bluuebunny/crossref_metadata_2025_split huggingface dataset:
Knowledge, awareness and practices of malaria in Western Area Rural District, Sierra Leone: a household-based cross-sectional survey in the middle of National Malaria Strategic Plan (2016-2020)
Authors: WANG Lili , Yin Jianhai , Zheng Canjun , Smith Samuel Juana , Ngegba Esther , Huang Xiaoxia , Kamara Anitta , Chen Xia , Wang Xu , Luo Wei , Kan Biao 
Published: September 2020

Abstract
Background The malaria epidemic is high in Sierra Leone, and the implementation of the National Malaria Strategic Plan (2016-2020) has reached its middle stage. In order to guide the interventions more specifically in future, a household-based cross-sectional survey was conducted to understand the public perception of knowledge, attitudes and practices of malaria and its control.Methods Three communities (Grafton, Jui and Kossoh) in Western Area Rural District within close proximity to Sierra Leone’s capital city of Freetown were included. Households were randomly selected and interviewed with a structural questionnaire covering malaria infection, diagnosis, treatment and prevention, as well as the knowledge of malaria prevention, in collaboration with the National Malaria Control Program of the Ministry of Health and Sanitation, Sierra Leone. Results A total of 262 qualified questionnaires were included. The average cost for meals per day is around 30000 Leones in each household. The awareness rate of having heard of malaria is 98.1% (257/262) and knowing mosquito biting as its main route of transmission is 86.6% (227/262) respectively. And 80.9% (212/262) of the respondents sought health advice or treatment for the illness, and similar percentage of them could be tested for malaria, mostly through RDTs. A great demand of long-lasting insecticidal nets (72.1%) was raised to fulfill the high shortage (61.8%, 162/262) in households, and of them there were 66 families having children under five years old.Conclusion Malaria burden is still high. Although public awareness of malaria prevention sounds well in this survey, the fact that the coverage of supplies and the use of preventive measures against malaria is low in households within the three communities. It is suggested that an advanced campaign should be carried out to scale up not only the knowledge on malaria but also the actual coverage and usage of malaria prevention measures, contributing to the achievements of planned objectives.
Managing diabetes mellitus with comorbidities in primary healthcare facilities: a qualitative study among physicians in Odisha, India
Authors: Pati Sandipana , Pati Sanghamitra , Akker Marjan van den , Schellevis F. (François) G. , Sahoo Krushna , Burgers Jako S. 
Published: September 2020

Abstract
AimTo explore the perceived barriers and facilitators in the management of the patients having diabetes with comorbidities by primary care physicians.MethodsA qualitative In-Depth Interview study was conducted among the primary care physicians at seventeen urban primary health care centres at Bhubaneswar city of Odisha, India. The digitally recorded interviews were transcribed verbatim and translated into English. The data were analysed using content analysis.ResultsBarriers related to physicians, patients and health system were identified. Physicians felt lack of necessary knowledge and skills, communication skills and overburdening due to multiple responsibilities to be major barriers to quality care. Patients’ attitude and beliefs along with socio-economic status played an important role in treatment adherence and in the management of their disease conditions. Poor infrastructure, irregular medicine supply, and shortage of skilled allied health professionals were also found to be barriers to optimal care delivery, as was the lack of electronic medical records and personal treatment records.ConclusionComprehensive guidelines with on the job training for capacity building of the physicians and creation of multidisciplinary teams at primary care level for a more holistic approach towards management of diabetes with comorbidities could be the way forward to optimal delivery of care.
Analysis of Six Chloroplast Genomes Provides Insight into the Evolution of Chrysosplenium (Saxifragaceae)
Authors: Wu Zhihua , Liao Rui , Yang Tiange , Dong Xiang , Lan Deqing , Qin Rui , Liu Hong 
Published: September 2020

