bluuebunny/crossref_metadata_2025 huggingface dataset:
Autotaxin May Have Lysophosphatidic Acid-Unrelated Effects on Three-Dimension (3D) Cultured Human Trabecular Meshwork (HTM) Cells
Authors: Watanabe Megumi , Furuhashi Masato , Tsugeno Yuri , Ida Yosuke , Hikage Fumihito , Ohguro Hiroshi
Published: November 2021

Purpose: The objective of the current study was to evaluate the effects of the autotaxin (ATX)–lysophosphatidic acid (LPA) signaling axis on the human trabecular meshwork (HTM) in two-dimensional (2D) and three-dimensional (3D) cultures of HTM cells. Methods: The effects were characterized by transendothelial electrical resistance (TEER) and FITC-dextran permeability (2D), measurements of size and stiffness (3D), and the expression of several genes, including extracellular matrix (ECM) molecules, their modulators, and endoplasmic reticulum (ER) stress-related factors. Results: A one-day exposure to 200 nM LPA induced significant down-sizing effects of the 3D HTM spheroids, and these effects were enhanced slightly on longer exposure. The TEER and FITC-dextran permeability data indicate that LPA induced an increase in the barrier function of the 2D HTM monolayers. A one-day exposure to a 2 mg/L solution of ATX also resulted in a significant decrease in the sizes of the 3D HTM spheroids, and an increase in stiffness was also observed. The gene expression of several ECMs, their regulators and ER-stress related factors by the 3D HTM spheroids were altered by both ATX and LPA, but in different manners. Conclusions: The findings presented herein suggest that ATX may have additional roles in the human TM, in addition to the ATX–LPA signaling axis.
Loss of SELENOF Induces the Transformed Phenotype in Human Immortalized Prostate Epithelial Cells
Authors: Hong Lenny K. , Kadkol Shrinidhi , Sverdlov Maria , Kastrati Irida , Elhodaky Mostafa , Deaton Ryan , Sfanos Karen S. , Wang Heidi , Liu Li , Diamond Alan M.
Published: November 2021

SELENOF is a member of the class of selenoproteins in which the amino acid selenocysteine is co-translationally inserted into the elongating peptide in response to an in-frame UGA codon located in the 3′-untranslated (3′-UTR) region of the SELENOF mRNA. Polymorphisms in the 3′-UTR are associated with an increased risk of dying from prostate cancer and these variations are functional and 10 times more frequent in the genomes of African American men. SELENOF is dramatically reduced in prostate cancer compared to benign adjacent regions. Using a prostate cancer tissue microarray, it was previously established that the reduction of SELENOF in the cancers from African American men was significantly greater than in cancers from Caucasian men. When SELENOF levels in human prostate immortalized epithelial cells were reduced with an shRNA construct, those cells acquired the ability to grow in soft agar, increased the ability to migrate in a scratch assay and acquired features of energy metabolism associated with prostate cancer. These results support a role of SELENOF loss in prostate cancer progression and further indicate that SELENOF loss and genotype may contribute to the disparity in prostate cancer mortality experienced by African American men.
Heparin and Derivatives for Advanced Cell Therapies
Authors: Laner-Plamberger Sandra , Oeller Michaela , Rohde Eva , Schallmoser Katharina , Strunk Dirk
Published: November 2021

Heparin and its derivatives are saving thousands of human lives annually, by successfully preventing and treating thromboembolic events. Although the mode of action during anticoagulation is well studied, their influence on cell behavior is not fully understood as is the risk of bleeding and other side effects. New applications in regenerative medicine have evolved supporting production of cell-based therapeutics or as a substrate for creating functionalized matrices in biotechnology. The currently resurgent interest in heparins is related to the expected combined anti-inflammatory, anti-thrombotic and anti-viral action against COVID-19. Based on a concise summary of key biochemical and clinical data, this review summarizes the impact for manufacturing and application of cell therapeutics and highlights the need for discriminating the different heparins.
The Anti-Inflammatory Effect of Hydrogen Gas Inhalation and Its Influence on Laser-Induced Choroidal Neovascularization in a Mouse Model of Neovascular Age-Related Macular Degeneration
Authors: Liang I-Chia , Ko Wen-Chin , Hsu Yu-Jou , Lin Yi-Ru , Chang Yun-Hsiang , Zong Xv-Hui , Lai Pei-Chen , Chang Der-Chen , Hung Chi-Feng
Published: November 2021

Background: Age-related macular degeneration (AMD) is a leading cause of blindness in the elderly. Choroidal neovascularization (CNV) is the major pathologic feature of neovascular AMD. Oxidative damages and the ensuing chronic inflammation are representative of trigger events. Hydrogen gas (H2) has been demonstrated as an antioxidant and plays a role in the regulation of oxidative stress and inflammation. This experiment aimed to investigate the influence of H2 inhalation on a mouse model of CNV. Methods: Laser was used to induce CNV formation. C57BL/6J mice were divided into five groups: the control group; the laser-only group; and the 2 h, 5 h, and 2.5 h/2.5 h groups that received laser and H2 inhalation (21% oxygen, 42% hydrogen, and 37% nitrogen mixture) for 2 h, 5 h, and 2.5 h twice every day, respectively. Results: The severity of CNV leakage on fluorescence angiography showed a significant decrease in the H2 inhalation groups. The mRNA expression of hypoxia-inducible factor 1 alpha and its immediate downstream target vascular endothelial growth factor (VEGF) showed significant elevation after laser, and this elevation was suppressed in the H2 inhalation groups in an inhalation period length-related manner. The mRNA expression of cytokines, including tumor necrosis factor alpha and interlukin-6, also represented similar results. Conclusion: H2 inhalation could alleviate CNV leakage in a laser-induced mouse CNV model, and the potential mechanism might be related to the suppression of the inflammatory process and VEGF-driven CNV formation.
Targeted Delivery of Miconazole Employing LL37 Fragment Mutant Peptide CKR12-Poly (Lactic-Co-Glycolic) Acid Polymeric Micelles
Authors: Mori Takeshi , Yoshida Miyako , Hazekawa Mai , Ishibashi Daisuke , Hatanaka Yoshiro , Kakehashi Rie , Nakagawa Makoto , Nagao Toshihiro , Yoshii Miki , Kojima Honami , Uno Rio , Uchida Takahiro
Published: November 2021

