bluuebunny/crossref_metadata_2025_split huggingface dataset:
Testing the limits of FT-Raman spectroscopy for wine authentication: Cultivar, geographical origin, vintage and terroir effect influence
Authors: Magdas Dana Alina , Cozar Bogdan Ionut , Feher Ioana , Guyon Francois , Dehelean Adriana , Cinta Pinzaru Simona 
Published: December 2019

AbstractFT-Raman spectroscopy represents an environmentally friendly technique, suitable for the analysis of high-water content food matrices, like wines, due to its relatively weak water bending mode in the fingerprint region. Based on metabolomics applied to FT-Raman spectra, this study presents the classifications achieved for a sample set comprising 126 wines, originated from Romania and France, with respect to cultivar, geographical origin and vintage. Cultivar recognition was successfully performed among four varieties (Sauvignon, Riesling, Chardonnay, Pinot Gris) while subtle particularities exiting between the Chardonnay wines, coming from the two countries, because of terroir influences were pointed out. The obtained separations of 100% in both initial and cross-validation procedure for geographical differentiation between the two origin countries, as well as, among the three Romanian areas (Transylvania, Muntenia and Moldova) were also discussed. Apart of this, the limitations and the importance of choosing a meaningful data set, in terms of representativity for each classification criterion, are addressed in the present work.
Deficit in hippocampal ripples does not preclude spatial memory formation in APP/PS1 mice
Authors: Jura Bartosz , Macrez Nathalie , Meyrand Pierre , Bem Tiaza 
Published: December 2019

AbstractGeneral theory of declarative memory formation posits a cortical-hippocampal dialog during which hippocampal ripple oscillations support information transfer and long-term consolidation of hippocampus dependent memories. Brain dementia, as Alzheimer disease (AD), is accompanied by memory loss and inability to form new memories. A large body of work has shown variety of mechanisms acting at cellular and molecular levels which can putatively play an important role in the impairment of memory formation. However, far less is known about changes occurring at the network-level activity patterns that support memory processing. Using freely moving APP/PS1 mice, a model of AD, we undertook a study to unravel the alterations of the activity of hippocampal and cortical circuits during generation of ripples in the transgenic and wild-type mice undergoing encoding and consolidation of spatial information. We report that APP/PS1 animals are able to consolidate spatial memory despite a major deficit of hippocampal ripples occurrence rate and learning dependent dynamics. We propose that these impairments may be compensated by an increase of the occurrence of cortical ripples and reorganization of cortical-hippocampal interaction.
Modulation of metal-insulator transitions of NdNiO3/LaNiO3/NdNiO3 trilayers via thickness control of the LaNiO3 layer
Authors: Nguyen Tai , Hoang Van Hien , Koo Tae-Yeong , Lee Nam-Suk , Kim Heon-Jung 
Published: December 2019

AbstractOver the last few decades, manipulating the metal-insulator (MI) transition in perovskite oxides (ABO3) via an external control parameter has been attempted for practical purposes, but with limited success. The substitution of A-site cations is the most widely used technique to tune the MI transition. However, this method introduces unintended disorder, blurring the intrinsic properties. The present study reports the modulation of MI transitions in [10 nm-NdNiO3/t-LaNiO3/10 nm-NdNiO3/SrTiO3 (100)] trilayers (t = 5, 7, 10, and 20 nm) via the control of the LaNiO3 thickness. Upon an increase in the thickness of the LaNiO3 layer, the MI transition temperature undergoes a systematic decrease, demonstrating that bond disproportionation, the MI, and antiferromagnetic transitions are modulated by the LaNiO3 thickness. Because the bandwidth and the MI transition are determined by the Ni-O-Ni bond angle, this unexpected behavior suggests the transfer of the bond angle from the lower layer into the upper. The bond-angle transfer eventually induces a structural change of the orthorhombic structure of the middle LaNiO3 layer to match the structure of the bottom and the top NdNiO3, as evidenced by transmission electron microscopy. This engineering layer sequence opens a novel pathway to the manipulation of the key properties of oxide nickelates, such as the bond disproportionation, the MI transition, and unconventional antiferromagnetism with no impact of disorder.
Transcriptional study of appetite regulating genes in the brain of zebrafish (Danio rerio) with impaired leptin signalling
Authors: Ahi Ehsan Pashay , Brunel Mathilde , Tsakoumis Emmanouil , Schmitz Monika 
Published: December 2019

