bluuebunny/crossref_metadata_2025_split huggingface dataset:
ST3GAL1 is a target of the SOX2-GLI1 transcriptional complex and promotes melanoma metastasis through AXL
Authors: Pietrobono Silvia , Anichini Giulia , Sala Cesare , Manetti Fabrizio , Almada Luciana L. , Pepe Sara , Carr Ryan M. , Paradise Brooke D. , Sarkaria Jann N. , Davila Jaime I. , Tofani Lorenzo , Battisti Ilaria , Arrigoni Giorgio , Ying Li , Zhang Cheng , Li Hu , Meves Alexander , Fernandez-Zapico Martin E. , Stecca Barbara 
Published: November 2020

AbstractUnderstanding the molecular events controlling melanoma progression is of paramount importance for the development of alternative treatment options for this devastating disease. Here we report a mechanism regulated by the oncogenic SOX2-GLI1 transcriptional complex driving melanoma invasion through the induction of the sialyltransferase ST3GAL1. Using in vitro and in vivo studies, we demonstrate that ST3GAL1 drives melanoma metastasis. Silencing of this enzyme suppresses melanoma invasion and significantly reduces the ability of aggressive melanoma cells to enter the blood stream, colonize distal organs, seed and survive in the metastatic environment. Analysis of glycosylated proteins reveals that the receptor tyrosine kinase AXL is a major effector of ST3GAL1 pro-invasive function. ST3GAL1 induces AXL dimerization and activation that, in turn, promotes melanoma invasion. Our data support a key role of the ST3GAL1-AXL axis as driver of melanoma metastasis, and highlight the therapeutic potential of targeting this axis to treat metastatic melanoma.
Pogz deficiency leads to transcription dysregulation and impaired cerebellar activity underlying autism-like behavior in mice
Authors: Suliman-Lavie Reut , Title Ben , Cohen Yahel , Hamada Nanako , Tal Maayan , Tal Nitzan , Monderer-Rothkoff Galya , Gudmundsdottir Bjorg , Gudmundsson Kristbjorn O. , Keller Jonathan R. , Huang Guo-Jen , Nagata Koh-ichi , Yarom Yosef , Shifman Sagiv 
Published: November 2020

AbstractSeveral genes implicated in autism spectrum disorder (ASD) are chromatin regulators, including POGZ. The cellular and molecular mechanisms leading to ASD impaired social and cognitive behavior are unclear. Animal models are crucial for studying the effects of mutations on brain function and behavior as well as unveiling the underlying mechanisms. Here, we generate a brain specific conditional knockout mouse model deficient for Pogz, an ASD risk gene. We demonstrate that Pogz deficient mice show microcephaly, growth impairment, increased sociability, learning and motor deficits, mimicking several of the human symptoms. At the molecular level, luciferase reporter assay indicates that POGZ is a negative regulator of transcription. In accordance, in Pogz deficient mice we find a significant upregulation of gene expression, most notably in the cerebellum. Gene set enrichment analysis revealed that the transcriptional changes encompass genes and pathways disrupted in ASD, including neurogenesis and synaptic processes, underlying the observed behavioral phenotype in mice. Physiologically, Pogz deficiency is associated with a reduction in the firing frequency of simple and complex spikes and an increase in amplitude of the inhibitory synaptic input in cerebellar Purkinje cells. Our findings support a mechanism linking heterochromatin dysregulation to cerebellar circuit dysfunction and behavioral abnormalities in ASD.
Two nuclear effectors of the rice blast fungus modulate host immunity via transcriptional reprogramming
Authors: Kim Seongbeom , Kim Chi-Yeol , Park Sook-Young , Kim Ki-Tae , Jeon Jongbum , Chung Hyunjung , Choi Gobong , Kwon Seomun , Choi Jaeyoung , Jeon Junhyun , Jeon Jong-Seong , Khang Chang Hyun , Kang Seogchan , Lee Yong-Hwan 
Published: November 2020

