bluuebunny/crossref_metadata_2025_split huggingface dataset:
Rhesus monkeys as a translational model for late‐onset Alzheimer's disease
Authors: Souder Dylan C. , Dreischmeier Isabelle A. , Smith Alex B. , Wright Samantha , Martin Stephen A. , Sagar Md Abdul Kader , Eliceiri Kevin W. , Salamat Shahriar M. , Bendlin Barbara B. , Colman Ricki J. , Beasley T. Mark , Anderson Rozalyn M. 
Published: May 2021

AbstractAge is a major risk factor for late‐onset Alzheimer's disease (AD) but seldom features in laboratory models of the disease. Furthermore, heterogeneity in size and density of AD plaques observed in individuals are not recapitulated in transgenic mouse models, presenting an incomplete picture. We show that the amyloid plaque microenvironment is not equivalent between rodent and primate species, and that differences in the impact of AD pathology on local metabolism and inflammation might explain established differences in neurodegeneration and functional decline. Using brain tissue from transgenic APP/PSEN1 mice, rhesus monkeys with age‐related amyloid plaques, and human subjects with confirmed AD, we report altered energetics in the plaque microenvironment. Metabolic features included changes in mitochondrial distribution and enzymatic activity, and changes in redox cofactors NAD(P)H that were shared among species. A greater burden of lipofuscin was detected in the brains from monkeys and humans of advanced age compared to transgenic mice. Local inflammatory signatures indexed by astrogliosis and microglial activation were detected in each species; however, the inflamed zone was considerably larger for monkeys and humans. These data demonstrate the advantage of nonhuman primates in modeling the plaque microenvironment, and provide a new framework to investigate how AD pathology might contribute to functional loss.
Structural correlates of sensorimotor dysfunction in heavy cannabis users
Authors: Wolf Robert Christian , Werler Florian , Wittemann Miriam , Schmitgen Mike M. , Kubera Katharina M. , Wolf Nadine D. , Reith Wolfgang , Hirjak Dusan 
Published: May 2021

AbstractSensorimotor dysfunction has been previously reported in persons with cannabis dependence. Such individuals can exhibit increased levels of neurological soft signs (NSS), particularly involving motor coordination and sensorimotor integration. Whether such abnormalities may also apply to non‐dependent individuals with heavy cannabis use (HCU) is unknown, as much as the neural correlates underlying such deficits. In this study, we investigated associations between NSS and gray matter volume (GMV) in males with HCU and male controls. Twenty‐four persons with HCU and 17 controls were examined using standardized assessment of NSS and structural magnetic resonance imaging (MRI) at 3 T. GMV was calculated using voxel‐based morphometry algorithms provided by the Computational Anatomy Toolbox (CAT12). Individuals with HCU showed higher NSS total scores compared to controls. In particular, significant NSS‐subdomain effects were found for “motor coordination” (MoCo), “complex motor tasks” (CoMT), and “hard signs” (HS) expression in HCU (p < 0.05, Bonferroni‐corrected). Compared to controls, persons with HCU showed significant NSS/GMV interactions in putamen and inferior frontal cortex (MoCo), right cerebellum (CoMT) and middle and superior frontal cortices, and bilateral precentral cortex and thalamus (HS). In between‐group analyses, individuals with HCU showed lower GMV in the right anterior orbital and precentral gyrus, as well as higher GMV in the right superior frontal gyrus and left supplementary motor cortex compared to controls. The data support the notion of abnormal sensorimotor performance associated with HCU. The data also provide a neuromechanistic understanding of such deficits, particularly with respect to aberrant cortical–thalamic–cerebellar–cortical circuit.
Individual differences in the engagement of habitual control over alcohol seeking predict the development of compulsive alcohol seeking and drinking
Authors: Giuliano Chiara , Puaud Mickaël , Cardinal Rudolf N. , Belin David , Everitt Barry J. 
Published: May 2021

