bluuebunny/crossref_metadata_2025_split huggingface dataset:
Numerical simulations of the 2004 Indian Ocean tsunami deposits' thicknesses and emplacements
Authors:   Syamsidik, Al'ala Musa , Fritz Hermann M. , Fahmi Mirza , Hafli Teuku Mudi 
Published: June 2019

Abstract. After more than a decade of recurring tsunamis,
identification of tsunami deposits, a part of hazard characterization, still
remains a challenging task that is not fully understood. The lack of sufficient
monitoring equipment and rare tsunami frequency are among the primary
obstacles that limit our fundamental understanding of sediment transport
mechanisms during a tsunami. The use of numerical simulations to study
tsunami-induced sediment transport was rare in Indonesia until the
2004 Indian Ocean tsunami. This study aims to couple two hydrodynamic numerical
models in order to reproduce tsunami-induced sediment deposits, i.e., their
locations and thicknesses. Numerical simulations were performed using the
Cornell Multi-grid Coupled Tsunami (COMCOT) model and Delft3D. This study
reconstructed tsunami wave propagation from its source using COMCOT, which
was later combined with Delft3D to map the location of the tsunami deposits
and calculate their thicknesses. Two-dimensional horizontal (2-DH) models
were used as part of both simulation packages. Four sediment transport
formulae were used in the simulations, namely van Rijn 1993, Engelund–Hansen 1967,
Meyer-Peter–Mueller (MPM) 1948, and Soulsby 1997. Lhoong, in the Aceh
Besar District, located approximately 60 km southwest of Banda Aceh, was
selected as the study area. Field data collected in 2015 and 2016 validated
the forward modeling techniques adopted in this study. However, agreements
between numerical simulations and field observations were more robust using
data collected in 2005, i.e., just months after the tsunami (Jaffe et al.,
2006). We conducted pit (trench) tests at select locations to obtain tsunami
deposit thickness and grain size distributions. The resulting numerical
simulations are useful when estimating the locations and the thicknesses of
the tsunami deposits. The agreement between the field data and the numerical
simulations is reasonable despite a trend that overestimates the field observations.
Applicability of Moyer’s prediction tables to estimate the mesio-distal diameter of canines and premolars
Authors: De Sousa Galdino Amanda , Braga Ramos Tânia , Marques Filgueiras Vitor , Wanderley Lacerda Rosa Helena 
Published: June 2019

Objective: The aim of this study was to verify the applicability of Moyer’s prediction tables to estimate the mesio-distal diameter of canines and pre-molars in a population of North-Eastern Brazil. Materials and Methods: A sample of 100 plaster moulds of 12-18-year-old patients was selected from the dental archives of the Brazilian Association of Orthodontists Dental School Clinic in the city of João Pessoa, State of Paraiba. Analyses were performed with R software (version 3.1.3). The upper and lower canines and premolars on both sides of the arch were measured. Data Analysis: Linear regression analysis was used to assess the closeness of the estimated values in each percentile of Moyer’s prediction table. Analyses were performed at a significance level of 5%. Results: Gender dimorphism (P < 0.001) was found in both upper and lower arches. In the upper arch, the best regression models for data analysis of female, male and both were, respectively, p5 and p6”, p25 and p35, and p35 and 75, whereas in the lower arch were p15, p35 and p75, with “p75 being the best-fitted percentile following application of correction equations for both genders. Conclusions: The Moyer’s prediction table can be applied for estimating the mesio-distal diameters of canines and pre-molars, provided that a correction factor is used for the population under study.
Circle Back: Immigrant Memories and Fungal Networks
Authors: Softić Tanja 
Published: June 2019

