bluuebunny/crossref_metadata_2025 huggingface dataset:
Developed and Intelligent Structure of a Control for PV Water Treatment System
Authors: Zitouni Naoufel , Gammoudi Rabiaa , Attafi Rim , Mezgahni Dhafer
Published: September 2023

The subject of this work is a UV-irradiated water disinfection prototype intended for use in rural areas where access to water is difficult. Given the favorable climatic conditions of our country, the use of photovoltaic panels as a source of energy is particularly interesting, and has relevance in regions with a similar climate. PV energy being a fluctuating source that influences water disinfection operations, we have developed a database to distribute the energy available to the loads (UV lamps, electric pumps) in order to ensure a better quality of the water. This database is used in deep learning to model water disinfection phenomena. This method is able to adjust the speed instructions of the motor pump (therefore the flow rate) and the UV irradiation according to the energy available to ensure optimal water quality. Several other techniques have been implemented to control the instructions generated by the deep learning developed, to control the motor, the inverter and the DC/DC converter (IRFOC, SVPWM, sliding mode). All these approaches are tested in real time and they represent good results in terms of water treatment control. The effectiveness of these types of control is proven by the results obtained.
Integrated Geophysical and Geochemical Analyses for Assessment of Potential Coal Prospects in Tirah Area, Khyber Pakhtunkhwa, Pakistan
Authors: Sajid Muhammad , Ali Liaqat , Khan Muhammad Younis , Khan Majid , Qadri S. M. Talha
Published: September 2023

This study presents a comprehensive investigation of the Paleocene coal in the Tirah area, District Khyber, Khyber Pakhtunkhwa, Pakistan, utilizing onsite Electrical Resistivity Tomography (ERT) and Ground Penetrating Radar (GPR) experiments combined with geochemical analyses of obtained coal-rock samples. ERT and GPR profiles, along with geochemical data, were collected and meticulously analyzed to assess the potential and quality of coal seams based on coal ranking, aiming to delineate their spatial distribution and future exploitation prospects. The study reveals a wide range of resistivity values, spanning from 8.93 Ωm to 2472 Ωm. The uppermost layer, comprising silt and clay with water saturation, exhibits resistivity values ranging from 8.93 Ωm to 50 Ωm. The subsequent stratum, characterized by wet sandstone with minor shale and clay, has resistivity values between 50 Ωm and 95.3 Ωm. Significantly, the zone with resistivity values between 95.3 Ωm and 800 Ωm is identified as the probable host of the coal seams. Based on the results, the coal seams are estimated to exist at depths ranging from 14 to 23 m, with resistivity values between 95.3 Ωm and 800 Ωm. GPR results further corroborate these findings, revealing coal-bearing strata at various depths, thus confirming the ERT results. Additionally, proximate and ultimate analysis provided insights into the quality of the coal, with average concentration values of moisture content (6.95%), ash content (22.12%), volatile matter (28.55%), fixed carbon (42.40%), carbon content (55.35%), hydrogen (4.7%), nitrogen (0.95%), sulfur (4.82%), and oxygen (10.06%). Comparative analyses of the obtained results with local coals from the Salt Range in Punjab, Pakistan, and coal from Ogboyaga, Nigeria, confirm that the studied coal ranks as sub-bituminous. This comprehensive assessment offers valuable insights into the potential and quality of Paleocene coal in the studied region and is applicable to other areas with similar geological settings.
On the Added Value of State-of-the-Art Probabilistic Forecasting Methods Applied to the Optimal Scheduling of a PV Power Plant with Batteries
Authors: Alvarenga Rafael , Herbaux Hubert , Linguet Laurent
Published: September 2023

Efforts have been made to develop methods to quantify the uncertainty related to the power production of renewable energy power plants, allowing producers to ensure more reliable engagements related to their future power delivery. Even though diverse probabilistic approaches have been proposed in the literature, giving promising results, the added value of adopting such methods is still unclear. This paper comprehensively assesses the profits obtained when probabilistic forecasts generated with state-of-the-art methods are fed into a stochastic programming decision-making model to optimally schedule an existing PV power plant operating in highly unstable weather. Different representative probabilistic forecasting methods are assessed and compared against deterministic forecasts submitted to varying levels of uncertainty, used to schedule the power plant in standalone operation and hybrid operation with batteries. The main findings reveal that although probabilistic forecasts offer potential benefits in handling uncertainty and utilizing battery assets to mitigate forecast errors, deterministic forecasts consistently yield higher profits than probabilistic forecasts. It is shown that this disparity is primarily attributed to the scenario diversity present in probabilistic forecasts, which leads to over-conservative decisions and the loss of temporal correlation with PV power production variations, resulting in increased imbalances and penalties.
Investigation of the Segregation of Radiocesium from Contaminated Aqueous Waste Using AMP-PAN Extraction Chromatography
Authors: Abbas Taisir Khudhair , Abdulghafoor Thaeerh Tariq , Aziz Ali Hassan , Al-Saadi Saad , Nafae Takrid Munam , Rashid Khalid Turki , Alsalhy Qusay F.
Published: September 2023

