bluuebunny/crossref_metadata_2025 huggingface dataset:
Corrosion behavior of self-ligating and conventional metal brackets
Authors: Maia Lúcio Henrique Esmeraldo Gurgel , Lopes Filho Hibernon , Ruellas Antônio Carlos de Oliveira , Araújo Mônica Tirre de Souza , Vaitsman Delmo Santiago
Published: July 2014

Objective: To test the null hypothesis that the aging process in self-ligating brackets is not higher than in conventional brackets. Methods: Twenty-five conventional (GN-3M/Unitek; GE-GAC; VE-Aditek) and 25 self-ligating (SCs-3M/Unitek; INs-GAC; ECs-Aditek) metal brackets from three manufacturers (n = 150) were submitted to aging process in 0.9% NaCl solution at a constant temperature of 37 ± 1ºC for 21 days. The content of nickel, chromium and iron ions in the solution collected at intervals of 7, 14 and 21 days was quantified by atomic absorption spectrophotometry. After the aging process, the brackets were analyzed by scanning electron microscopy (SEM) under 22X and 1,000X magnifications. Results: Comparison of metal release in self-ligating and conventional brackets from the same manufacturer proved that the SCs group released more nickel (p < 0.05) than the GN group after 7 and 14 days, but less chromium (p < 0.05) after 14 days and less iron (p < 0.05) at the three experimental time intervals. The INs group released less iron (p < 0.05) than the GE group after 7 days and less nickel, chromium and iron (p < 0.05) after 14 and 21 days. The ECs group released more nickel, chromium and iron (p < 0.05) than the VE group after 14 days, but released less nickel and chromium (p < 0.05) after 7 days and less chromium and iron (p < 0.05) after 21 days. The SEM analysis revealed alterations on surface topography of conventional and self-ligating brackets. Conclusions: The aging process in self-ligating brackets was not greater than in conventional brackets from the same manufacturer. The null hypothesis was accepted.
As epidemias nas notícias em Portugal: cólera, peste, tifo, gripe e varíola, 1854-1918
Authors: Almeida Maria Antónia Pires de
Published: July 2014

Em períodos de crise sanitária grave como os de 1854-1856, 1899 e 1918, especialmente no Porto, onde cólera-morbo, peste bubónica, tifo exantemático, gripe pneumónica e varíola mataram percentagens elevadas da população, as imagens das epidemias na imprensa permitem-nos identificar os conhecimentos científicos num país considerado periférico, mas que dispunha de estudos e pessoal especializado no nível dos mais avançados da época. Uma base de dados de 6.700 notícias, artigos e anúncios revela-nos o conhecimento médico e farmacêutico da segunda metade do século XIX e início do XX, o modo como era transmitido e divulgado ao público e as soluções apresentadas pelas autoridades sanitárias. Um fator foi sempre salientado nas notícias e anúncios: a higiene.
Pulmonary function in advanced uncomplicated singleton and twin pregnancy
Authors: Siddiqui Anwar Hasan , Tauheed Nazia , Ahmad Aquil , Mohsin Zehra
Published: July 2014

Objective: Pregnancy brings about significant changes in respiratory function, as evidenced by alterations in lung volumes and capacities, which are attributable to the mechanical impediment caused by the growing foetus. This study was undertaken in order to identify changes in respiratory function during normal pregnancy and to determine whether such changes are more pronounced in twin pregnancy than in singleton pregnancy. Methods: Respiratory function was assessed in 50 women with twin pregnancies and in 50 women with singleton pregnancies (during the third trimester in both groups), as well as in 50 non-pregnant women. We measured the following pulmonary function test parameters: FVC; FEV1; PEF rate; FEV1/FVC ratio; FEF25-75%; and maximal voluntary ventilation. Results: All respiratory parameters except the FEV1/FVC ratio were found to be lower in the pregnant women than in the non-pregnant women. We found no significant differences between women with twin pregnancies and those with singleton pregnancies, in terms of respiratory function. Conclusions: Despite its higher physiological demands, twin pregnancy does not appear to impair respiratory function to any greater degree than does singleton pregnancy.
Relationships between the history of thermal stress and the relative risk of diseases of Caribbean corals
Authors: Randall C. J. , Jordan-Garza A. G. , Muller E. M. , van Woesik R.
Published: July 2014

The putative increase in coral diseases in the Caribbean has led to extensive declines in coral populations. Coral diseases are a consequence of the complex interactions among the coral hosts, the pathogens, and the environment. Yet, the relative influence that each of these components has on the prevalence of coral diseases is unclear. Also unknown is the extent to which historical thermal‐stress events have influenced the prevalence of contemporary coral diseases and the potential adjustment of coral populations to thermal stress. We used a Bayesian approach to test the hypothesis that in 2012 the relative risk of four signs of coral disease (white signs, dark spots, black bands, and yellow signs) differed at reef locations with different thermal histories. We undertook an extensive spatial study of coral diseases at four locations in the Caribbean region (103 km), two with and two without a history of frequent thermal anomalies (∼4–6 years) over the last 143 years (1870–2012). Locations that historically experienced frequent thermal anomalies had a significantly higher risk of corals displaying white signs, and had a lower risk of corals displaying dark spots, than locations that did not historically experience frequent thermal anomalies. By contrast, there was no relationship between the history of thermal stress and the relative risk of corals displaying black bands and yellow signs, at least at the spatial scale of our observations.
Fishing drives declines in fish parasite diversity and has variable effects on parasite abundance
Authors: Wood Chelsea L. , Sandin Stuart A. , Zgliczynski Brian , Guerra Ana Sofía , Micheli Fiorenza
Published: July 2014

