bluuebunny/crossref_metadata_2025_split huggingface dataset:
Interrelationship of myo-inositol pathways with systemic metabolic conditions in two strains of high-performance laying hens during their productive life span
Authors: Gonzalez-Uarquin Fernando , Sommerfeld Vera , Rodehutscord Markus , Huber Korinna 
Published: February 2021

AbstractAdaptation to metabolic challenges is an individual process in animals and human, most likely based on genetic background. To identify novel pathways of importance for individual adaptation to a metabolic challenge such as egg production in laying hens, myo-inositol (MI) metabolism and plasma metabolite profiles during the productive lifespan were examined in two genetically different strains, Lohmann Brown-Classic (LB) and LSL-Classic (LSL) hens. They were housed during the productive lifespan and sampled at 10, 16, 24, 30 and 60 weeks of age. The targeted AbsoluteIDQ p180 Kit was used for metabolite profiling in plasma whereas a MI enzymatic kit and ELISAs were used to quantify tissue MI concentrations and MI key enzymes (IMPase 1 and MIOX), respectively. As major finding, kidney MIOX was differently expressed in LB and LSL hens with higher amounts in LB. The onset of egg laying between week 16 and 24 of life span was associated with a clear change in the metabolite profiles, however LSL hens and LB hens adapt differently. Pearson’s correlation analyses over all hens at all time points indicated that higher expression of MI degrading enzyme MIOX was related to markers indicating metabolic stress.
Association of ESX1 gene variants with non-obstructive azoospermia in Chinese males
Authors: Ma Qian , Du Ye , Luo Xiaomin , Ye Jing , Gui Yaoting 
Published: February 2021

AbstractGenetic factors are one of the most important causes of non-obstructive azoospermia (NOA). ESX1 is an X-linked testis-biased expressed gene, and a potential biomarker for testicular sperm retrieval in NOA patients, yet few systematic studies have investigated its association with NOA. Here, we performed selected exonic sequencing in a large cohort of Chinese males, and four novel missense mutations (including one compound mutation), one novel synonymous mutation of ESX1 unique to NOA patients were identified. We analyzed the effects of ESX1 mutations on cyclin A degradation and cell cycle progression by immunoprecipitation assay and flow cytometry, and found that the compound mutant p.[P365R; L366V] ESX1 compromised the stabilizing effect of ESX1 on polyubiquitinated cyclin A, thereby causing the failure of M phase arrest in cells. Further studies showed that the deleterious effect of the compound mutations on ESX1 protein function was attributed to p.P365R but not p.L366V alteration. The novel ESX1 mutation p.P365R might confer high risk for NOA in Han Chinese population, probably via affecting cell cycle control.
Primary and secondary aerenchyma oxygen transportation pathways of Syzygium kunstleri (King) Bahadur & R. C. Gaur adventitious roots in hypoxic conditions
Authors: Sou Hong-Duck , Masumori Masaya , Yamanoshita Takashi , Tange Takeshi 
Published: February 2021

AbstractSome plant species develop aerenchyma to avoid anaerobic environments. InSyzygium kunstleri(King) Bahadur & R. C. Gaur, both primary and secondary aerenchyma were observed in adventitious roots under hypoxic conditions. We clarified the function of and relationship between primary and secondary aerenchyma. To understand the function of primary and secondary aerenchyma in adventitious roots, we measured changes in primary and secondary aerenchyma partial pressure of oxygen (pO2) after injecting nitrogen (N2) into the stem 0–3 cm above the water surface using Clark-type oxygen microelectrodes. Following N2injection, a decrease in pO2was observed in the primary aerenchyma, secondary aerenchyma, and rhizosphere. Oxygen concentration in the primary aerenchyma, secondary aerenchyma, and rhizosphere also decreased after the secondary aerenchyma was removed from near the root base. The primary and secondary aerenchyma are involved in oxygen transport, and in adventitious roots, they participate in the longitudinal movement of oxygen from the root base to root tip. As cortex collapse occurs from secondary growth, the secondary aerenchyma may support or replace the primary aerenchyma as the main oxygen transport system under hypoxic conditions.
Impact of plantaris ligamentous tendon
Authors: Olewnik Łukasz , Karauda Piotr , Gonera Bartosz , Kurtys Konrad , Tubbs R. Shane , Paulsen Friedrich , Szymański Rafał , Polguj Michał 
Published: February 2021

