bluuebunny/crossref_metadata_2025_split huggingface dataset:
Measuring behavioral and physiological responses to pain mitigation for ovariectomy in Bos taurus yearling beef heifers
Authors: Lauder Jean K , Marti Sonia , Schwartzkopf-Genswein Karen S , Jelinski Murray D , Janzen Eugene D 
Published: December 2019

Abstract
Ovariectomy (spaying) using the trans-vaginal dropped ovary technique (DOT) is performed to prevent pregnancy in cull female beef cattle that are not retained for breeding stock in areas practicing extensive grazing management. There are no reports describing analgesia for this surgical procedure. The objective of this study was to measure behavioral and physiological responses to determine whether an analgesic protocol of BXK [butorphanol (0.01 mg/kg), xylazine (0.02 mg/kg), and ketamine (0.04 mg/kg)] injected intramuscularly (i.m.) before spaying could mitigate procedural and immediate postsurgical pain, and whether oral meloxicam (1 mg/kg) administered at the time of spaying could mitigate postsurgical inflammatory pain. Forty-four red Angus and Angus crossbred yearling heifers (322 ± 27.0 kg BW) were randomly allocated to 1 of 3 groups: PALP (control; palpated but not spayed; n = 14), SPAY (spayed with no analgesia; n = 15), and BXKM (spayed with analgesia; n = 15). Behavioral measurements included visual analog scale (VAS) score, flight speed (FS), stride length (SL), and gait score (GS), as well as activity (lying, standing) and feeding behavior. Physiological measurements included salivary cortisol (SC), haptoglobin (Hp), serum amyloid A (SAA), substance P (SP), complete blood count (CBC), and rectal temperature (RT). Saliva and blood samples were collected, and RT, FS, SL, and GS were measured on day −1, day 0 (time of palpation/spaying), and hours 1, 2, 4, and days 1, 2, 4, and 7 after palpation/spaying. The BXKM heifers had lower SC concentrations than SPAY heifers at 1 h (P = 0.01) and 2 h (P = 0.004). Heifers treated with BXKM had Hp concentrations lower than SPAY heifers at 2 d (P = 0.01), 4 d (P &lt; 0.001), and 7 d (P = 0.008), and lower Hp concentrations than PALP heifers at 4 d (P &lt; 0.001). Concentrations of SAA were greater (P = 0.04) in BXKM heifers than in PALP heifers at 1 h and lower in PALP heifers than in BXKM heifers (P = 0.02) and SPAY heifers (P = 0.05) at 1 d. Heifers in the BXKM group had higher RT than PALP and SPAY heifers at 1 h (P &lt; 0.001) and 2 h (P = 0.004). Results suggest that DOT ovariectomy is acutely stressful and painful and administration of BXK before spaying and meloxicam at the time of spaying mitigated the procedural and postsurgical stress, pain, and inflammation.
Poor maternal nutrition during gestation in sheep alters prenatal muscle growth and development in offspring
Authors: Gauvin Mary C , Pillai Sambhu M , Reed Sarah A , Stevens John R , Hoffman Maria L , Jones Amanda K , Zinn Steven A , Govoni Kristen E 
Published: December 2019

Abstract
Poor maternal nutrition during gestation can have immediate and life-long negative effects on offspring growth and health. In livestock, this leads to reduced product quality and increased costs of production. Based on previous evidence that both restricted- and overfeeding during gestation decrease offspring muscle growth and alter metabolism postnatally, we hypothesized that poor maternal nutrition during gestation would reduce the growth and development of offspring muscle prenatally, reduce the number of myogenic progenitor cells, and result in changes in the global expression of genes involved in prenatal muscle development and function. Ewes were fed a control (100% NRC)-, restricted (60% NRC)-, or overfed (140% NRC) diet beginning on day 30 of gestation until days 45, 90, and 135 of gestation or until parturition. At each time point fetuses and offspring (referred to as CON, RES, and OVER) were euthanized and longissimus dorsi (LM), semitendinosus (STN), and triceps brachii (TB) were collected at each time point for histological and RNA-Seq analysis. In fetuses and offspring, we did not observe an effect of diet on cross-sectional area (CSA), but CSA increased over time (P &lt; 0.05). At day 90, RES and OVER had reduced secondary:primary muscle fiber ratios in LM (P &lt; 0.05), but not in STN and TB. However, in STN and TB percent PAX7-positive cells were decreased compared with CON (P &lt; 0.05). Maternal diet altered LM mRNA expression of 20 genes (7 genes downregulated in OVER and 2 downregulated in RES compared with CON; 5 downregulated in OVER compared with RES; false discovery rate (FDR)-adj. P &lt; 0.05). A diet by time interaction was not observed for any genes in the RNA-Seq analysis; however, 2,205 genes were differentially expressed over time between days 90 and 135 and birth (FDR-adj. P &lt; 0.05). Specifically, consistent with increased protein accretion, changes in muscle function, and increased metabolic activity during myogenesis, changes in genes involved in cell cycle, metabolic processes, and protein synthesis were observed during fetal myogenesis. In conclusion, poor maternal nutrition during gestation contributes to altered offspring muscle growth during early fetal development which persists throughout the fetal stage. Based on muscle-type-specific effects of maternal diet, it is important to evaluate more than one type of muscle to fully elucidate the effects of maternal diet on offspring muscle development.
Geospatial Mapping as a Guide for Resource Allocation Among Burn Centers in India
Authors: Ranganathan Kavitha , Mouch Charles A , Chung Michael , Mathews Ian B , Cederna Paul S , Raja Sabapathy S , Raghavendran Krishnan , Singhal Maneesh 
Published: December 2019