Despite the ubiquity and ecological importance of parasites, relatively few studies have assessed their response to anthropogenic environmental change. Heuristic models have predicted both increases and decreases in parasite abundance in response to human disturbance, with empirical support for both. However, most studies focus on one or a few selected parasite species. Here, we assess the abundance of parasites of seven species of coral reef fishes collected from three fished and three unfished islands of the Line Islands archipelago in the central equatorial Pacific. Because we chose fish hosts that spanned different trophic levels, taxonomic groups, and body sizes, we were able to compare parasite responses across a broad cross section of the total parasite community in the presence and absence of fishing, a major human impact on marine ecosystems. We found that overall parasite species richness was substantially depressed on fished islands, but that the response of parasite abundance varied among parasite taxa: directly transmitted parasites were significantly more abundant on fished than on unfished islands, while the reverse was true for trophically transmitted parasites. This probably arises because trophically transmitted parasites require multiple host species, some of which are the top predators most sensitive to fishing impacts. The increase in directly transmitted parasites appeared to be due to fishing‐driven compensatory increases in the abundance of their hosts. Together, these results provide support for the predictions of both heuristic models, and indicate that the direction of fishing's impact on parasite abundance is mediated by parasite traits, notably parasite transmission strategies.
A decision framework for prioritizing multiple management actions for threatened marine megafauna
Authors: Fuentes M. M. P. B. , Blackwood J. , Jones B. , Kim M. , Leis B. , Limpus C. J. , Marsh H. , Mitchell J. , Pouzols F. M. , Pressey R. L. , Visconti P.
Published: July 2014

Resources for conserving biodiversity are invariably insufficient. This situation creates the need for transparent, systematic frameworks to help stakeholders prioritize the allocation of resources across multiple management actions. We developed a novel framework that explicitly prioritizes actions to minimize the impacts of several threats across a species' range. The framework uses a budget constraint and maximizes conservation outcomes from a set of management actions, accounting for the likelihood of the action being successfully applied and accepted by local and Indigenous communities. This approach is novel in that it integrates local knowledge and expert opinion with optimization software, thereby minimizing assumptions about likelihood of success of actions and their effectiveness. To test the framework, we used the eastern Gulf of Carpentaria and Torres Strait population of the flatback turtle, Natator depressus, as a case study. This approach allowed the framework to be applied in a data‐poor context, a situation common in conservation planning. The framework identified the best set of actions to maximize the conservation of flatback eggs for scenarios with different budgets and management parameters and allowed comparisons between optimized and preselected scenarios. Optimized scenarios considered all implementable actions to explore how to best allocate resources with a specified budget and focus. Preselected scenarios were used to evaluate current allocations of funds and/or potential budget allocations suggested by different stakeholders. Scenarios that used a combination of aerial and ground strategies to reduce predation of eggs performed better than scenarios that focused only on reducing harvest of eggs. The performances of optimized and preselected scenarios were generally similar among scenarios that targeted similar threats. However, the cost‐effectiveness of optimized scenarios was usually higher than that of preselected scenarios, demonstrating the value of conducting a systematic optimization approach. Our method provides a foundation for more effective conservation investments and guidance to prioritize actions within recovery plans while considering the sociopolitical and cultural context of decisions. The framework can be adapted easily to a wide range of species, geographical scales, and life stages.
EltonTraits 1.0: Species‐level foraging attributes of the world's birds and mammals
Authors: Wilman Hamish , Belmaker Jonathan , Simpson Jennifer , de la Rosa Carolina , Rivadeneira Marcelo M. , Jetz Walter
Published: July 2014

Species are characterized by physiological, behavioral, and ecological attributes that are all subject to varying evolutionary and ecological constraints and jointly determine species' role and function in ecosystems. Attributes such as diet, foraging strata, foraging time, and body size, in particular, characterize a large portion of the “Eltonian” niches of species. Here we present a global species‐level compilation of these key attributes for all 9993 and 5400 extant bird and mammal species derived from key literature sources. Global handbooks and monographs allowed the consistent sourcing of attributes for most species. For diet and foraging stratum we followed a defined protocol to translate the verbal descriptions into standardized, semiquantitative information about relative importance of different categories. Together with body size (continuous) and activity time (categorical) this enables a much finer distinction of species' foraging ecology than typical categorical guild assignments allow. Attributes lacking information for specific species are flagged, and interpolated values based on taxonomy are provided instead. The presented data set is limited by, among others, these select cases missing observed data, by errors and uncertainty in the expert assessment as presented in the literature, and by the lack of intraspecific information. However, the standardized and transparent nature and complete global coverage of the data set should support an array of potential studies in biogeography, community ecology, macroevolution, global change biology, and conservation. Potential uses include comparative work involving these traits as focal or secondary variables, ecological research on the trait or trophic structure of communities, or conservation science concerned with the loss of function among species or in ecosystems in a changing world. We hope that this publication will spur the sharing, collaborative curation, and extension of data to the benefit of a more integrative, rigorous, and global biodiversity science.
Ephemeral disturbances have long‐lasting impacts on forest invasion dynamics
Authors: Eschtruth Anne K. , Battles John J.
Published: July 2014

