bluuebunny/crossref_metadata_2025_split huggingface dataset:
Genome Sequence of the Euryhaline Javafish Medaka, Oryzias javanicus: A Small Aquarium Fish Model for Studies on Adaptation to Salinity
Authors: Takehana Yusuke , Zahm Margot , Cabau Cédric , Klopp Christophe , Roques Céline , Bouchez Olivier , Donnadieu Cécile , Barrachina Celia , Journot Laurent , Kawaguchi Mari , Yasumasu Shigeki , Ansai Satoshi , Naruse Kiyoshi , Inoue Koji , Shinzato Chuya , Schartl Manfred , Guiguen Yann , Herpin Amaury 
Published: January 2020

Abstract
The genus Oryzias consists of 35 medaka-fish species each exhibiting various ecological, morphological and physiological peculiarities and adaptations. Beyond of being a comprehensive phylogenetic group for studying intra-genus evolution of several traits like sex determination, behavior, morphology or adaptation through comparative genomic approaches, all medaka species share many advantages of experimental model organisms including small size and short generation time, transparent embryos and genome editing tools for reverse and forward genetic studies. The Java medaka, Oryzias javanicus, is one of the two species of medaka perfectly adapted for living in brackish/sea-waters. Being an important component of the mangrove ecosystem, O. javanicus is also used as a valuable marine test-fish for ecotoxicology studies. Here, we sequenced and assembled the whole genome of O. javanicus, and anticipate this resource will be catalytic for a wide range of comparative genomic, phylogenetic and functional studies. Complementary sequencing approaches including long-read technology and data integration with a genetic map allowed the final assembly of 908 Mbp of the O. javanicus genome. Further analyses estimate that the O. javanicus genome contains 33% of repeat sequences and has a heterozygosity of 0.96%. The achieved draft assembly contains 525 scaffolds with a total length of 809.7 Mbp, a N50 of 6,3 Mbp and a L50 of 37 scaffolds. We identified 21454 predicted transcripts for a total transcriptome size of 57, 146, 583 bps. We provide here a high-quality chromosome scale draft genome assembly of the euryhaline Javafish medaka (321 scaffolds anchored on 24 chromosomes (representing 97.7% of the total bases)), and give emphasis on the evolutionary adaptation to salinity.
A Cell Fate Switch in theCaenorhabditis elegansSeam Cell Lineage Occurs Through Modulation of the Wnt Asymmetry Pathway in Response to Temperature Increase
Authors: Hintze Mark , Koneru Sneha L , Gilbert Sophie P R , Katsanos Dimitris , Lambert Julien , Barkoulas Michalis 
Published: January 2020

AbstractDevelopmental phenotypes are often consistent across individuals within a population in the face of environmental and genetic challenges. However, these challenges can exceed the level of system robustness and change developmental...Populations often display consistent developmental phenotypes across individuals despite inevitable biological stochasticity. Nevertheless, developmental robustness has limits, and systems can fail upon change in the environment or the genetic background. We use here the seam cells, a population of epidermal stem cells in Caenorhabditis elegans, to study the influence of temperature change and genetic variation on cell fate. Seam cell development has mostly been studied so far in the laboratory reference strain (N2), grown at 20° temperature. We demonstrate that an increase in culture temperature to 25° introduces variability in the wild-type seam cell lineage, with a proportion of animals showing an increase in seam cell number. We map this increase to lineage-specific symmetrization events of normally asymmetric cell divisions at the fourth larval stage, leading to the retention of seam cell fate in both daughter cells. Using genetics and single-molecule imaging, we demonstrate that this symmetrization occurs via changes in the Wnt asymmetry pathway, leading to aberrant Wnt target activation in anterior cell daughters. We find that intrinsic differences in the Wnt asymmetry pathway already exist between seam cells at 20° and this may sensitize cells toward a cell fate switch at increased temperature. Finally, we demonstrate that wild isolates of C. elegans display variation in seam cell sensitivity to increased culture temperature, although their average seam cell number is comparable at 20°. Our results highlight how temperature can modulate cell fate decisions in an invertebrate model of stem cell patterning.
The Discovery of Oil And The Urgency of The Dutch Indies Mining Act 1899
Authors: Setiawan Agus 
Published: January 2020

