bluuebunny/crossref_metadata_2025 huggingface dataset:
Genetic variability among and within races of Heterodera glycines Ichinohe assessed by RAPD markers
Authors: Silva Adailton T. da , Penna Júlio C.V. , Goulart Luiz R. , Santos Maria A. dos , Arantes Neylson E.
Published: April 2005

Heterodera glycines Ichinohe, the soybean cyst nematode (SCN) was detected in Brazil in 1992 and since then it has been causing losses to Brazilian soybean crop yields. SCN populations have great genetic diversity which makes it difficult to manage this disease. The objectives of this research were to investigate the genetic variation of 16 SCN populations sampled in middle western and southeastern Brazil, utilizing random amplified polymorphic DNA (RAPD) techniques, and to establish useful and specific RAPD markers for SCN race 3. RAPD markers demonstrated genetic variability among and within SCN populations, and they could be used for monitoring nematode population dynamics. The OPA-07 primer was a reliable molecular marker for race 3, while electrophoretic profile analysis of DNA fragments amplified with OPA-10 primer detected slight variation within those populations identified as race 3. The SCN population from Chapadão do Céu, GO - sample 2 - was the most genetically distant from the other populations.
Characterization of ribosomal DNA (rDNA) in Drosophila arizonae
Authors: Javier Tovar Francisco , Silva Luiz Antônio Ferreira da , Rodarte Renato Santos , Leoncini Orilio
Published: April 2005

Ribosomal DNA (rDNA) is a multigenic family composed of one or more clusters of repeating units (RU). Each unit consists of highly conserved sequences codifying 18S, 5.8S and 28S rRNA genes intercalated with poorly conserved regulatory sequences between species. In this work, we analyzed the rDNA of Drosophila arizonae, a member of the mulleri complex (Repleta group). Using genomic restriction patterns, cloning and mapping of some representative rDNA fragments, we were able to construct a representative restriction map. RU in this species are 13.5-14 kb long, restriction sites are completely conserved compared with other drosophilids and the rDNA has an R1 retrotransposable element in some RU. We were unable to detect R2 elements in this species.
Asymptotic weight and maturing rate in mice selected for body conformation
Authors: Di Masso Ricardo J. , Silva Patricia S. , Font María Teresa
Published: April 2005

Growth patterns of four lines of mice selected for body conformation were analyzed with the logistic function, in order to provide baseline information about the relationship between asymptotic weight and maturing rate of body weight. Two lines were divergently selected favoring the phenotypic correlation between body weight and tail length (agonistic selection: CBi+, high body weight and long tail; CBi-, low body weight and short tail), whereas the other two lines were generated by a disruptive selection performed against the correlation between the aforementioned traits (antagonistic selection: CBi/C, high body weight and short tail; CBi/L, low body weight and long tail). The logistic parameters A (asymptotic weight) and k (maturing rate) behaved in CBi/C and CBi- mice and in CBi+ females as expected in terms of the negative genetic relationship between mature size and earliness of maturing. An altered growth pattern was found in CBi/L mice and in CBi+ males, because in the former genotype, selected for low body weight, the time taken to mature increased, whereas in the latter, selected for high body weight, there was a non-significant increase in the same trait. In accordance with the selective criterion, different sources of genetic variation for body weight could be exploited: one inversely associated with earliness of maturing (agonistic selection), and the other independent of maturing rate (antagonistic selection), showing that genetic variation of A is partly independent of k.
Genetic diversity in a Brazilian bovine herd based on four microsatellite loci
Authors: Almeida Sabrina E. Matos , Machado Márcia S.N. , Steigleder Clara Sabina , Gama Cleonice L. , Hutz Mara Helena , Henkes Luiz Ernani , Moraes José Carlos F. , Weimer Tania de Azevedo
Published: April 2005

Microsatellites or short tandem repeats (STRs), DNA markers relatively abundant in the genome, have a high degree of polymorphism and therefore great potential for characterizing populations. The present study estimates genetic variability in a set of four microsatellites (BMS3013, BMS3004, HEL10 and TGLA122) in a Brazilian hybrid bovine breed (5/8 Aberdeen Angus x 3/8 Nelore). The objectives were to determine the effect of crossbreeding and selection in these animals' genetic diversity as well as to discover the herd's genetic relationship with that of other breeds. Low diversity was verified in BMS3013 and high diversity was detected in BMS3004, HEL10 and TGLA122. Two alleles in TGLA122 are described here for the first time (TGLA122*155 and TGLA122*163). These genes are possibly characteristics of Zebu animals since they have not been found in other taurine samples so far investigated. Low interpopulational diversity was observed among taurine cattle populations, and clusters obtained on TGLA122 phylogenetic trees agreed with the bovine herd's geographic origin. Therefore, despite TGLA122's high polymorphism and high levels of intrapopulational diversity, the system engenders consistent bovine phylogenies. We detected an intriguingly high similarity between Brangus Ibagé and Red Angus since the former is a hybrid having 3/8 of Nelore genes. Either these animals' environment or genetic selective practices applied to the breed probably favor the Angus genotype.
Mitochondrial DNA polymorphism and heteroplasmy in populations of the three species of Tropidurus of the nanuzae group (Squamata, Tropiduridae)
Authors: Passoni José Carlos , Benozzati Maria Lúcia , Rodrigues Miguel Tréfaut
Published: April 2005

