bluuebunny/crossref_metadata_2025 huggingface dataset:
Identifying Resistance Gene Analogs Associated With Resistances to Different Pathogens in Common Bean
Authors: López Camilo E. , Acosta Iván F. , Jara Carlos , Pedraza Fabio , Gaitán-Solís Eliana , Gallego Gerardo , Beebe Steve , Tohme Joe
Published: May 2007

A polymerase chain reaction approach using degenerate primers that targeted the conserved domains of cloned plant disease resistance genes (R genes) was used to isolate a set of 15 resistance gene analogs (RGAs) from common bean (Phaseolus vulgaris). Eight different classes of RGAs were obtained from nucleotide binding site (NBS)-based primers and seven from not previously described Toll/Interleukin-1 receptor-like (TIR)-based primers. Putative amino acid sequences of RGAs were significantly similar to R genes and contained additional conserved motifs. The NBS-type RGAs were classified in two subgroups according to the expected final residue in the kinase-2 motif. Eleven RGAs were mapped at 19 loci on eight linkage groups of the common bean genetic map constructed at Centro Internacional de Agricultura Tropical. Genetic linkage was shown for eight RGAs with partial resistance to anthracnose, angular leaf spot (ALS) and Bean golden yellow mosaic virus (BGYMV). RGA1 and RGA2 were associated with resistance loci to anthracnose and BGYMV and were part of two clusters of R genes previously described. A new major cluster was detected by RGA7 and explained up to 63.9% of resistance to ALS and has a putative contribution to anthracnose resistance. These results show the usefulness of RGAs as candidate genes to detect and eventually isolate numerous R genes in common bean.
Pseudomonas syringae Responds to the Environment on Leaves by Cell Size Reduction
Authors: Monier J.-M. , Lindow S. E.
Published: May 2007

The length and volume of cells of the plant-pathogenic bacterium Pseudomonas syringae strain B728a were measured in vitro and with time after inoculation on bean leaf surfaces to assess both the effect of nutrient availability on the cell size of P. syringae and, by inference, the variability in nutrient availability in the leaf surface habitat. Cells of P. syringae harboring a green fluorescent protein marker gene were visualized by epifluorescence microscopy after recovery from leaves or culture and their size was estimated by analysis of captured digital images. The average cell length of bacteria grown on leaves was significantly smaller than that of cultured cells, and approached that of cells starved in phosphate buffer for 24 h. The average length of cells originally grown on King's medium B decreased from ≈ 2.5 to ≈ 1.2 μm by 7 days after inoculation on plants. Some decrease in cell size occurred during growth of cells on leaves and continued for up to 13 days after cell multiplication ceased. Although cultured cells exhibited a normal size distribution, the size of cells recovered from bean plants at various times after inoculation was strongly right-hand skewed and was described by a log-normal distribution. The skewness of the size distribution tended to increase with time after inoculation. The reduced cell size of P. syringae B728a on plants was readily reversible when recovered cells were grown in culture. Direct in situ measurements of cell sizes on leaves confirmed that most cells of P. syringae respond to the leaf environment by reducing their size. The spatial heterogeneity of cell sizes observed on leaves suggest that nutrient availability is quite variable on the leaf surface environment.
Aphid Abundance on Cereals in Autumn Predicts Yield Losses Caused by Barley yellow dwarf virus
Authors: Fabre F. , Dedryver C. A. , Leterrier J. L. , Plantegenest M.
Published: May 2007

Barley yellow dwarf virus (BYDV) damage to winter cereals and population dynamics of the aphid Rhopalosiphum padi during fall were monitored in fields during 10 years at various locations in the northern half of France. Logistic regression was used to examine whether a simple risk probability algorithm based only on the autumnal population dynamics of R. padi can accurately predict yield losses caused by BYDV and, therefore, the need for insecticide treatment. Results showed that the area under the curve of the percentage of plants infested by R. padi during autumn was highly significantly related to BYDV yield losses. Then, a cost/benefit analysis was performed to estimate the optimal decision threshold resulting in the lowest annual average costs of BYDV damage and control. A “model use” strategy allowed a reduction in the annual average costs of BYDV disease and control of up to 36% when compared with a “prophylactic spraying” strategy. The optimal decision threshold was highly sensitive to variation in disease prevalence. This property was used to propose an easy way to adapt the model to any production situation through the determination of the most accurate decision threshold.
Modeling the Survival of Two Soilborne Pathogens Under Dry Structural Solarization
Authors: Shlevin Eli , Saguy I. Sam , Mahrer Yitzhak , Katan Jaacov
Published: May 2007

Structural (space) solarization of a closed, empty greenhouse for sanitation involves dry heating to 60°C and higher and low relative humidity (RH), under a fluctuating temperature and RH regime. Survival of inocula of Fusarium oxysporum f. sp. radicis-lycopersici and Sclerotium rolfsii during structural solarization was studied for 4 years (total of 12 experiments) in an attempt to develop a dynamic model for expressing the thermal inactivation of the pathogens. After 20 days of exposure, the populations of F. oxysporum f. sp. radicis-lycopersici and S. rolfsii were reduced by 69 to 95% and by 47.5 to 100%, respectively. The Weibull distribution model was applied to describe pathogen survival. The Weibull rate parameter, b, was found to follow an exponential (for F. oxysporum f. sp. radicis-lycopersici) and the Fermi (for S. rolfsii) functions at constant temperatures. To improve the applicability of the model, fluctuating conditions of both temperature and RH were utilized. The Weibull distribution derivative, expressed as a function of temperature and moisture, was numerically integrated to estimate survival of inocula exposed to structural solarization. Deviations between experimental and calculated values derived from the model were quite small and the coefficient of determination (R2) values ranged from 0.83 to 0.99 in 9 of 12 experiments, indicating that ambient RH data should be considered. Structural solarization for sanitation could be a viable component in integrated pest management programs.
Modeling of Relationships Between Weather and Septoria tritici Epidemics on Winter Wheat: A Critical Approach
Authors: Pietravalle S. , Shaw M. W. , Parker S. R. , van den Bosch F.
Published: May 2007

