bluuebunny/crossref_metadata_2025_split huggingface dataset:
Toward the Application of Graphene for Combating Marine Biofouling
Authors: Jin Huichao , Tian Limei , Bing Wei , Zhao Jie , Ren Luquan 
Published: October 2020

AbstractThe discovery of graphene has brought great innovations to materials science. Since tributyltin antifouling coatings were banned worldwide in 2008, the development of green antifouling coatings has become necessary. Recently, novel graphene‐related antifouling coatings have been the focus of many studies due to their enhanced mechanical strength, excellent antifouling capabilities, and environmental friendliness. This review starts by introducing the basic antifouling mechanisms of graphene nanosheets and the possible antifouling mechanisms when graphene is incorporated into coatings. Subsequently, the progress and existing problems regarding the application of graphene in the prevention of marine biofouling are discussed. Specifically, this review focuses on six graphene‐related antifouling coatings, including pure graphene film, nanohybrids, foul release coatings, photocatalytic nanocomposites, desalination membranes, and materials for uranium enrichment. The fabrication, antifouling properties, working mechanisms, and future development of graphene‐related antifouling coatings are highlighted. In addition, the potential environmental risk of using graphene materials in preventing marine biofouling is explained, and the basic requirements for designing an environmentally friendly graphene‐related antifouling coating are discussed. Finally, the prospect of applying graphene materials for combating marine biofouling is presented. This review aims to aid in improving the design of graphene‐related green antifouling coatings.
Relationship between reaction and diffusion during ultrafine NiO reduction toward agglomeration fluidization
Authors: Li Jun , Zhu Qingshan , Li Hongzhong 
Published: October 2020

AbstractThe relationship between reaction and diffusion during ultrafine NiO reduction by H2 in a fluidized bed reactor were investigated. The result illuminates that the reduction reaction proceeding in the unreduced NiO powders is according to the nucleation model. A modified force balance model between cohesive and collision forces incorporating grain‐boundary diffusion and reaction is proposed to predict the agglomeration behavior of ultrafine Ni during the reduction of NiO in a fluidized bed. The modified force balance model shows more precise predictions than the model without consideration of grain‐boundary diffusion. Based on the model, it is found that the core of the two‐step reduction is to decouple grain growth from reduction for achieving full conversion while retaining nanosized grain sizes.
Gold‐catalyzed Cyclization of Non‐conjugated Ynone‐oxime Derivatives: Incorporation of Solvent Molecule
Authors: Taşdemir Volkan , Menges Nurettin 
Published: October 2020

AbstractAuııı‐promoted cyclization reaction of ynone‐oxime derivatives furnished 4H‐1,2‐oxazine ring under mild reaction conditions. When an alcohol is present in the reaction media, it was attached to the oxazine ring by the second activation of cyclic intermediate with a gold catalyst. Cholesterol, propargyl alcohol, phenol, and some of the different alcohol derivatives with alkyl chain were bonded to the oxazine ring in good yields. While amine derivatives did not attach to the ring under optimized reaction conditions, the molecule with the thiol group deactivated the gold catalyst under the same reaction conditions and did not give any cyclic products. With the obtained cyclization protocol, 11 unknown oxazine derivatives were synthesized and characterized. The proposed cyclization mechanism was drawn according to the two independent control experiments, DFT optimization, and NBO charges.
Role of Bm30kc6 gene in cell apoptosis and the silk gland degradation signaling pathway in Bombyx mori L.
Authors: Xiao Ying , Li Lei‐lei , Bibi Asma , Zhang Ning , Chen Ting , Mo Yitao , Yue Wanfu , Miao Yungen 
Published: October 2020

