bluuebunny/crossref_metadata_2025_split huggingface dataset:
Exposure to the natural alkaloid Berberine affects cardiovascular system morphogenesis and functionality during zebrafish development
Authors: Martini Davide , Pucci Cecilia , Gabellini Chiara , Pellegrino Mario , Andreazzoli Massimiliano 
Published: October 2020

AbstractThe plant-derived natural alkaloid berberine displays therapeutic potential to treat several pathological conditions, including dyslipidemias, diabetes and cardiovascular disorders. However, data on berberine effects during embryonic development are scarce and in part controversial. In this study, using zebrafish embryos as vertebrate experimental model, we address the effects of berberine treatment on cardiovascular system development and functionality. Starting from the observation that berberine induces developmental toxicity and pericardial edema in a time- and concentration-dependent manner, we found that treated embryos display cardiac looping defects and, at later stages, present an abnormal heart characterized by a stretched morphology and atrial endocardial/myocardial detachment. Furthermore, berberine affected cardiac functionality of the embryos, promoting bradycardia and reducing the cardiac output, the atrial shortening fraction percentage and the atrial stroke volume. We also found that, during development, berberine interferes with the angiogenic process, without altering vascular permeability. These alterations are associated with increased levels of vascular endothelial growth factor aa (vegfaa) mRNA, suggesting an important role for Vegfaa as mediator of berberine-induced cardiovascular defects. Altogether, these data indicate that berberine treatment during vertebrate development leads to an impairment of cardiovascular system morphogenesis and functionality, suggesting a note of caution in its use during pregnancy and lactation.
PGC-1β-expressing POMC neurons mediate the effect of leptin on thermoregulation in the mouse
Authors: Delezie Julien , Gill Jonathan F. , Santos Gesa , Karrer-Cardel Bettina , Handschin Christoph 
Published: October 2020

AbstractThe arcuate nucleus (ARC) of the hypothalamus is a key regulator of food intake, brown adipose tissue (BAT) thermogenesis, and locomotor activity. Whole-body deficiency of the transcriptional coactivator peroxisome proliferator-activated receptor γ (PPARγ) coactivator-1β (PGC-1β) disrupts mouse circadian locomotor activity and BAT-regulated thermogenesis, in association with altered gene expression at the central level. We examined whether PGC-1β expression in the ARC is required for proper energy balance and locomotor behavior by generating mice lacking the PGC-1β gene specifically in pro-opiomelanocortin (POMC) neurons. POMC neuron-specific deletion of PGC-1β did not impact locomotor behavior, food intake, body composition, energy fuel utilization and metabolic rate in fed, 24-h fasted and 24-h refed conditions. In contrast, in the fed state, deletion of PGC-1β in POMC cells elevated core body temperature during the nighttime period. Importantly, this higher body temperature is not associated with changes in BAT function and gene expression. Conversely, we provide evidence that mice lacking PGC-1β in POMC neurons are more sensitive to the effect of leptin on heat dissipation. Our data indicate that PGC-1β-expressing POMC neurons are part of a circuit controlling body temperature homeostasis and that PGC-1β function in these neurons is involved in the thermoregulatory effect of leptin.
Non-junctional role of Cadherin3 in cell migration and contact inhibition of locomotion via domain-dependent, opposing regulation of Rac1
Authors: Ichikawa Takehiko , Stuckenholz Carsten , Davidson Lance A. 
Published: October 2020

AbstractClassical cadherins are well-known adhesion molecules responsible for physically connecting neighboring cells and signaling this cell–cell contact. Recent studies have suggested novel signaling roles for “non-junctional” cadherins (NJCads); however, the function of cadherin signaling independent of cell–cell contacts remains unknown. In this study, mesendodermal cells and tissues from gastrula stage Xenopus laevis embryos demonstrate that deletion of extracellular domains of Cadherin3 (Cdh3; formerly C-cadherin in Xenopus) disrupts contact inhibition of locomotion. In both bulk Rac1 activity assays and spatio-temporal FRET image analysis, the extracellular and cytoplasmic Cdh3 domains disrupt NJCad signaling and regulate Rac1 activity in opposing directions. Stabilization of the cytoskeleton counteracted this regulation in single cell migration assays. Our study provides novel insights into adhesion-independent signaling by Cadherin3 and its role in regulating single and collective cell migration.
Improvement of light penetration in biological tissue using an ultrasound-induced heating tunnel
Authors: Hsieh Zong-Han , Fan Ching-Hsiang , Ho Yi-Ju , Li Meng-Lin , Yeh Chih-Kuang 
Published: October 2020