Removing the hazardous and unstable radioactive isotopes has been considered an arduous task, though they are in minimal concentrations. Cesium-137 (137Cs+) is a primary fission product produced by nuclear processes. Even at low concentrations, such radioactive material is a menacing source of contaminants for the environment. The current study aims to separate 137Cs+ from a real contaminated aqueous solution via an ion exchange mechanism using ammonium molybdophosphate–polyacrylonitrile (AMP-PAN) resin loaded in an extraction chromatographic column that possesses considerable selectivity toward cesium ion (Cs+) due to the specific ion exchange between 137Cs+ and NH4+. Additionally, the proposed interaction mechanism between 137Cs+ with APM-PAN resin has been illustrated in this study. The results disclosed that the optimum efficient removal of 137Cs+ (91.188%) was obtained by the AMP-PAN resin using 2 g·L−1, while the distribution adsorption coefficient (129.359 mL·g−1) was at pH 6. The isothermal adsorption process was testified through the Langmuir and Freundlich models. The estimated maximum adsorption capacity reached 140.81 ± 21.3 mg·g−1 for the Freundlich isotherm adsorption model. Finally, AMP-PAN resin could eliminate 137Cs+ from water effectively through adsorption.
A Model-Aware Comprehensive Tool for Battery Energy Storage System Sizing
Authors: Spiller Matteo , Rancilio Giuliano , Bovera Filippo , Gorni Giacomo , Mandelli Stefano , Bresciani Federico , Merlo Marco
Published: September 2023

This paper presents a parametric procedure to size a hybrid system consisting of renewable generation (wind turbines and photovoltaic panels) and Battery Energy Storage Systems (BESS). To cope with the increasing installation of grid-scale BESS, an innovative, fast and flexible procedure for evaluating an efficient size for this asset has been developed. The tool exploits a high-fidelity empirical model to assess stand-alone BESS or hybrid power plants under different service stacking configurations. The economic performance has been evaluated considering the revenue stacking that occurs when participating in up to four distinct energy markets and the degradation of the BESS performances due to both cycle- and calendar-aging. The parametric nature of the tool enables the investigation of a wide range of system parameters, including novel BESS control logic, market prices, and energy production. The presented outcomes detail the techno-economic performances of a hybrid system over a 20-year scenario, proposing a sensitivity analysis of both technical and economic parameters. The case study results highlight the necessity of steering BESS investment towards the coupling of RES and accurate planning of the service stacking. Indeed, the implementation of a storage system in an energy district improves the internal rate of return of the project by up to 10% in the best-case scenario. Moreover, accurate service stacking has shown a boost in revenues by up to 44% with the same degradation.
Risk Reliability Assessment of Transmission Lines under Multiple Natural Disasters in Modern Power Systems
Authors: Fan Rongquan , Zeng Wenhui , Ming Ziqiang , Zhang Wentao , Huang Ruirui , Liu Junyong
Published: September 2023

Climate change has led to more frequent extreme weather events, and various natural disasters have posed risks to the operation of transmission lines. Line failures caused by natural disasters are unpredictable and bring additional maintenance work. Therefore, this paper proposes a transmission line risk reliability assessment method that considers the combined effects of multiple natural disasters. This method establishes a theory of disaster risk quantification that considers the probability of the occurrence of the risk, the degree of the impact of the risk on the line, and the severity of the risk disaster. The risk weights for different natural disasters are calculated by combining a hierarchical analysis and entropy weighting methods. The example of a transmission line risk assessment under the combined effects of multiple natural disasters for a Sichuan region verifies the proposed method’s effectiveness. The results show that the method effectively assesses the operational risk to transmission lines under the combined effects of natural disasters. The assessment results can be used for disaster recovery and line risk prevention.
Sensory-Guided Isolation, Identification, and Active Site Calculation of Novel Umami Peptides from Ethanol Precipitation Fractions of Fermented Grain Wine (Huangjiu)
Authors: Chang Rui , Zhou Zhilei , Dong Yong , Xu Yuezheng , Ji Zhongwei , Liu Shuangping , Mao Jian
Published: September 2023

Huangjiu is rich in low-molecular-weight peptides and has an umami taste. In order for its umami peptides to be discovered, huangjiu was subjected to ultrafiltration, ethanol precipitation, and macroporous resin purification processes. The target fractions were gathered according to sensory evaluation. Subsequently, we used peptidomics to identify the sum of 4158 peptides in most umami fractions. Finally, six novel umami peptides (DTYNPR, TYNPR, SYNPR, RFRQGD, NFHHGD, and FHHGD) and five umami-enhancing peptides (TYNPR, SYNPR, NFHHGD, FHHGD, and TVDGPSH) were filtered via virtual screening, molecular docking, and sensory verification. Moreover, the structure–activity relationship was discussed using computational approaches. Docking analysis showed that all umami peptides tend to bind with T1R1 through hydrogen bonds and hydrophobic forces, which involve key residues HIS71, ASP147, ARG151, TYR220, SER276, and ALA302. The active site calculation revealed that the positions of the key umami residues D and R in the terminal may cause taste differences in identified peptides.
Heat Flux Analysis and Assessment of Drying Kinetics during Lyophilization of Fruits in a Pilot-Scale Freeze Dryer
Authors: Sedmak Ivan , Može Matic , Kambič Gorazd , Golobič Iztok
Published: September 2023

