bluuebunny/crossref_metadata_2025_split huggingface dataset:
Performance Indicators Considered for Selection of Agency in Maritime Industry
Authors: Kose Süleyman , Ozkok Murat , Demirel Faruk Bugra , Kose Ercan 
Published: August 2018

Abstract
A shipping agency or shipping agent is the designated person or agency held responsible for handling shipments and cargo, and the general interests of its customers, at ports and harbors worldwide, on behalf of ship owners, managers, and charterers. Shipping agents will usually take care of all the regular routine tasks of a shipping company quickly and efficiently. They ensure that essential supplies, crew transfers, customs documentation, and waste declarations are all arranged with the port authorities without delay and often provide the shipping company with updates and reports on activities at the destination port so that shipping companies have real-time information while goods are in transit. Due to these reasons, selection of the ship agencies becomes an indispensable part of maritime transportation. Managing a ship agency requires interconnected and labor-intensive processes for any kind of shipping operations, which results in a complicated mission. This study presents the most important ship agency selection criteria, according to the determined criteria in the literature, by employing fuzzy AHP technique, one of the most common fuzzy multiple criteria decision-making (MCDM) methods.
Awareness, knowledge, attitude and practices regarding human papilloma virus among female students at the University of Namibia
Authors: Amukugo Hans Justus , Rungayi Blessing Rufaro , Karera Abel 
Published: August 2018

Purpose: The high prevalence of human papilloma virus (HPV) infection and its association with cervical cancer (as one of the leading causes of death in Namibia) makes it important to determine the level of understanding as well as beliefs of the public regarding HPV, especially that of young university female students. The purpose of the study was to determine awareness, knowledge, attitude and practices regarding HPV, among female students at the University of Namibia.Methods: A quantitative cross sectional research design was adopted using a convenient sample of 126 female students from the 534 females at the health sciences faculty, University of Namibia, Main Campus. Data was collected using a modified, adopted self-administered questionnaire and analysed using Microsoft Excel 2013.Results: The majority of participants were below 25 years (79.1%), single (91.7%) and nursing students (93.3%). HPV awareness was generally high with the majority aware of HPV infection (71%), cervical cancer (94.2%), genital warts (90%) and HPV vaccine (54.2%). Only 40% knew that HPV could be transmitted through skin to skin contact and only 9.2% knew that HPV was not associated with herpes. Attitude towards HPV was positive, 55% believed they were at risk of HPV and 82% were willing to receive the HPV vaccine. Practices regarding HPV were poor, 68% were sexually active, 40% reported using condoms sometimes, 7% never used condoms at all and 75% had never had a Pap smear test done.Conclusions: Level of awareness and knowledge of HPV, its related diseases and vaccines was moderate to high, attitude was generally positive whilst practice was poor among female students at the health sciences faculty, University of Namibia. Students need to be encouraged to engage in safe sexual practice to prevent and reduce risk of HPV infection.
Evaluation of the Push-out Bond Strength of ProRoot MTA and Bio-dentine After Removal of Calcium Hydroxide and Triple Antibiotic Paste
Authors: Tulumbacı Fatih , Erkmen Almaz Merve , Arıkan Volkan , Mutluay Merve Safa 
Published: August 2018

Aim: To evaluate the effect of calcium hydroxide (CH) and triple antibiotic paste (TAP), on the push-out bond strength of ProRoot MTA and Biodentine.
Methodology: Root canals of 120 human teeth were instrumented using rotary files. To obtain a standard diameter of 1.5 mm,the roots were instrumented to a #6 Peeso reamer. The reamers were passed 1 mm beyond apex to simulate open apices. The roots were randomly assigned into following groups: Group 1: CH; Group 2: TAP; Group 3: no medicament (control). The medicaments were removed after 3 weeks. Thereafter, the specimens were divided into two subgroups according to the calcium silicate-based cement applied (n = 20): (i) ProRoot MTA (Dentsply Tulsa Dental, USA) and (ii) Biodentine (Septodont, France). Push-out test was performed, and the data were analysed statistically using one-way ANOVA and Tukey’s post hoc test.
Results: In both MTA and Biodentine groups, pairwise comparisons between medicaments showed similar values to the control group (P > 0.05). Overall, there was a predominance of cohesive failures between root dentin and cements.
Conclusion: Biodentine and ProRoot MTA showed similar bond strength values, and prior application of the TAP and CH did not affect the bond strength significantly.
The approaches of Turkish dentists to the invasive treatment
Authors: Hatipoğlu Ömer , Temur Katibe Tuğçe 
Published: August 2018

