bluuebunny/crossref_metadata_2025 huggingface dataset:
Design of Parallel Air-Cooled Battery Thermal Management System through Numerical Study
Authors: Chen Kai , Li Zeyu , Chen Yiming , Long Shuming , Hou Junsheng , Song Mengxuan , Wang Shuangfeng
Published: October 2017

In electric vehicles, the battery pack is one of the most important components that strongly influence the system performance. The battery thermal management system (BTMS) is critical to remove the heat generated by the battery pack, which guarantees the appropriate working temperature for the battery pack. Air cooling is one of the most commonly-used solutions among various battery thermal management technologies. In this paper, the cooling performance of the parallel air-cooled BTMS is improved through choosing appropriate system parameters. The flow field and the temperature field of the system are calculated using the computational fluid dynamics method. Typical numerical cases are introduced to study the influences of the operation parameters and the structure parameters on the performance of the BTMS. The operation parameters include the discharge rate of the battery pack, the inlet air temperature and the inlet airflow rate. The structure parameters include the cell spacing and the angles of the divergence plenum and the convergence plenum. The results show that the temperature rise and the temperature difference of the batter pack are not affected by the inlet air flow temperature and are increased as the discharge rate increases. Increasing the inlet airflow rate can reduce the maximum temperature, but meanwhile significantly increase the power consumption for driving the airflow. Adopting smaller cell spacing can reduce the temperature and the temperature difference of the battery pack, but it consumes much more power. Designing the angles of the divergence plenum and the convergence plenum is an effective way to improve the performance of the BTMS without occupying more system volume. An optimization strategy is used to obtain the optimal values of the plenum angles. For the numerical cases with fixed power consumption, the maximum temperature and the maximum temperature difference at the end of the five-current discharge process for the optimized BTMS are respectively reduced by 2.1 K and 4.3 K, compared to the original system.
Flat Optical Fiber Daylighting System with Lateral Displacement Sun-Tracking Mechanism for Indoor Lighting
Authors: Vu Ngoc Hai , Shin Seoyong
Published: October 2017

An essential impact which can improve the indoor environment and save on power consumption for artificial lighting is utilization of daylight. Optical fiber daylighting technology offers a way to use direct daylight for remote spaces in a building. However, the existing paradigm based on the precise orientation of sunlight concentrator toward the Sun is very costly and difficult to install on the roof of buildings. Here, we explore an alternative approach using mirror-coated lens array and planar waveguide to develop a flat optical fiber daylighting system (optical fiber daylighting panel) with lateral displacement Sun-tracking mechanism. Sunlight collected and reflected by each mirror-coated lens in a rectangular lens array is coupled into a planar waveguide using cone prisms placed at each lens focus. This geometry yields a thin, flat profile for Sunlight concentrator. Our proposed concentrating panel can be achieved with 35 mm thickness while the concentrator’s width and length are 500 mm × 500 mm. The commercial optical simulation tool (LightToolsTM) was used to develop the simulation models and analyze the system performance. Simulation results based on the designed system demonstrated an optical efficiency of 51.4% at a concentration ratio of 125. The system can support utilizing a lateral displacement Sun-tracking system, which allows for replacing bulky and robust conventional rotational Sun-tracking systems. This study shows a feasibility of a compact and inexpensive optical fiber daylighting system to be installed on the roof of buildings.
In the Dark Shadow of the Supercycle Tailings Failure Risk & Public Liability Reach All Time Highs
Authors: Bowker Lindsay , Chambers David
Published: October 2017

This is the third in a series of independent research papers attempting to improve the quality of descriptive data and analysis of tailings facility failures globally focusing on the relative occurrence, severity and root causes of these failures. This paper updates previously published failures data through 2010 with both additional data pre-2010 and additional data 2010–2015. All three papers have explored the connection between high public consequence failure trends and mining economics trends especially grade, costs to produce and price. This work, the third paper, looks more deeply at that connection through several autopsies of the dysfunctional economics of the period 2000–2010 in which the greatest and longest price increase in recorded history co-occurred across all commodities, a phenomenon sometimes called a supercycle. That high severity failures reached all-time highs in the same decade as prices rose to highs, unprecedented since 1916, challenges many fundamental beliefs and assumptions that have governed modern mining operations, investment decisions, and regulation. It is from waste management in mining, a non-revenue producing cost incurring part of every operation, that virtually all severe environmental and community damages arise. These damages are now more frequently at a scale and of a nature that is non-remediable and beyond any possibility of clean up or reclamation. The authors have jointly undertaken this work in the public interest without funding from the mining industry, regulators, non-governmental organizations, or from any other source.
Countering Negative Effects of Terrain Slope on Airborne Laser Scanner Data Using Procrustean Transformation and Histogram Matching
Authors: Hansen Endre , Ene Liviu , Gobakken Terje , Ørka Hans , Bollandsås Ole , Næsset Erik
Published: October 2017