Vacuum freeze-drying as a process for achieving high product quality has attracted increasing attention in the last decade. Particularly in the pharmaceutical field and food processing industries, lyophilization can produce high-quality products compared to samples dried by conventional methods. Despite its benefits, lyophilization is a time-consuming and costly process that requires optimization of a number of process parameters, including shelf temperature, chamber pressure, freezing rate, and process time. This paper reports on the implementation of heat flux measurements that allow noninvasive real-time determination of the endpoint of the primary drying stage as an essential parameter for the effective optimization of the overall drying time. Quantitative analysis of the drying kinetics of five fruits (kiwifruit, avocado, Asian pear, persimmon, and passion fruit) was assessed by comparing the heat flux and temperature profiles of samples during the lyophilization process. For a 24 h lyophilization cycle, average heat fluxes in the primary drying phase ranged from 250 to 570 W/m2. A significant correlation was found between the temperature and heat flux distributions at the estimated endpoint of the sublimation process and the corresponding transition into the secondary drying stage. Furthermore, good agreement was also found for the freezing phase. The use of real-time heat flux measurements proved to be a cost-effective experimental method to better understand the process variables in order to reduce the lyophilization cycle time and overall energy consumption.
Bioaccessibility Evaluation of Soymilk Isoflavones with Biotransformation Processing
Authors: Macedo Gabriela Alves , Caria Cíntia Rabelo e Paiva , Barbosa Paula de Paula Menezes , Mazine Marina Rodrigues , Gambero Alessandra
Published: September 2023

Soy isoflavones are considered important sources of bioactive compounds, but they are poorly absorbable, due to their large hydrophilic structures. Some biotransformation strategies have been used to convert the glycosidic form into aglycones, making them available for absorption. This study evaluated the potential of enzymatic and/or microbial fermentation combined bioprocesses in a soymilk extract before and after gastrointestinal in vitro digestion. Commercial β-glucosidase (ET) and a mix of commercial probiotics (F) containing Lactobacillus acidophilus, Lactobacillus casei, Lactococcus lactis, Bifidobacterium bifidum, and Bifidobacterium lactis were used to biotransform the soymilk phenolic extract. An isoflavone profile was identified using HPLC-DAD, total phenolic content was identified using the Folin–Ciocalteu test, and antioxidant capacity was identified using ORAC and FRAP. Soymilk enzymatically treated (ET) followed by microbial fermentation (ET + T) resulted in better conversion of glycosylated isoflavones (6-fold lower than control for daidzin and 2-fold for genistin) to aglycones (18-fold greater than control for dadzein and genistein). The total phenolic content was increased (3.48 mg/mL for control and 4.48 mg/mL for ET + T) and the antioxidant capacity was improved with treatments of ET + T (120 mg/mL for control and 151 mg/mL with ORAC) and with FRAP (285 µL/mL for control and 317 µL/mL). After the in vitro digestion, ET + T samples resulted in a higher content of genistein (two-fold higher than control); also, increases in the total phenolic content (2.81 mg/mL for control and 4.03 mg/mL for ET + T) and antioxidant capacity measured with ORAC were greater compared to undigested samples. In addition, the isolated microbial fermentation process also resulted in positive effects, but the combination of both treatments presented a synergistic effect on soy-based products.
Effect of Different Roughage Sources in Fermented Total Mixed Ration and Energy Intake on Meat Quality, Collagen Solubility, Troponin T Degradation, and Fatty Acids of Native Thai Cattle Longissimus Muscle
Authors: Lukkananukool Achara , Polyorach Sineenart , Sommart Kritapon , Chaosap Chanporn
Published: September 2023

The effects of roughage sources in the fermented total mixed ration (FTMR) and the level of energy intake on meat quality, collagen solubility, and troponin T degradation in longissimus thoracis (LT) muscle of native Thai cattle (NTC) were investigated. Results showed that roughage source affected fatty acid composition in the LT muscle (p < 0.05), as NTC fed Pakchong 1-Napier-based FTMR had higher monounsaturated fatty acid content and ω 6:ω 3 ratio. The high-energy ad libitum group had lower drip loss, lower shear force, and higher percent collagen solubility (p < 0.05). However, energy intake had no effect on troponin T degradation and fatty acid composition (p > 0.05). Longer aging of 14 days showed lower shear force values, higher collagen solubility, and troponin T degradation rate but higher cooking loss (p < 0.01). In conclusion, the meat quality of NTC could be improved by ad libitum feeding with NG-FTMR, as their meat had higher MUFA content, lower drip loss, lower shear force, and higher collagen solubility. In addition, the tenderness of NTC meat could be further improved by longer aging of 14 days post-mortem.
Preparation, Structural Characterization, and Stability of Low-Molecular-Weight Collagen Peptides–Calcium Chelate Derived from Tuna Bones
Authors: Zhong Yaqi , Zhou Yufang , Ma Mingzhu , Zhao Yadong , Xiang Xingwei , Shu Conghan , Zheng Bin
Published: September 2023

This study was conducted to prepare calcium chelate of low-molecular-weight tuna bone collagen peptides (TBCPLMW) with a high chelation rate and to identify its structural characteristics and stability. The optimum conditions for calcium chelation of TBCPLMW (TBCPLMW-Ca) were determined through single-factor experiments and response surface methodology, and the calcium-chelating capacity reached over 90% under the optimal conditions. The amino acid compositions implied that Asp and Glu played important roles in the formation of TBCPLMW-Ca. Structural characterizations determined via spectroscopic analyses revealed that functional groups such as -COO−, N-H, C=O, and C-O were involved in forming TBCPLMW-Ca. The particle size distributions and scanning electron microscopy results revealed that folding and aggregation of peptides were found in the chelate. Stability studies showed that TBCPLMW-Ca was relatively stable under thermal processing and more pronounced changes have been observed in simulated gastric digestion, presumably the acidic environment was the main factor causing the dissociation of the TBCPLMW-Ca. The results of this study provide a scientific basis for the preparation of a novel calcium supplement and is beneficial for comprehensive utilization of tuna bones.
Enhancing Kidney Transplant Care through the Integration of Chatbot
Authors: Garcia Valencia Oscar A. , Thongprayoon Charat , Jadlowiec Caroline C. , Mao Shennen A. , Miao Jing , Cheungpasitporn Wisit
Published: September 2023

