bluuebunny/crossref_metadata_2025 huggingface dataset:
Supplemental Figures S1-5 from MICA-Expressing Monocytes Enhance Natural Killer Cell Fc Receptor-Mediated Antitumor Functions
Authors: Campbell Amanda R. , Duggan Megan C. , Suarez-Kelly Lorena P. , Bhave Neela , Opheim Kallan S. , McMichael Elizabeth L. , Trikha Prashant , Parihar Robin , Luedke Eric , Lewis Adrian , Yung Bryant , Lee Robert , Raulet David , Tridandapani Susheela , Groh Veronika , Yu Lianbo , Yildiz Vedat , Byrd John C. , Caligiuri Michael A. , Carson William E.
Published: April 2023

Supplemental Figure S1. Contribution of NK and T cells to IFN-gamma production. Supplemental Figure S2. MICA expression on monocytes. Supplemental Figure S3. NKG2D Ligand Expression on C1R and C1R-MICA Cell Lines. Supplemental Figure S4. Monocyte MICA expression does not correlate with NK cell IFN-gamma production. Supplemental Figure S5. NKG2D and MICA expression levels prior to and following co-culture.
Table S3 from Combination Gemcitabine and WT1 Peptide Vaccination Improves Progression-Free Survival in Advanced Pancreatic Ductal Adenocarcinoma: A Phase II Randomized Study
Authors: Nishida Sumiyuki , Ishikawa Takeshi , Egawa Shinichi , Koido Shigeo , Yanagimoto Hiroaki , Ishii Jun , Kanno Yoshihide , Kokura Satoshi , Yasuda Hiroaki , Oba Mari Saito , Sato Maho , Morimoto Soyoko , Fujiki Fumihiro , Eguchi Hidetoshi , Nagano Hiroaki , Kumanogoh Atsushi , Unno Michiaki , Kon Masanori , Shimada Hideaki , Ito Kei , Homma Sadamu , Oka Yoshihiro , Morita Satoshi , Sugiyama Haruo
Published: April 2023

Association between DTH positivity and 5-times or higher increase in WT1-CTLs
Supplementary Figures 1 and 2 from Antagonism of IAPs Enhances CAR T-cell Efficacy
Authors: Michie Jessica , Beavis Paul A. , Freeman Andrew J. , Vervoort Stephin J. , Ramsbottom Kelly M. , Narasimhan Vignesh , Lelliott Emily J. , Lalaoui Najoua , Ramsay Robert G. , Johnstone Ricky W. , Silke John , Darcy Phillip K. , Voskoboinik Ilia , Kearney Conor J. , Oliaro Jane
Published: April 2023

Figures S1 and S2
Figure S7 from Immune-Checkpoint Blockade Opposes CD8+ T-cell Suppression in Human and Murine Cancer
Authors: Pfannenstiel Lukas W. , Diaz-Montero C. Marcela , Tian Ye F. , Scharpf Joseph , Ko Jennifer S. , Gastman Brian R.
Published: April 2023

Supplementary Figure 7. CD3+ CD8+ PD-1+ Tim-3+ T cells were FACS sorted from dissociated TC-1 tumor grown in C57BL/6 mice. Sorted T cells were then stimulated for 12h in vitro in 96-well plates coated with anti-CD3 and anti-CD28. Golgistoptm was added to the culture to arrest vessicle exocytosis. Cells were then permeabilized and stained for IL-10 and IFNγ or isotype control antibodies used at the same concentration.
Movie 1 from Antagonism of IAPs Enhances CAR T-cell Efficacy
Authors: Michie Jessica , Beavis Paul A. , Freeman Andrew J. , Vervoort Stephin J. , Ramsbottom Kelly M. , Narasimhan Vignesh , Lelliott Emily J. , Lalaoui Najoua , Ramsay Robert G. , Johnstone Ricky W. , Silke John , Darcy Phillip K. , Voskoboinik Ilia , Kearney Conor J. , Oliaro Jane
Published: April 2023

Movie S1
Supplementary Figures S1-6 from Rapamycin Prevents Surgery-Induced Immune Dysfunction in Patients with Bladder Cancer
Authors: Svatek Robert S. , Ji Niannian , de Leon Essel , Mukherjee Neelam Z. , Kabra Aashish , Hurez Vincent , Nicolas Marlo , Michalek Joel E. , Javors Martin , Wheeler Karen , Sharp Z. Dave , Livi Carolina B. , Shu Zhen-Ju , Henkes David , Curiel Tyler J.
Published: April 2023

Supplementary Figures S1-6
Figure S4 from Response to Immune Checkpoint Inhibition in Two Patients with Alveolar Soft-Part Sarcoma
Authors: Lewin Jeremy , Davidson Scott , Anderson Nathaniel D. , Lau Beatrice Y. , Kelly Jacalyn , Tabori Uri , Salah Samer , Butler Marcus O. , Aung Kyaw L. , Shlien Adam , Dickson Brendan C. , Abdul Razak Albiruni R.
Published: April 2023

FCE electrophoretograms for Patient 1 and 2
Supplementary Figure 3 from Combination Therapy Using Ruxolitinib and Oncolytic HSV Renders Resistant MPNSTs Susceptible to Virotherapy
Authors: Ghonime Mohammed G. , Cassady Kevin A.
Published: April 2023

Supplementary Figure 3: Combined RUX and C134 treatment effect on the infiltrating lymphocytes
Supplementary Figure 2 from Combination Therapy Using Ruxolitinib and Oncolytic HSV Renders Resistant MPNSTs Susceptible to Virotherapy
Authors: Ghonime Mohammed G. , Cassady Kevin A.
Published: April 2023

Supplementary Figure 2: Viral replication is integral to RUX/C134 anti-tumor effect.
Figure S1 from Response to Immune Checkpoint Inhibition in Two Patients with Alveolar Soft-Part Sarcoma
Authors: Lewin Jeremy , Davidson Scott , Anderson Nathaniel D. , Lau Beatrice Y. , Kelly Jacalyn , Tabori Uri , Salah Samer , Butler Marcus O. , Aung Kyaw L. , Shlien Adam , Dickson Brendan C. , Abdul Razak Albiruni R.
Published: April 2023

Mutational burden of tumor according to different subtypes.
Figure S3 from IAP Antagonists Enhance Cytokine Production from Mouse and Human iNKT Cells
Authors: Clancy-Thompson Eleanor , Ali Lestat , Bruck Patrick T. , Exley Mark A. , Blumberg Richard S. , Dranoff Glenn , Dougan Michael , Dougan Stephanie K.
Published: April 2023

S3: IAP antagonism alone does not induce apoptosis of iNKT cells or conventional T cells.
Figure S1 from IAP Antagonists Enhance Cytokine Production from Mouse and Human iNKT Cells
Authors: Clancy-Thompson Eleanor , Ali Lestat , Bruck Patrick T. , Exley Mark A. , Blumberg Richard S. , Dranoff Glenn , Dougan Michael , Dougan Stephanie K.
Published: April 2023

S1: Structure of IAP antagonists
Figure S6 from Cripto-1 Plasmid DNA Vaccination Targets Metastasis and Cancer Stem Cells in Murine Mammary Carcinoma
Authors: Witt Kristina , Ligtenberg Maarten A. , Conti Laura , Lanzardo Stefania , Ruiu Roberto , Wallmann Tatjana , Tufvesson-Stiller Helena , Chambers Benedict J. , Rolny Charlotte , Lladser Alvaro , Lundqvist Andreas , Cavallo Federica , Kiessling Rolf
Published: April 2023

qPCR analysis of Cripto-1 in lungs of wt BALB/c and BALB-neuT mice.
Figure S2 from Cripto-1 Plasmid DNA Vaccination Targets Metastasis and Cancer Stem Cells in Murine Mammary Carcinoma
Authors: Witt Kristina , Ligtenberg Maarten A. , Conti Laura , Lanzardo Stefania , Ruiu Roberto , Wallmann Tatjana , Tufvesson-Stiller Helena , Chambers Benedict J. , Rolny Charlotte , Lladser Alvaro , Lundqvist Andreas , Cavallo Federica , Kiessling Rolf
Published: April 2023

