bluuebunny/crossref_metadata_2025_split huggingface dataset:
Neural computations underlying strategic social decision-making in groups
Authors: Park Seongmin A. , Sestito Mariateresa , Boorman Erie D. , Dreher Jean-Claude 
Published: November 2019

AbstractWhen making decisions in groups, the outcome of one’s decision often depends on the decisions of others, and there is a tradeoff between short-term incentives for an individual and long-term incentives for the groups. Yet, little is known about the neurocomputational mechanisms at play when weighing different utilities during repeated social interactions. Here, using model-based fMRI and Public-good-games, we find that the ventromedial prefrontal cortex encodes immediate expected rewards as individual utility while the lateral frontopolar cortex encodes group utility (i.e., pending rewards of alternative strategies beneficial for the group). When it is required to change one’s strategy, these brain regions exhibited changes in functional interactions with brain regions engaged in switching strategies. Moreover, the anterior cingulate cortex and the temporoparietal junction updated beliefs about the decision of others during interactions. Together, our findings provide a neurocomputational account of how the brain dynamically computes effective strategies to make adaptive collective decisions.
In situ formation of mononuclear complexes by reaction-induced atomic dispersion of supported noble metal nanoparticles
Authors: Feng Siquan , Song Xiangen , Liu Yang , Lin Xiangsong , Yan Li , Liu Siyue , Dong Wenrui , Yang Xueming , Jiang Zheng , Ding Yunjie 
Published: November 2019

AbstractSupported noble metal nanoclusters and single-metal-site catalysts are inclined to aggregate into particles, driven by the high surface-to-volume ratio. Herein, we report a general method to atomically disperse noble metal nanoparticles. The activated carbon supported nanoparticles of Ru, Rh, Pd, Ag, Ir and Pt metals with loading up to 5 wt. % are completely dispersed by reacting with CH3I and CO mixture. The dispersive process of the Rh nanoparticle is investigated in depth as an example. The in-situ detected I• radicals and CO molecules are identified to promote the breakage of Rh-Rh bonds and the formation of mononuclear complexes. The isolated Rh mononuclear complexes are immobilized by the oxygen-containing functional groups based on the effective atomic number rule. The method also provides a general strategy for the development of single-metal-site catalysts for other applications.
An efficient and stable photoelectrochemical system with 9% solar-to-hydrogen conversion efficiency via InGaP/GaAs double junction
Authors: Varadhan Purushothaman , Fu Hui-Chun , Kao Yu-Cheng , Horng Ray-Hua , He Jr-Hau 
Published: November 2019

AbstractDespite III-V semiconductors demonstrating extraordinary solar-to-hydrogen (STH) conversion efficiencies, high cost and poor stability greatly impede their practical implementation in photoelectrochemical (PEC) water splitting applications. Here, we present a simple and efficient strategy for III-V-based photoelectrodes that functionally and spatially decouples the light harvesting component of the device from the electrolysis part that eliminates parasitic light absorption, reduces the cost, and enhances the stability without any compromise in efficiency. The monolithically integrated PEC cell was fabricated by an epitaxial lift-off and transfer of inversely grown InGaP/GaAs to a robust Ni-substrate and the resultant photoanode exhibits an STH efficiency of ~9% with stability ~150 h. Moreover, with the ability to access both sides of the device, we constructed a fully-integrated, unassisted-wireless “artificial leaf” system with an STH efficiency of ~6%. The excellent efficiency and stability achieved herein are attributed to the light harvesting/catalysis decoupling scheme, which concurrently improves the optical, electrical, and electrocatalytic characteristics.
Triplet–triplet upconversion enhanced by spin–orbit coupling in organic light-emitting diodes
Authors: Ieuji Ryota , Goushi Kenichi , Adachi Chihaya 
Published: November 2019

