bluuebunny/crossref_metadata_2025_split huggingface dataset:
In-situ abiogenic methane synthesis from diamond and graphite under geologically relevant conditions
Authors: Peña-Alvarez Miriam , Brovarone Alberto Vitale , Donnelly Mary-Ellen , Wang Mengnan , Dalladay-Simpson Philip , Howie Ross , Gregoryanz Eugene 
Published: November 2021

AbstractDiamond and graphite are fundamental sources of carbon in the upper mantle, and their reactivity with H2-rich fluids present at these depths may represent the key to unravelling deep abiotic hydrocarbon formation. We demonstrate an unexpected high reactivity between carbons’ most common allotropes, diamond and graphite, with hydrogen at conditions comparable with those in the Earth’s upper mantle along subduction zone thermal gradients. Between 0.5-3 GPa and at temperatures as low as 300 °C, carbon reacts readily with H2 yielding methane (CH4), whilst at higher temperatures (500 °C and above), additional light hydrocarbons such as ethane (C2H6) emerge. These results suggest that the interaction between deep H2-rich fluids and reduced carbon minerals may be an efficient mechanism for producing abiotic hydrocarbons at the upper mantle.
Large-area flexible organic solar cells
Authors: Yang Fu , Huang Yuting , Li Yaowen , Li Yongfang 
Published: November 2021

AbstractTwo major challenges need to be overcome to bridge the efficiency gap between small-area rigid organic solar cells (OSCs) and large-area flexible devices: the first challenge lies in preparing high-quality flexible transparent electrodes with low resistance, high transparency, smooth surface, and superior mechanical properties. Second, the scalable fabrication of thickness-insensitive photoactive layers with low-cost materials is also an essential task. In this review, recent progress and challenges of flexible large-area OSCs are summarized and analyzed. Based on our analysis, strategies and opportunities are proposed to promote the development of stable and efficient flexible large-area OSCs.
Examining oxidation in β-NiAl and β-NiAl+Hf alloys by stochastic cellular automata simulations
Authors: Roy Indranil , Ray Pratik K. , Balasubramanian Ganesh 
Published: November 2021

AbstractWe present results from a stochastic cellular automata (CA) model developed and employed for examining the oxidation kinetics of NiAl and NiAl+Hf alloys. The rules of the CA model are grounded in diffusion probabilities and basic principles of alloy oxidation. Using this approach, we can model the oxide scale thickness and morphology, specific mass change and oxidation kinetics as well as an approximate estimate of the stress and strains in the oxide scale. Furthermore, we also incorporate Hf in the grain boundaries and observe the “reactive element effect”, where doping with Hf results in a drastic reduction in the oxidation kinetics concomitant with the formation of thin, planar oxide scales. Interestingly, although we find that grain boundaries result in rapid oxidation of the undoped NiAl, they result in a slower-growing oxide and a planar oxide/metal interface when doped with Hf.
Smart coating with dual-pH sensitive, inhibitor-loaded nanofibers for corrosion protection
Authors: Li Chao , Guo Xiaolei , Frankel Gerald S. 
Published: November 2021

AbstractSmart coatings that provide corrosion protection on demand have received a lot of recent attention. In the present study, nanofibers containing a corrosion inhibitor were prepared by a coaxial electrospinning technique, which addresses the limitations of inhibitor-loaded microcapsules or nanocontainers. The as-prepared nanofibers have a core-shell structure with Ce(NO3)3 and the chitosan/polyacrylic acid polyelectrolyte coacervate as the core and shell materials, respectively. UV-vis spectroscopic analysis confirms that the nanofibers are pH-sensitive and able to release the enclosed Ce(NO3)3 at both low and high pH conditions, which are spontaneously generated during corrosion at local anodes and cathodes, respectively. A coating system consisting of such nanofibers within a polyvinyl butyral coating matrix exhibits improved corrosion protection of an AA2024-T3 substrate. Moreover, the embedded Ce(NO3)3-loaded nanofibers can persistently release Ce(NO3)3 to impede corrosion of AA2024-T3 when the artificially damaged coating sample is exposed to NaCl solution.
Cross-platform transcriptomic profiling of the response to recombinant human erythropoietin
Authors: Wang Guan , Kitaoka Traci , Crawford Ali , Mao Qian , Hesketh Andrew , Guppy Fergus M. , Ash Garrett I. , Liu Jason , Gerstein Mark B. , Pitsiladis Yannis P. 
Published: November 2021

