bluuebunny/crossref_metadata_2025_split huggingface dataset:
Prediction complements explanation in understanding the developing brain
Authors: Rosenberg Monica D. , Casey B. J. , Holmes Avram J. 
Published: February 2018

AbstractA central aim of human neuroscience is understanding the neurobiology of cognition and behavior. Although we have made significant progress towards this goal, reliance on group-level studies of the developed adult brain has limited our ability to explain population variability and developmental changes in neural circuitry and behavior. In this review, we suggest that predictive modeling, a method for predicting individual differences in behavior from brain features, can complement descriptive approaches and provide new ways to account for this variability. Highlighting the outsized scientific and clinical benefits of prediction in developmental populations including adolescence, we show that predictive brain-based models are already providing new insights on adolescent-specific risk-related behaviors. Together with large-scale developmental neuroimaging datasets and complementary analytic approaches, predictive modeling affords us the opportunity and obligation to identify novel treatment targets and individually tailor the course of interventions for developmental psychopathologies that impact so many young people today.
TRIM56-mediated monoubiquitination of cGAS for cytosolic DNA sensing
Authors: Seo Gil Ju , Kim Charlotte , Shin Woo-Jin , Sklan Ella H. , Eoh Hyungjin , Jung Jae U. 
Published: February 2018

AbstractIntracellular nucleic acid sensors often undergo sophisticated modifications that are critical for the regulation of antimicrobial responses. Upon recognition of DNA, the cytosolic sensor cyclic GMP-AMP (cGAMP) synthase (cGAS) produces the second messenger cGAMP, which subsequently initiates downstream signaling to induce interferon-αβ (IFNαβ) production. Here we report that TRIM56 E3 ligase-induced monoubiquitination of cGAS is important for cytosolic DNA sensing and IFNαβ production to induce anti-DNA viral immunity. TRIM56 induces the Lys335 monoubiquitination of cGAS, resulting in a marked increase of its dimerization, DNA-binding activity, and cGAMP production. Consequently, TRIM56-deficient cells are defective in cGAS-mediated IFNαβ production upon herpes simplex virus-1 (HSV-1) infection. Furthermore, TRIM56-deficient mice show impaired IFNαβ production and high susceptibility to lethal HSV-1 infection but not to influenza A virus infection. This adds TRIM56 as a crucial component of the cytosolic DNA sensing pathway that induces anti-DNA viral innate immunity.
A printable hydrogel microarray for drug screening avoids false positives associated with promiscuous aggregating inhibitors
Authors: Mateen Rabia , Ali M. Monsur , Hoare Todd 
Published: February 2018

AbstractA significant problem in high-throughput drug screening is the disproportionate number of false hits associated with drug candidates that form colloidal aggregates. Such molecules, referred to as promiscuous inhibitors, nonspecifically inhibit multiple enzymes and are thus not useful as potential drugs. Here, we report a printable hydrogel-based drug-screening platform capable of non-ambiguously differentiating true enzyme inhibitors from promiscuous aggregating inhibitors, critical for accelerating the drug discovery process. The printed hydrogels can both immobilize as well as support the activity of entrapped enzymes against drying or treatment with a protease or chemical denaturant. Furthermore, the printed hydrogel can be applied in a high-throughput microarray-based screening platform (consistent with current practice) to rapidly ( <25 min) and inexpensively identify only clinically promising lead compounds with true inhibitory potential as well as to accurately quantify the dose–response relationships of those inhibitors, all while using 95% less sample than required for a solution assay.
Spectroscopy of bulk and few-layer superconducting NbSe2 with van der Waals tunnel junctions
Authors: Dvir T. , Massee F. , Attias L. , Khodas M. , Aprili M. , Quay C. H. L. , Steinberg H. 
Published: February 2018