AbstractTriplet–triplet upconversion, in which two triplet excitons are converted to one singlet exciton, is a well-known approach to exceed the limit of electroluminescence quantum efficiency in conventional fluorescence-based organic light-emitting diodes. Considering the spin multiplicity of triplet pairs, upconversion efficiency is usually limited to 20%. Although this limit can be exceeded when the energy of a triplet pair is lower than that of a second triplet excited state, such as for rubrene, it is generally difficult to engineer the energy levels of higher triplet excited states. Here, we investigate the upconversion efficiency of a series of new anthracene derivatives with different substituents. Some of these derivatives show upconversion efficiencies close to 50% even though the calculated energy levels of the second triplet excited states are lower than twice the lowest triplet energy. A possible upconversion mechanism is proposed based on the molecular structures and quantum chemical calculations.
Brain activity regulates loose coupling between mitochondrial and cytosolic Ca2+ transients
Authors: Lin Yuan , Li Lin-Lin , Nie Wei , Liu Xiaolei , Adler Avital , Xiao Chi , Lu Fujian , Wang Liping , Han Hua , Wang Xianhua , Gan Wen-Biao , Cheng Heping 
Published: November 2019

AbstractMitochondrial calcium ([Ca2+]mito) dynamics plays vital roles in regulating fundamental cellular and organellar functions including bioenergetics. However, neuronal [Ca2+]mito dynamics in vivo and its regulation by brain activity are largely unknown. By performing two-photon Ca2+ imaging in the primary motor (M1) and visual cortexes (V1) of awake behaving mice, we find that discrete [Ca2+]mito transients occur synchronously over somatic and dendritic mitochondrial network, and couple with cytosolic calcium ([Ca2+]cyto) transients in a probabilistic, rather than deterministic manner. The amplitude, duration, and frequency of [Ca2+]cyto transients constitute important determinants of the coupling, and the coupling fidelity is greatly increased during treadmill running (in M1 neurons) and visual stimulation (in V1 neurons). Moreover, Ca2+/calmodulin kinase II is mechanistically involved in modulating the dynamic coupling process. Thus, activity-dependent dynamic [Ca2+]mito-to-[Ca2+]cyto coupling affords an important mechanism whereby [Ca2+]mito decodes brain activity for the regulation of mitochondrial bioenergetics to meet fluctuating neuronal energy demands as well as for neuronal information processing.
Prefrontal cortical ChAT-VIP interneurons provide local excitation by cholinergic synaptic transmission and control attention
Authors: Obermayer Joshua , Luchicchi Antonio , Heistek Tim S. , de Kloet Sybren F. , Terra Huub , Bruinsma Bastiaan , Mnie-Filali Ouissame , Kortleven Christian , Galakhova Anna A. , Khalil Ayoub J. , Kroon Tim , Jonker Allert J. , de Haan Roel , van de Berg Wilma D. J. , Goriounova Natalia A. , de Kock Christiaan P. J. , Pattij Tommy , Mansvelder Huibert D. 
Published: November 2019

AbstractNeocortical choline acetyltransferase (ChAT)-expressing interneurons are a subclass of vasoactive intestinal peptide (ChAT-VIP) neurons of which circuit and behavioural function are unknown. Here, we show that ChAT-VIP neurons directly excite neighbouring neurons in several layers through fast synaptic transmission of acetylcholine (ACh) in rodent medial prefrontal cortex (mPFC). Both interneurons in layers (L)1–3 as well as pyramidal neurons in L2/3 and L6 receive direct inputs from ChAT-VIP neurons mediated by fast cholinergic transmission. A fraction (10–20%) of postsynaptic neurons that received cholinergic input from ChAT-VIP interneurons also received GABAergic input from these neurons. In contrast to regular VIP interneurons, ChAT-VIP neurons did not disinhibit pyramidal neurons. Finally, we show that activity of these neurons is relevant for behaviour and they control attention behaviour distinctly from basal forebrain ACh inputs. Thus, ChAT-VIP neurons are a local source of cortical ACh that directly excite neurons throughout cortical layers and contribute to attention.
Light programmable micro/nanomotors with optically tunable in-phase electric polarization
Authors: Liang Zexi , Teal Daniel , Fan Donglei 
Published: November 2019

