bluuebunny/crossref_metadata_2025_split huggingface dataset:
Downregulated lncRNA RCPCD promotes differentiation of embryonic stem cells into cardiac pacemaker-like cells by suppressing HCN4 promoter methylation
Authors: Zhu Ye , You Jia , Wei Wei , Gu Jianjun , Xu Chao , Gu Xiang 
Published: July 2021

AbstractLong non-coding RNA (lncRNA) is receiving increasing attention in embryonic stem cells (ESCs) research. However, the roles of lncRNA in the differentiation of ESCs into pacemaker-like cells are still unclear. Therefore, the present study aims to explore the roles and mechanisms of lncRNA in the differentiation of ESCs into pacemaker-like cells. ESCs were cultured and induced differentiation to pacemaker-like cells. RNA sequencing was used to identify the differential expression lncRNAs during the differentiation of ESCs into pacemaker-like cells. Cell morphology observation, flow cytometry, quantitative real-time polymerase chain reaction, western blot, and immunofluorescence were used to detect the differentiation of ESCs into pacemaker-like cells. LncRNA and genes overexpression or knockdown through transfected adenovirus in the differentiation process. The fluorescence in situ hybridization (FISH) detected the lncRNA location in the differentiated ESCs. Luciferase reporter gene assay, methylation-specific PCR, chromatin immunoprecipitation assay, and RNA immunoprecipitation assay were performed to reveal the mechanism of lncRNA-regulating HCN4 expression. Rescue experiments were used to confirm that lncRNA regulates the differentiation of ESCs into pacemaker-like cells through HCN4. We cultured the ESCs and induced the differentiation of ESCs into pacemaker-like cells successfully. The expression of lncRNA RCPCD was significantly decreased in the differentiation of ESCs into pacemaker-like cells. Overexpression of RCPCD inhibited the differentiation of ESCs into pacemaker-like cells. RCPCD inhibited the expression of HCN4 by increasing HCN4 methylation at the promoter region through DNMT1, DNMT2, and DNMT3. RCPCD inhibited the differentiation of ESCs into pacemaker-like cells by inhibiting the expression of HCN4. Our results confirm the roles and mechanism of lncRNA RCPCD in the differentiation of ESCs into pacemaker-like cells, which could pave the path for the development of a cell-based biological pacemaker.
Thermoenhanced osmotic power generator via lithium bromide and asymmetric sulfonated poly(ether ether ketone)/poly(ether sulfone) nanofluidic membrane
Authors: Sun Yue , Wu Yadong , Hu Yuhao , Zhu Congcong , Guo Hao , Kong Xiang-Yu , Luo Ercang , Jiang Lei , Wen Liping 
Published: July 2021

AbstractOsmotic energy, existing between solutions with different concentrations, is a sustainable and ecofriendly resource for solving energy issues. However, current membrane-based osmotic energy conversion technologies focus on electricity generation from an “open” system by directly mixing salt (NaCl) solutions at room temperature. For the integrated utilization of thermal energy and higher power output performance, we demonstrate thermoenhanced osmotic energy conversion by employing highly soluble lithium bromide (LiBr) solutions, asymmetric sulfonated poly(ether ether ketone)/poly(ether sulfone) (SPEEK/PES) membranes, and LiMn2O4/carbon nanotube (LMO/CNT) electrodes. The thin top layer of this heat-resistant membrane contains hydrophilic groups (i.e., the sulfonated groups in SPEEK) that are beneficial for ion-selective transport. The thermal effect on each solution is investigated, and osmotic energy conversion can be improved by regulating the heat gradient. The power density is ~16.50 W/m2 by coupling with a temperature gradient (30 °C). This work is a step forward for promoting the performance of osmotic energy conversion with thermal energy assistance and provides the basis for a closed-loop system with regenerated osmotic energy from other energy forms. Moreover, the external field-osmotic hybrid energy conversion system shows powerful potential in the energy harvesting field.
Patient-derived models recapitulate heterogeneity of molecular signatures and drug response in pediatric high-grade glioma
Authors: He Chen , Xu Ke , Zhu Xiaoyan , Dunphy Paige S. , Gudenas Brian , Lin Wenwei , Twarog Nathaniel , Hover Laura D. , Kwon Chang-Hyuk , Kasper Lawryn H. , Zhang Junyuan , Li Xiaoyu , Dalton James , Jonchere Barbara , Mercer Kimberly S. , Currier Duane G. , Caufield William , Wang Yingzhe , Xie Jia , Broniscer Alberto , Wetmore Cynthia , Upadhyaya Santhosh A. , Qaddoumi Ibrahim , Klimo Paul , Boop Frederick , Gajjar Amar , Zhang Jinghui , Orr Brent A. , Robinson Giles W. , Monje Michelle , Freeman III Burgess B. , Roussel Martine F. , Northcott Paul A. , Chen Taosheng , Rankovic Zoran , Wu Gang , Chiang Jason , Tinkle Christopher L. , Shelat Anang A. , Baker Suzanne J. 
Published: July 2021

