bluuebunny/crossref_metadata_2025_split huggingface dataset:
Longitudinal profiling of the burn patient cutaneous and gastrointestinal microbiota: a pilot study
Authors: Lima Kelly M. , Davis Ryan R. , Liu Stephenie Y. , Greenhalgh David G. , Tran Nam K. 
Published: May 2021

AbstractSepsis is a leading cause of morbidity and mortality in patients that have sustained a severe burn injury. Early detection and treatment of infections improves outcomes and understanding changes in the host microbiome following injury and during treatment may aid in burn care. The loss of functional barriers, systemic inflammation, and commensal community perturbations all contribute to a burn patient’s increased risk of infection. We sampled 10 burn patients to evaluate cutaneous microbial populations on the burn wound and corresponding spared skin on days 0, 3, 7, 14, 21, and 28 post-intensive care unit admission. In addition, skin samples were paired with perianal and rectal locations to evaluate changes in the burn patient gut microbiome following injury and treatment. We found significant (P = 0.011) reduction in alpha diversity on the burn wound compared to spared skin throughout the sampling period as well as reduction in common skin commensal bacteria such as Propionibacterium acnes and Staphylococcus epidermitis. Compared to healthy volunteers (n = 18), the burn patient spared skin also exhibited a significant reduction in alpha diversity (P = 0.001). Treatments such as systemic or topical antibiotic administration, skin grafting, and nutritional formulations also impact diversity and community composition at the sampling locations. When evaluating each subject individually, an increase in relative abundance of taxa isolated clinically by bacterial culture could be seen in 5/9 infections detected among the burn patient cohort.
The TGF-β ligand DBL-1 is a key player in a multifaceted probiotic protection against MRSA in C. elegans
Authors: Mørch Maria G. M. , Møller Katrine V. , Hesselager Marianne O. , Harders Rikke H. , Kidmose Caroline L. , Buhl Therese , Fuursted Kurt , Bendixen Emøke , Shen Chong , Christensen Lotte G. , Poulsen Charlotte H. , Olsen Anders 
Published: May 2021

AbstractWorldwide the increase in multi-resistant bacteria due to misuse of traditional antibiotics is a growing threat for our health. Finding alternatives to traditional antibiotics is thus timely. Probiotic bacteria have numerous beneficial effects and could offer safer alternatives to traditional antibiotics. Here, we use the nematodeCaenorhabditis elegans(C. elegans) to screen a library of different lactobacilli to identify potential probiotic bacteria and characterize their mechanisms of action. We show that pretreatment with theLactobacillusspp. Lb21 increases lifespan ofC. elegansand results in resistance towards pathogenic methicillin-resistantStaphylococcus aureus(MRSA).Using genetic analysis, we find that Lb21-mediated MRSA resistance is dependent on the DBL-1 ligand of the TGF-β signaling pathway inC. elegans. This response is evolutionarily conserved as we find that Lb21 also induces the TGF-β pathway in porcine epithelial cells. We further characterize the host responses in an unbiased proteome analysis and identify 474 proteins regulated in worms fed Lb21 compared to control food. These include fatty acid CoA synthetase ACS-22, aspartic protease ASP-6 and vitellogenin VIT-2 which are important for Lb21-mediated MRSA resistance. Thus, Lb21 exerts its probiotic effect onC. elegansin a multifactorial manner. In summary, our study establishes a mechanistic basis for the antimicrobial potential of lactobacilli.
Antagonism between brain regions relevant for cognitive control and emotional memory facilitates the generation of humorous ideas
Authors: Bitsch Florian , Berger Philipp , Fink Andreas , Nagels Arne , Straube Benjamin , Falkenberg Irina 
Published: May 2021

