bluuebunny/crossref_metadata_2025_split huggingface dataset:
Antagonistic chemical coupling in self-reconfigurable host–guest protocells
Authors: Martin Nicolas , Douliez Jean-Paul , Qiao Yan , Booth Richard , Li Mei , Mann Stephen 
Published: September 2018

AbstractFabrication of compartmentalised chemical systems with nested architectures and biomimetic properties has important implications for controlling the positional assembly of functional components, spatiotemporal regulation of enzyme cascades and modelling of proto-organelle behaviour in synthetic protocells. Here, we describe the spontaneous capture of glucose oxidase-containing proteinosomes in pH-sensitive fatty acid micelle coacervate droplets as a facile route to multi-compartmentalised host–guest protocells capable of antagonistic chemical and structural coupling. The nested system functions co-operatively at low-substrate turnover, while high levels of glucose give rise to pH-induced disassembly of the droplets, release of the incarcerated proteinosomes and self-reconfiguration into spatially organised enzymatically active vesicle-in-proteinosome protocells. Co-encapsulation of antagonistic enzymes within the proteinosomes produces a sequence of self-induced capture and host–guest reconfiguration. Taken together, our results highlight opportunities for the fabrication of self-reconfigurable host–guest protocells and provide a step towards the development of protocell populations exhibiting both synergistic and antagonistic modes of interaction.
Potential role of the HOXD8 transcription factor in cisplatin resistance and tumour metastasis in advanced epithelial ovarian cancer
Authors: Sun PengMing , Song YiYi , Liu DaBin , Liu GuiFen , Mao XiaoDan , Dong BinHua , Braicu Elena Ioana , Sehouli Jalid 
Published: September 2018

AbstractFew studies have examined the potential transcription factor (TF) simultaneously associated with cisplatin resistance and metastasis in ovarian cancer. To assess a related mechanism, a 345-channel protein/DNA array and transcriptional activity ELISA were performed to compare the TF activities in the cisplatin-sensitive SKOV3 and cisplatin-resistant SKOV3-DDP cells and in HO-8910 and the homologous highly metastatic HO-8910PM cells. In SKOV3-DDP vs. SKOV3 cells, 43 TFs were up-regulated, while 31 were down-regulated. In HO-8910PM vs. HO-8910 cells, 13 TFs were up-regulated, while 18 were down-regulated. In these two models, 4 TFs (HOXD8(1), HOXD8(2), RB, RFX1/2/3) were simultaneously up-regulated, and 9 TFs (SRE, FKHR, Angiotensinogen ANG-IRE, Pax2, CD28RC/NF-IL2B, HLF, CPE, CBFB and c-Ets-1) were down-regulated. HOXD8 mRNA and protein expression levels measured by reverse transcription polymerase chain reaction and ELISA, respectively, were significantly higher in SKOV3-DDP and HO-8910PM than in their corresponding cell lines (both p < 0.05). In 52 cases of different ovarian disease, the patients with recurrent and cisplatin-resistant ovarian cancer had higher expression levels of HOXD8 than patients with primary malignant tumours (p = 0.018, p = 0.001) or benign tumours (p = 0.001, p < 0.001). Taken together, these results suggest that HOXD8 is potentially associated with both cisplatin resistance and metastasis in advanced ovarian cancer.
Novel analgesic ω-conotoxins from the vermivorous cone snail Conus moncuri provide new insights into the evolution of conopeptides
Authors: Sousa Silmara R. , McArthur Jeffrey R. , Brust Andreas , Bhola Rebecca F. , Rosengren K. Johan , Ragnarsson Lotten , Dutertre Sebastien , Alewood Paul F. , Christie Macdonald J. , Adams David J. , Vetter Irina , Lewis Richard J. 
Published: September 2018

