bluuebunny/crossref_metadata_2025_split huggingface dataset:
Photocrosslinking and photopatterning of magneto-optical nanocomposite sol–gel thin film under deep-UV irradiation
Authors: Bidaud C. , Berling D. , Jamon D. , Gamet E. , Neveu S. , Royer F. , Soppera O. 
Published: March 2021

AbstractThis paper is aimed at investigating the process of photocrosslinking under Deep-UV irradiation of nanocomposite thin films doped with cobalt ferrite magnetic nanoparticles (MNPs). This material is composed of a hybrid sol–gel matrix in which MNP can be introduced with high concentrations up to 20 vol%. Deep-UV (193 nm) is not only interesting for high-resolution patterning but we also show an efficient photopolymerization pathway even in the presence of high concentration of MNPs. In this study, we demonstrate that the photocrosslinking is based on the free radical polymerization of the methacrylate functions of the hybrid precursor. This process is initiated by Titanium-oxo clusters. The impact of the nanoparticles on the photopolymerization kinetic and photopatterning is investigated. We finally show that the photosensitive nanocomposite is suitable to obtain micropatterns with sub-micron resolution, with a simple and versatile process, which opens many opportunities for fabrication of miniaturized magneto-optical devices for photonic applications.
Initiating an epilepsy surgery program with limited resources in Indonesia
Authors: Thohar Arifin Muhamad , Hanaya Ryosuke , Bakhtiar Yuriz , Bintoro Aris Catur , Iida Koji , Kurisu Kaoru , Arita Kazunori , Bunyamin Jacob , Askoro Rofat , Brilliantika Surya Pratama , Khairunnisa Novita Ikbar , Muttaqin Zainal 
Published: March 2021

AbstractTo share the experiences of organizing the epilepsy surgery program in Indonesia. This study was divided into two periods based on the presurgical evaluation method: the first period (1999–2004), when interictal electroencephalogram (EEG) and magnetic resonance imaging (MRI) were used mainly for confirmation, and the second period (2005–2017), when long-term non-invasive and invasive video-EEG was involved in the evaluation. Long-term outcomes were recorded up to December 2019 based on the Engel scale. All 65 surgical recruits in the first period possessed temporal lobe epilepsy (TLE), while 524 patients were treated in the second period. In the first period, 76.8%, 16.1%, and 7.1% of patients with TLE achieved Classes I, II, and III, respectively, and in the second period, 89.4%, 5.5%, and 4.9% achieved Classes I, II, and III, respectively, alongside Class IV, at 0.3%. The overall median survival times for patients with focal impaired awareness seizures (FIAS), focal to bilateral tonic–clonic seizures and generalized tonic–clonic seizures were 9, 11 and 11 years (95% CI: 8.170–9.830, 10.170–11.830, and 7.265–14.735), respectively, with p = 0.04. The utilization of stringent and selective criteria to reserve surgeries is important for a successful epilepsy program with limited resources.
Variability of the nutrient stream near Kuroshio's origin
Authors: Chen Chen-Tung Arthur , Huang Ting-Hsuan , Wu Chi-Hsuan , Yang Haiyan , Guo Xinyu 
Published: March 2021

AbstractThe Kuroshio—literally “the Black Stream”—is the most substantial current in the Pacific Ocean. It was called the Black Stream because this oligotrophic current is so nutrient-poor in its euphotic zone that the water appears black without the influence of phytoplankton and the associated, often colored dissolved organic matter. Yet, below the euphotic layer, nutrient concentrations increase with depth while current speed declines. Consequently, a core of maximum nutrient flux, the so-called nutrient stream, develops at a depth of roughly between 200 and 800 m. This poorly studied nutrient stream transports nutrients to and supports high productivity and fisheries on the East China Sea continental shelf; it also transports nutrients to and promotes increased productivity and fisheries in the Kuroshio Extension and the subarctic Pacific Ocean. Three modes of the Kuroshio nutrient stream are detected off SE Taiwan for the first time: one has a single-core; one has two cores that are apparently separated by the ridge at 120.6–122° E, and one has two cores that are separated by a southward flow above the ridge. More importantly, northward nutrient transports seem to have been increasing since 2015 as a result of a 30% increase in subsurface water transport, which began in 2013. Such a nutrient stream supports the Kuroshio's high productivity, such as on the East China Sea continental shelf and in the Kuroshio Extension SE of Japan.
The role of volcanic-derived clays in the preservation of Ediacaran biota from the Itajaí Basin (ca. 563 Ma, Brazil)
Authors: Becker-Kerber Bruno , El Albani Abderrazak , Konhauser Kurt , Abd Elmola Ahmed , Fontaine Claude , Paim Paulo S. G. , Mazurier Arnaud , Prado Gustavo M. E. M. , Galante Douglas , Kerber Pedro B. , da Rosa Ana L. Z. , Fairchild Thomas R. , Meunier Alain , Pacheco Mírian L. A. F. 
Published: March 2021

