bluuebunny/crossref_metadata_2025_split huggingface dataset:
Venous thromboembolism associated with CD19-directed CAR T-cell therapy in large B-cell lymphoma
Authors: Hashmi Hamza , Mirza Abu-Sayeef , Darwin Alicia , Logothetis Constantine , Garcia Franco , Kommalapati Anuhya , Mhaskar Rahul S. , Bachmeier Christina , Chavez Julio C. , Shah Bijal , Pinilla-Ibarz Javier , Khimani Farhad , Lazaryan Aleksandr , Liu Hien , Davila Marco L. , Locke Frederick L. , Nishihori Taiga , Jain Michael D. 
Published: September 2020

Key Points
VTE developed in 11% of lymphoma patients after CAR T-cell therapy and was managed safely with anticoagulation. Coagulation abnormalities after CAR T-cell therapy occur but do not commonly lead to bleeding events.
Hematological reference intervals among full-term newborns in Ethiopia: a cross-sectional study
Authors: Tiruneh Tegenaw , Kiros Teklehaimanot , Getu Sisay 
Published: September 2020

Abstract
Background
Hematological reference intervals are used for medical decision tools for interpretation of numerical test results. Establishing of hematological interval among newborn babies is very important for the diagnosis of malignancy, anemia, bleeding disorders, and various infections. There are no locally established hematological reference intervals in Ethiopia. Thus, the aim of this study is to establish locally determined hematological reference interval among full-term newborns.

Methods
A cross-sectional study was conducted from May 15 to July 30 2019 among 151 apparently healthy full-term newborns at Gondar University Hospital. About 3 ml of cord blood was obtained for analysis of Hematological parameters and determined by using Sysmex KX-21N (Sysmex Corporation Kobe, Japan) automated analyzer. Median, 2.5th and 97.5th percentile were computed.

Result
Male to female ratio was almost equal. All hematological parameter had no statistically significant difference between males and females. The delivery types were not influenced its hematological values. The reference interval of white blood cells, red blood cells, platelets, hemoglobin, hematocrit, mean cell volume, and mean cell hemoglobin were (7.64–22.16) x109/l, (3.69–5.47)x1012/l, (132.74–413.4) x109/l, (13.32–19.64) g/dl and (39.42–58.06)%, (91.6-113.22)fl, and (30.48–38.02 pg), respectively.

Conclusions
All hematological reference intervals were established from full-term newborns at University of Gondar hospital was different from other studies in Nigeria, Iraq, Pakistan, Nepal, Saudi Arabia and Iran. Therefore, own determined reference value is very important for the clinicians to correctly diagnosis the patients at health facility levels.
K-wire fixation vs 23-gauge percutaneous hand- crossed hypodermic needle for the treatment of distal phalangeal fractures
Authors: Senesi Letizia , Marchesini Andrea , Pangrazi Pier Paolo , De Francesco Marialuisa , Gigante Antonio , Riccio Michele , De Francesco Francesco 
Published: September 2020

Abstract
Background
Distal Phalanx (DP) fractures are the most common hand injuries. Bone fixation associated with soft tissue reconstruction, is often required to ensure more effective outcomes. The aim of the present study is to compare functional outcomes of DP fractures surgically treated with crossed manual drilled 23 Gauge needles vs crossed Kirschner-wires (k-wire).

Methods
Clinical data included analysis of patient demographics, range of motion (ROM), and complications. Radiographic assessment considered fracture type, location, fracture displacement, and radiographic union. Functional outcomes analysis was performed.The statistical significance was assessed at the level of probability lower than 5%.

Results
A total of 60 patients from 2012 to 2015 were retrospectively enrolled and among them 12 patients suffering from diabetes or current smokers. A total of 60 DP fractures were treated, 32 with needles (group A) and 28 with k-wire fixation (group B). Time to union, showed in different time points, was significantly lower in group A (≤ 40 days, p = 0.023*) compared to group B. ROM of the distal interphalangeal joint at six months follow-up was 60° in group A and 40° in group B. A significant improvement was observed (p = 0.001*) in the 23 G needle treated group. Functional outcome analysis showed that VAS was significantly lower in group A compared to group B (p = 0.023*).