AbstractCone snails are a diverse group of predatory marine invertebrates that deploy remarkably complex venoms to rapidly paralyse worm, mollusc or fish prey. ω-Conotoxins are neurotoxic peptides from cone snail venoms that inhibit Cav2.2 voltage-gated calcium channel, demonstrating potential for pain management via intrathecal (IT) administration. Here, we isolated and characterized two novel ω-conotoxins, MoVIA and MoVIB from Conus moncuri, the first to be identified in vermivorous (worm-hunting) cone snails. MoVIA and MoVIB potently inhibited human Cav2.2 in fluorimetric assays and rat Cav2.2 in patch clamp studies, and both potently displaced radiolabeled ω-conotoxin GVIA (125I-GVIA) from human SH-SY5Y cells and fish brain membranes (IC50 2–9 pM). Intriguingly, an arginine at position 13 in MoVIA and MoVIB replaced the functionally critical tyrosine found in piscivorous ω-conotoxins. To investigate its role, we synthesized MoVIB-[R13Y] and MVIIA-[Y13R]. Interestingly, MVIIA-[Y13R] completely lost Cav2.2 activity and MoVIB-[R13Y] had reduced activity, indicating that Arg at position 13 was preferred in these vermivorous ω-conotoxins whereas tyrosine 13 is preferred in piscivorous ω-conotoxins. MoVIB reversed pain behavior in a rat neuropathic pain model, confirming that vermivorous cone snails are a new source of analgesic ω-conotoxins. Given vermivorous cone snails are ancestral to piscivorous species, our findings support the repurposing of defensive venom peptides in the evolution of piscivorous Conidae.
Pancreatic Exocrine Tissue Architecture and Integrity are Maintained by E-cadherin During Postnatal Development
Authors: Serrill Jeffrey D. , Sander Maike , Shih Hung Ping 
Published: September 2018

AbstractCadherin-mediated cell-cell adhesion plays an important role in organ development and changes in cadherin expression are often linked to morphogenetic and pathogenic events. Cadherins interact with other intracellular components to form adherens junctions (AJs) and provide mechanical attachments between adjacent cells. E-cadherin (Cdh1) represents an integral component of these intercellular junctions. To elucidate the function of E-cadherin in the developing pancreas, we generated and studied pancreas-specific Cdh1-knockout (Cdh1ΔPan/ΔPan) mice. Cdh1ΔPan/ΔPan mice exhibit normal body size at birth, but fail to gain weight and become hypoglycemic soon afterward. We found that E-cadherin is not required for the establishment of apical-basal polarity or pancreatic exocrine cell identity at birth. However, four days after birth, the pancreata of Cdh1ΔPan/ΔPan mutants display progressive deterioration of exocrine architecture and dysregulation of Wnt and YAP signaling. At this time point, the acinar cells of Cdh1ΔPan/ΔPan mutants begin to exhibit ductal phenotypes, suggesting acinar-to-ductal metaplasia (ADM) in the E-cadherin-deficient pancreas. Our findings demonstrate that E-cadherin plays an integral role in the maintenance of exocrine architecture and regulation of homeostatic signaling. The present study provides insights into the involvement of cadherin-mediated cell-cell adhesion in pathogenic conditions such as pancreatitis or pancreatic cancer.
Accurate sound localization behavior in a gleaning bat, Antrozous pallidus
Authors: Brewton Dustin , Gutierrez Victoria , Razak Khaleel A 
Published: September 2018

AbstractAcute auditory processing in bats is typically associated with echolocation. A subset of bats, called gleaners, listens to prey-generated noise to hunt surface-dwelling prey. Gleaners depend less on echolocation to hunt and, therefore, accurate localization of prey-generated noise is necessary for foraging success. Here we studied azimuth sound localization behavior in the pallid bat, a gleaning bat in which spatial encoding has been studied extensively. We tested pallid bats on a relatively difficult open loop task (single sound, duration ≤ 200 ms). The bats were trained to face the midline when stimulus was presented, and this was confirmed with video analysis. Bats localized broadband noise (5–30 kHz) from 1 out of 11 speakers spaced evenly across the horizontal plane of the frontal sound field. Approach to the correct speaker was rewarded. Pallid bats show accurate localization near the midline with mean errors between 3–6°. Remarkably, the accuracy does not decline significantly at peripheral locations with bats averaging  <~7° error upto 72° off midline. Manipulation of stimulus bandwidth shows that higher frequencies (20–30 kHz) are necessary for accurate localization. Comparative studies of gleaning bats will reveal convergent adaptations across auditory systems for non-echolocation-based behaviors in bats.
Parameter-Free Multiscale Simulation Realising Quantitative Prediction of Hole and Electron Mobilities in Organic Amorphous System with Multiple Frontier Orbitals
Authors: Kubo Shosei , Kaji Hironori 
Published: September 2018

