bluuebunny/crossref_metadata_2025 huggingface dataset:
Development and evaluation of an ensemble model to identify host-related metadata from fecal microbiota of zoo-housed mammals
Authors: Zoelzer Franziska , Monteiro Daniel dos Santos , Dierkes Paul Wilhelm
Published: June 2024

Much research has been conducted to describe the factors that determine the fecal microbiome, with diet and host phylogeny as the main drivers. The influence of diet has been described at different levels. Firstly, there are major differences in the microbiomes of herbivorous and carnivorous species and secondly the morphology of the digestive system also determines the composition and diversity of the microbiota. In this study, we aim to describe the influence of the three factors – diet, digestive system and host - on the microbiota in order to develop a model that is able to characterize host-specific metadata from an unknown fecal sample. We therefore analyzed the 16s rRNA from 525 fecal samples of 14 zoo-housed species belonging to different phylogenetic groups including herbivores, carnivores and omnivores. We found significant differences in the bacterial taxa correlated with these groups. While herbivores show positive correlations with a large number of bacterial taxa, we found fewer taxa correlating with carnivores or omnivores. We also detected considerable differences in the microbiota of the ruminant, hindgut fermenting and simple digestive system. Based on these results, we developed a logistic ensemble model, that predicts the diet and based on these findings either the herbivorous digestive system or the carnivorous host-family from a given fecal microbiota composition. This model is able to effectively discriminate herbivores, omnivores and carnivores. It also excels at predicting the herbivore-specific digestive system with 98% accuracy, further reinforcing the strong link between microbiota and digestive system morphology. Carnivorous host-family identification achieves an overall accuracy of 79%, although this performance varies between families. We provide this trained model as a tool to enable users to generate host-specific information from their microbiome data. In future research, tools such as the one presented here could lead to a combined approach of microbiome and host-specific analyses which would be a great advantage in non-invasive wildlife monitoring.
As healthy as invasive: Charybdis natator shell extract reveals beneficial metabolites with promising antioxidant and anti-inflammatory potentials
Authors: Galal-Khallaf Asmaa , Samir Aboali Esraa , El-Sayed Hassab El-Nabi Sobhy , El-Tantawy Ahmed I. , Schott Eric J. , Mohammed-Geba Khaled
Published: June 2024

Crabs of the genus Charybdis are some of the world’s most aggressive and voracious marine invasive crustaceans. They are found in a wide variety of ecosystems in the Red Sea. Their near ubiquity in diverse marine habitats, however, makes them a possible resource for novel marine-derived bioactive products. To provide an important insight into the potential for C. natator as a beneficial product, its shell methanolic extract was chromatographically analyzed for identification of potential bioactive ingredients. Additionally, two different doses, i.e. a low and a high dose, of this extract were tested for their ability to protect against copper-induced oxidative stress and proinflammatory response in adult zebrafish Danio rerio. Gene expression levels of transcripts of proinflammatory mediators, i.e. nf-κβ and tnf-α; antioxidant enzymes, i.e. sod, cat, and gpx; and lipid-metabolizing enzymes, i.e., acox1 and fasn, were determined. The results showed that C. natator shell is rich in potential bioactive metabolites, including diverse unsaturated fatty acids, alkanes, flavonoids, and phenolic acids. Most antioxidant and proinflammatory transcripts in the protected groups were restored to levels that were lower than those in the CuSO4-stressed group. The low dose showed special success in inducing these effects. Also, the low-dose-protected group showed significantly elevated acox1 and decreased fasn, suggesting the capability of crab shell extract at a low dose to assist lipolysis and inhibit lipogenesis. The abundant presence of saturated fatty acids in the shell extract can be the reason for the inadequacy of the high dose to promote the antioxidant and anti-inflammatory activities. These results suggest that there is a potential to develop therapeutic industrial uses for C. natator shell, instead of considering it as a discard. Its wealth of bioactive metabolites may contribute to the market for natural products to combat inflammatory and oxidative stress, the origin of many diseases in the modern world.
Aged polyethylene microplastics and glyphosate-based herbicide co-exposure toxicity in Pacific white shrimp (Litopenaeus vannamei)
Authors: Thammatorn Worrayanee , Cholewińska Paulina , Kruangkum Thanapong , Palić Dušan
Published: June 2024

Microplastics and glyphosate-based herbicides (GBHs) unavoidably contaminate aquatic environments, yet their combined effect on aquatic organisms has been scarcely investigated. We present a short-term study on individual and combined effects of aged polyethylene (PE) microplastics and GBH exposures at environmentally relevant concentrations on oxidative damage, antioxidant responses, immune parameters, and hepatopancreas histology in shrimp (Litopenaeus vannamei). In addition, acetylcholinesterase (AChE) was evaluated as a biomarker of GBH exposure. After 96 hours of exposure, individual PE microplastic exposure slightly influenced oxidative status, immune parameters, and histology. Decreases in AChE concentration and alterations in oxidative status, immunity, and cell population in hepatopancreas were observed in single GBH-exposed shrimp. The combinations of aged PE microplastics and GBH induced some changes that differed from individual GBH exposures. For instance, some alterations implied that the presence of aged PE microplastics may alter GBH toxicity to L. vannamei (AChE concentration and some expressions of immune-related genes). In conclusion, our results suggest that single exposure of aged PE microplastics at environmental concentration may slightly affect the health of L. vannamei and that aged PE microplastics are likely to modify the toxicity of other co-exposed chemicals.
Exploitation of mesopelagic fish stocks can impair the biological pump and food web dynamics in the ocean
Authors: Dişa Deniz , Akoglu Ekin , Salihoglu Baris
Published: June 2024