AbstractApoptosis is a process of programmed cell death that is regulated by genes independently. The Bm30kc6 gene is a kind of small molecular lipoprotein about 30 kDa, expressed highly in the late stage of the silkworm hemolymph. Our study showed that overexpression of Bm30kc6 could decrease caspase‐3 activation. Meanwhile, activation of caspase‐3 increased when Bm30kc6 expression was disturbed by small interfering RNA (siRNA). Cell apoptosis was decreased when Bm30kc6 was overexpressed under UV treatment. The apoptosis rate induced by actinomycin D is similar to the trend by UV. It was inferred that Bm30kc6 has an inhibitory effect on the apoptosis of silkworm cells. The apoptosis‐related genes, such as BmFadd, BmDredd, and BmDaxx were increased after overexpression of Bm30kc6 or decreased after interference of siRNA. It was speculated that there was an interactive relationship between Bm30kc6, BmDaxx, BmFadd, and BmDredd in the apoptosis signaling pathways. We investigated the transcription expression of the Bm30kc6 gene in different growth stages and tissues of the silkworm. The results showed that Bm30kc6 reached its peak in the hemolymph during the 6th to 7th days of the 5th instar, or in spinning post 24 h of the silk gland. In the silkworm BmN cells treated with caspase‐3/7 inhibitor, the caspase‐3 enzyme activity, and the expression levels of Bm30kc6, BmFadd, BmDredd, and BmDaxx were significantly reduced. The expression levels of Bm30kc6 increased sharply when silkworms were treated by molting hormone at Day 3 or 5 of the 5th instar. The results indicated that the expression of the Bm30kc6 gene was affected by the molting hormone and was likely to be its downstream target. In conclusion, the results suggest that the Bm30kc6 gene is involved in the regulation of the apoptotic signaling pathway and plays a role in the apoptotic process.
Validation of the Traumatic Antecedents Questionnaire using item response theory
Authors: Park Kyumin , Shim Geumsook , Jeong Bumseok 
Published: October 2020

AbstractBackgroundTraumatic Antecedents Questionnaire (TAQ) is a traumatic experience scale that measures exposure to traumatic events across four age periods. Although the TAQ has good convergent validity with other traumatic scales, the classification of the domains and the psychometric properties of the scale has not been verified.MethodsA total of 290 young adults completed the TAQ, and 156 participated in the retest. The number of trauma domains was determined using principal component analysis. Rasch model was used for verifying the items that each domain might represent in one common measurement.ResultsWhen scores were transformed as binary a code 0 and 1 from the original 4 categories, 8 domains were established consisting of Domestic violence, Sexual/other rare trauma, Incompetence, Caring family, Accidents to close person, Unstable caring environment, Safe environment, and Lack of sexual/extreme trauma. Most domains had acceptable psychometric properties with a mean‐square fit value within the range of 0.7–1.3. The Bland and Altman analysis suggest 98.7% of difference scores between test and retest were within ±2 standard deviations from the mean. TAQ severity showed a significant relationship with the multiplicity score of the Maltreatment and Abuse Chronology of Exposure scale (r = 0.677).ConclusionsThe newly proposed scoring system and 8 domains for the TAQ demonstrated excellent internal consistency, test–retest reliability, and validity. Further studies are needed to develop new items in domains with less than 5 items to improve the psychometric properties of the scale and to create a maltreatment domain that includes bullying items.
Computer‐based simulation to reduce EHR‐related chemotherapy ordering errors
Authors: Wyatt Kirk D. , Freedman Elizabeth B. , Arteaga Grace M. , Rodriguez Vilmarie , Warad Deepti M. 
Published: October 2020