We previously reported that conjugates of antimicrobial peptide fragment analogues and poly (lactic-co-glycolic) acid (PLGA) enhance antimicrobial activity and that the conjugated micelle structure is an effective tool for antimicrobial drug delivery. In recent years, the delivery of antimicrobial peptides to targets for antimicrobial activity has attracted attention. In this study, we targeted Candida albicans, a causative organism of catheter-related bloodstream infections, which is refractory to antimicrobial agents and is currently a problem in medical practice. We evaluated the antifungal activity of CKR12 (a mutant fragment of the human cathelicidin peptide, LL-37)-PLGA-miconazole (MCZ) micelles using nanotechnology with MCZ delivery. The prepared CKR12-PLGA-MCZ micelles were characterised by measuring dynamic light scattering, zeta potential, dilution stability, and drug release. CKR12-PLGA-MCZ micelles showed higher antifungal activity than CKR12-PLGA micelles and MCZ solution. Furthermore, scanning and transmission electron microscopy suggested that CKR12-PLGA-MCZ micelles disrupted both cell wall and cell membrane of C. albicans. Our results revealed a synergistic effect of antifungal activity using a combination of antimicrobial peptide fragment analogues and MCZ, and that MCZ is a promising tool for the delivery to target microorganisms.
Early Deconditioning of Human Skeletal Muscles and the Effects of a Thigh Cuff Countermeasure
Authors: Fovet Théo , Guilhot Corentin , Stevens Laurence , Montel Valérie , Delobel Pierre , Roumanille Rémi , Semporé Michel-Yves , Freyssenet Damien , Py Guillaume , Brioche Thomas , Chopard Angèle
Published: November 2021

Muscle deconditioning is a major consequence of a wide range of conditions from spaceflight to a sedentary lifestyle, and occurs as a result of muscle inactivity, leading to a rapid decrease in muscle strength, mass, and oxidative capacity. The early changes that appear in the first days of inactivity must be studied to determine effective methods for the prevention of muscle deconditioning. To evaluate the mechanisms of muscle early changes and the vascular effect of a thigh cuff, a five-day dry immersion (DI) experiment was conducted by the French Space Agency at the MEDES Space Clinic (Rangueil, Toulouse). Eighteen healthy males were recruited and divided into a control group and a thigh cuff group, who wore a thigh cuff at 30 mmHg. All participants underwent five days of DI. Prior to and at the end of the DI, the lower limb maximal strength was measured and muscle biopsies were collected from the vastus lateralis muscle. Five days of DI resulted in muscle deconditioning in both groups. The maximal voluntary isometric contraction of knee extension decreased significantly. The muscle fiber cross-sectional area decreased significantly by 21.8%, and the protein balance seems to be impaired, as shown by the reduced activation of the mTOR pathway. Measurements of skinned muscle fibers supported these results and potential changes in oxidative capacity were highlighted by a decrease in PGC1-α levels. The use of the thigh cuff did not prevent muscle deconditioning or impact muscle function. These results suggest that the major effects of muscle deconditioning occur during the first few days of inactivity, and countermeasures against muscle deconditioning should target this time period. These results are also relevant for the understanding of muscle weakness induced by muscle diseases, aging, and patients in intensive care.
Substrate Stiffness Drives Epithelial to Mesenchymal Transition and Proliferation through the NEAT1-Wnt/β-Catenin Pathway in Liver Cancer
Authors: Xu Xichao , Zhang Yi , Wang Xing , Li Shun , Tang Liling
Published: November 2021

