bluuebunny/crossref_metadata_2025_split huggingface dataset:
Total numbers and in-hospital mortality of patients with myocardial infarction in Germany during the FIFA soccer world cup 2014
Authors: Keller Karsten , Hobohm Lukas , Schmitt Volker H. , Engelhardt Martin , Wenzel Philip , Post Felix , Münzel Thomas , Gori Tommaso , Friedmann-Bette Birgit 
Published: June 2021

AbstractEnvironmental stress like important soccer events can induce excitation, stress and anger. We aimed to investigate (i) whether the FIFA soccer world cup (WC) 2014 and (ii) whether the soccer games of the German national team had an impact on total numbers and in-hospital mortality of patients with myocardial infarction (MI) in Germany. We analyzed data of MI inpatients of the German nationwide inpatient sample (2013–2015). Patients admitted due to MI during FIFA WC 2014 (12th June–13th July2014) were compared to those during the same period 2013 and 2015 (12th June–13th July). Total number of MI patients was higher during WC 2014 than in the comparison-period 2013 (18,479 vs.18,089, P < 0.001) and 2015 (18,479 vs.17,794, P < 0.001). WC was independently associated with higher MI numbers (2014 vs. 2013: OR 1.04 [95% CI 1.01–1.07]; 2014 vs. 2015: OR 1.07 [95% CI 1.04–1.10], P < 0.001). Patient characteristics and in-hospital mortality rate (8.3% vs. 8.3% vs. 8.4%) were similar during periods. In-hospital mortality rate was not affected by games of the German national team (8.9% vs. 8.1%, P = 0.110). However, we observed an increase regarding in-hospital mortality from 7.9 to 9.3% before to 12.0% at final-match-day. Number of hospital admissions due to MI in Germany was 3.7% higher during WC 2014 than during the same 31-day period 2015. While in-hospital mortality was not affected by the WC, the in-hospital mortality was highest at WC final.
The fine-tuning of NPQ in diatoms relies on the regulation of both xanthophyll cycle enzymes
Authors: Blommaert Lander , Chafai Lamia , Bailleul Benjamin 
Published: June 2021

AbstractDiatoms possess an efficient mechanism to dissipate photons as heat in conditions of excess light, which is visualized as the Non-Photochemical Quenching of chlorophyll a fluorescence (NPQ). In most diatom species, NPQ is proportional to the concentration of the xanthophyll cycle pigment diatoxanthin formed from diadinoxanthin by the diadinoxanthin de-epoxidase enzyme. The reverse reaction is performed by the diatoxanthin epoxidase. Despite the xanthophyll cycle’s central role in photoprotection, its regulation is not yet well understood. The proportionality between diatoxanthin and NPQ allowed us to calculate the activity of both xanthophyll cycle enzymes in the model diatom Phaeodactylum tricornutum from NPQ kinetics. From there, we explored the light-dependency of the activity of both enzymes. Our results demonstrate that a tight regulation of both enzymes is key to fine-tune NPQ: (i) the rate constant of diadinoxanthin de-epoxidation is low under a light-limiting regime but increases as photosynthesis saturates, probably due to the thylakoidal proton gradient ΔpH (ii) the rate constant of diatoxanthin epoxidation exhibits an optimum under low light and decreases in the dark due to an insufficiency of the co-factor NADPH as well as in higher light through an as yet unresolved inhibition mechanism, that is unlikely to be related to the ΔpH. We observed that the suppression of NPQ by an uncoupler was due to an accelerated diatoxanthin epoxidation enzyme rather than to the usually hypothesized inhibition of the diadinoxanthin de-epoxidation enzyme.
Phylogenetic comparison and splice site conservation of eukaryotic U1 snRNP-specific U1-70K gene family
Authors: Fan Tao , Zhao Yu-Zhen , Yang Jing-Fang , Liu Qin-Lai , Tian Yuan , Debatosh Das , Liu Ying-Gao , Zhang Jianhua , Chen Chen , Chen Mo-Xian , Zhou Shao-Ming 
Published: June 2021