Abstract This article describes the historical background of the passing of the Dutch Indies Mining Act of or the Indische Mijnwet, the factors that led to the passing of the Act, and the obstacles and the responses of some parties to the act. Various factors that influenced the passing of the act were not separated from the changes within the political situation in The Netherlands and in the archipelago itself regarding the relationship between the Dutch and other powers, such as the British and local authorities, as well as the expansion of markets and production that were carried out by American oil companies in Asia. The American oil companies’ efforts to set foot in the Dutch Indies were a threat to the dominance of the oil companies in the Dutch Indies, and the Dutch Indies Mining Act was one legal obstacle for the existence and expansion of American oil companies that sought to dominate oil exploration in the Dutch Indies.---Abstraksi Artikel ini menjelaskan tentang latarbelakang sejarah pemberlakuan Undang-Undang Pertambangan Hindia Belanda Indische Mijnwet, yaitu faktor-faktor penyebab, dan hambatan-hambatan serta respon dari beberapa kelompok terhadap adanya Undang-Undang tersebut. Banyaknya faktor yang mempengaruhi pemberlakuan Undang-Undang tersebut tidak terlepas dari perubahan situasi politik di Belanda dan Indonesia yang masih memiliki keterkaitan hubungan antara Belanda dan para penguasa lainnya, seperti pemerintah Inggris dan pemerintahan setempat serta adanya eskpansi pasar dan produksi yang dibawa oleh perusahaan minyak Amerika di Asia. Adanya usaha-usaha perusahaan minyak Amerika untuk melebarkan sayap ke Hindia Belanda menjadi sebuah ancaman terhadap dominasi perusahaan minyak bagi Hindia Belanda sendiri. Dan Undang-Undang Pertambangan Hindia Belanda merupakan salah satu masalah hukum terhadap keberadaan dan ekpansi perusahaan minyak Amerika yang akan mengeksplorasi minyak di Hindia Belanda.
Translation Accuracy of English Idiomatic Expression into Indonesian in “Big Hero 6” Film Subtitle by Lebah Ganteng
Authors: Iskandar Fitri 
Published: January 2020

Abstract This article discusses about the types of idiomatic expression and the translation accuracy of English idiomatic expression into Indonesian in “Big Hero 6” film subtitle translated by Lebah Ganteng by using qualitative descriptive method. The writer analyses the data by classifying the type of idiomatic expressions based on McCarthy and O’Dell’s theory about the types of idiom, giving explication toward the translation strategy of idiomatic expression that is done by the translator based on Mona Baker’s theory about translation strategy of idiom, and analyzing the translation accuracy of English idiomatic expression translation into Indonesian considering the appropriate of the context of film and related theory about accuracy-rating assessment by Nababan. As the result, the types of idiomatic expression applied in that film are compound, verb +object, prepositional phrase, and whole clause and sentence. The translator seems prefer to use omission of entire idiom, paraphrasing, and using idiom of similar meaning and form strategy in translating idiom expression. ---Abstrak Tulisan ini membahas tentang jenis-jenis ungkapan idiom dan keakurasian terjemahan subtitle idiom dari bahasa Inggris ke dalam bahasa Indonesia dalam film “Big Hero 6” yang diterjemahkan oleh tim Lebah Ganteng dengan menggunakan metode deskriptif. Penulis mengklasifikasi jenis ungkapan idiom berdasrkan teori McCarthy dan O’Dell, mengenai jenis-jenis idiom, dengan memberikan eksplikasi terhadap strategi penerjemahan yang dilakukan berdasarkan teorinya Mona Baker, Strategi Penerjemahan Idiom. Di samping itu penulis juga menganalisis keakurasian penerjemahan ungkapan idiom dari bahasa Inggris ke dalam bahasa Indonesia dengan menggunakan konsep Penilaian Penerjemahan yang diajukan oleh Nababan. Hasil dari pembahasan tentang penerjemahan idiom yang ada dalam film tersebut, penulis menyimpulkan bahwa penerjemah tampaknya lebih sering menggunakan penghilangan idiom, memparafrasa, dan menggunakan kesamaan idiom antara bahasa sumber dan bahasa sasaran. DOI : 10.5281/zenodo.556810
Resistentes, insurgentes e heterotópicos: contribuições da hermenêutica da subjetividade foucaultiana para a práxis e formação docente
Authors: Mantovani José Pascoal 
Published: January 2020

