bluuebunny/crossref_metadata_2025_split huggingface dataset:
Controlled Incorporation of Nitrides into W‐Fe‐S Clusters
Authors: Xu Gan , Zhou Jie , Wang Zheng , Holm Richard H. , Chen Xu‐Dong 
Published: September 2019

AbstractIncorporation of monatomic 2p ligands into the core of iron–sulfur clusters has been researched since the discovery of interstitial carbide in the FeMo cofactor of Mo‐dependent nitrogenase, but has proven to be a synthetic challenge. Herein, two distinct synthetic pathways are rationalized to install nitride ligands into targeted positions of W‐Fe‐S clusters, generating unprecedented nitride‐ligated iron–sulfur clusters, namely [(Tp*)2W2Fe6(μ4‐N)2S6L4]2− (Tp*=tris(3,5‐dimethyl‐1‐pyrazolyl)hydroborate(1−), L=Cl− or Br−). 57Fe Mössbauer study discloses metal oxidation states of WIV2FeII4FeIII2 with localized electron distribution, which is analogous to the mid‐valent iron centres of FeMo cofactor at resting state. Good agreement of Mössbauer data with the empirical linear relationship for Fe–S clusters indicates similar ligand behaviour of nitride and sulfide in such clusters, providing useful reference for reduced nitrogen in a nitrogenase‐like environment.
Green synthesis and chemical characterization of copper nanoparticles using Allium saralicum leaves and assessment of their cytotoxicity, antioxidant, antimicrobial, and cutaneous wound healing properties
Authors: Tahvilian Reza , Zangeneh Mohammad Mahdi , Falahi Homeyra , Sadrjavadi Komail , Jalalvand Ali R. , Zangeneh Akram 
Published: September 2019

In recent decades, nanotechnology is growing rapidly owing to its widespread application in science and industry. The aim of the experiment was the green synthesis of copper nanoparticles using Allium saralicum R.M. Fritsch aqueous extract and assessment of their cytotoxicity, antioxidant, antibacterial, antifungal, and cutaneous wound healing effects under in vitro and in vivo conditions. These nanoparticles were characterized by Fourier transformed infrared spectroscopy (FT‐IR), UV–visible spectroscopy, field emission scanning electron microscopy (FE‐SEM), transmission electron microscopy (TEM), and atomic force microscopy (AFM). DPPH free radical scavenging test was done to assess the antioxidant properties, which indicated similar antioxidant potentials for CuNPs@Allium and butylated hydroxytoluene. Minimum Inhibitory Concentration (MIC), Minimum Bactericidal Concentration (MBC), and Minimum Fungicidal Concentration (MFC) were specified by macro‐broth dilution assay. CuNPs@Allium indicated higher antibacterial and antifungal effects than all standard antibiotics (p ≤ 0.01). Also, CuNPs@Allium inhibited the growth of all bacteria at 1–8 mg/ml concentrations and removed them at 2–8 mg/ml concentrations (p ≤ 0.01). In the case of antifungal properties of CuNPs@Allium, they prevented the growth of all fungi at 1–4 mg/ml concentrations and destroyed them at 2–8 mg/ml concentrations (p ≤ 0.01). In vivo experiment, after creating the cutaneous wound, the rats were randomly divided into six groups (n = 10): untreated control, treatment with Eucerin basal ointment, treatment with 3% tetracycline ointment, treatment with 0.2% CuSO4 ointment, treatment with 0.2% A. saralicum ointment, and treatment with 0.2% CuNPs@Allium ointment. Use of CuNPs@Allium ointment in the treatment groups substantially reduced (p ≤ 0.01) the wound area, total cells, neutrophil, macrophage, and lymphocyte and remarkably raised (p ≤ 0.01) the wound contracture, hydroxyl proline, hexosamine, hexuronic acid, fibrocyte, and fibrocytes/fibroblast rate compared to other groups. The synthesized CuNPs@Allium had high cell viability dose‐dependently (Investigating the effect of the plant on HUVEC cell line) and revealed this method was nontoxic. The results revealed the useful non‐cytotoxic, antioxidant, antibacterial, antifungal, and cutaneous wound healing effects of CuNPs@Allium.
Polyurethane fibrous membranes tailored by rotary jet spinning for tissue engineering applications
Authors: Pereira Rodrigues Isabella Caroline , Tamborlin Leticia , Rodrigues Ana Amélia , Jardini André Luiz , Ducati Luchessi Augusto , Maciel Filho Rubens , Najar Lopes Éder Sócrates , Pellizzer Gabriel Laís 
Published: September 2019