AbstractThe ability to generate humor gives rise to positive emotions and thus facilitate the successful resolution of adversity. Although there is consensus that inhibitory processes might be related to broaden the way of thinking, the neural underpinnings of these mechanisms are largely unknown. Here, we use functional Magnetic Resonance Imaging, a humorous alternative uses task and a stroop task, to investigate the brain mechanisms underlying the emergence of humorous ideas in 24 subjects. Neuroimaging results indicate that greater cognitive control abilities are associated with increased activation in the amygdala, the hippocampus and the superior and medial frontal gyrus during the generation of humorous ideas. Examining the neural mechanisms more closely shows that the hypoactivation of frontal brain regions is associated with an hyperactivation in the amygdala and vice versa. This antagonistic connectivity is concurrently linked with an increased number of humorous ideas and enhanced amygdala responses during the task. Our data therefore suggests that a neural antagonism previously related to the emergence and regulation of negative affective responses, is linked with the generation of emotionally positive ideas and may represent an important neural pathway supporting mental health.
Electro-optical measurement of intense electric field on a high energy pulsed power accelerator
Authors: Owens Israel , Grabowski Chris , Biller Andrew , Ulmen Ben , Joseph Nathan , Hughes Ben , Coffey Sean , Kirschner Debra , Struve Ken 
Published: May 2021

AbstractWe describe a direct electro-optical approach to measuring a strong 118 MV/m narrow pulse width (~ 33 ns) electric field in the magnetically insulated transmission line (MITL) of a pulsed power accelerator. To date, this is the highest direct external electric field measured electro-optically in a pulsed power accelerator, and it is between two to three orders of magnitude higher than values reported in comparable high energy scientific experiments. The MITL electric field is one of the most important operating parameters in an accelerator and is critical to understanding the properties of the radiation output. However, accurately measuring these high fields using conventional pulsed power diagnostics is difficult due to the strength of interfering particles and fields. Our approach uses a free-space laser beam with a dielectric crystal sensor that is highly immune to electromagnetic interference and does not require an external calibration. Here we focus on device theory, operating parameters, laboratory and pulsed power accelerator experiments as well as challenges that were overcome in the measurement environment.
Antimony induced structural and ultrastructural changes in Trapa natans
Authors: Baruah Sangita , Bora Monashree Sarma , Dutta Sanghita , Hazarika Kalyan Kumar , Mudoi Pronab , Sarma Kali Prasad 
Published: May 2021

AbstractAntimony (Sb) is considered as a priority toxic metalloid in the earth crust having no known biological function. The current study was carried out in a hydroponic experiment to study the accumulation of ecotoxic Sb in subcellular level, and to find out the ultrastructural damage caused by Sb in different vegetative parts of Trapa natans. Sb-induced structural and ultrastructural changes of T. natans were investigated using scanning electron microscope (SEM) and transmission electron microscope (TEM). Experimental plants were exposed to different Sb(III) treatments: SbT1 (1.5 μmol/L), SbT2 (40 μmol/L) and SbT3 (60 μmol/L). Calculated bioconcentration factor (BCF) and translocation factor (TF) showed that at higher concentration (SbT2, SbT3), T. natans is a potent phytoexcluder whereas it can translocate a substantial amount of Sb to the aerial parts at lower concentration (SbT1). SEM analysis revealed Sb-mediated structural changes in the size of stomatal aperture, intercellular spaces and vascular bundles of different vegetative tissues of T. natans. TEM results showed subcellular compartmentalization of Sb in vacuole and cell wall as electron dense deposition. This is considered as a part of strategy of T. natans to detoxify the deleterious effects under Sb stress conditions. Fourier transform infrared spectroscopy (FTIR) study of plant biomass revealed possible metabolites of T. natans which can bind Sb.
Patent ductus arteriosus treatment trends and associated morbidities in neonates
Authors: Park Joonsik , Yoon So J , Han Jungho , Song In G , Lim Joohee , Shin Jeong E , Eun Ho S , Park Kook I , Park Min S , Lee Soon M 
Published: May 2021