AbstractEukaryotic cells can expand their coding ability by using their splicing machinery, spliceosome, to process precursor mRNA (pre-mRNA) into mature messenger RNA. The mega-macromolecular spliceosome contains multiple subcomplexes, referred to as small nuclear ribonucleoproteins (snRNPs). Among these, U1 snRNP and its central component, U1-70K, are crucial for splice site recognition during early spliceosome assembly. The human U1-70K has been linked to several types of human autoimmune and neurodegenerative diseases. However, its phylogenetic relationship has been seldom reported. To this end, we carried out a systemic analysis of 95 animal U1-70K genes and compare these proteins to their yeast and plant counterparts. Analysis of their gene and protein structures, expression patterns and splicing conservation suggest that animal U1-70Ks are conserved in their molecular function, and may play essential role in cancers and juvenile development. In particular, animal U1-70Ks display unique characteristics of single copy number and a splicing isoform with truncated C-terminal, suggesting the specific role of these U1-70Ks in animal kingdom. In summary, our results provide phylogenetic overview of U1-70K gene family in vertebrates. In silico analyses conducted in this work will act as a reference for future functional studies of this crucial U1 splicing factor in animal kingdom.
An ACE2 Triple Decoy that neutralizes SARS-CoV-2 shows enhanced affinity for virus variants
Authors: Tanaka Shiho , Nelson Gard , Olson C. Anders , Buzko Oleksandr , Higashide Wendy , Shin Annie , Gonzalez Marcos , Taft Justin , Patel Roosheel , Buta Sofija , Richardson Ashley , Bogunovic Dusan , Spilman Patricia , Niazi Kayvan , Rabizadeh Shahrooz , Soon-Shiong Patrick 
Published: June 2021

AbstractThe SARS-CoV-2 variants replacing the first wave strain pose an increased threat by their potential ability to escape pre-existing humoral protection. An angiotensin converting enzyme 2 (ACE2) decoy that competes with endogenous ACE2 for binding of the SARS-CoV-2 spike receptor binding domain (S RBD) and inhibits infection may offer a therapeutic option with sustained efficacy against variants. Here, we used Molecular Dynamics (MD) simulation to predict ACE2 sequence substitutions that might increase its affinity for S RBD and screened candidate ACE2 decoys in vitro. The lead ACE2(T27Y/H34A)-IgG1FCfusion protein with enhanced S RBD affinity shows greater live SARS-CoV-2 virus neutralization capability than wild type ACE2. MD simulation was used to predict the effects of S RBD variant mutations on decoy affinity that was then confirmed by testing of an ACE2 Triple Decoy that included an additional enzyme activity-deactivating H374N substitution against mutated S RBD. The ACE2 Triple Decoy maintains high affinity for mutated S RBD, displays enhanced affinity for S RBD N501Y or L452R, and has the highest affinity for S RBD with both E484K and N501Y mutations, making it a viable therapeutic option for the prevention or treatment of SARS-CoV-2 infection with a high likelihood of efficacy against variants.
Production of basil (Ocimum basilicum L.) under different soilless cultures
Authors: Khater El-Sayed , Bahnasawy Adel , Abass Wael , Morsy Osama , El-Ghobashy Hossam , Shaban Yousry , Egela Mohsen 
Published: June 2021

AbstractThe main aim of this paper was to investigate the possibility of growing basil under three soilless systems (aeroponic, hydroponic and peatmoss slab systems). A model was developed to predict the nutrients consumption by basil plants. Shoot and root height, fresh and dry mass of whole plant, nutrients uptake, and oil content were studied during the growth period (after 4 and 7 weeks from transplanting). The results indicated that the shoot lengths of basil plants were 71.67 ± 2.89, 65.67 ± 1.15 and 62.33 ± 2.31 cm at the end of growth period for aeroponic, hydroponic and peatmoss slabs, respectively. The highest value of root height of basil plants was 37.67 ± 6.66 cm for aeroponic system. The dry mass of shoot of basil plants ranged from 28.48 ± 0.91 to 44.77 ± 0.97 and 72.98 ± 0.83 to 117.93 ± 1.40 g plant−1 after 4 and 7 weeks from transplanting, respectively. The highest values of the N, P, K, Ca and Mg uptakes were 753.99 ± 5.65, 224.88 ± 3.05, 449.75 ± 4.59, 529.12 ± 6.63 and 112.44 ± 1.67 mg plant−1 at the end of experimental period, respectively. The basil oil content ranged from 1.129 (1.11%) to 2.520 (1.80%) and 2.664 (1.42%) to 6.318 (1.44%) g plant−1 after 4 and 7 weeks from transplanting, respectively at the same pervious order. The production costs of basil plant were 2.93, 5.27 and 6.24 EGP kg−1 of plant. The model results were in a reasonable agreement with the experimental ones.
Changes in gut microbiota in the acute phase after spinal cord injury correlate with severity of the lesion
Authors: Bazzocchi Gabriele , Turroni Silvia , Bulzamini Maria Chiara , D’Amico Federica , Bava Angelica , Castiglioni Mirco , Cagnetta Valentina , Losavio Ernesto , Cazzaniga Maurizio , Terenghi Laura , De Palma Luisa , Frasca Giuseppina , Aiachini Beatrice , Cremascoli Sonia , Massone Antonino , Oggerino Claudia , Onesta Maria Pia , Rapisarda Lucia , Pagliacci Maria Cristina , Biscotto Sauro , Scarazzato Michele , Giovannini Tiziana , Balloni Mimosa , Candela Marco , Brigidi Patrizia , Kiekens Carlotte 
Published: June 2021