ABSTRACTPolymeric membranes have gained popularity as fibrous structures for tissue regeneration. This research focuses on the rotary jet spinning (RJS) process combined with a polymer as a strategy for designing membranes. To this end, RJS‐polyurethane (RJS‐PU) membranes with different microstructures were produced. Considering the effects of solution properties on fiber production, the viscosity of PU solutions was evaluated. Membrane morphology was studied based on scanning electron microscopy and 2D fast Fourier transform analysis. The chemical and thermal properties were characterized by Fourier‐transform infrared spectroscopy and thermogravimetric analysis, respectively. 3‐(4,5‐Dimethylthiazol‐2‐yl)‐2,5‐diphenyltetrazolium bromide and Live/Dead cell assays were performed to determine the material cytotoxicity by assessment of the profile of proliferation and cell viability. The results indicated that the combination of PU and RJS was an effective one for the production of fibrous structures for tissue engineering applications, demonstrating good compatibility with the cultured osteoblastic cell line. © 2019 Wiley Periodicals, Inc. J. Appl. Polym. Sci.2020,137, 48455.
Monitoring long‐term changes in UK grey seal pup production
Authors: Russell Debbie J. F. , Morris Chris D. , Duck Callan D. , Thompson Dave , Hiby Lex 
Published: September 2019

Abstract

The population size of many species, particularly those in the aquatic environment, cannot be censused directly. Counts, during the breeding season, of one component of the population (e.g. breeding females) are often used as an index to allow investigation of trends. In species, such as grey seals (Halichoerus grypus), for which births are not tightly synchronous, single counts of pups represent an unknown proportion of the total number of pups born (pup production), and thus of breeding females (i.e. each pup born represents a breeding female).
Grey seals pup at large colonies around the coast of the UK. Information on their populations is required under national and international legislation.
In the UK, pup production has been monitored at some colonies since 1956. Currently, large colonies (~90% of UK pup production) are monitored either using ground (~10%; annually) or aerial surveys (~80%; annually until 2010, and thereafter biennially).
Here, the model used to estimate pup production at aerially surveyed colonies from 1987 to 2010 is described; structured pup counts from multiple surveys are combined with knowledge of life‐history parameters to model birth curves.
The resulting trends in pup production up to 2010 (aerially surveyed colonies) and 2016 (ground surveyed colonies) are examined.
In 2010, over 45,000 pups were estimated to be born in the UK. Pup production appeared to have reached an asymptote in the Inner Hebrides, Outer Hebrides and Orkney, whereas it is still increasing exponentially in the North Sea. Although density‐dependent processes acting at sea are likely to be responsible for these regional trends, we suggest that the substantial variation in trends within regions are likely caused by processes acting at the colony level. Some long‐established colonies, including Special Areas of Conservation, are exhibiting decreasing trends.
Special Areas of Conservation often serve as de facto monitoring sites and are the focus of management efforts. The observed temporal and spatial variability in patterns of colony growth rates highlight the potential risks of using such sites to develop wider management policies.
Changing distribution of the east coast of Scotland bottlenose dolphin population and the challenges of area‐based management
Authors: Arso Civil Mònica , Quick Nicola J. , Cheney Barbara , Pirotta Enrico , Thompson Paul M. , Hammond Philip S. 
Published: September 2019