AbstractExcessive drinking is an important behavioural characteristic of alcohol addiction, but not the only one. Individuals addicted to alcohol crave alcoholic beverages, spend time seeking alcohol despite negative consequences and eventually drink to intoxication. With prolonged use, control over alcohol seeking devolves to anterior dorsolateral striatum, dopamine‐dependent mechanisms implicated in habit learning and individuals in whom alcohol seeking relies more on these mechanisms are more likely to persist in seeking alcohol despite the risk of punishment. Here, we tested the hypothesis that the development of habitual alcohol seeking predicts the development of compulsive seeking and that, once developed, it is associated with compulsive alcohol drinking. Male alcohol‐preferring rats were pre‐exposed intermittently to a two‐bottle choice procedure and trained on a seeking–taking chained schedule of alcohol reinforcement until some individuals developed punishment‐resistant seeking behaviour. The associative basis of their seeking responses was probed with an outcome‐devaluation procedure, early or late in training. After seeking behaviour was well established, subjects that had developed greater resistance to outcome devaluation (were more habitual) were more likely to show punishment‐resistant (compulsive) alcohol seeking. These individuals also drank more alcohol, despite quinine adulteration, even though having similar alcohol preference and intake before and during instrumental training. They were also less sensitive to changes in the contingency between seeking responses and alcohol outcome, providing further evidence of recruitment of the habit system. We therefore provide direct behavioural evidence that compulsive alcohol seeking emerges alongside compulsive drinking in individuals who have preferentially engaged the habit system.
Penile inversion vaginoplasty outcomes: Complications and satisfaction
Authors: Hontscharuk Rayisa , Alba Brandon , Hamidian Jahromi Alireza , Schechter Loren 
Published: May 2021

AbstractPenile inversion vaginoplasty helps to alleviate gender dysphoria and improve quality of life in many transgender individuals. Overall, the procedure is associated with high post‐operative satisfaction, even when complications occur. Adverse events related to vaginoplasty are commensurate with other genitourinary reconstructive procedures performed for other diagnoses (ie, cancer or congenital issues). Here, we explore the incidence of complications following vaginoplasty, emphasizing the challenges in defining and managing these adverse events. In addition, outcome measures to assess patient satisfaction will be reviewed.
Viral hepatitis in haemophilia: historical perspective and current management
Authors: Isfordink Cas J. , van Erpecum Karel J. , van der Valk Marc , Mauser‐Bunschoten Evelien P. , Makris Michael 
Published: May 2021

SummaryThe introduction of clotting factor concentrates has substantially improved the lives of people with clotting factor deficiencies. Unfortunately, the transmission of blood‐borne viral infections through these plasma‐derived products led to a huge epidemic of human immunodeficiency virus and viral hepatitis in people with haemophilia (PWH). In a significant proportion of PWH exposed to these viruses, the ensuing decades‐long chronic infection resulted in excess morbidity and mortality. Fortunately, developments in the safety of blood products, as well as vaccination and highly effective antiviral treatments have improved the prospects of PWH. The present article reviews the background of the viral hepatitis epidemic in PWH, the natural history of hepatitis B and C infections and their long‐term management.
Myelodysplastic syndrome patients display alterations in their immune status reflected by increased PD‐L1‐expressing stem cells and highly dynamic exhausted T‐cell frequencies
Authors: Moskorz Wiebke , Cosmovici Christine , Jäger Paul S. , Cadeddu Ron P. , Timm Jörg , Haas Rainer 
Published: May 2021

SummaryLittle data are available for the expression of immune checkpoint (IC) molecules within myelodysplastic syndrome (MDS). Here, we report increased PD‐L1+CD34+CD38− and PD‐L1+CD34+CD38+ stem cell frequencies within MDS patients compared to stem cell recipients in remission. Additionally, we observed exceedingly similar PD1+ and Tim‐3+ T‐cell frequencies between acute myeloid leukaemia (AML) and MDS samples that were elevated compared to patients in remission. Furthermore, we found highly dynamic Tim‐3+ and PD1+ T‐cell frequencies within serial samples of relapsing MDS with excess blasts (MDS‐EB II) patients, correlating with further disease markers. These findings support the idea of a potential successful implementation of IC inhibitor treatment in suitable MDS patients.
Aquatic and terrestrial proxy evidence for Middle Pleistocene palaeolake and lake‐shore development at two Lower Palaeolithic sites of Schöningen, Germany
Authors: Krahn Kim J. , Tucci Mario , Urban Brigitte , Pilgrim Julien , Frenzel Peter , Soulié‐Märsche Ingeborg , Schwalb Antje 
Published: May 2021