The demand for marine living resources is increasing at an unprecedented scale because of the need for continuous food provision to the world’s population. The potential of already exploited fish stocks to meet this demand is limited. Therefore, mesopelagic fish have recently become attractive potential targets for fisheries because of their vast conjectured biomass. However, the role of mesopelagic fish in marine ecosystems is poorly understood. Before developing commercial exploitation plans, the relationship between mesopelagic fish and other groups in the marine food web and biogeochemical cycles should be analyzed quantitatively. In this study, we coupled a one-dimensional biogeochemical model (North Atlantic Generic Ecosystem Model) with a higher-trophic-level food web model (Ecopath with Ecosim) for the Sargasso Sea in the North Atlantic to investigate changes in carbon export and trophodynamics under two mesopelagic fish harvesting scenarios. The coupled model represented the marine food web from plankton to fish and mammals, vertical carbon export dynamics, and their interaction with fisheries. The results showed that when mesopelagic fish were not harvested, they contributed approximately 6% of the total carbon export in the surface waters, but up to 40% of the total carbon export below 400 m. Harvesting mesopelagic fish altered the energy transfers within the food web as well as to fisheries. The ecological footprint of fisheries increased significantly. Due to declining competition in the food web, epipelagic fish increased to exert elevated grazing pressure on phytoplankton; hence, phytoplankton-mediated carbon export decreased. The total carbon export decreased by 14% due to the decreases in mesopelagic fish- and phytoplankton-mediated carbon exports. The simulated increase in zooplankton- and non-mesopelagic fish-mediated carbon exports (up to 92% and 96%, respectively) did not compensate for the total decrease in carbon exports under harvesting scenarios. The findings of this study highlighted that mesopelagic fish not only have a direct control on carbon dynamics by their metabolic releases and diel vertical migration, but also strong indirect controls through prey-predator interactions within the food web. Therefore, the implications of harvesting mesopelagic fish should be carefully considered from a holistic perspective.
The need for interdisciplinary research in marine sciences – A MERry outlook
Authors: von Hellfeld Rebecca , Sujiwo Aryo Sahid , Seeram Salomi , Olatunji Paul Oluwatimileyin , Parga Martinez Karla , Govindankutty Menon Anjaly , Beckmann Clara , Marigómez Ionan , Soto Manu
Published: June 2024

The global oceans are facing a plethora of pressures, leading to cross-national impacts on marine ecosystems, wildlife, and resource users. Interdisciplinarity is integrating knowledge and methods from different disciplines to generate a comprehensive output. Due to the trans-boundary nature of marine habitats and stressors, interdisciplinary research forms the basis to addressing pressing matters in ocean health and conservation. To this end, the Marine Environment and Resources (MER) master programme was developed at the beginning of the century, enabling students to develop a well-rounded understanding of ocean science. The programme has since become a recognised Erasmus Mundus degree and has had almost 400 graduates. In September 2022, the first MER community summit was held, being a landmark for the building of a long-lasting global community to discuss and deal with priority challenges of the UN Decade of Oceans Science. This summit has highlighted that to understand the state of the oceans and improve conservation efforts, international collaboration is required (including those out with the academic realm). The following article aims to highlight the successes of the programme in aiding the development and training of interdisciplinary researchers from a plethora of backgrounds, uniquely suitable for addressing current problems.
Machine learning-based prediction of compressive strength in circular FRP-confined concrete columns
Authors: Cui Ruifu , Yang Huihui , Li Jiehong , Xiao Yao , Yao Guowen , Yu Yang
Published: June 2024

This research aims to evaluate the compressive strength of FRP-confined columns using machine learning models. By systematically organizing codes and models proposed by various researchers, significant indicators influencing compressive strength have been identified. A comprehensive database comprising 366 samples, including both CFRP and GFRP, has been assembled. Based on this database, a machine learning model was developed to accurately predict compressive strength. A thorough evaluation was conducted, comparing models proposed by codes and researchers. Additionally, a detailed parameter analysis was performed using the XGBoost model. The findings highlight the importance of both code-based and researcher-proposed models in enhancing our understanding of compressive strength. However, certain models show tendencies towards conservative or overestimated predictions, indicating the need for further accuracy enhancement. Among the models considered, the XGBoost model demonstrated the highest goodness of fit (0.97) and the lowest coefficient of variation (8%), making it a suitable choice for investigating compressive strength. Notable parameters significantly influencing compressive strength include FRP thickness, elastic modulus, and concrete strength.
Placebo and nocebo effects of percutaneous needle electrolysis and dry-needling: an intra and inter-treatment sessions analysis of a three-arm randomized double-blinded controlled trial in patients with patellar tendinopathy
Authors: Doménech-García Víctor , Pecos-Martín Daniel , Blasco-Abadía Julia , Bellosta-López Pablo , López-Royo María Pilar
Published: June 2024

Objective

This study aimed to investigate the influence of potential placebo and nocebo effects on pain perception of percutaneous needle electrolysis (PNE) in individuals with patellar tendinopathy.

