bluuebunny/crossref_metadata_2025_split huggingface dataset:
Flexible transparent heteroepitaxial conducting oxide with mobility exceeding 100 cm2 V−1 s−1 at room temperature
Authors: Ma Chun-Hao , Chen En-Liang , Lai Yu-Hong , Chen Yi-Cheng , Chang Li , Chu Ying-Hao 
Published: October 2020

AbstractFlexible and transparent applications have become an emerging technology and have shifted to the forefront of materials science research in recent years. Transparent conductive oxide films have been applied for flat panel displays, solar cells, and transparent glass coatings. However, none of them can fulfill the requirements for advanced transparent flexible devices, such as high-frequency applications. Here, we present a promising technique for transparent flexible conducting oxide heteroepitaxial films: the direct fabrication of epitaxial molybdenum-doped indium oxide (IMO) thin films on a transparent flexible muscovite substrate. An n-type epitaxial IMO film is demonstrated with a mobility of 109 cm2 V−1 s−1, a figure of merit of 0.0976 Ω−1, a resistivity of 4.5 × 10−5 Ω cm and an average optical transmittance of 81.8% in the visible regime. This heteroepitaxial system not only exhibits excellent electrical and optical performance but also shows excellent mechanical durability. Our results illustrate that this is an outstanding way to fabricate transparent and flexible conducting elements for the evolution and expansion of next-generation smart devices.
Long-range phase synchronization of high-frequency oscillations in human cortex
Authors: Arnulfo G. , Wang S. H. , Myrov V. , Toselli B. , Hirvonen J. , Fato M. M. , Nobili L. , Cardinale F. , Rubino A. , Zhigalov A. , Palva S. , Palva J. M. 
Published: October 2020

AbstractInter-areal synchronization of neuronal oscillations at frequencies below ~100 Hz is a pervasive feature of neuronal activity and is thought to regulate communication in neuronal circuits. In contrast, faster activities and oscillations have been considered to be largely local-circuit-level phenomena without large-scale synchronization between brain regions. We show, using human intracerebral recordings, that 100–400 Hz high-frequency oscillations (HFOs) may be synchronized between widely distributed brain regions. HFO synchronization expresses individual frequency peaks and exhibits reliable connectivity patterns that show stable community structuring. HFO synchronization is also characterized by a laminar profile opposite to that of lower frequencies. Importantly, HFO synchronization is both transiently enhanced and suppressed in separate frequency bands during a response-inhibition task. These findings show that HFO synchronization constitutes a functionally significant form of neuronal spike-timing relationships in brain activity and thus a mesoscopic indication of neuronal communication per se.
Type III ATP synthase is a symmetry-deviated dimer that induces membrane curvature through tetramerization
Authors: Flygaard Rasmus Kock , Mühleip Alexander , Tobiasson Victor , Amunts Alexey 
Published: October 2020

AbstractMitochondrial ATP synthases form functional homodimers to induce cristae curvature that is a universal property of mitochondria. To expand on the understanding of this fundamental phenomenon, we characterized the unique type III mitochondrial ATP synthase in its dimeric and tetrameric form. The cryo-EM structure of a ciliate ATP synthase dimer reveals an unusual U-shaped assembly of 81 proteins, including a substoichiometrically bound ATPTT2, 40 lipids, and co-factors NAD and CoQ. A single copy of subunit ATPTT2 functions as a membrane anchor for the dimeric inhibitor IF1. Type III specific linker proteins stably tie the ATP synthase monomers in parallel to each other. The intricate dimer architecture is scaffolded by an extended subunit-a that provides a template for both intra- and inter-dimer interactions. The latter results in the formation of tetramer assemblies, the membrane part of which we determined to 3.1 Å resolution. The structure of the type III ATP synthase tetramer and its associated lipids suggests that it is the intact unit propagating the membrane curvature.
Social attraction in Drosophila is regulated by the mushroom body and serotonergic system
Authors: Sun Yuanjie , Qiu Rong , Li Xiaonan , Cheng Yaxin , Gao Shan , Kong Fanchen , Liu Li , Zhu Yan 
Published: October 2020

