bluuebunny/crossref_metadata_2025 huggingface dataset:
Supplementary Table 2 from Phosphoproteomics Identifies Driver Tyrosine Kinases in Sarcoma Cell Lines and Tumors
Authors: Bai Yun , Li Jiannong , Fang Bin , Edwards Arthur , Zhang Guolin , Bui Marilyn , Eschrich Steven , Altiok Soner , Koomen John , Haura Eric B.
Published: March 2023

XLS file - 947K, Raw data of phosphoproteomics experiments in sarcoma cell lines and tissues
Supplementary Table 1 from Phosphoproteomics Identifies Driver Tyrosine Kinases in Sarcoma Cell Lines and Tumors
Authors: Bai Yun , Li Jiannong , Fang Bin , Edwards Arthur , Zhang Guolin , Bui Marilyn , Eschrich Steven , Altiok Soner , Koomen John , Haura Eric B.
Published: March 2023

PDF file - 446K, Proteins with phosphorylation tyrosine sites identified by phosphoproteomics approach in sarcoma cell lines
Supplementary Figure 1 from Targeting Quiescent Tumor Cells via Oxygen and IGF-I Supplementation
Authors: Kyle Alastair H. , Baker Jennifer H.E. , Minchinton Andrew I.
Published: March 2023

PDF file - 157K
Supplementary Figure 2 from Expression of the PTTG1 Oncogene Is Associated with Aggressive Clear Cell Renal Cell Carcinoma
Authors: Wondergem Bill , Zhang Zhongfa , Huang Dachuan , Ong Choon Kiat , Koeman Julie , Hof David Van't , Petillo David , Ooi Aikseng , Anema John , Lane Brian , Kahnoski Richard J. , Furge Kyle A. , Teh Bin Tean
Published: March 2023

PDF file, 646K, Supplemental Figure S2. (a) SiRNA targeting PTTG1 achieved complete suppression of PTTG1 expression for at least 72 hours. (b) Immunofluorescent staining revealed abundant nuclear and cytoplasmic localization of PTTG1 in 786-O cells and suppression of PTTG1 expression upon treatment with targeted siRNA. (c) A 2-dimensional colony formation assay demonstrated that PTTG1 knockdown had little effect on anchorage-dependent growth rate. Crystal violet staining and microscopic imaging of these colonies further revealed that 786-O cells exhibit no major morphological differences following PTTG1 knockdown.
Supplementary Table 3C from Kidney Tumor Biomarkers Revealed by Simultaneous Multiple Matrix Metabolomics Analysis
Authors: Ganti Sheila , Taylor Sandra L. , Abu Aboud Omran , Yang Joy , Evans Christopher , Osier Michael V. , Alexander Danny C. , Kim Kyoungmi , Weiss Robert H.
Published: March 2023

XLS file - 29K, All identified metabolites in urine
Supplementary Figure 3 from DEDD Interacts with PI3KC3 to Activate Autophagy and Attenuate Epithelial–Mesenchymal Transition in Human Breast Cancer
Authors: Lv Qi , Wang Wei , Xue Jianfei , Hua Fang , Mu Rong , Lin Heng , Yan Jun , Lv Xiaoxi , Chen Xiaoguang , Hu Zhuo-Wei
Published: March 2023

PDF file - 180K, Silencing of DEDD induces EMT and promotes the degradation of PI3KIIIC in SW480 cells
Supplementary Table 2 from Kidney Tumor Biomarkers Revealed by Simultaneous Multiple Matrix Metabolomics Analysis
Authors: Ganti Sheila , Taylor Sandra L. , Abu Aboud Omran , Yang Joy , Evans Christopher , Osier Michael V. , Alexander Danny C. , Kim Kyoungmi , Weiss Robert H.
Published: March 2023

PDF file - 47K, R2 and Q2 values of the first 3 latent components for distinguishing cancer and sham surgery mice based on the metabolome in the tissue, serum and urine
Supplementary Table 1 from Kidney Tumor Biomarkers Revealed by Simultaneous Multiple Matrix Metabolomics Analysis
Authors: Ganti Sheila , Taylor Sandra L. , Abu Aboud Omran , Yang Joy , Evans Christopher , Osier Michael V. , Alexander Danny C. , Kim Kyoungmi , Weiss Robert H.
Published: March 2023

PDF file - 24K, averaged tumor + kidney weights at sacrifice for each animal
Supplementary Methods, Figure Legends 1-4, Table Legends 1-2 from Kidney Tumor Biomarkers Revealed by Simultaneous Multiple Matrix Metabolomics Analysis
Authors: Ganti Sheila , Taylor Sandra L. , Abu Aboud Omran , Yang Joy , Evans Christopher , Osier Michael V. , Alexander Danny C. , Kim Kyoungmi , Weiss Robert H.
Published: March 2023

PDF file - 74K, Summary of all Supplemental data and Detailed methods: Non-targeted metabolomic analysis part of Supplemental Data
Supplementary Methods, Figure Legends 1-4 from AMPK Promotes p53 Acetylation via Phosphorylation and Inactivation of SIRT1 in Liver Cancer Cells
Authors: Lee Chi-Wai , Wong Leo Lap-Yan , Tse Edith Yuk-Ting , Liu Heong-Fai , Leong Veronica Yee-Law , Lee Joyce Man-Fong , Hardie D. Grahame , Ng Irene Oi-Lin , Ching Yick-Pang
Published: March 2023

PDF file - 105K
Supplementary Figure 5 from ATR–ATRIP Kinase Complex Triggers Activation of the Fanconi Anemia DNA Repair Pathway
Authors: Shigechi Tomoko , Tomida Junya , Sato Koichi , Kobayashi Masahiko , Eykelenboom John K. , Pessina Fabio , Zhang Yanbin , Uchida Emi , Ishiai Masamichi , Lowndes Noel F. , Yamamoto Kenichi , Kurumizaka Hitoshi , Maehara Yoshihiko , Takata Minoru
Published: March 2023

PDF file - 1.2MB
Supplementary Figure 4 from ATR–ATRIP Kinase Complex Triggers Activation of the Fanconi Anemia DNA Repair Pathway
Authors: Shigechi Tomoko , Tomida Junya , Sato Koichi , Kobayashi Masahiko , Eykelenboom John K. , Pessina Fabio , Zhang Yanbin , Uchida Emi , Ishiai Masamichi , Lowndes Noel F. , Yamamoto Kenichi , Kurumizaka Hitoshi , Maehara Yoshihiko , Takata Minoru
Published: March 2023

PDF file - 1MB
Supplementary Figure 2 from AMPK Promotes p53 Acetylation via Phosphorylation and Inactivation of SIRT1 in Liver Cancer Cells
Authors: Lee Chi-Wai , Wong Leo Lap-Yan , Tse Edith Yuk-Ting , Liu Heong-Fai , Leong Veronica Yee-Law , Lee Joyce Man-Fong , Hardie D. Grahame , Ng Irene Oi-Lin , Ching Yick-Pang
Published: March 2023

PDF file - 431K, AMPK activator inhibited HepG2 cell growth
Supplementary Figure 3 from ATR–ATRIP Kinase Complex Triggers Activation of the Fanconi Anemia DNA Repair Pathway
Authors: Shigechi Tomoko , Tomida Junya , Sato Koichi , Kobayashi Masahiko , Eykelenboom John K. , Pessina Fabio , Zhang Yanbin , Uchida Emi , Ishiai Masamichi , Lowndes Noel F. , Yamamoto Kenichi , Kurumizaka Hitoshi , Maehara Yoshihiko , Takata Minoru
Published: March 2023

