bluuebunny/crossref_metadata_2025_split huggingface dataset:
Ramp-to-threshold dynamics in a hindbrain population controls the timing of spontaneous saccades
Authors: Ramirez Alexandro D. , Aksay Emre R. F. 
Published: July 2021

AbstractOrganisms have the capacity to make decisions based solely on internal drives. However, it is unclear how neural circuits form decisions in the absence of sensory stimuli. Here we provide a comprehensive map of the activity patterns underlying the generation of saccades made in the absence of visual stimuli. We perform calcium imaging in the larval zebrafish to discover a range of responses surrounding spontaneous saccades, from cells that display tonic discharge only during fixations to neurons whose activity rises in advance of saccades by multiple seconds. When we lesion cells in these populations we find that ablation of neurons with pre-saccadic rise delays saccade initiation. We analyze spontaneous saccade initiation using a ramp-to-threshold model and are able to predict the times of upcoming saccades using pre-saccadic activity. These findings suggest that ramping of neuronal activity to a bound is a critical component of self-initiated saccadic movements.
Inflammatory monocytes promote pre-engraftment syndrome and tocilizumab can therapeutically limit pathology in patients
Authors: Jin Linlin , Sun Zimin , Liu Huilan , Zhu Xiaoyu , Zhou Yonggang , Fu Binqing , Zheng Xiaohu , Song Kaidi , Tang Baolin , Wu Yun , Zhu Jiang , Sun Rui , Tian Zhigang , Wei Haiming 
Published: July 2021

AbstractUnrelated cord blood transplantation (UCBT) is an effective treatment for hematopoietic disorders. However, this attractive approach is frequently accompanied by pre-engraftment syndrome (PES), severe cases of PES are associated with enhanced mortality and morbidity, but the pathogenesis of PES remains unclear. Here we show that GM-CSF produced by cord blood-derived inflammatory monocytes drives PES pathology, and that monocytes are the main source of IL-6 during PES. Further, we report the outcome of a single arm, single-center clinical study of tocilizumab in the treatment of steroid-refractory severe PES patients (www.chictr.org.cn ChiCTR1800015472). The study met the primary outcome measure since none of the patients was nonrelapse death during the 100 days follow-up. The study also met key secondary outcomes measures of neutrophil engraftment and hematopoiesis. These findings offer a therapeutic strategy with which to tackle PES and improve nonrelapse mortality.
Tropical cyclones cumulatively control regional carbon fluxes in Everglades mangrove wetlands (Florida, USA)
Authors: Zhao Xiaochen , Rivera-Monroy Victor H. , Farfán Luis M. , Briceño Henry , Castañeda-Moya Edward , Travieso Rafael , Gaiser Evelyn E. 
Published: July 2021

AbstractMangroves are the most blue-carbon rich coastal wetlands contributing to the reduction of atmospheric CO2 through photosynthesis (sequestration) and high soil organic carbon (C) storage. Globally, mangroves are increasingly impacted by human and natural disturbances under climate warming, including pervasive pulsing tropical cyclones. However, there is limited information assessing cyclone’s functional role in regulating wetlands carbon cycling from annual to decadal scales. Here we show how cyclones with a wide range of integrated kinetic energy (IKE) impact C fluxes in the Everglades, a neotropical region with high cyclone landing frequency. Using long-term mangrove Net Primary Productivity (Litterfall, NPPL) data (2001–2018), we estimated cyclone-induced litterfall particulate organic C (litter-POC) export from mangroves to estuarine waters. Our analysis revealed that this lateral litter-POC flux (71–205 g C m−2 year−1)—currently unaccounted in global C budgets—is similar to C burial rates (69–157 g C m−2 year−1) and dissolved inorganic carbon (DIC, 61–229 g C m−2 year−1) export. We proposed a statistical model (PULITER) between IKE-based pulse index and NPPL to determine cyclone’s impact on mangrove role as C sink or source. Including the cyclone’s functional role in regulating mangrove C fluxes is critical to developing local and regional climate change mitigation plans.
A unique volatile signature distinguishes malaria infection from other conditions that cause similar symptoms
Authors: Pulido Hannier , Stanczyk Nina M. , De Moraes Consuelo M. , Mescher Mark C. 
Published: July 2021

