bluuebunny/crossref_metadata_2025_split huggingface dataset:
Large impact cratering during lunar magma ocean solidification
Authors: Miljković K. , Wieczorek M. A. , Laneuville M. , Nemchin A. , Bland P. A. , Zuber M. T. 
Published: September 2021

AbstractThe lunar cratering record is used to constrain the bombardment history of both the Earth and the Moon. However, it is suggested from different perspectives, including impact crater dating, asteroid dynamics, lunar samples, impact basin-forming simulations, and lunar evolution modelling, that the Moon could be missing evidence of its earliest cratering record. Here we report that impact basins formed during the lunar magma ocean solidification should have produced different crater morphologies in comparison to later epochs. A low viscosity layer, mimicking a melt layer, between the crust and mantle could cause the entire impact basin size range to be susceptible to immediate and extreme crustal relaxation forming almost unidentifiable topographic and crustal thickness signatures. Lunar basins formed while the lunar magma ocean was still solidifying may escape detection, which is agreeing with studies that suggest a higher impact flux than previously thought in the earliest epoch of Earth-Moon evolution.
Distinct neural sources underlying visual word form processing as revealed by steady state visual evoked potentials (SSVEP)
Authors: Wang Fang , Kaneshiro Blair , Strauber C. Benjamin , Hasak Lindsey , Nguyen Quynh Trang H. , Yakovleva Alexandra , Vildavski Vladimir Y. , Norcia Anthony M. , McCandliss Bruce D. 
Published: September 2021

AbstractEEG has been central to investigations of the time course of various neural functions underpinning visual word recognition. Recently the steady-state visual evoked potential (SSVEP) paradigm has been increasingly adopted for word recognition studies due to its high signal-to-noise ratio. Such studies, however, have been typically framed around a single source in the left ventral occipitotemporal cortex (vOT). Here, we combine SSVEP recorded from 16 adult native English speakers with a data-driven spatial filtering approach—Reliable Components Analysis (RCA)—to elucidate distinct functional sources with overlapping yet separable time courses and topographies that emerge when contrasting words with pseudofont visual controls. The first component topography was maximal over left vOT regions with a shorter latency (approximately 180 ms). A second component was maximal over more dorsal parietal regions with a longer latency (approximately 260 ms). Both components consistently emerged across a range of parameter manipulations including changes in the spatial overlap between successive stimuli, and changes in both base and deviation frequency. We then contrasted word-in-nonword and word-in-pseudoword to test the hierarchical processing mechanisms underlying visual word recognition. Results suggest that these hierarchical contrasts fail to evoke a unitary component that might be reasonably associated with lexical access.
The effect of national protest in Ecuador on PM pollution
Authors: Zalakeviciute Rasa , Alexandrino Katiuska , Mejia Danilo , Bastidas Marco G. , Oleas Nora H. , Gabela Diana , Chau Phuong Ngoc , Bonilla-Bedoya Santiago , Diaz Valeria , Rybarczyk Yves 
Published: September 2021

AbstractParticulate matter (PM) accounts for millions of premature deaths in the human population every year. Due to social and economic inequality, growing human dissatisfaction manifests in waves of strikes and protests all over the world, causing paralysis of institutions, services and circulation of transport. In this study, we aim to investigate air quality in Ecuador during the national protest of 2019, by studying the evolution of PM2.5 (PM ≤ 2.5 µm) concentrations in Ecuador and its capital city Quito using ground based and satellite data. Apart from analyzing the PM2.5 evolution over time to trace the pollution changes, we employ machine learning techniques to estimate these changes relative to the business-as-usual pollution scenario. In addition, we present a chemical analysis of plant samples from an urban park housing the strike. Positive impact on regional air quality was detected for Ecuador, and an overall − 10.75 ± 17.74% reduction of particulate pollution in the capital during the protest. However, barricade burning PM peaks may contribute to a release of harmful heavy metals (tire manufacture components such as Co, Cr, Zn, Al, Fe, Pb, Mg, Ba and Cu), which might be of short- and long-term health concerns.
Cystin genetic variants cause autosomal recessive polycystic kidney disease associated with altered Myc expression
Authors: Yang Chaozhe , Harafuji Naoe , O’Connor Amber K. , Kesterson Robert A. , Watts Jacob A. , Majmundar Amar J. , Braun Daniela A. , Lek Monkol , Laricchia Kristen M. , Fathy Hanan M. , Mane Shrikant , Shril Shirlee , Hildebrandt Friedhelm , Guay-Woodford Lisa M. 
Published: September 2021

