bluuebunny/crossref_metadata_2025_split huggingface dataset:
A novel murine model to study the impact of maternal depression and antidepressant treatment on biobehavioral functions in the offspring
Authors: Scarborough Joseph , Mueller Flavia S. , Weber-Stadlbauer Ulrike , Mattei Daniele , Opitz Lennart , Cattaneo Annamaria , Richetto Juliet 
Published: May 2021

AbstractAntenatal psychopathology negatively affects obstetric outcomes and exerts long-term consequences on the offspring’s wellbeing and mental health. However, the precise mechanisms underlying these associations remain largely unknown. Here, we present a novel model system in mice that allows for experimental investigations into the effects of antenatal depression-like psychopathology and for evaluating the influence of maternal pharmacological treatments on long-term outcomes in the offspring. This model system in based on rearing nulliparous female mice in social isolation prior to mating, leading to a depressive-like state that is initiated before and continued throughout pregnancy. Using this model, we show that the maternal depressive-like state induced by social isolation can be partially rescued by chronic treatment with the selective serotonin reuptake inhibitor, fluoxetine (FLX). Moreover, we identify numerous and partly sex-dependent behavioral and molecular abnormalities, including increased anxiety-like behavior, cognitive impairments and alterations of the amygdalar transcriptome, in offspring born to socially isolated mothers relative to offspring born to mothers that were maintained in social groups prior to conception. We also found that maternal FLX treatment was effective in preventing some of the behavioral and molecular abnormalities emerging in offspring born to socially isolated mothers. Taken together, our findings suggest that the presence of a depressive-like state during preconception and pregnancy has sex-dependent consequences on brain and behavioral functions in the offspring. At the same time, our study highlights that FLX treatment in dams with a depression-like state can prevent abnormal behavioral development in the offspring.
NBR1 is a critical step in the repression of thermogenesis of p62-deficient adipocytes through PPARγ
Authors: Huang Jianfeng , Linares Juan F. , Duran Angeles , Xia Wenmin , Saltiel Alan R. , Müller Timo D. , Diaz-Meco Maria T. , Moscat Jorge 
Published: May 2021

AbstractActivation of non-shivering thermogenesis is considered a promising approach to lower body weight in obesity. p62 deficiency in adipocytes reduces systemic energy expenditure but its role in sustaining mitochondrial function and thermogenesis remains unresolved. NBR1 shares a remarkable structural similarity with p62 and can interact with p62 through their respective PB1 domains. However, the physiological relevance of NBR1 in metabolism, as compared to that of p62, was not clear. Here we show that whole-body and adipocyte-specific ablation of NBR1 reverts the obesity phenotype induced by p62 deficiency by restoring global energy expenditure and thermogenesis in brown adipose tissue. Impaired adrenergic-induced browning of p62-deficient adipocytes is rescued by NBR1 inactivation, unveiling a negative role of NBR1 in thermogenesis under conditions of p62 loss. We demonstrate that upon p62 inactivation, NBR1 represses the activity of PPARγ, establishing an unexplored p62/NBR1-mediated paradigm in adipocyte thermogenesis that is critical for the control of obesity.
Circulation of pertussis and poor protection against diphtheria among middle-aged adults in 18 European countries
Authors: Berbers Guy , van Gageldonk Pieter , Kassteele Jan van de , Wiedermann Ursula , Desombere Isabelle , Dalby Tine , Toubiana Julie , Tsiodras Sotirios , Ferencz Ildikó Paluska , Mullan Kathryn , Griskevicius Algirdas , Kolupajeva Tatjana , Vestrheim Didrik Frimann , Palminha Paula , Popovici Odette , Wehlin Lena , Kastrin Tamara , Maďarová Lucia , Campbell Helen , Ködmön Csaba , Bacci Sabrina , Barkoff Alex-Mikael , He Qiushui ,   the Serosurveillance Study Team, van Vliet Jeffrey , Bogaard Marjan , van Loghem Elske , van der Klis Fiona , Jasinska Joanna , Piérard Denis , Jørgensen Charlotte Sværke , Brisse Sylvain , Rapti Vasiliki , Molnar Zsuzsanna , Burke Deirdre , Lipnickiene Vilnele , Galajeva Jelena , Aase Audun , Moura Sofia , Leustean Mihaela , Brytting Mia , Vitek Marta , Avdicova Maria , Amirthalingam Gayatri , Mertsola Jussi 
Published: May 2021