AbstractAfter spinal cord injury (SCI), patients face many physical and psychological issues including intestinal dysfunction and comorbidities, strongly affecting quality of life. The gut microbiota has recently been suggested to influence the course of the disease in these patients. However, to date only two studies have profiled the gut microbiota in SCI patients, months after a traumatic injury. Here we characterized the gut microbiota in a large Italian SCI population, within a short time from a not only traumatic injury. Feces were collected within the first week at the rehabilitation center (no later than 60 days after SCI), and profiled by 16S rRNA gene-based next-generation sequencing. Microbial profiles were compared to those publicly available of healthy age- and gender-matched Italians, and correlated to patient metadata, including type of SCI, spinal unit location, nutrition and concomitant antibiotic therapies. The gut microbiota of SCI patients shows distinct dysbiotic signatures, i.e. increase in potentially pathogenic, pro-inflammatory and mucus-degrading bacteria, and depletion of short-chain fatty acid producers. While robust to most host variables, such dysbiosis varies by lesion level and completeness, with the most neurologically impaired patients showing an even more unbalanced microbial profile. The SCI-related gut microbiome dysbiosis is very likely secondary to injury and closely related to the degree of completeness and severity of the lesion, regardless of etiology and time interval. This microbial layout could variously contribute to increased gut permeability and inflammation, potentially predisposing patients to the onset of severe comorbidities.
Risk factors and incidence of third trimester stillbirths in China
Authors: Hu Ying , Wu Qi , Liu Jia , Hong Die , Zou Yuqing , Lu Jingjing , Wang Yuhui , Chen Danqing , Qi Lu , Liang Zhaoxia 
Published: June 2021

AbstractAbout 2.6 million third-trimester stillbirths occur annually worldwide, mostly in low- and middle-income countries. However, the causes of stillbirths are rarely investigated. We performed a retrospective, hospital-based study in Zhejiang Province, southern China, of the causes of third-trimester stillbirths. Causes of stillbirths were classified using the Relevant Condition at Death classification system. From January 1, 2013, to December 31, 2018, we enrolled 341 stillbirths (born to 338 women) from 111,275 perinatal fetuses (born to 107,142 women), as well as 293 control cases (born to 291 women). The total incidence of third-trimester stillbirths was 3.06/1000 (341/111,275). There were higher proportions of women with a high body mass index, twins, pregnancy-induced hypertension, assisted reproduction and other risk factors among the antepartum than the control cases. The antepartum stillbirth fetuses were of lower median birth weight and gestational age and had a smaller portion of translucent amniotic fluid than the control cases. The antepartum stillbirth fetuses had a higher frequency of abnormalities detected prenatally and of fetal growth restriction than the control cases. Of 341 cases (born to 338 mothers), the most common causes of stillbirth were fetal conditions [117 (34.3%) cases], umbilical cord [88 (25.8%)], maternal conditions [34 (10.0%)], placental conditions [31 (9.1%)], and intrapartum [28 (8.2%)]. Only eight (2.3%), three (0.9%), and two (0.6%) stillbirths were attributed to amniotic fluid, trauma, and uterus, respectively. In 30 (8.8%) cases, the cause of death was unclassified. In conclusion, targeted investigation can ascertain the causes of most cases of third-trimester stillbirths.
Associated factors, post infection child growth, and household cost of invasive enteritis among under 5 children in Bangladesh
Authors: Das Rina , Haque Md. Ahshanul , Chisti Mohammod Jobayer , Faruque A. S. G. , Ahmed Tahmeed 
Published: June 2021