Abstract
Timely treatment is essential for optimal outcomes after burn injury, but the method of resource distribution to ensure access to proper care in developing countries remains unclear. We therefore sought to examine access to burn care and the presence/absence of resources for burn care in India. We surveyed all eligible burn centers (n = 67) in India to evaluate burn care resources at each facility. We then performed a cross-sectional geospatial analysis using geocoding software (ArcGIS 10.3) and publicly available hospital-level data (WorldStreetMap, WorldPop database) to predict the time required to access care at the nearest burn center. Our primary outcome was the time required to reach a burn facility within India. Descriptive statistics were used to present our results. Of the 67 burn centers that completed the survey, 45% were government funded. More than 1 billion (75.1%) Indian citizens live within 2 hours of a burn center, but only 221.9 million (15.9%) live within 2 hours of a burn center with both an intensive care unit (ICU) and a skin bank. Burn units are staffed primarily by plastic surgeons (n = 62, 93%) with an average of 5.8 physicians per unit. Most burn units (n = 53, 79%) have access to hemodialysis. While many Indian citizens live within 2 hours of a burn center, most centers do not offer ICU and skin bank services that are essential for modern burn care. Reallocation of resources to improve transportation and availability of ICU and skin bank services is necessary to improve burn care in India.
The Twin Instrument: Fertility and Human Capital Investment
Authors: Bhalotra Sonia , Clarke Damian 
Published: December 2019

AbstractTwin births are often used as an instrument to address selection of women into fertility. However, recent work shows selection of women into twin birth such that, while OLS estimates tend to be downward biased, twin-IV estimates will tend to be upward biased. This is pertinent given the emerging consensus that fertility has limited impacts on women’s labour supply, or on investments in children. Using data for developing countries and the United States to estimate the trade-off between fertility and children’s human capital, we demonstrate the nature and size of the bias in the twin-IV estimator and estimate bounds on the true parameter.
Evaluation of Novel Trapping Lures for Monitoring Exotic and Native Container-Inhabiting Aedes spp. (Diptera: Culicidae) Mosquitoes
Authors: Eastwood Gillian , Donnellycolt Andrew K , Shepard John J , Misencik Michael J , Bedoukian Robert , Cole Lacey , Armstrong Philip M , Andreadis Theodore G 
Published: December 2019

Abstract
Surveillance for diurnal container-inhabiting mosquitoes such as Aedes albopictus (Skuse), Aedes japonicus japonicus (Theobald), and Aedes triseriatus (Say) have routinely relied on the deployment of multiple trap types, including CO2-baited light traps, gravid traps, oviposition traps, and BG-Sentinel. These trap configurations have met with varying degrees of effectiveness and in many instances likely under-sample these key mosquito vectors. Most recently, the BG-Sentinel trap used in conjunction with the human-scent lure has been largely accepted as the gold-standard for monitoring Ae. albopictus. However, its ability to attract other container-inhabiting Aedes species has not been fully evaluated. During 2018, we tested new scent lures, TrapTech Lure-A and Lure-H (Bedoukian Research, Inc.), using BG-Sentinel traps with CO2 in two regions of Connecticut, Stamford and Hamden, against the BG-Lure. Pooled mosquitoes were additionally screened for arbovirus infection. A total of 47,734 mosquitoes representing 8 genera and 32 species were captured during the study, with the Stamford site deriving on average three times as many mosquitoes per trap, adjusting for sampling effort. Lure-A and Lure-H outperformed the BG-Lure in terms of total numbers, diversity evenness, and the proportion of both Ae. j. japonicus and Ae. triseriatus. There were no significant differences among lures in capturing Ae. albopictus, and in terms of species richness. Fifty-seven isolates of virus (West Nile, Jamestown Canyon, and La Crosse viruses) were obtained during the study, with no significant difference between trap-lure. We highlight both novel lures as effective attractants for use in mosquito surveillance=, which either outperform, or equal, BG-Lure.
A stochastic microscopic approach to the $^{10}{\rm Be}$ and $^{11}{\rm Be}$ nuclei
Authors: Descouvemont Pierre , Itagaki Naoyuki 
Published: December 2019