Methods

In this secondary analysis of a three-arm randomized double-blinded controlled trial, intra and inter-session pain perception data from 48 sporting participants with patellar tendinopathy between 18 and 45 years were investigated. Participants were divided into 3 parallel groups: “no-sham group” [PNE intervention], “single-sham group” [sham PNE by using dry needling], and “double-sham group” [sham PNE by using sham needles]. Every group received 4 sessions of the needling therapies targeting the patellar tendon over 8 weeks and was instructed to perform a unilateral eccentric exercise program of the quadriceps muscle on the affected side. Clinical and needle-related pain was assessed before, during, and after each treatment session using a visual analog scale.

Results

No differences were found between groups intra- or inter-session in terms of pain reduction (P = 0.424) despite clinical pain decreased in all groups since the first treatment session (P < 0.001). Furthermore, although the double-sham group showed a lower percentage of participants reporting needle-related pain during needle intervention (P = 0.005), the needle-related pain intensity after needle intervention was similar between groups (P = 0.682). Moreover, there were no group differences for the duration of pain sensation after any needle intervention (P = 0.184), extending in many cases beyond 24 h.

Conclusion

Needling therapies for individuals with patellar tendinopathy are prone to elicit placebo effects regarding clinical pain and nocebo effects regarding needling-related pain. Clinicians and physical therapists treating musculoskeletal pain conditions should consider the added value and potential mechanisms of action before routinely using needle techniques.
The relationship between muscle mass and fat content in body composition and non-alcoholic fatty liver disease in the Chinese general population: a cross-sectional study
Authors: Xu Guoqiong , Wu Yuanyuan , Chen Jie , Xiang Dan , Li Dongji
Published: June 2024

Introduction

Non-alcoholic fatty liver disease (NAFLD) poses a significant global health challenge, necessitating comprehensive exploration of its etiology. This study investigates the intricate relationship between body composition and NAFLD prevalence, focusing on the balance between muscle mass and fat content.

Methods

Employing a retrospective cross-sectional design, 2,493 participants undergoing routine health examinations were analyzed. Body compositions, including muscle mass and fat, were measured using bioelectrical-impedance analysis. The prevalence of NAFLD was assessed based on clinical guidelines.

Results

This study included 2,493 patients, including 1,601 (64.2%) men and 892(35.8%) women. The average age of these participants was 46.0 ± 13.1 years, with a mean body mass index of 25.0 ± 3.6 kg/m2. The levels of fat free mass (FFM) to fat mass (FM) ratio (FFM/FM) and appendicular skeletal muscle mass index (ASMI) demonstrated a negative association with the prevalence of NAFLD (OR (95% CI): 0.553 (0.427–0.704) and 0.850 (0.730–0.964), p < 0.001 and p = 0.022, respectively). Liver function further elucidates the multifaceted impact of body composition on hepatic health. In contrast to other parameters, FFM/FM displayed a negative association with liver damage indicators, including a negative association with alanine aminotransferase (Beta±SE: −1.00 ± 0.17, p < 0.001), with aspartate aminotransferase showing borderline significance (Beta±SE: −0.26 ± 0.15, p = 0.084). Similar associations were also evident in terms of liver productive function and bilirubin metabolism.

Conclusion

Our study offers novel insights into the nuanced interplay between body composition and NAFLD. Recognizing the significance of the balance between muscle and fat provides a foundation for tailored interventions that may reshape the landscape of NAFLD prevention and management.
Management of spontaneous septic hypothermia in intensive care. A national survey of French intensive care units
Authors: Eustache Gabriel , Le Balc’h Pierre , Launey Yoann
Published: June 2024

The benefit of temperature control in sepsis or septic shock is still under debate in the literature. We developed a national survey to assess the current state of knowledge and the practical management of spontaneous septic hypothermia in French intensive care units. Out of more 764 intensivists who were contacted, 436 responded to the survey. The majority of doctors (52.4%) considered spontaneous septic hypothermia to be a frequently encountered situation in intensive care, and 62.1% were interested in this problem. Definition of spontaneous septic hypothermia among French intensivists was not consensual. More than half of the doctors questioned (57.1%) stated that they did not actively rewarm patients suffering from spontaneous septic hypothermia.
A decade of collaboration in medicines regulation: healthcare professionals engaging with the European Medicines Agency
Authors: Silva Ivana , Gabrielli Giulia , Garcia Burgos Juan , Moulon Isabelle , Calvo Rojas Gonzalo , Jaeger Ulrich , Giuliani Rosa
Published: June 2024

The article shows that the input given by healthcare professionals (HCPs) adds value to the regulatory processes surrounding the development, authorisation, and monitoring of a medicine, but is also an instrument for accountability, trust, mutual exchange as well as an insight into the public health issues that matter most to one of the key stakeholder groups the Agency works with. We highlight the role of HCPs in the EU regulatory process and take stock of the first 10 years of the Framework for Interaction with HCPs to describe how practises have evolved over this time to meet the goals of informing, consulting and improving trust in the EU regulatory system. We will analyse what led European Medicines Agency (EMA) to develop this framework through to the next steps and where the interaction might lead in the future.
Effect of single-patient room design on the incidence of nosocomial infection in the intensive care unit: a systematic review and meta-analysis
Authors: Zhang Zheng , Tan Xiaojiao , Shi Haiqing , Zhao Jia , Zhang Huan , Li Jianbo , Liao Xuelian
Published: June 2024

Background

Previous studies have yielded varying conclusions regarding the impact of single-patient room design on nosocomial infection in the intensive care unit (ICU). We aimed to examine the impact of ICU single-patient room design on infection control.

