bluuebunny/crossref_metadata_2025 huggingface dataset:
In vitro propagation of Althaea rosea - a valuable medicinal plant of Kashmir Himalaya
Authors: Tyub Sumira , Kamili Azra N. , Bhat Mohammad Mansoor
Published: October 2017

Althaea rosea, commonly known as Hollyhock is an ornamental and medicinal plant. A. rosea has been reported to contain highest amount of tannins, carbohydrates, cyanide and mucilage. The purpose of this study was to optimize conditions for multiplication of Althaea rosea using shoottip explants. Varying concentrations solo and in combinations of auxins and cytokinins were experimented. The development of micro-propagation protocol for this valuable medicinal plant can ensure continuous supply of the plant product for pharmaceutical and food industry. In this regard an efficient and reproducible micro-propagation protocol has been developed using Murashige and Skoog’s (MS) (1962) medium augmented with different phytohormonal combinations like BAP, NAA, IBA and IAA. Both direct and indirect multiplication was obtained using in vitro raised shoot tip explants. Maximum shoot number was obtained using combination of BAP and NAA and rooting of isolated shoots was obtained using IBA. 60% of the transplanted plantlets survived under laboratory conditions.
Enhancing Onion Production and Productivity through Introduction of Seed Production Techniques in Central Zone of Tigray Region, Ethiopia
Authors: Kahsay Yemane
Published: October 2017

The main reason of low production and productivity is restricted use of inputs, notably improved seeds and fertilizers. May vegetable seeds are imported which results in different problems like disease outbreak, timely unavailability, costly and so on. The demand of vegetable seed is increasing from time to time. Though vegetable seed production is difficult, there are attempts and efforts to produce at local level. Strengthening of community based seed multiplication is a means to develop the vegetable seed production techniques and business. In order to bring this to practical, demonstration and scaling up activities conducted since 2009 to 2014. Farmers Research Group (FRG) approach was used to implement the research. In 2013 an average yield of 7q/ha of onion seed was recorded while the maximum was 10 q/ha. While in 2014 a maximum yield 16 q/ha was recorded at farmers field. The yield increment might be due to skill development by the farmers. Farmers could get gross income of 24, 000 thousand from a parcel of 300 m2 land. Thus local seed production practice is technically possible and economically feasible and should be encouraged and promoted by all stakeholders so as to enhance the income and livelihood of farmers.
John Caius's contributions to Conrad Gessner'sHistoria animaliumand “Historia plantarum”: a survey with commentaries
Authors: Funk H.
Published: October 2017

The Swiss physician and naturalist Conrad Gessner (1516–1565) is known as the author of Historia animalium, a multi-volume encyclopaedia published between 1551 and 1558 and intended as an up-to-date version of the Aristotelian work of the same title. It included little-known animals from the New World and other regions outside Europe. To realize this ambitious project, Gessner was dependent on a great number of supporters and informants. One of them was the English physician John Caius (1510–1573), who shared with Gessner a special interest in the medical works of Galen. This common interest resulted in a meeting between the two scholars, leading to cooperation and a life-long friendship. The fact that Caius and Gessner were on good terms and cooperated for Historia animalium, as well as for Gessner's unfinished “Historia plantarum”, has often been noted, usually however in a rather cursory manner. This article provides an analysis of how and when Caius's information found its way into Gessner's works.
Mapping Higher-Order Network Flows in Memory and Multilayer Networks with Infomap
Authors: Edler Daniel , Bohlin Ludvig , Rosvall Martin
Published: October 2017

Comprehending complex systems by simplifying and highlighting important dynamical patterns requires modeling and mapping higher-order network flows. However, complex systems come in many forms and demand a range of representations, including memory and multilayer networks, which in turn call for versatile community-detection algorithms to reveal important modular regularities in the flows. Here we show that various forms of higher-order network flows can be represented in a unified way with networks that distinguish physical nodes for representing a complex system’s objects from state nodes for describing flows between the objects. Moreover, these so-called sparse memory networks allow the information-theoretic community detection method known as the map equation to identify overlapping and nested flow modules in data from a range of different higher-order interactions such as multistep, multi-source, and temporal data. We derive the map equation applied to sparse memory networks and describe its search algorithm Infomap, which can exploit the flexibility of sparse memory networks. Together they provide a general solution to reveal overlapping modular patterns in higher-order flows through complex systems.
Energy Performance and CO2 Emissions of HVAC Systems in Commercial Buildings
Authors: Al-Waked Rafat , Nasif Mohammad , Groenhout Nathan , Partridge Lester
Published: October 2017

Energy performance of buildings has attracted much attention among building physicists and engineers worldwide. The effects of building heating; ventilation; and air conditioning (HVAC) systems’ design upgrade on the building energy performance are the focus of the current study. The adopted HVAC system consisted of chilled ceiling and chilled beam systems served by a centrifugal water chiller. An energy simulation study was undertaken in accordance with the national Australian built environment rating system-rules for collecting and using data. A three-dimensional simulation study was carried out utilizing the virtual environment-integrated environmental solutions software. Results from the current study have shown the importance of utilizing energy-efficient HVAC systems and HVAC strategies for achieving a high building energy star rating. Recommended strategies in order to achieve the nominated star rating; as predicted by the simulation analysis; were presented. Moreover; the effects of solar radiation inside the building atrium were significant; which cannot be overcome by simply installing a low shading coefficient glazing type at the atrium skylight. In addition to providing chilled ceiling technology; a high efficiency chiller and low energy lighting; it is recommended that the building be well tuned during the commissioning period. The current approach could be extended to accommodate higher energy ratings of commercial buildings at different locations worldwide.
The Epithelial-to-Mesenchymal Transition in Breast Cancer: Focus on Basal-Like Carcinomas
Authors: Fedele Monica , Cerchia Laura , Chiappetta Gennaro
Published: October 2017

