bluuebunny/crossref_metadata_2025_split huggingface dataset:
Variable Impact of COVID-19 Lockdown on Air Quality across 91 Indian Cities
Authors: Khan Ansar , Khorat Samiran , Khatun Rupali , Doan Quang-Van , Nair U. S. , Niyogi Dev 
Published: April 2021

AbstractIndia responded to the severe acute respiratory syndrome (SARS) coronavirus disease 2019 (COVID-19) pandemic through a three-phase nationwide lockdown: 25 March–14 April, 15 April–3 May, and 4–17 May 2020. We utilized this unique opportunity to assess the impact of restrictions on the air quality of Indian cities. We conducted comprehensive statistical assessments for the air quality index (AQI) and criteria pollutant concentrations for 91 cities during the lockdown phases relative to the preceding seven days (prelockdown phase of 18–24 March 2020) and to corresponding values from the same days of the year in 2019. Both comparisons show statistically significant countrywide mean decrease in AQI (33%), PM2.5 (36%), PM10 (40%), NO2 (58%), O3 (5%), SO2 (25%), NH3 (28%), and CO (60%). These reductions represent a background or the lower bound of air quality burden of industrial and transportation sectors. The northern region was most impacted by the first two phases of the lockdown, whereas the southern region was most affected in the last phase. The northeastern region was least affected, followed by the eastern region, which also showed an increase in O3 during the lockdown. Analysis of satellite-retrieved aerosol optical depth (AOD) shows that effects of restrictions on particulate pollution were variable—locally confined in some areas or having a broader impact in other regions. Anomalous behavior over the eastern region suggests a differing role of regional societal response or meteorological conditions. The study results have policy implications because they provide the observational background values for the industrial and transportation sector’s contribution to urban pollution.
A Northern Hemispheric Wave Train Associated with Interannual Variations in the Bermuda High during Boreal Summer
Authors: Luo Haochang , Adames Ángel F. , Rood Richard B. 
Published: April 2021

AbstractThe processes that lead to the spatial and temporal evolution of the Bermuda high (BH) during July and August (JA) are investigated on the basis of linear regression analysis. The analysis is based on a Bermuda high index (BHI): the difference in standardized, deseasonalized, and detrended sea level pressure (SLP) between northeast of Bermuda (40°N, 60°W) and New Orleans (30°N, 90°W). Negative values of BHI indicate a westward expansion of the Bermuda high relative to its climatological-mean location and reduced precipitation in the southeastern United States (SEUS), whereas positive values correspond to BH contraction and enhanced precipitation in the SEUS. Linear regression of the 200-hPa geopotential height based on the BHI reveals the existence of a Rossby wave train that extends zonally from the eastern North Pacific to the eastern North Atlantic. The troughs and ridges associated with this wave train are spatially collocated with the climatological-mean jet stream, indicating that the jet serves as their waveguide. Anomalous troughing in the SEUS associated with this wave train is linked to the contraction of the Bermuda high during JA. The enhanced precipitation is associated with anomalous ascent to the east and south of this trough where anomalous warm advection is observed. Based on these results, it is hypothesized that this Rossby wave train may partially explain the occurrence of suppressed precipitation tied to midsummer drought in the SEUS during July and August. It is found that the BHI has trended from negative to positive in recent decades, suggesting that it may be influenced by low-frequency variability.
Diurnal Variations in Rainfall and Precipitation Asymmetry of Tropical Cyclones in the Northwest Pacific Region
Authors: Zhang Xinyan , Xu Weixin 
Published: April 2021