AbstractBoth Campylobacter- and Shigella-induced invasive enteritis are common in under-5 Bangladeshi children. Our study aimed to determine the factors associated with Campylobacter and Shigella enteritis among under-5 children, the post-infection worsening growth, and the household cost of invasive enteritis. Data of children having Shigella (591/803) and Campylobacter (246/1148) isolated from the fecal specimen in Bangladesh were extracted from the Global Enteric Multicenter Study (GEMS) for the period December 2007 to March 2011. In multiple logistic regression analysis, fever was observed more frequently among shigellosis cases [adjusted OR 2.21; (95% CI 1.58, 3.09)]. Breastfeeding [aOR 0.55; (95% CI 0.37, 0.81)] was found to be protective against Shigella. The generalized estimating equations multivariable model identified a negative association between Shigella and weight-for-height z score [aOR − 0.11; (95% CI − 0.21, − 0.001)]; a positive association between symptomatic Campylobacter and weight-for-age z score [aOR 0.22; (95% CI 0.06, 0.37)] and weight-for-height z score [aOR 0.22; (95% CI 0.08, 0.37)]. Total costs incurred by households were more in shigellosis children than Campylobacter-induced enteritis ($4.27 vs. $3.49). Households with low-level maternal education tended to incur less cost in case of their shigellosis children. Our findings underscore the need for preventive strategies targeting Shigella infection, which could potentially reduce the disease burden, associated household costs, and child growth faltering.
A new deep learning algorithm of 12-lead electrocardiogram for identifying atrial fibrillation during sinus rhythm
Authors: Baek Yong-Soo , Lee Sang-Chul , Choi Wonik , Kim Dae-Hyeok 
Published: June 2021

AbstractAtrial fibrillation (AF) is the most prevalent arrhythmia and is associated with increased morbidity and mortality. Its early detection is challenging because of the low detection yield of conventional methods. We aimed to develop a deep learning-based algorithm to identify AF during normal sinus rhythm (NSR) using 12-lead electrocardiogram (ECG) findings. We developed a new deep neural network to detect subtle differences in paroxysmal AF (PAF) during NSR using digital data from standard 12-lead ECGs. Raw digital data of 2,412 12-lead ECGs were analyzed. The artificial intelligence (AI) model showed that the optimal interval to detect subtle changes in PAF was within 0.24 s before the QRS complex in the 12-lead ECG. We allocated the enrolled ECGs to the training, internal validation, and testing datasets in a 7:1:2 ratio. Regarding AF identification, the AI-based algorithm showed the following values in the internal and external validation datasets: area under the receiver operating characteristic curve, 0.79 and 0.75; recall, 82% and 77%; specificity, 78% and 72%; F1 score, 75% and 74%; and overall accuracy, 72.8% and 71.2%, respectively. The deep learning-based algorithm using 12-lead ECG demonstrated high accuracy for detecting AF during NSR.
The first principle calculation of improving p-type characteristics of BxAl1-xN
Authors: Lu Zhengqian , Wang Fang , Liu Yuhuai 
Published: June 2021

AbstractAlN is one of the third-generation semiconductor materials with wide application prospects due to its 6.2 eV band gap. In the application of semiconductor deep ultraviolet lasers, progress is slow due to the difficulty in obtaining p-type AlN with good performance. In this paper, the commonly used way of Mg directly as AlN dopant is abandoned, the inhibition effect of the B component on self-compensation of AlN crystal was studied. The improvement of self-compensation performance of AlN crystal by B component is studied by first principles calculation. The results show that the addition of B component can increase the hole concentration of AlN, which is conducive to the formation of p-type AlN.
Efficacy of an automated laser for reducing wild bird visits to the free range area of a poultry farm
Authors: Elbers Armin R. W. , Gonzales José L. 
Published: June 2021

AbstractIn the Netherlands, free-range layer farms as opposed to indoor layer farms, are at greater risk with regard to the introduction of avian influenza viruses (AIVs). Wild waterfowl are the natural reservoir hosts of AIVs, and play a major role in their transmission to poultry by contaminating free-range layer areas. The laser as a wild bird repellent has been in use since the 1970s, in particular around airfields to reduce bird-strike. The efficacy of laser for reducing wild bird numbers in and around free-range poultry areas has however not been investigated. During the autumn–winter, wild bird visits to the free-range area of a layer farm was surveilled by video-camera for a month without laser, followed by a month with laser. The automated laser (Class-III B qualification) was operated in two separate areas (i) within the poultry free-range area that directly bordered the poultry barn between 5:00 p.m. and 10:00 a.m. when poultry were absent (free-range study area, size 1.5 ha), and (ii) in surrounding grass pastures between 10:00 a.m. and 5:00 p.m. The overall (all bird species combined) efficacy of the laser for reducing the rate of wild birds visiting the free-range study area was 98.2%, and for the Orders Anseriformes and Passeriformes, respectively, was 99.7% and 96.1%. With the laser in operation, the overall exposure time of the free-range area to wild bird visits, but specifically to the Order Anseriformes, was massively reduced. It can be concluded that the Class-III B laser is highly proficient at keeping wild birds, in particular waterfowl, away from the free-range area of layer farms situated along a winter migration flyway.
Network of biomarkers and their mediation effects on the associations between regular exercise and the incidence of cardiovascular & metabolic diseases
Authors: Park JooYong , Choi Jaesung , Kim Ji-Eun , Lee Miyoung , Shin Aesun , Lee Jong-koo , Kang Daehee , Choi Ji-Yeob 
Published: June 2021