Two models for predicting Septoria tritici on winter wheat (cv. Riband) were developed using a program based on an iterative search of correlations between disease severity and weather. Data from four consecutive cropping seasons (1993/94 until 1996/97) at nine sites throughout England were used. A qualitative model predicted the presence or absence of Septoria tritici (at a 5% severity threshold within the top three leaf layers) using winter temperature (January/February) and wind speed to about the first node detectable growth stage. For sites above the disease threshold, a quantitative model predicted severity of Septoria tritici using rainfall during stem elongation. A test statistic was derived to test the validity of the iterative search used to obtain both models. This statistic was used in combination with bootstrap analyses in which the search program was rerun using weather data from previous years, therefore uncorrelated with the disease data, to investigate how likely correlations such as the ones found in our models would have been in the absence of genuine relationships.
Genetic Analysis of a Pathogenic Erwinia sp. Isolated from Pear in Japan
Authors: Maxson-Stein Kimberly , McGhee Gayle C. , Smith James J. , Jones Alan L. , Sundin George W.
Published: May 2007

Four Erwinia strains, originally isolated in Japan from pear trees with bacterial shoot blight symptoms, were analyzed to determine their genetic relationship with Erwinia amylovora and E. pyrifoliae. When genomes were characterized with amplified fragment length polymorphism markers and by comparative groEL sequence analysis, the Japanese Erwinia sp. and South Korean E. pyrifoliae strains were placed in the same group, which was phylogenetically distinct from a group of 15 strains of E. amylovora. Sequencing of the 29,593-bp plasmid pEJ30 from Erwinia strain Ejp556 revealed that this plasmid was nearly identical to plasmid pEP36 from E. pyrifoliae and was closely related to the nontransferable ubiquitous plasmid pEA29 from E. amylovora. Twenty-one presumptive genes and their order in pEP36 were highly conserved in pEJ30; however, transposon Tn5394, which was present in pEP36, was not found in pEJ30. Short-sequence DNA repeats were conserved between pEJ30 and pEP36, and were different from short-sequence repeats in pEA29. Despite base-pair mismatches, primer pairs used in pEA29 polymerase chain reaction assays for E. amylovora amplified plasmid DNA from the Japanese Erwinia Ejp556 and Ejp562. Like E. pyrifoliae and a few strains of E. amylovora, Japanese Erwinia Ejp617 contained plasmids related to E. pyrifoliae ColE1-related plasmid pEP2.6. Based on these genetic analyses, we conclude that the Erwinia pathogen of pear in Japan is closely related to E. pyrifoliae and that both of these pathogens are demonstrably distinct from E. amylovora.
Genetic Structure of Field Populations of Begomoviruses and of Their Vector Bemisia tabaci in Pakistan
Authors: Simón Belén , Cenis José Luis , Beitia Francisco , Khalid Saif , Moreno Ignacio M. , Fraile Aurora , García-Arenal Fernando
Published: May 2007

The genetic structure of field populations of begomoviruses and their whitefly vector Bemisia tabaci in Pakistan was analyzed. Begomoviruses and B. tabaci populations were sampled from different crops and weeds in different locations in Punjab and Sindh provinces, in areas where cotton leaf curl disease (CLCuD) occurs or does not occur. Phylogenetic analysis based on nucleotide sequences of the intergenic region in the viral DNA-A provided evidence of two clusters of isolates: viruses isolated from species in the family Malvaceae, and viruses isolated from other dicotyledon families. Analysis of the capsid protein (CP) open reading frame grouped isolates into three geographical clusters, corresponding to isolates collected in Punjab, Sindh, or both provinces. Random amplified polymorphic DNA analyses of the B. tabaci population showed that intrapopulation diversity was high at both the local and regional scales. Sequence analysis of the mitocondrial cytochrome oxydase I (mt COI) gene showed that the B. tabaci population was structured into at least three genetic lineages corresponding to the previously described Indian, Southeast Asian, and Mediterranean-African clades. The Indian clade was present only in Punjab, the Mediterranean-African only in Sindh, and the Southeast Asian in both provinces. B. tabaci haplotypes of the Indian clade were found only in the Punjab, where CLCuD occurs. Hence, the geographical distribution of virus and vector genotypes may be correlated, because similar phylogenetic relationships were detected for the viral CP and the vector mt COI genes.
Cucumber mosaic virus Establishes Systemic Infection at Increased Temperature Following Viral Entrance Into the Phloem Pathway of Tetragonia expansa
Authors: Kobori Takashi , Osaki Takeshi , Ohki Satoshi T.
Published: May 2007