The archaeological sites in the open‐cast mine of Schöningen, Germany, represent outstanding archives for understanding Middle Pleistocene interglacial–glacial transitions and human adaption. Aquatic microfossil and pollen assemblages from the ‘Reinsdorf sequence’, likely correlated to Marine Isotope Stage 9, document environmental changes from a thermal maximum to succeeding glacial conditions recorded in two sequences of excavation sites 12 II and 13 II. Multi‐proxy analyses enable detailed reconstruction of lake‐shore and landscape developments despite variable microfossil preservation in changing carbonate‐ and organic‐rich deposits. Rich aquatic vegetation with abundant charophytes suggests repeated phases with water depths of 0.5–2 m at site 13 II, while even greater temporary depths are deduced for 12 II DB. Mesorheophilic and mesotitanophilic ostracod species indicate stream inflows with medium–low calcium contents of >18 mg Ca L–1 originating from nearby springs. Diatoms point to meso‐eutrophic conditions and an alkaline pH of the lake water. Interglacial conditions with thermophile forests but no aquatic microfossils preserved, suggesting a dry or only temporarily flooded site, mark the beginning of the sequence. Continuous presence of aquatic organisms and overall dominance of small tychoplanktonic diatoms during a subsequent cool steppe phase provide evidence for increased water depths and unstable habitats characterized by erosion and probably prolonged periods of lake ice cover. During the succeeding boreal forest‐steppe phase, surface runoff into the productive, shallow lake decreased due to a more extensive vegetation cover. Concurrently, intensified groundwater input in contact with the nearby salt wall caused elevated salinities. Following a lake level drop, stream inflows and lake levels increased again towards the end of the Reinsdorf sequence and promoted development of a diverse fauna and flora at the lake shore; thereby maintaining an attractive living and hunting environment for early humans during a phase of generally cooler temperatures and landscape instability at the transition into a glacial period.
The seven ways eukaryotes produce repeated colour motifs on external tissues
Authors: Galipot Pierre , Damerval Catherine , Jabbour Florian 
Published: May 2021

ABSTRACTThe external tissues of numerous eukaryote species show repeated colour patterns, usually characterized by units that are present at least twice on the body. These dotted, striped or more complex phenotypes carry out crucial biological functions, such as partner recognition, aposematism or camouflage. Very diverse mechanisms explaining the formation of repeated colour patterns in eukaryotes have been identified and described, and it is timely to review this field from an evolutionary and developmental biology perspective. We propose a novel classification consisting of seven families of primary mechanisms: Turing(‐like), cellular automaton, multi‐induction, physical cracking, random, neuromuscular and printing. In addition, we report six pattern modifiers, acting synergistically with these primary mechanisms to enhance the spectrum of repeated colour patterns. We discuss the limitations of our classification in light of currently unexplored extant diversity. As repeated colour patterns require both the production of a repetitive structure and colouration, we also discuss the nature of the links between these two processes. A more complete understanding of the formation of repeated colour patterns in eukaryotes will require (i) a deeper exploration of biological diversity, tackling the issue of pattern elaboration during the development of non‐model taxa, and (ii) exploring some of the most promising ways to discover new families of mechanisms. Good starting points include evaluating the role of mechanisms known to produce non‐repeated colour patterns and that of mechanisms responsible for repeated spatial patterns lacking colouration.
Weight loss with bariatric surgery or behaviour modification and the impact on female obesity‐related urine incontinence: A comprehensive systematic review and meta‐analysis
Authors: Sheridan William , Da Silva Ana Sofia , Leca Bianca M , Ostarijas Eduard , Patel Ameet G , Aylwin Simon JB , Vincent Royce P , Panagiotopoulos Spyros , El‐Hasani Shamsi , le Roux Carel W , Miras Alexander D , Cardozo Linda , Dimitriadis Georgios K 
Published: May 2021

