bluuebunny/crossref_metadata_2025 huggingface dataset:
Neural Networks That Distinguish Infection Periods of Wheat Tan Spot in an Outdoor Environment
Authors: De Wolf E. D. , Franel L. J.
Published: May 2007

Tan spot of wheat, caused by Pyrenophora tritici-repentis, provided a model system for testing disease forecasts based on an artificial neural network. Infection periods for P. tritici-repentis on susceptible wheat cultivars were identified from a bioassay system that correlated tan spot incidence with crop growth stage and 24-h summaries of environmental data, including temperature, relative humidity, wind speed, wind direction, solar radiation, precipitation, and flat-plate resistance-type wetness sensors. The resulting data set consisted of 97 discrete periods, of which 32 were reserved for validation analysis. Neural networks with zero to nine processing elements were evaluated 20 times each to identify the model that most accurately predicted an infection event. The 200 models averaged 74 to 77% accuracy, depending on the number of processing elements and random initialization of coefficients. The most accurate model had five processing elements and correctly predicted 87% of the infection periods in the validation set. In comparison, stepwise logistic regression correctly predicted 69% of the validation cases, and multivariate discriminant analysis distinguished 50% of the validation cases. When wetness-sensor inputs were withheld from the models, both the neural network and logistic regression models declined 6% in prediction accuracy. Thus, neural networks were more accurate than statistical procedures, both with and without wetness-sensor inputs. These results demonstrate the applicability of neural networks to plant disease forecasting.
Lesion Expansion as an Epidemic Component
Authors: Berger R. D. , Filho A. Bergamin , Amorim L.
Published: May 2007

A simulator for the enlargement of cohorts of circular lesions on cohorts of host tissue was used to examine five epidemiological parameters: radial rate (mm day-1) of lesion expansion, k exp; maximum basic infection rate, R m; proportion of lesion area as infectious, f; initial lesion size (mm2), z; and proportion of susceptible host sites, s. Based on the proportion of disease severity at day 50 and the proportion of the total disease that originated solely from lesion expansion, kexp was the most sensitive of the five parameters. A radial rate of only 0.1 mm day-1 resulted in a proportion of >0.7 of the diseased area that came from lesion expansion. In an extensive survey of phytopathological literature, many plant pathogens had radial rates greater than 0.1 mm day-1, which would result in a proportion of >0.95 of the total disease that comes from lesion expansion. Susceptible host sites, s, was a sensitive parameter, as this determined the host area into which lesions could expand. Naturally, Rm was a sensitive parameter for the proportion of disease on day 50, as it controlled the overall speed of the epidemic. Initial lesion size was a relatively insensitive parameter, although z interacted significantly with s. The greatest proportion of disease that originated from lesion expansion occurred with fast kexp, small z, and low values of s, Rm, and f. The model was validated with lesion numbers and severities obtained in natural epidemics of Cercospora medicaginis on alfalfa and Exserohilum turcicum on maize. We recommend that the ‘epidemic quintuplet’ used to describe polycyclic epidemics be expanded to the ‘epidemic sextuplet’ with the inclusion of kexp, since lesion expansion is a major component of many polycyclic epidemics.
Biological, Serological, and Molecular Variabilities of Clover Yellow Vein Virus
Authors: Sasaya Takahide , Shimizu Tokurou , Nozu Yuzo , Nishiguchi Masamichi , Inouye Narinobu , Koganezawa Hiroki
Published: May 2007

A comparative study was made on the host reactions, serological properties, and nucleotide sequences of the coat protein (CP) gene of 10 clover yellow vein virus (C1YVV) isolates and one bean yellow mosaic virus (BYMV) isolate collected from different host plant species and locations in Japan. Two strains of C1YVV isolates, grouped on the basis of host reactions on Chenopodium amaranticolor, C. quinoa, Nicotianaclevelandii, N. benthamiana, Vicia faba, and Trifolium repens, corresponded to two serotypes determined by double-antibody sandwich- and triple-antibody sandwich-enzyme-linked immunosorbent assay using three polyclonal and nine monoclonal antibodies. These results were also confirmed by nucleotide sequence analysis of the CP gene. The CP gene of C1YVV isolates of strain 1, including the Australian isolate C1YVV-B, had 93 to 98% nucleotide identities and 97 to 99.6% amino acid identities. The CP of C1YVV isolates of strain 2, including the New Zealand isolate C1YVV-NZ, had 92 to 98% nucleotide identities and 95 to 98% amino acid identities. The nucleotide identities and the amino acid identities between the two C1YVV strains were 82 to 84%, and 90 to 94%, respectively. When compared with the CP sequences of 12 C1YVV isolates, the CP sequence of the BYMV isolate had 71 to 73% nucleotide identity and 73 to 77% amino acid identity. Amino acid sequence differences among C1YVV isolates from strains 1 and 2 were located mostly at the N-terminal regions of the CP. Our results indicated that the C1YVV isolates studied could be separated into two strains on the basis of host reactions, serology, and the nucleotide sequence of the CP gene.
A Computer-Controlled Environmental Chamber for the Study of Aerial Fungal Spore Release
Authors: Gottwald T. R. , Trocine T. M. , Timmer L. W.
Published: May 2007