Abstract
We use a microscopic multicluster model to investigate the structure of $^{10}{\rm Be}$ and of $^{11}{\rm Be}$. These nuclei are described by $\alpha +\alpha+n+n$ and $\alpha +\alpha+n+n+n$ configurations, respectively, within the Generator Coordinate Method (GCM). The 4- and 5-body models raise the problem of a large number of generator coordinates (6 for $^{10}{\rm Be}$ and 9 for $^{11}{\rm Be}$), which requires specific treatment. We address this issue by using the Stochastic Variational Method (SVM), which is based on an optimal choice of the basis functions, generated randomly. The model provides good energy spectra for low-lying states of both nuclei. We also compute rms radii and densities, as well as electromagnetic transition probabilities. We analyze the structure of $^{10}{\rm Be}$ and of $^{11}{\rm Be}$ by considering energy curves, where one of the generator coordinates is fixed during the minimization procedure.
Matrix geometry for ellipsoids
Authors: Matsuura Kaho , Tsuchiya Asato 
Published: December 2019

Abstract
We study description of ellipsoids by matrices to gain insights into emergence of space in matrix models. We apply the coherent state method to the fuzzy ellipsoids and perform the Berezin-Toeplitz quantization for ellipsoids. We see that the manifold described by the coherent state method is an ellipsoid. We find that the Toeplitz operators obtained in the Berezin-Toeplitz quantization agree with the matrices for the fuzzy ellipsoids used in the coherent state method and that the wave functions in the above two methods coincide.
Five-year nitrogen addition affects fine root exudation and its correlation with root respiration in a dominant species, Quercus crispula, of a cool temperate forest, Japan
Authors: Ataka Mioko , Sun Lijuan , Nakaji Tatsuro , Katayama Ayumi , Hiura Tsutom 
Published: December 2019

AbstractIn forest ecosystems, fine root respiration directly contributes to belowground carbon (C) cycling. Exudation from fine roots indirectly affects C cycling via enhanced microbial decomposition of soil organic matter. Although these root-derived C fluxes are essential components of belowground C cycling, how nitrogen (N) addition affects these fluxes and their correlations remains unclear. In this study, fine root exudation, respiration and chemical/morphological traits were measured in a dominant canopy species, Quercus crispula Blume, found in a cool temperate forest, the Tomakomai Experimental Forest, Hokkaido University, which has undergone 5-year N addition. Soil-dissolved organic carbon (DOC) was also measured in both bulk and rhizosphere soils to evaluate the impact of fine root exudation on soil C cycling. Compared with a control plot with no N treatment, fine roots in the N addition plot exhibited larger diameters and higher N concentrations, but lower specific root lengths and areas. On a root-weight basis, respiration was not different between plots, but exudation was slightly higher under N addition. On a root-area basis, exudation was significantly higher in the N addition plot. Additionally, differences in DOC between rhizosphere and bulk soils were two times higher in the N addition plot than the control plot. Although fine root respiration was positively correlated with exudation in both the control and N addition plots, the ratio of exudation C to respiration C decreased after 5-year N addition. Nitrogen addition also affected absolute C allocation to fine root exudation and changed the C allocation strategy between exudation and respiration fluxes. These findings will help enhance predictions of belowground C allocation and C cycling under N-rich conditions in the future.
HeiDI: A model for Pavlovian learning and performance with reciprocal associations
Authors: Honey Robert C. , Dwyer Dominic M. , Iliescu Adela F. 
Published: December 2019

