bluuebunny/crossref_metadata_2025 huggingface dataset:
Beyond Inflammation: Role of Pyroptosis Pathway Activation by Gram-Negative Bacteria and Their Outer Membrane Vesicles (OMVs) in the Interaction with the Host Cell
Authors: Resta Silvia Caterina , Guerra Flora , Talà Adelfia , Bucci Cecilia , Alifano Pietro
Published: October 2024

Pyroptosis is a gasdermin-mediated pro-inflammatory programmed cell death that, during microbial infections, aims to restrict the spreading of bacteria. Nevertheless, excessive pyroptosis activation leads to inflammation levels that are detrimental to the host. Pathogen-associated molecular patterns (PAMPs) present in bacteria and outer membrane vesicles (OMVs) can trigger pyroptosis pathways in different cell types with different outcomes. Moreover, some pathogens have evolved virulence factors that directly interfere with pyroptosis pathways, like Yersinia pestis YopM and Shigella flexneri IpaH7.8. Other virulence factors, such as those of Neisseria meningitidis, Neisseria gonorrhoeae, Salmonella enterica, and Helicobacter pylori affect pyroptosis pathways indirectly with important differences between pathogenic and commensal species of the same family. These pathogens deserve special attention because of the increasing antimicrobial resistance of S. flexneri and N. gonorrhoeae, the high prevalence of S. enterica and H. pylori, and the life-threatening diseases caused by N. meningitidis and Y. pestis. While inflammation due to macrophage pyroptosis has been extensively addressed, the effects of activation of pyroptosis pathways on modulation of cell cytoskeleton and cell–cell junctions in epithelia and endothelia and on the bacterial crossing of epithelial and endothelial barriers have only been partly investigated. Another important point is the diverse consequences of pyroptosis pathways on calcium influx, like activation of calcium-dependent enzymes and mitochondria dysregulation. This review will discuss the pyroptotic pathways activated by Gram-negative bacteria and their OMVs, analyzing the differences between pathogens and commensal bacteria. Particular attention will also be paid to the experimental models adopted and the main results obtained in the different models. Finally, strategies adopted by pathogens to modulate these pathways will be discussed with a perspective on the use of pyroptosis inhibitors as adjuvants in the treatment of infections.
Comparison οf Immune Responses Through Multiparametric T-Cell Cytokine Expression Profile Between Children with Convalescent COVID-19 or Multisystem Inflammatory Syndrome
Authors: Filippatos Filippos , Tzanoudaki Marianna , Tatsi Elizabeth-Barbara , Dessypris Nick , Koukou Dimitra-Maria , Georgokosta Chrysa , Syriopoulou Vasiliki , Michos Athanasios
Published: October 2024

Background/objectives: The immunological pathways that cause Multisystem Inflammatory Syndrome after SARS-CoV-2 infection in children (MIS-C) remain under investigation. Methods: The aim of this study was to prospectively compare the T-cell cytokine expression profile in unvaccinated children with acute MIS-C (MISC_A) before immunosuppression, convalescent MIS-C (one month after syndrome onset, MISC_C), convalescent COVID-19 (one month after hospitalization), and in healthy, unvaccinated controls. The intracellular expression of IL-4, IL-2, IL-17, IFNγ, TNF-α and Granzyme B, and the post SARS-CoV-2-Spike antigenic mix stimulation of T-cell subsets was analyzed by 13-color flow cytometry. Results: Twenty children with a median age (IQR) of 11.5 (7.25–14) years were included in the study. From the comparison of the flow cytometry analysis of the 14 markers of MISC_A with the other three groups (MISC_C, post-COVID-19 and controls), significant differences were identified as follows: 1. CD4+IL-17+/million CD3+: 293.0(256.4–870.9) vs. 50.7(8.4–140.5); p-value: 0.03, vs. 96.7(89.2–135.4); p-value: 0.03 and vs. 8.7(0.0–82.4); p-value: 0.03, respectively; 2. CD8+IL-17+/million CD3+: 335.2(225.8–429.9) vs. 78.0(31.9–128.9) vs. 84.1(0.0–204.6) vs. 33.2(0.0–114.6); p-value: 0.05, respectively; 3. CD8+IFNγ+/million CD3+: 162.2(91.6–273.4) vs. 41.5(0.0–77.4); p-value: 0.03 vs. 30.3(0.0–92.8); p-value: 0.08, respectively. Conclusions: In children presenting with MIS-C one month after COVID-19 infection, T cells were found to be polarized towards IL-17 and IFNγ production compared to those with uncomplicated convalescent COVID-19, a finding that could provide possible immunological biomarkers for MIS-C detection.
Single-Cell Analysis Reveals the Cellular and Molecular Changes of Liver Injury and Fibrosis in Mice During the Progression of Schistosoma japonicum Infection
Authors: Lu Julu , Zhang Xinyue , Dong Panpan , Mei Congjin , Yang Yingying , Yu Chuanxin , Song Lijun
Published: October 2024