A potential regulatory site for Cucumber mosaic virus (CMV, pepo strain) movement necessary to establish systemic infection was identified through immunological and hybridization studies on Tetragonia expansa, which was systemically infected by CMV at 36°C but not at 24°C. In inoculated leaves, cell-to-cell movement of CMV was enhanced at 36°C compared with that observed at 24°C. CMV was distributed in the phloem cells of minor veins as well as epidermal and mesophyll cells at both 36 and 24°C. CMV was detected in the petioles of inoculated leaves, stems, and petioles of uninoculated upper leaves at 36°C, whereas CMV was detected only in the petioles of inoculated leaves and in stems at 24°C. CMV moved into the phloem and was transported to the stem within 24 h postinoculation (hpi) at 36°C. However, it did not accumulate in the petioles of the upper leaves until 36 hpi. In petioles of inoculated leaves at 24°C, CMV was detected in the external phloem but not in the internal phloem. From these results, we conclude that systemic infection is established after viral entrance into the phloem pathway in T. expansa at 36°C.
Tomato leaf curl Gujarat virus, a New Begomovirus Species Causing a Severe Leaf Curl Disease of Tomato in Varanasi, India
Authors: Chakraborty S. , Pandey P. K. , Banerjee M. K. , Kalloo G. , Fauquet C. M.
Published: May 2007

The biological and molecular properties of Tomato leaf curl Gujarat virus from Varanasi, India (ToLCGV-[Var]) were characterized. ToLCGV-[Var] could be transmitted by grafting and through whitefly transmission in a persistent manner. The full-length genome of DNA-A and DNA-B of ToLCGV-[Var] was cloned in pUC18. Sequence analysis revealed that DNA-A (AY190290) is 2,757 bp and DNA-B (AY190291) is 2,688 bp in length. ToLCGV-[Var] could infect and cause symptoms in tomato, pepper, Nicotiana benthamiana, and N. tabacum when partial tandem dimeric constructs of DNA-A and DNA-B were co-inoculated by particle bombardment. DNA-A alone also is infectious, but symptoms were milder and took longer to develop. ToLCGV-Var virus can be transmitted through sap inoculation from infected tomato plants to the above-mentioned hosts causing the same symptoms. Open reading frames (ORFs) in both DNA-A and DNA-B are organized similarly to those in other begomoviruses. DNA-A and DNA-B share a common region of 155 bp with only 60% sequence identity. DNA-B of ToLCGV-[Var] shares overall 80% identity with DNA-B of Tomato leaf curl New Delhi virus-Severe (ToLCNDV-Svr) and 75% with ToLCNDV-[Lucknow] (ToLCNDV-[Luc]). Comparison of DNA-A sequence with different begomoviruses indicates that ToLCGV-[Var] shares 84% identity with Tomato leaf curl Karnataka virus (ToLCKV) and 66% with ToLCNDV-Svr. ToLCGV-[Var] shares a maximum of 98% identity with another isolate of the same region (ToLCGV-[Mir]; AF449999) and 97% identity with one isolate from Gujarat (ToLCGV-[Vad]; AF413671). All three viruses belong to the same species that is distinct from all the other geminivirus species described so far in the genus Begomovirus of the family Geminiviridae. The name Tomato leaf curl Gujarat virus is proposed because the first sequence was taken from an isolate of Gujarat, India.
Osmotin and Thaumatin from Grape: A Putative General Defense Mechanism Against Pathogenic Fungi
Authors: Monteiro Sara , Barakat Mahmoud , Piçarra-Pereira Maria A. , Teixeira Artur R. , Ferreira Ricardo B.
Published: May 2007

Little information is available concerning the expression of pathogenesis-related (PR) proteins in grapevine (Vitis vinifera) and their effect properties on the major fungal pathogens of grape. A systematic study was performed on the effect of total or individual grape proteins on mycelial growth, spore germination, and germ tube growth of Uncinula necator, Phomopsis viticola, and Botrytis cinerea. Two proteins, identified as PR proteins by immunological methods and by N-terminal sequencing as osmotin and thaumatin-like protein, exhibited strong antifungal activities in vitro, blocking the growth of Phomopsis viticola and Botrytis cinerea mycelia. In addition, they inhibited spore germination and germ tube growth of U. necator, Phomopsis viticola, and Botrytis cinerea. The presence of both proteins displayed a synergistic effect. The expression of osmotin and thaumatin-like protein was induced in grapevine leaves and berries infected with U. necator and Phomopsis viticola. Thaumatin previously was thought to occur exclusively in berries. Immunoblot analyses revealed the accumulation of the two PR proteins in infected leaves and berries, supporting a role in vivo in increasing the resistance of grapevine to fungal attack.
Effect of Variable Temperature on Infection Severity of Podosphaera macularis on Hops
Authors: Mahaffee Walter F. , Turechek William W. , Ocamb Cynthia M.
Published: May 2007