PDF file - 1.6MB
Supplementary Figure 1 from AMPK Promotes p53 Acetylation via Phosphorylation and Inactivation of SIRT1 in Liver Cancer Cells
Authors: Lee Chi-Wai , Wong Leo Lap-Yan , Tse Edith Yuk-Ting , Liu Heong-Fai , Leong Veronica Yee-Law , Lee Joyce Man-Fong , Hardie D. Grahame , Ng Irene Oi-Lin , Ching Yick-Pang
Published: March 2023

PDF file - 28K, Underexpression of AMPK-lowercase alpha2 protein in HCC samples
Supplementary Methods, Figures 1-9 from Vanilloid Receptor-1 Regulates Neurogenic Inflammation in Colon and Protects Mice from Colon Cancer
Authors: Vinuesa Amaya G. , Sancho Rocío , García-Limones Carmen , Behrens Axel , ten Dijke Peter , Calzado Marco A. , Muñoz Eduardo
Published: March 2023

PDF file - 2.5MB
Supplementary Figure 3 from Accumulation of Multipotent Progenitors with a Basal Differentiation Bias during Aging of Human Mammary Epithelia
Authors: Garbe James C. , Pepin Francois , Pelissier Fanny A. , Sputova Klara , Fridriksdottir Agla J. , Guo Diana E. , Villadsen Rene , Park Morag , Petersen Ole W. , Borowsky Alexander D. , Stampfer Martha R. , LaBarge Mark A.
Published: March 2023

PDF file - 2.3MB, Lineage marker distributions in cultured and uncultured HMEC. Sevenparameter flow cytometry analyses of 4th passage HMEC strains
Supplementary Methods from Cell-Mediated Autophagy Promotes Cancer Cell Survival
Authors: Buchser William J. , Laskow Thomas C. , Pavlik Philip J. , Lin Hui-Min , Lotze Michael T.
Published: March 2023

PDF file - 87K, A more detailed section on Staining, Imaging, and Analysis
Supplementary Figures 1-13 from Cell-Mediated Autophagy Promotes Cancer Cell Survival
Authors: Buchser William J. , Laskow Thomas C. , Pavlik Philip J. , Lin Hui-Min , Lotze Michael T.
Published: March 2023

PDF file - 1.2MB, 1) cell population discrimination and lysis, 2) CD4 T-cell C-MA, 3) ATG5 KO, 4) Prolonged survival, 5) Caspase and Granzyme inhibitors, 6) Bafilomycin and LAMP1, 7) Imaging starvation and HCQ, 8) TGF-beta, 9)NKG2D ligands, 10) KIR inhibition, 11) STAT1,2 translocation and IFNGR1, 12) IFN alpha combinations, 13) Chemotherapy.
Supplementary Figure 3 from FLT-PET Is Superior to FDG-PET for Very Early Response Prediction in NPM-ALK-Positive Lymphoma Treated with Targeted Therapy
Authors: Li Zhoulei , Graf Nicolas , Herrmann Ken , Jünger Alexandra , Aichler Michaela , Feuchtinger Annette , Baumgart Anja , Walch Axel , Peschel Christian , Schwaiger Markus , Buck Andreas , Keller Ulrich , Dechow Tobias
Published: March 2023

PDF file - 96K, FLT uptake is a measure for nonresponse to HSP90 inhibition in NPM-ALK+ overexpressing lymphoma cells in vitro
Supplementary Figure 6 from BRAF Inhibitor Vemurafenib Improves the Antitumor Activity of Adoptive Cell Immunotherapy
Authors: Koya Richard C. , Mok Stephen , Otte Nicholas , Blacketor Kevin J. , Comin-Anduix Begonya , Tumeh Paul C. , Minasyan Aspram , Graham Nicholas A. , Graeber Thomas G. , Chodon Thinle , Ribas Antoni
Published: March 2023

PDF file - 45K, Gating strategy for the studies of intracellular interferon gamma (IFN-�) production by tumor infiltrating lymphocytes (TIL) with or without in vivo treatment with vemurafenib
Supplementary Figure 1 from Clusterin Mediates TGF-β–Induced Epithelial–Mesenchymal Transition and Metastasis via Twist1 in Prostate Cancer Cells
Authors: Shiota Masaki , Zardan Anousheh , Takeuchi Ario , Kumano Masafumi , Beraldi Eliana , Naito Seiji , Zoubeidi Amina , Gleave Martin E.
Published: March 2023

PDF file - 90K, Slug and Snail don't affect CLU expression. A. PC-3 cells were transfected with 40 nmol/L of the indicated siRNA. At 72 h after transfection, quantitative RT-PCR was performed using the primers and probes for CLU and GAPDH. Each transcript level from cells transfected with control siRNA was set as 1. Boxes, mean; bars, �s.d. B. PC-3 cells were transfected with 40 nmol/L of the indicated siRNA. At 72 h after transfection, whole-cell extracts were analyzed by SDS-PAGE and western blot analysis with specific antibodies
Supplementary Figure 2 from BRAF Inhibitor Vemurafenib Improves the Antitumor Activity of Adoptive Cell Immunotherapy
Authors: Koya Richard C. , Mok Stephen , Otte Nicholas , Blacketor Kevin J. , Comin-Anduix Begonya , Tumeh Paul C. , Minasyan Aspram , Graham Nicholas A. , Graeber Thomas G. , Chodon Thinle , Ribas Antoni
Published: March 2023

PDF file - 190K, Flow cytometric analysis of H2-Db expression by SM1 with or without exposure to vemurafenib for different periods
Supplementary Table 1 from Collaboration of Kras and Androgen Receptor Signaling Stimulates EZH2 Expression and Tumor-Propagating Cells in Prostate Cancer
Authors: Cai Houjian , Memarzadeh Sanaz , Stoyanova Tanya , Beharry Zanna , Kraft Andrew S. , Witte Owen N.
Published: March 2023

PDF file, 28K, Distinctive features of three tumors derived from mutual synergy of over-expression of AR and activation of Kras and Akt signaling pathways.
Supplementary Methods from Collaboration of Kras and Androgen Receptor Signaling Stimulates EZH2 Expression and Tumor-Propagating Cells in Prostate Cancer
Authors: Cai Houjian , Memarzadeh Sanaz , Stoyanova Tanya , Beharry Zanna , Kraft Andrew S. , Witte Owen N.
Published: March 2023

PDF file, 28K, Includes information on mice strains, plasmids, as well as immunohistochemistry and western blot analysis.
Supplementary Figure 5 from Collaboration of Kras and Androgen Receptor Signaling Stimulates EZH2 Expression and Tumor-Propagating Cells in Prostate Cancer
Authors: Cai Houjian , Memarzadeh Sanaz , Stoyanova Tanya , Beharry Zanna , Kraft Andrew S. , Witte Owen N.
Published: March 2023

PDF file, 83K, Dividing prostate spheres in Kras(G12D)+AR transduced cells.
Supplementary Figure 4 from Collaboration of Kras and Androgen Receptor Signaling Stimulates EZH2 Expression and Tumor-Propagating Cells in Prostate Cancer
Authors: Cai Houjian , Memarzadeh Sanaz , Stoyanova Tanya , Beharry Zanna , Kraft Andrew S. , Witte Owen N.
Published: March 2023

