bluuebunny/crossref_metadata_2025 huggingface dataset:
High Resolution Characterization of Lithological Heterogeneity of the Paaratte Formation, Otway Basin (Australia), a Coastal to Shallow-Marine Deposit
Authors: Mishra Achyut , Pajank Lukas , Haese Ralf R.
Published: June 2019

Coastal to shallow-marine deposits are inherently highly heterogeneous in sediment composition due to variable depositional conditions. Representation of heterogeneity at sub-seismic scales is required for understanding flow and geochemical processes and poses two challenges: Firstly, the representation of different rock types in geological models requires high resolution sampling vertically and laterally. Secondly, the heterogeneity in petrophysical, flow and mineralogical properties within each rock type needs to be sufficiently characterized in order to support (multiphase) flow and reactive transport simulations. This study addresses these challenges for the Paaratte Formation, Otway Basin (Australia), at the CO2CRC’s Otway Research Facility to enable detailed simulations of CO2 flow and reactions. Based on the analysis of wireline logs, hyperspectral core logs and discrete samples from wells CRC-2 and CRC-3, five rock types are defined and characterized for two coastal to shallow-marine parasequences comprising four depositional facies. A combination of wireline logs is used to derive rock type logs for the wells CRC-2 and CRC-3 at 10 cm vertical resolution and allows high resolution cross-well correlation providing insights into the lateral extent of deposits. Findings of this study will inform future desktop and field studies at the CO2CRC’s Otway Research Facility requiring information on sub-seismic lithological heterogeneity.
Inhabiting Liminality: Cosmopolitan World-Making in Naeem Mohaiemen’s Tripoli Cancelled
Authors: Tialiou Kelley
Published: June 2019

Motivated by “the need to embody … the palpable tension between the North and the South as it is reflected, articulated, and interpreted in contemporary cultural production”, documenta 14’s selection of Athens as a “vantage point … where Europe, Africa, the Middle East, and Asia face each other” is in line with the ancient Greek concept of the ‘cosmopolite’, a term that Diogenes first coined “as a means of overcoming the usual dualism Hellene/Barbarian”. In this article, I suggest that Naeem Mohaiemen’s feature film, Tripoli Cancelled (2017), commissioned by documenta 14 and premiered at the National Contemporary Art Museum in Athens, proposes a rich and compelling model of cosmopolitan world-making. Shot at the abandoned Elliniko Airport, the film is poetically suspended between fact and fiction, past and present, the historical and the incidental, the local and the global. Creatively positioning the concepts of cosmopolitanism, nostalgia, and hospitality in dialogue, I develop a theoretical model through which I seek to explore how the literally and metaphorically liminal space inhabited by the film’s anonymous protagonist resonates with the contemporary conditions of desperate migration.
Assessment of Local People Opinion After World Heritage Site Designation, Case Study: Historic City of Yazd, Iran
Authors: Nasrolahi Ahmad , Roux Jean-Michel , Ghasvarian Jahromi Leila , Khalili Mahmoudreza
Published: June 2019

Local participation in the cultural heritage conservation has always been a concern since the Venice Charter (1964). It seems the assumption of the World Heritage Center, and particularly their State Parties, is that local people living in a nominated site are willing to inscribe their properties on the World Heritage List. This research examines the points of view of a local community living in the buffer zone of the Historic City of Yazd in five categories: Willingness, quality of life, decision-making, benefits, and awareness after the designation as World Heritage Site. The main hypotheses are that local people did not agree to inscribe their properties on the World Heritage List, and their quality of life has not changed after registering. The methodology is based on both qualitative and quantitative methods by interviewing 400 people of both genders and different ages. The results show that the majority of local people living in the buffer zone were not satisfied to be on the list. In addition, more than 80% mentioned that the quality of life did not change at all after the inscription. There was a misunderstanding about the role of national and international organizations in World Heritage management and conservation among the local community.
Water Use and Leaf Nutrient Status for Terraced Cherimoya Trees in a Subtropical Mediterranean Environment
Authors: Durán-Zuazo Victor Hugo , Franco Tarifa Dionisio , García-Tejero Iván Francisco , Gutiérrez Gordillo Saray , Cermeño Sacristan Pedro , Pertiñez Roldan Juan José
Published: June 2019