The effect of variable temperature on the infection severity of Podosphaera macularis was investigated. Potted ‘Symphony’ hop plants were inoculated and exposed to different temperature regimes that included supraconducive temperatures (30 to 42°C) for varying periods of time (2 to 9 h). Infection severity (lesions per cm2 of leaf area) was calculated 7 to 10 days after inoculation. Immediately exposing inoculated plants to 30°C for as little as 2 h significantly (P ≤ 0.05) reduced infection severity compared with exposure at a constant 18°C. However, exposure of inoculated plants to optimal conditions for 24 or 48 h prior to exposure to supraconducive conditions reduced this effect for plants exposed to 30, 33, or 36°C. Exposure to 39 or 42°C for 2 or more hours resulted in infection frequencies not significantly different from that of the uninoculated control regardless of prior exposure to favorable conditions. Exposure to simulated field temperatures programmed into growth chambers indicated that inoculation at 1700 or 2100 h resulted in significantly more disease than did inoculation at 0900 or 1300 h. Plants exposed to supraconducive or simulated field temperatures for 7 days prior to inoculation developed significantly lower disease severity than did plants maintained at 18°C for 7 days. The magnitude, length, and time of exposure to supraconducive temperatures in relation to time of inoculation plays an important role in the development of hop powdery mildew, and rules addressing these variables could be a useful addition to disease risk assessment models.
Morphologic, Molecular, and Pathogenic Characterization of Diaporthe phaseolorum Variability in the Core Soybean-Producing Area of Argentina
Authors: Pioli Rosanna N. , Morandi Eligio N. , Martínez María C. , Lucca Florencia , Tozzini Alejandro , Bisaro Vilma , Hopp H. Esteban
Published: May 2007

Isolates of the Diaporthe/Phomopsis (D/P) complex were collected in the main soybean producing area of Argentina during the 1996-97, 1997-98, and 1998-99 growing seasons. Twenty-three morphologic characters related to type of colonies, stroma, pycnidia and conidia, presence of perithecia, and asci length were studied by principal component analysis (PCA). Genomic DNA were analyzed by the random amplified polymorphic DNA (RAPD) technique. From both studies, 18 isolates were identified as D/P complex and grouped in four major taxa: (i) Diaporthe phaseolorum var. meridionalis, (ii) D. phaseolorum var. caulivora, (iii) D. phaseolorum var. sojae, and (iv) Phomopsis longicolla. In addition to distinguishing interspecific and intraspecific variability, molecular markers allowed the detection of differences among isolates within the same variety. Pathogenicity was assayed in the greenhouse, by the toothpick method, inoculating the D/P isolates to soybean genotypes carrying different resistance genes (Rdc1, Rdc2, Rdc3, and Rdc4) against soybean stem canker (SSC). Pathogenic analysis distinguished two main groups: (i) the SSC-producing isolates, including D. phaseolorum var. meridionalis and D. phaseolorum var. caulivora, and (ii) the non-SSC-producing isolates, including D. phaseolorum var. sojae and P. longicolla. Cultivar RA-702 (susceptible control) was compatible with both D. phaseolorum var. meridionalis and D. phaseolorum var. caulivora isolates; meanwhile, Tracy-M (Rdc1 and Rdc 2 genes) was incompatible with D. phaseolorum var. meridionalis but compatible with D. phaseolorum var. caulivora isolates. The fact that Rdc1 and Rdc2 together (as in Tracy-M) confer an almost immune reaction to all assayed isolates of D. phaseolorum var. meridionalis but were ineffective against the D. phaseolorum var. caulivora isolates evaluated suggests that the virulence or avirulence genes in D. phaseolorum var. meridionalis and D. phaseolorum var. caulivora are different. Moreover, physiological races of D. phaseolorum var. meridionalis were detected by using differential soybean genotypes carrying distinct single Rdc genes. As far as we know, this is the first report on the existence of physiological races of D. phaseolorum var. meridionalis in South America. Selective pressure due to deployment of resistant host cultivars may have changed the frequency of the virulence or avirulence genes within the population of D. phaseolorum var. meridionalis. On the whole, our results show that pathogenic variability of D. phaseolorum in the core soybean-producing area of Argentina is higher than previously recognized.
Molecular Marker Mapping of Leaf Rust Resistance Gene Lr46 and Its Association with Stripe Rust Resistance Gene Yr29 in Wheat
Authors: William M. , Singh R. P. , Huerta-Espino J. , Islas S. Ortiz , Hoisington D.
Published: May 2007

Leaf and stripe rusts, caused by Puccinia triticina and P. striiformis, respectively, are globally important fungal diseases of wheat that cause significant annual yield losses. A gene that confers slow rusting resistance to leaf rust, designated as Lr46, has recently been located on wheat chromosome 1B. The objectives of our study were to establish the precise genomic location of gene Lr46 using molecular approaches and to determine if there was an association of this locus with adult plant resistance to stripe rust. A population of 146 F5 and F6 lines produced from the cross of susceptible ‘Avocet S’ with resistant ‘Pavon 76’ was developed and classified for leaf rust and stripe rust severity for three seasons. Using patterns of segregation for the two diseases, we estimated that at least two genes with additive effects conferred resistance to leaf rust and three to four genes conferred resistance to stripe rust. Bulked segregant analysis and linkage mapping using amplified fragment length polymorphisms with the ‘Avocet’ × ‘Pavon 76’ population, F3 progeny lines of a single chromosome recombinant line population from the cross ‘Lalbahadur’ × ‘Lalbahadur (Pavon 1B)’, and the International Triticeae Mapping Initiative population established the genomic location of Lr46 at the distal end of the long arm of wheat chromosome 1B. A gene that is closely linked to Lr46 and confers moderate levels of adult plant resistance to stripe rust is identified and designated as Yr29.
Effects of Date of Inoculation on the Within-Plant Movement ofXylella fastidiosaand Persistence of Pierce's Disease Within Field Grapevines
Authors: Feil Helene , Feil William S. , Purcell Alexander H.
Published: May 2007

