bluuebunny/crossref_metadata_2025_split huggingface dataset:
Proteolytic analysis ofTrichoderma reeseiin celluase-inducing condition reveals a role for trichodermapepsin (TrAsP) in cellulase production
Authors: Daranagama Nayani Dhanushka , Shioya Koki , Yuki Masahiro , Sato Haruna , Ohtaki Yuki , Suzuki Yoshiyuki , Shida Yosuke , Ogasawara Wataru 
Published: February 2019

AbstractFilamentous fungi produce a variety of proteases with significant biotechnological potential and show diverse substrate specificities. Proteolytic analysis of the industrial enzyme producer Trichoderma reesei has been sparse. Therefore, we determined the substrate specificity of T. reesei secretome and its main protease Trichodermapepsin (TrAsP) up to P1 position using FRETS-25Xaa-libraries. The role of TrAsP was analyzed using T. reesei QM9414 and the deletant QM∆trasp in Avicel. We observed higher activities of CMCase, Avicelase, and Xylanase in QM∆t rasp compared to that of QM9414. Saccharification rate of cellulosic biomass also increased when using secretome of QM∆trasp but the effect was not significant due to the absence of difference in BGL activity compared to QM9414. Higher TrAsP was produced when monosaccharides were used as a carbon source compared to cellulase inducers such as Avicel and α-sophorose. These results elucidate the relationship between TrAsP and cellulase production in T. reesei and suggest a physiological role for TrAsP.
High-frequency transition characteristics of synthetic natural gas combustion in gas turbine
Authors: Joo S. , Kwak S. , Kim S. , Lee J. , Yoon Y. 
Published: February 2019

AbstractIn this study, the combustion instability and emission characteristics of flames of different H2/CH4compositions were investigated in a partially premixed model gas turbine combustor. A mode shift in the frequency of instability occurred under varying experimental conditions from the first to the seventh mode of longitudinal frequency in the combustor, and a parametric study was conducted to determine the reasons for this shift by using the length of the combustor, a factor that determines the mode frequency of longitudinal instability, as the main parameter. Furthermore, heat load and fuel composition (H2ratio) were considered as parameters to compare the phenomenon under different conditions. The GRI-3.0 CANTERA code, OH chemiluminescence and the Abel inversion process were applied to analyse the frequency mode shift. NOxemissions, which occurred through the thermal NOxmechanism, increased with increasing heat load and H2ratio. The instability frequency shifted from the first to the seventh mode as the H2ratio increased in the H2/CH4mixture. However, 100% H2as fuel did not cause combustion instability because it has a higher burning velocity and extinction stretch rate than CH4. Furthermore, the laminar flame speed influenced the frequency mode shift. These phenomena were confirmed by the flame shapes. The Abel inversion process was applied to obtain the cross section of the flames from averaged OH chemiluminescence images. Stable and unstable flames were identified from the radial profile of OH concentration. The combustor length was found to not influence frequency mode shift, whereas the H2ratio significantly influenced it as well as the flame shape. The results of this experimental study can help in the reliable operation of gas turbine systems in SNG plants.
Defizite in den Exekutivfunktionen von Kindern mit ADHS
Authors: Schwörer Mona Céline , Jaščenoka Julia , Nitkowski Dennis , Petermann Franz , Vasileva Mira , Petermann Ulrike 
Published: February 2019

Zusammenfassung. Das Erhebungsverfahren ADHS-KJ beinhaltet eine differenzierte neuropsychologische Erfassung der exekutiven Funktionen sowie eine standardisierte Verhaltensbeobachtung des hyperaktiven Verhaltens von Kindern und Jugendlichen im Alter von 6;0 bis 12;11 Jahren. Die Aussagekraft des neuropsychologischen Moduls des ADHS-KJ wurde anhand einer Gruppe von Kindern mit einer ADHS-Diagnose ( n = 58) und einer parallelisierten Kontrollgruppe untersucht ( n = 58); es wurde überprüft, inwieweit das Alter und die medikamentöse Behandlung der Kinder die Ergebnisse beeinflussten. Zusätzlich wurden die neuropsychologischen Ergebnisse mit Befunden einer standardisierten Verhaltensbeobachtung in Zusammenhang gesetzt. Es wurde belegt, dass das Erhebungsverfahren ADHS-KJ zwischen Kindern mit und ohne eine ADHS auf der Basis der Komponenten der exekutiven Funktionen und des darauf bezogenen Gesamttestwertes des ADHS-KJ sowie der Beobachtung des hyperkinetischen Verhaltens differenzieren konnte. Die Unterschiede zwischen der ADHS- und Kontrollgruppe wurden durch kleine ( d = .36) bis große ( d = .95) Effektstärken gekennzeichnet. Das Erhebungsverfahren ADHS-KJ differenzierte deutlich zwischen jüngeren und älteren Kindern mit ADHS ( d ≥ 1.00). Das Erhebungsverfahren ADHS-KJ kann als multimodales und multimethodales Vorgehen für die Diagnostik einer ADHS empfohlen werden, wobei die Auffälligkeiten in den Exekutivfunktionen besonders kennzeichnend für Kinder der Altersgruppe von sechs bis acht Jahren sind.
Over 100-THz bandwidth selective difference frequency generation at LaAlO3/SrTiO3 nanojunctions
Authors: Chen Lu , Sutton Erin , Lee Hyungwoo , Lee Jung-Woo , Li Jianan , Eom Chang-Beom , Irvin Patrick , Levy Jeremy 
Published: February 2019