NK cell cytotoxicity against 4T1mCr-1 cell line.
Figure S1 from Cripto-1 Plasmid DNA Vaccination Targets Metastasis and Cancer Stem Cells in Murine Mammary Carcinoma
Authors: Witt Kristina , Ligtenberg Maarten A. , Conti Laura , Lanzardo Stefania , Ruiu Roberto , Wallmann Tatjana , Tufvesson-Stiller Helena , Chambers Benedict J. , Rolny Charlotte , Lladser Alvaro , Lundqvist Andreas , Cavallo Federica , Kiessling Rolf
Published: April 2023

Western blot analysis of Cripto-1 expression in murine breast cancer cell lines.
Supplementary table 1 from IL13-Mediated Dectin-1 and Mannose Receptor Overexpression Promotes Macrophage Antitumor Activities through Recognition of Sialylated Tumor Cells
Authors: Alaeddine Mohamad , Prat Mélissa , Poinsot Véréna , Gouazé-Andersson Valérie , Authier Hélène , Meunier Etienne , Lefèvre Lise , Alric Camille , Dardenne Christophe , Bernad José , Alric Laurent , Segui Bruno , Balard Patricia , Couderc François , Couderc Bettina , Pipy Bernard , Coste Agnès
Published: April 2023

Primer sequences
Supplementary Figure S1 from Interleukin 33 Signaling Restrains Sporadic Colon Cancer in an Interferon-γ–Dependent Manner
Authors: Eissmann Moritz F. , Dijkstra Christine , Wouters Merridee A. , Baloyan David , Mouradov Dmitri , Nguyen Paul M. , Davalos-Salas Mercedes , Putoczki Tracy L. , Sieber Oliver M. , Mariadason John M. , Ernst Matthias , Masson Frederick
Published: April 2023

Fig S1. IL-33 and St2 protein expression in sporadic colon cancer.
Supplementary Figure 3 from Disruption of IFN-I Signaling Promotes HER2/Neu Tumor Progression and Breast Cancer Stem Cells
Authors: Castiello Luciano , Sestili Paola , Schiavoni Giovanna , Dattilo Rosanna , Monque Domenica M. , Ciaffoni Fiorella , Iezzi Manuela , Lamolinara Alessia , Sistigu Antonella , Moschella Federica , Pacca Anna Maria , Macchia Daniele , Ferrantini Maria , Zeuner Ann , Biffoni Mauro , Proietti Enrico , Belardelli Filippo , Aricò Eleonora
Published: April 2023

Tumor growth of neuT and IFNAR-neuT tumor cells transplanted subcutaneously in NSG mice
Supplementary Figure 2 from Disruption of IFN-I Signaling Promotes HER2/Neu Tumor Progression and Breast Cancer Stem Cells
Authors: Castiello Luciano , Sestili Paola , Schiavoni Giovanna , Dattilo Rosanna , Monque Domenica M. , Ciaffoni Fiorella , Iezzi Manuela , Lamolinara Alessia , Sistigu Antonella , Moschella Federica , Pacca Anna Maria , Macchia Daniele , Ferrantini Maria , Zeuner Ann , Biffoni Mauro , Proietti Enrico , Belardelli Filippo , Aricò Eleonora
Published: April 2023

Kaplan-Meier showing RFS analysis of breast cancer patients divided by subtype according to IFNAR-neuT overexpressed genes
Supplementary Data from Autocrine TGFβ Is a Survival Factor for Monocytes and Drives Immunosuppressive Lineage Commitment
Authors: Gonzalez-Junca Alba , Driscoll Kyla E. , Pellicciotta Ilenia , Du Shisuo , Lo Chen Hao , Roy Ritu , Parry Renate , Tenvooren Iliana , Marquez Diana M. , Spitzer Matthew H. , Barcellos-Hoff Mary Helen
Published: April 2023

Supplemental tables and figures
Figure S4 from The Immune Checkpoint Modulator OX40 and Its Ligand OX40L in NK-Cell Immunosurveillance and Acute Myeloid Leukemia
Authors: Nuebling Tina , Schumacher Carla Emilia , Hofmann Martin , Hagelstein Ilona , Schmiedel Benjamin Joachim , Maurer Stefanie , Federmann Birgit , Rothfelder Kathrin , Roerden Malte , Dörfel Daniela , Schneider Pascal , Jung Gundram , Salih Helmut Rainer
Published: April 2023

Correlation of OX40 expression on AML cells and NK cell count and activation.
Figure S2 from The Immune Checkpoint Modulator OX40 and Its Ligand OX40L in NK-Cell Immunosurveillance and Acute Myeloid Leukemia
Authors: Nuebling Tina , Schumacher Carla Emilia , Hofmann Martin , Hagelstein Ilona , Schmiedel Benjamin Joachim , Maurer Stefanie , Federmann Birgit , Rothfelder Kathrin , Roerden Malte , Dörfel Daniela , Schneider Pascal , Jung Gundram , Salih Helmut Rainer
Published: April 2023

Correlative analysis of basal cytokine release, proliferation and apoptosis with OX40 expression on AML cells.
Figure S1 from The Immune Checkpoint Modulator OX40 and Its Ligand OX40L in NK-Cell Immunosurveillance and Acute Myeloid Leukemia
Authors: Nuebling Tina , Schumacher Carla Emilia , Hofmann Martin , Hagelstein Ilona , Schmiedel Benjamin Joachim , Maurer Stefanie , Federmann Birgit , Rothfelder Kathrin , Roerden Malte , Dörfel Daniela , Schneider Pascal , Jung Gundram , Salih Helmut Rainer
Published: April 2023

Expression of OX40 in CML and MDS.
Table S2 from Treatment-Related Adverse Events Predict Improved Clinical Outcome in NSCLC Patients on KEYNOTE-001 at a Single Center
Authors: Lisberg Aaron , Tucker D. Andrew , Goldman Jonathan W. , Wolf Brian , Carroll James , Hardy Ariana , Morris Karolyn , Linares Paulina , Adame Carlos , Spiegel Marshall L. , Wells Courtney , McKenzie Jordan , Ledezma Blanca , Mendenhall Melody , Abarca Phillip , Bornazyan Krikor , Hunt Jaime , Moghadam Nima , Chong Natalie , Nameth Danielle , Marx Caitlin , Madrigal John , Vangala Sitaram , Shaverdian Narek , Elashoff David , Garon Edward B.
Published: April 2023

Table S2: Demographics of the 97 NSCLC patients treated at UCLA on KEYNOTE-001 (N=97) compared with the demographics of the total KEYNOTE-001 study population (n=495). Of note, the UCLA cohort of 97 patients is included in the total KEYNOTE-001 study population of 495 patients.
Table S1 from Treatment-Related Adverse Events Predict Improved Clinical Outcome in NSCLC Patients on KEYNOTE-001 at a Single Center
Authors: Lisberg Aaron , Tucker D. Andrew , Goldman Jonathan W. , Wolf Brian , Carroll James , Hardy Ariana , Morris Karolyn , Linares Paulina , Adame Carlos , Spiegel Marshall L. , Wells Courtney , McKenzie Jordan , Ledezma Blanca , Mendenhall Melody , Abarca Phillip , Bornazyan Krikor , Hunt Jaime , Moghadam Nima , Chong Natalie , Nameth Danielle , Marx Caitlin , Madrigal John , Vangala Sitaram , Shaverdian Narek , Elashoff David , Garon Edward B.
Published: April 2023