AbstractMutation of the Cys1 gene underlies the renal cystic disease in the Cys1cpk/cpk (cpk) mouse that phenocopies human autosomal recessive polycystic kidney disease (ARPKD). Cystin, the protein product of Cys1, is expressed in the primary apical cilia of renal ductal epithelial cells. In previous studies, we showed that cystin regulates Myc expression via interaction with the tumor suppressor, necdin. Here, we demonstrate rescue of the cpk renal phenotype by kidney-specific expression of a cystin-GFP fusion protein encoded by a transgene integrated into the Rosa26 locus. In addition, we show that expression of the cystin-GFP fusion protein in collecting duct cells down-regulates expression of Myc in cpk kidneys. Finally, we report the first human patient with an ARPKD phenotype due to homozygosity for a deleterious splicing variant in CYS1. These findings suggest that mutations in Cys1/CYS1 cause an ARPKD phenotype in mouse and human, respectively, and that the renal cystic phenotype in the mouse is driven by overexpression of the Myc proto-oncogene.
Tea plantations and their importance as host plants and hot spots for epiphytic cryptogams
Authors: Wolski Grzegorz J. , Piwowarczyk Renata , Plášek Vítězslav , Kukwa Martin , Ruraż Karolina 
Published: September 2021

AbstractBryophytes and lichens are outstanding bioindicators, not only of the plant community in which they develop, but also the substrates on which they grow. Some epiphytic cryptogams, particularly the rare ones, are stenotopic and require a long habitat continuity, for example substrates such as old trees. It could also be a tea plantation, this is because the shrubs are not felled, and most of them may have several dozen years. In addition, the shrubs are not subject to sudden changes in microclimatic conditions as only the young leaves are harvested. As the importance of tea plantations as host plants for mosses and lichens has not yet been studied, the present study examines the species diversity of cryptogams of two tea plantations in Georgia (Caucasus). The study also examines the phytogeography, spatial pattern, environmental conditions and ecological indicators of the cryptogams. Thirty-nine cryptogam taxa were identified; typical forest taxa dominated, even in the absence of typical forest communities. Some of these species are obligatory epiphytes, rare or even critically endangered in most European countries (e.g., Orthotrichum stellatum, O. stramineum, Lewinskya striata). The fairly abundant record of such species on tea plantations indicates the importance of these phytocoenoses for the preservation of rare species, and indicates that these habitats are hot spots for these cryptogams in otherwise changed envirnonment. Additionally, as indicated the analysis of the species composition of individual plantations and the mathematical analysis made on this basis, plantations differ from each other. Another interesting result is also the spatial distributions of cryptogams on tea bushes resemble those of forest communities and lichens seems to be more sensitive than bryophytes to antropogenic changes of environment.
Dynamic alignment changes during level walking in patients with dropped head syndrome: analyses using a three-dimensional motion analysis system
Authors: Igawa Tatsuya , Ishii Ken , Suzuki Akifumi , Ui Hideto , Urata Ryunosuke , Isogai Norihiro , Sasao Yutaka , Nishiyama Makoto , Funao Haruki 
Published: September 2021

AbstractIn patients with dropped head syndrome (DHS), cervical malalignment is one of the risk factors for impaired horizontal gaze and restrictions to ambulation. The characteristics of gait in patients with DHS have not been clarified biomechanically from the viewpoint of dynamic alignment and lower limb kinematics. This study aimed to clarify kinematic and kinetic differences during level walking in patients with DHS compared to the healthy elderly. Twelve patients with DHS and healthy elderly individuals performed level walking at a self-selected speed. Spatiotemporal, kinematic, and kinetic data were recorded using a three-dimensional motion analysis system. Statistical analysis was performed to compare these data between the two groups, respectively. Compared with the healthy elderly, stride length and peak hip-joint extension angle in patients with DHS were significantly shorter and smaller. The thorax was also significantly tilted backwards. Peak ankle-joint plantar-flexion moment was significantly smaller despite larger dorsiflexion angle compared with the healthy elderly. The walking of DHS patients demonstrated kinematic and kinetic characteristics of the lower limb joints and alignment of the thorax and pelvis corresponding to their short stride and walking speed.
Development of a highly sensitive chemiluminescent enzyme immunoassay for fragmented cytokeratin 18 using new antibodies
Authors: Yamada Minori , Eguchi Akiko , Okuno Koji , Sakaguchi Koji , Yamaguchi Tetsuji 
Published: September 2021