PDF file, 152K, Synergy of Kras(G12D) and AR in generating advanced prostate tumors from FACS sorted primary cells.
Supplementary Table 1 from Identification of an Epigenetic Profile Classifier That Is Associated with Survival in Head and Neck Cancer
Authors: Poage Graham M. , Butler Rondi A. , Houseman E. Andrés , McClean Michael D. , Nelson Heather H. , Christensen Brock C. , Marsit Carmen J. , Kelsey Karl T.
Published: March 2023

PDF file - 5K, Primers Used In Pyrosequencing Validation
Supplementary Figure 5 from Identification of an Epigenetic Profile Classifier That Is Associated with Survival in Head and Neck Cancer
Authors: Poage Graham M. , Butler Rondi A. , Houseman E. Andrés , McClean Michael D. , Nelson Heather H. , Christensen Brock C. , Marsit Carmen J. , Kelsey Karl T.
Published: March 2023

PDF file - 95K, Specificity analysis for survival association with neighboring gene-locus methylation
Supplementary Figure 1 from Collaboration of Kras and Androgen Receptor Signaling Stimulates EZH2 Expression and Tumor-Propagating Cells in Prostate Cancer
Authors: Cai Houjian , Memarzadeh Sanaz , Stoyanova Tanya , Beharry Zanna , Kraft Andrew S. , Witte Owen N.
Published: March 2023

PDF file, 213K, Synergy of Akt signaling with AR promotes the progression of prostate cancer.
Supplementary Table 1, Figure 1 from Histone Deacetylase Inhibition Increases Levels of Choline Kinase α and Phosphocholine Facilitating Noninvasive Imaging in Human Cancers
Authors: Beloueche-Babari Mounia , Arunan Vaitha , Troy Helen , te Poele Robert H. , Te Fong Anne-Christine Wong , Jackson L. Elizabeth , Payne Geoffrey S. , Griffiths John R. , Judson Ian R. , Workman Paul , Leach Martin O. , Chung Yuen-Li
Published: March 2023

PDF file - 94K
Supplementary Figure 5 from Resistance to Selective BRAF Inhibition Can Be Mediated by Modest Upstream Pathway Activation
Authors: Su Fei , Bradley William D. , Wang Qiongqing , Yang Hong , Xu Lizhong , Higgins Brian , Kolinsky Kenneth , Packman Kathryn , Kim Min Jung , Trunzer Kerstin , Lee Richard J. , Schostack Kathleen , Carter Jade , Albert Thomas , Germer Soren , Rosinski Jim , Martin Mitchell , Simcox Mary Ellen , Lestini Brian , Heimbrook David , Bollag Gideon
Published: March 2023

PDF file - 168K
Supplementary Figure Legends 1-3 from Targeting eNOS in Pancreatic Cancer
Authors: Lampson Benjamin L. , Kendall S. DiSean , Ancrile Brooke B. , Morrison Meghan M. , Shealy Michael J. , Barrientos Katharine S. , Crowe Matthew S. , Kashatus David F. , White Rebekah R. , Gurley Susan B. , Cardona Diana M. , Counter Christopher M.
Published: March 2023

PDF file - 57K
Supplementary Figure 4 from Resistance to Selective BRAF Inhibition Can Be Mediated by Modest Upstream Pathway Activation
Authors: Su Fei , Bradley William D. , Wang Qiongqing , Yang Hong , Xu Lizhong , Higgins Brian , Kolinsky Kenneth , Packman Kathryn , Kim Min Jung , Trunzer Kerstin , Lee Richard J. , Schostack Kathleen , Carter Jade , Albert Thomas , Germer Soren , Rosinski Jim , Martin Mitchell , Simcox Mary Ellen , Lestini Brian , Heimbrook David , Bollag Gideon
Published: March 2023

PDF file - 89K
Supplementary Figure 3 from Resistance to Selective BRAF Inhibition Can Be Mediated by Modest Upstream Pathway Activation
Authors: Su Fei , Bradley William D. , Wang Qiongqing , Yang Hong , Xu Lizhong , Higgins Brian , Kolinsky Kenneth , Packman Kathryn , Kim Min Jung , Trunzer Kerstin , Lee Richard J. , Schostack Kathleen , Carter Jade , Albert Thomas , Germer Soren , Rosinski Jim , Martin Mitchell , Simcox Mary Ellen , Lestini Brian , Heimbrook David , Bollag Gideon
Published: March 2023

PDF file - 235K
Supplementary Table 6 from Dual Targeting of the Akt/mTOR Signaling Pathway Inhibits Castration-Resistant Prostate Cancer in a Genetically Engineered Mouse Model
Authors: Floc'h Nicolas , Kinkade Carolyn Waugh , Kobayashi Takashi , Aytes Alvaro , Lefebvre Celine , Mitrofanova Antonina , Cardiff Robert D. , Califano Andrea , Shen Michael M. , Abate-Shen Cory
Published: March 2023

DOC file, 296K, GSEA data for the intact mice.
Supplementary Table 1 from VEGF Exerts an Angiogenesis-Independent Function in Cancer Cells to Promote Their Malignant Progression
Authors: Cao Ying , E Guangqi , Wang Enfeng , Pal Krishnendu , Dutta Shamit K. , Bar-Sagi Dafna , Mukhopadhyay Debabrata
Published: March 2023

PDF file - 111K, Targeting sequences of siRNA and shRNA
Supplementary Table 5 from Dual Targeting of the Akt/mTOR Signaling Pathway Inhibits Castration-Resistant Prostate Cancer in a Genetically Engineered Mouse Model
Authors: Floc'h Nicolas , Kinkade Carolyn Waugh , Kobayashi Takashi , Aytes Alvaro , Lefebvre Celine , Mitrofanova Antonina , Cardiff Robert D. , Califano Andrea , Shen Michael M. , Abate-Shen Cory
Published: March 2023

XLS file, 240K, Differentially expressed gene set data for the castrated mice.
Supplementary Table 6 from ESE3/EHF Controls Epithelial Cell Differentiation and Its Loss Leads to Prostate Tumors with Mesenchymal and Stem-like Features
Authors: Albino Domenico , Longoni Nicole , Curti Laura , Mello-Grand Maurizia , Pinton Sandra , Civenni Gianluca , Thalmann George , D'Ambrosio Gioacchino , Sarti Manuela , Sessa Fausto , Chiorino Giovanna , Catapano Carlo V. , Carbone Giuseppina M.
Published: March 2023

XLS file - 168K, Genes up- and down- regulated in ESE3low tumors compared to all tumors (Q<0.05)
Supplementary Table 3 from ESE3/EHF Controls Epithelial Cell Differentiation and Its Loss Leads to Prostate Tumors with Mesenchymal and Stem-like Features
Authors: Albino Domenico , Longoni Nicole , Curti Laura , Mello-Grand Maurizia , Pinton Sandra , Civenni Gianluca , Thalmann George , D'Ambrosio Gioacchino , Sarti Manuela , Sessa Fausto , Chiorino Giovanna , Catapano Carlo V. , Carbone Giuseppina M.
Published: March 2023

PDF file - 7K, Identification of ETS binding site on the promoter of putative ESE3 target genes
Supplementary Tables 1-3 from MET Signaling Regulates Glioblastoma Stem Cells
Authors: Joo Kyeung Min , Jin Juyoun , Kim Eunhee , Ho Kim Kang , Kim Yonghyun , Gu Kang Bong , Kang Youn-Jung , Lathia Justin D. , Ho Cheong Kwang , Song Paul H. , Kim Hyunggee , Seol Ho Jun , Kong Doo-Sik , Lee Jung-Il , Rich Jeremy N. , Lee Jeongwu , Nam Do-Hyun
Published: March 2023

