bluuebunny/crossref_metadata_2025_split huggingface dataset:
Observation of Bloch oscillations and Wannier-Stark localization on a superconducting quantum processor
Authors: Guo Xue-Yi , Ge Zi-Yong , Li Hekang , Wang Zhan , Zhang Yu-Ran , Song Pengtao , Xiang Zhongcheng , Song Xiaohui , Jin Yirong , Lu Li , Xu Kai , Zheng Dongning , Fan Heng 
Published: March 2021

AbstractThe Bloch oscillation (BO) and Wannier-Stark localization (WSL) are fundamental concepts about metal-insulator transitions in condensed matter physics. These phenomena have also been observed in semiconductor superlattices and simulated in platforms such as photonic waveguide arrays and cold atoms. Here, we report experimental investigation of BOs and WSL simulated with a 5-qubit programmable superconducting processor, of which the effective Hamiltonian is an isotropic XY spin chain. When applying a linear potential to the system by properly tuning all individual qubits, we observe that the propagation of a single spin on the chain is suppressed. It tends to oscillate near the neighborhood of their initial positions, which demonstrates the characteristics of BOs and WSL. We verify that the WSL length is inversely correlated to the potential gradient. Benefiting from the precise single-shot simultaneous readout of all qubits in our experiments, we can also investigate the thermal transport, which requires the joint measurement of more than one qubits. The experimental results show that, as an essential characteristic for BOs and WSL, the thermal transport is also blocked under a linear potential. Our experiment would be scalable to more superconducting qubits for simulating various of out-of-equilibrium problems in quantum many-body systems.
The Amsterdam Open MRI Collection, a set of multimodal MRI datasets for individual difference analyses
Authors: Snoek Lukas , van der Miesen Maite M. , Beemsterboer Tinka , van der Leij Andries , Eigenhuis Annemarie , Steven Scholte H. 
Published: March 2021

AbstractWe present the Amsterdam Open MRI Collection (AOMIC): three datasets with multimodal (3 T) MRI data including structural (T1-weighted), diffusion-weighted, and (resting-state and task-based) functional BOLD MRI data, as well as detailed demographics and psychometric variables from a large set of healthy participants (N = 928, N = 226, and N = 216). Notably, task-based fMRI was collected during various robust paradigms (targeting naturalistic vision, emotion perception, working memory, face perception, cognitive conflict and control, and response inhibition) for which extensively annotated event-files are available. For each dataset and data modality, we provide the data in both raw and preprocessed form (both compliant with the Brain Imaging Data Structure), which were subjected to extensive (automated and manual) quality control. All data is publicly available from the OpenNeuro data sharing platform.
Neuropsychiatric profiles and conversion to dementia in mild cognitive impairment, a latent class analysis
Authors: Roberto Natalia , Portella Maria J. , Marquié Marta , Alegret Montserrat , Hernández Isabel , Mauleón Ana , Rosende-Roca Maitee , Abdelnour Carla , de Antonio Ester Esteban , Gil Silvia , Tartari Juan P. , Vargas Liliana , Espinosa Ana , Ortega Gemma , Pérez-Cordón Alba , Sanabria Ángela , Orellana Adelina , de Rojas Itziar , Moreno-Grau Sonia , Montrreal Laura , Alarcón-Martín Emilio , Ruíz Agustín , Tárraga Lluís , Boada Mercè , Valero Sergi 
Published: March 2021

AbstractNeuropsychiatric symptoms (NPS) have been recently addressed as risk factors of conversion to Alzheimer’s disease (AD) and other dementia types in patients diagnosed with Mild Cognitive Impairment (MCI). Our aim was to determine profiles based on the prominent NPS in MCI patients and to explore the predictive value of these profiles on conversion to specific types of dementia. A total of 2137 MCI patients monitored in a memory clinic were included in the study. Four NPS profiles emerged (classes), which were defined by preeminent symptoms: Irritability, Apathy, Anxiety/Depression and Asymptomatic. Irritability and Apathy were predictors of conversion to dementia (HR = 1.43 and 1.56, respectively). Anxiety/depression class showed no risk effect of conversion when compared to Asymptomatic class. Irritability class appeared as the most discriminant neuropsychiatric condition to identify non-AD converters (i.e., frontotemporal dementia, vascular dementia, Parkinson’s disease and dementia with Lewy Bodies). The findings revealed that consistent subgroups of MCI patients could be identified among comorbid basal NPS. The preeminent NPS showed to behave differentially on conversion to dementia, beyond AD. Therefore, NPS should be used as early diagnosis facilitators, and should also guide clinicians to detect patients with different illness trajectories in the progression of MCI.
Unravelling the multi-scale structure–property relationship of laser powder bed fusion processed and heat-treated AlSi10Mg
Authors: Van Cauwenbergh P. , Samaee V. , Thijs L. , Nejezchlebová J. , Sedlák P. , Iveković A. , Schryvers D. , Van Hooreweder B. , Vanmeensel K. 
Published: March 2021