AbstractRNA-seq has matured and become an important tool for studying RNA biology. Here we compared two RNA-seq (MGI DNBSEQ and Illumina NextSeq 500) and two microarray platforms (GeneChip Human Transcriptome Array 2.0 and Illumina Expression BeadChip) in healthy individuals administered recombinant human erythropoietin for transcriptome-wide quantification of differential gene expression. The results show that total RNA DNB-seq generated a multitude of target genes compared to other platforms. Pathway enrichment analyses revealed genes correlate to not only erythropoiesis and oxygen transport but also a wide range of other functions, such as tissue protection and immune regulation. This study provides a knowledge base of genes relevant to EPO biology through cross-platform comparisons and validation.
Early social adversity modulates the relation between attention biases and socioemotional behaviour in juvenile macaques
Authors: Rayson Holly , Massera Alice , Belluardo Mauro , Ben Hamed Suliann , Ferrari Pier Francesco 
Published: November 2021

AbstractAffect-biased attention may play a fundamental role in early socioemotional development, but factors influencing its emergence and associations with typical versus pathological outcomes remain unclear. Here, we adopted a nonhuman primate model of early social adversity (ESA) to: (1) establish whether juvenile, pre-adolescent macaques demonstrate attention biases to both threatening and reward-related dynamic facial gestures; (2) examine the effects of early social experience on such biases; and (3) investigate how this relation may be linked to socioemotional behaviour. Two groups of juvenile macaques (ESA exposed and non-ESA exposed) were presented with pairs of dynamic facial gestures comprising two conditions: neutral-threat and neutral-lipsmacking. Attention biases to threat and lipsmacking were calculated as the proportion of gaze to the affective versus neutral gesture. Measures of anxiety and social engagement were also acquired from videos of the subjects in their everyday social environment. Results revealed that while both groups demonstrated an attention bias towards threatening facial gestures, a greater bias linked to anxiety was demonstrated by the ESA group only. Only the non-ESA group demonstrated a significant attention bias towards lipsmacking, and the degree of this positive bias was related to duration and frequency of social engagement in this group. These findings offer important insights into the effects of early social experience on affect-biased attention and related socioemotional behaviour in nonhuman primates, and demonstrate the utility of this model for future investigations into the neural and learning mechanisms underlying this relationship across development.
Deep learning models for screening of high myopia using optical coherence tomography
Authors: Choi Kyung Jun , Choi Jung Eun , Roh Hyeon Cheol , Eun Jun Soo , Kim Jong Min , Shin Yong Kyun , Kang Min Chae , Chung Joon Kyo , Lee Chaeyeon , Lee Dongyoung , Kang Se Woong , Cho Baek Hwan , Kim Sang Jin 
Published: November 2021

AbstractThis study aimed to validate and evaluate deep learning (DL) models for screening of high myopia using spectral-domain optical coherence tomography (OCT). This retrospective cross-sectional study included 690 eyes in 492 patients with OCT images and axial length measurement. Eyes were divided into three groups based on axial length: a “normal group,” a “high myopia group,” and an “other retinal disease” group. The researchers trained and validated three DL models to classify the three groups based on horizontal and vertical OCT images of the 600 eyes. For evaluation, OCT images of 90 eyes were used. Diagnostic agreements of human doctors and DL models were analyzed. The area under the receiver operating characteristic curve of the three DL models was evaluated. Absolute agreement of retina specialists was 99.11% (range: 97.78–100%). Absolute agreement of the DL models with multiple-column model was 100.0% (ResNet 50), 90.0% (Inception V3), and 72.22% (VGG 16). Areas under the receiver operating characteristic curves of the DL models with multiple-column model were 0.99 (ResNet 50), 0.97 (Inception V3), and 0.86 (VGG 16). The DL model based on ResNet 50 showed comparable diagnostic performance with retinal specialists. The DL model using OCT images demonstrated reliable diagnostic performance to identify high myopia.
Novel colistin-EDTA combination for successful eradication of colistin-resistant Klebsiella pneumoniae catheter-related biofilm infections
Authors: Shein Aye Mya Sithu , Wannigama Dhammika Leshan , Higgins Paul G. , Hurst Cameron , Abe Shuichi , Hongsing Parichart , Chantaravisoot Naphat , Saethang Thammakorn , Luk-in Sirirat , Liao Tingting , Nilgate Sumanee , Rirerm Ubolrat , Kueakulpattana Naris , Laowansiri Matchima , Srisakul Sukrit , Muhummudaree Netchanok , Techawiwattanaboon Teerasit , Gan Lin , Xu Chenchen , Kupwiwat Rosalyn , Phattharapornjaroen Phatthranit , Rojanathanes Rojrit , Leelahavanichkul Asada , Chatsuwan Tanittha 
Published: November 2021

