bluuebunny/crossref_metadata_2025 huggingface dataset:
130 Effect of an appeasing substance application on growth, stress, handling quality and reproduction of Bos indicus beef heifers synchronized to fixed-time AI
Authors: de Lima Eduardo Assis , Vedovatto Marcelo , Farias Fabio , Ranches Juliana , Ferreira Matheus , Cappellozza Bruno I , Souza Osvaldo , Franco Gumercindo L Loriano
Published: March 2024

This experiment evaluated the effects of an analogue of bovine appeasing substance (BAS) on growth, stress, handling quality, and reproduction of Nellore heifers. Twenty-nine heifers [body condition score (BCS) = 4.84 ± 0.13; body weight (BW) = 371 ± 0.77 kg; 23 ± 2 months of age)] were assigned to 1 of 2 treatments: 1) Saline solution (0.9 NaCl; n = 14) or BAS (Secure Cattle, IRSEA Group, Quartier Salignan, France; n = 15). Both solutions were applied topically in the nuchal skin area (5 mL/heifers) at the beginning (d -9) of the fixed-time artificial insemination protocol (FTAI). Heifers were allocated in two different pastures according to the treatment (one pasture per treatment) for 15 d (time of action of BAS) and then combined in a single group (both treatments in the same pasture). Heifers were inseminated on d 0, and BW and BCS were collected on d -9 and 40. The temperament in the squeeze chute (entry and exit scores; scale 1 – 3; chute score; scale 1 – 5; greater values mean more reactive heifers) and blood samples were collected on d -9, 0, 7, 14 and 30. The percentual of aggression, accident, and dirtiness in the perineal region were evaluated on d 0 along with time to inseminate, estrus expression scores (scale 1 – 3; 1 = no expression, 2 = low expression, 3 = greater expression), and dominant follicle size. The corpus luteum size was measured on d 7 and 14, and the pregnancy and embryo size on d 40. The BAS vs. Saline-treated heifers tended to have greater BW change (23.6 vs. 20.8 ± 1.03 kg; P = 0.09) and had greater BCS change (0.05 vs. -0.21 ± 0.05; P < 0.01). The BAS vs. Saline-treated heifers tended to have lesser entry scores (1.42 vs. 1.67 ± 0.09; P = 0.09) and percentual of dirtiness in the perineal region (48.3 vs. 71.1 ± 8.67 %; P = 0.06), and no effects of treatment were detected (P ≥ 0.39) for chute score, exit score, aggression, accident and time to inseminate. The BAS vs. Saline-treated heifers had greater estrus scores (2.00 vs. 1.27 ± 0.21; P = 0.03), and no effects were detected (P ≥ 0.11) for ovarian variables, pregnancy rate, and conceptus size. Furthermore, no treatment effects were detected (P ≥ 0.25) for serum concentration of cortisol and plasma concentration of haptoglobin, ceruloplasmin, and progesterone. Therefore, BAS application at the beginning of the FTAI protocol could decrease the temperament and dirtiness in the perineal region and increase the growth and estrus expression of beef heifers.
134 A 12-year summary of effects of body weight at breeding and synchronization protocols on reproductive success of Bos indicus-influenced beef heifers grazing warm-season grasses
Authors: Brauner Cassio , Izquierdo Vinicius S , Vendramini João M B , Moriel Philipe
Published: March 2024

A retrospective analysis of 5 studies (2011 to 2022) evaluated the effects of body weight and synchronization protocols before the start of breeding season on reproduction of Bos indicus-influenced beef heifers. Data were collected from 594 Brangus crossbred heifers weaned on average at 280 ± 26 d of age, allocated to bahiagrass pastures (4 to 5 heifers and 0.8 to 1.0 ha/pasture), and supplemented with soybean hulls-based concentrate (0.5 to 1.8% of body weight, (BW); dry matter basis] from 2 weeks post-weaning until the end of the breeding season (189 ± 24 days of supplementation). Heifers were initially sorted into those that were supplement (S) and were not supplemented (NS) assigned to an estrous synchronization protocol before the start of the breeding season. Then, within each synchronization group, heifers were sorted into those that were below (BE) or above (AB) the average BW of all heifers (300 kg) at the start of the breeding season (n = 130, 126, 146, and 192 for BE+NS, BE+S, AB+NS, and AB+S heifers, respectively). Data were analyzed using GLIMMIX procedure of SAS using synchronization, BW at breeding, and resulting interaction as fixed effects, and heifer (synchronization × BW), study, and pasture(study) as random effects. Effects of synchronization × BW at breeding and synchronization were not detected for heifer BW and overall average daily gain (ADG). However, AB heifers were always (P < 0.0001) heavier from post-weaning until the end of the breeding season and had (P < 0.0001) greater overall ADG than BE heifers. Effects of synchronization × BW at breeding tended (P = 0.07) to detected for puberty attainment at the start of the breeding season, which was least (P < 0.01) for BE+NS, did not differ between BE+S vs. AB+NS (P = 0.37), and was greatest for AB+S heifers (31, 66, 60, and 81 ± 7.4%, respectively). However, final pregnancy and calving percentages differed (P < 0.01) only for BE vs. AB heifers (68 vs. 81 ± 4.4% and 63 vs. 75 ± 5.2%, respectively). Effects of synchronization × BW at breeding tended (P = 0.10) to detected for percent of heifers calving within the first 30 days of the calving season, which was least (P < 0.03) for BE+NS and did not differ (P = 0.20) among BE+S, AB+NS, and AB+S heifers (48, 69, 61, and 64 ± 5.9%, respectively). Hence, in Bos indicus-influenced beef heifers, BW above 300 kg at the start of the breeding season led to improved overall reproductive performance compared to BW < 300 kg, whereas estrous synchronization protocols had positive effects to puberty attainment (regardless of heifer BW) and improved early calving distribution only when heifers were below 300 kg at the start of the breeding season.
145 The effect of a plant secondary metabolite blend on energy metabolism and nutrient balance of beef cattle consuming low-quality warm season grass hay
Authors: Petzel Emily A , Bailey Eric , Brake Derek W
Published: March 2024