Breast cancer is a heterogeneous disease that is characterized by a high grade of cell plasticity arising from the contribution of a diverse range of factors. When combined, these factors allow a cancer cell to transition from an epithelial to a mesenchymal state through a process of dedifferentiation that confers stem-like features, including chemoresistance, as well as the capacity to migrate and invade. Understanding the complex events that lead to the acquisition of a mesenchymal phenotype will therefore help to design new therapies against metastatic breast cancer. Here, we recapitulate the main endogenous molecular signals involved in this process, and their cross-talk with paracrine factors. These signals and cross-talk include the extracellular matrix; the secretome of cancer-associated fibroblasts, macrophages, cancer stem cells, and cancer cells; and exosomes with their cargo of miRNAs. Finally, we highlight some of the more promising therapeutic perspectives based on counteracting the epithelial-to-mesenchymal transition in breast cancer cells.
On the Limiting Behaviour of the Fundamental Geodesics of Information Geometry
Authors: Critchley Frank , Marriott Paul
Published: October 2017

The Information Geometry of extended exponential families has received much recent attention in a variety of important applications, notably categorical data analysis, graphical modelling and, more specifically, log-linear modelling. The essential geometry here comes from the closure of an exponential family in a high-dimensional simplex. In parallel, there has been a great deal of interest in the purely Fisher Riemannian structure of (extended) exponential families, most especially in the Markov chain Monte Carlo literature. These parallel developments raise challenges, addressed here, at a variety of levels: both theoretical and practical—relatedly, conceptual and methodological. Centrally to this endeavour, this paper makes explicit the underlying geometry of these two areas via an analysis of the limiting behaviour of the fundamental geodesics of Information Geometry, these being Amari’s (+1) and (0)-geodesics, respectively. Overall, a substantially more complete account of the Information Geometry of extended exponential families is provided than has hitherto been the case. We illustrate the importance and benefits of this novel formulation through applications.
Microstrip Patch Antenna Assisted Compact Dual Band Planar Crossover
Authors: Menon Sreedevi
Published: October 2017

In Microwave Monolithic Integrated Circuits, crossovers maintain signal purity when transmission lines overlap with each other. A simple crossover for dual band applications, particularly suitable for the development of smart antennas, is presented in this paper. Derived from conventional patch antenna, the proposed crossovers are easy to design and fabricate, thus reducing the overall complexity. Design is verified for a dual band crossover at 2.4/5.23 GHz on FR4 (Fiberglass Reinforced) epoxy and tested using Keysight E5080 A Vector Network Analyser. The results obtained by simulation and measurement are in agreement. The proposed crossovers find application in a Butler matrix for phased array and smart antenna systems.
Integral Plus Resonant Sliding Mode Direct Power Control for VSC-HVDC Systems under Unbalanced Grid Voltage Conditions
Authors: Yang Weipeng , Zhang Aimin , Li Jungang , Li Guoqi , Zhang Hang , Wang Jianhua
Published: October 2017

An integral plus resonant sliding mode direct power control (IRSMC DPC) strategy for voltage source converter high voltage direct current (VSC-HVDC) systems under unbalanced grid voltage conditions is proposed in this paper. Through detailed instantaneous power flow analysis, a generalized power compensation method, by which the ratio between the amplitude of active and reactive power ripples can be controlled continuously, is obtained. This enables the system to provide flexible power control, so that the desired performance of the system on both the ac and dc sides can be attained under different operating conditions. When the grid voltage is unbalanced, one or both of the active and reactive power terms contain ripples, oscillating at twice the grid frequency, to obtain non-distorted ac current. A power controller consisting of the proportional, integral and resonant control laws is designed using the sliding mode control approach, to achieve accurate power control objective. Simulation studies on a two-terminal VSC-HVDC system using MATLAB/SIMULINK (R2013b, Mathworks, Natick, MA, USA) are conducted to verify the effectiveness of the IRSMC DPC strategy. The results show that this strategy ensures satisfactory performance of the system over a wide range of operating conditions.
Environmental Influences on Forest Fire Regime in the Greater Hinggan Mountains, Northeast China
Authors: Fan Qian , Wang Cuizhen , Zhang Dongyou , Zang Shuying
Published: October 2017

Fires are the major disturbances in the Greater Hinggan Mountains, the only boreal forest in Northeast China. A comprehensive understanding of the fire regimes and influencing environmental parameters driving them from small to large fires is critical for effective forest fire prevention and management. Assisted with satellite imagery, topographic data, and climatic records in this region, this study examines its fire regimes in terms of ignition causes, frequencies, seasonality, and burned sizes in the period of 1980–2005. We found an upward trend for fire occurrences and burned areas and an elongated fire season over the three decades. The dates of the first fire in a year did not vary largely but those of the last fire were significantly delayed. Topographically, spring fires were prevalent throughout the entire region, while summer fires mainly occurred at higher elevations under severe drought conditions. Fall fires were mostly human-caused in areas at lower elevations with gentle terrains. An ordinal logistic regression revealed temperature and elevation were both significant factors to the fire size severity in spring and summer. Other than that, environmental impacts were different. Precipitation in the preceding year greatly influenced spring fires, while summer fires were significantly affected by wind speed, fuel moisture, and human accessibility. An important message from this study is that distinct seasonal variability and a significantly increasing number of summer and fall fires since the mid-1990s suggest a changing fire regime of the boreal forests in the study area. The observed and modeled results could provide insights on establishing a sustainable, localized forest fire prevention strategy in a seasonal manner.
Biological Demalication and Deacetification of Musts and Wines: Can Wine Yeasts Make the Wine Taste Better?
Authors: Vilela Alice
Published: October 2017