Water scarcity in many semi-arid agricultural areas, in particular for the Mediterranean basin, is promoting changes in irrigated agriculture, with alternative strategies being introduced for water-use optimization. The coast of Granada and Malaga (Southeast Spain) is an economically important area for subtropical fruit cultivation. This intensively irrigated agriculture is characterized by requiring extra amounts of water and the adoption of sustainable practices to improve agricultural water management. A two-season experiment was conducted to assess (1) the water use in terraced cherimoya (Annona cherimola Mill. cv. Fino de Jete) orchards under conventional and organic production systems with drainage lysimeters, and (2) the impact on fruit yield and nutritional effects between the two considered production systems. Crop coefficient (Kc) values for cherimoya were 0.60–0.66, 0.64–0.71, and 0.48–0.62 at flowering, fruit set, and fruit growth, respectively. Fruit yield was similar in both systems, ranging from 47.1 for conventional to 44.1 kg tree−1 for organic farming, averaging 13.2 and 12.3 t·ha−1, respectively. No differences between these systems were observed in terms of leaf nutrient status, with variations in the N, P, and K contents during the different phenological stages. The N, P, and K lessen during flowering and fruit growth; the highest levels of these nutrients were fixed at harvest. These patterns were the opposite in Ca and Mg, ascribable to the antagonism between K and both Ca and Mg. Thus, these findings highlight the need to establish the optimal use of irrigation water with respect to crop requirements, thereby encouraging sustainable subtropical farming in terraces.
Understanding the Impacts of Crude Oil and its Induced Abiotic Stresses on Agrifood Production: A Review
Authors: Odukoya Johnson , Lambert Ronnie , Sakrabani Ruben
Published: June 2019

In many parts of the world, the agricultural sector is faced with a number of challenges including those arising from abiotic environmental stresses which are the key factors responsible for most reductions in agrifood production. Crude oil contamination, an abiotic stress factor and a common environmental contaminant, at toxic levels has negative impacts on plants. Although various attempts have been made to demonstrate the impact of abiotic stresses on crops, the underlying factors responsible for the effects of crude oil and its induced abiotic stresses on the composition of the stressed plants are poorly understood. Hence, this review provides an in-depth examination of the: (1) effect of petroleum hydrocarbons on plants; (2) impact of abiotic environmental stresses on crop quality; (3) mechanistic link between crude oil stress and its induced abiotic stresses; as well as (4) mode of action/plant response mechanism to these induced stresses. The paper clearly reveals the implications of crude oil-induced abiotic stresses arising from the soil-root-plant route and from direct application on plant leaves.
An Urban Flash Flood Alert Tool for Megacities—Application for Manhattan, New York City, USA
Authors: Al-Suhili Rafea , Cullen Cheila , Khanbilvardi Reza
Published: June 2019

Urban flooding is a frequent problem affecting cities all over the world. The problem is more significant now that the climate is changing and urbanization trends are increasing. Various, physical hydrological models such as the Environmental Protection Agency Storm Water Management Model (EPA SWMM), MIKE URBAN-II and others, have been developed to simulate flooding events in cities. However, they require high accuracy mapping and a simulation of the underground storm drainage system. Sadly, this capability is usually not available for older or larger so-called megacities. Other hydrological model types are classified in the semi-physical category, like Cellular Automata (CA), require the incorporation of very fine resolution data. These types of data, in turn, demand massive computer power and time for analysis. Furthermore, available forecasting systems provide a way to determine total rainfall during extreme events, but they do not tell us what areas will be flooded. This work introduces an urban flooding tool that couples a rainfall-runoff model with a flood map database to expedite the alert process and estimate flooded areas. A 0.30-m Lidar Digital Elevation Model (DEM) of the study area (in this case Manhattan, New York City) is divided into 140 sub-basins. Several flood maps for each sub-basin are generated and organized into a database. For any forecasted extreme rainfall event, the rainfall-runoff model predicts the expected runoff volume at different times during the storm interval. The system rapidly searches for the corresponding flood map that delineates the expected flood area. The sensitivity analysis of parameters in the model show that the effect of storm inlet flow head is approximately linear while the effects of the threshold infiltration rate, the number of storm inlets, and the storm inlet flow reduction factor are non-linear. The reduction factor variation is found to exhibit a high non-linearity variation, hence requiring further detailed investigation.
Adverse Childhood Experiences of Children Adopted from Care: The Importance of Adoptive Parental Warmth for Future Child Adjustment
Authors: Anthony Rebecca E. , Paine Amy L. , Shelton Katherine H.
Published: June 2019

We investigated the relationship between adverse childhood experiences (ACEs) and children’s internalising symptoms and externalising problems in the Wales Adoption Cohort Study, a prospective longitudinal study that used case file records (n = 374) for a sample of British children adopted from care (M = 2 years, 55% male). Parents (n = 96) completed questionnaires at 3–5 months, 15–17 months, and 31–33 months post-placement. We hypothesised that: (1) children adopted from care would have experienced more ACEs than children in the general population; (2) the number of ACEs would be associated with higher internalising symptom and externalising problem scores; and (3) adoptive parental warmth would moderate the relationship between ACEs and post-placement internalising symptoms and externalising problems. Nearly half (42%) of the children experienced four or more ACEs. Internalising symptoms and externalising problems were significantly higher than the UK general population. The number of ACEs was associated with internalising symptoms 3 years post-adoptive placement but this relationship was moderated by adoptive parental warmth. This study profiles the experiences and characteristics of a national sample of adopted children and highlights the potential importance of parent warmth as a factor that ameliorates the impact of ACEs on poor child outcomes.
Falls in Parkinson’s Disease Subtypes: Risk Factors, Locations and Circumstances
Authors: Pelicioni Paulo H. S. , Menant Jasmine C. , Latt Mark D. , Lord Stephen R.
Published: June 2019

