bluuebunny/crossref_metadata_2025 huggingface dataset:
Supplementary Figure S5. Quantification of Western blot bands using Image J. from STING Promotes Homeostasis via Regulation of Cell Proliferation and Chromosomal Stability
Authors: Ranoa Diana Rose E. , Widau Ryan C. , Mallon Stephen , Parekh Akash D. , Nicolae Claudia M. , Huang Xiaona , Bolt Michael J. , Arina Ainhoa , Parry Renate , Kron Stephen J. , Moldovan George-Lucian , Khodarev Nikolai N. , Weichselbaum Ralph R.
Published: April 2023

The pixel units obtained for each protein band from Western gels shown in Main Figures 4B (A), 4C (B), 4D (C), and 4E (D) was normalized to the pixel units calculated from their respective b-Actin loading control. For phosphorylated proteins, we then quantified the fraction of phosphorylated proteins to the absolute total amount of protein (total protein + phosphorylated protein). For dose-dependent and stimulation assays, the variables tested were normalized to their respective wild-type unstimulated controls.
Supplementary Figure S1 from Inhibition of NF-κB–Dependent Signaling Enhances Sensitivity and Overcomes Resistance to BET Inhibition in Uveal Melanoma
Authors: Ambrosini Grazia , Do Catherine , Tycko Benjamin , Realubit Ronald B. , Karan Charles , Musi Elgilda , Carvajal Richard D. , Chua Vivian , Aplin Andrew E. , Schwartz Gary K.
Published: April 2023

PLX51107 inhibits the viability of UM cell lines in vitro and in vivo
Supplementary Data 7 from Inhibition of NF-κB–Dependent Signaling Enhances Sensitivity and Overcomes Resistance to BET Inhibition in Uveal Melanoma
Authors: Ambrosini Grazia , Do Catherine , Tycko Benjamin , Realubit Ronald B. , Karan Charles , Musi Elgilda , Carvajal Richard D. , Chua Vivian , Aplin Andrew E. , Schwartz Gary K.
Published: April 2023

The combination PLX51107+PTL induces apoptosis in the BETi-resistant cells. p-p65 expression does not change in liver biopsies of UM patients treated with PLX51107
Table S2 from Spatiotemporal Regulation of ΔNp63 by TGFβ-Regulated miRNAs Is Essential for Cancer Metastasis
Authors: Bui Ngoc H.B. , Napoli Marco , Davis Andrew John , Abbas Hussein A. , Rajapakshe Kimal , Coarfa Cristian , Flores Elsa R.
Published: April 2023

Table S2. Differential expressed microRNAs in MCF10DCIS cells treated with TGFÃŽÂ².
Figure S3 from Spatiotemporal Regulation of ΔNp63 by TGFβ-Regulated miRNAs Is Essential for Cancer Metastasis
Authors: Bui Ngoc H.B. , Napoli Marco , Davis Andrew John , Abbas Hussein A. , Rajapakshe Kimal , Coarfa Cristian , Flores Elsa R.
Published: April 2023

Figure S3. Pathways regulated by Ã¢Ë†â€ Np63-induced and -repressed genes.
Table S2 : GSEA on CGP collection results from Loss of Apc Rapidly Impairs DNA Methylation Programs and Cell Fate Decisions in Lgr5+ Intestinal Stem Cells
Authors: Bruschi Marco , Garnier Laure , Cleroux Elouan , Giordano Alicia , Dumas Michael , Bardet Anaïs F. , Kergrohen Thomas , Quesada Stanislas , Cesses Pierre , Weber Michael , Gerbe François , Jay Philippe
Published: April 2023

This file contains GSEA results from ApcWT- and ApcKO-Lgr5 cells for collections of signatures related to chemical and genetic perturbations.
Supplementary Table 2 from Overexpression of RUNX3 Represses RUNX1 to Drive Transformation of Myelodysplastic Syndrome
Authors: Yokomizo-Nakano Takako , Kubota Sho , Bai Jie , Hamashima Ai , Morii Mariko , Sun Yuqi , Katagiri Seiichiro , Iimori Mihoko , Kanai Akinori , Tanaka Daiki , Oshima Motohiko , Harada Yuka , Ohyashiki Kazuma , Iwama Atsushi , Harada Hironori , Osato Motomi , Sashida Goro
Published: April 2023

RUNX3 IHC and clinical data of MDS patients
Supplementary Data 2 from Overexpression of RUNX3 Represses RUNX1 to Drive Transformation of Myelodysplastic Syndrome
Authors: Yokomizo-Nakano Takako , Kubota Sho , Bai Jie , Hamashima Ai , Morii Mariko , Sun Yuqi , Katagiri Seiichiro , Iimori Mihoko , Kanai Akinori , Tanaka Daiki , Oshima Motohiko , Harada Yuka , Ohyashiki Kazuma , Iwama Atsushi , Harada Hironori , Osato Motomi , Sashida Goro
Published: April 2023

GO analysis of RUNX3-Tet2 KO MDS
Figure S5 from Nicotinamide Phosphoribosyltransferase Acts as a Metabolic Gate for Mobilization of Myeloid-Derived Suppressor Cells
Authors: Travelli Cristina , Consonni Francesca Maria , Sangaletti Sabina , Storto Mariangela , Morlacchi Sara , Grolla Ambra A. , Galli Ubaldina , Tron Gian Cesare , Portararo Paola , Rimassa Lorenza , Pressiani Tiziana , Mazzone Massimiliano , Trovato Rosalinda , Ugel Stefano , Bronte Vincenzo , Tripodo Claudio , Colombo Mario P. , Genazzani Armando A. , Sica Antonio
Published: April 2023

Role of NAMPT in steady-state and emergency myelopoiesis
Figure S1 from Nicotinamide Phosphoribosyltransferase Acts as a Metabolic Gate for Mobilization of Myeloid-Derived Suppressor Cells
Authors: Travelli Cristina , Consonni Francesca Maria , Sangaletti Sabina , Storto Mariangela , Morlacchi Sara , Grolla Ambra A. , Galli Ubaldina , Tron Gian Cesare , Portararo Paola , Rimassa Lorenza , Pressiani Tiziana , Mazzone Massimiliano , Trovato Rosalinda , Ugel Stefano , Bronte Vincenzo , Tripodo Claudio , Colombo Mario P. , Genazzani Armando A. , Sica Antonio
Published: April 2023

NAMPT inhibitors reduce both tumor growth and MDSCs expansion
Supplementary File 1 from Intratumoral Genetic and Functional Heterogeneity in Pediatric Glioblastoma
Authors: Hoffman Mary , Gillmor Aaron H. , Kunz Daniel J. , Johnston Michael J. , Nikolic Ana , Narta Kiran , Zarrei Mehdi , King Jennifer , Ellestad Katrina , Dang Ngoc Ha , Cavalli Florence M.G. , Kushida Michelle M. , Coutinho Fiona J. , Zhu Yuankun , Luu Betty , Ma Yussanne , Mungall Andrew J. , Moore Richard , Marra Marco A. , Taylor Michael D. , Pugh Trevor J. , Dirks Peter B. , Strother Douglas , Lafay-Cousin Lucie , Resnick Adam C. , Scherer Stephen , Senger Donna L. , Simons Benjamin D. , Chan Jennifer A. , Morrissy A. Sorana , Gallo Marco
Published: April 2023

Summary of single nucleotide variants.
Supplementary Table and Figures from Consumption of the Fish Oil High-Fat Diet Uncouples Obesity and Mammary Tumor Growth through Induction of Reactive Oxygen Species in Protumor Macrophages
Authors: Liu Lianliang , Jin Rong , Hao Jiaqing , Zeng Jun , Yin Di , Yi Yanmei , Zhu Mingming , Mandal Anita , Hua Yuan , Ng Chin K. , Egilmez Nejat K. , Sauter Edward R. , Li Bing
Published: April 2023

