bluuebunny/crossref_metadata_2025_split huggingface dataset:
Identification of a Novel Secreted Metabolite Cyclo(Phenylalanyl-Prolyl) from Batrachochytrium Dendrobatidis and its effect on Galleria Mellonella.
Authors: Starr Amanda Michelle , Zabet-Moghaddam Masoud , Francisco Michael San 
Published: December 2021

Abstract
The fungus, Batrachochytrium dendrobatidis, is the causative agent of chytridiomycosis and a leading cause of global decline in amphibian populations . The first stages of chytridiomycosis include: inflammation, hyperkeratosis, lethargy, loss of righting reflex, and disruption of internal electrolyte levels leading to eventual death of the host. Previous work indicates that B. dendrobatidis can produce immunomodulatory compounds and other secreted molecules that regulate the growth of the fungus. In this study, filtrates of the fungus grown in media and water were subjected to ultra performance liquid chromatography-mass spectrometry and analyzed using Compound Discoverer 3.0. Identification of cyclo(phenylalanyl-prolyl), chitobiose, and S-adenosylmethionine were verified by their retention times and fragmentation patterns from B. dendrobatidis supernatants. Previous studies have analyzed the effects of B. dendrobatidis on amphibian models, in vitro, or in cell culture. We studied the effects of live B. dendrobatidis cells, spent culture filtrates containing secreted metabolites, and cyclo(pheylalanyl-prolyl) on wax moth larvae ( Galleria mellonella) . Concentrated filtrates caused melanization within 24 hours, while live B. dendrobatidis caused melanization within 48 hours. Our results indicate B. dendrobatidis produces secreted metabolites previously unreported. These findings provide another alternative for the use of a non-amphibian model system to study pathogenicity traits in this fungus.
Single-Cell RNA-Seq Analysis of Diabetic Wound Macrophages in STZ-Induced Mice
Authors: Yin Siyuan , Ma Jiaxu , Song Ru , Liu Chunyan , Cao Guoqi , Zhang Guang , Wu Zhenjie , Zhang Huayu , Sun Rui , Chen Aoyu , Wang Yibing 
Published: December 2021

Abstract
Background: The crucial role of macrophages in the healing of chronic diabetic wounds is widely known, but previous in vitro classification and marker genes of macrophages may not be fully applicable to cells in the microenvironment of chronic wounds. The heterogeneity of macrophages was studied and classified at the single-cell level in a chronic wound model. Results: We performed single-cell sequencing of CD45+ immune cells within the wound edge and obtained 17 clusters of cells, including 4 clusters of macrophages. One of these clusters is a previously undescribed population of macrophages possessing osteoclast gene expression, for which analysis of differential genes revealed possible functions. We also analysed the differences in gene expression between groups of macrophages in the control and diabetic wound groups at different sampling times. Conclusions: we described the differentiation profile of mononuclear macrophages, which has provided an important reference for the study of immune-related mechanisms in diabetic chronic wounds.
Seismic Precursors to the Whakaari 2019 Phreatic Eruption detected in Five Other Volcanoes
Authors: Ardid Alberto , Dempsey David , Caudron Corentin , Cronin Shane 
Published: December 2021

Abstract
Volcanic eruptions that occur without warning can be deadly in touristic and populated areas. Even with real-time geophysical monitoring, forecasting sudden eruptions is difficult because their precursors are hard to recognize and can vary between volcanoes. Here, we describe a general seismic precursor signal for gas-driven eruptions, identified through correlation analysis of 18 well-recorded eruptions in New Zealand, Alaska and Kamchatka. We show that the displacement seismic amplitude ratio, a ratio between high and medium frequency volcanic tremor, has a characteristic rise in the days prior to eruptions that likely indicates formation of a hydrothermal seal that enables rapid pressurization. Applying this model to the fatal 2019 eruption at Whakaari (New Zealand), we identify pressurization in the week before the eruption, and cascading seal failure in the 16 hours prior to the explosion. This method for identifying and proving generalizable eruption precursors can help improve short term forecasting systems.
Comparative Phosphoproteomic Profiling in Prefrontal Cortex of Prenatal Stressed Offspring Rats
Authors: He Wei , Huang Huimei , Zhang Huiping , Sun Hongli 
Published: December 2021