Table S1: All adverse events occurring in > 5% of patients in the UCLA NSCLC cohort of 97 patients treated on KEYNOTE-001.
Supplemental Figure 2 legend. from Primary T Cells from Cutaneous T-cell Lymphoma Skin Explants Display an Exhausted Immune Checkpoint Profile
Authors: Querfeld Christiane , Leung Samantha , Myskowski Patricia L. , Curran Shane A. , Goldman Debra A. , Heller Glenn , Wu Xiwei , Kil Sung Hee , Sharma Sneh , Finn Kathleen J. , Horwitz Steven , Moskowitz Alison , Mehrara Babak , Rosen Steven T. , Halpern Allan C. , Young James W.
Published: April 2023

Supplemental Figure 2 legend.
Supplemental Figure 1 from Primary T Cells from Cutaneous T-cell Lymphoma Skin Explants Display an Exhausted Immune Checkpoint Profile
Authors: Querfeld Christiane , Leung Samantha , Myskowski Patricia L. , Curran Shane A. , Goldman Debra A. , Heller Glenn , Wu Xiwei , Kil Sung Hee , Sharma Sneh , Finn Kathleen J. , Horwitz Steven , Moskowitz Alison , Mehrara Babak , Rosen Steven T. , Halpern Allan C. , Young James W.
Published: April 2023

The contour plots shown provide representative gating strategies and histograms used for T cell and DC subsets and immune checkpoint expression
Supplementary Figure S3 from Stromal Fibroblasts Mediate Anti–PD-1 Resistance via MMP-9 and Dictate TGFβ Inhibitor Sequencing in Melanoma
Authors: Zhao Fei , Evans Kathy , Xiao Christine , DeVito Nicholas , Theivanthiran Balamayooran , Holtzhausen Alisha , Siska Peter J. , Blobe Gerard C. , Hanks Brent A.
Published: April 2023

Effect of TGFbeta blockade on FSP IHC in the BRAF-PTEN melanoma model.
Supplementary Figure S2 from Stromal Fibroblasts Mediate Anti–PD-1 Resistance via MMP-9 and Dictate TGFβ Inhibitor Sequencing in Melanoma
Authors: Zhao Fei , Evans Kathy , Xiao Christine , DeVito Nicholas , Theivanthiran Balamayooran , Holtzhausen Alisha , Siska Peter J. , Blobe Gerard C. , Hanks Brent A.
Published: April 2023

EFfect of TGFbeta blockade on TIL PD-1 surface expression.
Table S1 from NK Cell–Specific CDK8 Deletion Enhances Antitumor Responses
Authors: Witalisz-Siepracka Agnieszka , Gotthardt Dagmar , Prchal-Murphy Michaela , Didara Zrinka , Menzl Ingeborg , Prinz Daniela , Edlinger Leo , Putz Eva Maria , Sexl Veronika
Published: April 2023

Quantification of frequency and expression of receptors from Fig. 1F
Table S1 from CCL20 Expression by Tumor-Associated Macrophages Predicts Progression of Human Primary Cutaneous Melanoma
Authors: Samaniego Rafael , Gutiérrez-González Alejandra , Gutiérrez-Seijo Alba , Sánchez-Gregorio Sandra , García-Giménez Jorge , Mercader Enrique , Márquez-Rodas Iván , Avilés José Antonio , Relloso Miguel , Sánchez-Mateos Paloma
Published: April 2023

Supplementary Table S1. List of primary antibodies and primer sequences.
Figure S4 from CCL20 Expression by Tumor-Associated Macrophages Predicts Progression of Human Primary Cutaneous Melanoma
Authors: Samaniego Rafael , Gutiérrez-González Alejandra , Gutiérrez-Seijo Alba , Sánchez-Gregorio Sandra , García-Giménez Jorge , Mercader Enrique , Márquez-Rodas Iván , Avilés José Antonio , Relloso Miguel , Sánchez-Mateos Paloma
Published: April 2023

Supplementary Figure S4. TAM from metastatic primary melanomas express TNF and VEGF-A.
Figure 2S from Combination Therapy for Treating Advanced Drug-Resistant Acute Lymphoblastic Leukemia
Authors: Vicioso Yorleny , Gram Hermann , Beck Rose , Asthana Abhishek , Zhang Keman , Wong Derek P. , Letterio John , Parameswaran Reshmi
Published: April 2023

Supp. Fig. 2 BAFF induces up-regulation of survival pathways. A, PT-3 ALL cells were cultured with VAY736 (20 ÃŽÂ¼g/mL) and recombinant BAFF (0.2 ÃŽÂ¼g/mL) for 72 hours and the expression levels of proliferation genes (p100, p52) and survival genes (Pim-1, BclÃ,Â­xl, and A-1) were measured by Western blotting. GAPDH was used as protein loading control.
Supplementary Method Table 1 from Targeted Delivery of IL2 to the Tumor Stroma Potentiates the Action of Immune Checkpoint Inhibitors by Preferential Activation of NK and CD8+ T Cells
Authors: Hutmacher Cornelia , Gonzalo Núñez Nicolás , Liuzzi Anna Rita , Becher Burkhard , Neri Dario
Published: April 2023

antibody clone list
Supplementary Table 1 from Trifluridine/Tipiracil plus Oxaliplatin Improves PD-1 Blockade in Colorectal Cancer by Inducing Immunogenic Cell Death and Depleting Macrophages
Authors: Limagne Emeric , Thibaudin Marion , Nuttin Lisa , Spill Aodrenn , Derangère Valentin , Fumet Jean-David , Amellal Nadia , Peranzoni Elisa , Cattan Valérie , Ghiringhelli François
Published: April 2023

Table 1
Supplementary Figure Legends from Trifluridine/Tipiracil plus Oxaliplatin Improves PD-1 Blockade in Colorectal Cancer by Inducing Immunogenic Cell Death and Depleting Macrophages
Authors: Limagne Emeric , Thibaudin Marion , Nuttin Lisa , Spill Aodrenn , Derangère Valentin , Fumet Jean-David , Amellal Nadia , Peranzoni Elisa , Cattan Valérie , Ghiringhelli François
Published: April 2023

Supplementary Figure Legends
Supplementary Figure 1 from Targeted Delivery of IL2 to the Tumor Stroma Potentiates the Action of Immune Checkpoint Inhibitors by Preferential Activation of NK and CD8+ T Cells
Authors: Hutmacher Cornelia , Gonzalo Núñez Nicolás , Liuzzi Anna Rita , Becher Burkhard , Neri Dario
Published: April 2023

Microscopic analysis of EDA expression on CT26 and MC38 tumors
Supplementary Figure 2 from Combined Low Densities of FoxP3+ and CD3+ Tumor-Infiltrating Lymphocytes Identify Stage II Colorectal Cancer at High Risk of Progression
Authors: Cavalleri Tommaso , Bianchi Paolo , Basso Gianluca , Celesti Giuseppe , Grizzi Fabio , Bossi Paola , Greco Luana , Pitrone Calogero , Valtorta Emanuele , Mauri Gianluca , Truini Mauro , Dall'Olio Filippo Gustavo , Brandi Giovanni , Sartore-Bianchi Andrea , Ricciardiello Luigi , Torri Valter , Rimassa Lorenza , Siena Salvatore , Mantovani Alberto , Malesci Alberto , Laghi Luigi
Published: April 2023