AbstractDevelopment of an effective therapy to overcome colistin resistance in Klebsiella pneumoniae, a common pathogen causing catheter-related biofilm infections in vascular catheters, has become a serious therapeutic challenge that must be addressed urgently. Although colistin and EDTA have successful roles for eradicating biofilms, no in vitro and in vivo studies have investigated their efficacy in catheter-related biofilm infections of colistin-resistant K. pneumoniae. In this study, colistin resistance was significantly reversed in both planktonic and mature biofilms of colistin-resistant K. pneumoniae by a combination of colistin (0.25–1 µg/ml) with EDTA (12 mg/ml). This novel colistin-EDTA combination was also demonstrated to have potent efficacy in eradicating colistin-resistant K. pneumoniae catheter-related biofilm infections, and eliminating the risk of recurrence in vivo. Furthermore, this study revealed significant therapeutic efficacy of colistin-EDTA combination in reducing bacterial load in internal organs, lowering serum creatinine, and protecting treated mice from mortality. Altered in vivo expression of different virulence genes indicate bacterial adaptive responses to survive in hostile environments under different treatments. According to these data discovered in this study, a novel colistin-EDTA combination provides favorable efficacy and safety for successful eradication of colistin-resistant K. pneumonia catheter-related biofilm infections.
p-STAT3 is a PDC-E2 interacting partner in human cholangiocytes and hepatocytes with potential pathobiological implications
Authors: Kilanczyk Ewa , Banales Jesus M. , Jurewicz Ewelina , Milkiewicz Piotr , Milkiewicz Malgorzata 
Published: November 2021

AbstractThe E2 component of the mitochondrial pyruvate dehydrogenase complex (PDC) is the key autoantigen in primary biliary cholangitis (PBC) and STAT3 is an inflammatory modulator that participates in the pathogenesis of many liver diseases. This study investigated whether PDC-E2 interacts with STAT3 in human cholangiocytes (NHC) and hepatocytes (Hep-G2) under cholestatic conditions induced by glyco-chenodeoxycholic acid (GCDC). GCDC induced PDC-E2 expression in the cytoplasmic and nuclear fraction of NHC, whereas in Hep-G2 cells PDC-E2 expression was induced only in the cytoplasmic fraction. GCDC-treatment stimulated phosphorylation of STAT3 in the cytoplasmic fraction of NHC. siRNA-mediated gene silencing of PDC-E2 reduced the expression of pY-STAT3 in NHC but not in HepG2 cells. Immunoprecipitation and a proximity ligation assay clearly demonstrated that GCDC enhanced pY-STAT3 binding to PDC-E2 in the nuclear and cytoplasmic fraction of NHC cells. Staining with Mitotracker revealed mitochondrial co-localization of PDC-E2/pS-STAT3 complexes in NHC and Hep-G2 cells. In cirrhotic PBC livers the higher expression of both PDC-E2 and pY-STAT3 was observed. The immunoblot analysis demonstrated the occurrence of double bands of PDC-E2 protein in control livers, which was associated with a lower expression of pY-STAT3. Our data indicate the interaction between PDC-E2 and phosphorylated STAT3 under cholestatic conditions, which may play a role in the development of PBC.
Projecting the effects of land subsidence and sea level rise on storm surge flooding in Coastal North Carolina
Authors: Johnston Jeremy , Cassalho Felicio , Miesse Tyler , Ferreira Celso M. 
Published: November 2021