Abstract
Background: Many investigations indicate that prenatal stress caused depressive-like disturbances in offspring rats. The underlying pathogenic mechanisms have not yet been fully unravelled. The PFC has been shown to play a role in susceptibility to stress during fetal, thus we focus our attention on differential protein phosphorylation in this region of PS-S(Susceptibility to PS) offspring rats.Method: SPT was used to screen for susceptibility to PS. The validity of prenatally stressed model was verified by other common depression-like behaviors. We used MS-based TMT quantitative proteomics in combination with phosphopeptide enrichment method to compare phosphoproteomic profiling in prefrontal cortex of of PS-S and CON offspring rats. Results: Totally, 3418 phosphoproteins, 8404 phosphopeptides and 12175 phosphosites were identified in this analysis. According to the screening criteria, 902 phosphopeptides increased and 609 decreased in the PFC of PS-S group compared to the control rats. GO enrichment analysis indicated that the main enriched terms in CC category were ‘synapse part’, ‘myelin sheath’, ‘synapse’, ‘neuron part’ and ‘axon’. The phosphorproteins enriched in MF and BP category were mainly related to cytoskeleton and projection morphogenesis associated proteins. KEGG pathway enrichment analyses identified 30 significant KEGG pathways, the top five pathways included salivary secretion, Endocrine and other factor-regulated calcium reabsorption, Pancreatic secretion and Insulin secretion. Motifs such as......_S_P...RR, ......_S_PE...., ......_S_PV...., ......_S_P.H...and ..S..._S_PT....were the top five motifs enriched in phosphorylated sites.Conclusion: PS may induce depressive-like behaviors in offspring rats through regulating the phosphorylation of protein mainly related to synapse, myelin sheath, neuron and cytoskeleton. And the phosphorylation of related proteins may act as key pathogenic hits. Data are available via ProteomeXchange with identifier PXD026563.
Investigation of Droplet Size Distribution for Vibrating Mesh Atomizer
Authors: Sharma Pallavi , Quazi Mohammed , Vazquez Irma Rocio , Jackson Nathan 
Published: December 2021

Abstract
Vibrating mesh atomizers (VMA) are increasing in demand for various aerosol applications due to their ability to generate uniformly sized droplets. Currently there are two types of VMA (commercial metallic membranes and silicon based). High Uniformity and control of small droplet size are the basic requirements for many aerosol applications, for which ultrasonic or VMA are employed. However, there is limited research on understanding the droplet size distribution of different types of atomizers. In this study three aerosol generators were investigated: Ultrasonic, metallic VMA, and MEMS-based silicon VMA. The primary objective was to compare these devices on droplet size distribution and mechanism of action. A systematic study to compare the performance of the two VMA was investigated based on droplet distribution, volumetric median diameter (VMD) using liquids with different physiochemical properties. Size distribution of the droplet produced by the metallic VMA was twice the span compared to silicon VMA for fluids with viscosity <2cP. The metallic VMA also resulted in an increase in VMD as the viscosity increased, whereas the Si VMA did not see a significant increase in VMD. The silicon-based VMA demonstrated a 4-15x increase in fine particle fraction control compared to metallic VMA. The results demonstrate that silicon based VMA has narrower droplet distribution with more uniform droplet size and lower span compared to metallic VMA.
The German Quality Network Sepsis: Evaluation of a Quality Collaborative on Decreasing Sepsis-Related Mortality in a Quasi-Experimental Difference-in-Differences Design
Authors: Schwarzkopf Daniel , Rüddel Hendrik , Brinkmann Alexander , Fleischmann-Struzek Carolin , Friedrich Marcus E. , Glas Michael , Gogoll Christian , Gründling Matthias , Meybohm Patrick , Pletz Mathias W. , Schreiber Torsten , Thomas-Rüddel Daniel O. , Reinhart Konrad 
Published: December 2021

