bluuebunny/crossref_metadata_2025_split huggingface dataset:
Increased activation product of complement 4 protein in plasma of individuals with schizophrenia
Authors: Kalinowski Agnieszka , Liliental Joanna , Anker Lauren A. , Linkovski Omer , Culbertson Collin , Hall Jacob N. , Pattni Reenal , Sabatti Chiara , Noordsy Douglas , Hallmayer Joachim F. , Mellins Elizabeth D. , Ballon Jacob S. , O’Hara Ruth , Levinson Douglas F. , Urban Alexander E. 
Published: September 2021

AbstractStructural variation in the complement 4 gene (C4) confers genetic risk for schizophrenia. The variation includes numbers of the increased C4A copy number, which predicts increased C4A mRNA expression. C4-anaphylatoxin (C4-ana) is a C4 protein fragment released upon C4 protein activation that has the potential to change the blood–brain barrier (BBB). We hypothesized that elevated plasma levels of C4-ana occur in individuals with schizophrenia (iSCZ). Blood was collected from 15 iSCZ with illness duration < 5 years and from 14 healthy controls (HC). Plasma C4-ana was measured by radioimmunoassay. Other complement activation products C3-ana, C5-ana, and terminal complement complex (TCC) were also measured. Digital-droplet PCR was used to determine C4 gene structural variation state. Recombinant C4-ana was added to primary brain endothelial cells (BEC) and permeability was measured in vitro. C4-ana concentration was elevated in plasma from iSCZ compared to HC (mean = 654 ± 16 ng/mL, 557 ± 94 respectively, p = 0.01). The patients also carried more copies of the C4AL gene and demonstrated a positive correlation between plasma C4-ana concentrations and C4A gene copy number. Furthermore, C4-ana increased the permeability of a monolayer of BEC in vitro. Our findings are consistent with a specific role for C4A protein in schizophrenia and raise the possibility that its activation product, C4-ana, increases BBB permeability. Exploratory analyses suggest the novel hypothesis that the relationship between C4-ana levels and C4A gene copy number could also be altered in iSCZ, suggesting an interaction with unknown genetic and/or environmental risk factors.
Arsenic compound sensitizes homologous recombination proficient ovarian cancer to PARP inhibitors
Authors: Xu Junfen , Shen Yuanming , Wang Conghui , Tang Sangsang , Hong Shiyuan , Lu Weiguo , Xie Xing , Cheng Xiaodong 
Published: September 2021

AbstractThe poly(adenosine diphosphate-ribose) polymerase (PARP) inhibitors show survival benefits in ovarian cancer patients withBRCA1/2mutation or homologous recombination (HR) deficiency, but only limited efficacy in HR-proficient ones. Another drug, arsenic trioxide (ATO) or arsenic drug (RIF), exerts antitumor effects via inducing DNA damage. Here, we investigated the combined therapeutic effects of the PARP inhibitors and the arsenic compound in HR-proficient ovarian cancer. The combined treatment of niraparib, olaparib, or fluazolepali with ATO showed a significant suppression in tumor cell viability and colony formation. The drug treatment also induced synergistic inhibition of cell proliferation and DNA damage, and acceleration of cell apoptosis in two HR-proficient ovarian cancer cell lines SKOV3 and CAOV3, either by simultaneous or sequential administration. The mechanism underlying these synergistic effects were reflected by the significantly increased ratio of cleaved-PARP/total PARP and decreased ratio of p-AKT/total AKT. Consistently, the combination of olaparib with RIF synergistically reduced the tumor growth in mouse xenograft models. In conclusion, the arsenic compound greatly sensitizes HR-proficient ovarian cancer cells to the PARP inhibitors, and our findings provide an evidence for the clinical treatment development of this combination in HR-proficient ovarian cancer patients.
Super-enhancer-based identification of a BATF3/IL-2R−module reveals vulnerabilities in anaplastic large cell lymphoma
Authors: Liang Huan-Chang , Costanza Mariantonia , Prutsch Nicole , Zimmerman Mark W. , Gurnhofer Elisabeth , Montes-Mojarro Ivonne A. , Abraham Brian J. , Prokoph Nina , Stoiber Stefan , Tangermann Simone , Lobello Cosimo , Oppelt Jan , Anagnostopoulos Ioannis , Hielscher Thomas , Pervez Shahid , Klapper Wolfram , Zammarchi Francesca , Silva Daniel-Adriano , Garcia K. Christopher , Baker David , Janz Martin , Schleussner Nikolai , Fend Falko , Pospíšilová Šárka , Janiková Andrea , Wallwitz Jacqueline , Stoiber Dagmar , Simonitsch-Klupp Ingrid , Cerroni Lorenzo , Pileri Stefano , de Leval Laurence , Sibon David , Fataccioli Virginie , Gaulard Philippe , Assaf Chalid , Knörr Fabian , Damm-Welk Christine , Woessmann Wilhelm , Turner Suzanne D. , Look A. Thomas , Mathas Stephan , Kenner Lukas , Merkel Olaf 
Published: September 2021