People with Parkinson’s disease (PD) can be classified into those with postural instability and gait difficulty (PIGD subtype) and those manifesting tremor as the main symptoms (non-PIGD subtype). In a prospective cohort study of 113 people with PD we aimed to contrast fall rates and circumstances as well as a range of disease-related, clinical, and functional measures between the PD subtypes. Compared with non-PIGD participants, PIGD participants were significantly more likely to suffer more falls overall as well as more falls due to freezing of gait, balance-related falls and falls at home. The PIGD group also performed significantly worse in a range of fall-related clinical and functional measures including general cognitive status, executive function, quadriceps muscle strength, postural sway and the timed up and go test. These findings document the extent to which people with the PIGD subtype are at increased risk of falls, the circumstances in which they fall and their disease-related, clinical and functional impairments.
The Association between Organizational Justice and Psychological Well-Being by Regular Exercise in Korean Employees
Authors: Park Hanul , Lee Kang-Sook , Park Yong-Jun , Lee Dong-Joon , Lee Hyun-Kyung
Published: June 2019

Many studies have shown that organizational justice (OJ) is related to psychological determinants of employees’ physical and mental health in the workplace, and these health outcomes also lead to the psychological well-being (PW) of employees. Additionally, physical activity is one of the most important issues related to health in the workplace. This study compared the level of perceived OJ according to sociodemographic and lifestyle factors and examined the association between OJ and PW by regular exercise (hours per week) in Korean employees. This study used cross-sectional data obtained from 494 subjects in South Korea. Self-administered questionnaires comprising OJ, PW, and lifestyle factors (e.g., smoking, drinking, sleeping, and exercise) were completed by employees in April 2017. Multiple logistic regression analyses were conducted to estimate the association of procedural justice (PJ) and interactional justice (IJ) with the prevalence odds ratios and 95% confidence intervals of the high risk to PW. After the adjustment of sociodemographic characteristics and lifestyle factors, the main effects of PJ and IJ on the high risk to PW were significantly observed, and when these values were stratified by a regular exercise category, the lowest odds ratio was observed in a group that exercised for 1–2 h (hours per week). Organizations must encourage trust and consideration between employees and supervisors and carry out efforts to improve their environment, such as making the decision-making process fairer and encouraging employees to exercise regularly. This intervention may help prevent a high risk to PW.
Effect of an Oral Health Programme on Oral Health, Oral Intake, and Nutrition in Patients with Stroke and Dysphagia in Taiwan: A Randomised Controlled Trial
Authors: Chen Hsiao-Jung , Chen Jean-Lon , Chen Chung-Yao , Lee Megan , Chang Wei-Han , Huang Tzu-Ting
Published: June 2019

No previous studies have evaluated an oral health programme, before swallowing therapy, in patients with stroke and dysphagia in Taiwan. This randomised controlled trial evaluated the effect of an oral health programme (i.e., sputum assessment, Bass method-based tooth brushing, and tooth coating with fluoride toothpaste) before swallowing therapy. Sixty-six patients with stroke (23 female, 43 male) in our rehabilitation ward, who underwent nasogastric tube insertion, were assigned randomly to an oral care group (n = 33) and a control group (n = 33). Demographic data, oral health assessment, Functional Oral Intake Scale (FOIS) scores, Mini-Nutritional Assessment-Short Form (MNA-SF) scores, and nasogastric tube removal rates were compared between groups. We evaluated outcomes using generalised estimating equation analysis. Three weeks post-implementation, the oral care group had significant oral health improvements relative to the control group (95% CI =−2.69 to −1.25, Wald χ2 = 29.02, p < 0.001). There was no difference in the FOIS (95% CI = −0.16 to 0.89, Wald χ2 = 1.86, p > 0.05), MNA-SF (95% CI =−0.35 to 0.53, Wald χ2 =−0.17, p > 0.05), and nasogastric tube removal (p > 0.05) between groups. The oral care group had a higher, but non-significant FOIS score (3.94 vs 3.52) (p > 0.05). Routine oral health programmes implemented during stroke rehabilitation in patients with dysphagia may promote oral health and maintain oral intake.
The Potential Psychological Mechanism of Subjective Well-Being in Migrant Workers: A Structural Equation Models Analysis
Authors: Chen Hao , Wang Lei , Wei Yanxia , Ye Bo , Dai Junming , Gao Junling , Wang Fan , Fu Hua
Published: June 2019