Plant secondary metabolites (PSM) such as condensed tannins, hydrolysable tannins, saponins and essential oils purportedly impact rumen fermentation at low inclusion rates in beef cattle diets. Twelve steers (347 ± 23 kg BW) of British and continental influence were allocated to 1 of 4 replicated 3 x 3 Latin squares. Latin squares each had 14 d periods (10 d adaptation and 4 d for sample collection). All cattle were fed ground warm-season hay (89.5% DM, 92.8% OM, 65.9% NDF, 43.6% ADF, 6.70% CP) at 1.5% of BW (DM-basis) and supplemented with soybean meal at 0.18% of BW (DM-basis) once daily. Treatments consisted of a blend of tannins, saponins and essential oils provided at 0% (Control), 0.1% (Low) and 0.3% (High) of hay offering. Treatments were mixed with daily soybean meal allotment and provided before feeding of hay. Urine and feces were completely collected from d 11 through 14 at 0730 h and daily amounts of urine and feces produced were measured gravimetrically. Measures of gaseous exchange were determined via indirect calorimetry on d 13 and 14. Open-circuit respiration calorimeters (91.4 × 91.4 × 191.2 cm) were used to collect respired gas and ruminal methane production. Total oxygen consumption and production of carbon dioxide and methane were calculated from the difference in concentration of oxygen, carbon dioxide, and methane from air exhausted from each calorimeter and concentration of oxygen, carbon dioxide, and methane in ambient air and multiplied by amounts of air flowing from each calorimeter standardized for temperature, pressure, and humidity. Data were analyzed for a Latin square using the MIXED procedure of SAS with fixed effect of treatment, period and square and random effect of steer. Linear and quadratic contrast coefficients were assigned using PROC IML for uneven spacing of treatments. Significance was declared when P ≤ 0.05. Per experimental design, forage N and OM intake did not differ (P ≥ 0.77). Apparent total tract digestion of OM, NDF and ADF did not differ (P ≥ 0.66) among treatments. Fecal nitrogen excretion, and the percentage of N excreted in feces increased linearly (P = 0.01). N balance tended (P = 0.08) to decrease linearly with increasing PSM supplemented. Methane (L/kg DMI) was not affected (P = 0.28) by treatments. Methane, GE, DE, and ME (mcal/kg DMI) was unaffected (P = 0.19) by treatment. Under the conditions of this experiment, a blend of PSM had little effect on rumen fermentation or energy metabolism in beef steers.
1 Use of the GreenFeed bait system to assist in measuring fecal output and digesta kinetics
Authors: Gunter Stacey , Friend Emalee J , Beck Matthew R , Moffet Corey A
Published: March 2024

With increased use of automated feeders, like the bait dispenser on an automated head chamber system (AHCS; GreenFeed; C-Lock Inc., Rapid City, SD), more scientists are investigating ways to use this equipment. Scientist with the Agricultural Research Service initially conducted an experiment to determine if dosing titanium dioxide (TiO2) through an AHCS is an alternative to the traditional hand-fed dosing method for estimating fecal output (FO). The AHCS used had a 2-hopper bait dispensing system, where one hopper contained alfalfa pellets marked with 1% TiO2 and the other contained alfalfa pellets. During the morning (0800), hand-fed heifers received 32 g of TiO2-marked pellets, whereas AHCS-dosed heifers also received 32 g of marked pellets during their first visit each day. A two one-sided t-test indicated the FO estimates were similar (P = 0.04), but the AHCS dosed heifers had greater (P < 0.01) variability; this difference in FO variability is probably due to the increased variability in dosing time (0615 ± 6.2 h). This research has highlighted the potential for dosing cattle with a marker through the AHCS, but conventional fecal marker methods assume steady-state concentration. Our research has shown that errors associated with external marker methods are not highly associated with analytical techniques but are most influenced by dose size and sampling inaccuracy. Hence, ad libitum use of an AHCS results in non-steady-state fecal concentrations. To determine whether reliable FO estimates could be obtained under conditions of irregular but known dose times, we designed 2 experiments where the steady-state assumptions were relaxed, and fit known time measured fecal concentrations to multi-dose digesta kinetics models to estimate FO. In these experiments we used individually penned, rumen fistulated Dexter steers and limit-fed a diet of hay and protein supplement. First, after a 7-d dietary acclimation, steers were given a dose of TiO2 through the rumen fistula and again on d 14, and over 120 h after each dose, 14 spaced fecal samples were collected. In Exp. 2, steers received the first of 6 daily doses, then on d 7 no dose, and on days 8 to 12 daily dosing resumed. Beginning on d 7, when dosing was skipped, fecal sampling began and over a 120-h period 14 fecal samples were collected. For Exp. 1, marker concentration data were fit to a G2 digesta kinetics model and for Exp. 2, concentration data were fit to a multi-dose G2 digesta kinetics model assuming identical digesta kinetics for each dose and the concentration over time as the sum of each pulse. Measured FO in Exp. 2 was 11% greater than the estimates obtained from fitting measured concentrations to multi-dose digesta kinetics models.
3 Measuring feed intake in cows
Authors: Lalman David L , Briggs Emma A , Talley Samuel R , Edens Jay , Beck Paul A , Foote Andrew P , Reuter Ryan R
Published: March 2024