An environmental chamber was designed to study aerial release of spores of ascomycetes and hyphomycetes, based on a device developed by C. M. Leach. Relative humidity (RH), temperature, red (660 nm) and infrared (880 nm) light, leaf wetness, wind speed, vibration, and rain events are controlled and monitored within the chamber via an RTC-HC11 real-time controller and data-acquisition system. A BASIC11 computer program is uploaded to and controls the system. The program requests values for environmental parameters that change through time according to user specifications. The controller interacts with a stepper motor, solenoids, and relay switches via a feedback system based on data received from solid-state RH, temperature, and leaf-wetness sensors. The data-acquisition system records environmental data from the chamber in RAM (random access memory) that can be downloaded to a personal computer for correlation with spore-release data. Spores released from fungal specimens on plant tissues and cultures placed in the chamber and subjected to the desired environmental conditions are collected on a continuous volumetric spore trap at an exhaust port from the chamber. The performance of the device was examined by measuring spore release of Mycosphaerella citri, Alternaria solani, and Venturia inaequalis under various environmental conditions.
Soil Chemical and Physical Properties Associated with Suppression of Take-all of Wheat by Trichoderma koningii
Authors: Duffy Brion K. , Ownley Bonnie H. , Weller David M.
Published: May 2007

Trichoderma koningii, originally isolated from a take-all-suppressive soil in Western Australia, has been shown to protect wheat against take-all disease and increase grain yield in field trials in Australia, China, and the United States. However, within a region, the level of protection provided by T. koningii can dramatically vary between field sites. We evaluated suppression of take-all by this fungus in eight silt loams from the Pacific Northwest of the United States and the influence of 21 abiotic soil parameters on biocontrol activity. While T. koningii significantly increased plant growth and reduced disease severity in all eight silt loams, the level of protection varied significantly among the soils. Disease suppression was not associated with the conduciveness of a soil to take-all, but rather to the supportiveness of a soil to biocontrol activity. Biocontrol activity was positively correlated with iron, nitrate-nitrogen, boron, copper, soluble magnesium, and percent clay, and negatively correlated with soil pH and available phosphorus. Principal component factor analysis using these eight variables resulted in a three-component solution that accounted for 95% of the variation in disease rating. Least squares regression analysis (R2 = 0.992) identified a model that included nitrate-nitrogen, soil pH, copper, and soluble magnesium, and described the variance in take-all suppression by T. koningii. Potential applications of these results include amending soil or inoculants with beneficial factors that may be lacking in the target soil and customizing biocontrol treatments for sites that have parameters predictive of a favorable environment for disease suppression.
Genetic Characterization by RAPD Analysis of Isolates of Fusarium oxysporum f. sp. erythroxyli Associated with an Emerging Epidemic in Peru
Authors: Nelson Amy J. , Elias Karol S. , Arévalo G. E. , Darlington Lee C. , Bailey Bryan A.
Published: May 2007

An epidemic of vascular wilt caused by Fusarium oxysporum f. sp. erythroxyli is currently occurring on Erythroxylum coca var. coca in the coca-growing regions of the Huallaga Valley in Peru. Random amplified polymorphic DNA (RAPD) analysis of isolates of the pathogen was undertaken to elucidate its genetic complexity, as well as to identify a specific DNA fingerprint for the pathogen. Two hundred isolates of Fusarium were collected from 10 coca-growing regions in Peru. Of these, 187 were confirmed to be F. oxysporum, and 143 of the F. oxysporum were shown to be pathogens of coca by a root-dip pathogenicity test. The pathogens could be grouped into two subpopulations based on RAPD analysis, and no polymorphism in RAPD pattern was observed among isolates of either subpopulation. Both subpopulations were present in the central Huallaga Valley, where earliest reports of the epidemic occurred. RAPD analysis could easily distinguish the isolates of F. oxysporum f. sp. erythroxyli from the nonpathogenic isolates of F. oxysporum from E. coca var. coca, indicating its utility in DNA fingerprinting.
Rhizopus Head Rot of Confectionery Sunflower: Effects on Yield Quantity and Quality and Implications for Disease Management
Authors: Shtienberg D.
Published: May 2007

The effects of Rhizopus head rot, caused by Rhizopus oryzae, on the yield of confectionery sunflower and its quality were studied in field experiments conducted from 1994 to 1996. The extent of yield loss was related to the crop growth stage at inoculation. When heads were inoculated at the budding stage, loss was not apparent, because inoculated heads were not infected. When inoculated at the anthesis stage, loss was relatively high (42.5 to 99.1%), and both the number of achenes per head and the individual achene weight were reduced. When heads were inoculated at the seed development stage, yield was not reduced significantly (although the entire receptacle was rotted). Effects of Rhizopus head rot on measures of yield quality were examined as well. Inoculation with R. oryzae did not affect the size of the achenes at any crop growth stage. In contrast, the incidence of discolored achenes (an external sign of nutmeats with a bitter off-flavor) was affected by the disease at all crop growth stages. A survey in eight commercial fields from 1992 to 1996 found that, by the end of the season, incidence of disease ranged from 2.3 to 17.4%. However, since disease intensified late, resultant yield losses were minor and did not exceed 3.1%. Loss figures were estimated by means of a model that was developed and validated in the field experiments. The disease did affect the incidence of discolored achenes. Thus, the conclusion drawn is that the effects of Rhizopus head rot in confectionery sunflower on crop yield is of minimal concern, at least when disease intensifies late, as was the case in the studied fields, but management of the disease should be considered in some situations. The objectives would be to prevent a reduction in yield quality, not yield quantity.
Role of Extracellular Polysaccharide and Endoglucanase in Root Invasion and Colonization of Tomato Plants by Ralstonia solanacearum
Authors: Saile Elke , McGarvey Jeff A. , Schell Mark A. , Denny Timothy P.
Published: May 2007