Abstract
Background: Chrysosplenium L. (Saxifragaceae) is a genus of plants widely distributed in Northern Hemisphere and usually found in moist, shaded valleys and mountain slopes. This genus is ideal for studying plant adaptation to low light conditions. Although some progress has been made in the systematics and biogeography of Chrysosplenium, its chloroplast genome evolution remains to be investigated. Results: To fill this gap, we sequenced the chloroplast genomes of six Chrysosplenium species and analyzed their genome structure, GC content, and nucleotide diversity. Moreover, we performed a phylogenetic analysis and calculated non-synonymous (Ka) /synonymous (Ks) substitution ratios using the combined protein-coding genes of 29 species within Saxifragales and two additional species as outgroups, as well as a pair-wise estimation for each gene within Chrysosplenium. Compared with the outgroups in Saxifragaceae, the six Chrysosplenium chloroplast genomes had lower GC contents; they also had conserved boundary regions and gene contents, as only the rpl32 gene was lost in four of the Chrysosplenium chloroplast genomes. Phylogenetic analyses suggested that the Chrysosplenium separated to two major clades (the opposite group and the alternate group). The selection pressure estimation (Ka/Ks ratios) of genes in the Chrysosplenium species showed that matK and ycf2 were subjected to positive selection.Conclusion: This study provides genetic resources for exploring the phylogeny of Chrysosplenium and sheds light on plant adaptation to low light conditions. The lower average GC content and the lacking gene of rpl32 indicated selective pressure in their unique habitats. Different from results previously reported, our selective pressure estimation suggested that the genes related to photosynthesis (such as ycf2) were under positive selection at sites in the coding region.
A systematic review of PTSD to the experience of Psychosis: Prevalence and associated factors
Authors: Buswell Georgina , Haime Zoë , Lloyd-Evans Brynmor , Billings Jo 
Published: September 2020

Abstract
Background: Psychosis can be a sufficiently traumatic event to lead to post-traumatic stress disorder (PTSD). Previous research has focussed on the trauma of first episode psychosis (FEP) and the only review to date of PTSD beyond the first episode period is potentially outdated.Methods: We searched electronic databases and reference lists using predetermined inclusion criteria to retrieve studies that reported prevalence rates and associated factors of psychosis-related PTSD across all stages of the course of psychosis. Studies were included if they measured PTSD specifically related to the experience of psychosis. Risk of bias was assessed using an adapted version of the Newcastle Ottawa Scale. Results were synthesised narratively.Results: Six papers met inclusion criteria. Prevalence estimates of psychosis-related PTSD varied from 14% to 47%. Studies either assessed first-episode samples or did not specify the number of episodes experienced. Depression was consistently associated with psychosis-related PTSD. Other potential associations included treatment-related factors, psychosis severity, childhood trauma, and individual psychosocial reactions to trauma.Conclusions: Psychosis-related PTSD is a common problem in people with psychosis. There is a lack of published research on this beyond first episode psychosis. Further research is needed on larger, more generalizable samples. Our results tentatively suggest that prevalence rates of psychosis-related PTSD have not reduced over the past decade despite ambitions to provide trauma-informed care.Prospero registration number: CRD42019138750
A Novel Automobile Antenna for Vehicles Communication of IoT Systems in 5G Network
Authors: Luo Wei , Chen Wuquan , Feng Yulu , Yang Yuqi 
Published: September 2020

Abstract
The Internet of vehicles (IoV) is an important part of mobile communication system with the development of Internet of things (IoT). A novel multiband automobile antenna is proposed, which can cover all frequency bands for the long-term evolution (LTE), the 5th generation wireless systems (5G), the wireless local area network (WLAN) and the dedicated short-range communication (DSRC) (from 690 MHz to 944 MHz and from 1.46 GHz to 6 GHz). The antenna is designed based on the monopole antenna, and the impedance matching performance of the antenna is improved by loading the toothed capacitor and the impedance matching disc. The simulation results show that the automobile antenna achieves good impedance matching in the working bandwidth and obtains omnidirectional radiation pattern in the horizontal direction. The electric field distribution of the antenna placed on the vehicle roof is simulated to evaluate the network performance of the antenna system in the urban environment. The transmission coefficient of the transceiver system using the automobile antenna is also analyzed based on the electromagnetic simulation results and statistical model. The blind area of mobile communication system is effectively covered with the automobile antenna, which could be used to connect the LTE cell and the IoV system.
Physiological and molecular characterization of active fungi in pesticides contaminated soils for degradation of glyphosate
Authors: Njoku Kelechi L. , Eludini Peter O. , Adesuyi Adeola A. , Ude Emea O. , Oyelami Ayodeji O. 
Published: September 2020

