bluuebunny/crossref_metadata_2025_split huggingface dataset:
Cytoprotective IgG antibodies in sera from a subset of patients with AQP4-IgG seropositive neuromyelitis optica spectrum disorder
Authors: Tradtrantip Lukmanee , Yeaman Michael R. , Verkman A. S. 
Published: November 2021

AbstractNeuromyelitis optica spectrum disorder (NMOSD) is an autoimmune inflammatory disease of the central nervous system. Most NMOSD patients are seropositive for immunoglobulin G (IgG) autoantibodies against astrocyte water channel aquaporin-4 (AQP4), called AQP4-IgG. AQP4-IgG binding to aquaporin-4 causes complement-dependent cytotoxicity (CDC), leading to inflammation and demyelination. Here, CDC was measured in AQP4-expressing cells exposed to human complement and heat-inactivated sera from 108 AQP4-IgG seropositive NMOSD subjects and 25 non-NMOSD controls. AQP4-IgG positive sera produced a wide range of CDC, with 50% maximum cytotoxicity produced by as low as 0.2% serum concentration. Unexpectedly, 58 samples produced no cytotoxicity, and of those, four sera were cytoprotective against cytotoxic AQP4-IgG. Cytoprotection was found against different cytotoxic monoclonal AQP4-IgGs and NMOSD patient sera, and in primary astrocyte cultures. Mechanistic studies revealed that the protective factor is an IgG antibody that did not inhibit complement directly, but interfered with binding of cytotoxic AQP4-IgG to AQP4 and consequent C1q binding and complement activation. Further studies suggested that non-pathogenic AQP4-IgG, perhaps with altered glycosylation, may contribute to reduced or ineffectual binding of cytotoxic AQP4-IgG, as well as reduced cell-surface AQP4. The presence of natural cytoprotective antibodies in AQP4-IgG seropositive sera reveals an added level of complexity in NMOSD disease pathogenesis, and suggests the potential therapeutic utility of ‘convalescent’ serum or engineered protective antibody to interfere with pathogenic antibody in AQP4-IgG seropositive NMOSD.
Characterising clinical Staphylococcus aureus isolates from the sinuses of patients with chronic rhinosinusitis
Authors: Wagner Mackenzie Brett , Zoing Melissa , Clow Fiona , Waite David W. , Radcliff Fiona J. , Taylor Michael W. , Biswas Kristi , Douglas Richard G. 
Published: November 2021

AbstractThe role of Staphylococcus aureus in the pathogenesis of the chronic sinonasal disease chronic rhinosinusitis (CRS), has not been definitively established. Comparative analyses of S. aureus isolates from CRS with those from control participants may offer insight into a possible pathogenic link between this organism and CRS. The intra- and inter-subject S. aureus strain-level diversity in the sinuses of patients with and without CRS were compared in this cross-sectional study. In total, 100 patients (CRS = 64, control = 36) were screened for S. aureus carriage. The overall carriage prevalence of S. aureus in this cohort was 24% (CRS n = 13, control n = 11). Cultured S. aureus isolates from 18 participants were strain-typed using spa gene sequencing. The bacterial community composition of the middle meatus was assessed using amplicon sequencing targeting the V3V4 hypervariable region of the bacterial 16S rRNA gene. S. aureus isolates cultured from patients were grown in co-culture with the commensal bacterium Dolosigranulum pigrum and characterised. All participants harboured a single S. aureus strain and no trend in disease-specific strain-level diversity was observed. Bacterial community analyses revealed a significant negative correlation in the relative abundances of S. aureus and D. pigrum sequences, suggesting an antagonistic interaction between these organisms. Co-cultivation experiments with these bacteria, however, did not confirm this interaction in vitro. We saw no significant associations of CRS disease with S. aureus strain types. The functional role that S. aureus occupies in CRS likely depends on other factors such as variations in gene expression and interactions with other members of the sinus bacterial community.
Enhanced thermoelectric properties in Sb/Ge core/shell nanowires through vacancy modulation
Authors: Bhuyan Prabal Dev , Gajjar P. N. , Magri Rita , Gupta Sanjeev K. 
Published: November 2021

