bluuebunny/crossref_metadata_2025_split huggingface dataset:
Cardiovascular Disease Risk Varies by Birth Month in Canines
Authors: Boland Mary Regina , Kraus Marc S. , Dziuk Eddie , Gelzer Anna R. 
Published: May 2018

AbstractThe canine heart is a robust physiological model for the human heart. Recently, birth month associations have been reported and replicated in humans using clinical health records. While animals respond readily to their environment in the wild, a systematic investigation of birth season dependencies among pets and specifically canines remains lacking. We obtained data from the Orthopedic Foundation of Animals on 129,778 canines representing 253 distinct breeds. Among canines that were not predisposed to cardiovascular disease, a clear birth season relationship is observed with peak risk occurring in June-August. Our findings indicate that acquired cardiovascular disease among canines, especially those that are not predisposed to cardiovascular disease, appears birth season dependent. The relative risk of cardiovascular disease for canines not predisposed to cardiovascular disease was as high as 1.47 among July pups. The overall adjusted odds ratio, when mixed breeds were excluded, for the birth season effect was 1.02 (95% CI: 1.002, 1.047, p = 0.032) after adjusting for breed and genetic cardiovascular predisposition effects. Studying birth season effects in model organisms can help to elucidate potential mechanisms behind the reported associations.
Evaluation of WISP1 as a candidate gene for bone mineral density in the Old Order Amish
Authors: Wang Xing , Salimi Shabnam , Deng Zhongliang , Perry James , Ryan Kathleen A. , Li Zhizhen , Liu Dongfang , Streeten Elizabeth , Shuldiner Alan R. , Fu Mao 
Published: May 2018

AbstractWnt1-inducible signaling pathway protein-1 (WISP1) is a novel target of the Wnt pathway for modulating osteogenesis and improving bone strength. However, it is not clear if genetic variants in the WISP1 region are associated with bone mineral density (BMD) in human. The aim of this study is to investigate the role of genetic variation in WISP1 gene as a determinant of BMD in 1,510 Old Order Amish (OOA). We performed regional association analysis of 58 tag variants within 5 kb upstream and downstream to WISP1 with BMD and found 5 variants that were associated with BMD at multiple skeletal sites (P values from 2.89 × 10−6 to 1.62 × 10−2), with some significant associations even after adjustment for multiple comparisons. To replicate these results in an independent dataset, we performed a look-up of BMD associations with these variants in European ancestry subjects from the large GEFOS Consortium and observed the nominal associations of two of these variants with BMD (P values: 0.031 to 0.048). In conclusion, we have demonstrated that genetic variants surrounding WISP1 are associated with BMD at multiple skeletal sites in the OOA, thus influencing osteoporosis risk. These results support a role for the WISP1 gene on influencing variation in BMD.
Assessing causal estimates of the association of obesity-related traits with coronary artery disease using a Mendelian randomization approach
Authors: Zhang Xue , Lv Wan-Qiang , Qiu Bo , Zhang Li-Jun , Qin Jian , Tang Feng-Juan , Wang Hai-Tao , Li Hua-Jie , Hao Ya-Rong 
Published: May 2018

AbstractObesity-related traits have been associated with coronary artery disease (CAD) in observational studies, but these associations may be biased by confounding factors and reverse causation. In this study, we specifically conducted two-sample Mendelian randomization (MR) analyses to overcome these limitations and test the associations of obesity-related traits (other than body mass index (BMI)) (n = 322,154) with CAD (22,233 cases and 64,762 controls) by using summary-level data from previous studies. The methods utilized to estimate these associations included the inverse-variance weighted method, the weighted median method and MR-Egger regression. Our results supported causal effects of BMI, hip circumference (HC), waist circumference (WC), and waist-hip ratio (WHR) on CAD. The associations of BMI-adjusted HC and WC with CAD were reversed, unlike that of WHR. In MR analyses excluding overlapping single nucleotide polymorphisms (SNPs) from obesity-related traits, the associations of these traits with CAD were preserved. The associations of BMI-adjusted HC and WC with CAD require further investigation, as collider stratification may be occurring. Additionally, central adiposity (measured by WHR) separated from general adiposity (measured by BMI) and general adiposity might pose similar risks for CAD. In clinical practice, physicians should pay attention to the potential effects of different obesity-related traits on CAD.
Evidence of soft bound behaviour in analogue memristive devices for neuromorphic computing
Authors: Frascaroli Jacopo , Brivio Stefano , Covi Erika , Spiga Sabina 
Published: May 2018