ABSTRACT
This article is about three bodies of visual work that raise questions of cultural belonging, hybridity, and memory. I use languages of printmaking, drawing, photography, and poetry to creatively trace processes of memory of place and meanings we make with it. In Migrant Universe, drawings function as rearrangeable continua of maps, landscapes, and portraits of memory and identity. Catalogue of Silence, an installation of photographs, an essay, and poems about the state of cultural institutions in my native city of Sarajevo, is an elegy for what has been irretrievably lost as well as a testament of hope that the city will rebound and be, as it was in the past, a fertile ground for new ways of cultural thriving. In Beginnings and Endings, a series of etchings, images culled from science, explosion traces, and comic book speech bubbles are placed on liquid and unsteady ground, invaded by fungi, functioning as icons of precarity: the loss and the promise of it. In this precipitous moment in human history, in American history, what can we learn about our survival as a species, and a global civilization, from the stories of migrants, seeds, and mushrooms?
De PEPP-verordening. Pensioenfondsen: Quo vadis?
Authors: van Meerten H. , Wouters A.K.R. 
Published: June 2019

De PEPP-verordening. Pensioenfondsen: Quo vadis?
Het voorstel van 29 juni 2017 betreffende een Verordening van het Europees Parlement en de Raad voor een Pan-Europees Persoonlijk Pensioenproduct (hierna: PEPP) werd in Nederland met argusogen ontvangen. Met dit voorstel wilde de Europese Commissie een impuls geven om de fragmentatie van nationale markten op het gebied van persoonlijke pensioenen aan te pakken. Via het PEPP wil de EU-wetgever een vrijwillig, aanvullend, eenvoudig en kostenbesparend pensioenproduct in het leven roepen dat grotendeels op EU-niveau wordt gereguleerd. Vanwege de meeneembaarheid voor consumenten is PEPP een welkome aanvulling voor de pensioenen van EU-burgers. Nederland echter heeft te allen tijde kritisch tegenover de komst van een PEPP gestaan vanwege onder andere een vermeende inbreuk op de ‘verplichtstelling’ en de rol voor de Europese Autoriteit voor verzekeringen en bedrijfspensioenen (EIOPA). In dit artikel wordt het PEPP besproken: wat is de meerwaarde van het PEPP? Is de vrees van Nederland wel terecht?Voorstel voor een Verordening van het Europees Parlement en de Raad inzake een pan-Europees persoonlijk pensioenproduct (PEPP).
Inbesteding bij schaarse vergunningen?
Authors: Wildemors R.G.J. , Wolswinkel C.J. 
Published: June 2019

Inbesteding bij schaarse vergunningen?
Bij de verdeling van schaarse vergunningen moet de overheid in beginsel mededingingsruimte voor potentiële gegadigden creëren. Op deze mededingingsplicht zijn echter uitzonderingen denkbaar die onderhandse vergunningverlening rechtvaardigen. Een van die uitzonderingen is van institutionele aard en richt zich op de bijzondere relatie tussen de vergunningverlener en de vergunninghouder. Deze uitzonderingscategorie is aanvankelijk in het aanbestedingsrecht onder de noemer van (quasi-)inbesteding ontwikkeld. Centraal in deze bijdrage staan de vragen in hoeverre vergelijkbare institutionele excepties ook van toepassing zijn bij de verdeling van schaarse vergunningen en hoe die excepties kunnen worden ingepast in het Unierecht en in het nationale verdelingsrecht.
Ewolucja rozmieszczenia scenicznego orkiestry symfonicznej – od klasycyzmu do współczesności
Authors: Orczykowska Aleksandra 
Published: June 2019