Tables show realtime PCR primers and compositions of diets. Figures show that n-3 EPA induce pro-tumor macrophage effects in the fish oil HFD-induced obese mouse models.
Supplementary Data from Picosecond Infrared Laser Desorption Mass Spectrometry Identifies Medulloblastoma Subgroups on Intrasurgical Timescales
Authors: Woolman Michael , Kuzan-Fischer Claudia M. , Ferry Isabelle , Kiyota Taira , Luu Betty , Wu Megan , Munoz David G. , Das Sunit , Aman Ahmed , Taylor Michael D. , Rutka James T. , Ginsberg Howard J. , Zarrine-Afsar Arash
Published: April 2023

Table S1. Sampling events, signal strength and signal persistence of data points used to build the MB subgroup model; Table S2. MB subgroup classifying peak list from PCA-LDA modeling;Table S3. PCA-LDA prediction results of the blind MB subgrouping test; Figure S1. The collection geometry of PIRL-MS setup used in this study; Figure S2. Representative PIRL-MS spectra of MB subgroups; Figure S3. The PCA-LDA model of the 4 MB subgroups upon application of non-subjective data exclusion criteria; Figure S4. The 'low complexity' PCA-LDA model of the 4 MB subgroups utilizing only the top 44 MB subgroup distinguishing m/z values; Figure S5. Hematoxylin and Eosin (H&E) staining of the misclassified and unclassifiable data points; Figure S6. PCA-LDA analysis of the misclassified/unclassifiable data points; Figure S7. Liquid Chromatography (LC) elution profiles of laser plume and tissue extract; Figure S8. The envisioned use scenarios for PIRL-MS technology. We have also per request of the reviewers included information on identification of MB classifying molecules with LC-MS, Intrasample variability in correct subgroup assignment as well as Sample collection and handling prior to access for PIRL-MS sampling
Supplemental Table S1 from Spleen Tyrosine Kinase–Mediated Autophagy Is Required for Epithelial–Mesenchymal Plasticity and Metastasis in Breast Cancer
Authors: Shinde Aparna , Hardy Shana D. , Kim Dongwook , Akhand Saeed Salehin , Jolly Mohit Kumar , Wang Wen-Hung , Anderson Joshua C. , Khodadadi Ryan B. , Brown Wells S. , George Jason T. , Liu Sheng , Wan Jun , Levine Herbert , Willey Christopher D. , Krusemark Casey J. , Geahlen Robert L. , Wendt Michael K.
Published: April 2023

This table lists the GO terms associated with the genes identified to be uniquely regulated in TGF-beta induced EMT compared Lapatinib-induced EMT.
Figure S1-S4 from Spleen Tyrosine Kinase–Mediated Autophagy Is Required for Epithelial–Mesenchymal Plasticity and Metastasis in Breast Cancer
Authors: Shinde Aparna , Hardy Shana D. , Kim Dongwook , Akhand Saeed Salehin , Jolly Mohit Kumar , Wang Wen-Hung , Anderson Joshua C. , Khodadadi Ryan B. , Brown Wells S. , George Jason T. , Liu Sheng , Wan Jun , Levine Herbert , Willey Christopher D. , Krusemark Casey J. , Geahlen Robert L. , Wendt Michael K.
Published: April 2023

This file contain supplemental figures S1 through S4. These figures present additional immunoblot and replicate immune fluorescent frames to further support the conclusions made from the data presented in the main manuscript.
Supplementary Data from Retrodifferentiation of Human Tumor Hepatocytes to Stem Cells Leads to Metabolic Reprogramming and Chemoresistance
Authors: Fekir Karim , Dubois-Pot-Schneider Hélène , Désert Romain , Daniel Yoann , Glaise Denise , Rauch Claudine , Morel Fabrice , Fromenty Bernard , Musso Orlando , Cabillic Florian , Corlu Anne
Published: April 2023

Supplemental Table 1 shows the clinical parameters significantly modified in the subpopulations harboring HepaRG-SP or HepaRG-Sphere signature.
Figure S4 from GARP Dampens Cancer Immunity by Sustaining Function and Accumulation of Regulatory T Cells in the Colon
Authors: Salem Mohammad , Wallace Caroline , Velegraki Maria , Li Anqi , Ansa-Addo Ephraim , Metelli Alessandra , Kwon Hyunwoo , Riesenberg Brian , Wu Bill , Zhang Yongliang , Guglietta Silvia , Sun Shaoli , Liu Bei , Li Zihai
Published: April 2023

GARP Deletion Modulates CD103 expression
Supplementary Figures 5 and 6 from An Orally Active Galectin-3 Antagonist Inhibits Lung Adenocarcinoma Growth and Augments Response to PD-L1 Blockade
Authors: Vuong Lynda , Kouverianou Eleni , Rooney Claire M. , McHugh Brian J. , Howie Sarah E.M. , Gregory Christopher D. , Forbes Stuart J. , Henderson Neil C. , Zetterberg Fredrik R. , Nilsson Ulf J. , Leffler Hakon , Ford Paul , Pedersen Anders , Gravelle Lise , Tantawi Susan , Schambye Hans , Sethi Tariq , MacKinnon Alison C.
Published: April 2023

Figure S5 GB1107 impairs M2 macrophage differentiation and LLC1 cell migration and proliferation in vitro. Figure S6 Flow cytometric analysis of LLC tumors from WT or galectin-3-/- mice.
Supplementary Table 1 from The Risk of Ovarian Cancer Increases with an Increase in the Lifetime Number of Ovulatory Cycles: An Analysis from the Ovarian Cancer Cohort Consortium (OC3)
Authors: Trabert Britton , Tworoger Shelley S. , O'Brien Katie M. , Townsend Mary K. , Fortner Renée T. , Iversen Edwin S. , Hartge Patricia , White Emily , Amiano Pilar , Arslan Alan A. , Bernstein Leslie , Brinton Louise A. , Buring Julie E. , Dossus Laure , Fraser Gary E. , Gaudet Mia M. , Giles Graham G. , Gram Inger T. , Harris Holly R. , Bolton Judith Hoffman , Idahl Annika , Jones Michael E. , Kaaks Rudolf , Kirsh Victoria A. , Knutsen Synnove F. , Kvaskoff Marina , Lacey James V. , Lee I-Min , Milne Roger L. , Onland-Moret N. Charlotte , Overvad Kim , Patel Alpa V. , Peters Ulrike , Poynter Jenny N. , Riboli Elio , Robien Kim , Rohan Thomas E. , Sandler Dale P. , Schairer Catherine , Schouten Leo J. , Setiawan Veronica W. , Swerdlow Anthony J. , Travis Ruth C. , Trichopoulou Antonia , van den Brandt Piet A. , Visvanathan Kala , Wilkens Lynne R. , Wolk Alicja , Zeleniuch-Jacquotte Anne , Wentzensen Nicolas
Published: April 2023

Summary of 20 Ovarian Cancer Cohort Consortium (OC3) cohorts included in analysis of lifetime ovulatory cycles (LOC) and incident ovarian cancer.
Supplementary Data from A Prospective Analysis of Circulating Plasma Metabolites Associated with Ovarian Cancer Risk
Authors: Zeleznik Oana A. , Eliassen A. Heather , Kraft Peter , Poole Elizabeth M. , Rosner Bernard A. , Jeanfavre Sarah , Deik Amy A. , Bullock Kevin , Hitchcock Daniel S. , Avila-Pacheco Julian , Clish Clary B. , Tworoger Shelley S.
Published: April 2023