AbstractThere are countless morphological variations among the muscles, tendons, ligaments, arteries, veins and nerves of the human body, many of which remain undescribed. Anatomical structures are also subject to evolution, many disappearing and others continually emerging. The main goal of this pilot study was to describe a previously undetected anatomical structure, the plantaris ligamentous tendon, and to determine its frequency and histology. Twenty-two lower limbs from 11 adult cadavers (11 left, and 11 right) fixed in 10% formalin were examined. The mean age of the cadavers at death was 60.1 years (range 38–85). The group comprised six women and five men from a Central European population. All anatomical dissections of the leg and foot area accorded with the pre-established protocol. Among the 22 lower limbs, the PLT was present in 16 (72.7%) and absent in six (27.3%). It originated as a strong fan-shaped ligamentous tendon from the superior part of the plantaris muscle, the posterior surface of the femur and the lateral aspect of the knee joint capsule. It inserted to the ilio-tibial band. Histologically, a tendon and ligament were observed extending parallel to each other. A new anatomical structure has been found, for which the name plantaris ligamentous tendon is proposed. It occurs around the popliteal region between the plantaris muscle, the posterior surface of the femur, and the ilio-tibial band.
Electrochemical removal of pyrite scale using green formulations
Authors: Ahmed Musa , Hussein Ibnelwaleed A. , Onawole Abdulmujeeb T. , Saad Mohammed A. , Khaled Mazen 
Published: February 2021

AbstractPyrite scale formation is a critical problem in the hydrocarbon production industry; it affects the flow of hydrocarbon within the reservoir and the surface facilities. Treatments with inorganic acids, such as HCl, results in generation toxic hydrogen sulfide, high corrosion rates, and low dissolving power. In this work, the dissolution of pyrite scale is enhanced by the introduction of electrical current to aid the chemical dissolution. The electrolytes used in this study are chemical formulations mainly composed of diethylenetriamine-pentaacetic acid–potassium (DTPAK5) with potassium carbonate; diethylenetriamine pentaacetic acid sodium-based (DTPANa5), and l-glutamic acid-N, N-diacetic acid (GLDA). DTPA and GLDA have shown some ability to dissolve iron sulfide without generating hydrogen sulfide. The effect of these chemical formulations, disc rotational rate and current density on the electro-assisted dissolution of pyrite are investigated using Galvanostatic experiments at room temperature. The total iron dissolved of pyrite using the electrochemical process is more than 400 times higher than the chemical dissolution using the same chelating agent-based formulation and under the same conditions. The dissolution rate increased by 12-folds with the increase of current density from 5 to 50 mA/cm2. Acid and neutral formulations had better dissolution capacities than basic ones. In addition, doubling the rotational rate did not yield a significant increase in electro-assisted pyrite scale dissolution. XPS analysis confirmed the electrochemical dissolution is mainly due to oxidation of Fe2+ on pyrite surface lattice to Fe3+. The results obtained in this study suggest that electro-assisted dissolution is a promising technique for scale removal.
An improved method for the precise unravelment of non-shivering brown fat thermokinetics
Authors: Oelkrug Rebecca , Mittag Jens 
Published: February 2021

AbstractSince the discovery of functional brown adipose tissue (BAT) in adult humans, research on BAT gained a new popularity to combat obesity and related comorbidities. To date, however, methods to quantify BAT thermogenesis are often either highly invasive, require advanced equipment, are time consuming or of limited sensitivity. Here we present a simple yet highly effective and minimally invasive protocol for the Precise Unravelment of Non-shivering brown fat thermoKinetics (PUNK) in mice using infrared thermography in combination with Vaseline to brush up the fur between the shoulder blades. We also use physiological and molecular readouts including indirect calorimetry, qPCR and Western Blots to test our protocol. Our study demonstrates that Vaseline before thermography vastly advances the reproducibility and quality of BAT infrared pictures or videos, as it exposes the skin above the BAT for a direct line of sight for the infrared camera and thereby circumvents the well-known problems associated with shaving and anaesthesia. We subsequently validate that this approach does not affect physiological and molecular BAT function, but instead leads to more robust and less variable results when comparing for instance norepinephrine stimulation tests or knockout animals. Taken together, the PUNK protocol for BAT thermography quickly and effectively improves scientific outcomes of this method, and can be easily added to existing paradigms. Consequently, it safes money, time and experimental animals, thereby putting the 3R’s principles of animal welfare into practice.
Post-traumatic seizures and antiepileptic therapy as predictors of the functional outcome in patients with traumatic brain injury
Authors: Pingue Valeria , Mele Chiara , Nardone Antonio 
Published: February 2021