Kidney transplantation is a critical treatment option for end-stage kidney disease patients, offering improved quality of life and increased survival rates. However, the complexities of kidney transplant care necessitate continuous advancements in decision making, patient communication, and operational efficiency. This article explores the potential integration of a sophisticated chatbot, an AI-powered conversational agent, to enhance kidney transplant practice and potentially improve patient outcomes. Chatbots and generative AI have shown promising applications in various domains, including healthcare, by simulating human-like interactions and generating contextually appropriate responses. Noteworthy AI models like ChatGPT by OpenAI, BingChat by Microsoft, and Bard AI by Google exhibit significant potential in supporting evidence-based research and healthcare decision making. The integration of chatbots in kidney transplant care may offer transformative possibilities. As a clinical decision support tool, it could provide healthcare professionals with real-time access to medical literature and guidelines, potentially enabling informed decision making and improved knowledge dissemination. Additionally, the chatbot has the potential to facilitate patient education by offering personalized and understandable information, addressing queries, and providing guidance on post-transplant care. Furthermore, under clinician or transplant pharmacist supervision, it has the potential to support post-transplant care and medication management by analyzing patient data, which may lead to tailored recommendations on dosages, monitoring schedules, and potential drug interactions. However, to fully ascertain its effectiveness and safety in these roles, further studies and validation are required. Its integration with existing clinical decision support systems may enhance risk stratification and treatment planning, contributing to more informed and efficient decision making in kidney transplant care. Given the importance of ethical considerations and bias mitigation in AI integration, future studies may evaluate long-term patient outcomes, cost-effectiveness, user experience, and the generalizability of chatbot recommendations. By addressing these factors and potentially leveraging AI capabilities, the integration of chatbots in kidney transplant care holds promise for potentially improving patient outcomes, enhancing decision making, and fostering the equitable and responsible use of AI in healthcare.
Phylogeny of PmCCD Gene Family and Expression Analysis of Flower Coloration and Stress Response in Prunus mume
Authors: Ding Aiqin , Bao Fei , Cheng Wenhui , Cheng Tangren , Zhang Qixiang
Published: September 2023

The CCD gene family plays a crucial role in the cleavage of carotenoids, converting them into apocarotenoids. This process not only impacts the physiology and development of plants but also enhances their tolerance toward different stresses. However, the character of the PmCCD gene family and its role in ornamental woody Prunus mume remain unclear. Here, ten non-redundant PmCCD genes were identified from the P. mume genome, and their physicochemical characteristics were predicted. According to the phylogenetic tree, PmCCD proteins were classified into six subfamilies: CCD1, CCD4, CCD7, CCD8, NCED and CCD-like. The same subfamily possessed similar gene structural patterns and numbers of conserved motifs. Ten PmCCD genes were concentrated on three chromosomes. PmCCD genes exhibited interspecific collinearity with P. armeniaca and P. persica. Additionally, PmCCD genes had obvious specificity in different tissues and varieties. Compared with white-flowered ‘ZLE’, PmCCD1 and PmCCD4 genes were low-expressed in ‘HJH’ with yellow petals, which suggested PmCCD1 and PmCCD4 might be related to the formation of yellow flowers in P. mume. Nine PmCCD genes could respond to NaCl or PEG treatments. These genes might play a crucial role in salt and drought resistance in P. mume. Moreover, PmVAR3 and PmSAT3/5 interacted with PmCCD4 protein in yeast and tobacco leaf cells. This study laid a foundation for exploring the role of the PmCCD gene family in flower coloration and stress response in P. mume.
mAb-Functionalized Biomimetic MamC-Mediated-Magnetoliposomes as Drug Delivery Systems for Cancer Therapy
Authors: Oltolina Francesca , Santaella Escolano Maria del Carmen , Jabalera Ylenia , Prat Maria , Jimenez Lopez Concepcion
Published: September 2023

In cancer therapy, new therapeutic nanoformulations able to mediate targeted chemotherapy are required. Recently, biomimetic magnetic nanoparticles (BMNPs) mediated by MamC, a magnetosome protein from Magnetococcus marinus MC-1, have proven, in vitro and in vivo, to be effective drug nanocarriers (following the application of an external gradient magnetic field) and to allow combination with hyperthermia. However, these nanoassemblies require further optimization to improve cytocompatibility, stability and active targeting ability. Herein, we describe the production of the magnetoliposomes (LP) embedding BMNPs functionalized (or not) with doxorubicin (DOXO), [LP(+/−DOXO-BMNPs)], and their surface modification with the DO-24 mAb, which targets the human Met/HGF receptor’s ectodomain (overexpressed in many cancers). Nanoformulations were extensively characterized using TEM, DLS, FTIR and when tested in vitro, the lipid coating increased the colloidal stability and their biocompatibility, favoring the cellular uptake in cells overexpressing the cognate receptor. Indeed, the magnetoliposomes mAb-LP(+/−DOXO-BMNPs) exerted a specific active targeting ability by the presence of the mAb that preserved its immunocompetence. Both LP(BMNPs) and mAb-LP(BMNPs) were not toxic to cells, while +/−mAb-LP(DOXO-BMNPs) nanoformulations were indeed cytotoxic. Therefore, this study represents a proof of concept for the development of promising drug carriers for cancer therapy based on local chemotherapy directed by mAbs.
New Ethynylphenylborasilsesquioxanes—Their Reactivity and Behavior during Thermal Decomposition
Authors: Frydrych Miłosz , Sztorch Bogna , Przekop Robert E. , Marciniec Bogdan
Published: September 2023