Aim: To research the effect of gender, workplace, and experience on the invasive treatment approaches of dentists in Turkey.
Methodology:
In May 2018, 320 dentists working in Turkey participated in a survey. In the questionnaire, dentists were asked about their demographic characteristics such as gender, experience, and workplace. In addition, the invasive treatment initiation stages and the dental materials and techniques that they preferred for patients with low and high risk of caries were queried. The data obtained were analyzed using Pearson's χ2 test.
Results:
Gender was significantly related to the choice of invasive treatment approach for patients who have high (p=0.024) or low risk of caries (p=0.032). The experience factor was not significantly related to the choice of invasive treatment approach (p>0.05), but the workplace factor was significantly related for those with a low risk of caries (p=0.037). The selection of dental material was significantly related to the workplace factor (p<0.001), but not related to gender (p=0.359) or experience (p=0.067). The selection of the restorative technique was significantly related to experience (p=0.033), but not related to the factors of gender (p=0.132) or workplace (p=0.082).
Conclusion: To further increase minimally invasive approaches to dental treatment, authorities need to improve their health policies to reduce dentists’ workload.
Assessment of oral hygiene behaviors and periodontal status among dental patients, in Turkey: A pilot study.
Authors: Coşkun Eylem , Ünlü Füsun Kıymet 
Published: August 2018

Aim:Mechanical plaque control plays a substantial role in preventing periodontal diseases. The aim of this study was to determine the self-reported oral hygiene habits and periodontal status of dental patients in Turkey and to evaluate whether the data was consistent with the current periodontal status of the participants.
Methodology: The study group consisted of 104 patients in consultation with a faculty of dentistry in Turkey. Clinical measurements included probing depth (PD), clinical attachment level (CAL), plaque index and bleeding on probing. A survey was conducted in order to learn participants’ oral hygiene habits and demographic data. Three groups of 0–3 mm, 4–6 mm, and ≥ 7 mm were assigned to all patients for PD and CAL values.
Results: A total of 33.6% of the participants brushed their teeth two or more times per day, and 33.7% brushed one time daily. The percentage of dental floss use was 11.5% and interproximal brushing was 7.7%. The percentage of the areas with 0–3 mm PD were 89.78%, and areas with 0–3 mm CAL were 86.61%. Areas with ≥ 7 mm PD and CAL were found to be very low (PD: 3.85%, CAL: 3.60%). The extent of dental plaque was 62.80% and bleeding on probing was 38.13% of the overall study population.
Conclusion: It is possible to say that oral care is insufficient in our study group. Also, poor oral hygiene and smoking are closely related to moderate and severe clinical attachment loss for the participants. Consequently, it is clear that more extensive researches need to be done across the country.
Testing the FAIR metrics on data catalogs
Authors: van Erp Jarno A A , Langen Carolyn D , Boon Anca , van Bochove Kees 
Published: August 2018

The introduction of the FAIR –Findable, Accessible, Interoperable, Reusable– principles has caused quite an uproar within the scientific community. Principles which, if everyone adheres to them, could result in new, revolutionary ways of performing research and fulfill the promise of open science. Furthermore, it allows for concepts such as personalized medicine and personal health monitoring to -finally- become implemented in daily practice.
However, to bring about these changes, data users need to rethink the way they treat scientific data. Just passing a dataset along, without extensive metadata will not suffice anymore. Such new ways of executing research require a significantly different approach from the entire scientific community or, for that matter, anyone who wants to reap the benefits from going FAIR.
Yet, how do you initiate behavioral change? One important solution is by changing the software scientists use and requiring data owners, or data stewards, to FAIRify their dataset. Data catalogs are a great starting point for FAIRifying data as the software already intends to make data Findable and Accessible, while the metadata is Interoperable and relying on users to provide sufficient metadata to ensure Reusability. In this paper we analyse how well the FAIR principles are implemented in several data catalogs.
To determine how FAIR a catalog is, the FAIR metrics were created by the GO-FAIR initiative. These metrics help determine to what extend data can be considered FAIR. However, the metrics were only recently developed, being first released at the end of 2017. At the moment software does not come standard with a FAIR metrics review. Still, this insight is highly desired by the scientific community. How else can they be sure that (public) money is spend in a FAIR way?
The Hyve has tested/evaluated three popular open source data catalogs based on the FAIR metrics: CKAN, Dataverse, and Invenio. Most data stewards will be familiar with at least one of these.
Within this white paper we provide answers to the following questions:
Which of the three data catalogs performs best in making data FAIR?
Which data catalog utilizes FAIR datasets the most?
Which one creates the most FAIR metadata?
Which catalog has the highest potential to increase its FAIRness, and how?
Which data catalog facilitates the FAIRifying process the best?
Proteomics (SWATH-MS) informed by transcriptomics approach of tropical herbPersicaria minorleaves upon methyl jasmonate elicitation
Authors: Aizat Wan Mohd , Ibrahim Sarah , Rahnamaie-Tajadod Reyhaneh , Loke Kok-Keong , Goh Hoe-Han , Noor Normah Mohd 
Published: August 2018