AbstractThe early evolution of metazoans has been reconstructed by studies on exceptionally preserved molds in siliciclastic rocks from the Ediacaran Period. However, there remains considerable controversy regarding the formation mechanisms of this unusual ‘Ediacaran-style’ preservation. Proposed hypotheses usually include early authigenesis of minerals, but evidence for this is scarce. In a recently discovered deposit of Ediacaran biota in Brazil, we show that the classic moldic preservation is related to clay mineral authigenesis. Specifically, these clays originated from the alteration of original pyroclastic sediments, likely enhanced by microbial activity, leading to early illitization and morphological templating of the fossiliferous surfaces at a micrometric scale. Such high-fidelity preservation was made possible by rapid burial during volcanic events and the in-situ templating of tissue by clays via microbially-mediated mineralization. This newly described Lagerstätte demonstrates that a number of minerals can facilitate preservation, and that perhaps ‘Ediacaran-style’ preservation result from different processes leading to the same broad style of preservation.
Mycobacterium abscessus biofilms have viscoelastic properties which may contribute to their recalcitrance in chronic pulmonary infections
Authors: Gloag Erin S. , Wozniak Daniel J. , Stoodley Paul , Hall-Stoodley Luanne 
Published: March 2021

AbstractMycobacterium abscessus is emerging as a cause of recalcitrant chronic pulmonary infections, particularly in people with cystic fibrosis (CF). Biofilm formation has been implicated in the pathology of this organism, however the role of biofilm formation in infection is unclear. Two colony-variants of M. abscessus are routinely isolated from CF samples, smooth (MaSm) and rough (MaRg). These two variants display distinct colony morphologies due to the presence (MaSm) or absence (MaRg) of cell wall glycopeptidolipids (GPLs). We hypothesized that MaSm and MaRg variant biofilms might have different mechanical properties. To test this hypothesis, we performed uniaxial mechanical indentation, and shear rheometry on MaSm and MaRg colony-biofilms. We identified that MaRg biofilms were significantly stiffer than MaSm under a normal force, while MaSm biofilms were more pliant compared to MaRg, under both normal and shear forces. Furthermore, using theoretical indices of mucociliary and cough clearance, we identified that M. abscessus biofilms may be more resistant to mechanical forms of clearance from the lung, compared to another common pulmonary pathogen, Pseudomonas aeruginosa. Thus, the mechanical properties of M. abscessus biofilms may contribute to the persistent nature of pulmonary infections caused by this organism.
Network structure-based decorated CPA@CuO hybrid nanocomposite for methyl orange environmental remediation
Authors: Katowah Dina F. , Saleh Sayed M. , Alqarni Sara A. , Ali Reham , Mohammed Gharam I. , Hussein Mahmoud A. 
Published: March 2021

AbstractA unique network core–shell hybrid design-based cross-linked polyaniline (CPA), which was coated with CuO nanoparticles (NPs) and decorated with nitrogen-doped SWCNT/GO/cellulose N-SWCNTS-GO-CE, has been fabricated using the oxidative polymerization technique. This hybrid nanocomposite shows excellent photocatalytic degradation and an acceptable adsorption capability for Methyl Orange (MO) dye in aqueous solutions with a very slight effect for the N-SWCNTS-GO-CE CuO component. The prepared nanocomposites were used for the removal of a carcinogenic and noxious dye, Methyl Orange, from aqueous samples under various adsorption conditions. Approximately 100% degradation of 10 mg/L of Methylene orange dye was observed within 100 min at pH 6.0 using 50 mg/L CPA/N-SWCNTS-GO-CE/CuO nanocomposite under UV radiation. Additionally, significant factors were investigated on the degradation process including the contact time, MO initial concentration (Ci), solution pH, and dosage of the CuO nanocomposite. All investigated experiments were performed under UV radiation, which provided significant data for the MO degradation process. Furthermore, the recovery of the nanocomposite was studied based on the photocatalytic process efficiency. The obtained data provide the high opportunity of reusing CPA/N-SWCNTS-GO-CE/CuO nanocomposite for numerous photocatalytic processes. The CPA/N-SWCNTS-GO-CE/CuO nanocomposite was prepared via chemical oxidative copolymerization of polyaniline (PANI) with p-phenylenediamine (PPDA) and triphenylamine (TPA) in the presence of N-SWCNTS-GO-CE and CuO NPs. The morphology, structure and thermal properties of the CPA/N-SWCNTS-GO-CE/CuO nanocomposite were investigated using various techniques, including FTIR, XRD, RAMAN, SEM, MAP, EDX, TEM, TGA and DTG. Therefore, CPA/N-SWCNTS-GO-CE/CuO nanocomposite can be effectively used as a convenient and reusable adsorbent to remove hazardous dye from wastewater.
Reduced expression of innate immunity-related genes in lymph node metastases of luminal breast cancer patients
Authors: Popeda Marta , Markiewicz Aleksandra , Stokowy Tomasz , Szade Jolanta , Niemira Magdalena , Kretowski Adam , Bednarz-Knoll Natalia , Zaczek Anna J. 
Published: March 2021