Ephemeral disturbances are common in many systems. Often, these brief events are assumed to be a nuisance with little long‐term ecological impact. We quantified the impact of the ephemeral forest disturbance caused by gypsy moth canopy defoliation on exotic plant invasion in eight hardwood forests in the Delaware Water Gap National Recreation Area, USA. Six years following the gypsy moth disturbance, we were able to predict 59% of the increase inAlliaria petiolataabundance and 42% of the increase inMicrostegium vimineumabundance with models incorporating an interaction between disturbance severity and propagule pressure. In addition, we found that the disturbance timing had substantial impacts on the invasion dynamics ofAlliaria petiolata. Our results suggest that ephemeral disturbances can have important and long‐lasting impacts on plant communities, and highlight the need to account for variations in disturbance characteristics and the role of propagule pressure in determining the disturbance–invasion relationship.
Biomass and its allocation of Chinese forest ecosystems
Authors: Luo Yunjian , Zhang Xiaoquan , Wang Xiaoke , Lu Fei
Published: July 2014

Forest biomass and its allocation have long been considered important in forest ecosystem structure and function. However, discrete forest biomass data and its allocation to various forest components must be standardized to explore many ecological questions, e.g., plant allometric scaling laws, biomass allocation theory, and terrestrial carbon cycling. Currently, available data sets focus either on regions other than China, or studies in China are spatially and/or temporally limited, e.g., specific habitats and/or time periods. Therefore, the applicability of conclusions to world or China forests might be problematic. Consequently, in the present study, published studies (during the 1978–2008 period) on biomass and its allocations in China's forests (excluding Hong Kong, Macao, and Taiwan) were collected and critically reviewed, and a comprehensive forest biomass data set of China was developed. The data set included the following biomass data: tree overstory components (stems, branches, leaves, and roots, among all other plant material), the understory vegetation (saplings, shrubs, herbs, and mosses), woody liana vegetation, and the necromass components of dead organic matter (litterfall, suspended branches, and dead trees). Moreover, associated information was also included, i.e., geographical location, climate, soil fertility, stand description, sampling regime (the dimension and sample size of plots), and biomass measurement methods. The data set included 1607 entries for 348 study sites, which exhibited a broad spatial distribution, and covered broad climatic gradients (−5.1°C to 23.8°C in mean annual temperature and 223–2515 mm in mean annual precipitation). Our data set can be used to verify the accuracy of models used to budget China's forest carbon dynamics, and also provides an opportunity to further elucidate and confirm general principles and patterns in ecology. Finally, the data set is freely available for noncommercial scientific applications.
Soil Properties, Nitrogen Status, and Switchgrass Productivity in a Biochar‐Amended Silty Clay Loam
Authors: Krapfl Kurt J. , Hatten Jeff A. , Roberts Scott D. , Baldwin Brian S. , Rousseau Randall J. , Shankle Mark W.
Published: July 2014

A 14‐wk greenhouse study was conducted to assess how varying application rates of biomass‐derived black carbon (biochar) and N fertilizer affect soil properties, plant N status, and switchgrass (Panicum virgatumL.) productivity. Biochar derived from a southern pine species was mixed with a silty clay loam at rates of 0, 0.4, 1.9, and 3.9% (w/w) and two rates of N fertilizer (0 and 56 kg ha−1of N as urea) were applied in a randomized complete block design. Biochar provided increases in the volumetric water content (VWC, %) of the soil during the study period. At study completion, soil pH and total C were increased. Foliar N concentration and content did not differ among treatments despite significant increases in soil C/N ratios due to biochar. Switchgrass yields were reduced at the highest biochar application rate but were unaffected when rates were moderate. Nitrogen fertilization had few effects on measured soil and plant properties, and no interactive effects were found when applied in conjunction with biochar. Overall, moderate rates of biochar application increased soil pH, soil C content, and VWC but had negligible effects on plant N status or switchgrass yields. Our results demonstrate a potential function of biochar for improving temperate soil properties.
Genotypes and Antibiotic Resistances of Campylobacter jejuni Isolates from Cattle and Pigeons in Dairy Farms
Authors: Bianchini Valentina , Luini Mario , Borella Laura , Parisi Antonio , Jonas Romie , Kittl Sonja , Kuhnert Peter
Published: July 2014

Campylobacter jejuni is the most common food-borne zoonotic pathogen causing human gastroenteritis worldwide and has assumed more importance in Italy following the increased consumption of raw milk. Our objectives were to get an overview of genotypes and antibiotic resistances in C. jejuni isolated from milk, cattle feces, and pigeons in dairy herds of Northern Italy. flaB-typing was applied to 78 C. jejuni isolates, previously characterized by Multi-Locus Sequence Typing, and genotypic resistances towards macrolides and quinolones based on point mutations in the 23S rRNA and gyrA genes, respectively, were determined. flaB-typing revealed 22 different types with one of them being novel and was useful to further differentiate strains with an identical Sequence Type (ST) and to identify a pigeon-specific clone. Macrolide resistance was not found, while quinolone resistance was detected in 23.3% of isolates. A relationship between specific genotypes and antibiotic resistance was observed, but was only significant for the Clonal Complex 206. Our data confirm that pigeons do not play a role in the spread of C. jejuni among cattle and they are not responsible for milk contamination. A relevant number of bulk milk samples were contaminated by C. jejuni resistant to quinolones, representing a possible source of human resistant strains.
Parent-Child Associations in Pedometer-Determined Physical Activity and Sedentary Behaviour on Weekdays and Weekends in Random Samples of Families in the Czech Republic
Authors: Sigmundová Dagmar , Sigmund Erik , Vokáčová Jana , Kopčáková Jaroslava
Published: July 2014