BackgroundJasmonic acid (JA) and its derivative, methyl JA (MeJA) are hormonal cues released by plants that signal defense response to curb damages from biotic and abiotic stresses. To study such response, a tropical herbal plant,Persicaria minor, which possesses pungent smell and various bioactivities including antimicrobial and anticancer, was treated with MeJA. Such elicitation has been performed in hairy root cultures and plants such as Arabidopsis and rice, yet how MeJA influenced the proteome of an herbal species likeP. minoris unknown.MethodIn this study,P. minorplants were exogenously elicited with MeJA and leaf samples were subjected to SWATH-MS proteomics analysis. A previously published translated transcriptome database was used as a reference proteome database for a comprehensive protein sequence catalogue and to compare their differential expression.ResultsFrom this proteomics informed by transcriptomics approach, we have successfully profiled 751 proteins of which 40 proteins were significantly different between control and MeJA-treated samples. Furthermore, a correlation analysis between both proteome and the transcriptome data sets suggests that significantly upregulated proteins were positively correlated with their cognate transcripts (Pearson’sr = 0.677) while a weak correlation was observed for downregulated proteins (r = 0.147).DiscussionMeJA treatment induced the upregulation of proteins involved in various biochemical pathways including stress response mechanism, lipid metabolism, secondary metabolite production, DNA degradation and cell wall degradation. Conversely, proteins involved in energy expensive reactions such as photosynthesis, protein synthesis and structure were significantly downregulated upon MeJA elicitation. Overall protein-transcript correlation was also weak (r = 0.341) suggesting the existence of post-transcriptional regulation during such stress. In conclusion, proteomics analysis using SWATH-MS analysis supplemented by the transcriptome database allows comprehensive protein profiling of this non-model herbal species upon MeJA treatment.
Differences between motor execution and motor imagery of grasping movements in the motor cortical excitatory circuit
Authors: Meng Hai-Jiang , Pi Yan-Ling , Liu Ke , Cao Na , Wang Yan-Qiu , Wu Yin , Zhang Jian 
Published: August 2018

Background
Both motor imagery (MI) and motor execution (ME) can facilitate motor cortical excitability. Although cortical excitability is modulated by intracortical inhibitory and excitatory circuits in the human primary motor cortex, it is not clear which intracortical circuits determine the differences in corticospinal excitability between ME and MI.

Methods
We recruited 10 young healthy subjects aged 18−28 years (mean age: 22.1 ± 3.14 years; five women and five men) for this study. The experiment consisted of two sets of tasks involving grasp actions of the right hand: imagining and executing them. Corticospinal excitability and short-interval intracortical inhibition (SICI) were measured before the interventional protocol using transcranial magnetic stimulation (baseline), as well as at 0, 20, and 40 min (T0, T20, and T40) thereafter.

Results
Facilitation of corticospinal excitability was significantly greater after ME than after MI in the right abductor pollicis brevis (APB) at T0 and T20 (p < 0.01 for T0, and p < 0.05 for T20), but not in the first dorsal interosseous (FDI) muscle. On the other hand, no significant differences in SICI between ME and MI were found in the APB and FDI muscles. The facilitation of corticospinal excitability at T20 after MI correlated with the Movement Imagery Questionnaire (MIQ) scores for kinesthetic items (Rho = −0.646, p = 0.044) but did not correlate with the MIQ scores for visual items (Rho = −0.265, p = 0.458).

