bluuebunny/crossref_metadata_2025_split huggingface dataset:
Long noncoding RNA MEG3 blocks telomerase activity in human liver cancer stem cells epigenetically
Authors: Jiang Xiaoxue , Wang Liyan , Xie Sijie , Chen Yingjie , Song Shuting , Lu Yanan , Lu Dongdong 
Published: August 2020

Abstract
Background: MEG3 is abnormally down-regulated in most tumors and inhibits tumorigenesis.Methods: Gene infection, Western blotting and tumorigenesis test in vitro and in vivo were performed to analyze the signaling pathway. Results: MEG3 increased the loading of P300 and RNA polymerase II onto the promoter regions of P53. Notably, MEG3 increased the methylation of histone H3 at lysine 27 through increasing the interplay between PRC2 and histone H3. Furthermore, MEG3 inhibited the expression of TERT by increasing the H3K27me3 and decreasing the loading of RNA pol Ⅱ in TERT promoter regions. Moreover, MEG3 inhibit the activity of telomerase by reducing the binding of TERT to TERC competitively. In addition, MEG3 also increased the TERRA through reducing DNA methyltransferase DNMT3b binding to the promoter regions of TERRA competitively. Therefore, the interaction between TERC and TERT was competitively attenuated by increasing the interaction between TERRA and TERT, which inhibited the activity of telomerase in hLCSCs.In particular, MEG3 shortened the length of telomere by blocking the formation of complex maintaining telomere length(POT1-Exo1-TRF2-SNM1B) and decreasing the binding of the complex to telomere competitively, which was caused by increasing the interplay between P53 and HULC in hLCSCs.Strikingly, MEG3 inhibited the growth in vitro and in vivo of hLCSCs by reducing the activity of telomerase and attenuating telomeric repeat binding factor 2(TRF2).Conclusions: our results demonstrated MEG3 inhibits the occurrence of human liver cancer and these findings provide an important insight into the prevention and treatment of human liver cancer.
The Clinical Sustainability Assessment Tool: Measuring Organizational Capacity to Promote Sustainability in Healthcare
Authors: Malone Sara , Prewitt Kim , Hackett Rachel , Lin John C. , McKay Virginia , Walsh-Bailey Callie , Luke Douglas 
Published: August 2020

Abstract
Background Few validated assessment tools are available to support sustainable implementation, an increasingly recognized need among clinicians. We describe the development of the Clinical Sustainability Assessment Tool, or CSAT, designed to assess factors that contribute to sustainable practices in clinical settings. Methods Fifty participants from clinical and research fields were recruited to brainstorm factors that lead to sustained clinical practices. Once repeated factors were removed, participants sorted remaining factors based on similarity. Using concept mapping analyses, we grouped these factors into meaningful domains and developed an initial tool. We then recruited 126 practicing clinicians to pilot and evaluate the tool. Individuals were recruited from clinical settings across pediatric (53%) and adult (47%) medical and surgical subspecialties, and averaged 11 years in their position. The data were analyzed using confirmatory factor analysis (CFA) to test hypothesized subscale structure in the instrument. We used root mean square error of approximation (RMSEA) and the standardized root mean square residual (SRMR) to assess fit and thus the ability of CSAT to measure the identified domains.Results The concept mapping resulted in seven domains and 47 items. The pilot and CFA resulted in 35 items, five per domain. The RMSEA of 0.084 and the SRMR of 0.075 indicated good fit. The final domains were: engaged staff and leadership, engaged stakeholders, organizational readiness, workflow integration, implementation and training, monitoring and evaluation, and outcomes and effectiveness. Conclusions The CSAT is a new reliable assessment tool which allows for greater practical and scientific understanding of contextual factors that enable sustainable clinical practices over time. The full CSAT instrument is available at https://sustaintool.org.
Is the Perceived Neighborhood Built Environment Associated With Domain-Specific Physical Activity in Latin American Adults? An Eight-Country Observational Study
Authors: Ferrari Gerson , Werneck André O. , Silva Danilo Rodrigues , Kovalskys Irina , Gómez Georgina , Rigotti Attilio , Sanabria Lilia Yadira Cortés , García Martha Cecilia Yépez , Pareja Rossina G. , Herrera-Cuenca Marianella , Zimberg Ioná Zalcman , Guajardo Viviana , Pratt Michael , Cristi-Montero Carlos , Rodríguez-Rodríguez Fernando , Marques Adilson , Cerin Ester , Dyck Delfien Van , Pires Carlos André Miranda , Fisberg Mauro 
Published: August 2020