In this paper, a new type of borasilsesquioxanes was synthesized through a condensation process, and its reactivity in catalytic hydrosilylation reactions with silanes, siloxanes, and silsesquioxanes was investigated. The obtained compounds were mostly obtained in >90% yield. They were fully characterized using spectroscopic (1H, 13C, 29Si NMR) and spectrometric (MALDI-TOF-MS) methods. The next stage of the research involved studying the thermogravimetric properties of the borasilsesquioxanes. By analyzing the different stages of decomposition using spectroscopic techniques (NMR, ATR-FTIR, Raman) and microscopic imaging, it was found that the structure of the borasilsesquioxanes changed during the pyrolysis process and polymer compounds were formed.
The Contribution of Lipidomics in Ovarian Cancer Management: A Systematic Review
Authors: Tzelepi Vasiliki , Gika Helen , Begou Olga , Timotheadou Eleni
Published: September 2023

Lipidomics is a comprehensive study of all lipid components in living cells, serum, plasma, or tissues, with the aim of discovering diagnostic, prognostic, and predictive biomarkers for diseases such as malignant tumors. This systematic review evaluates studies, applying lipidomics to the diagnosis, prognosis, prediction, and differentiation of malignant and benign ovarian tumors. A literature search was performed in PubMed, Science Direct, and SciFinder. Only publications written in English after 2012 were included. Relevant citations were identified from the reference lists of primary included studies and were also included in our list. All studies included referred to the application of lipidomics in serum/plasma samples from human cases of OC, some of which also included tumor tissue samples. In some of the included studies, metabolome analysis was also performed, in which other metabolites were identified in addition to lipids. Qualitative data were assessed, and the risk of bias was determined using the ROBINS-I tool. A total of twenty-nine studies were included, fifteen of which applied non-targeted lipidomics, seven applied targeted lipidomics, and seven were reviews relevant to our objectives. Most studies focused on the potential application of lipidomics in the diagnosis of OC and showed that phospholipids and sphingolipids change most significantly during disease development. In conclusion, this systematic review highlights the potential contribution of lipids as biomarkers in OC management.
Partial Loss of Function ABCA12 Mutations Generate Reduced Deposition of Glucosyl-Ceramide, Leading to Patchy Ichthyosis and Erythrodermia Resembling Erythrokeratodermia Variabilis et Progressiva (EKVP)
Authors: Terrinoni Alessandro , Sala Gabriele , Bruno Ernesto , Pitolli Consuelo , Minieri Marilena , Pieri Massimo , Gambacurta Alessandra , Campione Elena , Belardi Riccardo , Bernardini Sergio
Published: September 2023

Ichthyoses are genetically determined cornification disorders of the epidermis characterized by the presence of different degrees of scaling, hyperkeratosis, and erythroderma often associated with palmoplantar keratoderma. Different classifications of these diseases have been proposed, often based upon the involved genes and/or the clinical presentation. The clinical features of these diseases present some overlap of phenotypes among distinct genetic entities, depending mainly on the penetrance of mutations. In this study, using a clinical, genetic, and molecular approach, we analyzed a family with two affected members who had clinical and histological features resembling erythrokeratodermia variabilis (EKV) or a type of erythrodermic hyperkeratosis with palmoplantar keratoderma. Despite of the clinical presentation, we demonstrated that the affected patients were genetically double heterozygous for two different mutations in the ABCA12 gene, known to be responsible for harlequin ichthyosis. To explain the mild phenotype of our patients, we performed a molecular characterization of the skin. In the upper layers of the epidermis, the results showed a patchy presence of the glucosyl-ceramides (GlcCer), which is the lipid transported by ABCA12, fundamental in contributing to skin impermeability. Indeed, the two mutations detected do not completely abolish ABCA12 activity, indicating that the mild phenotype is due to a partial loss of function of the enzyme, thus giving rise to an intermediate phenotype resembling EKVP, due to a partial depletion of GlcCer deposition.
Genome-Wide Analysis of MBF1 Family Genes in Five Solanaceous Plants and Functional Analysis of SlER24 in Salt Stress
Authors: Xia Dongnan , Guan Lulu , Yin Yue , Wang Yixi , Shi Hongyan , Li Wenyu , Zhang Dekai , Song Ran , Hu Tixu , Zhan Xiangqiang
Published: September 2023

Multiprotein bridging factor 1 (MBF1) is an ancient family of transcription coactivators that play a crucial role in the response of plants to abiotic stress. In this study, we analyzed the genomic data of five Solanaceae plants and identified a total of 21 MBF1 genes. The expansion of MBF1a and MBF1b subfamilies was attributed to whole-genome duplication (WGD), and the expansion of the MBF1c subfamily occurred through transposed duplication (TRD). Collinearity analysis within Solanaceae species revealed collinearity between members of the MBF1a and MBF1b subfamilies, whereas the MBF1c subfamily showed relative independence. The gene expression of SlER24 was induced by sodium chloride (NaCl), polyethylene glycol (PEG), ABA (abscisic acid), and ethrel treatments, with the highest expression observed under NaCl treatment. The overexpression of SlER24 significantly enhanced the salt tolerance of tomato, and the functional deficiency of SlER24 decreased the tolerance of tomato to salt stress. SlER24 enhanced antioxidant enzyme activity to reduce the accumulation of reactive oxygen species (ROS) and alleviated plasma membrane damage under salt stress. SlER24 upregulated the expression levels of salt stress-related genes to enhance salt tolerance in tomato. In conclusion, this study provides basic information for the study of the MBF1 family of Solanaceae under abiotic stress, as well as a reference for the study of other plants.
Metabolomics Point out the Effects of Carfilzomib on Aromatic Amino Acid Biosynthesis and Degradation
Authors: Barla Ioanna , Efentakis Panagiotis , Lamprou Sofia , Gavriatopoulou Maria , Dimopoulos Meletios-Athanasios , Terpos Evangelos , Andreadou Ioanna , Thomaidis Nikolaos , Gikas Evangelos
Published: September 2023