AbstractImmune system plays a dual role in cancer by either targeting or supporting neoplastic cells at various stages of disease, including metastasis. Yet, the exact immune-related transcriptome profiles of primary tumours (PT) and lymph node metastases (LNM) and their evolution during luminal breast cancer (BCa) dissemination remain undiscovered. In order to identify the immune-related transcriptome changes that accompany lymphatic spread, we analysed PT-LNM pairs of luminal BCa using NanoString technology. Decrease in complement C3—one of the top-downregulated genes, in LNM was validated at the protein level using immunohistochemistry. Thirty-three of 360 analysed genes were downregulated (9%), whereas only 3 (0.8%) upregulated in LNM when compared to the corresponding PT. In LNM, reduced expression was observed in genes related to innate immunity, particularly to the complement system (C1QB,C1S,C1R,C4B,CFB,C3,SERPING1andC3AR1). In validation cohort, complement C3 protein was less frequently expressed in LNM than in PT and it was associated with worse prognosis. To conclude, local expression of the complement system components declines during lymphatic spread of non-metastatic luminal BCa, whilst further reduction of tumoral complement C3 in LNM is indicative for poor survival. This points to context-dependent role of complement C3 in BCa dissemination.
Human molecular evolutionary rate, time dependency and transient polymorphism effects viewed through ancient and modern mitochondrial DNA genomes
Authors: Cabrera Vicente M. 
Published: March 2021

AbstractHuman evolutionary genetics gives a chronological framework to interpret the human history. It is based on the molecular clock hypothesis that suppose a straightforward relationship between the mutation rate and the substitution rate with independence of other factors as demography dynamics. Analyzing ancient and modern human complete mitochondrial genomes we show here that, along the time, the substitution rate can be significantly slower or faster than the average germline mutation rate confirming a time dependence effect mainly attributable to changes in the effective population size of the human populations, with an exponential growth in recent times. We also detect that transient polymorphisms play a slowdown role in the evolutionary rate deduced from haplogroup intraspecific trees. Finally, we propose the use of the most divergent lineages within haplogroups as a practical approach to correct these molecular clock mismatches.
Short and long term exposure to air pollution increases the risk of ischemic heart disease
Authors: Kim So Young , Kim Sang Hoon , Wee Jee Hye , Min Chanyang , Han Sang-Min , Kim Seungdo , Choi Hyo Geun 
Published: March 2021

AbstractPrevious studies have suggested an increased risk of ischemic heart disease related to air pollution. This study aimed to explore both the short-term and long-term effects of air pollutants on the risk of ischemic heart disease after adjusting for meteorological factors. The Korean National Health Insurance Service-Health Screening Cohort from 2002 to 2013 was used. Overall, 2155 participants with ischemic heart disease and 8620 control participants were analyzed. The meteorological data and air pollution data, including SO2 (ppm), NO2 (ppm), O3 (ppm), CO (ppm), and particulate matter (PM)10 (μg/m3), were analyzed using conditional logistic regression. Subgroup analyses were performed according to age, sex, income, and region of residence. One-month exposure to SO2 was related to 1.36-fold higher odds for ischemic heart disease (95% confidence interval [95% CI] 1.06–1.75). One-year exposure to SO2, O3, and PM10 was associated with 1.58- (95% CI 1.01–2.47), 1.53- (95% CI 1.27–1.84), and 1.14 (95% CI 1.02–1.26)-fold higher odds for ischemic heart disease. In subgroup analyses, the ≥ 60-year-old group, men, individuals with low income, and urban groups demonstrated higher odds associated with 1-month exposure to SO2. Short-term exposure to SO2 and long-term exposure to SO2, O3, and PM10 were related to ischemic heart disease.
Theory of a frequency-dependent beam splitter in the form of coupled waveguides
Authors: Makarov Dmitry N. 
Published: March 2021