SummaryWomen with obesity are at risk of pelvic floor dysfunction with a 3‐fold increased incidence of urge urinary incontinence (UUI) and double the risk of stress urinary incontinence (SUI). The National Institute for Health and Care Excellence (NICE) and European Association of Urology (EAU) recommend that women with a body mass index ≥30 kg/m2 should consider weight loss prior to consideration for incontinence surgery. This systematic review and meta‐analysis will assess this recommendation to aid in the counselling of women with obesity‐related urinary incontinence (UI). Medical Literature Analysis and Retrieval System online (MEDLINE), EMBASE, Cochrane, ClinicalTrials.gov, and SCOPUS were systematically and critically appraised for all peer reviewed manuscripts that suitably fulfilled the inclusion criteria established a priori and presented original, empirical data relevant to weight loss intervention in the management of urinary incontinence. Thirty‐three studies and their outcomes were meta‐analysed. Weight loss interventions were associated in a decreased prevalence in UI (OR 0.222, 95% CI [0.147, 0.336]), SUI (OR 0.354, 95% CI [0.256, 0.489]), UUI (OR 0.437, 95% CI [0.295, 0.649]) and improved quality of life (PFDI‐20, SMD ‐0.774 (95% CI [−1.236, −0.312]). This systematic review and meta‐analysis provide evidence that weight loss interventions are effective in reducing the prevalence of obesity‐related UI symptoms in women. Bariatric surgery in particular shows greater sustained weight loss and improvements in UI prevalence. Further large scale, randomized control trials assessing the effect of bariatric surgery on women with obesity‐related UI are needed to confirm this study's findings.
Environmental DNA metabarcoding as a tool for biodiversity assessment and monitoring: reconstructing established fish communities of north‐temperate lakes and rivers
Authors: Euclide Peter T. , Lor Yer , Spear Michael J. , Tajjioui Tariq , Vander Zanden Jake , Larson Wesley A. , Amberg Jon J. 
Published: May 2021

AbstractAimTo evaluate the ability of precipitation‐based environmental DNA (eDNA) sample collection and mitochondrial 12S metabarcoding sequencing to reconstruct well‐studied fish communities in lakes and rivers. Specific objectives were to 1) determine correlations between eDNA species detections and known community composition based on conventional field sampling, 2) compare efficiency of eDNA to detect fish biodiversity among systems with variable morphologies and trophic states, and 3) determine if species habitat preferences predict eDNA detection.LocationUpper Great Lakes Region, North America.MethodsFish community composition was estimated for seven lakes and two Mississippi River navigation pools using sequence data from the mitochondrial 12S gene amplified from 10 to 50 water samples per waterbody collected in 50‐mL centrifuge tubes at a single time point. Environmental DNA (eDNA) was concentrated without filtration by centrifuging samples to reduce per‐sample handling time. Taxonomic detections from eDNA were compared to established community monitoring databases containing up to 40 years of sampling and a detailed habitat/substrate preference matrix to identify patterns of bias.ResultsMitochondrial 12S gene metabarcoding detected 15%–47% of the known species at each waterbody and 30%–76% of known genera. Non‐metric multidimensional scaling (NMDS) assessment of the community structure indicated that eDNA‐detected communities grouped in a similar pattern as known communities. Discriminant analysis of principal components indicated that there was a high degree of overlap in habitat/substrate preference of eDNA‐detected and eDNA‐undetected species suggesting limited habitat bias for eDNA sampling.Main conclusionsLarge numbers of small volume samples sequenced at the mitochondrial 12S gene can describe the coarse community structure of freshwater systems. However, additional conventional sampling and environmental DNA sampling may be necessary for a complete diversity census.
Pyrodiversity and biodiversity: A history, synthesis, and outlook
Authors: Jones Gavin M. , Tingley Morgan W. 
Published: May 2021