Ralstonia solanacearum is a soilborne plant pathogen that normally invades hosts through their roots and then systemically colonizes aerial tissues. Previous research using wounded stem infection found that the major factor in causing wilt symptoms was the high-molecular-mass acidic extracellular polysaccharide (EPS I), but the β-1,4-endoglucanase (EG) also contributes to virulence. We investigated the importance of EPS I and EG for invasion and colonization of tomato by infesting soil of 4-week-old potted plants with either a wild-type derivative or genetically well-defined mutants lacking EPS I, EG, or EPS I and EG. Bacteria of all strains were recovered from surface-disinfested roots and hypocotyls as soon as 4 h after inoculation; that bacteria were present internally was confirmed using immunofluorescence microscopy. However, the EPS-minus mutants did not colonize stems as rapidly as the wild type and the EG-minus mutant. Inoculations of wounded petioles also showed that, even though the mutants multiplied as well as the wild type in planta, EPS-minus strains did not spread as well throughout the plant stem. We conclude that poor colonization of stems by EPS-minus strains after petiole inoculation or soil infestation is due to reduced bacterial movement within plant stem tissues.
Improved Detection of Polygalacturonase Activity due toMucor piriformiswith a Modified Dinitrosalicylic Acid Reagent
Authors: Wang Guangyi , Michailides Themis J. , Bostock Richard M.
Published: May 2007

An assay for determination of galacturonic acid with 3,5-dinitrosalicylic acid was developed that substantially extends the linear range of detection compared to a previously published method with this reagent. In the improved assay, galacturonic acid was detected with a reagent containing 44 mM 3,5-dinitrosalicylic acid, 4 mM sodium sulfite, and 375 mM sodium hydroxide. The absorbance of the solution after reaction with galacturonic acid was determined at 575 nm and was linear at concentrations of galacturonic acid up to 50 μmol, with a lower limit of detection at ~400 nmol. The assay with the improved reagent could be performed in wavelength ranges from 550 to 575 nm, with higher sensitivity at the shorter wavelengths. The new reagent was used in routine assays of polygalacturonase activity in culture filtrates of the important postharvest fungal pathogen Mucor piriformis.
Adult Plant Phenotype of theRp1-DJCompound Rust Resistance Gene in Maize
Authors: Hu G. , Webb C. A. , Hulbert S. H.
Published: May 2007

The complex structure of the rp1 rust resistance locus of maize allows two or more resistance genes to be recombined together in coupling phase. The phenotypic effects of the Rp1-DJ compound gene, which carries both Rp1-D and Rp1-J, were analyzed. The Rp1-DJ compound gene was associated with a chlorotic spotting phenotype in some genetic backgrounds. At the seedling stage, lines carrying Rp1-DJ are fully susceptible to Puccinia sorghi biotype HI1, which is virulent on lines with the two genes singly. At later stages of growth, however, Rp1-DJ lines show partial resistance when compared with sibling lines not carrying the compound gene. The Rp1-DJ gene also confers partial resistance to P. polysora in adult plants.
Genetic Variation for Virulence and Resistance in the Wheat-Mycosphaerella graminicola Pathosystem III. Comparative Seedling and Adult Plant Experiments
Authors: Kema Gert H. J. , van Silfhout Cor H.
Published: May 2007

Fourteen Dutch Mycosphaerella graminicola isolates were studied for their virulence to 22 wheat cultivars in the seedling stage in an experiment set up as a completely randomized block design with three repetitions. Isolate × cultivar interactions were highly significant. Cluster analyses were applied to select three isolates with significantly different virulence characteristics for both disease parameters. These were retested in the seedling stage and used to inoculate two field experiments that were planted according to a split plot design in 1992 and 1995. Overhead inoculations were conducted after flowering to avoid the effects of plant height; hence, these experiments were intended as monocyclic tests for virulence differences between the isolates. Significant isolate × cultivar interactions were detected in each experiment, demonstrating specificity in the wheat-M. graminicola pathosystem in the adult plant stage under field conditions. The reproducibility of the adult plant data was high. Genetic differences among the isolates were additionally demonstrated by randomly amplified polymorphic DNA (RAPD) patterns, which also showed that no significant contamination of the inoculated plots with the natural M. graminicola population had occurred. Rank correlations between seedling and adult plant data were significant for M. graminicola isolates IPO323 and IPO290, but not for isolate IPO001. Hence, evaluation of resistance and virulence may require seedling, as well as adult plant, tests.
Evidence of Parasexual Exchange of DNA in the Rice Blast Fungus Challenges Its Exclusive Clonality
Authors: Zeigler R. S. , Scott R. P. , Leung H. , Bordeos A. A. , Kumar J. , Nelson R. J.
Published: May 2007

