bluuebunny/crossref_metadata_2025_split huggingface dataset:
Carbamoylated erythropoietin modulates cognitive outcomes of social defeat and differentially regulates gene expression in the dorsal and ventral hippocampus
Authors: Sathyanesan Monica , Watt Michael J , Haiar Jacob M , Scholl Jamie L , Davies Shaydel R , Paulsen Riley T , Wiederin Jayme , Ciborowski Pawel , Newton Samuel S 
Published: June 2018

AbstractCognitive deficits are widespread in psychiatric disorders and frequently as debilitating as the affective component. Widely prescribed antidepressants for treating depressive disorders have limited efficacy in normalizing cognitive function. Erythropoietin (Epo) has been shown to improve cognitive function in schizophrenia and treatment resistant depressed patients. However, the potent elevation of red blood cell counts by Epo can cause hematological complications in non-anemic patients. We investigated a chemically engineered, posttranslational modification of Epo, carbamoylation, which renders it non-erythropoietic. We conducted mass-spectrometry-based peptide mapping of carbamoylated Epo (Cepo) and tested its ability to improve cognitive function after social defeat stress. Gene expression analysis in discrete brain regions was performed to obtain mechanistic insight of Cepo action. Cepo reversed stress-induced spatial working memory deficits while affecting long-term (24 h) novel object recognition in these rats. Contextual fear conditioning following defeat was enhanced by Cepo, but attenuated in controls. However, Cepo improved fear extinction in all rats compared to vehicle treatment. Cepo induced differential gene expression of BDNF, VGF, Arc, TH. and neuritin in the mPFC and discrete hippocampal subfields, with strongest induction in the dorsal hippocampus. Analysis of gene–brain region–behavior interactions showed that Cepo-induced neurotrophic mechanisms influence cognitive function. Carbamoylated erythropoietin can be developed as a therapeutic neurotrophic agent to treat cognitive dysfunction in neuropsychiatric diseases. Due to its distinct mechanism of action, it is unlikely to cross react with the activity of currently prescribed small molecule drugs and can be used as an add-on biologic drug.
Biallelic mutations of EGFR in a compound heterozygous state cause ectodermal dysplasia with severe skin defects and gastrointestinal dysfunction
Authors: Hayashi Shion , Yokoi Takayuki , Hatano Chihiro , Enomoto Yumi , Tsurusaki Yoshinori , Naruto Takuya , Kobayashi Masahisa , Ida Hiroyuki , Kurosawa Kenji 
Published: June 2018

AbstractEpidermal growth factor receptor (EGFR), a receptor that recognizes epidermal growth factor, is a very important regulator of cell proliferation and differentiation. To date, three cases of severe ectodermal dysplasia were reported to be caused by an inherited germline homozygous loss-of-function missense mutation of EGFR. This is the first report of a patient with biallelic compound heterozygous mutations in EGFR.
Inducing Kondo screening of vacancy magnetic moments in graphene with gating and local curvature
Authors: Jiang Yuhang , Lo Po-Wei , May Daniel , Li Guohong , Guo Guang-Yu , Anders Frithjof B. , Taniguchi Takashi , Watanabe Kenji , Mao Jinhai , Andrei Eva Y. 
Published: June 2018

AbstractIn normal metals the magnetic moment of impurity-spins disappears below a characteristic Kondo temperature which marks the formation of a cloud of conduction-band electrons that screen the local-moment. In contrast, moments embedded in insulators remain unscreened at all temperatures. What then is the fate of magnetic-moments in intermediate, pseudogap systems, such as graphene? Theory predicts that coupling to the conduction-band electrons will drive a quantum phase transition between a local-moment phase and a Kondo-screened phase. However, attempts to experimentally confirm this prediction and its intriguing consequences, such as electrostatically tunable magnetic-moments, have been elusive. Here we report the observation of Kondo-screening and the quantum phase-transition between screened and unscreened phases of vacancy magnetic moments in graphene. Using scanning tunneling spectroscopy and numerical renormalization-group calculations we show that this transition enables to control the screening of local moments by tuning the gate voltage and the local curvature of the graphene membrane.
Multi-material Additive Manufacturing of Metamaterials with Giant, Tailorable Negative Poisson’s Ratios
Authors: Chen Da , Zheng Xiaoyu 
Published: June 2018