AbstractAssociative treatments of how Pavlovian conditioning affects conditioned behavior are rudimentary: A simple ordinal mapping is held to exist between the strength of an association (V) between a conditioned stimulus (CS) and an unconditioned stimulus (US; i.e., VCS-US) and conditioned behavior in a given experimental preparation. The inadequacy of this simplification is highlighted by recent studies that have taken multiple measures of conditioned behavior: Different measures of conditioned behavior provide the basis for drawing opposite conclusions about VCS-US. Here, we develop a simple model involving reciprocal associations between the CS and US (VCS-USand VUS-CS) that simulates these qualitative individual differences in conditioned behavior. The new model, HeiDI (How excitation and inhibition Determine Ideo-motion), enables a broad range of phenomena to be accommodated, which are either beyond the scope of extant models or require them to appeal to additional (learning) processes. It also provides an impetus for new lines of inquiry and generates novel predictions.
Vglut2 expression in dopamine neurons contributes to post-lesional striatal reinnervation
Authors: Kouwenhoven Willemieke M. , Fortin Guillaume , Penttinen Anna-Maija , Florence Clélia , Delignat-Lavaud Benoît , Bourque Marie-Josée , Trimbuch Thorsten , Luppi Milagros Pereira , Poulin Jean-François , Rosenmund Christian , Awatramani Raj , Trudeau Louis-Éric 
Published: December 2019

ABSTRACTIn Parkinson’s disease, the most vulnerable neurons are found in the ventral tier of the substantia nigra (SN), while the adjacent dopamine (DA) neurons of the ventral tegmental area (VTA) are mostly spared. Although a significant subset of adult VTA DA neurons expressesVglut2, a vesicular glutamate transporter, and release glutamate as a second neurotransmitter in the striatum, only very few adult SN DA neurons have this capacity. Previous work has demonstrated that lesions created by neurotoxins such as MPTP and 6-hydroxydopamine (6-OHDA) can upregulate the expression of Vglut2 in surviving DA neurons. Currently, the molecular mechanisms explaining the plasticity of Vglut2 expression in DA neurons are unknown, as are the physiological consequences for DA neuron function and survival. Here we aimed to characterize the developmental expression pattern of Vglut2 in DA neurons and the role of this transporter in post-lesional plasticity in these neurons. Using an intersectional genetic lineage-mapping approach, based on Vglut2-Cre and TH-Flpo drivers, we first found that more than 98% of DA neurons expressedVglut2at some point in their embryonic development. Expression of this transporter was detectable in most DA neurons until E11.5 and was found to be localized in developing axons. Moderate enhancement of VGLUT2 expression in primary DA neurons caused an increase in axonal arborization length. Compatible with a developmental role, constitutive deletion of Vglut2 caused a regional defect in TH-innervation of the dorsal striatum in E18.5 embryos. Moreover, using anin vitroneurotoxin model, we demonstrate thatVglut2expression can be upregulated in post-lesional DA neurons by 2.5-fold, arguing that the developmental expression ofVglut2in DA neurons can be reactivated at postnatal stages and contribute to post-lesional plasticity of dopaminergic axons. In support of this hypothesis, we find fewer mesostriatial dopaminergic projections in the striatum of conditional Vglut2 KO mice 7 weeks after a neurotoxic lesion, compared to control animals. Thus, we propose here that one of the functions of Vglut2 in adult DA neurons is to promote post-lesional recovery of meso-striatal axons.
Spatiotemporal dynamics of multi-vesicular release is determined by heterogeneity of release sites in central synapses
Authors: Maschi Dario , Klyachko Vitaly A. 
Published: December 2019

SUMMARYSynapses can release multiple vesicles in response to a single action potential. This multi-vesicular release (MVR) occurs at most synapses but its spatiotemporal properties and relation to uni-vesicular release (UVR) are poorly understood. Nanoscale-resolution detection of individual release events in hippocampal boutons revealed a pattern of spatial organization of MVR, which preferentially overlapped with UVR at more central release sites. Pairs of fusion events comprising MVR were also not perfectly synchronized and the earlier event within the pair occurred closer to the active zone (AZ) center. Parallel to this organization, individual release sites had a gradient of release probability extending from the AZ center to periphery. This gradient, and spatial features of MVR, were similarly tightened by buffering intracellular calcium. These observations revealed a heterogeneous landscape of release site properties within individual AZs, which determines the spatiotemporal features of MVR and is controlled by non-uniform calcium elevation across the AZ.
Topographic functional interactions between caudate and cortex are organized by network and degrade with age
Authors: O’Rawe Jonathan F. , Leung Hoi-Chung 
Published: December 2019