We applied DNA markers to determine whether parasexual recombination may contribute to the extreme genetic diversity and variability observed in Magnaporthe grisea, the causal agent of rice blast disease. Dispersed repetitive elements and mapped, low-copy restriction fragment length polymorphism (RFLP) probes were used to detect transfers of DNA between cultured isolates of M. grisea. Low-copy RFLP probes also were used to detect putative recombinants among isolates from well-characterized field populations of the pathogen. Microscopic examination of tufted mycelium between cocultured isolates revealed frequent hyphal fusions. Hyphal tips and conidia were recovered without selection from tufted zones in two separate vegetative pairings involving isolates with dissimilar haplotypes, based on the repetitive element MGR586. Haplotypic changes were observed at a higher frequency in tuft derivatives than in subcultures of each isolate alone. From 136 tuft derivatives analyzed, 5 putative recombinant haplotypes were identified. Introgression was demonstrated with two independent repetitive elements, fosbury and MGR586, as probes on DNA digested with several restriction enzymes. Introgressions were characterized by addition of 1 to 10 MGR586 bands, and 1 to 3 fosbury bands from one parent into the background of the other. Polymorphic single-copy probes were used to analyze putative recombinants. One probe detected an introgression event as predicted by analysis with MGR586. To assess the possible role of parasexual recombination in field populations of the pathogen, isolates in the Philippines previously grouped based on DNA fingerprinting were analyzed with low-copy RFLP markers. Polymorphism in single-copy loci typically was seen between, but not within, putative pathogen lineages. One lineage (designated lineage 4), however, was polymorphic for several probes. For some isolates, alleles at these loci comigrated with alleles characteristic of other lineages, suggesting the transfer of DNA fragments between lineages. One isolate was apparently a merodiploid, carrying an allele typical of lineage 4 plus another allele characteristic of a different lineage. In a survey of isolates from the Indian Himalayas, a merodiploid also was found with single- or low-copy probes. Examination of MGR586 profiles of the putative recombinant and its putative donor strains showed the expected introgression of MGR586 bands. The detection of parasexual DNA exchanges in wild-type strains under unselected conditions and the existence of merodiploids in nature suggest that parasexual recombination occurs in field populations of M. grisea. This raises questions concerning exclusive clonality in the blast fungus.
Monoclonal Antibodies Detect a Single Amino Acid Difference Between the Coat Proteins of Soilborne Wheat Mosaic Virus Isolates: Implications for Virus Structure
Authors: Chen Jianping , Torrance Lesley , Cowan Graham H. , MacFarlane Stuart A. , Stubbs Gerald , Wilson T. Michael A.
Published: May 2007

Four monoclonal antibodies (MAbs) were prepared against an isolate of soilborne wheat mosaic furovirus from Oklahoma (SBWMV Okl-7). Three MAbs had different reactivities in tests on SBWMV isolates from Nebraska (Lab1), France, and Japan. One MAb (SCR 133) also reacted with oat golden stripe furovirus. None of the MAbs cross-reacted with other rod-shaped viruses including beet necrotic yellow vein furovirus, potato mop-top furovirus, and tobacco rattle tobravirus. Sequence analysis of nucleotides between 334 and 1,000 of RNA 2, the region that encodes the coat protein (CP) and the first 44 amino acids of a readthrough protein, of the four SBWMV isolates revealed up to 27 base changes from the published sequence of a Nebraska field isolate of SBWMV. Most changes were translationally silent, but some caused differences of one to three amino acids in residues located near either the N- or C-terminus of the CPs of the different isolates. Two further single amino acid changes were found at the beginning of the readthrough domain of the CP-readthrough protein. Some of these amino acid changes could be discriminated by MAbs SCR 132, SCR 133, and SCR 134. Peptide scanning (Pepscan) analysis indicated that the epitope recognized by SCR 134 is located near the N-terminus of the CP. SCR 132 was deduced to react with a discontinuous CP epitope near the C-terminus, and SCR 133 reacted with a surface-located continuous epitope also near the C-terminus. Predictions of CP structure from computer-assisted three-dimensional model building, by comparison with the X-ray fiber diffraction structure of tobacco mosaic virus, suggested that the three CP amino acids found to differ between isolates of SBWMV were located near the viral surface and were in regions predicted to be antigenic.
Spatial Patterns of Microsclerotia ofVerticillium dahliaein Soil and Verticillium Wilt of Cauliflower
Authors: Xiao C. L. , Hao J. J. , Subbarao K. V.
Published: May 2007

The spatial patterns of microsclerotia of Verticillium dahliae in soil and wilt symptoms on cauliflower were determined at three sites in each of two fields in 1994 and 1995. Each site was an 8 × 8 grid divided into 64 contiguous quadrats (2 by 2 m each). Soil samples were collected to a depth of 15 cm with a probe (2.5 cm in diameter), and samples from four sites in each quadrat were bulked. Plants in each quadrat were cut transversely, and the number of plants with vascular discoloration and the number without discoloration were recorded. The soil was assayed for microsclerotia by the modified Anderson sampler technique. Lloyd's index of patchiness (LIP) was used as an indicator to evaluate the aggregation of microsclerotia in the field. Spatial autocorrelation and geostatistical analyses were also used to assess the autocorrelation of microsclerotia among quadrats. The LIP for microsclerotia was greater than 1, indicating aggregation of propagules; however, the degree of aggregation at most sites was not high. Significant autocorrelation within or across rows was detected in some spatial autocorrelograms of propagules, and anisotropic patterns were also detected in some oriented semivariograms from geostatistical analyses for microsclerotia, indicating the influence of bed preparation in the fields on pathogen distribution. The parameter estimates p and θ in the beta-binomial distribution and the index of dispersion (D) associated with the distribution were used to assess the aggregation of diseased plants at each site. A random pattern of wilt incidence was detected at 7 of 12 sites, and an aggregated pattern was detected at 5 of 12 sites. The degree of aggregation was not high. A regular pattern of wilt severity was detected at all sites. The high disease incidence (77 to 98%) observed at 11 of the 12 sites could be explained by high inoculum density.
Purification and Properties of a New Virus from Black Currant, Its Affinities with Nepoviruses, and Its Close Association with Black Currant Reversion Disease
Authors: Lemmetty A. , Latvala S. , Jones A. T. , Susi P. , McGavin W. J. , Lehto K.
Published: May 2007