In recent years, substantial progress has been made in understanding the sources of biological variation and genetic components of feed efficiency in growing animals consuming energy-dense mixed diets during the post-weaning phase. Much less is known about within-animal variation of feed efficiency for beef cows consuming moderate to low-quality forage diets common to most cow/calf production systems. Considerable evidence indicates the existence of a genetic by environment interaction for feed efficiency. Phenotype for feed intake and feed efficiency are most practically and cost effectively determined during the post-weaning growing stage. However, due to the additional nutrient sinks associated with gestation and lactation, and the cost, labor and technology required to measure economically relevant traits in mature cows, little is known about forage utilization efficiency in beef cows. The beef cow/calf segment of the industry represents, by far, the greatest opportunity to reduce beef production input costs and reduce the industry’s carbon footprint. We reason that selection tools for feed intake and feed efficiency developed over the last 20 years are effective for the post-weaning growing and finishing phases, although only marginally effective for beef cows consuming unprocessed, moderate to low-quality forage. In this session, we will discuss challenges, opportunities, and experiences associated with measuring forage intake and recovered energy in beef cows.
51 A preliminary study of the effect of dietary cottonseed on the follicular reserve of does artificially infected with Haemonchus contortus.
Authors: Marchant Nicolas , Dlamini Notsile H , Kameni Serge L , Feugang Jean M , Rios Leyla
Published: March 2024

Numerous studies have reported the negative effect of cottonseed gossypol on the ovarian reserve of the follicles, impairing female fertility. Injuries resulting in the depletion of primordial follicles can lead to permanent infertility. At birth, female mammals possess a fixed number of ovarian primordial follicles, which develop into primary, secondary, and antral follicles in a continuous and irreversible process. In this study, we evaluated the potential effects of dietary cottonseed gossypol in combination with parasitic infection on ovarian follicular reserve in meat goats. A total of 40 Boer x Spanish cross does were randomly subjected to cottonseed (CS) and parasite (P: Haemonchus contortus) in a 2x2 factorial arrangement of does (n = 8) per treatment groups (CS-/P-; CS+/P-; CS-/P+, and CS+/P+). Does were artificially infected with Haemonchus contortus for 2 d, and after 25 d, they began shedding parasite eggs. Thereafter, does were fed a hay diet supplemented with cottonseed (0.5% BW; CS+) or concentrate (CS-), to meet the nutritional requirements. Ten weeks later, animals were slaughtered, and ovaries of each treatment group (n = 4) were fixed with formalin and subjected to a standard procedure of histology staining (Periodic acid–Schiff and Hematoxylin counterstaining). Cuts of one left and one right ovary of two does were placed on microscope slides, and 48 slides were subjected to a microscope visualization (EVOS FL Auto; 20x magnification). Primordial follicles were classified as healthy (stained nucleus), unhealthy (pycnotic), and undetermined. Data were analyzed with ANOVA 1 and expressed as mean ± sem. P < 0.05 indicates a significant difference. A total of 20,562 primordial follicles corresponding to 10,410 (50.6%) healthy; 3,729 (18.1%) unhealthy; and 6,909 (33.6%) undetermined were examined; of which 26%, 20%, 31%, and 23% of total primordial follicles belonged to the CS-/P-, CS-/P+, CS+/P-, and CS+/P+ treatment groups, respectively. A significantly (P < 0.05) greater number of follicles were counted on left vs. right ovary sections (11,584 vs. 8,978) corresponding to 56.3% vs. 43.7% of total follicle counts. Averages of 121 ± 6 vs. 101±6 follicles were calculated per left and right ovary sections. Diets containing cottonseed (CS+/P-) increased the average number of follicles per ovary section, while parasite infections significantly (P < 0.05; CS-/P+ and CS+/P+) decreased these numbers. Regardless of the treatment group, the proportions of healthy follicles remained comparable between treatment groups. We concluded that dietary cottonseed and parasitic infections inversely affect ovarian follicle reserve, while the proportions of healthy follicles were unaffected across treatment groups. Nevertheless, higher microscopic magnification is needed to better characterize the large proportion of undetermined follicles.
55 Evaluation of feed efficiency and feeding behavior in Katahdin lambs housed in a Vytelle Sense system
Authors: Valliere Nicole K , Wright Lee L , Weaver Andrew R , Bowdridge Scott A , Greiner Scott P
Published: March 2024