Discussion
The present results revealed significant differences between ME and MI on intracortical excitatory circuits of the human motor cortex, suggesting that cortical excitability differences between ME and MI may be attributed to the activation differences of the excitatory circuits in the primary motor cortex.
МЕХАНИЗМ ОБРАЗОВАНИЯ, ВОЗРАСТ И ЭВОЛЮЦИЯ ОЗЕРНЫХ КОТЛОВИН ЦЕНТРАЛЬНОЙ ЧАСТИ ПСКОВСКОЙ НИЗМЕННОСТИ, "Геоморфология"
Authors: Карпухина Н.В. , Константинов Е.А. , Курбанов Р.Н. , ДЕРКАЧ А.А. , МАТЛАХОВА Е.Ю. 
Published: August 2018

Озера центральной части Псковской низменности (Белая Струга, Большое, Черное) рас- положены к северу и к югу от фронтальной зоны краевых образований лужской стадии поздневалдайского оледенения и приурочены к разным генетическим типам рельефа. Анализ литологического строения колонок озерных отложений и пространственного положения озер в рельефе позволил восстановить механизм образования их котловин и выделить основные этапы эволюции озер в позднеледниковье и голоцене. Формирование котловин в пределах лимногляциальных равнин связано с неравномерной ледниковой аккумуляцией в условиях таяния мертвого льда и деятельности приледниковых водоемов. В пределах района исследования обособление таких озер произошло в период с 14.4 по 13.8 тыс. кал. л.н. Образование котловин в пределах зандровых равнин обусловлено просадочно-гляциокарстовым механизмом. Озерный этап осадконакопления в котловинах этого типа озер сопоставляется с началом аллерёда (в озере Черное не позднее 13140±250 кал. л.н.). На основании данных радиоуглеродного датирования озерных отложений удалось выявить в осадках границу позднего плейстоцена и голоцена, оценить возраст озерных отложений на разных глубинах и темпы осадконакопления. Результаты определения потерь при прокаливании озерных отложений 550 и 1000 °C свидетельствуют о том, что минерагенный тип седиментации преобладал в позднеледниковье во всех водоемах, в голоцене в оз. Белая Струга, органогенный - в оз. Большое и оз. Черное. Максимальные скорости седиментации в озерах зафиксированы в атлантический период голоцена. Исходя из средних темпов седиментации за последние 5-7 тыс. лет (0.2 до 0.3 мм/год) выполнены приблизительные оценки предельного времени существования озерных водоемов (до заболачивания): оз. Черное - 5500 лет, оз. Белая Струга - 10800 лет, оз. Большое - 3500 лет.
СТРАТИГРАФИЯ ДОННЫХ ОСАДКОВ МАЛЫХ ОЗЕР И ПАЛЕОГЕОГРАФИЯ ЗАПАДНОГО БЕРЕГА ОНЕЖСКОГО ЗАЛИВА БЕЛОГО МОРЯ В ПОЗДНЕЛЕДНИКОВЬЕ И ГОЛОЦЕНЕ, "Геоморфология"
Authors: Колька В.В. , Корсакова О.П. , Лаврова Н.Б. , Шелехова Т.С. , Толстоброва А.Н. , Толстобров Д.С. , Зарецкая Н.Е. 
Published: August 2018

Представлены новые данные по литологии, микропалеонтологии и геохронологии донных осадков малых озер, расположенных на западном берегу Онежского залива Белого моря. На основе полученных данных для указанного района реконструирована палеогеографическая обстановка позднеледниковья и голоцена. Установлено, что здесь в позднем дриасе в условиях краевой зоны деградирующего ледника образовывались приледниковые озера. Их осадки в виде палеонтологически немых разнозернистых песков с гравием отмечены в некоторых котловинах побережья до высоты около 140 м над у.м. Спуск этих озер в конце позднего дриаса способствовал формированию единого обширного пресноводного водоема в котловине современного Онежского залива. В начале пребореала при таянии погребенного льда на прилегающей суше происходило заболачивание локальных депрессий и образование низинных болот и торфяников. В конце пребореала - начале бореала при замедлении гляциоизостатического поднятия земной коры, после разрушения ледяной преграды в районе Соловецких островов и притока морской воды в котловину Онежского залива произошло затопление прилегающей к нему территории. Сначала в этом обширном водоеме, а позже в отделившихся от него малых озерах накапливались слоистые алевриты и алевритистые сапропели, перекрывающие торф в разрезах донных отложений. Котловины малых озер отчленялись от основного водоема Онежского залива в разное время на протяжении голоцена по причине гляциоизостатического поднятия и восходящих блоковых движений земной коры.
ДВИНСКИЙ ЗАЛИВ БЕЛОГО МОРЯ В ПОЗДНЕЛЕДНИКОВЬЕ?- РАННЕМ ГОЛОЦЕНЕ, "Геоморфология"
Authors: РЕПКИНА Т.Ю. , Зарецкая Н.Е. , ШИЛОВА О. С. 
Published: August 2018