AbstractPathogens utilize multiple types of effectors to modulate plant immunity. Although many apoplastic and cytoplasmic effectors have been reported, nuclear effectors have not been well characterized in fungal pathogens. Here, we characterize two nuclear effectors of the rice blast pathogen Magnaporthe oryzae. Both nuclear effectors are secreted via the biotrophic interfacial complex, translocated into the nuclei of initially penetrated and surrounding cells, and reprogram the expression of immunity-associated genes by binding on effector binding elements in rice. Their expression in transgenic rice causes ambivalent immunity: increased susceptibility to M. oryzae and Xanthomonas oryzae pv. oryzae, hemibiotrophic pathogens, but enhanced resistance to Cochliobolus miyabeanus, a necrotrophic pathogen. Our findings help remedy a significant knowledge deficiency in the mechanism of M. oryzae–rice interactions and underscore how effector-mediated manipulation of plant immunity by one pathogen may also affect the disease severity by other pathogens.
Perfect absorption in complex scattering systems with or without hidden symmetries
Authors: Chen Lei , Kottos Tsampikos , Anlage Steven M. 
Published: November 2020

AbstractWavefront shaping (WFS) schemes for efficient energy deposition in weakly lossy targets is an ongoing challenge for many classical wave technologies relevant to next-generation telecommunications, long-range wireless power transfer, and electromagnetic warfare. In many circumstances these targets are embedded inside complicated enclosures which lack any type of (geometric or hidden) symmetry, such as complex networks, buildings, or vessels, where the hypersensitive nature of multiple interference paths challenges the viability of WFS protocols. We demonstrate the success of a general WFS scheme, based on coherent perfect absorption (CPA) electromagnetic protocols, by utilizing a network of coupled transmission lines with complex connectivity that enforces the absence of geometric symmetries. Our platform allows for control of the local losses inside the network and of the violation of time-reversal symmetry via a magnetic field; thus establishing CPA beyond its initial concept as the time-reversal of a laser cavity, while offering an opportunity for better insight into CPA formation via the implementation of semiclassical tools.
Consistent population declines but idiosyncratic range shifts in Alpine orchids under global change
Authors: Geppert Costanza , Perazza Giorgio , Wilson Robert J. , Bertolli Alessio , Prosser Filippo , Melchiori Giuseppe , Marini Lorenzo 
Published: November 2020

AbstractMountains are plant biodiversity hotspots considered particularly vulnerable to multiple environmental changes. Here, we quantify population changes and range-shift dynamics along elevational gradients over the last three decades for c. two-thirds of the orchid species of the European Alps. Local extinctions were more likely for small populations, after habitat alteration, and predominated at the rear edge of species’ ranges. Except for the most thermophilic species and wetland specialists, population density decreased over time. Declines were more pronounced for rear-edge populations, possibly due to multiple pressures such as climate warming, habitat alteration, and mismatched ecological interactions. Besides these demographic trends, different species exhibited idiosyncratic range shifts with more than 50% of the species lagging behind climate warming. Our study highlights the importance of long-term monitoring of populations and range distributions at fine spatial resolution to be able to fully understand the consequences of global change for orchids.
STAT2 signaling restricts viral dissemination but drives severe pneumonia in SARS-CoV-2 infected hamsters
Authors: Boudewijns Robbert , Thibaut Hendrik Jan , Kaptein Suzanne J. F. , Li Rong , Vergote Valentijn , Seldeslachts Laura , Van Weyenbergh Johan , De Keyzer Carolien , Bervoets Lindsey , Sharma Sapna , Liesenborghs Laurens , Ma Ji , Jansen Sander , Van Looveren Dominique , Vercruysse Thomas , Wang Xinyu , Jochmans Dirk , Martens Erik , Roose Kenny , De Vlieger Dorien , Schepens Bert , Van Buyten Tina , Jacobs Sofie , Liu Yanan , Martí-Carreras Joan , Vanmechelen Bert , Wawina-Bokalanga Tony , Delang Leen , Rocha-Pereira Joana , Coelmont Lotte , Chiu Winston , Leyssen Pieter , Heylen Elisabeth , Schols Dominique , Wang Lanjiao , Close Lila , Matthijnssens Jelle , Van Ranst Marc , Compernolle Veerle , Schramm Georg , Van Laere Koen , Saelens Xavier , Callewaert Nico , Opdenakker Ghislain , Maes Piet , Weynand Birgit , Cawthorne Christopher , Vande Velde Greetje , Wang Zhongde , Neyts Johan , Dallmeier Kai 
Published: November 2020