AbstractPost-traumatic seizures (PTS) are a common and debilitating complication of traumatic brain injury (TBI) and could have a harmful impact on the progress of patient rehabilitation. To assess the effect of PTS and relative therapy on outcome in the initial phase after TBI, during the rehabilitation process when neuroplasticity is at its highest, we retrospectively examined the clinical data of 341 adult patients undergoing rehabilitation for at least 6 months post-TBI in our neurorehabilitation unit between 2008 and 2019. We correlated through logistic regression the occurrence of seizures and use of anti-seizure medication (ASM) with neurological and functional outcomes, respectively assessed with the Glasgow Coma Scale (GCS) and the Functional Independence Measure (FIM). PTS were documented in 19.4% of patients: early PTS (EPTS) in 7.0%; late PTS (LPTS) in 9.4%; both types in 3.0%. Patients who developed EPTS had an increased risk of developing LPTS (OR = 3.90, CI 95% 1.58–9.63, p = 0.003). Patients with LPTS had a significantly higher risk of worse neurological (p < 0.0001) and rehabilitation (p < 0.05) outcome. Overall, 38.7% of patients underwent therapy with ASM; prophylactic therapy was prescribed in 24.0% of patients, of whom 14.6% subsequently developed seizures. Mortality was associated with a lower FIM and GCS score on admission but not significantly with PTS. The use of ASM was associated with a worse rehabilitation outcome, independently of the onset of epilepsy during treatment. LPTS appear to exert a negative impact on rehabilitation outcome and their occurrence is not reduced by prophylactic therapy, whereas EPTS do not influence outcome. Our findings caution against the generic use of prophylactic therapy to prevent post-traumatic epilepsy in patients with TBI.
Crop performance and soil fertility improvement using organic fertilizer produced from valorization of Carica papaya fruit peel
Authors: Dahunsi S. O. , Oranusi S. , Efeovbokhan V. E. , Adesulu-Dahunsi A. T. , Ogunwole J. O. 
Published: February 2021

AbstractIn recent times, research attention is focusing on harnessing agricultural wastes for the production of value-added products. In this study, the valorization of Carica papaya (Pawpaw) fruit peels was evaluated for the production of quality organic fertilizer via anaerobic digestion (AD) while the effects of the fertilizer on maize crop were also assessed. Pawpaw peel was first pretreated by thermo-alkaline methods before AD and analyses were carried out using standard methods. The resulting digestate was rich in nutrients and was dewatered to form solid organic fertilizer rich in microbes and soil nutrients. When applied to maize plants, organic fertilizer showed a better effect on plant traits than NPK 15–15–15 fertilizer and without fertilizer application. These were more pronounced at mid to high organic fertilizer applications (30-to-60-kg nitrogen/hectare (kg N/ha)) rate. Comparison between the values obtained from the field experiments reveals that the organic fertilizer showed better performance in all parameters such as the number of leaves, leaf area, plant height, stem girth, total shoot, and root biomass, and length of the root. However, the chemical fertilizer outperformed all the organic fertilizer applied rates in the average highest size of the corn ear by 1.4%. After harvesting, nutrient elements were found to have bioaccumulated in plant organs (leaves, stem, and root) with the highest values being 29.7 mg/L for nitrogen in the leaf and this value was reported from the experiment with 50 kg N/ha. For phosphorus and potassium, the highest concentrations of 7.05 and 8.4 mg/L were recorded in the plant’ stem of the experiment with 50 kg N/ha. All the treated soils recorded an increase in values of all nutrient elements over the control with the highest values recorded in the experiment with 60 kg N/ha. In soil with 60 kg N/ha, the nitrogen, phosphorus, and potassium increased by 28, 40, and 22% respectively over the chemical fertilizer applied experiment while different levels of increases were also recorded for all other macro and microelements in all the experiments. Thus, agricultural practices by using anaerobic digestates as organic fertilizers is a sustainable method to overcome the dependence on inorganic fertilizers high rate.
A novel parameter is better than the AHI to assess nocturnal hypoxaemia and excessive daytime sleepiness in obstructive sleep apnoea
Authors: Ma Changxiu , Zhang Ying , Liu Jiuyu , Sun Gengyun 
Published: February 2021