Methods

We conducted a comprehensive search of PubMed, Embase, the Cochrane Library, Web of Science, CNKI, WanFang Data, and CBM databases from inception to October 2023, without language restrictions. We included observational cohort and quasi-experimental studies assessing the effect of single- versus multi-patient rooms on infection control in the ICU. Outcomes measured included the nosocomial infection rate, incidence density of nosocomial infection, nosocomial colonization and infection rate, acquisition rate of multidrug-resistant organisms (MDROs), and nosocomial bacteremia rate. The choice of effect model was determined by heterogeneity.

Results

Our final analysis incorporated 12 studies involving 12,719 patients. Compared with multi-patient rooms in the ICU, single-patient rooms demonstrated a significant benefit in reducing the nosocomial infection rate (odds ratio [OR]: 0.68; 95% confidence interval [CI]: 0.59, 0.79; p < 0.00001). Analysis based on nosocomial infection incidence density revealed a statistically significant reduction in single-patient rooms (OR: 0.64; 95% CI: 0.44, 0.92; p = 0.02). Single-patient rooms were associated with a marked decrease in nosocomial colonization and infection rate (OR: 0.44; 95% CI: 0.32, 0.62; p < 0.00001). Furthermore, patients in single-patient rooms experienced lower nosocomial bacteremia rate (OR: 0.73; 95% CI: 0.59, 0.89; p = 0.002) and lower acquisition rate of MDROs (OR: 0.41; 95% CI: 0.23, 0.73; p = 0.002) than those in multi-patient rooms.

Conclusion

Implementation of single-patient rooms represents an effective strategy for reducing nosocomial infections in the ICU.

Systematic review registration

https://www.crd.york.ac.uk/PROSPERO/).
Genotypic and phenotypic analysis of Salmonella enterica serovar Derby, looking for clues explaining the impairment of egg isolates to cause human disease
Authors: Traglia German Matias , Betancor Laura , Yim Lucia , Iriarte Andrés , Chabalgoity José Alejandro
Published: June 2024

Salmonella enterica serovar Derby causes foodborne disease (FBD) outbreaks worldwide, mainly from contaminated pork but also from chickens. During a major epidemic of FBD in Uruguay due to S. enteritidis from poultry, we conducted a large survey of commercially available eggs, where we isolated many S. enteritidis strains but surprisingly also a much larger number (ratio 5:1) of S. Derby strains. No single case of S. Derby infection was detected in that period, suggesting that the S. Derby egg strains were impaired for human infection. We sequenced fourteen of these egg isolates, as well as fifteen isolates from pork or human infection that were isolated in Uruguay before and after that period, and all sequenced strains had the same sequence type (ST40). Phylogenomic analysis was conducted using more than 3,500 genomes from the same sequence type (ST), revealing that Uruguayan isolates clustered into four distantly related lineages. Population structure analysis (BAPS) suggested the division of the analyzed genomes into nine different BAPS1 groups, with Uruguayan strains clustering within four of them. All egg isolates clustered together as a monophyletic group and showed differences in gene content with the strains in the other clusters. Differences included variations in the composition of mobile genetic elements, such as plasmids, insertion sequences, transposons, and phages, between egg isolates and human/pork isolates. Egg isolates showed an acid susceptibility phenotype, reduced ability to reach the intestine after oral inoculation of mice, and reduced induction of SPI-2 ssaG gene, compared to human isolates from other monophyletic groups. Mice challenge experiments showed that mice infected intraperitoneally with human/pork isolates died between 1–7 days p.i., while all animals infected with the egg strain survived the challenge. Altogether, our results suggest that loss of genes functions, the insertion of phages and the absence of plasmids in egg isolates may explain why these S. Derby were not capable of producing human infection despite being at that time, the main serovar recovered from eggs countrywide.
Deciphering the antiviral nature of endophytic Bacillus spp. against groundnut bud necrosis virus in cowpea and tomato
Authors: Gayathri M. , Sharanya R. , Renukadevi P. , Nakkeeran S. , Saranya N. , Varanavasiappan S. , Raveendran M. , Suhail A. , Alkahtani Saad
Published: June 2024

