bluuebunny/crossref_metadata_2025_split huggingface dataset:
Scalable Fabrication of Organic Single-Crystalline Wafers for Reproducible TFT Arrays
Authors: Kumagai Shohei , Yamamura Akifumi , Makita Tatsuyuki , Tsurumi Junto , Lim Ying Ying , Wakimoto Takahiro , Isahaya Nobuaki , Nozawa Han , Sato Kayoko , Mitani Masato , Okamoto Toshihiro , Watanabe Shun , Takeya Jun 
Published: November 2019

AbstractBuilding on significant developments in materials science and printing technologies, organic semiconductors (OSCs) promise an ideal platform for the production of printed electronic circuits. However, whether their unique solution-processing capability can facilitate the reliable mass manufacture of integrated circuits with reasonable areal coverage, and to what extent mass production of solution-processed electronic devices would allow substantial reductions in manufacturing costs, remain controversial. In the present study, we successfully manufactured a 4-inch (c.a. 100 mm) organic single-crystalline wafer via a simple, one-shot printing technique, on which 1,600 organic transistors were integrated and characterized. Owing to their single-crystalline nature, we were able to verify remarkably high reliability and reproducibility, with mobilities up to 10 cm2 V−1 s−1, a near-zero turn-on voltage, and excellent on-off ratio of approximately 107. This work provides a critical milestone in printed electronics, enabling industry-level manufacturing of OSC devices concomitantly with lowered manufacturing costs.
Deep Neural Network and Monte Carlo Tree Search applied to Fluid-Structure Topology Optimization
Authors: Gaymann Audrey , Montomoli Francesco 
Published: November 2019

AbstractThis paper shows the application of Deep Neural Network algorithms for Fluid-Structure Topology Optimization. The strategy offered is a new concept which can be added to the current process used to study Topology Optimization with Cellular Automata, Adjoint and Level-Set methods. The design space is described by a computational grid where every cell can be in two states: fluid or solid. The system does not require human intervention and learns through an algorithm based on Deep Neural Network and Monte Carlo Tree Search. In this work the objective function for the optimization is an incompressible fluid solver but the overall optimization process is independent from the solver. The test case used is a standard duct with back facing step where the optimizer aims at minimizing the pressure losses between inlet and outlet. The results obtained with the proposed approach are compared to the solution via a classical adjoint topology optimization code.
Computing on actin bundles network
Authors: Adamatzky Andrew , Huber Florian , Schnauß Jörg 
Published: November 2019

AbstractActin filaments are conductive to ionic currents, mechanical and voltage solitons. These travelling localisations can be utilised to generate computing circuits from actin networks. The propagation of localisations on a single actin filament is experimentally unfeasible to control. Therefore, we consider excitation waves propagating on bundles of actin filaments. In computational experiments with a two-dimensional slice of an actin bundle network we show that by using an arbitrary arrangement of electrodes, it is possible to implement two-inputs-one-output circuits.
Effect of low doses of biocides on the antimicrobial resistance and the biofilms of Cronobacter sakazakii and Yersinia enterocolitica
Authors: Capita Rosa , Vicente-Velasco María , Rodríguez-Melcón Cristina , García-Fernández Camino , Carballo Javier , Alonso-Calleja Carlos 
Published: November 2019

AbstractThe susceptibility of Cronobacter sakazakii ATCC 29544 (CS) and Yersinia enterocolitica ATCC 9610 (YE) to sodium hypochlorite (10% of active chlorine; SHY), peracetic acid (39% solution of peracetic acid in acetic acid; PAA) and benzalkonium chloride (BZK) was tested. Minimum inhibitory concentration (MIC) values (planktonic cells; microdilution broth method) of 3,800 ppm (SHY), 1,200 ppm (PAA) and 15 ppm (BZK) for CS, and 2,500 ppm (SHY), 1,275 ppm (PAA) and 20 ppm (BZK) for YE, were found. In some instances, an increase in growth rate was observed in presence of sub-MICs (0.25MIC, 0.50MIC or 0.75MIC) of biocides relative to the samples without biocides. The cultures exhibited an acquired tolerance to biocides and an increase in antibiotic resistance after exposure to sub-MICs of such disinfectants. Strains were able to form strong biofilms on polystyrene after 48 hours (confocal laser scanning microscopy), with average biovolumes in the observation field (14,161 µm2) of 242,201.0 ± 86,570.9 µm3 (CS) and 190,184.5 ± 40,860.3 µm3 (YE). Treatment of biofilms for 10 minutes with disinfectants at 1MIC or 2MIC reduced the biovolume of live cells. PAA (YE) and BZK (CS and YE) at 1MIC did not alter the percentage of dead cells relative to non-exposed biofilms, and their effect of countering biofilm was due principally to the detachment of cells. These results suggest that doses of PAA and BZK close to MICs might lead to the dissemination of live bacteria from biofilms with consequent hazards for public health.
Prominin-1 Modulates Rho/ROCK-Mediated Membrane Morphology and Calcium-Dependent Intracellular Chloride Flux
Authors: Hori Akiko , Nishide Kenji , Yasukuni Yuki , Haga Kei , Kakuta Wataru , Ishikawa Yasuyuki , Hayes Matthew J. , Ohnuma Shin-ichi , Kiyonari Hiroshi , Kimura Kazuhiro , Kondo Toru , Sasai Noriaki 
Published: November 2019