Kaplan-Meier curves for the duration of disease-free survival in joined cohorts with stage II CRC as to adjuvant treatment.
Supplementary Figures from Enzalutamide, an Androgen Receptor Antagonist, Enhances Myeloid Cell–Mediated Immune Suppression and Tumor Progression
Authors: Consiglio Camila R. , Udartseva Olga , Ramsey Kimberly D. , Bush Chioma , Gollnick Sandra O.
Published: April 2023

Supplementary figures 1-6
Movie S2 Legend from Coexpression of Inhibitory Receptors Enriches for Activated and Functional CD8+ T Cells in Murine Syngeneic Tumor Models
Authors: Xiong Huizhong , Mittman Stephanie , Rodriguez Ryan , Pacheco-Sanchez Patricia , Moskalenko Marina , Yang Yagai , Elstrott Justin , Ritter Alex T. , Müller Sören , Nickles Dorothee , Arenzana Teresita L. , Capietto Aude-Hélène , Delamarre Lélia , Modrusan Zora , Rutz Sascha , Mellman Ira , Cubas Rafael
Published: April 2023

Cytotoxicity assay with sorted PD1- CD8 T cells
Movie S1 from Coexpression of Inhibitory Receptors Enriches for Activated and Functional CD8+ T Cells in Murine Syngeneic Tumor Models
Authors: Xiong Huizhong , Mittman Stephanie , Rodriguez Ryan , Pacheco-Sanchez Patricia , Moskalenko Marina , Yang Yagai , Elstrott Justin , Ritter Alex T. , Müller Sören , Nickles Dorothee , Arenzana Teresita L. , Capietto Aude-Hélène , Delamarre Lélia , Modrusan Zora , Rutz Sascha , Mellman Ira , Cubas Rafael
Published: April 2023

Cytotoxicity assay with sorted PD1+LAG3+TIM3+ CD8 T cells
Database of flow cytometry parameters in tumor models from Coexpression of Inhibitory Receptors Enriches for Activated and Functional CD8+ T Cells in Murine Syngeneic Tumor Models
Authors: Xiong Huizhong , Mittman Stephanie , Rodriguez Ryan , Pacheco-Sanchez Patricia , Moskalenko Marina , Yang Yagai , Elstrott Justin , Ritter Alex T. , Müller Sören , Nickles Dorothee , Arenzana Teresita L. , Capietto Aude-Hélène , Delamarre Lélia , Modrusan Zora , Rutz Sascha , Mellman Ira , Cubas Rafael
Published: April 2023

FACS parameter database
Table S4 from The Tumor Immune Microenvironment Drives a Prognostic Relevance That Correlates with Bladder Cancer Subtypes
Authors: Pfannstiel Carolin , Strissel Pamela L. , Chiappinelli Katherine B. , Sikic Danijel , Wach Sven , Wirtz Ralph M. , Wullweber Adrian , Taubert Helge , Breyer Johannes , Otto Wolfgang , Worst Thomas , Burger Maximilian , Wullich Bernd , Bolenz Christian , Fuhrich Nicole , Geppert Carol I. , Weyerer Veronika , Stoehr Robert , Bertz Simone , Keck Bastian , Erlmeier Franziska , Erben Philipp , Hartmann Arndt , Strick Reiner , Eckstein Markus
Published: April 2023

Inflammation gene signature TCGA: Full table of included genes.
Supplementary Figures and Legends from Cancer-Associated Fibroblasts Promote Immunosuppression by Inducing ROS-Generating Monocytic MDSCs in Lung Squamous Cell Carcinoma
Authors: Xiang Handan , Ramil Carlo P. , Hai Josephine , Zhang Chunsheng , Wang Huijun , Watkins Amanda A. , Afshar Roshi , Georgiev Peter , Sze Marc A. , Song Xuelei S. , Curran Patrick J. , Cheng Mangeng , Miller J. Richard , Sun Dongyu , Loboda Andrey , Jia Yanlin , Moy Lily Y. , Chi An , Brandish Philip E.
Published: April 2023

Supplementary Figures 1-11
Table S5 from Proteogenomics Uncovers a Vast Repertoire of Shared Tumor-Specific Antigens in Ovarian Cancer
Authors: Zhao Qingchuan , Laverdure Jean-Philippe , Lanoix Joël , Durette Chantal , Côté Caroline , Bonneil Éric , Laumont Céline M. , Gendron Patrick , Vincent Krystel , Courcelles Mathieu , Lemieux Sébastien , Millar Douglas G. , Ohashi Pamela S. , Thibault Pierre , Perreault Claude
Published: April 2023

Table S5
Table S4 from Proteogenomics Uncovers a Vast Repertoire of Shared Tumor-Specific Antigens in Ovarian Cancer
Authors: Zhao Qingchuan , Laverdure Jean-Philippe , Lanoix Joël , Durette Chantal , Côté Caroline , Bonneil Éric , Laumont Céline M. , Gendron Patrick , Vincent Krystel , Courcelles Mathieu , Lemieux Sébastien , Millar Douglas G. , Ohashi Pamela S. , Thibault Pierre , Perreault Claude
Published: April 2023

Table S4
Table S2 from Proteogenomics Uncovers a Vast Repertoire of Shared Tumor-Specific Antigens in Ovarian Cancer
Authors: Zhao Qingchuan , Laverdure Jean-Philippe , Lanoix Joël , Durette Chantal , Côté Caroline , Bonneil Éric , Laumont Céline M. , Gendron Patrick , Vincent Krystel , Courcelles Mathieu , Lemieux Sébastien , Millar Douglas G. , Ohashi Pamela S. , Thibault Pierre , Perreault Claude
Published: April 2023

Table S2
Supplementary Table 3. from Accumulation of Circulating CCR7+ Natural Killer Cells Marks Melanoma Evolution and Reveals a CCL19-Dependent Metastatic Pathway
Authors: Cristiani Costanza Maria , Turdo Alice , Ventura Valeria , Apuzzo Tiziana , Capone Mariaelena , Madonna Gabriele , Mallardo Domenico , Garofalo Cinzia , Giovannone Emilia Dora , Grimaldi Antonio M. , Tallerico Rossana , Marcenaro Emanuela , Pesce Silvia , Del Zotto Genny , Agosti Valter , Costanzo Francesco Saverio , Gulletta Elio , Rizzo Aroldo , Moretta Alessandro , Karre Klas , Ascierto Paolo A. , Todaro Matilde , Carbone Ennio
Published: April 2023

Immune, biological and clinical variables used to built OPLS-DA model
Supplementary Table 2. from Accumulation of Circulating CCR7+ Natural Killer Cells Marks Melanoma Evolution and Reveals a CCL19-Dependent Metastatic Pathway
Authors: Cristiani Costanza Maria , Turdo Alice , Ventura Valeria , Apuzzo Tiziana , Capone Mariaelena , Madonna Gabriele , Mallardo Domenico , Garofalo Cinzia , Giovannone Emilia Dora , Grimaldi Antonio M. , Tallerico Rossana , Marcenaro Emanuela , Pesce Silvia , Del Zotto Genny , Agosti Valter , Costanzo Francesco Saverio , Gulletta Elio , Rizzo Aroldo , Moretta Alessandro , Karre Klas , Ascierto Paolo A. , Todaro Matilde , Carbone Ennio
Published: April 2023

Antibodies used for flow cytometry analysis
Figure S1 from Radiotherapy and Cisplatin Increase Immunotherapy Efficacy by Enabling Local and Systemic Intratumoral T-cell Activity
Authors: Kroon Paula , Frijlink Elselien , Iglesias-Guimarais Victoria , Volkov Andriy , van Buuren Marit M. , Schumacher Ton N. , Verheij Marcel , Borst Jannie , Verbrugge Inge
Published: April 2023

