bluuebunny/crossref_metadata_2025_split huggingface dataset:
Comprehensive assessment of myocardial remodeling in ischemic heart disease by synchrotron propagation based X-ray phase contrast imaging
Authors: Planinc Ivo , Garcia-Canadilla Patricia , Dejea Hector , Ilic Ivana , Guasch Eduard , Zamora Monica , Crispi Fàtima , Stampanoni Marco , Milicic Davor , Bijnens Bart , Bonnin Anne , Cikes Maja 
Published: July 2021

AbstractCardiovascular research is in an ongoing quest for a superior imaging method to integrate gross-anatomical information with microanatomy, combined with quantifiable parameters of cardiac structure. In recent years, synchrotron radiation-based X-ray Phase Contrast Imaging (X-PCI) has been extensively used to characterize soft tissue in detail. The objective was to use X-PCI to comprehensively quantify ischemic remodeling of different myocardial structures, from cell to organ level, in a rat model of myocardial infarction. Myocardial infarction-induced remodeling was recreated in a well-established rodent model. Ex vivo rodent hearts were imaged by propagation based X-PCI using two configurations resulting in 5.8 µm and 0.65 µm effective pixel size images. The acquired datasets were used for a comprehensive assessment of macrostructural changes including the whole heart and vascular tree morphology, and quantification of left ventricular myocardial thickness, mass, volume, and organization. On the meso-scale, tissue characteristics were explored and compared with histopathological methods, while microstructural changes were quantified by segmentation of cardiomyocytes and calculation of cross-sectional areas. Propagation based X-PCI provides detailed visualization and quantification of morphological changes on whole organ, tissue, vascular as well as individual cellular level of the ex vivo heart, with a single, non-destructive 3D imaging modality.
Corneal pachymetry by AS-OCT after Descemet’s membrane endothelial keratoplasty
Authors: Heslinga Friso G. , Lucassen Ruben T. , van den Berg Myrthe A. , van der Hoek Luuk , Pluim Josien P. W. , Cabrerizo Javier , Alberti Mark , Veta Mitko 
Published: July 2021

AbstractCorneal thickness (pachymetry) maps can be used to monitor restoration of corneal endothelial function, for example after Descemet’s membrane endothelial keratoplasty (DMEK). Automated delineation of the corneal interfaces in anterior segment optical coherence tomography (AS-OCT) can be challenging for corneas that are irregularly shaped due to pathology, or as a consequence of surgery, leading to incorrect thickness measurements. In this research, deep learning is used to automatically delineate the corneal interfaces and measure corneal thickness with high accuracy in post-DMEK AS-OCT B-scans. Three different deep learning strategies were developed based on 960 B-scans from 50 patients. On an independent test set of 320 B-scans, corneal thickness could be measured with an error of 13.98 to 15.50 μm for the central 9 mm range, which is less than 3% of the average corneal thickness. The accurate thickness measurements were used to construct detailed pachymetry maps. Moreover, follow-up scans could be registered based on anatomical landmarks to obtain differential pachymetry maps. These maps may enable a more comprehensive understanding of the restoration of the endothelial function after DMEK, where thickness often varies throughout different regions of the cornea, and subsequently contribute to a standardized postoperative regime.
Synergistic protective effects of lycopene and N-acetylcysteine against cisplatin-induced hepatorenal toxicity in rats
Authors: Elsayed Asmaa , Elkomy Ashraf , Elkammar Reda , Youssef Gehan , Abdelhiee Ehab Yahya , Abdo Walied , Fadl Sabreen Ezzat , Soliman Ahmed , Aboubakr Mohamed 
Published: July 2021

