bluuebunny/crossref_metadata_2025 huggingface dataset:
Shallow conduit dynamics fuel the unexpected paroxysms of Stromboli volcano during the summer 2019
Authors: Viccaro Marco , Cannata Andrea , Cannavò Flavio , De Rosa Rosanna , Giuffrida Marisa , Nicotra Eugenio , Petrelli Maurizio , Sacco Gaia
Published: January 2021

Open conduit basaltic volcanoes can be potentially hazardous as the eruptive activity may turn suddenly from a steady state to highly explosive. Unexpected changes in explosion intensity are recurrent at Stromboli volcano, where major explosions and large-scale paroxysms sometimes break off the ordinary, Strombolian activity with little or no warning. Two powerful paroxysmal eruptions took place at Stromboli volcano during the summer 2019, causing widespread fires, consistent damages across the island, injuries and one fatality. Prediction of similar events is really challenging for the modern volcanology, though models propaedeutic to early-warning monitoring systems are not properly assessed yet in many volcanoes worldwide. Here, we present a multi-parametric study that combines petrological and geophysical data to investigate processes generating the two paroxysms. The time information derived by Li enrichments in plagioclase crystals correlates with tilt time series derived by seismometers installed on the island, highlighting the dominant role of shallow conduit processes in triggering the 2019 paroxysmal activity. Our dataset conceives a mechanism of gas slug formation and fast upward migration that finally triggered the eruptions in very limited times. The proposed model questions our capability to forecast such kind of paroxysms in times that are rapid enough to allow mitigation of the associated risk.
Analysis of the properties of a glass/sisal/polyester composite
Authors: Baloyi Rivalani B. , Ncube Sizo , Moyo Mufaro , Nkiwane Londiwe , Dzingai Pethile
Published: January 2021

Composites are gradually becoming an integral material for structural and manufacturing processes. Sisal fibre has the potential to be one of the leading reinforcement natural fibres, not only in Zimbabwe, but the world over for use in glass composites. This is mainly due to it being inexpensive, exhibiting a low density, high specific strength, a high stiffness to weight ratio, non-toxicity, its abundance in Zimbabwe and its renewability. With an aim of coming up with a composite for partition board applications in the construction industry, five samples of sisal-glass composite were prepared with varying sisal fibre content and different layering techniques. Sisal fibres were pre-treated with 20% NaOH to enhance their crosslinking with the resin and reduce the chemical impurities such as lignin and waxes. Mechanical (flexural test, hardness, and tensile strength) and physical tests (density and water absorption) were conducted to analyse the properties of the composite. The results showed that treated sisal fibres had a higher breaking tenacity of 33.11 g/tex which is higher than untreated fibres with a breaking tenacity of 25.72 g/tex. The best properties were obtained in the sample with 4 layers of glass and 9 layers of sisal fibres using 200 ml of resin. The composite had a tensile strength of 57.60 MPa, flexural strength of 36 N/mm2, moisture absorption of 10% and a burning rate of 9.82 mm/min. These results were then compared with those of the current partition boards in the market. It was noted that the composite was suitable for use in partition boards. Again, regarding cost, these composites are cheaper to produce at a rate of $11.33/m2 compared to the timber costing at $16/m2.
Early impact of donor CYP3A5 genotype and Graft-to-Recipient Weight Ratio on tacrolimus pharmacokinetics in pediatric liver transplant patients
Authors: Pinon Michele , De Nicolò Amedeo , Pizzol Antonio , Antonucci Miriam , D’Avolio Antonio , Serpe Loredana , Dell’Olio Dominic , Catalano Silvia , Tandoi Francesco , Romagnoli Renato , Canaparo Roberto , Calvo Pier Luigi
Published: January 2021

Tacrolimus (TAC) pharmacokinetics is influenced by the donorCYP3A5genotype and the age of pediatric liver recipients. However, an optimization of a genotype-based algorithm for determining TAC starting is needed to earlier achieve stable target levels. As the graft itself is responsible for its metabolism, the Graft-to-Recipient Weight Ratio (GRWR) might play a role in TAC dose requirements. A single-center study was carried out in a cohort of 49 pediatric recipients to analyse the impact of patient and graft characteristics on TAC pharmacokinetics during the first 15 post-transplant days. Children < 2 years received grafts with a significantly higher GRWR (4.2%) than children between 2–8 (2.6%) and over 8 (2.7%). TAC concentration/weight-adjusted dose ratio was significantly lower in recipients fromCYP3A5*1/*3donors or with extra-large (GRWR > 5%) or large (GRWR 3–5%) grafts. The donorCYP3A5genotype and GRWR were the only significant predictors of the TAC weight adjusted doses. Patients with a GRWR > 4% had a higher risk of acute rejection, observed in 20/49 (41%) patients. In conclusion, TAC starting dose could be guided according to the donorCYP3A5genotype and GRWR, allowing for a quicker achievement of target concentrations and eventually reducing the risk of rejection.
Long-term follow-up study on surgical outcomes of the Faden operation in consecutive esotropia
Authors: Ha Suk-Gyu , Kim Seung-Hyun
Published: January 2021