AbstractTunnel junctions, an established platform for high resolution spectroscopy of superconductors, require defect-free insulating barriers; however, oxides, the most common barrier, can only grow on a limited selection of materials. We show that van der Waals tunnel barriers, fabricated by exfoliation and transfer of layered semiconductors, sustain stable currents with strong suppression of sub-gap tunneling. This allows us to measure the spectra of bulk (20 nm) and ultrathin (3- and 4-layer) NbSe2 devices at 70 mK. These exhibit two distinct superconducting gaps, the larger of which decreases monotonically with thickness and critical temperature. The spectra are analyzed using a two-band model incorporating depairing. In the bulk, the smaller gap exhibits strong depairing in in-plane magnetic fields, consistent with high out-of-plane Fermi velocity. In the few-layer devices, the large gap exhibits negligible depairing, consistent with out-of-plane spin locking due to Ising spin–orbit coupling. In the 3-layer device, the large gap persists beyond the Pauli limit.
Lifting the bandwidth limit of optical homodyne measurement with broadband parametric amplification
Authors: Shaked Yaakov , Michael Yoad , Vered Rafi Z. , Bello Leon , Rosenbluh Michael , Pe’er Avi 
Published: February 2018

AbstractHomodyne measurement is a corner-stone method of quantum optics that measures the quadratures of light—the quantum optical analog of the canonical position and momentum. Standard homodyne, however, suffers from a severe bandwidth limitation: while the bandwidth of optical states can span many THz, standard homodyne is inherently limited to the electronically accessible MHz-to-GHz range, leaving a dramatic gap between relevant optical phenomena and the measurement capability. We demonstrate a fully parallel optical homodyne measurement across an arbitrary optical bandwidth, effectively lifting this bandwidth limitation completely. Using optical parametric amplification, which amplifies one quadrature while attenuating the other, we measure quadrature squeezing of 1.7 dB simultaneously across 55 THz, using the pump as the only local oscillator. As opposed to standard homodyne, our measurement is robust to detection inefficiency, and was obtained with >50% detection loss. Broadband parametric homodyne opens a wide window for parallel processing of quantum information.
Media use and brain development during adolescence
Authors: Crone Eveline A. , Konijn Elly A. 
Published: February 2018

AbstractThe current generation of adolescents grows up in a media-saturated world. However, it is unclear how media influences the maturational trajectories of brain regions involved in social interactions. Here we review the neural development in adolescence and show how neuroscience can provide a deeper understanding of developmental sensitivities related to adolescents’ media use. We argue that adolescents are highly sensitive to acceptance and rejection through social media, and that their heightened emotional sensitivity and protracted development of reflective processing and cognitive control may make them specifically reactive to emotion-arousing media. This review illustrates how neuroscience may help understand the mutual influence of media and peers on adolescents’ well-being and opinion formation.
Low-cost, μm-thick, tape-free electronic tattoo sensors with minimized motion and sweat artifacts
Authors: Wang Youhua , Qiu Yitao , Ameri Shideh Kabiri , Jang Hongwoo , Dai Zhaohe , Huang YongAn , Lu Nanshu 
Published: February 2018

AbstractElectronic tattoos (e-tattoos), also known as epidermal electronics, are ultra-thin and ultra-soft noninvasive but skin-conformable devices with capabilities including physiological sensing and transdermal stimulation and therapeutics. The fabrication of e-tattoos out of conventional inorganic electronic materials used to be tedious and expensive. Recently developed cut-and-paste method has significantly simplified the process and lowered the cost. However, existing cut-and-paste method entails a medical tape on which the electronic tattoo sensors should be pasted, which increases tattoo thickness and degrades its breathability. To address this problem, here we report a slightly modified cut-and-paste method to fabricate low-cost, open-mesh e-tattoos with a total thickness of just 1.5 μm. E-tattoos of such thinness can be directly pasted on human skin and conforms to natural skin texture. We demonstrate that this ultra-thin, tape-free e-tattoo can confidently measure electrocardiogram (ECG), skin temperature, and skin hydration. Heart rate and even respiratory rate can be extracted from the ECG signals. A special advantage of such ultra-thin e-tattoo is that it is capable of high-fidelity sensing with minimized motion artifacts under various body movements. Effects of perspiration are found to be insignificant due to the breathability of such e-tattoos.
Large-scale roll-to-roll printed, flexible and stable organic bulk heterojunction photodetector
Authors: Tong Sichao , Yuan Jun , Zhang Chujun , Wang Chunhua , Liu Baoxing , Shen Jianqiang , Xia Huayan , Zou Yingping , Xie Haipeng , Sun Jia , Xiao Si , He Jun , Gao Yongli , Yang Junliang 
Published: February 2018

