bluuebunny/crossref_metadata_2025_split huggingface dataset:
Tropical Rainfall Variability Accompanying Global Normal Mode Oscillations
Authors: Sakazaki Takatoshi 
Published: February 2021

AbstractUsing global precipitation datasets (GSMaP, TRMM) and the latest reanalysis data (ERA5), we performed a comprehensive analysis of the tropical rainfall variability that accompanies global-scale, low-frequency normal modes: Rossby, Rossby–gravity, and Kelvin modes. Cross-spectral analysis and lag-regression analysis both showed that coherent rainfall variations accompany not only the wavenumber-1 gravest Rossby mode (“5-day” wave) but other low-frequency modes. The normal mode rainfall variations are enhanced in regions such as the Amazon basin, but also include circumglobally traveling structures with substantial amplitude over the open ocean. These results are remarkably consistent among the three datasets including even ERA5 rainfall data. The circumglobal rainfall signals may be considered primarily as a response to the normal mode dynamical variations. We found that the phase relationship between rainfall and dynamical field variability is strongly dependent on the type of mode and even on the zonal wavenumber. We suggest that this is explained by the difference in relative importance of two underlying processes: 1) moisture-flux convergence and 2) rainfall enhancement associated with adiabatic cooling. Our determined rainfall signals are the response to quasi-monochromatic, periodic waves that have a simple vertical structure and represent one special case of tropospheric wave–rainfall coupling. Implications for the mechanism of 12-h rainfall oscillations believed to be forced by the atmospheric tide are also considered.
Are 100 Ensemble Members Enough to Capture the Remote Atmospheric Response to +2°C Arctic Sea Ice Loss?
Authors: Peings Yannick , Labe Zachary M. , Magnusdottir Gudrun 
Published: February 2021

AbstractThis study presents results from the Polar Amplification Multimodel Intercomparison Project (PAMIP) single-year time-slice experiments that aim to isolate the atmospheric response to Arctic sea ice loss at global warming levels of +2°C. Using two general circulation models (GCMs), the ensemble size is increased up to 300 ensemble members, beyond the recommended 100 members. After partitioning the response in groups of 100 ensemble members, the reproducibility of the results is evaluated, with a focus on the response of the midlatitude jet streams in the North Atlantic and North Pacific. Both atmosphere-only and coupled ocean–atmosphere PAMIP experiments are analyzed. Substantial differences in the midlatitude response are found among the different experiment subsets, suggesting that 100-member ensembles are still significantly influenced by internal variability, which can mislead conclusions. Despite an overall stronger response, the coupled ocean–atmosphere runs exhibit greater spread due to additional ENSO-related internal variability when the ocean is interactive. The lack of consistency in the response is true for anomalies that are statistically significant according to Student’s t and false discovery rate tests. This is problematic for the multimodel assessment of the response, as some of the spread may be attributed to different model sensitivities whereas it is due to internal variability. We propose a method to overcome this consistency issue that allows for more robust conclusions when only 100 ensemble members are used.
Examining the Influence of Recording System on the Pure Temperature Error in XBT Data
Authors: Tan Zhetao , Reseghetti Franco , Abraham John , Cowley Rebecca , Chen Keyi , Zhu Jiang , Zhang Bin , Cheng Lijing 
Published: February 2021

AbstractExpendable bathythermographs (XBTs) have been widely deployed for ocean monitoring since the late 1960s. Improving the quality of XBT data is a vital task in climatology. Many factors (e.g., temperature, probe type, and manufacturing time) have been identified as major influences of XBT systematic bias. In addition, the recording system (RS) has long been suspected as another factor. However, this factor has not been taken into account in any global XBT correction schemes, partly because its impact is poorly understood. Here, based on analysis of an XBT–CTD side-by-side dataset and a global collocated reference dataset, the influence of RSs on the pure temperature error (PTE) is examined. Results show a clear time dependency of PTE on the RS, with maximum values occurring in the 1970s. In addition, the method used to convert thermistor resistance into temperature in the RS (using a resistance–temperature equation) has changed over time. These changes, together with the decadal changes in RSs, might contribute a small error (10% on average) to the RS dependency. Here, an improvement of global XBT bias correction that accounts for the RS dependency is proposed. However, more than 70% of historical global XBT data are missing RS-type information. We investigate several assumptions about the temporal distribution of RS types, and all scenarios lead to at least a ~50% reduction in the time variation of PTE compared with the uncorrected data. Therefore, the RS dependency should be taken into account in updated XBT correction schemes, which would have further implications for climatology studies.
A Sequential Non-Gaussian Approach for Precipitation Data Assimilation
Authors: Pérez Hortal Andrés A. , Zawadzki Isztar , Yau M. K. 
Published: February 2021