Supplementary data on Study population, Metabolite profiling, and Statistical methods
Supplementary Table 1 from Targeting the E3 Ubiquitin Ligase PJA1 Enhances Tumor-Suppressing TGFβ Signaling
Authors: Chen Jian , Mitra Abhisek , Li Shulin , Song Shumei , Nguyen Bao-Ngoc , Chen Jiun-Sheng , Shin Ji-Hyun , Gough Nancy R. , Lin Paul , Obias Vincent , He Aiwu Ruth , Yao Zhixing , Malta Tathiane M. , Noushmehr Houtan , Latham Patricia S. , Su Xiaoping , Rashid Asif , Mishra Bibhuti , Wu Ray-Chang , Mishra Lopa
Published: April 2023

Upregulated or downregulated genes by PJA1 knockdown and TGF-β1 streatment in HepG2 cells
Supplementary Table 1 from Inhibition of Haspin Kinase Promotes Cell-Intrinsic and Extrinsic Antitumor Activity
Authors: Melms Johannes C. , Vallabhaneni Sreeram , Mills Caitlin E. , Yapp Clarence , Chen Jia-Yun , Morelli Eugenio , Waszyk Patricia , Kumar Sushil , Deming Derrick , Moret Nienke , Rodriguez Steven , Subramanian Kartik , Rogava Meri , Cartwright Adam N.R. , Luoma Adrienne , Mei Shaolin , Brinker Titus J. , Miller David M. , Spektor Alexander , Schadendorf Dirk , Riggi Nicolo , Wucherpfennig Kai W. , Sorger Peter K. , Izar Benjamin
Published: April 2023

Suppl. Table 1: Compounds used in drug screen
Table S5 from Thermal Proteome Profiling Identifies Oxidative-Dependent Inhibition of the Transcription of Major Oncogenes as a New Therapeutic Mechanism for Select Anticancer Compounds
Authors: Peuget Sylvain , Zhu Jiawei , Sanz Gema , Singh Madhurendra , Gaetani Massimiliano , Chen Xinsong , Shi Yao , Saei Amir Ata , Visnes Torkild , Lindström Mikael S. , Rihani Ali , Moyano-Galceran Lidia , Carlson Joseph W. , Hjerpe Elisabet , Joneborg Ulrika , Lehti Kaisa , Hartman Johan , Helleday Thomas , Zubarev Roman , Selivanova Galina
Published: April 2023

Full list of DEGs upon RITA, AF and Onc-1.
Fig Supp 3 from HDAC6 Plays a Noncanonical Role in the Regulation of Antitumor Immune Responses, Dissemination, and Invasiveness of Breast Cancer
Authors: Banik Debarati , Noonepalle Satish , Hadley Melissa , Palmer Erica , Gracia-Hernandez Maria , Zevallos-Delgado Christian , Manhas Namratta , Simonyan Hayk , Young Colin N. , Popratiloff Anastas , Chiappinelli Katherine B. , Fernandes Rohan , Sotomayor Eduardo M. , Villagra Alejandro
Published: April 2023

Fig Supp 3
Supplementary Information from An Integrative Gene Expression and Mathematical Flux Balance Analysis Identifies Targetable Redox Vulnerabilities in Melanoma Cells
Authors: Paudel B. Bishal , Lewis Joshua E. , Hardeman Keisha N. , Hayford Corey E. , Robbins Charles J. , Stauffer Philip E. , Codreanu Simona G. , Sherrod Stacy D. , McLean John A. , Kemp Melissa L. , Quaranta Vito
Published: April 2023

Supplementary Information, Methods, Tables
Figure S6 from Dual Oxidase-Induced Sustained Generation of Hydrogen Peroxide Contributes to Pharmacologic Ascorbate-Induced Cytotoxicity
Authors: Gibson Adrienne R. , O'Leary Brianne R. , Du Juan , Sarsour Ehab H. , Kalen Amanda L. , Wagner Brett A. , Stolwijk Jeffrey M. , Falls-Hubert Kelly C. , Alexander Matthew S. , Carroll Rory S. , Spitz Douglas R. , Buettner Garry R. , Goswami Prabhat C. , Cullen Joseph J.
Published: April 2023

DUOX1 expression is increased in normal pancreas compared to PDAC samples.
Figure S3 from Dual Oxidase-Induced Sustained Generation of Hydrogen Peroxide Contributes to Pharmacologic Ascorbate-Induced Cytotoxicity
Authors: Gibson Adrienne R. , O'Leary Brianne R. , Du Juan , Sarsour Ehab H. , Kalen Amanda L. , Wagner Brett A. , Stolwijk Jeffrey M. , Falls-Hubert Kelly C. , Alexander Matthew S. , Carroll Rory S. , Spitz Douglas R. , Buettner Garry R. , Goswami Prabhat C. , Cullen Joseph J.
Published: April 2023

No changes in NOX enzymes are observed following P-AscH-.
Supplementary Table S1 from NOX4 Inhibition Potentiates Immunotherapy by Overcoming Cancer-Associated Fibroblast-Mediated CD8 T-cell Exclusion from Tumors
Authors: Ford Kirsty , Hanley Christopher J. , Mellone Massimiliano , Szyndralewiez Cedric , Heitz Freddy , Wiesel Philippe , Wood Oliver , Machado Maria , Lopez Maria-Antoinette , Ganesan Anusha-Preethi , Wang Chuan , Chakravarthy Ankur , Fenton Tim R. , King Emma V. , Vijayanand Pandurangan , Ottensmeier Christian H. , Al-Shamkhani Aymen , Savelyeva Natalia , Thomas Gareth J.
Published: April 2023

Supplementary Table S1
Supplementary Table S1 from Telomere Maintenance Mechanisms Define Clinical Outcome in High-Risk Neuroblastoma
Authors: Koneru Balakrishna , Lopez Gonzalo , Farooqi Ahsan , Conkrite Karina L. , Nguyen Thinh H. , Macha Shawn J. , Modi Apexa , Rokita Jo Lynne , Urias Eduardo , Hindle Ashly , Davidson Heather , Mccoy Kristyn , Nance Jonas , Yazdani Vanda , Irwin Meredith S. , Yang Shengping , Wheeler David A. , Maris John M. , Diskin Sharon J. , Reynolds C. Patrick
Published: April 2023

Supplementary Table S1
Supplementary Data from Telomere Maintenance Mechanisms Define Clinical Outcome in High-Risk Neuroblastoma
Authors: Koneru Balakrishna , Lopez Gonzalo , Farooqi Ahsan , Conkrite Karina L. , Nguyen Thinh H. , Macha Shawn J. , Modi Apexa , Rokita Jo Lynne , Urias Eduardo , Hindle Ashly , Davidson Heather , Mccoy Kristyn , Nance Jonas , Yazdani Vanda , Irwin Meredith S. , Yang Shengping , Wheeler David A. , Maris John M. , Diskin Sharon J. , Reynolds C. Patrick
Published: April 2023

Supplementary Data
Supplementary Figure S5. from Genome-Wide CRISPR-Cas9 Screen Reveals Selective Vulnerability of ATRX-Mutant Cancers to WEE1 Inhibition
Authors: Liang Junbo , Zhao Hong , Diplas Bill H. , Liu Song , Liu Jianmei , Wang Dingding , Lu Yan , Zhu Qing , Wu Jiayu , Wang Wenjia , Yan Hai , Zeng Yi-Xin , Wang Xiaoyue , Jiao Yuchen
Published: April 2023