Genetic selection focused on feed efficiency may prove to be valuable in reducing feed consumption costs and animal maintenance requirements without compromising growth. The Vytelle Sense system allows measurement of individual lamb DMI and varying feeding behaviors to identify feed efficient lambs. The aim of this study was to evaluate the impact of sire selection based on fecal egg count estimated breeding value (FEC EBV) on residual feed intake (RFI), gain:feed (G:F), and daily DMI. Katahdin ewes at the Virginia Tech Southwest Virginia Agricultural and Research Center (SWAREC) were mated to Katahdin rams (LowFEC: n = 4; HighFEC: n = 4) to divergently select for FEC EBV in their offspring (LowFEC: n = 36; HighFEC: n = 32). Post-weaning, lambs were fed a complete pellet (14% CP, 76% TDN) ad libitum in the Vytelle Sense system for 58 days. RFI was calculated as the difference between actual and expected DMI. DMI was predicted based on ADG and metabolic body size. Feeding duration per meal and DMI per meal were analyzed to determine feeding behavior. Statistical analyses were performed using PROC Mixed SAS (SAS Institute, Cary, NC). Sire FEC EBV type tended to have an effect on RFI (P = 0.06). Individual sire had a significant effect on RFI, G:F, and daily DMI (P < 0.05). Sex did not impact RFI (P > 0.10). Ram lambs had greater G:F values compared with ewes (0.32 vs. 0.26 kg; P < 0.05). Rams had greater daily DMI compared with ewes (2.37 vs. 1.89 kg/d; P < 0.05). Significance was detected between sires for meal duration (P < 0.05). Ewe lambs exhibited greater meal duration compared with rams (237.3 vs. 203.4 s/meal; P < 0.05). However, ewes had reduced DMI per meal compared with rams (0.29 vs. 0.34 kg/meal; P < 0.05). Individual sire did not have an effect on meal DMI (P > 0.10). To evaluate sire impact on RFI across multiple locations, LowFEC Katahdin rams (n = 2), mentioned previously, were bred to Katahdin ewes at the NC State University Upper Piedmont Research Station (UPRS) and the SWAREC. Genetic connectedness between locations allowed for comparisons of progeny performance. Post-weaning, UPRS lambs were fed a complete pellet (16% CP, 75% TDN) ad libitum in the Vytelle sense system for 45 d. Location did not impact RFI prediction for either sire (P > 0.10). Variation between sires indicates potential sire impact on progeny feed efficiency and feeding behavior. Further studies are needed to evaluate sire RFI trends across multiple locations.
58 United States Department of Agriculture National Animal Health Monitoring System Goat 2019 study: Distribution of gastrointestinal nematodes
Authors: Miller James E , Avery Ryan , Burke Joan M
Published: March 2024

One objective of the United States Department of Agriculture National Animal Health Monitoring System Goat 2019 study was to describe practices producers use to control gastrointestinal nematodes (GIN) and reduce anthelmintic resistance through the examination of anthelmintic treatment efficacy via fecal egg count reduction tests and fecal cultures. The fecal cultures were used to determine what GIN were present across the areas of the US included in the study (September 2019-April 2020). Bulk cultures were processed from 318 operations in 24 states and results were consolidated into 4 regions: Northwest (3 states, 34 operations), Northeast (9 states, 89 operations), Southeast (9 states, 132 operations) and Southwest (3 states, 63 operations). GIN identification included Haemonchus, Trichostrongylus, Teladorsagia, Oesophagostomumand Nematodirus. In addition to GIN, lungworm presence was also noted. Haemonchus were found on 18.6% of the operations (Northwest, 27.0%; Northeast, 13.1%; Southeast, 15.9% and Southwest, 29.2%). Trichostrongylus were found on 97.2% of the operations (Northwest, 100%; Northeast, 98%; Southeast, 97.0% and Southwest, 95.7%). Teladorsagia were found on 80.3% of the operations (Northwest, 97.1%; Northeast, 71.6%; Southeast, 88.6% and Southwest (75.7%). Oesophagostomum were found on 38.2% of the operations (Northwest, 73.1%; Northeast, 39.6%, Southeast, 46.4% and Southwest, 15.5%). Nematodiruswere found on 7% of the operations (Northwest, 7%; Northeast, 5.2%, Southeast, 20.8% and Southwest, 0%). Lungworms were found on 35.4% of the operations (Northwest, 69.1%; Northeast, 52.2%, Southeast, 33.4% and Southwest, 8.3%). Due to sampling logistics, fecal collection was conducted during autumn through early spring which may have influenced number of more pathogenic GIN. This study provided valuable insight into regional prevalence of GIN in goats. In depth analyses continues and will be forthcoming.
116 In-situ degradability of hemp (Cannabis sativa L.) plant components in cattle
Authors: Lopez Alyssa , Fukuda Emma , Fruge Greyson , Drewery Merritt L
Published: March 2024

The 2014 and 2018 Farm Bills defined hemp (Cannabis sativa L.) as an agricultural commodity and removed it from the controlled substances list, developing a pathway for commercialization and increasing interest in cultivating hemp in the United States. Demand for therapeutic, cannabinoid-based hemp products is increasing, and, as not all of the plant components are utilized for these products, there will likely be significant quantities of hemp by-products created. As these by-products are cellulosic, they may be marketed as livestock feed, especially for ruminant animals. There have been limited studies into hemp as cattle feed. Accordingly, the objective of this study was to determine the in-situ degradability of different hemp components in beef cattle. We conducted an in-situ trial with three ruminally cannulated steers (IACUC #8497) and 16 unique hemp samples: leaves, flower, stalk, or whole plant cultivated with four different seed inoculants. Samples were incubated in the rumen for 0, 4, 6, 12, 24, 48, and 72 h and replicated across each steer. After samples were removed, they were rinsed and analyzed for partial dry matter (DM), DM, organic matter (OM), and crude protein (CP). Solubility fractions [immediately soluble (IS), potentially soluble (PS), and not soluble (NS)], rate of degradation (kd), and rumen degradability was determined for OM and CP. Rate of passage (kp) was set at 4.7%. As there were not differences across seed inoculant method, data were combined across plant components. For OM, the NS fraction was greatest for hemp stalks (12%) and least for leaves (7%). The PS fraction ranged 72-75% across plant components with the least value for stalks and greatest for leaves. Of the PS fraction, ruminal OM degradability was least for stalks (51%) and greatest for leaves (72%). For CP, the NS fraction of hemp stalks (16%) was greater than other fractions, which ranged from 6-8%. The PS fraction was approximately 76% for both whole plant and leaves, a vast majority of which (71-73%) was degradable, indicating these plant components provide a good source of rumen degradable protein. The IS fraction was greatest (20%) for hemp flower. Although hemp flower may be easily digested by ruminants, it does not have practical value because this plant component competes in the human market as the flower contains a high percentage of cannabinoids which have therapeutic properties. Ultimately, our data indicate that hemp leaves have nutritional and practical value as feed for beef cattle and that hemp stalks would likely not be well-utilized as a forage source. Before hemp can be integrated into the beef cattle industry as feed, additional research is required to determine the effects of feeding hemp on animal performance and evaluate uptake and retention of cannabinoids in body tissues.
112 In situ evaluation of multiple edible insects as feed for cattle
Authors: Dominguez Delila , Fukuda Emma , Rea Jay , Drewery Merritt L
Published: March 2024

