bluuebunny/crossref_metadata_2025_split huggingface dataset:
Metal bioaccumulation alleviates the negative effects of herbivory on plant growth
Authors: Dueli Grazieli F. , DeSouza Og , Ribeiro Servio P. 
Published: September 2021

AbstractMetalliferous soils can selectively shape plant species’ physiology towards tolerance of high metal concentrations that are usually toxic to organisms. Some adapted plant species tolerate and accumulate metal in their tissues. These metals can serve as an elemental defence but can also decrease growth. Our investigation explored the capacity of natural metal accumulation in a tropical tree species, Eremanthus erythropappus (Asteraceae) and the effects of such bioaccumulation on plant responses to herbivory. Seedlings of E. erythropappus were grown in a glasshouse on soils that represented a metal concentration gradient (Al, Cu, Fe, Mn and Zn), and then the exposed plants were fed to the herbivores in a natural habitat. The effect of herbivory on plant growth was significantly mediated by foliar metal ion concentrations. The results suggest that herbivory effects on these plants change from negative to positive depending on soil metal concentration. Hence, these results provide quantitative evidence for a previously unsuspected interaction between herbivory and metal bioaccumulation on plant growth.
A machine learning approach for single cell interphase cell cycle staging
Authors: Narotamo Hemaxi , Fernandes Maria Sofia , Moreira Ana Margarida , Melo Soraia , Seruca Raquel , Silveira Margarida , Sanches João Miguel 
Published: September 2021

AbstractThe cell nucleus is a tightly regulated organelle and its architectural structure is dynamically orchestrated to maintain normal cell function. Indeed, fluctuations in nuclear size and shape are known to occur during the cell cycle and alterations in nuclear morphology are also hallmarks of many diseases including cancer. Regrettably, automated reliable tools for cell cycle staging at single cell level using in situ images are still limited. It is therefore urgent to establish accurate strategies combining bioimaging with high-content image analysis for a bona fide classification. In this study we developed a supervised machine learning method for interphase cell cycle staging of individual adherent cells using in situ fluorescence images of nuclei stained with DAPI. A Support Vector Machine (SVM) classifier operated over normalized nuclear features using more than 3500 DAPI stained nuclei. Molecular ground truth labels were obtained by automatic image processing using fluorescent ubiquitination-based cell cycle indicator (Fucci) technology. An average F1-Score of 87.7% was achieved with this framework. Furthermore, the method was validated on distinct cell types reaching recall values higher than 89%. Our method is a robust approach to identify cells in G1 or S/G2 at the individual level, with implications in research and clinical applications.
Habituation effect in social networks as a potential factor silently crushing influence maximisation efforts
Authors: Jankowski Jarosław 
Published: September 2021

AbstractInformation spreading processes are a key phenomenon observed within real and digital social networks. Network members are often under pressure from incoming information with different sources, such as informative campaigns for increasing awareness, viral marketing, rumours, fake news, or the results of other activities. Messages are often repeated, and such repetition can improve performance in the form of cumulative influence. Repeated messages may also be ignored due to a limited ability to process information. Learning processes are leading to the repeated messages being ignored, as their content has already been absorbed. In such cases, responsiveness decreases with repetition, and the habituation effect can be observed. Here, we analyse spreading processes while considering the habituation effect and performance drop along with an increased number of contacts. The ability to recover when reducing the number of messages is also considered. The results show that even low habituation and a decrease in propagation probability may substantially impact network coverage. This can lead to a significant reduction in the potential for a seed set selected with an influence maximisation method. Apart from the impact of the habituation effect on spreading processes, we show how it can be reduced with the use of the sequential seeding approach. This shows that sequential seeding is less sensitive to the habituation effect than single-stage seeding, and that it can be used to limit the negative impact on users overloaded with incoming messages.
Changes in microbial community phylogeny and metabolic activity along the water column uncouple at near sediment aphotic layers in fjords
Authors: Tobias-Hünefeldt Sven P. , Wing Stephen R. , Baltar Federico , Morales Sergio E. 
Published: September 2021