AbstractSociality is among the most important motivators of human behaviour. However, the neural mechanisms determining levels of sociality are largely unknown, primarily due to a lack of suitable animal models. Here, we report the presence of a surprising degree of general sociality in Drosophila. A newly-developed paradigm to study social approach behaviour in flies reveal that social cues perceive through both vision and olfaction converged in a central brain region, the γ lobe of the mushroom body, which exhibite activation in response to social experience. The activity of these γ neurons control the motivational drive for social interaction. At the molecular level, the serotonergic system is critical for social affinity. These results demonstrate that Drosophila are highly sociable, providing a suitable model system for elucidating the mechanisms underlying the motivation for sociality.
Formation and diversification of a paradigm biosynthetic gene cluster in plants
Authors: Liu Zhenhua , Cheema Jitender , Vigouroux Marielle , Hill Lionel , Reed James , Paajanen Pirita , Yant Levi , Osbourn Anne 
Published: October 2020

AbstractNumerous examples of biosynthetic gene clusters (BGCs), including for compounds of agricultural and medicinal importance, have now been discovered in plant genomes. However, little is known about how these complex traits are assembled and diversified. Here, we examine a large number of variants within and between species for a paradigm BGC (the thalianol cluster), which has evolved recently in a common ancestor of the Arabidopsis genus. Comparisons at the species level reveal differences in BGC organization and involvement of auxiliary genes, resulting in production of species-specific triterpenes. Within species, the thalianol cluster is primarily fixed, showing a low frequency of deleterious haplotypes. We further identify chromosomal inversion as a molecular mechanism that may shuffle more distant genes into the cluster, so enabling cluster compaction. Antagonistic natural selection pressures are likely involved in shaping the occurrence and maintenance of this BGC. Our work sheds light on the birth, life and death of complex genetic and metabolic traits in plants.
Dramatic uneven urbanization of large cities throughout the world in recent decades
Authors: Sun Liqun , Chen Ji , Li Qinglan , Huang Dian 
Published: October 2020

AbstractThe world has experienced dramatic urbanization in recent decades. However, we still lack information about the characteristics of urbanization in large cities throughout the world. After analyzing 841 large cities with built-up areas (BUAs) of over 100 km2 from 2001 to 2018, here we found an uneven distribution of urbanization at different economic levels. On average, large cities in the low-income and lower-middle-income countries had the highest urban population growth, and BUA expansion in the upper-middle-income countries was more than three times that of the high-income countries. Globally, more than 10% of BUAs in 325 large cities showed significant greening (P < 0.05) from 2001 to 2018. In particular, China accounted for 32% of greening BUAs in the 841 large cities, where about 108 million people lived. Our quantitative results provide information for future urban sustainable development, especially for rational urbanization of the developing world.
Brainstem development requires galactosylceramidase and is critical for pathogenesis in a model of Krabbe disease
Authors: Weinstock Nadav I. , Kreher Conlan , Favret Jacob , Nguyen Duc , Bongarzone Ernesto R. , Wrabetz Lawrence , Feltri M. Laura , Shin Daesung 
Published: October 2020

AbstractKrabbe disease (KD) is caused by a deficiency of galactosylceramidase (GALC), which induces demyelination and neurodegeneration due to accumulation of cytotoxic psychosine. Hematopoietic stem cell transplantation (HSCT) improves clinical outcomes in KD patients only if delivered pre-symptomatically. Here, we hypothesize that the restricted temporal efficacy of HSCT reflects a requirement for GALC in early brain development. Using a novel Galc floxed allele, we induce ubiquitous GALC ablation (Galc-iKO) at various postnatal timepoints and identify a critical period of vulnerability to GALC ablation between P4-6 in mice. Early Galc-iKO induction causes a worse KD phenotype, higher psychosine levels in the rodent brainstem and spinal cord, and a significantly shorter life-span of the mice. Intriguingly, GALC expression peaks during this critical developmental period in mice. Further analysis of this mouse model reveals a cell autonomous role for GALC in the development and maturation of immature T-box-brain-1 positive brainstem neurons. These data identify a perinatal developmental period, in which neuronal GALC expression influences brainstem development that is critical for KD pathogenesis.
The seventh pandemic of cholera in Europe revisited by microbial genomics
Authors: Oprea Mihaela , Njamkepo Elisabeth , Cristea Daniela , Zhukova Anna , Clark Clifford G. , Kravetz Anatoly N. , Monakhova Elena , Ciontea Adriana S. , Cojocaru Radu , Rauzier Jean , Damian Maria , Gascuel Olivier , Quilici Marie-Laure , Weill François-Xavier 
Published: October 2020