AbstractIn amorphous organic semiconducting systems, hole and electron transfer has been considered to occur based on the overlap of highest occupied molecular orbitals (HOMOs) and that of lowest unoccupied molecular orbitals (LUMOs) between two adjacent molecules, respectively. Other molecular orbitals (MOs), HOMO−1, HOMO−2, … and LUMO+1, LUMO+2, …, have been neglected in charge transport calculations. However, these MOs could potentially contribute to charge transport. In this study, our multiscale simulations show that carriers are effectively transported not only via HOMOs or LUMOs but also via other MOs when the MOs are close in energy. Because these multiple MOs are active in charge transports, here we call them multiple frontier orbitals. Molecules with multiple frontier orbitals are found to possess high carrier mobility. The findings in this study provide guidelines to aid design of materials with excellent charge transport properties.
Warming in the Agulhas Region during the Global Surface Warming Acceleration and Slowdown
Authors: Han Lu , Yan Xiao-Hai 
Published: September 2018

AbstractThe Agulhas Region gains more heat during the global surface warming slowdown than acceleration period. Yet, mechanisms that cause excessive heat accumulation in this region remain largely unknown. We investigate the underlying physical processes and examine their influence on ocean heat changes in the last three decades. Heave is found to drive the increasing ocean heat content in the last three decades whereas elevated heat accumulation rate in slowdown compared than acceleration period is mainly attributed to spice. During the acceleration period, pure heaving of Subtropical Mode Water induced by wind stress change and pure warming caused by heat flux, leading to a strong heave component and relatively weak spice, drive the increases in ocean heat content. During the slowdown period, increasing salinity strengthens the spice, resulting in a higher heat accumulation rate compared to the acceleration period.
Neuronal network maturation differently affects secretory vesicles and mitochondria transport in axons
Authors: Moutaux Eve , Christaller Wilhelm , Scaramuzzino Chiara , Genoux Aurélie , Charlot Benoit , Cazorla Maxime , Saudou Frédéric 
Published: September 2018

AbstractStudying intracellular dynamics in neurons is crucial to better understand how brain circuits communicate and adapt to environmental changes. In neurons, axonal secretory vesicles underlie various functions from growth during development to plasticity in the mature brain. Similarly, transport of mitochondria, the power plant of the cell, regulates both axonal development and synaptic homeostasis. However, because of their submicrometric size and rapid velocities, studying the kinetics of these organelles in projecting axons in vivo is technically challenging. In parallel, primary neuronal cultures are adapted to study axonal transport but they lack the physiological organization of neuronal networks, which in turn may bias observations. We previously developed a microfluidic platform to reconstruct a physiologically-relevant and functional corticostriatal network in vitro that is compatible with high-resolution videorecording of axonal trafficking. Here, using this system we report progressive changes in axonal transport kinetics of both dense core vesicles and mitochondria that correlate with network development and maturation. Interestingly, axonal flow of both types of organelles change in opposite directions, with rates increasing for vesicles and decreasing for mitochondria. Overall, our observations highlight the need for a better spatiotemporal control for the study of intracellular dynamics in order to avoid misinterpretations and improve reproducibility.
Scaling up electrically synchronized spin torque oscillator networks
Authors: Tsunegi Sumito , Taniguchi Tomohiro , Lebrun Romain , Yakushiji Kay , Cros Vincent , Grollier Julie , Fukushima Akio , Yuasa Shinji , Kubota Hitoshi 
Published: September 2018

AbstractSynchronized nonlinear oscillators networks are at the core of numerous families of applications including phased array wave generators and neuromorphic pattern matching systems. In these devices, stable synchronization between large numbers of nanoscale oscillators is a key issue that remains to be demonstrated. Here, we show experimentally that synchronized spin-torque oscillator networks can be scaled up. By increasing the number of synchronized oscillators up to eight, we obtain that the emitted power and the quality factor increase linearly with the number of oscillators. Even more importantly, we demonstrate that the stability of synchronization in time exceeds 1.6 milliseconds corresponding to 105 periods of oscillation. Our study demonstrates that spin-torque oscillators are suitable for applications based on synchronized networks of oscillators.
Characterisation and functional predictions of canine long non-coding RNAs
Authors: Le Béguec Céline , Wucher Valentin , Lagoutte Lætitia , Cadieu Edouard , Botherel Nadine , Hédan Benoît , De Brito Clotilde , Guillory Anne-Sophie , André Catherine , Derrien Thomas , Hitte Christophe 
Published: September 2018