Background: Extracellular matrix (ECM)-derived mechanical stimuli regulate many cellular processes and phenotypes through mechanotransduction signaling pathways. Substrate stiffness changes cell phenotypes and promotes angiogenesis, epithelial to mesenchymal transition (EMT), and metastasis in tumors. Enhanced liver tissue matrix stiffness plays a crucial role in the tumorigenesis and malignant development of liver cancer and is associated with unfavorable survival outcomes. However, how liver cancer cells sense changes in ECM stiffness and the underlying molecular mechanisms are largely unknown. Methods: Seeding HepG2 cells on the micropillar gels, HepG2 cells were assessed for responsiveness to mechanotransduction using Western blot and immunofluorescence. Conclusions: We found that higher substrate stiffness dramatically enhanced malignant cell phenotypes and promoted G1/S transition in HepG2 cells. Furthermore, nuclear paraspeckle assembly transcript 1 (NEAT1) was identified as a matrix stiffness-responsive long non-coding RNA (lncRNA) regulating proliferation and EMT in response to increasing matrix stiffness during the progression of HepG2 cells towards liver cancer phenotypes. Higher matrix stiffness contributed to enhancing NEAT1 expression, which activated the WNT/β-catenin pathway. β-catenin translocates and enters the nucleus and the EMT transcription factor zinc finger E-box binding homeobox 1 (ZEB1) was upregulated to trigger EMT. Additionally, the proteins required for matrix stiffness-induced proliferation and resistance were strikingly upregulated in HepG2 cells. Therefore, our findings provide evidence that ECM-derived mechanical signals regulate cell proliferation and drive EMT through a NEAT1/WNT/β-catenin mechanotransduction pathway in the tumor microenvironment of liver cancer.
Conditioned Media of Adipose-Derived Stem Cells Suppresses Sidestream Cigarette Smoke Extract Induced Cell Death and Epithelial-Mesenchymal Transition in Lung Epithelial Cells
Authors: Chen Tzu-Yin , Liu Chia-Hao , Chen Tsung-Hsien , Chen Mei-Ru , Liu Shan-Wen , Lin Pinpin , Lin Kurt Ming-Chao
Published: November 2021

The role of the epithelial–mesenchymal transition (EMT) in lung epithelial cells is increasingly being recognized as a key stage in the development of COPD, fibrosis, and lung cancers, which are all highly associated with cigarette smoking and with exposure to second-hand smoke. Using the exposure of human lung cancer epithelial A549 cells and non-cancerous Beas-2B cells to sidestream cigarette smoke extract (CSE) as a model, we studied the protective effects of adipose-derived stem cell-conditioned medium (ADSC-CM) against CSE-induced cell death and EMT. CSE dose-dependently induced cell death, decreased epithelial markers, and increased the expression of mesenchymal markers. Upstream regulator analysis of differentially expressed genes after CSE exposure revealed similar pathways as those observed in typical EMT induced by TGF-β1. CSE-induced cell death was clearly attenuated by ADSC-CM but not by other control media, such as a pass-through fraction of ADSC-CM or A549-CM. ADSC-CM effectively inhibited CSE-induced EMT and was able to reverse the gradual loss of epithelial marker expression associated with TGF-β1 treatment. CSE or TGF-β1 enhanced the speed of A549 migration by 2- to 3-fold, and ADSC-CM was effective in blocking the cell migration induced by either agent. Future work will build on the results of this in vitro study by defining the molecular mechanisms through which ADSC-CM protects lung epithelial cells from EMT induced by toxicants in second-hand smoke.
Translation Inhibitors Activate Autophagy Master Regulators TFEB and TFE3
Authors: Dang Thao Thi , Back Sung Hoon
Published: November 2021

The autophagy-lysosome pathway is a major protein degradation pathway stimulated by multiple cellular stresses, including nutrient or growth factor deprivation, hypoxia, misfolded proteins, damaged organelles, and intracellular pathogens. Recent studies have revealed that transcription factor EB (TFEB) and transcription factor E3 (TFE3) play a pivotal role in the biogenesis and functions of autophagosome and lysosome. Here we report that three translation inhibitors (cycloheximide, lactimidomycin, and rocaglamide A) can facilitate the nuclear translocation of TFEB/TFE3 via dephosphorylation and 14-3-3 dissociation. In addition, the inhibitor-mediated TFEB/TFE3 nuclear translocation significantly increases the transcriptional expression of their downstream genes involved in the biogenesis and function of autophagosome and lysosome. Furthermore, we demonstrated that translation inhibition increased autophagosome biogenesis but impaired the degradative autolysosome formation because of lysosomal dysfunction. These results highlight the previously unrecognized function of the translation inhibitors as activators of TFEB/TFE3, suggesting a novel biological role of translation inhibition in autophagy regulation.
From Mice to Mainframes: Experimental Models for Investigation of the Intracardiac Nervous System
Authors: Stoyek Matthew R. , Hortells Luis , Quinn T. Alexander
Published: November 2021

The intracardiac nervous system (IcNS), sometimes referred to as the “little brain” of the heart, is involved in modulating many aspects of cardiac physiology. In recent years our fundamental understanding of autonomic control of the heart has drastically improved, and the IcNS is increasingly being viewed as a therapeutic target in cardiovascular disease. However, investigations of the physiology and specific roles of intracardiac neurons within the neural circuitry mediating cardiac control has been hampered by an incomplete knowledge of the anatomical organisation of the IcNS. A more thorough understanding of the IcNS is hoped to promote the development of new, highly targeted therapies to modulate IcNS activity in cardiovascular disease. In this paper, we first provide an overview of IcNS anatomy and function derived from experiments in mammals. We then provide descriptions of alternate experimental models for investigation of the IcNS, focusing on a non-mammalian model (zebrafish), neuron-cardiomyocyte co-cultures, and computational models to demonstrate how the similarity of the relevant processes in each model can help to further our understanding of the IcNS in health and disease.
Use of Closed Incision Negative Pressure Therapy (ciNPT) in Breast Reconstruction Abdominal Free Flap Donor Sites
Authors: Wang Jennifer , Chapman Zyg , Cole Emma , Koide Satomi , Mah Eldon , Overstall Simon , Trotter Dean
Published: November 2021