Forest attributes such as tree heights, diameter distribution, volumes, and biomass can be modeled utilizing the relationship between remotely sensed metrics as predictor variables, and measurements of forest attributes on the ground. The quality of the models relies on the actual relationship between the forest attributes and the remotely sensed metrics. The processing of airborne laser scanning (ALS) point clouds acquired under heterogeneous terrain conditions introduces a distortion of the three-dimensional shape and structure of the ALS data for tree crowns and thus errors in the derived metrics. In the present study, Procrustean transformation and histogram matching were proposed as a means of countering the distortion of the ALS data. The transformations were tested on a dataset consisting of 192 field plots of 250 m2 in size located on a gradient from gentle to steep terrain slopes in western Norway. Regression models with predictor variables derived from (1) Procrustean transformed- and (2) histogram matched point clouds were compared to models with variables derived from untransformed point clouds. Models for timber volume, basal area, dominant height, Lorey’s mean height, basal area weighted mean diameter, and number of stems were assessed. The results indicate that both (1) Procrustean transformation and (2) histogram matching can be used to counter crown distortion in ALS point clouds. Furthermore, both techniques are simple and can easily be implemented in the traditional processing chain of ALS metrics extraction.
Assessing Pine Processionary Moth Defoliation Using Unmanned Aerial Systems
Authors: Cardil Adrián , Vepakomma Udayalakshmi , Brotons Lluis
Published: October 2017

Pine processionary moth (PPM) is one of the most destructive insect defoliators in the Mediterranean for many conifers, causing losses of growth, vitality and eventually the death of trees during outbreaks. There is a growing need for cost-effective monitoring of the temporal and spatial impacts of PPM in forest ecology to better assess outbreak spread patterns and provide guidance on the development of measures targeting the negative impacts of the species on forests, industry and human health. Remote sensing technology mounted on unmanned aerial systems (UASs) with high-resolution image processing has been proposed to assess insect outbreak impacts at local and forest stand levels. Here, we used UAS-acquired RGB imagery in two pine sites to quantify defoliation at the tree-level and to verify the accuracy of the estimates. Our results allowed the identification of healthy, infested and completely defoliated trees and suggested that pine defoliation estimates using UASs are robust and allow high-accuracy (79%) field-based infestation indexes to be derived that are comparable to those used by forest technicians. When compared to current field-based methods, our approach provides PPM impact assessments with an efficient data acquisition method in terms of time and staff, allowing the quantitative estimation of defoliation at tree-level scale. Furthermore, our method could be expanded to a number of situations and scaled up in combination with satellite remote sensing imagery or citizen science approaches.
Dynamics of Coarse Woody Debris Characteristics in the Qinling Mountain Forests in China
Authors: Yuan Jie , Jose Shibu , Zheng Xiaofeng , Cheng Fei , Hou Lin , Li Jingxia , Zhang Shuoxin
Published: October 2017

Coarse woody debris (CWD) is an essential component in defining the structure and function of forest ecosystems. Long-term dynamics of CWD characteristics not only affect the release rates of chemical elements from CWD, but also the species diversity of inhabiting plants, animals, insects, and microorganisms as well as the overall health of ecosystems. However, few quantitative studies have been done on the long-term dynamics of CWD characteristics in forest ecosystems in China. In this study, we conducted nine tree censuses between 1996 and 2016 at the Huoditang Experimental Forest in the Qinling Mountains of China. We quantified forest biomass including CWD and CWD characteristics such as decay states and diameter classes during this period and correlated with stand, site, and climatic variables. The forest biomass was dominated by live tree biomass (88%); followed by CWD mass (6%–10%). Understory biomass contributed only a small portion (1%–4%) of the overall biomass. Significant differences in average annual increment of CWD mass were found among forest stands of different species (p < 0.0001). Forest biomass, stand age, forest type, aspect, slope, stand density, annual average temperature, and precipitation were all significantly correlated with CWD mass (p < 0.05), with forest type exhibiting the strongest correlation (r2 = 0.8256). Over time, the annual mass of different CWD characteristics increased linearly from 1996–2016 across all forest types. Our study revealed that forest biomass, including CWD characteristics, varied by forest type. Stand and site characteristics (forest biomass, forest type, aspect, slope and stand density) along with temperature and precipitation played a major role in the dynamics of CWD in the studied forest ecosystems.
Representations of Political Power Structures by Strategically Stable Game Forms: A Survey
Authors: Peleg Bezalel , Holzman Ron
Published: October 2017

We survey the results on representations of committees and constitutions by game forms that possess some kind of equilibrium strategies for each profile of preferences of the players. The survey is restricted to discrete models, that is, we deal with finitely many players and alternatives. No prior knowledge of social choice is assumed: As far as definitions are concerned, the paper is self-contained. Section 2 supplies the necessary general tools for the rest of the paper. Each definition is followed by a simple (but nontrivial) example. In Section 3 we give a complete account of representations of committees (proper and monotonic simple games), by exactly and strongly consistent social choice functions. We start with Peleg’s representations of weak games, and then provide a complete and detailed account of Holzman’s solution of the representation problem for simple games without veto players. In Section 4 we deal with representations of constitutions by game forms. Following Gärdenfors we model a constitution by a monotonic and superadditive effectivity function. We fully characterize the representations for three kinds of equilibrium: Nash equilibrium; acceptable equilibrium (Pareto optimal Nash equilibrium); and strong Nash equilibrium. We conclude in Section 5 with a report on two recent works on representations of constitutions under incomplete information.
Eco-Friendly Formulated Zinc Oxide Nanoparticles: Induction of Cell Cycle Arrest and Apoptosis in the MCF-7 Cancer Cell Line
Authors: Boroumand Moghaddam Amin , Moniri Mona , Azizi Susan , Abdul Rahim Raha , Bin Ariff Arbakariya , Navaderi Mohammad , Mohamad Rosfarizan
Published: October 2017