Expression of the immunotherapy targets CD137 and PD-1 in AT-3 tumor-bearing mice.
Figure S4 from Human CD4+ T Cells Specific for Merkel Cell Polyomavirus Localize to Merkel Cell Carcinomas and Target a Required Oncogenic Domain
Authors: Longino Natalie V. , Yang Junbao , Iyer Jayasri G. , Ibrani Dafina , Chow I-Ting , Laing Kerry J. , Campbell Victoria L. , Paulson Kelly G. , Kulikauskas Rima M. , Church Candice D. , James Eddie A. , Nghiem Paul , Kwok William W. , Koelle David M.
Published: April 2023

CD4 T cells recognize the MCPyV epitope 'MDL' (CT-1-13).
Table S2 from Phase II Trial of Ipilimumab with Stereotactic Radiation Therapy for Metastatic Disease: Outcomes, Toxicities, and Low-Dose Radiation–Related Abscopal Responses
Authors: Welsh James W. , Tang Chad , de Groot Patricia , Naing Aung , Hess Kenneth R. , Heymach John V. , Papadimitrakopoulou Vassiliki A. , Cushman Taylor R. , Subbiah Vivek , Chang Joe Y. , Simon George R. , Ramapriyan Rishab , Barsoumian Hampartsoum B. , Menon Hari , Cortez Maria Angelica , Massarelli Erminia , Nguyen Quynh , Sharma Padmanee , Allison James P. , Diab Adi , Verma Vivek , Raju Uma , Shaaban Sherif G. , Dadu Ramona , Cabanillas Maria E. , Wang Kelvin , Anderson Clark , Gomez Daniel R. , Hahn Stephen , Komaki Ritsuko , Hong David S.
Published: April 2023

Response Rates of Unirradiated Tumors by Target site and Histology
Supplementary Table 1 from CAMK1D Triggers Immune Resistance of Human Tumor Cells Refractory to Anti–PD-L1 Treatment
Authors: Volpin Valentina , Michels Tillmann , Sorrentino Antonio , Menevse Ayse N. , Knoll Gertrud , Ditz Madlen , Milenkovic Vladimir M. , Chen Chih-Yeh , Rathinasamy Anchana , Griewank Klaus , Boutros Michael , Haferkamp Sebastian , Berneburg Mark , Wetzel Christian H. , Seckinger Anja , Hose Dirk , Goldschmidt Hartmut , Ehrenschwender Martin , Witzens-Harig Mathias , Szoor Arpad , Vereb Gyorgy , Khandelwal Nisit , Beckhove Philipp
Published: April 2023

siRNA library
Supplementary Figures from CAMK1D Triggers Immune Resistance of Human Tumor Cells Refractory to Anti–PD-L1 Treatment
Authors: Volpin Valentina , Michels Tillmann , Sorrentino Antonio , Menevse Ayse N. , Knoll Gertrud , Ditz Madlen , Milenkovic Vladimir M. , Chen Chih-Yeh , Rathinasamy Anchana , Griewank Klaus , Boutros Michael , Haferkamp Sebastian , Berneburg Mark , Wetzel Christian H. , Seckinger Anja , Hose Dirk , Goldschmidt Hartmut , Ehrenschwender Martin , Witzens-Harig Mathias , Szoor Arpad , Vereb Gyorgy , Khandelwal Nisit , Beckhove Philipp
Published: April 2023

Supplementary Figures 1-7
Supplementary Tables from Metabolome of Pancreatic Juice Delineates Distinct Clinical Profiles of Pancreatic Cancer and Reveals a Link between Glucose Metabolism and PD-1+ Cells
Authors: Cortese Nina , Capretti Giovanni , Barbagallo Marialuisa , Rigamonti Alessandra , Takis Panteleimon G. , Castino Giovanni F. , Vignali Debora , Maggi Giulia , Gavazzi Francesca , Ridolfi Cristina , Nappo Gennaro , Donisi Greta , Erreni Marco , Avigni Roberta , Rahal Daoud , Spaggiari Paola , Roncalli Massimo , Cappello Paola , Novelli Francesco , Monti Paolo , Zerbi Alessandro , Allavena Paola , Mantovani Alberto , Marchesi Federica
Published: April 2023

Supplementary Tables
Figure S7 from Mammary Tumor Cells with High Metastatic Potential Are Hypersensitive to Macrophage-Derived HGF
Authors: Kitamura Takanori , Kato Yu , Brownlie Demi , Soong Daniel Y.H. , Sugano Gaël , Kippen Nicolle , Li Jiufeng , Doughty-Shenton Dahlia , Carragher Neil , Pollard Jeffrey W.
Published: April 2023

Effects of MET signaling on susceptibility of cancer cells to NK cells.
Figure S5 from Mammary Tumor Cells with High Metastatic Potential Are Hypersensitive to Macrophage-Derived HGF
Authors: Kitamura Takanori , Kato Yu , Brownlie Demi , Soong Daniel Y.H. , Sugano Gaël , Kippen Nicolle , Li Jiufeng , Doughty-Shenton Dahlia , Carragher Neil , Pollard Jeffrey W.
Published: April 2023

NK cell cytotoxicity against E0771-LG cells.
Figure S3 from Mammary Tumor Cells with High Metastatic Potential Are Hypersensitive to Macrophage-Derived HGF
Authors: Kitamura Takanori , Kato Yu , Brownlie Demi , Soong Daniel Y.H. , Sugano Gaël , Kippen Nicolle , Li Jiufeng , Doughty-Shenton Dahlia , Carragher Neil , Pollard Jeffrey W.
Published: April 2023

Validation of antibodies used to detect HGF and immune cells.
Supplementary Data (for Review only) from STING Signaling in Melanoma Cells Shapes Antigenicity and Can Promote Antitumor T-cell Activity
Authors: Falahat Rana , Perez-Villarroel Patricio , Mailloux Adam W. , Zhu Genyuan , Pilon-Thomas Shari , Barber Glen N. , Mulé James J.
Published: April 2023

Figure S1-S6
Supplementary Tables from Microsatellite-Stable Tumors with High Mutational Burden Benefit from Immunotherapy
Authors: Goodman Aaron M. , Sokol Ethan S. , Frampton Garrett M. , Lippman Scott M. , Kurzrock Razelle
Published: April 2023

Supplemental Tables 1 and 2
Supplementary Figure 1 from Inhibition of the SRC Kinase HCK Impairs STAT3-Dependent Gastric Tumor Growth in Mice
Authors: Poh Ashleigh R. , Dwyer Amy R. , Eissmann Moritz F. , Chand Ashwini L. , Baloyan David , Boon Louis , Murrey Michael W. , Whitehead Lachlan , O'Brien Megan , Lowell Clifford A. , Putoczki Tracy L. , Pixley Fiona J. , O'Donoghue Robert J.J. , Ernst Matthias
Published: April 2023

Constitutive HCK activity in bone marrow-derived cells enhances STAT3 activation in tumors and tumor-associated macrophages.
Supplementary figures and legends from Immunosuppressive Mediators Impair Proinflammatory Innate Lymphoid Cell Function in Human Malignant Melanoma
Authors: Ercolano Giuseppe , Garcia-Garijo Andrea , Salomé Bérengère , Gomez-Cadena Alejandra , Vanoni Giulia , Mastelic-Gavillet Beatris , Ianaro Angela , Speiser Daniel E. , Romero Pedro , Trabanelli Sara , Jandus Camilla
Published: April 2023