AbstractTo evaluate whether the percentage of total sleep time spent with apnoea and hypopnoea duration time (AHT%) is better than the apnoea-hypopnoea index (AHI) for the assessment of nocturnal hypoxaemia and excessive daytime sleepiness (EDS) in patients with obstructive sleep apnoea (OSA). Patients with suspected OSA were enrolled. Polysomnography, Epworth Sleepiness Scale, self-administered surveys and anthropometric measures were performed. The efficiency of AHT% and the AHI was evaluated for nocturnal hypoxaemia and EDS. A total of 160 eligible participants were analysed. The median AHT% in normal, mild, moderate and severe OSA patients was significantly different in the four-group patients with OSA. Spearman rank correlations analysis found that the associations were stronger between AHT% with percentage of total sleep time and O2 saturation of < 90% and minimum nocturnal oxygen saturation than these parameters with the AHI. AHT% had a greater area under the curve than the AHI for predicting EDS in patients with OSA. AHT% was significantly higher in the EDS group. We present a novel parameter, AHT%, to evaluate nocturnal hypoxaemia and EDS in OSA patients. AHT% partially compensates for the shortcomings of the AHI. AHT% is better than the AHI for assessing nocturnal hypoxaemia and EDS. AHT% reflects different clinical characteristics associated with OSA from a new perspective.
Airborne dispersion of droplets during coughing: a physical model of viral transmission
Authors: Li Hongying , Leong Fong Yew , Xu George , Kang Chang Wei , Lim Keng Hui , Tan Ban Hock , Loo Chian Min 
Published: February 2021

AbstractThe Covid-19 pandemic has focused attention on airborne transmission of viruses. Using realistic air flow simulation, we model droplet dispersion from coughing and study the transmission risk related to SARS-CoV-2. Although this model defines most airborne droplets as 8–16 µm in diameter, we infer that larger droplets of 32–40 µm in diameter may potentially be more infectious due to higher viral content. Use of face masks is therefore recommended for both personal and social protection. We found social distancing effective at reducing transmission potential across all droplet sizes. However, the presence of a human body 1 m away modifies the aerodynamics so that downstream droplet dispersion is enhanced, which has implications on safe distancing in queues. At 1 m distance, we found that an average of 0.55 viral copies is inhaled for a cough at median loading, scalable up to 340 copies at peak loading. Droplet evaporation results in significant reduction in droplet counts, but airborne transmission remains possible even under low humidity conditions.
A comparative two-cohort study of pediatric patients with long term stay in ICUs
Authors: García Mancebo Julia , de la Mata Navazo Sara , López-Herce Arteta Estíbaliz , Montero Mateo Rosario , López Esteban Isabel María , Mazzuchelli Domínguez Adriana , Sánchez Doutel María , López-Herce Cid Jesús , González Cortés Rafael 
Published: February 2021

AbstractDuring the last decades, the number of patients with long stay admissions (LSA) in PICU has increased. The purpose of this study was to identify factors associated with PICU LSA, assessing healthcare resources use and changes in the profile of these patients. A retrospective, observational, single-center study was carried out. Characteristics of LSA were compared between two periods (2006–2010 and 2011–2015). During the earlier period there were 2,118 admissions (3.9% of them LSA), whereas during the second period, there were 1,763 (5.4% of them LSA) (p = 0.025). LSA accounted for 33.7% PICU stay days during the first period and 46.7% during the second (p < 0.001). Higher use of non-invasive ventilation (80.2% vs. 37.8%, p = 0.001) and high-flow oxygen therapy (68.8% vs. 37.8%, p = 0.005) was observed in the 2011–2015 cohort, whereas the use of arterial catheter (77.1% vs. 92.6%, p = 0.005), continuous infusion of adrenaline (55.2% vs. 75.9%, p = 0.004), and hemoderivative transfusion (74% vs. 89.2%, p = 0.010) was less frequent. In the 2006–2010 cohort, hospital-acquired infections were more common (95.2% vs. 68.8%, p < 0.001) and mortality was higher (26.8% vs. 13.8%, p = 0.026). The number of long-stay PICU admissions have increased entailing an intensive use of healthcare resources. These patients have a high risk for complications and mortality.
Accumulation of airborne microplastics in lichens from a landfill dumping site (Italy)
Authors: Loppi Stefano , Roblin Brett , Paoli Luca , Aherne Julian 
Published: February 2021