Western blots displaying the effects of ATRX knockdown in PLC/PRF/5 and HeLa cells.
Supplementary Figure S7 from Murine Oviductal High-Grade Serous Carcinomas Mirror the Genomic Alterations, Gene Expression Profiles, and Immune Microenvironment of Their Human Counterparts
Authors: McCool Kevin W. , Freeman Zachary T. , Zhai Yali , Wu Rong , Hu Kevin , Liu Chia-Jen , Tomlins Scott A. , Fearon Eric R. , Magnuson Brian , Kuick Rork , Cho Kathleen R.
Published: April 2023

Figure S7 shows correlation matrix analysis showing which immune cell types are most associated with one another in human and mouse HGSCs.
Supplementary Figure S3 from Genome-Wide CRISPR-Cas9 Screen Reveals Selective Vulnerability of ATRX-Mutant Cancers to WEE1 Inhibition
Authors: Liang Junbo , Zhao Hong , Diplas Bill H. , Liu Song , Liu Jianmei , Wang Dingding , Lu Yan , Zhu Qing , Wu Jiayu , Wang Wenjia , Yan Hai , Zeng Yi-Xin , Wang Xiaoyue , Jiao Yuchen
Published: April 2023

Supplementary Figure S3. Validation of ATRX synthetic lethal candidates by RNAi.
Supplementary Figure S5 from Murine Oviductal High-Grade Serous Carcinomas Mirror the Genomic Alterations, Gene Expression Profiles, and Immune Microenvironment of Their Human Counterparts
Authors: McCool Kevin W. , Freeman Zachary T. , Zhai Yali , Wu Rong , Hu Kevin , Liu Chia-Jen , Tomlins Scott A. , Fearon Eric R. , Magnuson Brian , Kuick Rork , Cho Kathleen R.
Published: April 2023

Figure S5 shows comparison of gene expression in human serous and endometrioid ovarian carcinomas to corresponding mouse tumors
Supplementary Figure S4 from Murine Oviductal High-Grade Serous Carcinomas Mirror the Genomic Alterations, Gene Expression Profiles, and Immune Microenvironment of Their Human Counterparts
Authors: McCool Kevin W. , Freeman Zachary T. , Zhai Yali , Wu Rong , Hu Kevin , Liu Chia-Jen , Tomlins Scott A. , Fearon Eric R. , Magnuson Brian , Kuick Rork , Cho Kathleen R.
Published: April 2023

Figure S4 shows correlation of RNA expression in human and mouse HGSCs using a subset of genes
Supplementary Figure S3 from Murine Oviductal High-Grade Serous Carcinomas Mirror the Genomic Alterations, Gene Expression Profiles, and Immune Microenvironment of Their Human Counterparts
Authors: McCool Kevin W. , Freeman Zachary T. , Zhai Yali , Wu Rong , Hu Kevin , Liu Chia-Jen , Tomlins Scott A. , Fearon Eric R. , Magnuson Brian , Kuick Rork , Cho Kathleen R.
Published: April 2023

Figure S3 shows mouse RNA-seq data from normal ovaries, oviducts, and mouse tumors
Supplementary Figure S2 from Murine Oviductal High-Grade Serous Carcinomas Mirror the Genomic Alterations, Gene Expression Profiles, and Immune Microenvironment of Their Human Counterparts
Authors: McCool Kevin W. , Freeman Zachary T. , Zhai Yali , Wu Rong , Hu Kevin , Liu Chia-Jen , Tomlins Scott A. , Fearon Eric R. , Magnuson Brian , Kuick Rork , Cho Kathleen R.
Published: April 2023

Figure S2 shows Sanger sequencing confirmation of somatic mutations in BPRN tumors
Supplementary Figure S1 from Murine Oviductal High-Grade Serous Carcinomas Mirror the Genomic Alterations, Gene Expression Profiles, and Immune Microenvironment of Their Human Counterparts
Authors: McCool Kevin W. , Freeman Zachary T. , Zhai Yali , Wu Rong , Hu Kevin , Liu Chia-Jen , Tomlins Scott A. , Fearon Eric R. , Magnuson Brian , Kuick Rork , Cho Kathleen R.
Published: April 2023

Figure S1 shows Kaplan-Meier plots for 3 groups of mice
Figure S1 from Circulating Immune Cell Composition and Cancer Risk: A Prospective Study Using Epigenetic Cell Count Measures
Authors: Le Cornet Charlotte , Schildknecht Konstantin , Rossello Chornet Araceli , Fortner Renée T. , González Maldonado Sandra , Katzke Verena A. , Kühn Tilman , Johnson Theron , Olek Sven , Kaaks Rudolf
Published: April 2023

Supplementary Figure S1. Stacked bar charts of normalized immune cell counts across strata of baseline characteristics in the sub-cohort (n = 465).
Cooperative blockade of PKCα and JAK2 drives apoptosis in glioblastoma from Cooperative Blockade of PKCα and JAK2 Drives Apoptosis in Glioblastoma
Authors: Wong Robyn A. , Luo Xujun , Lu Mimi , An Zhenyi , Haas-Kogan Daphne A. , Phillips Joanna J. , Shokat Kevan M. , Weiss William A. , Fan Qi Wen
Published: April 2023

Supplementary Figure S1. PP242 induced apoptosis through a mitochondrial-dependent pathway. Supplementary Figure S2. PP242 showed potent blockade of p-MARCKS, but not p-STAT3Y705 in GBM6 cells. Supplementary Figure S3. Effects of PKC, JAK2, and mTOR inhibitors on cell proliferation and apoptosis. Supplementary Figure S4. Cooperative blockade of PKCα and JAK2 drives apoptosis. Supplementary Figure S5. Efficacy and tolerability of combination therapy in mice.
Figure S6 from Cancer Cell–Derived Matrisome Proteins Promote Metastasis in Pancreatic Ductal Adenocarcinoma
Authors: Tian Chenxi , Öhlund Daniel , Rickelt Steffen , Lidström Tommy , Huang Ying , Hao Liangliang , Zhao Renee T. , Franklin Oskar , Bhatia Sangeeta N. , Tuveson David A. , Hynes Richard O.
Published: April 2023

Epithelial SERPINB5 staining is not prognostic.
Figure S1 from Cancer Cell–Derived Matrisome Proteins Promote Metastasis in Pancreatic Ductal Adenocarcinoma
Authors: Tian Chenxi , Öhlund Daniel , Rickelt Steffen , Lidström Tommy , Huang Ying , Hao Liangliang , Zhao Renee T. , Franklin Oskar , Bhatia Sangeeta N. , Tuveson David A. , Hynes Richard O.
Published: April 2023

AGRN, SERPINB5, and CSTB gene expression in a panel of PDAC cell lines.
Figure S6 from The PET-Tracer 89Zr-Df-IAB22M2C Enables Monitoring of Intratumoral CD8 T-cell Infiltrates in Tumor-Bearing Humanized Mice after T-cell Bispecific Antibody Treatment
Authors: Griessinger Christoph M. , Olafsen Tove , Mascioni Alessandro , Jiang Ziyue Karen , Zamilpa Charles , Jia Fang , Torgov Michael , Romero Jason M. , Marchioni Filippo , Satpayev Daulet , Lee Chenyu , Zhang Green , Nayak Tapan K. , Pincha Mudita , Amann Maria , Mohan Preethi L.B. , Richard Marine , Nicolini Valeria G. , Sam Johannes , Claus Christina , Ferrara Claudia , Brünker Peter , Bacac Marina , Umana Pablo , Rüttinger Dominik , Wilson Ian A. , Gudas Jean , Klein Christian , Tessier Jean J.L.
Published: April 2023