Conclusion
Our study showed that the 23 G needle yielded satisfactory results in terms of time to union and range of motion compared to k-wire fixation especially for tuft and shaft DP fractures. Therefore, should be a valid alternative to k-wire fixation in selected patients.
High-viscosity bone cement for vertebral compression fractures: a prospective study on intravertebral diffusion and leakage of bone cement
Authors: Wang Meiyong , Jin Qunhua 
Published: September 2020

Abstract
Background
Bone cement leakage causes severe complication following percutaneous vertebroplasty. This study probed the diffusion and leakage status of bone cement injected within diverged time duration, so as to find the optimal injection time for bone cement.

Methods
A total of 70 patients with osteoporotic vertebral compression fractures with a symptom of low back pain, who underwent treatment at hospital were enrolled in this study. Patients were randomized into three groups: < 180 s, 180–300, and > 300 s of injection time duration from the beginning to the completion of the injection. The scenarios of vertebral bone cement leakage and diffusion were inspected using postoperative CT.

Results
The diffusion coefficient was higher in group A than in group B whereas it was higher in group B than in group C, but without statistical significance among the three groups. The leakage rate was without statistical significance among the three groups. The injection time of bone cement was negatively correlated with the diffusion coefficient, at the correlation coefficient of − 0.253.

Conclusions
The diffusion coefficient of high-viscosity bone cement is negatively correlated with the injection time, and the leakage rate of high-viscosity bone cement does not reduce with the prolongation of injection time.
The potential roles of exosomes in pancreatic cancer initiation and metastasis
Authors: Sun Wei , Ren Ying , Lu Zaiming , Zhao Xiangxuan 
Published: September 2020

AbstractPancreatic cancer (PaCa) is an insidious and highly metastatic malignancy, with a 5-year survival rate of less than 5%. So far, the pathogenesis and progression mechanisms of PaCa have been poorly characterized. Exosomes correspond to a class of extracellular nanovesicles, produced by a broad range of human somatic and cancerous cells. These particular nanovesicles are mainly composed by proteins, genetic substances and lipids, which mediate signal transduction and material transport. A large number of studies have indicated that exosomes may play decisive roles in the occurrence and metastatic progression of PaCa. This article summarizes the specific functions of exosomes and their underlying molecular mechanisms in mediating the initiation and metastatic capability of PaCa.
Prevalence, genetic diversity and implications for public health of Enterocytozoon bieneusi in various rodents from Hainan Province, China
Authors: Zhao Wei , Zhou Huanhuan , Yang Ling , Ma Tianming , Zhou Jingguo , Liu Haiju , Lu Gang , Huang Huicong 
Published: September 2020

Abstract
Background
Rodents, globally overpopulated, are an important source for zoonotic disease transmission to humans, including Enterocytozoon bieneusi (one of the most prevalent zoonotic pathogens). Here, we studied the prevalence and performed genetic analyses of E. bieneusi in rodents from the Hainan Province of China.

Methods
A total of 603 fresh fecal samples were gathered from 369 wild rats, 117 bamboo rats, 93 Asiatic brush-tailed porcupine and 24 red-bellied squirrels. The wild rats were identified to the species level by amplification of a 421-bp region of the cytb gene from fecal DNA using PCR. Genotype analysis was performed by amplification of the internal transcribed spacer (ITS) region of rDNA of E. bieneusi using PCR.

