bluuebunny/crossref_metadata_2025_split huggingface dataset:
Is the SMARTLock Hybrid Maxillomandibular Fixation System Comparable to Intermaxillary Fixation Screws in Closed Reduction of Condylar Fractures?
Authors: Roeder Rosiane Alfinito , Guo Lifei , Lim Alan A. 
Published: May 2018

Abstract
Condylar fractures account for one third of all mandibular fractures. Despite being highly prevalent, treatment of these fractures remains controversial because of the sequelae of inadequate closed reduction and the risks associated with open repair. Multiple studies attempt to compare closed reduction with maxillomandibular fixation (MMF), open reduction with internal fixation, and endoscopic reduction with internal fixation. In our practice, we favor closed reduction with MMF except in cases of significantly displaced subcondylar fractures. To decrease operative MMF time, we moved away from traditional arch bars in favor of intermaxillary fixation screws (IMF screws). However, since the advent of the Stryker SMARTLock Hybrid Maxillomandibular Fixation System (Hybrid), we now use this system to maximize the advantages of having an arch bar, with its flexibility of elastic placement and ability to serve as tension band, in addition to the speed and simplicity of application similarly afforded by the IMF screws. The Hybrid system is shown to be cost effective compared with arch bars in a previous study. This is attributed to decreased operating room time. There are no studies comparing its outcomes and cost with IMF screws. In this article, we examine a series of patients treated with closed reduction using either IMF screws or the Stryker SMARTLock Hybrid Maxillomandibular Fixation System. We found similar result in patient outcomes and operative time, but increase cost with the Hybrid system.
Remote Ischemic Conditioning in a Model of Severe Renal Ischemia–Reperfusion Injury
Authors: Behaghel Vianney , Tamareille Sophie , Rabant Marion , Mirebeau-Prunier Delphine , Bière Loïc , Macchi Laurent , Prunier Fabrice 
Published: May 2018

ABSTRACT
Ischemia–reperfusion (I/R) injury is a leading cause of acute renal dysfunction. Remote ischemic conditioning (rIC) is known to protect organs exposed to I/R. We sought to investigate whether rIC would influence renal function recovery in a severe renal I/R injury rat model. Rats were randomly assigned to four experimental groups following median laparotomy and right nephrectomy: Sham (n = 6); 30-min left renal ischemia (RI) only (n = 20); RI + rIC (n = 20) (four 5-min cycles of limb ischemia interspersed with 5-min limb reperfusion during RI); and RI + erythropoietin pretreatment (EPO) (n = 20). Renal function was evaluated by assessing blood urea nitrogen (BUN) and serum creatinine (Cr) levels before surgery and after 1 day of reperfusion. All animals were monitored for 7 days for survival analysis. BUN and Cr baseline levels did not significantly differ between groups. At day 1, BUN and Cr were significantly higher than baseline values in all groups. BUN and Cr levels did not significantly differ at day 1 between RI and RI + rIC (P = 0.68). Conversely, EPO pretreatment injected 60 min before RI was associated with lower BUN and Cr levels compared with RI (P < 0.001 and P = 0.003, respectively) and RI + rIC (P < 0.001 and P = 0.001, respectively). In addition, 7-day survival rates were significantly higher in the Sham group (100%) compared with RI (50%; P = 0.039 vs. Sham) and RI + rIC (45%; P = 0.026 vs. Sham). Conversely, survival rate did not significantly differ between the Sham and RI + EPO groups (70%, P = 0.15). In conclusion, rIC affected neither acute renal dysfunction nor early mortality in a severe I/R renal injury rat model, contrary to EPO pretreatment.
Analysis of HIV-1 latent reservoir and rebound viruses in a clinical trial of anti-HIV-1 antibody 3BNC117
Authors: Cohen Yehuda Z. , Lorenzi Julio C. C. , Krassnig Lisa , Barton John P. , Burke Leah , Pai Joy , Lu Ching-Lan , Mendoza Pilar , Oliveira Thiago Y. , Sleckman Christopher , Millard Katrina , Butler Allison L. , Dizon Juan P. , Belblidia Shiraz A. , Witmer-Pack Maggi , Shimeliovich Irina , Gulick Roy M. , Seaman Michael S. , Jankovic Mila , Caskey Marina , Nussenzweig Michel C. 
Published: May 2018