AbstractTo evaluate national epidemiologic data on infants treated for patent ductus arteriosus (PDA) in Korea and analyze outcomes associated with different PDA treatments. We retrospectively evaluated data on 12,336 patients diagnosed with PDA (International Classification of Diseases-10 code: Q250) between 2015 and 2018 from the Health Insurance Review and Assessment database. Among them, 1623 patients underwent surgical ligation (code: O1671). We used birth certificate data from Statistics Korea to estimate the prevalence, diagnosis, and treatment of PDA. The prevalence of infants with PDA was 81 infants per 10,000 live births and 45.2% in very low birth weight (VLBW) infants, which increased from 2015 to 2018. PDA ligation was performed in 2571 infants and 22% VLBW infants. Medical treatment was administered to 4202 infants, which decreased significantly, especially in VLBW infants (62% to 53%). The proportion of treatment was as follows: conservative treatment (53.1%), intravenous ibuprofen (24.4%), surgery (20.4%), and oral ibuprofen (10.7%); that among 4854 VLBW infants was as follows: intravenous ibuprofen (46.3%), conservative treatment (33.2%), surgery (22.2%), and oral ibuprofen (14.2%). Surgical treatment had a significantly higher risk (odds ratio 1.36) of mortality than conservative treatment. Surgical and/or medical treatments were associated with a higher risk of morbidity. Recently, increased use of conservative management of PDA has contributed to improved neonatal outcomes in VLBW infants. Select patients may still benefit from surgical ligation following careful consideration.
Validation of the relationship between coagulopathy and localization of hydroxyethyl starch on the vascular endothelium in a rat hemodilution model
Authors: Azumaguchi Ryu , Tokinaga Yasuyuki , Kazuma Satoshi , Kimizuka Motonobu , Hamada Kosuke , Sato Tomoe , Yamakage Michiaki 
Published: May 2021

AbstractVarious anticoagulant properties have been associated with hydroxyethyl starch (HES). However, the mechanism remains unclear and it has not been fully considered whether these properties are beyond the dilutional effect itself. The aim of this study was to reproduce the coagulopathy induced by HES and to test the hypothesis that the coagulopathy is caused by endothelial or glycocalyx damage due to localization of HES on the endothelium, which is caused by the high shear viscosity of dilutional blood. Using a rat model, we compared blood coagulability measured by Sonoclot, levels of endothelial and glycocalyx damage markers and coagulation factors, and blood shear viscosity when hemodilution was performed with physiological saline (PS), 6% HES 130/0.4 in PS, and 10% HES 200/0.5 in PS. We also evaluated the localization rates of fluorescently labeled HES on endothelium in the isolated aorta. HES decreased the fibrin gel formation rate more than did PS. HES was shown to cover the endothelium, possibly due to its high shear viscosity, and this mechanism potentially acted to protect, rather than damage, the endothelium and glycocalyx. However, this covering effect may be the cause of coagulopathy due to inhibition of von Willebrand factor secretion from the endothelium.
Assessment of potential invasion for six phytophagous quarantine pests in Taiwan
Authors: Yeh Hsin-Ting , Cheah Harn-Yeu , Chiu Ming-Chih , Liao Jhih-Rong , Ko Chiun-Cheng 
Published: May 2021

AbstractPest risk assessment is typically performed by expert taxonomists using a pest’s biological data. However, the biological data or expert taxonomists may be difficult to find. Here, we used species distribution modelling to predict potential invasion in which phytophagous quarantine pests survive in Taiwan; the pests (unrecorded yet in Taiwan) included were three notorious quarantine whiteflies (Crenidorsum aroidephagus, Aleurothrixus trachoides, and Paraleyrodes minei) and three aphids (Nasonovia ribisnigri, Macrosiphum euphorbiae, and Viteus vitifoliae). In brief, maximum entropy modelling (MaxEnt) was used to predict the suitability of the pests’ habitats under certain climatic conditions, and then receiver operating characteristic curve analysis was performed (to verify the prediction result). We then analysed environmental variables affecting the habitat suitability and matched them with Taiwan’s crop cultivation areas for the assessment of potential invasion. We observed that the habitat suitability of the cultivation areas of host plants was low for C. aroidephagus, A. trachoides, and N. ribisnigri but was high for the remaining three species. Moreover, precipitation of coldest quarter negatively affected habitat suitability for C. aroidephagus, P. minei, N. ribisnigri, and M. euphorbiae. Seasonal temperature changes also negatively affected the habitat suitability for A. trachoides. This is the first study to demonstrate the use of species distribution modelling as the preliminary step for the pest risk assessment of these emerging pests with limited biological data before their invasion.
Environmental implications and evidence of natural products from dental calculi of a Neolithic–Chalcolithic community (central Italy)
Authors: D’Agostino Alessia , Di Marco Gabriele , Rubini Mauro , Marvelli Silvia , Rizzoli Elisabetta , Canini Antonella , Gismondi Angelo 
Published: May 2021