AbstractMembrane morphology is an important structural determinant as it reflects cellular functions. The pentaspan membrane protein Prominin-1 (Prom1/CD133) is known to be localised to protrusions and plays a pivotal role in migration and the determination of cellular morphology; however, the underlying mechanism of its action have been elusive. Here, we performed molecular characterisation of Prom1, focussing primarily on its effects on cell morphology. Overexpression of Prom1 in RPE-1 cells triggers multiple, long, cholesterol-enriched fibres, independently of actin and microtubule polymerisation. A five amino acid stretch located at the carboxyl cytosolic region is essential for fibre formation. The small GTPase Rho and its downstream Rho-associated coiled-coil-containing protein kinase (ROCK) are also essential for this process, and active Rho colocalises with Prom1 at the site of initialisation of fibre formation. In mouse embryonic fibroblast (MEF) cells we show that Prom1 is required for chloride ion efflux induced by calcium ion uptake, and demonstrate that fibre formation is closely associated with chloride efflux activity. Collectively, these findings suggest that Prom1 affects cell morphology and contributes to chloride conductance.
Nanohydroxyapatite Reinforced Chitosan Composite Hydrogel with Tunable Mechanical and Biological Properties for Cartilage Regeneration
Authors: Kumar B. Y. Santosh , Isloor Arun M. , Kumar G. C. Mohan , Inamuddin  , Asiri Abdullah M. 
Published: November 2019

AbstractWith the continuous quest of developing hydrogel for cartilage regeneration with superior mechanobiological properties are still becoming a challenge. Chitosan (CS) hydrogels are the promising implant materials due to an analogous character of the soft tissue; however, their low mechanical strength and durability together with its lack of integrity with surrounding tissues hinder the load-bearing application. This can be solved by developing a composite chitosan hydrogel reinforced with Hydroxyapatite Nanorods (HANr). The objective of this work is to develop and characterize (physically, chemically, mechanically and biologically) the composite hydrogels loaded with different concentration of hydroxyapatite nanorod. The concentration of hydroxyapatite in the composite hydrogel was optimized and it was found that, reinforcement modifies the hydrogel network by promoting the secondary crosslinking. The compression strength could reach 1.62 ± 0.02 MPa with a significant deformation of 32% and exhibits time-dependent, rapid self-recoverable and fatigue resistant behavior based on the cyclic loading-unloading compression test. The storage modulus value can reach nearly 10 kPa which is needed for the proposed application. Besides, composite hydrogels show an excellent antimicrobial activity against Escherichia coli, Staphylococcus aureus bacteria’s and Candida albicans fungi and their cytocompatibility towards L929 mouse fibroblasts provide a potential pathway to developing a composite hydrogel for cartilage regeneration.
Determinants of myocardial function characterized by CMR-derived strain parameters in left ventricular non-compaction cardiomyopathy
Authors: Gastl Mareike , Gotschy Alexander , Polacin Malgorzata , Vishnevskiy Valery , Meyer Dominik , Sokolska Justyna , Tanner Felix C. , Alkadhi Hatem , Kozerke Sebastian , Manka Robert 
Published: November 2019