AbstractIt is known that the beam splitter in the form of coupled waveguides (BS) is one of the main devices used in quantum optics and quantum technologies. A BS has two independent parameters: one is the reflection coefficient R or the transmission coefficient T, where $$R+T=1$$

R
+
T
=
1

; the second is the phase shift $$\phi $$
ϕ
. In various applications of quantum optics, these coefficients are considered constant. This is due to the fact that the frequency dependence of these coefficients is usually not taken into account, or this dependence is such that it cannot affect the constancy of these coefficients. It is shown that the coefficients R, T and phase shift $$\phi $$
ϕ
are generally values that depend on the frequencies of incoming photons, the interaction time of photons in the BS, and the type of BS. It is established that in general, R, T and $$\phi $$
ϕ
cannot be considered constant coefficients, and the criteria for when they can be considered constant are defined. The results obtained must be taken into account when analyzing and planning experiments where the beam splitter is presented in the form of coupled waveguides.
Comprehensive metabolomic study of the response of HK-2 cells to hyperglycemic hypoxic diabetic-like milieu
Authors: Valdés Alberto , Lucio-Cazaña Francisco J. , Castro-Puyana María , García-Pastor Coral , Fiehn Oliver , Marina María Luisa 
Published: March 2021

AbstractDiabetic nephropathy (DN) is the leading cause of chronic kidney disease. Although hyperglycaemia has been determined as the most important risk factor, hypoxia also plays a relevant role in the development of this disease. In this work, a comprehensive metabolomic study of the response of HK-2 cells, a human cell line derived from normal proximal tubular epithelial cells, to hyperglycemic, hypoxic diabetic-like milieu has been performed. Cells simultaneously exposed to high glucose (25 mM) and hypoxia (1% O2) were compared to cells in control conditions (5.5 mM glucose/18.6% O2) at 48 h. The combination of advanced metabolomic platforms (GC-TOF MS, HILIC- and CSH-QExactive MS/MS), freely available metabolite annotation tools, novel databases and libraries, and stringent cut-off filters allowed the annotation of 733 metabolites intracellularly and 290 compounds in the extracellular medium. Advanced bioinformatics and statistical tools demonstrated that several pathways were significantly altered, including carbohydrate and pentose phosphate pathways, as well as arginine and proline metabolism. Other affected metabolites were found in purine and lipid metabolism, the protection against the osmotic stress and the prevention of the activation of the β-oxidation pathway. Overall, the effects of the combined exposure of HK-cells to high glucose and hypoxia are reasonably compatible with previous in vivo works.
Psychometric properties of the embodiment scale for the rubber hand illusion and its relation with individual differences
Authors: Romano Daniele , Maravita Angelo , Perugini Marco 
Published: March 2021

AbstractThe Rubber Hand Illusion (RHI) opened the investigation of the sense of body ownership in healthy people. By putting in slight contrast vision touch and proprioception, healthy people embody a fake hand in one's body representation. The easiness of the procedure, typically measured with a set of questions that capture the subjective experience, favoured its blooming. However, validation studies of embodiment questionnaires are lacking, and the individual differences that contribute to the embodiment received little attention. In our study, 298 participants underwent an RHI procedure following both synchronous and asynchronous (control) visuo-tactile stimulations. The study had multiple aims: (a) to explore the psychometric structure of a 27-items questionnaire largely used in the literature; (b) to build a psychometrically efficient scale to measure embodiment-related phenomena; (c) to explore whether and how individual differences (empathy, self-esteem and mindfulness) are associated with the experience of illusion. We found a relatively simple structure consisting of three components: embodiment of the rubber hand, disembodiment of the biological hand, physical sensations experienced during the procedure. The scales designed were psychometrically reliable and theoretically meaningful, encompassing 18 of the original items. Finally, by adopting a network analysis approach, we found that the embodiment is directly related to empathy and self-esteem, while disembodiment and physical sensation are unrelated to individual personality traits. The study provides substantial evidence to use the embodiment scale as a standard questionnaire for future RHI studies. Additionally, the correlations with personality traits suggest that the embodiment induced by the RHI deeply integrates with the complexity of the individuals and their differences.
Structure-controlled asperities of the 1920 Haiyuan M8.5 and 1927 Gulang M8 earthquakes, NE Tibet, China, revealed by high-resolution seismic tomography
Authors: Sun Quan , Pei Shunping , Cui Zhongxiong , Chen Yongshun John , Liu Yanbing , Xue Xiaotian , Li Jiawei , Li Lei , Zuo Hong 
Published: March 2021