The nanuzae group of lizards includes three species, Tropidurus nanuzae, T. divaricatus and T. amathites. The first species is found along Serra do Espinhaço, in eastern Brazil, and the other two in the northern region of the Brazilian State of Bahia, in continental dunes on both margins of the São Francisco River. Restriction fragment length polymorphisms (RFLP) of the mtDNA in these species were detected in 53 restriction sites. Site and fragment length polymorphisms were characterized, and cases of heteroplasmy involving length variation were observed. In T. divaricatus, these variations involved changes of 50-200 bp, probably in the control region of the molecule. In T. amathites, variation was apparently due to duplication/deletion of a 400-bp segment. Fragment length mutation rate varied among the species, being smaller in T. amathites than in T. divaricatus. Relatively low nucleotide diversity values were detected in these populations, the smallest being found in T. nanuzae. The most polymorphic population was T. divaricatus from Alagoado, followed by that of the same species from Ibiraba, suggesting both probable recovery of mtDNA genetic diversity after putative reductions in population size, and recent population expansion.
Aspects of gene regulation in the diploid and tetraploid Odontophrynus americanus (Amphibia, Anura, Leptodactylidae)
Authors: Cianciarullo Aurora M. , Naoum Paulo C. , Bertho Álvaro L. , Kobashi Leonardo S. , Beçak Willy , Soares Maurilio J.
Published: April 2005

Erythropoietic and hemoglobin DNA transcriptional activities were analyzed in the diploid and the tetraploid Odontophrynus americanus. Flow cytometric analyses of DNA, RNA and mitochondrial contents showed increased genic activity in both diploid and tetraploid animals during erythropoiesis in vivo elicited by pretreatment phenylhydrazine. Generally, higher values were seen in immature tetraploid erythroid cells. On the 10th day of recovery from anemia, large amounts of messenger RNA were found in both specimens. Based on the mitochondrial content, the tetraploid cells had more intense energy metabolism than the diploid cells. Diploid O. americanus had about three times more erythroid cells than tetraploid specimens, indicating that there were differences in the regulatory mechanisms of erythroid cells. Hematological parameters showed that tetraploid cells had 30% more hemoglobin than the diploid, suggesting a regulatory mechanism of hemoglobin synthesis at the transcriptional level. Cytoplasmic inclusions resembling Heinz bodies were found in both types of cells. In the tetraploid cells they were previously found associated with RNA or RNP, suggesting that other regulatory system which controls the accumulation of nontranslated RNA transcribed in excess must be present. These differences at the physiological and molecular levels during erythropoiesis reinforce the hypothesis that speciation is occurring between diploid and tetraploid O. americanus.
Study of the karyotype of Oryzoborus maximiliani (Passeriformes - Aves) using young feather pulp cultures
Authors: Goldschmidt Beatriz , Nogueira Denise Monnerat , Silva Katia Pacheco Araujo , Souza Lucia Moreno de
Published: April 2005

The investigation of the karyotype of Oryzoborus maximiliani in living birds utilizing young feather pulp culture is described. The species karyotype was established as 2n = 72 with unequivocal identification of the sexual chromosome pair. Evolutionary considerations are raised.
Diallel crosses among maize lines with emphasis on resistance to foliar diseases
Authors: Paterniani Maria Elisa Ayres Guidetti Zagatto , Sawazaki Eduardo , Dudienas Christina , Duarte Aildson Pereira , Gallo Paulo Boller
Published: April 2005

Ten elite maize (Zea mays L.) lines were crossed in a complete diallel scheme and the single-cross hybrids obtained were assessed at four experimental stations of the Agronomic Institute of Campinas, in São Paulo State, Brazil. The experiments were set up in a randomized complete block design with three replications, including four commercial checks. The experimental plots consisted of two 5-m rows spaced at 0.9 m, with a total of 50 plants. The traits assessed included: days to mid-tassel pollen shed (DPS), plant height (PH), ear height (EH), grain yield, corrected for a 50-plant stand and 14% moisture (GY corr.), and resistance to Phaeosphaeria maydis and Puccinia polysora. General and specific combining ability effects (GCA and SCA) were determined. There was extensive genetic variability among hybrids with the best hybrids (HS 04 x 10 and HS 10 x 11) not differing from the commercial checks. The lines with the greatest potential for hybrid synthesis included: L 10, L 11 and L 13, because they had higher GCA for yield, moderate resistance to P. maydis and reduced EH. The greatest contribution to reduction of the Phaeosphaeria stain was obtained with L 5. The magnitude of the GCA relative to the total variation indicated that additive effects predominated for resistance to P. maydis and P. polysora. Significant SCA (P < 0.01) was also found, indicating dominance effects as well.
RAPD markers linked to a block of genes conferring rust resistance to the common bean
Authors: Faleiro Fábio Gelape , Vinhadelli Wender Santos , Ragagnin Vilmar Antonio , Corrêa Ronan Xavier , Moreira Maurilio Alves , Barros Everaldo Gonçalves de
Published: April 2005

Rust, caused by the fungus Uromyces appendiculatus, may cause a significant loss to common bean (Phaseolus vulgaris L.) yield. RAPD markers tightly linked to the resistance genes may be used in breeding programs to aid the development of rust-resistant bean cultivars. In this sense, the objective of the present work was to identify RAPD markers linked to a rust resistance gene block present in the cultivar Ouro Negro. Two hundred and fourteen F2 individuals from a cross between the resistant cultivar Ouro Negro and the susceptible cultivar US Pinto 111 were inoculated with a mixture of eight races of U. appendiculatus. The segregation ratio obtained suggested that resistance is monogenic and dominant. Bulked segregant analysis was used in conjunction with the RAPD technique to search for markers linked to rust resistance genes. Two molecular markers flanking the rust resistance gene block were identified, one at 5.8 ± 1.6 cM (OX11(630)) and the other at 7.7 ± 1.7 cM (OF10(1,050)) of the gene. Simulated indirect selection efficiency in the F2 population using the two markers was 100%. The molecular markers identified in this work are currently being used for the selection of disease-resistant plants in the commom bean breeding program of the Federal University of Viçosa.
Family number in common bean selection
Authors: Ferreira Wilton Duarte , Ramalho Magno Antonio Patto , Ferreira Daniel Furtado , Souza Moacil Alves de
Published: April 2005