AbstractThis study investigates diurnal variations of tropical cyclone precipitation in the northwest Pacific (NWP) region, including the South China Sea (SCS) and adjacent landmasses. Diurnal cycles of TC rainfall show significant land-sea contrasts. The primary peak of (unconditional) mean TC rain rate occurs in the early morning (06 LT) and the afternoon (15 LT) over the ocean and land, respectively. Both the total and heavy TC precipitation extend further inland in the afternoon, while nocturnal heavy TC rain is more confined to the coast. A significant semidiurnal cycle of TC precipitation is observed over the ocean, i.e., a secondary peak near 18 LT. The diurnal cycle of TC rainfall also depends on precipitation frequency, intensity, and radial distance from the TC center. Over the ocean, though TC precipitation intensity shows a pronounced diurnal cycle, its precipitation frequency exhibits virtually no diurnal variation. Over land, TC precipitation frequency markedly peaks in the afternoon (15 LT), while its precipitation intensity interestingly maximizes in the early morning (03-06 LT). Diurnal variations of TC asymmetric rainfall structure are consistent with diurnal changes of vertical wind shear. Over the SCS, maximum precipitation located in the downshear-left quadrant and is the most extensive in the morning. However, this heavy rain area shrinks and shifts downshear-ward in the afternoon, consistent with changes of the magnitude (reduced) and direction (clockwise) of shear. In contrast, TCs over the open ocean of NWP (OWP) have little diurnal variability of precipitation asymmetry, due mainly to a diurnally invariant shear environment.
Internal salt content: a useful framework for understanding the oceanic branch of the water cycle
Authors: Bladwell Christopher , Holmes Ryan M. , Zika Jan D. 
Published: April 2021

AbstractThe global water cycle is dominated by an atmospheric branch which transfers fresh water away from subtropical regions and an oceanic branch which returns that fresh water from subpolar and tropical regions. Salt content is commonly used to understand the oceanic branch because surface freshwater fluxes leave an imprint on ocean salinity. However, freshwater fluxes do not actually change the amount of salt in the ocean and – in the mean – no salt is transported meridionally by ocean circulation. To study the processes which determine ocean salinity we introduce a new variable: “internal salt” and its counterpart “internal fresh water”. Precise budgets for internal salt in salinity coordinates relate meridional and diahaline transport to surface freshwater forcing, ocean circulation and mixing, and reveal the pathway of fresh water in the ocean. We apply this framework to a 1° global ocean model. We find that in order for fresh water to be exported from the ocean’s tropical and subpolar regions to the subtropics, salt must be mixed across the salinity surfaces that bound those regions. In the tropics, this mixing is achieved by parameterized vertical mixing, along-isopycnal mixing, and numerical mixing associated with truncation errors in the model’s advection scheme, while along-isopycnal mixing dominates at high latitudes. We analyze the internal freshwater budgets of the Indo-Pacific and Atlantic Ocean basins and identify the transport pathways between them which redistribute fresh water added through precipitation, balancing asymmetries in freshwater forcing between the basins.
Broadscale Assessment of Groundhog (Marmota monax) Predictions of Spring Onset No Better than Chance
Authors: Ross Alexander J. , Grow Ryan C. , Hayhurst Lauren D. , MacLeod Haley A. , McKee Graydon I. , Stratton Kyle W. , Wegher Marissa E. , Rennie Michael D. 
Published: April 2021