Abstract
Background: Characteristics of the neighborhood built environment are associated with physical activity (PA). However, few studies with representative samples have examined environmental correlates of domain-specific PA in Latin America. We examined the associations of the perceived neighborhood built environment with domain-specific PA in a large sample of adults from eight Latin American countries. Methods: This study examined data from 8185 adults (aged 18–65 years) from eight Latin American countries. The Neighbourhood Environment Walkability Survey - Abbreviated (NEWS-A) scale was used to assess perceptions of land use mix–diversity, land use mix-access, street connectivity, walking/cycling facilities, aesthetics, safety from traffic, and safety from crime. Perceived proximity from home to public open spaces (metropolitan parks, playgrounds, public squares) and to shopping centers was also assessed. Transport-related and leisure-time PA were assessed using the long form of the International Physical Activity Questionnaire. Both logistic and linear regression models were estimated on pooled data. Results: Perceptions of higher land use mix-access (OR: 1.40; 95% CI: 1.22,1.61), the existence of many alternative routes in the neighbourhood (1.12; 1.04,1.20), slow speed of traffic (1.19; 1.03,1.35) and few drivers exceeding the speed limits (1.09; 1.03,1.15) were associated with greater odds of reporting at least 10 min/week of transport-related PA. Perceptions of higher levels of land use mix-diversity, better aesthetics and greater safety from crime, the presence of crosswalks and pedestrian signals, and greater proximity of shopping centers were associated with more min/week of transport-related PA. Perceptions of higher land use mix-diversity (1.12; 1.05,1.20), higher land use mix-access (1.27; 1.13,1.43), more walking/cycling facilities (1.18; 1.09,1.28), and better aesthetics (1.10; 1.02,1.18) were associated with greater odds of engaging in at least 10 min/week of leisure-time PA versus none. Perceptions of higher land use mix-diversity were associated with more min/week of leisure PA. Conclusions: Different perceived neighborhood built environment characteristics were associated with domain-specific PA among adults from Latin America countries. Interventions designed to modify perceptions of the neighbourhood built environment might influence initiation or maintenance of domain-specific PA.Trial registration: ClinicalTrials.Gov NCT02226627. Retrospectively registered on August 27, 2014.
Interleukin (IL)-33 is dispensable for Schistosoma mansoni worm maturation,&nbsp;egg excretion, and the maintenance of egg-induced pathology in intestines of mice
Authors: Mukendi Jean Pierre Kambala , Nakamura Risa , Uematsu Satoshi , Hamano Shinjiro 
Published: August 2020

Abstract
Background: Schistosomes are trematode worms that dwell in their definitive host’s blood vessels, where females lay eggs that need to be eliminated in the environment with host excreta to maintain their life cycle. Both worms and eggs require type 2 immunity for their maturation and excretion, respectively. However, immune molecules that orchestrate such immunity remain unclear. IL-33 is one of the epithelium-derived cytokines that induce type 2 immunity in tissues. This study aimed at determining its role in the maturation, reproduction, and excretion of S. mansoni eggs, and in the maintenance of egg-induced pathology in the intestines of mice.Methods: Using S. mansoni-infected IL-33-deficient (IL-33-/-) and wild-type (WT) mice, worm morphology, reproduction, and egg excretion were studied at different time points of infection. IL-5 and IL-13 production in spleens and mesenteric lymph nodes were measured. Tissue histology was performed on the terminal ilea of non- and infected mice.Results: Morphology-wise, worms from IL-33-/- and WT mice at the fourth and sixth weeks of infection did not differ. The worms' reproduction, expressed as eggs per worm pair, as well as the excretion of eggs, expressed as the number of eggs in intestinal tissues, did not differ between IL-33-/- and WT mice. In the sixth week of infection, IL-33-/- mice presented impaired type 2 immunity in intestines, characterized by decreased production of IL-5 and IL-13 in mesenteric lymph nodes and fewer inflammatory infiltrates with fewer eosinophils in the ilea. Besides, there was no difference between IL-33-/- and WT mice in the levels of IL-25 and TSLP in intestinal tissues.Conclusions: Despite its ability to initiate type 2 immunity in tissues, IL-33 alone seems dispensable for S. mansoni maturation, reproduction, and egg excretion. The transient impairment of type 2 immunity observed in the intestines, but not spleens, highlights the importance of IL-33 over IL-25 and TSLP in initiating, but not maintaining, locally induced type 2 immunity in intestinal tissues in schistosome infection. Further studies are needed to decipher the role of each of them in schistosomiasis and clarify the possible interactions that might exist between them.
Efficacy of Widely Used Hand Disinfectants Against Human Echovirus Type 11 in China
Authors: Zhang Lei , Ji Xunmin , Peng Tuohua , He Chiming , Zheng Xiaoling , Zhou Ying , Xiao Wei , Wang Yajing , Zhang Xianchang , Zhang Jikai , Zhong Yuwen 
Published: August 2020