Green products have strong potential in the discovery and development of unique drugs. Zinc oxide nanoparticles (ZnO NPs) have been observed to have powerful cytotoxicity against cells that cause breast cancer. The present study aims to examine the cell cycle profile, status of cell death, and pathways of apoptosis in breast cancer cells (MCF-7) treated with biosynthesized ZnO NPs. The anti-proliferative activity of ZnO NPs was determined using MTT assay. Cell cycle analysis and the mode of cell death were evaluated using a flow cytometry instrument. Quantitative real-time-PCR (qRT-PCR) was employed to investigate the expression of apoptosis in MCF-7 cells. ZnO NPs were cytotoxic to the MCF-7 cells in a dose-dependent manner. The 50% growth inhibition concentration (IC50) of ZnO NPs at 24 h was 121 µg/mL. Cell cycle analysis revealed that ZnO NPs induced sub-G1 phase (apoptosis), with values of 1.87% at 0 μg/mL (control), 71.49% at IC25, 98.91% at IC50, and 99.44% at IC75. Annexin V/propidium iodide (PI) flow cytometry analysis confirmed that ZnO NPs induce apoptosis in MCF-7 cells. The pro-apoptotic genes p53, p21, Bax, and JNK were upregulated, whereas anti-apoptotic genes Bcl-2, AKT1, and ERK1/2 were downregulated in a dose-dependent manner. The arrest and apoptosis of MCF-7 cells were induced by ZnO NPs through several signalling pathways.
Experience of Japan in Achieving a Total Ban on Asbestos
Authors: Furuya Sugio , Takahashi Ken
Published: October 2017

This paper aims to examine the process through which a total ban on asbestos was achieved in Japan. We reconstructed the process, analyzed the roles of involved parties/events, and drew lessons from the Japanese experience of achieving the ban. In Japan, a bill to phase out asbestos was proposed in 1992 but rejected without deliberation. Wide support for such a ban subsequently grew, however, largely due to the actions of trade unions and civil societies in establishing a coalition, raising awareness, organizing asbestos victims and their families, and propagating information on international developments. A governmental decision towards a ban was made in 2002 based on several national and international factors. A huge asbestos scandal in 2005 preponed the achievement of a total ban and led to the establishment of comprehensive measures to tackle asbestos issues. However, challenges remain for the elimination of asbestos-related diseases.
Petroleum Hydrocarbon Profiles of Water and Sediment of Algoa Bay, Eastern Cape, South Africa
Authors: Adeniji Abiodun O. , Okoh Omobola O. , Okoh Anthony I.
Published: October 2017

Petroleum hydrocarbon profiles of water and sediment samples of Algoa Bay in the Eastern Cape Province of South Africa were assessed using standard analytical procedures. Water (from surface and bottom levels) and sediment samples were collected from five locations in the bay from February to June 2016. Extraction of the petroleum hydrocarbons from the water and sediment samples collected was achieved using liquid-liquid and Soxhlet extraction techniques, respectively, followed by column clean up. Target compounds were analytically determined with gas chromatography–flame ionization detector (GC-FID) and quantified by integrating the areas of both the resolved and unresolved components. Physicochemical properties of the water samples were also determined on site using a SeaBird 19plusV2 CTD SBE 55 device. Estimated limit of detection, limit of quantitation and relative standard deviation for the 35 n-alkane standards ranged from 0.06 to 0.13 μg/L, 0.30 to 0.69 μg/L and 3.61 to 8.32%, respectively. Results showed that total petroleum hydrocarbon (TPH) varied from 45.07 to 307 μg/L in the water and 0.72 to 27.03 mg/kg in the sediments. The mean concentrations of TPH in both the water and sediment samples from Algoa Bay revealed a slight level of pollution. The diagnostic indices used showed that the hydrocarbons in the area were from both biogenic and anthropogenic sources. Hence, there is need for adequate regulation and control of all activities contributing to the levels of petroleum hydrocarbon in the marine environment for the safety of human, aquatic and wild lives in the area.
Parents’ Perceived Barriers to Accessing Sports and Recreation Facilities in Ontario, Canada: Exploring the Relationships between Income, Neighbourhood Deprivation, and Community
Authors: Harrington Daniel , Jarvis Jocelyn , Manson Heather
Published: October 2017