AbstractPediatric high-grade glioma (pHGG) is a major contributor to cancer-related death in children. In vitro and in vivo disease models reflecting the intimate connection between developmental context and pathogenesis of pHGG are essential to advance understanding and identify therapeutic vulnerabilities. Here we report establishment of 21 patient-derived pHGG orthotopic xenograft (PDOX) models and eight matched cell lines from diverse groups of pHGG. These models recapitulate histopathology, DNA methylation signatures, mutations and gene expression patterns of the patient tumors from which they were derived, and include rare subgroups not well-represented by existing models. We deploy 16 new and existing cell lines for high-throughput screening (HTS). In vitro HTS results predict variable in vivo response to PI3K/mTOR and MEK pathway inhibitors. These unique new models and an online interactive data portal for exploration of associated detailed molecular characterization and HTS chemical sensitivity data provide a rich resource for pediatric brain tumor research.
Frustrated flexibility in metal-organic frameworks
Authors: Pallach Roman , Keupp Julian , Terlinden Kai , Frentzel-Beyme Louis , Kloß Marvin , Machalica Andrea , Kotschy Julia , Vasa Suresh K. , Chater Philip A. , Sternemann Christian , Wharmby Michael T. , Linser Rasmus , Schmid Rochus , Henke Sebastian 
Published: July 2021

AbstractStimuli-responsive flexible metal-organic frameworks (MOFs) remain at the forefront of porous materials research due to their enormous potential for various technological applications. Here, we introduce the concept of frustrated flexibility in MOFs, which arises from an incompatibility of intra-framework dispersion forces with the geometrical constraints of the inorganic building units. Controlled by appropriate linker functionalization with dispersion energy donating alkoxy groups, this approach results in a series of MOFs exhibiting a new type of guest- and temperature-responsive structural flexibility characterized by reversible loss and recovery of crystalline order under full retention of framework connectivity and topology. The stimuli-dependent phase change of the frustrated MOFs involves non-correlated deformations of their inorganic building unit, as probed by a combination of global and local structure techniques together with computer simulations. Frustrated flexibility may be a common phenomenon in MOF structures, which are commonly regarded as rigid, and thus may be of crucial importance for the performance of these materials in various applications.
A curved host and second guest cooperatively inhibit the dynamic motion of corannulene
Authors: Yang Yang , Ronson Tanya K. , Lu Zifei , Zheng Jieyu , Vanthuyne Nicolas , Martinez Alexandre , Nitschke Jonathan R. 
Published: July 2021

AbstractBiomolecular systems show how host–guest binding can induce changes in molecular behavior, which in turn impact the functions of the system. Here we report an artificial host–guest system where dynamic adaptation during guest binding alters both host conformation and guest dynamics. The self-assembled cage host employed here possesses concave walls and a chirotopic cavity. Complementarity between the curved surfaces of fullerenes and the inner surface of the host cavity leads the host to reconfigure stereochemically in order to bind these guests optimally. The curved molecule corannulene undergoes rapid bowl-to-bowl inversion at room temperature. Its inversion barrier is increased upon binding, however, and increased further upon formation of a ternary complex, where corannulene and a cycloalkane are both bound together. The chiral nature of the host also leads to clear differences in the NMR spectra of ternary complexes involving corannulene and one or the other enantiomer of a chiral guest, which enables the determination of enantiomeric excess by NMR.
The RNase MCPIP3 promotes skin inflammation by orchestrating myeloid cytokine response
Authors: Liu Bo , Huang Jiancheng , Ashraf Amina , Rahaman Oindrila , Lou Jing , Wang Ling , Cai Peiliang , Wen Jinping , Anwaar Shoaib , Liu Xiaoli , Ni Hai , Ganguly Dipyaman , Zhao Jijun , Yang Cliff Y. 
Published: July 2021