Livestock production is growing and intensifying in response to a growing population and associated food demands. Commercially reared insects have been positioned as a potential protein source for livestock due to their nutritional value and decreased environmental footprint as compared with conventional protein feeds. The American Association of Feed Officials (AAFCO) has issued a definition for black soldier fly larvae (BSFL) as feed for certain livestock but has not yet authorized feeding BSFL to ruminants. Further, AAFCO has not provided a feed definition for other edible insects [e.g., mealworm larvae (MWL)], likely due to a lack of research evaluating the value of insects as feed. The objective of this study was to evaluate edible insect species as feed for cattle by determining in situ characteristics of multiple commercially reared species. This research was approved by Texas State University IACUC (#8693). Samples (n = 14) included five insect species [i.e., black soldier fly larvae (BSFL)], mealworm larvae (MWL), house cricket, grasshopper, and banded cricket] that were commercially reared on different feed inputs and with various processing parameters and BSFL frass, which is insect excreta. There were 6 samples of BSFL, two of MWL, and three of house crickets. Three ruminally cannulated steers were used and provided ad libitum hay and water. A 6-d trial period was performed including a 3-d adaptation and 3-d experimental incubation period. Samples incubated in the rumen at 7 timepoints in reverse order (0, 4, 6, 12, 14, 48, and 72 h). After incubation, residues were analyzed for partial dry matter (PDM), dry matter (DM), and organic matter (OM). Dry matter and OM were separated into immediately soluble (IS), potentially soluble (PS), and not soluble (NS) fractions. For DM, the average NS fraction was 6.2% with a range from 3.0 to 10.4%. The sample with the greatest NS fraction was grasshopper. Across samples, the average PS fraction was 74.5% with a range from 69.3 to 79.1%. The sample with the smallest PS fraction was BSFL frass whereas the sample with the greatest was BSFL. Multiple samples had a DM degradability >85%. However, MWL and BSFL had fluctuating DM degradability across samples, likely due to variability among processing parameters. For OM fractionation, the average NS fraction was 5.7% with a range of 2.8 to 10.4%. Grasshopper had the greatest NS fraction. The average PS fraction was 74.9%; BSFL had the greatest PS fraction while frass had the least. Many samples had an OM degradability >85% and frass had the greatest degradability (90.0%). There was great variability in OM degradability across house cricket samples, likely related to rearing diet. These findings indicate that BSFL and MWL have potential value as feed for cattle but there would be challenges associated with feeding crickets.
106 Advancing precision livestock management in the dairy industry: An early exploration of individual cow tracking using YOLOv5-Based computer vision
Authors: McGee Marcus , Clayton Cierra , Victory Abigail , Hardin Colby , Hudson Christopher
Published: March 2024

Precision livestock management in the dairy industry holds promise for addressing the ability of future livestock producers to accurately track multiple health factors related to animal welfare and milk production. While there are significant challenges with integrating sensors into the dairy, a key challenge lies in accurately tracking individual cows across multiple sensors, allowing data correlation with health and milk records. The emergence of artificial intelligence and other innovative technologies provides a unique opportunity for livestock producers. The objective of this study is to examine the ability of computer-based vision using YOLOv5 to automatically detect and identify individual animals housed in a group setting. The study was conducted at the Joe Bearden Dairy Research Center, where lactating cows (seven Holstein-Friesian, three Jersey) were housed within a single pen of a freestall with sand bedding. Animals were managed in accordance with the standard operating procedure of the dairy. Video was captured in 4k resolution via a four camera closed caption media recording system. Cameras were placed at an angle in each corner of the pen providing multiple perspectives of each animal throughout the study. Initial training video data for the algorithm were generated through manual annotation from a single viewpoint for proof of concept. The video capture was segmented into a total of 3,241 frames, with a total of 84 frames manually annotated using open-source software and utilized for training data spanning 75 epochs. Eight images were used for validation. Transfer learning was applied using pretrained weights for the YOLOv5s model. The trained model achieved high precision (0.97) and recall (0.96) during validation. Notably, the F1-Confidence curve showcases a good F1 score of 0.96 at a confidence interval of 0.69. In conclusion, this preliminary work sets the stage for effective sensing and individual cow tracking, with far-reaching implications for dairy farming precision and productivity. While the trained model exhibited strong performance within the confines of its training data, challenges arise when presented with previously unseen angles of the animals, leading to potential identification errors. Moreover, the presence of sand beds occasionally obstructs clear views of the animals, introducing additional uncertainties. To address these challenges and enhance the robustness of the model, future work should incorporate images captured from additional camera viewpoints, ensuring a more comprehensive and reliable identification system for precision animal management in the dairy industry.
110 Effects of sire selection on puberty and reproduction of offspring selected as replacement heifers
Authors: McDonald Terry H , Johnson Chris , Vining Timothy P , Major Mike , Lamberti Gabriela , Lopes Maria , Bonmann Nicole , Moraes Joao , Beck Paul A
Published: March 2024