AbstractAimPyrodiversity is the spatial or temporal variability in fire effects across a landscape. Multiple ecological hypotheses, when applied to the context of post‐fire systems, suggest that high pyrodiversity will lead to high biodiversity. This resultant “pyrodiversity–biodiversity” hypothesis has grown popular but has received mixed support by recent empirical research. In this paper, we sought to review the existing pyrodiversity literature, appraise support for the pyrodiversity–biodiversity hypothesis, examine potential mechanisms underlying the hypothesis and identify outstanding questions about pyrodiversity and future research needs.LocationGlobal terrestrial ecosystems.MethodsWe performed a systematic literature review of research related to pyrodiversity and the pyrodiversity–biodiversity hypothesis. We also examined how two individual species with distinct relationships with fire (spotted owl Strix occidentalis and black‐backed woodpecker Picoides arcticus) respond to pyrodiversity as case studies to illustrate underlying mechanisms.ResultsWe identified 41 tests of the pyrodiversity–biodiversity hypothesis reported from 33 studies; 18 (44%) presented evidence in support of the pyrodiversity–biodiversity hypothesis, while 23 (56%) did not. Our literature review suggested that support for the pyrodiversity–biodiversity hypothesis varies considerably with no consistent patterns across taxonomic groups and ecosystem types. Studies examining the pyrodiversity–biodiversity hypothesis often define pyrodiversity in different ways, examine effects at different scales and are conducted in ecosystems with different natural fire regimes, baseline levels of biodiversity, and evolutionary histories. We suggest these factors independently and jointly have led to widely varying support for the pyrodiversity–biodiversity hypothesis.Main ConclusionsClarifying the pyrodiversity–biodiversity hypothesis will be facilitated by stronger development of the different potential mechanisms underlying pyrodiversity–biodiversity relationships, which can be aided by examining how individual species respond to pyrodiversity. Future research would benefit from a closer examination of the role of scale (e.g. scale dependence) in pyrodiversity–biodiversity relationships, standardization of pyrodiversity metrics, broad‐scale mapping of pyrodiversity, and macroecological study of pyrodiversity–biodiversity relationships.
Responding to the biodiversity impacts of a megafire: A case study from south‐eastern Australia’s Black Summer
Authors: Geary William L. , Buchan Anne , Allen Teigan , Attard David , Bruce Matthew J. , Collins Luke , Ecker Tiarne E. , Fairman Thomas A. , Hollings Tracey , Loeffler Ella , Muscatello Angela , Parkes David , Thomson Jim , White Matt , Kelly Ella 
Published: May 2021

AbstractAimMegafires are increasing in intensity and frequency globally. The impacts of megafires on biodiversity can be severe, so conservation managers must be able to respond rapidly to quantify their impacts, initiate recovery efforts and consider conservation options within and beyond the burned extent. We outline a framework that can be used to guide conservation responses to megafires, using the 1.5 million hectare 2019/2020 megafires in Victoria, Australia, as a case study.LocationVictoria, Australia.MethodsOur framework uses a suite of decision support tools, including species attribute databases, ~4,200 species distribution models and a spatially explicit conservation action planning tool to quantify the potential effects of megafires on biodiversity, and identify species‐specific and landscape‐scale conservation actions that can assist recovery.ResultsOur approach identified 346 species in Victoria that had >40% of their modelled habitat affected by the megafire, including 45 threatened species, and 102 species with >40% of their modelled habitat affected by high severity fire. We then identified 21 candidate recovery actions that are expected to assist the recovery of biodiversity. For relevant landscape‐scale actions, we identified locations within and adjacent to the megafire extent that are expected to deliver cost‐effective conservation gains.Main conclusionThe 2019/2020 megafires in south‐eastern Australia affected the habitat of many species and plant communities. Our framework identified a range of single‐species (e.g., supplementary feeding, translocation) and landscape‐scale actions (e.g., protection of refuges, invasive species management) that can help biodiversity recover from megafires. Conservation managers will be increasingly required to rapidly identify conservation actions that can help species recover from megafires, especially under a changing climate. Our approach brings together commonly used datasets (e.g., species distribution maps, trait databases, fire severity mapping) to help guide conservation responses and can be used to help biodiversity recover from future megafires across the world.