Black currant reversion is a virus-like disease whose causal agent has not been identified. In rooted cuttings of a black currant plant affected with the severe form of the disease, pronounced chlorotic line patterns and ringspots developed in newly emerging leaves. From such symptom-bearing leaves, a virus was mechanically transmitted with difficulty to Chenopodium quinoa and, from this host, to other herbaceous test plants. The virus was purified and partially characterized, and the purified viri-ons were used for antiserum production. Virus particles were isometric, approximately 27 nm in diameter, and sedimented as two nucleoprotein components. They contained a protein species with a molecular mass of 55 kDa, which was readily degraded into a 54-kDa protein and two major RNA components of about 6,700 and 7,700 nucleotides (nt), each with a poly(A) tail. Most of these properties are shared by nepoviruses, but the virus was serologically unrelated to 14 nepoviruses or putative nepovi-ruses tested. However, the deduced sequence of 1,260 nt at the 3′ end of one of the viral RNA species was distinct from any known viral sequence, except that it contained short regions of homology to the 3′ terminal sequences of RNAs of seven other nepoviruses and two comovi-ruses. To detect this virus in Ribes plants, primers were designed from the known sequence to amplify a 210-nt region of the cDNA of the virus RNA using an immunocapture reverse transcriptase polymerase chain reaction (IC-RT-PCR) protocol. Using this assay for the virus, we associated its presence with two recognized forms of black currant reversion disease occurring in Finland, Scotland, or New Zealand. We also detected the virus in vector gall mites from reverted plants and in black currant plants on which such vector mites had fed. However, the virus was not detected by IC-RT-PCR in known healthy Ribes plants; in Ribes plants free from reversion, but affected by three other distinct virus-like diseases of Ribes; or in plants infected with arabis mosaic, strawberry latent ringspot, or raspberry ringspot nepoviruses. These data suggest that this virus may be the causal agent of reversion disease, and it is tentatively called black currant reversion associated virus.
Head Blight Gradients Caused by Gibberella zeae from Area Sources of Inoculum in Wheat Field Plots
Authors: Fernando W. G. D. , Paulitz T. C. , Seaman W. L. , Dutilleul P. , Miller J. D.
Published: May 2007

The spread of Fusarium head blight of wheat from a small area inoculum source was examined in wheat plots (100, 625, or 2,500 m2) inoculated in the center with Gibberella zeae-colonized corn kernels or macro-conidia sprayed on heads at anthesis. With the first inoculation method, disease foci were produced from ascospores released from perithecia formed on inoculated kernels. With the second inoculation method, disease foci were produced by macroconidia directly applied to the heads. Some plots were misted during anthesis. Plots were divided into grids, and disease incidence on spikelets and seeds was assessed at the grid intersections. Isopath contour maps were constructed using an interpolation procedure based on a weighted least squares method. Disease gradients were constructed from the isopath contours in the direction parallel to average nightly wind vectors using an exponential model. This study was conducted over a 3-year period at two sites: one in Quebec and one in Ontario. Both inoculation methods resulted in a discrete, primary focus of head blight in each plot, with one or two smaller secondary foci in some plots. The highest incidence of disease on spikelets or seed was commonly displaced somewhat from the inoculum source, usually downwind. The gradient slopes of seed and spikelet infection ranged from −0.10 to −0.43 m−1 in plots with ascospore inoculum and from −0.48 to −0.79 m−1 in plots inoculated with macroconidia. Seed infection declined to 10% of the maximum within 5 to 22 m from the focal center in asco-spore-inoculated plots, and within 5 m in a macroconidia-inoculated plot. Gradients were usually steeper upwind compared with downwind of the inoculum source. In misted plots, incidence of disease was higher and more diffuse than in nonirrigated plots. Based on gradients and dispersal patterns, disease foci in plots inoculated with G. zeae-colonized corn kernels probably arose from airborne ascospores rather than from splash-borne macroconidia and were the result of infection events that occurred over a short period of time. Comparison of conidial- and ascospore-derived disease gradients indicated a lack of secondary infection, confirming that Fusarium head blight is primarily a monocyclic disease.
Sphaeropsis sapineaand Water Stress in a Red Pine Plantation in Central Wisconsin
Authors: Blodgett J. T. , Kruger E. L. , Stanosz G. R.
Published: May 2007

A study was conducted to determine the effects of water stress resulting from competing vegetation on disease development of Sphaeropsis sapinea in red pine plantations. A 9-year-old plantation was selected in 1992 and experiments were conducted for three consecutive years. Four treatments were assigned at random to individual trees: no treatment, herbicide to kill surrounding weeds, supplemental water, and both herbicide and supplemental water. Two isolates of each S. sapinea morphotype (A and B) were used to inoculate wounded lateral shoots. Disease development was measured as the maximum distance below the inoculation site at which necrotic needles were observed. Nonwatered trees with competing vegetation (nontreated condition) had significantly lower predawn needle water potentials (more water stress) and more severe disease development than trees that received the herbicide, water, or combined herbicide and water treatments. The most severe disease occurred in the driest year and the least in the wettest year. Competing vegetation indirectly affected disease development by inducing water stress, even in relatively moist years, on trees previously considered well established. Isolates of morphotype A were more aggressive than isolates of morphotype B. Conclusions from this research have implications for sustainable management of the region's conifer forests.
Synergism of Pratylenchus penetrans and Verticillium dahliae Manifested by Reduced Gas Exchange in Potato
Authors: Saeed Ibrahim A. M. , MacGuidwin Ann E. , Rouse Douglas I.
Published: May 2007