Abstract
Background: In the summer of 2019 an outbreak of Nosocomial infections in a newborn nursery occurred in a Shunde hospital near Foshan, resulting in five babies deaths. Echovirus-11 was proven to be the responsible agent. Echovirus-11 infections are a significant health threat in the hospitals and occasionally cause severe neurological complications and even death in children. Although good hand hygiene is important for controlling infection, relevant data regarding the efficacy of widely used hand disinfectants against Echovirus-11 are still lacking. Aim: To investigate the virucidal activity of widely used hand disinfectants against Echovirus-11. Methods: The 13 widely used hand disinfectants from Guangdong hospitals were tested for virucidal activity against Echovirus-11 with the identification test of residual disinfectants removal and the suspension test with a 60 s exposure time based on Technical Standard For Disinfection (2002). Findings: Both Disinfectant A and Disinfectant C achieved a mean log10 reduction factor in Echovirus-11 titre of ≥ 5.00, respectively, within 60 s. Disinfectant B, Disinfectant D, Disinfectant H and Disinfectant M had an effect on Echovirus-11 in a mean log10 reduction factor of ≥ 4.00.By contrast, Disinfectant E, Disinfectant F, Disinfectant G, Disinfectant I, Disinfectant J, Disinfectant K and Disinfectant L didn't improved the mean log10 reduction factor in Echovirus-11 titre with producing a factor of ＜4 after a 60 s exposure time.Conclusions: 46.2% (6/13 products) of widely used hand disinfectants have effectiveness against Echovirus-11. In general, it is risky to rely too much on hand disinfectants. In case of epidemic season or definite enterovirus contamination, washing hands with soap and water is recommended for reducing viral contamination of enterovirus 11 in clinical practice, rather than hand hygiene with alcohol-based hand disinfectants alone.
Milk Production and Constituents of Beef Cows with Different Breed Compositions
Authors: Azambuja Rodrigo C. C. , Rodrigues Pedro F. , Menezes Leonardo M. , Costa Rodrigo F. , Teixeira Bruno B. M. , Mendonça Fabio S. , Suñé Renata W. , Silveira Isabella D. B. , Cardoso Fernando F. 
Published: August 2020

Abstract
Background: There are two classes of factors that affect cow milk production and, as a consequence, the performance of calves: environmental and genetic factors. Considering the importance of milk production of beef cattle, it is essential to measure the milk production of such cows. However, such estimation presents some difficulties, especially when cows are raised exclusively in a grazing regime. This study aimed to evaluate the milk production and the nutritional composition of beef cows from eight different breed compositions (Angus: ANAN, Hereford: HHHH, Nellore: NENE, Hereford-Angus: HHAN, Angus-Hereford: ANHH, Nellore-Angus: NEAN, Angus-Nellore: ANNE, and Caracu-Angus: CRAN) raised under continuous natural pasture grazing, besides evaluating the calves' adjusted weight at 210 days until weaning.Results: NEAN cows were the most productive but did not differ from ANNE, ANHH, and CRAN, with estimated average yields of 6.2, 5.97, 5.93 and 5.86 kg/day, respectively, throughout the lactation period. NENE cows presented the lowest yields, with a daily average of 4.61 kg, although this value did not differ significantly from those of HHHH, ANAN and HHAN cows, which had means of 4.67, 4.79 and 4.84 kg/day, respectively. Calves of CRAN, NEAN, and ANNE cows were heavier than calves of ANAN, HHAN, HHHH, and NENE cows at weaning, not differing from ANHH cows, which in turn also had heavier calves than HHHH cows. NEAN, ANNE, HHHH and NENE cows had higher concentrations of total solids in milk than ANAN and ANHH.Conclusions: In conclusion, as expected, the crossbreeding of genetically more distant breed increases the milk production of beef cows. Therefore, for cow-calf operations in a subtropical climate, crossbreeding between Angus and Nellore or Caracu can be used as a genetic tool to increase cow maternal ability, through greater milk production and nutrient content, and consequently yielding heavier calves at weaning.
Risk-of-falling related outcomes improved in community-dwelling older adults after a 6-week sideways walking intervention: a feasibility and pilot study
Authors: Skiadopoulos Andreas , Stergiou Nick 
Published: August 2020