Grape musts sometimes reveal excess acidity. An excessive amount of organic acids negatively affect wine yeasts and yeast fermentation, and the obtained wines are characterized by an inappropriate balance between sweetness, acidity or sourness, and flavor/aroma components. An appropriate acidity, pleasant to the palate is more difficult to achieve in wines that have high acidity due to an excess of malic acid, because the Saccharomyces species in general, cannot effectively degrade malic acid during alcoholic fermentation. One approach to solving this problem is biological deacidification by lactic acid bacteria or non-Saccharomyces yeasts, like Schizosaccharomyces pombe that show the ability to degrade L-malic acid. Excessive volatile acidity in wine is also a problem in the wine industry. The use of free or immobilized Saccharomyces cells has been studied to solve both these problems since these yeasts are wine yeasts that show a good balance between taste/flavor and aromatic compounds during alcoholic fermentation. The aim of this review is to give some insights into the use of Saccharomyces cerevisiae strains to perform biological demalication (malic acid degradation) and deacetification (reduction of volatile acidity) of wine in an attempt to better understand their biochemistry and enological features.
Comparison and Downscale of AMSR2 Soil Moisture Products with In Situ Measurements from the SCAN–NRCS Network over Puerto Rico
Authors: Nuñez-Olivieri Jonathan , Muñoz-Barreto Jonathan , Tirado-Corbalá Rebecca , Lakhankar Tarendra , Fisher Andmorgan
Published: October 2017

A continuous spatio-temporal database of accurate soil moisture (SM) measurements is an important asset for agricultural activities, hydrologic studies, and environmental monitoring. The Advanced Microwave Scanning Radiometer 2 (AMSR2), which was launched in May 2012, has been providing SM data globally with a revisit period of two days. It is imperative to assess the quality of this data before performing any application. Since resources of accurate SM measurements are very limited in Puerto Rico, this research will assess the quality of the AMSR2 data by comparing it with ground-based measurements, as well as perform a downscaling technique to provide a better description of how the sensor perceives the surface soil moisture as it passes over the island. The comparison consisted of the evaluation of the mean error, root mean squared error, and the correlation coefficient. Two downscaling techniques were used, and their performances were studied. The results revealed that AMSR2 products tend to underestimate soil moisture. This is due to the extreme heterogeneous distributions of elevations, vegetation densities, soil types, and weather events on the island. This research provides a comprehensive study on the accuracy and potential of the AMSR2 products over Puerto Rico. Further studies are recommended to improve the AMSR2 products.
Higher Mortality in Trauma Patients Is Associated with Stress-Induced Hyperglycemia, but Not Diabetic Hyperglycemia: A Cross-Sectional Analysis Based on a Propensity-Score Matching Approach
Authors: Rau Cheng-Shyuan , Wu Shao-Chun , Chen Yi-Chun , Chien Peng-Chen , Hsieh Hsiao-Yun , Kuo Pao-Jen , Hsieh Ching-Hua
Published: October 2017

Background: Stress-induced hyperglycemia (SIH) is a form of hyperglycemia secondary to stress and commonly occurs in patients with trauma. Trauma patients with SIH have been reported to have an increased risk of mortality. However, information regarding whether these trauma patients with SIH represent a distinct group with differential outcomes when compared to those with diabetic hyperglycemia (DH) remains limited. Methods: Diabetes mellitus (DM) was determined by patient history and/or admission glycated hemoglobin (HbA1c) ≥6.5%. Non-diabetic normoglycemia (NDN) was determined by a serum glucose level <200 mg/dL in the patients without DM. Diabetic normoglycemia (DN) was determined by a serum glucose level <200 mg/dL in the patients with DM. DH and SIH was diagnosed by a serum glucose level ≥200 mg/dL in the patients with and without DM, respectively. Detailed data of these four groups of hospitalized patients, which included NDN (n = 7806), DN (n = 950), SIH (n = 493), and DH (n = 897), were retrieved from the Trauma Registry System at a level I trauma center between 1 January 2009 and 31 December 2015. Patients with incomplete registered data were excluded. Categorical data were compared with Pearson chi-square tests or two-sided Fisher exact tests. The unpaired Student’s t-test and the Mann–Whitney U-test were used to analyze normally distributed continuous data and non-normally distributed data, respectively. Propensity-score-matched cohorts in a 1:1 ratio were allocated using NCSS software with logistic regression to evaluate the effect of SIH and DH on the outcomes of patients. Results: The SIH (median [interquartile range: Q1–Q3], 13 [9–24]) demonstrated a significantly higher Injury Severity Score (ISS) than NDN (9 [4–10]), DN (9 [4–9]), and DH (9 [5–13]). SIH and DH had a 12.3-fold (95% confidence interval [CI] 9.31–16.14; p < 0.001) and 2.4-fold (95% CI 1.71–3.45; p < 0.001) higher odds of mortality, respectively, when compared to NDN. However, in the selected propensity-score-matched patient population, SIH had a 3.0-fold higher odd ratio of mortality (95% CI 1.96–4.49; p < 0.001) than NDN, but DH did not have a significantly higher mortality (odds ratio 1.2, 95% CI 0.99–1.38; p = 0.065). In addition, SIH had 2.4-fold higher odds of mortality (95% CI 1.46–4.04; p = 0.001) than DH. These results suggest that the characteristics and injury severity of the trauma patients contributed to the higher mortality of these patients with hyperglycemia upon admission, and that the pathophysiological effect of SIH was different from that of DH. Conclusions: Although there were worse mortality outcomes among trauma patients presenting with hyperglycemia, this effect was only seen in patients with SIH, but not DH when controlling for age, sex, pre-existed co-morbidities, and ISS.
Joint Toxicity of Different Heavy Metal Mixtures after a Short-Term Oral Repeated-Administration in Rats
Authors: Su Hong , Li Zhou , Fiati Kenston Samuel , Shi Hongbo , Wang Yafei , Song Xin , Gu Yuanliang , Barber Tabatha , Aldinger Joni , Zou Baobo , Ding Min , Zhao Jinshun , Lin Xialu
Published: October 2017