AbstractCisplatin (CP) is one of the most frequently used chemotherapy agents. The objective of this design was to determine the ameliorative effect of lycopene (LP) and/or N-acetylcysteine (NAC) in rats with hepatic and renal toxicity induced by CP. Rats were divided randomly into 7 groups (7 rats/group): control vehicle group (saline only), the LP group (10 mg/kg, orally), the NAC group (150 mg/kg, orally), the CP group (7.5 mg/kg, IP on day 27), the LP-CP group, the NAC-CP group, and the LP-NAC-CP group. The activities of alanine aminotransferase (ALT), aspartate aminotransferase (AST), and alkaline phosphatase (APK), and levels of urea, creatinine, and lipids (cholesterol, triglycerides, and low-density lipoprotein-cholesterol) increased after CP injection in the serum. Moreover, CP decreased levels of protein, albumin, and HDL cholesterol. Meanwhile, malondialdehyde significantly increased with a decrease in reduced glutathione, superoxide dismutase, and catalase in the liver and kidney tissues. CP also induced some pathological lesions and increased the expression of caspase-3 in the liver and kidney tissues. Administration of LP and NAC alone or in combinations ameliorated hepatorenal toxicity and apoptosis induced by CP.
User experience analysis of AbC-19 Rapid Test via lateral flow immunoassays for self-administrated SARS-CoV-2 antibody testing
Authors: Jing Min , Bond Raymond , Robertson Louise J. , Moore Julie , Kowalczyk Amanda , Price Ruth , Burns William , Nesbit M. Andrew , McLaughlin James , Moore Tara 
Published: July 2021

AbstractLateral flow immunoassays are low cost, rapid and highly efficacious point-of-care devices, which have been used for SARS-CoV-2 antibody testing by professionals. However, there is a lack of understanding about how self-administered tests are used by the general public for mass testing in different environmental settings. The purpose of this study was to assess the user experience (UX) (including usability) of a self-testing kit to identify COVID-19 antibodies used by a representative sample of the public in their cars, which included 1544 participants in Northern Ireland. The results based on 5-point Likert ratings from a post-test questionnaire achieved an average UX score of 96.03% [95% confidence interval (CI) 95.05–97.01%], suggesting a good degree of user experience. The results of the Wilcoxon rank sum tests suggest that UX scores were independent of the user’s age and education level although the confidence in this conclusion could be strengthened by including more participants aged younger than 18 and those with only primary or secondary education. The agreement between the test result as interpreted by the participant and the researcher was 95.85% [95% CI 94.85–96.85%], Kappa score 0.75 [95% CI 0.69–0.81] (indicating substantial agreement). Text analysis via the latent Dirichlet allocation model for the free text responses in the survey suggest that the user experience could be improved for blood-sample collection, by modifying the method of sample transfer to the test device and giving clearer instructions on how to interpret the test results. The overall findings provide an insight into the opportunities for improving the design of SARS-CoV-2 antibody testing kits to be used by the general public and therefore inform protocols for future user experience studies of point-of-care tests.
Focused VHEE (very high energy electron) beams and dose delivery for radiotherapy applications
Authors: Whitmore L. , Mackay R. I. , van Herk M. , Jones J. K. , Jones R. M. 
Published: July 2021

AbstractThis paper presents the first demonstration of deeply penetrating dose delivery using focused very high energy electron (VHEE) beams using quadrupole magnets in Monte Carlo simulations. We show that the focal point is readily modified by linearly changing the quadrupole magnet strength only. We also present a weighted sum of focused electron beams to form a spread-out electron peak (SOEP) over a target region. This has a significantly reduced entrance dose compared to a proton-based spread-out Bragg peak (SOBP). Very high energy electron (VHEE) beams are an exciting prospect in external beam radiotherapy. VHEEs are less sensitive to inhomogeneities than proton and photon beams, have a deep dose reach and could potentially be used to deliver FLASH radiotherapy. The dose distributions of unfocused VHEE produce high entrance and exit doses compared to other radiotherapy modalities unless focusing is employed, and in this case the entrance dose is considerably improved over existing radiations. We have investigated both symmetric and asymmetric focusing as well as focusing with a range of beam energies.
Navigation of a magnetic micro-robot through a cerebral aneurysm phantom with magnetic particle imaging
Authors: Bakenecker Anna C. , von Gladiss Anselm , Schwenke Hannes , Behrends André , Friedrich Thomas , Lüdtke-Buzug Kerstin , Neumann Alexander , Barkhausen Joerg , Wegner Franz , Buzug Thorsten M. 
Published: July 2021