Background: Closed incision negative pressure therapy (ciNPT) may reduce the rate of wound complications and promote healing of the incisional site. We report our experience with this dressing in breast reconstruction patients with abdominal free flap donor sites. Methods: A retrospective cohort study was conducted of all patients who underwent breast reconstruction using abdominal free flaps (DIEP, MS-TRAM) at a single institution (Royal Melbourne Hospital, Victoria) between 2016 and 2021. Results: 126 female patients (mean age: 50 ± 10 years) were analysed, with 41 and 85 patients in the ciNPT (Prevena) and non-ciNPT (Comfeel) groups, respectively. There were reduced wound complications in almost all outcomes measured in the ciNPT group compared with the non-ciNPT group; however, none reached statistical significance. The ciNPT group demonstrated a lower prevalence of surgical site infections (9.8% vs. 11.8%), wound dehiscence (4.9% vs. 12.9%), wound necrosis (0% vs. 2.4%), and major complication requiring readmission (2.4% vs. 7.1%). Conclusion: The use of ciNPT for abdominal donor sites in breast reconstruction patients with risk factors for poor wound healing may reduce wound complications compared with standard adhesive dressings; however, large scale, randomised controlled trials are needed to confirm these observations. Investigation of the impact of ciNPT patients in comparison with conventional dressings, in cohorts with equivocal risk profiles, remains a focus for future research.
Median Nerve Neural Mobilization Adds No Additional Benefit When Combined with Cervical Lateral Glide in the Treatment of Neck Pain: A Randomized Clinical Trial
Authors: Martin-Vera Daniel , Fernández-Carnero Josué , Rodríguez-Sanz David , Calvo-Lobo Cesar , López-de-Uralde-Villanueva Ibai , Arribas-Romano Alberto , Martínez-Lozano Pedro , Pecos-Martín Daniel
Published: November 2021

Background: This study aimed to compare the effectiveness of cervical lateral glide (CLG) added to median nerve neural mobilization (MNNM) in patients with neck pain (NP). Methods: A single-blinded randomized controlled clinical trial was carried out in a Pain Management Unit from a Hospital. A total sample of 72 patients with NP was recruited from a hospital. Patients were randomized to receive isolated CLG (n = 36) or CLG + MNNM (n = 36). Bilateral elbow extension range of motion (ROM) on upper limb neurodynamic test 1 (ULNT1), bilateral pressure pain thresholds (PPT) on the median nerve at elbow joint, C6 zygapophyseal joint and tibialis anterior, Visual analogue scale (VAS), body chart distribution of pain, active cervical ROM (CROM), Neck Disability Index (NDI), and Tampa Scale of Kinesiophobia (TSK-11) were measured at baseline as well as immediately, 15 days, and 1 month after treatment. Results: There were no statistically significant interactions (p > 0.05) between treatment and time for median nerve mechanosensitivity outcomes, pain intensity, symptom distribution, and PPT of the widespread pain assessment, as well as cervical function, and kinesiophobia. Conclusions: MNNM gave no additional benefit to CLG in patients with NP regarding pain intensity, symptom distribution, mechanosensitivity, functionality, and kinesiophobia. Only two treatment sessions and the short follow-up are important issues, therefore, justifying further studies to answer the research question with better methodology.
Analysis of Failed Two-Stage Procedures with Resection Arthroplasty as the First Stage in Periprosthetic Hip Joint Infections
Authors: Simon Sebastian , Frank Bernhard J.H. , Gardete Susana , Aichmair Alexander , Mitterer Jennyfer Angel , Dominkus Martin , Hofstaetter Jochen G.
Published: November 2021

Resection arthroplasty can be performed as the first stage of a two-stage procedure in some patients with severe periprosthetic hip joint infections with poor bone stock. This retrospective study aimed to evaluate factors associated with the subsequent failure or success of these patients. Between 2011 and 2020; in 61 (26.4%) of 231 patients who underwent a two-stage protocol of periprosthetic hip joint infections; no spacer was used in the first stage. The minimum follow-up period was 12 months. Patient’s demographics and various infection risk factors were analyzed. In total, 37/61 (60.7%) patients underwent a successful reimplantation, and four patients died within the follow-up period. Patients within the failure group had a significantly higher Charlson comorbidity index (p = 0.002); number of operations prior to resection arthroplasty (p = 0.022) and were older (p = 0.018). Failure was also associated with the presence of a positive culture in the first- and second-stage procedures (p = 0.012). Additional risk factors were persistent high postoperative CRP values and the requirement of a negative-pressure wound therapy (p ≤ 0.05). In conclusion, multiple factors need to be evaluated when trying to predict the outcome of patients undergoing resection arthroplasty as the first stage of a two-stage procedure in patients with challenging periprosthetic hip joint infections.
Conjugated Polymer/Graphene Oxide Nanocomposites—State-of-the-Art
Authors: Kausar Ayesha
Published: November 2021