Sire selection is important to maintain the desired genetic capability of any cattle herd; therefore, selection of economic production traits affect profitability by increasing pre- and post-weaning gain and carcass quality potential. Using heifers developed from sires selected for growth and milk traits may have long-term impact on sustainability of the cowherd by influencing mature cow size and milk production. Our objective was to determine the impacts of sires selected for high and moderate growth and high and low milk traits on growth and reproductive performance of replacement heifers. Therefore, we selected replacement heifers sired by bulls within the upper 5th and 50th percentiles of the Angus breed for yearling weight (YW) EPD as high growth (HG) moderate growth (MG), the upper 15th percentile of the Angus breed for milk EPD as high milk (HM), and the lower 15th percentile for low milk (LM) in a 2×2 factorial design resulting in 4 treatments: HG/HM, HG/LM, MG/HM, and MG/LM. Heifers (n = 46) from appropriate AI sires that were born and developed at Oklahoma State University – Range Cow Research Center – South Range Unit were selected as replacements. They were raised on a base diet of dry, dormant tall grass prairie and moderate quality grass hay following weaning and 2 kg/d of 16% crude protein concentrate supplement. Body weights and biometrics were recorded at weaning and approximately at 1-yr of age, and blood was collected at 11 and 0 d before synchronization for progesterone analysis to determine pubertal status pre-breeding. Estrus was synchronized using the 14-d CIDR-PG with timed AI method followed by a 45-d natural service breeding period. Pregnancy checks were conducted by serum collection 35-d following AI and via rectal palpation by an experienced veterinarian 112 d after removal of the bulls. Statistical analyses were performed using the mixed procedure of SAS (SAS 9.4, SAS INC., Carey, NC). Heifers from high growth sires were 28 kg heavier at weaning (P < 0.01) and 26 kg heavier as yearlings (P < 0.01) than those sired by moderate growth sires, while sire milk EPD affected neither (P ≥ 0.55). High growth and high milk sired heifers had greater hip heights, frame scores and thus greater (P ≤ 0.05) estimated mature body weight (EMBW). Despite this, sire selection had no impact on percentage of heifers pubertal before breeding, AI pregnancy, or the total pregnancy rates (P > 0.24) Based on these data, selection of sires for HG and HM leads to increased productivity of the offspring but gives rise to larger mature cows, which may pressure grazing resources in limited resource environments impacting the long-term sustainability of the cow-calf enterprise.
111 First Kiko Buck Performance Test in Mississippi
Authors: Marchant Nicolas , Mazeres Kelsey , DeGayner Jill , Shook Alex , Vann Rhonda C , Smith Trent , Lemus Rocky , Rios Leyla
Published: March 2024

Kiko is a meat breed of goats originating from New Zealand, they are recognized for their hardiness and parasite resistance. There is a lack of information on economically important traits for this breed in the US, particularly in the Southeast. The Kiko buck performance test allows producers to make educated breeding decisions through impartial data. These tests have occurred in the United States for years; however, this is the first buck test performed on commercial farm grazing conditions in Mississippi (MS). A goat that performs well in a test in another state may not perform well in high temperatures, humidity, ground moisture, and availability of parasites in MS. The objective of the test was to collect data on the performance of weaned Kiko bucks grazing under commercial farm conditions in south MS from July to October of 2023 (IACUC-23-138). Forty-five farmers from 14 different states (KY, OK, FL, NC, MS, AL, IN, IL, GA, TN, AR, VA, MO, and WV) consigned 88 Kiko bucks. Every 2 wk measurements were taken on the goats including body weight (BW), body condition score (BCS), FAMACHA, and fecal count of nematode eggs (FEC expressed as eggs per gram of feces – EPG), also at the start and end of the test loin eye area (LEA) was measured through ultrasound. Forage samples were collected for quality analysis, the average values starting the test were 13% CP and 47.4 TDN. Upon arrival, the bucks were dewormed using a combination of drugs, and after 2 wk of confinement went out with only grazing to start the 10 wk of test. During the test bucks were dewormed using the following parameters: >2,500 EPG and FAMACHA 4 or 5 or BCS < 1.5, any goat falling in these criteria was not considered for the final ranking. Bucks were separated into two groups: those born on or before February 8th, 2023 (group 1-G1, n = 44) and those born after (group 2-G2 n = 34). Ratios of the average daily gain (ADG), nematode FEC, and the ratio of LEA/BW were used in the final index. As all values are considered of equal economic importance, they all contributed the same to the final index. For G1 ADG, FEC, LEA/BW was 60 g/d (SD 20), 832.75 EPG (SD = 504.32), and 0.88 cm²/kg (SD = 0.20), respectively. For G2 ADG, FEC, and LEA/BW was 50 g/d (SD = 40), 907.86 EPG (SD = 492.61), and 0.81 cm²/kg (SD = 0.19), respectively. Bucks were ranked by highest index value in the group, for G1 the 1st place buck was from MS with ADG, FEC, LEA/BW of 90 g/d, 175 EPG, and 1.41 cm²/kg, respectively. For G2 the 1st place buck was from IN with ADG, FEC, and LEA/BW of 140 g/d, 116.67 EPG, and 1.00 cm²/kg, respectively.
114 The efficacy of a natural fungus (Duddingtonia flagrans) in reducing gastrointestinal nematode indicators in lambs
Authors: Queen Jessica , O'Brien Dahlia J , Wildeus Stephan A , Davis Javin , Robertson MacKenzie , Matthews Kwame
Published: March 2024