AbstractNature has evolved with a recurring strategy to achieve unusual mechanical properties through coupling variable elastic moduli from a few GPa to below KPa within a single tissue. The ability to produce multi-material, three-dimensional (3D) micro-architectures with high fidelity incorporating dissimilar components has been a major challenge in man-made materials. Here we show multi-modulus metamaterials whose architectural element is comprised of encoded elasticity ranging from rigid to soft. We found that, in contrast to ordinary architected materials whose negative Poisson’s ratio is dictated by their geometry, these type of metamaterials are capable of displaying Poisson’s ratios from extreme negative to zero, independent of their 3D micro-architecture. The resulting low density metamaterials is capable of achieving functionally graded, distributed strain amplification capabilities within the metamaterial with uniform micro-architectures. Simultaneous tuning of Poisson’s ratio and moduli within the 3D multi-materials could open up a broad array of material by design applications ranging from flexible armor, artificial muscles, to actuators and bio-mimetic materials.
Deep Transcriptomic Analysis of Black Rockfish (Sebastes schlegelii) Provides New Insights on Responses to Acute Temperature Stress
Authors: Lyu Likang , Wen Haishen , Li Yun , Li Jifang , Zhao Ji , Zhang Simin , Song Min , Wang Xiaojie 
Published: June 2018

AbstractIn the present study, we conducted an RNA-Seq analysis to characterize the genes and pathways involved in acute thermal and cold stress responses in the liver of black rockfish, a viviparous teleost that has the ability to cope with a wide range of temperature changes. A total of 584 annotated differentially expressed genes (DEGs) were identified in all three comparisons (HT vs NT, HT vs LT and LT vs NT). Based on an enrichment analysis, DEGs with a potential role in stress accommodation were classified into several categories, including protein folding, metabolism, immune response, signal transduction, molecule transport, membrane, and cell proliferation/apoptosis. Considering that thermal stress has a greater effect than cold stress in black rockfish, 24 shared DEGs in the intersection of the HT vs LT and HT vs NT groups were enriched in 2 oxidation-related gene ontology (GO) terms. Nine important heat-stress-reducing pathways were significantly identified and classified into 3 classes: immune and infectious diseases, organismal immune system and endocrine system. Eight DEGs (early growth response protein 1, bile salt export pump, abcb11, hsp70a, rtp3, 1,25-dihydroxyvitamin d(3) 24-hydroxylase, apoa4, transcription factor jun-b-like and an uncharacterized gene) were observed among all three comparisons, strongly implying their potentially important roles in temperature stress responses.
A computational model of excitation and contraction in uterine myocytes from the pregnant rat
Authors: Testrow Craig P. , Holden Arun V. , Shmygol Anatoly , Zhang Henggui 
Published: June 2018

AbstractAberrant uterine myometrial activities in humans are major health issues. However, the cellular and tissue mechanism(s) that maintain the uterine myometrium at rest during gestation, and that initiate and maintain long-lasting uterine contractions during delivery are incompletely understood. In this study we construct a computational model for describing the electrical activity (simple and complex action potentials), intracellular calcium dynamics and mechanical contractions of isolated uterine myocytes from the pregnant rat. The model reproduces variant types of action potentials – from spikes with a smooth plateau, to spikes with an oscillatory plateau, to bursts of spikes – that are seen during late gestation under different physiological conditions. The effects of the hormones oestradiol (via reductions in calcium and potassium selective channel conductance), oxytocin (via an increase in intracellular calcium release) and the tocolytic nifedipine (via a block of L-type calcium channels currents) on action potentials and contractions are also reproduced, which quantitatively match to experimental data. All of these results validated the cell model development. In conclusion, the developed model provides a computational platform for further investigations of the ionic mechanism underlying the genesis and control of electrical and mechanical activities in the rat uterine myocytes.
Relativistic Doppler-boosted γ-rays in High Fields
Authors: Capdessus Remi , King Martin , Del Sorbo Dario , Duff Matthew , Ridgers Christopher P. , McKenna Paul 
Published: June 2018