AbstractThe hormone leptin is a key regulator of body weight, food intake and metabolism. In mammals, leptin acts as an anorexigen and inhibits food intake centrally by affecting the appetite centres in the hypothalamus. In teleost fish, the regulatory connections between leptin and other appetite-regulating genes are largely unknown. In the present study, we used a zebrafish mutant with a loss of function leptin receptor to investigate brain expression patterns of 12 orexigenic and 24 anorexigenic genes under different feeding conditions (normal feeding, 7-day fasting, 2 and 6-hours refeeding). Expression patterns were compared to wild-type zebrafish, in order to identify leptin-dependent differentially expressed genes under different feeding conditions. We provide evidence that the transcription of certain orexigenic and anorexigenic genes is influenced by leptin signalling in the zebrafish brain. We found that the expression of orexigenic genes was not affected by impaired leptin signalling under normal feeding conditions; however, several orexigenic genes showed increased transcription during fasting and refeeding, including agrp, apln, galr1a and cnr1. This suggests an inhibitory effect of leptin signal on the transcription of these orexigenic genes during short-term fasting and refeeding in functional zebrafish. Most pronounced effects were observed in the group of anorexigenic genes, where the impairment of leptin signalling resulted in reduced gene expression in several genes, including cart family, crhb, gnrh2, mc4r, pomc and spx, in the control group. This suggests a stimulatory effect of leptin signal on the transcription of these anorexigenic genes under normal feeding condition. In addition, we found multiple gain and loss in expression correlations between the appetite-regulating genes, in zebrafish with impaired leptin signal, suggesting the presence of gene regulatory networks downstream of leptin signal in zebrafish brain. The results provide the first evidence for the effects of leptin signal on the transcription of various appetite-regulating genes in zebrafish brain, under different feeding conditions. Altogether, these transcriptional changes suggest an anorexigenic role for leptin signal, which is likely to be mediated through distinct set of appetite-regulating genes under different feeding conditions.
“You are just a disembodied voice really”
Authors: Braun Sabine 
Published: January 2020

Abstract
This contribution is devoted to the voices of users of video remote interpreting (VRI) in a particular setting, namely legal interpreters and police officers. Focusing on an aspect that has received little attention to date, viz. the interpreters’ and legal stakeholders’ perceptions of VRI as a novel configuration in the legal setting, we use the Social Construction of Technology (SCOT) as a theoretical framework to analyse a set of interviews that were conducted with interpreters and police officers after they had completed a simulated VRI session. As a first step, the participants were prompted to compare this simulated experience to their real-life experience to check the degree of reality of the simulated encounters. Next, they were asked to talk about attitudes towards VRI and to reflect on their experience with VRI during the simulation. Among the key outcomes of this investigation is that the two social groups – police officers and interpreters – have different views, but also that there is a considerable degree of variation among the interpreters, indicating a low degree of stabilisation of VRI as a concept and practice among the interpreters.
Radiance-based NIRv as a proxy for GPP of corn and soybean
Authors: Wu Genghong , Guan Kaiyu , Jiang Chongya , Peng Bin , Kimm Hyungsuk , Chen Min , Yang Xi , Wang Sheng , Suyker Andrew E , Bernacchi Carl J , Moore Caitlin E , Zeng Yelu , Berry Joseph A , Cendrero-Mateo M Pilar 
Published: December 2019