AbstractFjords are semi-enclosed marine systems with unique physical conditions that influence microbial community composition and structure. Pronounced organic matter and physical condition gradients within fjords provide a natural laboratory for the study of changes in microbial community structure and metabolic potential in response to environmental conditions. Photosynthetic production in euphotic zones sustains deeper aphotic microbial activity via organic matter sinking, augmented by large terrestrial inputs. Previous studies do not consider both prokaryotic and eukaryotic communities when linking metabolic potential and activity, community composition, and environmental gradients. To address this gap we profiled microbial functional potential (Biolog Ecoplates), bacterial abundance, heterotrophic production (3H-Leucine incorporation), and prokaryotic/eukaryotic community composition (16S and 18S rRNA amplicon gene sequencing). Similar factors shaped metabolic potential, activity and community (prokaryotic and eukaryotic) composition across surface/near surface sites. However, increased metabolic diversity at near bottom (aphotic) sites reflected an organic matter influence from sediments. Photosynthetically produced particulate organic matter shaped the upper water column community composition and metabolic potential. In contrast, microbial activity at deeper aphotic waters were strongly influenced by other organic matter input than sinking marine snow (e.g. sediment resuspension of benthic organic matter, remineralisation of terrestrially derived organic matter, etc.), severing the link between community structure and metabolic potential. Taken together, different organic matter sources shape microbial activity, but not community composition, in New Zealand fjords.
Pseudospark-sourced beam and its application in high-power millimeter-wave generation
Authors: Zhang Liang , Yin Huabi , He Wenlong , Chen Xiaodong , Zhang Jin , Cross Adrian 
Published: September 2021

AbstractA pseudospark (PS) discharge can generate an electron beam with a high current density. The electron beam can be self-focused by an ion channel and transported over a long distance without the need for an external magnetic field. Such features make it attractive to drive millimeter-wave/THz interaction circuits for the generation of high-power radiation from a compact device. This paper presents the experimental results on the generation and transportation of the PS-sourced beam with different cross-sections, as well as the differences of the PS-sourced beam with and without post acceleration. Its application in millimeter-wave/THz sources was demonstrated by the operation of extended interaction oscillators (EIOs) at different frequencies is presented.
Influence of relative density on quasi-static and fatigue failure of lattice structures in Ti6Al4V produced by laser powder bed fusion
Authors: Alaña Markel , Cutolo Antonio , Ruiz de Galarreta Sergio , Van Hooreweder Brecht 
Published: September 2021

AbstractLattice structures produced by additive manufacturing have been increasingly studied in recent years due to their potential to tailor prescribed mechanical properties. Their mechanical performances are influenced by several factors such as unit cell topology, parent material and relative density. In this study, static and dynamic behaviors of Ti6Al4V lattice structures were analyzed focusing on the criteria used to define the failure of lattices. A modified face-centered cubic (FCCm) lattice structure was designed to avoid the manufacturing problems that arise in the production of horizontal struts by laser powder bed fusion. The Gibson–Ashby curves of the FCCm lattice were obtained and it was found that relative density not only affects stiffness and strength of the structures, but also has important implications on the assumption of macroscopic yield criterion. Regarding fatigue properties, a stiffness based criterion was analyzed to improve the assessment of lattice structure failure in load bearing applications, and the influence of relative density on the stiffness evolution was studied. Apart from common normalization of S–N curves, a more accurate fatigue failure surface was developed, which is also compatible with stiffness based failure criteria. Finally, the effect of hot isostatic pressing in FCCm structures was also studied.
Improvement of microwave absorption properties of polyester coatings using NiFe2O4, X-doped g-C3N4 (X = S, P, and O), and MTiO3 (M = Fe, Mg, and Zn) nanofillers
Authors: Solgi Somayeh , Seyed Dorraji Mir Saeed , Hosseini Seyyedeh Fatemeh , Rasoulifard Mohammad Hossein , Hajimiri Ismael , Amani-Ghadim Alireza 
Published: September 2021