Sports and recreation facilities provide places where children can be physically active. Previous research has shown that availability is often worse in lower-socioeconomic status (SES) areas, yet others have found inverse relationships, no relationships, or mixed findings. Since children’s health behaviours are influenced by their parents, it is important to understand parents’ perceived barriers to accessing sports and recreation facilities. Data from computer assisted telephone interviews with parents living in Ontario, Canada were merged via postal codes with neighbourhood deprivation data. Multivariable logistic regression modeling was used to estimate the likelihood that parents reported barriers to accessing local sports and recreation facilities. Parents with lower household incomes were more likely to report barriers to access. For each unit increase in deprivation score (i.e., more deprived), the likelihood of reporting a barrier increased 16% (95% CI: 1.04, 1.28). For parents, the relationships between household income, neighbourhood-level deprivation, and barriers are complex. Understanding these relationships is important for research, policy and planning, as parental barriers to opportunities for physical activity have implications for child health behaviours, and ultimately childhood overweight and obesity.
Immobilization of Lead Migrating from Contaminated Soil in Rhizosphere Soil of Barley (Hordeum vulgare L.) and Hairy Vetch (Vicia villosa) Using Hydroxyapatite
Authors: Katoh Masahiko , Risky Elsya , Sato Takeshi
Published: October 2017

This study conducted plant growth tests using a rhizobox system to quantitatively determine the distance of immobilization lead migrating from contaminated soil into uncontaminated rhizosphere soil, and to assess the lead phases accumulated in rhizosphere soil by sequential extraction. Without the hydroxyapatite, exchangeable lead fractions increased as the rhizosphere soil got closer to the contaminated soil. Exchangeable lead fractions were higher even in the rhizosphere soil that shares a boundary with the root surface than in the soil before being planted. Thus, plant growth of hairy vetch was lower in the soil without the hydroxyapatite than in the soil with the hydroxyapatite. The presence of hydroxyapatite may immobilize the majority of lead migrating from contaminated soil into the rhizosphere soil within 1 mm from the contaminated soil. The dominant lead fraction in the rhizosphere soil with the hydroxyapatite was residual. Thus, plant growth was not suppressed and the lead concentration of the plant shoot remained at the background level. These results indicate that the presence of hydroxyapatite in the rhizosphere soil at 5% wt may immobilize most of the lead migrating into the rhizosphere soil within 1 mm from the contaminated soil, resulting in the prevention of lead migration toward the root surface.
Flow Orientation Analysis for Major Activity Regions Based on Smart Card Transit Data
Authors: Singh Parul , Oh Kyuhyup , Jung Jae-Yoon
Published: October 2017

Analyzing public movement in transportation networks in a city is significant in understanding the life of citizen and making improved city plans for the future. This study focuses on investigating the flow orientation of major activity regions based on smart card transit data. The flow orientation based on the real movements such as transit data can provide the easiest way of understanding public movement in the complicated transportation networks. First, high inflow regions (HIRs) are identified from transit data for morning and evening peak hours. The morning and evening HIRs are used to represent major activity regions for major daytime activities and residential areas, respectively. Second, the directional orientation of flow is then derived through the directional inflow vectors of the HIRs to show the bias in directional orientation and compare flow orientation among major activity regions. Finally, clustering analysis for HIRs is applied to capture the main patterns of flow orientations in the city and visualize the patterns on the map. The proposed methodology was illustrated with smart card transit data of bus and subway transportation networks in Seoul, Korea. Some remarkable patterns in the distribution of movements and orientations were found inside the city. The proposed methodology is useful since it unfolds the complexity and makes it easy to understand the main movement patterns in terms of flow orientation.
Detection and Management of Mango Dieback Disease in the United Arab Emirates
Authors: Saeed Esam , Sham Arjun , AbuZarqa Ayah , A. Al Shurafa Khawla , S. Al Naqbi Tahra , Iratni Rabah , El-Tarabily Khaled , F. AbuQamar Synan
Published: October 2017

Mango is affected by different decline disorders causing significant losses to mango growers. In the United Arab Emirates (UAE), the pathogen was isolated from all tissues sampled from diseased trees affected by Lasiodiplodia theobromae. Symptoms at early stages of the disease included general wilting appearance of mango trees, and dieback of twigs. In advanced stages, the disease symptoms were also characterized by the curling and drying of leaves, leading to complete defoliation of the tree and discolouration of vascular regions of the stems and branches. To substantially reduce the devastating impact of dieback disease on mango, the fungus was first identified based on its morphological and cultural characteristics. Target regions of 5.8S rRNA (ITS) and elongation factor 1-α (EF1-α) genes of the pathogen were amplified and sequenced. We also found that the systemic chemical fungicides, Score®, Cidely® Top, and Penthiopyrad®, significantly inhibited the mycelial growth of L. theobromae both in vitro and in the greenhouse. Cidely® Top proved to be a highly effective fungicide against L. theobromae dieback disease also under field conditions. Altogether, the morphology of the fruiting structures, molecular identification and pathogenicity tests confirm that the causal agent of the mango dieback disease in the UAE is L. theobromae.
Advances in Biomarkers for PCa Diagnostics and Prognostics—A Way towards Personalized Medicine
Authors: Stephan Carsten , Jung Klaus
Published: October 2017

Prostate cancer (PCa) is, with an estimated number of 161,360 cases and 26,730 deaths in 2017, the most common malignancy in the USA [...]
Lomefloxacin Induces Oxidative Stress and Apoptosis in COLO829 Melanoma Cells
Authors: Beberok Artur , Wrześniok Dorota , Szlachta Martyna , Rok Jakub , Rzepka Zuzanna , Respondek Michalina , Buszman Ewa
Published: October 2017