AbstractCCCH zinc finger proteins resolve immune responses by degrading the mRNAs of inflammatory cytokines such as tumor necrosis factor (TNF) and interleukin (IL)-6. Here we report that one such family member, monocyte chemotactic protein-induced protein 3 (MCPIP3, also named ZC3H12C or Regnase-3), promotes skin inflammation by simultaneously enhancing TNF in macrophages and repressing IL-6 in plasmacytoid dendritic cells (pDCs). MCPIP3 is positively associated with psoriasis pathogenesis, and highly expressed by macrophages and pDCs. MCPIP3-deficient macrophages produce less TNF and IL-12p40. However, MCPIP3-deficient pDCs secrete significantly more IL-6. This enhanced intradermal IL-6 may alleviate imiquimod-induced skin inflammation. As a result, MCPIP3-deficient mice are protected from imiquimod-induced psoriasiform lesions. Furthermore, early exposure to pDC-derived IL-6 suppresses macrophage-derived TNF and IL-12p40. Mechanistically, MCPIP3 could directly degrade mRNAs of IL-6, Regnase-1, and IκBζ. In turn, Regnase-1 could degrade MCPIP3 mRNAs. Our study identifies a critical post-transcriptional mechanism that synchronizes myeloid cytokine secretion to initiate autoimmune skin inflammation.
Redirected nuclear glutamate dehydrogenase supplies Tet3 with α-ketoglutarate in neurons
Authors: Traube Franziska R. , Özdemir Dilara , Sahin Hanife , Scheel Constanze , Glück Andrea F. , Geserich Anna S. , Oganesian Sabine , Kostidis Sarantos , Iwan Katharina , Rahimoff René , Giorgio Grazia , Müller Markus , Spada Fabio , Biel Martin , Cox Jürgen , Giera Martin , Michalakis Stylianos , Carell Thomas 
Published: July 2021

AbstractTet3 is the main α-ketoglutarate (αKG)-dependent dioxygenase in neurons that converts 5-methyl-dC into 5-hydroxymethyl-dC and further on to 5-formyl- and 5-carboxy-dC. Neurons possess high levels of 5-hydroxymethyl-dC that further increase during neural activity to establish transcriptional plasticity required for learning and memory functions. How αKG, which is mainly generated in mitochondria as an intermediate of the tricarboxylic acid cycle, is made available in the nucleus has remained an unresolved question in the connection between metabolism and epigenetics. We show that in neurons the mitochondrial enzyme glutamate dehydrogenase, which converts glutamate into αKG in an NAD+-dependent manner, is redirected to the nucleus by the αKG-consumer protein Tet3, suggesting on-site production of αKG. Further, glutamate dehydrogenase has a stimulatory effect on Tet3 demethylation activity in neurons, and neuronal activation increases the levels of αKG. Overall, the glutamate dehydrogenase-Tet3 interaction might have a role in epigenetic changes during neural plasticity.
Molecular insertion regulates the donor-acceptor interactions in cocrystals for the design of piezochromic luminescent materials
Authors: Zhai Chunguang , Yin Xiu , Niu Shifeng , Yao Mingguang , Hu Shuhe , Dong Jiajun , Shang Yuchen , Wang Zhigang , Li Quanjun , Sundqvist Bertil , Liu Bingbing 
Published: July 2021

AbstractDeveloping a universal strategy to design piezochromic luminescent materials with desirable properties remains challenging. Here, we report that insertion of a non-emissive molecule into a donor (perylene) and acceptor (1,2,4,5-tetracyanobezene) binary cocrystal can realize fine manipulation of intermolecular interactions between perylene and 1,2,4,5-tetracyanobezene (TCNB) for desirable piezochromic luminescent properties. A continuous pressure-induced emission enhancement up to 3 GPa and a blue shift from 655 to 619 nm have been observed in perylene-TCNB cocrystals upon THF insertion, in contrast to the red-shifted and quenched emission observed when compressing perylene-TCNB cocrystals and other cocrystals reported earlier. By combining experiment with theory, it is further revealed that the inserted non-emissive THF forms blue-shifting hydrogen bonds with neighboring TCNB molecules and promote a conformation change of perylene molecules upon compression, causing the blue-shifted and enhanced emission. This strategy remains valid when inserting other molecules as non-emissive component into perylene-TCNB cocrystals for abnormal piezochromic luminescent behaviors.
Skin-like mechanoresponsive self-healing ionic elastomer from supramolecular zwitterionic network
Authors: Zhang Wei , Wu Baohu , Sun Shengtong , Wu Peiyi 
Published: July 2021