AbstractThe ability to combine continuously tunable narrow-band terahertz (THz) generation that can access both the far-infrared and mid-infrared regimes with nanometer-scale spatial resolution is highly promising for identifying underlying light-matter interactions and realizing selective control of rotational or vibrational resonances in nanoparticles or molecules. Here, we report selective difference frequency generation with over 100 THz bandwidth via femtosecond optical pulse shaping. The THz emission is generated at nanoscale junctions at the interface of LaAlO3/SrTiO3 (LAO/STO) that is defined by conductive atomic force microscope lithography, with the potential to perform THz spectroscopy on individual nanoparticles or molecules. Numerical simulation of the time-domain signal facilitates the identification of components that contribute to the THz generation. This ultra-wide-bandwidth tunable nanoscale coherent THz source transforms the LAO/STO interface into a promising platform for integrated lab-on-chip optoelectronic devices with various functionalities.
Over-expression of FSIP1 promotes breast cancer progression and confers resistance to docetaxel via MRP1 stabilization
Authors: Yan Meisi , Wang Jinsong , Ren Yanlv , Li Lin , He Weidan , Zhang Ying , Liu Tong , Li Zhigao 
Published: February 2019

AbstractFibrous sheath-interacting protein 1 (FSIP1) functions centrally in breast carcinogenesis and progression, although its exact role remains to be clarified. Therefore, we sought to establish a correlation between the clinico-pathological features of breast cancer and FSIP1 expression in breast cancer tissues, as well as to validate its role in tumor progression and chemo-resistance. We analyzed FSIP1 expression in the breast cancer and para-tumor tissues by immunohistochemistry. We performed MTT, Caspase-Glo 3/7 Assay, Annexin V staining, wound healing and trans-well assays to evaluate cellular apoptosis, proliferation, migration and invasion in FSIP1 knockout and wild-type breast cancer cell lines. Additionally, we examined the effects of FSIP1 on docetaxel sensitivity in a nude mice model transplanted with control or FSIP1 knockout breast cancer cells, and also evaluate its role in tumor metastasis. FSIP1 and MRP1 interaction was determined by co-immunoprecipitation and mass spectrometry. We found that breast cancer cells and tissues consistently demonstrated elevated FSIP1 expressions, which correlated with poor overall survival. Notably, patients with high FSIP1 expression in their tumors undergoing docetaxel neoadjuvant chemotherapy had shorter disease-free survival. FSIP1 knockout in breast cancer cells significantly increased their sensitivity to docetaxel both in vitro and in vivo. Mechanistically, FSIP1 bound to the multidrug resistance protein 1 (MRP1) and stabilized it, and knocking out FSIP1 decreased MRP1 expression and increased cellular docetaxel accumulation. In sum, FSIP1 promotes breast carcinogenesis and mediates docetaxel resistance, and may serve as a novel target in the development of breast cancer therapies.
TIGAR promotes neural stem cell differentiation through acetyl-CoA-mediated histone acetylation
Authors: Zhou Wenjuan , Zhao Tiantian , Du Jingyi , Ji Guangyu , Li Xinyue , Ji Shufang , Tian Wenyu , Wang Xu , Hao Aijun 
Published: February 2019