Although some fluoroquinolones have been found to exert anti-tumor activity, studies on the effect of these drugs on melanoma cells are relatively rare. The aim of this study was to examine the effect of lomefloxacin on cell viability, reactive oxygen species production, redox balance, cell cycle distribution, DNA fragmentation, and apoptosis in COLO829 melanoma cells. Lomefloxacin decreases the cell viability in a dose- and time-dependent manner. For COLO829 cells treated with the drug for 24, 48, and 72 h, the values of IC50 were found to be 0.51, 0.33, and 0.25 mmol/L, respectively. The analyzed drug also altered the redox signaling pathways, as shown by intracellular reactive oxygen species overproduction and endogeneous glutathione depletion. After lomefloxacin treatment, the cells were arrested in S- and G2/M-phase, suggesting a mechanism related to topoisomerase II inhibition. DNA fragmentation was observed when the cells were exposed to increasing lomefloxacin concentrations and a prolongation of incubation time. Moreover, it was demonstrated that the drug induced mitochondrial membrane breakdown as an early hallmark of apoptosis. The obtained results provide a strong molecular basis for the pharmacologic effect underlying the potential use of lomefloxacin as a valuable agent for the treatment of melanoma in vivo.
Metallothioneins: Emerging Modulators in Immunity and Infection
Authors: Subramanian Vignesh Kavitha , Deepe Jr. George
Published: October 2017

Metallothioneins (MTs) are a family of metal-binding proteins virtually expressed in all organisms including prokaryotes, lower eukaryotes, invertebrates and mammals. These proteins regulate homeostasis of zinc (Zn) and copper (Cu), mitigate heavy metal poisoning, and alleviate superoxide stress. In recent years, MTs have emerged as an important, yet largely underappreciated, component of the immune system. Innate and adaptive immune cells regulate MTs in response to stress stimuli, cytokine signals and microbial challenge. Modulation of MTs in these cells in turn regulates metal ion release, transport and distribution, cellular redox status, enzyme function and cell signaling. While it is well established that the host strictly regulates availability of metal ions during microbial pathogenesis, we are only recently beginning to unravel the interplay between metal-regulatory pathways and immunological defenses. In this perspective, investigation of mechanisms that leverage the potential of MTs to orchestrate inflammatory responses and antimicrobial defenses has gained momentum. The purpose of this review, therefore, is to illumine the role of MTs in immune regulation. We discuss the mechanisms of MT induction and signaling in immune cells and explore the therapeutic potential of the MT-Zn axis in bolstering immune defenses against pathogens.
Time-Dependent Alterations of MMPs, TIMPs and Tendon Structure in Human Achilles Tendons after Acute Rupture
Authors: Minkwitz Susann , Schmock Aysha , Kurtoglu Alper , Tsitsilonis Serafeim , Manegold Sebastian , Wildemann Britt , Klatte-Schulz Franka
Published: October 2017

A balance between matrix metalloproteinases (MMPs) and their inhibitors (TIMPs) is required to maintain tendon homeostasis. Variation in this balance over time might impact on the success of tendon healing. This study aimed to analyze structural changes and the expression profile of MMPs and TIMPs in human Achilles tendons at different time-points after rupture. Biopsies from 37 patients with acute Achilles tendon rupture were taken at surgery and grouped according to time after rupture: early (2–4 days), middle (5–6 days), and late (≥7 days), and intact Achilles tendons served as control. The histological score increased from the early to the late time-point after rupture, indicating the progression towards a more degenerative status. In comparison to intact tendons, qRT-PCR analysis revealed a significantly increased expression of MMP-1, -2, -13, TIMP-1, COL1A1, and COL3A1 in ruptured tendons, whereas TIMP-3 decreased. Comparing the changes over time post rupture, the expression of MMP-9, -13, and COL1A1 significantly increased, whereas MMP-3 and -10 expression decreased. TIMP expression was not significantly altered over time. MMP staining by immunohistochemistry was positive in the ruptured tendons exemplarily analyzed from early and late time-points. The study demonstrates a pivotal contribution of all investigated MMPs and TIMP-1, but a minor role of TIMP-2, -3, and -4, in the early human tendon healing process.
Human Globozoospermia-Related Gene Spata16 Is Required for Sperm Formation Revealed by CRISPR/Cas9-Mediated Mouse Models
Authors: Fujihara Yoshitaka , Oji Asami , Larasati Tamara , Kojima-Kita Kanako , Ikawa Masahito
Published: October 2017