W artykule nakreślona została w porządku chronologicznym, od epoki klasycyzmu do XX wieku, historia ewolucji scenicznego rozmieszczania muzyków orkiestrowych. Przedstawiona jest w nim także charakterystyka układów przestrzennych orkiestry symfonicznej, zwanych inaczej antyfonalnymi lub topofonicznymi. W toku ewolucji historycznych typów rozmieszczenia instrumentalistów w orkiestrze symfonicznej we współcześnie i powszechnie znane oraz stosowane zaszły tak poważne zmiany jak np.: rezygnacja z podziału przestrzennego na grupy (np. realizatorów basso continuo, ripieni i soli) na rzecz spójnych sekcji instrumentów tego samego typu, przemieszczenie grupy I skrzypiec z prawej na lewą stronę sceny czy przeniesienie chóru za orkiestrę. Z wielu istniejących w praktyce koncertowej wersji rozmieszczenia orkiestry symfonicznej, wprowadzanych pomiędzy XVII a XIX stuleciem, w wieku XX wyłoniły się tradycyjne cztery układy rozmieszczenia, które swoją strukturę opierają na rotacji w sekcji instrumentów smyczkowych. Jednym z uzasadnionych wyjątków odbiegających od kształtu rozpowszechnionych schematów jest topofoniczne rozmieszczenie muzyków orkiestrowych, które zawsze dostosowywane jest do: zamysłu kompozytora (lub ewentualnie dyrygenta), struktury konkretnego dzieła, akustyki i budowy sali koncertowej oraz idei osiągnięcia zamierzonego efektu antyfonalnego brzmienia zespołu.
Musicon – narzędzie rozwijające aktywność muzyczną dzieci
Authors: Laszuk Kamil , Laszuk Ida , Kozik Jakub , Sowik Rafał 
Published: June 2019

Musicon to niezwykły wynalazek. Można go nazwać muzyczną maszyną przypominającą pozytywkę. To nowe urządzenie dydaktyczne dzięki swej atrakcyjności pobudza do swobodnych i twórczych zabaw rozwijających muzykalność. Wszystkim, którzy z niego korzystają przynosi radość i uczucie sukcesu bez względu na wiek i poziom umiejętności. Autorzy niniejszego artykułu przedstawiając walory Musiconu skupili się na możliwościach jego wykorzystania w edukacji muzycznej dzieci w młodszym wieku szkolnym.
Midline Incision versus Chevron Incision in Open Radical Nephrectomy: Quality of Life Differences
Authors: Widyasmara Her Bayu , Johanes Charles , Mochtar Chaidir A. 
Published: June 2019

Objective: Open radical nephrectomy can be performed through midline or chevron incision. This study aims to compare the quality of life between midline and chevron incision in open radical the nephrectomy since comparison studies between these approach focused on quality life are still lacking.
Methods: This study includes total 31 patients that underwent open radical nephrectomy in Cipto Mangunkusumo Hospital Indonesia. The subjects were divided into midline and chevron groups using simple random sampling. Modified WHOQOL BREF and VAS pain score were compared between these groups.
Results: Total 31 subjects included, with a male: female ratio 2.33:1 and age mean 49.81±13.1 with the incidence are highest at 41-60 years old. In our study, most subjects were diagnosed in T3-T4 with 58,07% overall. Clear cell renal cell carcinoma is the most frequent pathology result with 41,93% followed by Paper Renal cell Carcinoma 12.90%. VAS score is higher in Chevron group with result 2,47±1,40 compare to Midline group with 2,13±1,99. Match to the VAS score result, The Modified WHOQOL BREF Chevron group with mean 71,80±10,24 is lower than Midline group with 77,69±13,65. However, these differences are not statistically significant. The midline group was recorded two complications (IVC and spleen injury), whereas one complication (IVC injury) recorded in chevron group.
Conclusion: Both chevron and the midline are safe methods for open nephrectomy. Even the midline incision show better VAS score and quality of life, and there are no significant differences between midline or chevron incision in postoperative quality of life, VAS scores and intraoperative bleeding.
T
hermodesulforhabdus
Authors: Galushko Alexander , Kuever Jan 
Published: June 2019

Abstract

Ther.mo.de.sul.fo.rhab'dus. Gr. adj.
thermos
warm, hot; L. pref.
de
from; L. masc. n.
sulfur
sulfur; Gr. fem. n.
rhabdos
rod; N.L. fem. n.
Thermodesulforhabdus
thermophilic, rod‐shaped, sulfate reducer.