AbstractReported incidence of pertussis in the European Union (EU) and the European Economic Area (EEA) varies and may not reflect the real situation, while vaccine-induced protection against diphtheria and tetanus seems sufficient. We aimed to determine the seroprevalence of DTP antibodies in EU/EEA countries within the age groups of 40–49 and 50–59 years. Eighteen countries collected around 500 samples between 2015 and 2018 (N = 10,302) which were analysed for IgG-DTP specific antibodies. The proportion of sera with pertussis toxin antibody levels ≥100 IU/mL, indicative of recent exposure to pertussis was comparable for 13/18 countries, ranging between 2.7–5.8%. For diphtheria the proportion of sera lacking the protective level (<0.1 IU/mL) varied between 22.8–82.0%. For tetanus the protection was sufficient. Here, we report that the seroprevalence of pertussis in these age groups indicates circulation of B. pertussis across EU/EEA while the lack of vaccine-induced seroprotection against diphtheria is of concern and deserves further attention.
AutoSpill is a principled framework that simplifies the analysis of multichromatic flow cytometry data
Authors: Roca Carlos P. , Burton Oliver T. , Gergelits Václav , Prezzemolo Teresa , Whyte Carly E. , Halpert Richard , Kreft Łukasz , Collier James , Botzki Alexander , Spidlen Josef , Humblet-Baron Stéphanie , Liston Adrian 
Published: May 2021

AbstractCompensating in flow cytometry is an unavoidable challenge in the data analysis of fluorescence-based flow cytometry. Even the advent of spectral cytometry cannot circumvent the spillover problem, with spectral unmixing an intrinsic part of such systems. The calculation of spillover coefficients from single-color controls has remained essentially unchanged since its inception, and is increasingly limited in its ability to deal with high-parameter flow cytometry. Here, we present AutoSpill, an alternative method for calculating spillover coefficients. The approach combines automated gating of cells, calculation of an initial spillover matrix based on robust linear regression, and iterative refinement to reduce error. Moreover, autofluorescence can be compensated out, by processing it as an endogenous dye in an unstained control. AutoSpill uses single-color controls and is compatible with common flow cytometry software. AutoSpill allows simpler and more robust workflows, while reducing the magnitude of compensation errors in high-parameter flow cytometry.
Genetic fate-mapping reveals surface accumulation but not deep organ invasion of pleural and peritoneal cavity macrophages following injury
Authors: Jin Hengwei , Liu Kuo , Tang Juan , Huang Xiuzhen , Wang Haixiao , Zhang Qianyu , Zhu Huan , Li Yan , Pu Wenjuan , Zhao Huan , He Lingjuan , Li Yi , Zhang Shaohua , Zhang Zhenqian , Zhao Yufei , Qin Yanqing , Pflanz Stefan , Kasmi Karim E. I. , Zhang Weiyi , Liu Zhaoyuan , Ginhoux Florent , Ji Yong , He Ben , Wang Lixin , Zhou Bin 
Published: May 2021

AbstractDuring injury, monocytes are recruited from the circulation to inflamed tissues and differentiate locally into mature macrophages, with prior reports showing that cavity macrophages of the peritoneum and pericardium invade deeply into the respective organs to promote repair. Here we report a dual recombinase-mediated genetic system designed to trace cavity macrophages in vivo by intersectional detection of two characteristic markers. Lineage tracing with this method shows accumulation of cavity macrophages during lung and liver injury on the surface of visceral organs without penetration into the parenchyma. Additional data suggest that these peritoneal or pleural cavity macrophages do not contribute to tissue repair and regeneration. Our in vivo genetic targeting approach thus provides a reliable method to identify and characterize cavity macrophages during their development and in tissue repair and regeneration, and distinguishes these cells from other lineages.
Microfluidic platform accelerates tissue processing into single cells for molecular analysis and primary culture models
Authors: Lombardo Jeremy A. , Aliaghaei Marzieh , Nguyen Quy H. , Kessenbrock Kai , Haun Jered B. 
Published: May 2021