AbstractFragmented cytokeratin 18 (fCK18) released from epithelial cells undergoing apoptosis is widely studied in various diseases. However, fCK18 measurement is not utilized in clinical practice due to imprecise disease-state cutoff values. Therefore, we set out to generate new monoclonal antibodies (mAbs) and a recombinant fCK18 (rfCK18) calibrator in an effort to develop a highly sensitive chemiluminescent enzyme immunoassay (CLEIA). New capture mAb (K18-624) had a high binding ability compared to the current commercial antibody. New detection mAb (K18-328) recognized 323S-340G of CK18. A rfCK18 was expressed in the soluble fraction of E. coli when the N-terminal region (260 amino acid residues) of CK18 was truncated. Analysis of performance and measurement of human fCK18 were evaluated using K18-624 and K18-328 in a highly sensitive CLEIA. The coefficients of variation (CV) for within-run and between-day repeatability were below 10% and the recoveries were in the range of 15%. The detection sensitivity was 0.056 ng/mL. Serum fCK18 levels were significantly increased in non-alcoholic steatohepatitis (NASH) patients when compared to healthy individuals. Our new fCK18 mAbs showed high affinity and sensitivity. CLEIA using our new antibodies will be useful in measuring fCK18 in human blood thereby generating accurate clinical diagnoses of human liver diseases.
Assessment of quality and pre-clinical efficacy of a newly developed polyvalent antivenom against the medically important snakes of Sri Lanka
Authors: Patra Aparup , Kalita Bhargab , Khadilkar Milind V. , Salvi Nitin C. , Shelke Pravin V. , Mukherjee Ashis K. 
Published: September 2021

AbstractSnake envenomation is a severe problem in Sri Lanka (SL) and Indian polyvalent antivenom (PAV) is mostly used for treating snakebite albeit due to geographical variation in venom composition, Indian PAV shows poor efficacy in neutralizing the lethality and toxicity of venom from the same species of snakes in SL. Therefore, the quality and in vivo venom neutralization potency of a country-specific PAV produced against the venom of the five most medically important snakes of SL (Daboia russelii, Echis carinatus, Hypnale hypnale, Naja naja, Bungarus caeruleus) was assessed. LC-MS/MS analysis of two batches of PAV showed the presence of 88.7–97.2% IgG and traces of other plasma proteins. The tested PAVs contained minor amounts of undigested IgG and F(ab′)2 aggregates, showed complement activation, were devoid of IgE, endotoxin, and content of preservative was below the threshold level. Immunological cross-reactivity and in vitro neutralization of enzymatic activities, pharmacological properties demonstrated superior efficacy of SL PAV compared to Indian PAV against SL snake venoms. The in vivo neutralization study showed that the tested PAVs are potent to neutralize the lethality and venom-induced toxicity of SL snake venoms. Therefore, our study suggests that introduction of SL-specific PAV will improve snakebite management in SL.
GIS-based framework for artificial aquifer recharge to secure sustainable strategic water reserves in Qatar arid environment peninsula
Authors: Mohieldeen Yasir Elginaid , Elobaid Elnaiem Ali , Abdalla Rifaat 
Published: September 2021

AbstractThis study proposes a large-scale artificial aquifer recharge plan to increase the strategic water reserve to cope with future emergencies. The main aim of the plan is to restore groundwater levels to those of the 1980s through artificial recharge. Desalinated water or highly treated municipal sewage effluent could be artificially recharged into the aquifer to recharge it. Potentiometric surface of aquifers and Geographic Information Systems (GIS) analysis were used to assess change in the groundwater levels between 1980 and 2009. Zones that have experienced considerable decline in groundwater levels from their former “natural” status—when the aquifers were barely exploited, were identified. These zones are considered optimum recharge sites as they could provide ‘natural’ ground storage chosen by nature. Therefore, working with nature (not against it) by re-filling these natural spaces is the optimum approach. The artificial recharge of the main and principal upper aquifer in Qatar (Rus and Um er Radhuma) is targeted and recommended. It is estimated that up to 182.8 Million Cubic Meter (mcm) could be recharged and stored in these proposed zones, to increase the strategic water reserve of the country. This increase would sustain supplies of high quality for up to three months if consumption is maintained at the 2018 level. Moreover, this additional reserve could last for over one year, if emergency measures were put in place—in case of serious water-shortages, and disaster preparedness, for example by reducing the per capita consumption to the global average per capita consumption.
Kinematics and observer-animator kinematic similarity predict mental state attribution from Heider–Simmel style animations
Authors: Schuster Bianca A. , Fraser Dagmar S. , van den Bosch Jasper J. F. , Sowden Sophie , Gordon Andrew S. , Huh Dongsung , Cook Jennifer L. 
Published: September 2021