AbstractIn recent decades, to reduce electromagnetic pollution, scientists focus on finding new microwave absorbers with effective performance, thin thickness, and broad bandwidth. In this work, the nanoparticles of NiFe2O4, X-doped g-C3N4 (M = S, P, and O), and MTiO3 (M = Fe, Mg, and Zn) were successfully synthesized using co-precipitation, specific heat program, and semi-wet sol–gel methods, respectively. The synthesized nanoparticles were utilized as absorption agents and polyester resin as the matrix. Morphology, particle size, crystal structure, and chemical composition of the prepared nanocomposites were characterized by scanning electron microscope (SEM), transmission electron microscope (TEM), X-ray diffractometer (XRD), and energy dispersive X-Ray analysis (EDX), respectively. The microwave absorption performance of the coatings was also investigated by a vector network analyzer (VNA). Moreover, the effect of different parameters on the performance of absorbent coatings was studied by the Taguchi method and optimized to achieve an optimal absorbent. The results showed that the optimal nanocomposite has the reflectance loss (RL) less than − 30 dB (equal to absorption > 99%) at a high-frequency range (8–12 GHz) and 1 mm thickness. Furthermore, the addition of such novel nanoparticles to absorbents resulted in high values of attenuation constant (more than 200 dB/m) at the X-band. Therefore, the polyester coating filled with ZnTiO3, O-doped g-C3N4, and NiFe2O4 nanofillers can be considered a high-efficiency and low-density absorber.
The long-term association of different dietary protein sources with metabolic syndrome
Authors: Hajihashemi Parisa , Hassannejad Razieh , Haghighatdoost Fahimeh , Mohammadifard Noushin , Sadeghi Masoumeh , Roohafza Hamidreza , Sajjadi Firoozeh , Sarrafzadegan Nizal 
Published: September 2021

AbstractDue to scarce epidemiologic data linking dietary protein intakes and metabolic syndrome (MetS), we aim to determine the longitudinal association of different types of dietary protein with the incidence of MetS among Iranians adults. The study was conducted in the framework of the Isfahan Cohort Study (ICS) on 6504 adults, aged ≥ 35 years, and free of MetS at baseline. A validated food frequency questionnaire was used for assessing usual dietary intakes. MetS was defined according to the Joint Scientific Statement. Mixed-effects logistic regression was applied to examine the associations between changes in weekly frequency consumption of protein and MetS status. After a median follow-up of 11.25 years, in multivariate-adjusted model, each additional frequency consumption of total protein intake (OR 0.83; 95% CI 0.81–0.85), animal protein (OR 0.80; 95% CI 0.77–0.83), plant protein (OR 0.70; 95% CI 0.64–0.76), red meat (OR 0.74; 95% CI 0.70–0.78), poultry (OR 0.73; 95% CI 0.68–0.78), egg (OR 0.79; 95% CI 0.72–0.88) and nuts and seeds (OR 0.77; 95% CI 0.71–0.84) was associated with reduced risk of MetS. No significant association was found for processed meat (OR 0.96; 95% CI 0.87–1.01) and legumes and soy (OR 0.96; 95% CI 0.86–1.07) with MetS. Our results suggest an independent inverse association between total protein, animal and plant protein and the risk of MetS. These associations did not differ by sex. Although our results can be considered to be a strategy to reduce MetS risk by dietary guidelines, randomized clinical trials are required to confirm our findings.
Optical transient grating pumped X-ray diffraction microscopy for studying mesoscale structural dynamics
Authors: Frazer Travis D. , Zhu Yi , Cai Zhonghou , Walko Donald A. , Adamo Carolina , Schlom Darrell G. , Fullerton Eric E. , Evans Paul G. , Hruszkewycz Stephan O. , Cao Yue , Wen Haidan 
Published: September 2021