Tomato, the important vegetable crop, is severely affected by Orthotospovirus arachinecrosis which impacts heavy economic losses. The application of insecticide to manage viral diseases is not an environmentally safe approach. In view of these issues, we investigated the antiviral efficacy of 21 bacterial endophytes against GBNV in local lesion host (Cowpea-VBN3). Based on the reduction in lesion number and virus titer as estimated through both DAC ELISA and qPCR in cowpea, the bacterial endophytes viz., Bacillus licheniformis Soya1, Bacillus tequilensis NBL6, and Bacillus velezensis VB7 were selected and further tested in tomato. The study revealed the well-defined antiviral efficacy of these endophytes against GBNV. The percentage of disease incidence ranged from 16 to 24% in endophyte-treated tomato plants compared with untreated plants (88%). In addition, symptom severity was reduced, and the application of endophytes also in promotion of the growth compared with untreated control. DAC ELISA revealed that the tomato plants treated with bacterial endophytes challenged with GBNV showed reduction in the virus titer (0.26–0.39 @ OD 405 nm) at different days of interval after inoculation (0, 5, and 10 days) compared with untreated control (3.475 @ OD 405 nm). Additionally, reduction in the viral copy number in bacterial endophyte-treated plants was evident by real-time PCR. Furthermore, tomato plants bacterized with endophytes depicted significant correlation and reduction in viral load and disease incidence as revealed by the principal-component biplot analysis. Thus, the application of bacterial endophytes has a potential role in reducing the disease incidence, severity, and titer value of GBNV, which will be the promising management approach in future to mitigate the virus infection in tomato plants.
Herpes Simplex Virus type 1 inhibits autophagy in glial cells but requires ATG5 for the success of viral replication
Authors: Ripa Inés , Andreu Sabina , Josa-Prado Fernando , Fernández Gómez Beatriz , de Castro Fernando , Arribas María , Bello-Morales Raquel , López-Guerrero José Antonio
Published: June 2024

Herpes Simplex Virus type 1 (HSV-1) 1 is a neurotropic virus that has been associated with neurodegenerative disorders. The dysregulation of autophagy by HSV-1 has been proposed as a potential cause of neurodegeneration. While studies have extensively tackled the interaction between autophagy and HSV-1 in neurons, research in glial cells is currently limited. Our studies demonstrate that HSV-1 inhibits, but not completely blocks, the formation of autophagosomes in human oligodendroglioma- and astrocytoma- derived cell lines. These findings have been confirmed in murine oligodendrocyte precursor cells (OPCs). Finally, this study investigates the impact of autophagy on HSV-1 infection in glial cells. While the lack of basal autophagy in LC3B knockout glial cells does not have a significant effect on viral infection, cells without the autophagy-related protein ATG5 exhibit reduced viral production. The absence of ATG5 leads to a decrease in the transcription and replication of viral genes, as well as a delay in the initial stages of the formation of HSV-1 replication compartments. These findings indicate that while autophagy may not play a significant role in antiviral defense in glial cells, HSV-1 may be inhibiting autophagy to exploit non-canonical functions of certain components of the autophagic machinery, such as ATG5, to benefit its lifecycle.
Relationship between carotid intima-media thickness and white matter hyperintensities in non-stroke adults: a systematic review
Authors: Humayra Syeda , Yahya Noorazrul , Ning Chai Jia , Raffali Mohd Asyiq Al-Fard bin Mohd , Mir Imtiyaz Ali , Mohamed Abdul Latiff , Manan Hanani Abdul
Published: June 2024

Introduction

Literature suggests a common pathophysiological ground between carotid atherosclerosis (CAS) and white matter alterations in the brain. However, the association between carotid intima-media thickness (CIMT) and white matter hyperintensities (WMH) has not been conclusively reported. The current systematic review explores and reports the relationship between CIMT and WMH among asymptomatic/non-stroke adults.

Methods

A recent literature search on PubMed, SCOPUS, and Web of Science databases was conducted in compliance with the PRISMA protocol. The pre-defined Population-Intervention-Comparison-Outcome-Study (PICOS) criteria included observational studies investigating the CIMT-WMH association among non-stroke adults undergoing magnetic resonance imaging and carotid ultrasound.

Results

Out of 255 potential results, 32 studies were critically assessed for selection, and finally, 10 articles were included, comprising 5,116 patients (females = 60.2%; males = 39.8%) aged between 36–71 years. The included studies earned high quality ratings (6–9) based on the Newcastle-Ottawa-Scale criteria. Qualitative synthesis showed a significantly parallel relationship between increased CIMT and greater WMH burden in 50% of the studies. In addition, significant risk factors related to the CIMT-WMH association included older age, hypertension, depression, migraine, Hispanic ethnicity, and apolipoprotein E (ɛ4) in postmenopausal women.

Conclusion

Overall, the cumulative evidence showed a consistent CIMT-WMH association in asymptomatic middle-aged and older non-stroke adults, indicating that CAS may contribute to the progression of pathologically hyperintense white matter in the brain. However, further research is warranted to infer the plausible relationship between CIMT and WMH in the absence of stroke.
Altered dynamic functional connectivity of motor cerebellum with sensorimotor network and default mode network in juvenile myoclonic epilepsy
Authors: Yang Menghan , Zhang Yingying , Zhang Tianyu , Zhou Huanyu , Ren Jiechuan , Zhou Dong , Yang Tianhua
Published: June 2024

Objective

To investigate whether changes occur in the dynamic functional connectivity (dFC) of motor cerebellum with cerebral cortex in juvenile myoclonic epilepsy (JME).

Methods

We adopted resting-state electroencephalography—functional magnetic resonance imaging (EEG-fMRI) and a sliding-window approach to explore the dFC of motor cerebellum with cortex in 36 JME patients compared with 30 and age-matched health controls (HCs). The motor cerebellum was divided into five lobules (I–V, VI, VIIb, VIIIa, and VIIIb). Additionally, correlation analyses were conducted between the variability of dFC and clinical variables in the Juvenile Myoclonic Epilepsy (JME) group, such as disease duration, age at disease onset, and frequency score of myoclonic seizures.