We evaluated the long-term surgical outcomes of medial rectus (MR) recession with the Faden operation in consecutive esotropia (CET). We retrospectively analyzed patients who underwent MR recession with the Faden operation for CET between 2013 and 2018, and compared surgical outcomes between patients who underwent MR recession with the Faden operation (Faden group) and MR recession only (control group). We followed up the patients at 24 months postoperatively. Postoperative success was defined as final deviation of less than distant 5 prism diopters (PD) of eso- or exodeviation at the final visit. We compared postoperative alignment and stereoacuity between the two groups. Stereoacuity was classified as good (60 or better seconds of arc), fair (80–3000 s of arc) or nil. The Faden and control group included 11 and 13 patients, respectively. All patients in the Faden group showed orthophoria and eight patients (72.7%) showed good stereoacuity at the final visit. One patient (9.1%) in the Faden group showed adduction limitation at the final visit. Eight patients (61.5%) in the control group had successful outcomes at the final visit. Six patients (46.2%) in the control group showed good stereoacuity at the final visit. One patient (7.7%) in the control group underwent reoperation for recurrent esotropia at 18 months postoperatively. The surgical outcomes after MR recession with the Faden operation for CET were excellent in long-term follow- up. The Faden operation could be a good surgical option for CET.
Maternal high-fat-diet exposure is associated with elevated blood pressure and sustained increased leptin levels through epigenetic memory in offspring
Authors: Lin Xian-Hua , Gao Ling , Tian Shen , Klausen Christian , Guo Meng-Xi , Gao Qian , Liu Miao-E. , Wang Hui , Wu Dan-Dan , Zhou Cheng-Liang , Yang Jing , Meng Ye , Liu Ye , Xu Gu-Feng , Tan Ya-Jing , Ullah Kamran , Zhu Yi-Min , Fraser William D. , Sheng Jian-Zhong , Leung Peter C. K. , Muglia Louis J. , Wu Yan-Ting , Huang He-Feng
Published: January 2021

Maternal metabolism dysregulation during pregnancy predisposes offspring to major diseases, including hypertension, in later life, but the mechanism involved remains to be fully elucidated. A high-fat-diet (HFD) pregnant rat model was used to investigate whether excessive intrauterine lipid exposure was associated with elevated blood pressure in offspring and increased levels of leptin, an important biomarker and mediator of vascular dysfunction and hypertension. We found that gestational hyperlipidemia predisposed offspring to blood pressure elevation and sustained increases in leptin levels with no difference in body weight in the rat model. Increased leptin expression and leptin promoter hypomethylation were found in adipose tissues of HFD-exposed offspring. The treatment of mesenchymal stem cells with free fatty acids during adipogenic differentiation resulted in increased leptin expression, accompanied by leptin promoter hypomethylation. In addition, we also followed up 121 children to evaluate the association between maternal triglyceride levels and offspring blood pressure. Consistent with the animal study results, we observed elevated serum leptin levels and blood pressure in the offspring born to women with gestational hypertriglyceridemia. Our findings provide new insights that maternal hyperlipidemia is associated with elevated blood pressure in offspring and is associated with increases in leptin levels through epigenetic memory.
Movement detection thresholds reveal proprioceptive impairments in developmental dyslexia
Authors: Laprevotte Julie , Papaxanthis Charalambos , Saltarelli Sophie , Quercia Patrick , Gaveau Jeremie
Published: January 2021

Developmental dyslexia is associated with vision and hearing impairments. Whether these impairments are causes or comorbidities is controversial. Because both senses are heavily involved in reading, cognitive theories argue that sensory impairments are comorbidities that result from a lack of reading practice. Sensory theories instead argue that this is sensory impairments that cause reading disabilities. Here we test a discriminant prediction: whether sensory impairments in developmental dyslexia are restrained to reading-related senses or encompass other senses. Sensory theories predict that all senses are affected, whereas, according to the lack of reading practice argument, cognitive theories predict that only reading-related senses are affected. Using a robotic ergometer and fully automatized analyses, we tested proprioceptive acuity in seventeen dyslexic children and seventeen age-matched controls on a movement detection task. Compared to controls, dyslexics had higher and more variable detection thresholds. For the weakest proprioceptive stimuli, dyslexics were twice as long and twice as variable as controls. More, proprioceptive acuity strongly correlated with reading abilities, as measured by blind cognitive evaluations. These results unravel a new sensory impairment that cannot be attributed to a lack of reading practice, providing clear support to sensory theories of developmental dyslexia. Protocol registration: This protocol is part of the following registration, ClinicalTrials.gov Identifier: NCT03364010; December 6, 2017.
Ascending dorsal column sensory neurons respond to spinal cord injury and downregulate genes related to lipid metabolism
Authors: Ewan Eric E. , Avraham Oshri , Carlin Dan , Gonçalves Tassia Mangetti , Zhao Guoyan , Cavalli Valeria
Published: January 2021

Regeneration failure after spinal cord injury (SCI) results in part from the lack of a pro-regenerative response in injured neurons, but the response to SCI has not been examined specifically in injured sensory neurons. Using RNA sequencing of dorsal root ganglion, we determined that thoracic SCI elicits a transcriptional response distinct from sciatic nerve injury (SNI). Both SNI and SCI induced upregulation of ATF3 and Jun, yet this response failed to promote growth in sensory neurons after SCI. RNA sequencing of purified sensory neurons one and three days after injury revealed that unlike SNI, the SCI response is not sustained. Both SCI and SNI elicited the expression of ATF3 target genes, with very little overlap between conditions. Pathway analysis of differentially expressed ATF3 target genes revealed that fatty acid biosynthesis and terpenoid backbone synthesis were downregulated after SCI but not SNI. Pharmacologic inhibition of fatty acid synthase, the enzyme generating palmitic acid, decreased axon growth and regeneration in vitro. These results support the notion that decreased expression of lipid metabolism-related genes after SCI, including fatty acid synthase, may restrict axon regenerative capacity after SCI.
epihet for intra-tumoral epigenetic heterogeneity analysis and visualization
Authors: Chen Xiaowen , Ashoor Haitham , Musich Ryan , Wang Jiahui , Zhang Mingsheng , Zhang Chao , Lu Mingyang , Li Sheng
Published: January 2021