AbstractIn the present work, we have modified the physical and electronic structure of Sb/Ge core/shell nanowires via vacancy creation and doping with foreign atoms with the aim to improve their thermoelectric energy conversion efficiency. Sb/Ge-NWs having a diameter of 1.5 Å show metallicity with 2Go quantum conductance. The stability of the nanowires is assessed through the calculation of their formation energy. The formation of one vacancy at either the Sb- and Ge-site modifies substantially the electronic properties. From the comparison of the thermoelectric properties of the nanowires with and without the vacancy, we have found that the figure of merit for the Sb/Ge NW with one Sb vacancy increases of 0.18 compared to the pristine NW. The NW doping with different transition metals: Fe, Co, Ni and Cu have been found to also enhance the conversion efficiency. Thus, our calculations show that the thermoelectric performance of metal–semiconductor core–shell NWs can be in principle improved as much as 80% by vacancy formation and doping.
Linking gut microbiome with the feeding behavior of the Arunachal macaque (Macaca munzala)
Authors: Ghosh Avijit , Thakur Mukesh , Sharma Lalit Kumar , Chandra Kailash 
Published: November 2021

AbstractExploring the gut microbiome is an emerging tool for monitoring wildlife health and physiological conditions which often sustained under the variety of stresses and challenges. We analyzed gut microbiome of Arunachal macaque (Macaca munzala) of two disjunct populations from Arunachal Pradesh, India, to validate whether the geography or the feeding habits plays a principal role in shaping the gut microbiome in natural populations. We observed geography has a mere effect but feeding habits (i.e. feeding upon the leftover food and crop-raiding) significantly influenced the gut microbiome composition. The phylum Proteobacteria found to be enriched in leftover feeding group while phylum Bacteroidetes was differentially abundant in crop-raiding group. We observed predominant phyla Firmicutes followed by Proteobacteria and Bacteroidetes with the dominant classes represented by the Clostridia. Interestingly, one individual with known diarrheal/metabolic disorder exhibited complete dominance of the order Bacillales and showed 100% sequence similarity with genus Solibacillus. We raise concern that shift in diet of macaques may compel them to expose for various human diseases as two macaques feeding upon the leftover food exhibited dysbiotic gut microbiome. The present study provides the pragmatic evidences of how the alteration of food resources can harm the physiological condition of the macaques in wild and raises alarm to the forest officials/managers in strategise planting of natural food resources and monitor anthropogenic activities in the distribution of Arunachal macaques.
Ni–Fe phosphide deposited carbon felt as free-standing bifunctional catalyst electrode for urea electrolysis
Authors: Yun Woo Hyun , Das Gautam , Kim Bohyeon , Park Bang Ju , Yoon Hyon Hee , Yoon Young Soo 
Published: November 2021

AbstractA free-standing catalyst electrode for the urea oxidation reaction (UOR) and hydrogen evolution reaction (HER) in a urea electrolysis cell was synthesized by electroplating a Ni–Fe alloy onto carbon felt, followed by phosphidation (P-NiFe@CF). The prepared P-NiFe@CF catalyst consisted of Ni5P4, NiP2, and FeP with 3D flower-like P-NiFe architecture on CF. P-NiFe@CF exhibited excellent electrocatalytic activity for the UOR (demanding only 1.39 V (vs. RHE) to achieve 200 mA cm−2), and for the HER with a low overpotential of 0.023 V (vs. RHE) at 10 mA cm−2, indicating its feasibility as a bifunctional catalyst electrode for urea electrolysis. A urea electrolysis cell with P-NiFe@CF as both the free-standing anode and cathode generated a current density of 10 mA cm−2 at a cell potential of 1.37 V (vs. RHE), which is considerably lower than that of water electrolysis, and also lower than previously reported values. The results indicate that the P-NiFe@CF catalyst electrodes can be used as free-standing bifunctional electrodes for urea electrolyzers.
Pharmacists’ interventions improve health-related quality of life of rural older person on warfarin: a randomized controlled trial
Authors: Falamić Slaven , Lucijanić Marko , Ortner-Hadžiabdić Maja , Marušić Srećko , Bačić-Vrca Vesna 
Published: November 2021