This study investigates whether more physically active parents bring up more physically active children and whether parents’ level of physical activity helps children achieve step count recommendations on weekdays and weekends. The participants (388 parents aged 35–45 and their 485 children aged 9–12) were randomly recruited from 21 Czech government-funded primary schools. The participants recorded pedometer step counts for seven days (≥10 h a day) during April–May and September–October of 2013. Logistic regression (Enter method) was used to examine the achievement of the international recommendations of 11,000 steps/day for girls and 13,000 steps/day for boys. The children of fathers and mothers who met the weekend recommendation of 10,000 steps were 5.48 (95% confidence interval: 1.65; 18.19; p < 0.01) and 3.60 times, respectively (95% confidence interval: 1.21; 10.74; p < 0.05) more likely to achieve the international weekend recommendation than the children of less active parents. The children of mothers who reached the weekday pedometer-based step count recommendation were 4.94 times (95% confidence interval: 1.45; 16.82; p < 0.05) more likely to fulfil the step count recommendation on weekdays than the children of less active mothers.
Inactivation of Selected Bacterial Pathogens in Dairy Cattle Manure by Mesophilic Anaerobic Digestion (Balloon Type Digester)
Authors: Manyi-Loh Christy , Mamphweli Sampson , Meyer Edson , Okoh Anthony , Makaka Golden , Simon Michael
Published: July 2014

Anaerobic digestion of animal manure in biogas digesters has shown promise as a technology in reducing the microbial load to safe and recommended levels. We sought to treat dairy manure obtained from the Fort Hare Dairy Farm by investigating the survival rates of bacterial pathogens, through a total viable plate count method, before, during and after mesophilic anaerobic digestion. Different microbiological media were inoculated with different serial dilutions of manure samples that were withdrawn from the biogas digester at 3, 7 and 14 day intervals to determine the viable cells. Data obtained indicated that the pathogens of public health importance were 90%–99% reduced in the order: Campylobacter sp. (18 days) < Escherichia coli sp. (62 days) < Salmonella sp. (133 days) from a viable count of 10.1 × 103, 3.6 × 105, 7.4 × 103 to concentrations below the detection limit (DL = 102 cfu/g manure), respectively. This disparity in survival rates may be influenced by the inherent characteristics of these bacteria, available nutrients as well as the stages of the anaerobic digestion process. In addition, the highest p-value i.e., 0.957 for E. coli showed the statistical significance of its model and the strongest correlation between its reductions with days of digestion. In conclusion, the results demonstrated that the specific bacterial pathogens in manure can be considerably reduced through anaerobic digestion after 133 days.
Dasymetric Mapping and Spatial Modeling of Mosquito Vector Exposure, Chesapeake, Virginia, USA
Authors: Cleckner Haley , Allen Thomas
Published: July 2014

Complex biophysical, social, and human behavioral factors influence population vulnerability to vector-borne diseases. Spatially and temporally dynamic environmental and anthropogenic patterns require sophisticated mapping and modeling techniques. While many studies use environmental variables to predict risk, human population vulnerability has been a challenge to incorporate into spatial risk models. This study demonstrates and applies dasymetric mapping techniques to map spatial patterns of vulnerable human populations and characterize potential exposure to mosquito vectors of West Nile Virus across Chesapeake, Virginia. Mosquito vector abundance is quantified and combined with a population vulnerability index to evaluate exposure of human populations to mosquitoes. Spatial modeling is shown to capture the intersection of environmental factors that produce spatial hotspots in mosquito vector abundance, which in turn poses differential risks over time to humans. Such approaches can help design overall mosquito pest management and identify high-risk areas in advance of extreme weather.
Induction of Apurinic Endonuclease 1 Overexpression by Endoplasmic Reticulum Stress in Hepatoma Cells
Authors: Cheng Tsung-Lin , Chen Pin-Shern , Li Ren-Hao , Yuan Shyng-Shiou , Su Ih-Jen , Hung Jui-Hsiang
Published: July 2014