AbstractAnaplastic large cell lymphoma (ALCL), an aggressive CD30-positive T-cell lymphoma, comprises systemic anaplastic lymphoma kinase (ALK)-positive, and ALK-negative, primary cutaneous and breast implant-associated ALCL. Prognosis of some ALCL subgroups is still unsatisfactory, and already in second line effective treatment options are lacking. To identify genes defining ALCL cell state and dependencies, we here characterize super-enhancer regions by genome-wide H3K27ac ChIP-seq. In addition to known ALCL key regulators, the AP-1-memberBATF3andIL-2 receptor(IL2R)-components are among the top hits. Specific and high-level IL2R expression in ALCL correlates with BATF3 expression. Confirming a regulatory link, IL-2R-expression decreases followingBATF3knockout, and BATF3 is recruited toIL2Rregulatory regions. Functionally, IL-2, IL-15 and Neo-2/15, a hyper-stable IL-2/IL-15 mimic, accelerate ALCL growth and activate STAT1, STAT5 and ERK1/2. In line, strong IL-2Rα-expression in ALCL patients is linked to more aggressive clinical presentation. Finally, an IL-2Rα-targeting antibody-drug conjugate efficiently kills ALCL cells in vitro and in vivo. Our results highlight the importance of the BATF3/IL-2R-module for ALCL biology and identify IL-2Rα-targeting as a promising treatment strategy for ALCL.
A potent SARS-CoV-2 neutralising nanobody shows therapeutic efficacy in the Syrian golden hamster model of COVID-19
Authors: Huo Jiandong , Mikolajek Halina , Le Bas Audrey , Clark Jordan J. , Sharma Parul , Kipar Anja , Dormon Joshua , Norman Chelsea , Weckener Miriam , Clare Daniel K. , Harrison Peter J. , Tree Julia A. , Buttigieg Karen R. , Salguero Francisco J. , Watson Robert , Knott Daniel , Carnell Oliver , Ngabo Didier , Elmore Michael J. , Fotheringham Susan , Harding Adam , Moynié Lucile , Ward Philip N. , Dumoux Maud , Prince Tessa , Hall Yper , Hiscox Julian A. , Owen Andrew , James William , Carroll Miles W. , Stewart James P. , Naismith James H. , Owens Raymond J. 
Published: September 2021

AbstractSARS-CoV-2 remains a global threat to human health particularly as escape mutants emerge. There is an unmet need for effective treatments against COVID-19 for which neutralizing single domain antibodies (nanobodies) have significant potential. Their small size and stability mean that nanobodies are compatible with respiratory administration. We report four nanobodies (C5, H3, C1, F2) engineered as homotrimers with pmolar affinity for the receptor binding domain (RBD) of the SARS-CoV-2 spike protein. Crystal structures show C5 and H3 overlap the ACE2 epitope, whilst C1 and F2 bind to a different epitope. Cryo Electron Microscopy shows C5 binding results in an all down arrangement of the Spike protein. C1, H3 and C5 all neutralize the Victoria strain, and the highly transmissible Alpha (B.1.1.7 first identified in Kent, UK) strain and C1 also neutralizes the Beta (B.1.35, first identified in South Africa). Administration of C5-trimer via the respiratory route showed potent therapeutic efficacy in the Syrian hamster model of COVID-19 and separately, effective prophylaxis. The molecule was similarly potent by intraperitoneal injection.
Isotopic evolution of planetary crusts by hypervelocity impacts evidenced by Fe in microtektites
Authors: Chernonozhkin S. M. , González de Vega C. , Artemieva N. , Soens B. , Belza J. , Bolea-Fernandez E. , Van Ginneken M. , Glass B. P. , Folco L. , Genge M. J. , Claeys Ph. , Vanhaecke F. , Goderis S. 
Published: September 2021