Intra-tumoral epigenetic heterogeneity is an indicator of tumor population fitness and is linked to the deregulation of transcription. However, there is no published computational tool to automate the measurement of intra-tumoral epigenetic allelic heterogeneity. We developed an R/Bioconductor package, epihet, to calculate the intra-tumoral epigenetic heterogeneity and to perform differential epigenetic heterogeneity analysis. Furthermore, epihet can implement a biological network analysis workflow for transforming cancer-specific differential epigenetic heterogeneity loci into cancer-related biological function and clinical biomarkers. Finally, we demonstrated epihet utility on acute myeloid leukemia. We found statistically significant differential epigenetic heterogeneity (DEH) loci compared to normal controls and constructed co-epigenetic heterogeneity network and modules. epihet is available at https://bioconductor.org/packages/release/bioc/html/epihet.html.
Increased planting density combined with reduced nitrogen rate to achieve high yield in maize
Authors: Du Xiangbei , Wang Zhi , Lei Weixia , Kong Lingcong
Published: January 2021

The combination effects of nitrogen (N) fertilizer and planting density on maize yield, N use efficiency and the characteristics of canopy radiation capture and radiation use efficiency are not well documented in the Huanghuaihai Plain region in China. A 2-year field experiment was conducted from 2017 to 2018 in a split plot design with two N levels (240 and 204 kg N ha−1) applied to main plots and three plant densities (67,500, 77,625 and 87,750 plants ha−1) allocated to sub plots. Our results show that a 30% greater plant density combined with a 15% lower N rate (basal N) enhanced N partial factor productivity (NPFP) by 24.7% and maize grain yield by 6.6% compared with those of the conventional high N rate combined with a low density planting management practice. The yield increase was mainly attributed to significantly increased kernel numbers and biomass. The increased intercepted photosynthetically active radiation (IPAR) was the primary factor responsible for the high productivity of maize at increased planting density under reduced N conditions. The results indicate that increase planting density with reduced basal N application might benefit maize cropping for achieving high yields and sustainable development of agriculture.
Individual-oocyte transcriptomic analysis shows that genotoxic chemotherapy depletes human primordial follicle reserve in vivo by triggering proapoptotic pathways without growth activation
Authors: Titus S. , Szymanska K. J. , Musul B. , Turan V. , Taylan E. , Garcia- Milian R. , Mehta S. , Oktay K.
Published: January 2021

Gonadotoxic chemotherapeutics, such as cyclophosphamide, can cause early menopause and infertility in women. Earlier histological studies showed ovarian reserve depletion via severe DNA damage and apoptosis, but others suggested activation of PI3K/PTEN/Akt pathway and follicle ‘burn-out’ as a cause. Using a human ovarian xenograft model, we performed single-cell RNA-sequencing on laser-captured individual primordial follicle oocytes 12 h after a single cyclophosphamide injection to determine the mechanisms of acute follicle loss after gonadotoxic chemotherapy. RNA-sequencing showed 190 differentially expressed genes between the cyclophosphamide- and vehicle-exposed oocytes. Ingenuity Pathway Analysis predicted a significant decrease in the expression of anti-apoptotic pro-AktPECAM1(p = 2.13E-09),IKBKE(p = 0.0001), andANGPT1(p = 0.003), and reduced activation of PI3K/PTEN/Akt after cyclophosphamide. The qRT-PCR and immunostaining confirmed that in primordial follicle oocytes, cyclophosphamide did not change the expressions ofAkt(p = 0.9),rpS6(p = 0.3),Foxo3a(p = 0.12) and anti-apoptoticBcl2(p = 0.17), nor affect their phosphorylation status. There was significantly increased DNA damage by γH2AX (p = 0.0002) and apoptosis by active-caspase-3 (p = 0.0001) staining in the primordial follicles and no change in the growing follicles 12 h after chemotherapy. These data support that the mechanism of acute follicle loss by cyclophosphamide is via apoptosis, rather than growth activation of primordial follicle oocytes in the human ovary.
HERC2 inactivation abrogates nucleolar localization of RecQ helicases BLM and WRN
Authors: Zhu Mingzhang , Wu Wenwen , Togashi Yukiko , Liang Weixin , Miyoshi Yasuo , Ohta Tomohiko
Published: January 2021