Supplementary figures and legends
Supplementary Figures and Tables from High Numbers of Circulating CD57+ NK Cells Associate with Resistance to HER2-Specific Therapeutic Antibodies in HER2+ Primary Breast Cancer
Authors: Muntasell Aura , Servitja Sònia , Cabo Mariona , Bermejo Begoña , Pérez-Buira Sandra , Rojo Federico , Costa-García Marcel , Arpí Oriol , Moraru Manuela , Serrano Laia , Tusquets Ignasi , Martínez María Teresa , Heredia Gemma , Vera Andrea , Martínez-García María , Soria Laura , Comerma Laura , Santana-Hernández Sara , Eroles Pilar , Rovira Ana , Vilches Carlos , Lluch Ana , Albanell Joan , López-Botet Miguel
Published: April 2023

Supplementary Figures 1-6 and Tables 1-3
Supplementary Figures and Tables 3, 5 and 6 from Single-Cell Transcriptome Analysis Reveals Gene Signatures Associated with T-cell Persistence Following Adoptive Cell Therapy
Authors: Lu Yong-Chen , Jia Li , Zheng Zhili , Tran Eric , Robbins Paul F. , Rosenberg Steven A.
Published: April 2023

Supplementary Figures 1-3 and Tables 1, 3, 4 and 6
Supplementary Figure 3 from Tumor Vessel Normalization, Immunostimulatory Reprogramming, and Improved Survival in Glioblastoma with Combined Inhibition of PD-1, Angiopoietin-2, and VEGF
Authors: Di Tacchio Mariangela , Macas Jadranka , Weissenberger Jakob , Sommer Kathleen , Bähr Oliver , Steinbach Joachim P. , Senft Christian , Seifert Volker , Glas Martin , Herrlinger Ulrich , Krex Dietmar , Meinhardt Matthias , Weyerbrock Astrid , Timmer Marco , Goldbrunner Roland , Deckert Martina , Scheel Andreas H. , Büttner Reinhard , Grauer Oliver M. , Schittenhelm Jens , Tabatabai Ghazaleh , Harter Patrick N. , Günther Stefan , Devraj Kavi , Plate Karl H. , Reiss Yvonne
Published: April 2023

Supplementary Figure 3 demonstrates that dual anti-angiogenic and PD-1 therapy normalized the vasculature at the morphological level
Movie 2 from Tumor Vessel Normalization, Immunostimulatory Reprogramming, and Improved Survival in Glioblastoma with Combined Inhibition of PD-1, Angiopoietin-2, and VEGF
Authors: Di Tacchio Mariangela , Macas Jadranka , Weissenberger Jakob , Sommer Kathleen , Bähr Oliver , Steinbach Joachim P. , Senft Christian , Seifert Volker , Glas Martin , Herrlinger Ulrich , Krex Dietmar , Meinhardt Matthias , Weyerbrock Astrid , Timmer Marco , Goldbrunner Roland , Deckert Martina , Scheel Andreas H. , Büttner Reinhard , Grauer Oliver M. , Schittenhelm Jens , Tabatabai Ghazaleh , Harter Patrick N. , Günther Stefan , Devraj Kavi , Plate Karl H. , Reiss Yvonne
Published: April 2023

Pericyte coverage after PD-1 monotherapy (CollagenIV, red; desmin, green)
Supplementary Figure 1 from Mediators of Inflammation-Driven Expansion, Trafficking, and Function of Tumor-Infiltrating MDSCs
Authors: Tannenbaum Charles S. , Rayman Patricia A. , Pavicic Paul G. , Kim Jin Sub , Wei Wei , Polefko Alexandra , Wallace Wesley , Rini Brian I. , Morris-Stiff Gareth , Allende Daniela S. , Hamilton Thomas , Finke James H. , Diaz-Montero C. Marcela
Published: April 2023

H&E staining of CT26 and CT26IL1b
Supplementary Tables and Figures from Neutral Sphingomyelinase 2 Heightens Anti-Melanoma Immune Responses and Anti–PD-1 Therapy Efficacy
Authors: Montfort Anne , Bertrand Florie , Rochotte Julia , Gilhodes Julia , Filleron Thomas , Milhès Jean , Dufau Carine , Imbert Caroline , Riond Joëlle , Tosolini Marie , Clarke Christopher J. , Dufour Florent , Constantinescu Andrei A. , Junior Nilton De França , Garcia Virginie , Record Michel , Cordelier Pierre , Brousset Pierre , Rochaix Philippe , Silvente-Poirot Sandrine , Therville Nicole , Andrieu-Abadie Nathalie , Levade Thierry , Hannun Yusuf A. , Benoist Hervé , Meyer Nicolas , Micheau Olivier , Colacios Céline , Ségui Bruno
Published: April 2023

This file contains supplementary table 1 and supplementary figures 1-7.
Supplemental Table/Figure Legends from Immunologic Profiling of Mutational and Transcriptional Subgroups in Pediatric and Adult High-Grade Gliomas
Authors: Bockmayr Michael , Klauschen Frederick , Maire Cecile L. , Rutkowski Stefan , Westphal Manfred , Lamszus Katrin , Schüller Ulrich , Mohme Malte
Published: April 2023

Supplemental Table/Figure Legends
Supplementary Data File S1 from Neutral Sphingomyelinase 2 Heightens Anti-Melanoma Immune Responses and Anti–PD-1 Therapy Efficacy
Authors: Montfort Anne , Bertrand Florie , Rochotte Julia , Gilhodes Julia , Filleron Thomas , Milhès Jean , Dufau Carine , Imbert Caroline , Riond Joëlle , Tosolini Marie , Clarke Christopher J. , Dufour Florent , Constantinescu Andrei A. , Junior Nilton De França , Garcia Virginie , Record Michel , Cordelier Pierre , Brousset Pierre , Rochaix Philippe , Silvente-Poirot Sandrine , Therville Nicole , Andrieu-Abadie Nathalie , Levade Thierry , Hannun Yusuf A. , Benoist Hervé , Meyer Nicolas , Micheau Olivier , Colacios Céline , Ségui Bruno
Published: April 2023

TCGA dataset
Supplementary Tables from Changes in CT Radiomic Features Associated with Lymphocyte Distribution Predict Overall Survival and Response to Immunotherapy in Non–Small Cell Lung Cancer
Authors: Khorrami Mohammadhadi , Prasanna Prateek , Gupta Amit , Patil Pradnya , Velu Priya D. , Thawani Rajat , Corredor German , Alilou Mehdi , Bera Kaustav , Fu Pingfu , Feldman Michael , Velcheti Vamsidhar , Madabhushi Anant
Published: April 2023

Supplemental Tables
Supplementary Figures from Changes in CT Radiomic Features Associated with Lymphocyte Distribution Predict Overall Survival and Response to Immunotherapy in Non–Small Cell Lung Cancer
Authors: Khorrami Mohammadhadi , Prasanna Prateek , Gupta Amit , Patil Pradnya , Velu Priya D. , Thawani Rajat , Corredor German , Alilou Mehdi , Bera Kaustav , Fu Pingfu , Feldman Michael , Velcheti Vamsidhar , Madabhushi Anant
Published: April 2023

Supplemental Figures
Table S1 from CD86+ Antigen-Presenting B Cells Are Increased in Cancer, Localize in Tertiary Lymphoid Structures, and Induce Specific T-cell Responses
Authors: Wennhold Kerstin , Thelen Martin , Lehmann Jonas , Schran Simon , Preugszat Ella , Garcia-Marquez Maria , Lechner Axel , Shimabukuro-Vornhagen Alexander , Ercanoglu Meryem S. , Klein Florian , Thangarajah Fabinshy , Eidt Sebastian , Löser Heike , Bruns Christiane , Quaas Alexander , von Bergwelt-Baildon Michael , Schlößer Hans A.
Published: April 2023