Hepatocellular carcinoma (HCC) is one of the most common malignancies worldwide with poor prognosis due to resistance to conventional chemotherapy and limited efficacy of radiotherapy. Previous studies have noted the induction of endoplasmic reticulum stress or apurinic endonuclease 1 (APE1) expression in many tumors. Therefore, the aim of this study was to investigate the relationship between endoplasmic reticulum (ER stress) and APE1 in hepatocellular carcinoma. Here we investigate the expression of APE1 during ER stress in HepG2 and Huh-7 cell lines. Tunicamycin or brefeldin A, two ER stress inducers, increased APE1 and GRP78, an ER stress marker, expression in HepG2 and Huh-7 cells. Induction of APE1 expression was observed through transcription level in response to ER stress. APE1 nuclear localization during ER stress was determined using immunofluorescence assays in HepG2 cells. Furthermore, expression of Hepatitis B virus pre-S2∆ large mutant surface protein (pre-S2∆), an ER stress-induced protein, also increased GRP78 and APE1 expression in the normal hepatocyte NeHepLxHT cell line. Similarly, tumor samples showed higher expression of APE1 in ER stress-correlated liver cancer tissue in vivo. Our results demonstrate that ER stress and HBV pre-S2∆ increased APE1 expression, which may play an important role in resistance to chemotherapeutic agents or tumor development. Therefore, these data provide an important chemotherapeutic strategy in ER stress and HBV pre-S2∆-associated tumors.
Copy Number Analysis of 24 Oncogenes: MDM4 Identified as a Putative Marker for Low Recurrence Risk in Non Muscle Invasive Bladder Cancer
Authors: Salvi Samanta , Calistri Daniele , Gurioli Giorgia , Carretta Elisa , Serra Luigi , Gunelli Roberta , Zoli Wainer , Casadio Valentina
Published: July 2014

Patients with non-muscle invasive bladder cancer (NMIBC) generally have a high risk of relapsing locally after primary tumor resection. The search for new predictive markers of local recurrence thus represents an important goal for the management of this disease. We studied the copy number variations (CNVs) of 24 oncogenes (MDM4, MYCN, ALK, PDGFRA, KIT, KDR, DHFR, EGFR, MET, SMO, FGFR1, MYC, ABL1, RET, CCND1, CCND2, CDK4, MDM2, AURKB, ERBB2, TOP2A, AURKA, AR and BRAF) using multiplex ligation probe amplification technique to verify their role as predictive markers of recurrence. Formalin-fixed paraffin-embedded tissue samples from 43 patients who underwent transurethral resection of the bladder (TURB) were used; 23 patients had relapsed and 20 were disease-free after 5 years. Amplification frequencies were analyzed for all genes and MDM4 was the only gene that showed significantly higher amplification in non recurrent patients than in recurrent ones (0.65 vs. 0.3; Fisher’s test p = 0.023). Recurrence-free survival analysis confirmed the predictive role of MDM4 (log-rank test p = 0.041). Our preliminary results indicate a putative role for the MDM4 gene in predicting local recurrence of bladder cancer. Confirmation of this hypothesis is needed in a larger cohort of NMIBC patients.
Design, Synthesis and Biological Evaluation of C(6)-Modified Celastrol Derivatives as Potential Antitumor Agents
Authors: Tang Kaiyong , Huang Qingqing , Zeng Jafeng , Wu Guangming , Huang Jinwen , Pan Junfang , Lu Wei
Published: July 2014

New six C6-celastrol derivatives were designed, synthesized, and evaluated for their in vitro cytotoxic activities against nine human cancer cell lines (BGC-823, H4, Bel7402, H522, Colo 205, HepG2 and MDA-MB-468). The results showed that most of the compounds displayed potent inhibition against BGC823, H4, and Bel7402, with IC50s of 1.84–0.39 μM. The best compound NST001A was tested in an in vivo antitumor assay on nude mice bearing Colo 205 xenografts, and showed significant inhibition of tumor growth at low concentrations. Therefore, celastrol C-6 derivatives are potential drug candidates for treating cancer.
Improving Co-Amorphous Drug Formulations by the Addition of the Highly Water Soluble Amino Acid, Proline
Authors: Jensen Katrine , Löbmann Korbinian , Rades Thomas , Grohganz Holger
Published: July 2014

Co-amorphous drug amino acid mixtures were previously shown to be a promising approach to create physically stable amorphous systems with the improved dissolution properties of poorly water-soluble drugs. The aim of this work was to expand the co-amorphous drug amino acid mixture approach by combining the model drug, naproxen (NAP), with an amino acid to physically stabilize the co-amorphous system (tryptophan, TRP, or arginine, ARG) and a second highly soluble amino acid (proline, PRO) for an additional improvement of the dissolution rate. Co-amorphous drug-amino acid blends were prepared by ball milling and investigated for solid state characteristics, stability and the dissolution rate enhancement of NAP. All co-amorphous mixtures were stable at room temperature and 40 °C for a minimum of 84 days. PRO acted as a stabilizer for the co-amorphous system, including NAP–TRP, through enhancing the molecular interactions in the form of hydrogen bonds between all three components in the mixture. A salt formation between the acidic drug, NAP, and the basic amino acid, ARG, was found in co-amorphous NAP–ARG. In comparison to crystalline NAP, binary NAP–TRP and NAP–ARG, it could be shown that the highly soluble amino acid, PRO, improved the dissolution rate of NAP from the ternary co-amorphous systems in combination with either TRP or ARG. In conclusion, both the solubility of the amino acid and potential interactions between the molecules are critical parameters to consider in the development of co-amorphous formulations.
Correlation Networks for Identifying Changes in Brain Connectivity during Epileptiform Discharges and Transcranial Magnetic Stimulation
Authors: Siggiridou Elsa , Kugiumtzis Dimitris , Kimiskidis Vasilios
Published: July 2014