AbstractTo develop active nanomaterials that can instantly respond to external stimuli with designed mechanical motions is an important step towards the realization of nanorobots. Herein, we present our finding of a versatile working mechanism that allows instantaneous change of alignment direction and speed of semiconductor nanowires in an external electric field with simple visible-light exposure. The light induced alignment switch can be cycled over hundreds of times and programmed to express words in Morse code. With theoretical analysis and simulation, the working principle can be attributed to the optically tuned real-part (in-phase) electrical polarization of a semiconductor nanowire in aqueous suspension. The manipulation principle is exploited to create a new type of microscale stepper motor that can readily switch between in-phase and out-phase modes, and agilely operate independent of neighboring motors with patterned light. This work could inspire the development of new types of micro/nanomachines with individual and reconfigurable maneuverability for many applications.
Femtosecond X-ray induced changes of the electronic and magnetic response of solids from electron redistribution
Authors: Higley Daniel J. , Reid Alex H. , Chen Zhao , Guyader Loïc Le , Hellwig Olav , Lutman Alberto A. , Liu Tianmin , Shafer Padraic , Chase Tyler , Dakovski Georgi L. , Mitra Ankush , Yuan Edwin , Schlappa Justine , Dürr Hermann A. , Schlotter William F. , Stöhr Joachim 
Published: November 2019

AbstractResonant X-ray absorption, where an X-ray photon excites a core electron into an unoccupied valence state, is an essential process in many standard X-ray spectroscopies. With increasing X-ray intensity, the X-ray absorption strength is expected to become nonlinear. Here, we report the onset of such a nonlinearity in the resonant X-ray absorption of magnetic Co/Pd multilayers near the Co L$${}_{3}$$

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edge. The nonlinearity is directly observed through the change of the absorption spectrum, which is modified in less than 40 fs within 2 eV of its threshold. This is interpreted as a redistribution of valence electrons near the Fermi level. For our magnetic sample this also involves mixing of majority and minority spins, due to sample demagnetization. Our findings reveal that nonlinear X-ray responses of materials may already occur at relatively low intensities, where the macroscopic sample is not destroyed, providing insight into ultrafast charge and spin dynamics.
The role of cyclone activity in snow accumulation on Arctic sea ice
Authors: Webster M. A. , Parker C. , Boisvert L. , Kwok R. 
Published: November 2019

AbstractIdentifying the mechanisms controlling the timing and magnitude of snow accumulation on sea ice is crucial for understanding snow’s net effect on the surface energy budget and sea-ice mass balance. Here, we analyze the role of cyclone activity on the seasonal buildup of snow on Arctic sea ice using model, satellite, and in situ data over 1979–2016. On average, 44% of the variability in monthly snow accumulation was controlled by cyclone snowfall and 29% by sea-ice freeze-up. However, there were strong spatio-temporal differences. Cyclone snowfall comprised ~50% of total snowfall in the Pacific compared to 83% in the Atlantic. While cyclones are stronger in the Atlantic, Pacific snow accumulation is more sensitive to cyclone strength. These findings highlight the heterogeneity in atmosphere-snow-ice interactions across the Arctic, and emphasize the need to scrutinize mechanisms governing cyclone activity to better understand their effects on the Arctic snow-ice system with anthropogenic warming.
GPCR-induced calcium transients trigger nuclear actin assembly for chromatin dynamics
Authors: Wang Ying , Sherrard Alice , Zhao Bing , Melak Michael , Trautwein Jonathan , Kleinschnitz Eva-Maria , Tsopoulidis Nikolaos , Fackler Oliver T. , Schwan Carsten , Grosse Robert 
Published: November 2019

AbstractAlthough the properties of the actin cytoskeleton in the cytoplasm are well characterized, the regulation and function of nuclear actin filaments are only recently emerging. We previously demonstrated serum-induced, transient assembly of filamentous actin within somatic cell nuclei. However, the extracellular cues, cell surface receptors as well as underlying signaling mechanisms have been unclear. Here we demonstrate that physiological ligands for G protein-coupled receptors (GPCRs) promote nuclear F-actin assembly via heterotrimeric Gαq proteins. Signal-induced nuclear actin responses require calcium release from the endoplasmic reticulum (ER) targeting the ER-associated formin INF2 at the inner nuclear membrane (INM). Notably, calcium signaling promotes the polymerization of linear actin filaments emanating from the INM towards the nuclear interior. We show that GPCR and calcium elevations trigger nuclear actin-dependent alterations in chromatin organization, uncovering a general cellular mechanism by which physiological ligands and calcium promote nuclear F-actin assembly for rapid responses towards chromatin dynamics.
Asian monsoon rainfall variation during the Pliocene forced by global temperature change
Authors: Wang Hanlin , Lu Huayu , Zhao Lin , Zhang Hongyan , Lei Fang , Wang Yichao 
Published: November 2019