AbstractThe development of devices that can modulate their conductance under the application of electrical stimuli constitutes a fundamental step towards the realization of synaptic connectivity in neural networks. Optimization of synaptic functionality requires the understanding of the analogue conductance update under different programming conditions. Moreover, properties of physical devices such as bounded conductance values and state-dependent modulation should be considered as they affect storage capacity and performance of the network. This work provides a study of the conductance dynamics produced by identical pulses as a function of the programming parameters in an HfO2 memristive device. The application of a phenomenological model that considers a soft approach to the conductance boundaries allows the identification of different operation regimes and to quantify conductance modulation in the analogue region. Device non-linear switching kinetics is recognized as the physical origin of the transition between different dynamics and motivates the crucial trade-off between degree of analog modulation and memory window. Different kinetics for the processes of conductance increase and decrease account for device programming asymmetry. The identification of programming trade-off together with an evaluation of device variations provide a guideline for the optimization of the analogue programming in view of hardware implementation of neural networks.
Novel antibiofilm chemotherapies target nitrogen from glutamate and glutamine
Authors: Hassanov Tal , Karunker Iris , Steinberg Nitai , Erez Ayelet , Kolodkin-Gal Ilana 
Published: May 2018

AbstractBacteria in nature often reside in differentiated communities termed biofilms, which are an active interphase between uni-cellular and multicellular life states for bacteria. Here we demonstrate that the development of B. subtilis biofilms is dependent on the use of glutamine or glutamate as a nitrogen source. We show a differential metabolic requirement within the biofilm; while glutamine is necessary for the dividing cells at the edges, the inner cell mass utilizes lactic acid. Our results indicate that biofilm cells preserve a short-term memory of glutamate metabolism. Finally, we establish that drugs that target glutamine and glutamate utilization restrict biofilm development. Overall, our work reveals a spatial regulation of nitrogen and carbon metabolism within the biofilm, which contributes to the fitness of bacterial complex communities. This acquired metabolic division of labor within biofilm can serve as a target for novel anti-biofilm chemotherapies
Examining a Thermodynamic Order Parameter of Protein Folding
Authors: Chong Song-Ho , Ham Sihyun 
Published: May 2018

AbstractDimensionality reduction with a suitable choice of order parameters or reaction coordinates is commonly used for analyzing high-dimensional time-series data generated by atomistic biomolecular simulations. So far, geometric order parameters, such as the root mean square deviation, fraction of native amino acid contacts, and collective coordinates that best characterize rare or large conformational transitions, have been prevailing in protein folding studies. Here, we show that the solvent-averaged effective energy, which is a thermodynamic quantity but unambiguously defined for individual protein conformations, serves as a good order parameter of protein folding. This is illustrated through the application to the folding-unfolding simulation trajectory of villin headpiece subdomain. We rationalize the suitability of the effective energy as an order parameter by the funneledness of the underlying protein free energy landscape. We also demonstrate that an improved conformational space discretization is achieved by incorporating the effective energy. The most distinctive feature of this thermodynamic order parameter is that it works in pointing to near-native folded structures even when the knowledge of the native structure is lacking, and the use of the effective energy will also find applications in combination with methods of protein structure prediction.
An initial melanoma diagnosis may increase the subsequent risk of prostate cancer: Results from the New South Wales Cancer Registry
Authors: Cole-Clark D. , Nair-Shalliker V. , Bang A. , Rasiah K. , Chalasani V. , Smith D. P. 
Published: May 2018

