bluuebunny/crossref_metadata_2025_split huggingface dataset:
Porphyromonas gingivalis disrupts vascular endothelial homeostasis in a TLR-NF-κB axis dependent manner
Authors: Xie Mengru , Tang Qingming , Yu Shaoling , Sun Jiwei , Mei Feng , Zhao Jiajia , Chen Lili 
Published: September 2020

AbstractCardiovascular disease is still the leading cause of mortality worldwide. Vascular endothelial dysfunction is viewed as the initial step of most cardiovascular diseases. Many studies have indicated that periodontal pathogens, especially Porphyromonas gingivalis, are closely correlated with vascular endothelial homeostasis, but the function of P. gingivalis and the underlying mechanisms are still elusive. To illuminate the effects and elucidate the mechanisms of P. gingivalis on endothelial structural integrity, we developed P. gingivalis infection models in vivo and in vitro. Endothelial cell proliferation, differentiation and apoptosis were detected. Here, we showed that P. gingivalis can impair endothelial integrity by inhibiting cell proliferation and inducing endothelial mesenchymal transformation and apoptosis of endothelial cells, which reduce the cell levels and cause the endothelium to lose its ability to repair itself. A mechanistic analysis showed that TLR antagonist or NF-κB signalling inhibitor can largely rescue the damaged integrity of the endothelium caused by P. gingivalis, suggesting that TLR-NF-κB signalling plays a vital role in vascular endothelial homeostasis destroyed by P. gingivalis. These results suggest a potential intervention method for the prevention and treatment of cardiovascular disease.
Transcription tipping points for T follicular helper cell and T-helper 1 cell fate commitment
Authors: Sheikh Amania A. , Groom Joanna R. 
Published: September 2020

AbstractDuring viral infection, immune cells coordinate the induction of inflammatory responses that clear infection and humoral responses that promote protection. CD4+T-cell differentiation sits at the center of this axis. Differentiation toward T-helper 1 (Th1) cells mediates inflammation and pathogen clearance, while T follicular helper (Tfh) cells facilitate germinal center (GC) reactions for the generation of high-affinity antibodies and immune memory. While Th1 and Tfh differentiation occurs in parallel, these CD4+T-cell identities are mutually exclusive, and progression toward these ends is determined via the upregulation of T-bet and Bcl6, respectively. These lineage-defining transcription factors act in concert with multiple networks of transcriptional regulators that tip the T-bet and Bcl6 axis in CD4+T-cell progenitors to either a Th1 or Tfh fate. It is now clear that these transcriptional networks are guided by cytokine cues that are not only varied between distinct viral infections but also dynamically altered throughout the duration of infection. Thus, multiple intrinsic and extrinsic factors combine to specify the fate, plasticity, and function of Th1 and Tfh cells during infection. Here, we review the current information on the mode of action of the lineage-defining transcription factors Bcl6 and T-bet and how they act individually and in complex to govern CD4+T-cell ontogeny. Furthermore, we outline the multifaceted transcriptional regulatory networks that act upstream and downstream of Bcl6 and T-bet to tip the differentiation equilibrium toward either a Tfh or Th1 fate and how these are impacted by dynamic inflammatory cues.
A robust and tunable halogen bond organocatalyzed 2-deoxyglycosylation involving quantum tunneling
Authors: Xu Chunfa , Rao V. U. Bhaskara , Weigen Julia , Loh Charles C. J. 
Published: September 2020

AbstractThe development of noncovalent halogen bonding (XB) catalysis is rapidly gaining traction, as isolated reports documented better performance than the well-established hydrogen bonding thiourea catalysis. However, convincing cases allowing XB activation to be competitive in challenging bond formations are lacking. Herein, we report a robust XB catalyzed 2-deoxyglycosylation, featuring a biomimetic reaction network indicative of dynamic XB activation. Benchmarking studies uncovered an improved substrate tolerance compared to thiourea-catalyzed protocols. Kinetic investigations reveal an autoinductive sigmoidal kinetic profile, supporting an in situ amplification of a XB dependent active catalytic species. Kinetic isotopic effect measurements further support quantum tunneling in the rate determining step. Furthermore, we demonstrate XB catalysis tunability via a halogen swapping strategy, facilitating 2-deoxyribosylations of D-ribals. This protocol showcases the clear emergence of XB catalysis as a versatile activation mode in noncovalent organocatalysis, and as an important addition to the catalytic toolbox of chemical glycosylations.
Functional parcellation of the default mode network: a large-scale meta-analysis
Authors: Wang Shaoming , Tepfer Lindsey J. , Taren Adrienne A. , Smith David V. 
Published: September 2020