AbstractIn 1970, the seventh pandemic of cholera (7 P) reached both Africa and Europe. Between 1970 and 2011, several European countries reported cholera outbreaks of a few to more than 2,000 cases. We report here a whole-genome analysis of 1,324 7 P V. cholerae El Tor (7 PET) isolates, including 172 from autochthonous sporadic or outbreak cholera cases occurring between 1970 and 2011 in Europe, providing insight into the spatial and temporal spread of this pathogen across Europe. In this work, we show that the 7 PET lineage was introduced at least eight times into two main regions: Eastern and Southern Europe. Greater recurrence of the disease was observed in Eastern Europe, where it persisted until 2011. It was introduced into this region from Southern Asia, often circulating regionally in the countries bordering the Black Sea, and in the Middle East before reaching Eastern Africa on several occasions. In Southern Europe, the disease was mostly seen in individual countries during the 1970s and was imported from North and West Africa, except in 1994, when cholera was imported into Albania and Italy from the Black Sea region. These results shed light on the geographic course of cholera during the seventh pandemic and highlight the role of humans in its global dissemination.
Dopants fixation of Ruthenium for boosting acidic oxygen evolution stability and activity
Authors: Hao Shaoyun , Liu Min , Pan Junjie , Liu Xiangnan , Tan Xiaoli , Xu Nan , He Yi , Lei Lecheng , Zhang Xingwang 
Published: October 2020

AbstractDesigning highly durable and active electrocatalysts applied in polymer electrolyte membrane (PEM) electrolyzer for the oxygen evolution reaction remains a grand challenge due to the high dissolution of catalysts in acidic electrolyte. Hindering formation of oxygen vacancies by tuning the electronic structure of catalysts to improve the durability and activity in acidic electrolyte was theoretically effective but rarely reported. Herein we demonstrated rationally tuning electronic structure of RuO2 with introducing W and Er, which significantly increased oxygen vacancy formation energy. The representative W0.2Er0.1Ru0.7O2-δ required a super-low overpotential of 168 mV (10 mA cm−2) accompanied with a record stability of 500 h in acidic electrolyte. More remarkably, it could operate steadily for 120 h (100 mA cm−2) in PEM device. Density functional theory calculations revealed co-doping of W and Er tuned electronic structure of RuO2 by charge redistribution, which significantly prohibited formation of soluble Rux>4 and lowered adsorption energies for oxygen intermediates.
Gene expression and functional deficits underlie TREM2-knockout microglia responses in human models of Alzheimer’s disease
Authors: McQuade Amanda , Kang You Jung , Hasselmann Jonathan , Jairaman Amit , Sotelo Alexandra , Coburn Morgan , Shabestari Sepideh Kiani , Chadarevian Jean Paul , Fote Gianna , Tu Christina H. , Danhash Emma , Silva Jorge , Martinez Eric , Cotman Carl , Prieto G. Aleph , Thompson Leslie M. , Steffan Joan S. , Smith Ian , Davtyan Hayk , Cahalan Michael , Cho Hansang , Blurton-Jones Mathew 
Published: October 2020

AbstractThe discovery of TREM2 as a myeloid-specific Alzheimer’s disease (AD) risk gene has accelerated research into the role of microglia in AD. While TREM2 mouse models have provided critical insight, the normal and disease-associated functions of TREM2 in human microglia remain unclear. To examine this question, we profile microglia differentiated from isogenic, CRISPR-modified TREM2-knockout induced pluripotent stem cell (iPSC) lines. By combining transcriptomic and functional analyses with a chimeric AD mouse model, we find that TREM2 deletion reduces microglial survival, impairs phagocytosis of key substrates including APOE, and inhibits SDF-1α/CXCR4-mediated chemotaxis, culminating in an impaired response to beta-amyloid plaques in vivo. Single-cell sequencing of xenotransplanted human microglia further highlights a loss of disease-associated microglial (DAM) responses in human TREM2 knockout microglia that we validate by flow cytometry and immunohistochemistry. Taken together, these studies reveal both conserved and novel aspects of human TREM2 biology that likely play critical roles in the development and progression of AD.
Navigating facilitated regulatory pathways during a disease X pandemic
Authors: Simpson Shmona , Chakrabarti Ajoy , Robinson David , Chirgwin Keith , Lumpkin Murray 
Published: October 2020