AbstractEmerging evidence suggests that a diagnosis of cutaneous melanoma (CM) may be associated with prostate cancer (PC) incidence. We examined if the incidence of CM was associated with an increased subsequent risk of PC. We used data from the New South Wales Cancer Registry for all CM and PC cases diagnosed between January 1972 and December 2008. We calculated the age standardized incidence ratio (SIR) and 95% confidence intervals (95% CI) for PC incidence following a CM diagnosis, applying age- and calendar- specific rates to the appropriate person years at risk. We determined rate ratio (RR) and 95% CI of PC incidence according to specified socio-demographic categories and disease related characteristics, using a negative binomial model. There were 143,594 men diagnosed with PC or CM in the study period and of these 101,198 and 42,396 were diagnosed with PC and CM, respectively, as first primary cancers. Risk of PC incidence increased following CM diagnosis (n = 2,114; SIR = 1.25; 95% CI:1.20.8-1.31: p < 0.0001), with the increased risk apparent in men diagnosed with localised CM (n = 1,862;SIR = 1.26; 95% CI:1.20–1.32). CM diagnosis increased the subsequent risk of PC incidence. This raises the potential for future PC risk to be discussed with newly diagnosed males with CM.
Effects of 5-aminolevulinic acid supplementation on home-based walking training achievement in middle-aged depressive women: randomized, double-blind, crossover pilot study
Authors: Suzuki Hiroshi , Masuki Shizue , Morikawa Akiyo , Ogawa Yu , Kamijo Yoshi-ichiro , Takahashi Kiwamu , Nakajima Motowo , Nose Hiroshi 
Published: May 2018

AbstractDepressive patients often experience difficulty in performing exercise due to physical and psychological barriers. We examined the effects of 5-aminolevulinic acid (ALA) with sodium ferrous citrate (SFC) supplementation during home-based walking training in middle-aged depressive women. Nine outpatients [53 ± 8 (SD) yr] with major depressive disorder participated in the pilot study with randomized, placebo-controlled, double-blind crossover design. They underwent two trials for 7 days, each performing interval walking training (IWT) with ALA + SFC (ALA + SFC) or placebo supplement intake (PLC) intermittently with >a 10-day washout period. For the first 6 days of each trial, exercise intensity for IWT was measured by accelerometry. Before and after each trial, subjects underwent a graded cycling test, and lactate concentration in plasma ([Lac−]p), oxygen consumption rate ($${\dot{{\bf{V}}}{\bf{O}}}_{{\bf{2}}}$$V˙O2), and carbon dioxide production rate ($${\dot{{\bf{V}}}{\bf{\text{CO}}}}_{{\bf{2}}}$$V˙CO2) were measured with depression severity by the Montgomery–Åsberg Depression Rating Scale (MADRS). We found that the increases in [Lac−]p,$${\dot{{\bf{V}}}{\bf{O}}}_{{\bf{2}}}$$V˙O2and$${\dot{{\bf{V}}}{\bf{\text{CO}}}}_{{\bf{2}}}$$V˙CO2during the test were attenuated only in ALA + SFC ([before vs. after] × workload; all, P < 0.01), accompanied by increased training days, impulse, and time at fast walking during IWT (all, P < 0.05) with decreased MADRS-score (P = 0.001). Thus, ALA + SFC supplementation increased IWT achievement to improve depressive symptoms in middle-aged women.
Rock Physical Controls on Production-induced Compaction in the Groningen Field
Authors: Hol Sander , van der Linden Arjan , Bierman Stijn , Marcelis Fons , Makurat Axel 
Published: May 2018

AbstractAdvancing production from the Groningen gas field to full depletion generates substantial, field-scale deformation, and surface subsidence. Quantifying associated risk requires understanding physical processes in the subsurface, in particular those related to deformation of the Permian sandstone reservoir. Here, we report the results of a large experimental study, using fresh core material taken from the center of the field. By subjecting the material to depletion and slight unloading, complemented with a range of rock property measurements, we determine what rock physical properties control production-induced compaction in the material. Our results show that, although a large part of the deformation can be explained by classical linear poroelasticity, the contribution of inelastic (permanent) deformation is also significant. In fact, it increases with progressing pressure depletion, i.e. with increasing production. Utilizing univariate and multivariate statistical methods, we explain the additional inelastic deformation by direct effects of porosity, packing, and mineral composition. These proxies are in turn related to the depositional setting of the Permian reservoir. Our findings suggest that field-scale subsidence may not only be related to the often-used rock porosity, but also to packing, and composition, hence the local depositional environment. This motivates alternative assessments of human-induced mechanical effects in sedimentary systems.
Feasibility and safety of using local anaesthesia with conscious sedation during complex cardiac implantable electronic device procedures
Authors: Kaya Elif , Südkamp Hendrik , Lortz Julia , Rassaf Tienush , Jánosi Rolf Alexander 
Published: May 2018