The effects of solitary and concurrent infection by Pratylenchus pene-trans and Verticillium dahliae on gas exchange of Russet Burbank potato (Solanum tuberosum) were studied in growth chamber experiments. Treatments were P. penetrans at low, medium, and high density; V. dahliae alone at one initial density; the combination of the nematode at these three densities and V. dahliae; and a noninfested control. Gas exchange parameters of leaf cohorts of different ages in the different treatments were repeatedly measured with a Li-Cor LI-6200 portable photosynthesis system. At 45 days after planting, joint infection significantly reduced net photosynthesis, stomatal conductance, and transpiration of 1- to 25-day-old leaf cohorts. Intercellular CO2 levels were significantly increased by co-infection, especially in older leaves. The synergistic effect of co-infection on gas exchange parameters was greater in the oldest cohort than in the youngest cohort. No consistent effects on leaf gas exchange parameters were observed in plants infected by the nematode or the fungus alone. The relationship between the assimilation rate and stomatal conductance remained linear regardless of solitary or concomitant infection, indicating that stomatal factors are primarily responsible for regulating photosynthesis. The significant reduction of gas exchange in leaves of co-infected plants without reduction in intercellular CO2 concentrations suggests that nonstomatal factors also play a role when both organisms are present.
Disease Progress Based on Effects of Verticillium dahliae and Pratylenchus penetrans on Gas Exchange in Russet Burbank Potato
Authors: Saeed Ibrahim A. M. , MacGuidwin Ann E. , Rouse Douglas I.
Published: May 2007

The interactive effects of concomitant infection by the nematode Pratylenchus penetrans and the fungus Verticillium dahliae on symptom expression in Russet Burbank potato was studied in growth chamber experiments. Treatments were P. penetrans at three initial densities, V. dahliae at one inoculum density, the combination of the nematode at these three densities and the fungus, and a noninfested control. Gas exchange was measured nondestructively in leaf cohorts of different ages, one to three times weekly, with a LI-COR portable photosynthesis system. The single-pathogen treatments had no effect on assimilation or transpiration rates, but joint infection had a significant impact. In concomitant infection, photosynthesis was impaired more than transpiration, so estimates of leaf health were based on carbon assimilation rates only. Reductions in assimilation rate were apparent before the onset of visual symptoms. Assimilation rates decreased as much as 44% in the top, and newest, leaves of concomitantly infected plants, compared to rates in control plants. Even so, the health of newly produced leaves did not become progressively worse through time. With light use efficiency less than 0.20 mol of CO2 fixed per mol of photosynthetically active radiation used as the criterion for disease incidence, disease progressed acropetally from the oldest to the youngest leaves. In plants infected with P. penetrans (0.8 nematodes per cm3 of soil) in combination with V. dahliae, all leaves in cohorts 1 and 2 were symptomatic by 45 days after planting, and leaves in cohorts 3 to 6 became symptomatic at weekly intervals thereafter. For the control and single-pathogen treatments, the first time that light use efficiency fell below 0.20 in all leaves in cohort 1 was 71 days after planting. Concomitant infection reduced leaf life span by about 3 weeks. Both visual and physiological symptom expression were invariant to differences in initial nematode inoculum densities ranging from 0.8 to 2.5 nematodes per cm3 of soil in one experiment and from 1.3 to 4.1 nematodes per cm3 of soil in a second experiment.
Expression of an Engineered Cecropin Gene Cassette in Transgenic Tobacco Plants Confers Disease Resistance to Pseudomonas syringae pv. tabaci
Authors: Huang Y. , Nordeen R. O. , Di M. , Owens L. D. , McBeath J. H.
Published: May 2007

A chimeric gene fusion cassette, consisting of a secretory sequence from barley α-amylase joined to a modified cecropin (MB39) coding sequence and placed under control of the promoter and terminator from the potato proteinase inhibitor II (PiII) gene, was introduced into tobacco by Agrobacterium-mediated transformation. Transgenic and control plants reacted differently when inoculated with tobacco wildfire pathogen Pseudomonas syringae pv. tabaci at various cell concentrations. With control plants (transformed with a PiII-GUS [β-D-glucuronidase] gene fusion), necrosis was clearly visible in leaf tissue infiltrated with bacterial inoculum levels of 102, 103, 104, 105, and 106 CFU/ml. With MB39-transgenic plants, however, necrosis was observed only in the areas infiltrated with the two highest levels (105 and 106 CFU/ml). No necrosis was evident in areas infiltrated with bacterial concentrations of 104 CFU/ml or less. Bacterial multiplication in leaves of MB39-transgenic plants was suppressed more than 10-fold compared to control plants, and absence of disease symptom development was associated with this growth suppression. We conclude that the pathogen-induced promoter and the secretory sequence were competent elements for transforming a cecropin gene into an effective disease-control gene for plants.
Calcium Interference with Zoospore Biology and Infectivity of Phytophthora parasitica in Nutrient Irrigation Solutions
Authors: von Broembsen Sharon L. , Deacon J. W.
Published: May 2007