Schistosomiasis is a parasitic disease that poses a serious threat to human health. However, the pathogenic mechanism during the progression of Schistosoma japonicum infection remains unclear. In order to elucidate this mechanism, we used single-cell RNA sequencing (scRNA-seq) to investigate the transcriptome characteristics of the cellular (single-cell) landscape in the livers of mice infected with Schistosoma japonicum, which were divided into three groups: uninfected mice (0 week (w)), infected mice at 6 w post-infection (the acute phase), and infected mice at 10 w post-infection (the chronic phase). A total of 31,847 liver cells were included and clustered into 21 groups. The cells and T-cells had high heterogeneity in the liver during the progression of schistosome infection. The number and intensity of the intercellular interactions significantly increased at 6 w after infection but decreased at 10 w. The inflammatory signaling pathways chemoattractant cytokine ligand (CCL)5-chemokine C-C-motif receptor (CCR)5 between macrophages and T-cells were predominant at 6 w post-infection; the CCL6-CCR2 signaling pathway between macrophages was predominant at 10 w. The CD80 signaling pathway related to T-cell activation was increased at 6 w after infection, and increased expression of its receptor CD28 on the surfaces of CD4+ and CD8+ T-cells was confirmed by flow cytometry, suggesting an increase in their activation. In addition, scRNA-seq and quantitative reverse transcription polymerase chain reaction (qRT-PCR) confirmed that the intercellular communication between secretory phosphoprotein 1 (SPP1)-cluster of differentiation (CD44), insulin-like growth factor (IGF)-1-IGF1r and visfatin-insulin receptor (Insr) associated with bone metabolism and insulin metabolism was increased and enhanced in the liver at 6 w post-infection. Overall, we provide the comprehensive single-cell transcriptome landscape of the liver in mice during the progression of schistosome infection and delineate the key cellular and molecular events involved in schistosome infection-induced liver injury and fibrosis. The elevated CCL5-CCR5 and CCL6-CCR2 signaling pathways in the liver may be a drug target for liver injury and fibrosis caused by schistosome infection, respectively.
Transcriptomic Remodeling Occurs During Cambium Activation and Xylem Cell Development in Taxodium ascendens
Authors: Du Kebing , Xu Youming , Wang Ningning , Qin Liyuan , Tao Jieyun
Published: October 2024

Taxodium ascendens has been extensively cultivated in the wetlands of the Yangtze River in south China and has significantly contributed to ecology and timber production. Until now, research on T. ascendens genomics has yet to be conducted due to its large and complex genome, which hinders the development of T. ascendens genomic resources. Combined with the microstructural changes during cambium cell differentiation across various growth periods, we investigate the transcriptome expression and regulatory mechanisms governing cambium activity in T. ascendens. Using RNA sequencing (RNA-Seq) technology, we identified the genes involved in the cambium development of cells at three stages (dormancy, reactivation, and activity). These genes encode the regulatory and control factors associated with the cambial activity, cell division, cell expansion, and biosynthesis of cell wall components. Blast comparison revealed that three genes (TR_DN69961_c0_g1, TRINITY_DN17100_c1_g1, TRINITY_DN111727_c0_g1) from the MYB and NAC families might regulate transcription during lignin formation in wood thickening. These results illustrate the dynamic changes in the transcriptional network during vascular cambium development. Additionally, they shed light on the genetic regulation mechanism of secondary growth in T. ascendens and guide further elucidation of the candidate genes involved in regulating cambium differentiation and wood formation.
Design and Performance Test of Four-Chamber Series–Parallel Piezoelectric Pump
Authors: Jie Meng , Qi Zhenxiang , Yu Wenxin , Ma Tengfei , Zhao Yejing , Cai Lutong
Published: October 2024

In order to improve the output performance of multi-chamber piezoelectric pumps, this paper proposes a novel design for a four-chamber series–parallel piezoelectric pump, based on the characteristics that the parallel chamber structure significantly increases the output flow rate, and the series chamber structure effectively improves the output pressure. The theoretical output flow rate and pressure of the four-chamber series–parallel piezoelectric pump were calculated, and a prototype was fabricated. Tests were conducted to compare the liquid transport performance of piezoelectric pumps with three different structures: series, parallel, and series–parallel. The results show that, when transporting liquid, the output flow rate of the four-chamber series–parallel structure increased by up to 13.3% compared to the four-chamber series structure, reaching a maximum of 767 mL/min. Additionally, the maximum output pressure of the series–parallel structure increased by 43.4% compared to the four-chamber parallel structure, reaching 42.3 kPa. The four-chamber series–parallel design combines the advantages of both series and parallel configurations, improving the output performance of the piezoelectric pump and providing a reference for the structural design of multi-chamber piezoelectric pumps.
Experimental Study on the Mechanical Properties of Basalt Fiber Geogrids Reinforced with Cement-Stabilized Macadam
Authors: Zhu Yu , He Yuan , Yuan Xiaodong , Gao Jiangping , Wang Zhi
Published: October 2024

Cement-stabilized crushed stone is widely used in the construction of high-grade highways because of its good durability and stability. However, cement-stabilized gravel is also easily affected by temperature and humidity, resulting in a reduction in the overall strength and durability of asphalt pavement. In response to this problem, in this study, we lay a single layer of a basalt fiber geogrids in a cement-stabilized gravel base of a test section of the Yan-Chong Expressway. The bonding and friction forces formed between the basalt fiber geogrids and the base as well as the mechanical bite force, play an anti-cracking role. We conducted a comparative experimental study on the mechanical properties of basalt fiber geogrids reinforced or not reinforced with cement-stabilized gravel specimens of different ages. The results showed that (1) the unconfined compressive strength of cement-stabilized gravel was slightly reduced; (2) the splitting strength was somewhat improved; (3) the compressive elastic modulus was slightly reduced; (4) the flexural and tensile strengths were significantly increased. An improvement in the crack resistance in semi-rigid base materials can improve the service life of high-grade asphalt pavements.
Comparative Analysis of Graphitization Characteristics in Bamboo and Oak Charcoals for Secondary Battery Anodes
Authors: Lee Kiseon , Ryu Seung-Kon , Kim Hong-Gun , Kwac Lee-Ku , Kim Young-Soon
Published: October 2024