AbstractClinical presentation of left ventricular non-compaction cardiomyopathy (LVNC) can be heterogeneous from asymptomatic expression to congestive heart failure. Deformation indices assessed by cardiovascular magnetic resonance (CMR) can determine subclinical alterations of myocardial function and have been reported to be more sensitive to functional changes than ejection fraction. The objective of the present study was to investigate the determinants of myocardial deformation indices in patients with LVNC. Twenty patients with LVNC (44.7 ± 14.0 years) and twenty age- and gender-matched controls (49.1 ± 12.4 years) underwent functional CMR imaging using an ECG-triggered steady state-free-precession sequence (SSFP). Deformation indices derived with a feature tracking algorithm were calculated including end-systolic global longitudinal strain (GLS), circumferential strain (GCS), longitudinal and circumferential strain rate (SRll and SRcc). Twist and rotation were determined using an in-house developed post-processing pipeline. Global deformation indices (GLS, GCS, SRll and SRcc) were significantly lower in patients with LVNC compared to healthy controls (all, p < 0.01), especially for midventricular and apical regions. Apical rotation and twist were impaired for LVNC (p = 0.007 and p = 0.012), but basal rotation was preserved. Deformation indices of strain, strain rate and twist correlated well with parameters of the non-compacted myocardium, but not with the total myocardial mass or the thinning of the compacted myocardium, e.g. r = 0.595 between GLS and the non-compacted mass (p < 0.001). In conclusion, CMR deformation indices are reduced in patients with LVNC especially in affected midventricular and apical slices. The impairment of all strain and twist parameters correlates well with the extent of non-compacted myocardium.
Role of indoleamine 2,3-dioxygenase in testicular immune-privilege
Authors: Gualdoni Gisela S. , Jacobo Patricia V. , Sobarzo Cristian M. , Pérez Cecilia V. , Matzkin María E. , Höcht Christian , Frungieri Mónica B. , Hill Marcelo , Anegon Ignacio , Lustig Livia , Guazzone Vanesa A. 
Published: November 2019

AbstractMale meiotic germ cell including the spermatozoa represent a great challenge to the immune system, as they appear long after the establishment of normal immune tolerance mechanisms. The capacity of the testes to tolerate autoantigenic germ cells as well as survival of allogeneic organ engrafted in the testicular interstitium have led to consider the testis an immunologically privileged site. Disruption of this immune privilege following trauma, tumor, or autoimmune orchitis often results in male infertility. Strong evidence indicates that indoleamine 2,3-dioxygenase (IDO) has been implicated in fetal and allograft tolerance, tumor immune resistance, and regulation of autoimmune diseases. IDO and tryptophan 2,3-dioxygenase (TDO) catalyze the same rate-limiting step of tryptophan metabolism along a common pathway, which leads to tryptophan starvation and generation of catabolites collectively known as kynurenines. However, the relevance of tryptophan metabolism in testis pathophysiology has not yet been explored. Here we assessed thein vivorole of IDO/TDO in experimental autoimmune orchitis (EAO), a model of autoimmune testicular inflammation and immunologically impaired spermatogenesis. EAO was induced in adult Wistar rats with testicular homogenate and adjuvants. Control (C) rats injected with saline and adjuvants and normal untreated rats (N) were also studied. mRNA expression of IDO decreased in whole testes and in isolated Sertoli cells during EAO. TDO and IDO localization and level of expression in the testis were analyzed by immunostaining and Western blot. TDO is expressed in granulomas from EAO rats, and similar protein levels were observed in N, C, and EAO groups. IDO was detected in mononuclear and endothelial cells and reduced IDO expression was detected in EAO group compared to N and C rats. This phenomenon was concomitant with a significant reduction of IDO activity in EAO testis measured by tryptophan and kynurenine concentrations (HPLC). Finally,in vivoinhibition of IDO with 1-methyl-tryptophan increased severity of the disease, demonstrating down regulation of IDO-based tolerance when testicular immune regulation was disrupted. We present evidence that an IDO-based mechanism is involved in testicular immune privilege.
Therapeutic effects of methylphenidate for attention-deficit/hyperactivity disorder in children with borderline intellectual functioning or intellectual disability: A systematic review and meta-analysis
Authors: Sun Cheuk-Kwan , Tseng Ping-Tao , Wu Ching-Kuan , Li Dian-Jeng , Chen Tien-Yu , Stubbs Brendon , Carvalho Andre F , Chen Yen-Wen , Lin Pao-Yen , Cheng Yu-Shian , Wu Ming-Kung 
Published: November 2019