AbstractMuch of the United States Atlantic coastline continues to undergo subsidence due to post glacial settlement and ground water depletion. Combined with eustatic sea level rise (SLR), this contributes to an increased rate of relative SLR. In this work, we utilize the ADvanced CIRCulation model to project storm surges across coastal North Carolina. Recent hurricanes Irene and Matthew are simulated considering SLR and subsidence estimates for 2100. Relative to present day conditions, storm surge susceptible regions increase by 27% (Irene) to 40% (Matthew) due to subsidence. Combined with SLR (+ 74 cm), results suggest more than a doubling of areal flood extent for Irene and more than a three-fold increase for Hurricane Matthew. Considering current regional population distributions, this translates to an increase in at-risk populations of 18% to 61% due to subsidence. Even further, exposed populations are projected to swell relative to Matthew and Irene baseline simulations (8200 and 28,500) by more than 70,000 in all SLR scenarios (79,400 to 133,600). While increases in surge inundation are driven primarily by SLR in the region, there remains a substantial contribution due to vertical land movement. This outlines the importance of exploring spatially variable land movement in surge prediction, independent of SLR.
The relationship between energy expenditure and physical functions in patients hospitalised for stroke
Authors: Hobo Kota , Kurita Hideaki , Momose Kimito 
Published: November 2021

AbstractWe assessed the relationship between energy expenditure (EE) and Functional Independence Measure motor items (FIM-M) score, Berg Balance Scale (BBS) score, and comfortable walking speed (CWS) in patients hospitalised for stroke. The total EE per day (TEE), EE during rehabilitation (REE), and EE during activities other than rehabilitation (OEE) were measured using a single-axis acceleration sensor in 36 patients hospitalised for the first stroke episode. In addition, the relationships between each type of EE and FIM-M, BBS, and CWS were investigated. In these patients (mean age 66.2 ± 10.6 years), the median values of TEE, REE, and OEE were 41.8 kcal, 18.5 kcal, and 16.6 kcal, respectively. Correlations were observed between each EE type and all physical function indices. Following the stratification of patients into two groups (high and low) based on the level of physical function, a significant correlation between EE type and physical function was observed only in the low BBS group. EE was correlated with overall physical function indices, but the trend differed depending on physical ability. When patients were stratified based on ability, there were several groups with no significant correlation. Therefore, several patients were unable to achieve an appropriate EE for their level of physical function.
Prevalence and co-occurrence of lifestyle risk factors for non-communicable diseases according to sociodemographic characteristics among adults Chilean residents
Authors: Aburto María José , Romero Dayna , Rezende Leandro F. M. , Sanchez Zila M. , Bolados Cristian Cofre , Guzmán-Habinger Juan , Rios Mario , Suárez-Reyes Mónica , Marques Adilson , Drenowatz Clemens , Cristi-Montero Carlos , Ferrari Gerson 
Published: November 2021

AbstractTo examine the prevalence and co-occurrence of lifestyle risk factors for non-communicable diseases (NCDs) according to sociodemographic characteristics in Chilean residents. A cross-sectional study based on data from 5995 adults from the Chilean National Health Survey. The lifestyle risk factors included were physical inactivity, tobacco consumption, alcohol consumption, low fruits and vegetable consumption, and overweight/obesity. The most frequent risk factor was overweight/obesity (75.6%), followed by alcohol consumption (74.8%), low fruits and vegetable consumption (51.7%), physical inactivity (36.3%), and tobacco consumption (27.9%). Only 1.0% of the participants did not present any risk factor, while 9.6%, 30.4%, 34.0%, 20.3%, and 4.7% accumulated one, two, three, four, and five risk factors. Men (OR 1.56; 95% CI 1.18; 2.04), people who have secondary education (OR 1.59; 95% CI 1.20; 2.10), and those with lower household income (OR 1.39; 95% CI 1.09; 1.59) had higher odds of three or more risk factors. Associations were inverse for older adults (OR 0.57; 95% CI 0.41; 0.79) and rural geographic areas (OR 0.77; 95% CI 0.67; 0.89). The prevalence of risk factors for NCDs is fairly high in Chilean residents. Interventions may need to target these co-occurrences rather than emphasizing individual risk factors for NCDs. Interventions could further consider these co-occurrences as a potential target for population stratification.
Extreme climate event promotes phenological mismatch between sexes in hibernating ground squirrels
Authors: Kucheravy Caila E. , Waterman Jane M. , dos Anjos Elaine A. C. , Hare James F. , Enright Chris , Berkvens Charlene N. 
Published: November 2021