Calcium, applied as either CaCl2 or Ca(NO3)2 to water or calcium-free soluble fertilizer solution (Peters 20-10-20 Peat Lite Special), affected several important stages of Phytophthora parasitica zoospore behavior relevant to infection and disease spread. Release of zoospores from sporangia was suppressed by Ca2+ concentrations in the range of 10 to 50 meq. These concentrations also curtailed zoospore motility; 20 meq of Ca2+ in fertilizer solution caused all zoospores to encyst within 4 h, whereas 94% of zoospores remained motile in unamended solution. In addition, Ca2+ in the range of 10 to 30 meq stimulated zoospore cysts to germinate in the absence of an organic nutrient trigger, while suppressing the release of a single zoospore (diplanetism) from cysts that did not germinate. In growth chamber experiments, the amendment of the fertilizer solution with 10 or 20 mM Ca(NO3)2 greatly suppressed infection of flood-irrigated, containerized vinca seedlings in a peat-based mix by motile or encysted zoospores of P. parasitica. These results demonstrate that Ca2+ amendments interfere with P. parasitica zoospore biology at multiple stages, with compounding effects on epidemiology, and suggest that manipulation of Ca2+ levels in irrigation water or fertilizer solutions could contribute to management of Phytophthora in recirculating irrigation systems.
Comparison of Kernel Wax from Corn Genotypes Resistant or Susceptible to Aspergillus flavus
Authors: Russin J. S. , Guo B. Z. , Tubajika K. M. , Brown R. L. , Cleveland T. E. , Widstrom N. W.
Published: May 2007

Russin, J. S., Guo, B. Z., Tubajika, K. M., Brown, R. L., Cleveland, T. E., and Widstrom, N. W. 1997. Comparison of kernel wax from corn genotypes resistant or susceptible to Aspergillus flavus. Phytopathology 87: 529-533.Kernels of corn genotype GT-MAS: gk are resistant to Aspergillus flavus. Earlier studies showed that this resistance is due in part to kernel pericarp wax. Experiments were conducted to compare wax from GTMAS: gk kernels with that from kernels of several susceptible commercial hybrids. GT-MAS: gk had more pericarp wax than did the susceptible hybrids. Scanning electron microscopy revealed that GT-MAS: gk kernels appeared rough and showed abundant wax deposits on kernel surfaces. Susceptible kernels appeared much more smooth and lacked the abundant surface deposits observed in GT-MAS: gk. In vitro bioassays showed that kernel wax from GT-MAS: gk reduced A. flavus colony diameter by 35%. Colony diameters on a medium amended with wax from susceptible kernels did not differ from those of controls. Thin-layer chromatography and analyses of chromatograms using NIH Image software showed a distinctive composition for GT-MAS: gk kernel wax. Chromatograms of wax from GT-MAS: gk contained a peak unique to this genotype, but also lacked a peak common to all susceptible hybrids. This is the first report of specific kernel factors involved in resistance to A. flavus in corn.
Bacillus sp. L324-92 for Biological Control of Three Root Diseases of Wheat Grown with Reduced Tillage
Authors: Kim Dal-Soo , Cook R. James , Weller David M.
Published: May 2007

Strain L324-92 is a novel Bacillus sp. with biological activity against three root diseases of wheat, namely take-all caused by Gaeumannomyces graminis var. tritici, Rhizoctonia root rot caused by Rhizoctonia solani AG8, and Pythium root rot caused mainly by Pythium irregulare and P. ultimum, that exhibits broad-spectrum inhibitory activity and grows at temperatures from 4 to 40°C. These three root diseases are major yieldlimiting factors for wheat in the U.S. Inland Pacific Northwest, especially wheat direct-drilled into the residue of a previous cereal crop. Strain L324-92 was selected from among approximately 2,000 rhizosphere/rhizoplane isolates of Bacillus species isolated from roots of wheat collected from two eastern Washington wheat fields that had long histories of wheat. Roots were washed, heat-treated (80°C for 30 min), macerated, and dilution-plated on 1/10-strength tryptic soy agar. Strain L324-92 inhibited all isolates of G. graminis var. tritici, Rhizoctonia species and anastomosis groups, and Pythium species tested on agar at 15°C; provided significant suppression of all three root diseases at 15°C in growth chamber assays; controlled either Rhizoctonia root rot, takeall, or both; and increased yields in field tests in which one or more of the three root diseases of wheats were yield-limiting factors. The ability of L324-92 to grow at 4°C probably contributes to its biocontrol activity on direct-drilled winter and spring wheat because, under Inland Northwest conditions, leaving harvest residues of the previous crop on the soil surface keeps soils cooler compared with tilled soils. These results suggest that Bacillus species with desired traits for biological control of wheat root diseases are present within the community of wheat rhizosphere microorganisms and can be recovered by protocols developed earlier for isolation of fluorescent Pseudomonas species effective against take-all.
Population Dynamics of Bacillus sp. L324-92R12 and Pseudomonas fluorescens 2-79RN10 in the Rhizosphere of Wheat
Authors: Kim Dal-Soo , Weller David M. , Cook R. James
Published: May 2007