Objective: The aim of this study was to identify the potential psychological mechanism of well-being in migrants in Shanghai, China. Methods: A cross-sectional study was conducted in 2018. First, a literature review was conducted to understand the salutogenesis of migrants in China. Then, 2573 random participants were recruited from six workplaces and public places in six districts of Shanghai. The Chinese versions of the Patient Health Questionnaire-9 (PHQ-9), the Personal Wellbeing Index (PWI), and the Sense of Coherence (SOC) Scale were used to evaluate the depression, subjective well-being (SWB), and SOC of migrants. The t-test, ANOVA, and multiple linear regression and structural equation models (SEM) were used to analyze the correlations and paths among generalized resistant resources (GRRs), SOC, PHQ, and SWB. Results: The subjects were aged between 18 and 58 (mean, 28.17; SD, 6.99). SOC showed a positive correlation with SWB (r = 0.46, p < 0.001) and a negative correlation to PHQ (r = −0.53, p < 0.001). After controlling for the demographic characteristics, we found that PHQ, SOC (comprehensibility, manageability, meaningfulness), and GRRs (income ratio, marital status) contributed 33.3% of the variance in SWB, and their linear regression coefficients were: −0.32 (p < 0.001), 0.09 (p < 0.001), 0.09 (p < 0.001), 0.15 (p < 0.001), 0.06 (p < 0.05), and 0.16 (p < 0.05), respectively. These findings not only confirmed the direct association among SOC, PHQ and SWB, but also verified two underlying mechanisms regarding the mediating effect of SOC by using SEM: (1) GRRs (income ratio, marital status) are positively associated with a higher SOC, which further contributes to favorable SWB; and (2) PHQ is negatively associated with poor SWB indirectly via SOC. Conclusion: Migrant workers with low SOC and high PHQ are vulnerable to poor well-being levels. Meanwhile, GRRs (income ratio, marital status) may strengthen the SOC level, and can be regarded as the basis of intervention. Further investigation may be needed to focus on external psychological support factors.
Somatostatin Analogues in the Treatment of Neuroendocrine Tumors: Past, Present and Future
Authors: Stueven Anna Kathrin , Kayser Antonin , Wetz Christoph , Amthauer Holger , Wree Alexander , Tacke Frank , Wiedenmann Bertram , Roderburg Christoph , Jann Henning
Published: June 2019

In recent decades, the incidence of neuroendocrine tumors (NETs) has steadily increased. Due to the slow-growing nature of these tumors and the lack of early symptoms, most cases are diagnosed at advanced stages, when curative treatment options are no longer available. Prognosis and survival of patients with NETs are determined by the location of the primary lesion, biochemical functional status, differentiation, initial staging, and response to treatment. Somatostatin analogue (SSA) therapy has been a mainstay of antisecretory therapy in functioning neuroendocrine tumors, which cause various clinical symptoms depending on hormonal hypersecretion. Beyond symptomatic management, recent research demonstrates that SSAs exert antiproliferative effects and inhibit tumor growth via the somatostatin receptor 2 (SSTR2). Both the PROMID (placebo-controlled, prospective, randomized study in patients with metastatic neuroendocrine midgut tumors) and the CLARINET (controlled study of lanreotide antiproliferative response in neuroendocrine tumors) trial showed a statistically significant prolongation of time to progression/progression-free survival (TTP/PFS) upon SSA treatment, compared to placebo. Moreover, the combination of SSA with peptide receptor radionuclide therapy (PRRT) in small intestinal NETs has proven efficacy in the phase 3 neuroendocrine tumours therapy (NETTER 1) trial. PRRT is currently being tested for enteropancreatic NETs versus everolimus in the COMPETE trial, and the potential of SSTR-antagonists in PRRT is now being evaluated in early phase I/II clinical trials. This review provides a synopsis on the pharmacological development of SSAs and their use as antisecretory drugs. Moreover, this review highlights the clinical evidence of SSAs in monotherapy, and in combination with other treatment modalities, as applied to the antiproliferative management of neuroendocrine tumors with special attention to recent high-quality phase III trials.
Functional Protein-Based Bioinspired Nanomaterials: From Coupled Proteins, Synthetic Approaches, Nanostructures to Applications
Authors: Zhang Dong , Wang Yi
Published: June 2019

Protein-based bioinspired nanomaterials (PBNs) combines the advantage of the size, shape, and surface chemistry of nanomaterials, the morphology and functions of natural materials, and the physical and chemical properties of various proteins. Recently, there are many exciting developments on biomimetic nanomaterials using proteins for different applications including, tissue engineering, drug delivery, diagnosis and therapy, smart materials and structures, and water collection and separation. Protein-based biomaterials with high biocompatibility and biodegradability could be modified to obtain the healing effects of natural organisms after injury by mimicking the extracellular matrix. For cancer and other diseases that are difficult to cure now, new therapeutic methods involving different kinds of biomaterials are studied. The nanomaterials with surface modification, which can achieve high drug loading, can be used as drug carriers to enhance target and trigger deliveries. For environment protection and the sustainability of the world, protein-based nanomaterials are also applied for water treatment. A wide range of contaminants from natural water source, such as organic dyes, oil substances, and multiple heavy ions, could be absorbed by protein-based nanomaterials. This review summarizes the formation and application of functional PBNs, and the details of their nanostructures, the proteins involved, and the synthetic approaches are addressed.
New Lectins from Mediterranean Flora. Activity against HT29 Colon Cancer Cells
Authors: Oliveira Isabel , Nunes António , Lima Ana , Borralho Pedro , Rodrigues Cecília , Ferreira Ricardo , Ribeiro Ana
Published: June 2019