AbstractTailoring heat treatments for Laser Powder Bed Fusion (LPBF) processed materials is critical to ensure superior and repeatable material properties for high-end applications. This tailoring requires in-depth understanding of the LPBF-processed material. Therefore, the current study aims at unravelling the threefold interrelationship between the process (LPBF and heat treatment), the microstructure at different scales (macro-, meso-, micro-, and nano-scale), and the macroscopic material properties of AlSi10Mg. A similar solidification trajectory applies at different length scales when comparing the solidification of AlSi10Mg, ranging from mould-casting to rapid solidification (LPBF). The similarity in solidification trajectories triggers the reason why the Brody-Flemings cellular microsegregation solidification model could predict the cellular morphology of the LPBF as-printed microstructure. Where rapid solidification occurs at a much finer scale, the LPBF microstructure exhibits a significant grain refinement and a high degree of silicon (Si) supersaturation. This study has identified the grain refinement and Si supersaturation as critical assets of the as-printed microstructure, playing a vital role in achieving superior mechanical and thermal properties during heat treatment. Next, an electrical conductivity model could accurately predict the Si solute concentration in LPBF-processed and heat-treated AlSi10Mg and allows understanding the microstructural evolution during heat treatment. The LPBF-processed and heat-treated AlSi10Mg conditions (as-built (AB), direct-aged (DA), stress-relieved (SR), preheated (PH)) show an interesting range of superior mechanical properties (tensile strength: 300–450 MPa, elongation: 4–13%) compared to the mould-cast T6 reference condition.
Mosquitoes of the Maculipennis complex in Northern Italy
Authors: Calzolari Mattia , Desiato Rosanna , Albieri Alessandro , Bellavia Veronica , Bertola Michela , Bonilauri Paolo , Callegari Emanuele , Canziani Sabrina , Lelli Davide , Mosca Andrea , Mulatti Paolo , Peletto Simone , Ravagnan Silvia , Roberto Paolo , Torri Deborah , Pombi Marco , Di Luca Marco , Montarsi Fabrizio 
Published: March 2021

AbstractThe correct identification of mosquito vectors is often hampered by the presence of morphologically indiscernible sibling species. The Maculipennis complex is one of these groups that include both malaria vectors of primary importance and species of low/negligible epidemiological relevance, of which distribution data in Italy are outdated. Our study was aimed at providing an updated distribution of Maculipennis complex in Northern Italy through the sampling and morphological/molecular identification of specimens from five regions. The most abundant species was Anopheles messeae (2032), followed by Anopheles maculipennis s.s. (418), Anopheles atroparvus (28) and Anopheles melanoon (13). Taking advantage of ITS2 barcoding, we were able to finely characterize tested mosquitoes, classifying all the Anopheles messeae specimens as Anopheles daciae, a taxon with debated rank to which we referred as species inquirenda (sp. inq.). The distribution of species was characterized by Ecological Niche Models (ENMs), fed by recorded points of presence. ENMs provided clues on the ecological preferences of the detected species, with An. daciae sp. inq. linked to stable breeding sites and An. maculipennis s.s. more associated to ephemeral breeding sites. We demonstrate that historical Anopheles malaria vectors are still present in Northern Italy.
Exact dimer phase with anisotropic interaction for one dimensional magnets
Authors: Xu Hong-Ze , Zhang Shun-Yao , Guo Guang-Can , Gong Ming 
Published: March 2021

AbstractWe report the exact dimer phase, in which the ground states are described by product of singlet dimer, in the extended XYZ model by generalizing the isotropic Majumdar–Ghosh model to the fully anisotropic region. We demonstrate that this phase can be realized even in models when antiferromagnetic interaction along one of the three directions. This model also supports three different ferromagnetic (FM) phases, denoted as x-FM, y-FM and z-FM, polarized along the three directions. The boundaries between the exact dimer phase and FM phases are infinite-fold degenerate. The breaking of this infinite-fold degeneracy by either translational symmetry breaking or $${\mathbb {Z}}_2$$