The occurrence of epileptiform discharges (ED) in electroencephalographic (EEG) recordings of patients with epilepsy signifies a change in brain dynamics and particularly brain connectivity. Transcranial magnetic stimulation (TMS) has been recently acknowledged as a non-invasive brain stimulation technique that can be used in focal epilepsy for therapeutic purposes. In this case study, it is investigated whether simple time-domain connectivity measures, namely cross-correlation and partial cross-correlation, can detect alterations in the connectivity structure estimated from selected EEG channels before and during ED, as well as how this changes with the application of TMS. The correlation for each channel pair is computed on non-overlapping windows of 1 s duration forming weighted networks. Further, binary networks are derived by thresholding or statistical significance tests (parametric and randomization tests). The information for the binary networks is summarized by statistical network measures, such as the average degree and the average path length. Alterations of brain connectivity before, during and after ED with or without TMS are identified by statistical analysis of the network measures at each state.
The Sustainability of Community-Based Adaptation Projects in the Blue Nile Highlands of Ethiopia
Authors: Simane Belay , Zaitchik Benjamin
Published: July 2014

Climate resilience in subsistence agricultural communities depends strongly on the robustness and effective management of the agricultural natural resource base. For this reason, adaptation planning efforts frequently focus on natural resource conservation as the primary motivation for and primary outcome of adaptation activities. Here, we present an analysis of the sustainability of community based adaptation (CBA) activities in 20 community based organizations (CBO) that were established in the Blue Nile Highlands of Ethiopia in order to promote resilience to climate change. CBA sustainability was assessed through multi-criteria analysis using the Analytic Hierarchy Process (AHP). Sustainability was considered for social, institutional, technical, financial, and environmental dimensions, with second-order indicators or factors defined for each dimension. According to this analysis, CBA efforts of two thirds of the COBs studied were found to be unsustainable in all dimensions and CBA efforts of the remaining CBOs were found to be at risk of unsustainability. A number of barriers to CBA sustainability were identified, including inadequacies in community participation, training of local community members, local government commitment, farmer capacity, and bureaucratic efficiency. Participatory evaluation of CBA, however, revealed that many of these barriers can be attributed to the decision to use conservation of natural resources as the primary framework for CBA activities. Based on this evaluation, new efforts have been developed that use markets as the entry and exit points for sustainability activities. Lessons learned in this project are relevant for CBA efforts in other agricultural regions of the developing world.
Bitmap-Wise Wireless M-Bus Coordination for Sustainable Real Time Energy Management
Authors: Hwang Kwang-il , Nam Sung-wook
Published: July 2014

Even though WM-Bus is being considered to be the most promising network protocol for smart metering, it is not suitable for a sustainable real-time home energy management system (HEMS), which requires higher reliability and longer lifetime despite real time bi-directional communications. Therefore, in this paper we propose a Bitmap-wise WM-Bus (BWM-Bus), coping well with sustainable real-time HEMS. In particular, the proposed scheme addresses the several problems in WM-Bus for HEMS by introducing novel functions: asynchronous meter trigger, adaptive slot scheduling, and bitmap-wise retransmission request. Through experiments, we demonstrate that BWM-Bus guarantees higher data success ratio with lower data aggregation time, as well as longer lifetime than WM-Bus standard.
Identification of Distinct Bacillus thuringiensis 4A4 Nematicidal Factors Using the Model Nematodes Pristionchus pacificus and Caenorhabditis elegans
Authors: Iatsenko Igor , Nikolov Angel , Sommer Ralf
Published: July 2014

Bacillus thuringiensis has been extensively used for the biological control of insect pests. Nematicidal B. thuringiensis strains have also been identified; however, virulence factors of such strains are poorly investigated. Here, we describe virulence factors of the nematicidal B. thuringiensis 4A4 strain, using the model nematodes Pristionchus pacificus and Caenorhabditis elegans. We show that B. thuringiensis 4A4 kills both nematodes via intestinal damage. Whole genome sequencing of B. thuringiensis 4A4 identified Cry21Ha, Cry1Ba, Vip1/Vip2 and β-exotoxin as potential nematicidal factors. Only Cry21Ha showed toxicity to C. elegans, while neither Cry nor Vip toxins were active against P. pacificus, when expressed in E. coli. Purified crystals also failed to intoxicate P. pacificus, while autoclaved spore-crystal mixture of B. thuringiensis 4A4 retained toxicity, suggesting that primary β-exotoxin is responsible for P. pacificus killing. In support of this, we found that a β-exotoxin-deficient variant of B. thuringiensis 4A4, generated by plasmid curing lost virulence to the nematodes. Thus, using two model nematodes we revealed virulence factors of the nematicidal strain B. thuringiensis 4A4 and showed the multifactorial nature of its virulence.
The Effect of Experimental Fusarium Mycotoxicosis on Microbiota Diversity in Porcine Ascending Colon Contents
Authors: Piotrowska Małgorzata , Śliżewska Katarzyna , Nowak Adriana , Zielonka Łukasz , Żakowska Zofia , Gajęcka Magdalena , Gajęcki Maciej
Published: July 2014