PDF file - 292K, Table S1 shows FACS analysis results of MET, CD133, and CD15 in the freshly isolated patient GBM cells, and Table S2 describes the list of patient-derived GBM cells and their derivatives used in this study. Patient information of 14 matched pre- and postradiated GBM specimens is shown in Table S3
Supplementary Figure 4 from Augmentation of Therapeutic Responses in Melanoma by Inhibition of IRAK-1,-4
Authors: Srivastava Ratika , Geng Degui , Liu Yingjia , Zheng Liqin , Li Zhaoyang , Joseph Mary Ann , McKenna Colleen , Bansal Navneeta , Ochoa Augusto , Davila Eduardo
Published: March 2023

PDF file - 66K, Apoptosis-related gene transcription array of A375 melanoma cells following IRAK inhibition with or without vinblastine
Supplementary Figure 3 from An NMR Metabolomics Approach for the Diagnosis of Leptomeningeal Carcinomatosis
Authors: Cho Hye Rim , Wen He , Ryu Young Jin , An Yong Jin , Kim Hyo Cheol , Moon Woo Kyung , Han Moon Hee , Park Sunghyouk , Choi Seung Hong
Published: March 2023

PDF file - 130K, Representative HR-MAS spectra of CSF with full scale lactate peak
Supplementary Figure 1 from An NMR Metabolomics Approach for the Diagnosis of Leptomeningeal Carcinomatosis
Authors: Cho Hye Rim , Wen He , Ryu Young Jin , An Yong Jin , Kim Hyo Cheol , Moon Woo Kyung , Han Moon Hee , Park Sunghyouk , Choi Seung Hong
Published: March 2023

PDF file - 360K, Isolation of glioma cells expressing GFP
Supplementary Figure 1 from Augmentation of Therapeutic Responses in Melanoma by Inhibition of IRAK-1,-4
Authors: Srivastava Ratika , Geng Degui , Liu Yingjia , Zheng Liqin , Li Zhaoyang , Joseph Mary Ann , McKenna Colleen , Bansal Navneeta , Ochoa Augusto , Davila Eduardo
Published: March 2023

PDF file - 77K, Overexpressing IRAK-1 in melanoma cells augments the expression of various cytokines and chemokines
Supplementary Figure Legends 1-6 from Smac Mimetic LBW242 Sensitizes XIAP-Overexpressing Neuroblastoma Cells for TNF-α–Independent Apoptosis
Authors: Eschenburg Georg , Eggert Angelika , Schramm Alexander , Lode Holger N. , Hundsdoerfer Patrick
Published: March 2023

PDF file - 31K
Supplementary Figure 2 from Loss of Rassf1a Synergizes with Deregulated Runx2 Signaling in Tumorigenesis
Authors: van der Weyden Louise , Papaspyropoulos Angelos , Poulogiannis George , Rust Alistair G. , Rashid Mamunur , Adams David J. , Arends Mark J. , O'Neill Eric
Published: March 2023

PDF file - 120K, A. U2OS cells were transfected vector control or plasmid expressing FLAG-YAP1 and indicated siRNAs before colonies were allowed to grow for 11 days, fixed and visualized with crystal violet. Whole cell lysates were probed with indicated antibodies. Error bars indicate SEM of n=3. B. U2OS cells were transfected with indicated siRNAs, as shown in A, and cell viability was determined using the resazurin assay after 72 hrs. Error bars indicate SEM of at least n=4
Supplementary Figure 4 from Smac Mimetic LBW242 Sensitizes XIAP-Overexpressing Neuroblastoma Cells for TNF-α–Independent Apoptosis
Authors: Eschenburg Georg , Eggert Angelika , Schramm Alexander , Lode Holger N. , Hundsdoerfer Patrick
Published: March 2023

PDF file - 2.6MB, Effects of LBW242 or XIAP silencing on apoptosis induction and caspase activation in SH-EP neuroblastoma cells.
Supplementary Tables 1-7 from ARN-509: A Novel Antiandrogen for Prostate Cancer Treatment
Authors: Clegg Nicola J. , Wongvipat John , Joseph James D. , Tran Chris , Ouk Samedy , Dilhas Anna , Chen Yu , Grillot Kate , Bischoff Eric D. , Cai Ling , Aparicio Anna , Dorow Steven , Arora Vivek , Shao Gang , Qian Jing , Zhao Hong , Yang Guangbin , Cao Chunyan , Sensintaffar John , Wasielewska Teresa , Herbert Mark R. , Bonnefous Celine , Darimont Beatrice , Scher Howard I. , Smith-Jones Peter , Klang Mark , Smith Nicholas D. , De Stanchina Elisa , Wu Nian , Ouerfelli Ouathek , Rix Peter J. , Heyman Richard A. , Jung Michael E. , Sawyers Charles L. , Hager Jeffrey H.
Published: March 2023

PDF file - 151K
Supplementary Figure 4 from Acyclic Retinoid Targets Platelet-Derived Growth Factor Signaling in the Prevention of Hepatic Fibrosis and Hepatocellular Carcinoma Development
Authors: Okada Hikari , Honda Masao , Campbell Jean S. , Sakai Yoshio , Yamashita Taro , Takebuchi Yuuki , Hada Kazuhiro , Shirasaki Takayoshi , Takabatake Riuta , Nakamura Mikiko , Sunagozaka Hajime , Tanaka Takuji , Fausto Nelson , Kaneko Shuichi
Published: March 2023

PDF file - 1.5MB, Pathway analysis of differentially expressed genes using MetaCore (GeneGo). Functional ontology enrichment analysis was performed to find differentially expressed pathway using 538 differentially expressed genes in cluster A, B, and C.
Supplementary Figure 4 from ARN-509: A Novel Antiandrogen for Prostate Cancer Treatment
Authors: Clegg Nicola J. , Wongvipat John , Joseph James D. , Tran Chris , Ouk Samedy , Dilhas Anna , Chen Yu , Grillot Kate , Bischoff Eric D. , Cai Ling , Aparicio Anna , Dorow Steven , Arora Vivek , Shao Gang , Qian Jing , Zhao Hong , Yang Guangbin , Cao Chunyan , Sensintaffar John , Wasielewska Teresa , Herbert Mark R. , Bonnefous Celine , Darimont Beatrice , Scher Howard I. , Smith-Jones Peter , Klang Mark , Smith Nicholas D. , De Stanchina Elisa , Wu Nian , Ouerfelli Ouathek , Rix Peter J. , Heyman Richard A. , Jung Michael E. , Sawyers Charles L. , Hager Jeffrey H.
Published: March 2023

PDF file - 185K
Supplementary Figure 2 from Acyclic Retinoid Targets Platelet-Derived Growth Factor Signaling in the Prevention of Hepatic Fibrosis and Hepatocellular Carcinoma Development
Authors: Okada Hikari , Honda Masao , Campbell Jean S. , Sakai Yoshio , Yamashita Taro , Takebuchi Yuuki , Hada Kazuhiro , Shirasaki Takayoshi , Takabatake Riuta , Nakamura Mikiko , Sunagozaka Hajime , Tanaka Takuji , Fausto Nelson , Kaneko Shuichi
Published: March 2023

PDF file - 3.4MB, Histological assessment of hepatic adenoma, HCC and non-tumor regions of Pdgf-c Tg and WT mouse livers fed with different diets.
Supplementary Methods, Figures 1-3 from BCL2 Suppresses PARP1 Function and Nonapoptotic Cell Death
Authors: Dutta Chaitali , Day Tovah , Kopp Nadja , van Bodegom Diederik , Davids Matthew S. , Ryan Jeremy , Bird Liat , Kommajosyula Naveen , Weigert Oliver , Yoda Akinori , Fung Hua , Brown Jennifer R. , Shapiro Geoffrey I. , Letai Anthony , Weinstock David M.
Published: March 2023