AbstractA flexible and stable photodetector shows great potential applications in intelligent wearable devices, health monitoring, and biological sensing. The high-output fabrication of flexible and stable photodetector via the large-scale printing process would accelerate its commercialization. Herein, a high performance, flexible organic bulk heterojunction (BHJ) photodetector with good stability is designed and fabricated via a large-scale roll-to-roll (R2R) micro-gravure printing technique on polyethylene terephthalate (PET) or paper substrate, in which the organic BHJ active layer is structured with [6,6]-phenyl C61 butyric acid methyl ester (PCBM) and a donor–acceptor copolymer, i.e., employing 4,8-bis(2-ethylhexylthiophene) benzo[1,2-b;3,4-b′] dithiophene (BDTT) as the donor unit and 5,8-bis(5-thiophen-2-yl)-6,7-difluoro-2,3-bis(4-ethylhexyloxy-1-mata-luorophenyl) quinoxaline (ffQx) as the acceptor unit (PBDTT-ffQx). The PBDTT-ffQx/PCBM BHJ photodetector shows a broad photoresponse in ultraviolet and visible light, a high detectivity (D*) value up to 6.19 × 1011 Jones, and an excellent Iphoto/Idark as high as 5.6 × 102. It exhibits excellent flexibility and stability. Its performance parameters could maintain over 80% of original values after bending 10,000 cycles or exposing in ambient condition (humidity ~50%, temperature ~30 °C) for 50 days without any encapsulation. More importantly, the R2R micro-gravure printed PBDTT-ffQx/PCBM BHJ active layer is great homogeneous, and the responsivity (R) values of photodetector arrays show a very narrow distribution. The research results show that a high-performance PBDTT-ffQx/PCBM BHJ photodetector with well reliability and reproducibility can be fabricated via the R2R micro-gravure printing technique, which provides an available strategy for fabricating large-area and flexible electronic and optoelectronic devices.
Unconventional and conventional quantum criticalities in CeRh0.58Ir0.42In5
Authors: Luo Yongkang , Lu Xin , Dioguardi Adam P. , Rosa Priscila S. F. , Bauer Eric D. , Si Qimiao , Thompson Joe D. 
Published: February 2018

AbstractAn appropriate description of the state of matter that appears as a second order phase transition is tuned toward zero temperature, viz. quantum-critical point (QCP), poses fundamental and still not fully answered questions. Experiments are needed both to test basic conclusions and to guide further refinement of theoretical models. Here, charge and entropy transport properties as well as AC specific heat of the heavy-fermion compound CeRh0.58Ir0.42In5, measured as a function of pressure, reveal two qualitatively different QCPs in a single material driven by a single non-symmetry-breaking tuning parameter. A discontinuous sign-change jump in thermopower suggests an unconventional QCP at pc1 accompanied by an abrupt Fermi-surface reconstruction that is followed by a conventional spin-density-wave critical point at pc2 across which the Fermi surface evolves smoothly to a heavy Fermi-liquid state. These experiments are consistent with some theoretical predictions, including the sequence of critical points and the temperature dependence of the thermopower in their vicinity.
Novel reversibly switchable fluorescent proteins for RESOLFT and STED nanoscopy engineered from the bacterial photoreceptor YtvA
Authors: Gregor Carola , Sidenstein Sven C. , Andresen Martin , Sahl Steffen J. , Danzl Johann G. , Hell Stefan W. 
Published: February 2018

AbstractThe reversibly switchable fluorescent proteins (RSFPs) commonly used for RESOLFT nanoscopy have been developed from fluorescent proteins of the GFP superfamily. These proteins are bright, but exhibit several drawbacks such as relatively large size, oxygen-dependence, sensitivity to low pH, and limited switching speed. Therefore, RSFPs from other origins with improved properties need to be explored. Here, we report the development of two RSFPs based on the LOV domain of the photoreceptor protein YtvA from Bacillus subtilis. LOV domains obtain their fluorescence by association with the abundant cellular cofactor flavin mononucleotide (FMN). Under illumination with blue and ultraviolet light, they undergo a photocycle, making these proteins inherently photoswitchable. Our first improved variant, rsLOV1, can be used for RESOLFT imaging, whereas rsLOV2 proved useful for STED nanoscopy of living cells with a resolution of down to 50 nm. In addition to their smaller size compared to GFP-related proteins (17 kDa instead of 27 kDa) and their usability at low pH, rsLOV1 and rsLOV2 exhibit faster switching kinetics, switching on and off 3 times faster than rsEGFP2, the fastest-switching RSFP reported to date. Therefore, LOV-domain-based RSFPs have potential for applications where the switching speed of GFP-based proteins is limiting.
Quantum ensembles of quantum classifiers
Authors: Schuld Maria , Petruccione Francesco 
Published: February 2018