AbstractA fundamental understanding of materials’ structural dynamics, with fine spatial and temporal control, underpins future developments in electronic and quantum materials. Here, we introduce an optical transient grating pump and focused X-ray diffraction probe technique (TGXD) to examine the structural evolution of materials excited by modulated light with a precisely controlled spatial profile. This method adds spatial resolution and direct structural sensitivity to the established utility of a sinusoidal transient-grating excitation. We demonstrate TGXD using two thin-film samples: epitaxial BiFeO3, which exhibits a photoinduced strain (structural grating) with an amplitude proportional to the optical fluence, and FeRh, which undergoes a magnetostructural phase transformation. In BiFeO3, structural relaxation is location independent, and the strain persists on the order of microseconds, consistent with the optical excitation of long-lived charge carriers. The strain profile of the structural grating in FeRh, in comparison, deviates from the sinusoidal excitation and exhibits both higher-order spatial frequencies and a location-dependent relaxation. The focused X-ray probe provides spatial resolution within the engineered optical excitation profile, resolving the spatiotemporal flow of heat through FeRh locally heated above the phase transition temperature. TGXD successfully characterizes mesoscopic energy transport in functional materials without relying on a specific transport model.
The blood pressure control and arteriosclerotic cardiovascular risk among Chinese community hypertensive patients
Authors: Liu Shijun , Yuan Hanyan , Jiang Caixia , Xu Jue , Qiu Xin , Luo Jun 
Published: September 2021

AbstractThe present study aimed to describe the blood pressure (BP) control rate and 10-years arteriosclerotic cardiovascular disease (ASCVD) risk estimation among community hypertensive patients. A total of 196,803 subjects were enrolled. The control rates calculated as the intensive (SBP < 130 mmHg and DBP < 80 mmHg) and standard (SBP < 140 mmHg and DBP < 90 mmHg) threshold. Multivariable logistic analysis was employed to assess the associations between cardiovascular factors and BP control. Sensitivity, specificity and Youden’s index were used to identify the ability of high risk of ASCVD estimation by different thresholds. The control rate was 16.34% and 50.25% by the intensive and standard threshold, respectively. Besides regular medication, the risk factors for BP control included older age, male, unhealthy lifestyle, obesity, dyslipidemia and abnormal FPG. 25.08% of subjects had high risk of 10-years ASCVD estimation. The sensitivity, specificity and Youden’s index of intensive threshold was 84.37%, 16.15% and 0.51%, and were significantly different from 50.55%, 50.42% and 0.98% of the standard threshold, respectively. Half of community hypertensive patients did not control BP, and nearly a quarter have high risk of 10-years ASCVD risk estimation. The intensive threshold resulted in a one-third reduction in the control rate compared to the standard threshold. No matter which threshold was used, a single BP control status seemed not a suitable indicator for identification of high risk of 10-years ASCVD risk estimation.
Carbamoyl phosphate and its substitutes for the uracil synthesis in origins of life scenarios
Authors: Ter-Ovanessian Louis M. P. , Rigaud Baptiste , Mezzetti Alberto , Lambert Jean-François , Maurel Marie-Christine 
Published: September 2021

AbstractThe first step of pyrimidine synthesis along the orotate pathway is studied to test the hypothesis of geochemical continuity of protometabolic pathways at the origins of life. Carbamoyl phosphate (CP) is the first high-energy building block that intervenes in the in vivo synthesis of the uracil ring of UMP. Thus, the likelihood of its occurrence in prebiotic conditions is investigated herein. The evolution of carbamoyl phosphate in water and in ammonia aqueous solutions without enzymes was characterised using ATR-IR, 31P and 13C spectroscopies. Carbamoyl phosphate initially appears stable in water at ambient conditions before transforming to cyanate and carbamate/hydrogenocarbonate species within a matter of hours. Cyanate, less labile than CP, remains a potential carbamoylating agent. In the presence of ammonia, CP decomposition occurs more rapidly and generates urea. We conclude that CP is not a likely prebiotic reagent by itself. Alternatively, cyanate and urea may be more promising substitutes for CP, because they are both “energy-rich” (high free enthalpy molecules in aqueous solutions) and kinetically inert regarding hydrolysis. Energy-rich inorganic molecules such as trimetaphosphate or phosphoramidates were also explored for their suitability as sources of carbamoyl phosphate. Although these species did not generate CP or other carbamoylating agents, they exhibited energy transduction, specifically the formation of high-energy P–N bonds. Future efforts should aim to evaluate the role of carbamoylating agents in aspartate carbamoylation, which is the following reaction in the orotate pathway.
System introduction and evaluation of the first Chinese chest EIT device for ICU applications
Authors: Qu Shuo-Yao , Dai Meng , Wu Shuo , Lv Zhi-Rang , Ti Xin-Yu , Fu Feng 
Published: September 2021