PDF file - 108K
Supplementary Table 6 from Novel Theranostic Opportunities Offered by Characterization of Altered Membrane Lipid Metabolism in Breast Cancer Progression
Authors: Hilvo Mika , Denkert Carsten , Lehtinen Laura , Müller Berit , Brockmöller Scarlet , Seppänen-Laakso Tuulikki , Budczies Jan , Bucher Elmar , Yetukuri Laxman , Castillo Sandra , Berg Emilia , Nygren Heli , Sysi-Aho Marko , Griffin Julian L. , Fiehn Oliver , Loibl Sibylle , Richter-Ehrenstein Christiane , Radke Cornelia , Hyötyläinen Tuulia , Kallioniemi Olli , Iljin Kristiina , Orešič Matej
Published: March 2023

Supplementary Table 6 from Novel Theranostic Opportunities Offered by Characterization of Altered Membrane Lipid Metabolism in Breast Cancer Progression
Supplementary Table 5 from Novel Theranostic Opportunities Offered by Characterization of Altered Membrane Lipid Metabolism in Breast Cancer Progression
Authors: Hilvo Mika , Denkert Carsten , Lehtinen Laura , Müller Berit , Brockmöller Scarlet , Seppänen-Laakso Tuulikki , Budczies Jan , Bucher Elmar , Yetukuri Laxman , Castillo Sandra , Berg Emilia , Nygren Heli , Sysi-Aho Marko , Griffin Julian L. , Fiehn Oliver , Loibl Sibylle , Richter-Ehrenstein Christiane , Radke Cornelia , Hyötyläinen Tuulia , Kallioniemi Olli , Iljin Kristiina , Orešič Matej
Published: March 2023

Supplementary Table 5 from Novel Theranostic Opportunities Offered by Characterization of Altered Membrane Lipid Metabolism in Breast Cancer Progression
Supplementary Methods from Novel Theranostic Opportunities Offered by Characterization of Altered Membrane Lipid Metabolism in Breast Cancer Progression
Authors: Hilvo Mika , Denkert Carsten , Lehtinen Laura , Müller Berit , Brockmöller Scarlet , Seppänen-Laakso Tuulikki , Budczies Jan , Bucher Elmar , Yetukuri Laxman , Castillo Sandra , Berg Emilia , Nygren Heli , Sysi-Aho Marko , Griffin Julian L. , Fiehn Oliver , Loibl Sibylle , Richter-Ehrenstein Christiane , Radke Cornelia , Hyötyläinen Tuulia , Kallioniemi Olli , Iljin Kristiina , Orešič Matej
Published: March 2023

Supplementary Methods from Novel Theranostic Opportunities Offered by Characterization of Altered Membrane Lipid Metabolism in Breast Cancer Progression
Supplementary Figures 1-2 from Novel Theranostic Opportunities Offered by Characterization of Altered Membrane Lipid Metabolism in Breast Cancer Progression
Authors: Hilvo Mika , Denkert Carsten , Lehtinen Laura , Müller Berit , Brockmöller Scarlet , Seppänen-Laakso Tuulikki , Budczies Jan , Bucher Elmar , Yetukuri Laxman , Castillo Sandra , Berg Emilia , Nygren Heli , Sysi-Aho Marko , Griffin Julian L. , Fiehn Oliver , Loibl Sibylle , Richter-Ehrenstein Christiane , Radke Cornelia , Hyötyläinen Tuulia , Kallioniemi Olli , Iljin Kristiina , Orešič Matej
Published: March 2023

Supplementary Figures 1-2 from Novel Theranostic Opportunities Offered by Characterization of Altered Membrane Lipid Metabolism in Breast Cancer Progression
Supplementary Figure 1 from The Nedd8-Activating Enzyme Inhibitor MLN4924 Induces Autophagy and Apoptosis to Suppress Liver Cancer Cell Growth
Authors: Luo Zhongguang , Yu Guangyang , Lee Hyuk Woo , Li Lihui , Wang Lingyan , Yang Dongqin , Pan Yongfu , Ding Chan , Qian Jing , Wu Lijun , Chu Yiwei , Yi Jing , Wang Xiangdong , Sun Yi , Jeong Lak Shin , Liu Jie , Jia Lijun
Published: March 2023

PDF file - 1.2MB, Induction of cell cycle arrest and apoptosis by MLN4924 in Hep G2 cells
Supplementary Methods from Protein Tyrosine Phosphatase Shp2 (Ptpn11) Plays an Important Role in Maintenance of Chromosome Stability
Authors: Liu Xia , Zheng Hong , Qu Cheng-Kui
Published: March 2023

PDF file - 77K
Supplementary Figure 4 from Protein Tyrosine Phosphatase Shp2 (Ptpn11) Plays an Important Role in Maintenance of Chromosome Stability
Authors: Liu Xia , Zheng Hong , Qu Cheng-Kui
Published: March 2023

PDF file - 54K, Depletion of Shp2 results in lagging chromosomes during unperturbed (without nocodazole treatment) mitosis
Supplementary Figure 3 from SIRT1 Pathway Dysregulation in the Smoke-Exposed Airway Epithelium and Lung Tumor Tissue
Authors: Beane Jennifer , Cheng Luis , Soldi Raffaella , Zhang Xiaohui , Liu Gang , Anderlind Christina , Lenburg Marc E. , Spira Avrum , Bild Andrea H.
Published: March 2023

PDF file, 101K, The effect of modulating the number of genes in the pathway signatures on pathway activation predictions in each control dataset. The number of genes in each signature is along the x-axis and the different control datasets from Supplemental Figure 2 are shown along the y-axis. A. ATM Pathway, GSE20549. B. GPX1 pathway, GSE23895. C. IKBKB pathway, GSE18047. D. SIRT1 pathway, GSE9008. E. SIRT1 pathway, GSE13309. F. SIRT1 pathway, GSE13459.
Supplementary Figure 1 from Rab27a Supports Exosome-Dependent and -Independent Mechanisms That Modify the Tumor Microenvironment and Can Promote Tumor Progression
Authors: Bobrie Angélique , Krumeich Sophie , Reyal Fabien , Recchi Chiara , Moita Luis F. , Seabra Miguel C. , Ostrowski Matias , Théry Clotilde
Published: March 2023

PDF file - 71K, Most shRNA to Rab27a or Rab27b affect the expression level of the other gene. Expression level of Rab27a and Rab27b in cells expressing 5 different shRNA to either Rab27a or Rab27b
Supplementary Figure 3 from Targeting BRCA1 Localization to Augment Breast Tumor Sensitivity to Poly(ADP-Ribose) Polymerase Inhibition
Authors: Yang Eddy S. , Nowsheen Somaira , Rahman Mohammad A. , Cook Rebecca S. , Xia Fen
Published: March 2023

PDF file - 33K, The observed reduction in HR-mediated repair following radiation treatment is not due to cell cycle redistribution
Supplementary Figure 2 from Targeting BRCA1 Localization to Augment Breast Tumor Sensitivity to Poly(ADP-Ribose) Polymerase Inhibition
Authors: Yang Eddy S. , Nowsheen Somaira , Rahman Mohammad A. , Cook Rebecca S. , Xia Fen
Published: March 2023