AbstractThe default mode network (DMN) consists of several regions that selectively interact to support distinct domains of cognition. Of the various sites that partake in DMN function, the posterior cingulate cortex (PCC), temporal parietal junction (TPJ), and medial prefrontal cortex (MPFC) are frequently identified as key contributors. Yet, it remains unclear whether these subcomponents of the DMN make unique contributions to specific cognitive processes and health conditions. To address this issue, we applied a meta-analytic parcellation approach used in prior work. This approach used the Neurosynth database and classification methods to quantify the association between PCC, TPJ, and MPFC activation and specific topics related to cognition and health (e.g., decision making and smoking). Our analyses replicated prior observations that the PCC, TPJ, and MPFC collectively support multiple cognitive functions such as decision making, memory, and awareness. To gain insight into the functional organization of each region, we parceled each region based on its coactivation pattern with the rest of the brain. This analysis indicated that each region could be further subdivided into functionally distinct subcomponents. Taken together, we further delineate DMN function by demonstrating the relative strengths of association among subcomponents across a range of cognitive processes and health conditions. A continued attentiveness to the specialization within the DMN allows future work to consider the nuances in sub-regional contributions necessary for healthy cognition, as well as create the potential for more targeted treatment protocols in various health conditions.
A partial least squares analysis of functional status, disability, and quality of life after surgical decompression for degenerative cervical myelopathy
Authors: Badhiwala Jetan H. , Khan Omar , Wegner Adam , Jiang Fan , Wilson Jamie R. F. , Morgan Benjamin R. , Ibrahim George M. , Wilson Jefferson R. , Fehlings Michael G. 
Published: September 2020

AbstractPrevious studies aimed at identifying predictors of clinical outcomes following surgical decompression for degenerative cervical myelopathy (DCM) are limited by multicollinearity among predictors, whereby the high degree of correlation between covariates precludes detection of potentially significant findings. We apply partial least squares (PLS), a data-driven approach, to model multi-dimensional variance and dissociate patient phenotypes associated with functional, disability, and quality of life (QOL) outcomes in DCM. This was a post-hoc analysis of DCM patients enrolled in the prospective, multi-center AOSpine CSM-NA/CSM-I studies. Baseline clinical covariates evaluated as predictors included demographic (e.g., age, sex), clinical presentation (e.g., signs and symptoms), and treatment (e.g., surgical approach) characteristics. Outcomes evaluated included change in functional status (∆mJOA), disability (∆NDI), and QOL (∆SF-36) at 2 years. PLS was used to derive latent variables (LVs) relating specific clinical covariates with specific outcomes. Statistical significance was estimated using bootstrapping. Four hundred and seventy-eight patients met eligibility criteria. PLS identified 3 significant LVs. LV1 indicated an association between presentation with hand muscle atrophy, treatment by an approach other than laminectomy alone, and greater improvement in physical health-related QOL outcomes (e.g., SF-36 Physical Component Summary). LV2 suggested the presence of comorbidities (respiratory, rheumatologic, psychological) was associated with lesser improvements in functional status post-operatively (i.e., mJOA score). Finally, LV3 reflected an association between more severe myelopathy presenting with gait impairment and poorer mental health-related QOL outcomes (e.g., SF-36 Mental Component Summary). Using PLS, this analysis uncovered several novel insights pertaining to patients undergoing surgical decompression for DCM that warrant further investigation: (1) comorbid status and frailty heavily impact functional outcome; (2) presentation with hand muscle atrophy is associated with better physical QOL outcomes; and (3) more severe myelopathy with gait impairment is associated with poorer mental QOL outcomes.
Bacillus licheniformis strain POT1 mediated polyphenol biosynthetic pathways genes activation and systemic resistance in potato plants against Alfalfa mosaic virus
Authors: Abdelkhalek Ahmed , Al-Askar Abdulaziz A. , Behiry Said I. 
Published: September 2020