When compared to natural graphite, artificial graphite has advantages such a longer cycle life, faster charging rates, and better performance. However, the process of producing it, which frequently uses coal, raises questions about the impact on the environment and the depletion of resources. Eco-friendly, wood-based graphite must be developed in order to solve these problems. This study assessed and investigated the characteristics of charcoals derived from bamboo and oak which were utilized to produce graphite. After heating to 1500 °C at 10 K/min, 86.87 wt% of oak charcoal and 88.33 wt% of bamboo charcoal remained, indicating a yield of more than 85% when charcoal was graphitized. Depending on the species of wood, different-sized pores showed different shapes as the graphitization process advanced, as revealed by SEM surface analyses. The carbon atoms seen in the XRD crystal development changed into graphite crystals when heated to 2400 °C, and the isotropic peaks vanished. Bamboo charcoal has a higher degree of crystallinity than other wood-based charcoals, such as oak charcoal, which is made up of turbostratic graphite, according to Raman spectroscopic research. Lithium-ion batteries employ bamboo charcoal as their anode material. At this point, the values for soft carbon were determined to be 196 mAh/g and for hard carbon to be 168 mAh/g at a current density of 0.02 A/g.
Revealing Enhanced Optical Modulation and Coloration Efficiency in Nanogranular WO3 Thin Films Through Precursor Concentration Modifications
Authors: Morankar Pritam J. , Amate Rutuja U. , Ahir Namita A. , Jeon Chan-Wook
Published: October 2024

Electrochromic (EC) materials allow for dynamic tuning of optical properties via an applied electric field, presenting great potential in energy-efficient technologies, such as smart windows for effective light and temperature regulation. The precise control of precursor concentration has proven to be a powerful approach in tailoring the physicochemical properties of semiconducting metal oxides. In this study, we employed a one-step electrodeposition technique to fabricate tungsten oxide (WO3) thin films, systematically exploring how varying precursor concentrations influence the material’s characteristics. X-ray diffraction analysis revealed significant changes in diffraction patterns, reflecting subtle structural modifications due to concentration variations. Additionally, scanning electron microscopy revealed significant changes in the microstructure, showing a progression from small nanogranules to larger agglomerations within the film matrix. The W-25 mM thin film delivered exceptional EC performance, efficiently accommodating lithium ions while showcasing superior EC properties. The optimized electrode, denoted as W-25 mM, showcased exceptional EC metrics, featuring the highest optical modulation at 82.66%, outstanding reversibility at 99%, and a notably high coloring efficiency of 83.01 cm2/C. These findings emphasize the importance of precursor concentration optimization in enhancing the EC properties of WO3 thin films, contributing to the advancement of high-performance, energy-efficient materials.
Esophagitis and Pneumonitis Related to Concurrent Chemoradiation ± Durvalumab Consolidation in Unresectable Stage III Non-Small-Cell Lung Cancer: Risk Assessment and Management Recommendations Based on a Modified Delphi Process
Authors: Brade Anthony M. , Bahig Houda , Bezjak Andrea , Juergens Rosalyn A. , Lynden Charmaine , Marcoux Nicolas , Melosky Barbara , Schellenberg Devin , Snow Stephanie
Published: October 2024

The addition of durvalumab consolidation to concurrent chemoradiation therapy (cCRT) has fundamentally changed the standard of care for patients with unresectable stage III non-small-cell lung cancer (NSCLC). Nevertheless, concerns related to esophagitis and pneumonitis potentially impact the broad application of all regimen components. A Canadian expert working group (EWG) was convened to provide guidance to healthcare professionals (HCPs) managing these adverse events (AEs) and to help optimize the patient experience. Integrating literature review findings and real-world clinical experience, the EWG used a modified Delphi process to develop 12 clinical questions, 30 recommendations, and a risk-stratification guide. The recommendations address risk factors associated with developing esophagitis and pneumonitis, approaches to risk mitigation and optimal management, and considerations related to initiation and re-initiation of durvalumab consolidation therapy. For both AEs, the EWG emphasized the importance of upfront risk assessment to inform the treatment approach, integration of preventative measures, and prompt initiation of suitable therapy in alignment with AE grade. The EWG also underscored the need for timely, effective communication between multidisciplinary team members and clarity on responsibilities. These recommendations will help support HCP decision-making related to esophagitis and pneumonitis arising from cCRT ± durvalumab and improve outcomes for patients with unresectable stage III NSCLC.
White Rot Disease Occurs on Wild Individuals of the Economically Important Red Seaweed Halymenia durvillei (Rhodophyta)
Authors: Santiañez Wilfred John E.
Published: October 2024