PDF file - 45K, BRCA1 location determines PARP inhibitor induced cytotoxicity
Supplementary Figure 1 from Targeting BRCA1 Localization to Augment Breast Tumor Sensitivity to Poly(ADP-Ribose) Polymerase Inhibition
Authors: Yang Eddy S. , Nowsheen Somaira , Rahman Mohammad A. , Cook Rebecca S. , Xia Fen
Published: March 2023

PDF file - 40K, tr-BRCA1 fails to induce cytoplasmic shuttling of the NES BRCA1 mutant and subsequently does not induce persistent DNA damage following PARP inhibition
Supplementary Tables 1-2 from Immune-Dependent and Independent Antitumor Activity of GM-CSF Aberrantly Expressed by Mouse and Human Colorectal Tumors
Authors: Urdinguio Rocio G. , Fernandez Agustin F. , Moncada-Pazos Angela , Huidobro Covadonga , Rodriguez Ramon M. , Ferrero Cecilia , Martinez-Camblor Pablo , Obaya Alvaro J. , Bernal Teresa , Parra-Blanco Adolfo , Rodrigo Luis , Santacana Maria , Matias-Guiu Xavier , Soldevilla Beatriz , Dominguez Gemma , Bonilla Felix , Cal Santiago , Lopez-Otin Carlos , Fraga Mario F.
Published: March 2023

PDF file - 55K, (TABLE S1) Clinical information of the patients included in our study; (TABLE S2) Sequences of the primers used for the study
Supplementary Tables 1-2, Figures 1-4 from VEGF Receptor Inhibitors Block the Ability of Metronomically Dosed Cyclophosphamide to Activate Innate Immunity–Induced Tumor Regression
Authors: Doloff Joshua C. , Waxman David J.
Published: March 2023

PDF file - 1.4MB
Supplementary Tables S1-S2 from Plastin3 Is a Novel Marker for Circulating Tumor Cells Undergoing the Epithelial–Mesenchymal Transition and Is Associated with Colorectal Cancer Prognosis
Authors: Yokobori Takehiko , Iinuma Hisae , Shimamura Teppei , Imoto Seiya , Sugimachi Keishi , Ishii Hideshi , Iwatsuki Masaaki , Ota Daisuke , Ohkuma Masahisa , Iwaya Takeshi , Nishida Naohiro , Kogo Ryunosuke , Sudo Tomoya , Tanaka Fumiaki , Shibata Kohei , Toh Hiroyuki , Sato Tetsuya , Barnard Graham F. , Fukagawa Takeo , Yamamoto Seiichiro , Nakanishi Hayao , Sasaki Shin , Miyano Satoru , Watanabe Toshiaki , Kuwano Hiroyuki , Mimori Koshi , Pantel Klaus , Mori Masaki
Published: March 2023

Supplementary Tables S1-S2 PDF file - 41K, CRC Patient characteristics in training set (2000-2004) and validation set (2005-2008) (S1); Gene list of GSEA analysis (S2).
Supplementary Figure 7 from Soluble CD200 Is Critical to Engraft Chronic Lymphocytic Leukemia Cells in Immunocompromised Mice
Authors: Wong Karrie K. , Brenneman Fred , Chesney Alden , Spaner David E. , Gorczynski Reginald M.
Published: March 2023

PDF file - 151K, Engraftment of human CLL and T cells in the peritoneal cavity of anti-CD200 treated, Rituxan treated, or untreated animals: Frequencies of CD19+CD5+ CLL cells (left column) and CD4+ and CD8+ T cells (right column) in the peritoneal cavity of untreated (upper panel), anti-CD200 (Fab) treated (middle panel), or Rituxan treated (lower panel) animals. Representative FACS data from individual animals in each group are shown
Supplementary Figure 1 from Soluble CD200 Is Critical to Engraft Chronic Lymphocytic Leukemia Cells in Immunocompromised Mice
Authors: Wong Karrie K. , Brenneman Fred , Chesney Alden , Spaner David E. , Gorczynski Reginald M.
Published: March 2023

PDF file - 105K, CD200 shedding by CLL cells: Detection of sCD200 in CLL supernatant: a) CLL cells isolated from peripheral blood of patients were cultured in AIM-V medium. Supernatants were collected at 24 and 48hr time points and assessed for sCD200 level by CD200 ELISA. Variable levels of sCD200 were detected in CLL supernatants in a time dependent manner, suggesting constitutive release of sCD200. b) Treatment of CLL cells with the global protease inhibitor GM6001 at a final concentration of 20muM inhibited sCD200 shedding. Error bars are indicative of standard deviation of sCD200 levels detected in two independent ELISAs
Supplementary Figure S5 from Mitogenic Insulin Receptor-A Is Overexpressed in Human Hepatocellular Carcinoma due to EGFR-Mediated Dysregulation of RNA Splicing Factors
Authors: Chettouh Hamza , Fartoux Laetitia , Aoudjehane Lynda , Wendum Dominique , Clapéron Audrey , Chrétien Yves , Rey Colette , Scatton Olivier , Soubrane Olivier , Conti Filomena , Praz Françoise , Housset Chantal , Rosmorduc Olivier , Desbois-Mouthon Christèle
Published: March 2023

Supplementary Figure S5 - PDF file 190K, The blockage of EGFR signalling does not alter the subcellular localization of splicing factors in HCC cells
Supplementary Figure S4 from Mitogenic Insulin Receptor-A Is Overexpressed in Human Hepatocellular Carcinoma due to EGFR-Mediated Dysregulation of RNA Splicing Factors
Authors: Chettouh Hamza , Fartoux Laetitia , Aoudjehane Lynda , Wendum Dominique , Clapéron Audrey , Chrétien Yves , Rey Colette , Scatton Olivier , Soubrane Olivier , Conti Filomena , Praz Françoise , Housset Chantal , Rosmorduc Olivier , Desbois-Mouthon Christèle
Published: March 2023

Supplementary Figure S4 - PDF file 227K, CUGBP1, hnRNPH, hnRNPA2B1 and S2/ASF mRNA levels are controlled by EGFR in HuH7 cells
Supplementary Figure S1 from Mitogenic Insulin Receptor-A Is Overexpressed in Human Hepatocellular Carcinoma due to EGFR-Mediated Dysregulation of RNA Splicing Factors
Authors: Chettouh Hamza , Fartoux Laetitia , Aoudjehane Lynda , Wendum Dominique , Clapéron Audrey , Chrétien Yves , Rey Colette , Scatton Olivier , Soubrane Olivier , Conti Filomena , Praz Françoise , Housset Chantal , Rosmorduc Olivier , Desbois-Mouthon Christèle
Published: March 2023

Supplementary Figure S1 - PDF file 573K, IR status in human HCC tumours
Supplementary Figure Legends from Mitogenic Insulin Receptor-A Is Overexpressed in Human Hepatocellular Carcinoma due to EGFR-Mediated Dysregulation of RNA Splicing Factors
Authors: Chettouh Hamza , Fartoux Laetitia , Aoudjehane Lynda , Wendum Dominique , Clapéron Audrey , Chrétien Yves , Rey Colette , Scatton Olivier , Soubrane Olivier , Conti Filomena , Praz Françoise , Housset Chantal , Rosmorduc Olivier , Desbois-Mouthon Christèle
Published: March 2023