AbstractA clinical trial was performed to evaluate 3BNC117, a potent anti_HIV_1 antibody, in infected individuals during suppressive antiretroviral therapy (ART) and subsequent analytical treatment interruption (ATI). The circulating reservoir was evaluated by quantitative and qualitative outgrowth assay (Q2VOA) at entry and after 6 months, prior to ATI. Although there were no significant quantitative changes in the size of the reservoir, the composition of circulating reservoir clones varied over the 6_month period before treatment interruption in a manner that did not correlate with antibody sensitivity. The neutralization profile obtained from the reservoir by Q2VOA was predictive of time to rebound after ATI, and thus of antibody efficacy. Although 3BNC117 binding site amino acid variants found in rebound viruses pre_existed in the latent reservoir, only 3 of 217 rebound viruses were identical to 868 latent viruses. Instead many of the rebound viruses appeared to be recombinants, even in individuals with resistant reservoir viruses. By incorporating the possibility of recombination, 63% of the rebound viruses could have derived from the observed latent reservoir. In conclusion, viruses emerging during ATI in individuals treated with 3BNC117 are not the dominant species found in the circulating reservoir, but instead appear to represent recombinants.SummaryIn the setting of a clinical trial evaluating the anti_HIV_1 antibody 3BNC117, Cohen et al. demonstrate that rebound viruses that emerge following interruption of antiretroviral therapy are distinct from circulating latent viruses. However, rebound viruses often appear to be recombinants between isolated latent viruses.
Spousal Concordance in Telomere Length: New Evidence from Older Adults in the US
Authors: Fletcher Jason M. 
Published: May 2018

AbstractTelomere length (TL) has been associated with a range of aging outcomes as well as mortality. Recent research has shown both high heritability (∼70 %) of TL as well as moderate spousal similarity (r∼.3) using European datasets. This paper explores the level of spousal concordance in telomere length in the Health and Retirement Study, a national sample of adults in the US. The results both show that the spousal similarity in TL is lower in the US and also varies by the length of time spouses have been married as well as the educational attainments of husbands. These findings suggest the possibility of both assortative mating patterns related to telomere length as well as likelihood of shared environmental factors that cause similarity in TL in people who are socially connected.
Defining p53 pioneering capabilities with competitive nucleosome binding assays
Authors: Yu Xinyang , Buck Michael J. 
Published: May 2018

AbstractAccurate gene expression requires the targeting of transcription factors (TFs) to regulatory sequences often occluded within nucleosomes. The ability to target a transcription factor binding site (TFBS) within a nucleosome has been the defining characteristic for a special class of TFs known as pioneer factors. Recent studies suggest p53 functions as a pioneer factor that can target its TFBS within nucleosomes, but it remains unclear how p53 binds to nucleosomal DNA. To comprehensively examine p53 nucleosome binding we competitively bound p53 to multiple in vitro formed nucleosomes containing a high or low-affinity p53 TFBS located at differing translational and rotational positions within the nucleosome. Stable p53-nucleosome complexes were isolated and quantified using next generation sequencing. Our results demonstrate p53 binding is limited to nucleosome edges with significant binding inhibition occurring within 50-bp of the nucleosome dyad. Binding site affinity only affects p53 binding for TFBS located outside the nucleosome core at the same nucleosomal positions. Furthermore, p53 has strong non-specific nucleosome binding facilitating its interaction with chromatin. Our in vitro findings were confirmed by examining p53 induced binding in a cell line model, showing induced binding at nucleosome edges flanked by a nucleosome free region. Overall, our results suggest that the pioneering capabilities of p53 are driven by non-specific nucleosome binding with specific binding at nucleosome edges.
Effect of fluoxetine on adult amblyopia: a placebo-controlled study combining neuroplasticity-enhancing pharmacological intervention and perceptual training
Authors: Huttunen Henri J. , Palva J. Matias , Lindberg Laura , Palva Satu , Saarela Ville , Karvonen Elina , Latvala Marja-Leena , Liinamaa Johanna , Booms Sigrid , Castrén Eero , Uusitalo Hannu 
Published: May 2018