AbstractDetailed crustal structure of large earthquake source regions is of great significance for understanding the earthquake generation mechanism. Numerous large earthquakes have occurred in the NE Tibetan Plateau, including the 1920 Haiyuan M8.5 and 1927 Gulang M8 earthquakes. In this paper, we obtained a high-resolution three-dimensional crustal velocity model around the source regions of these two large earthquakes using an improved double-difference seismic tomography method. High-velocity anomalies encompassing the seismogenic faults are observed to extend to depths of 15 km, suggesting the asperity (high-velocity area) plays an important role in the preparation process of large earthquakes. Asperities are strong in mechanical strength and could accumulate tectonic stress more easily in long frictional locking periods, large earthquakes are therefore prone to generate in these areas. If the close relationship between the aperity and high-velocity bodies is valid for most of the large earthquakes, it can be used to predict potential large earthquakes and estimate the seismogenic capability of faults in light of structure studies.
Effect of intravitreal ranibizumab and aflibercept injections on retinal nerve fiber layer thickness
Authors: Ahn Jayoung , Jang Kyuhwan , Sohn Joonhong , Park Ji In , Hwang Daniel Duck-Jin 
Published: March 2021

AbstractThe purpose is to evaluate the effects of multiple intravitreal ranibizumab (IVR) and aflibercept (IVA) injections on peripapillary retinal nerve fiber layer (RNFL) thickness in patients with exudative age-related macular degeneration (AMD). This retrospective, observational, consecutive case series study enrolled patients newly diagnosed with monocular exudative AMD from January 2014 to October 2019 who were administered IVR or IVA injections. Normal fellow eyes were included as controls. Medical records and spectral domain optical coherence tomography results were reviewed at baseline and at 3, 6, and 12 months after injection. No statistically significant differences in peripapillary RNFL thickness and intraocular pressure were observed between the treated and fellow eyes in the two groups. The global RNFL thicknesses for the treated eyes decreased significantly after 12 months compared with baseline, but no significant difference was observed in any of the six examined sectors (temporal, superior temporal, superior nasal, nasal, inferior nasal, and inferior temporal). At 12 months, the central macular thickness of the treated eyes decreased significantly. Multiple IVR and IVA injections are apparently safe considering peripapillary RNFL damage in patients with exudative AMD. The decreased RNFL thickness of the global sector was presumably due to anatomical improvement of macular lesions.
Re-recognizing micro locations of nanoscale zero-valent iron in biochar using C-TEM technique
Authors: Yang Kun , Xu Jialu , Zhang Ming , Lin Daohui 
Published: March 2021

AbstractBiochar supported nanoscale zero-valent iron (NZVI/BC), prepared commonly by liquid reduction using sodium borohydride (NaBH4), exhibits better reduction performance for contaminants than bare NZVI. The better reducing ability was attributed to attachment of nanoscale zero-valent iron (NZVI) on biochar (BC) surface or into the interior pores of BC particles due to observations by scanning electron microscopy (SEM) and plan transmission electron microscopy (P-TEM) techniques in previous studies. In this study, cross-sectional TEM (C-TEM) technique was employed firstly to explore location of NZVI in NZVI/BC. It was observed that NZVI is isolated from BC particles, but not located on the surface or in the interior pores of BC particles. This observation was also supported by negligible adsorption and precipitation of Fe2+/Fe3+ and iron hydroxides on BC surface or into interior pores of BC particles respectively. Precipitation of Fe2+ and Fe3+, rather than adsorption, is responsible for the removal of Fe2+ and Fe3+ by BC. Moreover, precipitates of iron hydroxides cannot be reduced to NZVI by NaBH4. In addition to SEM or P-TEM, therefore, C-TEM is a potential technique to characterize the interior morphology of NZVI/BC for better understanding the improved reduction performance of contaminants by NZVI/BC than bare NZVI.