Abstract
Substantial uncertainty exists in daily and sub-daily gross primary production (GPP) estimation, which dampens accurate monitoring of the global carbon cycle. Here we find that near-infrared radiance of vegetation (NIRv,Rad), defined as the product of observed NIR radiance and normalized difference vegetation index, can accurately estimate corn and soybean GPP at daily and half-hourly time scales, benchmarked with multi-year tower-based GPP at three sites with different environmental and irrigation conditions. Overall, NIRv,Rad explains 84% and 78% variations of half-hourly GPP for corn and soybean, respectively, outperforming NIR reflectance of vegetation (NIRv,Ref), enhanced vegetation index (EVI), and far-red solar-induced fluorescence (SIF760). The strong linear relationship between NIRv,Rad and absorbed photosynthetically active radiation by green leaves (APARgreen), and that between APARgreen and GPP, explain the good NIRv,Rad-GPP relationship. The NIRv,Rad-GPP relationship is robust and consistent across sites. The scalability and simplicity of NIRv,Rad indicate a great potential to estimate daily or sub-daily GPP from high-resolution and/or long-term satellite remote sensing data.
Nanoscale photovoltage mapping in CZTSe/CuxSe heterostructure by using kelvin probe force microscopy
Authors: Vishwakarma Manoj , Varandani Deepak , Hendrickx Mylene , Hadermann Joke , Mehta B R 
Published: December 2019

Abstract
In the present work, kelvin probe force microscopy (KPFM) technique has been used to study the CZTSe/CuxSe bilayer interface prepared by multi-step deposition and selenization process of metal precursors. Transmission electron microscopy (TEM) confirmed the bilayer configuration of the CZTSe/CuxSe sample. Two configuration modes (surface mode and junction mode) in KPFM have been employed in order to measure the junction voltage under illumination conditions. The results show that CZTSe/CuxSe has small junction voltage of ∼21 mV and the presence of CuxSe secondary phase in the CZTSe grain boundaries changes the workfunction of the local grain boundaries region. The negligible photovoltage difference between grain and grain boundaries in photovoltage image indicates that CuxSe phase deteriorates the higher photovoltage at grain boundaries normally observed in CZTSe based device. These results can be important for understanding the role of secondary phases in CZTSe based junction devices.
Decreased Jagged1 expression in vascular smooth muscle cells delays endothelial regeneration in arteriovenous graft
Authors: Guo Qunying , Huang Fengzhang , Qing Ying , Feng Shaozhen , Xiao Xiaoguang , Wang Yun , Liang Ming , Wang Tao , Mitch William E , Cheng Jizhong 
Published: January 2020

Abstract

Aims
It is well-established that endothelial dysfunction promotes activation of vascular smooth muscle cell (VSMC). Whether decreased accumulation of VSMCs affects endothelial regeneration and functions in arteriovenous graft (AVG) remodelling has not been studied. We sought to identify mechanisms by which the Notch ligand, Jagged1, in VSMCs regulates endothelial cell (EC) functions in AVGs.

Methods and results
AVGs were created in transgenic mice bearing VSMC-specific knockout (KO) or overexpression of Jagged1. VSMC migration, EC regeneration, and its barrier functions as well as AVG remodelling were evaluated. Jagged1 expression was induced in VSMCs of neointima in the AVGs. Jagged1 KO in VSMCs inhibited the accumulation of extracellular matrix as well as VSMC migration. Fewer α-SMA-positive VSMCs were found in AVGs created in VSMC-specific Jagged1 KO mice (VSMCJagged1 KO mice) vs. in WT mice. Decreased VSMCs in AVGs were associated with deterioration of EC functions. In AVGs created in transgenic mice bearing Jagged1 KO in VSMCs exhibited delayed EC regeneration and impaired EC barrier function. Barrier dysfunction of ECs increased inflammatory cell infiltration and dysregulation of AVG remodelling and arterialization. The increased expression of IL-1β in macrophages was associated with expression of adhesion markers in ECs in AVGs created in VSMCJagged1 KO mice. In contrast, AVGs created in mice with overexpression of Jagged1 in VSMCs exhibited improved EC regeneration plus decreased macrophage infiltration. This led to AVG remodelling and arterialization. In co-cultures of ECs and VSMCs, Jagged1 deficiency in VSMCs suppressed N-cadherin and integrin β3 expression in ECs. Inhibition of integrin β3 activation delayed EC spreading and migration. Notably, Jagged1 overexpression in VSMCs or treatment with recombinant Jagged1 stimulated the expression of N-cadherin and integrin β3 in ECs. Jagged1-induced responses were blocked by inhibition of Notch signalling.