Abstract
BackgroundSepsis is one of the leading causes of preventable deaths in hospitals. This study presents the evaluation of a quality collaborative network, which aimed to decrease sepsis-related hospital mortality.MethodsThe German Quality Network Sepsis (GQNS) offers quality reporting based on claims data, peer reviews, and support for establishing continuous quality improvement and staff education to participating hospitals. The primary outcome of the evaluation was all-cause risk-adjusted hospital mortality among cases with sepsis per hospital. Sepsis was identified by ICD-10 codes in claims data for sepsis with organ dysfunction or septic shock according to the sepsis-1 definition. To evaluate the effect of the GQNS, the change in outcomes from a retrospective baseline (January 2014 – March 2016) to the intervention phase (April 2016 – June 2018) was compared between the hospitals in the GQNS and the national German diagnosis-related-groups statistics. Tests were conducted by interrupted time-series analyses using hierarchical models. Implementation processes and barriers were assessed by a survey of local leaders of quality improvement teams in autumn 2018.ResultsSeventy-four hospitals participated, of which 17 were university hospitals and 18 were tertiary care facilities. Observed mortality was 43.5% during baseline period and 42.7% during intervention period. Interrupted time-series analyses did not show effects on course or level of risk-adjusted mortality of cases with sepsis compared to the national DRG-statistics after the beginning of the intervention period (p=0.632, and p=0.512, respectively). There were also no significant effects in the subgroups of patients with septic shock or ventilation >24h or subgroups of hospitals. Surveys among 48 local quality improvement leaders revealed that most hospitals did not succeed in implementing a continuous quality improvement program or relevant measures to improve early recognition and treatment of sepsis. Barriers perceived most commonly were lack of time (77.6%), staff shortage (59.2%), and lack of participation of relevant departments (38.8%).ConclusionsAs long as hospital-wide sepsis quality improvement efforts will not become a high priority for the hospital leadership by assuring adequate resources and involvement of all pertinent stakeholders, voluntary initiatives to improve the quality of sepsis care will remain prone to failure.
Effects of Iron Deficiency Stress on Plant Growth and Quality in Flowering Chinese Cabbage and Its Adaptive Response
Authors: Yang Xian 
Published: December 2021

Abstract
Iron (Fe) plays an important role in the growth and development of the human body and plants. The effects of different Fe concentrations, 1-aminocyclopropane-1-carboxylic acid (ACC), and cobalt chloride (Co2+) treatments on plant growth, quality and the adaptive response to Fe deficiency stress were investigated in flowering Chinese cabbage. The results revealed that Fe deficiency stress inhibited plant growth. The content of vitamin C (Vc), soluble protein, and soluble sugar in leaves and stalks were significantly reduced under Fe deficiency stress, while the content of cellulose and nitrate was increased. Meanwhile, Fe deficiency stress obviously reduced the net photosynthetic rate and nitrate reductase (NR) activity of leaves. The balance system of active oxygen metabolism was destroyed due to Fe deficiency, resulting in the decrease of catalase (CAT) activity, superoxide dismutase (SOD) activity of roots and leaves, and peroxidase (POD) activity of leaves, while POD activity in roots and malonaldehyde (MDA) content were significantly increased. The treatments of Fe deficiency and ACC significantly reduced pH value of the root medium, promoted release of ethylene, and increased Fe3+ reductase activity, while Co2+ treatment showed the results opposite to those of Fe deficiency and ACC treatments. Thus, Fe deficiency stress could induce nitrogen metabolism, photosynthesis, reactive oxygen metabolism, pH of root medium, and Fe3+ reductase activity that was related to physiological adaptive response and tolerance mechanisms. We also found that ethylene could involve in regulating the adaptive response to Fe deficiency stress and improve the availability of Fe in flowering Chinese cabbage.Main ConclusionFe deficiency stress could induce nitrogen metabolism, photosynthesis, reactive oxygen metabolism, pH of root medium, and Fe3+ reductase activity that was related to physiological adaptive response and tolerance mechanisms.
Syrian Refugee Crisis in Turkey: Is Migration from Syria Bad for Turkey’s demographic and economic structure?
Authors: Altun Ali Erdem 
Published: December 2021