AbstractCerebral aneurysms are potentially life threatening and nowadays treated by a catheter-guided coiling or by a neurosurgical clipping intervention. Here, we propose a helically shaped magnetic micro-robot, which can be steered by magnetic fields in an untethered manner and could be applied for a novel coiling procedure. This is shown by navigating the micro-robot through an additively manufactured phantom of a human cerebral aneurysm. The magnetic fields are applied with a magnetic particle imaging (MPI) scanner, which allows for the navigation and tomographic visualization by the same machine. With MPI the actuation process can be visualized with a localization accuracy of 0.68 mm and an angiogram can be acquired both without any radiation exposure. First in-vitro phantom experiments are presented, showing an idea of a robot conducted treatment of cerebral aneurysms.
Subthreshold electrical stimulation as a low power electrical treatment for stroke rehabilitation
Authors: Kim Kyungsoo , Yoo Seung-Jun , Kim So Yeon , Lee Taeju , Lim Sung-Ho , Jang Jae-Eun , Je Minkyu , Moon Cheil , Choi Ji-Woong 
Published: July 2021

AbstractAs a promising future treatment for stroke rehabilitation, researchers have developed direct brain stimulation to manipulate the neural excitability. However, there has been less interest in energy consumption and unexpected side effect caused by electrical stimulation to bring functional recovery for stroke rehabilitation. In this study, we propose an engineering approach with subthreshold electrical stimulation (STES) to bring functional recovery. Here, we show a low level of electrical stimulation boosted causal excitation in connected neurons and strengthened the synaptic weight in a simulation study. We found that STES with motor training enhanced functional recovery after stroke in vivo. STES was shown to induce neural reconstruction, indicated by higher neurite expression in the stimulated regions and correlated changes in behavioral performance and neural spike firing pattern during the rehabilitation process. This will reduce the energy consumption of implantable devices and the side effects caused by stimulating unwanted brain regions.
Geochemical characterization and assessment of fluoride sources in groundwater of Siloam area, Limpopo Province, South Africa
Authors: Onipe Tobiloba , Edokpayi Joshua N. , Odiyo John O. 
Published: July 2021

AbstractSiloam’s groundwater is reportedly characterized by high fluoride. In response to the reported high incidence of dental fluorosis in the area, sources of elevated fluoride in the groundwater were investigated. Total fluoride (TF) was determined using Ion Chromatograph and Fluoride Ion Selective Electrode. The mineral composition of rocks and soils were determined using X-ray Fluorescence and X-ray diffraction, respectively. Results revealed that groundwater fluoride concentration ranged from 3.92 to 4.95 mg/L. Na-Cl water type was found to be dominant in the water samples. TF content of the rocks and soils ranged from 10 to 2000 mg/L. Leachates were obtained by making a slurry from the samples at a predetermined temperature and time. TF in leachates ranged between 0.27 and 14.88 mg/L and 0.05 to 10.40 mg/L at induced, and non-induced temperatures, respectively. The possible source of fluoride has been previously inferred to be caused by fluorite minerals occurring at greater depth. However, this study proves that fluoride decreases with depth and the elevated fluoride in the groundwater is caused by smectite-kaolinite clay, muscovite and chlorite minerals abundant in the area. Geothermal temperature exhibited by the groundwater in the area is a major factor enhancing the release of fluoride from the clay materials.
Effects of education, income, and occupation on prevalence and symptoms of knee osteoarthritis
Authors: Lee Ji Yeon , Han Kyungdo , Park Yong Gyu , Park Sung-Hwan 
Published: July 2021

AbstractTo examine the effect of socioeconomic status (SES) as measured by three components of education level, income level, and occupation on prevalence and symptom severity of knee osteoarthritis (OA) and to determine which of these factors has the strongest association. We conducted a cross-sectional study using data from the Fifth Korean National Health and Nutrition Examination Survey that were collected between 2010 and 2012. Male and female participants 50 years or older were included. Analyses to examine the associations of the three SES components with prevalence and symptom severity of knee OA were performed. A total 9,071 participants was included in the study. As expected, lower education, lower income level, and non-managerial or no job were associated with higher prevalence of knee OA and knee symptoms. Among the three SES components, lower education was most strongly associated with knee pain and radiographic knee OA after adjusting for the other two. Lower education level is the component of SES that most strongly relates to higher prevalence of knee OA and knee symptoms. Improving societal education level might decrease the socioeconomic burden of knee OA.
Changes in sexual behavior among high-school students over a 40-year period
Authors: Borneskog Catrin , Häggström-Nordin Elisabet , Stenhammar Christina , Tydén Tanja , Iliadis Stavros I. 
Published: July 2021

