a uniform dark or photoluminescence background.
High-throughput screening of the Plasmodium falciparum cGMP-dependent protein kinase identified a thiazole scaffold which kills erythrocytic and sexual stage parasites
Authors: Penzo Maria , de las Heras-Dueña Laura , Mata-Cantero Lydia , Diaz-Hernandez Beatriz , Vazquez-Muñiz Maria-Jesus , Ghidelli-Disse Sonja , Drewes Gerard , Fernandez-Alvaro Elena , Baker David A. 
Published: May 2019

AbstractAntimalarial drug resistance compels the quest for new compounds that target alternative pathways to current drugs. The Plasmodium cyclic GMP-dependent protein kinase (PKG) has essential functions in all of the major life cycle developmental stages. An imidazopyridine PKG inhibitor scaffold was previously shown to clear P. falciparum infection in a rodent model in vivo and blocked transmission to mosquitoes providing proof of concept for this target. To find new classes of PKG inhibitors to serve as alternative chemical starting points, we performed a high-throughput screen of the GSK Full Diversity Collection using recombinant P. falciparum PKG. We developed a robust enzymatic assay in a 1536-well plate format. Promising compounds were then tested for activity against P. falciparum asexual blood stage growth, selectivity and cytotoxicity. By using a scoring system we selected the 66 most promising PKG inhibitors (comprising nine clusters and seven singletons). Among these, thiazoles were the most potent scaffold with mid-nanomolar activity on P. falciparum blood stage and gamete development. Using Kinobeads profiling we identified additional P. falciparum protein kinases targeted by the thiazoles that mediate a faster speed of the kill than PKG-selective compounds. This scaffold represents a promising starting point to develop a new antimalarial.
Changes in Pectoral Muscle Volume During Subacute Period after Radiation Therapy for Breast Cancer: A Retrospective up to 4-year Follow-up Study
Authors: Seo Anna , Hwang Jong-Moon , Lee Jong-Min , Jung Tae-Du 
Published: May 2019

AbstractRadiotherapy (RT) is an effective treatment for managing breast cancer patients with breast conserving surgery, but patients may experience radiation-induced shoulder problems. Even though the course of shoulder morbidity is unknown, pectoral muscle changes after radiotherapy can be a major cause of shoulder problems. Twenty-two patients treated with RT for unilateral breast cancer were included in the study. All patients underwent serial computed tomography (CT) imaging before and immediately after RT, as well as 2 months, 6 months, 2 years, and 3–4 years after RT. These CT scans were used to compare muscle volume changes. The pectoral muscle volume and muscle volume surrounding the scapular measurement was performed using 3D modelling after segmentation of the CT scans. In all patients, the pectoral muscle volume increased during the 2 months after RT, and there was continuous volume reduction from 2–48 months after RT. Changes in muscle volume ratio over time were analysed by repeated measure ANOVA and it was found that there was a significant change in the pectoral muscle volume (p < 0.001) from Just before RT and Immediately after RT at 2 month after RT. On the other hand, the changes in the muscle volume of the surrounding scapular were not significant.
Phylogenetics and species delimitations of the operculated land snail Cyclophorus volvulus (Gastropoda: Cyclophoridae) reveal cryptic diversity and new species in Thailand
Authors: Nantarat Nattawadee , Sutcharit Chirasak , Tongkerd Piyoros , Wade Christopher M. , Naggs Fred , Panha Somsak 
Published: May 2019

AbstractRecent conceptual and practical advances in phylogenetic species delimitation have enabled progressively robust biodiversity studies. Delimiting species in widespread taxa is an intriguing problem; the edible operculated land snailCyclophorus volvulus(Müller, 1774) is a good example since it shows a high degree of shell and color variation along with a widespread distribution throughout Thailand. Taxonomic boundaries forC.volvuluswere examined and clarified using a combined morphological and phylogenetic approach, the latter of which was based on both nuclear and mitochondrial gene sequences. Moreover, three species delimitation analyses were applied: Poisson tree processes (PTP), automatic barcode gap discovery (ABGD), and generalized mixed Yule-coalescent (GMYC). All phylogenetic trees revealed thatC.volvuluswas polyphyletic and comprised of three clades that coincided with their geographic distribution. The three species delimitation analyses concurred with the phylogenies and formed at least three groups. According to the results,C.volvuluss.l., as currently recognized, consists of three distinct species in Thailand:C.volvuluss.s.,C.occultussp. nov., andC.borealissp. nov., which are described herein. Moreover, several of these highly distinctC.volvulusevolutionarily significant units (ESU) are likely to require urgent conservation attention.