AbstractRecent findings suggest that changes in human odors caused by malaria infection have significant potential as diagnostic biomarkers. However, uncertainty remains regarding the specificity of such biomarkers, particularly in populations where many different pathological conditions may elicit similar symptoms. We explored the ability of volatile biomarkers to predict malaria infection status in Kenyan schoolchildren exhibiting a range of malaria-like symptoms. Using genetic algorithm models to explore data from skin volatile collections, we were able to identify malaria infection with 100% accuracy among children with fever and 75% accuracy among children with other symptoms. While we observed characteristic changes in volatile patterns driven by symptomatology, our models also identified malaria-specific biomarkers with robust predictive capability even in the presence of other pathogens that elicit similar symptoms.
Body mass index has an impact on preoperative symptoms but not clinical outcome in acute cauda equina syndrome
Authors: Butenschoen Vicki M. , Abulhala Shadi , Meyer Bernhard , Gempt Jens 
Published: July 2021

AbstractCauda equina syndrome (CES) presents a surgical emergency with treatment required within 48 h. Symptoms include reduced saddle sensation, micturition difficulties, and/or anal sphincter impairment. Controversy exists regarding the effect on and coincidence of overweight with CES. We performed a retrospective case–control study of all patients treated surgically for acute complete and incomplete CES in our neurosurgical department from 2009 to 2020, focusing on the preoperative BMI and postoperative neurological outcome. In addition, we performed a comprehensive literature review. Fifty patients with CES were included, of whom 96% suffered from a decompensated lumbar spinal stenosis or disc prolapse between the L4/5 and L5/S1 levels. Our cohort population was overweight but not obese: mean BMI was 27.5 kg/m2, compared with 27.6 kg/m2 in patients with degenerative spine surgery. BMI did not significantly influence the postoperative outcome, but it did affect preoperative symptoms and surgery duration. Symptom duration significantly differed depending on the underlying cause for CES. The literature review revealed sparse evidence, with only four clinical case series presenting contradictory results. We provide a comprehensive literature review on the current evidence regarding CES and obesity and conclude that we did not observe an association between obesity and CES occurrence. Patients with CES and other degenerative spinal pathologies belong to an overweight but not obese population. Body Mass Index has an impact on preoperative symptoms but not clinical outcome in acute CES.
Efficacy and safety of phacoemulsification plus goniosynechialysis and trabectome in patients with primary angle-closure glaucoma
Authors: Wang Yu , Liang Zhi-qiao , Zhang Yu , Hennein Lauren , Han Ying , Wu Hui-juan 
Published: July 2021

AbstractWe evaluated the efficacy and safety of combined phacoemulsification, intraocular lens implantation, goniosynechialysis (GSL), and trabectome in patients with primary angle-closure glaucoma (PACG). Twenty patients (22 eyes) of PACG treated with combined phacoemulsification, intraocular lens implantation, GSL, and trabectome between September 2017 and September 2020 were included in this case series study. The intraocular pressure (IOP), number of glaucoma medications, and best-corrected visual acuity (BCVA) were recorded at baseline, 1, 3, 6, and 12 months after surgery. Successful surgery was defined as IOP < 21 mmHg with or without IOP-lowering medications. IOP was decreased significantly from 22.07 ± 6.62 mmHg at baseline to 15.06 ± 3.39 mmHg at 12 months’ follow-up (p = 0.001). The number of glaucoma medications was significantly reduced from 2.68 ± 1.17 preoperatively to 0.78 ± 0.73 at 12 months’ follow-up (p < 0.01). The rate of successful surgery was 88.9% at 12 months. The reduction in IOP showed a positive correlation with baseline IOP (p < 0.001), and the reduction in number of glaucoma medications was positively correlated with baseline number of glaucoma medications (p < 0.001). There were no vision-threatening complications intraoperatively or postoperatively. Combined phacoemulsification, IOL implantation, GSL, and trabectome were effective and safe in PACG patients in this study. These combined surgical techniques may be useful in PACG patients, especially those with long term and extensive peripheral anterior synechiae.
Differentiation of embryonic stem cells into a putative hair cell-progenitor cells via co-culture with HEI-OC1 cells
Authors: Carpena Nathaniel T. , Chang So-Young , Abueva Celine D. G. , Jung Jae Yun , Lee Min Young 
Published: July 2021