AbstractLong non-coding RNAs (lncRNAs) are a family of heterogeneous RNAs that play major roles in multiple biological processes. We recently identified an extended repertoire of more than 10,000 lncRNAs of the domestic dog however, predicting their biological functionality remains challenging. In this study, we have characterised the expression profiles of 10,444 canine lncRNAs in 26 distinct tissue types, representing various anatomical systems. We showed that lncRNA expressions are mainly clustered by tissue type and we highlighted that 44% of canine lncRNAs are expressed in a tissue-specific manner. We further demonstrated that tissue-specificity correlates with specific families of canine transposable elements. In addition, we identified more than 900 conserved dog-human lncRNAs for which we show their overall reproducible expression patterns between dog and human through comparative transcriptomics. Finally, co-expression analyses of lncRNA and neighbouring protein-coding genes identified more than 3,400 canine lncRNAs, suggesting that functional roles of these lncRNAs act as regulatory elements. Altogether, this genomic and transcriptomic integrative study of lncRNAs constitutes a major resource to investigate genotype to phenotype relationships and biomedical research in the dog species.
Using high-throughput sequencing to investigate the factors structuring genomic variation of a Mediterranean grasshopper of great conservation concern
Authors: González-Serna María José , Cordero Pedro J. , Ortego Joaquín 
Published: September 2018

AbstractInferring the demographic history of species is fundamental for understanding their responses to past climate/landscape alterations and improving our predictions about the future impacts of the different components of ongoing global change. Estimating the time-frame at which population fragmentation took place is also critical to determine whether such process was shaped by ancient events (e.g. past climate/geological changes) or if, conversely, it was driven by recent human activities (e.g. habitat loss). We employed genomic data (ddRAD-Seq) to determine the factors shaping contemporary patterns of genetic variation in the Iberian cross-backed grasshopperDociostaurus crassiusculus, an endangered species with limited dispersal capacity and narrow habitat requirements. Our analyses indicate the presence of two ancient lineages and three genetic clusters resulted from historical processes of population fragmentation (~18–126 ka) that predate the Anthropocene. Landscape genetic analyses indicate that the limits of major river basins are the main geographical feature explaining large-scale patterns of genomic differentiation, with no apparent effect of human-driven habitat fragmentation. Overall, our study highlights the importance of detailed phylogeographic, demographic and spatially-explicit landscape analyses to identify evolutionary significant units and determine the relative impact of historicalvs. anthropogenic factors on processes of genetic fragmentation in taxa of great conservation concern.
Clinical evaluation of rapid fluorescent diagnostic immunochromatographic test for influenza A virus (H1N1)
Authors: Yu Seung-Taek , Thi Bui Cuc , Kim Do Thi Hoang , V. T. Nguyen Anh , Thi Trinh Thuy Tien , Yeo Seon-Ju 
Published: September 2018

AbstractRapid diagnostic tests (RDTs) have been developed to detect influenza A virus for the swift diagnosis and management of patients. However, despite the simplicity and convenience, the low sensitivity of RDTs remains a limitation for their use in point of care testing (POCT). In this study, we developed a rapid fluorescent immunochromatographic strip test (FICT) and the performance of FICT was confirmed by the real-time reverse transcription-polymerase chain reaction (rRT-PCR) of H1N1, compared with that of RDT. The limit of detection (LOD) of FICT was improved by 16-fold compared to RDT. FICT showed 85.29% sensitivity (29/34) (95% Confidence Interval [95% CI]: 68.94 to 95.05), 100% specificity (26/26) (95% CI: 86.78 to 100.00), and a strong correlation (kappa; 0. 92) compared with rRT-PCR (20 ≤ Ct ≤ 36). In contrast, RDT (Standard Diagnostics [SD] BIOLINE Influenza Ag A/ B/ A(H1N1) Pandemic) showed 55.88% sensitivity (19/34) (95% CI: 37.87 to 72.82), 100% specificity (26/26) (95% CI: 77.07 to 100), and had a fair correlation with rRT-PCR (kappa; 0. 75). FICT had better sensitivity than RDT (P < 0.01; McNemar’s test). Therefore, FICT has the potential to improve the quality of current rapid POCT for the diagnosis of influenza A/H1N1 infection.
Maximum blink interval is associated with tear film breakup time: A new simple, screening test for dry eye disease
Authors: Inomata Takenori , Iwagami Masao , Hiratsuka Yoshimune , Fujimoto Keiichi , Okumura Yuichi , Shiang Tina , Murakami Akira 
Published: September 2018