A recent genetic analysis of infertile globozoospermic patients identified causative mutations in three genes: a protein interacting with C kinase 1 (PICK1), dpy 19-like 2 (DPY19L2), and spermatogenesis associated 16 (SPATA16). Although mouse models have clarified the physiological functions of Pick1 and Dpy19l2 during spermatogenesis, Spata16 remains to be determined. Globozoospermic patients carried a homozygous point mutation in SPATA16 at 848G→A/R283Q. We generated CRISPR/Cas9-mediated mutant mice with the same amino acid substitution in the fourth exon of Spata16 to analyze the mutation site at R284Q, which corresponded with R283Q of mutated human SPATA16. We found that the point mutation in Spata16 was not essential for male fertility; however, deletion of the fourth exon of Spata16 resulted in infertile male mice due to spermiogenic arrest but not globozoospermia. This study demonstrates that Spata16 is indispensable for male fertility in mice, as well as in humans, as revealed by CRISPR/Cas9-mediated mouse models.
Collagen-Based Medical Device as a Stem Cell Carrier for Regenerative Medicine
Authors: Aubert Léa , Dubus Marie , Rammal Hassan , Bour Camille , Mongaret Céline , Boulagnon-Rombi Camille , Garnotel Roselyne , Schneider Céline , Rahouadj Rachid , Laurent Cedric , Gangloff Sophie C. , Velard Frédéric , Mauprivez Cedric , Kerdjoudj Halima
Published: October 2017

Maintenance of mesenchymal stem cells (MSCs) requires a tissue-specific microenvironment (i.e., niche), which is poorly represented by the typical plastic substrate used for two-dimensional growth of MSCs in a tissue culture flask. The objective of this study was to address the potential use of collagen-based medical devices (HEMOCOLLAGENE®, Saint-Maur-des-Fossés, France) as mimetic niche for MSCs with the ability to preserve human MSC stemness in vitro. With a chemical composition similar to type I collagen, HEMOCOLLAGENE® foam presented a porous and interconnected structure (>90%) and a relative low elastic modulus of around 60 kPa. Biological studies revealed an apparently inert microenvironment of HEMOCOLLAGENE® foam, where 80% of cultured human MSCs remained viable, adopted a flattened morphology, and maintained their undifferentiated state with basal secretory activity. Thus, three-dimensional HEMOCOLLAGENE® foams present an in vitro model that mimics the MSC niche with the capacity to support viable and quiescent MSCs within a low stiffness collagen I scaffold simulating Wharton’s jelly. These results suggest that haemostatic foam may be a useful and versatile carrier for MSC transplantation for regenerative medicine applications.
Kinases of eIF2a Switch Translation of mRNA Subset during Neuronal Plasticity
Authors: Chesnokova Ekaterina , Bal Natalia , Kolosov Peter
Published: October 2017

Compared to other types of cells, neurons express the largest number of diverse mRNAs, including neuron-specific ones. This mRNA diversity is required for neuronal function, memory storage, maintenance and retrieval. Regulation of translation in neurons is very complicated and involves various proteins. Some proteins, implementing translational control in other cell types, are used by neurons for synaptic plasticity. In this review, we discuss the neuron-specific activity of four kinases: protein kinase R (PKR), PKR-like endoplasmic reticulum kinase (PERK), general control nonderepressible 2 kinase (GCN2), and heme-reguated eIF2α kinase (HRI), the substrate for which is α-subunit of eukaryotic initiation factor 2 (eIF2α). Phosphorylation of eIF2α is necessary for the cell during stress conditions, such as lack of amino acids, energy stress or viral infection. We propose that, during memory formation, neurons use some mechanisms similar to those involved in the cellular stress. The four eIF2α kinases regulate translation of certain mRNAs containing upstream open reading frames (uORFs). These mRNAs encode proteins involved in the processes of long-term potentiation (LTP) or long-term depression (LTD). The review examines some neuronal proteins for which translation regulation by eIF2 was suggested and checked experimentally. Of such proteins, we pay close attention to protein kinase Mζ, which is involved in memory storage and regulated at the translational level.
The Interactive Roles of Lipopolysaccharides and dsRNA/Viruses on Respiratory Epithelial Cells and Dendritic Cells in Allergic Respiratory Disorders: The Hygiene Hypothesis
Authors: Lin Tsang-Hsiung , Su Hsing-Hao , Kang Hong-Yo , Chang Tsung-Hsien
Published: October 2017

The original hygiene hypothesis declares “more infections in early childhood protect against later atopy”. According to the hygiene hypothesis, the increased incidence of allergic disorders in developed countries is explained by the decrease of infections. Epithelial cells and dendritic cells play key roles in bridging the innate and adaptive immune systems. Among the various pattern-recognition receptor systems of epithelial cells and dendritic cells, including toll-like receptors (TLRs), nucleotide-binding oligomerization domain (NOD)-like receptors (NLRs) and others, TLRs are the key systems of immune response regulation. In humans, TLRs consist of TLR1 to TLR10. They regulate cellular responses through engagement with TLR ligands, e.g., lipopolysaccharides (LPS) acts through TLR4 and dsRNA acts through TLR3, but there are certain common components between these two TLR pathways. dsRNA activates epithelial cells and dendritic cells in different directions, resulting in allergy-related Th2-skewing tendency in epithelial cells, and Th1-skewing tendency in dendritic cells. The Th2-skewing effect by stimulation of dsRNA on epithelial cells could be suppressed by the presence of LPS above some threshold. When LPS level decreases, the Th2-skewing effect increases. It may be via these interrelated networks and related factors that LPS modifies the allergic responses and provides a plausible mechanism of the hygiene hypothesis. Several hygiene hypothesis-related phenomena, seemingly conflicting, are also discussed in this review, along with their proposed mechanisms.
The Dark Side of the Moon: The Right Ventricle
Authors: Foschi Massimiliano , Di Mauro Michele , Tancredi Fabrizio , Capparuccia Carlo , Petroni Renata , Leonzio Luigi , Romano Silvio , Gallina Sabina , Penco Maria , Cibelli Mario , Calafiore Antonio
Published: October 2017