The objective of the study was to determine the effect of exposure of pigs to the Fusarium mycotoxins zearalenone (ZEN) and deoxynivalenol (DON), administered together and separately, on the colon microbiota. An experiment was conducted for 42 days on gilts, randomly assigned to four groups and administered either ZEN, DON, ZEN+DON, or a placebo. The number of aerobic mesophilic bacteria, yeasts, molds, anaerobic Clostridium perfringens, fecal streptococci, Enterobacteriaceae, Escherichia coli, and lactic acid bacteria (LAB) were determined in the contents of the ascending colon. The influence of mycotoxins on the functional diversity of the colonic microbiota was assessed using EcoPlate tests (Biolog). Analysis revealed the predominance of LAB in all groups of pigs. Zearalenone, administered separately and together with DON, was found to have an adverse effect on mesophilic aerobic bacteria, but only after long exposure to this mycotoxin. During the six weeks of the experiment, the concentration of C. perfringens, E. coli, and other bacteria in the family Enterobacteriaceae was most considerably reduced in the experimental groups exposed to zearalenone, both separately and together with DON. Mycotoxins also affected the functional biodiversity of microorganisms. Both Shannon’s diversity index and the number of catabolized substrates in Biolog plate (the R index) were much higher in the group subjected to mixed mycotoxicosis.
Synthesis of new, highly luminescent bis(2,2’-bithiophen-5-yl) substituted 1,3,4-oxadiazole, 1,3,4-thiadiazole and 1,2,4-triazole
Authors: Kostyuchenko Anastasia S , L.Yurpalov Vyacheslav , Kurowska Aleksandra , Domagala Wojciech , Pron Adam , Fisyuk Alexander S
Published: July 2014

A new synthetic approach towards the preparation of functionalised, soluble, donor–acceptor (DA) alkylbithiophene derivatives of oxadiazole, thiadiazole and triazole is reported. Taking advantage of the Fiesselmann reaction, reactive bithiophene synthons having alkyl or alkoxy substituents at designated positions are prepared. Following a synthetic strategy, featuring the bottom-up approach, sequential structural elements are built, starting from a simple thiophene compound, until the target molecule is obtained, all in good yield. Supplementing the well established methods of oxadiazole and thiadiazole synthesis, efficient ring closure reaction affording a 4H-1,2,4-triazole unit is presented. All target ambipolar compounds display strong photoluminescence with measured quantum yields up to 0.59. Modification of the demonstrated synthetic routes may be exploited for the preparation of longer, specifically functionalised oligothiophenes, coupled to other heteroaromatic cores.
Phytochemical-induced reduction of pulmonary inflammation during Klebsiella pneumoniae lung infection in mice
Authors: Bansal Shruti , Chhibber Sanjay
Published: July 2014

Introduction: Curcumin, a polyphenol derived from the herb Curcuma longa, has number of antioxidant, anti-inﬂammatory, antimicrobial, and anti-carcinogenic activities. Its anti-inflammatory property was here studied alone and in combination with clarithromycin in a mouse model of acute inflammation. Methodology: A total of 80 mice divided into four groups were used. Mice receiving curcumin and/or clarithromycin were fed orally with curcumin (150 mg/kg/day) for 15 days prior to infection, whereas clarithromycin was administered orally (30 mg/kg/day) 12 hours post infection. Simultaneously, the control group receiving only infection but no treatment was also set up. Bacterial load estimation, histopathological examination and analysis of inflammatory parameters was performed on various days for all groups. Results: Intranasal inoculation of bacteria resulted in significant increase in neutrophil infiltration along with increased production of various inflammatory mediators (malondialdehyde, myeloperoxidase, nitric oxide, TNFα) in lung tissue. Clarithromycin treatment significantly decreased the bacterial load and other inflammatory components in infected mice, but animals receiving curcumin alone or in combination with clarithromycin showed a much more significant (p < 0.05) reduction in neutrophil influx along with reduced levels of various inflammatory parameters. Though treatment with curcumin did not reduce the bacterial load, in combination with clarithromycin, both bacterial proliferation and lung tissue damage were checked. Conclusions: Though clarithromycin, because of its associated side effects, may not be the preferred treatment, it can be used in conjunction with curcumin. The latter as an adjunct therapy will help to down regulate the exaggerated state of immune response during acute lung infection.
Comparison of two different skin preparation strategies for open cardiac surgery
Authors: Hanedan Muhammet Onur , Unal Ertekin Utku , Aksoyek Aysen , Basar Veysel , Tak Sercan , Tutun Ufuk , Isik Hasan , Birincioglu C.Levent
Published: July 2014

Introduction: Surgical site infection (SSI) is a serious complication after cardiac surgery; skin preparation is an important step in the prevention of wound contamination with skin flora. In this study, two different skin preparation strategies (standard povidine iodine cleaning plus plain adhesive drape and microbial sealant (InteguSeal, Kimberly-Clark Health Care, Roswell, GA, USA) were compared in cardiac surgery patients. Methodology: This prospective study included 96 cardiac surgery patients randomized to either a standard plain adhesive drape (28 patients, control group) or a microbial sealant (68 patients, study group). Bacterial isolates were obtained from the wounds in the operating room before the skin incision and after the surgical procedure had ended. Results: Microorganisms were isolated from 38 patients (39.6%) in the study population. Twenty-seven of these patients were from the microbial sealant group and 11 were from the plain adhesive drape group. No postoperative wound infection was encountered in either group. No statistically significant differences between the two groups regarding the number of patients with microorganism isolation (p = 0.974) or postoperative leukocyte counts and neutrophil granulocyte percentages were observed. Conclusions: Regarding SSI after cardiac surgery, microbial sealant is equivalent to the standard skin preparation strategy applied with povidine iodine cleaning and a plain adhesive drape.
Extra-intestinal salmonellosis in a tertiary care center in South India
Authors: Sudhaharan Sukanya , Padmaja Kanne , Solanki Rachana , Lakshmi Vemu , Umabala Pamidi , Aparna Bhaskara
Published: July 2014

