bluuebunny/crossref_metadata_2025_split huggingface dataset:
lncRNA SNHG14 involved in trophoblast cell proliferation, migration, invasion and epithelial–mesenchymal transition by targeting miR-330-5p in preeclampsia
Authors: Zhang Yulei , Zhang Muling 
Published: November 2020

SummaryPreeclampsia (PE), a pregnancy-specific disease, has become one of the leading causes of maternal and neonatal morbidity and mortality. Pathogenesis of PE has still not been fully addressed and there is a great need to develop early diagnosis markers and effective therapy. This study aimed to determine if lncRNA SNHG14 has a protective effect on placental trophoblast and prevents PE. SNHG14 levels in the peripheral blood from patients with PE or from women with healthy pregnancies were detected using RT-qPCR. The relationship between SNHG14 and miR-330-5p was determined using a dual-luciferase reporter assay. In addition, cell proliferation and cell cycle were evaluated by performing CCK8 assays and flow-cytometric analysis, respectively. Wound-healing and transwell assays were performed to assess cell migration and invasion ability. lncRNA SNHG14 was downregulated in PE patients; it was involved in trophoblast proliferation and regulated cell proliferation during G1/S transition. In addition, lncRNA SNHG14 promoted migration, invasion and epithelial–mesenchymal transition (EMT) in HTR-8/SVneo cells. Luciferase reporter assay indicated that lncRNA SNHG14 served as a molecular sponge for miR-330-5p and negatively regulated miR-330-5p expression in PE. Furthermore, the effects of silenced SNHG14 on trophoblast proliferation, migration, invasion and EMT were reversed by addition of miR-330-5p inhibitor, suggesting that in PE lncRNA SNHG14 functions by competitively binding to miR-330-5p. Taken together, the current study demonstrated that in PE lncRNA SNHG14 is a vital regulator by binding to miR-330-5p. SNHG14 might serve as a therapeutic application in PE progression.
Evaluation of two commercial fungal inoculants for improving phosphorus supply to crops grown in soils with contrasting management histories
Authors: Knight J. Diane 
Published: November 2020

AbstractTwo fungal inoculants are commercially available in Canada and the USA that target improving plant access to soil phosphorus (P). Arbuscular mycorrhizal fungi andPenicillium bilaiaewere used to inoculate wheat, lentil and flax grown in an organically-managed and a conventionally-managed soil. A second crop was grown after freezing the soil to evaluate if the inoculants carried over to a second crop. Crops in the organically managed soil were smaller and took up less P than the same crop in the conventionally managed soil. Inoculation with either inoculant improved shoot growth and P uptake in wheat grown in the organically-managed soil and in lentil grown in the conventionally-managed soil. Co-application of the inoculants was never superior to the single inoculants. Carry-over effects were slight and inconsistent.
Response of seashore paspalum and bermudagrass to topramezone and triclopyr mixtures
Authors: Gonçalves Clebson G. , Brown Austin M. , Basak Suma , McElroy J. Scott 
Published: November 2020

AbstractFew options are available for controlling bermudagrass invasion of seashore paspalum. Bermudagrass and seashore paspalum tolerance to topramezone, triclopyr, or the combination of these two herbicides were evaluated in both greenhouse and field conditions. Field treatments included two sequential applications of topramezone (15.6 g ai ha−1) alone and five rates of topramezone + triclopyr (15.6 + 43.2, 15.6 + 86.3, 15.6 + 172.6, 15.6 + 345.2, or 15.6 g ai ha−1+ 690.4 g ae ha−1). Secondary greenhouse treatments included a single application of topramezone (20.8 g ha−1) or triclopyr (258.9 g ha−1) alone, or in combination at 20.8 + 258.9 or 20.8 + 517.8 g ha−1, respectively. Greenhouse and field results showed that topramezone applications in combination with triclopyr present opposite responses between bermudagrass and seashore paspalum. Topramezone increased bermudagrass injury and decreased seashore paspalum bleaching injury compared to topramezone alone. In field evaluations, topramezone + triclopyr at 15.6 + 690.4 g ha−1used in sequential applications resulted in >90% injury to bermudagrass, however, injury decreased over time. Furthermore, sequential applications of topramezone + triclopyr at 15.6 + 690.4 g ha−1resulted in >50% injury to seashore paspalum. Application programs including topramezone plus triclopyr should increase bermudagrass suppression and reduce seashore paspalum injury compared to topramezone alone. However, additional studies are needed because such practices will likely require manipulation of topramezone rate, application timing, application interval, and number of applications in order to maximize bermudagrass control and minimize seashore paspalum injury.
Hairy buttercup (Ranunculus sardous) and cutleaf evening primrose (Oenothera laciniata) control using halauxifen-methyl based programs in Mississippi and Oklahoma winter wheat
Authors: Ferguson J. Connor , Manuchehri Misha R. , Calhoun Justin S. , Childers Justin T. , Merritt Luke H. , Broster Kayla L. , Treadway Zachary R. , Ugljic Zaim , Wesley Michael T. 
Published: November 2020