The effects of date of inoculation on the development of Pierce's disease (PD) were evaluated in California grapevines during 1997 through 2000 at four locations. Some vines that had been inoculated either by using blue-green sharpshooters (Graphocephala atropunctata) as vectors or mechanically by needle puncture with the PD causal bacterium Xylella fastidiosa became infected during each month and at each location where infection was attempted. Vines inoculated on the earliest inoculation dates (April to May) developed more extensive and severe PD symptoms, and only 54% of these vines recovered from PD after the following winter, compared with vines that had been inoculated during June through August, of which 88% recovered from PD after the following winter. For the 1999 inoculations, the number of vines infected at a central California site (Parlier) was higher than the number of vines infected at a north coastal site (Hopland). For the best-fitting regression equation, percent recovery of vines infected with X. fastidiosa increased significantly with date of inoculation (r2= 0.737) at all sites excluding Hopland. The Hopland site had the highest percentage of vines that recovered from PD (100%). At most sites, only early infection (April and May) resulted in chronic disease unless the vines were inoculated at the bases instead of the distal tips of canes. Vines inoculated early in the growing season (April and May) have less chance to recover from Pierce's disease than vines inoculated later (July and August).
Cellular Location ofPrune dwarf virusin Almond Sections by In Situ Reverse Transcription-Polymerase Chain Reaction
Authors: Silva Cristina , Tereso Susana , Nolasco Gustavo , Oliveira M. Margarida
Published: May 2007

In situ reverse transcription-polymerase chain reaction (RT-PCR) was used in young leaves (from trees and in vitro shoots) and flower buds of almond (Prunus dulcis), a stone fruit, for cellular location of Prune dwarf virus (PDV, a member of the genus Ilarvirus). Sections obtained from samples fixed in formaldehyde and embedded in paraffin were refixed in formaldehyde to increase tissue preservation in the RT-PCR steps. The coat protein gene of PDV was used as the target to produce a cDNA copy that was amplified by PCR and visualized using a direct detection method with digoxigenin-labeled nucleotides. Protein digestion, PCR, and detection strategies were optimized for increased tissue preservation and signal intensity. PDV was found in infected samples within the vascular tissue of young leaves and flower buds as well as in the mesophyll in developing floral organs and in the generative and vegetative cells of pollen grains. PDV signals were observed in a ring surrounding the nucleus and spread in the cytoplasm. The results obtained are discussed in terms of the technique optimization and PDV distribution in tissues and transmission through pollen. The optimized protocol of in situ RT-PCR is a powerful technique to reveal low-abundant RNA species. Therefore, it is appropriate to study cell and subcellular distribution of RNA viruses in woody species.
Effects of Acibenzolar-S-Methyl and Ethirimol on the Composition of a Laboratory Population of Barley Powdery Mildew
Authors: Bousset L. , Pons-Kühnemann J.
Published: May 2007

To assemble a laboratory population of Blumeria graminis f. sp. hordei for a competition experiment, controlled crosses were performed among 30 parent isolates, which were characterized by their pathotype (i.e., the phenotype observed on a differential set containing lines including host resistance alleles) and their response to the fungicides ethirimol and triadimenol. Variability in the response to the chemical inducer of host-resistance acibenzolar-S-methyl (BTH: benzo[1,2,3]thiadiazole-7carbothioic acid-S-methyl ester) was introduced by using isolates collected in fields repeatedly treated with this chemical. Based on their pathotype and response to ethirimol, 137 isolates recovered from the crosses were chosen to assemble a laboratory population. This protocol produced variability in the laboratory population for traits chosen only in the parents (triadimenol) or both in the parents and the progenies (ethirimol). It was therefore postulated that the variability in the response to BTH, if present in the parents, was also present in the laboratory population. No association between these traits was observed. The effect of BTH on the evolution of the laboratory population was compared with the effect of the fungicide ethirimol. The laboratory population was exposed to selection pressures and its evolution was followed over 10 generations. Ethirimol treatments always induced a decrease in sensitivity, whereas no consistent trend was observed for sensitivity to triadimenol (not selected). This result indicates that the application of ethirimol induced a selection pressure. For BTH, (toxicological) sensitivity tests have not detected any consistent evolution, but pathotype diversity indicated that in cases when BTH was applied with ethirimol, BTH induced a further selection pressure in addition to that of ethirimol.
Control of Postharvest Decay of Apple Fruit with Candida saitoana and Induction of Defense Responses
Authors: El Ghaouth Ahmed , Wilson Charles L. , Wisniewski Michael
Published: May 2007

The ability of Candida saitoana to induce systemic resistance in apple fruit against Botrytis cinerea was investigated. To separate the antagonistic activity of C. saitoana from its ability to induce resistance, the antagonist and the pathogen were applied in spatially separated wounds. In fresh apples, C. saitoana applied 0 or 24 h before inoculation with B. cinerea showed no effect on lesion development caused by B. cinerea. When applied 48 to 72 h preinoculation with B. cinerea, however, C. saitoana reduced lesion diameter by more than 50 and 70%, respectively, compared with wounding. C. saitoana had no effect on lesion development on stored apples, regardless of the lag period between yeast treatment and inoculation with B. cinerea. In addition to inducing systemic resistance, C. saitoana increased chitinase and β-1,3-glucanase activities with a higher accumulation in fresh than in stored apples. In fresh apples, the onset of systemic resistance to B. cinerea coincided with the increase in chitinase and β-1,3-glucanase activity in systemically protected tissue. These studies show that C. saitoana is capable of inducing systemic resistance in apple fruit and indirectly suggest that antifungal hydrolases are involved in the observed systemic protection.
Induction of Chitinase, β-1,3-Glucanase, and Phenylalanine Ammonia Lyase in Peach Fruit by UV-C Treatment
Authors: El Ghaouth Ahmed , Wilson Charles L. , Callahan Ann M.
Published: May 2007