AbstractThe striatum is postulated to play a role in gating cortical processing during goal-oriented behavior. However, the underlying circuit structure for striatal gating remains unclear. Deviating from previous approaches which typically treat the striatum as a homogenous structure or small compartments, we took a functional connectivity approach that utilizes the entire anatomical space of the caudate nucleus and examined its functional relationship with the cortex and how that relationship changes with age. We defined the topography of the caudate functional connectivity with the rest of the brain using three publicly available resting-state fMRI data samples. There were several key findings. First, our results revealed two stable gradients of connectivity patterns across the caudate: medial-lateral (M-L) and anterior-posterior (A-P) axes, which supports findings in previous anatomical studies of non-human primates that there is more than one organizational principle. Second, the differential connectivity patterns along the caudate’s M-L gradient were not limited to single structures but rather organized with respect to large-scale neural networks; in particular, networks associated with internal orienting behavior are closely linked to the medial extent of the caudate whereas networks associated with external orienting behavior are closely linked to the lateral extent of the caudate. Third, we found a decrease in the integrity of M-L organization with healthy aging which was associated with age-related changes in behavioral measures of flexible control. In sum, the caudate shows a topographic organization with respect to large-scale networks in the human brain and changes this organization seem to have implications for age-related decline in flexible control of behavior.
Regional astrocyte interferon-γ signaling regulates immunoproteasome-mediated protection during chronic autoimmunity
Authors: Smith Brandon C. , Sinyuk Maksim , Jenkins Julius E. , Psenicka Morgan W. , Williams Jessica L. 
Published: December 2019

AbstractIn early autoimmune neuroinflammation, interferon (IFN)γ and its upregulation of the immunoproteasome (iP) is pathologic. However, during chronic multiple sclerosis (MS), IFNγ has protective properties and, the role of the iP remains to be fully elucidated. Here, we demonstrated that IFNγ signaling in regional astrocytes induces the iP and protects the CNS during autoimmunity. In MS tissue, iP expression was enhanced in spinal cord compared to brainstem lesions, which correlated with a decrease in oxidative stress.In vitro, IFNγ stimulation enhanced iP expression, reduced reactive oxygen species burden, and decreased oxidatively damaged and poly-ubiquitinated protein accumulation preferentially in human spinal cord astrocytes, which was abrogated with the use of the iP inhibitor, ONX 0914. During the chronic phase of an MS animal model, experimental autoimmune encephalomyelitis (EAE), ONX 0914 treatment exacerbated disease and led to increased oxidative stress and poly-ubiquitinated protein build-up. Finally, mice with astrocyte-specific loss of the IFNγ receptor exhibited worsened chronic EAE associated with reduced iP expression, enhanced lesion size and oxidative stress and poly-ubiquitinated protein accumulation in astrocytes. Taken together, our data reveal a protective role for IFNγ in chronic neuroinflammation and identify a novel function of the iP in astrocytes during CNS autoimmunity.
Widespread introgression of theMus musculus musculusY chromosome in Central Europe
Authors: Macholán Miloš , Baird Stuart J. E. , Fornůsková Alena , Martincová Iva , Rubík Pavel , Ďureje Ľudovít , Heitlinger Emanuel , Piálek Jaroslav 
Published: December 2019

AbstractAccording to Haldane’s rule, sex chromosomes should harbour more incompatibilities than autosomes. As a consequence, transmission of sex-linked genes across a genetic barrier is expected to be hampered. A remarkable example of a contradiction of this assumption was reported from the hybrid zone between two house mouse subspecies in western Czechia and south-eastern Germany where unidirectional east→west Y chromosome introgression was observed. Since the phenomenon was coupled with differences in sex ratio, this was hypothesised to be caused by a genetic conflict between sex-specific genes on sex chromosomes or elsewhere in the genome. Here we capitalise on a large material consisting of almost 7500 mice collected across a vast area from the Baltic Sea to the Alps embracing a ~900 km long portion of the zone with the aim to (i) detect its exact course and (ii) reveal the extent and pattern of the Y chromosome introgression in Central Europe. We show that the path of the zone is quite tortuous even at the global scale and the introgression is rather a rule than an exception. We also show that although sex ratio perturbations described in our previous study appear also in other introgression areas, they may not be ubiquitous. Finally, we reveal that although not all Y chromosome types are associated with the introgression, it is not restricted to a single ‘winning’ haplotype.