AbstractCellular metabolism plays a crucial role in controlling the proliferation, differentiation, and quiescence of neural stem cells (NSCs). The metabolic transition from aerobic glycolysis to oxidative phosphorylation has been regarded as a hallmark of neuronal differentiation. Understanding what triggers metabolism reprogramming and how glucose metabolism directs NSC differentiation may provide new insight into the regenerative potential of the brain. TP53 inducible glycolysis and apoptosis regulator (TIGAR) is an endogenous inhibitor of glycolysis and is highly expressed in mature neurons. However, its function in embryonic NSCs has not yet been explored. In this study, we aimed to investigate the precise roles of TIGAR in NSCs and the possible involvement of metabolic reprogramming in the TIGAR regulatory network. We observed that TIGAR is significantly increased during brain development as neural differentiation proceeds, especially at the peak of NSC differentiation (E14.5–E16.5). In cultured NSCs, knockdown of TIGAR reduced the expression of microtubule-associated protein 2 (MAP2), neuron-specific class III beta-tubulin (Tuj1), glial fibrillary acidic protein (GFAP), Ngn1, and NeuroD1, and enhanced the expression of REST, suggesting that TIGAR is an important regulator of NSC differentiation. Furthermore, TIGAR enhanced the expression of lactate dehydrogenase B (LDHB) and the mitochondrial biogenesis and oxidative phosphorylation (OXPHOS) markers, peroxisome proliferator-activated receptor gamma coactivator 1 (PGC-1α), nuclear respiratory factor (NRF1), and MitoNEET during NSC differentiation. TIGAR can decrease lactate production and accelerate oxygen consumption and ATP generation to maintain a high rate of OXPHOS in differentiated NSCs. Interestingly, knockdown of TIGAR decreased the level of acetyl-CoA and H3K9 acetylation at the promoters of Ngn1, Neurod1, and Gfap. Acetate, a precursor of acetyl-CoA, increased the level of H3K9 acetylation and rescued the effect of TIGAR deficiency on NSC differentiation. Together, our data demonstrated that TIGAR promotes metabolic reprogramming and regulates NSC differentiation through an epigenetic mechanism.
Laparoscopic-based perivascular unilateral renal sympathetic nerve denervation for treating resistant hypertension: a case report
Authors: Gao Chuanyu , Zhao Linwei , Zhu Lijie , Li Muwei , Ding Degang , Liu Zhonghua , Fan Zhiqiang , Zhang You , Zhao Wenli , Wang Jiguang 
Published: February 2019

AbstractA 38-year-old man with a history of resistant hypertension for more than 10 years underwent laparoscopic-based perivascular unilateral renal sympathetic nerve denervation in 2012. After the operation, the patient’s blood pressure has been controllable while the antihypertensive drug intake has decreased over 6 years. Laparoscopic-based perivascular unilateral renal sympathetic nerve denervation may be a potentially feasible and effective option in treating patients with resistant hypertension.
Deep brain activities can be detected with magnetoencephalography
Authors: Pizzo Francesca , Roehri N. , Medina Villalon S. , Trébuchon A. , Chen S. , Lagarde S. , Carron R. , Gavaret M. , Giusiano B. , McGonigal A. , Bartolomei F. , Badier J. M. , Bénar C. G. 
Published: February 2019

AbstractThe hippocampus and amygdala are key brain structures of the medial temporal lobe, involved in cognitive and emotional processes as well as pathological states such as epilepsy. Despite their importance, it is still unclear whether their neural activity can be recorded non-invasively. Here, using simultaneous intracerebral and magnetoencephalography (MEG) recordings in patients with focal drug-resistant epilepsy, we demonstrate a direct contribution of amygdala and hippocampal activity to surface MEG recordings. In particular, a method of blind source separation, independent component analysis, enabled activity arising from large neocortical networks to be disentangled from that of deeper structures, whose amplitude at the surface was small but significant. This finding is highly relevant for our understanding of hippocampal and amygdala brain activity as it implies that their activity could potentially be measured non-invasively.
Bioinspired nacre-like alumina with a bulk-metallic glass-forming alloy as a compliant phase
Authors: Wat Amy , Lee Je In , Ryu Chae Woo , Gludovatz Bernd , Kim Jinyeon , Tomsia Antoni P. , Ishikawa Takehiko , Schmitz Julianna , Meyer Andreas , Alfreider Markus , Kiener Daniel , Park Eun Soo , Ritchie Robert O. 
Published: February 2019