Figure S6 shows the correlation of CD8-IHC and tumoruptake as determined by gamma-counting or PET.
Figure S1 from PET Reporter Gene Imaging and Ganciclovir-Mediated Ablation of Chimeric Antigen Receptor T Cells in Solid Tumors
Authors: Murty Surya , Labanieh Louai , Murty Tara , Gowrishankar Gayatri , Haywood Tom , Alam Israt S. , Beinat Corinne , Robinson Elise , Aalipour Amin , Klysz Dorota D. , Cochran Jennifer R. , Majzner Robbie G. , Mackall Crystal L. , Gambhir Sanjiv S.
Published: April 2023

Figure S1 shows Surface B7H3 CAR, PD-1, and LAG-3 expression of T-cells transduced with CAR retroviral supernatant
FiguresS1-S8 from FIP200 Suppresses Immune Checkpoint Therapy Responses in Breast Cancers by Limiting AZI2/TBK1/IRF Signaling Independent of Its Canonical Autophagy Function
Authors: Okamoto Takako , Yeo Syn Kok , Hao Mingang , Copley Mary Rose , Haas Michael A. , Chen Song , Guan Jun-Lin
Published: April 2023

Figures S1 to S8
Supplementary methods from Runx2 Deficiency in Osteoblasts Promotes Myeloma Progression by Altering the Bone Microenvironment at New Bone Sites
Authors: Xu Xiaoxuan , Zhang Chao , Trotter Timothy N. , Gowda Pramod S. , Lu Yun , Ponnazhagan Selvarangan , Javed Amjad , Li Juan , Yang Yang
Published: April 2023

The Supplementary Methods provide more detailed information on OB-Runx2 mouse model and in vivo/ in vitro experiments.
Supplementary Table S1 from Runx2 Deficiency in Osteoblasts Promotes Myeloma Progression by Altering the Bone Microenvironment at New Bone Sites
Authors: Xu Xiaoxuan , Zhang Chao , Trotter Timothy N. , Gowda Pramod S. , Lu Yun , Ponnazhagan Selvarangan , Javed Amjad , Li Juan , Yang Yang
Published: April 2023

The Supplementary Table S1 provides the information about all the antibodies used in flow cytometry analysis and immunostaining in this study.
Figure S3 from Normal Breast-Derived Epithelial Cells with Luminal and Intrinsic Subtype-Enriched Gene Expression Document Interindividual Differences in Their Differentiation Cascade
Authors: Kumar Brijesh , Prasad Mayuri , Bhat-Nakshatri Poornima , Anjanappa Manjushree , Kalra Maitri , Marino Natascia , Storniolo Anna Maria , Rao Xi , Liu Sheng , Wan Jun , Liu Yunlong , Nakshatri Harikrishna
Published: April 2023

ALDEFLUOR and AXL staining pattern of various cell lines
Supplementary Figures from Runx2 Deficiency in Osteoblasts Promotes Myeloma Progression by Altering the Bone Microenvironment at New Bone Sites
Authors: Xu Xiaoxuan , Zhang Chao , Trotter Timothy N. , Gowda Pramod S. , Lu Yun , Ponnazhagan Selvarangan , Javed Amjad , Li Juan , Yang Yang
Published: April 2023

The Supplementary Figures show the characterization of OB-Runx2 mouse model and the results of analysis of BM immunity after depletion of MDSCs by 5-FU.
Figure S1 from Normal Breast-Derived Epithelial Cells with Luminal and Intrinsic Subtype-Enriched Gene Expression Document Interindividual Differences in Their Differentiation Cascade
Authors: Kumar Brijesh , Prasad Mayuri , Bhat-Nakshatri Poornima , Anjanappa Manjushree , Kalra Maitri , Marino Natascia , Storniolo Anna Maria , Rao Xi , Liu Sheng , Wan Jun , Liu Yunlong , Nakshatri Harikrishna
Published: April 2023

Characterization of KTB cells before and after immortalization
Supplementary Figure Legend from Obesity/Type 2 Diabetes-Associated Liver Tumors Are Sensitive to Cyclin D1 Deficiency
Authors: Luo Chi , Liang Jiaxin , Sharabi Kfir , Hatting Maximilian , Perry Elizabeth A. , Tavares Clint D.J. , Goyal Lipika , Srivastava Amitabh , Bilodeau Marc , Zhu Andrew X. , Sicinski Piotr , Puigserver Pere
Published: April 2023

Supplementary figure legends
Table S1 from A Genetic Vaccine Encoding Shared Cancer Neoantigens to Treat Tumors with Microsatellite Instability
Authors: Leoni Guido , D'Alise Anna Morena , Cotugno Gabriella , Langone Francesca , Garzia Irene , De Lucia Maria , Fichera Imma , Vitale Rosa , Bignone Veronica , Tucci Fabio Giovanni , Mori Federica , Leuzzi Adriano , Di Matteo Elena , Troise Fulvia , Abbate Adele , Merone Rossella , Ruzza Valentino , Diodoro Maria Grazia , Yadav Mahesh , Gordon-Alonso Monica , Vanhaver Cristophe , Panigada Maddalena , Soprana Elisa , Siccardi Antonio , Folgori Antonella , Colloca Stefano , van der Bruggen Pierre , Nicosia Alfredo , Lahm Armin , Catanese Maria Teresa , Scarselli Elisa
Published: April 2023

List of 1087 FSPs suitable for the inclusion in NOUS-209 vaccine.
Supplementary Data from The Synthetic Small Molecule FL3 Combats Intestinal Tumorigenesis via Axin1-Mediated Inhibition of Wnt/β-Catenin Signaling
Authors: Jackson Dakota N. , Alula Kibrom M. , Delgado-Deida Yaritza , Tabti Redouane , Turner Kevin , Wang Xuan , Venuprasad K. , Souza Rhonda F. , Désaubry Laurent , Theiss Arianne L.
Published: April 2023

Supplemental methods
Supplementary Data from The Synthetic Small Molecule FL3 Combats Intestinal Tumorigenesis via Axin1-Mediated Inhibition of Wnt/β-Catenin Signaling
Authors: Jackson Dakota N. , Alula Kibrom M. , Delgado-Deida Yaritza , Tabti Redouane , Turner Kevin , Wang Xuan , Venuprasad K. , Souza Rhonda F. , Désaubry Laurent , Theiss Arianne L.
Published: April 2023

FL3 does not alter cell proliferation
FigS2 from Single-Cell Transcriptomic Heterogeneity in Invasive Ductal and Lobular Breast Cancer Cells
Authors: Chen Fangyuan , Ding Kai , Priedigkeit Nolan , Elangovan Ashuvinee , Levine Kevin M. , Carleton Neil , Savariau Laura , Atkinson Jennifer M. , Oesterreich Steffi , Lee Adrian V.
Published: April 2023

FigS2
Supplementary Methods from LncRNA HIF1A-AS1 Promotes Gemcitabine Resistance of Pancreatic Cancer by Enhancing Glycolysis through Modulating the AKT/YB1/HIF1α Pathway
Authors: Xu Fengyu , Huang Mengqi , Chen Qingyong , Niu Yi , Hu Yuhang , Hu Ping , Chen Ding , He Chi , Huang Kang , Zeng Zhu , Tang Jiang , Wang Fan , Zhao Yong , Wang Chunyou , Zhao Gang
Published: April 2023