AbstractGroundhog Day is a widespread North American ritual that marks the onset of spring, with festivities centered around animals that humans believe have abilities to make seasonal predictions. Yet, the collective success of groundhog Marmota monax prognosticators has never been rigorously tested. Here, we propose the local climate-predicted phenology of early blooming spring plants (Carolina spring beauty, or Claytonia caroliniana, which overlaps in native range with groundhogs) as a novel and relevant descriptor of spring onset that can be applied comparatively across a broad geographical range. Of 530 unique groundhog-year predictions across 33 different locations, spring onset was correctly predicted by groundhogs exactly 50% of the time. While no singular groundhog predicted the timing of spring with any statistical significance, there were a handful of groundhogs with notable records of both successful and unsuccessful predictions: Essex Ed (Essex, Connecticut), Stonewall Jackson (Wantage, New Jersey), and Chuckles (Manchester, Connecticut) correctly predicted spring onset over 70% of the time. By contrast, Buckeye Chuck (Marion, Ohio), Dunkirk Dave (Dunkirk, New York), and Holland Huckleberry (Holland, Ohio) made incorrect predictions over 70% of the time. The two most widely recognized and long-tenured groundhogs in their respective countries—Wiarton Willie (Canada) and Punxsutawney Phil (United States)—had success rates of 54% and 52%, respectively, despite over 150 collective guesses. Using a novel phenological indicator of spring, this study determined, without a shadow of a doubt, that groundhog prognosticating abilities for the arrival of spring are no better than chance.
Antenatal care service satisfaction and its associated factors among pregnant women in public health centres in Hawassa city, Southern Ethiopia
Authors: Lire Tsegaye , Megerssa Berhane , Asefa Yisalemush , Hirigo Agete Tadewos 
Published: April 2021

Background: Self-reported client satisfaction is vital in order to address service provider and facility-based factors that can be upgraded to maximise antenatal care (ANC) satisfaction and utilisation in service-providing institutions. Objective: This study aimed to assess ANC service satisfaction and associated factors among pregnant women attending Hawassa city public health centres (HC), Sidama regional state, Southern Ethiopia. Methods: This health facility–based cross-sectional study was conducted on 422 pregnant women from 14 March to 13 April 2017. Exit interview data were collected from pregnant women attending care service at five randomly selected public HC. Results: Overall, 79.2% were satisfied with the ANC service. As per specific components, 74.2% of respondents were satisfied with the information provided, and 74.2% were satisfied with the institution’s health care. Respondents who had received iron tablets were 3.2 times more likely to be satisfied than their counterparts (adjusted odds ratio (AOR)=3.2, 95% confidence interval (CI) 1.7–5.9). Pregnant women who were counselled on human immunodeficiency virus infection and its testing were 4.3 times more likely to be satisfied than those who had not received such counselling (AOR=4.3, 95% CI 2.2–8.4). Also, those women who waited ⩽30 minutes (AOR=2.6, 95% CI 1.2–5.5) and who received information on foetal movement (AOR=3.5, 95% CI 1.8–6.5) were significantly associated with ANC service satisfaction. Conclusion: More than 20% of pregnant women were not satisfied with ANC services. This reflects a need for attention in each aspect of health-care service provision in order to assure client satisfaction.
Compositional variation and genesis of pyrochlore, belkovite and baotite from the Sevattur carbonatite complex, India
Authors: Dey Monojit , Bhattacharjee Sourav , Chakrabarty Aniket , Mitchell Roger H. , Pal Supriyo , Pal Supratim , Sen Amit Kumar 
Published: April 2021

AbstractPyrochlore-group minerals are common in the Neoproterozoic Sevattur carbonatite complex. This complex is composed of dolomite-, calcite-, banded- and blue carbonatite together with pyroxenite, albitite and diverse syenites. This work reports the paragenetic-textural types and compositional variation of pyrochlore hosted by dolomite carbonatite, banded carbonatite and albitite together with that of alteration assemblages containing belkovite and baotite. On the basis of composition, five different types of pyrochlore are recognised and termed Pcl-I through to Pcl-V. The Pb-rich Pcl-I are present exclusively as inclusions in U-rich Pcl-IIa in dolomite carbonatite. The alteration assemblages of Pb-poor Pcl-IIb + Ba-rich or Ba–Si- rich Pcl-IV + belkovite (dolomite carbonatite) and Si-rich Pcl-V + baotite (banded carbonatite) formed after Pcl-IIa differ in these carbonatites. The albitite hosts extremely U-Ti-rich Pcl-III, mantled by Ba-rich potassium feldspar. In common with the banded carbonatite, Pcl-V is formed by alteration of Pcl-III where this mantle is partially, or completely broken. The Ba-Si-enrichment of Pcl-IV and Pcl-V together with the ubiquitous presence of baryte in all Sevattur lithologies suggests late-stage interaction with a Ba-Si-rich acidic hydrothermal fluid. This fluid was responsible for leaching silica from the associated silicates and produced Pcl-V in the silicate-rich lithologies of the banded carbonatite and albitite. The absence of Pcl-V in dolomite carbonatite is a consequence of the low modal abundance of silicates. The complex compositional diversity and lithology specific pyrochlore alteration assemblages suggest that all pyrochlore (Pcl-I to Pcl-IV) were formed initially in an unknown source and transported subsequently in their respective hosts as altered antecrysts.
The use of proteomics for blood biomarker research in premature infants: a scoping review
Authors: Letunica Natasha , Cai Tengyi , Cheong Jeanie L. Y. , Doyle Lex W. , Monagle Paul , Ignjatovic Vera 
Published: April 2021