The nucleolus is a nuclear structure composed of ribosomal DNA (rDNA), and functions as a site for rRNA synthesis and processing. The rDNA is guanine-rich and prone to form G-quadruplex (G4), a secondary structure of DNA. We have recently found that HERC2, an HECT ubiquitin ligase, promotes BLM and WRN RecQ DNA helicases to resolve the G4 structure. Here, we report the role of HERC2 in the regulation of nucleolar localization of the helicases. Furthermore, HERC2 inactivation enhances the effects of CX-5461, an inhibitor of RNA polymerase I (Pol I)-mediated transcription of rRNA with an intrinsic G4-stabilizing activity. HERC2 depletion or homozygous deletion of the C-terminal HECT domain of HERC2 prevented the nucleolar localization of BLM and WRN, and inhibited relocalization of BLM to replication stress-induced nuclear RPA foci. HERC2 colocalized with fibrillarin and Pol I subunit RPA194, both of which are required for rRNA transcription. The HERC2 dysfunction enhanced the suppression of pre-rRNA transcription by CX-5461. These results suggest the effect of HERC2 status on the functions of BLM and WRN on rRNA transcription in the nucleolus. Since HERC2 is downregulated in numerous cancers, this effect may be clinically relevant considering the beneficial effects of CX-5461 in cancer treatments.
Bidirectional causal control in the dynamics of handstand balance
Authors: Wyatt Hannah E. , Vicinanza Domenico , Newell Karl M. , Irwin Gareth , Williams Genevieve K. R.
Published: January 2021

The aim of this study was to identify motor control solutions associated with the ability to maintain handstand balance. Using a novel approach, we investigated the dynamical interactions between centre of pressure (CoP) and centre of mass (CoM) motion. A gymnastics cohort was divided into a ‘less skilled’ group, who held handstands for 4–6 s, and a ‘more skilled’ group, who held handstands in excess of 10 s. CoP–CoM causality was investigated in anterior–posterior (AP) and medio-lateral (ML) directions, in addition to time–space, time–frequency and Hurst Exponent (H) analyses. Lower AP CoP to CoM causal drive and lowerHvalues (> 0.6) indicated the more skilled gymnasts were less reliant on CoP mechanics to drive CoM motion. More skilled performance demonstrated greater adaptability through use of reactive, as opposed to anticipatory, control strategies. Skilled performers additionally exploited mechanical advantages in ML (e.g. a wider base of support), compared to the less skilled athletes. A multiple regression analysis revealedHand frequency domain measures to be better predictors of handstand balance duration than time–space domain measures. The study findings highlight the advantage of an adaptable motor control system with a directional profile, and provide new insight into the clear, measurable footprint of CoP on the dynamics of CoM.
BIRC5 is a prognostic biomarker associated with tumor immune cell infiltration
Authors: Xu Linlong , Yu Wenpeng , Xiao Han , Lin Kang
Published: January 2021

BIRC5 is an immune-related gene that inhibits apoptosis and promotes cell proliferation. It is highly expressed in most tumors and leads to poor prognosis in cancer patients. This study aimed to analyze the relationship between the expression level of BIRC5 in different tumors and patient prognosis, clinical parameters, and its role in tumor immunity. Genes co-expressed with BIRC5 were analyzed, and functional enrichment analysis was performed. The relationship between BIRC5 expression and the immune and stromal scores of tumors in pan-cancer patients and the infiltration level of 22 tumor-infiltrating lymphocytes (TILs) was analyzed. The correlation of BIRC5 with immune checkpoints was conducted. Functional enrichment analysis showed that genes co-expressed with BIRC5 were significantly associated with the mitotic cell cycle, APC/C-mediated degradation of cell cycle proteins, mitotic metaphase, and anaphase pathways. Besides, the high expression of BIRC5 was significantly correlated with the expression levels of various DNA methyltransferases, indicating that BIRC5 regulates DNA methylation. We also found that BIRC5 was significantly correlated with multiple immune cells infiltrates in a variety of tumors. This study lays the foundation for future research on how BIRC5 modulates tumor immune cells, which may lead to the development of more effective targeted tumor immunotherapies.
Defining a therapeutic range for regeneration of ischemic myocardium via shock waves
Authors: Pölzl Leo , Nägele Felix , Hirsch Jakob , Graber Michael , Lobenwein Daniela , Kirchmair Elke , Huber Rosalie , Dorfmüller Christian , Lechner Sophia , Schäfer Georg , Hermann Martin , Fritsch Helga , Tancevski Ivan , Grimm Michael , Holfeld Johannes , Gollmann-Tepeköylü Can
Published: January 2021

Shockwave therapy (SWT) represents a promising regenerative treatment option for patients with ischemic cardiomyopathy. Although no side-effects have been described upon SWT, potential cellular damage at therapeutic energies has not been addressed so far. In this work, we aimed to define a therapeutic range for shock wave application for myocardial regeneration. We could demonstrate that SWT does not induce cellular damage beneath energy levels of 0.27 mJ/mm2 total flux density. Endothelial cell proliferation, angiogenic gene expression and phosphorylation of AKT and ERK are enhanced in a dose dependent manner until 0.15 mJ/mm2 energy flux density. SWT induces regeneration of ischemic muscle in vivo via expression of angiogenic gene expression, enhanced neovascularization and improved limb perfusion in a dose-dependent manner. Therefore, we provide evidence for a dose-dependent induction of angiogenesis after SWT, as well as the absence of cellular damage upon SWT within the therapeutic range. These data define for the first time a therapeutic range of SWT, a promising regenerative treatment option for ischemic cardiomyopathy.
A functional interaction between GRP78 and Zika virus E protein
Authors: Khongwichit Sarawut , Sornjai Wannapa , Jitobaom Kunlakanya , Greenwood Mingkwan , Greenwood Michael P. , Hitakarun Atitaya , Wikan Nitwara , Murphy David , Smith Duncan R.
Published: January 2021