Z
2

symmetry breaking leads to exact dimer phase and FM phases, respectively. Moreover, the boundaries between the three FM phases are critical with central charge $$c=1$$

c
=
1

for free fermions. We characterize the properties of these boundaries using entanglement entropy, excitation gap, and long-range spin–spin correlation functions. These results are relevant to a large number of one dimensional magnets, in which anisotropy is necessary to isolate a single chain out from the bulk material. We discuss the possible experimental signatures in realistic materials with magnetic field along different directions and show that the anisotropy may resolve the disagreement between theory and experiments based on isotropic spin-spin interactions.
A single arm trial using passive simulated jogging for blunting acute hyperglycemia
Authors: Adams Jose A. , Lopez Jose R. , Banderas Veronica , Sackner Marvin A. 
Published: March 2021

AbstractGlycemic fluctuations increase oxidative stress, promote endothelial dysfunction and cardiovascular disease. Reducing glycemic fluctuations is beneficial. We previously reported that a portable motorized passive simulated jogging device, (JD) reduces 24 h glycemic indices in type 2 and non-diabetic subjects. This study evaluates effectiveness and feasibility of JD in blunting large glycemic fluctuation induced by an oral glucose tolerance test (OGTT). The study was performed in 10 adult participants mean age 41.3 ± 13.5 year using interstitial glucose monitor (IG). Each participant fasted for 8 h. followed by an OGTT (Pre-JD), thereafter JD was used for 90 min per day for 7 days, without change to diet or activities of daily living. A repeat OGTT (Post-JD) was performed after completion. The integrated area under the curve (iAUC2h–4h) was computed for the OGTT Pre-JD and Post-JD. Seven days of JD blunted the glucose fluctuation produced by OGTT. JD decreased AUC2h by 17 ± 4.7% and iAUC4h by 15 ± 5.9% (p < 0.03). In healthy mostly obese participants 7 days of JD blunts the hyperglycemic response produced by an OGTT. JD may be an adjunct to current glycemic management, it can be applied in different postures for those who cannot (due to physical or cognitive limitations) or will not exercise.Trial registration:ClinicalTrials.gov NCT03550105 (08-06-2018).
Functional profiling of COVID-19 respiratory tract microbiomes
Authors: Haiminen Niina , Utro Filippo , Seabolt Ed , Parida Laxmi 
Published: March 2021

AbstractIn response to the ongoing global pandemic, characterizing the molecular-level host interactions of the new coronavirus SARS-CoV-2 responsible for COVID-19 has been at the center of unprecedented scientific focus. However, when the virus enters the body it also interacts with the micro-organisms already inhabiting the host. Understanding the virus-host-microbiome interactions can yield additional insights into the biological processes perturbed by viral invasion. Alterations in the gut microbiome species and metabolites have been noted during respiratory viral infections, possibly impacting the lungs via gut-lung microbiome crosstalk. To better characterize microbial functions in the lower respiratory tract during COVID-19 infection, we carry out a functional analysis of previously published metatranscriptome sequencing data of bronchoalveolar lavage fluid from eight COVID-19 cases, twenty-five community-acquired pneumonia patients, and twenty healthy controls. The functional profiles resulting from comparing the sequences against annotated microbial protein domains clearly separate the cohorts. By examining the associated metabolic pathways, distinguishing functional signatures in COVID-19 respiratory tract microbiomes are identified, including decreased potential for lipid metabolism and glycan biosynthesis and metabolism pathways, and increased potential for carbohydrate metabolism pathways. The results include overlap between previous studies on COVID-19 microbiomes, including decrease in the glycosaminoglycan degradation pathway and increase in carbohydrate metabolism. The results also suggest novel connections to consider, possibly specific to the lower respiratory tract microbiome, calling for further research on microbial functions and host-microbiome interactions during SARS-CoV-2 infection.
A 3D analytical ion transport model for ionic polymer metal composite actuators in large bending deformations
Authors: Annabestani Mohsen , Naghavi Nadia , Maymandi-Nejad Mohammad 
Published: March 2021