Results

Compared to HCs, the JME group presented increased dFC between the motor cerebellum with SMN and DMN. Specifically, connectivity between lobule VIIb and left precentral gyrus and right inferior parietal lobule (IPL); between lobule VIIIa and right inferior frontal gyrus (IFG) and left IPL; and between lobule VIIIb and left middle frontal gyrus (MFG), bilateral superior parietal gyrus (SPG), and left precuneus. In addition, within the JME group, the strength of dFC between lobule VIIIb and left precuneus was negatively (r = −0.424, p = 0.025, Bonferroni correction) related with the frequency score of myoclonic seizures.

Conclusion

In patients with JME, there is a functional dysregulation between the motor cerebellum with DMN and SMN, and the variability of dynamic functional connectivity may be closely associated with the occurrence of motor symptoms in JME.
The clinical effects of Orff music therapy on children with autism spectrum disorder: a comprehensive evaluation
Authors: Fan Qiongli , Ding Mengying , Cheng Wang , Su LiSha , Zhang Yuping , Liu Quanxing , Wu Zhifeng
Published: June 2024

Objective

This study aimed to investigate the clinical effects of Orff music therapy on children with Autism Spectrum Disorder (ASD) from the perspectives of parents, evaluators, and therapists.

Methods

93 children with ASD aged 3–6 years participated in the study. They were divided into an observation group (n = 48) receiving comprehensive rehabilitation intervention including Orff music therapy, and a control group (n = 45) receiving only comprehensive rehabilitation intervention. The Autism Behavior Checklist (ABC), Childhood Autism Rating Scale (CARS), and Psycho-educational Profile-3rd edition (PEP-3) were used for assessments before and after the intervention.

Results

There were no significant demographic differences between the two groups. Both groups showed significant improvements in Sensory, Relating, Language, CVP, EL, RL, VMI, AE, SR, and CARS scores at T1, T2, and T3 (T1 vs. T2, T2 vs. T3, T1 vs. T3) (all p < 0.05). The observation group demonstrated significant changes in Body and Object use and FM, while the control group showed some changes in these domains. Social and self-help, GM, CMB, and CVB also significantly improved in both groups after 6 months of intervention (all p < 0.05). In terms of different time intervals, the observation group showed greater improvements in Sensory, Relating, Language, CARS scores, EL, RL, and SR compared to the control group (all p < 0.05). The improvement levels in Body and Object use, CVP, FM, VMI, and AE did not differ significantly between the two groups in the T1–T2 interval, but were significantly higher in the observation group in the T2–T3 and T1–T3 intervals (all p < 0.05). The magnitude of changes in Social and self-help, GM, CMB, and CVB did not differ significantly between the groups.

Conclusion

Orff music therapy showed significant improvements in language expression, language comprehension, social skills, cognitive abilities, imitation abilities, emotional expression and fine motor in children with ASD. These findings provide support for the use of Orff music therapy as an effective intervention for children with ASD.
Case report: An uncommon presentation of extramedullary plasmacytoma without a concurrent diagnosis of multiple myeloma
Authors: Stawarz Katarzyna , Galazka Adam , Gorzelnik Anna , Durzynska Monika , Bienkowska-Pluta Karolina , Zwolinski Jakub
Published: June 2024

Introduction

Extramedullary plasmacytoma (EMP) is an uncommon solitary tumor originating from neoplastic plasma cells located outside the bone marrow. Despite its rarity, the occurrence of EMP without a concurrent diagnosis of multiple myeloma (MM) is considered extremely rare. Approximately 80–90% of EMP cases are found in the head and neck region, with a higher incidence in men aged between 50 and 60 years. The current treatment modalities include radiotherapy (RT) as a first-line approach, with surgery or chemotherapy regarded as other therapeutic options. While RT proves effective in the majority of EMP cases, there are instances where the tumor remains refractory to radiation. In this case report, we present an unusual scenario of EMP resistant to RT without concurrent signs of multiple myeloma which was successfully treated with surgery followed by systemic therapy.

Case report

A 72-year-old male was admitted to the Head and Neck Cancer Clinic with a 6-month history of swallowing difficulties. He denied experiencing weight loss or pain on swallowing. Basic laboratory tests yielded results within normal limits, except for beta-2 microglobulin. Physical examination revealed an enlarged submandibular lymph node on the right side. Fiberoptic examination identified a soft tissue polypoid mass within the right piriform fossa, slightly protruding into the vocal slit. A CT scan displayed a well-circumscribed 2 cm polypoid, homogeneously enhancing soft tissue mass adjacent to the posterior surface of the epiglottis and the right side of the tongue base. Bone marrow biopsy revealed no abnormalities, and there were no clinical or laboratory signs of multiple myeloma. Based on the tumor biopsy results and imaging studies, a diagnosis of EMP was made. Due to the lack of response to RT, surgical removal of the tumor was pursued, followed by systemic therapy. Ultimately, the patient achieved full recovery with effective disease control.