AbstractIn this contribution, we investigated the role of plants in the prehistoric community ofCasale del Dolce(Anagni, FR, central Italy), through microparticles recovered from dental calculus. The finding of a great amount of pollen types, even in form of compact lumps, could indicate use of natural substances, such as honeybee products and/or conifer resins. This plant-microremain record also suggested environmental implications relative to the Neolithic and Chalcolithic period. Additionally, the stability of the tartar microenvironment had preserved starches and other microparticles, such as one epidermal trichome, a sporangium, and fragments of plant tissue, rarely detected in ancient dental calculus. The detection of secondary metabolites in the ancient matrix confirmed the familiarity of this community with plant resources. All these data supply various interesting food for thought and expand the knowledge about the potential of dental calculus in archaeological and archaeobotanical fields with a special focus on palaeoecology.
Fluorescence Fluctuation Spectroscopy enables quantification of potassium channel subunit dynamics and stoichiometry
Authors: Tedeschi Giulia , Scipioni Lorenzo , Papanikolaou Maria , Abbott Geoffrey W. , Digman Michelle A. 
Published: May 2021

AbstractVoltage-gated potassium (Kv) channels are a family of membrane proteins that facilitate K+ ion diffusion across the plasma membrane, regulating both resting and action potentials. Kv channels comprise four pore-forming α subunits, each with a voltage sensing domain, and they are regulated by interaction with β subunits such as those belonging to the KCNE family. Here we conducted a comprehensive biophysical characterization of stoichiometry and protein diffusion across the plasma membrane of the epithelial KCNQ1-KCNE2 complex, combining total internal reflection fluorescence (TIRF) microscopy and a series of complementary Fluorescence Fluctuation Spectroscopy (FFS) techniques. Using this approach, we found that KCNQ1-KCNE2 has a predominant 4:4 stoichiometry, while non-bound KCNE2 subunits are mostly present as dimers in the plasma membrane. At the same time, we identified unique spatio-temporal diffusion modalities and nano-environment organization for each channel subunit. These findings improve our understanding of KCNQ1-KCNE2 channel function and suggest strategies for elucidating the subunit stoichiometry and forces directing localization and diffusion of ion channel complexes in general.
Enhanced condensation heat transfer using porous silica inverse opal coatings on copper tubes
Authors: Adera Solomon , Naworski Lauren , Davitt Alana , Mandsberg Nikolaj K. , Shneidman Anna V. , Alvarenga Jack , Aizenberg Joanna 
Published: May 2021

AbstractPhase-change condensation is commonplace in nature and industry. Since the 1930s, it is well understood that vapor condenses in filmwise mode on clean metallic surfaces whereas it condenses by forming discrete droplets on surfaces coated with a promoter material. In both filmwise and dropwise modes, the condensate is removed when gravity overcomes pinning forces. In this work, we show rapid condensate transport through cracks that formed due to material shrinkage when a copper tube is coated with silica inverse opal structures. Importantly, the high hydraulic conductivity of the cracks promote axial condensate transport that is beneficial for condensation heat transfer. In our experiments, the cracks improved the heat transfer coefficient from ≈ 12 kW/m2 K for laminar filmwise condensation on smooth clean copper tubes to ≈ 80 kW/m2 K for inverse opal coated copper tubes; nearly a sevenfold increase from filmwise condensation and identical enhancement with state-of-the-art dropwise condensation. Furthermore, our results show that impregnating the porous structure with oil further improves the heat transfer coefficient by an additional 30% to ≈ 103 kW/m2 K. Importantly, compared to the fast-degrading dropwise condensation, the inverse opal coated copper tubes maintained high heat transfer rates when the experiments were repeated > 20 times; each experiment lasting 3–4 h. In addition to the new coating approach, the insights gained from this work present a strategy to minimize oil depletion during condensation from lubricated surfaces.
Novel late-stage radiosynthesis of 5-[18F]-trifluoromethyl-1,2,4-oxadiazole (TFMO) containing molecules for PET imaging
Authors: Turkman Nashaat , Liu Daxing , Pirola Isabella 
Published: May 2021