AbstractAlfalfa mosaic virus (AMV) is a worldwide distributed virus that has a very wide host range and causes significant crop losses of many economically important crops, including potato (Solanum tuberosumL.). In this study, the antiviral activity ofBacillus licheniformisstrain POT1 against AMV on potato plants was evaluated. The dual foliar application of culture filtrate (CF), 24 h before and after AMV-inoculation, was the most effective treatment that showed 86.79% reduction of the viral accumulation level and improvement of different growth parameters. Moreover, HPLC analysis showed that a 20 polyphenolic compound was accumulated with a total amount of 7,218.86 and 1606.49 mg/kg in POT1-treated and non-treated plants, respectively. Additionally, the transcriptional analysis of thirteen genes controlling the phenylpropanoid, chlorogenic acid and flavonoid biosynthetic pathways revealed that most of the studied genes were induced after POT1 treatments. The stronger expression level ofF3H, the key enzyme in flavonoid biosynthesis in plants, (588.133-fold) andAN2, anthocyanin 2 transcription factor, (97.005-fold) suggested that the accumulation flavonoid, especially anthocyanin, might play significant roles in plant defense against viral infection. Gas chromatography-mass spectrometry (GC-MS) analysis showed that pyrrolo[1,2-a]pyrazine-1,4-dione is the major compound in CF ethyl acetate extract, that is suggesting it acts as elicitor molecules for induction of systemic acquired resistance in potato plants. To our knowledge, this is the first study of biological control of AMV mediated by PGPR in potato plants.
Selective nitrate removal from aqueous solutions by a hydrotalcite-like absorbent FeMgMn-LDH
Authors: Zhou Hongguang , Tan Youlin , Gao Wei , Zhang Yue , Yang Yanmei 
Published: September 2020

AbstractFeMgMn-LDH, a type of potential environmental remediation material, has been synthesized via a co-precipitation method, and its adsorption characteristics for nitrate were investigated in this study. It’s shown that the prepared FeMgMn-LDH is a promising adsorbent for anions removal, which has high buffer capacity (final pH remained between 9 and 10) and high reversibility, and can remove nitrate ions selectively though an anion-sieve effect. The maximum amount of nitrate adsorption is 10.56 N-mg g−1 at 25 ℃. The removal rate of nitrate ions can reach 86.26% with the adsorbent dose of 5 g/L in a real water. The competition order of coexisting anions on nitrate adsorption by FeMgMn-LDH is CO32− > PO43− > SO42−. The negative values of ΔG0 (from − 27.796 to − 26.426 kJ mol−1) and ΔH0 (− 6.678 kJ mol−1) indicate that the nitrate adsorption process on the FeMgMn-LDH is spontaneous and exothermic. The main adsorption mechanisms of nitrate removal from aqueous solutions by FeMgMn-LDH are electrostatic attraction and ion exchange.
Determination of anodal tDCS intensity threshold for reversal of corticospinal excitability: an investigation for induction of counter-regulatory mechanisms
Authors: Hassanzahraee Maryam , Nitsche Michael A. , Zoghi Maryam , Jaberzadeh Shapour 
Published: September 2020

AbstractTranscranial direct current stimulation is applied to modulate activity, and excitability of the brain. Basically, LTP-like plasticity is induced when anodal tDCS (a-tDCS) is applied over the primary motor cortex. However, it has been shown that specific parameters of a-tDCS can induce a plasticity reversal. We aimed to systematically assess the intensity threshold for reversal of the direction of plasticity induced by a-tDCS, monitored by corticospinal excitability (CSE), and explored mechanisms regulating this reversal. Fifteen healthy participants received a-tDCS in pseudo-random order for 26 min with four intensities of 0.3, 0.7, 1, and 1.5 mA. To measure CSE changes, single-pulse TMS was applied over the left M1, and motor evoked potentials of a contralateral hand muscle were recorded prior to a-tDCS, immediately and 30-min post-intervention. Paired-pulse TMS was used to evaluate intracortical excitation and inhibition. CSE increased significantly following a-tDCS with an intensity of 0.7 mA; however, the expected effect decreased and even reversed at intensities of 1 and 1.5 mA. ICF was significantly increased while SICI and LICI decreased at 0.7 mA. On the other hand, a significant decrease of ICF, but SICI and LICI enhancement was observed at intensities of 1, and 1.5 mA. The present findings show an intensity threshold of ≥ 1 mA for 26 min a-tDCS to reverse LTP- into LTD-like plasticity. It is suggested that increasing stimulation intensity, with constant stimulation duration, activates counter-regulatory mechanisms to prevent excessive brain excitation. Therefore, stimulation intensity and plasticity induced by a-tDCS might non-linearly correlate in scenarios with prolonged stimulation duration.
The electrophysiological underpinnings of variation in verbal working memory capacity
Authors: Pavlov Yuri G. , Kotchoubey Boris 
Published: September 2020

