bluuebunny/crossref_metadata_2025_split huggingface dataset:
Acute myeloid leukemia maturation lineage influences residual disease and relapse following differentiation therapy
Authors: Ngo Steven , Oxley Ethan P. , Ghisi Margherita , Garwood Maximilian M. , McKenzie Mark D. , Mitchell Helen L. , Kanellakis Peter , Susanto Olivia , Hickey Michael J. , Perkins Andrew C. , Kile Benjamin T. , Dickins Ross A. 
Published: November 2021

AbstractAcute myeloid leukemia (AML) is a malignancy of immature progenitor cells. AML differentiation therapies trigger leukemia maturation and can induce remission, but relapse is prevalent and its cellular origin is unclear. Here we describe high resolution analysis of differentiation therapy response and relapse in a mouse AML model. Triggering leukemia differentiation in this model invariably produces two phenotypically distinct mature myeloid lineages in vivo. Leukemia-derived neutrophils dominate the initial wave of leukemia differentiation but clear rapidly and do not contribute to residual disease. In contrast, a therapy-induced population of mature AML-derived eosinophil-like cells persists during remission, often in extramedullary organs. Using genetic approaches we show that restricting therapy-induced leukemia maturation to the short-lived neutrophil lineage markedly reduces relapse rates and can yield cure. These results indicate that relapse can originate from therapy-resistant mature AML cells, and suggest differentiation therapy combined with targeted eradication of mature leukemia-derived lineages may improve disease outcome.
Cutting the costs of coastal protection by integrating vegetation in flood defences
Authors: van Zelst Vincent T. M. , Dijkstra Jasper T. , van Wesenbeeck Bregje K. , Eilander Dirk , Morris Edward P. , Winsemius Hessel C. , Ward Philip J. , de Vries Mindert B. 
Published: November 2021

AbstractExposure to coastal flooding is increasing due to growing population and economic activity. These developments go hand-in-hand with a loss and deterioration of ecosystems. Ironically, these ecosystems can play a buffering role in reducing flood hazard. The ability of ecosystems to contribute to reducing coastal flooding has been emphasized in multiple studies. However, the role of ecosystems in hybrid coastal protection (i.e. a combination of ecosystems and levees) has been poorly quantified at a global scale. Here, we evaluate the use of coastal vegetation, mangroves, and marshes fronting levees to reduce global coastal protection costs, by accounting for wave-vegetation interaction.The research is carried out by combining earth observation data and hydrodynamic modelling. We show that incooperating vegetation in hybrid coastal protection results in more sustainable and financially attractive coastal protection strategies. If vegetated foreshore levee systems were established along populated coastlines susceptible to flooding, the required levee crest height could be considerably reduced. This would result in a reduction of 320 (range: 107-961) billion USD2005 Power Purchasing Parity (PPP) in investments, of which 67.5 (range: 22.5- 202) billion USD2005 PPP in urban areas for a 1 in 100-year flood protection level.
Photo-fluorination of nanodiamonds catalyzing oxidative dehydrogenation reaction of ethylbenzene
Authors: Luo Zhishan , Wan Qiang , Yu Zhiyang , Lin Sen , Xie Zailai , Wang Xinchen 
Published: November 2021