AbstractThe major obstacles of optical imaging and photothermal therapy in biomedical applications is the strong scattering of light within biological tissues resulting in light defocusing and limited penetration. In this study, we propose high intensity focused ultrasound (HIFU)-induced heating tunnel to reduce the photon scattering. To verify our idea, Monte Carlo simulation and intralipid-phantom experiments were conducted. The results show that the thermal effect created by HIFU could improve the light fluence at the targeted region by 3% in both simulation and phantom experiments. Owing to the fluence increase, similar results can also be found in the photoacoustic experiments. In conclusion, our proposed method shows a noninvasive way to increase the light delivery efficiency in turbid medium. It is expected that our finding has a potential for improving the focal light delivery in photoacoustic imaging and photothermal therapy.
Characterization and properties of hybrid foams from nanocellulose and kaolin-microfibrillated cellulose composite
Authors: González-Ugarte Alina S. , Hafez Islam , Tajvidi Mehdi 
Published: October 2020

AbstractHybrid nanocellulose-based foams are a desirable class of low-density and porous materials for their potential in many applications. This study aims at characterizing and understanding the structure-properties relationship of four foam formulations prepared from combinations of cellulose nanofibrils (CNF), cellulose nanocrystals (CNC), and kaolin-microfibrillated cellulose composite. All the foams were crosslinked with a polyamide-epichlorohydrin crosslinker (Polycup) to impart stability under wet conditions without additional functionalization. Foams containing 25 wt% kaolin exhibited excellent shape recovery promoted by a higher load of crosslinker (5 wt%), and superior compressive properties. The addition of CNC at 33.3 wt% and 50 wt% did not seem to enhance the properties of the foam and also reduced the specific surface area. A preliminary comparative study between the four tested formulations was conducted to assess the feasibility of the foam as an adsorbent of methylene blue dye.
Association of cancer screening and residing in a coal-polluted East Asian region with overall survival of lung cancer patients: a retrospective cohort study
Authors: Yang Runxiang , He Ming , Wang Dongmei , Ye Rongrong , Li Lu , Deng Rouyu , Shah Mohsin , Yeung Sai-Ching Jim 
Published: October 2020

AbstractLung cancer is the leading cause of cancer death worldwide. The Xuanwei-Fuyuan (XF) region of Yunnan, China has a high incidence of lung cancer from coal-related pollution. Effort to raise public awareness screening for lung cancer has been ongoing. We retrospectively analyzed overall survival (OS) of lung cancer patients of a tertiary cancer center in Yunnan to investigate screening and regional residential status as predictive factors. Consecutive cases of newly diagnosed lung cancer were reviewed. The lung cancer cases diagnosed by screening were more likely to be early-staged and treated by surgery than those diagnosed not by screening. In patients diagnosed not by screening, XF residential status was a significant predictor of improved OS. Frailty model detected significant heterogeneity associated with region of residence in unscreened patients. Potential biases associated with screening were examined by Monte Carlo simulations and sensitivity analyses. Focused effort in cancer screening and increased public awareness of pollution-related lung cancer in XF might have led to early diagnosis and improved OS, and increased investment in health care resources in high risk areas may have produced additional unobserved factors that underlay the association of XF residential status with improved OS in patients diagnosed not by screening.
In vitro plant regeneration and Agrobacterium-mediated genetic transformation of a carnivorous plant, Nepenthes mirabilis
Authors: Miguel Sissi , Michel Cindy , Biteau Flore , Hehn Alain , Bourgaud Frédéric 
Published: October 2020