Zika virus (ZIKV) is a mosquito-transmitted virus that has caused significant public health concerns around the world, partly because of an association with microcephaly in babies born to mothers who were infected with ZIKV during pregnancy. As a recently emerging virus, little is known as to how the virus interacts with the host cell machinery. A yeast-2-hybrid screen for proteins capable of interacting with the ZIKV E protein domain III, the domain responsible for receptor binding, identified 21 proteins, one of which was the predominantly ER resident chaperone protein GRP78. The interaction of GRP78 and ZIKV E was confirmed by co-immunoprecipitation and reciprocal co-immunoprecipitation, and indirect immunofluorescence staining showed intracellular and extracellular co-localization between GRP78 and ZIKV E. Antibodies directed against the N-terminus of GRP78 were able to inhibit ZIKV entry to host cells, resulting in significant reductions in the levels of ZIKV infection and viral production. Consistently, these reductions were also observed after down-regulation of GRP78 by siRNA. These results indicate that GRP78 can play a role mediating ZIKV binding, internalization and replication in cells. GRP78 is a main regulator of the unfolded protein response (UPR), and the study showed that expression of GRP78 was up-regulated, and the UPR was activated. Increases in CHOP expression, and activation of caspases 7 and 9 were also shown in response to ZIKV infection. Overall these results indicate that the interaction between GRP78 and ZIKV E protein plays an important role in ZIKV infection and replication, and may be a potential therapeutic target.
Cigarette smoke-induced impairment of autophagy in macrophages increases galectin-8 and inflammation
Authors: Kono Yuta , Colley Thomas , To Masako , Papaioannou Andriana I. , Mercado Nicolas , Baker Jonathan R. , To Yasuo , Abe Shinji , Haruki Kosuke , Ito Kazuhiro , Barnes Peter J.
Published: January 2021

Cigarette smoke impairs autophagy, an intracellular protein degradation system, but the consequences of this defect have not been fully elucidated, especially in macrophages. Dysfunctional alveolar macrophages play an important role in chronic obstructive pulmonary disease (COPD). Here we show that galectin-8, a danger receptor that identifies damaged intracellular host vesicles and initiates autophagosome engulfment, is elevated due to activation of autophagy by cigarette smoke extract (CSE) in macrophages. CSE impaired autophagic flux in PMA-differentiated U937 macrophage-like cells, resulting in intracellular accumulation of galectin-8 and the autophagic adaptor protein NDP52. COPD patients showed elevated levels of galectin-8 and NDP52 in the lung homogenates with significant increase in the serum galectin-8 levels in patients with frequent acute exacerbations. Soluble galectin-8 induced interleukin (IL)-6 release in bronchial epithelial cells via PI3Kα signalling. Thus, increased galectin-8 due to CSE-induced impaired autophagy may be involved in the pathogenesis of COPD and may be a biomarker of this disease.
Safe and effective aerosolization of in vitro transcribed mRNA to the respiratory tract epithelium of horses without a transfection agent
Authors: Legere Rebecca M. , Cohen Noah D. , Poveda Cristina , Bray Jocelyne M. , Barhoumi Rola , Szule Joseph A. , de la Concha-Bermejillo Andrés , Bordin Angela I. , Pollet Jeroen
Published: January 2021

Vaccines and therapeutics using in vitro transcribed mRNA hold enormous potential for human and veterinary medicine. Transfection agents are widely considered to be necessary to protect mRNA and enhance transfection, but they add expense and raise concerns regarding quality control and safety. We found that such complex mRNA delivery systems can be avoided when transfecting epithelial cells by aerosolizing the mRNA into micron-sized droplets. In an equine in vivo model, we demonstrated that the translation of mRNA into a functional protein did not depend on the addition of a polyethylenimine (PEI)-derived transfection agent. We were able to safely and effectively transfect the bronchial epithelium of foals using naked mRNA (i.e., mRNA formulated in a sodium citrate buffer without a delivery vehicle). Endoscopic examination of the bronchial tree and histology of mucosal biopsies indicated no gross or microscopic adverse effects of the transfection. Our data suggest that mRNA administered by an atomization device eliminates the need for chemical transfection agents, which can reduce the cost and the safety risks of delivering mRNA to the respiratory tract of animals and humans.
Application of hyperspectral remote sensing for supplementary investigation of polymetallic deposits in Huaniushan ore region, northwestern China
Authors: Wan Yu-qing , Fan Yu-hai , Jin Mou-shun
Published: January 2021

A gold–silver–lead–zinc polymetallic ore was selected in Huaniushan, Gansu Province as the study area. Hyperspectral aerial images as the primary information source, ground spectrum tests, and sampling analysis were used as auxiliary techniques. They were combined with large-scale mineral and geological maps and other high-resolution satellite remote sensing images. Hyperspectral remote sensing classification identification and quantitative analysis methods were used to study the main mineral resources and rock mass occurrence. Finally, deposit distribution information was extracted and validated. The results showed that the effective classification methods by hyperspectral images were spectral angle mapping, minimum noise fraction transform, and mixed tuned matched filtering. Based on the ground survey, combined with sampling analysis, the accuracy of classification was 80%. The recognition rate of the main ore body—the iron-manganese cap lead–zinc oxide ore—was as high as 81%. This research showed that hyperspectral remote sensing in this mining area has excellent demonstration effects and is worth completing and supplementing original mineral and geological maps. The targets are important areas for detailed follow-up on mineral resource exploration.
Canadian undergraduate men’s visual attention to cisgender women, cisgender men, and feminine trans individuals
Authors: Petterson Lanna J. , Vasey Paul L.
Published: January 2021