AbstractFractionation effects related to evaporation and condensation had a major impact on the current elemental and isotopic composition of the Solar System. Although isotopic fractionation of moderately volatile elements has been observed in tektites due to impact heating, the exact nature of the processes taking place during hypervelocity impacts remains poorly understood. By studying Fe in microtektites, here we show that impact events do not simply lead to melting, melt expulsion and evaporation, but involve a convoluted sequence of processes including condensation, variable degrees of mixing between isotopically distinct reservoirs and ablative evaporation during atmospheric re-entry. Hypervelocity impacts can as such not only generate isotopically heavy, but also isotopically light ejecta, with δ56/54Fe spanning over nearly 5‰ and likely even larger variations for more volatile elements. The mechanisms demonstrated here for terrestrial impact ejecta modify our understanding of the effects of impact processing on the isotopic evolution of planetary crusts.
On-chip terahertz isolator with ultrahigh isolation ratios
Authors: Yuan Shixing , Chen Liao , Wang Ziwei , Deng Wentao , Hou Zhibo , Zhang Chi , Yu Yu , Wu Xiaojun , Zhang Xinliang 
Published: September 2021

AbstractTerahertz isolators, one of the typical nonreciprocal devices that can break Lorentz reciprocity, are indispensable building blocks in terahertz systems for their critical functionality of manipulating the terahertz flow. Here, we report an integrated terahertz isolator based on the magneto-optical effect of a nonreciprocal resonator. By optimizing the magneto-optical property and the loss of the resonator, we experimentally observe unidirectional propagation with an ultrahigh isolation ratio reaching up to 52 dB and an insertion loss around 7.5 dB at ~0.47 THz. With a thermal tuning method and periodic resonances, the isolator can operate at different central frequencies in the range of 0.405–0.495 THz. This on-chip terahertz isolator will not only inspire more solutions for integrated terahertz nonreciprocal devices, but also have the feasibility for practical applications such as terahertz sensing and reducing unnecessary reflections in terahertz systems.
Sterols are required for the coordinated assembly of lipid droplets in developing seeds
Authors: Yu Linhui , Fan Jilian , Zhou Chao , Xu Changcheng 
Published: September 2021

AbstractLipid droplets (LDs) are intracellular organelles critical for energy storage and lipid metabolism. They are typically composed of an oil core coated by a monolayer of phospholipids and proteins such as oleosins. The mechanistic details of LD biogenesis remain poorly defined. However, emerging evidence suggest that their formation is a spatiotemporally regulated process, occurring at specific sites of the endoplasmic reticulum defined by a specific set of lipids and proteins. Here, we show that sterols are required for formation of oleosin-coated LDs in Arabidopsis. Analysis of sterol pathway mutants revealed that deficiency in several ∆5-sterols accounts for the phenotype. Importantly, mutants deficient in these sterols also display reduced LD number, increased LD size and reduced oil content in seeds. Collectively, our data reveal a role of sterols in coordinating the synthesis of oil and oleosins and their assembly into LDs, highlighting the importance of membrane lipids in regulating LD biogenesis.
Rapid detection of pesticide in milk, cereal and cereal based food and fruit juices using paper strip-based sensor
Authors: Dasriya Vaishali , Joshi Ritu , Ranveer Soniya , Dhundale Vishal , Kumar Naresh , Raghu H. V. 
Published: September 2021

AbstractThe study was aimed to validate paper strip sensors for the detection of pesticide residues in milk, cereal-based food, and fruit juices in comparison with GC–MS/MS under field conditions. The detection limit of pesticide using rapid paper strip sensor for organophosphate, carbamate, organochlorine, fungicide, and herbicide group ranges from 1 to 10, 1–50, 250–500, 1–50, and 1 ppb, respectively in milk and milk product, cereal-based food and fruit juices. Among 125 samples of milk samples collected from the market 33 milk samples comprising 31 raw milk and 2 pasteurized milk found positive for pesticide using the strip-based sensor. In cereal based food and fruit juice samples, 6 cereal flours and 4 fruit juices were found positive for pesticide residues. The pesticide positive samples were further evaluated quantitatively using GC–MS/MS wherein 7 samples comprised of raw milk, pasteurized milk, rice flour, wheat flour, maize flour, apple juice, and pomegranate juice have shown the presence of chlorpyrifos, chlorpyrifos-methyl, α-endosulfan, β-endosulfan DDD and DDT at trace level as well as at above MRL level. It is envisaged that the developed paper strip sensor can be a potential tool in the rapid and cost-effective screening of a large number of food samples for pesticide residues.
Magnitude of nitrate turbulent diffusion in contrasting marine environments
Authors: Mouriño-Carballido Beatriz , Otero Ferrer José Luis , Fernández Castro Bieito , Marañón Emilio , Blazquez Maseda Mariña , Aguiar-González Borja , Chouciño Paloma , Graña Rocío , Moreira-Coello Víctor , Villamaña Marina 
Published: September 2021