AbstractEmergence of SARS-CoV-2 causing COVID-19 has resulted in hundreds of thousands of deaths. In search for key targets of effective therapeutics, robust animal models mimicking COVID-19 in humans are urgently needed. Here, we show that Syrian hamsters, in contrast to mice, are highly permissive to SARS-CoV-2 and develop bronchopneumonia and strong inflammatory responses in the lungs with neutrophil infiltration and edema, further confirmed as consolidations visualized by micro-CT alike in clinical practice. Moreover, we identify an exuberant innate immune response as key player in pathogenesis, in which STAT2 signaling plays a dual role, driving severe lung injury on the one hand, yet restricting systemic virus dissemination on the other. Our results reveal the importance of STAT2-dependent interferon responses in the pathogenesis and virus control during SARS-CoV-2 infection and may help rationalizing new strategies for the treatment of COVID-19 patients.
Proto-oncogene Src links lipogenesis via lipin-1 to breast cancer malignancy
Authors: Song Lintao , Liu Zhihua , Hu Hui-Hui , Yang Ying , Li Terytty Yang , Lin Zhi-Zhong , Ye Jing , Chen Jianing , Huang Xi , Liu Dong-Tai , Zhou Jing , Shi Yiran , Zhao Hao , Xie Changchuan , Chen Lanfen , Song Erwei , Lin Shu-Yong , Lin Sheng-Cai 
Published: November 2020

AbstractIncreased lipogenesis has been linked to an increased cancer risk and poor prognosis; however, the underlying mechanisms remain obscure. Here we show that phosphatidic acid phosphatase (PAP) lipin-1, which generates diglyceride precursors necessary for the synthesis of glycerolipids, interacts with and is a direct substrate of the Src proto-oncogenic tyrosine kinase. Obesity-associated microenvironmental factors and other Src-activating growth factors, including the epidermal growth factor, activate Src and promote Src-mediated lipin-1 phosphorylation on Tyr398, Tyr413 and Tyr795 residues. The tyrosine phosphorylation of lipin-1 markedly increases its PAP activity, accelerating the synthesis of glycerophospholipids and triglyceride. Alteration of the three tyrosine residues to phenylalanine (3YF-lipin-1) disables lipin-1 from mediating Src-enhanced glycerolipid synthesis, cell proliferation and xenograft growth. Re-expression of 3YF-lipin-1 in PyVT;Lpin1−/−mice fails to promote progression and metastasis of mammary tumours. Human breast tumours exhibit increased p-Tyr-lipin-1 levels compared to the adjacent tissues. Importantly, statistical analyses show that levels of p-Tyr-lipin-1 correlate with tumour sizes, lymph node metastasis, time to recurrence and survival of the patients. These results illustrate a direct lipogenesis-promoting role of the pro-oncogenic Src, providing a mechanistic link between obesity-associated mitogenic signaling and breast cancer malignancy.
Alkyl halides as both hydride and alkyl sources in catalytic regioselective reductive olefin hydroalkylation
Authors: Chen Xianxiao , Rao Weidong , Yang Tao , Koh Ming Joo 
Published: November 2020

AbstractAmong the plethora of catalytic methods developed for hydrocarbofunctionalization of olefins to date, reactions that regioselectively install a functionalized alkyl unit at the 2-position of a terminal unactivated C=C bond to afford branched products are scarce. Here, we show that a Ni-based catalyst in conjunction with a stoichiometric reducing agent promote Markovnikov-selective hydroalkylation of unactivated alkenes tethered to a recyclable 8-aminoquinaldine directing auxiliary. These mild reductive processes employ readily available primary and secondary haloalkanes as both the hydride and alkyl donor. Reactions of alkenyl amides with ≥ five-carbon chain length regioselectively afforded β-alkylated products through remote hydroalkylation, underscoring the fidelity of the catalytic process and the directing group’s capability in stabilizing five-membered nickelacycle intermediates. The operationally simple protocol exhibits exceptional functional group tolerance and is amenable to the synthesis of bioactive molecules as well as regioconvergent transformations.
The impact of nitrogen oxides on electrochemical carbon dioxide reduction
Authors: Ko Byung Hee , Hasa Bjorn , Shin Haeun , Jeng Emily , Overa Sean , Chen Wilson , Jiao Feng 
Published: November 2020