The systemic toxicity of different combinations of heavy metal mixtures (HMMs) was studied according to equivalent proportions of the eight most common detectable heavy metals found in fish consumption in the Ningbo area of China. The ion mass proportions of Zn, Cu, Mn, Cr, Ni, Cd, Pb, and Hg were 1070.0, 312.6, 173.1, 82.6, 30.0, 13.3, 6.6, and 1.0, respectively. In this study, 10 experimental groups were set as follows: M8 (Pb + Cd + Hg + Ni + Cu + Zn + Mn + Cr); M5 (Pb + Cd + Hg + Ni + Cr); M4A (Pb + Cd + Hg + Ni); M4B (Cu + Zn + Mn + Cr); M3 (Cu + Zn + Mn); Cr; Cu; Zn; Mn; and control. Sprague Dawley (SD) rats were orally treated with a single dose of each group every three days (10 times in total) for 34 days. After Morris water maze test, blood and tissue samples were collected to obtain biochemical, histopathological and western blot analysis. Results show abnormalities could be observed in different treatment groups, the M4B combination had the most significant change compared to all other groups. In conclusion, combination HMMs may have adverse effects on the hematologic, hepatic, renal and neurobehavioral function, and may also disturb electrolyte and lipid balance. Why M4B combination generated much higher toxic effects than any other combination mixtures or individual heavy metal needs to be further evaluated.
Multi-Elements in Source Water (Drinking and Surface Water) within Five Cities from the Semi-Arid and Arid Region, NW China: Occurrence, Spatial Distribution and Risk Assessment
Authors: Wu Ting , Li Xiaoping , Yang Tao , Sun Xuemeng , Mielke Howard , Cai Yue , Ai Yuwei , Zhao Yanan , Liu Dongying , Zhang Xu , Li Xiaoyun , Wang Lijun , Yu Hongtao
Published: October 2017

The purpose of this study was to identify the concentration of multi-elements (MEs) in source water (surface and drinking water) and assess their quality for sustainability. A total of 161 water samples including 88 tap drinking waters (DW) and 73 surface waters (SW) were collected from five cities in Xi’an, Yan’an, Xining, Lanzhou, and Urumqi in northwestern China. Eighteen parameters including pH, electrical conductivity (EC), total organic carbon (TOC) total nitrogen (TN), chemical compositions of anions (F−, Cl−, NO3−,HCO3−, SO42−), cations (NH4+, K+, Na+, Ca2+,Mg2+), and metals (lead (Pb), chromium (Cr), cadmium (Cd), copper (Cu)) were analyzed in the first time at the five cities . The results showed that pH values and concentrations of Cl−, SO42−, Na+, K+, Ca2+, Mg2+ and Cd, Cr, Cu in DW were within the permissible limits of the Chinese Drinking Water Quality Criteria, whereas the concentrations of other ions (F−, NO3−, NH4+ and Pb) exceeded their permissible values. In terms of the SW, the concentrations of F−, Cl−, NO3−, SO42− were over the third range threshold i.e., water suitable for fishing and swimming of the Surface Water Quality Standards in China. The spatial distributions of most MEs in source water are similar, and there was no clear variation for all ions and metals. The metals in DW may be caused by water pipes, faucets and their fittings. The noncarcinogenic risk of metals in DW for local children are in decreasing order Cr > Cd > Pb > Cu. The carcinogenic risk from Cr exposure was at the acceptable level according to threshold of USEPA. Although the comprehensive index of potential ecological assessment of Cr, Cd, Pb and Cu in SW ranked at low risk level and was in the order of Huang River in Xining > Peaceful Canal in Urumqi > Yan River in Yan’an > Yellow River in Lanzhou, their adverse effects to ecology and human health at a low concentration in local semi-arid and arid areas should not be ignored in the long run.
Cross-Linked Amylose Bio-Plastic: A Transgenic-Based Compostable Plastic Alternative
Authors: Sagnelli Domenico , Hooshmand Kourosh , Kemmer Gerdi , Kirkensgaard Jacob , Mortensen Kell , Giosafatto Concetta , Holse Mette , Hebelstrup Kim , Bao Jinsong , Stelte Wolfgang , Bjerre Anne-Belinda , Blennow Andreas
Published: October 2017