AbstractDifficulties to quantify ocean turbulence have limited our knowledge about the magnitude and variability of nitrate turbulent diffusion, which constitutes one of the main processes responsible for the supply of nitrogen to phytoplankton inhabiting the euphotic zone. We use an extensive dataset of microturbulence observations collected in contrasting oceanic regions, to build a model for nitrate diffusion into the euphotic zone, and obtain the first global map for the distribution of this process. A model including two predictors (surface temperature and nitrate vertical gradient) explained 50% of the variance in the nitrate diffusive flux. This model was applied to climatological data to predict nitrate diffusion in oligotrophic mid and low latitude regions. Mean nitrate diffusion (~ 20 Tmol N y−1) was comparable to nitrate entrainment due to seasonal mixed-layer deepening between 40°N–40ºS, and to the sum of global estimates of nitrogen fixation, fluvial fluxes and atmospheric deposition. These results indicate that nitrate diffusion represents one of the major sources of new nitrogen into the surface ocean in these regions.
Food resources affect territoriality of invasive wild pig sounders with implications for control
Authors: Kilgo John C. , Garabedian James E. , Vukovich Mark , Schlichting Peter E. , Byrne Michael E. , Beasley James C. 
Published: September 2021

AbstractInterest in control methods for invasive wild pigs (Sus scrofa) has increased due to their range expansion, population growth, and an improved understanding of their destructive ecological and economic effects. Recent technological advances in traps for control of pig populations facilitate capture of entire social groups (sounders), but the efficacy of “whole-sounder” trapping strategies is heavily dependent on the degree of territoriality among sounders, a topic little research has explored. We assessed territoriality in wild pig sounders on the Savannah River Site, South Carolina, USA, and examined whether availability of food resources provided by a municipal-waste landfill affected among-sounder territoriality. We estimated utilization distribution overlap and dynamic interactions among 18 neighboring sounders around a landfill. We found that although neighboring sounders overlapped in space, intensity of use in shared areas was uniformly low, indicating territorial behavior. Neighbors tended to share slightly more space when closer to the landfill waste cells, indicating availability of a super-abundant resource somewhat weakens the degree of territoriality among sounders. Nevertheless, we conclude that sounders behaved in a generally territorial manner, and we discuss implications for whole-sounder trapping programs, particularly near concentrated resources such as landfills and crop fields.
Probiotics maintain the gut microbiome homeostasis during Indian Antarctic expedition by ship
Authors: Srivastava Ashish Kumar , Rohil Vishwajeet , Bhushan Brij , Eslavath Malleswara Rao , Gupta Harshita , Chanda Sudipta , Kumar Bhuvnesh , Varshney Rajeev , Ganju Lilly 
Published: September 2021

AbstractShip voyage to Antarctica is a stressful journey for expedition members. The response of human gut microbiota to ship voyage and a feasible approach to maintain gut health, is still unexplored. The present findings describe a 24-day long longitudinal study involving 19 members from 38th Indian Antarctic Expedition, to investigate the impact of ship voyage and effect of probiotic intervention on gut microbiota. Fecal samples collected on day 0 as baseline and at the end of ship voyage (day 24), were analyzed using whole genome shotgun sequencing. Probiotic intervention reduced the sea sickness by 10% compared to 44% in placebo group. The gut microbiome in placebo group members on day 0 and day 24, indicated significant alteration compared to a marginal change in the microbial composition in probiotic group. Functional analysis revealed significant alterations in carbohydrate and amino acid metabolism. Carbohydrate-active enzymes analysis represented functional genes involved in glycoside hydrolases, glycosyltransferases and carbohydrate binding modules, for maintaining gut microbiome homeostasis. Suggesting thereby the possible mechanism of probiotic in stabilizing and restoring gut microflora during stressful ship journey. The present study is first of its kind, providing a feasible approach for protecting gut health during Antarctic expedition involving ship voyage.
Local photoreceptor cell death differences in the murine model of retinal detachment
Authors: Maidana Daniel E. , Gonzalez-Buendia Lucia , Miller Joan W. , Vavvas Demetrios G. 
Published: September 2021