(1) Carfilzomib (Cfz) is an antineoplastic agent indicated for the treatment of multiple myeloma. However, its beneficial action is attenuated by the occurrence of cardiotoxicity and nephrotoxicity as the most common adverse effects. Presently, there is well-established knowledge on the pathomechanisms related to these side effects; however, the research on the metabolic alterations provoked by the drug is limited. (2) An in vivo simulation of Cfz-induced toxicity was developed in (i) Cfz-treated and (ii) control mice. An RP-HRMS-based protocol and an advanced statistical treatment were used to investigate the impact of Cfz on the non-polar metabolome. (3) The differential analysis classified the Cfz-treated and control mice and resulted in a significant number of identified biomarkers with AUC > 0.9. The drug impaired the biosynthesis and degradation of aromatic amino acids (AAA) and led to alterations of uremic toxins in the renal and urine levels. Furthermore, the renal degradation of tryptophan was affected, inducing its degradation via the kynurenine pathway. (4) The renal levels of metabolites showed impaired excretion and degradation of AAAs. Cfz was, finally, correlated with the biosynthesis of renal dopamine, explaining the biochemical causes of water and ion retention and the increase in systolic pressure.
Multimodal OCT Control for Early Histological Signs of Vulvar Lichen Sclerosus Recurrence after Systemic PDT: Pilot Study
Authors: Potapov Arseniy , Matveev Lev , Moiseev Alexander , Sedova Elena , Loginova Maria , Karabut Maria , Kuznetsova Irina , Levchenko Viktoriya , Grebenkina Elena , Gamayunov Sergey , Radenska-Lopovok Stefka , Sirotkina Marina , Gladkova Natalia
Published: September 2023

Photodynamic therapy (PDT) is a modern treatment for severe or treatment-resistant vulvar lichen sclerosus (VLS). The chronic and recurrent nature of VLS requires control of recurrences at an early stage. In this paper, a non-invasive multimodal optical coherence tomography (OCT) method was used to control for early histological signs of VLS recurrence after systemic PDT using Photodithazine®. To interpret the OCT data, a histological examination was performed before PDT and 3 months after PDT. Two groups of patients were identified: with early histological signs of VLS recurrence (Group I, n = 5) and without histological signs of VLS recurrence (Group II, n = 6). We use structural OCT, OCT angiography, and OCT lymphangiography throughout 6 months after PDT to visually assess the skin components and to quantitatively assess the dermis by calculating the depth-resolved attenuation coefficient and the density of blood and lymphatic vessels. The OCT data assessment showed a statistically significant difference between the patient groups 3 months after PDT. In Group II, all the studied OCT parameters reached maximum values by the 3rd month after PDT, which indicated recovery of the skin structure. At the same time, in Group I, the values of OCT parameters did not approach the values those in Group II even after 6 months. The obtained results of multimodal OCT can be used for non-invasive control of early histological recurrence of VLS after systemic PDT and for adjusting treatment tactics in advance, without waiting for new clinical manifestations of the disease.
The Effect of Antimicrobial Photodynamic Inactivation on the Protein Profile of Dormant Mycolicibacterium smegmatis Containing Endogenous Porphyrins
Authors: Shashin Denis M. , Demina Galina R. , Linge Irina A. , Vostroknutova Galina N. , Kaprelyants Arseny S. , Savitsky Alexander P. , Shleeva Margarita O.
Published: September 2023

During transition into a dormant state, Mycolicibacterium (Mycobacterium) smegmatis cells are able to accumulate free porphyrins that makes them sensitive to photodynamic inactivation (PDI). The formation of dormant cells in a liquid medium with an increased concentration of magnesium (up to 25 mM) and zinc (up to 62 µM) resulted in an increase in the total amount of endogenous porphyrins in dormant M. smegmatis cells and their photosensitivity, especially for bacteria phagocytosed by macrophages. To gain insight into possible targets for PDI in bacterial dormant mycobacterial cells, a proteomic profiling with SDS gel electrophoresis and mass spectrometry analysis were conducted. Illumination of dormant forms of M. smegmatis resulted in the disappearance of proteins in the separating SDS gel. Dormant cells obtained under an elevated concentration of metal ions were more sensitive to PDI. Differential analysis of proteins with their identification with MALDI-TOF revealed that 45.2% and 63.9% of individual proteins disappeared from the separating gel after illumination for 5 and 15 min, respectively. Light-sensitive proteins include enzymes belonging to the glycolytic pathway, TCA cycle, pentose phosphate pathway, oxidative phosphorylation and energy production. Several proteins involved in protecting against oxygen stress and protein aggregation were found to be sensitive to light. This makes dormant cells highly vulnerable to harmful factors during a long stay in a non-replicative state. PDI caused inhibition of the respiratory chain activity and destroyed enzymes involved in the synthesis of proteins and nucleic acids, the processes which are necessary for dormant cell reactivation and their transition to multiplying bacteria. Because of such multiple targeting, PDI action via endogenous porphyrins could be considered as an effective approach for killing dormant bacteria and a perspective to inactivate dormant mycobacteria and combat the latent form of mycobacteriosis, first of all, with surface localization.
Extracellular Matrix and Cancer: An Intricate Affair
Authors: Mongiat Maurizio
Published: September 2023