AbstractThe aim of this study was to investigate sexual behavior, contraceptive use, risk factors as well as sources of sex information among first-year high-school students in Sweden. Secondly, to assess differences between genders and study programs as well as changes over a 40-year period. A repeated cross-sectional survey was conducted in two cities. A questionnaire comprising 77 items was used. The study population consisted of 415 students (63.4% females). The median age of sexual intercourse was 15 years. In total, 37% had had sexual intercourse, compared to 56.3% in 2009 and 45% in 1999 (p < 0.001), and the proportion of students who had their first sexual intercourse was not influenced by gender. More students in vocational programs (46.3%), compared to theoretical (33.3%), had experience of at least one sexual intercourse (p = 0.019). The same extend of contraception use at first and latest intercourse was reported, compared to previous studies. Forty-nine percent were mostly informed about sex from the internet, while in previous years, magazines, family and youth clinics were the main information sources. Comparing over time, students were in general less sexually experienced and less engaged in non-penetrative sex and physical intimacy. These findings call for a new approach, when designing sex and relationship education and health-care counseling in adolescents.
Uncertainty increases curiosity, but decreases happiness
Authors: van Lieshout Lieke L. F. , de Lange Floris P. , Cools Roshan 
Published: July 2021

AbstractYou probably know what kind of things you are curious about, but can you also explain what it feels like to be curious? Previous studies have demonstrated that we are particularly curious when uncertainty is high and when information provides us with a substantial update of what we know. It is unclear, however, whether this drive to seek information (curiosity) is appetitive or aversive. Curiosity might correspond to an appetitive drive elicited by the state of uncertainty, because we like that state, or rather it might correspond to an aversive drive to reduce the state of uncertainty, because we don’t like it. To investigate this, we obtained both subjective valence (happiness) and curiosity ratings from subjects who performed a lottery task that elicits uncertainty-dependent curiosity. We replicated a strong main effect of outcome uncertainty on curiosity: Curiosity increased with outcome uncertainty, irrespective of whether the outcome represented a monetary gain or loss. By contrast, happiness decreased with higher outcome uncertainty. This indicates that people were more curious, but less happy about lotteries with higher outcome uncertainty. These findings raise the hypothesis, to be tested in future work, that curiosity reflects an aversive drive to reduce the unpleasant state of uncertainty.
Transcriptomic analysis links hepatocellular carcinoma (HCC) in HZE ion irradiated mice to a human HCC subtype with favorable outcomes
Authors: Ding Liang-Hao , Yu Yongjia , Edmondson Elijah F. , Weil Michael. M. , Pop Laurentiu M. , McCarthy Maureen , Ullrich Robert L. , Story Michael D. 
Published: July 2021

AbstractHigh-charge, high-energy ion particle (HZE) radiations are extraterrestrial in origin and characterized by high linear energy transfer (high-LET), which causes more severe cell damage than low-LET radiations like γ-rays or photons. High-LET radiation poses potential cancer risks for astronauts on deep space missions, but the studies of its carcinogenic effects have relied heavily on animal models. It remains uncertain whether such data are applicable to human disease. Here, we used genomics approaches to directly compare high-LET radiation-induced, low-LET radiation-induced and spontaneous hepatocellular carcinoma (HCC) in mice with a human HCC cohort from The Cancer Genome Atlas (TCGA). We identified common molecular pathways between mouse and human HCC and discovered a subset of orthologous genes (mR-HCC) that associated high-LET radiation-induced mouse HCC with a subgroup (mrHCC2) of the TCGA cohort. The mrHCC2 TCGA cohort was more enriched with tumor-suppressing immune cells and showed a better prognostic outcome than other patient subgroups.
Straw and residual film management enhances crop yield and weakens CO2 emissions in wheat–maize intercropping system
Authors: Gou Zhiwen , Yin Wen , Chai Qiang 
Published: July 2021