AbstractWorking memory (WM) consists of short-term storage and executive components. We studied cortical oscillatory correlates of these two components in a large sample of 156 participants to assess separately the contribution of them to individual differences in WM. The participants were presented with WM tasks of above-average complexity. Some of the tasks required only storage in WM, others required storage and mental manipulations. Our data indicate a close relationship between frontal midline theta, central beta activity and the executive components of WM. The oscillatory counterparts of the executive components were associated with individual differences in verbal WM performance. In contrast, alpha activity was not related to the individual differences. The results demonstrate that executive components of WM, rather than short-term storage capacity, play the decisive role in individual WM capacity limits.
Emission of single photons in the weak coupling regime of the Jaynes Cummings model
Authors: Noh Changsuk 
Published: September 2020

AbstractA recently proposed variant of an unconventional photon blockade scheme is studied for a single emitter weakly coupled to a resonator mode. By controlling two weak coherent fields driving the emitter and the resonator mode, a strongly nonclassical output field is obtained, which is not only antibunched, but has vanishing higher photon number coincidences. For a given set of system parameters, the frequencies and strengths of the driving fields that yield such an output are given.
Nanotomographic evaluation of precipitate structure evolution in a Mg–Zn–Zr alloy during plastic deformation
Authors: Zeller-Plumhoff Berit , Robisch Anna-Lena , Pelliccia Daniele , Longo Elena , Slominska Hanna , Hermann Alexander , Krenkel Martin , Storm Malte , Estrin Yuri , Willumeit-Römer Regine , Salditt Tim , Orlov Dmytro 
Published: September 2020

AbstractMagnesium and its alloys attract increasingly wide attention in various fields, ranging from transport to medical solutions, due to their outstanding structural and degradation properties. These properties can be tailored through alloying and thermo-mechanical processing, which is often complex and multi-step, thus requiring in-depth analysis. In this work, we demonstrate the capability of synchrotron-based nanotomographic X-ray imaging methods, namely holotomography and transmission X-ray microscopy, for the quantitative 3D analysis of the evolution of intermetallic precipitate (particle) morphology and distribution in magnesium alloy Mg–5.78Zn–0.44Zr subjected to a complex multi-step processing. A rich history of variation of the intermetallic particle structure in the processed alloy provided a testbed for challenging the analytical capabilities of the imaging modalities studied. The main features of the evolving precipitate structure revealed earlier by traditional light and electron microscopy methods were confirmed by the 3D techniques of synchrotron-based X-ray imaging. We further demonstrated that synchrotron-based X-ray imaging enabled uncovering finer details of the variation of particle morphology and number density at various stages of processing—above and beyond the information provided by visible light and electron microscopy.
Social efficiency deficit deciphers social dilemmas
Authors: Arefin Md. Rajib , Kabir K. M. Ariful , Jusup Marko , Ito Hiromu , Tanimoto Jun 
Published: September 2020