In complex multicellular eukaryotes, the extracellular matrix (ECM) is an essential component of the organism, not only providing structure to the tissues, but also granting cellular cooperation through the engagement of an intricate crosstalk between all cell types [...]
Recovering What Matters: High Protein Recovery after Endotoxin Removal from LPS-Contaminated Formulations Using Novel Anti-Lipid A Antibody Microparticle Conjugates
Authors: Casonato Melo Cristiane , Fux Alexandra C. , Himly Martin , Bastús Neus G. , Schlahsa Laura , Siewert Christiane , Puntes Victor , Duschl Albert , Gessner Isabel , Fauerbach Jonathan A.
Published: September 2023

Endotoxins or lipopolysaccharides (LPS), found in the outer membrane of Gram-negative bacterial cell walls, can stimulate the human innate immune system, leading to life-threatening symptoms. Therefore, regulatory limits for endotoxin content apply to injectable pharmaceuticals, and excess LPS must be removed before commercialization. The majority of available endotoxin removal systems are based on the non-specific adsorption of LPS to charged and/or hydrophobic surfaces. Albeit effective to remove endotoxins, the lack of specificity can result in the unwanted loss of essential proteins from the pharmaceutical formulation. In this work, we developed microparticles conjugated to anti-Lipid A antibodies for selective endotoxin removal. Anti-Lipid A particles were characterized using flow cytometry and microscopy techniques. These particles exhibited a depletion capacity > 6 ×103 endotoxin units/mg particles from water, as determined with two independent methods (Limulus Amebocyte Lysate test and nanoparticle tracking analysis). Additionally, we compared these particles with a non-specific endotoxin removal system in a series of formulations of increasing complexity: bovine serum albumin in water < insulin in buffer < birch pollen extracts. We demonstrated that the specific anti-Lipid A particles show a higher protein recovery without compromising their endotoxin removal capacity. Consequently, we believe that the specificity layer integrated by the anti-Lipid A antibody could be advantageous to enhance product yield.
Furmonertinib, a Third-Generation EGFR Tyrosine Kinase Inhibitor, Overcomes Multidrug Resistance through Inhibiting ABCB1 and ABCG2 in Cancer Cells
Authors: Wu Chung-Pu , Li Yen-Ching , Murakami Megumi , Hsiao Sung-Han , Lee Yun-Chieh , Huang Yang-Hui , Chang Yu-Tzu , Hung Tai-Ho , Wu Yu-Shan , Ambudkar Suresh V.
Published: September 2023

ATP-binding cassette transporters, including ABCB1 (P-glycoprotein) and ABCG2 (BCRP/MXR/ABCP), are pivotal in multidrug resistance (MDR) development in cancer patients undergoing conventional chemotherapy. The absence of approved therapeutic agents for multidrug-resistant cancers presents a significant challenge in effectively treating cancer. Researchers propose repurposing existing drugs to sensitize multidrug-resistant cancer cells, which overexpress ABCB1 or ABCG2, to conventional anticancer drugs. The goal of this study is to assess whether furmonertinib, a third-generation epidermal growth factor receptor tyrosine kinase inhibitor overcomes drug resistance mediated by ABCB1 and ABCG2 transporters. Furmonertinib stands out due to its ability to inhibit drug transport without affecting protein expression. The discovery of this characteristic was validated through ATPase assays, which revealed interactions between furmonertinib and ABCB1/ABCG2. Additionally, in silico docking of furmonertinib offered insights into potential interaction sites within the drug-binding pockets of ABCB1 and ABCG2, providing a better understanding of the underlying mechanisms responsible for the reversal of MDR by this repurposed drug. Given the encouraging results, we propose that furmonertinib should be explored as a potential candidate for combination therapy in patients with tumors that have high levels of ABCB1 and/or ABCG2. This combination therapy holds the potential to enhance the effectiveness of conventional anticancer drugs and presents a promising strategy for overcoming MDR in cancer treatment.
Roles of Nrf2/HO-1 and ICAM-1 in the Protective Effect of Nano-Curcumin against Copper-Induced Lung Injury
Authors: Sarawi Wedad S. , Alhusaini Ahlam M. , Alghibiwi Hanan K. , Alsaab Juman S. , Hasan Iman H.
Published: September 2023

Copper (Cu) is an essential trace element for maintaining normal homeostasis in living organisms. Yet, an elevated level of Cu beyond homeostatic capacity may lead to oxidative damage of cellular components in several organs, including the lungs. This work investigated the effects of curcumin (Curc) and nano-curcumin (nCurc) against Cu-induced lung injury, accenting the roles of oxidative stress, inflammation, and the nuclear factor erythroid 2-related factor/heme oxygenase-1 Nrf2/HO-1 pathway. Rats were challenged with 100 mg/kg of copper sulfate (CuSO4) while being treated with Curc or nCurc for 7 days. Cu-triggered lung oxidative stress detected as dysregulation of oxidative/antioxidant markers, a downregulation of Nrf-2/HO-1 signaling, and an increase in the inflammatory markers interleukin-6 (IL-6), tumor necrosis factor-alpha (TNF-α), and intracellular adhesion molecule-1 (ICAM-1). Additionally, it decreased the expression of lung-specific proteins, surfactant protein-C (SP-C), and mucin-1 (MUC-1), induced apoptosis, and caused changes in lung histology. Curc and nCurc alleviated CuSO4-induced lung injury by suppressing oxidative damage and inflammation and activating Nrf-2/HO-1. They also prevented apoptosis and restored the normal expression of SP-C and MUC-1. We concluded that nCurc exhibited superior efficacy compared with Curc in mitigating CuSO4-induced lung injury. This was associated with reduced oxidative stress, inflammation, and apoptotic responses and increased Nrf2/HO-1 signaling and expression of SP-C and MUC-1.
Insecticidal Effects of Receptor-Interference Isolated Bioactive Peptides on Fire Ant Colonies
Authors: Chinta Satya , Vander Meer Robert , O’Reilly Erin , Choi Man-Yeon
Published: September 2023