AbstractIonic polymer metal composites (IPMCs) are a kind of soft electroactive polymer composites. An IPMC strip commonly has a thin polymer membrane coated with a noble metal as electrodes on both sides. Whenever an electric voltage is applied to the IPMC, it bends and whenever it is deformed, a low voltage is measurable between its electrodes, hence IPMC is an actuator as well as a sensor. They are well known for their promising features like low density, lightness, high toughness and remarkable stimulus strain, also, they have the potential for low-voltage operation while exhibiting acceptable large bending deformation. In this paper, a three-dimensional (3D), dynamic and physics-based model is presented analytically and experimentally for IPMC actuators. The model combines the ion transport dynamics within the IPMC and the bending dynamics of it as a beam under an electrical stimulation. In particular, we present an analytical model to create a relation between the input voltage and the output tip displacement of an IPMC actuator for large bending deformations. Experimental results show that the proposed model captures well the tip displacement.
Interaction of polyethylene glycol with cytochrome c investigated via in vitro and in silico approaches
Authors: Parray Zahoor Ahmad , Ahmad Faizan , Alajmi Mohamed F. , Hussain Afzal , Hassan Md. Imtaiyaz , Islam Asimul 
Published: March 2021

AbstractOne of the significant proteins that have attracted research groups due to virtue of being a potent selective anticancer drug target and property of triggering apoptosis upon release in cytoplasm is cytochrome c (cyt c). The mechanical transformations due to the macromolecular crowding in membrane in the mammalian cell are proposed to be useful inductors of changes in volume. It is very interesting to know that mitochondrial function were observed to be improved by polyethylene glycol (PEG) interaction, which in turn inhibits the cyt c (a pro-apoptotic cell death factor). In this work, the effect of polyethylene glycol of molecular weight 4 kilo Dalton (PEG 4 kDa) was investigated to highlight the structural transformations (tertiary and secondary structure) in cyt c using a choice of spectroscopic techniques (including UV–Vis absorption, near-UV, far-UV and Soret circular dichroism and fluorescence spectroscopy), which shows noteworthy shifts in the secondary and tertiary structures at higher concentrations of PEG 4 kDa with small changes in the heme-globular interactions. The size distribution changes of native protein treated with various concentrations of the crowder were observed and analyzed by dynamic light scattering (DLS). The interaction studies of the crowder with the protein was observed and analyzed by FTIR, isothermal titration calorimetry, time resolved fluorescence and molecular docking. The investigations suggested that the structural changes in the protein occurred due to soft interactions of PEG 4 kDa, which usually destabilizes proteins. The experimental evidence in this study proposed that crowding could be another approach to mechanical super-competition and free of certain markers that could aid in the identification and control of various diseases. This study suggests that crowders at specific concentrations, which softly interact with proteins, can be exploited as remedy for various diseases.
3D printing of a bio-based ink made of cross-linked cellulose nanofibrils with various metal cations
Authors: Mietner J. Benedikt , Jiang Xuehe , Edlund Ulrica , Saake Bodo , Navarro Julien R. G. 
Published: March 2021

AbstractIn this work, we present an approach to cross-link cellulose nanofibrils (CNFs) with various metallic cations (Fe3+, Al3+, Ca2+, and Mg2+) to produce inks suitable for three-dimensional (3D) printing application. The printability of each hydrogel ink was evaluated, and several parameters such as the optimal ratio of Mn+:TOCNF:H2O were discussed. CNF suspensions were produced by mechanical disintegration of cellulose pulp with a microfluidizer and then oxidized with 2,2,6,6-tetramethylpiperidine-1-oxyl (TEMPO). Finally, metal cations were introduced to the deprotonated TEMPO-oxidized CNF (TOCNF) suspension to cross-link the nanofibrils and form the corresponding hydrogels. The performances of each gel-ink were evaluated by rheological measurements and 3D printing. Only the gels incorporated with divalent cations Ca2+ and Mg2+ were suitable for 3D printing. The 3D printed structures were freeze-dried and characterized with Fourier transform infrared spectroscopy (FT-IR) and Scanning Electron Microscopy (SEM). The better interaction of the TOCNFs with the divalent metallic cations in terms of printability, the viscoelastic properties of the inks, and the variation trends owing to various metal cations and ratios are discussed.
Genome-wide association study suggests that variation at the RCOR1 locus is associated with tinnitus in UK Biobank
Authors: Wells Helena R. R. , Abidin Fatin N. Zainul , Freidin Maxim B. , Williams Frances M. K. , Dawson Sally J. 
Published: March 2021