Abstract
Understanding the physiological and molecular characteristics of naturally occurring fungi in glyphosate pesticide contaminated environment is crucial to managing its contamination. The study was aimed at isolating and characterizing soil fungi for their physiological roles towards glyphosate degradation. Pure cultures of fungi were isolated from soil contaminated with glyphosate at farms in Lagos, Nigeria. The cultures were grown on minimal salt agar media amended with glyphosate. The best isolates exhibiting good tolerance to the glyphosate were characterized using molecular techniques. The BLAST search indicated that the fungi belong to four Aspergillus species (Aspergillus flavus strain JN-YG-3-5, Aspergillus niger strain APBSDSF96, Aspergillus fumigatus strain FJAT-31052 and Aspergillus flavus strain APBSWTPF130, Trichoderma gamsii and Penicillium simplicissimum. The biodegradation study of the glyphosate by the selected fungi species showed the presence of Aminomethylphosphonic Acid (AMPA) except for Aspergillus fumigatus strain FJAT-31052. Annotation analysis of the partial gene sequence shows that the strains possess protein coding gene clusters for glyphosate utilization and other physiological activities. The GhostKOALA output confirmed that CYP2W1 gene (Cytochrome P450, fungi type) was present in Aspergillus fumigatus strain FJAT-31052 which was absent in genome of other fungi. The physiological and molecular characteristics of Aspergillus fumigatus strain FJAT-31052 clearly show that this isolate is a useful organism for managing contamination by glyphosate pesticide.
Griseococcin(1) from Bovistella radicata (Mont.) Pat and antifungal activity
Authors: Ye Yong , Zeng Qinghua , Zeng Qingmei 
Published: September 2020

Abstract
BackgroundTo evaluate the antimicrobial and microbicidel activity of B. radicata fermentation broth, the broth was purified by DEAE-cellulose and sephadex LC-20 column. The compounds were submitted to spectral analyses (HPLC, FT-IR, 1D and 2D NMR etc.). ResultsThe purified compounds were identified as the Griseococcin(s) which were naphthoquinone derivatives, the Chemical formula and MW of Griseococcin(1) was determined as C37O10H43N and 661Da. only Griseococcin(1) has good antimicrobial activity among the Griseococcin(s). The zone of inhibition (ZOI), minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC) or minimum fungicidal concentration (MFC) of Griseococcin(1) were used to investigate the antimicrobial activity. Antifungal activity of Griseococcin(1) was significant, especially for main pathogenic fungus Trichophyton rubrum and Trichophyton mentagrophytes, MFC/MIC of Griseococcin(1) was 1, while MFC/MIC of postive control was greater than 4, the fungicidal effect of Griseococcin(1) was better than that of positive control.ConclusionsIn this paper, the secondary metabolite compound Griseococcin(1) from B. radicata was purified. The purified compound can restrain main pathogens (T. rubrum and T. mentagrophytes) leading to tinea pedis. The antifungal activity of Griseococcin(1) was similar to that of the positive control and the fungicidal effect of Griseococcin(1) was better than that of positive control, it might be suitable for pharmaceutical industries.
Dysphagia and Masticatory Performance as a Mediator of the Xerostomia to Quality of Life Relation in the Older Population
Authors: Lu Ting-Yu , Chen Jen-Hao , Du Je-Kan , Lin Ying-Chun , Ho Pei-Shan , Lee Chien-Hung , Hu Chih-yang , Huang Hsiao-Ling 
Published: September 2020