Supplementary Figure Legends - PDF file 119K, Legend for Supplementary Figures S1-S6
Supplementary Materials and Methods from Overcoming Limitations in Nanoparticle Drug Delivery: Triggered, Intravascular Release to Improve Drug Penetration into Tumors
Authors: Manzoor Ashley A. , Lindner Lars H. , Landon Chelsea D. , Park Ji-Young , Simnick Andrew J. , Dreher Matthew R. , Das Shiva , Hanna Gabi , Park Won , Chilkoti Ashutosh , Koning Gerben A. , ten Hagen Timo L.M. , Needham David , Dewhirst Mark W.
Published: March 2023

PDF file - 83K, Citation
Supplementary Table 1 from SOX4 Induces Epithelial–Mesenchymal Transition and Contributes to Breast Cancer Progression
Authors: Zhang Jianchao , Liang Qian , Lei Yang , Yao Min , Li Lili , Gao Xiaoge , Feng Jingxin , Zhang Yu , Gao Hongwen , Liu Dong-Xu , Lu Jun , Huang Baiqu
Published: March 2023

PDF file - 96K, New data of Oncomine analysis of SOX4 expression in human breast cancer tissues in comparison with normal breast tissues
Supplementary Figure Legends 1-6 from CDK1 Regulates Mediator of DNA Damage Checkpoint 1 during Mitotic DNA Damage
Authors: Yu Bing , Dalton W. Brian , Yang Vincent W.
Published: March 2023

PDF file - 106K
Supplementary Figures 1-2 from SOX4 Induces Epithelial–Mesenchymal Transition and Contributes to Breast Cancer Progression
Authors: Zhang Jianchao , Liang Qian , Lei Yang , Yao Min , Li Lili , Gao Xiaoge , Feng Jingxin , Zhang Yu , Gao Hongwen , Liu Dong-Xu , Lu Jun , Huang Baiqu
Published: March 2023

PDF file - 1.5MB, Figure S1. The SOX4 mRNA level in MCF10A cells. Figure S2. Induction of SOX4 by other EMT-inducers
Supplementary Figure 5 from CDK1 Regulates Mediator of DNA Damage Checkpoint 1 during Mitotic DNA Damage
Authors: Yu Bing , Dalton W. Brian , Yang Vincent W.
Published: March 2023

PDF file - 116K, Immunofluorescent staining of MDC1 and gammaH2AX in HT29 cells
Supplementary Figure 4 from CDK1 Regulates Mediator of DNA Damage Checkpoint 1 during Mitotic DNA Damage
Authors: Yu Bing , Dalton W. Brian , Yang Vincent W.
Published: March 2023

PDF file - 119K, Immunofluorescent staining of MDC1 and gammaH2AX in HCT116 cells
Supplementary Table 1 from Therapeutic Efficacy of Bifunctional siRNA Combining TGF-β1 Silencing with RIG-I Activation in Pancreatic Cancer
Authors: Ellermeier Jonathan , Wei Jiwu , Duewell Peter , Hoves Sabine , Stieg Mareike R. , Adunka Tina , Noerenberg Daniel , Anders Hans-Joachim , Mayr Doris , Poeck Hendrik , Hartmann Gunther , Endres Stefan , Schnurr Max
Published: March 2023

PDF file - 57K, Sequences of DNA templates for in vitro transcription of ppp-RNAs and sequences of siRNAs
Supplementary Figure Legend from Therapeutic Efficacy of Bifunctional siRNA Combining TGF-β1 Silencing with RIG-I Activation in Pancreatic Cancer
Authors: Ellermeier Jonathan , Wei Jiwu , Duewell Peter , Hoves Sabine , Stieg Mareike R. , Adunka Tina , Noerenberg Daniel , Anders Hans-Joachim , Mayr Doris , Poeck Hendrik , Hartmann Gunther , Endres Stefan , Schnurr Max
Published: March 2023

PDF file - 106K
Supplementary Figure 2 from Natural Product Triptolide Mediates Cancer Cell Death by Triggering CDK7-Dependent Degradation of RNA Polymerase II
Authors: Manzo Stefano Giustino , Zhou Zhao-Li , Wang Ying-Qing , Marinello Jessica , He Jin-Xue , Li Yuan-Chao , Ding Jian , Capranico Giovanni , Miao Ze-Hong
Published: March 2023

PDF file - 796K, SK-OV-3, HCC1937, 786-O, MDA-MB-436, and HCC1937 cells exposed to triptolide, then harvested by Western blotting
Supplementary Figure 4 from Therapeutic Efficacy of Bifunctional siRNA Combining TGF-β1 Silencing with RIG-I Activation in Pancreatic Cancer
Authors: Ellermeier Jonathan , Wei Jiwu , Duewell Peter , Hoves Sabine , Stieg Mareike R. , Adunka Tina , Noerenberg Daniel , Anders Hans-Joachim , Mayr Doris , Poeck Hendrik , Hartmann Gunther , Endres Stefan , Schnurr Max
Published: March 2023

PDF file - 42K, Effect of RNA treatment on splenic MDSC populations in tumor-bearing mice
Supplementary Figure 3 from Therapeutic Efficacy of Bifunctional siRNA Combining TGF-β1 Silencing with RIG-I Activation in Pancreatic Cancer
Authors: Ellermeier Jonathan , Wei Jiwu , Duewell Peter , Hoves Sabine , Stieg Mareike R. , Adunka Tina , Noerenberg Daniel , Anders Hans-Joachim , Mayr Doris , Poeck Hendrik , Hartmann Gunther , Endres Stefan , Schnurr Max
Published: March 2023

PDF file - 60K, CXCL10 production and lymphocyte activation induced by ppp TGF-β treatment is independent of TRIF or TLR7 signaling
Supplementary Appendix, Table 1, Figure Legends 1-4 from Serial Magnetic Resonance Spectroscopy Reveals a Direct Metabolic Effect of Cediranib in Glioblastoma
Authors: Kim Heisoog , Catana Ciprian , Ratai Eva-Maria , Andronesi Ovidiu C. , Jennings Dominique L. , Batchelor Tracy T. , Jain Rakesh K. , Sorensen A. Gregory
Published: March 2023

Supplementary Appendix, Table 1, Figure Legends 1-4 from Serial Magnetic Resonance Spectroscopy Reveals a Direct Metabolic Effect of Cediranib in Glioblastoma
Supplementary Figure 1 from Therapeutic Efficacy of Bifunctional siRNA Combining TGF-β1 Silencing with RIG-I Activation in Pancreatic Cancer
Authors: Ellermeier Jonathan , Wei Jiwu , Duewell Peter , Hoves Sabine , Stieg Mareike R. , Adunka Tina , Noerenberg Daniel , Anders Hans-Joachim , Mayr Doris , Poeck Hendrik , Hartmann Gunther , Endres Stefan , Schnurr Max
Published: March 2023

PDF file - 702K, RIG-I expression in human pancreatic carcinoma specimens
Supplementary Tables 1-5 from Epithelial Cell Organization Suppresses Myc Function by Attenuating Myc Expression
Authors: Simpson David R. , Yu Min , Zheng Siyuan , Zhao Zhongming , Muthuswamy Senthil K. , Tansey William P.
Published: March 2023

Supplementary Tables 1-5 from Epithelial Cell Organization Suppresses Myc Function by Attenuating Myc Expression
Supplementary Figure 4 from Epithelial Cell Organization Suppresses Myc Function by Attenuating Myc Expression
Authors: Simpson David R. , Yu Min , Zheng Siyuan , Zhao Zhongming , Muthuswamy Senthil K. , Tansey William P.
Published: March 2023