Experiments conducted in vitro and in vivo, as well as some preclinical trials for cancer therapeutics, support the antineoplastic properties of lectins. A screening of antitumoral activity on HT29 colon cancer cells, based on polypeptide characterization and specific lectin binding to HT29 cells membrane receptors, was performed in order to assess the bioactivities present in four Mediterranean plant species: Juniperus oxycedrus subsp. oxycedrus, Juniperus oxycedrus subsp. badia, Arbutus unedo and Corema album. Total leaf proteins from each species were evaluated with respect to cell viability and inhibitory activities on HT29 cells (cell migration, matrix metalloproteinase –MMP proteolytic activities). A discussion is presented on a possible mechanism justifying the specific binding of lectins to HT29 cell receptors. All species revealed the presence of proteins with affinity to HT29 cell glycosylated receptors, possibly explaining the differential antitumor activity exhibited by the two most promising species, Juniperus oxycedrus subsp. badia and Arbutus unedo.
A Novel PL9 Pectate Lyase from Paenibacillus polymyxa KF-1: Cloning, Expression, and Its Application in Pectin Degradation
Authors: Yuan Ye , Zhang Xin-Yu , Zhao Yan , Zhang Han , Zhou Yi-Fa , Gao Juan
Published: June 2019

Pectate lyases play an important role in pectin degradation, and therefore are highly useful in the food and textile industries. Here, we report on the cloning of an alkaline pectate lyase gene (pppel9a) from Paenibacillus polymyxa KF-1. The full-length gene (1350 bp) encodes for a 449-residue protein that belongs to the polysaccharide lyase family 9 (PL9). Recombinant PpPel9a produced in Escherichia coli was purified to electrophoretic homogeneity in a single step using Ni2+-NTA affinity chromatography. The enzyme activity of PpPel9a (apparent molecular weight of 45.3 kDa) was found to be optimal at pH 10.0 and 40 °C, with substrate preference for homogalacturonan type (HG) pectins vis-à-vis rhamnogalacturonan-I (RG-I) type pectins. Using HG-type pectins as substrate, PpPel9a showed greater activity with de-esterified HGs. In addition, PpPel9a was active against water-soluble pectins isolated from different plants. Using this lyase, we degraded citrus pectin, purified fractions using Diethylaminoethyl (DEAE)-sepharose column chromatography, and characterized the main fraction MCP-0.3. High-performance gel permeation chromatography (HPGPC) analysis showed that the molecular mass of citrus pectin (~230.2 kDa) was reduced to ~24 kDa upon degradation. Ultra-performance liquid chromatography - tandem mass spectrometer (UPLC-MS) and monosaccharide composition analyses demonstrated that PpPel9a worked as an endo-pectate lyase, which acted primarily on the HG domain of citrus pectin. In vitro testing showed that the degradation product MCP-0.3 significantly promotes the growth of Lactobacillus plantarum and L. rhamnosus. In this regard, the enzyme has potential in the preparation of pharmacologically active pectin products.
Concentration of Fe(3+)-Triapine in BEAS-2B Cells
Authors: Antholine William E. , Myers Charles R.
Published: June 2019

An electron paramagnetic resonance (EPR) method was used to determine the concentration of the antitumor agent Triapine in BEAS-2B cells when Triapine was bound to iron (Fe). Knowledge of the concentration of Fe-Triapine in tumor cells may be useful to adjust the administration of the drug or to adjust iron uptake in tumor cells. An EPR spectrum is obtained for Fe(3+)-Triapine, Fe(3+)(Tp)2+, in BEAS-2B cells after addition of Fe(3+)(Tp)2+. Detection of the low spin signal for Fe(3+)(Tp)2+ shows that the Fe(3+)(Tp)2+ complex is intact in these cells. It is proposed that Triapine acquires iron from transferrin in cells including tumor cells. Here, it is shown that iron from purified Fe-transferrin is transferred to Triapine after the addition of ascorbate. To our knowledge, this is the first time that the EPR method has been used to determine the concentration of an iron antitumor agent in cells.
Mitochondrial AOX Supports Redox Balance of Photosynthetic Electron Transport, Primary Metabolite Balance, and Growth in Arabidopsis thaliana under High Light
Authors: Jiang Zhenxiang , Watanabe Chihiro K. A. , Miyagi Atsuko , Kawai-Yamada Maki , Terashima Ichiro , Noguchi Ko
Published: June 2019