AbstractThe Asian monsoon variations under global temperature changes during the Pliocene are still debated. Here we use a sedimentary record of phytoliths (plant silica) from the Weihe Basin, central China, to explore the history of C4 grasses and quantitatively reconstruct the Asian monsoon climate since the late Miocene. Our results show that C4 grasses have been a dominant grassland component since ~11.0 Ma. A subsequent marked decrease in warm- and humid-adapted C4 grasses and an increase in cool- and dry-adapted C3 grasses occurred in the Pliocene, ~4.0 Ma; the phytolith-based quantitative reconstruction of mean annual precipitation marked a decrease from 800~1673 mm to 443~900 mm, indicating a reduction in Asian monsoon rainfall in the Pliocene. Our newly obtained records conflict with the hypothesis that the growth of the Tibetan Plateau strengthened the Asian monsoon rainfall. Nevertheless, they emphasize the importance of global temperature as a determinant of Pliocene Asian monsoon variations.
Personalised analytics for rare disease diagnostics
Authors: Anderson Denise , Baynam Gareth , Blackwell Jenefer M. , Lassmann Timo 
Published: November 2019

AbstractWhole genome and exome sequencing is a standard tool for the diagnosis of patients suffering from rare and other genetic disorders. The interpretation of the tens of thousands of variants returned from such tests remains a major challenge. Here we focus on the problem of prioritising variants with respect to the observed disease phenotype. We hypothesise that linking patterns of gene expression across multiple tissues to the phenotypes will aid in discovering disease causing variants. To test this, we construct classifiers that learn associations between tissue-specific gene expression and disease phenotypes. We find that using Genotype-Tissue Expression project (GTEx) expression data in conjunction with disease agnostic variant prioritisation methods (CADD or MetaSVM) results in consistent improvements in classification accuracy. Our method represents a previously overlooked avenue of utilising existing expression data for clinical diagnostics, and also opens the door to use of other functional genomic data sets in the same manner.
Atomistic simulations shed new light on the activation mechanisms of RORγ and classify it as Type III nuclear hormone receptor regarding ligand-binding paths
Authors: Saen-Oon Suwipa , Lozoya Estrella , Segarra Victor , Guallar Victor , Soliva Robert 
Published: November 2019

AbstractThe molecular recognition of the RORγ nuclear hormone receptor (NHR) ligand-binding domain (LBD) has been extensively studied with numerous X-ray crystal structures. However, the picture afforded by these complexes is static and does not fully explain the functional behavior of the LBD. In particular, the apo structure of the LBD seems to be in a fully active state, with no obvious differences to the agonist-bound structure. Further, several atypical in vivo inverse agonists have surprisingly been found to co-crystallize with the LBD in agonist mode (with co-activator), leading to a disconnection between molecular recognition and functional activity. Moreover, the experimental structures give no clues on how RORγ LBD binders access the interior of the LBD. To address all these points, we probe here, with a variety of simulation techniques, the fine structural balance of the RORγ LBD in its apo vs. holo form, the differences in flexibility and stability of the LBD in complex with agonists vs. inverse agonists and how binders diffuse in and out of the LBD in unbiased simulations. Our data conclusively point to the stability afforded by the so-called “agonist lock” between H479 and Y502 and the precise location of Helix 12 (H12) for the competence of the LBD to bind co-activator proteins. We observe the “water trapping” mechanism suggested previously for the atypical inverse agonists and discover a different behavior for the latter when co-activator is present or absent, which might help explain their conflicting data. Additionally, we unveil the same entry/exit path for agonists and inverse agonist into and out of the LBD for RORγ, suggesting it belongs to the type III NHR sub-family.
The impact of multiple climatic and geographic factors on the chemical defences of Asian toads (Bufo gargarizans Cantor)
Authors: Cao Yueting , Cui Keke , Pan Hongye , Wu Jiheng , Wang Longhu 
Published: November 2019