Bio-plastics and bio-materials are composed of natural or biomass derived polymers, offering solutions to solve immediate environmental issues. Polysaccharide-based bio-plastics represent important alternatives to conventional plastic because of their intrinsic biodegradable nature. Amylose-only (AO), an engineered barley starch with 99% amylose, was tested to produce cross-linked all-natural bioplastic using normal barley starch as a control. Glycerol was used as plasticizer and citrate cross-linking was used to improve the mechanical properties of cross-linked AO starch extrudates. Extrusion converted the control starch from A-type to Vh- and B-type crystals, showing a complete melting of the starch crystals in the raw starch granules. The cross-linked AO and control starch specimens displayed an additional wide-angle diffraction reflection. Phospholipids complexed with Vh-type single helices constituted an integrated part of the AO starch specimens. Gas permeability tests of selected starch-based prototypes demonstrated properties comparable to that of commercial Mater-Bi© plastic. The cross-linked AO prototypes had composting characteristics not different from the control, indicating that the modified starch behaves the same as normal starch. The data shows the feasibility of producing all-natural bioplastic using designer starch as raw material.
The Role and Mechanism of Epithelial-to-Mesenchymal Transition in Prostate Cancer Progression
Authors: Lo U-Ging , Lee Cheng-Fan , Lee Ming-Shyue , Hsieh Jer-Tsong
Published: October 2017

In prostate cancer (PCa), similar to many other cancers, distant organ metastasis symbolizes the beginning of the end disease, which eventually leads to cancer death. Many mechanisms have been identified in this process that can be rationalized into targeted therapy. Among them, epithelial-to-mesenchymal transition (EMT) is originally characterized as a critical step for cell trans-differentiation during embryo development and now recognized in promoting cancer cells invasiveness because of high mobility and migratory abilities of mesenchymal cells once converted from carcinoma cells. Nevertheless, the underlying pathways leading to EMT appear to be very diverse in different cancer types, which certainly represent a challenge for developing effective intervention. In this article, we have carefully reviewed the key factors involved in EMT of PCa with clinical correlation in hope to facilitate the development of new therapeutic strategy that is expected to reduce the disease mortality.
High Endogenous Accumulation of ω-3 Polyunsaturated Fatty Acids Protect against Ischemia-Reperfusion Renal Injury through AMPK-Mediated Autophagy in Fat-1 Mice
Authors: Gwon Do , Hwang Tae , Ro Ju-Ye , Kang Yoon-Joong , Jeong Jin , Kim Do-Kyung , Lim Kyu , Kim Dong , Choi Dae , Kim Jwa-Jin
Published: October 2017

Regulated autophagy is involved in the repair of renal ischemia-reperfusion injury (IRI). Fat-1 transgenic mice produce ω3-Polyunsaturated fatty acids (ω3-PUFAs) from ω6-Polyunsaturated fatty acids (ω6-PUFAs) without a dietary ω3-PUFAs supplement, leading to a high accumulation of omega-3 in various tissues. ω3-PUFAs show protective effects against various renal injuries and it has recently been reported that ω3-PUFAs regulate autophagy. We assessed whether ω3-PUFAs attenuated IR-induced acute kidney injury (AKI) and evaluated its associated mechanisms. C57Bl/6 background fat-1 mice and wild-type mice (wt) were divided into four groups: wt sham (n = 10), fat-1 sham (n = 10), wt IRI (reperfusion 35 min after clamping both the renal artery and vein; n = 15), and fat-1 IRI (n = 15). Kidneys and blood were harvested 24 h after IRI and renal histological and molecular data were collected. The kidneys of fat-1 mice showed better renal cell survival, renal function, and pathological damage than those of wt mice after IRI. In addition, fat-1 mice showed less oxidative stress and autophagy impairment; greater amounts of microtubule-associated protein 1A/1B-light chain 3 (LC3)-II, Beclin-1, and Atg7; lower amounts of p62; and, higher levels of renal cathepsin D and ATP6E than wt kidneys. They also showed more adenosine monophosphate-activated protein kinase (AMPK) activation, which resulted in the inhibition of phosphorylation of the mammalian target of rapamycin (mTOR). Collectively, ω3-PUFAs in fat-1 mice contributed to AMPK mediated autophagy activation, leading to a renoprotective response.
Hydrogen Peroxide Response in Leaves of Poplar (Populus simonii × Populus nigra) Revealed from Physiological and Proteomic Analyses
Authors: Yu Juanjuan , Jin Xin , Sun Xiaomei , Gao Tianxiang , Chen Xiaomei , She Yimin , Jiang Tingbo , Chen Sixue , Dai Shaojun
Published: October 2017