Supplementary Figure 4 from Epithelial Cell Organization Suppresses Myc Function by Attenuating Myc Expression
Supplementary Figure 6 from Interactions of Abiraterone, Eplerenone, and Prednisolone with Wild-type and Mutant Androgen Receptor: A Rationale for Increasing Abiraterone Exposure or Combining with MDV3100
Authors: Richards Juliet , Lim Ai Chiin , Hay Colin W. , Taylor Angela E. , Wingate Anna , Nowakowska Karolina , Pezaro Carmel , Carreira Suzanne , Goodall Jane , Arlt Wiebke , McEwan Iain J. , de Bono Johann S. , Attard Gerhardt
Published: March 2023

PDF file - 302K
Supplementary Figure 4 from Interactions of Abiraterone, Eplerenone, and Prednisolone with Wild-type and Mutant Androgen Receptor: A Rationale for Increasing Abiraterone Exposure or Combining with MDV3100
Authors: Richards Juliet , Lim Ai Chiin , Hay Colin W. , Taylor Angela E. , Wingate Anna , Nowakowska Karolina , Pezaro Carmel , Carreira Suzanne , Goodall Jane , Arlt Wiebke , McEwan Iain J. , de Bono Johann S. , Attard Gerhardt
Published: March 2023

PDF file - 536K
Supplementary Figure 1 from Epithelial Cell Organization Suppresses Myc Function by Attenuating Myc Expression
Authors: Simpson David R. , Yu Min , Zheng Siyuan , Zhao Zhongming , Muthuswamy Senthil K. , Tansey William P.
Published: March 2023

Supplementary Figure 1 from Epithelial Cell Organization Suppresses Myc Function by Attenuating Myc Expression
Supplementary Figure 1 from Evolutionary Approaches to Prolong Progression-Free Survival in Breast Cancer
Authors: Silva Ariosto S. , Kam Yoonseok , Khin Zayar P. , Minton Susan E. , Gillies Robert J. , Gatenby Robert A.
Published: March 2023

PDF file - 41K, Computational model of competition between drug sensitive and PGP+ mutants
Supplementary Figure Legends 1-9, Methods from Glutamine Deprivation Enhances Antitumor Activity of 3-Bromopyruvate through the Stabilization of Monocarboxylate Transporter-1
Authors: Cardaci Simone , Rizza Salvatore , Filomeni Giuseppe , Bernardini Roberta , Bertocchi Fabio , Mattei Maurizio , Paci Maurizio , Rotilio Giuseppe , Ciriolo Maria Rosa
Published: March 2023

PDF file - 211K
Supplementary Table 1, Figures 4-7 from Polyploidization of Murine Mesenchymal Cells Is Associated with Suppression of the Long Noncoding RNA H19 and Reduced Tumorigenicity
Authors: Shoshani Ofer , Massalha Hassan , Shani Nir , Kagan Sivan , Ravid Orly , Madar Shalom , Trakhtenbrot Luba , Leshkowitz Dena , Rechavi Gideon , Zipori Dov
Published: March 2023

PDF file - 176K, Supplementary figures describing the molecular analysis performed on 2N and 4N cells as well as on tumor derived cells. Includes a table listing the primers used in the study
Supplementary Figure 8 from Glutamine Deprivation Enhances Antitumor Activity of 3-Bromopyruvate through the Stabilization of Monocarboxylate Transporter-1
Authors: Cardaci Simone , Rizza Salvatore , Filomeni Giuseppe , Bernardini Roberta , Bertocchi Fabio , Mattei Maurizio , Paci Maurizio , Rotilio Giuseppe , Ciriolo Maria Rosa
Published: March 2023

PDF file - 98K, Glutamine synthetase is exploited by cancer cells to circumvent 3-BrPA chemo-potentiation
Supplementary Figure 3 from Polyploidization of Murine Mesenchymal Cells Is Associated with Suppression of the Long Noncoding RNA H19 and Reduced Tumorigenicity
Authors: Shoshani Ofer , Massalha Hassan , Shani Nir , Kagan Sivan , Ravid Orly , Madar Shalom , Trakhtenbrot Luba , Leshkowitz Dena , Rechavi Gideon , Zipori Dov
Published: March 2023

PDF file - 162K, Gating of diploid and polyploid hepatocytes for sorting
Supplementary Figure 2 from Polyploidization of Murine Mesenchymal Cells Is Associated with Suppression of the Long Noncoding RNA H19 and Reduced Tumorigenicity
Authors: Shoshani Ofer , Massalha Hassan , Shani Nir , Kagan Sivan , Ravid Orly , Madar Shalom , Trakhtenbrot Luba , Leshkowitz Dena , Rechavi Gideon , Zipori Dov
Published: March 2023

PDF file - 329K, Gene expression analysis comparing diploid and tetraploid MSCs
Supplementary Figure 1 from Polyploidization of Murine Mesenchymal Cells Is Associated with Suppression of the Long Noncoding RNA H19 and Reduced Tumorigenicity
Authors: Shoshani Ofer , Massalha Hassan , Shani Nir , Kagan Sivan , Ravid Orly , Madar Shalom , Trakhtenbrot Luba , Leshkowitz Dena , Rechavi Gideon , Zipori Dov
Published: March 2023

PDF file - 205K, Spectral karyotype analysis of tumor cells originating from MSC injections
Supplementary Figure 1 from Glutamine Deprivation Enhances Antitumor Activity of 3-Bromopyruvate through the Stabilization of Monocarboxylate Transporter-1
Authors: Cardaci Simone , Rizza Salvatore , Filomeni Giuseppe , Bernardini Roberta , Bertocchi Fabio , Mattei Maurizio , Paci Maurizio , Rotilio Giuseppe , Ciriolo Maria Rosa
Published: March 2023

PDF file - 127K, Chemo-potentiation of 3-BrPA cytotoxicity is not associated with the activation of apoptosis
Supplementary Table 8 from B-Raf Activation Cooperates with PTEN Loss to Drive c-Myc Expression in Advanced Prostate Cancer
Authors: Wang Jingqiang , Kobayashi Takashi , Floc'h Nicolas , Kinkade Carolyn Waugh , Aytes Alvaro , Dankort David , Lefebvre Celine , Mitrofanova Antonina , Cardiff Robert D. , McMahon Martin , Califano Andrea , Shen Michael M. , Abate-Shen Cory
Published: March 2023

XLS file - 188K, List of differentially expressed genes between RAP + PD treated and Vehicle treated Nkx3.1CE2/+; Ptenf/f; Braf CA/+ mouse prostate tumors (p-value<0.01)
Supplementary Figure Legend from Twist1 Induces CCL2 and Recruits Macrophages to Promote Angiogenesis
Authors: Low-Marchelli Janine M. , Ardi Veronica C. , Vizcarra Edward A. , van Rooijen Nico , Quigley James P. , Yang Jing
Published: March 2023

PDF file - 88K
Supplementary Results from CXCR2 Expression in Tumor Cells Is a Poor Prognostic Factor and Promotes Invasion and Metastasis in Lung Adenocarcinoma
Authors: Saintigny Pierre , Massarelli Erminia , Lin Steven , Ahn Young-Ho , Chen Yulong , Goswami Sangeeta , Erez Baruch , O'Reilly Michael S. , Liu Diane , Lee J. Jack , Zhang Li , Ping Yuan , Behrens Carmen , Solis Soto Luisa M. , Heymach John V. , Kim Edward S. , Herbst Roy S. , Lippman Scott M. , Wistuba Ignacio I. , Hong Waun Ki , Kurie Jonathan M. , Koo Ja Seok
Published: March 2023

XLSX file - 1MB, List of genes in excel format