AbstractBackgroundThe electronic health record (EHR) is a contributor to serious patient harm occurring within a sociotechnical system. Chemotherapy ordering is a high‐risk task due to the complex nature of ordering workflows and potential detrimental effects if wrong chemotherapeutic doses are administered. Many chemotherapy ordering errors cannot be mitigated through systems‐based changes due to the limited extent to which individual institutions are able to customize proprietary EHR software. We hypothesized that simulation‐based training could improve providers’ ability to identify and mitigate common chemotherapy ordering errors.MethodsPediatric hematology/oncology providers voluntarily participated in simulations using an EHR testing (“Playground”) environment. The number of safety risks identified and mitigated by each provider at baseline was recorded. Risks were reviewed one‐on‐one after initial simulations and at a group “lunch‐and‐learn” session. At three‐month follow‐up, repeat simulations assessed for improvements in error identification and mitigation, and providers were surveyed about prevention of real‐life safety events.ResultsThe 8 participating providers identified and mitigated an average of 5.5 out of 10 safety risks during the initial simulation, compared 7.4 safety risks at the follow up simulation (p=0.030). Two of the providers (25%) reported preventing at least one real‐world patient safety event in the clinical setting as a result of the initial training session.ConclusionsSimulation‐based training may reduce providers’ susceptibility to chemotherapy ordering safety vulnerabilities within the EHR. This approach may be used when systems‐based EHR improvements are not feasible due to limited ability to customize local instances of proprietary EHR software.
Pesticide residue in grain‐based food: Effects on health, grain quality, and chemical properties of biomacromolecules
Authors: Malalgoda Maneka , Simsek Senay 
Published: October 2020

AbstractBackground and objectivesThe use of pesticides has been increasing over the years, and although the application of pesticides has some benefits, concerns over pesticide residue in food are increasing. Additionally, pesticides can affect biochemical pathways in affected plants as determined by their mode of action. To this end, the objective of the review was to provide an overview of the issues concerning pesticide residue in grain‐based food and discuss potential implications of preharvest herbicide application on grain quality and chemistry.FindingsThere is mounting evidence that pesticide residue in food can lead to health concerns as well as environmental concerns. Additionally, relatively new agricultural practices like the preharvest application of herbicides in small grains can impact grain quality as well as the physicochemical properties of grain starch and proteins, depending on the dose and application time among other factors. Such effects need to be critically evaluated in order to elucidate how preharvest herbicide application interferes with biochemical pathways in plants.ConclusionsWith health and environmental concerns over the use of pesticides in agriculture and new evidence suggesting that preharvest application of herbicides can impact grain quality and chemistry, especially if applied early, it is critical to re‐evaluate the use of pesticides in grain production.Significance and noveltyThis review provides an insight into the effects of pesticides, especially the effects of herbicides that are applied preharvest and provides a holistic view on approaches that can be used to decrease the use of such compounds in grain production systems.
Expression of invadopodia markers can identify oral lesions with a high risk of malignant transformation
Authors: Ali Aiman , Soares Andresa Borges , Eymael Denise , Magalhaes Marco 
Published: October 2020

AbstractOral squamous cell carcinoma (OSCC) is the most common malignant tumor of the oral cavity and is usually preceded by a range of premalignant tissue abnormalities termed oral potentially malignant disorders. Identifying malignant transformation is critical for early treatment and consequently improved survival and decreased morbidity. Invadopodia (INV) are specialized subcellular structures required for cancer cell invasion. We developed a new method to visualize INV in keratinocytes using fluorescent immunohistochemistry (FIHC) and semi‐automated images analysis. The presence of INV was used to determine the risk of malignant transformation. We analyzed 145 formalin‐fixed, paraffin‐embedded (FFPE) oral biopsy samples from 95 patients diagnosed as nondysplastic, dysplastic, and OSCC including 49 patients whose lesions transformed to OSCC (progressing) and 46 cases that did not transform to OSCC (control). All samples were stained for Cortactin, tyrosine kinase substrate with five SH3 domains (Tks5) and matrix metallopeptidase 14 (MMP14) using FIHC, imaged using confocal microscopy and analyzed using a multichannel colocalization analysis. The areas of colocalization were used to generate an INV score. Using the INV score, we were able to identify progressing lesions with a sensitivity of 75–100% and specificity of 72–76%. A positive INV score was associated with increased risk of progression to OSCC. Our results suggest that INV markers can be used in conjunction with the current diagnostic standard for early detection of OSCC.
Cytology‐based screening for anal intraepithelial neoplasia in women with a history of cervical intraepithelial neoplasia or cancer
Authors: Wohlmuth Christoph , Ghorab Zeina , Shier Michael , Tinmouth Jill , Salit Irving E. , Covens Allan , Zhang Liying , Vicus Danielle 
Published: October 2020