Graphene oxide is an imperative modified form of graphene. Similar to graphene, graphene oxide has gained vast interest for the myriad of industrial applications. Conjugated polymers or conducting polymers are well known organic materials having conducting backbone. These polymers have semiconducting nature due to π-conjugation along the main chain. Doping and modification have been used to enhance the electrical conductivity of the conjugated polymers. The nanocomposites of the conjugated polymers have been reported with the nanocarbon nanofillers including graphene oxide. This review essentially presents the structure, properties, and advancements in the field of conducting polymer/graphene oxide nanocomposites. The facile synthesis, processability, and physical properties of the polymer/graphene oxide nanocomposites have been discussed. The conjugated polymer/graphene oxide nanocomposites have essential significance for the supercapacitors, solar cells, and anti-corrosion materials. Nevertheless, the further advanced properties and technical applications of the conjugated polymer/graphene oxide nanocomposites need to be explored to overcome the challenges related to the high performance.
A Scheme for Estimating Time-Varying Wind Stress Drag Coefficient in the Ekman Model with Adjoint Assimilation
Authors: Wu Xinping , Xu Minjie , Gao Yanqiu , Lv Xianqing
Published: November 2021

In this study, the time-varying wind stress drag coefficient in the Ekman model was inverted by the cubic spline interpolation scheme based on the adjoint method. Twin experiments were carried out to investigate the influences of several factors on inversion results, and the conclusions were (1) the inverted distributions with the cubic spline interpolation scheme were in good agreement with the prescribed distributions of the wind stress drag coefficients, and the cubic spline interpolation scheme was superior to direct inversion by the model scheme and Cressman interpolation scheme; (2) the cubic spline interpolation scheme was more advantageous than the Cressman interpolation scheme even if there is moderate noise in the observations. The cubic spline interpolation scheme was further validated in practical experiments where Ekman currents and wind speed derived from mooring data of ocean station Papa were assimilated. The results demonstrated that the variation of the time-varying wind stress drag coefficient with time was similar to that of wind speed with time, and a more accurate inversion result could be obtained by the cubic spline interpolation scheme employing appropriate independent points. Overall, this study provides a potential way for efficient estimation of time-varying wind stress drag coefficient.
Design of Propeller Series Optimizing Fuel Consumption and Propeller Efficiency
Authors: Tadros Mina , Ventura Manuel , Guedes Soares Carlos
Published: November 2021

This paper presents a comparison between different types of propellers operated in calm water to evaluate their performance behind hulls and in open-water conditions. A bulk carrier is chosen as a case study to perform the simulation and to evaluate the performance of several propeller series, namely the Wagengein B-series, Kaplan 19A, and MAU. Firstly, optimization procedures are performed by coupling a propeller design tool and a nonlinear optimizer to find the optimum design parameters of a fixed-pitch propeller. This optimization model aims to design the propeller behind the hull at the engine operating point with minimum fuel consumption and maximum propeller efficiency. The two main objectives of this study and the constraints are defined in a single fitness function to find the optimum values of the propeller geometry and the gearbox ratio. By considering the benefits of the single-objective over the multi-objective optimization problem, this model helps to find the optimum propeller for both defined objectives instead of only considering one of them, as in previous studies. Then, based on the optimized parameters, the propeller performance is calculated in open-water conditions. From the computed results, one can observe the importance of considering the hull–propulsor interaction in propeller selection.
Indocyanine Green for Leakage Control in Isolated Limb Perfusion
Authors: Zucal Isabel , Geis Sebastian , Prantl Lukas , Haerteis Silke , Aung Thiha
Published: November 2021

Sarcomas are characterized by a high metastatic potential and aggressive growth. Despite surgery, chemotherapy plays an important role in the treatment of these tumors. Optimal anti-cancer therapy with maximized local efficacy and minimized systemic side effects has been the object of many studies for a long time. To improve the local efficacy of anti-tumor therapy, isolated limb perfusion with high-dose cytostatic agents has been introduced in surgical oncology. In order to control the local distribution of substances, radiolabeled cytostatic drugs or perfusion solutions have been applied but often require the presence of specialized personnel and result in a certain exposure to radiation. In this study, we present a novel strategy using indocyanine green to track tumor perfusion with high-dose cytostatic therapy. In a rat cadaver model, the femoral vessels were cannulated and connected to a peristaltic pump to provide circulation within the selected limb. The perfusion solution contained indocyanine green and high-dose doxorubicin. An infrared camera enabled the visualization of indocyanine green during limb perfusion, and subsequent leakage control was successfully performed. Histologic analysis of sections derived proximally from the injection site excluded systemic drug dispersion. In this study, the application of indocyanine green was proven to be a safe and cost- and time-efficient method for precise leakage control in isolated limb perfusion with a high-dose cytostatic agent.
Plant Community Diversity at Two Reclaimed Mine Tailing Storage Facilities in Québec, Canada
Authors: Gagnon Alyson , Fenton Nicole J. , Sirois Pascal , Boucher Jean-François
Published: November 2021

Mining activities generate residues during the ore concentration process. These wastes are placed into large tailing storage facilities, and upon mine closure, these tailings must be reclaimed. This study aimed to determine how different reclamation methods, involving combinations of planted boreal woody species and organic amendments application (paper mill sludge biosolids, chicken manure, and topsoil) affected plant community diversity at two tailing storage facilities in Québec, Canada. We recorded the composition of the plant communities using the percent cover of plant species within 1 m × 1 m quadrats. At the Niobec mine site, paper mill sludge mixed with topsoil enhanced total plant cover was compared with the use of topsoil only; the former amendment, however, reduced evenness (J′) and diversity (1−D) due to the increased growth of grasses and invasive forbs. At the Mont-Wright site, plots having received paper mill sludge mixed with a “Norco” treatment (a mixture of chicken manure, hay, and grass seeds) produced the highest total plant cover. The Norco treatment mixed with topsoil and the single application of topsoil and biosolids produced the highest evenness (J′) and diversity (1−D). Overall, organic amendment applications promoted vegetation cover on tailings and contributed to the colonization of diverse plant communities.
Assessment of the Effect of Six Methods of Analysis and Different Sample Sizes for Biomass Estimation in Grasslands of the State of Puebla, Mexico
Authors: Velasco-Bautista Efraín , Romero-Sanchez Martin Enrique , Meza-Juárez David , Pérez-Miranda Ramiro
Published: November 2021