AbstractIn nutrient-poor habitats, carnivorous plants have developed novel feeding strategies based on the capture and digestion of prey and the assimilation of prey-derived nutrients by specialized traps. The Nepenthes genus, comprising nearly 160 species, presents a remarkable pitcher-shaped trap, leading to great interest among biologists, but the species of this genus are listed as threatened. In this work, we developed a protocol for reproducing Nepenthes mirabilis through shoot regeneration from calli. The cultivation of stem segments of N. mirabilis on MS medium containing thidiazuron induced organogenic calli after 10 weeks. Subcultured calli exposed to 6-benzylaminopurine showed shoot regeneration in 3 weeks with considerable yields (143 shoots/g of calli). Excised shoots transferred to medium with indole-3-butyric acid allowed rooting in 4 weeks, and rooted plantlets had a 100% survival rate. Based on this method, we also developed an Agrobacterium-mediated genetic transformation protocol using calli as explants and ipt as a positive method of selection. Twelve weeks post infection, regenerated shoots were observed at the surface of calli. Their transgenic status was confirmed by PCR and RT-PCR. In conclusion, this study provides an efficient method for regenerating Nepenthes and the first protocol for its stable genetic transformation, a new tool for studying carnivory.
A reconfigurable sandwich structure switchable DNA-based metamaterial
Authors: Zhong Min 
Published: October 2020

AbstractIn this paper, a tunable DNA-based metamaterial is designed and simulated in 170–340 THz range. This metamaterial can be transformed from an ON mode with a low resistance state of the DNA strip to its OFF mode with a high resistance state. Three Structures with containing different combinations metal layers are designed and simulated. Structure 1 with Ag/DNA/Ag and Au/DNA/Au strategies achieves field enhancement factors (FEF) 2.18 and 2.07, respectively. Structure 2 (Au/DNA/Dirac, Dirac/DNA/Au, Ag/DNA/Dirac, or Dirac/DNA/Ag) achieves the FEF values 14.11, 10.70, 13.75, or 9.62, respectively, while the FEF value of Structure 3 with Dirac/DNA/Dirac reaches 59.8. The FEF value of Structure 3 can be modulated from 59.8 to 91.96 as Fermi energy increasing from 0 to 60 meV. Moreover, the FEF value is also enhanced through increasing the magnetic field strength. The Structure 3 exhibits convertibility and sustainable modulation lines between two opposing patterns. The proposed structure reveals a switchable feature based on the resistance characteristics of DNA strips, which can be revealed as an ON/OFF switch sensor. Moreover, the switching performance of Structures 3 and 2 is significantly higher than Structure 1. Therefore, Structures 3 and 2 can be set to be an optical memristor or optical gate.
Anatomical MRI and [18F]FDG PET/CT imaging of Schistosoma mansoni in a NMRI mouse model
Authors: Lindner Tobias , Stenzel Jan , Koslowski Nicole , Hohn Alexander , Glass Änne , Schwarzenböck Sarah M. , Krause Bernd J. , Vollmar Brigitte , Reisinger Emil C. , Sombetzki Martina 
Published: October 2020

AbstractSchistosomiasis represents one of the most devastating worm parasitosis in the world. Current diagnostic methods are insufficient to determine the infection grade and the disease related organ damage. We herein investigated whether discrimination of infection grade and its correlation to liver damage could be accurately performed by multimodal imaging in a mouse model ofSchistosoma mansoniinfection. Therefore, groups of uninfected and infected mice underwent MRI and [18F]FDG PET/CT imaging. Anatomical MRI images were used for liver volumetry and for quantification of hepatic granulomas. For PET/CT images a volume of interest based analyses were employed to calculate the [18F]FDG uptake in liver, portal vein, spleen and abdomen. Herein, we demonstrate that the combined use of [18F]FDG-PET/CT and MRI represents an appropriate diagnostic tool forSchistosoma mansoniinfection, but fails to discriminate the infection grade and the linked organ damage. Only the splenic [18F]FDG uptake in the 25 cercariae group (5.68 ± 0.90%ID/cc) and 50 cercariae group (4.98 ± 1.43%ID/cc) was significantly higher compared to the control group (2.13 ± 0.69%ID/cc). Nevertheless, future multimodal imaging studies with new radiopharmaceuticals could build a highly sensitive and specific basis for the diagnosis and evaluation of organ damage of schistosomiasis.
The constraint of ignoring the subtidal water climatology in evaluating the changes of coralligenous reefs due to heating events
Authors: Ceccherelli Giulia , Pinna Federico , Pansini Arianna , Piazzi Luigi , La Manna Gabriella 
Published: October 2020