The objective of the present study was to determine the number of families necessary for selection in a segregant population. Nine segregant populations from the bean improvement program of the Federal University of Lavras were evaluated. The number of families varied from 169 to 295, and the average family heritability estimate (h²) for grain production varied from 5.3 to 82.0%. Different sample sizes were simulated using the average family performance. The first sample consisted of 30 families, with each additional sample containing 10 more families, until the total number of families evaluated was reached for each population. One thousand simulations per sample size were performed. These data were used to determine the average, minimum and maximum phenotypic variance and the standard error of the variance. The probability of occurrence of a certain level of phenotypic variance for the corresponding values of 0.0, 0.25, 0.50 and 0.75 of heritability was determined for all families, using a chi² distribution. Based on the results obtained and considering the experimental precision and conditions of the bean improvement programs in this region, the use of less than 100 families would reduce the probability of successful selection.
Genetic relatedness between cassava (Manihot esculenta Crantz) and M. flabellifolia and M. Peruviana based on both RAPD and AFLP markers
Authors: Colombo Carlos , Second Gérard , Charrier André
Published: April 2005

The taxonomy of the genus Manihot is still uncertain and the genetic origin of cassava (M. esculenta Crantz) continues to be controversial. We studied the degree of genetic relatedness between cassava and two naturally occurring species (M. flabellifolia and M. peruviana) which are probably involved in the evolution of cassava, using RAPD and AFLP molecular markers. Thirty-three clonal accessions of cassava of known genetic diversity and 15 accessions of the wild species M. flabellifolia and M. peruviana were analyzed using 92 polymorphic RAPD bands and 73 polymorphic AFLP bands. The genetic markers were unable to differentiate the two wild species, which confirms their botanical similarity. Half of the total number of amplified bands were monomorphic in all of the genotypes evaluated. The mean genetic similarity (Jaccard) between cassava and the species M. flabellifolia/M. peruviana was 0.59. A grouping analysis (neighbor-joining method) with RAPD markers of cultivated cassava, M. flabellifolia/M. peruviana and the other wild species located the genotypes of cassava and M. flabellifolia/M. peruviana at one extremity and the three Mexican species (M. aesculifolia, M. michaelis and M. chlorostica) at the other. An intermediate position between these groups was occupied by two wild species (M. glaziovii and M. reptans) native to central and northeastern Brazil. These results are consistent with the hypothesis that the species M. flabellifolia and M. peruviana gave rise to the cultivated species.
A rat pancreatic ribonuclease fused to a late cotton pollen promoter severely reduces pollen viability in tobacco plants
Authors: Bernd-Souza R.B. , Sa M.F. Grossi de , Ellis D.D. , McCown B.H.
Published: April 2005

The effects of an animal RNase fused to the late cotton pollen-specific promoter G9 in a plant system were investigated. Expression of the chimeric genes G9-uidA and G9-RNase in tobacco plants showed that the 1.2-kb promoter fragment of the G9 gene was sufficient to maintain tissue and temporal specificity in a heterologous system. GUS (beta-glucuronidase) expression was detected only in pollen from anther stage 6 through anthesis, with maximal GUS activity in pollen from stage 10 anthers. Investigating the effects of the rat RNase on pollen viability at stage 10, we found that pollen viability was reduced from 79 to 8% and from 89 to 40%, in pollen germination and fluoresceine diacetate assays, respectively, in one G9-RNase transgenic line, suggesting a lethal effect of the RNase gene. This indicates that the rat RNase produces deleterious effects in this plant system and may be useful for engineering male sterility.
Maximization of genetic gain in rubber tree (Hevea) breeding with effective size restriction
Authors: Costa Reginaldo Brito da , Resende Marcos Deon Vilela de , Araújo Antônio José de , Gonçalves Paulo de Souza , Silva Marcelo de Almeida
Published: April 2005

The heritability coefficients and the genetic gains associated with individual, combined and among and within progeny selection, and with multi-effect index selection in long-term rubber tree [Hevea brasiliensis (Willd. ex Adr. de Juss.) Muell.-Arg.] breeding were determined using effective population size (Ne) restriction. Twenty-two half sib progenies were planted at the Jaú Experimental Station, São Paulo State, Brazil, in a complete randomized block design, with five replications and 10 plants per plot. The following traits were assessed when the plants were three years old: number of laticiferous vessel rings (NR), dry rubber production (RP), bark thickness (BT) and stem girth (SG). Significant variability was found among progeny with good chances of obtaining genetic gain for RP, BT and SG. Effective population size restriction caused a greater reduction in genetic gain for RP with combined selection and with the multi-effect index than for individual or among and within progeny selection. The simultaneous use of accuracy values and genetic gain from the lower limits of the confidence intervals for gain indicated that individual selection is to be preferred in Hevea breeding programs.
Multivariate analysis as a tool for measuring the stability of morphometric traits in Lycopersicon plants from in vitro culture
Authors: Pratta Guillermo , Zorzoli Roxana , Picardi Liliana Amelia
Published: April 2005