AbstractHairy buttercup and cutleaf evening primrose are winter annual weeds that have become more problematic for winter wheat growers in the southern Great Plains and the midsouthern United States in recent years. Little research exists on which to base recommendations for controlling hairy buttercup in wheat, and little research has been published on cutleaf evening primrose control in recent years. With growing concerns of increased herbicide resistance among winter annual weeds, incorporating new herbicide sites of action has become necessary. The objective of this study was to assess halauxifen-methyl as a novel herbicide to control these two problematic winter annual broadleaf weeds in winter wheat in Mississippi and Oklahoma. Studies were conducted across four site-years in Mississippi and one site-year in Oklahoma comparing 15 herbicide programs with and without halauxifen-methyl. Hairy buttercup and cutleaf evening-primrose control was the greatest when a synthetic auxin was combined with an acetolactate synthase–inhibiting herbicide. Treatments including halauxifen-methyl resulted in the greatest control of hairy buttercup, whereas a synthetic auxin herbicide plus chlorsulfuron and metsulfuron resulted in the greatest control of cutleaf evening primrose. Halauxifen-methyl is an effective addition for control of winter annual broadleaf weeds like hairy buttercup and cutleaf evening primrose in winter wheat.
The p53/p73 - p21CIP1 tumor suppressor axis guards against chromosomal instability by restraining CDK1 in human cancer cells
Authors: Schmidt Ann-Kathrin , Pudelko Karoline , Boekenkamp Jan-Eric , Berger Katharina , Kschischo Maik , Bastians Holger 
Published: November 2020

AbstractWhole chromosome instability (W-CIN) is a hallmark of human cancer and contributes to the evolvement of aneuploidy. W-CIN can be induced by abnormally increased microtubule plus end assembly rates during mitosis leading to the generation of lagging chromosomes during anaphase as a major form of mitotic errors in human cancer cells. Here, we show that loss of the tumor suppressor genes TP53 and TP73 can trigger increased mitotic microtubule assembly rates, lagging chromosomes, and W-CIN. CDKN1A, encoding for the CDK inhibitor p21CIP1, represents a critical target gene of p53/p73. Loss of p21CIP1 unleashes CDK1 activity which causes W-CIN in otherwise chromosomally stable cancer cells. Consequently, induction of CDK1 is sufficient to induce abnormal microtubule assembly rates and W-CIN. Vice versa, partial inhibition of CDK1 activity in chromosomally unstable cancer cells corrects abnormal microtubule behavior and suppresses W-CIN. Thus, our study shows that the p53/p73 - p21CIP1 tumor suppressor axis, whose loss is associated with W-CIN in human cancer, safeguards against chromosome missegregation and aneuploidy by preventing abnormally increased CDK1 activity.
Educational attainment reduces the risk of suicide attempt among individuals with and without psychiatric disorders independent of cognition: a bidirectional and multivariable Mendelian randomization study with more than 815,000 participants
Authors: Rosoff Daniel B. , Kaminsky Zachary A. , McIntosh Andrew M. , Davey Smith George , Lohoff Falk W. 
Published: November 2020