AbstractChest electrical impedance tomography (EIT) is a promising application which is used to monitor the ventilation and perfusion of the lung at the bedside dynamically. The aim of the study was to introduce the first Chinese made chest EIT device for ICU application (Pulmo EIT-100). The system design of the hardware and software was briefly introduced. The performance of the system was compared to PulmoVista 500 (Dräger Medical) in healthy volunteers. The EIT system Pulmo EIT-100 consists of impedance measurement module, power supply module, PC all-in-one machine, medical cart and accessories. The performance of the system current source and voltage measurement unit was tested. A total of 50 healthy lung volunteers were prospectively examined. Subjects were asked to perform repetitive slow vital capacity (SVC) maneuvers with a spirometer. EIT measurements were performed in the following sequence during each SVC with: (1) Pulmo EIT-100, (2) PulmonVista500, (3) Pulmo EIT-100 and (4) PulmonVista500. Linearity and regional ventilation distribution of the reconstructed images from two devices were compared. The output frequency stability of the current source was 2 ppm. The amplitude error within one hour was less than 0.32‰. The output impedance of the current source was about 50kΩ. The signal-to-noise ratio of each measurement channel was ≥ 60 dB. For fixed resistance measurements, the measured values drifted about 0.08% within one hour. For human subjects, the correlations between the spirometry volume and EIT impedance from two devices were both 0.99 ± 0.01. No statistical significances were found in the parameters investigated. The repeatability (variability) of measures from the same device was comparable. Our EIT device delivers reliable data and might be used for patient measurement in a clinical setting.
The biochemical subtype is a predictor for cognitive function in glutaric aciduria type 1: a national prospective follow-up study
Authors: Märtner E. M. Charlotte , Thimm Eva , Guder Philipp , Schiergens Katharina A. , Rutsch Frank , Roloff Sylvia , Marquardt Iris , Das Anibh M. , Freisinger Peter , Grünert Sarah C. , Krämer Johannes , Baumgartner Matthias R. , Beblo Skadi , Haase Claudia , Dieckmann Andrea , Lindner Martin , Näke Andrea , Hoffmann Georg F. , Mühlhausen Chris , Walter Magdalena , Garbade Sven F. , Maier Esther M. , Kölker Stefan , Boy Nikolas 
Published: September 2021

AbstractThe aim of the study was a systematic evaluation of cognitive development in individuals with glutaric aciduria type 1 (GA1), a rare neurometabolic disorder, identified by newborn screening in Germany. This national, prospective, observational, multi-centre study includes 107 individuals with confirmed GA1 identified by newborn screening between 1999 and 2020 in Germany. Clinical status, development, and IQ were assessed using standardized tests. Impact of interventional and non-interventional parameters on cognitive outcome was evaluated. The majority of tested individuals (n = 72) showed stable IQ values with age (n = 56 with IQ test; median test age 11 years) but a significantly lower performance (median [IQR] IQ 87 [78–98]) than in general population, particularly in individuals with a biochemical high excreter phenotype (84 [75–96]) compared to the low excreter group (98 [92–105]; p = 0.0164). For all patients, IQ results were homogenous on subscale levels. Sex, clinical motor phenotype and quality of metabolic treatment had no impact on cognitive functions. Long-term neurologic outcome in GA1 involves both motor and cognitive functions. The biochemical high excreter phenotype is the major risk factor for cognitive impairment while cognitive functions do not appear to be impacted by current therapy and striatal damage. These findings implicate the necessity of new treatment concepts.