Supplementary Methods
Table S3 from Tumor-Derived Pericytes Driven by EGFR Mutations Govern the Vascular and Immune Microenvironment of Gliomas
Authors: Segura-Collar Berta , Garranzo-Asensio María , Herranz Beatriz , Hernández-SanMiguel Esther , Cejalvo Teresa , Casas Bárbara S. , Matheu Ander , Pérez-Núñez Ángel , Sepúlveda-Sánchez Juan Manuel , Hernández-Laín Aurelio , Palma Verónica , Gargini Ricardo , Sánchez-Gómez Pilar
Published: April 2023

Antibodies
Table S1 from Tumor-Derived Pericytes Driven by EGFR Mutations Govern the Vascular and Immune Microenvironment of Gliomas
Authors: Segura-Collar Berta , Garranzo-Asensio María , Herranz Beatriz , Hernández-SanMiguel Esther , Cejalvo Teresa , Casas Bárbara S. , Matheu Ander , Pérez-Núñez Ángel , Sepúlveda-Sánchez Juan Manuel , Hernández-Laín Aurelio , Palma Verónica , Gargini Ricardo , Sánchez-Gómez Pilar
Published: April 2023

List of GBM cell lines
Supplementary Data from Cooperative Targeting of Immunotherapy-Resistant Melanoma and Lung Cancer by an AXL-Targeting Antibody–Drug Conjugate and Immune Checkpoint Blockade
Authors: Boshuizen Julia , Pencheva Nora , Krijgsman Oscar , Altimari Daniela D'Empaire , Castro Patricia Garrido , de Bruijn Beaunelle , Ligtenberg Maarten A. , Gresnigt-Van den Heuvel Elke , Vredevoogd David W. , Song Ji-Ying , Visser Nils , Apriamashvili Georgi , Janmaat Maarten L. , Plantinga Theo S. , Franken Patrick , Houtkamp Mischa , Lingnau Andreas , Jure-Kunkel Maria , Peeper Daniel S.
Published: April 2023

Supplementary Table 2 Differentially expressed proteins, comparing EnaV-treated tumors to control tumors
Supplementary Material from Loss-of-Function Variants in the Tumor-Suppressor Gene PTPN14 Confer Increased Cancer Risk
Authors: Olafsdottir Thorhildur , Stacey Simon N. , Sveinbjornsson Gardar , Thorleifsson Gudmar , Norland Kristjan , Sigurgeirsson Bardur , Thorisdottir Kristin , Kristjansson Arni Kjalar , Tryggvadottir Laufey , Sarin Kavita Y. , Benediktsson Rafn , Jonasson Jon G. , Sigurdsson Asgeir , Jonasdottir Aslaug , Kristmundsdottir Snaedis , Jonsson Hakon , Gylfason Arnaldur , Oddsson Asmundur , Fridriksdottir Run , Gudjonsson Sigurjon A. , Zink Florian , Lund Sigrun H. , Rognvaldsson Solvi , Melsted Pall , Steinthorsdottir Valgerdur , Gudmundsson Julius , Mikaelsdottir Evgenia , Olason Pall I. , Stefansdottir Lilja , Eggertsson Hannes P. , Halldorsson Bjarni V. , Thorsteinsdottir Unnur , Agustsson Tomas T. , Olafsson Karl , Olafsson Jon H. , Sulem Patrick , Rafnar Thorunn , Gudbjartsson Daniel F. , Stefansson Kari
Published: April 2023

Supplementary Methods, Supplementary Tables 1-18 and Supplementary Figures 1-5.
Figure S3 from Tumor-Derived Pericytes Driven by EGFR Mutations Govern the Vascular and Immune Microenvironment of Gliomas
Authors: Segura-Collar Berta , Garranzo-Asensio María , Herranz Beatriz , Hernández-SanMiguel Esther , Cejalvo Teresa , Casas Bárbara S. , Matheu Ander , Pérez-Núñez Ángel , Sepúlveda-Sánchez Juan Manuel , Hernández-Laín Aurelio , Palma Verónica , Gargini Ricardo , Sánchez-Gómez Pilar
Published: April 2023

Characterization of the murine glioma models: SVZ EGFR wt/amp and SVZ EGFR vIII.
Supplementary Data from Diabetes Risk Reduction Diet and Survival after Breast Cancer Diagnosis
Authors: Wang Tengteng , Farvid Maryam S. , Kang Jae H. , Holmes Michelle D. , Rosner Bernard A. , Tamimi Rulla M. , Willett Walter C. , Eliassen A. Heather
Published: April 2023

Supplementary Table 1 and 2
Supplementary Table 1 from Cancer-Associated Fibroblasts in Pancreatic Ductal Adenocarcinoma Determine Response to SLC7A11 Inhibition
Authors: Sharbeen George , McCarroll Joshua A. , Akerman Anouschka , Kopecky Chantal , Youkhana Janet , Kokkinos John , Holst Jeff , Boyer Cyrille , Erkan Mert , Goldstein David , Timpson Paul , Cox Thomas R. , Pereira Brooke A. , Chitty Jessica L. , Fey Sigrid K. , Najumudeen Arafath K. , Campbell Andrew D. , Sansom Owen J. , Ignacio Rosa Mistica C. , Naim Stephanie , Liu Jie , Russia Nelson , Lee Julia , Chou Angela , Johns Amber , Gill Anthony J. , Gonzales-Aloy Estrella , Gebski Val , Guan Yi Fang , Pajic Marina , Turner Nigel , Apte Minoti V. , Davis Thomas P. , Morton Jennifer P. , Haghighi Koroush S. , Kasparian Jorjina , McLean Benjamin J. , Setargew Yordanos F. , Phillips Phoebe A.
Published: April 2023

List of antibodies
Supplementary Figure S4 from E2A Modulates Stemness, Metastasis, and Therapeutic Resistance of Breast Cancer
Authors: López-Menéndez Celia , Vázquez-Naharro Alberto , Santos Vanesa , Dubus Pierre , Santamaría Patricia G. , Martínez-Ramírez Ángel , Portillo Francisco , Moreno-Bueno Gema , Faraldo Marisa M. , Cano Amparo
Published: April 2023

Figure S4 and legends
Table S8 from Fusobacterium Nucleatum Promotes the Development of Colorectal Cancer by Activating a Cytochrome P450/Epoxyoctadecenoic Acid Axis via TLR4/Keap1/NRF2 Signaling
Authors: Kong Cheng , Yan Xuebing , Zhu Yefei , Zhu Huiyuan , Luo Ying , Liu Peipei , Ferrandon Sylvain , Kalady Matthew F. , Gao Renyuan , He Jide , Yin Fang , Qu Xiao , Zheng Jiayi , Gao Yaohui , Wei Qing , Ma Yanlei , Liu Jun-Yan , Qin Huanlong
Published: April 2023

Table S8 shows the binding sequence of NRF2 (NFE2L2) in the promoter region of CYP2J2.
Figure S5 from Multilevel Regulation of β-Catenin Activity by SETD2 Suppresses the Transition from Polycystic Kidney Disease to Clear Cell Renal Cell Carcinoma
Authors: Rao Hanyu , Li Xiaoxue , Liu Min , Liu Jing , Feng Wenxin , Tang Huayuan , Xu Jin , Gao Wei-Qiang , Li Li
Published: April 2023

SETD2 is highly relevant to hyperactive Wnt/β-catenin signaling in ccRCC clinical samples.
Supplementary Figure S4 from α1-Acid Glycoprotein Enhances the Immunosuppressive and Protumor Functions of Tumor-Associated Macrophages
Authors: Matsusaka Kotaro , Fujiwara Yukio , Pan Cheng , Esumi Shigeyuki , Saito Yoichi , Bi Jing , Nakamura Yuka , Mukunoki Ayumi , Takeo Toru , Nakagata Naomi , Yoshii Daiki , Fukuda Ryo , Nagasaki Taisei , Tanaka Ryusei , Komori Hisakazu , Maeda Hitoshi , Watanabe Hiroshi , Tamada Koji , Komohara Yoshihiro , Maruyama Toru
Published: April 2023