The aim of this review article is to summarize current knowledge of the pathophysiology underlying right ventricular failure (RVF), focusing, in particular, on right ventricular assessment and prognosis. The right ventricle (RV) can tolerate volume overload well, but is not able to sustain pressure overload. Right ventricular hypertrophy (RVH), as a response to increased afterload, can be adaptive or maladaptive. The easiest and most common way to assess the RV is by two-dimensional (2D) trans-thoracic echocardiography measuring surrogate indexes, such as tricuspid annular plane systolic excursion (TAPSE), fractional area change (FAC), and tissue Doppler velocity of the lateral aspect of the tricuspid valvular plane. However, both volumes and function are better estimated by 3D echocardiography and cardiac magnetic resonance (CMR). The prognostic role of the RV in heart failure (HF), pulmonary hypertension (PH), acute myocardial infarction (AMI), and cardiac surgery has been overlooked for many years. However, several recent studies have placed much greater importance on the RV in prognostic assessments. In conclusion, RV dimensions and function should be routinely assessed in cardiovascular disease, as RVF has a significant impact on disease prognosis. In the presence of RVF, different therapeutic approaches, either pharmacological or surgical, may be beneficial.
Magnetic Properties of Fibonacci-Modulated Fe-Au Multilayer Metamaterials
Authors: Suwa Tomomi , Tomita Satoshi , Hosoito Nobuyoshi , Yanagi Hisao
Published: October 2017

Herein we experimentally study magnetic multilayer metamaterials with broken translational symmetry. Epitaxially-grown iron-gold (Fe-Au) multilayers modulated using Fibonacci sequence—referred to as magnetic inverse Fibonacci-modulated multilayers (IFMs)—are prepared using ultra-high-vacuum vapor deposition. Experimental results of in-situ reflection high-energy electron diffraction, magnetization curves, and ferromagnetic resonance demonstrate that the epitaxially-grown Fe-Au IFMs have quasi-isotropic magnetization, in contrast to the in-plane magnetization easy axis in the periodic multilayers.
Activation of Alkaline Irrigation Fluids in Endodontics
Authors: Walsh Laurence , George Roy
Published: October 2017

In conventional endodontic treatment, alkaline solutions of sodium hypochlorite (NaOCl) and ethylenediaminetetraacetic acid (EDTA) are used in combination to disinfect the root canal system and to eliminate debris and smear layers. An important concept that has emerged over recent years is the use of active physical methods for agitating these fluids to improve their penetration within areas that are not reached by endodontic instruments and to accelerate the chemical actions of these alkaline fluids against planktonic microorganisms, biofilms, soft tissue remnants and smear layers. Ultrasonic agitation and more recently pulsed lasers have emerged as two promising methods for activating endodontic irrigation fluids. Ultrasonic agitation with piezoelectric devices employs a moving tip, while laser agitation uses a stationary tip. Both methods cause cavitation, followed by implosions and shear forces which assist with debridement. Fluid streaming further enhances the activity of the fluids. While agitation enhances performance of irrigants, extrusion of fluids from the root canal during activation is a hazard that must be controlled.
Quantum Coherent States and Path Integral Method to Stochastically Determine the Anisotropic Volume Expansion in Lithiated Silicon Nanowires
Authors: Boone Donald
Published: October 2017

This computational research study will analyze the multi-physics of lithium ion insertion into a silicon nanowire in an attempt to explain the electrochemical kinetics at the nanoscale and quantum level. The electron coherent states and a quantum field version of photon density waves will be the joining theories that will explain the electron-photon interaction within the lithium-silicon lattice structure. These two quantum particles will be responsible for the photon absorption rate of silicon atoms that are hypothesized to be the leading cause of breaking diatomic silicon covalent bonds that ultimately leads to volume expansion. It will be demonstrated through the combination of Maxwell stress tensor, optical amplification and path integrals that a stochastic analyze using a variety of Poisson distributions that the anisotropic expansion rates in the <110>, <111> and <112> orthogonal directions confirms the findings ascertained in previous works made by other research groups. The computational findings presented in this work are similar to those which were discovered experimentally using transmission electron microscopy (TEM) and simulation models that used density functional theory (DFT) and molecular dynamics (MD). The refractive index and electric susceptibility parameters of lithiated silicon are interwoven in the first principle theoretical equations and appears frequently throughout this research presentation, which should serve to demonstrate the importance of these parameters in the understanding of this component in lithium ion batteries.
Free Volume Contributing to the Different Yield Behaviors between Tension and Compression Deformations in Metallic Glasses
Authors: Wang Pengwei , Li Haiyang , Yang Liang
Published: October 2017