AbstractIn two recent studies, the authors presented a new data assimilation (DA) method for precipitation observations that does not require Gaussianity or linearity assumptions. The method, called localized ensemble mosaic assimilation (LEMA), initializes the new ensemble forecast by relaxing the background ensemble (prior) toward a single analysis composed of different column states taken from the ensemble members with the lowest error in the precipitation forecast. However, a limitation of the LEMA method is that relaxing the background ensemble toward that analysis severely reduces the spread of the ensemble, thus, limiting its usefulness for cycled DA applications. This study presents a new version of LEMA, called localized ensemble mosaic assimilation sequence (LEMAS), suitable for cycled DA operations. LEMAS constructs an ensemble of analysis mosaics using a small group of members closer to the observations instead of only the closest one. The new ensemble forecast is then initialized by recentering the prior ensemble around the mean of the analysis ensemble while scaling the original background perturbations to match the spread of the analysis mosaics. A series of ideal and real DA experiments are used to evaluate the potential of LEMAS for the assimilation of hourly accumulation observations. A comparison of LEMAS with the local ensemble transform Kalman filter (LETKF) using idealized experiments shows that LEMAS produces similar or slightly better forecast quality than the LETKF in temperature, water vapor, winds, and precipitation. Extending this comparison to real DA experiments assimilating Stage-IV precipitation observations shows that both methods produce precipitation forecasts of comparable quality.
Effects of COVID-19 on Sense of Smell: Human Factors/Ergonomics Considerations
Authors: Cameron E. Leslie , Møller Per , Karn Keith S. 
Published: February 2021

Objective We review the effects of COVID-19 on the human sense of smell (olfaction) and discuss implications for human-system interactions. We emphasize how critical smell is and how the widespread loss of smell due to COVID-19 will impact human-system interaction. Background COVID-19 reduces the sense of smell in people who contract the disease. Thus far, olfaction has received relatively little attention from human factors/ergonomics professionals. While smell is not a primary means of human-system communication, humans rely on smell in many important ways related to both quality of life and safety. Method We briefly review and synthesize the rapidly expanding literature through September 2020 on the topic of smell loss caused by COVID-19. We interpret findings in terms of their relevance to human factors/ergonomics researchers and practitioners. Results Since March 2020 dozens of articles have been published that report smell loss in COVID-19 patients. The prevalence and duration of COVID-19-related smell loss is still under investigation, but the available data suggest that it may leave many people with long-term deficits and distortions in sense of smell. Conclusion We suggest that the human factors/ergonomics community could become more aware of the importance of the sense of smell and focus on accommodating the increasing number of people with reduced olfactory performance. Application We present examples of how olfaction can augment human-system communication and how human factors/ergonomics professionals might accommodate people with olfactory dysfunction. While seemingly at odds, both of these goals can be achieved.
Effects of electromyographic biofeedback interventions for shoulder pain and function: Systematic review and meta-analysis
Authors: Kamonseki Danilo Harudy , Calixtre Letícia Bojikian , Barreto Rodrigo Py Gonçalves , Camargo Paula Rezende 
Published: February 2021