ABSTRACTAmblyopia is a common visual disorder that is treatable in childhood. However, therapies have limited efficacy in adult patients with amblyopia. Fluoxetine can reinstate early-life critical period-like neuronal plasticity and has been used to recover functional vision in adult rats with amblyopia. This phase 2, randomized, double-blind (fluoxetine vs. placebo), multicenter clinical trial examined whether or not fluoxetine can improve visual acuity in amblyopic adults. This interventional trial included 42 participants diagnosed with moderate to severe amblyopia. Subjects were randomized to receive either 20 mg fluoxetine (n=22) or placebo (n=20). During the 10-week treatment period, all subjects performed daily computerized perceptual training and eye patching. There was no significant difference in treatment efficacy between the groups. Visual acuity at the primary endpoint had significantly improved over baseline in both the fluoxetine (−0.167 logMAR) and placebo (−0.194 logMAR) groups (both p < 0.001). Because patching alone is not effective in adults, the visual acuity improvement likely resulted from perceptual training. There was a positive correlation between visual acuity improvement and the perceptual training time. While this study failed to provide evidence that fluoxetine enhances neuroplasticity, our data support the usefulness of perceptual training for vision improvement in adults with amblyopia.
Seroprevalence of Hepatitis B and C among Healthcare Workers in Dutse Metropolis Jigawa State, Nigeria
Authors: Sani N.M. , Bitrus I. , Sarki A.M. , Mujahid N.S. 
Published: May 2018

AbstractHepatitis is one of the neglected infectious diseases in sub Saharan Africa and most of the available data is based on blood donors. Health care workers (HCWs) often get infected as a result of their close contact with patients. A cross sectional study was conducted to determine the prevalence of hepatitis B and C among this group of professionals with a view to improving the quality of care to their patients. Hepatitis B and C infections pose a major public health problem worldwide. While infection is highest in the developing world particularly Asia and sub-Saharan Africa, healthcare workers are at higher risk of acquiring blood-borne viral infections, particularly Hepatitis B and C which are mostly asymptomatic. This study was aimed at determining the prevalence of Hepatitis B and C infections and associated risk factors among health care workers in Dutse Metropolis, Jigawa State - Nigeria. A standard rapid immuno-chromatographic technique i.e. rapid ELISA was used to screen all sera for Hepatitis B surface antigen (HBsAg) and Hepatitis C viral antibody (HCVAb) respectively. Strips containing coated antibodies and antigens to HBV and HCV respectively were removed from the foil. Strips were labeled according to samples. Using a separate disposable pipette, 2 drops of the sample (plasma) were added into each test strip and allowed to run across the absorbent pad. Results were read after 15 minutes. The prevalence of HBV and HCV infection in 100 healthcare workers was determined by testing the plasma collected from the clients during their normal checkup using HBsAg and HCVAb test strips. Results were subjected to statistical analysis using chi-square test. The prevalence of HBV among HCWs was 19 out of 100 (19.0%) and that of HCV was 5 out of 100 (5.0%) where in both cases, higher prevalence was observed among female nurses. It was also observed that all HCV positive cases were recorded among nurses only. The study revealed that nurses are at greater risk of contracting HBV and HCV due to their frequent contact with patients. It is therefore recommended that effective vaccination and other infection control measures be encouraged among healthcare workers.
Non-coding AUG circRNAs constitute an abundant and conserved subclass of circles
Authors: Stagsted Lotte VW , Nielsen Katrine M , Daugaard Iben , Hansen Thomas B 
Published: May 2018