AbstractThe ability to ascribe mental states, such as beliefs or desires to oneself and other individuals forms an integral part of everyday social interaction. Animations tasks, in which observers watch videos of interacting triangles, have been extensively used to test mental state attribution in a variety of clinical populations. Compared to control participants, individuals with clinical conditions such as autism typically offer less appropriate mental state descriptions of such videos. Recent research suggests that stimulus kinematics and movement similarity (between the video and the observer) may contribute to mental state attribution difficulties. Here we present a novel adaptation of the animations task, suitable to track and compare animation generator and -observer kinematics. Using this task and a population-derived stimulus database, we confirmed the hypotheses that an animation’s jerk and jerk similarity between observer and animator significantly contribute to the correct identification of an animation. By employing random forest analysis to explore other stimulus characteristics, we reveal that other indices of movement similarity, including acceleration- and rotation-based similarity, also predict performance. Our results highlight the importance of movement similarity between observer and animator and raise new questions about reasons why some clinical populations exhibit difficulties with this task.
Gamma irradiation exposure for collapsed cell junctions and reduced angiogenesis of 3-D in vitro blood vessels
Authors: Na Kyuhwan , Cho Youngkyu , Choi Dong-Hee , Park Myung-Jin , Yang Ji-hun , Chung Seok 
Published: September 2021

AbstractDuring radiotherapy, microenvironments neighboring the tumor are also exposed to gamma irradiation; this results in unexpected side effects. Blood vessels can serve as microenvironments for tumors and they play an important role in providing nutrients to tumors. This is mostly related to tumor progression, metastasis, and relapse after therapy. Many studies have been performed to obtain a better understanding of tumor vasculature after radiotherapy with in vitro models. However, compared to 3-D models, 2-D in vitro endothelial monolayers cannot physiologically reflect in vivo blood vessels. We previously remodeled the extracellular matrix (ECM) hydrogel that enhanced the tight barrier formation of 3-D blood vessels and the vascular endothelial growth factor (VEGF) gradient induced angiogenesis in a microfluidic device. In this study, the blood vessel model is further introduced to understand how gamma irradiation affects the endothelial monolayer. After the gamma irradiation exposure, we observed a collapsed endothelial barrier and a reduced angiogenic potential. Changes in the cell behaviors of the tip and stalk cells were also detected in the angiogenesis model after irradiation, which is difficult to observe in 2-D monolayer models. Therefore, the 3-D in vitro blood vessel model can be used to understand radiation-induced endothelial injuries.
Farming with Alternative Pollinators benefits pollinators, natural enemies, and yields, and offers transformative change to agriculture
Authors: Christmann Stefanie , Bencharki Youssef , Anougmar Soukaina , Rasmont Pierre , Smaili Moulay Chrif , Tsivelikas Athanasios , Aw-Hassan Aden 
Published: September 2021

AbstractLow- and middle-income countries cannot afford reward-based land sparing for wildflower strips to combat pollinator decline. Two small-grant projects assessed, if an opportunity-cost saving land-sharing approach, Farming with Alternative Pollinators, can provide a method-inherent incentive to motivate farmers to protect pollinators without external rewards. The first large-scale Farming-with-Alternative-Pollinators project used seven main field crops in 233 farmer fields of four agro-ecosystems (adequate rainfall, semi-arid, mountainous and oasis) in Morocco. Here we show results: higher diversity and abundance of wild pollinators and lower pest abundance in enhanced fields than in monocultural control fields; the average net-income increase per surface is 121%. The higher income is a performance-related incentive to enhance habitats. The income increase for farmers is significant and the increase in food production is substantial. Higher productivity per surface can reduce pressure on (semi)-natural landscapes which are increasingly used for agriculture. Land-use change additionally endangers biodiversity and pollinators, whereas this new pollinator-protection approach has potential for transformative change in agriculture.
Outcomes and longitudinal trend of traumatic cataract wound dehiscence in patients with blunt ocular injury
Authors: Hou Chiun-Ho , Lu Yu-Chin , Pu Christy , Chang Yin-Hsi , Lin Ken-Kuo , Lee Jiahn-Shing , Chen Kuan-Jen 
Published: September 2021