Abstract

The efficacy of marine protected areas (MPAs) depends on clear conservation objectives and ecologically meaningful boundaries. The east coast of Scotland bottlenose dolphin population expanded its distributional range during the 1990s beyond the boundaries of the Moray Firth Special Area of Conservation (SAC), originally proposed to contain their core area of distribution. Two decades on, this study assesses the importance for this population of St Andrews Bay and the Tay estuary, 300 km south of the SAC.
Photoidentification data from 2009 to 2015 were analysed using mark–recapture models to investigate the proportion of the population that uses St Andrews Bay and the Tay estuary. Habitat models were fitted to bottlenose dolphin presence–absence data to identify areas of high use.
The estimated number of dolphins using St Andrews Bay and the Tay estuary during the summer increased from 91 (95% confidence interval 78–106) in 2009 to 114 (95% confidence interval 95–137) in 2015, representing, on average, 52.5% of the total estimated east‐coast population for that period. Spatial mixing of individuals during the summer between St Andrews Bay and the Tay estuary and the Moray Firth SAC was estimated to be a minimum of ~6% per year and ~30% over the study period. The entrance to the Firth of Tay and waters around Montrose were identified as areas of consistent high use.
The importance of St Andrews Bay and the Tay estuary reconfirms that effective monitoring of the population requires dedicated effort in both this area and the SAC. The results lead to consideration of the wider context of area‐based management for the conservation/management of highly mobile wide‐ranging species and human activities that might impact them.
Age–length relationships in UK harbour seals during a period of population decline
Authors: Hall Ailsa J. , Mackey Beth , Kershaw Joanna L. , Thompson Paul 
Published: September 2019

Abstract

The abundance of harbour seals (Phoca vitulina) in the UK as a whole has increased over the past 10 years, after a 30% decline during the preceding 10 years and two major viral epidemics. However, population trends vary greatly among regions, with those on the east coast of Scotland and in the Northern Isles experiencing dramatic declines since the early 2000s and populations on the west coast being either stable or increasing. The reasons for these differences in population dynamics are unknown.
Determining whether there has been a change in somatic growth among populations can assist in assessing potential causes for abundance declines, as shifts in juvenile growth rates or maximum length at maturity may indicate changes in environmental conditions. Resource limitations are likely to result in slower growth and later age at sexual maturity, whereas causes of acute mortality could have the opposite effect.
Here, analysis of the most comprehensive length‐at‐age dataset for UK harbour seals found no evidence for major differences, or changes over time, in asymptotic length or growth parameters from fitted von Bertalanffy growth curves, across all regions, with the exception of one pairwise comparison; males from East Scotland were significantly shorter than males from all other areas by an average of almost 9 cm. However, the power to detect small changes was limited by measurement uncertainty and differences in spatial and temporal sampling effort.
Asymptotic lengths at maturity across all regions were slightly lower than published lengths for harbour seal populations in Europe, the Arctic, and Canada, with females being on average 140.5 cm (95% confidence interval 139.4, 141.6 cm) and males 149.4 cm (95% confidence interval 147.8, 151.1 cm) at adulthood.
Reliable estimates of changes in growth over time are important for understanding environmental constraints on a population, but knowledge of the underlying drivers of change is essential for the design of robust conservation and mitigation plans.
Assessing cetacean body condition: Is total lipid content in blubber biopsies a useful monitoring tool?
Authors: Kershaw Joanna L. , Brownlow Andrew , Ramp Christian A. , Miller Patrick J.O. , Hall Ailsa J. 
Published: September 2019

AbstractMeasuring the energy stores, or body condition, of cetaceans is vital for monitoring population health. Cetaceans are exposed to a range of anthropogenic stressors, including, for example, noise, contaminants, habitat degradation, reduced prey availability, ship strike, and entanglement. Tools to assess body condition in these inaccessible and vulnerable animals are required to better understand the energetic consequences of anthropogenic stressors that can impact population health and, ultimately, conservation status.Remotely obtained, dart biopsy samples are becoming an increasingly standard method of tissue collection from live, large cetaceans. Here, the potential applicability of using total lipid content in such biopsy samples to estimate overall body condition was assessed using full‐depth dorsal blubber samples from stranded ziphiids (n = 8) and balaenopterids (n = 9). First, variation in total lipid content through the blubber depth was investigated to assess the representativeness of shallow‐depth dart biopsies taken from live animals. Second, how lipid content varies by species, cause of death, sex, age class, and morphometric indices of body condition was assessed to evaluate what information about individual energy stores can be gained from such analyses.Total lipid content in dorsal, shallow‐depth blubber biopsy samples from both cetacean families provides little information on overall body condition. Stratification of lipid content through the blubber layer in the balaenopterids means that superficial biopsy samples are not representative of the lipid stores available for mobilization through the rest of the tissue. A lack of variation in blubber lipid content, both within and between the ziphiid individuals, resulted in no ability to correlate these measures with morphometrics or other health, sex, or age class covariates.Other potential markers in the blubber from remote biopsy sampling should be explored in order to further develop robust tools for estimating the body condition of free‐ranging cetaceans.
Modelling the population size and dynamics of the British grey seal
Authors: Thomas Len , Russell Debbie J.F. , Duck Callan D. , Morris Chris D. , Lonergan Mike , Empacher Fanny , Thompson Dave , Harwood John 
Published: September 2019