Objective: To systematically review the effectiveness of electromyographic biofeedback interventions to improve pain and function of patients with shoulder pain. Design: Systematic review of controlled clinical trials. Literature search: Databases (Medline, EMBASE, CINAHL, PEDro, CENTRAL, Web of Science, and SCOPUS) were searched in December 2020. Study selection criteria: Randomized clinical trials that investigated the effects of electromyographic biofeedback for individuals with shoulder pain. Patient-reported pain and functional outcomes were collected and synthesized. Data synthesis: The level of evidence was synthesized using GRADE and Standardized Mean Differences and 95% confidence interval were calculated using a random-effects inverse variance model for meta-analysis. Results: Five studies were included with a total sample of 272 individuals with shoulder pain. Very-low quality of evidence indicated that electromyographic biofeedback was not superior to control for reducing shoulder pain (standardized mean differences = −0.21, 95% confidence interval: −0.67 to 0.24, P = 0.36). Very-low quality of evidence indicated that electromyographic biofeedback interventions were not superior to control for improving shoulder function (standardized mean differences = −0.11, 95% confidence interval: −0.41 to 0.19, P = 0.48). Conclusion: Electromyographic biofeedback may be not effective for improving shoulder pain and function. However, the limited number of included studies and very low quality of evidence does not support a definitive recommendation about the effectiveness of electromyographic biofeedback to treat individuals with shoulder pain.
Structural Consequences of a Partial Anterior Cruciate Ligament Injury on Remaining Joint Integrity: Evidence for Ligament and Bone Changes Over Time in an Ovine Model
Authors: Barton Kristen I. , Heard Bryan J. , Kroker Andres , Sevick Johnathan L. , Raymond Duncan A. , Chung May , Achari Yamini , Martin C. Ryan , Frank Cyril B. , Boyd Steven K. , Shrive Nigel G. , Hart David A. 
Published: February 2021

Background: Severe injury to the knee joint often results in accelerated posttraumatic osteoarthritis (PTOA). In an ovine knee injury model, altered kinematics and degradation of the cartilage have been observed at 20 and 40 weeks after partial anterior cruciate ligament (ACL) transection (p-ACL Tx) surgery. However, changes to the integrity of the remaining intact intra-articular ligaments (posterolateral [PL] band and posterior cruciate ligament [PCL]) as well as the subchondral bone after anteromedial (AM) band Tx remain to be characterized. Purpose: (1) To investigate histological alterations to the remaining intact intra-articular ligaments, the synovium, and the infrapatellar fat pad (IPFP) and (2) to quantify subchondral bone changes at the contact surfaces of the proximal tibia at 20 and 40 weeks after AM band Tx. Study Design: Descriptive laboratory study. Methods: Mature female Suffolk cross sheep were allocated into 3 groups: nonoperative controls (n = 6), 20 weeks after partial ACL transection (p-ACL Tx; n = 5), and 40 weeks after p-ACL Tx (n = 6). Ligament, synovium, and IPFP sections were stained and graded. Tibial subchondral bone microarchitecture was assessed using high-resolution peripheral quantitative computed tomography. Results: p-ACL Tx of the AM band led to significant change in histological scores of the PL band and the PCL at 20 weeks after p-ACL Tx ( P = .031 and P = .033, respectively) and 40 weeks after p-ACL Tx ( P = .011 and P = .029) as compared with nonoperative controls. Alterations in inflammatory cells and collagen fiber orientation contributed to the greatest extent of the combined histological score in the PL band and PCL. p-ACL Tx did not lead to chronic activation of the synovium or IPFP. Trabecular bone mineral density was strongly inversely correlated with combined gross morphological damage in the top and middle layers of the subchondral bone in the lateral tibial plateau for animals at 40 weeks after p-ACL Tx. Conclusion: p-ACL Tx influences the integrity (biology and structure) of remaining intact intra-articular ligaments and bone microarchitecture in a partial knee injury ovine model. Clinical Relevance: p-ACL Tx leads to alterations in structural integrity of the remaining intact ligaments and degenerative changes in the trabecular bone mineral density, which may be detrimental to the injured athlete’s knee joint in the long term.
Total Ankle Arthroplasty With Valgus Deformity
Authors: Piga Camilo , Maccario Camilla , D’Ambrosi Riccardo , Romano Fausto , Usuelli Federico Giuseppe 
Published: February 2021