AbstractHigher CO2 emissions and lower crop productivity are becoming thorny problems and restricted sustainable development of agriculture in arid inland areas. Intercropping has been shown to enhance crop productivity. However, Intercropping generally requires more input that led to an increase in CO2 emissions. It is unknown whether designing tillage and film mulching in reduction could decrease soil CO2 emissions in intercropping. Therefore, we integrated no tillage combined with residual film mulching and straw returning into wheat–maize intercropping. The maximal soil CO2 fluxes (Fs) with intercropping was decreased by 12–21% compared to sole maize. Residual film mulching combined with straw returning (NTSMI) significantly reduced average Fs during the entire period of crop growth by 14–15%, compared with the conventional tillage (CTI). Soil CO2 emissions (CE) with intercropping was 18–20% less than that with sole maize and the NTSMI reduced CE by 12–16% compared to the CTI. The NTSMI boosted total grain yields (GY) by 14–17%, compared with the CTI. Wheat–maize intercropping significantly enhanced soil CO2 emission efficiency (CEE) by 33–41% in comparison to sole maize, and CEE with NTSMI was increased by 29–40% than that of CTI. A quadratic function for aboveground biomass (BA) combined with two linear functions for soil temperature (Ts) and soil water-filled pore space (WFPS) was suitable for the monitored results. A multiple regression model composed of the above three factors can explain 73–91% of the Fs variation. Crop biomass accumulation at the time of maximal Fs was less with intercropping compared with sole maize. The structural equation indicated that the BA synergistic effect on CEE through combining negative effects on CE and positive effects on GY in intercropping. In conclusion, no tillage with straw returning and residual film mulching in wheat–maize intercropping was confirmed to be an optimum management practice to reducing soil CO2 emissions and enhancing soil CO2 emission efficiency in arid inland agroecosystem.
Algorithm based on one monocular video delivers highly valid and reliable gait parameters
Authors: Azhand Arash , Rabe Sophie , Müller Swantje , Sattler Igor , Heimann-Steinert Anika 
Published: July 2021

AbstractDespite its paramount importance for manifold use cases (e.g., in the health care industry, sports, rehabilitation and fitness assessment), sufficiently valid and reliable gait parameter measurement is still limited to high-tech gait laboratories mostly. Here, we demonstrate the excellent validity and test–retest repeatability of a novel gait assessment system which is built upon modern convolutional neural networks to extract three-dimensional skeleton joints from monocular frontal-view videos of walking humans. The validity study is based on a comparison to the GAITRite pressure-sensitive walkway system. All measured gait parameters (gait speed, cadence, step length and step time) showed excellent concurrent validity for multiple walk trials at normal and fast gait speeds. The test–retest-repeatability is on the same level as the GAITRite system. In conclusion, we are convinced that our results can pave the way for cost, space and operationally effective gait analysis in broad mainstream applications. Most sensor-based systems are costly, must be operated by extensively trained personnel (e.g., motion capture systems) or—even if not quite as costly—still possess considerable complexity (e.g., wearable sensors). In contrast, a video sufficient for the assessment method presented here can be obtained by anyone, without much training, via a smartphone camera.
Copy number variation in the CES1 gene and the risk of non-alcoholic fatty liver in a Chinese Han population
Authors: Chen Bing bing , Yan Jian hui , Zheng Jing , Peng He wei , Cai Xiao ling , Pan Xin ting , Li Hui quan , Hong Qi zhu , Peng Xian-E 
Published: July 2021

AbstractA recent genome-wide copy number variations (CNVs) scan identified a 16q12.2 deletion that included the carboxylesterase 1 (CES1) gene, which is important in the metabolism of fatty acids and cholesterol. We aimed to investigate whether CES1 CNVs was associated with susceptibility to non-alcoholic fatty liver disease (NAFLD) in a Chinese Han population. A case–control study was conducted among 303 patients diagnosed with NAFLD and 303 age (± 5) and sex-matched controls from the Affiliated Nanping First Hospital of Fujian Medical University in China. The copy numbers of CES1 were measured using TaqMan quantitative real-time polymerase chain reaction (qPCR) and serum CES1 was measured using enzyme-linked immunosorbent assays. The Chi-squared test and a logistic regression model were used to evaluate the association between CES1 CNVs and NAFLD susceptibility. The distribution of CES1 CNVs showed a higher frequency of CNVs loss (< 2) among patients; however, the difference was not significant (P = 0.05). After controlling for other known or suspected risk factors for NAFLD, CES1 CNVs loss was significantly associated with greater risk of NAFLD (adjusted OR = 2.75, 95% CI 1.30–5.85, P = 0.01); while CES1 CNVs gain (> 2) was not. There was a suggestion of an association between increased CES1 serum protein levels and CNVs losses among cases, although this was not statistically significant (P = 0.07). Copy number losses (< 2) of CES1 contribute to susceptibility to NAFLD in the Chinese Han population.