Seaweed diseases have been reported in both wild and cultivated seaweed species worldwide. However, reports on tropical seaweed diseases are uncommon and are often focused on farmed species. In the Philippines, seaweed diseases have been reported in economically important species such as Eucheuma, Kappaphycus, and Halymenia. Regarding Halymenia, the occurrence of white rot disease has been reported on laboratory-reared and open sea-outplanted individuals. Here, I report for the first time the occurrence of white rot disease on Halymenia durvillei as observed in the wild. While the disease may have detrimental effects, I hypothesize that the disease and the subsequent breaking of branches may play a role in the dispersal and reproductive success of H. durvillei. Nonetheless, studies on the bio-ecology of its pathogen and the impacts of the disease should be conducted considering the commercial potential of H. durvillei farming.
Expression of TRPS1 in Metastatic Tumors of the Skin: An Immunohistochemical Study of 72 Cases
Authors: Boulogeorgou Kassiani , Topalidis Christos , Koletsa Triantafyllia , Karayannopoulou Georgia , Kanitakis Jean
Published: October 2024

TRPS1 (Tricho-rhino-phalangeal syndrome 1) is a GATA transcriptional activator gene encoding for a protein used as a sensitive immunohistochemical marker of breast carcinomas. In dermatopathology, TRPS1 is used as a marker of mammary and extramammary Paget’s disease and is also expressed by a variety of primary cutaneous tumors, mostly of adnexal origin. So far, very limited data exist on the expression of TRPS1 in metastatic skin tumors. We studied the immunohistochemical expression of TRPS1 in 72 cutaneous metastatic tumors from the breast (n: 19) and other origins (n: 53) in order to assess its diagnostic usefulness. The intensity of TRPS1 immunostaining was expressed as a histoscore: the product of the percentage of positive cells (scored semi-quantitatively 0–4) and the staining intensity (scored 0–3). In normal skin, nuclear TRPS1 expression was predominantly observed in cells of adnexal structures (pilosebaceous follicles and sweat glands). Eighteen (18/19, 94.7%) metastatic breast carcinomas showed diffuse and strong TRPS1 positivity (histoscore 12). Lower reactivity was found in some other metastases, including from the lung (11/22), the female genital tract (3/4), and the kidney (2/4), whereas most (20/22) metastases from the digestive system and peritoneum, along with a case of metastatic prostate carcinoma, were negative. These results suggest that a high histoscore for TRPS1 is in favor of the mammary origin of metastatic cutaneous carcinoma. Although TRPS1 is not absolutely specific or sensitive to a particular primary, we consider that it can be added to a panel of other markers when investigating the origin of a cutaneous metastasis, namely when this is the first manifestation of the neoplastic disease.
Decentralized Multi-Agent Search for Moving Targets Using Road Network Gaussian Process Regressions
Authors: Moon Brady , Akagi Christine , Peterson Cameron K.
Published: October 2024

Unmanned aerial vehicles (UAVs) can collaborate as teams to accomplish diverse mission objectives, such as target search and tracking. This paper introduces a method that leverages accumulated target-density information over the course of a UAV mission to adapt path-planning rewards, guiding UAVs toward areas with a higher likelihood of target presence. The target density is modeled using a Gaussian process, which is iteratively updated as the UAVs search the environment. Unlike conventional search algorithms that prioritize unexplored regions, this approach incentivizes revisiting target-rich areas. The target-density information is shared across UAVs using decentralized consensus filters, enabling cooperative path selection that balances the exploration of uncertain regions with the exploitation of known high-density areas. The framework presented in this paper provides an adaptive cooperative search method that can quickly develop an understanding of the region’s target-dense areas, helping UAVs refine their search. Through Monte Carlo simulations, we demonstrate this method in both a 2D grid region and road networks, showing up to a 26% improvement in target density estimates.
Does It Matter Whether to Use Circular or Square Plots in Forest Inventories? A Multivariate Comparison
Authors: Velasco-Bautista Efrain , Gonzalez-Hernandez Antonio , Romero-Sanchez Martin Enrique , Guerra-De La Cruz Vidal , Perez-Miranda Ramiro
Published: October 2024

The design of a sampling unit, whether a simple plot or a subplot within a clustered structure, including shape and size, has received little attention in inferential forestry research. The use of auxiliary variables from remote sensing impacts the precision of estimators from both model-assisted and model-based inference perspectives. In both cases, model parameters are estimated from a sample of field plots and information from pixels corresponding to these units. In studies assisted by remote sensing, the shape of the plot used to fit regression models (typically circular) often differs from the shape of the population elements for prediction, where the area of interest is divided into equal tessellated parts. This raises interest in understanding the effect of the sampling unit shape on the mean of variables in forest stands of interest. Therefore, the objective of this study was to evaluate the effect of circular and square subplots, concentrically overlapped and arranged in an inverted Y cluster structure, over tree density, basal area, and aboveground biomass in a managed temperate forest in central Mexico. We used a Multivariate Generalised Linear Mixed Model, which considers the Gamma distribution of the variables and accounts for spatial correlation between Secondary Sampling Units nested within the Primary Sampling Unit. The main findings of this study indicate that the type of secondary sampling unit of the same area and centroid, whether circular or square, does not significantly affect the mean tree density (trees), basal area (m2), and aerial biomass.
Assessing the Impacts of Nature-Based Solutions on Ecosystem Services: A Water-Energy-Food-Ecosystems Nexus Approach in the Nima River Sub-Basin (Colombia)
Authors: Restrepo Juan Diego , Bottaro Giorgia , Barci Linda , Beltrán Lucila Marcela , Londoño-Behaine Martín , Masiero Mauro
Published: October 2024