Abstract

Grey seals (Halichoerus grypus) were the first mammals to be protected by an Act of Parliament in the UK and are currently protected under UK, Scottish, and EU conservation legislation. Reporting requirements under each of these statutes requires accurate and timely population estimates. Monitoring is principally conducted by aerial surveys of the breeding colonies; these are used to produce estimates of annual pup production. Translating these data to estimates of adult population size requires information about demographic parameters such as fecundity and sex ratio.
An age‐structured population dynamics model is presented, which includes density dependence in pup survival, with separate carrying capacities in each of the four breeding regions considered (North Sea, Inner Hebrides, Outer Hebrides, and Orkney). This model is embedded within a Bayesian state–space modelling framework, allowing the population model to be linked to available data and the use of informative prior distributions on demographic parameters. A computer‐intensive fitting algorithm is presented based on particle filtering methods.
The model is fitted to region‐level pup production estimates from 1984 to 2010 and an independent estimate of adult population size, derived from aerial surveys of hauled‐out seals in 2008. The fitted model is used to estimate total population size from 1984 to 2010.
The population in the North Sea region has increased at a near‐constant rate; growth in the other three regions began to slow in the mid‐1990s and these populations appear to have reached carrying capacity. The total population size of seals aged 1 year or older in 2010 was estimated to be 116 100 (95% CI 98 400–138 600), an increase of <1% on the previous year.
The modelling and fitting methods are widely applicable to other wildlife populations where diverse sources of information are available and inference is required for the underlying population dynamics.
Fine‐scale habitat partitioning of Chilean and Peale's dolphins and their overlap with aquaculture
Authors: Heinrich Sonja , Genov Tilen , Fuentes Riquelme Marjorie , Hammond Philip S. 
Published: September 2019

Abstract

Predictive species distribution models (SDMs) have become powerful tools to determine habitat use patterns of mobile marine predators and their spatial overlap with potentially impacting anthropogenic activities.
This study used SDMs to investigate fine‐scale habitat use patterns of two poorly known and broadly sympatric coastal delphinids, Chilean dolphins (Cephalorhynchus eutropia) and Peale's dolphins (Lagenorhynchus australis), and their spatial interactions with intense aquaculture farming activities in the Chiloé archipelago, southern Chile.
A long‐term dataset (2002–2012) of boat‐based dolphin sightings and concurrently in situ collected environmental and anthropogenic variables was analysed using binomial Generalized Additive Models to investigate ecological drivers of each species' fine‐scale distribution and to predict dolphin occurrence spatially.
Chilean dolphins preferred shallow (<30 m deep), turbid waters, close to shore (<500 m) and river mouths which often placed them in sheltered bays and channels used intensively by shellfish farms. Peale's dolphins were also found in shallow waters but occurred over a wider range of conditions along more open or exposed coastlines. Both species had to navigate extensive salmon and shellfish farming sites to transit between areas of important habitat.
Sightings and predicted occurrence maps showed a clear pattern of spatial habitat partitioning between species, which remained stable across the 11 year study period. The identification of important habitat for Chilean dolphins warrants the consideration of spatially explicit conservation measures to limit the potential effects of overlapping salmon and shellfish farming.
The observed differences in ecological plasticity of the two sympatric species should be considered when evaluating and mitigating the effects of environmental change and ongoing anthropogenic pressures on their nearshore habitat. The estimated species–environment relationships could also be used to predict where dolphin habitat and anthropogenic activities are most likely to overlap in other parts of the species' ranges.
Habitat use of a coastal delphinid population investigated using passive acoustic monitoring
Authors: Palmer Kaitlin J. , Brookes Kate L. , Davies Ian M. , Edwards Ewan , Rendell Luke 
Published: September 2019