Treatment of peach fruit with UV-C light caused a rapid induction of chitinase, β-1,3-glucanase, and phenylalanine ammonia lyase (PAL) activities starting 6 h after treatment and reaching maximum levels at 96 h after treatment. By 96 h after UV-C treatment, chitinase, β-1,3-glucanase, and PAL activities in UV-C-treated fruit were over twofold above the levels observed for the control. In nontreated control fruit, no apparent increase in chitinase and β-1,3-glucanase activities was detected but a minor increase in PAL activity was seen. The transient increase in chitinase, β-1,3-glucanase, and PAL activities in UV-C-treated fruit was preceded by a gradual activation of the corresponding genes. UV-C-treated fruit showed an increase in accumulation of β-1,3-glucanase and chitinase mRNAs at 3 h after treatment, which peaked approximately 96 h posttreatment. A similar induction kinetic pattern was observed for PAL mRNA in response to UV-C treatment, except the induction started 6 h after UV-C treatment. These results show that the response of peach fruit to elicitor treatment is similar to that seen in other plant-elicitors interactions and suggests the involvement of peach biochemical defense responses in UV-C-mediated disease resistance.
The Identification of Two New Races ofPyrenophora tritici-repentisfrom the Host Center of Diversity Confirms a One-to-One Relationship in Tan Spot of Wheat
Authors: Lamari L. , Strelkov S. E. , Yahyaoui A. , Orabi J. , Smith R. B.
Published: May 2007

Pyrenophora tritici-repentis, causal agent of tan spot, induces necrosis and chlorosis in its wheat host. The tan spot system conforms to the toxin model and three host-specific toxins have been identified (Ptr ToxA, Ptr ToxB, and putative Ptr ToxC). Processing of a collection of isolates, obtained in the Fertile Crescent and Caucasus regions, yielded two new virulence patterns. Isolate Az35-5 combined the virulences of races 2 and 5 and was classified in the new race 7. Isolates TS93-71B and TS93-71F had a virulence pattern that combined those of races 2, 3, and 5 and were grouped in the new race 8. Southern analysis revealed that all three isolates possessed copies of the ToxA and ToxB genes, the first time the genes were found in a common background. The production of Ptr ToxA and Ptr ToxB by the isolates was confirmed by western blotting. Virulence patterns suggested that TS93-71B and TS93-71F may also produce Ptr ToxC, even though it was not present at detectable levels in culture filtrates. The identification of races 7 and 8 complete the theoretical maximum number of races that can be differentiated by three loci in the host (23= 8), assuming a one-to-one relationship. It appears that the wheat/P. tritici-repentis system is a mirror image of the classical gene-for-gene relationship.
Partial Resistance toMelampsora larici-populinaLeaf Rust in Hybrid Poplars: Genetic Variability in Inoculated Excised Leaf Disk Bioassay and Relationship with Complete Resistance
Authors: Dowkiw A. , Husson C. , Frey P. , Pinon J. , Bastien C.
Published: May 2007

Inoculated excised leaf disk technique allows decomposition of poplar partial resistance to Melampsora larici-populina leaf rust into key epidemiological components such as latent period (LP), uredinia number (UN), uredinia size (US), and spore production (SP) for a given M. larici-populina strain under controlled environmental conditions. Three hundred thirty-six genotypes from an interspecific Populus deltoides × P. trichocarpa F1progeny segregating for complete resistance to M. larici-populina strain 93ID6 were inoculated with M. larici-populina strain 93CV1. This strain was able to infect the whole family, except few probable recombinants. LP, final UN, and final US after one infectious cycle proved to be relevant complementary descriptors of partial resistance. Area under the disease progress curve and other parameters of uredinia appearance dynamics did not yield additional information. Indirect assessment of SP by US scoring was reliable and easy to access compared with direct spore counting. UN was the only trait for which a doubling of the inoculum pressure level had a significant effect, leading to greater differentiation between genotypes. Consistent with previous studies is the clear relationship between presence of complete resistance against M. larici-populina strain 93ID6 and higher partial resistance to M. larici-populina strain 93CV1 (32% longer LP, 76% smaller UN, and 34% smaller US). In the subpopulation compatible with 93ID6, bimodal distribution of genotypic means for US suggested implication of a major gene inherited from the P. trichocarpa parent. Residual variation was noted for the three epidemiological components, suggesting that additional genes might condition these quantitative traits.
Isolation and Characterization of Brenneria quercina, Causal Agent for Bark Canker and Drippy Nut of Quercus spp. in Spain
Authors: Biosca Elena G. , González Raquel , López-López María José , Soria Santiago , Montón Carmina , Pérez-Laorga Eduardo , López María M.
Published: May 2007