AbstractCircular RNAs (circRNAs) are a subset of non-coding RNAs (ncRNAs) previously considered as products of missplicing. Now, circRNAs are considered functional molecules, although to date, only few functions have been experimentally validated, and therefore the vast majority of circRNAs are without known relevance. Here, based on RNA sequencing from the ENCODE consortium, we identify and characterize a subset of circRNAs, coined AUG circRNAs, encompassing the annotated translational start codon from the protein-coding host genes. AUG circRNAs are more abundantly expressed and conserved than other groups of circRNAs, and they display anAlu-independent mechanism of biogenesis. The AUG circRNAs contain part of bona fide ORF, and in the recent years, several studies have reported cases of circRNA translation. However, using thorough cross-species analysis, extensive ribosome profiling, proteomics analyses, and experimental data on a selected panel of AUG circRNAs, we observe no indications of translation of AUG circRNAs or any other circRNAs. Our data provide a comprehensive classification of circRNAs and, collectively, the data suggest that the AUG circRNAs constitute an abundant subclass of circRNAs produced independently of primate-specificAluelements. Moreover, AUG circRNAs exhibit high cross-species conservation and are therefore likely to be functionally relevant.
Direct preparation of Cas9 ribonucleoprotein from E. coli for PCR-free seamless DNA assembly
Authors: Li Wenqiang , Li Shuntang , Qiao Jie , Wang Fei , Liu Yang , He Ruyi , Liu Yi , Ma Lixin 
Published: May 2018

AbstractCRISPR-Cas9 is a versatile and powerful genome engineering tool. Recently, Cas9 ribonucleoprotein (RNP) complexes have been used as promising biological tools with plenty of in vivo and in vitro applications, but there are by far no efficient methods to produce Cas9 RNP at large scale and low cost. Here, we describe a simple and effective approach for direct preparation of Cas9 RNP from E. coli by co-expressing Cas9 and target specific single guided RNAs. The purified RNP showed in vivo genome editing ability, as well as in vitro endonuclease activity that combines with an unexpected superior stability to enable routine uses in molecular cloning instead of restriction enzymes. We further develop a RNP-based PCR-free method termed Cas-Brick in a one-step or cyclic way for seamless assembly of multiple DNA fragments with high fidelity up to 99%. Altogether, our findings provide a general strategy to prepare Cas9 RNP and supply a convenient and cost-effective DNA assembly method as an invaluable addition to synthetic biological toolboxes.
Hydrogen-based metabolism – an ancestral trait in lineages sibling to the Cyanobacteria
Authors: Matheus Carnevali Paula B. , Schulz Frederik , Castelle Cindy J. , Kantor Rose , Shih Patrick , Sharon Itai , Santini Joanne M. , Olm Matthew , Amano Yuki , Thomas Brian C. , Anantharaman Karthik , Burstein David , Becraft Eric D. , Stepanauskas Ramunas , Woyke Tanja , Banfield Jillian F. 
Published: May 2018

AbstractThe metabolic machinery from which microbial aerobic respiration evolved is tightly linked to the origins of oxygenic Cyanobacteria (Oxyphotobacteria). Even though the majority of Oxyphotobacteria are photoautotrophs and can use carbohydrates with oxygen (O2) as the electron acceptor, all are fermenters under dark anoxic conditions. Studies suggest that the ancestor of Oxyphotobacteria may have used hydrogen (H2) as an electron donor and that two types of NiFe hydrogenases are essential for its oxidation. Melainabacteria and Sericytochromatia, close phylogenetic neighbors to Oxyphotobacteria comprise fermentative and aerobic representatives, or organisms capable of both. Margulisbacteria (candidate divisions RBX-1 and ZB3) and Saganbacteria (candidate division WOR-1), a novel cluster of bacteria phylogenetically related to Melainabacteria, Sericytochromatia and Oxyphotobacteria may further constrain the metabolic platform in which oxygenic photosynthesis and aerobic respiration arose. Here, we predict the metabolisms of Margulisbacteria and Saganbacteria from new and published metagenome-assembled genomes (MAGs) and single amplified genomes (SAGs), and compare them to their phylogenetic neighbors. Sediment-associated Margulisbacteria are predicted to have a fermentation-based metabolism featuring a variety of hydrogenases, a nitrogenase for nitrogen (N2) fixation, and electron bifurcating complexes involved in cycling of ferredoxin and NAD(P)H. Overall, the genomic features suggest the capacity for metabolic fine-tuning under strictly anoxic conditions. In contrast, the genomes of Margulisbacteria from the ocean ecosystem encode an electron transport chain that supports aerobic growth. Similarly, some Saganbacteria genomes encode various hydrogenases, and others may have the ability to use O2 under certain conditions via a putative novel type of heme copper O2 reductase. Like Melainabacteria and Sericytochromatia, Margulisbacteria and Saganbacteria have diverse energy metabolisms capable of fermentation, and aerobic or anaerobic respiration. In summary, our findings support the hypothesis that the ancestor of these groups was an anaerobe in which fermentation and H2 metabolism were central metabolic features. Our genomic data also suggests that contemporary lineages sibling to the Oxyphotobacteria may have acquired the ability to use O2 as a terminal electron acceptor under certain environmental conditions.
The marine goby – alpheid shrimp symbiosis doesnotcorrelate with larger fish eye size
Authors: Stiefel Klaus M. , Reyes Rodolfo B. 
Published: May 2018