AbstractStyrene is one of the most important industrial monomers and is traditionally synthesized via the dehydrogenation of ethylbenzene. Here, we report a photo-induced fluorination technique to generate an oxidative dehydrogenation catalyst through the controlled grafting of fluorine atoms on nanodiamonds. The obtained catalyst has a fabulous performance with ethylbenzene conversion reaching 70% as well as styrene yields of 63% and selectivity over 90% on a stream of 400 °C, which outperforms other equivalent benchmarks as well as the industrial K−Fe catalysts (with a styrene yield of 50% even at a much higher temperature of ca. 600 °C). Moreover, the yield of styrene remains above 50% after a 500 h test. Experimental characterizations and density functional theory calculations reveal that the fluorine functionalization not only promotes the conversion of sp3 to sp2 carbon to generate graphitic layers but also stimulates and increases the active sites (ketonic C=O). This photo-induced surface fluorination strategy facilitates innovative breakthroughs on the carbocatalysis for the oxidative dehydrogenation of other arenes.
Matched cohort study of germline BRCA mutation carriers with triple negative breast cancer in brightness
Authors: Metzger-Filho Otto , Collier Katharine , Asad Sarah , Ansell Peter J. , Watson Mark , Bae Junu , Cherian Mathew , O’Shaughnessy Joyce , Untch Michael , Rugo Hope S. , Huober Jens B. , Golshan Mehra , Sikov William M. , von Minckwitz Gunter , Rastogi Priya , Li Lang , Cheng Lijun , Maag David , Wolmark Norman , Denkert Carsten , Symmans W. Fraser , Geyer Charles E. , Loibl Sibylle , Stover Daniel G. 
Published: November 2021

AbstractIn the BrighTNess trial, carboplatin added to neoadjuvant chemotherapy (NAC) was associated with increased pathologic complete response (pCR) rates in patients with stage II/III triple-negative breast cancer (TNBC). In this matched cohort study, cases with a germline BRCA1/2 mutation (gBRCA; n = 75) were matched 1:2 with non-gBRCA controls (n = 150) by treatment arm, lymph node status, and age to evaluate pCR rates and association of benefit from platinum/PARP inhibitors with validated RNA expression-based immune, proliferation, and genomic instability scores among gBRCA with the addition of carboplatin ± veliparib to NAC. Among the well-matched cohorts, odds of pCR were not higher in gBRCA cancers who received standard NAC with carboplatin (OR 0.24, 95% CI [0.04-1.24], p = 0.09) or with carboplatin/veliparib (OR 0.44, 95% CI [0.10-1.84], p = 0.26) compared to non-gBRCA cancers. Higher PAM50 proliferation, GeparSixto immune, and CIN70 genomic instability scores were each associated with higher pCR rate in the overall cohort, but not specifically in gBRCA cases. In this study, gBRCA carriers did not have higher odds of pCR than non-gBRCA controls when carboplatin ± veliparib was added to NAC, and showed no significant differences in molecular, immune, chromosomal instability, or proliferation gene expression metrics.
A scheme for simulating multi-level phase change photonics materials
Authors: Wang Yunzheng , Ning Jing , Lu Li , Bosman Michel , Simpson Robert E. 
Published: November 2021

AbstractChalcogenide phase change materials (PCMs) have been extensively applied in data storage, and they are now being proposed for high resolution displays, holographic displays, reprogrammable photonics, and all-optical neural networks. These wide-ranging applications all exploit the radical property contrast between the PCMs’ different structural phases, extremely fast switching speed, long-term stability, and low energy consumption. Designing PCM photonic devices requires an accurate model to predict the response of the device during phase transitions. Here, we describe an approach that accurately predicts the microstructure and optical response of phase change materials during laser induced heating. The framework couples the Gillespie Cellular Automata approach for modelling phase transitions with effective medium theory and Fresnel equations. The accuracy of the approach is verified by comparing the PCM’s optical response and microstructure evolution with the results of nanosecond laser switching experiments. We anticipate that this approach to simulating the switching response of PCMs will become an important component for designing and simulating programmable photonics devices. The method is particularly important for predicting the multi-level optical response of PCMs, which is important for all-optical neural networks and PCM-programmable perceptrons.
The draining of capillary liquids from containers with interior corners aboard the ISS
Authors: McCraney Joshua , Weislogel Mark , Steen Paul 
Published: November 2021