Desulfobacterota / Syntrophobacteria / Syntrophobacterales / Thermodesulforhabdaceae / Thermodesulforhabdus

Rod‐shaped cells, 1 × 2.5 µm. Occur singly or in pairs. Spore formation is not observed. Gram‐stain‐negative. Motile. Strictly anaerobic, having a respiratory type of metabolism. Chemoorganoheterotrophic, using straight‐chain fatty acids, other organic acids, and ethanol as carbon sources and electron donors. Electron donors are completely oxidized to CO
2
via the anaerobic C
1
pathway (carbon monoxide dehydrogenase or Wood–Ljungdahl pathway). Sulfate and sulfite serve as terminal electron acceptors and are reduced to H
2
S. Thiosulfate, sulfur, fumarate, and nitrate are not used as terminal electron acceptors. Thermophilic. The optimal temperature for growth is 60°C. Neutrophilic. The optimal pH for growth is 6.9. NaCl and MgCl
2
are necessary for growth. Media containing a reductant are necessary for cultivation. Vitamins are not required. The major menaquinone, the pattern of polar lipids, and the cellular fatty acid profiles are not known. The genus currently accommodates a single species
Thermodesulforhabdus norvegica
. The type strain of the genus was isolated from hot North Sea oil field water from a Norwegian oil platform.
Thermodesulforhabdus
species occur in hot North Sea oil field water and hydrothermal vents.

DNA G + C content (mol%)
: 51 (LC), 49.7 (genome).

Type species
:
Thermodesulforhabdus norvegica
Beeder, Torsvik and Lien 1996, 625
VP
(Effective publication:
Thermodesulforhabdus norvegicus
Beeder, Torsvik and Lien 1995, 335).
C
ompostibacillus
Authors: Yu Zhen , Yang Guiqin , Zhou Shungui 
Published: June 2019

Abstract

Com.pos.ti.ba.cil'lus. N.L. neut. n.
compostum
, compost; L. masc. n.
bacillus
, a small rod; N.L. masc. n.
Compostibacillus
, a rod‐shaped bacterium from compost.

Firmicutes / Bacilli / Bacillales / Bacillaceae / Compostibacillus

Cells are Gram‐positive‐staining rods, 0.6–0.8‐µm wide and 1.6–3.0‐µm long, occurring singly or in irregular clusters. Cylindrical or ellipsoidal endospores lie in terminal positions in swollen sporangia. Motile by peritrichous flagella. Facultatively anaerobic, moderately thermophilic, and slightly alkaliphilic. Positive for oxidase and catalase. Colonies are yellowish brown, smooth, and round with entire margins.
Compostibacillus
can utilize a wide range of carbohydrates this is a curious way of stating that ammonium ions are used as nitrogen source. Nitrate is not reduced. Gelatin and casein are hydrolyzed. Contains meso‐diaminopimelic acid in cell‐wall peptidoglycan. The major cellular fatty acids are iso‐C
15:0
, iso‐C
17:0
, anteiso‐C
17:0
, and anteiso‐C
15:0
. The main menaquinone type is MK‐7. The predominant polar lipids are diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine. Belongs to the family
Bacillaceae
. Typically found in composts.

DNA G + C content (mol%)
: 43.2–43.7 (HPLC).

Type species
:
Compostibacillus humi
Yu, Wen, Yang, Liu and Zhou 2015, 351
VP
.
A
cidipila
Authors: Hiraishi Akira 
Published: June 2019

Abstract

A.ci.di.pi'la. N.L.
acidum
(from L. adj.
acidus
, sour), an acid; L. fem. n.
pila
, a ball or sphere; N.L. fem. n.
Acidipila
, acid sphere.

Acidobacteria / Acidobacteriia / Acidobacteriales / Acidobacteriaceae / Acidipila

The genus
Acidipila
accommodates the species of the strictly aerobic chemoorganotrophic bacteria that grow optimally under acidic conditions. Cells are Gram‐stain‐negative cocci and coccobacilli multiplying by binary fission. Nonmotile and capsulated. Colonies are mucous and vary in color from white–beige to pale pink. Growth is inhibited by ≥1.0% (w/w) NaCl. Oxidase and catalase are negative. Carbohydrates including
d
‐glucose are favored carbon and energy sources for growth. The major respiratory quinone is MK‐8. The cellular fatty acids are characterized by the presence of methyl‐branched‐chain acids with iso‐C
15
:0
predominating and considerable amounts of saturated and unsaturated straight‐chain acids. The members of the genus were isolated from acid mine drainage, acid soil, and forest soil.