AbstractHibernating ground squirrels rely on a short active period for breeding and mass accrual, and are thus vulnerable to extreme climate events that affect key periods in their annual cycle. Here, we document how a heatwave in March 2012 led to a phenological mismatch between sexes in Richardson’s ground squirrels (Urocitellus richardsonii). Females emerged from hibernation and commenced breeding earlier in 2012 relative to average female emergence. Although males had descended testes and pigmented scrota, it appeared that not all males were physiologically prepared to breed since 58.6% of males had non-motile sperm when breeding commenced. Body condition, relative testes size, and the relative size of accessory glands were significant predictors of sperm motility. Males with non-motile sperm had smaller accessory glands than males with motile sperm. There was no decrease in the number of juveniles that emerged in 2012 or female yearlings recruited in 2013, nor did juveniles emerge later than other years. The impact of this heatwave on male ground squirrels emphasizes the importance of assessing the consequences of climate change on the breeding success of hibernating species in both sexes, since the different sensitivity to external cues for emergence led to a mismatch in timing under this event.
Magnetic resonance T1w/T2w ratio and voxel-based morphometry in multiple system atrophy
Authors: Ponticorvo S. , Manara R. , Russillo M. C. , Erro R. , Picillo M. , Di Salle G. , Di Salle F. , Barone P. , Esposito F. , Pellecchia M. T. 
Published: November 2021

AbstractDiagnosis of multiple system atrophy (MSA) may be improved by using multimodal imaging approaches. We investigated the use of T1-weighted/T2-weighted (T1w/T2w) images ratio combined with voxel-based morphometry to evaluate brain tissue integrity in MSA compared to Parkinson’s disease (PD) and healthy controls (HC). Twenty-six patients with MSA, 43 patients with PD and 56 HC were enrolled. Whole brain voxel-based and local regional analyses were performed to evaluate gray and white matter (GM and WM) tissue integrity and mean regional values were used for patients classification using logistic regression. Increased mean regional values of T1w/T2w in bilateral putamen were detected in MSA-P compared to PD and HC. The combined use of regional GM and T1w/T2w values in the right and left putamen showed the highest accuracy in discriminating MSA-P from PD and good accuracy in discriminating MSA from PD and HC. A good accuracy was also found in discriminating MSA from PD and HC by either combining regional GM and T1w/T2w values in the cerebellum or regional WM and T1w/T2w in the cerebellum and brainstem. The T1w/T2w image ratio alone or combined with validated MRI parameters can be further considered as a potential candidate biomarker for differential diagnosis of MSA.
Factors influencing the protective behavior of individuals during COVID-19: a transnational survey
Authors: Tang Chia-Chun , Chen Hsi , Wu Wei-Wen 
Published: November 2021

AbstractTo slow the spread of infectious disease, it is crucial to understand the engagement of protective behavior among individuals. The purpose of this study was to systematically examine individuals’ protective behaviors and the associated factors across countries during COVID-19. This causal-comparative study used a self-developed online survey to assess individuals’ level of engagement with six protective behaviors. Analysis of variance and McNemar’s test were employed for data analysis. Three hundred and eighty-four responses were analyzed. The majority of participants lived in three areas: Taiwan, Japan, and North America. Overall, the participants reported a high level of engagement in protective behaviors. However, engagement levels varied according to several demographic variables. Hand hygiene and cleaning/ventilation are two independent behaviors that differ from almost all other protective behaviors. There is a need to target the population at risk, which demonstrates low compliance. Different strategies are needed to promote specific protective behaviors.
Inferring predator–prey interaction in the subterranean environment: a case study from Dinaric caves
Authors: Premate Ester , Zagmajster Maja , Fišer Cene 
Published: November 2021

AbstractPredator–prey interactions are among the most important biotic interactions shaping ecological communities and driving the evolution of defensive traits. These interactions and their effects on species received little attention in extreme and remote environments, where possibilities for direct observations and experimental manipulation of the animals are limited. In this paper, we study such type of environment, namely caves of the Dinarides (Europe), combining spatial and phylogenetic methods. We focused on several species ofNiphargusamphipods living in phreatic lakes, as some of them use the dorsal spines as putative morphological defensive traits. We predicted that these spines represent a defense strategy against the olm (Proteus anguinus), a top predator species in the subterranean waters. We tested for spatial overlap of the olm andNiphargusspecies and showed that spined species live in closer proximity to and co-occur more frequently with the olm than non-spined species. Modeling of the evolution of the spines ontoNiphargusphylogeny implies coevolution of this trait in the presence of olm. We conclude that these spines likely evolved as defensive traits in a predator–prey arms race. Combining multiple analyses, we provide an example for a methodological framework to assess predator–prey interactions when in-situ or laboratory observations are not possible.