AbstractIn this work, we analyze liquid drains from containers in effective zero-g conditions aboard the International Space Station (ISS). The efficient draining of capillary fluids from conduits, containers, and media is critical in particular to high-value liquid samples such as minuscule biofluidics processing on earth and enormous cryogenic fuels management aboard spacecraft. The amount and rate of liquid drained can be of key concern. In the absence of strong gravitational effects, system geometry, and liquid wetting dominate capillary fluidic behavior. During the years 2010–2015, NASA conducted a series of handheld experiments aboard the ISS to observe “large” length scale capillary fluidic phenomena in a variety of irregular containers with interior corners. In this work, we focus on particular single exit port draining flows from such containers and digitize hours of archived NASA video records to quantify transient interface profiles and volumetric flow rates. These data are immediately useful for theoretical and numerical model benchmarks. We demonstrate this by making comparisons to lubrication models for slender flows in simplified geometries which show variable agreement with the data, in part validating certain geometry-dependent dynamical interface curvature boundary conditions while invalidating others. We further compare the data for the draining of complex vane networks and identify the limits of the current theory. All analyzed data is made available to the public as MATLAB files, as detailed within.
Machine learning of high dimensional data on a noisy quantum processor
Authors: Peters Evan , Caldeira João , Ho Alan , Leichenauer Stefan , Mohseni Masoud , Neven Hartmut , Spentzouris Panagiotis , Strain Doug , Perdue Gabriel N. 
Published: November 2021

AbstractQuantum kernel methods show promise for accelerating data analysis by efficiently learning relationships between input data points that have been encoded into an exponentially large Hilbert space. While this technique has been used successfully in small-scale experiments on synthetic datasets, the practical challenges of scaling to large circuits on noisy hardware have not been thoroughly addressed. Here, we present our findings from experimentally implementing a quantum kernel classifier on real high-dimensional data taken from the domain of cosmology using Google’s universal quantum processor, Sycamore. We construct a circuit ansatz that preserves kernel magnitudes that typically otherwise vanish due to an exponentially growing Hilbert space, and implement error mitigation specific to the task of computing quantum kernels on near-term hardware. Our experiment utilizes 17 qubits to classify uncompressed 67 dimensional data resulting in classification accuracy on a test set that is comparable to noiseless simulation.
Evidence for strong electron correlations in a nonsymmorphic Dirac semimetal
Authors: Hsu Yu-Te , Prishchenko Danil , Berben Maarten , Čulo Matija , Wiedmann Steffen , Hunter Emily C. , Tinnemans Paul , Takayama Tomohiro , Mazurenko Vladimir , Hussey Nigel E. , Perry Robin S. 
Published: November 2021

AbstractMetallic iridium oxides (iridates) provide a fertile playground to explore new phenomena resulting from the interplay between topological protection, spin-orbit and electron-electron interactions. To date, however, few studies of the low energy electronic excitations exist due to the difficulty in synthesising crystals with sufficiently large carrier mean-free-paths. Here, we report the observation of Shubnikov-de Haas quantum oscillations in high-quality single crystals of monoclinic SrIrO3 in magnetic fields up to 35 T. Analysis of the oscillations reveals a Fermi surface comprising multiple small pockets with effective masses up to 4.5 times larger than the calculated band mass. Ab-initio calculations reveal robust linear band-crossings at the Brillouin zone boundary, due to its non-symmorphic symmetry, and overall we find good agreement between the angular dependence of the oscillations and the theoretical expectations. Further evidence of strong electron correlations is realized through the observation of signatures of non-Fermi liquid transport as well as a large Kadowaki-Woods ratio. These collective findings, coupled with knowledge of the evolution of the electronic state across the Ruddlesden-Popper iridate series, establishes monoclinic SrIrO3 as a topological semimetal on the boundary of the Mott metal-insulator transition.
Economic, environmental and grid-resilience benefits of converting diesel trains to battery-electric
Authors: Popovich Natalie D. , Rajagopal Deepak , Tasar Elif , Phadke Amol 
Published: November 2021