Results
Seven wild rat species were identified. The average rate of infection with E. bieneusi was 15.8% (95/603) with 18.7% (69/369) in wild rats, 11.9% (25/210) in farmed rodents and 4.2% (1/24) in red-bellied squirrels. Sixteen E. bieneusi genotypes were identified, including 9 known genotypes (D, Type IV, PigEBITS7, Peru8, Peru11, ESH02, S7, EbpA and CHG5), and 7 novel genotypes (HNR-I to HNR-VII). Genotype D (44.2%, 42/95) predominated, followed by PigEBITS7 (20.0%, 19/95), HNR-VII (15.8%, 15/95), Type IV (5.3%, 5/95), HNR-III (2.1%, 2/95), HNR-VI (2.1%, 2/95) and each of the remaining 10 genotypes (1.1%, 1/95). The phylogenetic analysis of the ITS region of E. bieneusi divided the identified genotypes into the following four groups: Group 1 (n = 13), Group 2 (n = 1), Group 12 (n = 1), and the novel Group 13 (n = 1).

Conclusions
To our knowledge, this is the first report on the identification of E. bieneusi in rodents from Hainan, China. The zoonotic potential of the identified E. bieneusi genotypes suggested that the rodents poses a serious threat to the local inhabitants. Thus, measures need to be taken to control the population of wild rats in the areas investigated in this study, along with identification of safe methods for disposal of farmed rodent feces. Additionally, the local people should be made aware of the risk of disease transmission from rodents to humans.
Analysis of brain region-specific co-expression networks reveals clustering of established and novel genes associated with Alzheimer disease
Authors: Lancour Daniel , Dupuis Josée , Mayeux Richard , Haines Jonathan L. , Pericak-Vance Margaret A. , Schellenberg Gerard C. , Crovella Mark , Farrer Lindsay A. , Kasif Simon 
Published: September 2020

Abstract
Background
Identifying and understanding the functional role of genetic risk factors for Alzheimer disease (AD) has been complicated by the variability of genetic influences across brain regions and confounding with age-related neurodegeneration.

Methods
A gene co-expression network was constructed using data obtained from the Allen Brain Atlas for multiple brain regions (cerebral cortex, cerebellum, and brain stem) in six individuals. Gene network analyses were seeded with 52 reproducible (i.e., established) AD (RAD) genes. Genome-wide association study summary data were integrated with the gene co-expression results and phenotypic information (i.e., memory and aging-related outcomes) from gene knockout studies in Drosophila to generate rankings for other genes that may have a role in AD.

Results
We found that co-expression of the RAD genes is strongest in the cortical regions where neurodegeneration due to AD is most severe. There was significant evidence for two novel AD-related genes including EPS8 (FDR p = 8.77 × 10−3) and HSPA2 (FDR p = 0.245).

Conclusions
Our findings indicate that AD-related risk factors are potentially associated with brain region-specific effects on gene expression that can be detected using a gene network approach.
Elevated CA 125 level in a mucinous cystadenoma and a teratoma: a case report
Authors: Ekanayake Chanil Deshan , Munasinghe Nayoman , Kumarasinghe Iranthi , Rasnayake Sachini 
Published: September 2020

Abstract
Background
The presence of a suspicious ovarian cyst with elevated cancer antigen 125 level in a woman of reproductive age poses a serious therapeutic dilemma. Mature cystic teratomas and mucinous cystadenomas may also cause an increase in cancer antigen 125.

Case presentation
A 43-year-old Sinhalese woman with a history of anovulatory subfertility for 5 years presented with heavy menstrual bleeding and secondary dysmenorrhea of 6 months’ duration. Imaging (pelvic ultrasound and computed tomography of the abdomen and pelvis) revealed a hemorrhagic cyst (6 × 4 cm) on the right side and a multilocular cyst with solid areas (10 × 7 cm) on the left side. Her cancer antigen 125 level was 2715 U/ml. Following a multidisciplinary team meeting, a fertility-sparing staging laparotomy was performed, which included right cystectomy, left oophorectomy, infracolic omentectomy, and peritoneal washings. Histology revealed a mucinous cystadenoma of the right ovary and a mature cystic teratoma on the left ovary. No malignant cells were observed in peritoneal washings. The patient’s cancer antigen 125 level dropped to 74.8 U/ml 1 month after surgery.