AbstractQuantum machine learning witnesses an increasing amount of quantum algorithms for data-driven decision making, a problem with potential applications ranging from automated image recognition to medical diagnosis. Many of those algorithms are implementations of quantum classifiers, or models for the classification of data inputs with a quantum computer. Following the success of collective decision making with ensembles in classical machine learning, this paper introduces the concept of quantum ensembles of quantum classifiers. Creating the ensemble corresponds to a state preparation routine, after which the quantum classifiers are evaluated in parallel and their combined decision is accessed by a single-qubit measurement. This framework naturally allows for exponentially large ensembles in which – similar to Bayesian learning – the individual classifiers do not have to be trained. As an example, we analyse an exponentially large quantum ensemble in which each classifier is weighed according to its performance in classifying the training data, leading to new results for quantum as well as classical machine learning.
Differential gene expression induced by anti-cancer agent plumbagin is mediated by androgen receptor in prostate cancer cells
Authors: Rondeau Gaelle , Abedinpour Parisa , Chrastina Adrian , Pelayo Jennifer , Borgstrom Per , Welsh John 
Published: February 2018

AbstractTreatment of mice harboring PTEN-P2 tumors in the prostate or on prostate tissue in vivo with 5-hydroxy-2-methyl-1,4-naphthoquinone, also known as plumbagin, results in tumor regression in castrated mice, but not in intact mice. This suggested that dihydrotestosterone (DHT) production in the testes may prevent cell death due to plumbagin treatment, but the underlying mechanism is not understood. We performed RNA-seq analysis on cells treated with combinations of plumbagin and DHT, and analyzed differential gene expression, to gain insight into the interactions between androgen and plumbgin. DHT and plumbagin synergize to alter the expression of many genes that are not differentially regulated by either single agent when used alone. These experiments revealed that, for many genes, increases in mRNAs caused by DHT are sharply down-regulated by plumbagin, and that many transcripts change in response to plumbagin in a DHT-dependent manner. This suggests that androgen receptor mediates some of the effects of plumbagin on gene expression.
Transitions from Ideal to Intermediate Cholesterol Levels may vary by Cholesterol Metric
Authors: Engeda Joseph C. , Holliday Katelyn M. , Hardy Shakia T. , Chakladar Sujatro , Lin Dan-Yu , Talavera Gregory A. , Howard Barbara V. , Daviglus Martha L. , Pirzada Amber , Schreiner Pamela J. , Zeng Donglin , Avery Christy L. 
Published: February 2018

AbstractTo examine the ability of total cholesterol (TC), a low-density lipoprotein cholesterol (LDL-C) proxy widely used in public health initiatives, to capture important population-level shifts away from ideal and intermediate LDL-C throughout adulthood. We estimated age (≥20 years)-, race/ethnic (Caucasian, African American, and Hispanic/Latino)-, and sex- specific net transition probabilities between ideal, intermediate, and poor TC and LDL-C using National Health and Nutrition Examination Survey (2007–2014; N = 13,584) and Hispanic Community Health Study/Study of Latinos (2008–2011; N = 15,612) data in 2016 and validated and calibrated novel Markov-type models designed for cross-sectional data. At age 20, >80% of participants had ideal TC, whereas the race/ethnic- and sex-specific prevalence of ideal LDL-C ranged from 39.2%-59.6%. Net transition estimates suggested that the largest one-year net shifts away from ideal and intermediate LDL-C occurred approximately two decades earlier than peak net population shifts away from ideal and intermediate TC. Public health and clinical initiatives focused on monitoring TC in middle-adulthood may miss important shifts away from ideal and intermediate LDL-C, potentially increasing the duration, perhaps by decades, that large segments of the population are exposed to suboptimal LDL-C.
Morphological and molecular dissection of wild rices from eastern India suggests distinct speciation between O. rufipogon and O. nivara populations
Authors: Samal Rashmita , Roy Pritesh Sundar , Sahoo Auromira , Kar Meera Kumari , Patra Bhaskar Chandra , Marndi Bishnu Charan , Gundimeda Jwala Narasimha Rao 
Published: February 2018