AbstractWhat do corruption, resource overexploitation, climate inaction, vaccine hesitancy, traffic congestion, and even cancer metastasis have in common? All these socioeconomic and sociobiological phenomena are known as social dilemmas because they embody in one form or another a fundamental conflict between immediate self-interest and long-term collective interest. A shortcut to the resolution of social dilemmas has thus far been reserved solely for highly stylised cases reducible to dyadic games (e.g., the Prisoner’s Dilemma), whose nature and outcome coalesce in the concept of dilemma strength. We show that a social efficiency deficit, measuring an actor’s potential gain in utility or fitness by switching from an evolutionary equilibrium to a social optimum, generalises dilemma strength irrespective of the underlying social dilemma’s complexity. We progressively build from the simplicity of dyadic games for which the social efficiency deficit and dilemma strength are mathematical duals, to the complexity of carcinogenesis and a vaccination dilemma for which only the social efficiency deficit is numerically calculable. The results send a clear message to policymakers to enact measures that increase the social efficiency deficit until the strain between what is and what could be incentivises society to switch to a more desirable state.
Persistent dark states in anisotropic central spin models
Authors: Villazon Tamiro , Claeys Pieter W. , Pandey Mohit , Polkovnikov Anatoli , Chandran Anushya 
Published: September 2020

AbstractLong-lived dark states, in which an experimentally accessible qubit is not in thermal equilibrium with a surrounding spin bath, are pervasive in solid-state systems. We explain the ubiquity of dark states in a large class of inhomogeneous central spin models using the proximity to integrable lines with exact dark eigenstates. At numerically accessible sizes, dark states persist as eigenstates at large deviations from integrability, and the qubit retains memory of its initial polarization at long times. Although the eigenstates of the system are chaotic, exhibiting exponential sensitivity to small perturbations, they do not satisfy the eigenstate thermalization hypothesis. Rather, we predict long relaxation times that increase exponentially with system size. We propose that this intermediate chaotic but non-ergodic regime characterizes mesoscopic quantum dot and diamond defect systems, as we see no numerical tendency towards conventional thermalization with a finite relaxation time.
Sexual dimorphism of detrusor function demonstrated by urodynamic studies in rhesus macaques
Authors: Biscola Natalia P. , Christe Kari L. , Rosenzweig Ephron S. , Tuszynski Mark H. , Havton Leif A. 
Published: September 2020

AbstractThe lower urinary tract (LUT) and micturition reflexes are sexually dimorphic across mammals. Sex as a biological variable is also of critical importance for the development and translation of new medical treatments and therapeutics interventions affecting pelvic organs, including the LUT. However, studies of LUT function with comparisons between the sexes have remained sparse, especially for larger mammals. Detrusor function was investigated by filling cystometry and pressure flow studies in 16 male and 22 female rhesus macaques. By filling cystometry, male subjects exhibited a significantly larger bladder capacity and compliance compared to females. Pressure flow studies showed a significantly higher bladder pressure at voiding onset, peak pressure, and elevation in detrusor-activated bladder pressure from the end of bladder filling to peak pressure in the male subjects. The activation of reflex micturition, with associated detrusor contractions, resulted in voiding in a significantly larger proportion of female compared to male subjects. A higher urethral outlet resistance is suggested in the male subjects. We conclude that sexual dimorphism of detrusor function is prominent in rhesus macaques, shares many features with the human, and merits consideration in translational and pre-clinical research studies of micturition and LUT function in non-human primates.
Late attentional processes potentially compensate for early perceptual multisensory integration deficits in children with autism: evidence from evoked potentials
Authors: Stefanou Maria Elena , Dundon Neil M. , Bestelmeyer Patricia E. G. , Ioannou Chara , Bender Stephan , Biscaldi Monica , Smyrnis Nikolaos , Klein Christoph 
Published: September 2020

AbstractSensory processing deficits and altered long-range connectivity putatively underlie Multisensory Integration (MSI) deficits in Autism Spectrum Disorder (ASD). The present study set out to investigate non-social MSI stimuli and their electrophysiological correlates in young neurotypical adolescents and adolescents with ASD. We report robust MSI effects at behavioural and electrophysiological levels. Both groups demonstrated normal behavioural MSI. However, at the neurophysiological level, the ASD group showed less MSI-related reduction of the visual P100 latency, greater MSI-related slowing of the auditory P200 and an overall temporally delayed and spatially constrained onset of MSI. Given the task design and patient sample, and the age of our participants, we argue that electro-cortical indices of MSI deficits in ASD: (a) can be detected in early-adolescent ASD, (b) occur at early stages of perceptual processing, (c) can possibly be compensated by later attentional processes, (d) thus leading to normal MSI at the behavioural level.