BackgroundHigh‐risk human papillomavirus (HPV) has been identified in the pathogenesis of anal cancer. The purpose of this study was to assess the prevalence of abnormal anal cytology and HPV in women aged ≥40 years who have a history of high‐grade cervical squamous intraepithelial lesion (SIL) or cancer and to estimate the prevalence of anal intraepithelial neoplasia (AIN) using cytology as the primary screening modality.MethodsWomen who had a history of high‐grade cervical SIL or cancer and were ≥40 years of age were included in this prospective study. Anal cytology with HPV‐DNA testing was performed. All patients with abnormal anal cytology were referred for high‐resolution anoscopy (HRA), and abnormal lesions were biopsied and treated if pathologically confirmed. Abnormal anal cytology correlated with HPV status, HRA findings, and clinical and demographic characteristics.ResultsA total of 317 women completed the study. Of these, 96 (30.3%) had abnormal anal cytology (high‐grade SIL, 12.5%; low‐grade SIL, 19.8%; atypical squamous cells, cannot exclude high‐grade SIL, 6.3%; atypical squamous cells of undetermined significance, 61.5%) and 101 (31.9%) were HPV‐DNA–positive. There was a significant association between abnormal cytology results and the presence of high‐risk HPV. Of the 96 patients with abnormal cytology, 30 (31.3%) had biopsy‐proven AIN on HRA, representing 9.5% of the total patient cohort; of these, 10 (33.3%) had low‐grade AIN and 20 (66.7%) had high‐grade AIN. Older age and smoking were significant risk factors for abnormal anal cytology.ConclusionWomen aged ≥40 years with a history of high‐grade cervical SIL or cancer have a high rate of AIN. Screening for anal cancer may therefore be considered in this patient population. The optimal screening approach should be addressed in future studies.
Unidirectional response to bidirectional selection on body size II. Quantitative genetics
Authors: Le Rouzic Arnaud , Renneville Clémentine , Millot Alexis , Agostini Simon , Carmignac David , Édeline Éric 
Published: October 2020

AbstractAnticipating the genetic and phenotypic changes induced by natural or artificial selection requires reliable estimates of trait evolvabilities (genetic variances and covariances). However, whether or not multivariate quantitative genetics models are able to predict precisely the evolution of traits of interest, especially fitness‐related, life history traits, remains an open empirical question. Here, we assessed to what extent the response to bivariate artificial selection on both body size and maturity in the medaka Oryzias latipes, a model fish species, fits the theoretical predictions. Three lines (Large, Small, and Control lines) were differentially selected for body length at 75 days of age, conditional on maturity. As maturity and body size were phenotypically correlated, this selection procedure generated a bi‐dimensional selection pattern on two life history traits. After removal of nonheritable trends and noise with a random effect (“animal”) model, the observed selection response did not match the expected bidirectional response. For body size, Large and Control lines responded along selection gradients (larger body size and stasis, respectively), but, surprisingly, the Small did not evolve a smaller body length and remained identical to the Control line throughout the experiment. The magnitude of the empirical response was smaller than the theoretical prediction in both selected directions. For maturity, the response was opposite to the expectation (the Large line evolved late maturity compared to the Control line, while the Small line evolved early maturity, while the opposite pattern was predicted due to the strong positive genetic correlation between both traits). The mismatch between predicted and observed response was substantial and could not be explained by usual sources of uncertainties (including sampling effects, genetic drift, and error in G matrix estimates).
Mitochondrial DNA analysis reveals spatial genetic structure and high genetic diversity of Massicus raddei (Blessig) (Coleoptera: Cerambycidae) in China
Authors: Zhang Yufan , Manzoor Atif , Wang Xiaoyi 
Published: October 2020