AbstractOver the last decade, the use of proteomics in the setting of prematurity has increased and has enabled researchers to successfully identify biomarkers for an array of associated morbidities. The objective of this scoping review was to identify the existing literature, as well as any knowledge gaps related to proteomic biomarker discoveries in the setting of prematurity. A scoping review was conducted using PubMed, Embase and Medline databases following the Preferred Reporting Items for Systematic reviews and Meta-Analyses extension for Scoping Reviews (PRISMA-ScR) guidelines. The study selection process yielded a total of 700 records, of which 13 studies were included in this review. Most studies used a tandem Mass Spectrometry (MS/MS) proteomics approach to identify key biomarkers. The corresponding studies identified proteins associated with retinopathy of prematurity (ROP), bronchopulmonary dysplasia (BPD), necrotising enterocolitis (NEC), late onset sepsis (LOS) and gestational age. This scoping review demonstrates the limited use of proteomics to identify biomarkers associated with severe complications of prematurity. Further research is warranted to identify biomarkers of other important morbidities associated with prematurity, such as intraventricular haemorrhage (IVH) and cerebral palsy, and to investigate the mechanisms associated with these outcomes.
Genetic diversity in global chicken breeds in relation to their genetic distances to wild populations
Authors: Malomane Dorcus Kholofelo , Weigend Steffen , Schmitt Armin Otto , Weigend Annett , Reimer Christian , Simianer Henner 
Published: April 2021

AbstractBackgroundMigration of a population from its founder population is expected to cause a reduction of its genetic diversity and facilitates differentiation between the population and its founder population, as predicted by the theory of genetic isolation by distance. Consistent with that theory, a model of expansion from a single founder predicts that patterns of genetic diversity in populations can be explained well by their geographic expansion from their founders, which is correlated with genetic differentiation.MethodsTo investigate this in chicken, we estimated the relationship between the genetic diversity of 160 domesticated chicken populations and their genetic distances to wild chicken populations.ResultsOur results show a strong inverse relationship, i.e. 88.6% of the variation in the overall genetic diversity of domesticated chicken populations was explained by their genetic distance to the wild populations. We also investigated whether the patterns of genetic diversity of different types of single nucleotide polymorphisms (SNPs) and genes are similar to that of the overall genome. Among the SNP classes, the non-synonymous SNPs deviated most from the overall genome. However, genetic distance to the wild chicken still explained more variation in domesticated chicken diversity across all SNP classes, which ranged from 83.0 to 89.3%.ConclusionsGenetic distance between domesticated chicken populations and their wild relatives can predict the genetic diversity of the domesticated populations. On the one hand, genes with little genetic variation across populations, regardless of the genetic distance to the wild population, are associated with major functions such as brain development. Changes in such genes may be detrimental to the species. On the other hand, genetic diversity seems to change at a faster rate within genes that are associated with e.g. protein transport and protein and lipid metabolic processes. In general, such genes may be flexible to changes according to the populations’ needs. These results contribute to the knowledge of the evolutionary patterns of different functional genomic regions in the chicken.
Analysis of temporal gene regulation of Listeria monocytogenes revealed distinct regulatory response modes after exposure to high pressure processing
Authors: Nikparvar Bahareh , Andreevskaya Margarita , Duru Ilhan C. , Bucur Florentina I. , Grigore-Gurgu Leontina , Borda Daniela , Nicolau Anca I. , Riedel Christian U. , Auvinen Petri , Bar Nadav 
Published: April 2021

