bluuebunny/crossref_metadata_2025_split huggingface dataset:
FINE STRUCTURE MAPPING OF THE am (GDH) LOCUS OF NEUROSPORA
Authors: Rambosek John A , Kinsey John A 
Published: January 2021

ABSTRACT
Utilizing a combination of flanking marker analysis and deletion mapping we have constructed a fine structure map of the am locus which includes 63 point mutants and ten unique deletions. Positions of point mutants can be rapidly assigned to one of 13 segments within the gene on the basis of crosses to nine deletion strains.
ROLE OF BIASED GENE CONVERSION IN ONE-LOCUS NEUTRAL THEORY AND GENOME EVOLUTION
Authors: Walsh James Bruce 
Published: January 2021

ABSTRACT
The implications of biased gene conversion acting on selectively neutral alleles are investigated for a single diallelic locus in a finite population. Even a very slight conversion bias can significantly alter fixation probabilities. We argue that most newly arising mutants will be at a conversion disadvantage, resulting in a potentially greatly decreased substitution rate of new alleles compared with predictions from strict neutral theory. Thus, conversion bias potential allows for conservation of particular alleles without having to invoke selection. Conversely, we also show that bias can be important in the maintenance of repeated gene families without altering the substitution rate at other loci that experience the same amount of conversion bias, provided that the number of genes in the family is sufficiently large. Bias can, therefore, be important at the genomic level and yet be unimportant at the populational level. Finally, we discuss the role of biased gene conversion in speciation events, concluding that this type of molecular turnover acting independently at many individual loci is very unlikely to decrease the time required for two allopatric populations to speciate.
ENHANCED GENE CONVERSION AND POSTMEIOTIC SEGREGATION IN PACHYTENE-ARRESTED SACCHAROMYCES CEREVISIAE
Authors: Davidow Lance S , Byers Breck 
Published: January 2021

ABSTRACT
Previous study has demonstrated that incubation of yeast cells of strain AP-1 in sporulation medium at 36° permits them to begin meiosis but that they become arrested at pachytene and undergo enhanced intragenic recombination between ade2 heteroalleles. Tetrad analysis was undertaken to characterize the altered program of meiotic recombination more widely. In one set of experiments, pachytene-arrested cells were permitted to resume sporulation upon transfer to the permissive temperature. In the resulting asci, both postmeiotic segregation and gene conversion were increased several-fold at a number of loci relative to unarrested controls, whereas reciprocal recombination increased two- to threefold. Another set of experiments analyzed the genetic consequences of inducing the pachytene-arrested cells to revert directly to mitotic growth without completion of meiosis. The appearance of homozygous sectors from heterozygous markers revealed that these cells had become committed to appreciable recombination but that reciprocal exchange was less frequent than in normal asci. Taken together, the data indicate that pachytene arrest rendered the cells committed to enhanced recombination upon resumption of sporulation but that most of the crossing over did not occur until release from the arrest. —The genetic basis of pachytene arrest by AP-1 was investigated by mating each of its parents with progeny of strain Y55, which is able to sporulate at 36°. Both of these diploids sporulated at 36°, and asci from the one studied further exhibited 2:2 segregation of the sporulation defect, indicating that pachytene arrest is dependent on a recessive, temperature-sensitive allele at a chromosomal locus.
MEASURING GENE FLOW AMONG POPULATIONS HAVING HIGH LEVELS OF GENETIC FRAGMENTATION
Authors: Larson Allan , Wake David B , Yanev Kay P 
Published: January 2021

ABSTRACT
We present an analysis of the genetic structures of 22 species of salamanders, with regard to levels of gene flow among populations. We estimate the gene flow parameter, Nm (the product of the effective population number and rate of migration among populations) using two alternative methods described by Wright and Slatkin. For most species, these two methods give approximately congruent estimates of Nm; when estimates differ, the method of Wright produces values slightly larger than those derived by the method of Slatkin. We analyze these results in light of independently derived historical inferences of the fragmentation of populations. This analysis suggests that the Nm values calculated from protein polymorphisms may contain information more relevant to historical patterns of gene exchange than to the current population dynamics; moderately large values of Nm may be calculated for species containing populations known to be no longer exchanging genes. Application of a method for estimating the maximum possible rate of gene exchange among populations indicates that, for most species studied here, gene flow among populations probably is no greater than the mutation rate. We suggest that most plethodontid species cannot be viewed as units whose cohesion is maintained by continuing gene exchange. Furthermore, we suggest that phenotypic uniformity among populations is not easily explained by hypotheses of continual stabilizing selection and propose that future work concentrate upon clarification of the genetic and epigenetic factors conferring self-maintenance or autopoietic properties on living systems.
MONOZYGOTIC VS. DIZYGOTIC TWIN BEHAVIOR IN ARTIFICIAL MOUSE TWINS
Authors: Baunack E , Falk U , Gärtner K 
Published: January 2021