Background: A substantial coronal plane deformity is common in the context of end-stage ankle osteoarthritis. Recent literature shows a trend toward extending the indication of total ankle arthroplasty in increasingly severe coronal deformities, showing promising results when correct alignment is achieved. Nevertheless, the results of lateral transfibular total ankle replacement (LTTAR) in valgus has not been extensively studied. We aimed to evaluate if the outcomes of LTTAR in ankles with valgus deformity were similar to those with no major deformity at short-term follow-up. Methods: This retrospective cohort study included 228 LTTARs. Patients were classified into 2 groups according to the preoperative coronal plane tibiotalar angle (TTS): neutral (less than 10 degrees of coronal deformity, 209 patients) and valgus (above 10 degrees of valgus, 19 patients). Clinical evaluation was performed using the American Orthopaedic Foot & Ankle Society (AOFAS) score, visual analog scale (VAS), 12-Item Short Form Health Survey 12 (SF-12) regarding its Physical and Mental Component Summary items. The radiographic evaluation considered anteroposterior and lateral ankle radiographs. Complications were also registered and classified as major or minor. The minimum follow-up was 2 years. Results: The average AOFAS, VAS, and SF-12 scores improved significantly postoperatively ( P < .001), without differences between groups. At final radiographic follow-up, the valgus alignment group did not show significant differences with the neutral alignment group regarding TTS, lateral distal tibial angle, or anterior distal tibial angle ( P > .05). Conclusion: LTTAR in cases with valgus deformity achieved and maintained correction at short-term follow-up, as obtained in neutral alignment ankles. Clinical outcomes improved significantly regardless of preoperative valgus deformity. Level of Evidence: Prognostic Level III, retrospective cohort study.
Dosimetric Comparison of Helical Tomotherapy, Volumetric-Modulated Arc Therapy, and Intensity-Modulated Proton Therapy for Angiosarcoma of the Scalp
Authors: Mizuno Tomoki , Tomita Natsuo , Takaoka Taiki , Tomida Masashi , Fukuma Hiroshi , Tsuchiya Takahiro , Shibamoto Yuta 
Published: February 2021

Objective: We compared radiotherapy plans among helical tomotherapy (HT), volumetric-modulated arc therapy (VMAT), and intensity-modulated proton therapy (IMPT) for angiosarcoma of the scalp (AS). Methods: We conducted a planning study for 19 patients with AS. The clinical target volume (CTV) 1 and CTV2 were defined as the gross tumor volume with a specific margin and total scalp, respectively. For HT and VMAT, the planning target volume (PTV) 1 and PTV2 were defined as CTV1 and CTV2 with 0.5-cm margins, respectively. For IMPT, robust optimization was used instead of a CTV-PTV margin (i.e. CTV robust). The targets of the HT and VMAT plans were the PTV, whereas the IMPT plans targeted the CTV robust. In total, 70 Gy and 56 Gy were prescribed as the D95% (i.e. dose to 95% volume) of PTV1 (or CTV1 robust) and PTV2 (or CTV2 robust), respectively, using the simultaneous integrated boost (SIB) technique. Other constraint goals were also defined for the target and organs at risk (OAR). Results: All dose constraint parameters for the target and OAR met the goals within the acceptable ranges for the 3 techniques. The coverage of the targets replaced by D95% and D98% were almost equivalent among the 3 techniques. The homogeneity index of PTV1 or CTV1 robust was equivalent among the 3 techniques, whereas that of PTV2 or CTV2 robust was significantly higher in the IMPT plans than in the other plans. IMPT reduced the Dmean of the brain and hippocampus by 49% to 95%, and the Dmax of the spinal cord, brainstem, and optic pathway by 70% to 92% compared with the other techniques. Conclusion: The 3 techniques with SIB methods provided sufficient coverage and satisfactory homogeneity for the targets, but IMPT achieved the best OAR sparing.
Effects of Robotic Therapy Associated With Noninvasive Brain Stimulation on Upper-Limb Rehabilitation After Stroke: Systematic Review and Meta-analysis of Randomized Clinical Trials
Authors: Reis Suzana Bleckmann , Bernardo Wanderley Marques , Oshiro Carlos Andre , Krebs Hermano Igo , Conforto Adriana Bastos 
Published: February 2021