Detailed list of used antibodies
Supplemental Figure Legends from Myeloid Cells Orchestrate Systemic Immunosuppression, Impairing the Efficacy of Immunotherapy against HPV+ Cancers
Authors: Galliverti Gabriele , Wullschleger Stephan , Tichet Mélanie , Murugan Dhaarini , Zangger Nadine , Horton Wesley , Korman Alan J. , Coussens Lisa M. , Swartz Melody A. , Hanahan Douglas
Published: April 2023

Supplemental Figure Legends
Supplementary Figures from An Improved Patient-Derived Xenograft Humanized Mouse Model for Evaluation of Lung Cancer Immune Responses
Authors: Meraz Ismail M. , Majidi Mourad , Meng Feng , Shao RuPing , Ha Min Jin , Neri Shinya , Fang Bingliang , Lin Steven H. , Tinkey Peggy T. , Shpall Elizabeth J. , Morris Jeffrey , Roth Jack A.
Published: April 2023

Figure S1-S7
Supplementary Figure Legends from An Improved Patient-Derived Xenograft Humanized Mouse Model for Evaluation of Lung Cancer Immune Responses
Authors: Meraz Ismail M. , Majidi Mourad , Meng Feng , Shao RuPing , Ha Min Jin , Neri Shinya , Fang Bingliang , Lin Steven H. , Tinkey Peggy T. , Shpall Elizabeth J. , Morris Jeffrey , Roth Jack A.
Published: April 2023

Legends to Figures S1-S7
Supplementary Fig 1 from Tumor Fusion Burden as a Hallmark of Immune Infiltration in Prostate Cancer
Authors: Wagle Marie-Claire , Castillo Joseph , Srinivasan Shrividhya , Holcomb Thomas , Yuen Kobe C. , Kadel Edward E. , Mariathasan Sanjeev , Halligan Daniel L. , Carr Adrian R. , Bylesjo Max , McAdam Paul R. , Lynagh Sarah , Marien Koen M. , Kockx Mark , Waumans Yannick , Huang Shih-Min A. , Lackner Mark R. , Mounir Zineb
Published: April 2023

TMB, TFB and CRPC scores across individual samples and disease stages and crosscorrelation analyses
Supplementary Table 3 from T Cells Expressing Receptor Recombination/Revision Machinery Are Detected in the Tumor Microenvironment and Expanded in Genomically Over-unstable Models
Authors: Morello Gaia , Cancila Valeria , La Rosa Massimo , Germano Giovanni , Lecis Daniele , Amodio Vito , Zanardi Federica , Iannelli Fabio , Greco Daniele , La Paglia Laura , Fiannaca Antonino , Urso Alfonso M. , Graziano Giulia , Ferrari Francesco , Pupa Serenella M. , Sangaletti Sabina , Chiodoni Claudia , Pruneri Giancarlo , Bardelli Alberto , Colombo Mario P. , Tripodo Claudio
Published: April 2023

Supplementary Table 3
Supplementary Table 1 from MHC Class II Antigen Presentation by Lymphatic Endothelial Cells in Tumors Promotes Intratumoral Regulatory T cell–Suppressive Functions
Authors: Gkountidi Anastasia O. , Garnier Laure , Dubrot Juan , Angelillo Julien , Harlé Guillaume , Brighouse Dale , Wrobel Ludovic J. , Pick Robert , Scheiermann Christoph , Swartz Melody A. , Hugues Stéphanie
Published: April 2023

Supplementary Table 1
Supplementary Figures 1-13 from T Cells Expressing Receptor Recombination/Revision Machinery Are Detected in the Tumor Microenvironment and Expanded in Genomically Over-unstable Models
Authors: Morello Gaia , Cancila Valeria , La Rosa Massimo , Germano Giovanni , Lecis Daniele , Amodio Vito , Zanardi Federica , Iannelli Fabio , Greco Daniele , La Paglia Laura , Fiannaca Antonino , Urso Alfonso M. , Graziano Giulia , Ferrari Francesco , Pupa Serenella M. , Sangaletti Sabina , Chiodoni Claudia , Pruneri Giancarlo , Bardelli Alberto , Colombo Mario P. , Tripodo Claudio
Published: April 2023

Supplementary Figures and Legends
Supplementary Figure and Table Legends from Arginase Therapy Combines Effectively with Immune Checkpoint Blockade or Agonist Anti-OX40 Immunotherapy to Control Tumor Growth
Authors: Badeaux Mark D. , Rolig Annah S. , Agnello Giulia , Enzler Danlee , Kasiewicz Melissa J. , Priddy Leslie , Wiggins Jason F. , Muir Alexander , Sullivan Mark R. , Van Cleef Jessica , Daige Christopher , Vander Heiden Matthew G. , Rajamanickam Venkatesh , Wooldridge James E. , Redmond William L. , Rowlinson Scott W.
Published: April 2023

Supplementary Figure and Table Legends
Supplementary Figure S6 from Mechanisms Driving Neutrophil-Induced T-cell Immunoparalysis in Ovarian Cancer
Authors: Emmons Tiffany R. , Giridharan Thejaswini , Singel Kelly L. , Khan ANM Nazmul H. , Ricciuti Jason , Howard Kaitlyn , Silva-Del Toro Stephanie L. , Debreceni Ivy L. , Aarts Cathelijn E.M. , Brouwer Mieke C. , Suzuki Sora , Kuijpers Taco W. , Jongerius Ilse , Allen Lee-Ann H. , Ferreira Viviana P. , Schubart Anna , Sellner Holger , Eder Jörg , Holland Steven M. , Ram Sanjay , Lederer James A. , Eng Kevin H. , Moysich Kirsten B. , Odunsi Kunle , Yaffe Michael B. , Zsiros Emese , Segal Brahm H.
Published: April 2023

Supplementary Figure S6: Evaluation of NFAT and NF-kB translocation, glucose uptake and phosphorylation of p70S6 kinase in CD4+ T cells.
Supplementary Figure S5 from Mechanisms Driving Neutrophil-Induced T-cell Immunoparalysis in Ovarian Cancer
Authors: Emmons Tiffany R. , Giridharan Thejaswini , Singel Kelly L. , Khan ANM Nazmul H. , Ricciuti Jason , Howard Kaitlyn , Silva-Del Toro Stephanie L. , Debreceni Ivy L. , Aarts Cathelijn E.M. , Brouwer Mieke C. , Suzuki Sora , Kuijpers Taco W. , Jongerius Ilse , Allen Lee-Ann H. , Ferreira Viviana P. , Schubart Anna , Sellner Holger , Eder Jörg , Holland Steven M. , Ram Sanjay , Lederer James A. , Eng Kevin H. , Moysich Kirsten B. , Odunsi Kunle , Yaffe Michael B. , Zsiros Emese , Segal Brahm H.
Published: April 2023

Supplementary Figure S5: Evaluation of neutrophil subpopulations after exposure to suppressor ASC with and without C3 inhibition or non-suppressor ASC.
Supplementary Figure S4 from Mechanisms Driving Neutrophil-Induced T-cell Immunoparalysis in Ovarian Cancer
Authors: Emmons Tiffany R. , Giridharan Thejaswini , Singel Kelly L. , Khan ANM Nazmul H. , Ricciuti Jason , Howard Kaitlyn , Silva-Del Toro Stephanie L. , Debreceni Ivy L. , Aarts Cathelijn E.M. , Brouwer Mieke C. , Suzuki Sora , Kuijpers Taco W. , Jongerius Ilse , Allen Lee-Ann H. , Ferreira Viviana P. , Schubart Anna , Sellner Holger , Eder Jörg , Holland Steven M. , Ram Sanjay , Lederer James A. , Eng Kevin H. , Moysich Kirsten B. , Odunsi Kunle , Yaffe Michael B. , Zsiros Emese , Segal Brahm H.
Published: April 2023