AbstractIn 2018, the Bill and Melinda Gates Foundation convened over thirty subject matter experts in clinical development, manufacturing, and regulatory assessment to determine how the development and approval of medical countermeasures could be accelerated in the event of Disease X. Disease X is the result of a presently unknown pathogen with epidemic or pandemic potential. A key opportunity to accelerate the scientific assessment and regulatory approval of medical countermeasures exists within efficient navigation of facilitated regulatory pathways. It was identified that not all stakeholders will be able to skillfully navigate the facilitated pathways offered by the various regulatory agencies during a public health emergency. To democratize this knowledge, we have written an overview of the facilitated approaches which have been developed and refined by Stringent Regulatory Authorities and the World Health Organization for the primary assessment of medical products. We discuss the conditions necessary for use of these approaches, scenarios in which certain pathways may be applicable, and the pros and cons of these approaches. We also address opportunities available to developers in, or developers who wish to access, low-income countries that may have nascent regulatory frameworks.
Metagenomic characterization of bacterial community and antibiotic resistance genes in representative ready-to-eat food in southern China
Authors: Li YiMing , Cao WeiWei , Liang ShuLi , Yamasaki Shinji , Chen Xun , Shi Lei , Ye Lei 
Published: October 2020

AbstractReady-to-eat (RTE) foods have been considered to be reservoirs of antibiotic resistance bacteria, which constitute direct threat to human health, but the potential microbiological risks of RTE foods remain largely unexplored. In this study, the metagenomic approach was employed to characterize the comprehensive profiles of bacterial community and antibiotic resistance gene (ARG) in 18 RTE food samples (8 RTE meat, 7 RTE vegetables and 3 RTE fruit) in southern China. In total, the most abundant phyla in RTE foods were Proteobacteria, Firmicutes, Cyanobacteria, Bacteroidetes and Actinobacteria. 204 ARG subtypes belonging to 18 ARG types were detected with an abundance range between 2.81 × 10−5 and 7.7 × 10−1 copy of ARG per copy of 16S rRNA gene. Multidrug-resistant genes were the most predominant ARG type in the RTE foods. Chloramphenicol, macrolide-lincosamide-streptogramin, multidrug resistance, aminoglycoside, bacitracin, tetracycline and β-lactam resistance genes were dominant, which were also associated with antibiotics used extensively in human medicine or veterinary medicine/promoters. Variation partitioning analysis indicated that the join effect of bacterial community and mobile genetic elements (MGEs) played an important role in the resistome alteration. This study further deepens the comprehensive understanding of antibiotic resistome and the correlations among the antibiotic resistome, microbiota, and MGEs in the RTE foods.
Therapeutic effect of Aegle marmelos fruit extract against DMBA induced breast cancer in rats
Authors: Akhouri Vivek , Kumari Manorma , Kumar Arun 
Published: October 2020

AbstractBreast cancer is among most common form of cancer worldwide. It is also the major cause of death in female cancer patient around the world. Despite various therapeutic measures, it remains associated with high mortality rate. Aegle marmelos (L.) Correa has been extensively used in Indian medicine system Ayurveda, due to its various medicinal properties. However, there are very limited reports regarding its anticancer activity. Thus, the present research work has been aimed to study the anticancer activity of Aegle marmelos fruit extract on 7,12-dimethylbenz(a)anthracene (DMBA) induced breast cancer in rats. Female Charles Foster rats, 55–60 days old weighing around (150 ± 10 g) were used for the study and were induced DMBA (20 mg/mL dissolved in Olive oil) orally. After the development of breast tumors (about 0.5 cm), the rats were treated with Aegle marmelos ethanolic fruit pulp extract (200 mg/kg b.w./day) orally for 5 weeks and then volume of tumor was measured. Aegle marmelos treatment showed significantly reduced mammary tumor volume (P < 0.05), along with significant reduction (P < 0.0001) in the different serum biomarkers such as TNF-α level, serum malondialdehyde (MDA) level and glucose levels. Significant (P < 0.0001) improvement in both, the kidney and liver serum biomarker parameters were also observed after the treatment with Aegle marmelos ethanolic fruit pulp extract. From the entire study, taking everything into account it can be interpreted that Aegle marmelos ethanolic fruit pulp extract possesses anti-proliferative activity by suppressing the progression of breast tumors in rat model. The plant extract also possesses hepato-renal protective effect. Hence, it can be targeted as novel and safe anti-cancer drug against breast cancer.
Application of artificial neural network for predicting the performance of CO2 enhanced oil recovery and storage in residual oil zones
Authors: Vo Thanh Hung , Sugai Yuichi , Sasaki Kyuro 
Published: October 2020