The phenotypic stability of morphometric traits in Lycopersicon spp. (stem perimeter at the base, middle and top, and number of flowers per cluster) was measured by multivariate analysis through a progeny test in order to estimate the genetic stability of these traits. Principal components were calculated for two groups of Lycopersicon spp., non-regenerated plants and the progeny of regenerated plants. Analysis of variance was performed to support principal component analysis. Both groups presented similar eigenvalues and eigenvectors, while no significant differences were found between any of the traits studied. These results indicated that the phenotypic structure was the same among the progeny of regenerated and non-regenerated plants, so that no variation would occur in in vitro culture. Multivariate analysis proved to be an appropriate methodology for the measurement of the stability of morphometric traits after one regeneration cycle.
Evaluation of occupational genotoxic risk in a Brazilian hospital
Authors: Maluf Sharbel Weidner , Erdtmann Bernardo
Published: April 2005

Many therapeutic, diagnostic and prophylactic procedures used in hospitals are of potential genetic risk. An evaluation was made of genotoxic occupational risk in 42 workers from the Hospital de Clínicas de Porto Alegre, RS, Brazil, who had been occupationally exposed to lead (solder), ethylene oxide (sterilization area), antineoplastic drugs (nurses and pharmacists) or ionizing radiation. They were compared with 42 unexposed individuals. There was an increase in the frequency of binucleated cytochalasin-blocked lymphocytes with micronuclei, though it was not significant (P = 0.058). The groups exposed to antineoplastic drugs and radiation had a significant increase in micronuclei frequency (P = 0.038 and P = 0.022, respectively). The high frequencies of dicentric bridges suggest the action of clastogenics in these two groups. These results suggest that the safety procedures adopted were very important to protect workers from exposure to mutagenic agents and should be improved in the radiological and chemotherapeutical areas.
Detection of trisomy 12 by fluorescent in situ hybridization (FISH) in chronic lymphocytic leukemia
Authors: Chauffaille Maria de Lourdes L.F. , Marques Eliana Azevedo , Oliveira Jose Salvador Rodrigues de , Rodrigues Maria Madalena , Figueiredo Maria Stella , Romeo Maura , Yamamoto Mihoko , Kerbauy José
Published: April 2005

Chronic lymphocytic leukemia (CLL) presents a varying incidence of karyotypic abnormalities whose detection is complicated by difficulties in obtaining mitosis for analysis in this type of mature lymphocyte disorder. Since the introduction of molecular cytogenetics (FISH = fluorescent in situ hybridization), applying centromeric probes for chromosome 12 has made it possible to detect a higher percentage of trisomy 12 cases. The objective of the present study was to detect trisomy 12 by FISH (alpha satellite probe) in 13 patients with CLL whose karyotypes by G-banding were either normal or inadequate. Using this method trisomy 12 was detected in three patients in a percentage of positive cells varying from 55.5% to 79%, showing that FISH is a sensitive and highly specific method for trisomy detection and should be routinely performed when the karyotype is normal.
Partial duplication of chromosome 20(pter->q12)
Authors: Della-Rosa Valter Augusto , Vianna-Morgante Angela M.
Published: April 2005

Partial duplication of chromosome 20 (20pter->20q12) resulting from a maternally inherited translocation t(14;20)(q11;q13) is described in a female child with neuropsychomotor retardation and multiple congenital anomalies. To our knowledge this is the largest duplication of chromosome 20 that includes segments of both the short and the long arms thus far described in a live-born child.
James V. Neel and Latin America - or how scientific collaboration should be conducted
Authors: Salzano Francisco M.
Published: April 2005

The main events related to the life of James V. Neel, one of the most important geneticists of the last decades, are presented, especially with reference to the influence he exerted in Latin America. Documentation is provided on the field work he performed in Brazil, and on the results of the joint Ann Arbor-Porto Alegre program of research.
Cytogenetics of the neotropical flesh fly Pattonela intermutans (Diptera, Sarcophagidae)
Authors: Parise-Maltempi Patricia Pasquali , Avancini Rita Maria Pereira
Published: April 2005

Pattonella intermutans has 2n = 12 chromosomes including three metacentric and two submetacentric pairs of autosomes and an XX/XY sex chromosome pair. The autosomes are characterized by the presence of a C band in the pericentromeric region while sex chromosomes are totally heterochromatic. The FISH technique showed a nucleolar organizer region (NOR) in autosome IV.
Amplification of a GC-rich heterochromatin in the freshwater fish Leporinus desmotes (Characiformes, Anostomidae)
Authors: Margarido Vladimir Pavan , Galetti Junior Pedro Manoel
Published: April 2005

This is the first description of the karyotype of Leporinus desmotes. The diploid female number was 2n = 54 meta- and submetacentric chromosomes. The nucleolar organizing regions (NORs) were studied by silver nitrate staining and rDNA fluorescence in situ hybridization (FISH) and were found to be located in the telomeric region of the long arm of the 9th pair. C-banding revealed centromeric and telomeric heterochromatin segments in most chromosomes. Intercalar blocks of heterochromatin were observed in the long arm of six chromosome pairs. Besides a NOR-adjacent heterochromatin, all of the intercalar heterochromatic segments were brightly fluorescent by mithramycin staining. These data suggest that a unique amplification of a primordial GC-rich heterochromatin, probably NOR-associated, may have taken place in the karyotype diversification of this Leporinus species.
Cytogenetics of species of the families Pimelodidae and Rhamdiidae (Siluriformes)
Authors: Swarça Ana Cláudia , Caetano Lucia Giuliano , Dias Ana Lúcia
Published: April 2005