AbstractBioinspired ceramics with micron-scale ceramic “bricks” bonded by a metallic “mortar” are projected to result in higher strength and toughness ceramics, but their processing is challenging as metals do not typically wet ceramics. To resolve this issue, we made alumina structures using rapid pressureless infiltration of a zirconium-based bulk-metallic glass mortar that reactively wets the surface of freeze-cast alumina preforms. The mechanical properties of the resulting Al2O3 with a glass-forming compliant-phase change with infiltration temperature and ceramic content, leading to a trade-off between flexural strength (varying from 89 to 800 MPa) and fracture toughness (varying from 4 to more than 9 MPa·m½). The high toughness levels are attributed to brick pull-out and crack deflection along the ceramic/metal interfaces. Since these mechanisms are enabled by interfacial failure rather than failure within the metallic mortar, the potential for optimizing these bioinspired materials for damage tolerance has still not been fully realized.
Tightly-orchestrated rearrangements govern catalytic center assembly of the ribosome
Authors: Zhou Yi , Musalgaonkar Sharmishtha , Johnson Arlen W. , Taylor David W. 
Published: February 2019

AbstractThe catalytic activity of the ribosome is mediated by RNA, yet proteins are essential for the function of the peptidyl transferase center (PTC). In eukaryotes, final assembly of the PTC occurs in the cytoplasm by insertion of the ribosomal protein Rpl10 (uL16). We determine structures of six intermediates in late nuclear and cytoplasmic maturation of the large subunit that reveal a tightly-choreographed sequence of protein and RNA rearrangements controlling the insertion of Rpl10. We also determine the structure of the biogenesis factor Yvh1 and show how it promotes assembly of the P stalk, a critical element for recruitment of GTPases that drive translation. Together, our structures provide a blueprint for final assembly of a functional ribosome.
Recombinant measles vaccine expressing malaria antigens induces long-term memory and protection in mice
Authors: Mura Marie , Ruffié Claude , Combredet Chantal , Aliprandini Eduardo , Formaglio Pauline , Chitnis Chetan E. , Amino Rogerio , Tangy Frédéric 
Published: February 2019

AbstractFollowing the RTS,S malaria vaccine, which showed only partial protection with short-term memory, there is strong support to develop second-generation malaria vaccines that yield higher efficacy with longer duration. The use of replicating viral vectors to deliver subunit vaccines is of great interest due to their capacity to induce efficient cellular immune responses and long-term memory. The measles vaccine virus offers an efficient and safe live viral vector that could easily be implemented in the field. Here, we produced recombinant measles viruses (rMV) expressing malaria “gold standard” circumsporozoïte antigen (CS) of Plasmodium berghei (Pb) and Plasmodium falciparum (Pf) to test proof of concept of this delivery strategy. Immunization with rMV expressing PbCS or PfCS induced high antibody responses in mice that did not decrease for at least 22 weeks post-prime, as well as rapid development of cellular immune responses. The observed long-term memory response is key for development of second-generation malaria vaccines. Sterile protection was achieved in 33% of immunized mice, as usually observed with the CS antigen, and all other immunized animals were clinically protected from severe and lethal Pb ANKA-induced cerebral malaria. Further rMV-vectored malaria vaccine candidates expressing additional pre-erythrocytic and blood-stage antigens in combination with rMV expressing PfCS may provide a path to development of next generation malaria vaccines with higher efficacy.
Attentional processes in typically developing children as revealed using brain event-related potentials and their source localization in Attention Network Test
Authors: Santhana Gopalan Praghajieeth Raajhen , Loberg Otto , Hämäläinen Jarmo Arvid , Leppänen Paavo H. T. 
Published: February 2019

AbstractAttention-related processes include three functional sub-components: alerting, orienting, and inhibition. We investigated these components using EEG-based, brain event-related potentials and their neuronal source activations during the Attention Network Test in typically developing school-aged children. Participants were asked to detect the swimming direction of the centre fish in a group of five fish. The target stimulus was either preceded by a cue (centre, double, or spatial) or no cue. An EEG using 128 electrodes was recorded for 83 children aged 12–13 years. RTs showed significant effects across all three sub-components of attention. Alerting and orienting (responses to double vs non-cued target stimulus and spatially vs centre-cued target stimulus, respectively) resulted in larger N1 amplitude, whereas inhibition (responses to incongruent vs congruent target stimulus) resulted in larger P3 amplitude. Neuronal source activation for the alerting effect was localized in the right anterior temporal and bilateral occipital lobes, for the orienting effect bilaterally in the occipital lobe, and for the inhibition effect in the medial prefrontal cortex and left anterior temporal lobe. Neuronal sources of ERPs revealed that sub-processes related to the attention network are different in children as compared to earlier adult fMRI studies, which was not evident from scalp ERPs.
Activation of Toll-like receptor 2 induces B1 and B2 kinin receptors in human gingival fibroblasts and in mouse gingiva
Authors: Souza Pedro P. C. , Lundberg Pernilla , Lundgren Inger , Magalhães Fernando A. C. , Costa-Neto Claudio M. , Lerner Ulf H. 
Published: February 2019