In the assessment of natural resources, such as forests or grasslands, it is common to apply a two-stage cluster sampling design, the application of which in the field determines the following situations: (a) difficulty in locating secondary sampling units (SSUs) precisely as planned, so that a random pattern of SSUs can be identified; and (b) the possibility that some primary sampling units (PSUs) have fewer SSUs than planned, leading to PSUs of different sizes. In addition, when considering the estimated variance of the various potential estimators for two-stage cluster sampling, the part corresponding to the variation between SSUs tends to be small for large populations, so the estimator’s variance may depend only on the divergence between PSUs. Research on these aspects is incipient in grassland assessment, so this study generated an artificial population of 759 PSUs and examined the effect of six estimation methods, using 15 PSU sample sizes, on unbiased and relative sampling errors when estimating aboveground, belowground, and total biomass of halophytic grassland. The results indicated that methods 1, 2, 4, and 5 achieved unbiased biomass estimates regardless of sample size, while methods 3 and 6 led to slightly biased estimates. Methods 4 and 5 had relative sampling errors of less than 5% with a sample size of 140 when estimating total biomass.
Genome-Wide Scanning of Potential Hotspots for Adenosine Methylation: A Potential Path to Neuronal Development
Authors: Kumar Sanjay , Tsai Lung-Wen , Kumar Pavan , Dubey Rajni , Gupta Deepika , Singh Anjani Kumar , Swarup Vishnu , Singh Himanshu Narayan
Published: November 2021

Methylation of adenosines at N6 position (m6A) is the most frequent internal modification in mRNAs of the human genome and attributable to diverse roles in physiological development, and pathophysiological processes. However, studies on the role of m6A in neuronal development are sparse and not well-documented. The m6A detection remains challenging due to its inconsistent pattern and less sensitivity by the current detection techniques. Therefore, we applied a sliding window technique to identify the consensus site (5′-GGACT-3′) n ≥ 2 and annotated all m6A hotspots in the human genome. Over 6.78 × 107 hotspots were identified and 96.4% were found to be located in the non-coding regions, suggesting that methylation occurs before splicing. Several genes, RPS6K, NRP1, NRXN, EGFR, YTHDF2, have been involved in various stages of neuron development and their functioning. However, the contribution of m6A in these genes needs further validation in the experimental model. Thus, the present study elaborates the location of m6A in the human genome and its function in neuron physiology.
Increased Depression and Anxiety Disorders during the COVID-19 Pandemic in Children and Adolescents: A Literature Review
Authors: Śniadach Justyna , Szymkowiak Sylwia , Osip Przemysław , Waszkiewicz Napoleon
Published: November 2021

Depression and anxiety disorders are a serious and increasingly commonly diagnosed problem at present. The problem applies not only to adults but also, increasingly often, to children and adolescents as well. The outbreak of the COVID-19 pandemic has further compounded the issue. There are still relatively few publications that show that quarantine and social isolation have a negative effect on the psychological well-being of children and adolescents. Above all, the situation applies to children and adolescents with pre-existing predispositions and to individuals suffering from mental disorders. The key factor in this situation seems to be putting the needs of young people first so that they can safely return to school. It is also important to provide them with effective treatment strategies and methods with which to deal with this stressful and potentially traumatic situation. Most of the mental health research during the COVID-19 pandemic has been conducted in Asia and Europe, where the disease first spread. This article presents an overview of the results of the latest Polish and international studies on the increase in depression and anxiety disorders among children and adolescents during the COVID-19 pandemic worldwide. It concludes with recommendations regarding mental health support for young people, and further directions for treatment are suggested.
Protein-Based Systems for Translational Regulation of Synthetic mRNAs in Mammalian Cells
Authors: Nakanishi Hideyuki
Published: November 2021

Synthetic mRNAs, which are produced by in vitro transcription, have been recently attracting attention because they can express any transgenes without the risk of insertional mutagenesis. Although current synthetic mRNA medicine is not designed for spatiotemporal or cell-selective regulation, many preclinical studies have developed the systems for the translational regulation of synthetic mRNAs. Such translational regulation systems will cope with high efficacy and low adverse effects by producing the appropriate amount of therapeutic proteins, depending on the context. Protein-based regulation is one of the most promising approaches for the translational regulation of synthetic mRNAs. As synthetic mRNAs can encode not only output proteins but also regulator proteins, all components of protein-based regulation systems can be delivered as synthetic mRNAs. In addition, in the protein-based regulation systems, the output protein can be utilized as the input for the subsequent regulation to construct multi-layered gene circuits, which enable complex and sophisticated regulation. In this review, I introduce what types of proteins have been used for translational regulation, how to combine them, and how to design effective gene circuits.
Supply Chain Resilience Roadmaps for Major Disruptions
Authors: Olivares-Aguila Jessica , Vital-Soto Alejandro
Published: November 2021