Abstract
Background
The pathogen Listeria (L.) monocytogenes is known to survive heat, cold, high pressure, and other extreme conditions. Although the response of this pathogen to pH, osmotic, temperature, and oxidative stress has been studied extensively, its reaction to the stress produced by high pressure processing HPP (which is a preservation method in the food industry), and the activated gene regulatory network (GRN) in response to this stress is still largely unknown.

Results
We used RNA sequencing transcriptome data of L. monocytogenes (ScottA) treated at 400 MPa and 8∘C, for 8 min and combined it with current information in the literature to create a transcriptional regulation database, depicting the relationship between transcription factors (TFs) and their target genes (TGs) in L. monocytogenes. We then applied network component analysis (NCA), a matrix decomposition method, to reconstruct the activities of the TFs over time. According to our findings, L. monocytogenes responded to the stress applied during HPP by three statistically different gene regulation modes: survival mode during the first 10 min post-treatment, repair mode during 1 h post-treatment, and re-growth mode beyond 6 h after HPP. We identified the TFs and their TGs that were responsible for each of the modes. We developed a plausible model that could explain the regulatory mechanism that L. monocytogenes activated through the well-studied CIRCE operon via the regulator HrcA during the survival mode.

Conclusions
Our findings suggest that the timely activation of TFs associated with an immediate stress response, followed by the expression of genes for repair purposes, and then re-growth and metabolism, could be a strategy of L. monocytogenes to survive and recover extreme HPP conditions. We believe that our results give a better understanding of L. monocytogenes behavior after exposure to high pressure that may lead to the design of a specific knock-out process to target the genes or mechanisms. The results can help the food industry select appropriate HPP conditions to prevent L. monocytogenes recovery during food storage.
Development of a pre-hospital emergencies protocol for the management of suicidal patients in Iran
Authors: Shirzad Fatemeh , Gholamzad Shakiba , Shafiee Maisam , Shariat Seyed Vahid 
Published: April 2021

Abstract
Background
Suicide is a painful consequence of many psychiatric disorders and one of the most frequent psychiatric emergencies. Generally, pre-hospital technician is the first person in the treatment chain who attends the situation; hence, his/her sound clinical judgment and professional behavior can play an important role in preventing or stopping the suicide process. We tried to develop a concise, evidence-based, and step-by-step guide for dealing with a suicidal patient, which could be quickly reviewed by technicians before confronting a suicide situation.

Method
We reviewed the literature for suicide management plans and protocols, to extract the evidence-based interventions and instructions for dealing with a suicide situation. Then, we discussed the extracted material in an expert panel, and developed the initial version of the protocol considering the local socio-cultural issues and available facilities. Subsequently, we reviewed the protocol in a meeting with pre-hospital technicians and emergency physicians, to receive their feedback and address any possible executive problems. Finally, we revised the protocol to its final version considering the feedbacks.

Results
The basic principles of dealing with a suicidal patient are similar to other psychiatric emergencies and include: Patient Safety; Patient evaluation and diagnosis; and Patient (behavioral and pharmacological) management. However, specific considerations should be taken into account and special arrangements are necessary for suicidal patients. Whether the patient has attempted suicide or not, would guide the management to one of the two major paths. In addition, the needs of the family should be considered.

Conclusion
A locally adapted protocol considering existing facilities in the emergency system and cultural issues in Iranian society is provided for pre-hospital emergency technicians.