bluuebunny/crossref_metadata_2025_split huggingface dataset:
Variation and potential influence factors of foliar pH in land-water ecozones of three small plateau lakes
Authors: Liu Sining , An Shenqun , Yan Zhengbing , Ren Junpeng , Lu Xiaoqian , Ge Feiyang , Han Wenxuan 
Published: January 2021

AbstractAimsFoliar pH of terrestrial plants, a trait tightly associated with plant physiology and nutrient utilization, varies with plant functional types (PFTs) and environmental changes. However, it is yet unclear about the variation in foliar pH of aquatic plants, and the difference between aquatic and terrestrial plants.MethodsFoliar pH, leaf carbon, nitrogen content of plants along the lakeshore zones and the environmental conditions (water or soil pH, water status) of the corresponding vegetation of three small plateau lakes were investigated, to determine the variation and potential influence factors of foliar pH at both PFT and community levels.Important FindingsFoliar pH varied largely among aquatic plants, and across aquatic, helophytic and terrestrial plants. Floating-leaved macrophytes had more acidic foliage (pH = 4.21 ± 0.05) than emergent (5.71 ± 0.07) and submerged macrophytes (5.82 ± 0.06). Foliar pH of aquatic herbs (5.43 ± 0.10) was lower than that of helophytic (6.12 ± 0.07) and terrestrial herbs (5.74 ± 0.05). Terrestrial herbs had significantly higher foliar pH than woody plants. The variation in foliar pH across PFTs may be mainly ascribed to leaf structure, light utilization and nutrient characteristics. Consistent with the pattern on PFT level, aquatic communities had more acidic foliage than terrestrial communities, which was mainly shaped by species composition, water status and environmental pH. This study documented the first-time foliar pH of aquatic plants, and comparison of foliar pH among various plant types at a landscape scale. Our results provide bases for further exploration of the underlying mechanism and its ecological significance for wetland ecosystems.
Helminth infections in the US military: from strongyloidiasis to schistosomiasis
Authors: R Lindrose Alyssa , Mitra Indrani , Fraser Jamie , Mitre Edward , Hickey Patrick W 
Published: January 2021

Abstract

Background
Helminth infections caused by parasitic worms, including nematodes (roundworms), cestodes (tapeworms) and trematodes (flukes), can cause chronic symptoms and serious clinical outcomes if left untreated. The US military frequently conducts activities in helminth-endemic regions, particularly Africa, the Middle East and Southeast Asia. However, the military does not currently screen for these infections, and to date, no comprehensive surveillance studies have been completed to assess the frequency of helminth diagnoses in the military personnel and their families.

Methods
To determine the burden of helminth infections in the US Military Health System (MHS), we conducted a retrospective analysis of International Classification of Diseases (ICD)-9/10 diagnosis codes from all medical encounters in the MHS Data Repository (MDR) from fiscal years (FY) 2012 to 2018. Chart reviews were conducted to assign ICD diagnoses as incorrect, suspected, probable or confirmed based on the laboratory results and symptoms.

Results
Abstraction of MHS data revealed over 50 000 helminth diagnoses between FY 2012 and FY 2018. Of these, 38 445 of diagnoses were amongst unique subjects. After chart review, we found there were 34 425 validated helminth infections diagnosed amongst the unique subjects of US military personnel, retirees and dependents. Nearly 4000 of these cases represented infections other than enterobiasis. There were 351 validated strongyloidiasis diagnoses, 317 schistosomiasis diagnoses and 191 diagnoses of cysticercosis during the study period. Incidence of intestinal nematode infection diagnoses showed an upward trend, whilst the incidence of cestode infection diagnoses decreased.