AbstractThe inter relationships between the two progenitors is interesting as both wild relatives are known to be the great untapped gene reservoirs. The debate continues on granting a separate species status to Oryza nivara. The present study was conducted on populations of Oryza rufipogon and Oryza nivara from Eastern India employing morphological and molecular characteristics. The cluster analysis of the data on morphological traits could clearly classify the two wild forms into two separate discrete groups without any overlaps i.e. lack of intermediate forms, suggesting the non-sympatric existence of the wild forms. Amplification of hyper variable regions of the genome could reveal 144 alleles suggesting high genetic diversity values (average He = 0.566). Moreover, with 42.37% of uncommon alleles between the two wild relatives, the molecular variance analysis (AMOVA) could detect only 21% of total variation (p < 0.001) among them and rest 59% was within them. The population structure analysis clearly classified these two wild populations into two distinct sub-populations (K = 2) without any overlaps i.e. lack of intermediate forms, suggesting the non-sympatric existence of the wild forms. Clear differentiation into two distinct groups indicates that O. rufipogon and O. nivara could be treated as two different species.
Extracellular cholesterol oxidase production by Streptomyces aegyptia, in vitro anticancer activities against rhabdomyosarcoma, breast cancer cell-lines and in vivo apoptosis
Authors: El-Naggar Noura El-Ahmady , Soliman Hoda M. , El-Shweihy Nancy M. 
Published: February 2018

AbstractIn recent years, microbial cholesterol oxidases have gained great attention due to its widespread use in medical applications for serum cholesterol determination.Streptomyces aegyptiastrain NEAE-102 exhibited high level of extracellular cholesterol oxidase production using a minimum medium containing cholesterol as the sole source of carbon. Fifteen variables were screened using Plackett–Burman design for the enhanced cholesterol oxidase production. The most significant variables affecting enzyme production were further optimized by using the face-centered central composite design. The statistical optimization resulted in an overall 4.97-fold increase (15.631 UmL−1) in cholesterol oxidase production in the optimized medium as compared with the unoptimized medium before applying Plackett Burman design (3.1 UmL−1). The purified cholesterol oxidase was evaluated for itsin vitroanticancer activities against five human cancer cell lines. The selectivity index values on rhabdomyosarcoma and breast cancer cell lines were 3.26 and 2.56; respectively. Thein vivoanticancer activity of cholesterol oxidase was evaluated against Ehrlich solid tumor model. Compared with control mice, tumors growth was significantly inhibited in the mice injected with cholesterol oxidase alone, doxorubicin alone and cholesterol oxidase/doxorubicin combination by 60.97%, 72.99% and 97.04%; respectively. These results demonstrated that cholesterol oxidase can be used as a promising natural anticancer drug.
Evoked and oscillatory EEG activity differentiates language discrimination in young monolingual and bilingual infants
Authors: Nacar Garcia Loreto , Guerrero-Mosquera Carlos , Colomer Marc , Sebastian-Galles Nuria 
Published: February 2018

AbstractLanguage discrimination is one of the core differences between bilingual and monolingual language acquisition. Here, we investigate the earliest brain specialization induced by it. Following previous research, we hypothesize that bilingual native language discrimination is a complex process involving specific processing of the prosodic properties of the speech signal. We recorded the brain activity of monolingual and bilingual 4.5-month-old infants using EEG, while listening to their native/dominant language and two foreign languages. We defined two different windows of analysis to separate discrimination and identification effects. In the early window of analysis (150–280 ms) we measured the P200 component, and in the later window of analysis we measured Theta (400–1800 ms) and Gamma (300–2800 ms) oscillations. The results point in the direction of different language discrimination strategies for bilingual and monolingual infants. While only monolingual infants show early discrimination of their native language based on familiarity, bilinguals perform a later processing which is compatible with an increase in attention to the speech signal. This is the earliest evidence found for brain specialization induced by bilingualism.