AbstractThe electroreduction of carbon dioxide offers a promising avenue to produce valuable fuels and chemicals using greenhouse gas carbon dioxide as the carbon feedstock. Because industrial carbon dioxide point sources often contain numerous contaminants, such as nitrogen oxides, understanding the potential impact of contaminants on carbon dioxide electrolysis is crucial for practical applications. Herein, we investigate the impact of various nitrogen oxides, including nitric oxide, nitrogen dioxide, and nitrous oxide, on carbon dioxide electroreduction on three model electrocatalysts (i.e., copper, silver, and tin). We demonstrate that the presence of nitrogen oxides (up to 0.83%) in the carbon dioxide feed leads to a considerable Faradaic efficiency loss in carbon dioxide electroreduction, which is caused by the preferential electroreduction of nitrogen oxides over carbon dioxide. The primary products of nitrogen oxides electroreduction include nitrous oxide, nitrogen, hydroxylamine, and ammonia. Despite the loss in Faradaic efficiency, the electrocatalysts exhibit similar carbon dioxide reduction performances once a pure carbon dioxide feed is restored, indicating a negligible long-term impact of nitrogen oxides on the catalytic properties of the model catalysts.
Learning by task repetition enhances object individuation and memorization in the elderly
Authors: Tagliabue Chiara F. , Assecondi Sara , Cristoforetti Giulia , Mazza Veronica 
Published: November 2020

AbstractA decline in visuospatial Working Memory (vWM) is a hallmark of cognitive aging across various tasks, and facing this decline has become the target of several studies. In the current study we tested whether older adults can benefit from task repetition in order to improve their performance in a vWM task. While learning by task repetition has been shown to improve vWM performance in young adulthood, little is known on whether a similar enhancement can be achieved also by the aging population. By combining different behavioral and electrophysiological measures, we investigated whether practicing a specific task (delayed match-to-sample judgement) over four consecutive sessions could improve vWM in healthy aging, and which are the neurophysiological and cognitive mechanisms modulated by learning. Behavioral data revealed that task repetition boosted performance in older participants, both in terms of sensitivity to change (as revealed by d’ measures) as well as capacity estimate (as measured by k values). At the electrophysiological level, results indicated that only after task repetition both target individuation (as evidenced by the N2pc) and vWM maintenance (as reflected by the CDA) were modulated by target numerosity. Our results suggest that repetition learning is effective in enhancing vWM in aging and acts through modifications at different stages of stimulus processing.
p-Phenylenediaminium iodide capping agent enabled self-healing perovskite solar cell
Authors: Zardari Parisa , Rostami Ali , Shekaari Hemayat 
Published: November 2020

AbstractIn this study, p-Phenylenediaminium iodide (PDAI) is used to in-situ growth of 2D (PDA)2PbI4 perovskite layer between (FAPbI3)0.85(MAPbBr3)0.15 3D perovskite and CuSCN as a cheap hole transport layer. The results indicate that the incorporation of 5 mg mL−1 PDAI leads to enlarged grain sizes, compact grain boundaries, reduced trap density, efficient charge extraction, and enhanced stability of perovskite film. Passivation of perovskite film with the appropriate amount of PDAI helps in achieving efficient perovskite solar cell with a PCE as high as 16.10%, a JSC of 21.45 mA cm−2, a VOC of 1.09 V, and FF of 70.21%, with negligible hysteresis and excellent moisture stability which remains 99.01% of its initial PCE value after 5 h in high relative humidity of 90 ± 5% and shows unchanged PCE after 1440 h in low relative humidity of 15 ± 5%. Most strikingly, this ultra-thin 2D passivation layer by the use of PDA cations as a bulky spacer not only passivates the defects on the surface of perovskite film but also induces self-healing properties in PSCs which can be rapidly recovered after keeping away from water vapor exposure. This study introduces the cheap and extra stable perovskite solar cells with outstanding self-healing ability towards commercialization.
Effects of feeding on the physiological performance of the stony coral Pocillopora acuta
Authors: Huang Yan-Leng , Mayfield Anderson B. , Fan Tung-Yung 
Published: November 2020

AbstractReef-building corals rely on both heterotrophy and endosymbiotic dinoflagellate autotrophy to meet their metabolic needs. Those looking to culture these organisms for scientific or industrial purposes must therefore consider both feeding regimes and the light environment. Herein the effects of three photosynthetically active radiation (PAR) levels were assessed in fed and unfed specimens of the model coral Pocillopora acuta that were cultured in a recirculating aquaculture system (RAS). Half of the corals were fed Artemia sp. brine shrimp in a separate feeding tank to prevent biofouling, and fragments were exposed to PAR levels of 105, 157, or 250 μmol quanta m−2 s−1 over a 12-h period each day. All cultured corals survived the 140-day treatment, and the physiological response variables assessed-buoyant weight, specific growth rate, linear extension, color, and Fv/Fm-were significantly influenced by feeding, and, to a lesser extent, light. Specifically, fed corals grew faster and larger, and presented darker pigmentation; corals fed at the highest light levels grew at the fastest rate (6 cm year−1 or 175 mg g−1 week−1). Given the high physiological performance observed, we advocate the active feeding of brine shrimp in RAS by those looking to cultivate P. acuta, and likely other corals, over long-term timescales.
Synaptic migration and reorganization after noise exposure suggests regeneration in a mature mammalian cochlea
Authors: Hickman Tyler T. , Hashimoto Ken , Liberman Leslie D. , Liberman M. Charles 
Published: November 2020