Abstract
Background: The impact of poor oral health in older adults affecting their quality of life is a public health problem. This study assessed the mediating effects of dental status, occlusal condition, dysphagia and masticatory performance on the association between xerostomia and oral health-related quality of life (OHRQoL) in the older population. Methods: Stratified cluster sampling method was used to recuit 1100 community-dwelling adults aged 65 years and older from Kaohsiung, Taiwan. Community care centers were randomly selected based on their geographic classifications (urban, rural, and mountainous areas). Assessments of dental status and occlusal condition were performed by dentists. Information on demographics, physical function, xerostomia dysphagia and depression was collected using face-to-face interview. Masticatory performance was evaluated using color-changeable chewing gum. OHRQoL was measured using Geriatric Oral Health Assessment Index. Hierarchical regression models were utilized to assess the relationship between OHRQoL and physical function, dental status and oral function in older adults. Path analysis was used to estimate direct and indirect pathways between xerostomia and OHRQoL.Results: Participants with xerostomia had a 0.17 OHRQoL reduction (p< .001) comparing to the non-xerostomia, and the direct effect was accounted for 85.0% of the total effect. The dysphagia and the poor masticatory performance were found to have a significant mediating effect on the association between xerostomia and OHRQoL (βs = 0.17 and −0.09, respectively, both p< .001; βs = 0.05 and −0.08, respectively, both p< .001) moreover, potential mediating influences of the number of functional teeth (βs = −0.11 and −0.44, respectively, both p < .001) and poor occlusal condition (βs = 0.09 and 0.12, respectively, both p < .05) on the relationship between xerostomia and masticatory performance were obervered.Conclusions: Dysphagia and poor masticatory performance may serve as a pathway of which xerostomia affects quality of life. Providing early oral function intervention may be a valuable and actionable target for older adults to maintain their quality of life. Our results further suggest that checkup and screening for oral dysfunction is essential to prevent or delay the onset of complications.
Specific shifts in the endocannabinoid system in hibernating brown bears
Authors: Boyer Christian , Cussonneau Laura , Brun Charlotte , Deval Christiane , de Barros Jean-Paul Pais , Chanon Stéphanie , Bernoud-Hubac Nathalie , Daira Patricia , Evans Alina L. , Arnemo Jon M. , Swenson Jon E. , Gauquelin-Koch Guillemette , Simon Chantal , Blanc Stéphane , Combaret Lydie , Bertile Fabrice , Lefai Etienne 
Published: September 2020

Abstract
In small hibernators, global downregulation of the endocannabinoid system (ECS), which is involved in modulating neuronal signaling, feeding behavior, energy metabolism, and circannual rhythms, has been reported to possibly drive physiological adaptation to the hibernating state. In hibernating brown bears ( Ursus arctos ), we hypothesized that beyond an overall suppression of the ECS, seasonal shift in endocannabinoids compounds could be linked to bear’s peculiar features that include hibernation without arousal episodes and capacity to react to external disturbance. We explored circulating lipids in serum and the ECS in plasma and metabolically active tissues in free-ranging subadult Scandinavian brown bears when both active and hibernating. In winter bear serum, in addition to a 2-fold increase in total fatty acid concentration, we found significant changes in relative proportions of circulating fatty acids, such as a 2-fold increase in docosahexaenoic acid C22:6 n-3 and a decrease in arachidonic acid C20:4 n-6. In adipose and muscle tissues of hibernating bears, we found significant lower concentrations of 2-arachidonoylglycerol (2-AG), a major ligand of cannabinoid receptors 1 (CB1) and 2 (CB2). Lower mRNA level for genes encoding CB1 and CB2 were also found in winter muscle and adipose tissue, respectively. The observed reduction in ECS tone may promote fatty acid mobilization from body fat stores, and favor carbohydrate metabolism in skeletal muscle of hibernating bears. Additionally, high circulating level of the endocannabinoid-like compound N-oleoylethanolamide (OEA) in winter could favor lipolysis and fatty acid oxidation in peripheral tissues. We also speculated on a role of OEA in the conservation of an anorexigenic signal and in the maintenance of torpor during hibernation, while sustaining the capacity of bears to sense stimuli from the environment.
Development and validation of a novel stem cell subtype for bladder cancer based on stem genomic profiling
Authors: Tang Chaozhi , Ma Jiakang , Liu Xiuli , Liu Zhengchun 
Published: September 2020