Some heterosexual men express sexual interest in feminine trans individuals with penises. It is possible that this interest arises from a tendency for heterosexual men to be sexually responsive to gender in addition to sex. We compared the self-reported sexual attraction and visual attention patterns of Canadian undergraduate heterosexual men (N = 51) and gay men (N = 20) to nude images of feminine trans individuals with penises, cisgender men, and cisgender women. Heterosexual men were most attracted to cisgender women and fixated on them the longest. However, they were more attracted to feminine trans individuals with penises than to cisgender men. They also biased their attention to feminine trans individuals with penises over cisgender men. This pattern was unique to heterosexual men. Gay men were most attracted to cisgender men and allocated the most visual attention to them. They responded to feminine trans individuals and cisgender women in a relatively similar manner. As such, heterosexual men appear to be responsive to sex and gender, which may account for sexual interest in feminine trans individuals among some heterosexual men.
The interaction between self-care behavior and disease knowledge on the decline in renal function in chronic kidney disease
Authors: Tsai Yi-Chun , Wang Shu-Li , Tsai Hui-Ju , Chen Tzu-Hui , Kung Lan-Fang , Hsiao Pei-Ni , Hsiao Shih-Ming , Hwang Shang-Jyh , Chen Hung-Chun , Chiu Yi-Wen
Published: January 2021

Multidisciplinary care can improve the outcomes of chronic kidney disease (CKD), however the contribution of self-care behavior and knowledge about CKD is unclear. This study enrolled 454 participants with CKD stages 1–5 not on dialysis. Structured questionnaires were used to evaluate self-care behavior and kidney disease knowledge. Rapid decline in renal function was defined as the decline in estimated filtration rate > 3 ml/min per 1.73 m2/year within 1-year prior to enrollment. The mean age of all study participants was 65.8 ± 12.1 years and 55.9% were male. The elderly had better self-care behavior while younger participants had better disease knowledge. Both high self-care and high disease knowledge scores were significantly associated with and had a synergistic effect on decreasing the risk of rapid decline in renal function. CKD patients with better self-care behavior and better kidney disease knowledge had lower risk of rapid decline in renal function.
GVES: machine learning model for identification of prognostic genes with a small dataset
Authors: Ko Soohyun , Choi Jonghwan , Ahn Jaegyoon
Published: January 2021

Machine learning may be a powerful approach to more accurate identification of genes that may serve as prognosticators of cancer outcomes using various types of omics data. However, to date, machine learning approaches have shown limited prediction accuracy for cancer outcomes, primarily owing to small sample numbers and relatively large number of features. In this paper, we provide a description of GVES (Gene Vector for Each Sample), a proposed machine learning model that can be efficiently leveraged even with a small sample size, to increase the accuracy of identification of genes with prognostic value. GVES, an adaptation of the continuous bag of words (CBOW) model, generates vector representations of all genes for all samples by leveraging gene expression and biological network data. GVES clusters samples using their gene vectors, and identifies genes that divide samples into good and poor outcome groups for the prediction of cancer outcomes. Because GVES generates gene vectors for each sample, the sample size effect is reduced. We applied GVES to six cancer types and demonstrated that GVES outperformed existing machine learning methods, particularly for cancer datasets with a small number of samples. Moreover, the genes identified as prognosticators were shown to reside within a number of significant prognostic genetic pathways associated with pancreatic cancer.
Clinical characteristics and long-term prognosis of autoimmune pancreatitis with renal lesions
Authors: Ishikawa Takuya , Kawashima Hiroki , Ohno Eizaburo , Iida Tadashi , Suzuki Hirotaka , Uetsuki Kota , Yashika Jun , Yamada Kenta , Yoshikawa Masakatsu , Gibo Noriaki , Aoki Toshinori , Kataoka Kunio , Mori Hiroshi , Yamamura Takeshi , Furukawa Kazuhiro , Nakamura Masanao , Hirooka Yoshiki , Fujishiro Mitsuhiro
Published: January 2021

Autoimmune pancreatitis (AIP) is recognized as the pancreatic manifestation of a systemic IgG4-related disease that can involve various organs, including the kidney. However, renal lesions tend to be overlooked when AIP is diagnosed, and the clinical characteristics and long-term prognosis of AIP with renal lesions are unclear. We retrospectively reviewed 153 patients with AIP diagnosed at our hospital with a median follow-up period of 41 months (interquartile range, 10–86) and classified them into two groups: the KD group (n = 17), with characteristic renal imaging features, and the non-KD group (n = 136). Serum IgG4 levels were significantly higher in the KD group (663 vs. 304.5 mg/dl, P = 0.014). No differences were observed between the two groups in terms of steroid treatment [14/17 (82.4%) vs. 112/136 (82.4%), P = 1] or in the number of patients who exhibited exacerbation of renal function during treatment [1/17 (5.9%) vs. 8/136 (5.9%), P = 1]. However, the cumulative relapse rate was significantly higher in the KD group [61% vs. 21.9% (3 years), P < 0.001]. Patients in the KD group had different clinical features with high relapse rates compared with those in the non-KD group, and thus, it is important to confirm the presence of renal lesions in AIP patients.
Awareness of voluntary action, rather than body ownership, improves motor control
Authors: Matsumiya Kazumichi
Published: January 2021