AbstractThis study aimed to understand the biological process related to the prevention of cardiovascular & metabolic diseases (CMD), including diabetes, hypertension, and dyslipidemia via regular exercise. This study included 17,053 subjects aged 40–69 years in the Health Examinees Study from 2004 to 2012. Participation in regular exercise was investigated by questionnaires. Data on 42 biomarkers were collected from anthropometric measures and laboratory tests. We examined the associations between regular exercise and biomarkers using general linear models, between biomarkers and the risk of CMD using cox proportional hazard models, and the mediation effect of biomarkers using mediation analyses. Biomarker networks were constructed based on the significant differential correlations (p < 0.05) between the exercise and non-exercise groups in men and women, respectively. We observed significant mediators in 14 and 16 of the biomarkers in men and women, respectively. Triglyceride level was a noteworthy mediator in decreasing the risk of CMD with exercise, explaining 23.79% in men and 58.20% in women. The biomarker network showed comprehensive relationships and associations among exercise, biomarkers, and CMD. Body composition-related biomarkers were likely to play major roles in men, while obesity-related biomarkers seemed to be key factors in women.
Comparison of agrochemicals allocation efficiency between greenhouse and open-field vegetables in China
Authors: Yuan Yinghui , Zhang Xiaoheng 
Published: June 2021

AbstractThe overuse of agrochemicals in greenhouse production system has aroused high concerns in China. Existing studies have investigated the status and determinants of agrochemicals overuse for greenhouse vegetables whereas little is known about whether the agrochemicals are allocated efficiently from economic perspective. We use a translog production function and the inputs and outputs data of vegetable production in 34 Chinese cities during 2004–2017 to calculate agrochemicals allocation efficiency for both open-field and greenhouse vegetables. We find that the agrochemicals are allocated inefficiently due to overuse for both open-field and greenhouse vegetables, whereas the overuse degree of chemical fertilizer used in greenhouse vegetables is lower than that of open-field vegetables during a growing duration. In addition, we also find that the application levels of agrochemicals for greenhouse vegetables per mu (15 mu = 1 hectare) are higher than those of open-field vegetables, but the application levels of agrochemicals for per kilogram greenhouse vegetables are significantly lower. We conclude that the overuse of agrochemicals in greenhouse production system may attribute to the year-round production of greenhouse vegetables induced by economic incentives. Therefore, reducing the number of production rotations may be an effective method to alleviate the overuse of agrochemicals in greenhouse vegetables.
Enhanced lipid production by addition of malic acid in fermentation of recombinant Mucor circinelloides Mc-MT-2
Authors: Zhang Yao , Liu Qing , Li Pengcheng , Wang Yanxia , Li Shaoqi , Gao Meng , Song Yuanda 
Published: June 2021

AbstractIn our previous work, we reported a novel approach for increasing lipid production in an oleaginous fungus Mucor circinelloides by overexpression of mitochondrial malate transporter protein. This transporter plays a vital role in fatty acid biosynthesis during malate and citrate transport systems in oleaginous fungi. In this study, the controlling metabolic supplementation strategy was used to improve the lipid production by overexpression of malate transporter protein in M. circinelloides strain coded as Mc-MT-2. The effects of different metabolic intermediates on lipid production in batch fermentation by Mc-MT-2 were investigated. The optimal lipid production was obtained at 0.8% malic acid after 24 h of fermentation. Furthermore, in fed-batch bioreactors containing glucose as a carbon source supplemented with malic acid, the highest cell growth, and lipid production were achieved. The resulting strain showed the fungal dry biomass of 16 g/L, a lipid content of 32%, lipid yield of 5.12 g/L in a controlled bench-top bioreactor, with 1.60-, 1.60- and 2.56-fold improvement, respectively, compared with the batch control without supplementation of malic acid. Our findings revealed that the addition of malic acid during fermentation might play an important role in lipid accumulation in the recombinant M. circinelloides Mc-MT-2. This study provides valuable insights for enhanced microbial lipid production through metabolic supplementation strategy in large scale and industrial applications.