Abstract

The population of bottlenose dolphins in eastern Scotland has undergone significant range expansion since the 1990s, when a Special Area of Conservation was established for the population.
Distribution of this population is well described within areas of its range where intensive work has been carried out, such as the inner Moray Firth, St Andrews Bay and the Tay estuary area. However, elsewhere in their range, habitat use is less well understood.
In this study, a large‐scale and long‐term passive acoustic array was used to gain a better understanding of bottlenose dolphin habitat use in eastern Scottish waters, complementing and augmenting existing visual surveys.
Data from the array were analysed using a three‐stage approach. First, acoustic occupancy results were reported; second, temporal trends were modelled; and third, a spatial–temporal‐habitat model of acoustic occupancy was created.
Results from the acoustic occupancy are in agreement with visual studies that found that areas near known foraging locations were consistently occupied. Results from the temporal trend analysis were inconclusive. Habitat modelling showed that, throughout their range, bottlenose dolphins are most likely to be detected closer to shore, and at a constant distance from shore, in deeper water.
Progenitor Cells from the Adult Human Inner Ear
Authors: Senn Pascal , Mina Amir , Volkenstein Stefan , Kranebitter Veronika , Oshima Kazuo , Heller Stefan 
Published: September 2019

ABSTRACTLoss of inner ear hair cells leads to incurable balance and hearing disorders because these sensory cells do not effectively regenerate in humans. A potential starting point for therapy would be the stimulation of quiescent progenitor cells within the damaged inner ear. Inner ear progenitor/stem cells, which have been described in rodent inner ears, would be principal candidates for such an approach. Despite the identification of progenitor cell populations in the human fetal cochlea and in the adult human spiral ganglion, no proliferative cell populations with the capacity to generate hair cells have been reported in vestibular and cochlear tissues of adult humans. The present study aimed at filling this gap by isolating colony‐forming progenitor cells from surgery‐ and autopsy‐derived adult human temporal bones in order to generate inner ear cell types in vitro. Sphere‐forming and mitogen‐responding progenitor cells were isolated from vestibular and cochlear tissues. Clonal spheres grown from adult human utricle and cochlear duct were propagated for a limited number of generations. When differentiated in absence of mitogens, the utricle‐derived spheres robustly gave rise to hair cell‐like cells, as well as to cells expressing supporting cell‐, neuron‐, and glial markers, indicating that the adult human utricle harbors multipotent progenitor cells. Spheres derived from the adult human cochlear duct did not give rise to hair cell‐like or neuronal cell types, which is an indication that human cochlear cells have limited proliferative potential but lack the ability to differentiate into major inner ear cell types. Anat Rec, 303:461–470, 2020. © 2019 The Authors. The Anatomical Record published by Wiley Periodicals, Inc. on behalf of American Association of Anatomists.
Enhanced production of podophyllotoxin, kaempferol, and quercetin from callus culture of Dysosma pleiantha (Hance) Woodson: An endangered medicinal plant
Authors: Karuppaiya Palaniyandi , Tsay Hsin Sheng 
Published: September 2019

AbstractDysosma pleiantha (Hance) Woodson is one of the endangered traditional Chinese medicinal herbs, highly valued for its medicinal properties by Taiwan's mountain tribes. The present study aims to develop an efficient protocol for callus biomass by optimizing suitable culture medium, carbon source culture condition, and enhanced production of pharmaceutically important podophyllotoxin, kaempferol, and quercetin from callus culture of D. pleiantha under the influence of different additives. Best callus induction was achieved in Gamborg's medium (B5) with 1 mg/L 2,4‐dichlorophenoxyacetic acid (2,4‐D) along with 0.2 mg/L kinetin under dark condition. Tender leaves of D. pleiantha showed the maximum of 86% callus induction among the different explants tested. Highest leaf callus proliferation was noted in B5 medium with 1 mg/L 2,4‐D incubated under complete darkness. In addition, it was found that B5 medium with 1 mg/L 2,4‐D along with 2 g/L peptone produced more leaf callus biomass and enhanced production of podophyllotoxin (16.3‐fold), kaempferol (12.39‐fold), and quercetin (5.03‐fold) compared to control. Therefore, D. pleiantha callogenesis can provide an alternative source for enhanced production of secondary compounds regardless of the exploitation of its natural plant population.