Sustainable and profitable small ruminant production in the US is affected by infections with gastrointestinal nematodes (GIN), especially the blood sucking GIN, Haemonchus contortus. The overuse and misuse of available drug classes has led to multi-drug resistant GIN that pose significant challenges to parasite control on many farms. The objective of this study was to evaluate the effectiveness of a natural fungus (Duddingtonia flagrans; Bioworma, International Animal Health) in reducing GIN larval counts and other GIN indicators in hair sheep wethers. Eighteen St. Croix (n = 9) and Barbados Blackbelly (n = 9) wethers (227 ± 1.4 days of age and 29.7 ± 0.6 kg BW) were dewormed (d 0) with a combination of levamisol (Prohibit; 8 mg/kg BW) moxidectin (Cydectin; 0.2 mg/kg BW) and albendazole (Valbazen; 7.5 mg/kg BW) prior to the start of feeding according to the manufacturer’s recommendations for feeding BioWorma. At this time, lambs were separated into two treatment groups (n = 9/group), split into 3 replications per treatment group and placed on six pasture paddocks (0.06 ha; n = 3 per paddock) after accounting for breed, initial fecal egg count (FEC) and BW. Lambs were then fed daily either a grain supplement ration (corn and soybean meal) with Livamol with Bioworma (LIV) or without (CON) at 2% of their BW for 98 d. LIV was added to the ration based on total lamb BW/paddock. To evaluate the effect of LIV treatment, BW and body condition scores (BCS) were recorded every 2 wk for 98 d. Blood and fecal samples were also collected for determination of packed cell volume (PCV) and FEC. Pooled treatment group feces (d 0 – 98) were collected and cultured to determine GIN genera. A subset of animals/treatment (n = 3) will be harvested to determine abomasal worm counts. Data were analyzed using repeated measures in a mixed model, and FEC were log transformed before analysis. Following deworming (d 0), FEC were reduced by 100% by d 14. There was a mixed population of GIN at the start of the study (averaging 54%, 42%, 1.2% and 1.8% for H. contortus, Tricostrongylus spp., Oesphagostomum spp. and Nematodirus spp., respectively). LIV with Bioworma supplementation had no impact on BW, BCS, PCV or FEC in this study averaging 34.2 ± 0.3 kg, 2.5 ± 0.04, 34.7 ± 0.5% and 150.9 eggs per gram, respectively. Under the conditions of this study, Bioworma® supplementation had no influence on GIN indicators measured up to 100 d of grazing. This research will be continued during subsequent grazing seasons to determine the effect of continued supplementation on lamb parasite load and performance as well as pasture infestation levels.
Round-up of IP decisions in Africa 2023
Authors: Okorie Chijioke , Koros Dorcas Chebet , Mgonja Jessie Victoria , Ho Tu Nam Nora , Chindah Rita Anwiri , Schneider Marius
Published: March 2024

This contribution offers an analysis of selected important decisions in the field of IP law issued in the period 1 January to 31 December 2023 by national courts in individual African countries (Kenya, Nigeria, South Africa Tanzania, Uganda and Zimbabwe). Specifically, the industries covered in the decisions analysed in this contribution include digital music and the creative industries, pharmaceuticals and paint manufacturing. The contribution also highlights legislative reforms and other developments in various IP law fields in Africa in 2023.
Stability and plasticity of regulatory T cells in health and disease
Authors: Contreras-Castillo Eugenio , García-Rasilla Verónica Yutsil , García-Patiño María Guadalupe , Licona-Limón Paula
Published: March 2024

The mechanisms that negatively regulate inflammation upon a pathogenic stimulus are crucial for the maintenance of tissue integrity and organ function. T regulatory cells are one of the main drivers in controlling inflammation. The ability of T regulatory cells to adapt to different inflammatory cues and suppress inflammation is one of the relevant features of T regulatory cells. During this process, T regulatory cells express different transcription factors associated with their counterparts, Th helper cells, including Tbx21, GATA-3, Bcl6, and Rorc. The acquisition of this transcription factor helps the T regulatory cells to suppress and migrate to the different inflamed tissues. Additionally, the T regulatory cells have different mechanisms that preserve stability while acquiring a particular T regulatory cell subtype. This review focuses on describing T regulatory cell subtypes and the mechanisms that maintain their identity in health and diseases.
1H-NMR-based metabolomics to dissect the traditional Chinese medicine promotes mesenchymal stem cell homing as intervention in liver fibrosis in mouse model of Wilson’s disease
Authors: Ma Ying , Bao Yuancheng , Wang Han , Jiang Huaizhou , Zhou Lei , Yang Bo , Huang Xiaofeng , Yang Wenming , Xie Daojun , Zhang Juan
Published: March 2024

Background

We administered Bushen Huoxue Huazhuo Formula (BSHXHZF) and transplanted bone marrow mesenchymal stem cells (BMSCs) into mice with Wilson’s disease (WD)-related liver fibrosis to evaluate the liver-protecting mechanism of this prescription.