AbstractAttention-deficit/hyperactivity disorder (ADHD) frequently co-occurs with intellectual disability in children, and may further compromise learning. Methylphenidate is a first-line treatment for ADHD, however no previous meta-analysis has evaluated its overall efficacy for ADHD in children with comorbid intellectual disability (ID) or borderline intellectual functioning. The PubMed/MEDLINE, Cochrane CENTRAL and ScienceDirect databases were systematically searched from inception through 2018/7/15 for clinical studies that investigated the effects of methylphenidate in children with ADHD and ID. A random-effects model meta-analysis was used for data synthesis. Eight studies (average Jadad score = 2.5) enrolling 242 participants receiving methylphenidate and 181 participants receiving placebo were included. The meta-analysis showed that methylphenidate led to a significant improvement in ADHD symptoms relative to placebo (Hedges’ g = 0.878, p < 0.001). Meta-regression analysis pointed to an association between the dose of methylphenidate and overall improvement in ADHD severity (slope = 1.334, p < 0.001). Finally, there was no significant difference in drop-out rate [odds ratio (OR) = 1.679, p = 0.260] or rate of treatment discontinuation due to adverse events (OR = 4.815, p = 0.053) between subjects receiving methylphenidate and those taking placebos. Our study suggests that methylphenidate retains its efficacy in children with ADHD and borderline intellectual functioning or ID.
Tradeoffs in the value of biodiversity feature and cost data in conservation prioritization
Authors: Rodewald Amanda D. , Strimas-Mackey Matt , Schuster Richard , Arcese Peter 
Published: November 2019

AbstractDecision-support tools are commonly used to maximize return on investments (ROI) in conservation. We evaluated how the relative value of information on biodiversity features and land cost varied with data structure and variability, attributes of focal species and conservation targets, and habitat suitability thresholds for contrasting bird communities in the Pacific Northwest of North America. Specifically, we used spatial distribution maps for 20 bird species, land values, and an integer linear programming model to prioritize land units (1 km2) that met conservation targets at the lowest estimated cost (hereafter ‘efficiency’). Across scenarios, the relative value of biodiversity data increased with conservation targets, as higher thresholds for suitable habitat were applied, and when focal species occurred disproportionately on land of high assessed value. Incorporating land cost generally improved planning efficiency, but at diminishing rates as spatial variance in biodiversity features relative to land cost increased. Our results offer a precise, empirical demonstration of how spatially-optimized planning solutions are influenced by spatial variation in underlying feature layers. We also provide guidance to planners seeking to maximize efficiency in data acquisition and resolve potential trade-offs when setting targets and thresholds in financially-constrained, spatial planning efforts aimed at maximizing ROI in biodiversity conservation.
Analysis of thermochemical energy storage in an elemental configuration
Authors: Malley-Ernewein Alexandre , Lorente Sylvie 
Published: November 2019

AbstractHere we show theoretically that the design of a thermochemical energy storage system for fast response and high thermal power can be predicted in accord with the constructal law of design. In this fundamental configuration, the walls of the elemental cylinder are impregnated with salt, while humid air is blown through the tube. Cases with constant salt volume or constant fluid volume or both are considered. It is shown that the best design in each case meets the equipartition of imperfections principle. The predictions are confirmed by full numerical experiments, allowing to consider various shape ratios and study their impact on the overall performance.
Isotope effects in self-organization of internal transport barrier and concomitant edge confinement degradation in steady-state LHD plasmas
Authors: Kobayashi T. , Takahashi H. , Nagaoka K. , Sasaki M. , Nakata M. , Yokoyama M. , Seki R. , Yoshinuma M. , Ida K. 
Published: November 2019

AbstractThe isotope effect, which has been a long-standing mystery in the turbulent magnetically confined plasmas, is the phenomena that the plasma generated with heavier hydrogen isotope show a mitigated transport. This is on the contrary to what is predicted with the simple scaling theory, in which the heavier ions easily diffuse because of its larger gyro-radius. Thanks to the newly developed analysis method and a comprehensive parameter scan experiment in the steady-state plasmas in the Large Helical Device (LHD), the isotope effect was clearly observed in the self-organized internal transport barrier (ITB) structure for the first time. Comparing the ITB intensity in deuterium (D) and hydrogen (H) plasmas, two distinct hydrogen isotope effects are found: stronger ITB is formed in D plasmas and a significant edge confinement degradation accompanied by the ITB formation emerges in H plasmas. This observation sheds light on a new aspect of the turbulent plasmas regarding how the basic properties of the fluid material affect the turbulent structure formation in the open-system.
The role of cardiac transcription factor NKX2-5 in regulating the human cardiac miRNAome
Authors: Arasaratnam Deevina , Bell Katrina M. , Sim Choon Boon , Koutsis Kathy , Anderson David J. , Qian Elizabeth L. , Stanley Edouard G. , Elefanty Andrew G. , Cheung Michael M. , Oshlack Alicia , White Anthony J. , Abi Khalil Charbel , Hudson James E. , Porrello Enzo R. , Elliott David A. 
Published: November 2019