Hydrogen peroxide (H2O2) is one of the most abundant reactive oxygen species (ROS), which plays dual roles as a toxic byproduct of cell metabolism and a regulatory signal molecule in plant development and stress response. Populus simonii × Populus nigra is an important cultivated forest species with resistance to cold, drought, insect and disease, and also a key model plant for forest genetic engineering. In this study, H2O2 response in P. simonii × P. nigra leaves was investigated using physiological and proteomics approaches. The seedlings of 50-day-old P. simonii × P. nigra under H2O2 stress exhibited stressful phenotypes, such as increase of in vivo H2O2 content, decrease of photosynthetic rate, elevated osmolytes, antioxidant accumulation, as well as increased activities of several ROS scavenging enzymes. Besides, 81 H2O2-responsive proteins were identified in the poplar leaves. The diverse abundant patterns of these proteins highlight the H2O2-responsive pathways in leaves, including 14-3-3 protein and nucleoside diphosphate kinase (NDPK)-mediated signaling, modulation of thylakoid membrane structure, enhancement of various ROS scavenging pathways, decrease of photosynthesis, dynamics of proteins conformation, and changes in carbohydrate and other metabolisms. This study provides valuable information for understanding H2O2-responsive mechanisms in leaves of P. simonii × P. nigra.
A Novel Assay Reveals a Maturation Process during Ascospore Wall Formation
Authors: Zhang Kai , Needleman Leor , Zhou Sai , Neiman Aaron
Published: October 2017

The ascospore wall of the budding yeast Saccharomyces cerevisiae consists of inner layers of similar composition to the vegetative cell wall and outer layers made of spore-specific components that confer increased stress resistance on the spore. The primary constituents of the outer spore wall are chitosan, dityrosine, and a third component termed Chi that has been identified by spectrometry but whose chemical structure is not known. The lipophilic dye monodansylpentane readily stains lipid droplets inside of newly formed ascospores but, over the course of several days, the spores become impermeable to the dye. The generation of this permeability barrier requires the chitosan layer, but not dityrosine layer, of the spore wall. Screening of a set of mutants with different outer spore wall defects reveals that impermeability to the dye requires not just the presence of chitosan, but another factor as well, possibly Chi, and suggests that the OSW2 gene product is required for synthesis of this factor. Testing of mutants that block synthesis of specific aromatic amino acids indicates that de novo synthesis of tyrosine contributes not only to formation of the dityrosine layer but to impermeability of the wall as well, suggesting a second role for aromatic amino acids in spore wall synthesis.
GARCH Modelling of Cryptocurrencies
Authors: Chu Jeffrey , Chan Stephen , Nadarajah Saralees , Osterrieder Joerg
Published: October 2017

With the exception of Bitcoin, there appears to be little or no literature on GARCH modelling of cryptocurrencies. This paper provides the first GARCH modelling of the seven most popular cryptocurrencies. Twelve GARCH models are fitted to each cryptocurrency, and their fits are assessed in terms of five criteria. Conclusions are drawn on the best fitting models, forecasts and acceptability of value at risk estimates.
5,9,11-Trihydroxy-10-(2″-hydroxy-3″-methylbut-3″-en-1-yl)-2,2-dimethyl-3-(2′-methylbut-3′-en-2′-yl)-2H,12H-pyrano[2,3-a]xanthen-12-one from Calophyllum pseudomole
Authors: Tanjung Mulyadi , Saputri Ratih Dewi , Tjahjandarie Tjitjik Srie
Published: October 2017

A new pyranocoumarin, namely 5,9,11-trihydroxy-10-(2″-hydroxy-3″-methylbut- 3″en-1-yl)-2,2-dimethyl-3-(2′-methylbut-3′-en-2′-yl)-2H,12H-pyrano[2,3-a]xanthen-12-one 1, was isolated from the stem barkof Calophyllum pesudomole. The structure of compound 1 was elucidated based on its ultaraviolet (UV); infrared (IR); high resolution electro spray ionization mass spectrometry (HRESIMS); 1D and 2D nuclear magnetic resonance (NMR) spectral data.
Biocompatibility and Biocorrosion of Hydroxyapatite-Coated Magnesium Plate: Animal Experiment
Authors: Lim Ho-Kyung , Byun Soo-Hwan , Woo Jae-Man , Kim Sae-Mi , Lee Sung-Mi , Kim Bong-Ju , Kim Hyoun-Ee , Lee Jung-Woo , Kim Soung-Min , Lee Jong-Ho
Published: October 2017

Magnesium (Mg) has the advantage of being resorbed in vivo, but its resorption rate is difficult to control. With uncontrolled resorption, Magnesium as a bone fixation material has minimal clinical value. During resorption not only is the strength rapidly weakened, but rapid formation of metabolite also occurs. In order to overcome these disadvantages, hydroxyapatite (HA) surface coating of pure magnesium plate was attempted in this study. Magnesium plates were inserted above the frontal bone of Sprague-Dawley rats in both the control group (Bare-Mg group) and the experimental group (HA-Mg group). The presence of inflammation, infection, hydrogen gas formation, wound dehiscence, and/or plate exposure was observed, blood tests were performed, and the resorption rate and tensile strength of the retrieved metal plates were measured. The HA-Mg group showed no gas formation or plate exposure until week 12. However, the Bare-Mg group showed consistent gas formation and plate exposure beginning in week 2. WBC (White Blood Cell), BUN (Blood Urea Nitrogen), Creatinine, and serum magnesium concentration levels were within normal range in both groups. AST (Aspartate Aminotransferase) and ALT (Alanine Aminotransferase) values, however, were above normal range in some animals of both groups. The HA-Mg group showed statistically significant advantage in resistance to degradation compared to the Bare-Mg group in weeks 2, 4, 6, 8, and 12. Degradation of HA-Mg plates proceeded after week 12. Coating magnesium plates with hydroxyapatite may be a viable method to maintain their strength long enough to allow bony healing and to control the resorption rate during the initial period.
Tensile Properties and Fracture Behavior of a Powder-Thixoformed 2024Al/SiCp Composite at Elevated Temperatures
Authors: Li Pubo , Chen Tijun
Published: October 2017