На основе новых оригинальных данных о строении рельефа и отложений побережья Зимнего берега Белого моря от м. Керецкий до р. Куя, полученных методами геоморфологического профилирования, литостратиграфических описаний, радиоуглеродного датирования и диатомового анализа, а также анализа опубликованных геолого-геоморфологических материалов, восстановлены детали истории развития рельефа дна и побережья Двинского залива в поздне- ледниковье и раннем голоцене. Дана оценка хода изменений относительного уровня моря и скорости относительных вертикальных движений побережья. Установлено, что на северо-восточном берегу Двинского залива террасы высотой 5-20 м сформировались в ходе позднеледниковой трансгрессии - ранее, чем 9030±80-8410±40 14С (~10.2-9.4 тыс.) кал.л.н. Амплитуда трансгрессии, по ориентировочным оценкам, не превышала 15-16 м относительно современного уровня моря. Северо-восточное побережье залива (Зимний берег) испытывало относительное поднятие со скоростью около 0.2-0.5 мм/год, меньшее, чем Летний берег, что не может быть объяснено исключительно гляциоизостазией. Дельта р. Северной Двины была относительно стабильна. В конце пребореала - начале бореала на берегах залива фиксируется регрессия, протекавшая на фоне резкого увеличения притока в акваторию баренцевоморских вод.
МОРФОДИНАМИКА РУСЕЛ БОЛЬШИХ РЕК СЕВЕРА ЕТР И ПРОГНОЗНЫЕ ОЦЕНКИ ЕЕ ИЗМЕНЕНИЙ, "Геоморфология"
Authors: Львовская Е.А. , Чалов Р.С. 
Published: August 2018

Дана оценка переформирований русел рек Северной Двины, Вычегды, Мезени и Печоры в их нижнем течении в прошлом, настоящем и будущем вследствие саморазвития русловых форм, периодических многолетних колебаний водности и возможных изменений при различных сценариях изменений водности рек в XXI в. (повышение/понижение). Русла рек Севера слабоустойчивые и преимущественно разветвленные, причем преобладают наиболее сложные их морфодинамические типы (параллельно-рукавные, пойменно-русловые разветвления). Роль антропогенного фактора в целом незначительна, особенно на Печоре и Мезени: дноуглубление и выправление русел для обеспечения водного пути приводит к их стабилизации, сопровож­даемой упрощением морфологии. Полученные гидролого-морфологические зависимости для разветвлений позволили дать прогнозные оценки русловых переформирований при изменении водности рек в целом для их русел и основных рукавов в разветвлениях. При этом увеличение разветвленности русла может происходить как при увеличении водности рек благодаря активизации и развитию пойменных проток, так и при уменьшении водности рек вследствие активизации зарастания осередков и их превращения в острова. При повышении водности ожидается возникновение новых пойменно-русловых разветвлений и разветвленно-извилистого русла с последующим перераспределением расходов воды по основным рукавам. В одиночных, сопряженных, параллельно-рукавных и пойменно-русловых разветвлениях в многоводные годы основной поток сосредоточится в относительно более прямолинейных или расположенных вдоль коренного берега рукавах. На участках относительно прямолинейного неразветвленного русла ожидается спрямление динамической оси потока за счет формирования побочневых проток в тыловых частях побочней. Переформирования излучин Вычегды проявятся в активизации их продольного смещения за счет размыва вогнутых берегов в их нижних крыльях. Уменьшение стока выразится в сокращении водности вплоть до полного обмеления пойменных проток и одного из рукавов пойменно-русловых разветвлений, объединения небольших островов и их присоединения к пойменным массивам, сведет к минимуму число случаев спрямления излучин. На излучинах русла и в рукавах пойменно-русловых разветвлений Вычегды следует ожидать распространения фронта размыва вогнутых берегов на всю привершинную их часть, а также образования извилин динамической оси потока или даже вторичных излучин на их крыльях. То же произойдет на участках относительно прямолинейного русла Мезени и нижней Вычегды из-за зарастания побочней. Значительное изменение ширины произойдет в главных рукавах всех типов разветвлений, причем сокращение водности приведет к большему изменению ширины рукавов, чем ее увеличение. Наименьшее изменение ширины рукавов ожидается в параллельно-рукавных разветвлениях. При увеличении их водности произойдет примерно одинаковое увеличение ширины основных рукавов, при уменьшении - ­ширина судоходных рукавов сократится сильнее.