Only 33 species among about 300 belonging to the families Pimelodidae and Rhamdiidae have been studied cytogenetically. The diploid number varies from 2n = 46 to 2n = 63 chromosomes, with the karyotypes often being of the meta/submetacentric type. As a result, there is generally a very elevated fundamental number.
A molecular marker distinguishes the subspecies Melipona quadrifasciata quadrifasciata and Melipona quadrifasciata anthidioides (Hymenoptera: Apidae, Meliponinae)
Authors: Waldschmidt Ana M. , Barros Everaldo G. de , Campos Lucio A.O.
Published: April 2005

The stingless bee species Melipona quadrifasciata includes two subspecies, Melipona quadrifasciata anthidioids and Melipona quadrifasciata quadrifasciata. The morphological difference between the two subspecies is the presence of three to five continuous yellow stripes on the terga on the 3rd to 6th segments in workers and males of M. q. quadrifasciata, and two to five interrupted bands in M. q. anthidioides. We identified a DNA marker which is present in M. q. quadrifasciata and absent in M. q. anthidioides. Only one among the M. q. quadrifasciata colonies did not present the marker. It was also absent in bees collected in northern Minas Gerais State (Brazil), despite their morphological resemblance to M. q. quadrifasciata. The marker can be used for studying the genetic structure of the hybridization zone formed by the intercrossing of the two subspecies.
Analysis of the synaptonemal complex of the nine-banded armadillo, Dasypus novemcinctus
Authors: Scavone Márcia Denise da Paixão , Oliveira Claudio , Bagagli Eduardo , Foresti Fausto
Published: April 2005

The synaptonemal complex (SC) of three specimens of the nine-banded armadillo (Dasypus novemcinctus) was analyzed. Thirty-two bivalents (2n = 64) were observed, 31 of them being autosomes and one an XY sexual bivalent. Chromosome synapsis processes and nucleolus structure changes were analyzed in zygotene and pachytene cells, allowing a detailed description of the beginning of meiotic prophase in this species. There was complete synapsis of X and Y chromosomes. Some abnormalities in SC were observed in cells during zygotene and at the beginning of pachytene, but not in cells in the middle and late pachytene, suggesting the occurrence of synaptic adjustments in their SC.
Agronomic, cytogenetic, and isoenzymatic characterizations of oat somaclones
Authors: Augustin Lizete , Federizzi Luiz Carlos , Sereno Maria Jane Cruz de Melo
Published: April 2005

Immature embryo-derived somaclones regenerated from genotypes UPF 12, UPF 89S080 and UFRGS 7 were analyzed for eight agronomic traits and two enzymatic systems in order to evaluate the potential of tissue cultures to induce genetic variability in oats (Avena sativa L.). Some somaclones were also analyzed cytogenetically. Agronomic traits were evaluated in the field for all somaclones in 1993 and 1994. Bi-directional variation (P < 0.05) was detected for all characteristics, and the average frequency of variation observed in 1993 in somaclones from genotypes UPF 12 and UPF 89S080 was 35.2%. Variation observed for agronomic characteristics was heritable through two generations. Isoenzymatic analysis showed variation for both enzymatic systems in four somaclones. In general, the frequency of abnormalities at the cytogenetic level was low. The few that were observed had no effect on the meiotic index. Tissue culture can generate variability in oats in breeding programs.
Caipira sweet orange + Rangpur lime: a somatic hybrid with potential for use as rootstock in the Brazilian citrus industry
Authors: Mendes-da-Glória Fernanda Januzzi , Mourão Filho Francisco de Assis Alves , Camargo Luis Eduardo Aranha , Mendes Beatriz Madalena Januzzi
Published: April 2005

Protoplast culture following polyethylene glycol-induced fusion resulted in the regeneration of somatic hybrid plants between Caipira sweet orange (Citrus sinensis L. Osbeck) and Rangpur lime (C. limonia L. Osbeck). The plants were confirmed as somatic hybrids by leaf morphology, chromosome number and RAPD profile. All regenerated plants were tetraploid (2n = 4x = 36), with intermediate leaf morphology and complementary RAPD banding profile of both parents. This combination may be useful as a rootstock for the citrus industry in Southeastern Brazil since this somatic hybrid could combine the drought tolerance and vigor of Rangpur lime with the blight tolerance of Caipira sweet orange.
Natural cross-pollination in roselle, Hibiscus sabdariffa L. (Malvaceae)
Authors: Vaidya K.R.
Published: April 2005

Two local varieties of roselle (Hibiscus sabdariffa L.), Jamaican Green and Jamaican Red, were grown to determine the amount of natural cross-pollination. Two planting arrangements (alternating rows; alternating individuals in a row) and two planting dates, a month apart, were used for the outcrossing experiments. Stem pigmentation, red (R-) vs. green (rr), was used as a genetic marker in the estimation of outcrossing. Homozygous dominant and recessive genotypes of Jamaican Red and Jamaican Green, respectively, were grown in both of the planting arrangements and dates. Seeds from open-pollinated capsules of randomly selected Jamaican Green plants were planted to score the frequency of cross-pollination. Estimates of natural cross-pollination ranged from 0.20 ± 0.09% to 0.68 ± 0.34%. Roselle outcrosses at a low rate in Jamaica.
Cloning of a chitinase gene from Ewingella americana, a pathogen of the cultivated mushroom, Agaricus bisporus
Authors: Inglis P.W. , Peberdy J.F. , Sockett R.E.
Published: April 2005