Conclusions
The results of this study demonstrate that helminth infections capable of causing severe morbidity are often diagnosed in the US military. As helminth infections are often asymptomatic or go undiagnosed, the true burden of helminth infections in US military personnel and dependents may be higher than observed here. Prospective studies of US military personnel deployed to helminth-endemic areas may be indicated to determine if post-deployment screening and/or empirical treatment are warranted.
A new distance to the Brick, the dense molecular cloud G0.253+0.016
Authors: Zoccali M , Valenti E , Surot F , Gonzalez O A , Renzini A , Valenzuela Navarro A 
Published: January 2021

ABSTRACT
We analyse the near-infrared colour–magnitude diagram of a field including the giant molecular cloud G0.253+0.016 (a.k.a. The Brick) observed at high spatial resolution, with HAWK-I@VLT. The distribution of red clump stars in a line of sight crossing the cloud, compared with that in a direction just beside it, and not crossing it, allow us to measure the distance of the cloud from the Sun to be 7.20, with a statistical uncertainty of ±0.16 and a systematic error of ±0.20 kpc. This is significantly closer than what is generally assumed, i.e. that the cloud belongs to the near side of the central molecular zone, at 60 pc from the Galactic centre. This assumption was based on dynamical models of the central molecular zone, observationally constrained uniquely by the radial velocity of this and other clouds. Determining the true position of the Brick cloud is relevant because this is the densest cloud of the Galaxy not showing any ongoing star formation. This puts the cloud off by one order of magnitude from the Kennicutt–Schmidt relation between the density of the dense gas and the star formation rate. Several explanations have been proposed for this absence of star formation, most of them based on the dynamical evolution of this and other clouds, within the Galactic centre region. Our result emphasizes the need to include constraints coming from stellar observations in the interpretation of our Galaxy’s central molecular zone.
Atmospheric turbulence profiling with multi-aperture scintillation of a Shack–Hartmann sensor
Authors: Ogane Hajime , Akiyama Masayuki , Oya Shin , Ono Yoshito 
Published: January 2021

ABSTRACT
Adaptive optics (AO) systems that use tomographic estimation of the three-dimensional structure of atmospheric turbulence require the vertical atmospheric turbulence profile, which describes turbulence strength as a function of altitude as prior information. We propose a novel method to reconstruct the profile by applying a multi-aperture scintillation sensor (MASS) method to scintillation data obtained by a Shack–Hartmann wavefront sensor (SH-WFS). Compared with a traditional MASS, which uses atmospheric scintillation within four concentric annular apertures, the new method utilizes scintillation in several hundreds of spatial patterns, which are created by combinations of SH-WFS subapertures. Accuracy of the turbulence profile reconstruction is evaluated with Bayesian inference, and it is confirmed that the turbulence profile with more than 10 layers can be reconstructed because of the large number of constraints. We demonstrate the new method with a SH-WFS attached to the 51-cm telescope at Tohoku University and we confirm that the general characteristics of the atmospheric turbulence profile are reproduced.
Efficiency of thermal conduction in a magnetized circumgalactic medium
Authors: Kooij Richard , Grønnow Asger , Fraternali Filippo 
Published: January 2021

ABSTRACT
The large temperature difference between cold gas clouds around galaxies and the hot haloes that they are moving through suggests that thermal conduction could play an important role in the circumgalactic medium. However, thermal conduction in the presence of a magnetic field is highly anisotropic, being strongly suppressed in the direction perpendicular to the magnetic field lines. This is commonly modelled by using a simple prescription that assumes that thermal conduction is isotropic at a certain efficiency f &lt; 1, but its precise value is largely unconstrained. We investigate the efficiency of thermal conduction by comparing the evolution of 3D hydrodynamical (HD) simulations of cold clouds moving through a hot medium, using artificially suppressed isotropic thermal conduction (with f), against 3D magnetohydrodynamical (MHD) simulations with (true) anisotropic thermal conduction. Our main diagnostic is the time evolution of the amount of cold gas in conditions representative of the lower (close to the disc) circumgalactic medium of a Milky-Way-like galaxy. We find that in almost every HD and MHD run, the amount of cold gas increases with time, indicating that hot gas condensation is an important phenomenon that can contribute to gas accretion on to galaxies. For the most realistic orientations of the magnetic field with respect to the cloud motion we find that f is in the range 0.03–0.15. Thermal conduction is thus always highly suppressed, but its effect on the cloud evolution is generally not negligible.
ML-MOC: Machine Learning (kNN and GMM) based Membership determination for Open Clusters
Authors: Agarwal Manan , Rao Khushboo K , Vaidya Kaushar , Bhattacharya Souradeep 
Published: January 2021