Forest ecosystem services are critical for maintaining ecological balance and supporting human well-being from different perspectives. However, rapid land use changes driven by agricultural expansion, urbanization, and industrial activities have significantly altered forest ecosystems, degrading the services they provide. We here conduct an ecosystem service assessment through biophysical and economic estimates for a multipurpose Andean water sub-basin in western Colombia. We compare a business as usual (BAU) with a forest nature-based solution (NbS) scenario focused on forest landscape restoration. The research employed participatory methods for the NbS selection and economic valuation techniques to evaluate water flow regulation, water provisioning, water purification, and food provisioning services. Results show that the NbS scenario yielded a net positive economic impact across most evaluated ecosystem services, with notable trade-offs. Specifically, the NbS scenario increased water retention by 2.9% compared to BAU. Water flow regulation demonstrated the most substantial economic benefit, increasing by EUR 11.39 million/year in the NbS scenario. On the other hand, the food provisioning service presented a reduction of EUR 3.2 million/year in the NbS scenario. These findings highlight the potential of forest-based NbS to address the Water–Energy–Food–Ecosystem (WEFE) nexus challenges. The study’s outcomes provide valuable insights for policymakers and practitioners, supporting the development of Payment for Ecosystem Services schemes and integrating ecosystem service valuation into land use planning and decision-making processes.
Thermal Comfort Simulation-Based Forest Management Scenarios for Forest Healing
Authors: Song Doyun , Park Sujin , Lee Yeonhee , Kim Geonwoo
Published: October 2024

Background and objectives: Forest environments provide various healing benefits for humans and have been widely studied. Nevertheless, the field of forest management for forest healing remains relatively understudied. The purpose of this study is to utilize thermal environmental simulation to derive forest management scenarios that are optimized for forest healing. Methods: This study focused on the Seogwipo Experimental Forest on Jeju Island, Korea. Three-dimensional forest models were generated based on field surveys. Thermal environment simulations were conducted using Grasshopper with the Ladybug and Honeybee plug-ins, and the thermal comfort levels of six forest management scenarios were evaluated using the Universal Thermal Climate Index (UTCI). Results: The simulation results showed that, among all the scenarios, only scenario (c), “10% thinning in the buffer zone”, led to an improvement in thermal comfort. Additionally, the study identified discrepancies in thermal comfort between different forest management scenarios. Conclusions: In the management of forests for healing forestry purposes, the distinction of forest zones by use and the application of different forest management scenarios have thermal comfort implications. Thus, the methodology could be employed in forest management for forest healing purposes.
Optimizing Multi-Tier Scheduling and Secure Routing in Edge-Assisted Software-Defined Wireless Sensor Network Environment Using Moving Target Defense and AI Techniques
Authors: Alnaser As’ad Mahmoud As’ad , Saloum Said S. , Sharadqh Ahmed A. M. , Hatamleh Hazem (Moh’d Said)
Published: October 2024

Software Defined Wireless Sensor Networks (SDWSN) enable flexibility in Wireless Sensor Network (WSN) environments by defining the controllable functions to WSN nodes by the Software Defined Network (SDN) controller. Due to the rapid evolution of SDWSNs, adverse effects also have occurred in terms of interference, energy consumption, and security issues. Several state-of-the-art works lend their utmost best to the SDWSN environment. However, the complete picture (i.e., relatability and security in SDWSN) poses severe challenges. The state-of-the-art issues is addressed in this research by proposing interference-aware Multi-Tier Scheduling for the SDWSN environment (MTS-SDWSN). First, we perform network construction in which the proposed network is constructed in a 2D hexagonal grid structure to resolve the connectivity issue. Upon constructing the network, the SDWSN nodes are clustered and managed to reduce the energy consumption using the Divide Well To Merge Better (DWTMB) algorithm in which the optimal Cluster Leader (CL) is selected based on adequate constraint. The data from the clustered nodes are sent to the Local Base Station (LBS) via CL in which they are scheduled in multi-tier format to diminish the complexity and interference issues. The first tier involved in scheduling among Cluster Members (CMs) and CL using adequate metrics, whereas the successive tiers (i.e., second and third) involved in scheduling among CLs to LBSs and LBSs to Sink Node (SN) are done using the Non-Cooperative Fuzzy Theory (NCFT) method. Last, the scheduled nodes are routed to appropriate destinations using Secure and Optimal Routing Protocol (SORP). The proposed SORP includes the Alibaba and Forty Thieves (AFT) and Multi Criteria Decision Making (MCDM) algorithms for selecting and ranking the optimal routes. Further, the security of the routes is enabled by adopting trust and Moving Target Defense (MTD) mechanisms. The MTD includes route switching among the SDWSN devices and active switch handling using Cycle Generative Adversarial Networks (CGAN) among the switches. The proposed work is implemented using a NS-3.26 simulation tool, and performance of the proposed model and existing works shows that the proposed work outperforms the existing works.
Developmental Toxicity and Teratogenic Effects of Dicarboximide Fungicide Iprodione on Zebrafish (Danio rerio) Embryos
Authors: Yoon Chang-Young , Chon Kyongmi , Vasamsetti Bala Murali Krishna , Hwang Sojeong , Park Kyeong-Hun , Kyung Kee Sung
Published: October 2024