Abstract
Background: Bladder cancer (BLCA) is the fifth most common type of cancer worldwide, with high recurrence and progression rates. Although considerable progress has been made in the treatment of BLCA through accurate typing of molecular characteristics, little is known regarding the various genetic and epigenetic changes that have evolved in stem and progenitor cells. To address this issue, we have developed a novel stem cell typing method.Methods: Based on six published genomic datasets, we used 26 stem cell gene sets to classify each dataset. Unsupervised and supervised machine learning methods were used to perform the classification. Results: We classified BLCA into three subtypes—high stem cell enrichment (SCE_H), medium stem cell enrichment (SCE_M), and low stem cell enrichment (SCE_L)—based on multiple cross-platform datasets. The stability and reliability of the classification were verified. Compared with the other subtypes, SCE_H had the highest degree of cancer stem cell concentration, highest level of immune cell infiltration, and highest sensitivity not only to predicted anti-PD-1 immunosuppressive therapy but also to conventional chemotherapeutic agents such as cisplatin, sunitinib, and vinblastine; however, this group had the worst prognosis. Comparison of gene set enrichment analysis results for pathway enrichment of various subtypes reveal that the SCE_H subtype activates the important pathways regulating cancer occurrence, development, and even poor prognosis, including epithelial mesenchymal transition, hypoxia, angiogenesis, KRAS signal upregulation, interleukin 6-mediated JAK-STAT signaling pathway, and inflammatory response. Two identified pairs of transcription factors, GRHL2 and GATA6 and IRF5 and GATA3, possibly have opposite regulatory effects on SCE_H and SCE_L, respectively.Conclusions: The identification of BLCA subtypes based on cancer stem cell gene sets revealed the complex mechanism of carcinogenesis of BLCA and provides a new direction for the diagnosis and treatment of BLCA.
COVID-19: Famotidine, Histamine, Mast Cells, and Mechanisms
Authors: Malone Robert W. , Tisdall Philip , Fremont-Smith Philip , Liu Yongfeng , Huang Xi-Ping , White Kris M. , Miorin Lisa , Olmo Elena Moreno Del , Alon Assaf , Delaforge Elise , Hennecker Christopher D. , Wang Guanyu , Pottel Joshua , Smith Nora , Hall Julie M. , Shapiro Gideon , Mittermaier Anthony , Kruse Andrew C. , García-Sastre Adolfo , Roth Bryan L. , Glasspool-Malone Jill , Ricke Darrell O. 
Published: September 2020

Abstract
SARS-CoV-2 infection is required for COVID-19, but many signs and symptoms of COVID-19 differ from common acute viral diseases. Currently, there are no pre- or post-exposure prophylactic COVID-19 medical countermeasures. Clinical data suggest that famotidine may mitigate COVID-19 disease, but both mechanism of action and rationale for dose selection remain obscure. We explore several plausible avenues of activity including antiviral and host-mediated actions. We propose that the principal famotidine mechanism of action for COVID-19 involves on-target histamine receptor H2 activity, and that development of clinical COVID-19 involves dysfunctional mast cell activation and histamine release.
Application of compound material alleviates saline and alkaline stress in cotton leaves through regulation of the transcriptome
Authors: An Mengjie , Wang Xiaoli , Chang Doudou , Wang Shuai , Hong Dashuang , Fan Hua , Wang Kaiyong 
Published: September 2020

Abstract
Background: Soil salinization and alkalinization are the main factors that affect the agricultural productivity. Evaluating the persistence of the compound material applied in field soils is an important part of the regulation of the responses of cotton to saline and alkaline stresses. Result: To determine the molecular effects of compound material on the cotton’s responses to saline stress and alkaline stress, cotton was planted in the salinized soil (NaCl 8g kg -1 ) and alkalized soil (Na 2 CO 3 8g kg -1 ) after application of the compound material, and ion content, physiological characteristics, and transcription of new cotton leaves at flowering and boll-forming stage were analyzed. The results showed that compared with saline stress, alkaline stress increased the contents of Na + , K + , SOD, and MDA in leaves. The application of the compound material reduced the content of Na + but increased the K + /Na + ratio , the activities of SOD, POD, and CAT, and REC. Transcriptome analysis revealed that after the application of the compound material, the Na + /H + exchanger gene in cotton leaves was down-regulated, while the K + transporter, K + channel, and POD genes were up-regulated. Besides, the down-regulation of genes related to lignin synthesis in phenylalanine biosynthesis pathway had a close relationship with the ion content and physiological characteristics in leaves. The quantitative analysis with PCR proved the reliability of the results of RNA sequencing. Conclusion: These findings suggest that the compound material alleviated saline stress and alkaline stress on cotton leaves by regulating candidate genes in key biological pathways, which improves our understanding of the molecular mechanism of the compound material regulating the responses of cotton to saline stress and alkaline stress.