Este trabalho tem como objetivo apresentar as contribuições do filósofo Michel Foucault para a reflexão do fenômeno educacional, especificamente ao que se refere à prática e à formação de professores/as. Como objetivos (i) apresentar como a constituição da subjetividade proposta por Foucault pode ser um instrumental valioso para a hermenêutica do sujeito contemporâneo, especificamente o/a docente que está inserido no centro do fenômeno educacional; (ii) destacar como os conceitos apresentados por Castro resistentes, insurgentes e utópicos auxiliam na análise e crítica do atual cenário educacional e; (iii) propor um viés que tangencie a prática e formação docente sob viés ético e que pondere a complexidade típica do sujeito. A metodologia utilizada é a intersecção entre os textos filosóficos de Foucault em diálogo com as demandas presentes na prática docente, sendo elas: valores pessoais dos docentes e os dilemas vocacionais. Como resultado, aferiu-se que a ação de repensar a subjetividade do sujeito apontou para uma nova dimensão do que é o ato de resistência, insurgência e, sobretudo, a atitude heterotópica que acompanha o horizonte docente. A título conclusivo, destaca-se que a subjetividade do sujeito recebe influência significativa de todas as peculiaridades advindas da educação, de modo a sintonizar o sujeito à um processo normativo estabelecido pela cultura, todavia, como movimento inverso e fluindo paralelamente, a educação pode ser o viés que lança o indivíduo para a essencialidade do si-mesmo.
A revised approach for estimating informally disposed domestic waste in rural versus urban South Africa and implications for waste management
Authors: Rodseth Clare , Notten Philippa , Von Blottniz Harro 
Published: January 2020

A major limitation to improved waste management in South Africa lies in the paucity of reliable waste data and the exclusion of the contribution of the informal sector from reporting. Due to the disparity in the provision of formal waste management services across households in South Africa, omission of the quantified contribution of informal management practices leads to an inaccurate representation of waste management practices in existing waste data repositories. Given the potentially adverse social and environmental consequences of unregulated waste management practices, a lack of representation thereof has the potential to underestimate impacts. As of 2015, 31% of households are reported as lacking a basic refuse removal service; however, this number cannot necessarily be applied directly to waste quantities, given the regional and socio-economic differences that occur in per capita waste generation rates. The total quantity of domestic waste in South Africa and fraction disposed informally are estimated here, taking into account differences in waste generation rates based on income and settlement type. The characterisation and quantification of unregulated waste streams is beneficial in assessing the magnitude of the problem and, where necessary, identifying mitigation action. The results obtained show that 29% (3.67 million tonnes per annum) of domestic waste generated is not collected or treated via formal management options. Of this waste, the majority (85%) is generated in rural areas. The most common waste management option for unserviced households is a private dump. An estimated 94% of households in unserviced rural areas make use of private dumps, while in unserviced urban and metro areas this decreases to 74% and 71% of households, respectively. Illegal dumping is the next most common waste management option for unserviced areas. The proportion of household waste disposed of via illegal dumping ranges from an estimated 5% for unserviced rural households to 27% in metro areas with the balance made up by ‘other’ disposal/treatment options.

Significance:

The proportion of domestic waste that is mismanaged in South Africa is significant and its exclusion from national waste estimates leads to the inaccurate representation of waste management practices in existing waste data repositories. Unregulated waste management practices can have potentially adverse social and environmental consequences, i.e. leakage into the environment, or if burnt, the generation of atmospheric pollutants.
The quantity of mismanaged waste and distribution of this waste between different management options is important for the development of improved National Waste Management Plans.
Cardiac surgery publications in Africa over the last 20 years: A literature review
Authors: Lin Yihan , Till Brian M. , Yi Sojung , Dahm James S. , Taylor Kathryn , Lu Nguyen , Zilla Peter , Bolman Ralph M. 
Published: January 2020