ABSTRACT
Adult inbred mice of an isogenic strain (AKR/NHan or C57BL/6J Han) differ in social (sexual and agonistic), emotional and psychomotoric behavior, depending on the kind of manipulation to which they were subjected at an early ontogenetic stage. Monozygotic twins (MZT) from eight-cell stages halved and transferred to uterine foster mothers were compared with dizygotic twins (DZT) from nonreduced but transferred eight-cell stages and with naturally born animals (NBA). Generally, early embryonic conditions predict the behavioral characteristics of the adult animals to a high degree. The MZT are motorially less active, less emotional, less aggressive and less socially interested than DZT and NBA. In tests of spontaneous social behavior (allogrooming, anogenital licking, mounting, fighting), as well as in tests for emotionality (open field: crossed fields and defecation), these behavioral patterns occurred less frequently in MZT than in DZT; the NBA were mostly intermediate. The copulatory pattern of male MZT differs from that of male DZT by a shortage of intromission latency and duration; furthermore, MZT pairs do not build up a steady rank order in competitive copulation tests, as opposed to DZT and NBA pairs. In a test for psychomotoric behavior (swimming), the MZT prefer "floating" as a survival strategy, wheras the DZT and NBA prefer "adult swimming." Therefore, it can be concluded that these behavioral differences may be caused by the particular psychosocial environment in which the twins grow up or may be due to early prenatal peculiarities, such as inadequate synchronization of the developmental status of uterus and embryo.
STABLE AND UNSTABLE MUTATIONS IN ABERRANT RATIO STOCKS OF MAIZE
Authors: Mottinger John P , Dellaporta Stephen L , Keller Patrick B 
Published: January 2021

ABSTRACT
Aberrant Ratio (AR) stocks of maize were tested for transposition activity. Lines exhibiting AR and homozygous for the dominant alleles at the Sh Bz and Wx loci in the short arm of chromosome 9 were crossed as males to a sh bz wx tester. Among a population of 346,201 kernels, eight mutations of sh and two of bz were recovered. Eight of the ten mutations survived and none was as vigorous as its normal sibs. At least five of the sh mutants appear to be unstable in F2 and subsequent generations. An unexpected observation was the high incidence of somatic loss of chromosome 9 markers (Sh Bz and Wx), indicating chromosome breakage or nondisjunction. Southern blot hybridization analysis of the sh alterations indicate that all but one mutant are associated with structural DNA rearrangements at the shrunken locus. Possible mechanisms by which these alterations arose are discussed.
DIFFERENT FREQUENCY IN THE RECOVERY OF CROSSOVER PRODUCTS FROM MALE AND FEMALE GAMETES OF PLANTS HYPOPLOID FOR B-A TRANSLOCATIONS IN MAIZE
Authors: Robertson D S 
Published: January 2021

ABSTRACT
The percentage of crossovers is consistently higher in plants hypoploid for six B-A translocations when crossed as males than when crossed as females; in most instances, this excess of male crossing over exceeds that found in control crosses (involving normal chromosomes). Thus, there seems to be something about the hypoploid condition that is responsible for the higher percentage of male crossovers. Several explanations for this "hypoploid effect" are possible, but none has been demonstrated to be responsible for the phenomenon.
PRIMARY TRISOMICS OF RICE: ORIGIN, MORPHOLOGY, CYTOLOGY AND USE IN LINKAGE MAPPING
Authors: Khush G S , Singh R J , Sur S C , Librojo A L 
Published: January 2021