AbstractRates of suicidal behavior are increasing in the United States and identifying causal risk factors continues to be a public health priority. Observational literature has shown that educational attainment (EA) and cognitive performance (CP) influence suicide attempt risk; however, the causal nature of these relationships is unknown. Using summary statistics from genome-wide association studies (GWAS) of EA, CP, and suicide attempt risk with > 815,000 combined white participants of European ancestry, we performed multivariable Mendelian randomization (MR) to disentangle the effects of EA and CP on attempted suicide. In single-variable MR (SVMR), EA and CP appeared to reduce suicide attempt risk (EA odds ratio (OR) per standard deviation (SD) increase in EA (4.2 years), 0.524, 95% CI, 0.412–0.666, P = 1.07 × 10−7; CP OR per SD increase in standardized score, 0.714, 95% CI, 0.577–0.885, P = 0.002). Conversely, bidirectional analyses found no effect of a suicide attempt on EA or CP. Using various multivariable MR (MVMR) models, EA seems to be the predominant risk factor for suicide attempt risk with the independent effect (OR, 0.342, 95% CI, 0.206–0.568, P = 1.61 × 10−4), while CP had no effect (OR, 1.182, 95% CI, 0.842–1.659, P = 0.333). In additional MVMR analyses accounting simultaneously for potential behavioral and psychiatric mediators (tobacco smoking; alcohol consumption; and self-reported nerves, tension, anxiety, or depression), the effect of EA was little changed (OR, 0.541, 95% CI, 0.421–0.696, P = 3.33 × 10−6). Consistency of results across complementary MR methods accommodating different assumptions about genetic pleiotropy strengthened causal inference. Our results show that even after accounting for psychiatric disorders and behavioral mediators, EA, but not CP, may causally influence suicide attempt risk among white individuals of European ancestry, which could have important implications for health policy and programs aimed at reducing the increasing rates of suicide. Future work is necessary to examine the EA–suicide relationship populations of different ethnicities.
A circumpolar dust conveyor in the glacial Southern Ocean
Authors: Struve Torben , Pahnke Katharina , Lamy Frank , Wengler Marc , Böning Philipp , Winckler Gisela 
Published: November 2020

AbstractThe increased flux of soluble iron (Fe) to the Fe-deficient Southern Ocean by atmospheric dust is considered to have stimulated the net primary production and carbon export, thus promoting atmospheric CO2 drawdown during glacial periods. Yet, little is known about the sources and transport pathways of Southern Hemisphere dust during the Last Glacial Maximum (LGM). Here we show that Central South America (~24‒32°S) contributed up to ~80% of the dust deposition in the South Pacific Subantarctic Zone via efficient circum-Antarctic dust transport during the LGM, whereas the Antarctic Zone was dominated by dust from Australia. This pattern is in contrast to the modern/Holocene pattern, when South Pacific dust fluxes are thought to be primarily supported by Australian sources. Our findings reveal that in the glacial Southern Ocean, Fe fertilization critically relies on the dynamic interaction of changes in dust-Fe sources in Central South America with the circumpolar westerly wind system.
Transient circular dichroism and exciton spin dynamics in all-inorganic halide perovskites
Authors: Zhao Weijie , Su Rui , Huang Yuqing , Wu Jinqi , Fong Chee Fai , Feng Jiangang , Xiong Qihua 
Published: November 2020

AbstractAll-inorganic metal halides perovskites (CsPbX3, X = Br or Cl) show strong excitonic and spin-orbital coupling effects, underpinning spin-selective excitonic transitions and therefore exhibiting great promise for spintronics and quantum-optics applications. Here we report spin-dependent optical nonlinearities in CsPbX3 single crystals by using ultrafast pump-probe spectroscopy. Many-body interactions between spin-polarized excitons act like a pseudo-magnetic field and thus lift the degeneracy of spin states resulting in a photoinduced circular dichroism. Such spontaneous spin splitting between “spin-up” and “spin-down” excitons can be several tens of milli-electron volts under intense excitations. The exciton spin relaxation time is ~20 picoseconds at very low pump fluence, the longest reported in the metal halides perovskites family at room temperature. The dominant spin-flip mechanism is attributed to the electron-hole exchange interactions. Our results provide essential understandings towards realizing practical spintronics applications of perovskite semiconductors.
Sequentially amplified circularly polarized ultraviolet luminescence for enantioselective photopolymerization
Authors: Han Dongxue , Yang Xuefeng , Han Jianlei , Zhou Jin , Jiao Tifeng , Duan Pengfei 
Published: November 2020

AbstractChiral optical materials based on circularly polarized luminescence (CPL) have emerged rapidly due to their feasible applications in diverse fields of research. However, limited to the small luminescence dissymmetry factor (glum), real application examples have rarely been reported. Here, we present a complex system, which show intense circularly polarized ultraviolet luminescence (CPUVL) with large glum value, enabling a chiral UV light triggered enantioselective polymerization. By integrating sensitized triplet-triplet annihilation upconversion and CPL, both visible-to-UV upconversion emission and upconverted circularly polarized ultraviolet luminescence (UC-CPUVL) were obtained in the systems, built of chiral annihilator R(S)-4,12-biphenyl[2,2]paracyclophane (R-/S-TP), and a thermally activated delayed fluorescence (TADF) sensitizer. After dispersing this upconversion system into room-temperature nematic liquid crystal, induced chiral nematic liquid crystal could significantly amplify the glum value (0.19) of UC-CPUVL. Further, the UC-CPUVL emission has been used to trigger the enantioselective photopolymerization of diacetylene. This work paves the way for the further development of functional application of CPL active materials.
Co-administered antibody improves penetration of antibody–dye conjugate into human cancers with implications for antibody–drug conjugates
Authors: Lu Guolan , Nishio Naoki , van den Berg Nynke S. , Martin Brock A. , Fakurnejad Shayan , van Keulen Stan , Colevas Alexander D. , Thurber Greg M. , Rosenthal Eben L. 
Published: November 2020