DNA G + C content (mol%)
: 56.3–59.5 (HPLC).

Type species
:
Acidipila rosea
Okamura, Kawai, Yamada and Hiraishi 2015b, 2777
VP
(Effective publication: Okamura, Kawai, Yamada and Hiraishi 2011, 141).
L
uteitalea
Authors: Huber Katharina J. , Overmann Jörg 
Published: June 2019

Abstract

Lu.te.i.ta'le.a. L. fem. adj.
lutea
golden yellow; L. fem. n.
talea
a slender staff; N.L. fem. n.
Luteitalea
a yellow‐pigmented, rod‐shaped bacterium.

Acidobacteria / ‘Vicinamibacteria’ / ‘Vicinamibacterales’ / Vicinamibacteraceae / Luteitalea

The single known representative of the genus
Luteitalea
is an aerobic, chemoorganotrophic, and psychrotolerant mesophile capable of growing over a broad temperature and pH range. Cells of the type strain stain Gram‐negative, are nonmotile, divide by binary fission, and neither form spores nor capsules. Small dark yellow colonies are formed on agar plates. Cytochrome
c‐
oxidase activity tests negative, whereas catalase activity is observed.
Luteitalea
grows on several sugars and complex proteinaceous compounds. NaCl concentrations of 0.25% allow optimum growth of the cells; concentrations up to 1% (w/v) are tolerated. Resistant to penicillin G, oxacillin, ampicillin, ticarcillin, mezlocillin, cefalotin, cefazolin, cefotaxime, aztreonam, imipenem, chloramphenicol, erythromycin, ofloxacin, norfloxacin, pipemidic acid, nitrofurantoin, neomycin, fosfomycin, moxifloxacin, linezolid, and nystatin. Iso‐C
15:0
, C
16:1
ω9
c
, C
18:1
ω9
c
, and iso‐C
17:1
ω9
c
are the major fatty acids.
Iso
‐diabolic acid is present, and traces of 6‐methyl
iso
‐diabolic are detectable. The major polar lipids are diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, phosphatidylglycerol, and two unknown phospholipids. MK‐8 represents the major quinone. The type strain of the genus
Luteitalea
was isolated from a mown pasture grassland soil in Germany.

DNA G
+
C content (mol%)
: 64.7 (HPLC).

Type species
:
Luteitalea pratensis
Vieira, Luckner, Wanner and Overmann 2017, 1411
VP
.
C
oprothermobacterales
Authors: Pavan María Elisa , Pavan Esteban E. , Kämpfer Peter , Pettinari María Julia , López Nancy I. 
Published: June 2019

Abstract

Co.pro.ther.mo.bac.te.ra'les. N.L. masc. n.
Coprothermobacter
type genus of the order; ‐
ales
ending to denote an order; N.L. fem. pl. n.
Coprothermobacterales
the order of the genus
Coprothermobacter
.

Coprothermobacterota / Coprothermobacteria / Coprothermobacterales

The order
Coprothermobacterales
belonging to the phylum
Coprothermobacterota
constitutes one of the primary lines of descent in the bacterial domain. The order is currently represented by a single family and genus. Nonmotile rods. Stains Gram‐negative. Non‐spore‐forming. Strictly anaerobic, thermophilic. Chemoorganotrophs. Proteolytic fermenters that produce acetic acid, H
2
, and CO
2
as the main end products. Able to reduce thiosulfate but not sulfate to sulfide.