The drippy nut disease of oak was first described in California in 1967 and, since then, the causal agent has not been reported in any other area. This study describes for the first time in Europe the isolation of Brenneria (Erwinia) quercina from bark canker in addition to drippy bud and drippy nut in Quercus ilex and Q. pyrenaica. The bark canker and drippy bud symptoms were not previously described as caused by this bacterium. No fungal pathogens were associated with any of the symptoms. Physiological and biochemical characterization identified the pathogenic isolates from Spain as belonging to B. quercina, similar to the reference strain CFBP 1266. Fatty acid profiles of the Spanish isolates also were similar to the strain of B. quercina from California. Serological analysis by indirect immunofluorescence and enzyme-linked immunosorbent assay using polyclonal antisera against the reference strain of B. quercina and one Spanish oak isolate revealed some antigenic heterogeneity between isolates of different origins. Pathogenicity tests demonstrated that the Spanish isolates were able to reproduce internal symptoms of necrosis and acorn exudation in Q. ilex and Q. pyrenaica and suggest that B. quercina may be associated, among other causes, with the oak decline syndrome affecting Spanish oak forests.
Ontogenic Resistance to Powdery Mildew in Grape Berries
Authors: Gadoury David M. , Seem Robert C. , Ficke Andrea , Wilcox Wayne F.
Published: May 2007

Berries of Vitis vinifera are reported to be susceptible to infection by Uncinula necator until soluble solids levels (brix) reach 8%, and established colonies are reported to sporulate until brix reach 15%. However, our analysis of disease progress on fruit of selected V. vinifera cultivars indicated that severity became asymptotic several weeks earlier in fruit development. When mildew-free fruit clusters of V. vinifera ‘Chardonnay’, ‘Riesling’, ‘Gewürztraminer’, and ‘Pinot Noir’ were inoculated at stages ranging from prebloom to 6 weeks postbloom, only fruit inoculated within 2 weeks of bloom developed severe powdery mildew. Substantial ontogenic resistance to infection was expressed in fruit nearly 6 weeks before fruit brix reached 8% and over 2 months before they reached 15%. Rachises of ‘Chardonnay’ and ‘Riesling’ fruit clusters developed severe powdery mildew when inoculated at bloom, and disease increased steadily over the next 60 days. The rachis of fruit clusters inoculated 31 days after bloom developed only trace levels of powdery mildew. Berry weight of all four cultivars at harvest was reduced when fruit clusters were inoculated at bloom or 16 days postbloom, primarily by splitting, rotting, and dehydration of mildewed berries, but the weight of later-inoculated berries was not reduced. Inoculation of berries just as ontogenic resistance increased markedly, approximately 3 to 4 weeks postbloom, resulted in the development of inconspicuous, diffuse, non-sporulating mildew colonies on berries, sometimes associated with a network of necrotic epidermal cells. Rather than a protracted and relatively static period of berry susceptibility lasting 3 months, fruit of V. vinifera appear to acquire ontogenic resistance rapidly after fruit set. A refocusing of disease management on this critical period of high fruit susceptibility should greatly improve the efficacy of fungicides directed against powdery mildew.
Detecting Migrants in Populations of Rhizoctonia solani Anastomosis Group 3 from Potato in North Carolina Using Multilocus Genotype Probabilities
Authors: Ceresini Paulo C. , Shew H. David , Vilgalys Rytas J. , Gale Liane Rosewich , Cubeta Marc A.
Published: May 2007

The relative contribution of migration of Rhizoctonia solani anastomosis group 3 (AG-3) on infested potato seed tubers originating from production areas in Canada, Maine, and Wisconsin (source population) to the genetic diversity and structure of populations of R. solani AG-3 in North Carolina (NC) soil (recipient population) was examined. The frequency of alleles detected by multilocus polymerase chain reaction-restriction fragment length polymorphisms, heterozygosity at individual loci, and gametic phase disequilibrium between all pairs of loci were determined for subpopulations of R. solani AG-3 from eight sources of potato seed tubers and from five soils in NC. Analysis of molecular variation revealed little variation between seed source and NC recipient soil populations or between subpopulations within each region. Analysis of population data with a Bayesian-based statistical method previously developed for detecting migration in human populations suggested that six multilocus genotypes from the NC soil population had a statistically significant probability of being migrants from the northern source population. The one-way (unidirectional) migration of genotypes of R. solani AG-3 into NC on infested potato seed tubers from Canada, Maine, and Wisconsin provides a plausible explanation for the lack of genetic subdivision (differentiation) between populations of the pathogen in NC soils or between the northern source and the NC recipient soil populations.
Spatial Aspects of Light Leaf Spot (Pyrenopeziza brassicae) Epidemic Development on Winter Oilseed Rape (Brassica napus) in the United Kingdom
Authors: Evans N. , Baierl A. , Brain P. , Welham S. J. , Fitt B. D. L.
Published: May 2007

In microplot experiments in 1998-99 and 1999-2000, the start of light leaf spot epidemics could be predicted from weather data, using empirical equations for Pyrenopeziza brassicae apothecial (ascospore) development, ascospore infection criteria, and the latent period of P. brassicae. The dates when P. brassicae sporulation was first observed fitted predictions and initial spread of light leaf spot from an inoculum source was mostly in the prevailing wind direction, with differences between the two growing seasons attributable to differences in wind patterns. Subsequent secondary spread of disease could be predicted using temperature and rainfall data, and observations fitted predicted dates. In both 1998-99 and 1999-2000, initial spatial patterns of observed disease in January were random, because data were not significantly different from a binomial distribution (P = 0.18). Analysis of spatial data from samples in February and March indicated aggregation, because data fit was significantly different from a binomial distribution (P ≤ 0.026). These data were described by a beta-binomial distribution, suggesting that the spatial distribution of light leaf spot becomes aggregated as secondary spread occurs. The importance of wind-dispersed ascospores in initiating epidemics and rain-splashed conidia in secondary localized spread in relation to strategies for sampling winter oilseed rape crops in the United Kingdom to assess light leaf spot is discussed.
Two Newly Described Begomoviruses of Macroptilium lathyroides and Common Bean
Authors: Idris A. M. , Hiebert E. , Bird J. , Brown J. K.
Published: May 2007