When leaves receive excess light energy, excess reductants accumulate in chloroplasts. It is suggested that some of the reductants are oxidized by the mitochondrial respiratory chain. Alternative oxidase (AOX), a non-energy conserving terminal oxidase, was upregulated in the photosynthetic mutant of Arabidopsis thaliana, pgr5, which accumulated reductants in chloroplast stroma. AOX is suggested to have an important role in dissipating reductants under high light (HL) conditions, but its physiological importance and underlying mechanisms are not yet known. Here, we compared wild-type (WT), pgr5, and a double mutant of AOX1a-knockout plant (aox1a) and pgr5 (aox1a/pgr5) grown under high- and low-light conditions, and conducted physiological analyses. The net assimilation rate (NAR) was lower in aox1a/pgr5 than that in the other genotypes at the early growth stage, while the leaf area ratio was higher in aox1a/pgr5. We assessed detailed mechanisms in relation to NAR. In aox1a/pgr5, photosystem II parameters decreased under HL, whereas respiratory O2 uptake rates increased. Some intermediates in the tricarboxylic acid (TCA) cycle and Calvin cycle decreased in aox1a/pgr5, whereas γ-aminobutyric acid (GABA) and N-rich amino acids increased in aox1a/pgr5. Under HL, AOX may have an important role in dissipating excess reductants to prevent the reduction of photosynthetic electron transport and imbalance in primary metabolite levels.
Analysis of Expression and Functional Activity of Aromatic L-Amino Acid Decarboxylase (DDC) and Serotonin Transporter (SERT) as Potential Sources of Serotonin in Mouse Ovary
Authors: Nikishin Denis A. , Alyoshina Nina M. , Semenova Maria L. , Shmukler Yuri B.
Published: June 2019

The origin of serotonin in the ovary is the key question for understanding mechanisms of serotonergic regulation of reproductive function. We performed a study of the expression and functional activity of the serotonin transporter (SERT) and the enzyme for the synthesis of serotonin, aromatic l-amino acid decarboxylase (DDC) in mouse ovary. A pronounced peak of SERT mRNA expression occurs at the age of 14 days, but serotonin synthesis enzymes are expressed at the maximum level in the ovaries of newborn mice. SERT is detected immunohistochemically in all cellular compartments of the ovary with a maximum level of immunostaining in the oocytes of growing ovarian follicles. DDC immunolocalization, in contrast, is detected to a greater extent in primordial follicle oocytes, and decreases at the later stages of folliculogenesis. Serotonin synthesis in all cellular compartments occurs at very low levels, whereas specific serotonin uptake is clearly present, leading to a significant increase in serotonin content in the oocytes of growing primary and secondary follicles. These data indicate that the main mechanism of serotonin accumulation in mouse ovary is its uptake by the specific SERT membrane transporter, which is active in the oocytes of the growing ovarian follicles.
A Gene Regulatory Network Controlled by BpERF2 and BpMYB102 in Birch under Drought Conditions
Authors: Wen Xuejing , Wang Jingxin , Zhang Daoyuan , Wang Yucheng
Published: June 2019

Gene expression profiles are powerful tools for investigating mechanisms of plant stress tolerance. Betula platyphylla (birch) is a widely distributed tree, but its drought-tolerance mechanism has been little studied. Using RNA-Seq, we identified 2917 birch genes involved in its response to drought stress. These drought-responsive genes include the late embryogenesis abundant (LEA) family, heat shock protein (HSP) family, water shortage-related and ROS-scavenging proteins, and many transcription factors (TFs). Among the drought-induced TFs, the ethylene responsive factor (ERF) and myeloblastosis oncogene (MYB) families were the most abundant. BpERF2 and BpMYB102, which were strongly induced by drought and had high transcription levels, were selected to study their regulatory networks. BpERF2 and BpMYB102 both played roles in enhancing drought tolerance in birch. Chromatin immunoprecipitation combined with qRT-PCR indicated that BpERF2 regulated genes such as those in the LEA and HSP families, while BpMYB102 regulated genes such as Pathogenesis-related Protein 1 (PRP1) and 4-Coumarate:Coenzyme A Ligase 10 (4CL10). Multiple genes were regulated by both BpERF2 and BpMYB102. We further characterized the function of some of these genes, and the genes that encode Root Primordium Defective 1 (RPD1), PRP1, 4CL10, LEA1, SOD5, and HSPs were found to be involved in drought tolerance. Therefore, our results suggest that BpERF2 and BpMYB102 serve as transcription factors that regulate a series of drought-tolerance genes in B. platyphylla to improve drought tolerance.
Comparative Integrated Omics Analysis of the Hfq Regulon in Bordetella pertussis
Authors: Dienstbier Ana , Amman Fabian , Štipl Daniel , Petráčková Denisa , Večerek Branislav
Published: June 2019

Bordetella pertussis is a Gram-negative strictly human pathogen of the respiratory tract and the etiological agent of whooping cough (pertussis). Previously, we have shown that RNA chaperone Hfq is required for virulence of B. pertussis. Furthermore, microarray analysis revealed that a large number of genes are affected by the lack of Hfq. This study represents the first attempt to characterize the Hfq regulon in bacterial pathogen using an integrative omics approach. Gene expression profiles were analyzed by RNA-seq and protein amounts in cell-associated and cell-free fractions were determined by LC-MS/MS technique. Comparative analysis of transcriptomic and proteomic data revealed solid correlation (r2 = 0.4) considering the role of Hfq in post-transcriptional control of gene expression. Importantly, our study confirms and further enlightens the role of Hfq in pathogenicity of B. pertussis as it shows that Δhfq strain displays strongly impaired secretion of substrates of Type III secretion system (T3SS) and substantially reduced resistance to serum killing. On the other hand, significantly increased production of proteins implicated in transport of important metabolites and essential nutrients observed in the mutant seems to compensate for the physiological defect introduced by the deletion of the hfq gene.
Antiproliferative Activity of Pt(IV) Conjugates Containing the Non-Steroidal Anti-Inflammatory Drugs (NSAIDs) Ketoprofen and Naproxen †
Authors: Ravera Mauro , Zanellato Ilaria , Gabano Elisabetta , Perin Elena , Rangone Beatrice , Coppola Marco , Osella Domenico
Published: June 2019