Awareness of the body is essential for accurate motor control. However, how this awareness influences motor control is poorly understood. The awareness of the body includes awareness of visible body parts as one’s own (sense of body ownership) and awareness of voluntary actions over that visible body part (sense of agency). Here, I show that sense of agency over a visible hand improves the initiation of movement, regardless of sense of body ownership. The present study combined the moving rubber hand illusion, which allows experimental manipulation of agency and body ownership, and the finger-tracking paradigm, which allows behavioral quantification of motor control by the ability to coordinate eye with hand movements. This eye–hand coordination requires awareness of the hand to track the hand with the eye. I found that eye–hand coordination is improved when participants experience a sense of agency over a tracked artificial hand, regardless of their sense of body ownership. This improvement was selective for the initiation, but not maintenance, of eye–hand coordination. These results reveal that the prospective experience of explicit sense of agency improves motor control, suggesting that artificial manipulation of prospective agency may be beneficial to rehabilitation and sports training techniques.
Self-diffusion in garnet-type Li7La3Zr2O12 solid electrolytes
Authors: Kuganathan Navaratnarajah , Rushton Michael J. D. , Grimes Robin W. , Kilner John A. , Gkanas Evangelos I. , Chroneos Alexander
Published: January 2021

Tetragonal garnet-type Li7La3Zr2O12 is an important candidate solid electrolyte for all-solid-state lithium ion batteries because of its high ionic conductivity and large electrochemical potential window. Here we employ atomistic simulation methods to show that the most favourable disorder process in Li7La3Zr2O12 involves loss of Li2O resulting in lithium and oxygen vacancies, which promote vacancy mediated self-diffusion. The activation energy for lithium migration (0.45 eV) is much lower than that for oxygen (1.65 eV). Furthermore, the oxygen migration activation energy reveals that the oxygen diffusion in this material can be facilitated at higher temperatures once oxygen vacancies form.
Topologically distinct Weyl fermion pairs
Authors: Hsu Ming-Chien , Lin Hsin , Hasan M. Zahid , Huang Shin-Ming
Published: January 2021

A Weyl semimetal has Weyl nodes that always come in pairs with opposite chiralities. Notably, different ways of connection between nodes are possible and would lead to distinct topologies. Here we identify their differences in many respects from two proposed models with different vorticities. One prominent feature is the behaviour of zeroth Landau levels (LLs) under magnetic field. We demonstrate that the magnetic tunneling does not always expel LLs from zero energy because the number of zero-energy modes is protected by the vorticity of the Weyl nodes, instead of the chirality. Other respects in disorder effects for weak (anti-)localization, surface Fermi arcs, and Weyl-node annihilation, are interesting consequences that await more investigation in the future.
The hypoxia-sensor carbonic anhydrase IX affects macrophage metabolism, but is not a suitable biomarker for human cardiovascular disease
Authors: Demandt J. A. F. , Dubois L. J. , van Kuijk K. , Zaťovičová M. , Jin H. , Parkkila S. , van der Laan S. W. , Jelenska L. , Mees B. M. E. , Reutelingsperger C. P. M. , Cleutjens K. B. J. M. , van der Kallen C. J. H. , Schalkwijk C. G. , van Greevenbroek M. M. J. , Biessen E. A. L. , Pasterkamp G. , Pastoreková S. , Stehouwer C. D. A. , Sluimer J. C.
Published: January 2021

Hypoxia is prevalent in atherosclerotic plaques, promoting plaque aggravation and subsequent cardiovascular disease (CVD). Transmembrane protein carbonic anhydrase IX (CAIX) is hypoxia-induced and can be shed into the circulation as soluble CAIX (sCAIX). As plaque macrophages are hypoxic, we hypothesized a role for CAIX in macrophage function, and as biomarker of hypoxic plaque burden and CVD. As tumor patients with probable CVD are treated with CAIX inhibitors, this study will shed light on their safety profile. CAIX co-localized with macrophages (CD68) and hypoxia (pimonidazole), and correlated with lipid core size and pro-inflammatory iNOS+ macrophages in unstable human carotid artery plaques. Although elevated pH and reduced lactate levels in culture medium of CAIX knock-out (CAIXko) macrophages confirmed its role as pH-regulator, only spare respiratory capacity of CAIXko macrophages was reduced. Proliferation, apoptosis, lipid uptake and expression of pro- and anti-inflammatory genes were not altered. Plasma sCAIX levels and plaque-resident CAIX were below the detection threshold in 50 and 90% of asymptomatic and symptomatic cases, respectively, while detectable levels did not associate with primary or secondary events, or intraplaque hemorrhage. Initial findings show that CAIX deficiency interferes with macrophage metabolism. Despite a correlation with inflammatory macrophages, plaque-resident and sCAIX expression levels are too low to serve as biomarkers of future CVD.
Rapid processing of fearful faces relies on the right amygdala: evidence from individuals undergoing unilateral temporal lobectomy
Authors: Framorando David , Moses Eleanor , Legrand Lore , Seeck Margitta , Pegna Alan J.
Published: January 2021