AbstractThe relativistic Doppler effect is one of the most famous implications of the principles of special relativity and is intrinsic to moving radiation sources, relativistic optics and many astrophysical phenomena. It occurs in the case of a plasma sail accelerated to relativistic velocities by an external driver, such as an ultra-intense laser pulse. Here we show that the relativistic Doppler effect on the high energy synchrotron photon emission (~10 MeV), strongly depends on two intrinsic properties of the plasma (charge state and ion mass) and the transverse extent of the driver. When the moving plasma becomes relativistically transparent to the driver, we show that the γ-ray emission is Doppler-boosted and the angular emission decreases; optimal for the highest charge-to-mass ratio ion species (i.e. a hydrogen plasma). This provides new fundamental insight into the generation of γ-rays in extreme conditions and informs related experiments using multi-petawatt laser facilities.
The effects of printing orientation on the electrochemical behaviour of 3D printed acrylonitrile butadiene styrene (ABS)/carbon black electrodes
Authors: Bin Hamzah Hairul Hisham , Keattch Oliver , Covill Derek , Patel Bhavik Anil 
Published: June 2018

AbstractAdditive manufacturing also known as 3D printing is being utilised in electrochemistry to reproducibly develop complex geometries with conductive properties. In this study, we explored if the electrochemical behavior of 3D printed acrylonitrile butadiene styrene (ABS)/carbon black electrodes was influenced by printing direction. The electrodes were printed in both horizontal and vertical directions. The horizsontal direction resulted in a smooth surface (HPSS electrode) and a comparatively rougher surface (HPRS electrode) surface. Electrodes were characterized using cyclic voltammetry, electrochemical impedance spectroscopy and chronoamperometry. For various redox couples, the vertical printed (VP) electrode showed enhanced current response when compared the two electrode surfaces generated by horizontal print direction. No differences in the capacitive response was observed, indicating that the conductive surface area of all types of electrodes were identical. The VP electrode had reduced charge transfer resistance and uncompensated solution resistance when compared to the HPSS and HPRS electrodes. Overall, electrodes printed in a vertical direction provide enhanced electrochemical performance and our study indicates that print orientation is a key factor that can be used to enhance sensor performance.
Corrosion inhibition of mild steel in sulfuric acid solution by loquat (Eriobotrya japonica Lindl.) leaves extract
Authors: Zheng Xingwen , Gong Min , Li Qiang , Guo Lei 
Published: June 2018

AbstractThe inhibition performance and mechanism of loquat leaves extract (LLE) for the corrosion of mild steel in 0.5 M H2SO4 were investigated using weight loss method, electrochemical measurements and scanning electron microscope (SEM). The results revealed that LLE acted as a modest cathodic inhibitor, its inhibition efficiency increased with the concentration of LLE and reached a maximum value of 96% at the 100% V/V concentration, but decreased with incremental temperature. Besides, it was found that the adsorption of LLE on steel surface obeyed Langmuir adsorption isotherm, and then the thermodynamic and kinetic parameters were further determined accordingly. Furthermore, LLE was preliminarily separated by pH-gradient sedimentation and the synergistic inhibition between the isolates was investigated.
Study of the absorption coefficient of graphene-polymer composites
Authors: Zeranska-Chudek K. , Lapinska A. , Wroblewska A. , Judek J. , Duzynska A. , Pawlowski M. , Witowski A. M. , Zdrojek M. 
Published: June 2018

AbstractIn this work, we have prepared a series of polydimethylsiloxane (PDMS) composites containing various graphene flakes loadings (0.02–2 wt%), and their broadband optical properties are being investigated. We demonstrate the tunability and evolution of transmittance and reflection spectra of the composites in a wide spectral range (0.4–200 μm) as a function of graphene content. Using these data we derive the broadband wavelength-dependent absorption coefficient (α) values. Our results show that α is roughly constant in the visible and IR ranges, and, surprisingly, is approximately one order of magnitude lower in the terahertz regime, suggesting different terahertz radiation scattering mechanism in our composite. Our material could be useful for applications in optical communication, sensing or ultrafast photonics.
The relationship between reinforcement and explicit control during visuomotor adaptation
Authors: Codol Olivier , Holland Peter J. , Galea Joseph M. 
Published: June 2018