Introduction: The present study is a retrospective analysis of a total of 36 cases of bacteriologically proven extra-intestinal salmonellosis, managed at Nizam’s Institute of Medical Sciences, between 1987 and 2012 (25 years). The extra-intestinal sites involved were the skin, cerebrum, spleen, ovary, synovium, and the skeletal muscle. Methodology: The extra-intestinal specimens were first processed using standard methods. Colonies suspected as Salmonella were identified by standard laboratory methods, initially by manual biochemical reactions and later by the API system (bioMerieux, Marcy l’Etoile- France) and the Vitek-2 system (bioMerieux). All the Salmonella isolates were sent to Central Research Institute, Kasauli, for serotyping. Results: The predominant serotype isolated was Salmonella Typhi (S. Typhi) in 27 (75%) patients, followed by Salmonella Senftenberg (S. Senftenberg) in 5 (14%), Salmonella Paratyphi A (S. Paratyphi A) in 3 (8%), and Salmonella Typhimurium (S. Typhimurium) in 1 (3%). There was an increasing resistance to ampicillin, chloramphenicol, cephalosporins (third generation), and quinolones over the 25 years. Conclusions: The diagnosis of extra-intestinal salmonellosis requires a high degree of clinical suspicion and should be included in the differential diagnosis in patients with deep-seated abscesses.
Detection of plasmid-mediated qnr genes among the quinolone-resistant Escherichia coli isolates in Iran
Authors: Firoozeh Farzaneh , Zibaei Mohammad , Soleimani-Asl Younes
Published: July 2014

Introduction: Plasmid-mediated quinolone resistance, which complicates treatment, has been increasingly identified in Escherichia coli isolates worldwide. The purpose of this study was to identify the plasmid-mediated qnrA and qnrB genes among the quinolone-resistant Escherichia coli isolated from urinary tract infections in Iran. Methodology: A total of 140 Escherichia coli isolates were collected between March and October 2012 from urinary tract infections in Khorram Abad, Iran. All isolates were tested for quinoloe resistance using the disk diffusion method. Also, all quinolone-resistant isolates were screened for the presence of the qnrA and qnrB genes by polymerase chain reaction. Minimum inhibitory concentrations (MICs) of ciprofloxacin for the qnr-positive isolates were determined. Results: One hundred sixteen (82.8%) of 140 Escherichia coli isolates were nalidixic acid-resistant; among them, 14 (12.1%) and 9 (7.8%) were qnrA and qnrB-positive, respectively. Two quinolone-resistant isolates harbored both qnrA and qnrB. Among 63 ciprofloxacin-resistant isolates, 14 (22.2%) and 9 (14.3%) were found to carry qnrA and qnrB genes, respectively. The ciprofloxacin MIC range was 0.25–512 μg/mL for 23 qnr-positive Escherichia coli isolates, 18 of which had MICs values of 4–512 μg/mL. Conclusion: Our study shows that the frequency of plasmid-mediated quinolone resistance genes among E. coli isolates in Iran is high.
HIV-1 and GBV-C co-infection in Venezuela
Authors: Rodriguez Anny Karely , Garzaro Domingo José , Loureiro Carmen Luisa , Gutierrez Cristina R , Ameli Gladys , Jaspe Rossana Celeste , Porto Leticia , Monsalve Francisca , Pozada Angela , Vázquez Luzmary , Quinones-Mateu Miguel E , Pujol Flor Helene , Rangel Hector Rafael
Published: July 2014

Introduction: Co-infection with GB virus C (GBV-C) in patients infected with human immunodeficiency virus 1 (HIV-1) has been associated with prolonged survival. The aim of this study was to evaluate the prevalence of GBV-C infection among HIV-1-infected patients in Venezuela, and to determine the effects of the co-infection on the levels of relevant cytokines. Methodology: Plasma samples were collected from 270 HIV-1-seronegative and 255 HIV-1-seropositive individuals. GBV-C infection was determined by RT-PCR of the NS5 region and genotyped by sequence analysis of the 5´UTR region. HIV-1 strains were characterized by sequence analysis of pol, vif, env, and nef genes. Selected cytokines were evaluated by ELISA. Results: Ninety-seven of 525 (18.5%) plasma samples tested positive for GBV-C RNA. A significantly higher prevalence of GBV-C was found among HIV-1 patients compared to HIV-1-seronegative individuals (67/255, 26% versus 30/270, 11%; p < 0.001). Statistical difference was observed in the viral load between HIV-1+GBV-C+ and HIV-1+GBV-C- (p = 0.014), although no differences in CD4+ cell counts were found between both groups. TNFα concentration was higher in HIV-1+GBV-C- than in HIV-1+GBV-C+ patients (25.9 pg/mL versus 17.3 pg/mL; p = 0.02); RANTES expression levels were more variable in GBV-C co-infected patients and more frequently elevated in HIV-1 mono-infected patients compared to patients co-infected with GBV-C. Conclusions: The previously observed beneficial effect of co-infection with HIV-1 and GBV-C on disease progression is complex and might be due in part to a change in the cytokine environment. More studies are required to understand the interaction between both viruses.