AbstractLongitudinal trends on traumatic cataract wound dehiscence are scant. In this study, we present the characteristics of traumatic cataract wound dehiscence using 15 years of longitudinal trend in one of the largest medical centers in Taiwan for a period when cataract surgeries were gradually shifting from extracapsular cataract extraction (ECCE) to phacoemulsification. All patients with a prior cataract surgery who suffered from blunt open globe trauma between 2001 and 2015 at a tertiary referral center in Taiwan were included. The number of cases per year; type of prior cataract surgery; visual acuity (VA); mechanism and place of injury were analyzed. The risk factors associated with final VA were investigated in patients followed up for ≥ 1 month. Seventy-six eyes of 75 patients were included and all of them were traumatic cataract wound dehiscence with a prior ECCE (65 eyes) or phacoemulsification. The most common mechanism and place of injury was fall and at home in both cataract surgical types. The mean log of the minimal angle resolution (logMAR) of final VA was 2.15 ± 0.88 (ECCE) and 1.61 ± 0.83 (phacoemulsification) (P = .026). The most significant risk factors associated with worse final VA were retinal detachment at the initial visit and low ocular trauma score (both P < .001). Long-term visual outcome of phacoemulsification wound dehiscence was better than that of ECCE wound after a blunt trauma.
In vivo generation of collagen specific Tregs with AAV8 suppresses autoimmune responses and arthritis in DBA1 mice through IL10 production
Authors: Wade Matthew , Fausther-Bovendo Hugues , De La Vega Marc-Antoine , Kobinger Gary 
Published: September 2021

AbstractAvailable therapeutics for autoimmune disorders focused on mitigating symptoms, rather than treating the cause of the disorder. A novel approach using adeno-associated virus (AAV) could restore tolerance to the autoimmune targets and provide a permanent treatment for autoimmune diseases. Here, we evaluated the ability of collagen II T-cell epitopes packaged in adeno-associated virus serotype 8 (AAV-8) vectors to reduce pathogenic cellular and humoral responses against collagen and to mitigate the disease in the collagen-induced arthritis mouse model. The cytokines and immune cells involved in the immune suppression were also investigated. Mice treated with AAV-8 containing collagen II T-cell epitopes demonstrated a significant reduction in the arthritis symptoms, pathogenic collagen specific antibody and T cell responses. The AAV-8 mediated immune suppression was mediated by increased interleukin-10 expression and regulatory T cells expansion. Altogether, this study strengthens the notion that AAV vectors are promising candidates for the treatment of autoimmune diseases.
Hypoxia increases KIAA1199/CEMIP expression and enhances cell migration in pancreatic cancer
Authors: Oba Takuya , Sato Norihiro , Adachi Yasuhiro , Amaike Takao , Kudo Yuzan , Koga Atsuhiro , Kohi Shiro , Hirata Keiji 
Published: September 2021

AbstractPancreatic ductal adenocarcinoma (PDAC) is characterised by dense desmoplasia and hypoxic microenvironment. Our previous reports demonstrated that hyaluronan (HA), especially low-molecular-weight HA, provides a favourable microenvironment for PDAC progression. However, the effect of hypoxia on HA metabolism remains unknown. Using quantitative real-time RT-PCR and western blot analysis, we analysed the changes in the expression of HA-synthesizing enzymes (HAS2 and HAS3) and HA-degrading enzymes (HYAL1, KIAA1199/CEMIP) in PDAC cell lines under hypoxic conditions. Hypoxia increased the mRNA and protein expression of KIAA1199, whereas it decreased HYAL1 expression. The expression of HAS3 was increased and HAS2 remained unchanged in response to hypoxia. The effect of KIAA1199 on hypoxia-induced cell migration was determined using a transwell migration assay and small-interfering RNA (siRNA). Hypoxia enhanced the migratory ability of PDAC cells, which was inhibited by KIAA1199 knockdown. We also used immunohistochemistry to analyse the protein expression of hypoxia inducible factor (HIF) 1α and KIAA1199 in PDAC tissues. There was a significant immunohistochemically positive correlation between KIAA1199 and HIF1α. These findings suggest that hypoxia-induced KIAA1199 expression may contribute to enhanced motility in PDAC.