AbstractNearly all US locomotives are propelled by diesel-electric drives, which emit 35 million tonnes of CO2 and produce air pollution causing about 1,000 premature deaths annually, accounting for approximately US$6.5 billion in annual health damage costs. Improved battery technology plus access to cheap renewable electricity open the possibility of battery-electric rail. Here we show that a 241-km range can be achieved using a single standard boxcar equipped with a 14-MWh battery and inverter, while consuming half the energy consumed by diesel trains. At near-future battery prices, battery-electric trains can achieve parity with diesel-electric trains if environmental costs are included or if rail companies can access wholesale electricity prices and achieve 40% use of fast-charging infrastructure. Accounting for reduced criteria air pollutants and CO2 emissions, switching to battery-electric propulsion would save the US freight rail sector US$94 billion over 20 years.
Analyzing the delays of target lane vehicles caused by vehicle lane-changing operation
Authors: Yang Quantao , Lu Feng , Ma Jun , Niu Xuejun , Wang Jingsheng 
Published: November 2021

AbstractVehicle lane-changing on urban roads is the most common traffic behavior, in which the driver changes the direction or increases the speed of the vehicle by changing its trajectory. However, in high-density traffic flow, when a vehicle changes lanes, a series of vehicles following the target vehicle in the target lane will be delayed. In this study, DJI Phantom 4 drones were used to vertically record the traffic on a road section. Tracker software was then used to extract vehicle information from the video taken by the drones, including the vehicle operating speeds, etc. SPSS 22 and Origin analysis software were then employed to analyze the correlations between different vehicle operating parameters. It was found that the operating speed of the first vehicle following the target vehicle in the target lane is related to the speeds and positions of both the target vehicle and the vehicle preceding it. Under the condition of high-density traffic flow, when the target vehicle is inserted into the target lane, the speed of the vehicles following the target vehicle in the target lane will change. To model this process, the corresponding Sine and DoseResp models were constructed. By calculating the delays of vehicles following the target vehicle in the target lane, it was concluded that the overall delay of the fleet is 3.9–9.5 s.
Decreased resting and nursing in short-finned pilot whales when exposed to louder petrol engine noise of a hybrid whale-watch vessel
Authors: Arranz P. , Glarou M. , Sprogis K. R. 
Published: November 2021

AbstractVessel noise is a primary driver of behavioural disturbance in cetaceans, which are targeted during whale-watch activities. Despite the growing, global effort for implementing best-practice principles, to date, there are no regulations on whale-watch vessel noise levels. Here, we test the hypothesis that a whale-watch vessel with a low noise emission will not elicit short-term behavioural responses in toothed whales compared to a vessel with a louder engine. We measured behavioural responses (n = 36) of short-finned pilot whales (Globicephala macrorhynchus) to whale-watch vessel approaches (range 60 m, speed 1.5 kn). Treatment approaches with a quieter electric engine (136–140 dB) compared to the same vessel with a louder petrol engine (151–139 dB) (low-frequency–mid-frequency weighted source levels, re 1 µPa RMS @ 1 m) were examined. Focal whales were resting mother and calves in small group sizes. During petrol engine treatments, the mother’s mean resting time decreased by 29% compared to the control (GLM, p = 0.009). The mean proportion of time nursing for the calf was significantly influenced by petrol engine vessel passes, with a 81% decrease compared to the control (GLM, p = 0.01). There were no significant effects on behaviour from the quieter electric engine. Thus, to minimise disturbance on the activity budget of pilot whales, whale-watch vessels would ideally have source levels as low as possible, below 150 dB re 1 µPa RMS @ 1 m and perceived above ambient noise.
The ‘excess gas’ method for laboratory formation of methane hydrate-bearing sand: geotechnical application
Authors: Rake Lior , Pinkert Shmulik 
Published: November 2021

AbstractOver recent years, there has been a growing interest in producing methane gas from hydrate-bearing sands (MHBS) located below the permafrost in arctic regions and offshore within continental margins. Geotechnical stability of production wellbores is one of the significant challenges during the gas extraction process. The vast majority of geotechnical investigations of MHBS have been conducted on laboratory-formed samples due to the complex procedure of undisturbed sample extraction. One of the most commonly used hydrate laboratory-formation methods is the excess-gas method. This work investigates fundamental aspects in the excess-gas formation of MHBS that are affecting the geotechnical interpretation and modeling. The work finds that (1) the measured temperature in the experimental system may be quite different from the in-sample temperature, and can reach 4 $$^\circ$$