AbstractTissues are complex mixtures of different cell subtypes, and this diversity is increasingly characterized using high-throughput single cell analysis methods. However, these efforts are hindered, as tissues must first be dissociated into single cell suspensions using methods that are often inefficient, labor-intensive, highly variable, and potentially biased towards certain cell subtypes. Here, we present a microfluidic platform consisting of three tissue processing technologies that combine tissue digestion, disaggregation, and filtration. The platform is evaluated using a diverse array of tissues. For kidney and mammary tumor, microfluidic processing produces 2.5-fold more single cells. Single cell RNA sequencing further reveals that endothelial cells, fibroblasts, and basal epithelium are enriched without affecting stress response. For liver and heart, processing time is dramatically reduced. We also demonstrate that recovery of cells from the system at periodic intervals during processing increases hepatocyte and cardiomyocyte numbers, as well as increases reproducibility from batch-to-batch for all tissues.
Functionally distinct POMC-expressing neuron subpopulations in hypothalamus revealed by intersectional targeting
Authors: Biglari Nasim , Gaziano Isabella , Schumacher Jonas , Radermacher Jan , Paeger Lars , Klemm Paul , Chen Weiyi , Corneliussen Svenja , Wunderlich Claudia M. , Sue Michael , Vollmar Stefan , Klöckener Tim , Sotelo-Hitschfeld Tamara , Abbasloo Amin , Edenhofer Frank , Reimann Frank , Gribble Fiona M. , Fenselau Henning , Kloppenburg Peter , Wunderlich Frank T. , Brüning Jens C. 
Published: May 2021

AbstractPro-opiomelanocortin (POMC)-expressing neurons in the arcuate nucleus of the hypothalamus represent key regulators of metabolic homeostasis. Electrophysiological and single-cell sequencing experiments have revealed a remarkable degree of heterogeneity of these neurons. However, the exact molecular basis and functional consequences of this heterogeneity have not yet been addressed. Here, we have developed new mouse models in which intersectional Cre/Dre-dependent recombination allowed for successful labeling, translational profiling and functional characterization of distinct POMC neurons expressing the leptin receptor (Lepr) and glucagon like peptide 1 receptor (Glp1r). Our experiments reveal that POMCLepr+ and POMCGlp1r+ neurons represent largely nonoverlapping subpopulations with distinct basic electrophysiological properties. They exhibit a specific anatomical distribution within the arcuate nucleus and differentially express receptors for energy-state communicating hormones and neurotransmitters. Finally, we identify a differential ability of these subpopulations to suppress feeding. Collectively, we reveal a notably distinct functional microarchitecture of critical metabolism-regulatory neurons.
A network meta-analysis on the effectiveness and safety of acupuncture in treating patients with major depressive disorder
Authors: Zhichao Hu , Ching Lam Wai , Huijuan Li , Liang Yao , Zhiyu Wang , Weiyang Huang , Zhaoxiang Bian , Linda Zhong L. D. 
Published: May 2021

AbstractAcupuncture is an important alternative therapy in treating major depressive disorder (MDD), but its efficacy and safety are still not well assessed. This study is the first network meta-analysis exploring the effectiveness and safety of acupuncture, common pharmacological treatments or other non-medication therapies for MDD. Eight databases including PubMed, Embase, Allied and Complementary Medicine Database, Cochrane Library, Wan Fang Data, China National Knowledge Infrastructure, China Biology Medicine disc, and Chongqing VIP Database were searched up to Jan 17, 2021. Articles were screened and selected by two reviewers independently. We used the Grading of Recommendations Assessment, Development and Evaluation (GRADE) approach to assess the certainty of the evidence. A total of 71 eligible studies were included. The network analysis results indicated that the combined interventions of electro-acupuncture (EA) with selective serotonin reuptake inhibitors (SSRIs) and manual acupuncture (MA) with SSRIs were more effective in improving depression symptoms compared with acupuncture alone, pharmacological interventions alone, or other inactive groups. Among all the regimens, EA with SSRIs was found to have the highest effect in improving depression symptoms of MDD. In addition, there were slight differences in the estimations of the various treatment durations. The combination of acupuncture and serotonin-norepinephrine reuptake inhibitors (SNRIs) was found to be more effective than SNRIs alone. In conclusion, acupuncture and its combinations could be safe and effective interventions for MDD patients. EA with SSRIs seems to be the most effective intervention among the assessed interventions. Well-designed and large-scale studies with long-term follow-up should be conducted in the future.
Deciphering the laws of social network-transcendent COVID-19 misinformation dynamics and implications for combating misinformation phenomena
Authors: Cheng Mingxi , Yin Chenzhong , Nazarian Shahin , Bogdan Paul 
Published: May 2021