Bacillus sp. L324-92 is suppressive to three root diseases of wheat, namely take-all caused by Gaeumannomyces graminis var. tritici, Rhizoctonia root rot caused by Rhizoctonia solani AG8, and Pythium root rot caused by several Pythium species. Populations of strain L324-92R12, a rifampicin-resistant mutant of L324-92 applied as a seed treatment, were monitored in the rhizosphere and spermosphere of wheat and compared with populations of Pseudomonas fluorescens 2-79RN10, a known, rhizosphere-competent, biocontrol agent. In growth chamber studies, the population sizes of L324-92R12 on roots of wheat were approximately 1,000-fold smaller than those of 2-79RN10 at 5 days after planting, but, thereafter, they increased while those of 2-79RN10 decreased until the two were equal in size at 45 days after planting. In the field with winter wheat, the population sizes of L324-92R12 on roots were at least 10-fold smaller than those of 2-79RN10 during the fall (November 1993) and early spring (March 1994). Thereafter, the population of L324-92R12 remained constant or increased slightly, while the population of 2-79RN10 decreased until the two were roughly the same at 104 to 105 CFU/plant over the period of 150 days (April 1994) until 285 days (harvest) after planting. In growth chamber studies, strain L324-92R12 remained confined to root sections within 3.5 cm below the seed, whereas 2-79RN10 was recovered from all root sections ranging from 0.5 to 6.5 cm below the seed. In the field on winter wheat, both strains were recovered from root sections down to 5.0 to 6.5 cm below the seed at 75 days after planting (mid December), but only 2-79RN10 was recovered at this depth at 90 days after planting. Both strains were recovered from the seed remnants 6 months after planting in the field. Both strains also were recovered from inside the roots and shoots, but population sizes of strain 279RN10 were greater than those of L324 92R12.
The Influence of Temperature and Light on Defoliation Levels of Elm by Dutch Elm Disease
Authors: Sutherland M. L. , Pearson S. , Brasier C. M.
Published: May 2007

The amount of defoliation of elm (Ulmus procera) caused by three Ophiostoma novoulmi Eurasian race isolates over 14 seasons of field trials was found to be strongly correlated with mean air temperature and mean number of sunshine hours over the 12-week period from inoculation to assessment, and with tree age. The coefficient of determination for the regression of percent defoliation on the environmental and tree factors was 0.76, P < 0.001 (33 df). Levels of defoliation were greatest when mean air temperatures exceeded 17°C with moderate light (5 to 7 h of sunshine), and lowest under conditions of either high light (>7.5 h of sunshine) at all air temperatures or low light (<4.5 h of sunshine) and air temperatures of less than 15.5°C. The model varied in its intercept for the three isolates, reflecting their different levels of aggressiveness. The role of environmental factors in the development of Dutch elm disease symptoms and the implications for elm resistance breeding are discussed.
Quantitation Over Time of Tomato Yellow Leaf Curl Geminivirus DNA in Its Whitefly Vector
Authors: Caciagli P. , Bosco D.
Published: May 2007

The amount of tomato yellow leaf curl geminivirus (TYLCV) DNA that accumulated in the vector Bemisia tabaci was studied by quantitative chemiluminescent dot-blot assay, using digoxigenin-labeled specific DNA probes. Large groups of female whiteflies were allowed to feed for 4, 12, 24, or 48 h on TYLCV-infected tomato plants and then were transferred to TYLCV-immune cucumber plants. Insects were sampled at different times during and after acquisition access and tested for TYLCV-DNA content. TYLCV-DNA assays were done either on whole insects oron the head plus prothorax (to include salivary glands) and abdomen separately. The maximum amount of TYLCV DNA, averaging from 0.5 to 1.6 ng per insect, was always attained at the end of the acquisition period. The mean amount then decreased by about 1 to 2% per day, remaining clearly detectable up to 20 days after the end of the acquisition period. Only some whiteflies that were TYLCV-positive in the abdomen were positive for head plus prothorax. In both parts of the body, TYLCV DNA remained detectable up to 18 days after the end of the acquisition period, showing that TYLCV DNA remains in insect tissues much longer than infectivity indicates.
Antibiosis and Antagonism of Sclerotinia homoeocarpa and Drechslera poae by Pseudomonas fluorescens Pf-5 In Vitro and In Planta
Authors: Rodriguez Fanny , Pfender William F.
Published: May 2007

Pseudomonas fluorescens strain Pf-5, which produces several antifun-gal metabolites, including the antibiotics pyoluteorin, pyrrolnitrin, and 2,4-diacetylphloroglucinol, was tested for its ability to inhibit Sclerotinia homoeocarpa (causal agent of dollar spot) and Drechslerapoae (causal agent of ‘melting-out’) in vitro and in turfgrass; Tn5 mutants with altered antibiotic production also were tested. Inhibition in vitro differed with the medium used, but both fungi generally were inhibited by Pf-5. In most cases, a mutant deficient in pyoluteorin but not pyrrolnitrin or 2,4-di-acetylphloroglucinol was as inhibitory as Pf-5, whereas a pyrrolnitrin-deficient mutant was less inhibitory than Pf-5 in most fungus/medium combinations. High-performance liquid chromatography analysis of culture extracts showed that bacterial genotype and nutrition have an interactive effect on antibiotic production, such that conditions causing an increase in one antibiotic may increase or decrease another. The purported deficiencies for the pyrrolnitrin- and pyoluteorin-deficient mutants were confirmed. In S. homoeocarpa-infested grass clippings incubated in a moist chamber, Pf-5 reduced mycelial growth, whereas the pyrrolnitrin-deficient mutant did not and the pyoluteorin-deficient mutant was intermediate. In greenhouse experiments, Pf-5 reduced dollar spot disease incidence in bentgrass and bluegrass when sprayed over inoculated turf. In grass clippings infested with D. poae and incubated in a moist chamber under favorable conditions for spore production, Pf-5 did not reduce significantly the number of spores produced compared with the non-treated control. However, Pf-5 reduced melting-out disease incidence and severity in bluegrass inoculated with spores of D. poae under greenhouse conditions.