ABSTRACT
Twelve primary trisomics of Oryza sativa L. were isolated from the progenies of spontaneous triploids and were transferred by backcrossing to the genetic background of IR36, a widely grown high yielding rice variety. Eleven trisomics can be identified morphologically from one another and from diploids. However, triplo 11 is difficult to distinguish from diploid sibs.—The extra chromosome of each trisomic was identified cytologically at pachytene stage of meiosis, and the chromosomes were numbered according to their length at this stage. The major distinguishing features of each pachytene chromosome were redescribed.—The female transmission rates varied from 15.5% for triplo 1, the longest chromosome, to 43.9% for triplo 12, the shortest chromosome. Seven of the 12 primary trisomics transmitted the extra chromosome through the male. The low level of chromosomal imbalance tolerated by rice and other evidence are interpreted to indicate that this species is a basic diploid.—Genetic segregation for 22 marker genes in the trisomic progenies was studied. Of a possible 264 combinations, involving 22 genes and 12 trisomics, 120 were examined. Marker genes for each of the 12 chromosomes were identified. The results helped establish associations between linkage groups and cytologically identifiable chromosomes of rice for the first time. Relationships between various systems of numbering chromosomes, trisomics, linkage groups and marker genes are described, and a revised linkage map of rice is presented.
A SUPPRESSOR OF snf1 MUTATIONS CAUSES CONSTITUTIVE HIGH-LEVEL INVERTASE SYNTHESIS IN YEAST
Authors: Carlson Marian , Osmond Barbara C , Neigeborn Lenore , Botstein David 
Published: January 2021

ABSTRACT
The SNF1 gene product of Saccharomyces cerevisiae is required to derepress expression of many glucose-repressible genes, including the SUC2 structural gene for invertase. Strains carrying a recessive snf1 mutation are unable to ferment sucrose. We have isolated 30 partial phenotypic revertants of a snf1 mutant that were able to ferment sucrose. Genetic characterization of these revertants showed that the suppressor mutations were all recessive and defined eight complementation groups, designated ssn1 through ssn8 (suppressor of snf1). The revertants were assayed for secreted invertase activity, and although activity was detected in members of each complementation group, only the ssn6 strains contained wild-type levels. Synthesis of secreted invertase in ssn6 strains was found to be constitutive, that is, insensitive to glucose repression; moreover, the ssn6 mutations also conferred constitutivity in a wild-type (SNF1) genetic background and are, therefore, not merely suppressors of snf1. Pleiotropic defects were observed in ssn6 mutants. Genetic analysis suggested that the ssn6 mutations are allelic to the cyc8 mutation isolated by R. J. Rothstein and F. Sherman, which causes increased production of iso-2-cytochrome c. The data suggest a regulatory function for SSN6.
GENETIC EVIDENCE FOR PHYSICAL INTERACTIONS BETWEEN ENZYMES OF NUCLEOTIDE SYNTHESIS AND PROTEINS INVOLVED IN DNA REPLICATION IN BACTERIOPHAGE T4
Authors: Macdonald Paul M , Hall Dwight H 
Published: January 2021

ABSTRACT
We have found that mutations in phage T4 genes 41 (five of five) and 61 (three of three) cause resistance to the folate analogue pyrimethamine that inhibits T4 dihydrofolate (FH2) reductase. These genes code for subunits of a T4 primase and are part of a putative T4 replication complex. In contrast to many previously isolated folate analogue-resistant (Far) T4 mutants, these T4 primase mutants do not overproduce FH2 reductase nor do they alter its primary structure. A new mutant with a single lesion in gene 41 was isolated which proved resistant to the folate analogue at 30° and was lethal at 42°. This mutant induced normal levels of FH2 reductase (encoded by the frd gene) and appeared to have normal expression of other T4 genes at 30°. Like other mutations in gene 41, tsP129 reduced phage-induced DNA synthesis to about 15% that of wild-type T4 as measured by thymidine incorporation under restrictive conditions. Double mutants carrying mutations in genes 41 and 61, 41 and frd or 61 and frd showed allele-specific suppression suggesting that the products of these genes interact. We suggest that abnormal interactions between components of the replication complex and a DNA precursor synthesizing complex cause folate analog resistance by allosterically altering the T4 FH2 reductase.
COINCIDENT GENE CONVERSION DURING MITOSIS IN SACCHAROMYCES
Authors: Golin John E , Esposito Michael S 
Published: January 2021