Background Robot-assisted therapy and noninvasive brain stimulation (NIBS) are promising strategies for stroke rehabilitation. Objective This systematic review and meta-analysis aims to evaluate the evidence of NIBS as an add-on intervention to robotic therapy in order to improve outcomes of upper-limb motor impairment or activity in individuals with stroke. Methods This study was performed according to the PRISMA Protocol and was previously registered on the PROSPERO Platform (CRD42017054563). Seven databases and gray literature were systematically searched by 2 reviewers, and 1176 registers were accessed. Eight randomized clinical trials with upper-limb body structure/function or activity limitation outcome measures were included. Subgroup analyses were performed according to phase poststroke, device characteristics (ie, arm support, joints involved, unimanual or bimanual training), NIBS paradigm, timing of stimulation, and number of sessions. The Grade-Pro Software was used to assess quality of the evidence. Results A nonsignificant homogeneous summary effect size was found both for body structure function domain (mean difference [MD] = 0.15; 95% CI = −3.10 to 3.40; P = 0.93; I2 = 0%) and activity limitation domain (standard MD = 0.03; 95% CI = −0.28 to 0.33; P = 0.87; I2 = 0%). Conclusions According to this systematic review and meta-analysis, at the moment, there are not enough data about the benefits of NIBS as an add-on intervention to robot-assisted therapy on upper-limb motor function or activity in individuals with stroke.
The Post-ICU presentation screen (PICUPS) and rehabilitation prescription (RP) for intensive care survivors part II: Clinical engagement and future directions for the national Post-Intensive care Rehabilitation Collaborative
Authors: Puthucheary Zudin , Brown Craig , Corner Evelyn , Wallace Sarah , Highfield Julie , Bear Danielle , Rehill Nirandeep , Montgomery Hugh , Aitken Leanne , Turner-Stokes Lynne 
Published: February 2021

Background Many Intensive Care Unit (ICU) survivors suffer from a multi- system disability, termed the post-intensive care syndrome. There is no current national coordination of either rehabilitation pathways or related data collection for them. In the last year, the need for tools to systematically identify the multidisciplinary rehabilitation needs of severely affected COVID-19 survivors has become clear. Such tools offer the opportunity to improve rehabilitation for all critical illness survivors through provision of a personalised Rehabilitation Prescription (RP). The initial development and secondary refinement of such an assessment and data tools is described in the linked paper. We report here the clinical and workforce data that was generated as a result. Methods Prospective service evaluation of 26 acute hospitals in England using the Post-ICU Presentation Screen (PICUPS) tool and the RP. The PICUPS tool comprised items in domains of a) Medical and essential care, b) Breathing and nutrition; c) Physical movement and d) Communication, cognition and behaviour. Results No difference was seen in total PICUPS scores between patients with or without COVID-19 (77 (IQR 60-92) vs. 84 (IQR 68-97); Mann-Whitney z = −1.46, p = 0.144. A network analysis demonstrated that requirements for physiotherapy, occupational therapy, speech and language therapy, dietetics and clinical psychology were closely related and unaffected by COVID-19 infection status. A greater proportion of COVID-19 patients were referred for inpatient rehabilitation (13% vs. 7%) and community-based rehabilitation (36% vs.15%). The RP informed by the PICUPS tool generally specified a greater need for multi-professional input when compared to rehabilitation plans instituted. Conclusions The PICUPS tool is feasible to implement as a screening mechanism for post-intensive care syndrome. No differences are seen in the rehabilitation needs of patients with and without COVID-19 infection. The RP could be the vehicle that drives the professional interventions across the transitions from acute to community care. No single discipline dominates the rehabilitation requirements of these patients, reinforcing the need for a personalised RP for critical illness survivors.