There is a significant burden of surgically correctable cardiovascular disease in Africa. The goal of this research was to review the last 20 years of literature on this topic. A systematic search was performed using PubMed, Embase and African Index Medicus for the period 1996–2016. Publications came from 29 countries, all of different income brackets. Research output increased by 15-fold over the 20-year time period, with the majority of publications authored by local teams (71.4%) compared to visiting (4.9%) and mixed teams (23.7%). Although increasing, clinical reporting on cardiac surgery is still limited. Increased publication of results should be encouraged to better benchmark capacity and improve research capacity.
Significance:

The majority of the cardiovascular publications came from local research teams affiliated with public hospitals which suggests strong local engagement in research and cardiovascular care.
Research output significantly increased and the share of literature from major research contributors has relatively shrunk over the study period, which suggests emerging research capacities from previously underrepresented regions.
A demographic analysis of publications showed that studies were set in countries from all income brackets, with the majority of the studies originating from low-income countries.
There is a need to standardise reporting of surgical outcomes which is dependent on perioperative care and maintenance of high-quality health records.
Over half of the publications lacked evidence of outpatient follow-up or data on postoperative care, which highlights the need to focus on patient outcomes as a metric.
Tourism and poverty in rural South Africa: A revisit
Authors: Toerien Daan 
Published: January 2020

Debates about the value of pro-poor tourism indicated a need to revisit the links between the dynamics of tourism and hospitality enterprises and community poverty in rural South African towns. The numbers of tourism and hospitality enterprises in these towns are related to population numbers by a power law with a sub-linear exponent. The residents of smaller South African towns are more dependent on the tourism and hospitality sector than are the residents of larger towns. Measurement of the enterprise dependency indices (EDIs) of these towns provides a valid measurement of their wealth/poverty states. Their EDIs are directly and negatively associated with the strength of their tourism and hospitality sectors. Communities in towns with more tourist and hospitality enterprises are overall wealthier, and vice versa. This finding contrasts with a previous view about tourism and poverty reduction in South Africa. Debates about the benefits of pro-poor tourism should include information about the impact of tourism on community wealth/poverty. The EDI is a simple, yet powerful, measure to provide poverty information. Expressing the number of tourism and hospitality enterprises per 1000 residents of towns enables comparisons of towns of different population sizes. Based on ideas of the ‘new geography of jobs’, it is clear that tourism is part of what is called the traded sector and results in inflows of external money into local economies. Tourism is a driver of prosperity and a reducer of poverty in South African towns.

Significance:

The application of different quantitative techniques demonstrates enterprise orderliness in the tourism and hospitality sector of towns in semi-arid South Africa.
Smaller towns are particularly dependent on the tourism sector. Analyses indicate that tourism strength decreases overall community poverty.
Leadership provided by individuals and location of towns can contribute to tourism success and poverty reduction.
Community wealth/poverty should form part of the pro-poor tourism debate.
Estrategias cosmopolíticas para la defensa del agua en territorio Mapuche-Huilliche
Authors: Lazo Rojas Massiel Amelia , Avila Garcia Patricia 
Published: January 2020

La significación del agua que organiza las estrategias cosmopolíticas de los territorios mapuche-huilliche, adquiere renovada importancia frente al actual contexto de privatización de los derechos de aprovechamiento de las aguas en Chile.
El caso de la comunidad MapucheHhuilliche de Rupumeica, configura un ejemplo único en Chile de ejercicio político indígena en que se consigue detener por diez años la construcción de un proyecto hidroeléctrico. Para lograrlo la comunidad de Rupumeica ha defendido el agua en nombre de sus mitos, de sus ritos, de los espíritus dueños del territorio en que habitan y de sus antepasados que poblaron ese lugar; así como en nombre de sus títulos de propiedad entregados por el Estado de Chile y del Convenio 169 de la Organización Internacional del Trabajo (OIT), firmado tanto por el Estado Chileno como el de Noruega (Nación a la que pertenece SN Power, empresa que desea construir dicho proyecto).
En el presente artículo se busca expresar el carácter que adquieren los ngen (espíritus dueños), especialmente el ngen-ko (espíritu dueño da água) e chao- ngenechen (unidad base, material-inmaterial) en la articulación de las estrategias cosmopolíticas para reclamar la participación Mapuche-Huilliche en la gestión de su territorio. Tal participación ha permitido impedir la construcción de la presa hidroeléctrica Maqueo, la cual propone desviar 6 ríos e inundar aproximadamente 180 hectáreas de sus territorios ancestralmente habitados, en las riberas del lago Maihue, comunas de Futrono y Río Bueno, en la región de los Ríos (andes austral, sur de Chile). En busca de comprender las estrategias y prácticas cosmopolíticas de protesta presentes en el conflicto, se observa un desacuerdo radical frente a la posibilidad de una apertura ontológica, que reivindica territorialidad, hogar y linaje, frente a las transformaciones territoriales impuestas por el desarrollo económico nacional. En este sentido el desacuerdo que emerge entre aquello que se considera a sí mismo “el todo” (El Estado nación) y la existencia de aquello que lo excede (la cosmopolítica indígena que no deja marcas en la historicidad del Estado nación).
Utilizing Production Sharing Contracts (PSCs) as a Means for the Protection of Indonesia’s Natural Resources
Authors: Disemadi Hari Sutra , Lasmadi Sahuri 
Published: January 2020