AbstractThe symbiosis between marine gobies and Alpheid shrimp is based on an exchange of sensory performance (look-out for predators) by the goby versus muscular performance (burrow digging) by the shrimp. Using a comparative approach, we estimate the excess investment by the goby into its visual system as a consequence of the symbiosis. When correlating eye size with fish length for both shrimp-associated and solitary gobies, we find that the shrimp-associated gobies donothave larger eyes than size-matched solitary gobies.We do find a trend, however, in that the shrimp-associated gobies live at shallower depths than the solitary gobies, indicative of the visual nature of the symbiosis. We discuss the implications of symbiosis based on large and small energy investments, and the evolutionary modifications likely necessary to include shrimp-goby communication into the behavior of the goby.
Accounting for taste: A multi-attribute neurocomputational model explains the neural dynamics of choices for self and others
Authors: Harris Alison , Clithero John A. , Hutcherson Cendri A. 
Published: May 2018

AbstractHow do we make choices for others with different preferences from our own? Although neuroimaging studies implicate similar circuits in representing preferences for oneself and others, some models propose that additional corrective mechanisms come online when choices for others diverge from one’s own preferences. Here we used event-related potentials (ERP) in humans, in combination with computational modeling, to examine how social information is integrated in the time leading up to choices for oneself and others. Hungry male and female participants with unrestricted diets selected foods for themselves, a similar unrestricted eater, and a dissimilar, self-identified healthy eater. Across choices for both oneself and others, ERP value signals emerged within the same time window but differentially reflected taste and health attributes based on the recipient’s preferences. Choices for the dissimilar recipient were associated with earlier activity localized to brain regions implicated in social cognition including temporoparietal junction (TPJ). Finally, response-locked analysis revealed a late ERP component specific to choices for the similar recipient, localized to the parietal lobe, that appeared to reflect differences in the response threshold based on uncertainty. A multi-attribute computational model supported the link between specific ERP components and distinct model parameters, and was not significantly improved by adding time-dependent dual processes. Model simulations suggested that longer response times (RTs) previously associated with effortful correction may alternatively arise from higher choice uncertainty. Together these results provide a parsimonious neurocomputational mechanism for social decision-making, additionally explaining divergent patterns of choice and RT data in decisions for oneself and others.Significance StatementHow do we choose for others, particularly when they have different preferences? Whereas some studies suggest that similar neural circuits underlie decision-making for oneself and others, others argue for additional, slower perspective-taking mechanisms. Combining event-related potentials with computational modeling, we found that integration of others’ preferences occurs over the same timescale as for oneself, while differentially tracking recipient-relevant attributes. Although choosing for others took longer and produced differences in late-emerging neural responses, computational modeling attributed these patterns to greater response caution rather than egocentric bias correction. Computational simulations also correctly predicted when and why choosing differently for others takes longer, suggesting that a model incorporating value integration and evidence accumulation can parsimoniously account for complex patterns in social decision-making.