AbstractChemical defences are widespread in nature, yet we know little about whether and how climatic and geographic factors affect their evolution. In this study, we investigated the natural variation in the concentration and composition of the main bufogenin toxin in adult Asian toads (Bufo gargarizans Cantor) captured in twenty-two regions. Moreover, we explored the relative importance of eight climatic factors (average temperature, maximum temperature, minimum temperature, average relative humidity, 20–20 time precipitation, maximum continuous precipitation, maximum ground temperature, and minimum ground temperature) in regulating toxin production. We found that compared to toads captured from central and southwestern China, toads from eastern China secreted higher concentrations of cinobufagin (CBG) and resibufogenin (RBG) but lower concentrations of telocinobufagin (TBG) and cinobufotalin (CFL). All 8 climatic variables had significant effects on bufogenin production (ri>0.5), while the plastic response of bufogenin toxin to various climate factors was highly variable. The most important climatic driver of total bufogenin production was precipitation: the bufogenin concentration increased with increasing precipitation. This study indicated that the evolution of phenotypic plasticity in chemical defences may depend at least partly on the geographic variation of defensive toxins and their climatic context.
Specific metallo-protein interactions and antimicrobial activity in Histatin-5, an intrinsically disordered salivary peptide
Authors: McCaslin Tyler G. , Pagba Cynthia V. , Yohannan Jiby , Barry Bridgette A. 
Published: November 2019

AbstractHistatin-5 (Hst-5) is an antimicrobial, salivary protein that is involved in the host defense system. Hst-5 has been proposed to bind functionally relevant zinc and copper but presents challenges in structural studies due to its disordered conformation in aqueous solution. Here, we used circular dichroism (CD) and UV resonance Raman (UVRR) spectroscopy to define metallo-Hst-5 interactions in aqueous solution. A zinc-containing Hst-5 sample exhibits shifted Raman bands, relative to bands observed in the absence of zinc. Based on comparison to model compounds and to a family of designed, zinc-binding beta hairpins, the alterations in the Hst-5 UVRR spectrum are attributed to zinc coordination by imidazole side chains. Zinc addition also shifted a tyrosine aromatic ring UVRR band through an electrostatic interaction. Copper addition did not have these effects. A sequence variant, H18A/H19A, was employed; this mutant has less potent antifungal activity, when compared to Hst-5. Zinc addition had only a small effect on the thermal stability of this mutant. Interestingly, both zinc and copper addition shifted histidine UVRR bands in a manner diagnostic for metal coordination. Results obtained with a K13E/R22G mutant were similar to those obtained with wildtype. These experiments show that H18 and H19 contribute to a zinc binding site. In the H18A/H19A mutant the specificity of the copper/zinc binding sites is lost. The experiments implicate specific zinc binding to be important in the antimicrobial activity of Hst-5.
Methane and Nitrous Oxide Flux after Biochar Application in Subtropical Acidic Paddy Soils under Tobacco-Rice Rotation
Authors: Huang Yibin , Wang Chengji , Lin Cheng , Zhang Yushu , Chen Xi , Tang Lina , Liu Cenwei , Chen Qingrong , Onwuka Mabel Ifeoma , Song Tieying 
Published: November 2019

AbstractBiochar amendment is a good means of mitigating methane (CH4) and nitrous oxide (N2O) emissions. However, the effects of biochar amendment on N2O and CH4 reduction in soil under rotation with different soil moisture contents is not well understood. To understand CH4 and N2O flux from soil with biochar amendment under water-unsaturated and water-saturated conditions, a field experiment was conducted in a tobacco-rice rotation field in subtropical China to investigate N2O and CH4 emissions following soil amendment with tobacco straw biochar at rates of 0, 10, 40 and 80 t·ha−1 (B0, B10, B40 and B80, respectively). N2O and CH4 emissions were monitored by a closed-chamber method in the water-unsaturated tobacco (UT) and water-saturated rice (SR) seasons during the 2015 planting season. The soil pH increased from 5.4 in the control to 6.1 in the soil amended with biochar at 80 t·ha−1 in the UT season. During both the UT and SR seasons, with biochar amendment at 40 and 80 t·ha−1, the soil bulk density (BD) decreased, while the soil organic matter (SOM) and available potassium (Av. K) contents increased. N2O flux was significantly greater in UT than in SR in the controls but decreased with the application of biochar during both the UT and SR seasons. The cumulative CH4 emission decreased with the rate of biochar application and the methanotroph pmoA gene copy number in soils and increased with the methanogenic archaea 16Sr DNA gene copy number in soils during the rice-cropping season. These results indicated that biochar amendment could decrease methanogenic archaea and increase of methanotroph pmoA gene, which are the mechanistic origin for CH4 reduction.