We have isolated a gene encoding a chitinase (EC 3.2.1.14) from Ewingella americana, a recently described pathogen of the mushroom Agaricus bisporus. This gene, designated chiA (EMBL/Genbank/DDBJ accession number X90562), was cloned by expression screening of a plasmid-based E. americana HindIII genomic library in Escherichia coli using remazol brilliant violet-stained carboxymethylated chitin incorporated into selective medium. The chiA gene has a 918-bp ORF, terminated by a TAA codon, with a calculated polypeptide size of 33.2 kDa, likely corresponding to a previously purified and characterised 33-kDa endochitinase from E. americana. The deduced amino acid sequence shares 33% identity with chitinase II from Aeromonas sp. No. 10S-24 and 7.8% identity with a chitinase from Saccharopolyspora erythraeus. Homology to other chitinase sequences was otherwise low. The peptide sequence deduced from chiA lacks a typical N-terminal signal sequence and also lacks the chitin binding and type III fibronectin homology units common to many bacterial chitinases. The possibility that this chitinase is not primarily adapted for the environmental mineralisation of pre-formed chitin, but rather for the breakdown of nascent chitin, is discussed in the context of mushroom disease.
Chromosomal investigations in patients with mental retardation and/or congenital malformations
Authors: Santos C.B. , Boy R.T. , Santos J.M. , Silva M.P.S. , Pimentel M.M.G.
Published: April 2005

We investigated the chromosomal constitution of patients with mental retardation and/or congenital malformations in order to determine genetic causes for such disturbances. The GTG and CBG banding patterns were studied using phytohemagglutinin M-stimulated lymphocytes cultured from peripheral blood. Among 98 individuals with mental retardation and/or congenital malformations who were analyzed there were 12 cases of Down's syndrome, two of Edward's syndrome, one of Patau's syndrome, five of Turner's syndrome, two of Klinefelter's syndrome, one of "cri-du-chat" syndrome, one case of a balanced translocation between chromosomes 13 and 14, one case of a derivative chromosome and one of a marker chromosome. We found abnormal chromosomes in 26% of the patients, 82% of which were numerical abnormalities, with the remaining 18% being structural variants. We conclude that patients with mental retardation and/or congenital malformations should be routinely karyotyped.
Glutathione S-transferase M1 (GSTM1) polymorphism in two Brazilian populations
Authors: Hatagima Ana , Klautau-Guimarães Maria Nazaré , Silva Felizardo Penalva da , Cabello Pedro Hernan
Published: April 2005

The distribution of GSTM1 phenotype frequencies was studied in two Brazilian samples composed of healthy and unrelated blood donors of both sexes ranging in age from 18 to 61 years. The first sample consisted of 658 individuals from Rio de Janeiro, and the second included 179 individuals from Brasília. The GSTM1 phenotypes were detected using PCR reactions and subsequent digestion by the restriction enzyme HaeII. The GSTM1 null phenotype frequency was 46% and 49% for Rio de Janeiro and Brasília samples, respectively. The GSTM1 phenotype distributions were not in agreement with Hardy-Weinberg equilibrium in either sample, chi²1 = 11.49 (P < 0.001) for Rio de Janeiro and chi²1 = 6.77 (P < 0.01) for Brasília. This deviation from Hardy-Weinberg equilibrium may be due to factors such as selection, errors in the phenotype determination or incomplete panmixia of the Brazilian population, whose main racial components are Caucasians, Africans and Indians.
Genomic imprinting: genetic mechanisms and phenotypic consequences in Prader-Willi and Angelman syndromes
Authors: Fridman Cintia , Koiffmann Célia P.
Published: April 2005

Chromosomal 15q11-q13 region is of great interest in Human Genetics because many structural rearrangements have been described for it (deletions, duplications and translocations) leading to phenotypes resulting in conditions such as the Prader-Willi (PWS) and Angelman (AS) syndromes which were the first human diseases found to be related to the differential expression of parental alleles (genomic imprinting). Contrary to Mendelian laws where the parental inheritance of genetic information does not influence gene expression, genomic imprinting is characterized by DNA modifications that produce different phenotypes depending on the parental origin of the mutation. Clinical manifestation of PWS appears when the loss of paternally expressed genes occurs and AS results from the loss of a maternally expressed gene. Different genetic mechanisms can lead to PWS or AS, such as deletions, uniparental disomy or imprinting mutation. In AS patients an additional class occurs with mutations on the UBE3A gene. Studies of PWS and AS patients can help us to understand the imprinting process, so that other genomic regions with similar characteristics can be located, and different syndromes can have their genetic mechanisms elucidated.
Survey of Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) biotypes in Brazil using RAPD markers
Authors: Lima L.H.C. , Návia D. , Inglis P.W. , Oliveira M.R.V. de
Published: April 2005

In 1991, the poinsettia strain, silverleaf whitefly or B biotype of Bemisia tabaci was detected in Brazil. This variant is a far more serious agricultural pest than the previously prevalent non-B (BR) biotype. The correct identification of B. tabaci is problematic since it is highly polymorphic with extreme plasticity in key morphological characters that vary according to the host. RAPD-PCR was used to survey the B biotype and other biotypes of B. tabaci in Brazil. Whiteflies were collected from cultivated plants and weeds from 57 different localities and on 27 distinct crops. RAPD analyses using two selected 10-mer primers reliably identified the BR biotype and the B biotype of B. tabaci and also differentiated other whitefly species. The presence of the B biotype was confirmed in 20 Brazilian states. The BR and B biotypes of B. tabaci were found to coexist in the whitefly populations of three different localities: Jaboticabal, SP; Rondonópolis and Cuiabá, MT, and Goiânia, GO.
RAPD analysis of Nectomys squamipes (Rodentia, Sigmodontinae) populations
Authors: Almeida Francisca C. , Moreira Miguel A.M. , Bonvicino Cibele R. , Cerqueira Rui
Published: April 2005