AbstractThe aim of this study was to assess if lichens (Flavoparmelia caperata) surrounding a landfill dumping site in Italy accumulated higher amounts of microplastics compared with lichens at more distant sites. Lichen samples were collected at three sites along a transect from the landfill: close (directly facing the landfill), intermediate (200 m), and remote (1500 m). Anthropogenic microparticles (fibres and fragments) were determined visually after wet peroxide digestion of the samples, and microplastics were identified based on a hot needle test; the type of plastic was identified by micro-Raman analysis. The results showed that lichens collected in the vicinity of the landfill accumulated the highest number of anthropogenic microfibres and fragments (147 mp/g dw), and consequently microplastics (79 mp/g dw), suggesting that the impact of landfill emissions is spatially limited. The proportion of fibres and fragments identified as microplastics was 40% across all sites and the most abundant polymer type was polyester or polyethylene terephthalate (68%). These results clearly indicated that lichens can effectively be used to monitor the deposition of microplastics.
Bacteria enhance the production of extracellular polymeric substances by the green dinoflagellate Lepidodinium chlorophorum
Authors: Roux Pauline , Siano Raffaele , Collin Karine , Bilien Gwenael , Sinquin Corinne , Marchand Laetitia , Zykwinska Agata , Delbarre-Ladrat Christine , Schapira Mathilde 
Published: February 2021

AbstractHigh biomasses of the marine dinoflagellate Lepidodinium chlorophorum cause green seawater discolorations along Southern Brittany (NE Atlantic, France). The viscosity associated to these phenomena has been related to problems in oyster cultivation. The harmful effect of L. chlorophorum might originate from the secretion of Extracellular Polymeric Substances (EPS). To understand whether the EPS are produced by L. chlorophorum or its associated bacteria, or if they are a product of their interaction, batch cultures were performed under non-axenic and pseudo-axenic conditions for three strains. Maximum dinoflagellate cell abundances were observed in pseudo-axenic cultures. The non-sinking fraction of polymers (Soluble Extracellular Polymers, SEP), mainly composed of proteins and the exopolysaccharide sulphated galactan, slightly increased in pseudo-axenic cultures. The amount of Transparent Exopolymer Particles (TEP) per cell increased under non-axenic conditions. Despite the high concentrations of Particulate Organic Carbon (POC) measured, viscosity did not vary. These results suggest that the L. chlorophorum-bacteria interaction could have a detrimental consequence on the dinoflagellate, translating in a negative effect on L. chlorophorum growth, as well as EPS overproduction by the dinoflagellate, at concentrations that should not affect seawater viscosity.
Reduced gonadotroph stimulation by ethanolamine plasmalogens in old bovine brains
Authors: Kadokawa Hiroya , Kotaniguchi Miyako , Kereilwe Onalenna , Kitamura Shinichi 
Published: February 2021

AbstractEthanolamine plasmalogens (EPls), unique alkenylacyl-glycerophospholipids, are the only known ligands of G-protein-coupled receptor 61—a novel receptor co-localised with gonadotropin-releasing hormone receptors on anterior pituitary gonadotrophs. Brain EPl decreases with age. Commercial EPl—extracted from the cattle brain (unidentified age)—can independently stimulate FSH secretion from gonadotrophs. We hypothesised that there exists an age-related difference in the quality, quantity, and ability of bovine brain EPls to stimulate bovine gonadotrophs. We compared the brains of young (about 26 month old heifers) and old (about 90 month old cows) Japanese Black bovines, including EPls obtained from both groups. Additionally, mRNA expressions of the EPl biosynthesis enzymes, glyceronephosphate O-acyltransferase, alkylglycerone phosphate synthase, and fatty acyl-CoA reductase 1 (FAR1) were evaluated in young and old hypothalami. The old-brain EPl did not stimulate FSH secretion from gonadotrophs, unlike the young-brain EPl. Molecular species of EPl were compared using two-dimensional liquid chromatography-mass spectrometry. We identified 20 EPl molecular species of which three and three exhibited lower (P < 0.05) and higher (P < 0.05) ratios, respectively, in old compared to young brains. In addition, quantitative reverse transcription-polymerase chain reaction detected higher FAR1 levels in the POA, but not in the ARC&ME tissues, of old cows than that of fertile young heifers. Therefore, old-brain EPl may be associated with age-related infertility.