ABSTRACT
During mitosis, gene conversion events at the TRP5 locus on chromosome VII are coupled with conversion events at LEU1, a locus 18 cM away, 1200 times more frequently than would be expected for two independent acts of recombination. Such coincident conversion events that occur over relatively long distances could be due to several mechanisms. We discuss these possibilities and describe an experiment that indicates that a portion of coincident events is due to extensive heteroduplexes. The phenomenon of coincident gene conversion is discussed in relation to our earlier evidence that spontaneous recombination between homologues occurs prereplicationally in mitosis.
RECOMBINATION BETWEEN COMPONENTS OF A MUTABLE GENE SYSTEM IN MAIZE
Authors: Kermicle Jerry L 
Published: January 2021

ABSTRACT
An unstable component (I-R) of the R-stippled allele interacts with a linked modifier which enhances stippled's expression (M-st) to delete the intervening segment. The precision of deletion formation suggests a recombinational basis, specifically unequal crossing over between I-R and M-st. Four deletions were selected as losses of R function from plants homozygous for R-st and M-st. Also lost are stippled's near-colorless seed phenotype, its paramutagenicity and a closely linked gene, Inhibitor of striate. The deletion chromosomes, missing a 6-cM segment, are transmitted normally by ovules but in reduced frequency by pollen. Homozygous and heteroallelic combinations of the deletions confer defective seed lethality. The four did not differ detectably in transmissibility or breakpoint termini. The recurrence of deletions that have the same termini is explained by recombination between I-R and M-st. The homology between M-st and I-R, and their presence in the same chromosome arm, favors the view that M-st originated by I-R transposition.
MECHANISM OF IS1 TRANSPOSITION IN E. COLI: CHOICE BETWEEN SIMPLE INSERTION AND COINTEGRATION
Authors: Biel Susan W , Berg Douglas E 
Published: January 2021

ABSTRACT
nsertion element IS 1 and IS 1-based transposon Tn 9 generate cointegrates (containing vector and target DNAs joined by duplicate copies of IS 1 or Tn 9) and simple insertions (containing IS 1 or Tn 9 detached from vector sequences). Based on studies of transposon Tn 5 we had proposed a conservative (non-replicative) model for simple insertion. Others had proposed that all transposition is replicative, occurring in a rolling circle structure, and that the way DNA strands are joined when replication terminates determines whether a simple insertion or a cointegrate is formed.—We selected for the transposition of amp and cam resistance markers from pBR322::Tn 9 plasmids to an F factor in recA - E. coli and identified products containing three and four copies of IS 1, corresponding to true cointegrates (from monomeric plasmids), and simple insertions (from dimeric plasmids). The simple insertions with four copies of IS 1 outnumbered those with three by a ratio of about 3:1, whereas true cointegrates containing three copies of IS 1 were more numerous than those with four.—A straightforward rolling circle model had predicted that the simple insertions containing three copies of IS 1 should be more frequent than those with four. Because we obtained the opposite result we propose that simple insertions only arise when the element fails to replicate or if replication starts but then terminates prematurely. The two classes of products, simple insertions and cointegrates, reflect alternative conservative and replicative fates, respectively, of an early intermediate in transposition.
HETEROCHROMATIC POSITION EFFECT AT THE ROSY LOCUS OF DROSOPHILA MELANOGASTER: CYTOLOGICAL, GENETIC AND BIOCHEMICAL CHARACTERIZATION
Authors: Rushlow C A , Chovnick A 
Published: January 2021

ABSTRACT
This report describes cytological, genetic and biochemical studies designed to characterize two Υ-radiation induced, apparent "underproducer" variants of the rosy locus (ry:3-52.0), ryps 1149 and ryps 11136. The following observations provide a compelling basis for their diagnosis as heterochromatic position effect variants. (1) They are associated with rearrangements that place heterochromatin adjacent to the rosy region of chromosome 3 (87D). (2) The effect of these mutations on rosy locus expression is subject to modification by abnormal Y chromosome content. (3) The rearrangement alters only the expression of the rosy allele on the same chromosome (cis-acting). (4) The Y chromosome modification is only on the position-affected allele's expression. (5) The recessive lethality associated with the rearrangements relate to specific rosy region vital loci, and for ryps 11136, the lethality is not Y chromosome modified. (6) The peptide product of the position-affected allele is qualitatively normal by several criteria. (7) Heterozygous deletion of 87E2-F2 is a suppressor of the rosy position effect. (8) The rosy position effect on XDH production may be assayed in whole larvae and larval fat body tissue as well as in adults.
THE MOLECULAR BASIS OF GENETIC DIVERSITY AMONG CYTOPLASMS OF TRITICUM AND AEGILOPS. III. CHLOROPLAST GENOMES OF THE M AND MODIFIED M GENOME-CARRYING SPECIES
Authors: Terachi T , Ogihara Y , Tsunewaki K 
Published: January 2021