ABSTRACTThe existing open-cluster membership determination algorithms are either prior dependent on some known parameters of clusters or are not automatable to large samples of clusters. In this paper, we present ml-moc, a new machine-learning-based approach to identify likely members of open clusters using the Gaia DR2 data and no a priori information about cluster parameters. We use the k-nearest neighbour (kNN) algorithm and the Gaussian mixture model (GMM) on high-precision proper motions and parallax measurements from the Gaia DR2 data to determine the membership probabilities of individual sources down to G ∼ 20 mag. To validate the developed method, we apply it to 15 open clusters: M67, NGC 2099, NGC 2141, NGC 2243, NGC 2539, NGC 6253, NGC 6405, NGC 6791, NGC 7044, NGC 7142, NGC 752, Blanco 1, Berkeley 18, IC 4651, and Hyades. These clusters differ in terms of their ages, distances, metallicities, and extinctions and cover a wide parameter space in proper motions and parallaxes with respect to the field population. The extracted members produce clean colour–magnitude diagrams and our astrometric parameters of the clusters are in good agreement with the values derived in previous work. The estimated degree of contamination in the extracted members ranges between 2 ${{\ \rm per\ cent}}$ and 12 ${{\ \rm per\ cent}}$. The results show that ml-moc is a reliable approach to segregate open-cluster members from field stars.
Complexity of the simplest species tree problem
Authors: Zhu Tianqi , Yang Ziheng 
Published: January 2021

Abstract
The multispecies coalescent model provides a natural framework for species tree estimation accounting for gene-tree conflicts. Although a number of species tree methods under the multispecies coalescent have been suggested and evaluated using simulation, their statistical properties remain poorly understood. Here, we use mathematical analysis aided by computer simulation to examine the identifiability, consistency, and efficiency of different species tree methods in the case of three species and three sequences under the molecular clock. We consider four major species-tree methods including concatenation, two-step, independent-sites maximum likelihood, and maximum likelihood. We develop approximations that predict that the probit transform of the species tree estimation error decreases linearly with the square root of the number of loci. Even in this simplest case, major differences exist among the methods. Full-likelihood methods are considerably more efficient than summary methods such as concatenation and two-step. They also provide estimates of important parameters such as species divergence times and ancestral population sizes,whereas these parameters are not identifiable by summary methods. Our results highlight the need to improve the statistical efficiency of summary methods and the computational efficiency of full likelihood methods of species tree estimation.
Chih-chen Wang: the social responsibility of scientists
Authors: Gu (顾超) Chao 
Published: January 2021

Abstract
Chih-chen Wang is a distinguished biochemist and molecular biologist, and an Academician of the Chinese Academy of Sciences (CAS). From 2008 to 2013, she was a vice chairperson of the National Committee of the Chinese People's Political Consultative Conference (CPPCC). As a young researcher, Wang participated in research on insulin. Since the 1990s, she has been focusing on the study of protein folding, and has initiated a new research area of isomerase and molecular chaperones in China.
In this interview, Chih-chen Wang elaborates on the social responsibility of scientists by drawing on both her scientific research and CPPCC experience. In Wang's view, what China really needs are intellectuals with independent thinking and strong social responsibility, who are able to provide the government valuable advice and communicate with the public to increase society's scientific literacy. She also hopes that female scientists can be more confident and gain greater attention and support from society.
Second-Window Indocyanine Green for Visualization of Hemangioblastoma: A Case Report With Two-Dimensional Operative Video
Authors: Singh Yash B , Cho Steve S , Blue Rachel , Teng Clare W , De Ravin Emma , Buch Love , Lee John Y K 
Published: January 2021

Abstract

BACKGROUND AND IMPORTANCE
The proper differentiation of neoplastic tissue from adjacent brain parenchyma can pose a great challenge, especially in eloquent areas of the brain. With the novel technique, “Second-Window Indocyanine Green,” injection of a near-infrared fluorophore (ICG) allows for intraoperative visualization of tumors by taking advantage of the compromised vasculature surrounding the tumor. Thus, such a technique may demonstrate utility for hemangioblastomas, which are hypervascular tumors of the central nervous system.