AbstractSmall molecules that contain the (TFMO) moiety were reported to specifically inhibit the class-IIa histone deacetylases (HDACs), an important target in cancer and the disorders of the central nervous system (CNS). However, radiolabeling methods to incorporate the [18F]fluoride into the TFMO moiety are lacking. Herein, we report a novel late-stage incorporation of [18F]fluoride into the TFMO moiety in a single radiochemical step. In this approach the bromodifluoromethyl-1,2,4-oxadiazole was converted into [18F]TFMO via no-carrier-added bromine-[18F]fluoride exchange in a single step, thus producing the PET tracers with acceptable radiochemical yield (3–5%), high radiochemical purity (> 98%) and moderate molar activity of 0.33–0.49 GBq/umol (8.9–13.4 mCi/umol). We validated the utility of the novel radiochemical design by the radiosynthesis of [18F]TMP195, which is a known TFMO containing potent inhibitor of class-IIa HDACs.
miRNAs of Aedes aegypti (Linnaeus 1762) conserved in six orders of the class Insecta
Authors: Rodríguez-Sanchez Iram Pablo , Saldaña-Torres Daniel Rafael , Villanueva-Segura Olga Karina , Garza-Rodriguez Maria Lourdes , Gómez-Govea Mayra A. , Liang Ghongwei , de Lourdes Ramírez-Ahuja María , De La Luz Martinez-Fierro Margarita , Delgado-Enciso Ivan , Martinez-de-Villarreal Laura E. , Zhou Yu , Flores-Suarez Adriana E. , Chen Xi , Resendez-Pérez Diana , Zhang Chen-Yu , Ponce-Garcia Gustavo 
Published: May 2021

AbstractAedesaegyptiL. is the most important vector of arboviruses such as dengue, Zika, chikungunya, Mayaro, and yellow fever, which impact millions of people’s health per year. MicroRNA profile has been described in some mosquito species as being important for biological processes such as digestion of blood, oviposition, sexual differentiation, insecticide resistance, and pathogens dissemination. We identified the miRNAs ofAe.aegyptifemales, males and eggs of a reference insecticide susceptible strain New Orleans and compared them with those other insects to determine miRNA fingerprint by new-generation sequencing. The sequences were analyzed using data mining tools and categorization, followed by differential expression analysis and conservation with other insects. A total of 55 conserved miRNAs were identified, of which 34 were of holometabolous insects and 21 shared with hemimetabolous insects. Of these miRNAs, 32 had differential expression within the stages analyzed. Three predominant functions of miRNA were related to embryonic development regulation, metamorphosis, and basal functions. The findings of this research describe new information onAe.aegyptiphysiology which could be useful for the development of new control strategies, particularly in mosquito development and metamorphosis processes.
A pharmacovigilance study of association between proton pump inhibitor and dementia event based on FDA adverse event reporting system data
Authors: Wu Bin , Hu Qiaozhi , Tian Fangyuan , Wu Fengbo , Li Yuwen , Xu Ting 
Published: May 2021

AbstractProton pump inhibitor (PPI) was widely used around the world. Studies suggested conflicting results between PPI treatment and dementia event. This study examined the association between six PPI agents and dementia event by mining the US FDA Adverse Event Reporting System (FAERS) database from 2004 to 2020. We employed proportional reporting ratio (PRR) and information element (IC) methods to detect the signals of dementia relevant to PPI. We also analyzed characteristics of PPI and positive control reports, compared dementia event between long- and short-duration of PPI treatment. Finally, we identified 2396 dementia cases with PPI treatment. We did not detect significant signal between PPI and dementia event: PRR = 0.98, 95%CI 0.94 to 1.02, IC = −0.03, 95%CI − 0.17 to 0.10, even in gastroesophageal reflux disease cases: PRR = 0.65, 95%CI 0.59 to 0.72, IC = −0.62, 95%CI − 0.97 to − 0.27. No significant differences of dementia event were detected between long- and short- duration groups, the OR (95%CI) of the 3 years, 5 years and 10 years comparison were 0.70 (0.48 to 1.02), 0.72 (0.45 to 1.15) and 1.65 (0.75 to 3.63), respectively. Based on the current FAERS data mining, we discovered no association between PPI use and dementia event, even in long-term PPI therapy case.