Abstract
The main objective of this paper is to understand whether international migration is detrimental for the host country or not by using the example of Turkey. This paper primarily claims that refugees are beneficial for the host country Turkey as they stimulate the economy while integrating into the society they live in and taking the jobs that native people aren't enthusiastic about doing. As a result, they are easing the burden on the insurance system. From a demographical and a sociological perspective, they are increasing the rate of population in territories of Turkey where the fertility rate has declined. However, some economists and sociologists argue those claims with some counterarguments, which this paper is refuting. They claim that refugees have a terrible influence on Turkey’s economy and the country's wellbeing by overburdening schools and healthcare facilities, boosting the crime rates, spreading disease, and heating the wage competition.
Anteroinferior Bundle of The Acromioclavicular Ligament Plays a Substantial Role in The Joint Function During Shoulder Elevation and Horizontal Adduction: A Dynamic Finite Element Model.
Authors: Garcia Ausberto Velasquez , Castillo Farid Salamé , Ekdahl Max , Mardones Joaquin Mura 
Published: December 2021

Abstract
Background: Postoperative acromioclavicular (AC) ligament deficiency has been identified as a common cause of failure after isolated coracoclavicular reconstruction. The two-bundle arrangement of the acromioclavicular ligament has recently been reported in histological and anatomical research. In addition, a clear structural advantage of the superoposterior bundle (SPB) over the less consistent anteroinferior bundle (AIB) was also found. However, the current understanding of the function of the acromioclavicular ligament in joint stability is based on uniaxial bone loading experiments and sequential ligament sectioning. Consequently, these rigid biomechanics models do not reproduce the coupled physiological kinematics, neither in the normal joint nor in the postoperative condition. Therefore, our goal was to build a dynamic finite element model to study the function of the acromioclavicular ligament based on its biomechanical performance patterns using the benefits of computational models.Methods: A three-dimensional bone model is reconstructed using images from a healthy shoulder. The ligament structures were modeled according to the architecture and dimensions of the bone. The kinematics conditions for the shoulder girdle were determined after the osseous axes aligned to simulate the shoulder elevation in the coronal plane and horizontal adduction. Three patterns evaluated ligament function. The peak von Mises stress values were recorded using a clock model that identified the stress distribution. In addition, the variation in length and displacement of the ligament during shoulder motion were compared using a two-tailed hypotheses test. P values < 0.01 were considered statistically significant.Results: The peak von Mises stress was consistently observed in the AIB at 2:30 in coronal elevation (4.058 MPa) and horizontal adduction (2.323 MPa). Except in the position 2:00, statistically significant higher deformations were identified in the two bundles during shoulder elevation. The highest ligament displacement was observed on the Y- and Z- axes. Conclusions: The AIB has the primary role in restricting the acromioclavicular joint during shoulder motion, even though the two bundles of the AC ligament have a complementary mode of action. During horizontal adduction, the SPB appears to prevent anterior and superior translation.
Clinical Characteristics of Comorbid Retinal Dystrophies and Primary Angle Closure Disease
Authors: Parameswarappa Deepika , Doctor Mariya Bashir , Natarajan Ramya , MS Padmaja Kumari Rani , Garudadri Chandrasekhar , Jalali Subhadra , Senthil Sirisha 
Published: December 2021

Abstract
Purpose: To assess the clinical characteristics of comorbid retinal dystrophies and primary angle closure disease.Design: Retrospective study from January 1992 to June 2020.Methods: This descriptive study included 92 eyes of 46 patients with comorbid retinal dystrophies and primary angle closure disease (PACD) that included eyes with primary angle closure suspect, primary angle closure and primary angle closure glaucoma. Demographic profile, clinical characteristics of PACD and its association with retinal dystrophies are described. Results: The study included 46 patients (92 eyes). Males were majority, 63%. Mean (± standard deviation) age when retinal dystrophy was diagnosed was 29.6 ± 9.4 years and PACD was diagnosed at 32.23±7.92 years. Mean BCVA at presentation was 1.07±0.87 log MAR (95% confidence interval (CI):0.87,1.26). Mean Intraocular pressure at diagnosis of glaucoma was 27±16 mmHg (95% CI:23.5,31.5 mmHg). The most common retinal dystrophy associated with PACD was retinitis pigmentosa (RP) followed by RP with retinoschisis. The hospital-based prevalence of PACD among all patients with RP and retinoschisis was 0.19% and 0.15% respectively. Laser peripheral iridotomy (LPI) was performed in 74 eyes (80.5%). Glaucoma was managed medically in majority of the eyes (58 eyes, 63.04%) and minority required surgical management with trabeculectomy (11, 11.9%). Conclusion: Retinitis pigmentosa is the most common retinal dystrophy associated with PACD. Comorbid PACD in eyes with retinal dystrophies was observed in 2nd to 3rd decade of life. This calls for screening for angle closure in eyes with retinal dystrophies from second decade onwards to identify the comorbid PACD and treat or refer them appropriately.
Diabetes Type 2 in the Berlin Aging Study II: Prevalence, Incidence and Severity Over up to Ten Years of Follow-up
Authors: Spieker Johanne , Vetter Valentin Max , Spira Dominik , Steinhagen-Thiessen Elisabeth , Regitz-Zagrosek Vera , Buchmann Nikolaus , Demuth Ilja 
Published: December 2021