Conclusion

In conclusion, EMP without concurrent multiple myeloma is an exceedingly rare condition that demands a multidisciplinary approach for both diagnosis and treatment. Moreover, although RT continues to be the primary standard treatment for EMP, in some cases other therapeutic regimens prove to be successful.
Time to re-set our thinking about airways disease: lessons from history, the resurgence of chronic bronchitis / PBB and modern concepts in microbiology
Authors: Everard Mark L. , Priftis Kostas , Koumbourlis Anastassios C. , Shields Michael D.
Published: June 2024

In contrast to significant declines in deaths due to lung cancer and cardiac disease in Westernised countries, the mortality due to ‘chronic obstructive pulmonary disease’ (COPD) has minimally changed in recent decades while ‘the incidence of bronchiectasis’ is on the rise. The current focus on producing guidelines for these two airway ‘diseases’ has hindered progress in both treatment and prevention. The elephant in the room is that neither COPD nor bronchiectasis is a disease but rather a consequence of progressive untreated airway inflammation. To make this case, it is important to review the evolution of our understanding of airway disease and how a pathological appearance (bronchiectasis) and an arbitrary physiological marker of impaired airways (COPD) came to be labelled as ‘diseases’. Valuable insights into the natural history of airway disease can be obtained from the pre-antibiotic era. The dramatic impacts of antibiotics on the prevalence of significant airway disease, especially in childhood and early adult life, have largely been forgotten and will be revisited as will the misinterpretation of trials undertaken in those with chronic (bacterial) bronchitis. In the past decades, paediatricians have observed a progressive increase in what is termed ‘persistent bacterial bronchitis’ (PBB). This condition shares all the same characteristics as ‘chronic bronchitis’, which is prevalent in young children during the pre-antibiotic era. Additionally, the radiological appearance of bronchiectasis is once again becoming more common in children and, more recently, in adults. Adult physicians remain sceptical about the existence of PBB; however, in one study aimed at assessing the efficacy of antibiotics in adults with persistent symptoms, researchers discovered that the majority of patients exhibiting symptoms of PBB were already on long-term macrolides. In recent decades, there has been a growing recognition of the importance of the respiratory microbiome and an understanding of the ability of bacteria to persist in potentially hostile environments through strategies such as biofilms, intracellular communities, and persister bacteria. This is a challenging field that will likely require new approaches to diagnosis and treatment; however, it needs to be embraced if real progress is to be made.
Role of ghrelin in promoting catch-up growth and maintaining metabolic homeostasis in small-for-gestational-age infants
Authors: Zhang Li , Liu Jingfei , Gao Dianyong , Li Dong
Published: June 2024

Small-for-gestational age (SGA) has been a great concern in the perinatal period as it leads to adverse perinatal outcomes and increased neonatal morbidity and mortality, has an impact on long-term health outcomes, and increases the risk of metabolic disorders, cardiovascular, and endocrine diseases in adulthood. As an endogenous ligand of the growth hormone secretagotor (GHS-R), ghrelin may play an important role in regulating growth and energy metabolic homeostasis from fetal to adult life. We reviewed the role of ghrelin in catch-up growth and energy metabolism of SGA in recent years. In addition to promoting SGA catch-up growth, ghrelin may also participate in SGA energy metabolism and maintain metabolic homeostasis. The causes of small gestational age infants are very complex and may be related to a variety of metabolic pathway disorders. The related signaling pathways regulated by ghrelin may help to identify high-risk groups of SGA metabolic disorders and formulate targeted interventions to prevent the occurrence of adult dwarfism, insulin resistance-related metabolic syndrome and other diseases.
Molecular mechanism of the treatment of lung adenocarcinoma by Hedyotis Diffusa: an integrative study with real-world clinical data and experimental validation
Authors: Wang Sheng , Yin Na , Li Yingyue , Ma Zhaohang , Lin Wei , Zhang Lihong , Cui Yun , Xia Jianan , Geng Liang
Published: June 2024

Background

With a variety of active ingredients, Hedyotis Diffusa (H. diffusa) can treat a variety of tumors. The purpose of our study is based on real-world data and experimental level, to double demonstrate the efficacy and possible molecular mechanism of H. diffusa in the treatment of lung adenocarcinom (LUAD).

Methods

Phenotype-genotype and herbal-target associations were extracted from the SymMap database. Disease-gene associations were extracted from the MalaCards database. A molecular network-based correlation analysis was further conducted on the collection of genes associated with TCM and the collection of genes associated with diseases and symptoms. Then, the network separation SAB metrics were applied to evaluate the network proximity relationship between TCM and symptoms. Finally, cell apoptosis experiment, Western blot, and Real-time PCR were used for biological experimental level validation analysis.

Results

Included in the study were 85,437 electronic medical records (318 patients with LUAD). The proportion of prescriptions containing H. diffusa in the LUAD group was much higher than that in the non-LUAD group (p < 0.005). We counted the symptom relief of patients in the group and the group without the use of H. diffusa: except for symptoms such as fatigue, palpitations, and dizziness, the improvement rate of symptoms in the user group was higher than that in the non-use group. We selected the five most frequently occurring symptoms in the use group, namely, cough, expectoration, fatigue, chest tightness and wheezing. We combined the above five symptom genes into one group. The overlapping genes obtained were CTNNB1, STAT3, CASP8, and APC. The selection of CTNNB1 target for biological experiments showed that the proliferation rate of LUAD A549 cells in the drug intervention group was significantly lower than that in the control group, and it was concentration-dependent. H. diffusa can promote the apoptosis of A549 cells, and the apoptosis rate of the high-concentration drug group is significantly higher than that of the low-concentration drug group. The transcription and expression level of CTNNB1 gene in the drug intervention group were significantly decreased.