Background: Unexpected events or major supply chain disruptions have demonstrated the vulnerability in which supply chains operate. While supply chains are usually prepared for operational disruptions, unexpected or black swan events are widely disregarded, as there is no reliable way to forecast them. However, this kind of event could rapidly and seriously deteriorate supply chain performance, and ignoring that possibility could lead to devastating consequences. Methods: In this paper, definitions of major disruptions and the methods to cope with them are studied. Additionally, a methodology to develop supply chain resilience roadmaps is conceptualised by analysing existing literature to help plan for unexpected events. Results: The methodology is introduced to create roadmaps comprises several stages, including supply chain exploration, scenario planning, system analysis, definition of strategies, and signal monitoring. Each roadmap contains the description of a plausible future in terms of supply chain disruptions and the strategies to implement to help mitigate negative impacts. Conclusions: The creation of roadmaps calls for an anticipatory mindset from all members along the supply chain. The roadmaps development establishes the foundations for a holistic supply chain disruption preparation and analysis.
4,7-Bis(1,2,3,4,4a,9a-Hexahydro-9H-carbazol-9-yl)-[1,2,5]oxadiazolo[3,4-d]pyridazine
Authors: Chmovzh Timofey N. , Gaisin Karim S. , Rakitin Oleg A.
Published: November 2021

New donor-acceptor-donor (D-A-D)-type structures are widely used to design effective organic light-emitting diodes (OLEDs). In this communication, 4,7-bis(1,2,3,4,4a,9a-hexahydro-9H-carbazol-9-yl)-[1,2,5]oxadiazolo[3,4-d]pyridazine was obtained in a 65% yield by the treatment of 4,7-dichloro[1,2,5]oxadiazolo[3,4-d]pyridazine 1-oxide with 2,3,4,4a,9,9a-hexahydro-1H-carbazole. The structure of the newly synthesized compounds was established by means of an elemental analysis, 1H, 13C NMR, IR and UV spectroscopy, and HRMS and LR mass-spectrometry.
Laser Powder Bed Fusion (LPBF) of In718 and the Impact of Pre-Heating at 500 and 1000 °C: Operando Study
Authors: Ur Rehman Asif , Pitir Fatih , Salamci Metin Uymaz
Published: November 2021

The morphology of a melt pool has a critical role in laser powder bed fusion (LPBF). Nevertheless, directly characterizing the melt pool during LPBF is incredibly hard. Here, we present the melt pool flow of the entire melt pool in 3D using mesoscopic simulation models. The physical processes occurring within the melt pool are pinpointed. The flow patterns throughout the same are exposed and measured. Moreover, the impact of pre-heating at 500 and 1000 °C has been described. The study findings offer insights into LPBF. The findings presented here are critical for comprehending the LPBF and directing the establishment of improved metrics for process parameters optimization.
Strain Compensation and Trade-Off Design Result in Exciton Emission at 306 nm from AlGaN LEDs at Temperatures up to 368 K
Authors: Huang Shih-Ming , Lai Mu-Jen , Liu Rui-Sen , Liu Tsung-Yen , Lin Ray-Ming
Published: November 2021

In this study, we suppressed the parasitic emission caused by electron overflow found in typical ultraviolet B (UVB) and ultraviolet C (UVC) light-emitting diodes (LEDs). The modulation of the p-layer structure and aluminum composition as well as a trade-off in the structure to ensure strain compensation allowed us to increase the p-AlGaN doping efficiency and hole numbers in the p-neutral region. This approach led to greater matching of the electron and hole numbers in the UVB and UVC emission quantum wells. Our UVB LED (sample A) exhibited clear exciton emission, with its peak near 306 nm, and a band-to-band emission at 303 nm. The relative intensity of the exciton emission of sample A decreased as a result of the thermal energy effect of the temperature increase. Nevertheless, sample A displayed its exciton emission at temperatures of up to 368 K. In contrast, our corresponding UVC LED (sample B) only exhibited a Gaussian peak emission at a wavelength of approximately 272 nm.
Chitosan Biocomposites for the Adsorption and Release of H2S
Authors: Batista Mary , Pinto Moisés L. , Antunes Fernando , Pires João , Carvalho Silvia
Published: November 2021

The search for H2S donors has been increasing due to the multiple therapeutic effects of the gas. However, the use of nanoporous materials has not been investigated despite their potential. Zeolites and activated carbons are known as good gas adsorbents and their modification with chitosan may increase the material biocompatibility and simultaneously its release time in aqueous solution, thus making them good H2S donors. Herein, we modified with chitosan a series of A zeolites (3A, 4A and 5A) with different pore sizes and an activated carbon obtained from glycerin. The amount of H2S adsorbed was evaluated by a volumetric method and their release capacity in aqueous solution was measured. These studies aimed to verify which of the materials had appropriate H2S adsorption/release properties to be considered a potential H2S donor. Additionally, cytotoxicity assays using HeLa cells were performed. Considering the obtained results, the chitosan composite with the A zeolite with the larger pore opening was the most promising material to be used as a H2S donor so a further cytotoxicity assay using H2S loaded was conducted and no toxicity was observed.
Assessment of the Possibility of Using Fly Ash from Biomass Combustion for Concrete
Authors: Jura Jakub , Ulewicz Malgorzata
Published: November 2021