AbstractTo investigate local cell death differences in the attached and detached retina at different regions in a murine experimental retinal detachment model. Subretinal injection of sodium hyaluronate was performed in eight-week-old C57BL/6J mice. Retinal regions of interest were defined in relation to their distance from the peak of the retinal detachment, as follows: (1) attached central; (2) attached paracentral; (3) detached apex; and (4) detached base. At day 0, the outer nuclear layer cell count for the attached central, attached paracentral, detached apex, and detached base was 1247.60 ± 64.62, 1157.80 ± 163.33, 1264.00 ± 150.7, and 1013.80 ± 67.16 cells, respectively. There were significant differences between the detached base vs. attached central, and between detached base vs. detached apex at day 0. The detached apex region displayed a significant and progressive cell count reduction from day 0 to 14. In contrast, the detached base region did not show progressive retinal degeneration in this model. Moreover, only the detached apex region had a significant and progressive cell death rate compared to baseline. Immediate confounding changes with dramatic differences in cell death rates are present across regions of the detached retina. We speculate that mechanical and regional differences in the bullous detached retina can modify the rate of cell death in this model.
Prognostic value of prostate volume in non-muscle invasive bladder cancer
Authors: Ham Won Sik , Park Jee Soo , Jang Won Sik , Choi Young Deuk , Kim Jongchan 
Published: September 2021

AbstractThere is evidence that a history of benign prostatic hyperplasia increases the incidence of bladder cancer, and treatment with 5-alpha reductase inhibitor or androgen deprivation therapy reduces recurrence of non-muscle invasive bladder cancer. We aimed to evaluate whether prostate volume affects its prognosis. We reviewed medical records of men who underwent transurethral resection of bladder tumor due to non-muscle invasive bladder cancer from January 2012 to December 2017. Patients were divided into two groups based on prostate volume measured by computed tomography (group 1: 264 patients with ≤ 30 mL, group 2: 124 patients with > 30 mL). Propensity score matching analysis was used for adjust selection bias, and then assessed recurrence-free survival and progression-free survival. With a median follow up duration of 52 months, group 1 showed higher 5-year recurrence-free and progression-free survival (69.3% vs 47.0%, p = 0.001; 96.7% vs 87.7%, p = 0.002). Further, cox-regression analysis showed that tumor size (HR = 1.292 p < 0.001), multifocal tumor (HR = 1.993, p < 0.001), adjuvant intravesical therapy (chemotherapy: HR = 0.580, p = 0.037 and bacillus Calmette–Guérin: HR = 0.542, p = 0.004) and prostate volume (HR = 2.326, p < 0.001) were significant predictors of recurrence-free survival. Prostate volume (HR = 2.886, p = 0.014) was also associated with PFS with age (HR = 1.043, p = 0.044) and tumor grade (HR = 3.822, p = 0.013). We conclude higher prostate volume is associated with worse recurrence and progression-free survival in non-muscle invasive bladder cancer.
The efficiency of nano-TiO2 and γ-Al2O3 in copper removal from aqueous solution by characterization and adsorption study
Authors: Ezati Fatemeh , Sepehr Ebrahim , Ahmadi Fatemeh 
Published: September 2021

AbstractWater pollution is a major global challenge given the increasing growth in the industry and the human population. The present study aims to investigate the efficiency of TiO2 and γ-Al2O3 nanoadsorbents for removal of copper (Cu(II)) from aqueous solution as influenced by different chemical factors including pH, initial concentration, background electrolyte and, ionic strength. The batch adsorption experiment was performed according to standard experimental methods. Various isotherm models (Freundlich, Langmuir, Temkin, and Dubinin–Radushkevich) were fitted to the equilibrium data. According to geochemical modeling data, adsorption was a predominant mechanism for Cu(II) removal from aqueous solution. Calculated isotherm equations parameters were evidence of the physical adsorption mechanism of Cu(II) onto the surface of the nanoparticles. The Freundlich adsorption isotherm model could well fit the experimental equilibrium data at different pH values. The maximum monolayer adsorption capacity of TiO2 and γ-Al2O3 nanosorbents were found to 9288 and 3607 mg kg−1 at the highest pH value (pH 8) and the highest initial Cu(II) concentration (80 mg L−1) respectively. Copper )Cu(II) (removal efficiency with TiO2 and γ-Al2O3 nanoparticles increased by increasing pH. Copper )Cu(II) (adsorption deceased by increasing ionic strength. The maximum Cu(II) adsorption (4510 mg kg−1) with TiO2 nanoparticles was found at 0.01 M ionic strength in the presence of NaCl. Thermodynamic calculations show the adsorption of Cu(II) ions onto the nanoparticles was spontaneous in nature. Titanium oxide (TiO2) nanosorbents could, therefore, serve as an efficient and low-cost nanomaterial for the remediation of Cu(II) ions polluted aqueous solutions.