Iprodione (IDN) is a broad-spectrum fungicide used to treat various fungal infections in plants. Despite its extensive use, assessment of its toxicity in aquatic organisms remains incomplete. This study investigated the deleterious effects of IDN using zebrafish (ZF) as a model organism. ZF embryos, beginning at 2 h post-fertilization (hpf), were exposed to IDN (3.75–40 mg/L), and both mortality and deformities were assessed. The impact of IDN on mortality was concentration-dependent and significant from 14 mg/L. Importantly, IDN induced several deformities at sublethal concentrations, including abnormal somites, reduced retinal pigment accumulation, yolk sac edema, hatching failure, abnormal swim bladders, and spinal curvature. The EC50 values for IDN-induced deformities were 3.44 ± 0.74 to 21.42 ± 6.00 mg/L. The calculated teratogenic index values for all deformities were above 1, indicating that IDN is teratogenic to ZF. IDN-exposed ZF also displayed abnormalities in touch-evoked escape responses. IDN significantly affected heart rate and blood flow, and induced pericardial edema and hyperemia in a concentration-dependent manner, suggesting its influence on cardiac development and the function of ZF. In conclusion, these results suggest that IDN exerts toxic effects on ZF embryos, affecting mortality, development, and behavior.
Effects of Channelling a Peripherally Inserted Central Venous Catheter on Blood Flow
Authors: Hernández-Cabré Laura , Ulldemolins-Rams Marta , Vilanova-Corsellas Judit , Torras Carles
Published: October 2024

A catheter is a device that is inserted into the venous system to infuse treatment with controlled doses per unit of time. The study of its interaction with blood flow cannot be easily analysed with common analytical methods or different visualization techniques in real life. Computational Fluid Dynamics has become a very useful tool in a wide variety of fields of scientific study and has allowed access to the understanding of the anatomical and physiological functioning of the human body. In this work, Computational Fluid Dynamics is used to study the effects of inserting a catheter on blood flow and the quality of the mixture of blood with the various substances infused through this device. Results show that the insertion of the catheter not only does not worsen the blood circulation but improves it by reducing stagnant zones. Regarding mixture, a homogenization of the fluids in the venous area before their entrance to the heart was observed. Highest quality mixtures correspond to fewer infused fluids and at lower velocity.
Does Fungal Chitosan Leave Noticeable Traces in Treated Wines?
Authors: Paulin Margot , Miot-Sertier Cécile , Miranda Julie , Vallet-Courbin Amélie , Maupeu Julie , Delattre Cédric , Coulon Joana , Moine Virginie , Marchal Axel , Roi Stéphanie , Doco Thierry , Dols-Lafargue Marguerite
Published: October 2024

Background (1): The use of fungal chitosan as an antiseptic in wine appears as a promising alternative to sulfur dioxide for the elimination of Brettanomyces bruxellensis sensitive strains. Nevertheless, its utilization raises the question, “how are the treated wines different from the untreated ones?” Methods (2): Chitosan treatment residues were sought in the oligosaccharide and polysaccharide fractions and among 224 low MW ions (<1800 g·mol−1) in several wines by using liquid chromatography (size exclusion HPLC or LC-MS) and GC-MS. Standard oenological parameters were also examined as well as possible sensory modifications by a panel of tasters composed of experts and non-experts. Results (3): None of these methods enabled the reproducible and reliable identification of a treated wine without comparing it to its untreated control. The fingerprints of treatment are not reliably detectable by the analytical methods used in this study. However, the treated wines seem permanently protected against the development of chitosan-sensitive strains of B. bruxellensis. Conclusions (4): If chitosan treatment modifies the wine, the associated changes were not identified by the liquid chromatography method mentioned above and they were not perceived by most people in our taster panel. However, the expected antimicrobial action of chitosan was observed on B. bruxellensis sensitive strains and persisted at least one year. Tolerant strains were less affected by these persistent effects.
A Comparative Analysis of Aroma Profiles of Soju and Other Distilled Spirits from Northeastern Asia
Authors: Hwang In-Seo , Kim Chan-Woo , Kim Bo Ram , Lim Bo-Ra , Choi Ji-Ho
Published: October 2024

The soju (Korean traditional distilled liquor) market is increasing worldwide. However, in contrast to well-explored distilled liquors, including baijiu (China) and shochu (Japan), soju is less investigated, with limited research on its aroma characteristics. To facilitate better understanding of the aroma characteristics of soju, this study aims to overview recent research on the flavor characteristics of soju and compare data with those of baijiu and shochu, well-established products in the market. Soju is generally made using rice and nuruk (a traditional Korean fermentation starter). Previous studies have reflected that the aroma characteristics vary with raw materials’ nutrition percentages, microbial taxa influenced in fermentation starters, and/or pressure reduction during distillation. The research on the aroma characteristics of baijiu, characterized by solid-state fermentation involving qu (a traditional Chinese fermentation starter), is focused on differences in regional characteristics of the flavor type. Research on the aroma characteristics of shochu has primarily demonstrated that the microbial community could contribute significantly to the development of specific aromatic compounds and/or attributes. Moreover, the association of the aroma characteristics of baijiu and shochu with their volatile compound development by the determination of selective ingredients has been examined. Understanding the current research progress can potentially facilitate the improvement in the aroma characteristics of soju.
Preparation of Ovalbumin/Xanthan Gum/Chitosan Pickering Emulsion Oleogel Added with Amomum villosum Lour. Extract and Its Application in Cookies
Authors: Xue Shan , Zhao Jilong , Xiong Zhouyi , Huang Jie
Published: October 2024