AbstractSeveral studies have shown how different cell lines can influence the differentiation of stem cells through co-culture systems. The House Ear Institute-Organ of Corti 1 (HEI-OC1) is considered an important cell line for in vitro auditory research. However, it is unknown if HEI-OC1 cells can promote the differentiation of embryonic stem cells (ESCs). In this study, we investigated whether co-culture of ESCs with HEI-OC1 cells promotes differentiation. To this end, we developed a co-culture system of mouse ESCs with HEI-OC1 cells. Dissociated or embryonic bodies (EBs) of ESCs were introduced to a conditioned and inactivated confluent layer of HEI-OC1 cells for 14 days. The dissociated ESCs coalesced into an EB-like form that was smaller than the co-cultured EBs. Contact co-culture generated cells expressing several otic progenitor markers as well as hair cell specific markers. ESCs and EBs were also cultured in non-contact setup but using conditioned medium from HEI-OC1 cells, indicating that soluble factors alone could have a similar effect. The ESCs did not form into aggregates but were still Myo7a-positive, while the EBs degenerated. However, in the fully differentiated EBs, evidence to prove mature differentiation of inner ear hair cell was still rudimentary. Nevertheless, these results suggest that cellular interactions between ESCs and HEI-OC1 cells may both stimulate ESC differentiation.
An automatic spike sorting algorithm based on adaptive spike detection and a mixture of skew-t distributions
Authors: Toosi Ramin , Akhaee Mohammad Ali , Dehaqani Mohammad-Reza A. 
Published: July 2021

AbstractDeveloping high-density electrodes for recording large ensembles of neurons provides a unique opportunity for understanding the mechanism of the neuronal circuits. Nevertheless, the change of brain tissue around chronically implanted neural electrodes usually causes spike wave-shape distortion and raises the crucial issue of spike sorting with an unstable structure. The automatic spike sorting algorithms have been developed to extract spikes from these big extracellular data. However, due to the spike wave-shape instability, there have been a lack of robust spike detection procedures and clustering to overcome the spike loss problem. Here, we develop an automatic spike sorting algorithm based on adaptive spike detection and a mixture of skew-t distributions to address these distortions and instabilities. The adaptive detection procedure applies to the detected spikes, consists of multi-point alignment and statistical filtering for removing mistakenly detected spikes. The detected spikes are clustered based on the mixture of skew-t distributions to deal with non-symmetrical clusters and spike loss problems. The proposed algorithm improves the performance of the spike sorting in both terms of precision and recall, over a broad range of signal-to-noise ratios. Furthermore, the proposed algorithm has been validated on different datasets and demonstrates a general solution to precise spike sorting, in vitro and in vivo.
Activated carbon preparation from eucalyptus wood chips using continuous carbonization–steam activation process in a batch intermittent rotary kiln
Authors: Mopoung Sumrit , Dejang Nuchjira 
Published: July 2021

AbstractThe production of activated carbon from eucalyptus wood chips by steam activation in a 2000 kg batch intermittent rotary kiln with continuous carbonization–steam activation process conducted at 500 °C to 700 °C was studied. The activated carbon products were characterized by FTIR, SEM–EDS, Raman spectroscopy, and BET analysis. Percent yields, iodine number, and methylene blue number of the produced activated carbon materials were measured as well. It was shown that the percent yields of the activated carbon materials made in the temperature range from 500 to 700 °C are 21.63 ± 1.52%–31.79 ± 0.70% with capacities of 518–737 mg I2/g and 70.11–96.93 mg methylene blue/g. The BET surface area and micropore volume of the activated carbons are 426.8125–870.4732 m2/g and 0.102390–0.215473 cm3/g, respectively. The steam used in the process could create various oxygen containing surface functional groups such as –CO and –COC groups. In addition, it could also increase the amorphous nature of the activated carbon product. These properties of the activated carbon products are increased with increasing steam activation temperature from 500 to 700 °C. As a result, the activated carbon materials produced at activation temperatures of 600 °C and 700 °C exhibit higher adsorption.
Common cortical areas have different neural mechanisms for covert and overt visual pursuits
Authors: Morishige Ken-ichi , Hiroe Nobuo , Sato Masa-aki , Kawato Mitsuo 
Published: July 2021