Facial expressions of emotions have been shown to modulate early ERP components, in particular the N170. The underlying anatomical structure producing these early effects are unclear. In this study, we examined the N170 enhancement for fearful expressions in healthy controls as well as epileptic patients after unilateral left or right amygdala resection. We observed a greater N170 for fearful faces in healthy participants as well as in individuals with left amygdala resections. By contrast, the effect was not observed in patients who had undergone surgery in which the right amygdala had been removed. This result demonstrates that the amygdala produces an early brain response to fearful faces. This early response relies specifically on the right amygdala and occurs at around 170 ms. It is likely that such increases are due to a heightened response of the extrastriate cortex that occurs through rapid amygdalofugal projections to the visual areas.
In-vivo measurement of the fluorescence spectrum of wild cochineal (Dactylopius opuntiae)
Authors: Cárdenas Rosales Alejandra , Delgado Atencio José Alberto , Cunill Rodríguez Margarita , González Gutiérrez Enrique
Published: January 2021

It is known that the harmful presence of the wild cochineal (Dactylopius opuntiae), unlike the fine cochineal (Dactylopius coccus), in prickly pear crops of farmers leads to consider it as one of the major pests for this crop. In this study, we present the implementation of an optical setup that ensures the measurement of the in-vivo fluorescence spectra of wild cochineals ranging in size from 440 to 1190 µm in their natural habitat achieved by developing a reproduction model adopted from available literature. It was observed that in-vivo fluorescence spectra of these insects were comprised in the spectral region of 570–760 nm, showing a proportional dependence between the fluorescence intensity emitted and the cochineal size. In addition, we have considered other spectral parameters to perform the comparison between fluorescence spectra of the different cochineal sizes. These results provide the basis for the development of novel methodologies and equipment aimed towards the early detection of this pest in prickly pear crops from its early growth stages (nymph I and II).
Gut microbiota dynamics in carnivorous European seabass (Dicentrarchus labrax) fed plant-based diets
Authors: Serra Cláudia R. , Oliva-Teles Aires , Enes Paula , Tavares Fernando
Published: January 2021

A healthy gastrointestinal microbiota is essential for host fitness, and strongly modulated by host diet. In aquaculture, a current challenge is to feed carnivorous fish with plant-feedstuffs in substitution of fish meal, an unsustainable commodity. Plants have a limited nutritive value due to the presence of non-starch polysaccharides (NSP) which are not metabolized by fish. In this work we assessed the effects of NSP-enriched diets on European seabass gut microbiota and evaluate the selective pressure of plant feedstuffs towards gut microbes with NSP-hydrolytic potential, i.e. capable to convert indigestible dietary constituents in fish metabolites. Triplicate groups of European seabass juveniles were fed a fish meal-based diet (control) or three plant-based diets (SBM, soybean meal; RSM, rapeseed meal; SFM, sunflower meal) for 6 weeks, before recovering intestinal samples for microbiota analysis, using the Illumina’s MiSeq platform. Plant-based diets impacted differently digesta and mucosal microbiota. A decrease (p = 0.020) on species richness, accompanied by a decline on the relative abundance of specific phyla such as Acidobacteria (p = 0.030), was observed in digesta samples of SBM and RSM experimental fish, but no effects were seen in mucosa-associated microbiota. Plant-based diets favored the Firmicutes (p = 0.01), in particular the Bacillaceae (p = 0.017) and Clostridiaceae (p = 0.007), two bacterial families known to harbor carbohydrate active enzymes and thus putatively more prone to grow in high NSP environments. Overall, bacterial gut communities of European seabass respond to plant-feedstuffs with adjustments in the presence of transient microorganisms (allochthonous) with carbohydrolytic potential, while maintaining a balanced core (autochthonous) microbiota.
Association of the triglyceride and glucose index with low muscle mass: KNHANES 2008–2011
Authors: Kim Jung A. , Hwang Soon Young , Yu Ji Hee , Roh Eun , Hong So-hyeon , Lee You-Bin , Kim Nam Hoon , Yoo Hye Jin , Seo Ji A. , Kim Nan Hee , Kim Sin Gon , Baik Sei Hyun , Choi Kyung Mook
Published: January 2021

The triglyceride-glucose (TyG) index is a simple surrogate marker of insulin resistance. We evaluated the association of the TyG index with low muscle mass using a nationwide population-based representative data. This is a cross-sectional study that included 9477 participants aged ≥ 40 years from the Korea National Health and Nutrition Examination Survey between 2008 and 2011. The TyG index was calculated as ln[triglyceride (mg/dL) × fasting plasma glucose (mg/dL)/2]. Dual-energy X-ray absorptiometry was used to measure appendicular lean mass (ALM). Low muscle mass was defined an ALM/weight of 2 standard deviations (SD) below of young participants. The overall prevalence of low muscle mass was 4.7%. The prevalence of low muscle mass increased linearly with the quartiles of the TyG index, 2.5%, 4.2%, 5.6%, and 6.7% in Q1–Q4, respectively. The TyG index was negatively associated with ALM/weight both in men (r = − 0.302) and women (r = − 0.230). The odds ratio (OR) for low muscle mass was 2.08 in the highest quartile compared to the lowest quartile. High TyG index was associated with an increased risk of low muscle mass (OR for 1SD increase: 1.13). Increased TyG index was associated with the risk of low muscle mass independent of confounding factors.