AbstractOverexposure to intense noise can destroy the synapses between auditory nerve fibers and their hair cell targets without destroying the hair cells themselves. In adult mice, this synaptopathy is immediate and largely irreversible, whereas, in guinea pigs, counts of immunostained synaptic puncta can recover with increasing post-exposure survival. Here, we asked whether this recovery simply reflects changes in synaptic immunostaining, or whether there is actual retraction and extension of neurites and/or synaptogenesis. Analysis of the numbers, sizes and spatial distribution of pre- and post-synaptic markers on cochlear inner hair cells, in guinea pigs surviving from 1 day to 6 months after a synaptopathic exposure, shows dramatic synaptic re-organization during the recovery period in which synapse counts recover from 16 to 91% of normal in the most affected regions. Synaptic puncta move all over the hair cell membrane during recovery, translocating far from their normal positions at the basolateral pole, and auditory-nerve terminals extend towards the hair cell’s apical end to re-establish contact with them. These observations provide stronger evidence for spontaneous neural regeneration in a mature mammalian cochlea than can be inferred from synaptic counts alone.
An insight into the electro-chemical properties of halogen (F, Cl and Br) doped BP and BN nanocages as anodes in metal-ion batteries
Authors: Abedi Maryam , Eslami Mohammad , Ghadiri Mahdi , Mohammadinia Samira 
Published: November 2020

AbstractHere, electro-chemical properties of BN and BP nanocages as anodes in metal-ion batteries are examined. The effect of halogens adoption of BN and BP-NCs on electro-chemical properties of M-IBs are investigated. Results showed that the BP nanocages as anode electrode in M-IBs has higher efficiency than BN nanocages and the K-IB has higher cell voltage than N-IBs. Results indicated that the halogens adoption of BN and BP-NCs are improved the cell voltage of M-IBs. Results proved that the F-doped M-IBs have higher cell voltage than M-IBs. Finally, F-B17P18 as anodes in K-IB is proposed as suitable electrodes.
The use of prostate specific antigen density to predict clinically significant prostate cancer
Authors: Yusim Igor , Krenawi Muhammad , Mazor Elad , Novack Victor , Mabjeesh Nicola J. 
Published: November 2020

AbstractThe purpose of this study was to assess the predictive value of prostate specific antigen density (PSAD) for detection of clinically significant prostate cancer in men undergoing systematic transrectal ultrasound (TRUS)-guided prostate biopsy. We retrospectively analyzed data of men who underwent TRUS-guided prostate biopsy because of elevated PSA (≤ 20 ng/ml) or abnormal digital rectal examination. Receiver operating characteristic curve analysis to compare PSA and PSAD performance and chi-square automatic interaction detector methodologies were used to identify predictors of clinically significant cancer (Gleason score ≥ 7 or international society of urological pathology grade group ≥ 2). Nine-hundred and ninety-two consecutive men with a median age of 66 years (IQR 61–71) were included in the study. Median PSAD was 0.10 ng/ml2 (IQR 0.10–0.22). Prostate adenocarcinoma was diagnosed in 338 men (34%). Clinically significant prostate adenocarcinoma was diagnosed in 167 patients (50% of all cancers and 17% of the whole cohort). The AUC to predict clinically significant prostate cancer was 0.64 for PSA and 0.78 for PSAD (P < 0.001). The highest Youden's index for PSAD was at 0.20 ng/ml2 with 70% sensitivity and 79% specificity for the diagnosis of clinically significant cancer. Men with PSAD < 0.09 ng/ml2 had only 4% chance of having clinically significant disease. The detection rate of clinically significant prostate cancer in patients with PSAD between 0.09 and 0.19 ng/ml2 was significantly higher when prostate volume was less than 33 ml. In conclusion, PSAD was a better predictor than PSA alone of clinically significant prostate cancer in patients undergoing TRUS-guided biopsy. Patients with PSAD below 0.09 ng/ml2 were unlikely to harbor clinically significant prostate cancer. Combining PSAD in the gray zone (0.09–0.19) with prostate volume below 33 ml adds diagnostic value of clinically significant prostate cancer.