AbstractPoor tissue penetration remains a major challenge for antibody-based therapeutics of solid tumors, but proper dosing can improve the tissue penetration and thus therapeutic efficacy of these biologics. Due to dose-limiting toxicity of the small molecule payload, antibody-drug conjugates (ADCs) are administered at a much lower dose than their parent antibodies, which further reduces tissue penetration. We conducted an early-phase clinical trial (NCT02415881) and previously reported the safety of an antibody-dye conjugate (panitumumab-IRDye800CW) as primary outcome. Here, we report a retrospective exploratory analysis of the trial to evaluate whether co-administration of an unconjugated antibody could improve the intratumoral distribution of the antibody-dye conjugate in patients. By measuring the multiscale distribution of the antibody-dye conjugate, this study demonstrates improved microscopic antibody distribution without increasing uptake (toxicity) in healthy tissue when co-administered with the parent antibody, supporting further clinical investigation of the co-administration dosing strategy to improve the tumor penetration of ADCs.
Quest for quantum states via field-altering technology
Authors: Cao Gang , Zhao Hengdi , Hu Bing , Pellatz Nicholas , Reznik Dmitry , Schlottmann Pedro , Kimchi Itamar 
Published: November 2020

AbstractWe report quantum phenomena in spin-orbit-coupled single crystals that are synthesized using an innovative technology that “field-alters” crystal structures via application of magnetic field during crystal growth. This study addresses a major challenge facing the research community today: A great deal of theoretical work predicting exotic states for strongly spin-orbit-coupled, correlated materials has thus far met very limited experimental confirmation. These conspicuous discrepancies are due in part to the extreme sensitivity of these materials to structural distortions. The results presented here demonstrate that the field-altered materials not only are much less distorted but also exhibit phenomena absent in their non-altered counterparts. The field-altered materials include an array of4dand5dtransition metal oxides, and three representative materials presented here are Ba4Ir3O10, Ca2RuO4, and Sr2IrO4. This study provides an approach for discovery of quantum states and materials otherwise unavailable.
Uncovering cancer gene regulation by accurate regulatory network inference from uninformative data
Authors: Seçilmiş Deniz , Hillerton Thomas , Morgan Daniel , Tjärnberg Andreas , Nelander Sven , Nordling Torbjörn E. M. , Sonnhammer Erik L. L. 
Published: November 2020

AbstractThe interactions among the components of a living cell that constitute the gene regulatory network (GRN) can be inferred from perturbation-based gene expression data. Such networks are useful for providing mechanistic insights of a biological system. In order to explore the feasibility and quality of GRN inference at a large scale, we used the L1000 data where ~1000 genes have been perturbed and their expression levels have been quantified in 9 cancer cell lines. We found that these datasets have a very low signal-to-noise ratio (SNR) level causing them to be too uninformative to infer accurate GRNs. We developed a gene reduction pipeline in which we eliminate uninformative genes from the system using a selection criterion based on SNR, until reaching an informative subset. The results show that our pipeline can identify an informative subset in an overall uninformative dataset, allowing inference of accurate subset GRNs. The accurate GRNs were functionally characterized and potential novel cancer-related regulatory interactions were identified.
Evaluation of pathogen specific urinary peptides in tick-borne illnesses
Authors: Magni Ruben , Almofee Raghad , Yusuf Sameen , Mueller Claudius , Vuong Ngoc , Almosuli Mahmood , Hoang Minh Thu , Meade Katherine , Sethi Ish , Mohammed Nuha , Araujo Robyn , McDonald Teresa Kaza , Marcelli Paul , Espina Virginia , Kim Brianna , Garritsen Anja , Green Christine , Russo Paul , Zhou Weidong , Vaisman Iosif , Petricoin Emanuel F. , Hoadley Deborah , Molestina Robert E. , McIntyre Hope , Liotta Lance A. , Luchini Alessandra 
Published: November 2020