Conclusion

H. diffusa inhibits the proliferation and promotes apoptosis of LUAD A549 cells, which may be related to the fact that H. diffusa can regulate the expression of CTNNB1.
To eat or not to eat: a critical review on the role of autophagy in prostate carcinogenesis and prostate cancer therapeutics
Authors: Kurganovs Natalie Jayne , Engedal Nikolai
Published: June 2024

Around 1 in 7 men will be diagnosed with prostate cancer during their lifetime. Many strides have been made in the understanding and treatment of this malignancy over the years, however, despite this; treatment resistance and disease progression remain major clinical concerns. Recent evidence indicate that autophagy can affect cancer formation, progression, and therapeutic resistance. Autophagy is an evolutionarily conserved process that can remove unnecessary or dysfunctional components of the cell as a response to metabolic or environmental stress. Due to the emerging importance of autophagy in cancer, targeting autophagy should be considered as a potential option in disease management. In this review, along with exploring the advances made on understanding the role of autophagy in prostate carcinogenesis and therapeutics, we will critically consider the conflicting evidence observed in the literature and suggest how to obtain stronger experimental evidence, as the application of current findings in clinical practice is presently not viable.
Characterization and performance evaluation of epoxy-based plastic scintillators for gamma ray detection
Authors: Pancoko Marliyadi , Nuri Hafni L. , Prasetyo Andjar , Manaf Azwar , Jami Abdul , Yanto Ausatha R. , Kasmudin  , Utomo  , Djokorayono Rony , Suntoro Achmad
Published: June 2024

This research investigates the fabrication and analysis of plastic scintillators using an epoxy matrix. Plastic scintillators are widely used in radiation detection because of their low cost, ease of fabrication, resistance to moisture, and rapid decay time. The production process involved dissolving primary and secondary dopants, p-terphenyl (p-TP) and 1,4-bis [2-(phenyloxazolyl)]-benzene (POPOP), respectively, into a low-viscosity of cycloaliphatic amine as hardener B, which was then combined with Bisphenol-A diglycidyl ether as epoxy A. The ratio of primary and secondary dopants was varied in the experiment. The resulting scintillators were characterized using Fourier Transform Infrared Spectroscopy (FTIR) to analyze the functional groups that constitute the epoxy before and after curing. The morphology of the scintillator sample was evaluated using SEM and The thermal properties were evaluated with differential scanning calorimetry (DSC). The optical properties of the scintillator were studied using a UV-Vis Spectrophotometer and a Fluorescence Spectrophotometer. The performance of the scintillator in detecting gamma rays was evaluated using a module comprising a Photomultiplier Tube (PMT) and a Multichannel Analyzer (MCA) with sources of gamma Cesium 137. The results showed that epoxy-based scintillators can provide a detective response to gamma rays. This study demonstrates the potential of epoxy-based plastic scintillators for use in radiation detection.
Maximum correntropy unscented filter based on unbiased minimum-variance estimation for a class of nonlinear systems
Authors: Zhang Yike , Niu Ben , Song Xinmin
Published: June 2024

Introduction: The unscented Kalman filter based on unbiased minimum-variance (UKF-UMV) estimation is usually used to handle the state estimation problem of nonlinear systems with an unknown input. When the nonlinear system is disturbed by non-Gaussian noise, the performance of UKF-UMV will seriously deteriorate.

Methods: A maximum correntropy unscented filter based on the unbiased minimum variance (MCUF-UMV) estimation method is proposed on the basis of the UKF-UMV without the need for estimation of an unknown input and uses the maximum correntropy criterion (MCC) and fixed-point iterative algorithm for state estimation.

Results: When the measurement noise of the nonlinear system is non-Gaussian noise, the algorithm performs well.

Discussion: Our proposed algorithm also does not require estimation of an unknown input, and there is no prior knowledge available about the unknown input or any prior assumptions. The unknown input can be any signal. Finally, a simulation example is used to demonstrate the effectiveness and reliability of the algorithm.
A nine-degree-of-freedom optimization-based method to evaluate the isocenter coincidence of the treatment beams and image system of a medical accelerator
Authors: Zhou Yun , Qiao Jian , Yan Nan , Dai Liyan , Pu Yuehu
Published: June 2024

Medical accelerators have been widely used in tumor radiation therapy. Accurate isocenter coincidence between treatment beams and imaging systems is critical for image-guided radiation therapy (IGRT). We propose a method utilizing a phantom with marker spheres to detect the Nine Degrees of Freedom (9-DOF) in the system’s geometric model to assess isocenter coincidence between the treatment beams and the kV cone-beam computed tomography (CBCT). The phantom was initially aligned with the accelerator. Subsequently, the projections of the treatment and CBCT beams’ were acquired separately with full gantry rotation. By analyzing the marker spheres’ position in both the treatment beam and CBCT beam projections, the 9-DOF parameters were calculated. A comparison with a Winston-Lutz-based system was performed. Then, the analysis revealed imprecise circular trajectories with noticeable random deviations in the rotations of both the treatment beams and CBCT. The isocenter deviations for the treatment beams and CBCT were 0.18 mm (X), −0.49 mm (Y), and −0.35 mm (Z) after trajectories fitting, respectively. The rotational planes of the two systems exhibited a pinch angle of 0.0235°. This proposed method offers a quantitative assessment of the geometric pose of the source and the detector panel, and the isocenter coincidence of the treatment beams and imaging systems of an accelerator at each gantry angle.