Effects of AGP-treated macrophage-conditioned medium on STAT3 activation in tumor cells. Several tumor cells were incubated with AGP-MCM for the indicated times, followed by the determination of p-STAT3, STAT3, and β-actin expression by western blot analysis.
Supplementary Movie Description from Loss-of-Function Mutations in TRAF7 and KLF4 Cooperatively Activate RAS-Like GTPase Signaling and Promote Meningioma Development
Authors: Najm Paul , Zhao Peihua , Steklov Mikhail , Sewduth Raj Nayan , Baietti Maria Francesca , Pandolfi Silvia , Criem Nathan , Lechat Benoit , Maia Teresa Mendes , Van Haver Delphi , Corthout Nikky , Eyckerman Sven , Impens Francis , Sablina Anna A.
Published: April 2023

Supplementary Movie Description
Supplementary Data from Suppression of Endothelial Cell FAK Expression Reduces Pancreatic Ductal Adenocarcinoma Metastasis after Gemcitabine Treatment
Authors: Roy-Luzarraga Marina , Reynolds Louise E. , de Luxán-Delgado Beatriz , Maiques Oscar , Wisniewski Laura , Newport Emma , Rajeeve Vinothini , Drake Rebecca J.G. , Gómez-Escudero Jesús , Richards Frances M. , Weller Céline , Dormann Christof , Meng Ya-Ming , Vermeulen Peter B. , Saur Dieter , Sanz-Moreno Victoria , Wong Ping-Pui , Géraud Cyrill , Cutillas Pedro R. , Hodivala-Dilke Kairbaan
Published: April 2023

Supplementary Data from Suppression of Endothelial Cell FAK Expression Reduces Pancreatic Ductal Adenocarcinoma Metastasis after Gemcitabine Treatment
Supplementary Materials and Methods from Estrogen Receptor β-Mediated Inhibition of Actin-Based Cell Migration Suppresses Metastasis of Inflammatory Breast Cancer
Authors: Thomas Christoforos , Karagounis Ilias V. , Srivastava Ratnesh K. , Vrettos Nicholas , Nikolos Fotis , Francois Noëlle , Huang Menggui , Gong Siliang , Long Qi , Kumar Sushil , Koumenis Constantinos , Krishnamurthy Savitri , Ueno Naoto T. , Chakrabarti Rumela , Maity Amit
Published: April 2023

Contains supplementary methods
Supplementary Table 3 from E2F1 and E2F2-Mediated Repression of CPT2 Establishes a Lipid-Rich Tumor-Promoting Environment
Authors: González-Romero Francisco , Mestre Daniela , Aurrekoetxea Igor , O'Rourke Colm J. , Andersen Jesper B. , Woodhoo Ashwin , Tamayo-Caro Miguel , Varela-Rey Marta , Palomo-Irigoyen Marta , Gómez-Santos Beatriz , de Urturi Diego Sáenz , Núñez-García Maitane , García-Rodríguez Juan L. , Fernández-Ares Larraitz , Buqué Xabier , Iglesias-Ara Ainhoa , Bernales Irantzu , De Juan Virginia Gutierrez , Delgado Teresa C. , Goikoetxea-Usandizaga Naroa , Lee Richard , Bhanot Sanjay , Delgado Igotz , Perugorria Maria J. , Errazti Gaizka , Mosteiro Lorena , Gaztambide Sonia , Martinez de la Piscina Idoia , Iruzubieta Paula , Crespo Javier , Banales Jesus M. , Martínez-Chantar Maria L. , Castaño Luis , Zubiaga Ana M. , Aspichueta Patricia
Published: April 2023

Supplementary table 3
Supplementary Table S3 from Supraphysiologic Testosterone Induces Ferroptosis and Activates Immune Pathways through Nucleophagy in Prostate Cancer
Authors: Kumar Rajendra , Mendonca Janet , Owoyemi Olutosin , Boyapati Kavya , Thomas Naiju , Kanacharoen Suthicha , Coffey Max , Topiwala Deven , Gomes Carolina , Ozbek Busra , Jones Tracy , Rosen Marc , Dong Liang , Wiens Sadie , Brennen W. Nathaniel , Isaacs John T. , De Marzo Angelo M. , Markowski Mark C. , Antonarakis Emmanuel S. , Qian David Z. , Pienta Kenneth J. , Pardoll Drew M. , Carducci Michael A. , Denmeade Samuel R. , Kachhap Sushant K.
Published: April 2023

DNA repair gene mutation analysis
Supplementary Data from N6-Methyladenosine Regulates mRNA Stability and Translation Efficiency of KRT7 to Promote Breast Cancer Lung Metastasis
Authors: Chen Feng , Chen Zhuojia , Guan Tao , Zhou Yan , Ge Lichen , Zhang Haisheng , Wu Yingmin , Jiang Guan-Min , He Weiling , Li Jiexin , Wang Hongsheng
Published: April 2023

Table S3
Supplementary Data from Nanoparticle Delivery of miR-122 Inhibits Colorectal Cancer Liver Metastasis
Authors: Sendi Hossein , Yazdimamaghani Mostafa , Hu Mengying , Sultanpuram Nikhila , Wang Jie , Moody Amber S. , McCabe Ellie , Zhang Jiajie , Graboski Amanda , Li Liantao , Rojas Juan D. , Dayton Paul A. , Huang Leaf , Wang Andrew Z.
Published: April 2023

Supplementary info
Supplementary Table from Functional Analysis of MET Exon 14 Skipping Alteration in Cancer Invasion and Metastatic Dissemination
Authors: Wang Feng , Liu Yang , Qiu Wanglong , Shum Elaine , Feng Monica , Zhao Dejian , Zheng Deyou , Borczuk Alain , Cheng Haiying , Halmos Balazs
Published: April 2023

Supplementary Table from Functional Analysis of MET Exon 14 Skipping Alteration in Cancer Invasion and Metastatic Dissemination
Supplementary Figure from Genetic Risk of Second Primary Cancer in Breast Cancer Survivors: The Multiethnic Cohort Study
Authors: Chen Fei , Park Sungshim L. , Wilkens Lynne R. , Wan Peggy , Hart Steven N. , Hu Chunling , Yadav Siddhartha , Couch Fergus J. , Conti David V. , de Smith Adam J. , Haiman Christopher A.
Published: April 2023

Supplementary Figure from Genetic Risk of Second Primary Cancer in Breast Cancer Survivors: The Multiethnic Cohort Study
Supplementary Data from Retinoic Acid Receptor Activation Reduces Metastatic Prostate Cancer Bone Lesions by Blocking the Endothelial-to-Osteoblast Transition
Authors: Yu Guoyu , Corn Paul G. , Shen Pengfei , Song Jian H. , Lee Yu-Chen , Lin Song-Chang , Pan Jing , Agarwal Sandeep K. , Panaretakis Theocharis , Pacifici Maurizio , Logothetis Christopher J. , Yu-Lee Li-Yuan , Lin Sue-Hwa
Published: April 2023

Supplementary Data from Retinoic Acid Receptor Activation Reduces Metastatic Prostate Cancer Bone Lesions by Blocking the Endothelial-to-Osteoblast Transition
Supplementary Data from Transient Systemic Autophagy Inhibition Is Selectively and Irreversibly Deleterious to Lung Cancer
Authors: Khayati Khoosheh , Bhatt Vrushank , Lan Taijin , Alogaili Fawzi , Wang Wenping , Lopez Enrique , Hu Zhixian Sherrie , Gokhale Samantha , Cassidy Liam , Narita Masashi , Xie Ping , White Eileen , Guo Jessie Yanxiang
Published: April 2023