Abstract
BackgroundAging increases fall risk and alters gait mechanics and control. Our previous work has identified sideways walking as a potential training regimen to decrease fall risk by improving frontal plane control in older adults’ gait. The purposes of this pilot study were to test the feasibility of sideways walking as an exercise intervention and to explore its preliminary effects on risk-of-falling related outcomes.MethodsWe conducted a 6-week single-arm intervention pilot study. Participants were community-dwelling older adults ≥ 65 years old with walking ability. Key exclusion criteria were neuromusculoskeletal and cardiovascular disorders that affect gait. Individualized sideways walking intervention carried out under close supervision in a 200 m indoor walking track (3 days∙week− 1). Recruitment and retention capability, safety, and fidelity of intervention delivery were recorded. We also collected (open-label) walking speed, gait variability, self-reported and performance-based functional measures to assess participants’ risk-of-falling at baseline and post-intervention: immediate, and 6 weeks after the completion of the intervention.ResultsOver a 7-month period, 42 individuals expressed interest, 21 assessed for eligibility (21/42), and 15 consented to participate (15/21). Most of the potential participants were reluctant to commit to a 6-week intervention. Desired recruitment rate was achieved after revising the recruitment strategy. One participant dropped out (1/15). Remaining participants demonstrated excellent adherence to the protocol. Participants improved on most outcomes and the effects remained at follow-up. No serious adverse events were recorded during the intervention.ConclusionOur 6-week sideways walking training was feasible to deliver and demonstrated strong potential as an exercise intervention to improve risk-of-falling outcomes in community-dwelling older adults. In a future trial, alternative clinical tools should be considered to minimize the presence of ceiling/floor effects. A future large trial is needed to confirm sideways walking as a fall prevention intervention.Trial registrationClinicalTrials.gov identifier: NCT04505527. Retrospectively registered 10 August 2020.Trial fundingCenter for Research in Human Movement Variability, National Institutes for Health, University of Nebraska Collaboration Initiative.
Mortality calculator as a possible prognostic predictor of overall survival after gastrectomy in elderly patients with gastric cancer
Authors: Akaike Hidenori , Kawaguchi Yoshihiko , Maruyama Suguru , Shoda Katsutoshi , Satio Ryo , Furuya Shinji , Hosomura Naohiro , Amemiya Hidetake , Kawaida Hiromichi , Sudoh Makoto , Inoue Shingo , Kohno Hiroshi , Ichikawa Daisuke 
Published: August 2020

Abstract
Background: The number of elderly patients with gastric cancer has been increasing. Most elderly patients have associated reduced physiologic functions, that can sometimes become an obstacle to safe surgical treatment. The National Clinical Database Risk Calculator, which based on a large Japanese surgical database, provides mortality and morbidity as the surgical-related risks. The purpose of this study was to investigate the clinical significance of the risk for operative mortality (NRC-mortality), as calculated by the National Clinical Database Risk Calculator, during long-term follow-up after gastrectomy for elderly patients with gastric cancer.Methods: We enrolled 73 patients aged ≥80 years and underwent gastrectomy at our institution. Their surgical risk was evaluated based on the NRC-mortality. Several clinicopathologic factors, including NRC-mortality, were selected, and analyzed as the possible prognostic factors for elderly patients who have undergone gastrectomy for gastric cancer. Statistical analysis was performed using the log-rank test and Cox proportional hazard model.Results: NRC-mortality ranged from 0.5% to 10.6%, and the median value was 1.7%. Dividing the patients according to mortality, the overall survival was significantly worse in the high mortality group (≥1.7%, n = 38) than in the low mortality group (<1.7%, n = 35), whereas disease-specific survival was not different between the two groups. In the Cox proportional hazard model, multivariate analysis revealed NRC-mortality, performance status, and surgical procedure as the independent prognostic factors for overall survival. For disease-specific survival, the independent prognostic factors were performance status and pathological stage but not NRC-mortality.Conclusion: The NRC-mortality might be clinically useful for predicting both surgical mortality and overall survival after gastrectomy in elderly patients with gastric cancer.
Expressing a Cytosolic Pyruvate Dehydrogenase Complex to Increase Free Fatty Acid Production in Saccharomyces Cerevisiae
Authors: Zhang Yiming , Su Mo , Qin Ning , Nielsen Jens , Liu Zihe 
Published: August 2020