AbstractMicroRNAs (miRNAs) are translational regulatory molecules with recognised roles in heart development and disease. Therefore, it is important to define the human miRNA expression profile in cardiac progenitors and early-differentiated cardiomyocytes and to determine whether critical cardiac transcription factors such as NKX2-5 regulate miRNA expression. We used an NKX2-5eGFP/w reporter line to isolate both cardiac committed mesoderm and cardiomyocytes. We identified 11 miRNAs that were differentially expressed in NKX2-5 -expressing cardiac mesoderm compared to non-cardiac mesoderm. Subsequent profiling revealed that the canonical myogenic miRNAs including MIR1-1, MIR133A1 and MIR208A were enriched in cardiomyocytes. Strikingly, deletion of NKX2-5 did not result in gross changes in the cardiac miRNA profile, either at committed mesoderm or cardiomyocyte stages. Thus, in early human cardiomyocyte commitment and differentiation, the cardiac myogenic miRNA program is predominantly regulated independently of the highly conserved NKX2-5 -dependant gene regulatory network.
The effect of livestock on the physiological condition of roe deer (Capreolus capreolus) is modulated by habitat quality
Authors: Horcajada-Sánchez Fernando , Escribano-Ávila Gema , Lara-Romero Carlos , Virgós Emilio , Barja Isabel 
Published: November 2019

AbstractFree-range livestock grazing is a widespread human activity that not only modifies natural vegetation but also leads to interactions with wild ungulates. Most commonly, the interactions between cattle and wild ungulates have been studied with a focus on competition for high-quality forage. However, other mechanisms, such as the risk of parasite infection, might better describe this interaction. We aim to determine whether livestock affect roe deer (Capreolus capreolusLinnaeus, 1758) by reducing habitat quality and increasing the probability of infection by shared parasites. We measured noninvasive fecal cortisol metabolites as an indicator of habitat quality as well as the lung nematode larvae burden from theDictyocaulusgenus. A higherDictyocauluslarvae load was found in the presence of livestock in pines, and feces collected in winter had a higher parasite load than feces collected in autumn. Additionally, fecal cortisol metabolite levels in the roe deer were affected by the interaction between habitat quality and livestock presence and were higher in the poorest habitat and when living in sympatry with cattle. Our results suggest that physiological stress responses in roe deer were mediated by the habitat type and the presence of competitors. The long-term implications of altered physiological responses such as those demonstrated here should be considered in management strategies for deer.
The Protein Arginine Methyltransferases 1 and 5 affect Myc properties in glioblastoma stem cells
Authors: Favia Annarita , Salvatori Luisa , Nanni Simona , Iwamoto-Stohl Lisa K. , Valente Sergio , Mai Antonello , Scagnoli Fiorella , Fontanella Rosaria Anna , Totta Pierangela , Nasi Sergio , Illi Barbara 
Published: November 2019

AbstractProtein Arginine (R) methylation is the most common post-translational methylation in mammalian cells. Protein Arginine Methyltransferases (PRMT) 1 and 5 dimethylate their substrates on R residues, asymmetrically and symmetrically, respectively. They are ubiquitously expressed and play fundamental roles in tumour malignancies, including glioblastoma multiforme (GBM) which presents largely deregulated Myc activity. Previously, we demonstrated that PRMT5 associates with Myc in GBM cells, modulating, at least in part, its transcriptional properties. Here we show that Myc/PRMT5 protein complex includes PRMT1, in both HEK293T and glioblastoma stem cells (GSCs). We demonstrate that Myc is both asymmetrically and symmetrically dimethylated by PRMT1 and PRMT5, respectively, and that these modifications differentially regulate its stability. Moreover, we show that the ratio between symmetrically and asymmetrically dimethylated Myc changes in GSCs grown in stem versus differentiating conditions. Finally, both PRMT1 and PRMT5 activity modulate Myc binding at its specific target promoters. To our knowledge, this is the first work reporting R asymmetrical and symmetrical dimethylation as novel Myc post-translational modifications, with different functional properties. This opens a completely unexplored field of investigation in Myc biology and suggests symmetrically dimethylated Myc species as novel diagnostic and prognostic markers and druggable therapeutic targets for GBM.