Cisplatin and several non-steroidal anti-inflammatory drugs (NSAIDs) have been proven to act synergistically or at least additively on several tumor cell lines. Dual-action cisplatin-based Pt(IV) combos containing ketoprofen and naproxen offer good antiproliferative performance on a panel of human tumor cell lines, including a malignant pleural mesothelioma (MPM) one, a very chemoresistant tumor. The main reason of the increased activity relies on the enhanced lipophilicity of these Pt(IV) conjugates that in turn promotes increased cellular accumulation. A quick Pt(IV)→Pt(II) reduction generates the active cisplatin metabolite. The NSAID adjuvant action seems to be almost independent from cyclooxygenase-2 (COX-2) expression in the tumor cells under investigation (lung A-549, colon HT-29, HCT 116, SW480, ovarian A2780, and biphasic MPM MSTO-211H), but it seems to rely (at least in part) on the activation of the NSAID activated gene, NAG-1 (a member of the transforming growth factor beta, TGF-β, superfamily), which has been suggested to be involved in NSAID antiproliferative activity.
Physiological Significance of the Force-Velocity Relation in Skeletal Muscle and Muscle Fibers
Authors: Sugi Haruo , Ohno Tetsuo
Published: June 2019

The relation between the force (load) and the velocity of shortening (V) in contracting skeletal muscle is part of a rectangular hyperbola: (P + a) V = b(Po − P); where Po is the maximum isometric force and a and b are constants. The force–velocity (P–V) relation suggests that muscle can regulate its energy output depending on the load imposed on it (Hill, 1938). After the establishment of the sliding filament mechanism (H.E. Huxley and Hanson, 1954), the P–V relation has been regarded to reflect the cyclic interaction between myosin heads in myosin filaments and the corresponding myosin-binding sites in actin filaments, coupled with ATP hydrolysis (A.F. Huxley, 1957). In single skeletal muscle fibers, however, the P–V relation deviates from the hyperbola at the high force region, indicating complicated characteristics of the cyclic actin–myosin interaction. To correlate the P–V relation with kinetics of actin–myosin interaction, skinned muscle fibers have been developed, in which the surface membrane is removed to control chemical and ionic conditions around the 3D lattice of actin and myosin filaments. This article also deals with experimental methods with which the structural instability of skinned fibers can be overcome by applying parabolic decreases in fiber length.
Anti-Oxidant Activity and Dust-Proof Effect of Chitosan with Different Molecular Weights
Authors: Lee Yong Hyun , Park So Yeon , Park Jae Eun , Jung Byung Ok , Park Jung Eun , Park Jae Kweon , Hwang You Jin
Published: June 2019

High molecular weight chitosan (HMWC) was degraded to prepare chitosan with different molecular weight based on the fenton reaction, which can produce aggressive OH-radicals produced from hydrogen peroxide in the presence of catalytic metal ions. The relative molecular weight, anti-oxidant activity, and fine dust removal effect of chitosan hydrolysates were elucidated to define their molecular weight and their potent biological activity. Our results demonstrate that chitosan hydrolysates derived from the hydrolysis of HMWC may possess significant free-radical scavenging activity as good anti-oxidants against the radical scavenging activity of DPPH and ABTS, respectively. Furthermore, chitosan hydrolysates can effectively eliminate fine dust, which may contain some particulate matter (PM) and unknown species of microorganisms from the air, suggesting that our data provide important information for producing air filters, dust-proof masks and skin cleaner for the purpose of human healthcare and well-being.
Transcriptional Regulation of gga-miR-451 by AhR:Arnt in Mycoplasma gallisepticum (HS Strain) Infection
Authors: Zhao Yabo , Fu Yali , Sun Yingfei , Zou Mengyun , Peng Xiuli
Published: June 2019