In this study, a new oleogel system was constructed and used as a fat substitute in the processing of cookies. The preparation process of Amomum villosum Lour. extract (AVE) was optimized based on antioxidant activity and yield firstly. Then, the AVE, ovalbumin, chitosan, and xanthan gum were used as raw materials to prepare a composite Pickering emulsion oleogel. The results showed that when the concentration of AVE, chitosan, and XG were 0.1%, 2.5%, and 0.3%, respectively, a stable and uniformly distributed Pickering emulsion oleogel was formed. In this case, the particle size of the composite oleogel was relatively small; the absolute value of zeta potential was higher; the microstructure was more stable, with less aggregation and flocculation; and the thermal stability and freeze–thaw stability were excellent. In addition, the addition of AVE enhanced the gel properties of the oleogel and had good solid-like properties, and strengthened the binding force, as well as the oxidation stability, making the whole system more stable. In addition, the results of the application of the composite oleogel in the cookies showed that the AVE–ovalbumin/xanthan gum/chitosan Pickering emulsion oleogel had similar sensory and texture properties to the butter group. The addition of AVE can delay the crispness, cohesiveness, hardness, and the rate of malondialdehyde formation in cookies during storage. In conclusion, the AVE–ovalbumin/xanthan gum/chitosan Pickering emulsion oleogel had good physicochemical stability and showed great potential in replacing saturated fat (butter) in baking products (cookies).
Double-Network Hydrogel 3D BioPrinting Biocompatible with Fibroblast Cells for Tissue Engineering Applications
Authors: Greco Immacolata , Machrafi Hatim , Iorio Carlo S.
Published: October 2024

The present study examines the formulation of a biocompatible hydrogel bioink for 3D bioprinting, integrating poly(ethylene glycol) diacrylate (PEGDA) and sodium alginate (SA) using a double-network approach. These materials were chosen for their synergistic qualities, with PEGDA contributing to mechanical integrity and SA ensuring biocompatibility. Fibroblast cells were included in the bioink and printed with a Reg4Life bioprinter employing micro-extrusion technology. The optimisation of printing parameters included needle size and flow velocities. This led to precise structure development and yielded results with a negligible deviation in printed angles and better control of line widths. The rheological characteristics of the bioink were evaluated, demonstrating appropriate viscosity and shear-thinning behaviour for efficient extrusion. The mechanical characterisation revealed an average compressive modulus of 0.38 MPa, suitable for tissue engineering applications. The printability of the bioink was further confirmed through the evaluations of morphology and diffusion rates, confirming structural integrity. Biocompatibility assessments demonstrated a high cell viability rate of 82.65% following 48 h of incubation, supporting the bioink’s suitability for facilitating cell survival. This study introduced a reliable technique for producing tissue-engineered scaffolds that exhibit outstanding mechanical characteristics and cell viability, highlighting the promise of PEGDA–SA hydrogels in bioprinting applications.
Whole Genome Analysis Reveals Evolutionary History and Introgression Events in Bale Monkeys
Authors: Seshadri Lakshmi , Atickem Anagaw , Zinner Dietmar , Roos Christian , Zhang Liye
Published: October 2024

Background/Objective: The Bale monkey (Chlorocebus djamdjamensis) is a threatened primate species endemic to Ethiopia and, in contrast to other members of the genus Chlorocebus, lives at high altitudes and feeds mainly on bamboo. Two populations of the species are present, one in continuous bamboo forest (CF) in the eastern part of the species’ range, and the other in fragmented forest (FF) in the western part. Based on mitochondrial DNA and phenotypic characteristics, previous studies have suggested introgression by parapatric congeners into the FF population but not into the CF population. The objective of this study was to gain insights into the evolutionary history of Bale monkeys and their potential genetic adaptations to high altitudes and for bamboo consumption. Methods: We sequenced the whole genomes of individuals from both populations and compared their genomes with those of the other five Chlorocebus species. We applied phylogenetic methods and conducted population demographic simulations to elucidate their evolutionary history. A genome-wide analysis was conducted to assess gene flow and identify mutations potentially associated with adaptations to high altitudes and for bamboo metabolism. Results: Our analyses revealed Bale monkeys as the sister clade to Chlorocebus aethiops and showed that gene flow occurred between C. aethiops and FF but not between C. aethiops and CF. In addition, we detected non-synonymous mutations in genes potentially associated with the adaptation to high altitudes (EPAS1) in both populations and with the adaptation for bamboo metabolism (TAS2R16, MPST, and TST) mainly in the CF population. Conclusions: Our study provides insights into the evolutionary history of a threatened primate species and reveals the genetic basis for its adaptions to unique environments and for diet specialization.
Exploring Genetic Variation and Trait Correlations in ‘Shiqian Taicha’ Tea Based on Comprehensive Analyses of Morphological and Biochemical Diversity
Authors: Lin Kaiqin , Wang Anran , Li Yuexin , Li Lulu , Wei Jie , Zhou Fuyu , Zhao Degang , Yan Donghai
Published: October 2024