Conclusions
Jagged1 expression in VSMCs maintains EC barrier functions and blocks infiltration of macrophages. These responses promote remodelling and arterialization of AVGs.
Treatment compliance of adolescent orthodontic patients with headgear activator and twin-block appliance assessed prospectively using microelectronic wear-time documentation
Authors: Arponen Heidi , Hirvensalo Ritva , Lindgren Veronica , Kiukkonen Anu 
Published: January 2020

Summary

Background
Success of orthodontic removable appliance treatment relies on patient compliance. The aim of this quantitative and qualitative study was to explore the compliance and self-reported experience of adolescents in orthodontic treatment with headgear activator (HGA) or twin-block (TB) appliance.

Materials/methods
The study group comprised 52 adolescents with a mean age of 12.6 (±1.3) years at the start of the treatment. The patients were treated at a free-of-charge public dental clinic. Participants were randomly allocated to two equal groups to be treated with either HGA or TB. Patient compliance was evaluated as appliance wear time and subjective experience. Appliance wear time was recorded with Theramon® microchip, and the self-reported subjective experience using a questionnaire.

Results
In total, 30 patients completed the treatment during the follow-up period. HGA was worn on average 7 hours per day and TB 9 hours per day by those patients, who successfully completed the treatment. During a mean observation period of 13 months (range 7–23 months), the mean actual wear time was 43 per cent less than the advised 12 or 18 hours per day in the whole patient group, and 55 per cent in those patients, who completed the treatment. Compliance level was unrelated to the appliance type.

Limitations
Study assessed a relatively small number of patients.

Conclusions/implications
Adolescent patients wear HGA and TB less than advised. Individual variation in treatment adherence is considerable. Thereby, microelectronic wear-time documentation can be a cost-effective mean of identifying non-compliance.
Arthropods Associated with Mammals. Their Importance as Part of the Richness in a Biosphere Reserve in Mexico
Authors: Guzmán-Cornejo Carmen , Herrera-Mares Angel , Ugalde-Medina Ana , López-Pérez Andrés M , Del Castillo-Martínez Laura , Acosta-Gutiérrez Roxana , Cabrera-Garrido Martín , Morales-Malacara Juan B 
Published: December 2019

AbstractThe Chamela Biological Station (ChBS) is located in the Pacific Coast of Mexico in the State of Jalisco. This represents one of the core areas of the Chamela-Cuixmala Biosphere Reserve, characterized by one of the most threatened ecosystems, the tropical dry forest. Although accumulated knowledge of biological diversity, only few studies have been focused on ectoparasites or ectodytes associated with mammals, only 23 arthropod taxa had been recorded. In order to increase knowledge about arthropods associated with Mexican mammals, the objective of this work was to record the richness of arthropods (mites, ticks, lice, and fleas) associated with small and medium-sized mammals in the ChBS. A total of 81 hosts belonging to four orders, six families and nine species were captured. From these hosts, 4,946 arthropods were recovered: 4,007 mites, 673 ticks, 230 lice, and 36 fleas. Among medium-sized mammals, Nasua narica (L.) and Didelphis virginiana Kerr showed the highest levels of richness, with six arthropod taxa; among rodents, Heteromys pictus (Thomas) had the highest number of associated species (five). Within the 22 arthropod taxa registered in the present work, 12 represent new records for the reserve, and 3 represent new records for Mexico. With this study, the arthropod fauna associated with mammals in the ChBS has been raised to 38 taxa. In terms of biological conservation, knowledge of the species that inhabit natural reserves must be a priority, since this represents the baseline for species protected, not only in Mexico but around the world.
Spatial Risk Distribution of Dengue Based on the Ecological Niche Model of Aedes aegypti (Diptera: Culicidae) in the Central Mexican Highlands
Authors: Ordoñez-Sierra Raymundo , Mastachi-Loza Carlos Alberto , Díaz-Delgado Carlos , Cuervo-Robayo Angela P , Fonseca Ortiz Carlos Roberto , Gómez-Albores Miguel A , Medina Torres Imelda 
Published: December 2019