AbstractThe prevalence of dry eye disease (DED) is increasing worldwide, and its diagnosis often needs dedicated reagents and machines. We investigated the usefulness of maximum blink interval (MBI) (the length of time that participants could keep their eyes open) in screening for DED. This cross-sectional study included 292 patients (194 with DED and 98 without DED) recruited between September 2016 and September 2017. We compared the MBI between patients with and without DED; examined correlations between MBI and other clinical features of DED, including subjective symptoms (Dry Eye-Related Quality-of-Life Score), tear film breakup time (TFBUT), cornea fluorescence score (CFS), and Schirmer test I value; and determined the optimal cutoff value of MBI to suspect DED using a receiver operating characteristic (ROC) analysis. The MBI was significantly shortened in DED group compared to the non-DED group (10.0 ± 9.1 vs. 24.3 ± 38.2 seconds, p < 0.001). TFBUT was strongly positively correlated with MBI (r = 0.464), whereas CFS was negatively correlated with MBI (r = −0.273). The area under the ROC curve was 0.677, and the optimal MBI cutoff value was 12.4 seconds, providing a sensitivity of 82.5% and specificity of 51.0% to suspect DED. In conclusion, MBI may be a simple, useful test for screening DED.
A new sauropodiform dinosaur with a ‘sauropodan’ skull from the Lower Jurassic Lufeng Formation of Yunnan Province, China
Authors: Zhang Qian-Nan , You Hai-Lu , Wang Tao , Chatterjee Sankar 
Published: September 2018

AbstractThe Early Jurassic Lufeng Formation of Yunnan Province in southwestern China is one of the best fossil localities in the world for understanding the early radiation of sauropodomorph dinosaurs. It has yielded a rich assemblage of complete and three-dimensionally preserved skeletons of herbivorous dinosaurs that provide crucial morphological information for systematic and evolutionary studies. Here we describe a new taxon, Yizhousaurus sunae gen. et sp. nov., represented by a nearly complete skeleton with an exquisitely preserved skull and mandible. Yizhousaurus is distinguished from other non-sauropodan sauropodomorphs by a unique combination of plesiomorphic and apomorphic features, which increases our understanding of the anatomical variation on the relatively conservative ‘prosauropod’ cranial plan. Phylogenetic analysis resolves Yizhousaurus as a sauropodiform, showcasing a mosaic character suite combining plesiomorphic states in the postcranial skeleton with some more ‘sauropodan’-like features in the skull. Furthermore, Yizhousaurus is placed closer to the base of Sauropoda than other non-sauropodan sauropodomorphs currently known from the Lufeng Formation, adding another taxon to enrich the Lower Jurassic Lufeng dinosaur fauna.
Technical and economic efficiency of reinforced concrete elements with different types of reinforcement
Authors: Efimenko Ekaterina , Mailyan Liya , Muradyan Viktor 
Published: September 2018

The article presents data on the bearing capacity of columns with various combinations of prestressed and conventional reinforcement. The areas of the most effective use of such structures with different eccentricities and flexibilities are shown. The ecology of reinforcement steel is an important task that the designers of reinforced concrete structures face. The creation of effective constructive solutions, that allow to combine high technical characteristics with economic use of reinforcement steel, has become urgent and is necessary for today's development of the construction industry.
In the works [1,2,3,4,5] it was shown that the solution of these problems was possible by creating conditions for the full employment of building materials properties - reinforcement and concrete.
The working reinforcement is characterized by its application in the conventional and prestretched forms. At the same time, the works done in the recent years show that reinforcement, subjected to precompression, can be used in the compressed zone [6,7,8].
It is most effective in rigid reinforced concrete columns. Thus, precompression of all longitudinal reinforcement or its part allows to increase the strength of non-flexible columns with not high relative eccentricities of the external longitudinal force. At the same time, in order to obtain the greatest effect caused by the precompression of the reinforcement, certain conditions must be observed.