This study explores the genetic variation and trait correlations within a collection of 52 ‘Shiqian Taicha’ tea germplasms originating from Shiqian County, Guizhou Province, China. The ‘Shiqian Taicha’ landraces exhibit substantial genetic diversity and are characterized by unique morphological and biochemical attributes. The Shannon-Weaver diversity index (H’) values for the morphological traits ranged from 0.37 to 2.06, with an average value of 1.02, which suggests a greater level of genetic diversity than those of other domestic tea germplasms. The biochemical analysis demonstrated considerable variation, with coefficients of variation (CVs) for biochemical components ranging from 3.73 to 54.05% (mean CV: 20.35%). In addition, 25 germplasms had epigallocatechin-3-gallate (EGCG) contents ≥ 10%. The correlation analysis revealed significant associations between morphological traits and biochemical components, with particularly positive correlations between the leaf texture and key biochemical components such as total catechins (TC) and EGCG (p < 0.01). The clustering analysis, which was based on morphological and biochemical profiles, further categorized the tea germplasms into distinct groups. Notably, SWD-G, SLD005, SWXD005, and SWD004 were identified as superior germplasms with comprehensive biochemical qualities and high EGCG contents. These unique resources have potential for the cultivation of specific tea varieties with regional characteristics.
Genome-Wide Identification of UGT Genes and Analysis of Their Expression Profiles During Fruit Development in Walnut (Juglans regia L.)
Authors: Shi Danhua , Yang Jinyu , Li Gengyang , Zhou Yuanting , Yao Pei , Shi Yanyu , Tian Jieyun , Zhang Xiaojun , Liu Qunlong
Published: October 2024

Walnut (Juglans regia L.) possesses the ability to prevent coronary heart disease and promote cardiovascular health. This ability can be attributed to their rich content of polyphenols, particularly flavonoids. The biosynthesis of flavonoids is reliant on the catalytic activity of uridine diphosphate glycosyltransferase (UGT). However, the identification of UGTs in walnut has not been reported. In the current study, a total of 124 UGT genes containing the PSPG box were identified from the walnut genome. Based on phylogenetic analysis, the 124 UGTs could be classified into 16 distinct groups, which exhibited an uneven distribution across the 16 chromosomes. Subcellular localization prediction analysis revealed that approximately 78.23% of walnut UGT proteins were predominantly localized in the cytoplasmic compartment. Furthermore, motif annotation confirmed that motifs 1, 2, and 3 represented conserved structural features within UGT proteins, while interestingly, around 56.5% of walnut UGT members lacked introns. Through the analysis of promoter cis-regulatory elements, it was revealed that JrUGTs are involved in photoresponse, hormonal regulation, and other physiological responses. In conjunction with transcriptome analysis and quantitative expression, approximately 39% of UGT genes in walnut exhibited high expression levels during early fruit development. Correlation analysis between UGT genes’ expression and phenolic content in walnut indicated that JrUGT6, JrUGT38, JrUGT39, JrUGT58, JrUGT69, JrUGT75, and JrUGT82 might be involved in phenolic biosynthesis in walnut. This comprehensive study provides an overview of the UGT genes in walnut, serving as a valuable reference and theoretical foundation for further investigations into the biological functions of JrUGTs in flavonoid biosynthesis.
Biomarkers of Pesticide Exposure in a Traditional Brazilian Amazon Community
Authors: Fona Cristal M. T. , Miranda Antonio M. M. , Jesus Maria I. , Silva Viviane M. , Rocha Cássia C. S. , Costa Amilton C. G. , Mendes Rosivaldo A.
Published: October 2024

In 2008, Brazil became the country with the highest pesticide use in the world, with over one billion liters of pesticides applied to crops in 2009. The impacts of these products on public health are wide-ranging. Vast territories are affected, involving different population groups, such as workers in various fields of activity, the population that consumes contaminated food, and people living around factories, such as traditional communities. This study aimed to assess human exposure to pesticides through epidemiological and laboratory data of residents of the Santo Antônio quilombola community in Concórdia do Pará, Amazon region, Brazil. Epidemiological data were collected using a semi-structured questionnaire, which included factors such as sex, age, length of residence, and level of exposure to pesticides. The modified Ellman method was used to assess the activity of cholinesterases, and flow cytometry was performed for cytokine analysis. Analysis of collected blood samples showed that, in most cases, there was no significant reduction in the activity of acetylcholinesterase (AChE) and butyrylcholinesterase (BChE) compared to other studies in the scientific literature. Meanwhile, there was an increase in the levels of IFN-γ cytokines, especially IL-6, in all groups. The findings of this study highlight the urgent need for a comprehensive monitoring program, considering that some conditions other than pesticide exposure can alter the activities of the biomarkers used in this study.
Waterborne Gastrointestinal Diseases and Child Mortality: A Study of Socioeconomic Inequality in Mexico
Authors: Morales-Novelo Jorge Armando , Rodríguez-Tapia Lilia , Medina-Rivas Carolina Massiel , Revollo-Fernández Daniel Alfredo
Published: October 2024

In Mexico, 1.9% of child mortality among children aged 3 to 15 years is attributed to waterborne gastrointestinal diseases (WGD). This study employs a generalized bivariate logit econometric model to simulate the relationships between mortality risks and seven explanatory variables. Based on the model results and sensitivity analysis of the estimated parameters, a set of policies was designed to reduce the likelihood of child mortality. The proposed strategy involves implementing the following public policies, primarily targeting communities with extreme and high marginalization: increasing access to drinking water, improving housing conditions, expanding parental basic education coverage, and providing nutrition and healthcare to children from an early age. The findings reveal that children who speak an indigenous language face a mortality risk from WGD that is three times higher than those who do not, while children who receive medical services have a 29% lower risk of mortality compared to those who do not have access to them. It is recommended to offer free medical care in indigenous languages within high-marginalization communities. The combined impact of these policies is expected to significantly reduce child mortality due to WGD.