The different deformation behaviors in the yield stage, in particular, of metallic glasses under uniaxial tension and compression are investigated from an atomic structural perspective, by applying both experimental and simulation methods. A new computational approach for quantitatively calculating free volumes (FVs) in structural models is developed, based on which the manner in which FVs contribute to deformation is studied. It is found that FVs have different expansion behaviors in terms of their saturation sizes and corresponding strain values, which are essential structural causes of different yield behaviors in these two deformations in metallic glasses.
Design and Fabrication of Capacitive Silicon Nanomechanical Resonators with Selective Vibration of a High-Order Mode
Authors: Toan Nguyen , Shimazaki Tsuyoshi , Inomata Naoki , Song Yunheub , Ono Takahito
Published: October 2017

This paper reports the design and fabrication of capacitive silicon nanomechanical resonators with the selective vibration of a high-order mode. Fixed-fixed beam capacitive silicon resonators have been successfully produced by the use of electron beam lithography, photolithography, deep reactive ion etching, and anodic bonding methods. All resonators with different vibration modes are designed to have the same resonant frequency for performance comparison. Measurement results show that higher-order mode capacitive silicon resonators can achieve lower insertion loss compared to that of lower-order mode capacitive silicon resonators. The motional resistance of the fourth mode vibration resonator is improved by 83%, 90%, and 93% over the third, second, and first mode vibration resonators, respectively.
The Application of Ultra-High-Performance Liquid Chromatography Coupled with a LTQ-Orbitrap Mass Technique to Reveal the Dynamic Accumulation of Secondary Metabolites in Licorice under ABA Stress
Authors: Li Da , Xu Guojie , Ren Guangxi , Sun Yufeng , Huang Ying , Liu Chunsheng
Published: October 2017

The traditional medicine licorice is the most widely consumed herbal product in the world. Although much research work on studying the changes in the active compounds of licorice has been reported, there are still many areas, such as the dynamic accumulation of secondary metabolites in licorice, that need to be further studied. In this study, the secondary metabolites from licorice under two different methods of stress were investigated by ultra-high-performance liquid chromatography coupled with hybrid linear ion trap–Orbitrap mass spectrometry (UHPLC-LTQ-Orbitrap-MS). A complex continuous coordination of flavonoids and triterpenoids in a network was modulated by different methods of stress during growth. The results showed that a total of 51 secondary metabolites were identified in licorice under ABA stress. The partial least squares–discriminate analysis (PLS-DA) revealed the distinction of obvious compounds among stress-specific districts relative to ABA stress. The targeted results showed that there were significant differences in the accumulation patterns of the deeply targeted 41 flavonoids and 10 triterpenoids compounds by PCA and PLS-DA analyses. To survey the effects of flavonoid and triterpenoid metabolism under ABA stress, we inspected the stress-specific metabolic changes. Our study testified that the majority of flavonoids and triterpenoids were elevated in licorice under ABA stress, while the signature metabolite affecting the dynamic accumulation of secondary metabolites was detected. Taken together, our results suggest that ABA-specific metabolite profiling dynamically changed in terms of the biosynthesis of flavonoids and triterpenoids, which may offer new trains of thought on the regular pattern of dynamic accumulation of secondary metabolites in licorice at the metabolite level. Our results also provide a reference for clinical applications and directional planting and licorice breeding.
A Systematic Review of Computational Drug Discovery, Development, and Repurposing for Ebola Virus Disease Treatment
Authors: Schuler James , Hudson Matthew , Schwartz Diane , Samudrala Ram
Published: October 2017

Ebola virus disease (EVD) is a deadly global public health threat, with no currently approved treatments. Traditional drug discovery and development is too expensive and inefficient to react quickly to the threat. We review published research studies that utilize computational approaches to find or develop drugs that target the Ebola virus and synthesize its results. A variety of hypothesized and/or novel treatments are reported to have potential anti-Ebola activity. Approaches that utilize multi-targeting/polypharmacology have the most promise in treating EVD.
Rapid Classification and Identification of Chemical Components of Schisandra Chinensis by UPLC-Q-TOF/MS Combined with Data Post-Processing
Authors: Yang Shenshen , Shan Lanlan , Luo Houmin , Sheng Xue , Du Jun , Li Yubo
Published: October 2017

Schisandra chinensis (known in Chinese as WuWeiZi, WWZ) has observable effects such as astringing the lung to stop coughs, arresting sweating, preserving semen and preventing diarrhea. The major components of WWZ include lignans, triterpenoids, organic acids and fatty acids. In this paper, a reliable method for the rapid identification of multiple components in WWZ by their characteristic fragments and neutral losses using UPLC-Q-TOF/MS technology was developed. After review of the literature and some reference experiments, the fragmentation pattern of several compounds were studied and summarized. Then, according to the corresponding characteristic fragments coupled with neutral losses in the positive or negative ion mode produced by different types of substances a rapid identification of target compounds was achieved. Finally, a total of 30 constituents of WWZ were successfully identified, including 15 lignans, nine triterpenoids, three organic acids and three fatty acids. The method established in this study not only provides a comprehensive analysis of the chemical ingredients of WWZ, providing a basis for further phytochemical studies on WWZ but also provides a more efficient way to solve the problem of identification of complex chemical constituents in traditional Chinese medicines.