Conclusion
Rarely, teratomas and mucinous cystadenomas may also give rise to an extremely high cancer antigen 125 level. The risk of malignancy index and risk of malignancy algorithm may both be misleading in these instances. Therefore, multidisciplinary input, fertility-sparing surgery, and follow-up are paramount to achieve optimal treatment and patient satisfaction.
Advances in myopia research anatomical findings in highly myopic eyes
Authors: Jonas Jost B. , Wang Ya Xing , Dong Li , Guo Yin , Panda-Jonas Songhomitra 
Published: September 2020

Abstract
Background
The goal of this review is to summarize structural and anatomical changes associated with high myopia.

Main text
Axial elongation in myopic eyes is associated with retinal thinning and a reduced density of retinal pigment epithelium (RPE) cells in the equatorial region. Thickness of the retina and choriocapillaris and RPE cell density in the macula are independent of axial length. Choroidal and scleral thickness decrease with longer axial length in the posterior hemisphere of the eye, most marked at the posterior pole. In any eye region, thickness of Bruch’s membrane (BM) is independent of axial length. BM opening, as the inner layer of the optic nerve head layers, is shifted in temporal direction in moderately elongated eyes (axial length <26.5 mm). It leads to an overhanging of BM into the intrapapillary compartment at the nasal optic disc side, and to an absence of BM at the temporal disc border. The lack of BM at the temporal disc side is the histological equivalent of parapapillary gamma zone. Gamma zone is defined as the parapapillary region without BM. In highly myopic eyes (axial length >26.5 mm), BM opening enlarges with longer axial length. It leads to a circular gamma zone. In a parallel manner, the peripapillary scleral flange and the lamina cribrosa get longer and thinner with longer axial length in highly myopic eyes. The elongated peripapillary scleral flange forms the equivalent of parapapillary delta zone, and the elongated lamina cribrosa is the equivalent of the myopic secondary macrodisc. The prevalence of BM defects in the macular region increases with longer axial length in highly myopic eyes. Scleral staphylomas are characterized by marked scleral thinning and spatially correlated BM defects, while thickness and density of the choriocapillaris, RPE and BM do not differ markedly between staphylomatous versus non-staphylomatous eyes in the respective regions.

Conclusions
High axial myopia is associated with a thinning of the sclera and choroid posteriorly and thinning of the retina and RPE density in the equatorial region, while BM thickness is independent of axial length. The histological changes may point towards BM having a role in the process of axial elongation.
Cerebral abscesses of tuberculosis origin: study of 8 cases at the University Hospital of Conakry
Authors: Fatoumata Barry Louncény , Sory Souare Ibrahima , Abass Cissé Fodé , Bachir Djibo Hamani A. , Ghislain Atakla H. , Youssouf Condé Alpha , Mamoudou Barry , Djigué Barry Souleymane , Ansoumane Donzo , Sory Barry Ibrahima , Souaré Ibrahima Sory , Sény Youla , Mamadi Camara , Amara Cissé 
Published: September 2020

AbstractIntroductionTuberculosis of the central nervous system (CNS) remains endemic in developing countries with high morbidity and mortality despite advances in imaging and treatment. The objective of our work was to describe the diagnostic and therapeutic difficulties of this pathology in the context of a country with limited health resources.Materials and methodsWe retrospectively studied 8 cerebral tuberculosis abscess files, collected in the archives of the neurosurgery department of the Conakry University Hospital over a 5-year period (January 2013–December 2017). The diagnosis was made by scanning and by isolation of acid-fast bacilli (AFB) by direct examination of pus.ResultsMean age was 33 years (9–56 years), sex, 5H 5 men/3F 3 women. History of pulmonary TB, 3 cases; TB contagious, 5 cases; TST ITR positive, 5 cases; associated visceral TB, 5 cases; HIV positive serology, 2 cases. The clinic was dominated by altered consciousness, 7 cases; focal signs, 7 cases; and fever, 5 cases. The site was hemispherical in 7 cases and one case in the posterior brain fossa. Treatment was medico-surgical in all patients. The evolution was favorable in 3 cases, the neurological sequelae in 3 cases, 2 cases of death, and 2 cases of recurrence.ConclusionCerebral tuberculous abscesses constitute a medico-surgical emergency. Despite their rarity, morbidity and mortality remains high in the context of developing countries due to diagnostic and therapeutic delays.
Development of polyclonal antisera against movement proteins from three poleroviruses infecting cucurbits
Authors: Zhang Shao-Kang , Zhao Tian-Yu , Shi Xing , Liu Yu-Zi , Wang Ying , Zhang Zong-Ying , Li Da-Wei , Yu Jia-Lin , Shang Qiao-Xia , Han Cheng-Gui 
Published: September 2020