AbstractTinnitus is a prevalent condition in which perception of sound occurs without an external stimulus. It is often associated with pre-existing hearing loss or noise-induced damage to the auditory system. In some individuals it occurs frequently or even continuously and leads to considerable distress and difficulty sleeping. There is little knowledge of the molecular mechanisms involved in tinnitus which has hindered the development of treatments. Evidence suggests that tinnitus has a heritable component although previous genetic studies have not established specific risk factors. From a total of 172,608 UK Biobank participants who answered questions on tinnitus we performed a case–control genome-wide association study for self-reported tinnitus. Final sample size used in association analysis was N = 91,424. Three variants in close proximity to the RCOR1 gene reached genome wide significance: rs4906228 (p = 1.7E−08), rs4900545 (p = 1.8E−08) and 14:103042287_CT_C (p = 3.50E−08). RCOR1 encodes REST Corepressor 1, a component of a co-repressor complex involved in repressing neuronal gene expression in non-neuronal cells. Eleven other independent genetic loci reached a suggestive significance threshold of p < 1E−06.
Randomized, crossover clinical efficacy trial in humans and mice on tear secretion promotion and lacrimal gland protection by molecular hydrogen
Authors: Kubota Miyuki , Kawashima Motoko , Inoue Sachiko , Imada Toshihiro , Nakamura Shigeru , Kubota Shunsuke , Watanabe Mitsuhiro , Takemura Ryo , Tsubota Kazuo 
Published: March 2021

AbstractThe incidence of dry eye disease is increasing worldwide because of the aging population and increasing use of information technology. Dry eye disease manifests as tear-layer instability and inflammation caused by osmotic hypersensitization in tear fluids; however, to our knowledge, no agent that treats both pathologies simultaneously is available. Molecular hydrogen (H2) is known to be effective against various diseases; therefore, we aimed to elucidate the effects of H2 on tear dynamics and the treatment of dry eye disease. We revealed that administering a persistent H2-generating supplement increased the human exhaled H2 concentration (p < 0.01) and improved tear stability (p < 0.01) and dry eye symptoms (p < 0.05) significantly. Furthermore, H2 significantly increased tear secretion in healthy mice (p < 0.05) and significantly suppressed tear reduction in a murine dry eye model (p = 0.007). H2 significantly and safely improved tear stability and dry eye symptoms in a small exploratory group of 10 human subjects, a subset of whom reported dry eye symptoms prior to treatment. Furthermore, it increased tear secretion rapidly in normal mice. Therefore, H2 may be a safe and effective new treatment for dry eye disease and thus larger trials are warranted.
Study of interaction of metal ions with methylthymol blue by chemometrics and quantum chemical calculations
Authors: Rasouli Zolaikha , Irani Mehdi , Jafari Sonia , Ghavami Raouf 
Published: March 2021

AbstractIn this study, we determine the acidity constants of methylthymol blue (MTB) and association constants of its complexes with the ZnII, CuII, and FeII metal ions (MIs), through theoretical and experimental means. The complexes were characterized using UV–Visible absorption spectroscopy combined with soft/hard chemometrics methods and quantum chemical calculations. Quantum chemical calculations revealed that electronic transitions in the UV–Visible spectra of MTB have mixed n → π* and π → π* characters. The results of molar ratio and multivariate curve resolution alternating least squares (MCR-ALS) revealed the formation of successive 1:2 and 1:1 complexes (MI:MTB) for the ZnII and CuII systems. However, the formation of successive 1:1 and 2:1 complexes are suggested for FeII by the molar ratio and MCR-ALS. The majority of transitions observed in the UV–Visible spectra of the Zn(MTB) and Cu(MTB) complexes have ligand-to-ligand charge transfer (LLCT) characters. However, the transitions in the UV–Visible spectrum of the Fe(MTB) complex have LLCT and metal-to-ligand charge transfer (MLCT) characters. For the Fe2(MTB) complex, the lowest energy transition of has an LLCT character. However, its higher energy transitions are a mixture of LLCT, MLCT, and metal-to-metal charge transfer (MMCT) characters. The correlation between experimental and computed wavelengths revealed that the 1:1 complexes of ZnII and CuII prefer square pyramidal geometries. However, the FeII complexes always show octahedral geometry.