AbstractWarfarin therapy can significantly affect patients’ quality of life and cause therapy discontinuation. This study aimed to investigate the effect of the pharmacists’ interventions on the health-related quality of life (HRQoL) in older rural patients on warfarin therapy. Eligible older patients from rural area of Croatian province Slavonia were randomized into the intervention and control groups and followed for six months. Repeated education and a follow-up plan were provided to the participants in the intervention group, and if needed, the pharmacist intervened to optimize warfarin therapy. Secondary analysis on HRQoL data are presented here. Main outcome measure was Duke anticoagulation satisfactions scale questionnaire score. In total, 131 participants finished the study (median age 73 years; 51.1% male). Participants in the intervention group scored significantly lower (median being 86.5 and 66.0 in the control and intervention groups, respectively; p < 0,001), indicating higher HRQoL. Adverse drug reactions and pharmacist’s intervention were identified as predictive factors for patients’ HRQoL (r2 = 65.5%, P < 0.001). The study demonstrated that community pharmacist’s interventions can improve HRQoL of older patients taking warfarin what is of particular significance for patients living in rural areas with less accessible healthcare and lower socio-economic status.Clinicaltrials.gov (ID: NCT03212898), 11/07/2017, retrospectively registered.
Motion-in-depth effects on interceptive timing errors in an immersive environment
Authors: López-Moliner Joan , de la Malla Cristina 
Published: November 2021

AbstractWe often need to interact with targets that move along arbitrary trajectories in the 3D scene. In these situations, information of parameters like speed, time-to-contact, or motion direction is required to solve a broad class of timing tasks (e.g., shooting, or interception). There is a large body of literature addressing how we estimate different parameters when objects move both in the fronto-parallel plane and in depth. However, we do not know to which extent the timing of interceptive actions is affected when motion-in-depth (MID) is involved. Unlike previous studies that have looked at the timing of interceptive actions using constant distances and fronto-parallel motion, we here use immersive virtual reality to look at how differences in the above-mentioned variables influence timing errors in a shooting task performed in a 3D environment. Participants had to shoot at targets that moved following different angles of approach with respect to the observer when those reached designated shooting locations. We recorded the shooting time, the temporal and spatial errors and the head’s position and orientation in two conditions that differed in the interval between the shot and the interception of the target’s path. Results show a consistent change in the temporal error across approaching angles: the larger the angle, the earlier the error. Interestingly, we also found different error patterns within a given angle that depended on whether participants tracked the whole target’s trajectory or only its end-point. These differences had larger impact when the target moved in depth and are consistent with underestimating motion-in-depth in the periphery. We conclude that the strategy participants use to track the target’s trajectory interacts with MID and affects timing performance.
The role of contextual materials in object recognition
Authors: Lauer Tim , Schmidt Filipp , Võ Melissa L.-H. 
Published: November 2021

AbstractWhile scene context is known to facilitate object recognition, little is known about which contextual “ingredients” are at the heart of this phenomenon. Here, we address the question of whether the materials that frequently occur in scenes (e.g., tiles in a bathroom) associated with specific objects (e.g., a perfume) are relevant for the processing of that object. To this end, we presented photographs of consistent and inconsistent objects (e.g., perfume vs. pinecone) superimposed on scenes (e.g., a bathroom) and close-ups of materials (e.g., tiles). In Experiment 1, consistent objects on scenes were named more accurately than inconsistent ones, while there was only a marginal consistency effect for objects on materials. Also, we did not find any consistency effect for scrambled materials that served as color control condition. In Experiment 2, we recorded event-related potentials and found N300/N400 responses—markers of semantic violations—for objects on inconsistent relative to consistent scenes. Critically, objects on materials triggered N300/N400 responses of similar magnitudes. Our findings show that contextual materials indeed affect object processing—even in the absence of spatial scene structure and object content—suggesting that material is one of the contextual “ingredients” driving scene context effects.
Development and validation of a prognostic model for early triage of patients diagnosed with COVID-19
Authors: An Chansik , Oh Hyun Cheol , Chang Jung Hyun , Oh Seung-Jin , Lee Jung Mo , Han Chang Hoon , Kim Seong Woo 
Published: November 2021