AbstractAlthough humans can direct their attention to visual targets with or without eye movements, it remains unclear how different brain mechanisms control visual attention and eye movements together and/or separately. Here, we measured MEG and fMRI data during covert/overt visual pursuit tasks and estimated cortical currents using our previously developed extra-dipole, hierarchical Bayesian method. Then, we predicted the time series of target positions and velocities from the estimated cortical currents of each task using a sparse machine-learning algorithm. The predicted target positions/velocities had high temporal correlations with actual visual target kinetics. Additionally, we investigated the generalization ability of predictive models among three conditions: control, covert, and overt pursuit tasks. When training and testing data were the same tasks, the largest reconstructed accuracies were overt, followed by covert and control, in that order. When training and testing data were selected from different tasks, accuracies were in reverse order. These results are well explained by the assumption that predictive models consist of combinations of three computational brain functions: visual information-processing, maintenance of attention, and eye-movement control. Our results indicate that separate subsets of neurons in the same cortical regions control visual attention and eye movements differently.
A multicenter, hospital-based and non-inferiority study for diagnostic efficacy of automated whole breast ultrasound for breast cancer in China
Authors: Xin Yujing , Zhang Xinyuan , Yang Yi , Chen Yi , Wang Yanan , Zhou Xiang , Qiao Youlin 
Published: July 2021

AbstractThis study is the first multi-center non-inferiority study that aims to critically evaluate the effectiveness of HHUS/ABUS in China breast cancer detection. This was a multicenter hospital-based study. Five hospitals participated in this study. Women (30–69 years old) with defined criteria were invited for breast examination by HHUS, ABUS or/and mammography. For BI-RADS category 3, an additional magnetic resonance imaging (MRI) test was provided to distinguish the true negative results from false negative results. For women classified as BI-RADS category 4 or 5, either core aspiration biopsy or surgical biopsy was done to confirm the diagnosis. Between February 2016 and March 2017, 2844 women signed the informed consent form, and 1947 of them involved in final analysis (680 were 30 to 39 years old, 1267 were 40 to 69 years old).For all participants, ABUS sensitivity (91.81%) compared with HHUS sensitivity (94.70%) with non-inferior Z tests, P = 0.015. In the 40–69 age group, non-inferior Z tests showed that ABUS sensitivity (93.01%) was non-inferior to MG sensitivity (86.02%) with P < 0.001 and HHUS sensitivity (95.44%) was non-inferior to MG sensitivity (86.02%) with P < 0.001. Sensitivity of ABUS and HHUS are all superior to that of MG with P < 0.001 by superior test.For all participants, ABUS specificity (92.89%) was non-inferior to HHUS specificity (89.36%) with P < 0.001. Superiority test show that specificity of ABUS was superior to that of HHUS with P < 0.001. In the 40–69 age group, ABUS specificity (92.86%) was non-inferior to MG specificity (91.68%) with P < 0.001 and HHUS specificity (89.55%) was non-inferior to MG specificity (91.68%) with P < 0.001. ABUS is not superior to MG with P = 0.114 by superior test. The sensitivity of ABUS/HHUS is superior to that of MG. The specificity of ABUS/HHUS is non-inferior to that of MG. In China, for an experienced US radiologist, both HHUS and ABUS have better diagnostic efficacy than MG in symptomatic individuals.
Epidemiological overview of multidimensional chromosomal and genome toxicity of cannabis exposure in congenital anomalies and cancer development
Authors: Reece Albert Stuart , Hulse Gary Kenneth 
Published: July 2021

AbstractCannabis and cannabinoids are implicated in multiple genotoxic, epigenotoxic and chromosomal-toxic mechanisms and interact with several morphogenic pathways, likely underpinning previous reports of links between cannabis and congenital anomalies and heritable tumours. However the effects of cannabinoid genotoxicity have not been assessed on whole populations and formal consideration of effects as a broadly acting genotoxin remain unexplored. Our study addressed these knowledge gaps in USA datasets. Cancer data from CDC, drug exposure data from National Survey of Drug Use and Health 2003–2017 and congenital anomaly data from National Birth Defects Prevention Network were used. We show that cannabis, THC cannabigerol and cannabichromene exposure fulfill causal criteria towards first Principal Components of both: (A) Down syndrome, Trisomies 18 and 13, Turner syndrome, Deletion 22q11.2, and (B) thyroid, liver, breast and pancreatic cancers and acute myeloid leukaemia, have mostly medium to large effect sizes, are robust to adjustment for ethnicity, other drugs and income in inverse probability-weighted models, show prominent non-linear effects, have 55/56 e-Values > 1.25, and are exacerbated by cannabis liberalization (P = 9.67 × 10–43, 2.66 × 10–15). The results confirm experimental studies showing that cannabinoids are an important cause of community-wide genotoxicity impacting both birth defect and cancer epidemiology at the chromosomal hundred-megabase level.
Phenotypic and genetic variation of ultraviolet–visible-infrared spectral wavelengths of bovine meat
Authors: Bittante Giovanni , Savoia Simone , Cecchinato Alessio , Pegolo Sara , Albera Andrea 
Published: July 2021