AbstractPredicting community-level responses to seawater warming is a pressing goal of global change ecologists. How far such predictions can be derived from a fine gradient of thermal environments needs to be explored, even if ignoring water climatology does not allow estimating subtidal marine heat waves. In this study insights about the influence of the thermal environment on the coralligenous community structure were gained by considering sites (Sardinia, Italy) at different temperature conditions. Heating events were measured (by loggers at 18 m, 23 m, 28 m, 33 m and 38 m deep) and proxies for their duration (the maximum duration of events warmer than the 90th percentile temperature), intensity (the median temperature) and variability (the number of daily ΔT larger than the mean daily ΔT, and the number of heating events larger in ΔT than the 90th percentile ΔT) were selected by GAM models. Reliable predictions of decrease in coralligenous richness of taxa/morphological groups, with relevant increment in turfs and encrusting coralline algae abundance at the expenses of bryozoans were made. Associations to the different types of heating descriptor have highlighted the aspect (intensity, duration or variability) of the heating events and the threshold for each of them responsible for the trajectories of change.
The genetic diversity and differentiation of mussels with complex life cycles and relations to host fish migratory traits and densities
Authors: Österling Martin , Lopes-Lima Manuel , Froufe Elsa , Hadzihalilovic Amra H. , Arvidsson Björn 
Published: October 2020

AbstractMany landscape and biotic processes shape the genetic structure of populations. The genetic structure of species with parasitic stages may also depend on the life history and ecology of their host. We investigated population genetic structure of the musselMargaritifera margaritiferain Southern Sweden, and in relation to the population size and life history of its hosts,Salmo truttaandS. salar. Mussel populations were genetically differentiated into two clusters, further subdivided into four clusters and distinct conservation units. Regardless of host species, the genetic differentiation was lower among mussel populations sustained by sea-migrating than by resident hosts, while the genetic diversity was higher in mussel populations sustained by sea-migrating than by resident hosts. Genetic diversity of mussel populations was positively related to host abundance. Mussel population size was positively related to high genetic diversity of mussels sustained by resident hosts, while low mussel population size sustained by sea-migrating hosts had a high genetic diversity. The results of our study suggest a combined influence of mussels and host fish on genetic structure of unionoid mussels. We suggest to conserve not only mussel population sizes and host fish species, but also consider host migratory/resident behaviour and abundance when designing conservation programs.
Clinical characteristics of “re-positive” discharged COVID-19 pneumonia patients in Wuhan, China
Authors: He Shengyang , Zhou Kefu , Hu Mengyun , Liu Chun , Xie Lihua , Sun Shenghua , Sun Wenwu , Chen Liangkai 
Published: October 2020

AbstractTo analyze the clinical characteristics of re-positive discharged COVID-19 patients and find distinguishing markers. The demographic features, clinical symptoms, laboratory results, comorbidities, co-infections, treatments, illness severities and chest CT scan results of 267 patients were collected from 1st January to 15th February 2020. COVID-19 was diagnosed by RT-PCR. Clinical symptoms and nucleic acid test results were collected during the 14 days post-hospitalization quarantine. 30 out of 267 COVID-19 patients were detected re-positive during the post-hospitalization quarantine. Re-positive patients could not be distinguished by demographic features, clinical symptoms, laboratory results, comorbidities, co-infections, treatments, chest CT scan results or subsequent clinical symptoms. However, re-positive rate was found to be correlated to illness severity, according the Acute Physiology and Chronic Health Evaluation II (APACHE II) severity-of-disease classification system, and the confusion, urea, respiratory rate and blood pressure (CURB-65) score. Common clinical characteristics were not able to distinguish re-positive patients. However, severe and critical cases classified high according APACHE II and CURB-65 scores, were more likely to become re-positive after discharge.
Cell-free DNA in plasma as an essential immune system regulator
Authors: Korabecna M. , Zinkova A. , Brynychova I. , Chylikova B. , Prikryl P. , Sedova L. , Neuzil P. , Seda O. 
Published: October 2020