AbstractThe global rise of COVID-19 health risk has triggered the related misinformation infodemic. We present the first analysis of COVID-19 misinformation networks and determine few of its implications. Firstly, we analyze the spread trends of COVID-19 misinformation and discover that the COVID-19 misinformation statistics are well fitted by a log-normal distribution. Secondly, we form misinformation networks by taking individual misinformation as a node and similarity between misinformation nodes as links, and we decipher the laws of COVID-19 misinformation network evolution: (1) We discover that misinformation evolves to optimize the network information transfer over time with the sacrifice of robustness. (2) We demonstrate the co-existence of fit get richer and rich get richer phenomena in misinformation networks. (3) We show that a misinformation network evolution with node deletion mechanism captures well the public attention shift on social media. Lastly, we present a network science inspired deep learning framework to accurately predict which Twitter posts are likely to become central nodes (i.e., high centrality) in a misinformation network from only one sentence without the need to know the whole network topology. With the network analysis and the central node prediction, we propose that if we correctly suppress certain central nodes in the misinformation network, the information transfer of network would be severely impacted.
Dietary source of polyunsaturated fatty acids influences cell cytotoxicity in broiler chickens
Authors: Al-Khalaifah Hanan , Al-Nasser Afaf 
Published: May 2021

AbstractThe current study aims to investigate the effects of dietary source of n-3 polyunsaturated fatty acids (PUFA) on immune response in broiler chickens, represented by cytotoxic cell activity. A total of 255 one-day-old male Cobb 500 broiler chickens were fed on fish oil (FO)-, flaxseed oil-enriched diets at 50 and 19 g/kg, respectively, in addition to the soybean-based control diet. At slaughter, samples of blood and spleen were harvested from 20 birds/treatment (n = 20). The immune tissues' fatty acid profile was analyzed by gas chromatography, and the cytotoxic cell activity was investigated. The results showed that supplementing broiler chickens with diets rich in n-3 PUFA had a substantial effect on the broiler immune tissues' fatty acid profile. Cytotoxic cell activity was significantly higher in splenocytes and peripheral blood mononuclear cells (PBMCs) from broilers fed flaxseed oil than those provided FO and the soybean control diet. These results suggest that flaxseed oil may be used to enrich chickens with n-3 PUFA and improve the immune status of chicken flocks to resist diseases.
Dosimetry with gafchromic films based on a new micro-opto-electro-mechanical system
Authors: Guardiola C. , Márquez A. , Jiménez-Ramos M. C. , López J. García , Baratto-Roldán A. , Muñoz-Berbel X. 
Published: May 2021

AbstractThis work presents the first tests performed with radiochromic films and a new Micro‒Opto‒Electro-Mechanical system (MOEMS) for in situ dosimetry evaluation in radiotherapy in real time. We present a new device and methodology that overcomes the traditional limitation of time-delay in radiochromic film analysis by turning a passive detector into an active sensor. The proposed system consists mainly of an optical sensor based on light emitting diodes and photodetectors controlled by both customized electronic circuit and graphical user interface, which enables optical measurements directly. We show the first trials performed in a low‒energy proton cyclotron with this MOEMS by using gafchromic EBT3 films. Results show the feasibility of using this system for in situ dose evaluations. Further adaptation is ongoing to develop a full real‒time active detector by integrating MOEM multi‒arrays and films in flexible printed circuits. Hence, we point to improve the clinical application of radiochromic films with the aim to optimize radiotherapy treatment verifications.
LIPG endothelial lipase and breast cancer risk by subtypes
Authors: Gago-Dominguez Manuela , Redondo Carmen M. , Calaza Manuel , Matabuena Marcos , Bermudez Maria A. , Perez-Fernandez Roman , Torres-Español María , Carracedo Ángel , Castelao J. Esteban 
Published: May 2021