AbstractMass spectrometry enhanced by nanotechnology can achieve previously unattainable sensitivity for characterizing urinary pathogen-derived peptides. We utilized mass spectrometry enhanced by affinity hydrogel particles (analytical sensitivity = 2.5 pg/mL) to study tick pathogen-specific proteins shed in the urine of patients with (1) erythema migrans rash and acute symptoms, (2) post treatment Lyme disease syndrome (PTLDS), and (3) clinical suspicion of tick-borne illnesses (TBI). Targeted pathogens were Borrelia, Babesia, Anaplasma, Rickettsia, Ehrlichia, Bartonella, Francisella, Powassan virus, tick-borne encephalitis virus, and Colorado tick fever virus. Specificity was defined by 100% amino acid sequence identity with tick-borne pathogen proteins, evolutionary taxonomic verification for related pathogens, and no identity with human or other organisms. Using a cut off of two pathogen peptides, 9/10 acute Lyme Borreliosis patients resulted positive, while we identified zero false positive in 250 controls. Two or more pathogen peptides were identified in 40% of samples from PTLDS and TBI patients (categories 2 and 3 above, n = 59/148). Collectively, 279 distinct unique tick-borne pathogen derived peptides were identified. The number of pathogen specific peptides was directly correlated with presence or absence of symptoms reported by patients (ordinal regression pseudo-R2 = 0.392, p = 0.010). Enhanced mass spectrometry is a new tool for studying tick-borne pathogen infections.
Sequential laxative-probiotic usage for treatment of irritable bowel syndrome: a novel method inspired by mathematical modelling of the microbiome
Authors: Li Ming , Xu Ri , Li Yan-qing 
Published: November 2020

AbstractThe gut microbiome plays an important role in human health. However, its response to external intervention is complex. A previous study showed that the response to Clostridium butyricum (CB) treatment of irritable bowel syndrome (IBS) is heterogeneous. We proposed that mathematical model simulation of the microbiota may help to optimize the management of IBS-associated microbiota. In this study, a novel mathematical non-extinction and defecation normalized (NEDN) model was generated for stable simulation of the dynamic nature of gut microbiota. In silico simulation revealed that a laxative may create a favourable opportunity for Clostridium cluster XIVa to shift the microbiota. An explorative clinical trial was conducted to compare three CB regimens in an IBS cohort: laxative, interval of 2 weeks and CB administration for 2 weeks (L2P); laxative immediately followed by CB administration (LP) for 2 weeks; and CB administration for 2 weeks (P). The LP regimen optimally relieved the IBS symptoms and shifted the microbiota closer to those of the healthy subjects during 2 weeks of CB intake. These results indicate that integration of biological/mathematical approaches and clinical scenarios is a promising method for management of microbiota. Additionally, the optimal effect of sequential laxative-CB usage for IBS treatment warrants further validation.Clinical trial registration numbers: NCT02254629.Date of registration: October 2, 2014.
Drivers and impacts of the most extreme marine heatwave events
Authors: Sen Gupta Alex , Thomsen Mads , Benthuysen Jessica A. , Hobday Alistair J. , Oliver Eric , Alexander Lisa V. , Burrows Michael T. , Donat Markus G. , Feng Ming , Holbrook Neil J. , Perkins-Kirkpatrick Sarah , Moore Pippa J. , Rodrigues Regina R. , Scannell Hillary A. , Taschetto Andréa S. , Ummenhofer Caroline C. , Wernberg Thomas , Smale Dan A. 
Published: November 2020

AbstractProlonged high-temperature extreme events in the ocean, marine heatwaves, can have severe and long-lasting impacts on marine ecosystems, fisheries and associated services. This study applies a marine heatwave framework to analyse a global sea surface temperature product and identify the most extreme events, based on their intensity, duration and spatial extent. Many of these events have yet to be described in terms of their physical attributes, generation mechanisms, or ecological impacts. Our synthesis identifies commonalities between marine heatwave characteristics and seasonality, links to the El Niño-Southern Oscillation, triggering processes and impacts on ocean productivity. The most intense events preferentially occur in summer, when climatological oceanic mixed layers are shallow and winds are weak, but at a time preceding climatological maximum sea surface temperatures. Most subtropical extreme marine heatwaves were triggered by persistent atmospheric high-pressure systems and anomalously weak wind speeds, associated with increased insolation, and reduced ocean heat losses. Furthermore, the most extreme events tended to coincide with reduced chlorophyll-aconcentration at low and mid-latitudes. Understanding the importance of the oceanic background state, local and remote drivers and the ocean productivity response from past events are critical steps toward improving predictions of future marine heatwaves and their impacts.