Receptor-interference (Receptor-i) is a novel technology used to identify bioactive peptides as agonists or antagonists against a specific receptor, primarily targeting G-protein-coupled receptors (GPCRs). Using Receptor-i methodology, we targeted the pheromone biosynthesis activating neuropeptide receptor (PBAN-R) of the red imported fire ant (Solenopsis invicta). Based on previous studies, we selected four bioactive peptides cyclized with two cysteines: CVKLGSHFC, CIQQGSHFC, CERVGSHFC, and CMARYMSAC, and we conducted small-scale feeding bioassays, measuring fire ant worker mortality. All peptides reduced ant survival; however, CMARYMSAC (MARY) and CIQQGSHFC (IQQG) were the most effective and were selected for feeding trials against large, fully functional fire ant field colonies containing queen, brood, and up to 8000 workers. At the end of the experiment, day 84, synthetic peptide MARY killed over 80% of the workers and two of four queens. IQQG killed over 70% of the workers and three of four queens. The surviving two MARY queens lost an average of 21% of their starting weight. The surviving IQQG queen lost 31% of its weight. In contrast, control colony queens gained an average of 11% of their starting weight. These results provide proof-of-concept for the Receptor-i technology and will synergize applications to other agricultural and medical pests.
Transcriptomic Analysis of Metarhizium anisopliae-Induced Immune-Related Long Non-Coding RNAs in Polymorphic Worker Castes of Solenopsis invicta
Authors: Zafar Junaid , Wu Hongxin , Xu Yating , Lin Liangjie , Kang Zehong , Zhang Jie , Zhang Ruonan , Lu Yongyue , Jin Fengliang , Xu Xiaoxia
Published: September 2023

Long non-coding RNAs (lncRNAs) represent a class of RNA molecules that do not encode proteins. Generally studied for their regulatory potential in model insects, relatively little is known about their immunoregulatory functions in different castes of eusocial insects, including Solenopsis invicta, a notoriously invasive insect pest. In the current study, we used Metarhizium anisopliae, an entomopathogenic fungus, to infect the polymorphic worker castes (Major and Minor Workers) and subjected them to RNA sequencing at different intervals (6, 24, and 48 h post-infection (hpi)). Comprehensive bioinformatic analysis identified 5719 (1869 known and 3850 novel) lncRNAs in all libraries. Genomic characteristics analysis showed that S. invicta lncRNAs exhibited structural similarities with lncRNAs from other eusocial insects, including lower exon numbers, shorter intron and exon lengths, and a lower expression profile. A comparison of lncRNAs in major and minor worker ants revealed that several lncRNAs were exclusively expressed in one worker caste and remained absent in the other. LncRNAs such as MSTRG.12029.1, XR_005575440.1 (6 h), MSTRG.16728.1, XR_005575440.1 (24 h), MSTRG.20263.41, and MSTRG.11994.5 (48 h) were only present in major worker ants, while lncRNAs such as MSTRG.8896.1, XR_005574239.1 (6 h), MSTRG.20289.8, XR_005575051.1 (24 h), MSTRG.20289.8, and MSTRG.6682.1 (48 h) were only detected in minor workers. Additionally, we performed real-time quantitative PCR and experimentally validated these findings. Functional annotation of cis-acting lncRNAs in major worker ants showed that lncRNAs targeted genes such as serine protease, trypsin, melanization protease-1, spaetzle-3, etc. In contrast, apoptosis and autophagy-related genes were identified as targets of lncRNAs in minor ants. Lastly, we identified several lncRNAs as precursors of microRNAs (miRNAs), such as miR-8, miR-14, miR-210, miR-6038, etc., indicating a regulatory relationship between lncRNAs, miRNAs, and mRNAs in antifungal immunity. These findings will serve as a genetic resource for lncRNAs in polymorphic eusocial ants and provide a theoretical basis for exploring the function of lncRNAs from a unique and novel perspective.
Amphibian-Derived Natural Anticancer Peptides and Proteins: Mechanism of Action, Application Strategies, and Prospects
Authors: Chen Qian , Wu Jing , Li Xiang , Ye Ziyi , Yang Hailong , Mu Lixian
Published: September 2023

Cancer is one of the major diseases that seriously threaten human life. Traditional anticancer therapies have achieved remarkable efficacy but have also some unavoidable side effects. Therefore, more and more research focuses on highly effective and less-toxic anticancer substances of natural origin. Amphibian skin is rich in active substances such as biogenic amines, alkaloids, alcohols, esters, peptides, and proteins, which play a role in various aspects such as anti-inflammatory, immunomodulatory, and anticancer functions, and are one of the critical sources of anticancer substances. Currently, a range of natural anticancer substances are known from various amphibians. This paper aims to review the physicochemical properties, anticancer mechanisms, and potential applications of these peptides and proteins to advance the identification and therapeutic use of natural anticancer agents.