Abstract
Dengue is the most important viral disease transmitted by mosquitoes, predominantly Aedes (Stegomyia) aegypti (L.) (Diptera:Culicidae). Forty percent of the world’s population is at risk of contracting the disease, and a large area of Mexico presents suitable environmental conditions for the life cycle of Ae. aegypti. In particular, the Central Mexican Highlands have a high population density, increasing the risk of transmission and propagation of dengue. In the present study, the potential distribution of Ae. aegypti was modeled under an ecological niche approach using the maximum entropy technique with the aim of determining the spatial risk distribution of dengue. The final model of five variables (minimum temperature of the coldest month |Bio6|, precipitation of the wettest month |Bio13|, precipitation seasonality |Bio15|, the normalized difference vegetation index (NDVI), and relative humidity) contributed to more than 90% of the model’s performance. The results of the potential distribution model were then compared with the number of dengue cases per locality during the 2009–2015 period considering four suitability of presence categories. Category 4 corresponded with the highest suitability of presence (0.747 to 1) and the greatest risk of dengue (odds ratio [OR] = 103.27; P &lt; 0.001). In conclusion, the present ecological niche model represents an important tool for the monitoring of dengue and the identification of high-risk areas.
Mutational characterization and mapping of the 70S ribosome active site
Authors: d’Aquino Anne E , Azim Tasfia , Aleksashin Nikolay A , Hockenberry Adam J , Krüger Antje , Jewett Michael C 
Published: January 2020

AbstractThe synthetic capability of the Escherichia coli ribosome has attracted efforts to repurpose it for novel functions, such as the synthesis of polymers containing non-natural building blocks. However, efforts to repurpose ribosomes are limited by the lack of complete peptidyl transferase center (PTC) active site mutational analyses to inform design. To address this limitation, we leverage an in vitro ribosome synthesis platform to build and test every possible single nucleotide mutation within the PTC-ring, A-loop and P-loop, 180 total point mutations. These mutant ribosomes were characterized by assessing bulk protein synthesis kinetics, readthrough, assembly, and structure mapping. Despite the highly-conserved nature of the PTC, we found that &gt;85% of the PTC nucleotides possess mutational flexibility. Our work represents a comprehensive single-point mutant characterization and mapping of the 70S ribosome's active site. We anticipate that it will facilitate structure-function relationships within the ribosome and make possible new synthetic biology applications.
Experiments on Cu-isotope fractionation between chlorine-bearing fluid and silicate magma: implications for fluid exsolution and porphyry Cu deposits
Authors: Guo Haihao , Xia Ying , Bai Ruixia , Zhang Xingchao , Huang Fang 
Published: December 2019

Abstract
Hydrothermal fluid is essential for transporting metals in the crust and mantle. To explore the potential of Cu isotopes as a tracer of hydrothermal-fluid activity, Cu-isotope fractionation factors between Cl-bearing aqueous fluids and silicate magmas (andesite, dacite, rhyolite dacite, rhyolite and haplogranite) were experimentally calibrated. Fluids containing 1.75–14 wt.% Cl were mixed together with rock powders in Au95Cu5 alloy capsules, which were equilibrated in cold-seal pressure vessels for 5–13 days at 800–850°C and 2 kbar. The elemental and Cu-isotopic compositions of the recovered aqueous fluid and solid phases were analyzed by (LA-) ICP–MS and multi-collector inductively coupled plasma mass spectrometry, respectively. Our experimental results show that the fluid phases are consistently enriched in heavy Cu isotope (65Cu) relative to the coexisting silicates. The Cu-isotope fractionation factor (Δ65CuFLUID-MELT) ranges from 0.08 ± 0.01‰ to 0.69 ± 0.02‰. The experimental results show that the Cu-isotopic fractionation factors between aqueous fluids and silicates strongly depend on the Cu speciation in the fluids (e.g. CuCl(H2O), CuCl2– and CuCl32−) and silicate melts (CuO1/2), suggesting that the exsolved fluids may have higher δ65Cu than the residual magmas. Our results suggest the elevated δ65Cu values in Cu-enriched rocks could be produced by addition of aqueous fluids exsolved from magmas. Together with previous studies on Cu isotopes in the brine and vapor phases of porphyry deposits, our results are helpful for better understanding Cu-mineralization processes.