AbstractThe cell-free DNA (cfDNA) is always present in plasma, and it is biomarker of growing interest in prenatal diagnostics as well as in oncology and transplantology for therapy efficiency monitoring. But does this cfDNA have a physiological role? Here we show that cfDNA presence and clearance in plasma of healthy individuals plays an indispensable role in immune system regulation. We exposed THP1 cells to healthy individuals’ plasma with (NP) and without (TP) cfDNA. In cells treated with NP, we found elevated expression of genes whose products maintain immune system homeostasis. Exposure of cells to TP triggered an innate immune response (IIR), documented particularly by elevated expression of pro-inflammatory interleukin 8. The results of mass spectrometry showed a higher abundance of proteins associated with IIR activation due to the regulation of complement cascade in cells cultivated with TP. These expression profiles provide evidence that the presence of cfDNA and its clearance in plasma of healthy individuals regulate fundamental mechanisms of the inflammation process and tissue homeostasis. The detailed understanding how neutrophil extracellular traps and their naturally occurring degradation products affect the performance of immune system is of crucial interest for future medical applications.
ATP synthase modulation leads to an increase of spare respiratory capacity in HPV associated cancers
Authors: Kirschberg Matthias , Heuser Sandra , Marcuzzi Gian Paolo , Hufbauer Martin , Seeger Jens Michael , Đukić Anamaria , Tomaić Vjekoslav , Majewski Slawomir , Wagner Steffen , Wittekindt Claus , Würdemann Nora , Klussmann Jens Peter , Quaas Alexander , Kashkar Hamid , Akgül Baki 
Published: October 2020

AbstractMucosal and skin cancers are associated with infections by human papillomaviruses (HPV). The manner how viral oncoproteins hijack the host cell metabolism to meet their own energy demands and how this may contribute to tumorigenesis is poorly understood. We now show that the HPV oncoprotein E7 of HPV8, HPV11 and HPV16 directly interact with the beta subunit of the mitochondrial ATP-synthase (ATP5B), which may therefore represent a conserved feature across different HPV genera. By measuring both glycolytic and mitochondrial activity we observed that the association of E7 with ATP5B was accompanied by reduction of glycolytic activity. Interestingly, there was a drastic increase in spare mitochondrial respiratory capacity in HPV8-E7 and an even more profound increase in HPV16-E7 expressing cells. In addition, we could show that ATP5B levels were unchanged in betaHPV positive skin cancers. However, comparing HPV-positive and HPV-negative oropharyngeal squamous cell carcinomas (OPSCC) we noticed that, while ATP5B expression levels did not correlate with patient overall survival in HPV-negative OPSCC, there was a strong correlation within the HPV16-positive OPSCC patient group. These novel findings provide evidence that HPV targets the host cell energy metabolism important for viral life cycle and HPV-mediated tumorigenesis.
β-SNAP activity in the outer segment growth period is critical for preventing BNip1-dependent apoptosis in zebrafish photoreceptors
Authors: Nishiwaki Yuko , Masai Ichiro 
Published: October 2020

AbstractBNip1, which functions as a t-SNARE component of the syntaxin18 complex, is localized on the ER membrane and regulates retrograde transport from Golgi to the ER. BNip1 also has a BH3 domain, which generally releases pro-apoptotic proteins from Bcl2-mediated inhibition. Previously we reported that retinal photoreceptors undergo BNip1-dependent apoptosis in zebrafish β-snap1 mutants. Here, we investigated physiological roles of BNip1-dependent photoreceptor apoptosis. First, we examined the spatio-temporal profile of photoreceptor apoptosis in β-snap1 mutants, and found that apoptosis occurs only during a small developmental window, 2–4 days-post-fertilization (dpf), in which an apical photoreceptive membrane structure, called the outer segment (OS), grows rapidly. Transient expression of β-SNAP1 during this OS growing period prevents photoreceptor apoptosis in β-snap1 mutants, enabling cone to survive until at least 21 dpf. These observations suggest that BNip1-mediated apoptosis is linked to excessive activation of vesicular transport associated with rapid growth of the OS. Consistently, knockdown of Ift88 and Kif3b, which inhibits protein transport to the OS, rescued photoreceptor apoptosis in β-snap1 mutants. Treatment with rapamycin, which inhibits protein synthesis via the mTOR pathway, also rescued photoreceptor apoptosis in β-snap1 mutants. These data suggest that BNip1 performs risk assessment to detect excessive vesicular transport in photoreceptors.