ABSTRACT
The restriction fragment patterns of chloroplast DNAs of all M or modified M genome-carrying Aegilops species, and those of common wheat (Triticum aestivum), Ae. umbellulata and Ae. squarrosa as referants, have been analyzed using eight restriction endonucleases, BamHI, Eco RI, Hin dIII, Kpn I, Pst I, Sal I, Sma I and Xho I. Nine distinctly different chloroplast genomes are evident, and the mutual relatedness among them is estimated based on the number of different restriction fragments. The results lead to the following conclusions. (1) Chloroplast genomes of three Comopyrum species, Ae. comosa, Ae. heldreichii and Ae. uniaristata, are more closely related with each other and are greatly different from those of the Amblyopyrum species, Ae. mutica, and of Ae. umbellulata and Ae. squarrosa. (2) Ae. crassa's chloroplast genome lies at the center of chloroplast genome diversification, whereas those of common wheat, Ae. squarrosa and Ae. uniaristata are three extreme forms lying far from the center. (3) Chloroplast genomes of three 4x species, Ae. biuncialis, Ae. columnaris and Ae. triaristata, arose from Ae. umbellulata, and that of a fourth 4x species, Ae. ventricosa, arose from Ae. squarrosa. The chloroplast origins of two other 4x species, Ae. ovata and Ae. crassa, remain unsolved. (4) The chloroplast genomes of two Ae. mutica strains are identical, even though their cytoplasms exert quite different effects on male fertility, heading date and growth vigor of common wheat.
THE SELECTIVE VALUE OF ALLELES UNDERLYING POLYGENIC TRAITS
Authors: Lynch Michael 
Published: January 2021

ABSTRACT
To define the genetic and ecological circumstances that are conductive to evolution via genetic drift at the allelic level, the selection coefficient for a constituent allele of arbitrary effect is derived for a polygenic character exposed to stabilizing selection. Under virtually all possible conditions, alleles within the class for which the absolute value of the average effect is &lt;10-2 phenotypic standard deviations are neutral with respect to each other. In addition, when the mean phenotype is at the optimum and the genetic variance is in selection-drift-mutation equilibrium, a considerable amount of neutral evolution is expected in the class of alleles with intermediate effects on the phenotype. These results help clarify how molecular evolution via genetic drift may occur at a locus despite intense selection and provide a potential mechanistic explanation for the neutral theory of molecular evolution.
MERODIPLOIDY IN ESCHERICHIA COLI-SALMONELLA TYPHIMURIUM CROSSES: THE ROLE OF UNEQUAL RECOMBINATION BETWEEN RIBOSOMAL RNA GENES
Authors: Lehner Andreas F , Hill C W 
Published: January 2021

ABSTRACT
Previous workers have shown that intergeneric crosses between Salmonella typhimurium and Escherichia coli produce a high proportion of merodiploid recombinants among the viable progeny. We have examined the unequal crossover event that was responsible for a number of intergeneric merodiploids. The merodiploids that we studied were all heterozygous for the metB–argH interval and were the products of intergeneric conjugal crosses. We found that when the S. typhimurium donor had its transfer origin closely linked to metB and argH, all recombinants examined were merodiploid, and they generally arose as F-prime factors. Many of these F-prime factors had been created by recombination between flanking rrn genes in the donor. When the S. typhimurium Hfr transfer origin was more distant from the selected markers, quite different results were obtained. (1) Depending on the donor, 19–47% of the recombinants that acquired the donor argH + or metB + genes were merodiploid for these loci, but none of the recombinants were F-prime. (2) A majority of the merodiploids had a novel (nonparental) rrn gene, indicating that unequal recombination between nonidentical rrn genes was a prevalent mechanism for establishing the merodiploidy. (3) Both tandem and nontandem duplications were found. (4) Some of the merodiploids duplicated E. coli genes in addition to acquiring S. typhimurium genes. (5) Some merodiploids contained the oriC region from each parent. Of a total of 118 intergeneric merodiploids characterized from all donors, 48 different genotypes were observed, and 38 of the 48 had one or more nonparental rrn operons.