AbstractWe developed a tool to guide decision-making for early triage of COVID-19 patients based on a predicted prognosis, using a Korean national cohort of 5,596 patients, and validated the developed tool with an external cohort of 445 patients treated in a single institution. Predictors chosen for our model were older age, male sex, subjective fever, dyspnea, altered consciousness, temperature ≥ 37.5 °C, heart rate ≥ 100 bpm, systolic blood pressure ≥ 160 mmHg, diabetes mellitus, heart disease, chronic kidney disease, cancer, dementia, anemia, leukocytosis, lymphocytopenia, and thrombocytopenia. In the external validation, when age, sex, symptoms, and underlying disease were used as predictors, the AUC used as an evaluation metric for our model’s performance was 0.850 in predicting whether a patient will require at least oxygen therapy and 0.833 in predicting whether a patient will need critical care or die from COVID-19. The AUCs improved to 0.871 and 0.864, respectively, when additional information on vital signs and blood test results were also used. In contrast, the protocols currently recommended in Korea showed AUCs less than 0.75. An application for calculating the prognostic score in COVID-19 patients based on the results of this study is presented on our website (https://nhimc.shinyapps.io/ih-psc/), where the results of the validation ongoing in our institution are periodically updated.
Multi-label classification of research articles using Word2Vec and identification of similarity threshold
Authors: Mustafa Ghulam , Usman Muhammad , Yu Lisu , afzal Muhammad Tanvir , Sulaiman Muhammad , Shahid Abdul 
Published: November 2021

AbstractEvery year, around 28,100 journals publish 2.5 million research publications. Search engines, digital libraries, and citation indexes are used extensively to search these publications. When a user submits a query, it generates a large number of documents among which just a few are relevant. Due to inadequate indexing, the resultant documents are largely unstructured. Publicly known systems mostly index the research papers using keywords rather than using subject hierarchy. Numerous methods reported for performing single-label classification (SLC) or multi-label classification (MLC) are based on content and metadata features. Content-based techniques offer higher outcomes due to the extreme richness of features. But the drawback of content-based techniques is the unavailability of full text in most cases. The use of metadata-based parameters, such as title, keywords, and general terms, acts as an alternative to content. However, existing metadata-based techniques indicate low accuracy due to the use of traditional statistical measures to express textual properties in quantitative form, such as BOW, TF, and TFIDF. These measures may not establish the semantic context of the words. The existing MLC techniques require a specified threshold value to map articles into predetermined categories for which domain knowledge is necessary. The objective of this paper is to get over the limitations of SLC and MLC techniques. To capture the semantic and contextual information of words, the suggested approach leverages the Word2Vec paradigm for textual representation. The suggested model determines threshold values using rigorous data analysis, obviating the necessity for domain expertise. Experimentation is carried out on two datasets from the field of computer science (JUCS and ACM). In comparison to current state-of-the-art methodologies, the proposed model performed well. Experiments yielded average accuracy of 0.86 and 0.84 for JUCS and ACM for SLC, and 0.81 and 0.80 for JUCS and ACM for MLC. On both datasets, the proposed SLC model improved the accuracy up to 4%, while the proposed MLC model increased the accuracy up to 3%.
Timing of social feedback shapes observational learning in strategic interaction
Authors: Zonca Joshua , Vostroknutov Alexander , Coricelli Giorgio , Polonio Luca 
Published: November 2021

AbstractMany types of social interaction require the ability to anticipate others' behavior, which is commonly referred to as strategic sophistication. In this context, observational learning can represent a decisive tool for behavioral adaptation. However, little is known on whether and when individuals learn from observation in interactive settings. In the current study, 321 participants played one-shot interactive games and, at a given time along the experiment, they could observe the choices of an overtly efficient player. This social feedback could be provided before or after the participant’s choice in each game. Results reveal that players with a sufficient level of strategic skills increased their level of sophistication only when the social feedback was provided after their choices, whereas they relied on blind imitation when they received feedback before their decision. Conversely, less sophisticated players did not increase their level of sophistication, regardless of the type of social feedback. Our findings disclose the interplay between endogenous and exogenous factors modulating observational learning in strategic interaction.
Photoactivated cell-killing amino-based flavylium compounds
Authors: Oliveira Hélder , Araújo Paula , Pereira Ana Rita , Mateus Nuno , de Freitas Victor , Oliveira Joana , Fernandes Iva 
Published: November 2021