AbstractStretchable ionic skins are intriguing in mimicking the versatile sensations of natural skins. However, for their applications in advanced electronics, good elastic recovery, self-healing, and more importantly, skin-like nonlinear mechanoresponse (strain-stiffening) are essential but can be rarely met in one material. Here we demonstrate a robust proton-conductive ionic skin design via introducing an entropy-driven supramolecular zwitterionic reorganizable network to the hydrogen-bonded polycarboxylic acid network. The design allows two dynamic networks with distinct interacting strength to sequentially debond with stretch, and the conflict among elasticity, self-healing, and strain-stiffening can be thus defeated. The representative polyacrylic acid/betaine elastomer exhibits high stretchability (1600% elongation), immense strain-stiffening (24-fold modulus enhancement), ~100% self-healing, excellent elasticity (97.9 ± 1.1% recovery ratio, <14% hysteresis), high transparency (99.7 ± 0.1%), moisture-preserving, anti-freezing (elastic at −40 °C), water reprocessibility, as well as easy-to-peel adhesion. The combined advantages make the present ionic elastomer very promising in wearable iontronic sensors for human-machine interfacing.
An ultrasensitive molybdenum-based double-heterojunction phototransistor
Authors: Feng Shun , Liu Chi , Zhu Qianbing , Su Xin , Qian Wangwang , Sun Yun , Wang Chengxu , Li Bo , Chen Maolin , Chen Long , Chen Wei , Zhang Lili , Zhen Chao , Wang Feijiu , Ren Wencai , Yin Lichang , Wang Xiaomu , Cheng Hui-Ming , Sun Dong-Ming 
Published: July 2021

AbstractTwo-dimensional (2D) materials are promising for next-generation photo detection because of their exceptional properties such as a strong interaction with light, electronic and optical properties that depend on the number of layers, and the ability to form hybrid structures. However, the intrinsic detection ability of 2D material-based photodetectors is low due to their atomic thickness. Photogating is widely used to improve the responsivity of devices, which usually generates large noise current, resulting in limited detectivity. Here, we report a molybdenum-based phototransistor with MoS2 channel and α-MoO3-x contact electrodes. The device works in a photo-induced barrier-lowering (PIBL) mechanism and its double heterojunctions between the channel and the electrodes can provide positive feedback to each other. As a result, a detectivity of 9.8 × 1016 cm Hz1/2 W−1 has been achieved. The proposed double heterojunction PIBL mechanism adds to the techniques available for the fabrication of 2D material-based phototransistors with an ultrahigh photosensitivity.
A deep learning algorithm for automated measurement of vertebral body compression from X-ray images
Authors: Seo Jae Won , Lim Sang Heon , Jeong Jin Gyo , Kim Young Jae , Kim Kwang Gi , Jeon Ji Young 
Published: July 2021

AbstractThe vertebral compression is a significant factor for determining the prognosis of osteoporotic vertebral compression fractures and is generally measured manually by specialists. The consequent misdiagnosis or delayed diagnosis can be fatal for patients. In this study, we trained and evaluated the performance of a vertebral body segmentation model and a vertebral compression measurement model based on convolutional neural networks. For vertebral body segmentation, we used a recurrent residual U-Net model, with an average sensitivity of 0.934 (± 0.086), an average specificity of 0.997 (± 0.002), an average accuracy of 0.987 (± 0.005), and an average dice similarity coefficient of 0.923 (± 0.073). We then generated 1134 data points on the images of three vertebral bodies by labeling each segment of the segmented vertebral body. These were used in the vertebral compression measurement model based on linear regression and multi-scale residual dilated blocks. The model yielded an average mean absolute error of 2.637 (± 1.872) (%), an average mean square error of 13.985 (± 24.107) (%), and an average root mean square error of 3.739 (± 2.187) (%) in fractured vertebral body data. The proposed algorithm has significant potential for aiding the diagnosis of vertebral compression fractures.
Prokineticin 1–prokineticin receptor 1 signaling in trophoblast promotes embryo implantation and placenta development
Authors: Goryszewska-Szczurek Ewelina , Baryla Monika , Kaczynski Piotr , Waclawik Agnieszka 
Published: July 2021