In the present work, the tensile properties and fracture behavior of a 2024Al composite reinforced with 10 vol % SiCp and fabricated via powder thixoforming (PT) were studied at temperatures ranging from 25 °C to 300 °C with a strain rate of 0.05 s−1, as well as the PT 2024 alloy. The results indicated that the tensile strengths of both the PT materials were all decreased with increasing the temperature, but the decrease rate of the composite was smaller than that of the 2024 alloy, and the composite exhibited higher tensile strength than that of the 2024 alloy at all of the employed testing temperatures due to the strengthening role of SiCp. Increasing temperature was beneficial for enhancing the ductility of materials, and the maximum elongation was reached at 250 °C. The elongation decrease over 250 °C was attributed to the cavity formation due to the debonding of the SiCp/Al interface and the fracturing of the matrix between SiCp. The fracture of the composite at room temperature initiated from the fracture of SiCp and the debonding of the SiCp/Al interface, but that at high temperatures was dominated by void nucleation and growth in the matrix besides the interface debonding.
Stress Distribution Profile Imaging With Spectral Fabry-Perot Interferometry in Thin Layer Substrates for Surface Micromachining
Authors: Inzelberg Adam , Linzon Yoav
Published: October 2017

We have used spectral two-layer interferometry (STLI) imaging for estimation of the stress distribution profiles (SDPs) in thin film substrates, enabling fast and reliable all-optical methodology for the evaluation of pre-stress topography profiles in silicon wafers deposited with thin films. Specifically, in polycrystalline silicon (PS) and silicon nitride (SN) thin films, we demonstrate a nondestructive, systematic, and robust capability for consistent stress distribution profile (SDP) evaluation relying on STLI. In particular, for PS and SN devices, the SDP estimation is consistent and is compared with complementary characterization of the films.
Microrobotic Platform for Single Motile Microorganism Investigation
Authors: Ahmad Belal , Maeda Hironobu , Kawahara Tomohiro , Arai Fumihito
Published: October 2017

We propose a microrobotic platform for single motile microorganism observation and investigation. The platform utilizes a high-speed online vision sensor to realize real-time observation of a microorganism under a microscopic environment with a relatively high magnification ratio. A microfluidic chip was used to limit the vertical movement of the microorganism and reduce the tracking system complexity. We introduce a simple image processing method, which utilizes high-speed online vision characteristics and shows robustness against image noise to increase the overall tracking performance with low computational time consumption. The design also considers the future integration of a stimulation system using microtools. Successful long-time tracking of a freely swimming microorganism inside of a microfluidic chip for more than 30 min was achieved notwithstanding the presence of noises in the environment of the cell. The specific design of the platform, particularly the tracking system, is described, and the performance is evaluated and confirmed through basic experiments. The potential of the platform to apply mechanical stimulation to a freely swimming microorganism is demonstrated by using a 50-µm-thick microtool. The proposed platform can be used for long-term observation and to achieve different kinds of stimulations, which can induce new behavior of the cells and lead to unprecedented discoveries in biological fields.
N-Doped Graphene with Low Intrinsic Defect Densities via a Solid Source Doping Technique
Authors: Liu Bo , Yang Chia-Ming , Liu Zhiwei , Lai Chao-Sung
Published: October 2017

N-doped graphene with low intrinsic defect densities was obtained by combining a solid source doping technique and chemical vapor deposition (CVD). The solid source for N-doping was embedded into the copper substrate by NH3 plasma immersion. During the treatment, NH3 plasma radicals not only flattened the Cu substrate such that the root-mean-square roughness value gradually decreased from 51.9 nm to 15.5 nm but also enhanced the nitrogen content in the Cu substrate. The smooth surface of copper enables good control of graphene growth and the decoupling of height fluctuations and ripple effects, which compensate for the Coulomb scattering by nitrogen incorporation. On the other hand, the nitrogen atoms on the pre-treated Cu surface enable nitrogen incorporation with low defect densities, causing less damage to the graphene structure during the process. Most incorporated nitrogen atoms are found in the pyrrolic configuration, with the nitrogen fraction ranging from 1.64% to 3.05%, while the samples exhibit low defect densities, as revealed by Raman spectroscopy. In the top-gated graphene transistor measurement, N-doped graphene exhibits n-type behavior, and the obtained carrier mobilities are greater than 1100 cm2·V−1·s−1. In this study, an efficient and minimally damaging n-doping approach was proposed for graphene nanoelectronic applications.
Silibinin Restores NAD+ Levels and Induces the SIRT1/AMPK Pathway in Non-Alcoholic Fatty Liver
Authors: Salomone Federico , Barbagallo Ignazio , Godos Justyna , Lembo Vincenzo , Currenti Walter , Cinà Diana , Avola Roberto , D’Orazio Nicolantonio , Morisco Filomena , Galvano Fabio , Li Volti Giovanni
Published: October 2017