AbstractThe oak longhorned beetle (OLB), Massicus raddei (Blessig, 1872) (Coleoptera: Cerambycidae), is widely distributed in Asia (China, the Korean Peninsula, Japan, Vietnam and the Russian Far‐East), but pest outbreaks have occurred only in Liaoning Province and Jilin Province of China. In order to explore possible mechanisms of local population outbreaks and characterize the genetic diversity and genetic structure of M. raddei across its range in China, three mitochondrial genes (COI, Cytb, and COII) were sequenced and analyzed for seven M. raddei populations collected from six provinces in China. From these different populations, we found a high haplotype and nucleotide diversity. Haplotype networks and phylogenetic analyses both demonstrate apparent genetic diversification between SC (southern China) and NC (northern China) population groups. A set of 21 pairwise comparisons for Fst (pairwise fixation indices) and Nm (genetic flow index) showed significant genetic differentiation and limited gene flow except for two pairs, Shandong (SD) and Liaoning (LN), and Anhui (AH) and Henan (HN). This pattern suggested that the periodic outbreak of the LN population could not be attributed to the absence of genetic flow with other spatial populations and that regional environmental factors might be responsible. AMOVA (Analysis of molecular variance) showed that the greater molecular genetic variation was among populations. Based on Tajima's D statistic, Fu's Fs, and the mismatch distribution test, we determined that the seven populations sampled were stable and had not experienced any recent population expansion. The fact that all the sampled populations showed only unique haplotypes and lacked shared or ancestral haplotypes, as well as the nonstar‐like distribution of haplotype network for concatenated genes, collectively provided powerful evidence of the stable and isolated nature of most populations. The high genetic differentiation and spatial genetic structuring among populations are both likely related to the beetle's moderate flight capacity, regional variation in host tree species and microclimate, as well as the geographic distance between sampling sites.
(Re‐) Defining evolutionary medicine
Authors: Moltzau Anderson Jacqueline , Horn Florian 
Published: October 2020

AbstractThe applicability of evolutionary biology principles to diseases has been largely questioned by the medical field. While Evolutionary Medicine (EM) developed in part to lessen this gap, EM is an independent field from both evolution and medicine, whose continued narrowing of topics as a consequence of its reductionist approach, in addition to its focus to introduce itself at a late stage in medical education, has led to its continued resistance toward implementation. In turn, this has had a profound and lasting impact on the awareness of evolution in medicine among physicians. For both the evolutionary and medical communities to reach a common perspective and obtain a greater frame‐work of medical thought, a comprehensive view of the evolution of the healthy human being needs to be introduced as a starting point during the premedical curriculum. Here, we present our views on the ongoing challenges that have caused the continued division between the evolutionary fields and medicine, and provide solutions to help bridge the gap for an interdisciplinary field of evolution in medicine.
Statistical approaches for meta‐analysis of genetic mutation prevalence
Authors: Hujoel Margaux L. A. , Parmigiani Giovanni , Braun Danielle 
Published: October 2020

AbstractEstimating the prevalence of rare germline genetic mutations in the general population is of interest as it can inform genetic counseling and risk management. Most studies that estimate the prevalence of mutations are performed in high‐risk populations, and each study is designed with differing inclusion criteria, resulting in ascertained populations. Quantifying the effects of ascertainment is necessary to estimate the prevalence in the general population. This quantification is difficult as the inclusion criteria is often based on disease status and/or family history. Combining estimates from multiple studies through a meta‐analysis is challenging due to the variety of study designs and ascertainment mechanisms as well as the complexity of quantifying the effect of these mechanisms. We provide guidelines on how to quantify the ascertainment mechanism for a wide range of settings and propose a general approach for conducting a meta‐analysis in these complex settings by incorporating study‐specific ascertainment mechanisms into a joint likelihood function. We implement the proposed likelihood‐based approach using both frequentist and Bayesian methodologies. We evaluate these approaches in simulations and show that the methods are robust and produce unbiased estimates of the prevalence. An advantage of the Bayesian approach is that it can easily incorporate uncertainty in ascertainment probability values. We apply our methods to estimate the prevalence of PALB2 mutations in the United States by combining data from multiple studies and obtain a prevalence estimate of around 0.02%.