Macroptilium lathyroides, a perennial weed in the Caribbean region and Central America, is a host of Macroptilium yellow mosaic Florida virus (MaYMFV) and Macroptilium mosaic Puerto Rico virus (MaMPRV). The genomes of MaYMFV and MaMPRV were cloned from M. lathyroides and/or field-infected bean and the DNA sequences were determined. Cloned A and B components for both viruses were infectious when inoculated to M. lathyroides and common bean. Comparison of the DNA sequences for cloned A and B components with well-studied begomovirus indicated that MaMPRV (bean and M. lathyroides) and MaYMFV (M. lathyroides) are unique, previously undescribed begomo-viruses from the Western Hemisphere. Phylogenetic analysis of viral A components indicated that the closest relative of MaYMFV are members of the Bean golden yellow mosaic virus (BGYMV) group, at 76 to 78% nucleotide identity, whereas the closest relative for the A component of MaMPRV was Rhynchosia golden mosaic virus at 78% nucleotide identity. In contrast, BGYMV is the closest relative for the B component of both MaYMFV and MaMPRV, with which they share ≈68.0 and ≈72% identity, respectively. The incongruent taxonomic placement for the bipartite components for MaMPRV indicates that they did not evolve entirely along a common path. MaYMFV and MaMPRV caused distinctive symptoms in bean and M. lathyroides and were transmissible by the whitefly vector and by grafting; however, only MaYMFV was mechanically transmissible. The experimental host range for the two viruses was similar and included species within the families Fabaceae and Malvaceae, but only MaYMFV infected Malva parviflora and soybean. These results collectively indicate that MaMPRV and MaYMFV are new, previously undescribed species of the BGYMV group, a clade previously known to contain only strains and isolates of BGYMV from the Caribbean region that infect Phaseolus spp. Both MaYMFV and MaMPRV may pose an economic threat to bean production in the region.
Performance and Mapping of Leaf Rust Resistance Transferred to Wheat from Triticum timopheevii subsp. armeniacum
Authors: Brown-Guedira G. L. , Singh S. , Fritz A. K.
Published: May 2007

Host plant resistance is an economical and environmentally sound method of control of leaf rust caused by the fungus Puccinia triticina, which is one of the most serious diseases of wheat (Triticum aestivum) worldwide. Wild relatives of wheat, including the tetraploid T. timopheevii subsp. armeniacum, represent an important source of genes for resistance to leaf rust. The objectives of this study were to (i) evaluate the performance of leaf rust resistance genes previously transferred to wheat from three accessions of T. timopheevii subsp. armeniacum, (ii) determine inheritance and allelic relationship of the new leaf rust resistance genes, and (iii) determine the genetic map location of one of the T. timopheevii subsp. armeniacum-derived genes using microsatellite markers. The leaf rust resistance gene transferred to hexaploid wheat from accession TA 28 of T. timopheevii subsp. armeniacum exhibited slightly different infection types (ITs) to diverse races of leaf rust in inoculated tests of seedlings compared with the gene transferred from TA 870 and TA 874. High ITs were exhibited when seedlings of all the germ plasm lines were inoculated with P. triticina races MBRL and PNMQ. However, low ITs were observed on adult plants of all lines having the T. timopheevii subsp. armeniacum-derived genes for resistance in the field at locations in Kansas and Texas. Analysis of crosses between resistant germ plasm lines showed that accessions TA 870 and TA 874 donated the same gene for resistance to leaf rust and TA 28 donated an independent resistance gene. The gene donated to germ plasm line KS96WGRC36 from TA 870 of T. timopheevii subsp. armeniacum was linked to microsatellite markers Xgwm382 (6.7 cM) and Xgdm87 (9.4 cM) on wheat chromosome arm 2B long. This new leaf rust resistance gene is designated Lr50. It is the first named gene for leaf rust resistance transferred from wild timopheevi wheat and is the only Lr gene located on the long arm of wheat homoeologous group 2 chromosomes.
Predicting Swiss Needle Cast Disease Distribution and Severity in Young Douglas-Fir Plantations in Coastal Oregon
Authors: Rosso Pablo H. , Hansen Everett M.
Published: May 2007

Swiss needle cast (SNC), caused by the fungus Phaeocryptopus gaeumannii, is producing extensive defoliation and growth reduction in Douglas-fir forest plantations along the Pacific Northwest coast. An SNC disease prediction model for the coastal area of Oregon was built by establishing the relationship between the distribution of disease and the environment. A ground-based disease survey (220 plots) was used to study this relationship. Two types of regression approaches, multiple linear regression and regression tree, were used to study the relationship between disease severity and climate, topography, soil, and forest stand characteristics. Fog occurrence, precipitation, temperature, elevation, and slope aspect were the variables that contributed to explain most of the variability in disease severity, as indicated by both the multiple regression (r 2 = 0.57) and regression tree (RMD = 0.27) analyses. The resulting regression model was used to construct a disease prediction map. Findings agree with and formalize our previous understanding of the ecology of SNC: warmer and wetter conditions, provided that summer temperatures are relatively low, appear to increase disease severity. Both regression approaches have characteristics that can be useful in helping to improve our understanding of the ecology of SNC. The prediction model is able to produce a continuous prediction surface, suitable for hypothesis testing and assisting in disease management and research.