AbstractWe assessed the feasibility and safety of using local anaesthesia with conscious sedation as an alternative to general anaesthesia during complex and noncomplex cardiac implantable device procedures. We enrolled 279 consecutive patients who underwent cardiac device implantation/replacement at our tertiary/quaternary cardiac specialist hospital during a 17-month study period. Continuous combined intravenous conscious sedation with propofol and midazolam plus fentanyl and local anaesthesia were used for all procedures. Among the patients, 113, 59, 43, and 64 patients underwent pacemaker implantation, implantable cardiac defibrillator implantation, cardiac resynchronisation therapy device implantation, and generator exchange, respectively. The procedural success rate was 100%, with no apnoea or hypoxia episodes requiring therapeutic intervention. None of the patients required conversion to general anaesthesia. The mean surgical duration was longer for complex vs. noncomplex procedures (p = 0.003). The minimum mean arterial pressure during complex procedures was slightly lower than that during noncomplex procedures (p = 0.03). The perioperative (<24 h) mortality rate was 0%, and neither complexity group required tracheal intubation. Only two patients (0.7%) required unplanned intensive care unit admission for further surveillance. Our findings suggest that local anaesthesia with conscious sedation is a safe and feasible option for cardiac device implantation procedures, including complex procedures.
Magnetic resonance probing of ground state in the mixed valence correlated topological insulator SmB6
Authors: Demishev S. V. , Gilmanov M. I. , Samarin A. N. , Semeno A. V. , Sluchanko N. E. , Samarin N. A. , Bogach A. V. , Shitsevalova N. Yu. , Filipov V. B. , Karasev M. S. , Glushkov V. V. 
Published: May 2018

AbstractIntroducing of topological insulator concept for fluctuating valence compound – samarium hexaboride – has recently initiated a new round of studies aimed to clarify the nature of the ground state in this extraordinary system with strong electron correlations. Here we discuss the data of magnetic resonance in the pristine single crystals of SmB6 measured in 60 GHz cavity experiments at temperatures 1.8–300 K. The microwave study as well as the DC resistivity and Hall effect measurements performed for the different states of SmB6 [110] surface prove definitely the existence of the layer with metallic conductivity increasing under lowering temperature below 5 K. Four lines with the g-factors g ≈ 2 are found to contribute to the ESR-like absorption spectrum that may be attributed to intrinsic paramagnetic centers on the sample’s surface, which are robust with respect to the surface treatment. The temperature dependence of integrated intensity I(T) for main paramagnetic signal is found to demonstrate anomalous critical behavior I(T) ~ (T* − T)ν with characteristic temperature T
*
= 5.34 ± 0.05 K and exponent ν = 0.38 ± 0.03 indicating possible magnetic transition at the SmB6 [110] surface. Additional resonant magnetoabsorption line, which may be associated with either donor-like defects or cyclotron resonance mode corresponding to the mass m
c
~ 1.2m0, is reported.
Isotropic Backward Waves Supported by a Spiral Array Metasurface
Authors: Tremain Ben , Hooper Ian R. , Sambles J. Roy , Hibbins Alastair P. 
Published: May 2018

AbstractA planar metallic metasurface formed of spiral elements is shown to support an isotropic backward wave over a narrow band of microwave frequencies. The magnetic field of this left-handed mode is mapped experimentally using a near-field scanning technique, allowing the anti-parallel group and phase velocities to be directly visualised. The corresponding dispersion relation and isofrequency contours are obtained through Fourier transformation of the field images.
Electrostatic quantum dots in silicene
Authors: Szafran B. , Żebrowski D. , Mreńca-Kolasińska Alina 
Published: May 2018

AbstractWe study electrostatic quantum dot confinement for charge carriers in silicene. The confinement is formed by vertical electric field surrounding the quantum dot area. The resulting energy gap in the outside of the quantum dot traps the carriers within, and the difference of electrostatic potentials on the buckled silicene sublattices produces nonzero carrier masses outside the quantum dot. We study the electrostatic confinement defined inside a silicene flake with both the atomistic tight-binding approach as well as with the continuum approximation for a circularly symmetric electrostatic potential. We find localization of the states within the quantum dot and their decoupling from the edge that makes the spectrum of the localized states independent of the crystal termination. For an armchair edge of the flake removal of the intervalley scattering by the electrostatic confinement is found.
The polymorphism rs6918289 located in the downstream region of the TREM2 gene is associated with TNF-α levels and IMT-F
Authors: Gorenjak Vesna , Aldasoro Arguinano Alex-Ander , Dadé Sébastien , Stathopoulou Maria G. , Vance Dwaine R. , Masson Christine , Visvikis-Siest Sophie 
Published: May 2018