Type genus
:
Coprothermobacter
Rainey and Stackebrandt 1993, 858
VP
.
Comparison of machine learning models for seizure prediction in hospitalized patients
Authors: Struck Aaron F. , Rodriguez‐Ruiz Andres A. , Osman Gamaledin , Gilmore Emily J. , Haider Hiba A. , Dhakar Monica B. , Schrettner Matthew , Lee Jong W. , Gaspard Nicolas , Hirsch Lawrence J. , Westover M. Brandon ,   Critical Care EEG Monitoring Research Consortium (CCERMRC)
Published: June 2019

AbstractObjectiveTo compare machine learning methods for predicting inpatient seizures risk and determine the feasibility of 1‐h screening EEG to identify low‐risk patients (<5% seizures risk in 48 h).MethodsThe Critical Care EEG Monitoring Research Consortium (CCEMRC) multicenter database contains 7716 continuous EEGs (cEEG). Neural networks (NN), elastic net logistic regression (EN), and sparse linear integer model (RiskSLIM) were trained to predict seizures. RiskSLIM was used previously to generate 2HELPS2B model of seizure predictions. Data were divided into training (60% for model fitting) and evaluation (40% for model evaluation) cohorts. Performance was measured using area under the receiver operating curve (AUC), mean risk calibration (CAL), and negative predictive value (NPV). A secondary analysis was performed using Monte Carlo simulation (MCS) to normalize all EEG recordings to 48 h and use only the first hour of EEG as a “screening EEG” to generate predictions.ResultsRiskSLIM recreated the 2HELPS2B model. All models had comparable AUC: evaluation cohort (NN: 0.85, EN: 0.84, 2HELPS2B: 0.83) and MCS (NN: 0.82, EN; 0.82, 2HELPS2B: 0.81) and NPV (absence of seizures in the group that the models predicted to be low risk): evaluation cohort (NN: 97%, EN: 97%, 2HELPS2B: 97%) and MCS (NN: 97%, EN: 99%, 2HELPS2B: 97%). 2HELPS2B model was able to identify the largest proportion of low‐risk patients.InterpretationFor seizure risk stratification of hospitalized patients, the RiskSLIM generated 2HELPS2B model compares favorably to the complex NN and EN generated models. 2HELPS2B is able to accurately and quickly identify low‐risk patients with only a 1‐h screening EEG.
Constructing Gene‐Enhanced Tissue Engineering for Regeneration and Repair of Osteochondral Defects
Authors: Chen Taijun , Cao Fei , Wu Xin , Peng Wenzhen , Zhi Wei , Weng Jie , Zhang Xingdong , Wang Jianxin 
Published: June 2019

AbstractIn situ sustained release of endogenous growth factors from cells is a challenge for repair and regeneration of tissue. Although recombinant adenovirus vectors are an effective delivery system that can prolong the release of growth factors and is very suitable for the therapy of growth factors, these recombinant adenovirus vectors that are widely used at present have low safety and stability in terms of long‐term expression. In this study, the above problems are solved by knocking out both E1 and E3 genes at the same time and directly inserting the gene fragments encoding target proteins after the inverted terminal repeats. Finally, the combination of gene therapy with tissue engineering in regeneration and repair of full‐thickness defects of osteochondral tissue are applied as an example. The results show that this strategy can achieve complete repair of articular osteochondral defects and recovery of their function, and meanwhile solve the problems of low safety and expression instability of recombinant adenovirus vectors. This method provides a bright prospect for the application of gene enhanced tissue engineering in the regeneration and repair of joint tissue, and also provides a reference for the repair and regeneration of other tissues.
Recent Advances in 1D Organic Solid‐State Lasers
Authors: Wei Guo‐Qing , Wang Xue‐Dong , Liao Liang‐Sheng 
Published: June 2019

AbstractOrganic solid‐state lasers (OSSLs) based on 1D organic crystals have attracted broad attention from researchers owing to the importance of potential applications in optoelectronic fields. 1D OSSLs can be fabricated from various organic molecules under the function of weak intermolecular interactions via numerous methods. The lasing performance of 1D OSSLs can be tuned toward novel optoelectronic applications by modifying the primary 1D morphology through constructing heterogeneous 1D architectures. Here, the recent advances of 1D OSSLs from the aspects of materials, fabrication methods, as well as some enlightening examples of 1D OSSLs with advanced laser performances are reviewed, and an outlook is given providing inspiration for the future development of 1D OSSLs with desired performances.