This article analyses the possibility of using fly ash from the combustion of wood–sunflower biomass in a fluidized bed boiler as an additive to concrete. The research shows that fly ash applied in an amount of 10–30% can be added as a sand substitute for the production of concrete, without reducing quality (compression strength and low-temperature resistance) compared to control concrete. The 28-day compressive strength of concrete with fly ash increases with the amount of ash added (up to 30%), giving a strength 28% higher than the control concrete sample. The addition of fly ash reduces the extent to which the compression strength of concrete is lowered after low-temperature resistance tests by 22–82%. The addition of fly ash in the range of 10–30% causes a slight increase in the water absorption of concrete. Concretes containing the addition of fly ash from biomass combustion do not have a negative environmental impact with respect to the leaching of heavy metal ions into the environment.
Cherenkov Radiation Detection on a LS Counter for 226Ra Determination in Water and Its Comparison with Other Common Methods
Authors: Stojković Ivana , Todorović Nataša , Nikolov Jovana , Radulović Branka , Guida Michele
Published: November 2021

Reliable determination of 226Ra content in drinking water, surface water and groundwater is required for radiological health-risk assessment of populations and radiation-dose calculations after ingestion and inhalation. This study aimed to determine 226Ra presence in the untreated water samples on a liquid scintillation counter via Cherenkov radiation detection. Cherenkov counting is a faster, simpler, less expensive technique than other commonly used methods for 226Ra determination. Step-by-step optimization of this technique on the Quantulus detector is presented in this paper. Improvement of detection limit/efficiency in the presence of sodium salicylate was investigated in this study. The main parameters of the method obtained were detection efficiency 15.87 (24)% and detection limit 0.415 Bq/L achieved for 1000 min of counting in 20 mL of sample volume. When 1 g of sodium salicylate was added, efficiency increased to 38.1 (5)%, with a reduction in the detection limit to 0.248 Bq/L for 500 min of counting. A satisfactory precision level of Cherenkov counting was obtained, the results deviating between 5% and 20% from reference values. The precision and accuracy of the Cherenkov counting technique were compared to liquid scintillation counting (EPA Method 913.0 for radon determination) and gamma spectrometry (the direct method for the untreated water samples on HPGe spectrometer). An overview of the advantages/disadvantages of each technique is elaborated in this paper.
Analytical and Numerical Investigation of an Electrochemical Chloride Barrier for Reinforced Concrete Structures
Authors: Driessen-Ohlenforst Carla , Raupach Michael
Published: November 2021

During the development of a carbon-reinforced mortar interlayer for bridges, the idea of an electrochemical chloride barrier arose. An electrical field is generated between two carbon meshes, and the negatively charged chloride ions are held on the polarized upper carbon mesh to prevent chloride-induced corrosion in the reinforcement. Laboratory tests unexpectedly showed that higher voltages lead to an increase in chloride ions for certain depths of the reference probes. This paper discusses the implementation of analytical and numerical models that finally explain the effect only by the acting diffusion and migration with the help of a finite differences model and finite elements simulations. The effect of the local minimum is limited to positions above the depth of the first carbon layer of the test specimens. It is caused by the lines of the electrical field between the first and second carbon layer. According to the experimental and finite elements simulation results, higher voltages lead to lower chloride concentrations for all positions below the first carbon layer only after sufficient time duration. Therefore, the intended effect of an electrochemical chloride barrier can in general only be observed and confirmed after a certain time depending on position, conditions and parameters.
The Cascade Hilbert-Zero Decomposition: A Novel Method for Peaks Resolution and Its Application to Raman Spectra
Authors: Postnikov Eugene B. , Lebedeva Elena A. , Zyubin Andrey Yu. , Lavrova Anastasia I.
Published: November 2021

Raman spectra of biological objects are sufficiently complex since they are comprised of wide diffusive spectral peaks over a noisy background. This makes the resolution of individual closely positioned components a complicated task. Here we propose a method for constructing an approximation of such systems by a series, respectively, to shifts of the Gaussian functions with different adjustable dispersions. It is based on the coordination of the Gaussian peaks’ location with the zeros of the signal’s Hilbert transform. The resolution of overlapping peaks is achieved by applying this procedure in a hierarchical cascade way, subsequently excluding peaks of each level of decomposition. Both the mathematical rationale for the localization of intervals, where the zero crossing of the Hilbert-transformed uni- and multimodal mixtures of Gaussians occurs, and the step-by-step outline of the numerical algorithm are provided and discussed. As a practical case study, we analyze results of the processing of a complicated Raman spectrum obtained from a strain of Mycobacterium tuberculosis. However, the proposed method can be applied to signals of different origins formed by overlapped localized pulses too.
A Fractional Ordered COVID-19 Model Incorporating Comorbidity and Vaccination
Authors: Das Meghadri , Samanta Guruprasad , De la Sen Manuel
Published: November 2021

The primary goal of this research is to investigate COVID-19 transmission patterns in West Bengal, India in 2021; the first Coronavirus illness (COVID-19) in West Bengal was revealed on 17 March 2020. We employed the modified Susceptible-Asymptomatic-Vaccinated-Comorbidity-Infectious-Recovered (SAVICR) compartmental model as part of fractional orders because of the uncertainty created by the limited Coronavirus (COVID-19) information. In this article, two sub-compartments (Normal Infected and Infected with Co-morbidity) has been considered with vaccinated class, which is relevant in the present situation. We have studied the dynamical analysis of the system and also studied sensitivity of the parameters for West Bengal framework. We have also considered an optimal control problem taking social distancing (non-pharmaceutical treatments) as a control parameter along with vaccination.