AbstractThe regulation of the kallikrein-kinin system is an important mechanism controlling vasodilation and promoting inflammation. We aimed to investigate the role of Toll-like receptor 2 (TLR2) in regulating kinin B1 and B2 receptor expression in human gingival fibroblasts and in mouse gingiva. Both P. gingivalis LPS and the synthetic TLR2 agonist Pam2CSK4 increased kinin receptor transcripts. Silencing of TLR2, but not of TLR4, inhibited the induction of kinin receptor transcripts by both P. gingivalis LPS and Pam2CSK4. Human gingival fibroblasts (HGF) exposed to Pam2CSK4 increased binding sites for bradykinin (BK, B2 receptor agonist) and des-Arg10-Lys-bradykinin (DALBK, B1 receptor agonist). Pre-treatment of HGF for 24 h with Pam2CSK4 resulted in increased PGE2 release in response to BK and DALBK. The increase of B1 and B2 receptor transcripts by P. gingivalis LPS was not blocked by IL-1β neutralizing antibody; TNF-α blocking antibody did not affect B1 receptor up-regulation, but partially blocked increase of B2 receptor mRNA. Injection of P. gingivalis LPS in mouse gingiva induced an increase of B1 and B2 receptor mRNA. These data show that activation of TLR2 in human gingival fibroblasts as well as in mouse gingival tissue leads to increase of B1 and B2 receptor mRNA and protein.
A patch-based super resolution algorithm for improving image resolution in clinical mass spectrometry
Authors: Ščupáková Klára , Terzopoulos Vasilis , Jain Saurabh , Smeets Dirk , Heeren Ron M. A. 
Published: February 2019

AbstractMass spectrometry imaging (MSI) and histology are complementary analytical tools. Integration of the two imaging modalities can enhance the spatial resolution of the MSI beyond its experimental limits. Patch-based super resolution (PBSR) is a method where high spatial resolution features from one image modality guide the reconstruction of a low resolution image from a second modality. The principle of PBSR lies in image redundancy and aims at finding similar pixels in the neighborhood of a central pixel that are then used to guide reconstruction of the central pixel. In this work, we employed PBSR to increase the resolution of MSI. We validated the proposed pipeline by using a phantom image (micro-dissected logo within a tissue) and mouse cerebellum samples. We compared the performance of the PBSR with other well-known methods: linear interpolation (LI) and image fusion (IF). Quantitative and qualitative assessment showed advantage over the former and comparability with the latter. Furthermore, we demonstrated the potential applicability of PBSR in a clinical setting by accurately integrating structural (i.e., histological) and molecular (i.e., MSI) information from a case study of a dog liver.
Antibodies to a CA 19-9 Related Antigen Complex Identify SOX9 Expressing Progenitor Cells In Human Foetal Pancreas and Pancreatic Adenocarcinoma
Authors: Farley Alison M. , Braxton David R. , Li Jonathan , Trounson Karl , Sakar-Dey Subhanwita , Nayer Bhavana , Ikeda Tatsuhiko , Lau Kevin X. , Hardikar Winita , Hasegawa Kouichi , Pera Martin F. 
Published: February 2019

AbstractThe Sialyl Lewis A antigen, or CA 19-9, is the prototype serum biomarker for adenocarcinoma of the pancreas. Despite extensive clinical study of CA 19-9 in gastrointestinal malignancies, surprisingly little is known concerning the specific cell types that express this marker during development, tissue regeneration and neoplasia. SOX9 is a transcription factor that plays a key role in these processes in foregut tissues. We report the biochemistry and tissue expression of the GCTM-5 antigen, a pancreatic cancer marker related to, but distinct from, CA19-9. This antigen, defined by two monoclonal antibodies recognising separate epitopes on a large glycoconjugate protein complex, is co-expressed with SOX9 by foregut ductal progenitors in the developing human liver and pancreas, and in pancreatic adenocarcinoma. These progenitors are distinct from cell populations identified by DCLK1, LGR5, or canonical markers of liver and pancreatic progenitor cells. Co-expression of this antigen complex and SOX9 also characterises the ductal metaplasia of submucosal glands that occurs during the development of Barrett’s oesophagus. The GCTM-5 antigen complex can be detected in the sera of patients with pancreatic adenocarcinoma. The GCTM-5 epitope shows a much more restricted pattern of expression in the normal adult pancreas relative to CA19-9. Our findings will aid in the identification, characterisation, and monitoring of ductal progenitor cells during development and progression of pancreatic adenocarcinoma in man.