Supplemental figures and figure legends
Figure S.2 from Loss of LOXL2 Promotes Uterine Hypertrophy and Tumor Progression by Enhancing H3K36ac-Dependent Gene Expression
Authors: Lu Xufeng , Xin Dazhuan E. , Du Juanjuan K. , Zou Quanli C. , Wu Qian , Zhang Yanan S. , Deng Wenhai , Yue Jicheng , Fan Xing S. , Zeng Yuanyuan , Cheng Xiaju , Li Xue , Hou Zhaoyuan , Mohan Man , Zhao Ting C. , Lu Xiaomei , Chang Zhijie , Xu Liyan , Sun Yu , Zu Xiongbing , Zhang Yu , Chinn Y. Eugene
Published: April 2023

Figure S.2
Supplementary Data from The RNA m6A Reader YTHDF1 Is Required for Acute Myeloid Leukemia Progression
Authors: Hong Yun-Guang , Yang Zhigang , Chen Yan , Liu Tian , Zheng Yuyuan , Zhou Chun , Wu Guo-Cai , Chen Yinhui , Xia Juan , Wen Ruiting , Liu Wenxin , Zhao Yi , Chen Jin , Gao Xiangwei , Chen Zhanghui
Published: April 2023

Supplementary_Figures
Supplementary Table 3 from Mapping of the IRF8 Gene Identifies a 3′UTR Variant Associated with Risk of Chronic Lymphocytic Leukemia but not Other Common Non-Hodgkin Lymphoma Subtypes
Authors: Slager Susan L. , Achenbach Sara J. , Asmann Yan W. , Camp Nicola J. , Rabe Kari G. , Goldin Lynn R. , Call Timothy G. , Shanafelt Tait D. , Kay Neil E. , Cunningham Julie M. , Wang Alice H. , Weinberg J. Brice , Norman Aaron D. , Link Brian K. , Leis Jose F. , Vachon Celine M. , Lanasa Mark C. , Caporaso Neil E. , Novak Anne J. , Cerhan James R.
Published: April 2023

PDF file - 47K, Association of MCL risk with IRF8 sequencing and tagged SNPs located on 16q24
Supplementary Figure 2 from Utility of Progranulin and Serum Leukocyte Protease Inhibitor as Diagnostic and Prognostic Biomarkers in Ovarian Cancer
Authors: Carlson Aaron M. , Maurer Matthew J. , Goergen Krista M. , Kalli Kimberly R. , Erskine Courtney L. , Behrens Marshall D. , Knutson Keith L. , Block Matthew S.
Published: April 2023

PDF - 118K, Scatter plot comparing CA-125 concentrations and SLPI concentrations in control, early EOC, and advanced EOC patients. The dashed line shows the institutional upper limit of normal for CA-125 (35 units/ml).
Supplementary Figure 1 from Utility of Progranulin and Serum Leukocyte Protease Inhibitor as Diagnostic and Prognostic Biomarkers in Ovarian Cancer
Authors: Carlson Aaron M. , Maurer Matthew J. , Goergen Krista M. , Kalli Kimberly R. , Erskine Courtney L. , Behrens Marshall D. , Knutson Keith L. , Block Matthew S.
Published: April 2023

PDF - 93K, Receiver-operator curve for SLPI in early stage EOC versus control patients (A) and advanced stage EOC versus control patients (B).
Supplementary Table 1 from Aspirin Use and Reduced Risk of Pancreatic Cancer
Authors: Risch Harvey A. , Lu Lingeng , Streicher Samantha A. , Wang Jing , Zhang Wei , Ni Quanxing , Kidd Mark S. , Yu Herbert , Gao Yu-Tang
Published: April 2023

Published studies examining ever regular use of aspirin and risk of pancreatic cancer.
Supplemental table 4 from Menthol Smokers: Metabolomic Profiling and Smoking Behavior
Authors: Hsu Ping-Ching , Lan Renny S. , Brasky Theodore M. , Marian Catalin , Cheema Amrita K. , Ressom Habtom W. , Loffredo Christopher A. , Pickworth Wallace B. , Shields Peter G.
Published: April 2023

Correlation of the 2nd nicotine boost to smoking-related variables.
Supplemental Table from Urinary Melatonin in Relation to Postmenopausal Breast Cancer Risk According to Melatonin 1 Receptor Status
Authors: Devore Elizabeth E. , Warner Erica T. , Eliassen A. Heather , Brown Susan B. , Beck Andrew H. , Hankinson Susan E. , Schernhammer Eva S.
Published: April 2023

Supplemental Table. Relative risks (RR) and 95% confidence intervals of breast cancer across quartiles of creatinine-standardized urinary melatonin level, including cases occurring between June 1, 2006 and May 31, 2012 and their matched controls (n=422).
Supplemental figure 1 from Menthol Smokers: Metabolomic Profiling and Smoking Behavior
Authors: Hsu Ping-Ching , Lan Renny S. , Brasky Theodore M. , Marian Catalin , Cheema Amrita K. , Ressom Habtom W. , Loffredo Christopher A. , Pickworth Wallace B. , Shields Peter G.
Published: April 2023

Significant correlations of the 2nd MG boost to smoking-related variables.
Supplementary Table 4 from Relationships between Circulating and Intraprostatic Sex Steroid Hormone Concentrations
Authors: Cook Michael B. , Stanczyk Frank Z. , Wood Shannon N. , Pfeiffer Ruth M. , Hafi Muhannad , Veneroso Carmela C. , Lynch Barlow , Falk Roni T. , Zhou Cindy Ke , Niwa Shelley , Emanuel Eric , Gao Yu-Tang , Hemstreet George P. , Zolfghari Ladan , Carroll Peter R. , Manyak Michael J. , Sesterhann Isabell A. , Levine Paul H. , Hsing Ann W.
Published: April 2023

Supplementary Table 4: Multivariable Linear Regressions between Log Continous Serum and Tissue Hormones Stratified by Race
Supplementary Table 3 from Relationships between Circulating and Intraprostatic Sex Steroid Hormone Concentrations
Authors: Cook Michael B. , Stanczyk Frank Z. , Wood Shannon N. , Pfeiffer Ruth M. , Hafi Muhannad , Veneroso Carmela C. , Lynch Barlow , Falk Roni T. , Zhou Cindy Ke , Niwa Shelley , Emanuel Eric , Gao Yu-Tang , Hemstreet George P. , Zolfghari Ladan , Carroll Peter R. , Manyak Michael J. , Sesterhann Isabell A. , Levine Paul H. , Hsing Ann W.
Published: April 2023

Supplementary Table 3: Multivariable Linear Regressions between Log Continous Serum and Tissue Hormones Stratified by Gleason Score
Supplementary Table 2 from Genome-Wide Association Study Identifies Possible Genetic Risk Factors for Colorectal Adenomas
Authors: Edwards Todd L. , Shrubsole Martha J. , Cai Qiuyin , Li Guoliang , Dai Qi , Rex Douglas K. , Ulbright Thomas M. , Fu Zhenming , Delahanty Ryan H. , Murff Harvey J. , Smalley Walter , Ness Reid M. , Zheng Wei
Published: April 2023

PDF file - 56K, Results from tests of association at all SNPs genotyped in replication experiments from the discovery, replication, and combined evidence from both phases using meta-analysis after excluding 534 hyperplastic polyp-only cases.