Supplementary Figure S4: Structure, binding affinity and in vitro potency of FB inhibitor.
Supplementary Table S3 from Chemotherapy Induces Tumor-Associated Macrophages that Aid Adaptive Immune Responses in Ovarian Cancer
Authors: Heath Owen , Berlato Chiara , Maniati Eleni , Lakhani Anissa , Pegrum Colin , Kotantaki Panoraia , Elorbany Samar , Böhm Steffen , Barry Simon T. , Annibaldi Alessandro , Barton Desmond P. , Balkwill Frances R.
Published: April 2023

List of GSEA canonical pathways and gene ontologies in TAMs post vs pre-chemotherapy
Supplementary Table S1 from Chemotherapy Induces Tumor-Associated Macrophages that Aid Adaptive Immune Responses in Ovarian Cancer
Authors: Heath Owen , Berlato Chiara , Maniati Eleni , Lakhani Anissa , Pegrum Colin , Kotantaki Panoraia , Elorbany Samar , Böhm Steffen , Barry Simon T. , Annibaldi Alessandro , Barton Desmond P. , Balkwill Frances R.
Published: April 2023

List of antibodies used in flow cytometry and sorting
Supplementary Figures from Chemotherapy Induces Tumor-Associated Macrophages that Aid Adaptive Immune Responses in Ovarian Cancer
Authors: Heath Owen , Berlato Chiara , Maniati Eleni , Lakhani Anissa , Pegrum Colin , Kotantaki Panoraia , Elorbany Samar , Böhm Steffen , Barry Simon T. , Annibaldi Alessandro , Barton Desmond P. , Balkwill Frances R.
Published: April 2023

Supplementary Figures 1-6 with legends.
Supplementary Tables and Figure Legends from Oncogenic KIT Modulates Type I IFN–Mediated Antitumor Immunity in GIST
Authors: Liu Mengyuan , Etherington Mark S. , Hanna Andrew , Medina Benjamin D. , Vitiello Gerardo A. , Bowler Timothy G. , Param Nesteene J. , Levin Lillian , Rossi Ferdinand , DeMatteo Ronald P.
Published: April 2023

Supplementary Tables 1-4 and Supplementary Figure Legends
Figure S4 from Oncogenic KIT Modulates Type I IFN–Mediated Antitumor Immunity in GIST
Authors: Liu Mengyuan , Etherington Mark S. , Hanna Andrew , Medina Benjamin D. , Vitiello Gerardo A. , Bowler Timothy G. , Param Nesteene J. , Levin Lillian , Rossi Ferdinand , DeMatteo Ronald P.
Published: April 2023

Supp to Fig. 4
Figure S3 from Oncogenic KIT Modulates Type I IFN–Mediated Antitumor Immunity in GIST
Authors: Liu Mengyuan , Etherington Mark S. , Hanna Andrew , Medina Benjamin D. , Vitiello Gerardo A. , Bowler Timothy G. , Param Nesteene J. , Levin Lillian , Rossi Ferdinand , DeMatteo Ronald P.
Published: April 2023

Supp to Fig. 3
Figure S2 from Oncogenic KIT Modulates Type I IFN–Mediated Antitumor Immunity in GIST
Authors: Liu Mengyuan , Etherington Mark S. , Hanna Andrew , Medina Benjamin D. , Vitiello Gerardo A. , Bowler Timothy G. , Param Nesteene J. , Levin Lillian , Rossi Ferdinand , DeMatteo Ronald P.
Published: April 2023

Supp to Fig. 2
Figure S1 from Oncogenic KIT Modulates Type I IFN–Mediated Antitumor Immunity in GIST
Authors: Liu Mengyuan , Etherington Mark S. , Hanna Andrew , Medina Benjamin D. , Vitiello Gerardo A. , Bowler Timothy G. , Param Nesteene J. , Levin Lillian , Rossi Ferdinand , DeMatteo Ronald P.
Published: April 2023

Supp to Fig. 1
Supplementary Figures 1-10 from Enhancing the Generation of Eomeshi CD8+ T Cells Augments the Efficacy of OX40- and CTLA-4–Targeted Immunotherapy
Authors: Emerson Dana A. , Rolig Annah S. , Redmond William L.
Published: April 2023

Supplemental Figures
Supplementary Figure Legends from Enhancing the Generation of Eomeshi CD8+ T Cells Augments the Efficacy of OX40- and CTLA-4–Targeted Immunotherapy
Authors: Emerson Dana A. , Rolig Annah S. , Redmond William L.
Published: April 2023

Legends for Supplementary Figures 1-10
Figure S1, Figure S2, Table S1 from Regulatory T-cell Transcriptomic Reprogramming Characterizes Adverse Events by Checkpoint Inhibitors in Solid Tumors
Authors: Grigoriou Maria , Banos Aggelos , Hatzioannou Aikaterini , Kloetgen Andreas , Kouzis Panagiotis , Aggouraki Despoina , Zakopoulou Roubini , Bamias Giorgos , Kassi Eva , Mavroudis Dimitrios , Bamias Aristotelis , Boumpas Dimitrios T. , Tsirigos Aristotelis , Gogas Helen , Alissafi Themis , Verginis Panayotis
Published: April 2023

Supplementary Figures & Table
Supplementary Figures and Tables from CD4+ T-cell Immunity in the Peripheral Blood Correlates with Response to Anti-PD-1 Therapy
Authors: Kagamu Hiroshi , Kitano Shigehisa , Yamaguchi Ou , Yoshimura Kenichi , Horimoto Katsuhisa , Kitazawa Masashi , Fukui Kazuhiko , Shiono Ayako , Mouri Atsuhito , Nishihara Fuyumi , Miura Yu , Hashimoto Kosuke , Murayama Yoshitake , Kaira Kyoichi , Kobayashi Kunihiko
Published: April 2023

Supplementary Figures and Tables
Supplemental Figures and Tables from The IKZF1–IRF4/IRF5 Axis Controls Polarization of Myeloma-Associated Macrophages
Authors: Mougiakakos Dimitrios , Bach Christian , Böttcher Martin , Beier Fabian , Röhner Linda , Stoll Andrej , Rehli Michael , Gebhard Claudia , Lischer Christopher , Eberhardt Martin , Vera Julio , Büttner-Herold Maike , Bitterer Katrin , Balzer Heidi , Leffler Magdalena , Jitschin Simon , Hundemer Michael , Awwad Mohamed H.S. , Busch Martin , Stenger Steffen , Völkl Simon , Schütz Christian , Krönke Jan , Mackensen Andreas , Bruns Heiko
Published: April 2023

Supplemental Figures 1-24 and Tables 1-3
Table S1 from Single-Cell Immune Competency Signatures Associate with Survival in Phase II GVAX and CRS-207 Randomized Studies in Patients with Metastatic Pancreatic Cancer
Authors: Nair Nitya , Chen Shih-Yu , Lemmens Ed , Chang Serena , Le Dung T. , Jaffee Elizabeth M. , Murphy Aimee , Whiting Chan , Müller Thomas , Brockstedt Dirk G.
Published: April 2023

Metal-tagged antibody panel used for mass cytometry analysis and fluorescence-tagged antibody panels used for flow cytometry analysis in training and verification sets