AbstractSpectroscopic predictions can be used for the genetic improvement of meat quality traits in cattle. No information is however available on the genetics of meat absorbance spectra. This research investigated the phenotypic variation and the heritability of meat absorbance spectra at individual wavelengths in the ultraviolet–visible and near-infrared region (UV–Vis-NIR) obtained with portable spectrometers. Five spectra per instrument were taken on the ribeye surface of 1185 Piemontese young bulls from 93 farms (13,182 Herd-Book pedigree relatives). Linear animal model analyses of 1481 single-wavelengths from UV–Vis-NIRS and 125 from Micro-NIRS were carried out separately. In the overlapping regions, the proportions of phenotypic variance explained by batch/date of slaughter (14 ± 6% and 17 ± 7%,), rearing farm (6 ± 2% and 5 ± 3%), and the residual variances (72 ± 10% and 72 ± 5%) were similar for the UV–Vis-NIRS and Micro-NIRS, but additive genetics (7 ± 2% and 4 ± 2%) and heritability (8.3 ± 2.3% vs 5.1 ± 0.6%) were greater with the Micro-NIRS. Heritability was much greater for the visible fraction (25.2 ± 11.4%), especially the violet, blue and green colors, than for the NIR fraction (5.0 ± 8.0%). These results allow a better understanding of the possibility of using the absorbance of visible and infrared wavelengths correlated with meat quality traits for the genetic improvement in beef cattle.
Innovative finding of 266-nm laser regulating CD90 levels in SDSCs
Authors: Hsiao Ray-Ling , Chen Yen-Chung , Huang Mei-Yue , Chen Chiang-Yun , Lin Yu-Wei , Wu Chung-Yi 
Published: July 2021

AbstractWe used light to irradiate skin-derived stem cells and tried to find any cellular protein alterations 24 h after illumination. A 266-nm laser with four intensities was used, and of the nine cell markers that were surveyed in our trials, only CD90 was downregulated at an intensity of 20 μJ for 10 s. Repeated illuminations from the 266-nm laser at seven intensities revealed that CD90 expression was downregulated 14.6–28.8%, depending on light intensity. The maximal effect was noted at an intensity of 30 μJ for 2 s. This innovative finding reveals that a 266-nm laser can regulate protein expression in skin-derivative stem cells.
First-principles calculations to investigate the effects of strain, electric field, and atom impurity on the electronic and magnetic properties of RuX2 (X = S, Se) nanosheets
Authors: Abdullahi Yusuf Zuntu , Ahmad Sohail 
Published: July 2021

An experimental group (Angew. Chem., Int. Ed., 2021, 60, 7013–7017) has recently demonstrated the synthesis of two-dimensional (2D) RuSe2. The bang-gap increases when bi-axial strain increases from −5% to −1% (−5% to 1%) for and then decreases beyond these strain points.
Study on the application of ultrasonic wave in the removal of microbiofouling on PMMA surface
Authors: Zheng Liang , Zeng Yufan , Li Yuefan , Zheng Jing 
Published: July 2021

AbstractUltrasound has been used for antifouling on the surface of medical devices or food utensils, but it is rarely applied in marine anti‐biofouling on underwater instruments. To understand whether ultrasonic antifouling is suitable for underwater optical windows, the effect of ultrasonic conditions including frequency, power and duration on the removal of microbiofouling on the surface of polymethyl methacrylate (PMMA), a type of common optical material, was investigated in this study by three‐factor and three‐level orthogonal experiments. Before and after the ultrasonic treatment, both surface morphology and fouling degree of PMMA samples immersed in Escherichia coli suspension and seawater were characterized and quantified using laser scanning microscope. The results showed that ultrasonic treatment can effectively remove microfouling from the PMMA surface under suitable conditions. Ultrasonic technology has a great potential for the control of microfouling on the marine optical instruments. When compared with power and duration, ultrasonic frequency has a more significant effect on antifouling efficacy of ultrasound. It is useful for PMMA samples exposed to seawater within 2 days to conduct an antifouling treatment under the condition of an ultrasonic frequency of 20 kHz, ultrasonic power of 40 W, and ultrasonic duration of 7 min.