Nicotinamide adenine dinucleotide (NAD+) homeostasis is emerging as a key player in the pathogenesis of non-alcoholic fatty liver disease (NAFLD) and is tightly linked to the SIRT1/5’-AMP-activated protein kinase (AMPK) pathway. Silibinin, the main component of silymarin, has been proposed as a nutraceutical for the treatment of NAFLD. In this study, we aimed to identify whether silibinin may influence the NAD+/SIRT1 axis. To this end, C57BL/6 mice were fed a high fat diet (HFD) for 16 weeks, and were treated with silibinin or vehicle during the last 8 weeks. HepG2 cells were treated with 0.25 mM palmitate for 24 h with silibinin 25 µM or vehicle. HFD and palmitate administration led to oxidative stress, poly-(ADP-ribose)-polymerase (PARP) activation, NAD+ consumption, and lower SIRT1 activity. In mice fed the HFD, and in HepG2 treated with palmitate, we consistently observed lower levels of phospho-AMPKThr172 and phospho-acetyl-CoA carboxylaseSer79 and higher levels of nuclear sterol regulatory element-binding protein 1 activity, indicating de novo lipogenesis. Treatment of mice and HepG2 with silibinin abolished oxidative stress, and inhibited PARP activation thus restoring the NAD+ pool. In agreement with preserved NAD+ levels, SIRT1 activity and AMPK phosphorylation returned to control levels in mice and HepG2. Our results further indicate silibinin as a promising molecule for the treatment of NAFLD.
Nutritional and Health-Related Effects of a Diet Containing Apple Seed Meal in Rats: The Case of Amygdalin
Authors: Opyd Paulina , Jurgoński Adam , Juśkiewicz Jerzy , Milala Joanna , Zduńczyk Zenon , Król Bogusław
Published: October 2017

Apple pomace includes seeds that are rich in protein, fiber, and oil, which can be extracted from them. However, they can also contain a significant amount of toxigenic amygdalin. We hypothesized that amygdalin is a compound that significantly reduces the nutritional and health quality of defatted apple seeds. An experiment was conducted on rats that were distributed into three groups and fed with high-fructose diets. In the control (C) and amygdalin (AMG) groups, cellulose and casein were the source of dietary fiber and protein, respectively; in the apple seed meal (ASM) group, dietary fiber and protein originated from the endosperm of apple seeds, which were previously defatted and ground. A diet fed to the ASM group also contained 0.24% of amygdalin from the meal, whereas the AMG diet was supplemented with the same amount of synthetic amygdalin. After 14 days of experimental feeding, the body weight of rats was decreased in the ASM group. When compared to the C group, apparent protein digestibility and nitrogen retention were increased in the AMG group, while both were decreased in the ASM group. In the small intestine, mucosal maltase activity was decreased in the AMG and ASM groups, whereas lactase activity was only decreased by dietary amygdalin. The caecal SCFA pool and butyrate concentration were significantly increased in the ASM group compared to the other groups. Moreover, the ASM diet increased plasma concentration of high density lipoprotein (HDL) cholesterol and plasma antioxidant capacity of water-soluble substances (ACW). It also decreased the liver content of thiobarbituric acid-reactive substances (TBARS). In contrast, dietary amygdalin did not affect these indices. Dietary supplementation with apple seed meal can exert beneficial effects on the intestinal tract, blood lipid profile and antioxidant status of rats. In most cases, these effects are not limited by the presence of amygdalin. However, the nutritional value of protein from apple seed meal is relatively low.
The Thorvald II Agricultural Robotic System
Authors: Grimstad Lars , From Pål
Published: October 2017

This paper presents a novel and modular approach to agricultural robots. Food production is highly diverse in several aspects. Even farms that grow the same crops may differ in topology, infrastructure, production method, and so on. Modular robots help us adapt to this diversity, as they can quickly be configured for various farm environments. The robots presented in this paper are hardware modular in the sense that they can be reconfigured to obtain the necessary physical properties to operate in different production systems—such as tunnels, greenhouses and open fields—and their mechanical properties can be adapted to adjust for track width, power requirements, ground clearance, load capacity, and so on. The robot’s software is generalizing to work with the great variation of robot designs that can be realized by assembling hardware modules in different configurations. The paper presents several novel ideas for agricultural robotics, as well as extensive field trials of several different versions of the Thorvald II platform.
Improving the Accuracy of Direct Geo-referencing of Smartphone-Based Mobile Mapping Systems Using Relative Orientation and Scene Geometric Constraints
Authors: Alsubaie Naif , Youssef Ahmed , El-Sheimy Naser
Published: October 2017

This paper introduces a new method which facilitate the use of smartphones as a handheld low-cost mobile mapping system (MMS). Smartphones are becoming more sophisticated and smarter and are quickly closing the gap between computers and portable tablet devices. The current generation of smartphones are equipped with low-cost GPS receivers, high-resolution digital cameras, and micro-electro mechanical systems (MEMS)-based navigation sensors (e.g., accelerometers, gyroscopes, magnetic compasses, and barometers). These sensors are in fact the essential components for a MMS. However, smartphone navigation sensors suffer from the poor accuracy of global navigation satellite System (GNSS), accumulated drift, and high signal noise. These issues affect the accuracy of the initial Exterior Orientation Parameters (EOPs) that are inputted into the bundle adjustment algorithm, which then produces inaccurate 3D mapping solutions. This paper proposes new methodologies for increasing the accuracy of direct geo-referencing of smartphones using relative orientation and smartphone motion sensor measurements as well as integrating geometric scene constraints into free network bundle adjustment. The new methodologies incorporate fusing the relative orientations of the captured images and their corresponding motion sensor measurements to improve the initial EOPs. Then, the geometric features (e.g., horizontal and vertical linear lines) visible in each image are extracted and used as constraints in the bundle adjustment procedure which correct the relative position and orientation of the 3D mapping solution.