AbstractTriggering receptor expressed on myeloid cells 2 (TREM2) is known for its anti-inflammatory properties during the immune response, and influences negatively on TNF-α expression levels. Genetic epidemiology studies have identified polymorphisms located in the TREM2 gene associated with neurodegenerative and chronic inflammatory diseases. TREM2 levels have been observed to affect plasma levels of TNF-α and plaque stability in symptomatic and asymptomatic patients with carotid stenosis. In this study, we investigated polymorphisms located in the TREM2 gene region and association with TNF-α levels and the intima media thickness of the femoral artery. The discovery population from the STANISLAS Family Study comprised of 809 individuals, whereas the replication population utilized an independent cohort of French origin (n = 916). Our results suggest that the minor allele (T) of SNP rs6918289 is positively associated with elevated plasma levels of TNF-α in discovery and replication populations (P = 0.0026, SE = 0.04 and P = 0.023, SE = 0.09, respectively), including femoral artery thickness in the discovery cohort (P = 0.026, SE = 0.009). Results indicate that rs6918289 may be considered as a risk factor for inflammatory diseases and could be used in stratified medicine with patients diagnosed with chronic inflammatory-related conditions, such as atherosclerosis.
Similar but separate systems underlie perceptual bistability in vision and audition
Authors: Denham Susan L. , Farkas Dávid , van Ee Raymond , Taranu Mihaela , Kocsis Zsuzsanna , Wimmer Marina , Carmel David , Winkler István 
Published: May 2018

AbstractThe dynamics of perceptual bistability, the phenomenon in which perception switches between different interpretations of an unchanging stimulus, are characterised by very similar properties across a wide range of qualitatively different paradigms. This suggests that perceptual switching may be triggered by some common source. However, it is also possible that perceptual switching may arise from a distributed system, whose components vary according to the specifics of the perceptual experiences involved. Here we used a visual and an auditory task to determine whether individuals show cross-modal commonalities in perceptual switching. We found that individual perceptual switching rates were significantly correlated across modalities. We then asked whether perceptual switching arises from some central (modality-) task-independent process or from a more distributed task-specific system. We found that a log-normal distribution best explained the distribution of perceptual phases in both modalities, suggestive of a combined set of independent processes causing perceptual switching. Modality- and/or task-dependent differences in these distributions, and lack of correlation with the modality-independent central factors tested (ego-resiliency, creativity, and executive function), also point towards perceptual switching arising from a distributed system of similar but independent processes.
Grain number responses to pre-anthesis dry matter and nitrogen in improving wheat yield in the Huang-Huai Plain
Authors: Duan Jianzhao , Wu Yapeng , Zhou Yi , Ren Xingxu , Shao Yunhui , Feng Wei , Zhu Yunji , Wang Yonghua , Guo Tiancai 
Published: May 2018

AbstractWheat yield components vary between different ecological regions and yield levels. Grain number responses to pre-anthesis dry matter (DM) and nitrogen (N) in increasing yield were always investigated in spike organs, neglecting the effect of non-spike organ nutrition or overall distribution. This paper determined the relationships between grain number and pre-anthesis DM and N in spike and non-spike organs under different yield levels, with using two sorts of field experiments (different water-nitrogen modes and cultivation management patterns) from 2012–2015 in Huang-Huai plain. The results indicated that improving yield under yield of <7500 kg ha−1 depends on increasing grain number per spike (GNs) or spike number (SN) or both, increased yield under higher yield of >7500 kg ha−1 mainly depends on GNs. GNs showed significant positive relationships with above-ground DM accumulation from jointing to anthesis under high or low yield levels. Rapid DM growth in spring achieves higher GNs. Spike and non-spike DM and N contents both demonstrated strong positive relationships with GNs, spike DM distribution also shows a positive correlation, but spike N distribution ratio show negatively correlation with GNs. Improved N distribution in non-spike organs and DM partition in spike organs conduce to increasing GNs.