Abstract
Aim: To describe the prevalence, incidence, and severity of diabetes mellitus type 2 (T2D) and antidiabetic medication in older people and to assess the prognostic value of diagnostic laboratory parameters.Methods: Baseline data of 1,671 participants of the Berlin Aging Study II (68.8 ±3.7 years) and follow-up data assessed 7.4 ±1.5 years later were analysed. T2D was diagnosed based on self-report, antidiabetic medication use, laboratory parameters. T2D severity was determined by the diabetes complications severity index (DCSI). Prognostic capacity of laboratory parameters was evaluated by Receiver Operating Characteristics (ROC) and Areas Under the Curve (AUCs).Results: The proportion of participants with T2D increased from 12.9% (37.3% women) at baseline to 17.1% (41.1% women) with 74 incident cases and 22.2% not being aware of the disease at follow-up. More than half of the 41 newly identified incident T2D cases were diagnosed solely by the 2h-plasma glucose test (OGTT) and diagnosis based on OGTT as the only criterion among incident cases was found more frequently in women (p=0.028). The OGTT assessed at baseline predicted incident T2D less accurate in men (AUC: 0.671, 95% CI 0.570-0.771) when compared to women (AUC: 0.7893, 95% CI 0.7036-0.8751). No sex differences were detected with respect to antidiabetic medication used and T2D severity. Conclusions: A comprehensive picture of T2D with respect to prevalence, incidence, and severity in older people is provided. Clinically relevant sex differences in the capacity of the commonly used T2D diagnostic laboratory parameters to predict incident T2D on average 7.4 years later were detected.
Stable near-to-ideal performance of a solution-grown single-crystal perovskite X-ray detector
Authors: Kovalenko Maksym , Sakhatskyi Kostiantyn , Turedi Bekir , Matt Gebhard , Lintangpradipto Muhammad , Naphade Rounak , Mohammed Omar , Yakunin Sergii , Bakr Osman 
Published: December 2021

Abstract
The ideal photodetector is the one able to detect every single incoming photon. In particular, in X-ray medical imaging, the radiation dose for patients can then approach its fundamentally lowest limit set by the Poisson photon statistics. Such near-to-ideal X-ray detection characteristics have been demonstrated with only a few semiconductor materials such as Si1 and CdTe2; however, their industrial deployment in medical diagnostics is still impeded by elaborate and costly fabrication processes. Hybrid metal halide perovskites – newcomer semiconductors -– make for a viable alternative3,4,5 owing to their scalable, inexpensive, robust, and versatile solution growth and recent demonstrations of single gamma-photon counting under high applied bias voltages6,7. The major hurdle with perovskites as mixed electronic-ionic conductors, however, arises from the rapid material's degradation under high electric field8,9,10,11, thus far used in perovskite X-ray detectors12,13. Here we show that both near-to-ideal and long-term stable performance of perovskite X-ray detectors can be attained in the photovoltaic mode of operation at zero-voltage bias, employing thick and uniform methylammonium lead iodide (MAPbI3) single crystal (SC) films (up to 300 µm), solution-grown directly on hole-transporting electrodes. The operational device stability is equivalent to the intrinsic chemical shelf lifetime of MAPbI3, being at least one year in the studied case. Detection efficiency of 88% and noise equivalent dose of 90 pGyair (lower than the dose of a single incident photon) are obtained with 18 keV X-rays, allowing for single-photon counting, as well as low-dose and energy-resolved X-ray imaging. These findings benchmark hybrid perovskites as practically suited materials for developing low-cost commercial detector arrays for X-ray imaging technologies.