AbstractCucurbit aphid-borne yellows virus (CABYV), melon aphid-borne yellows virus (MABYV) and suakwa aphid-borne yellows virus (SABYV) are three poleroviruses that infect cucurbit crops. Developing specific antisera against such viruses is crucial for their detection and functional understanding of related genes. However, no studies have yet reported viral detection using antisera against movement proteins (MP) in these three viruses. In this study, we generated plasmids expressing three viral MP genes, and transformed them into the Escherichia coli strain, Rosetta, to recombinantly express and purify fusion proteins. Then, polyclonal antisera were derived by immunizing New Zealand white rabbits, after which western blotting was used to determine the titer, sensitivity and specificity of the antisera. The antisera titers against MPCABYV, MPMABYV and MPSABYV were 1:512000, 1:256000 and 1:256000, respectively. The optimized working concentrations for the three antisera ranged between 1:10000 and 1:64000. Additionally, antisera against MPCABYV and MPMABYV only reacted with their corresponding MP proteins. Antiserum against MPSABYV not only had the strongest reaction with its MP, but also reacted weakly with MPCABYV and MPMABYV. All three antisera exerted no serological reactions with other poleroviruses. Furthermore, our data showed that all antisera specifically detected MPs in both Nicotiana benthamiana and cucumber leaves. Thus, we have established a system that sensitively detects three poleroviruses infecting cucurbits, using antisera against MPs. We provide a foundation for future research on the serological detection of these viruses, and interaction mechanisms between viruses and host plants.
A unified gas-kinetic scheme for micro flow simulation based on linearized kinetic equation
Authors: Liu Chang , Xu Kun 
Published: September 2020

AbstractThe flow regime of micro flow varies from collisionless regime to hydrodynamic regime according to the Knudsen number Kn, which is defined as the ratio of the mean free path over the local characteristic length. On the kinetic scale, the dynamics of a small-perturbed micro flow can be described by the linearized kinetic equation. In the continuum regime, according to the Chapman-Enskog theory, hydrodynamic equations such as linearized Euler equations and Navier-Stokes equations can be derived from the linearized kinetic equation. In this paper, we are going to propose a unified gas kinetic scheme (UGKS) based on the linearized kinetic equation. For the simulation of small-perturbed micro flow, the linearized scheme is more efficient than the nonlinear one. In the continuum regime, the cell size and time step of UGKS are not restricted to be less than the particle mean free path and collision time, and the UGKS becomes much more efficient than the traditional upwind-flux-based operator-splitting kinetic solvers. The important methodology of UGKS is the following. Firstly, the evolution of microscopic distribution function is coupled with the evolution of macroscopic flow quantities. Secondly, the numerical flux of UGKS is constructed based on the integral solution of kinetic equation, which provides a genuinely multiscale and multidimensional numerical flux. The UGKS recovers the solution of linear kinetic equation in the rarefied regime, and converges to the solution of the linear hydrodynamic equations in the continuum regime. An outstanding feature of UGKS is its capability of capturing the accurate viscous solution in bulk flow region once the hydrodynamic flow structure can be resolved by the cell size even when the cell size is much larger than the kinetic length scale, such as the capturing of the viscous boundary layer with a cell size being much larger than the particle mean free path. Such a multiscale property is called unified preserving (UP) which has been studied in (Guo, et al. arXiv preprint arXiv:1909.04923, 2019). In this paper, a mathematical proof of the UP property for UGKS will be presented and this property is applicable to UGKS for solving both linear and nonlinear kinetic equations.