AbstractThe motor system’s ability to adapt to environmental changes is essential for maintaining accurate movements. Such adaptation recruits several distinct systems: cerebellar sensory-prediction error learning, success-based reinforcement, and explicit control. Although much work has focused on the relationship between cerebellar learning and explicit control, there is little research regarding how reinforcement and explicit control interact. To address this, participants first learnt a 20° visuomotor displacement. After reaching asymptotic performance, binary, hit-or-miss feedback (BF) was introduced either with or without visual feedback, the latter promoting reinforcement. Subsequently, retention was assessed using no-feedback trials, with half of the participants in each group being instructed to stop aiming off target. Although BF led to an increase in retention of the visuomotor displacement, instructing participants to stop re-aiming nullified this effect, suggesting explicit control is critical to BF-based reinforcement. In a second experiment, we prevented the expression or development of explicit control during BF performance, by either constraining participants to a short preparation time (expression) or by introducing the displacement gradually (development). Both manipulations strongly impaired BF performance, suggesting reinforcement requires both recruitment and expression of an explicit component. These results emphasise the pivotal role explicit control plays in reinforcement-based motor learning.
Resurrecting Darwin’s Niata - anatomical, biomechanical, genetic, and morphometric studies of morphological novelty in cattle
Authors: Veitschegger Kristof , Wilson Laura A. B. , Nussberger Beatrice , Camenisch Glauco , Keller Lukas F. , Wroe Stephen , Sánchez-Villagra Marcelo R. 
Published: June 2018

AbstractThe Niata was a cattle variety from South America that figured prominently in writings on evolution by Charles Darwin. Its shortened head and other aspects of its unusual morphology have been subject of unsettled discussions since Darwin’s time. Here, we examine the anatomy, cranial shape, skull biomechanics, and population genetics of the Niata. Our results show that the Niata was a viable variety of cattle and exhibited anatomical differences to known chondrodysplastic forms. In cranial shape and genetic analysis, the Niata occupies an isolated position clearly separated from other cattle. Computational biomechanical model comparison reveals that the shorter face of the Niata resulted in a restricted distribution and lower magnitude of stress during biting. Morphological and genetic data illustrate the acquisition of novelty in the domestication process and confirm the distinct nature of the Niata cattle, validating Darwin’s view that it was a true breed.
Real-time multiplex PCR for simultaneous detection of multiple species from environmental DNA: an application on two Japanese medaka species
Authors: Tsuji Satsuki , Iguchi Yuka , Shibata Naoki , Teramura Iori , Kitagawa Tadao , Yamanaka Hiroki 
Published: June 2018

AbstractInformation about species distribution is crucial to ecological studies. Environmental DNA (eDNA) analysis has recently been used to estimate the distribution of aquatic organisms. Several analytical methods including metabarcoding and species-specific PCR are being used for eDNA analysis. However, when only a few species are targeted, metabarcoding is not cost-effective because of the wasted consumption of read due to amplification of non-target species DNA. On the other hand, species-specific PCR requires tests to be repeated multiple times resulting in consuming more DNA templates, and experimental consumables. Here we propose a methodological framework for simultaneously detecting a few species using real-time multiplex PCR. We developed the species-specific primer-probe sets for two species of Japanese medaka (Oryzias latipes and o. sakaizumii), and we used them in the real-time multiplex PCR. In aquarium experiment, even when the species abundances were biased, both species were simultaneously detected in all samples. In a field survey, eDNA analysis and capture survey produced consistent results in all sampling sites, including sites with low fish densities. eDNA analysis using real-time multiplex PCR can be easily applied to other aquatic organisms, enabling a more cost-effective distribution survey of multiple target organisms.
Comprehensive metabolic and transcriptomic profiling of various tissues provide insights for saponin biosynthesis in the medicinally important Asparagus racemosus
Authors: Srivastava Prabhakar Lal , Shukla Anurag , Kalunke Raviraj M. 
Published: June 2018