Indonesia has the potential to manage natural resources in such a way that social justice, public welfare, and the prosperity of the people is also realized. Contract law is the primary legal umbrella used in efforts to protect natural resources from exploitation. This study uses normative juridical methods that prioritize secondary data as the primary sources. This study shows the form of the legal protection of state assets related to oil and gas management including the government has the right of immunity, the existence of provisions regarding state revenue, state levies, and bonuses and the existence of provisions for contractors to distribute a portion of the production share. Thus, the government uses Production Sharing Contracts (PSC) to enter into oil and gas management agreements with contractors, specifically regarding upstream business activities. The Oil and Gas Law does not elaborate on the meaning of the PSC. Rather, it only states that the PSC is one form of the contracts.
Keywords: Production Sharing Contract, State Control, Protection of Natural Resources.
Leveraging Cloud-Based Analytics in Active Well Defense Projects and Automated Pressure Response Analyses
Authors: Bommer Pete , Iriarte Jessica , Bayne Marc , Cline Colby , Ramirez Alberto , Van Domelen Mary 
Published: January 2020

Abstract
Fracture-driven interactions in horizontal wells are receiving considerable attention due to the costly negative effects on the full field development of unconventional reservoirs. Operators have tested various methods to minimize these interactions. Active well defense (AWD) describes the process of pumping into existing wells while completing new wells in a unit. Detailed evaluations of active well defense projects are cumbersome due to the extremely large volume of data generated from multiple sources, further complicated by the fact that the data are often stored in variable formats. This paper demonstrates that near real-time evaluation of an active well defense project is possible.
Minimization of fracture-driven interactions has been accomplished by a two-fold approach: optimization of the completion design for the new wells and improvements to the active defense process. Building upon previous successful projects (Bommer et al. 2017; Bommer and Bayne 2018), this case study is based upon a new 16-well data set. The workflow developed allows near real-time optimization of the defense process. An improved understanding of the impact of design and execution parameters (rates, pressures, fluids, diverters) on fracture-driven interactions is possible using only the time-series data traditionally gathered during fracturing and well defense operations.
Increasing the number of fracture initiation points along the lateral by maximizing perforation cluster efficiency is the first step toward minimizing fracture-driven interactions. A common tool is the use of dynamic diversion. Operators apply various diversion techniques in multi-stage fracturing to increase cluster efficiency. The ability to assess diverter performance in time-series data is valuable when optimizing fracture operations.
Active well defense is the second step in minimizing fracture-driven interactions (FDI). In this case study legacy wells are defended by pumping treated water into the legacy wells while completing new wells in the unit. FDIs are monitored with high resolution gauges while the pump-in rates into the legacy wells are dynamically adjusted based upon the pressure responses. Post-project evaluations involve multiple time-series data streams containing an extremely large amount of data. The raw data (.CSV files) are collected and analyzed using a cloud-based application optimized for time-series frac data. Combining the frac treatment data from the new well with the legacy well defense data and applying advanced analytics techniques, it is possible to identify trends and quantify the effectiveness of the active well defense process. Finally, well records and historical production data are combined with the treatment data to demonstrate the overall economic benefit of the process.