AbstractResidual Oil Zones (ROZs) become potential formations for Carbon Capture, Utilization, and Storage (CCUS). Although the growing attention in ROZs, there is a lack of studies to propose the fast tool for evaluating the performance of a CO2 injection process. In this paper, we introduce the application of artificial neural network (ANN) for predicting the oil recovery and CO2 storage capacity in ROZs. The uncertainties parameters, including the geological factors and well operations, were used for generating the training database. Then, a total of 351 numerical samples were simulated and created the Cumulative oil production, Cumulative CO2 storage, and Cumulative CO2 retained. The results indicated that the developed ANN model had an excellent prediction performance with a high correlation coefficient (R2) was over 0.98 on comparing with objective values, and the total root mean square error of less than 2%. Also, the accuracy and stability of ANN models were validated for five real ROZs in the Permian Basin. The predictive results were an excellent agreement between ANN predictions and field report data. These results indicated that the ANN model could predict the CO2 storage and oil recovery with high accuracy, and it can be applied as a robust tool to determine the feasibility in the early stage of CCUS in ROZs. Finally, the prospective application of the developed ANN model was assessed by optimization CO2-EOR and storage projects. The developed ANN models reduced the computational time for the optimization process in ROZs.
Distribution of genetic diversity reveals colonization patterns and philopatry of the loggerhead sea turtles across geographic scales
Authors: Baltazar-Soares Miguel , Klein Juliana D. , Correia Sandra M. , Reischig Thomas , Taxonera Albert , Roque Silvana Monteiro , Dos Passos Leno , Durão Jandira , Lomba João Pina , Dinis Herculano , Cameron Sahmorie J.K. , Stiebens Victor A. , Eizaguirre Christophe 
Published: October 2020

AbstractUnderstanding the processes that underlie the current distribution of genetic diversity in endangered species is a goal of modern conservation biology. Specifically, the role of colonization and dispersal events throughout a species’ evolutionary history often remains elusive. The loggerhead sea turtle (Caretta caretta) faces multiple conservation challenges due to its migratory nature and philopatric behaviour. Here, using 4207 mtDNA sequences, we analysed the colonisation patterns and distribution of genetic diversity within a major ocean basin (the Atlantic), a regional rookery (Cabo Verde Archipelago) and a local island (Island of Boa Vista, Cabo Verde). Data analysis using hypothesis-driven population genetic models suggests the colonization of the Atlantic has occurred in two distinct waves, each corresponding to a major mtDNA lineage. We propose the oldest lineage entered the basin via the isthmus of Panama and sequentially established aggregations in Brazil, Cabo Verde and in the area of USA and Mexico. The second lineage entered the Atlantic via the Cape of Good Hope, establishing colonies in the Mediterranean Sea, and from then on, re-colonized the already existing rookeries of the Atlantic. At the Cabo Verde level, we reveal an asymmetric gene flow maintaining links across island-specific nesting groups, despite significant genetic structure. This structure stems from female philopatric behaviours, which could further be detected by weak but significant differentiation amongst beaches separated by only a few kilometres on the island of Boa Vista. Exploring biogeographic processes at diverse geographic scales improves our understanding of the complex evolutionary history of highly migratory philopatric species. Unveiling the past facilitates the design of conservation programmes targeting the right management scale to maintain a species’ evolutionary potential.