CLINICAL PRESENTATION
Here we present the case of a 39-yr-old male with a demonstrated cystic mass in the left cerebellum, with additional edema spreading towards the vermis. A total of 5 mg/kg of ICG was delivered intravenously 24 h prior to the operation. The tumor was approached via the infratentorial suboccipital approach. We observed strong near-infrared fluorescence through the intact dura, consistent with the tumor location. Surgical pathology confirmed a final diagnosis of cerebellar hemangioblastoma. There was complete resection of the tumor, with the patient discharged uneventfully.

CONCLUSION
We report the first successful case of fluorescence-guided surgery of a cerebellar hemangioblastoma using near-infrared fluorescence imaging with the Second-Window ICG technique. This joins a growing series of publications that demonstrate the efficacy of a novel application of ICG, a near-infrared fluorophore, in accurate intraoperative visualization of neoplastic tissue. While the use of a dedicated near-infrared platform (ie, the VisionSense Iridium [Visionsense, Philadelphia, Pennsylvania]) yields a higher signal-to-background ratio, a neurosurgical microscope (ie, the Leica OH6 [Leica Microsystems, Wetzlar, Germany]) may also provide a suitable option in cases where fluorescence is very strong.
External Carotid Artery-to-Middle Cerebral Artery Bypass Using a Saphenous Vein Graft With 3-Vessel Anastomosis for the Treatment of a Large, Ruptured Middle Cerebral Artery Aneurysm: 2-Dimensional Operative Video
Authors: Ravina Kristine , Bakhsheshian Joshua , Carey Joseph N , Russin Jonathan J 
Published: January 2021

Abstract
Cerebral revascularization is the treatment of choice for select complex intracranial aneurysms unamenable to traditional approaches.
1
Complex middle cerebral artery (MCA) bifurcation aneurysms can include the origins of 1 or both M2 branches and may benefit from a revascularization strategy.
2,3
A novel 3-vessel anastomosis technique combining side-to-side and end-to-side anastomoses, allowing for bihemispheric anterior cerebral artery revascularization, was recently reported.
4

This 2-dimensional operative video presents the case of a 73-yr-old woman who presented as a Hunt-Hess grade 4 subarachnoid hemorrhage due to the rupture of a large right MCA bifurcation aneurysm. The aneurysm incorporated the origins of the frontal and temporal M2 branches and was deemed unfavorable for endovascular treatment. A strategy using a high-flow bypass from the external carotid artery to the MCA with a saphenous vein (SV) graft was planned to revascularize both M2 branches simultaneously, followed by clip-trapping of the aneurysm. Intraoperatively, the back walls of both M2 segments distal to the aneurysm were connected with a standard running suture, and the SV graft was then attached to the side-to-side construct in an end-to-side fashion. Catheter angiograms on postoperative days 1 and 6 demonstrated sustained patency of the anastomosis and good filling through the bypass. The patient's clinical course was complicated by vasospasm-related right MCA territory strokes, resulting in left-sided weakness, which significantly improved upon 3-mo follow-up with no new ischemia.
The patient consented for inclusion in a prospective Institutional Review Board (IRB)-approved database from which this IRB-approved retrospective report was created.
Placement of a Pipeline Embolization Device: 2-Dimensional Operative Video
Authors: Darwal Maureen A , Binning Mandy J , Veznedaroglu Erol 
Published: January 2021

Abstract
Flow diversion has been a game-changer in the treatment of wide-neck large and giant cavernous and supraclinoid internal carotid artery (ICA) aneurysms as well as large vertebral artery aneurysms. Prior to their existence, carotid sacrifice or clipping with or without external to internal carotid artery bypass was the mainstay of treatment. Prior to flow diversion, endovascular coil embolization was often not effective as a stand-alone treatment because of the fact that many of these aneurysms present with symptoms created by mass effect on the cavernous sinus cranial nerves by the aneurysm. Packing the aneurysm with coils did nothing to alleviate the mass effect and did not prevent flow from entering the aneurysm. The continued flow causes coil compaction and aneurysm enlargement. Flow diversion addressed both these issues by diverting flow from the aneurysm while allowing the aneurysm to slowly thrombose and shrink. The video is a step-by-step account of this procedure in a 72-yr-old male with a large recurrence of a previously coiled cavernous ICA aneurysm. The procedure was performed following informed consent.
Simultaneous Robotic Single-Position Surgery With Oblique Lumbar Interbody Fusion With Software Planning: 2-Dimensional Operative Video
Authors: Pham Martin H , Plonsker Jillian , Diaz-Aguilar Luis D , Osorio Joseph A , Lehman Ronald A 
Published: January 2021