AbstractExperimental data showed that endothelial lipase (LIPG) is a crucial player in breast cancer. However, very limited data exists on the role of LIPG on the risk of breast cancer in humans. We examined the LIPG-breast cancer association within our population-based case–control study from Galicia, Spain, BREOGAN (BREast Oncology GAlicia Network). Plasma LIPG and/or OxLDL were measured on 114 breast cancer cases and 82 controls from our case–control study, and were included in the present study. The risk of breast cancer increased with increasing levels of LIPG (multivariable OR for the highest category (95% CI) 2.52 (1.11–5.81), P-trend = 0.037). The LIPG-breast cancer association was restricted to Pre-menopausal breast cancer (Multivariable OR for the highest LIPG category (95% CI) 4.76 (0.94–28.77), P-trend = 0.06, and 1.79 (0.61–5.29), P-trend = 0.372, for Pre-menopausal and Post-menopausal breast cancer, respectively). The LIPG-breast cancer association was restricted to Luminal A breast cancers (Multivariable OR for the highest LIPG category (95% CI) 3.70 (1.42–10.16), P-trend = 0.015, and 2.05 (0.63–7.22), P-trend = 0.311, for Luminal A and non-Luminal A breast cancers, respectively). Subset analysis only based on HER2 receptor indicated that the LIPG-breast cancer relationship was restricted to HER2-negative breast cancers (Multivariable OR for the highest LIPG category (95% CI) 4.39 (1.70–12.03), P-trend = 0.012, and 1.10 (0.28–4.32), P-trend = 0.745, for HER2-negative and HER2-positive tumors, respectively). The LIPG-breast cancer association was restricted to women with high total cholesterol levels (Multivariable OR for the highest LIPG category (95% CI) 6.30 (2.13–20.05), P-trend = 0.018, and 0.65 (0.11–3.28), P-trend = 0.786, among women with high and low cholesterol levels, respectively). The LIPG-breast cancer association was also restricted to non-postpartum breast cancer (Multivariable OR for the highest LIPG category (95% CI) 3.83 (1.37–11.39), P-trend = 0.003, and 2.35 (0.16–63.65), P-trend = 0.396, for non-postpartum and postpartum breast cancer, respectively), although we lacked precision. The LIPG-breast cancer association was more pronounced among grades II and III than grade I breast cancers (Multivariable ORs for the highest category of LIPG (95% CI) 2.73 (1.02–7.69), P-trend = 0.057, and 1.90 (0.61–6.21), P-trend = 0.170, for grades II and III, and grade I breast cancers, respectively). No association was detected for OxLDL levels and breast cancer (Multivariable OR for the highest versus the lowest category (95% CI) 1.56 (0.56–4.32), P-trend = 0.457).
Resting state alpha oscillatory activity is a valid and reliable marker of schizotypy
Authors: Trajkovic Jelena , Di Gregorio Francesco , Ferri Francesca , Marzi Chiara , Diciotti Stefano , Romei Vincenzo 
Published: May 2021

AbstractSchizophrenia is among the most debilitating neuropsychiatric disorders. However, clear neurophysiological markers that would identify at-risk individuals represent still an unknown. The aim of this study was to investigate possible alterations in the resting alpha oscillatory activity in normal population high on schizotypy trait, a physiological condition known to be severely altered in patients with schizophrenia. Direct comparison of resting-state EEG oscillatory activity between Low and High Schizotypy Group (LSG and HSG) has revealed a clear right hemisphere alteration in alpha activity of the HSG. Specifically, HSG shows a significant slowing down of right hemisphere posterior alpha frequency and an altered distribution of its amplitude, with a tendency towards a reduction in the right hemisphere in comparison to LSG. Furthermore, altered and reduced connectivity in the right fronto-parietal network within the alpha range was found in the HSG. Crucially, a trained pattern classifier based on these indices of alpha activity was able to successfully differentiate HSG from LSG on tested participants further confirming the specific importance of right hemispheric alpha activity and intrahemispheric functional connectivity. By combining alpha activity and connectivity measures with a machine learning predictive model optimized in a nested stratified cross-validation loop, current research offers a promising clinical tool able to identify individuals at-risk of developing psychosis (i.e., high schizotypy individuals).
The paradox of retained genetic diversity of Hippocampus guttulatus in the face of demographic decline
Authors: Stacy Rupert , Palma Jorge , Correia Miguel , Wilson Anthony B. , Andrade José Pedro , Castilho Rita 
Published: May 2021

AbstractGenetic diversity is the raw foundation for evolutionary potential. When genetic diversity is significantly reduced, the risk of extinction is heightened considerably. The long-snouted seahorse (Hippocampus guttulatus) is one of two seahorse species occurring in the North-East Atlantic. The population living in the Ria Formosa (South Portugal) declined dramatically between 2001 and 2008, prompting fears of greatly reduced genetic diversity and reduced effective population size, hallmarks of a genetic bottleneck. This study tests these hypotheses using samples from eight microsatellite loci taken from 2001 and 2013, on either side of the 2008 decline. The data suggest that the population has not lost its genetic diversity, and a genetic bottleneck was not detectable. However, overall relatedness increased between 2001 to 2013, leading to questions of future inbreeding. The effective population size has seemingly increased close to the threshold necessary for the population to retain its evolutionary potential, but whether these results have been affected by sample size is not clear. Several explanations are discussed for these unexpected results, such as gene flow, local decline due to dispersal to other areas of the Ria Formosa, and the potential that the duration of the demographic decline too short to record changes in the genetic diversity. Given the results presented here and recent evidence of a second population decline, the precise estimation of both gene flow and effective population size via more extensive genetic screening will be critical to effective population management.