Random amplified of polymorphic DNA (RAPD) analysis was used to assess genetic distance and the genetic structure of populations of Nectomys squamipes, a semiaquatic rodent species distributed along watercourses. DNA samples of five populations were analyzed using three primers, producing 45 scorable bands, 31 of which were polymorphic. There was a significant differentiation among populations [F ST = 0.17; phiST = 0.14 (P < 0.004)] but gene flow (Nm = 1.25) was sufficient to overcome genetic drift effects. No fixed specific markers were found for any population. The Mantel's test and UPGMA cluster analysis showed a lack of relationship between genetic and geographic distances. The apparent homogeneity indicated by RAPD markers coincided with morphometric data, despite the wide geographic range of N. squamipes. Alternative hypotheses for explaining our results include recurrent processes of local extinction and recolonization or a recent and sudden increase in the geographic distribution of this species.
Species diversity and geographic distribution of Gymnotus (Pisces: Gymnotiformes) by nuclear (GGAC)n microsatellite analysis
Authors: Fernandes-Matioli F.M.C. , Matioli S.R. , Almeida-Toledo L.F.
Published: April 2005

Patterns of amplified DNA fragments flanked by (GGAC)n microsatellites, obtained by single primer amplification reaction (SPAR), from 198 Gymnotus specimens (Pisces: Gymnotiformes) sampled from 8 southeastern Brazilian river basins were analyzed. The species studied were Gymnotus carapo, G. pantherinus, G. inaequilabiatus, and G. sylvius. The indirectly obtained patterns reflected the distribution of simple sequence repeats in the nuclear genome of the specimens. Species-specific patterns of DNA amplification were found and were useful for the analysis of the geographic distribution of Gymnotus species. Monomorphic patterns were found in G. carapo, G. pantherinus, and G. inaequilabiatus. Three polymorphic patterns were found in G. sylvius populations. The SPAR technique could be a useful molecular tool in conservation programs involving communities of neotropical freshwater fish.
Characterization of swine stress gene by DNA testing using plucked hair as a source of DNA
Authors: Bastos Reginaldo Gaspar , Federizzi Joreci , Deschamps João Carlos , Cardellino Ricardo , Dellagostin Odir Antônio
Published: April 2005

The swine stress gene (hal) in recessive homozygotes (nn) leads to porcine stress syndrome (PSS), and is associated with pale, soft, exudative pork (PSE). In heterozygosis (Nn) it is linked to poor carcass quality. A total of 179 pigs (86 Large White, 69 Landrace, 12 Duroc and 12 Pietrain) were characterized as normal homozygotes (NN), heterozygotes or recessive homozygotes following amplification of a target region of the hal gene using the polymerase chain reaction (PCR), followed by a restriction endonuclease assay. Plucked hair was used as a source of genomic DNA. The resulting PCR was digested with the restriction enzyme CfoI, followed by agarose gel electrophoresis. Of 179 animals tested, 70% were NN, 28% were Nn, and 2% were nn. The frequency of heterozygotes was higher (P < 0.05) in Landrace (0.43 for Nn) than in Large White pigs (0.09 for Nn). Nine of the 12 Pietrain animals were Nn and three were nn, suggesting a high frequency for the n allele in this breed. These results may be related to the incidence of PSS and PSE in these two breeds, both of which are widely used in breeding programs. The utilization of plucked hair as the source of genomic DNA was a non-invasive and quick method to screen farm animals.
Genetic polymorphism of milk protein loci in Argentinian Holstein cattle
Authors: Bonvillani Adriana Gloria , Di Renzo Miguel Angel , Tiranti Iván Nicolás
Published: April 2005

Some alleles of milk protein loci are associated with superior cheese production characteristics. The genetic polymorphism of the milk protein loci alphas1-casein, beta-casein, k-casein and beta-lactoglobulin was examined in Argentinian Holstein cattle. Samples from 12 herds of four regions of Córdoba were analyzed by starch gel electrophoresis. The chi² test was used to assess whether the populations were in Hardy-Weinberg equilibrium. Genotypic diversity was analyzed by the Shannon-Weaver index. The observed genotypic frequencies were analyzed by Hedrick's genetic identity and the genetic distance of Balakrishnan and Sanghvi. The allelic and genotypic frequencies were similar to those of other Holstein populations. The genotypic frequencies of the alphas1-casein and beta-casein loci were in equilibrium, whereas in some populations the k-casein and beta-lactoglobulin loci were not. According to the Shannon-Weaver index the total genetic diversity within each herd was greater than 96%. The high values of identity agreed with the low genetic distances among populations. We conclude that there is extensive genetic homogeneity in Holstein cattle in Córdoba Province and that it would be feasible to select for B alleles at the k-casein and b-lactoglobulin loci in order to improve the quality of milk available for cheese manufacturing.
Rapid screening for aluminum tolerance in maize (Zea mays L.)
Authors: Giaveno Carlos Daniel , Miranda Filho José B.
Published: April 2005