Abstract
The use of robotic guidance for spinal instrumentation is promising for its ability to offer the advantages of precision, accuracy, and reproducibility. This has become even more important in the era of lateral interbody surgery because spinal robotics opens up the possibility of a straightforward workflow for single-position surgery in the lateral position.
We present here a case of a 72-yr-old woman who presented with an L4-5 spondylolisthesis with axial back pain and radiculopathy. She subsequently underwent an L4-5 oblique lumbar interbody fusion with L4-5 bilateral posterior instrumentation in a single lateral position (Mazor X Stealth Edition, Medtronic Sofamor Danek, Medtronic Inc, Dublin, Ireland). Due to the oblique lateral approach and posterior robotic assistance, both surgeons were able to work simultaneously for increased efficiency. To our knowledge, this is the first video demonstrating a two-surgeon simultaneous robotic single-position surgery with oblique lumbar interbody fusion using a spinal robotic platform.
There is no identifying information in this video. Patient consent was obtained for the surgical procedure and for publishing of the material included in the video.
Put some muscle behind it: Understanding movement capacity of tropical birds
Authors: Robinson W Douglas , Rourke Bryan , Stratford Jeffrey A 
Published: January 2021

AbstractThe capacity for flight varies widely among bird species and influences their ecology, evolution, and conservation. Variation in vagility is influenced by behavioral responses to the nature of gaps between habitat elements as well as intrinsic characteristics of the species, particularly physiological traits influencing the physical capacity for sustained flight. Here, we briefly summarize the current state of knowledge revealing the wide variety of movement capacities of Neotropical birds. We then review current knowledge of avian muscle physiology and the role that muscle characteristics may play in influencing movement behavior. We argue that fundamental shifts in our understanding of avian muscle physiology and the influence of physiology on movement behavior remain to be elucidated, in part because knowledge from other vertebrates is being inappropriately applied to birds. In particular, critical evaluation of assumptions applied to birds from detailed studies of mammals is needed. Moving away from simple binary categorizations of avian flight muscles as “red vs. white” or “fast vs. slow” to characterize the cellular mechanisms and specific isoforms active at various life stages or seasons is also needed. An increasingly large number of avian species with a wide array of flight styles from hummingbirds to soaring raptors are appearing in GenBank, facilitating detailed physiological and evolutionary comparisons among species. Properly assessing the muscle physiological characteristics of Neotropical bird species with a wide array of movement capacities may improve our abilities to predict which species are most sensitive to landscape fragmentation and other factors that influence dispersal and migration.
Radio loudness and classification for radio sources
Authors: Zhang Lixia , Fan Junhui , Zhu Jingtian 
Published: January 2021

Abstract
The extragalactic radio sources are divided into two subclasses (radio-loud and radio-quiet sources) in the literature using radio loudness (R), which is defined as the ratio of radio emission to optical emission, but the boundary R-value separating the two classes is different in various sources. In this work, a sample of 2419 objects from the 13th catalog of quasars and active nuclei is used to build a boundary for the two subclasses. To do so, we compiled the radio and optical data, calculated their radio and optical indexes, made K-correction, obtained the radio loudness, and adopted a Bayesian analysis method to the logarithm of radio loudness for classification. We also investigated the correlations of radio loudness with radio/optical luminosities. Our main conclusions are summarized as follows: (1) The distribution of the logarithm of radio loudness (log R) is bimodal, the sources with log R &lt; 1.26 are classified as radio-quiet sources, and those with log R &gt; 1.26 are classified as radio-loud ones from the Bayesian analysis method. (2) The average radio-optical effective spectral index of radio-quiet sources is 〈αRO〉 = 0.05, while that of radio-loud sources is 〈αRO〉 = 0.55. (3) There are positive correlations between radio luminosity and radio loudness for both radio-loud sources and radio-quiet sources. (4) A dividing line of separating the distribution of the clusters on the diagram of radio loudness against radio luminosity was obtained statistically to set the boundary between radio-loud sources and radio-quiet sources, with an accuracy of $99.73\%$ based on the classification result from the Bayesian analysis method.