AbstractSuccessful pregnancy establishment in mammals depends on proper embryo-maternal communication. Prokineticin 1 (PROK1) is a secretory protein that exerts pleiotropic functions in various tissues. Despite the studies that have primarily been performed with human cell lines and mice, the function of PROK1 in trophoblasts has still not been fully elucidated. Hence, the aim of this study was to establish the role of PROK1 in trophoblasts during implantation and placentation. Prokineticin 1 mRNA was elevated in porcine trophoblasts during implantation and the early placentation period. Furthermore, we reveal that PROK1–PROKR1 signaling induces the expression of genes involved in the regulation of angiogenesis, immunological response, trophoblast cell adhesion, invasion, and proliferation, as well as stimulating phosphorylation of MAPK and PTK2. Ingenuity Pathway Analysis identified the aforementioned and also other functions associated with PROK1-regulated genes/proteins, such as cell-to-cell contact, epithelial tissue differentiation, Ca2+ release, lipid synthesis, and chemotaxis. We also showed evidence that PROK1 acting via PROKR1 increased trophoblast cell proliferation and adhesion. The PROK1-stimulated cell proliferation was mediated by PI3K/AKT/mTOR, MAPK, and cAMP, whereas adhesion was mediated by MAPK and/or PI3K/AKT signaling pathways. Concluding, our study suggests that PROK1 plays a pleiotropic role in trophoblast function during implantation and early placentation.
Association between overactive bladder and pelvic organ mobility as evaluated by dynamic magnetic resonance imaging
Authors: Kinno Kurenai , Sekido Noritoshi , Takeuchi Yasuharu , Sawada Yoshitomo , Watanabe Shoutarou , Yoshimura Yasukuni 
Published: July 2021

AbstractOveractive bladder (OAB) is a prevalent condition, which negatively impacts patients’ quality of life. Pelvic organ prolapse (POP), also prevalent in women, has been recognized as an important etiology of female OAB, although the pathophysiological mechanisms remain controversial. In this study, we reviewed findings of dynamic magnetic resonance imaging (dMRI) in 118 patients with POP and investigated the association between dMRI findings, including positions and mobilities of pelvic organs as well as parameters of pelvic organ support and bladder outlet obstruction (urethral kinking), and OAB in order to elucidate the pathophysiology of OAB in patients with POP. Our results showed that compared with non-OAB patients, OAB patients had a significantly higher body mass index, more severe pelvic floor muscle impairment, and more profound supportive defects in the uterine cervix (apical compartment). On the other hand, dMRI parameters showed hardly any significant difference between patients with mild and moderate to severe OAB. These findings may imply that levator ani impairment and defective supports of the apical compartment could be associated with the presence of OAB and that the severity of OAB could be affected by factors other than those related to pelvic organ mobility and support or urethral kinking.
Correlation between lag screw route and the ideal insertion point of the intramedullary nail
Authors: Yoshitani Junya , Kabata Tamon , Kajino Yoshitomo , Inoue Daisuke , Ohmori Takaaki , Ueoka Ken , Yamamuro Yuki , Taninaka Atsushi , Tsuchiya Hiroyuki 
Published: July 2021

AbstractUnderstanding the morphology of the superior aspect of the proximal femur is critical for treating femoral fracture. We assessed the correlation among the ideal insertion point of the femoral nail, femur head-neck axis, and native anteversion. One hundred patients with normal femurs were included in this study. Computed tomography (CT) images of the proximal femur superior aspect and amount of native anteversion were acquired. Generalised Procrustes analysis showed the morphological characteristics of the superior proximal femur according to native anteversion amount. Morphological characteristics were represented by 4 parameters; the correlation between parameters and native anteversion was investigated using CT data. The passing point of the line from the proximal femoral canal parallel to the native anteversion at the greater trochanter was located more posteriorly (mean 35.6%); the passing point of native anteversion was posterior in the femoral neck and head, although the line of the head-neck centre passed more anteriorly at the greater trochanter (mean 67.5%). This posterior translation was significantly associated with native anteversion amount. Morphometric geometric analysis showed that the lag screw could not pass head-neck centre from the nail inserted into proximal femoral canal. Anterior insertion of the nail was needed for positioning the lag screw centre.