A significant decrease in maize grain yield due to aluminum toxicity is considered to be one of the most important agricultural problems for tropical regions. Genetic improvement is a useful approach to increase maize yield in acid soils, but this requires a rapid and reliable method to discriminate between genotypes. In our work we investigated the feasibility of using hematoxylin staining (HS) to detect Al-tolerant plants at the seedling stage. The original population along with two populations obtained after one cycle of divergent selection were evaluated by net root growth (NRG) and HS after 7 days in nutrient solution. Results showed a negative correlation between NRG and HS in all populations, in which sensitive plants, characterized by low NRG, exhibited more intense staining than tolerant plants. These results indicate that HS is a useful procedure for selecting Al-tolerant maize seedlings.
Improvement in genetic characteristics and oil yield of selected soybean progenies from octuple crosses
Authors: Hamawaki Osvaldo Toshiyuki , Vello Natal Antônio , Didoné Claudinei Antonio
Published: April 2005

The objective of the present study was to evaluate 44 soybean octuple crosses in the F4:3[8] and F5:3[8] generations in order to select progenies superior for seed oil yield (OY) and other important agronomic characteristics. Octuple crosses were hybridized in a chain mating system. In one group, crosses were carried out for three generations with the adapted x exotic parents until octuple crosses with 75% adapted genes and 25% exotic genes were obtained. In a second group, hybridization of adapted x adapted parents originated crosses with 100% adapted genes. During the growing season 1994/95, the progenies F4:3[8] were evaluated by using the augmented block design. The progenies F5:3[8] were evaluated during the growing season 1995/96 in three experiments using augmented block design without repetition. The octuple crosses gave origin to superior progenies for all the characters studied. In the C22 cross, OY values were 707 kg/ha. The estimates of heritability in relation to the crosses average resulted in the following mean, minimum and maximum values, respectively: number of days to maturity (52.35%, 3.71%, 84.23%); agronomic value (26.69%, 1.62%, 61.28%) and grain yield (29.28%, 1.52%, 61.06%). The observed genetic gains for grain yield in the early, intermediate and late F5:3[8] progenies were superior to the expected genetic gains and the observed genetic gains for OY were more expressive in the early and late F5:[8] progenies. The genetic variability remaining in the selected progenies of some crosses suggests that further genetic gains for grain yield and OY might be possible with advanced selection cycles.
Induction of somatic embryogenesis in soybean: physicochemical factors influencing the development of somatic embryos
Authors: Bonacin Gisele Aparecida , Di Mauro Antonio Orlando , Oliveira Roberto Carlos de , Perecin Dilermando
Published: April 2005

The embryogenic capability of five soybean cultivars (Renascença, IAS-5, IAC-17, BR-16 and FT-Cometa) was studied at different auxin concentrations (8, 10 and 12 mg/l naphthalene acetic acid, NAA), at different pHs (5.8 and 7.0) and at low (8-12 muEm-2 s-1) and high (27-33 mEm-2 s-1) light intensities. The experimental design was completely randomized with four replications. Immature cotyledons 4-6 mm in length were placed in the six induction mediums evaluated and submitted to two light intensities. Twenty immature cotyledons per cultivar were placed on each Petri dish, which was considered to be one replication. The number of somatic embryos per treatment per replication was counted. The results showed genotype influence on somatic embryogenic capability of each cultivar, with the most embryogenic cultivars being BR-16, FT-Cometa and IAS-5. Auxin concentration and pH value also influenced somatic embryo production, with 10 mg/l NAA being the best auxin concentration and 7.0 the best pH value. The interactions cultivar x auxin, auxin x pH and pH x light were significant, while other double interactions were not. All triple and quadruple interactions were significant, except cultivar x pH x light. No significant differences in somatic embryo production were observed in medium with different pHs or when the Petri dishes containing immature cotyledons were exposed to the two light intensities evaluated. However, a higher number of somatic embryos was produced when the medium pH was adjusted to 7.0.
Frequencies of X-ray induced chromosome aberrations in lymphocytes of xeroderma pigmentosum and Fanconi anemia patients estimated by Giemsa and fluorescence in situ hybridization staining techniques
Authors: Saraswathy Radha , Natarajan A.T.
Published: April 2005

Blood lymphocytes from xeroderma pigmentosum (XP) and Fanconi anemia (FA) patients were assessed for their sensitivity to ionizing radiation by estimating the frequency of X-ray (1 and 2 Gy)-induced chromosome aberrations (CA). The frequencies of aberrations in the whole genome were estimated in Giemsa-stained preparations of lymphocytes irradiated at G0 or G2 stages. The frequencies of translocations and dicentrics involving chromosomes 1 and 3 as well as the X-chromosome were determined in slides stained by fluorescence in situ hybridization (FISH) technique. An increase in all types of CA was observed in XP and FA lymphocytes irradiated at G0 when compared to controls. The frequency of dicentrics and rings was 6 to 27% higher (at 1 and 2 Gy) in XP lymphocytes and 37% higher (at 2 Gy) in FA lymphocytes than in controls, while chromosome deletions were higher in irradiated (30% in 1 Gy and 72% in 2 Gy) than in control XP lymphocytes and 28 to 102% higher in FA lymphocytes. In G2-irradiated lymphocytes the frequency of CA was 24 to 55% higher in XP lymphocytes than in controls. In most cases the translocation frequencies were higher than the frequencies of dicentrics (21/19).
Some historical aspects of plant cytogenetics in Argentina and Uruguay
Authors: Hunziker Juan H.
Published: April 2005

A brief account is given of the origin and development of plant cytogenetics in Argentina and Uruguay, along with some of the factors that hampered the development of this area.