Methods

Mice, randomly divided into different treatment groups, showed histopathological changes and degree of hepatocyte apoptosis. For hepatic hydroxyproline (Hyp) determination, transforming growth factor-β1 (TGF-β1) and bone morphogenetic protein-7 (BMP-7) mRNA and protein were measured. Chemical profiling of the extract of BSHXHZF using The liquid chromatography-mass spectrometry (LC-MS/MS) and revealing its antifibrosis mechanism using metabolomics.

Results

TCM+BMSC group livers exhibited few inflammatory cells. TUNEL revealed abundant brown apoptotic cells in model control groups, while the TCM+BMSC groups showed a significant increase in blue negative expression of liver cells. Hyp in toxic milk (TX) mice groups was significantly lower than that in model control groups (MG). Compared with MG, TGF-β1 expression was significantly lower than all other groups, while BMP-7 expression was significantly higher. Metabolic analysis identified 20 potential biomarkers and 10 key pathways, indicating that BSHXHZF+BMSC intervention has a significant regulatory effect on metabolic disorders of these small molecule substances.

Conclusion

BSHXHZF combined with BMSCs can inhibit liver fibrosis and hepatocyte apoptosis by improving related metabolic disorders, and achieving therapeutic effects in WD-related liver fibrosis.
Optimal transport-based machine learning to match specific patterns: application to the detection of molecular regulation patterns in omics data
Authors: Nguyen Thi Thanh Yen , Harchaoui Warith , Mégret Lucile , Mendoza Cloé , Bouaziz Olivier , Neri Christian , Chambaz Antoine
Published: March 2024

We present several algorithms designed to learn a pattern of correspondence between 2 data sets in situations where it is desirable to match elements that exhibit a relationship belonging to a known parametric model. In the motivating case study, the challenge is to better understand micro-RNA regulation in the striatum of Huntington’s disease model mice. The algorithms unfold in 2 stages. First, an optimal transport plan P and an optimal affine transformation are learned, using the Sinkhorn–Knopp algorithm and a mini-batch gradient descent. Second, P is exploited to derive either several co-clusters or several sets of matched elements. A simulation study illustrates how the algorithms work and perform. The real data application further illustrates their applicability and interest.
Hi-C techniques: from genome assemblies to transcription regulation
Authors: Šimková Hana , Câmara Amanda Souza , Mascher Martin
Published: March 2024

The invention of chromosome conformation capture (3C) techniques, in particular the key method Hi-C providing genome-wide information about chromatin contacts, revolutionized the way we study the three-dimensional organization of the nuclear genome and how it affects transcription, replication, and DNA repair. Because the frequency of chromatin contacts between pairs of genomic segments predictably relates to the distance in the linear genome, the information obtained by Hi-C has also proved useful for scaffolding genomic sequences. Here, we review recent improvements in experimental procedures of Hi-C and its various derivatives, such as Micro-C, HiChIP, and Capture Hi-C. We assess the advantages and limitations of the techniques, and present examples of their use in recent plant studies. We also report on progress in the development of computational tools used in assembling genome sequences.
Cryotherapy-Induced Iatrogenic Frostbite on Distal Digit: Case Report and Review of Management Strategies
Authors: Pendlebury Gehan , Brahe Catherine , Schmiedecke Rudy
Published: March 2024

Cryotherapy is a widely utilized topical treatment for various dermatological conditions. While generally safe and effective, it carries potential risks, such as frostbite injury. Frostbite, a vascular condition causing skin and tissue freezing, is usually associated with prolonged exposure to freezing environments. Certain populations, like military personnel navigating frigid terrains, face an increased risk of frostbite and other cold-weather injuries. In this case, we present an unusual instance of iatrogenic frostbite in a 23-year-old active duty United States Navy Sailor. The patient required a diverse range of treatment modalities, including pain management, sildenafil, nitroglycerine paste, and hyperbaric oxygen therapy. The implemented treatment regimen resulted in significant clinical improvements with minimal long-term structural damage. This case underscores the clinical value of establishing clear management guidelines for cryotherapy administration in cutaneous conditions. Such guidelines are essential to ensure optimal dosing, minimize adverse sequelae, and improve overall prognosis.
Extrapolating the projected potential of gravitational lens models: property-preserving degeneracies
Authors: Liesenborgs Jori , Perera Derek , Williams Liliya L R
Published: March 2024

While gravitational lens inversion holds great promise to reveal the structure of the light-deflecting mass distribution, both light and dark, the existence of various kinds of degeneracies implies that care must be taken when interpreting the resulting lens models. This article illustrates how thinking in terms of the projected potential helps to gain insight into these matters. Additionally it is shown explicitly how, when starting from a discretized version of the projected potential of one particular lens model, the technique of quadratic programming can be used to create a multitude of equivalent lens models that preserve all or a subset of lens properties. This method is applied to a number of scenarios, showing the lack of grasp on the mass outside the strong lensing region, revisiting mass redistribution in between images, and applying this to a recent model of the SDSS J1004+4112 cluster, as well as illustrating the generalized mass sheet degeneracy and source-position transformation. In the case of J1004, we show that this mass redistribution did not succeed at completely eliminating a dark mass clump recovered by grale near one of the quasar images.