Abstract
Background
Saccharomyces cerevisiae is being exploited as a cell factory to produce fatty acids and their derivatives as biofuels. Previous studies found that both precursor supply and fatty acid metabolism deregulation are essential for enhanced fatty acid synthesis. A bacterial pyruvate dehydrogenase (PDH) complex expressed in the yeast cytosol was reported to enable production of cytosolic acetyl-CoA with lower energy cost and no toxic intermediate.
Results
Overexpression of the PDH complex significantly increased cell growth, ethanol consumption and reduced glycerol accumulation. Furthermore, to optimize the redox imbalance in production of fatty acids from glucose, two endogenous NAD+-dependent glycerol-3-phosphate dehydrogenases were deleted, and a heterologous NADP+-dependent glyceraldehyde-3-phosphate dehydrogenase was introduced. The final strain with engineering of precursor and co-factor metabolism could produce 840.5 mg/L free fatty acid in shake flask, which was 83.2% higher than the control strain. Profile analysis of free fatty acid suggested the cytosolic PDH complex mainly resulted in the increases of unsaturated fatty acids (C16:1 and C18:1).
Conclusions
We demonstrated that cytosolic PDH pathway enabled more efficient acetyl-CoA provision with the lower ATP cost, and improved FFA production. Together with engineering of the redox factor rebalance, the cytosolic PDH pathway could achieve high level of FFA production at similar levels of other best acetyl-CoA producing pathways.
Transcriptional response of Bacillus megaterium FDU301 to PEG200-mediated arid stress
Authors: Zhao Lei , Zhou Yanjun , Li Jianbei , Xia Yucheng , Wang Weiyun , Luo Xiuqi , Yin Juan , Zhong Jiang 
Published: August 2020

Abstract
Background
For the microorganisms on the paper surface, the lack of water is one of the most important stress factors. A strain of Bacillus megaterium FDU301 was isolated from plaques on the paper surface using the culture medium with polyethylene glycol 200 (PEG200) to simulate arid condition. Global transcriptomic analysis of B. megaterium FDU301 grown under normal and the simulated arid conditions was performed via RNA-seq technology to identify genes involved in arid stress adaptation.
Results
The transcriptome of B. megaterium FDU301 grown in LB medium under arid (15% PEG200 (w/w)) and normal conditions were compared. A total of 2941 genes were differentially expressed, including 1422 genes up-regulated and 1519 genes down-regulated under arid conditions. Oxidative stress-responsive regulatory genes perR, fur, and tipA were significantly up-regulated, along with DNA protecting protein (dps), catalase (katE). Genes related to Fe2+ uptake (feoB), spore formation stage II (spoIIB, spoIIE, spoIIGA), small acid-soluble spore protein (sspD), and biosynthesis of compatible solute ectoine (ectB, ectA) were also highly expressed to various degrees. Meanwhile, oxidative phosphorylation-related genes (atpB, atpE, atpF, atpH, atpA, atpG, atpD, atpC) and glycolysis-related genes (pgk, tpiA, frmA) were significantly down-regulated.
Conclusion
This is the first report about transcriptomic analysis of a B. megaterium to explore the mechanism of arid resistance. Major changes in transcription were seen in the arid condition simulated by PEG200 (15%), with the most important one being the genes related to oxidative stress. The results showed the complex mechanism for bacteria to adapt to arid stress.