AbstractPhotodynamic therapy (PDT) is a well-established therapeutic for the treatment of different diseases. The growing interest of this technique required the development of new photosensitizers with better photo-features. This work reports the study of the potential of five nature-inspired amino-based flavylium compounds with different structural features as photosensitizers towards topical PDT. In terms of dark cytotoxicity the five pigments were tested towards confluent skin cells in both fibroblasts and keratinocytes. In the range of concentrations tested (6.3–100 μM), keratinocytes were more prone to growth inhibition and the IC50 values for 5OH4′NMe2, 7NEt2st4′NMe2 and 7NEt24′NH2 were determined to be 47.3 ± 0.3 μM; 91.0 ± 0.8 μM and 29.8 ± 0.8 μM, respectively. 7NEt24′NMe2, 7NEt2st4′NMe2 and 7NEt24′NH2 showed significant fluorescence quantum yields (from 3.40 to 20.20%) and production of singlet oxygen (1O2). These latter chromophores presented IC50 values of growth inhibition of keratinocytes between 0.9 and 1.5 µM, after 10 min of photoactivation with white light. This cellular damage in keratinocyte cells upon white light activation was accompanied with the production of reactive oxygen species (ROS). It was also found that the compounds can induce damage by either type I (ROS production) or type II (singlet oxygen) PDT mechanism, although a higher cell survival was observed in the presence of 1O2 quenchers. Overall, a structure–activity relationship could be established, ranking the most important functional groups for the photoactivation efficiency as follows: C7-diethylamino > C4′-dimethylamino > C2-styryl.
Three-dimensional semi-automated volumetric assessment of the pulp space of teeth following regenerative dental procedures
Authors: Shetty Heeresh , Shetty Shishir , Kakade Adesh , Shetty Aditya , Karobari Mohmed Isaqali , Pawar Ajinkya M. , Marya Anand , Heboyan Artak , Venugopal Adith , Nguyen The Hanh , Rokaya Dinesh 
Published: November 2021

AbstractThe volumetric change that occurs in the pulp space over time represents a critical measure when it comes to determining the secondary outcomes of regenerative endodontic procedures (REPs). However, to date, only a few studies have investigated the accuracy of the available domain-specialized medical imaging tools with regard to three-dimensional (3D) volumetric assessment. This study sought to compare the accuracy of two different artificial intelligence-based medical imaging programs namely OsiriX MD (v 9.0, Pixmeo SARL, Bernex Switzerland, https://www.osirix-viewer.com) and 3D Slicer (http://www.slicer.org), in terms of estimating the volume of the pulp space following a REP. An Invitro assessment was performed to check the reliability and sensitivity of the two medical imaging programs in use. For the subsequent clinical application, pre- and post-procedure cone beam computed tomography scans of 35 immature permanent teeth with necrotic pulp and periradicular pathosis that had been treated with a cell-homing concept-based REP were processed using the two biomedical DICOM software programs (OsiriX MD and 3D Slicer). The volumetric changes in the teeth’s pulp spaces were assessed using semi-automated techniques in both programs. The data were statistically analyzed using t-tests and paired t-tests (P = 0.05). The pulp space volumes measured using both programs revealed a statistically significant decrease in the pulp space volume following the REP (P < 0.05), with no significant difference being found between the two programs (P > 0.05). The mean decreases in the pulp space volumes measured using OsiriX MD and 3D Slicer were 25.06% ± 19.45% and 26.10% ± 18.90%, respectively. The open-source software (3D Slicer) was found to be as accurate as the commercially available software with regard to the volumetric assessment of the post-REP pulp space. This study was the first to demonstrate the step-by-step application of 3D Slicer, a user-friendly and easily accessible open-source multiplatform software program for the segmentation and volume estimation of the pulp spaces of teeth treated with REPs.