AbstractAsparagus racemosus (Shatavari), belongs to the family Asparagaceae and is known as a “curer of hundred diseases” since ancient time. This plant has been exploited as a food supplement to enhance immune system and regarded as a highly valued medicinal plant in Ayurvedic medicine system for the treatment of various ailments such as gastric ulcers, dyspepsia, cardiovascular diseases, neurodegenerative diseases, cancer, as a galactogogue and against several other diseases. In depth metabolic fingerprinting of various parts of the plant led to the identification of 13 monoterpenoids exclusively present in roots. LC-MS profiling led to the identification of a significant number of steroidal saponins (33). However, we have also identified 16 triterpene saponins for the first time in A. racemosus. In order to understand the molecular basis of biosynthesis of major components, transcriptome sequencing from three different tissues (root, leaf and fruit) was carried out. Functional annotation of A. racemosus transcriptome resulted in the identification of 153 transcripts involved in steroidal saponin biosynthesis, 45 transcripts in triterpene saponin biosynthesis, 44 transcripts in monoterpenoid biosynthesis and 79 transcripts in flavonoid biosynthesis. These findings will pave the way for better understanding of the molecular basis of steroidal saponin, triterpene saponin, monoterpenoids and flavonoid biosynthesis in A. racemosus.
Hydroclimatic changes of Lake Bosten in Northwest China during the last decades
Authors: Yao Junqiang , Chen Yaning , Zhao Yong , Yu Xiaojing 
Published: June 2018

AbstractBosten Lake, the largest inland freshwater lake in China, has experienced drastic change over the past five decades. Based on the lake water balance model and climate elasticity method, we identify annual changes in the lake’s water components during 1961–2016 and investigate its water balance. We find a complex pattern in the lake’s water: a decrease (1961–1987), a rapid increase (1988–2002), a drastic decrease (2003–2012), and a recent drastic increase (2013–2016). We also estimated the lake’s water balance, finding that the drastic changes are caused by a climate-driven regime shift coupled with human disturbance. The changes in the lake accelerated after 1987, which may have been driven by regional climate wetting. During 2003 to 2012, implementation of the ecological water conveyance project (EWCP) significantly increased the lake’s outflow, while a decreased precipitation led to an increased drought frequency. The glacier retreating trend accelerated by warming, and caused large variations in the observed lake’s changes in recent years. Furthermore, wastewater emissions may give rise to water degradation, human activity is completely changing the natural water cycle system in the Bosten Lake. Indeed, the future of Bosten Lake is largely dependent on mankind.
Biological Impact of Silicon Nitride for Orthopaedic Applications: Role of Particle Size, Surface Composition and Donor Variation
Authors: Lal Saurabh , Caseley Emily A. , Hall Richard M. , Tipper Joanne L. 
Published: June 2018

AbstractThe adverse biological impact of orthopaedic wear debris currently limits the long-term safety of human joint replacement devices. We investigated the role of particle size, surface composition and donor variation in influencing the biological impact of silicon nitride as a bioceramic for orthopaedic applications. Silicon nitride particles were compared to the other commonly used orthopaedic biomaterials (e.g. cobalt-chromium and Ti-6Al-4V alloys). A novel biological evaluation platform was developed to simultaneously evaluate cytotoxicity, inflammatory cytokine release, oxidative stress, and genotoxicity potential of particles using peripheral blood mononuclear cells (PBMNCs) from individual human donors. Irrespective of the particle size, silicon nitride did not cause any adverse responses whereas cobalt-chromium wear particles caused donor-dependent cytotoxicity, TNF-α cytokine release, oxidative stress, and DNA damage in PBMNCs after 24 h. Despite being similar in size and morphology, silicon dioxide nanoparticles caused the release of significantly higher levels of TNF-α compared to silicon nitride nanoparticles, suggesting that surface composition influences the inflammatory response in PBMNCs. Ti-6Al-4V wear particles also released significantly elevated levels of TNF-α cytokine in one of the donors. This study demonstrated that silicon nitride is an attractive orthopaedic biomaterial due to its minimal biological impact on human PBMNCs.