∘

C difference during thermodynamic processes. This potential difference must be considered in investigation of hydrate formation or dissociation, (2) various calculation approaches may yield different hydrate saturation values of up to tens of percentages difference in high hydrate saturations. The calculation formulas are specified together with the fundamental difference between them, (3) the water mixture method during the sample assembling is critical for homogeneous MHBS laboratory formation, in which a maximum initial water content threshold of 9.1 to 1.3 % are obtained for a minimal fraction size of 0.01 to 0.8 mm, respectively, (4) the hydrate formation duration may influence the MHBS properties, and should be rigorously estimated according to the real-time gas consumption convergence. The outcomes of this work may contribute to the integration of data sets derived from various experiments for the study of MHBS mechanical behavior.
A structured exercise to relieve musculoskeletal pain caused by face-down posture after retinal surgery: a randomized controlled trial
Authors: Kim A-Young , Hwang Sungsoon , Kang Se Woong , Shin So Yeon , Chang Won Hyuk , Kim Sang Jin , Noh Hoon 
Published: November 2021

AbstractFace-down posture after vitrectomy physically burdens patients. Despite being of significant concern for patients, the intraoperative pain and discomfort has not been of great interest to retinal surgeons or researchers. This randomized controlled trial evaluated the effect of a 3-day novel structured exercise on reducing musculoskeletal pain from the face-down posture in 61 participants (31 in the exercise group) who underwent vitrectomy. Among the subjects, the median age was 62 years, 42 were female, 42 had macular holes, and 19 had retinal detachments. Participants in the exercise group received initial education on the exercise and performed three daily active exercise sessions. After the sessions, the exercise group had median numeric pain scores of 2, 1, and 1 at the back neck, shoulder, and lower back, respectively, while the control group had corresponding scores of 5, 3, and 4, respectively. The exercise group reported significantly lower pain scores (P = .003, .039, and .006 for the back neck, shoulder, and lower back, respectively). Application of the structured exercise would alleviate the patients’ position-induced postoperative physical burden, by reducing pain and discomfort.
Numerical and experimental analysis of a hybrid material acoustophoretic device for manipulation of microparticles
Authors: Barani Alireza , Mosaddegh Peiman , Haghjooy Javanmard Shaghayegh , Sepehrirahnama Shahrokh , Sanati-Nezhad Amir 
Published: November 2021

AbstractAcoustophoretic microfluidic devices have been developed for accurate, label-free, contactless, and non-invasive manipulation of bioparticles in different biofluids. However, their widespread application is limited due to the need for the use of high quality microchannels made of materials with high specific acoustic impedances relative to the fluid (e.g., silicon or glass with small damping coefficient), manufactured by complex and expensive microfabrication processes. Soft polymers with a lower fabrication cost have been introduced to address the challenges of silicon- or glass-based acoustophoretic microfluidic systems. However, due to their small acoustic impedance, their efficacy for particle manipulation is shown to be limited. Here, we developed a new acoustophoretic microfluid system fabricated by a hybrid sound-hard (aluminum) and sound-soft (polydimethylsiloxane polymer) material. The performance of this hybrid device for manipulation of bead particles and cells was compared to the acoustophoretic devices made of acoustically hard materials. The results show that particles and cells in the hybrid material microchannel travel to a nodal plane with a much smaller energy density than conventional acoustic-hard devices but greater than polymeric microfluidic chips. Against conventional acoustic-hard chips, the nodal line in the hybrid microchannel could be easily tuned to be placed in an off-center position by changing the frequency, effective for particle separation from a host fluid in parallel flow stream models. It is also shown that the hybrid acoustophoretic device deals with smaller temperature rise which is safer for the actuation of bioparticles. This new device eliminates the limitations of each sound-soft and sound-hard materials in terms of cost, adjusting the position of nodal plane, temperature rise, fragility, production cost and disposability, making it desirable for developing the next generation of economically viable acoustophoretic products for ultrasound particle manipulation in bioengineering applications.