MicroRNAs (miRNAs) have been determined to be important regulators for pathogenic microorganism infection. However, it is largely unclear how miRNAs are triggered during pathogen infection. We previously reported that the up-regulation of gga-miR-451 negatively regulates the Mycoplasma gallisepticum (MG)-induced production of inflammatory cytokines via targeting tyrosine3-monooxygenase/tryptophan5-monooxygenase activation protein zeta (YWHAZ). The aim of this study was to investigate the mechanism regulating gga-miR-451 in MG infection in chickens. Analysis of gga-miR-451 precursor, pri-miR-451, and pre-miR-451 indicated that the regulation occurred transcriptionally. We also identified the transcriptional regulatory region of gga-miR-451 that contained consensus-binding motif for aryl hydrocarbon receptor (AhR) and aryl hydrocarbon receptor nuclear translocator (Arnt) complex, which is known as the transcription factor that regulates gene expression. Luciferase reporter assays combined with chromatin immunoprecipitation (ChIP) demonstrated that AhR:Arnt bound directly to the promoter elements of gga-miR-451, which were responsible for gga-miR-451 transcription in the context of MG infection. Furthermore, upregulation of AhR:Arnt significantly induced gga-miR-451 and inhibited YWHAZ expression, suggesting that AhR:Arnt may play an anti-inflammatory role in MG infection. This discovery suggests that induced gga-miR-451 expression is modulated by AhR:Arnt in response to MG infection.
Stabilizing Techniques and Guided Imagery for Traumatized Male Refugees in a German State Registration and Reception Center: A Qualitative Study on a Psychotherapeutic Group Intervention
Authors: Zehetmair Catharina , Tegeler Inga , Kaufmann Claudia , Klippel Anne , Reddemann Luise , Junne Florian , Herpertz Sabine , Friederich Hans-Christoph , Nikendei Christoph
Published: June 2019

Refugees have an increased risk of developing mental health problems. Due to the unstable setting in refugee state registration and reception centers, recommended trauma-focused treatment approaches are often not applicable. For this purpose, we devised a suitable therapeutic approach to treat traumatized refugees in a German state registration and reception center: Group therapy, focusing on stabilizing techniques and guided imagery according to Reddemann (2017). From May 2017 to April 2018, we conducted semi-structured interviews with n = 30 traumatized refugees to assess their experiences with the stabilizing techniques and guided imagery in group sessions and self-practice. Participants mainly reported that they had more pleasant feelings, felt increasingly relaxed, and could better handle recurrent thoughts. Additionally, the participants noticed that their psychosocial functioning had improved. The main difficulties that participants encountered were feeling stressed, having difficulties staying focused, or concentrating on the techniques. During self-practice, the participants found it most challenging that they did not have any verbal guidance, were often distracted by the surroundings in the accommodation, and had recurrent thoughts about post-migratory stressors, such as insecurity concerning the future or the application for asylum. Our results show that stabilizing techniques and guided imagery according to Reddemann (2017) are a suitable approach to treat traumatized refugees living in volatile conditions.
Pulmonary Embolism and Coexisting Deep Vein Thrombosis: A Detrimental Association?
Authors: Cordeanu Elena-Mihaela , Lambach Hélène , Heitz Marie , Di Cesare Julie , Mirea Corina , Faller Alix-Marie , Cavaro Anne-Cécile , Frantz Anne-Sophie , Gaertner Sebastien , Schini-Kerth Valérie , Stephan Dominique
Published: June 2019

Background: The prognostic significance of coexisting deep vein thrombosis (DVT) in acute pulmonary embolism (PE) is controversial. This study aimed to provide routine patient care data on the impact of this association on PE severity and 3-month outcomes in a population presenting with symptomatic venous thromboembolism (VTE) from the REMOTEV registry. Methods and Results: REMOTEV is a prospective, non-interventional study of patients with acute symptomatic VTE, treated with direct oral anticoagulants (DOACs) or standard anticoagulation (vitamin K antagonists (VKA) or parenteral heparin/fondaparinux alone) for at least 3 months. From 1 November 2013 to 28 February 2018, among 1241 consecutive patients included, 1192 had a follow-up of at least 3 months and, among them, 1037 had PE with (727) or without DVT (310). The median age was 69 (55–80, 25th–75th percentiles). Patients with PE-associated DVT had more severe forms of PE (p < 0.0001) and, when DVT was present, proximal location was significantly correlated to PE severity (p < 0.01). However, no difference in all-cause mortality rate (hazard ratio (HR) 1.36 (CI 95% 0.69–2.92)), nor in the composite criterion of all-cause mortality and recurrence rate (HR 1.56 (CI 95% 0.83–3.10)) was noted at 3 months of follow-up. Conclusion: In REMOTEV, coexisting DVT was associated with a higher severity of PE, with no impact on short-term prognosis.
Protein Kinase B and Extracellular Signal-Regulated Kinase Inactivation is Associated with Regorafenib-Induced Inhibition of Osteosarcoma Progression In Vitro and In Vivo
Authors: Pan Po-Jung , Liu Yu-Chang , Hsu Fei-Ting
Published: June 2019

Osteosarcoma is the most common type of bone cancer. Multimodality treatment involving chemotherapy, radiotherapy and surgery is not effective enough to control osteosarcoma. Regorafenib, the oral multi-kinase inhibitor, has been shown to have positive efficacy on disease progression delay in chemotherapy resistant osteosarcoma patients. However anti-cancer effect and mechanism of regorafenib in osteosarcoma is ambiguous. Thus, the aim of this study is to investigate the efficacy and molecular mechanism of regorafenib on osteosarcoma in vitro and in vivo. Human osteosarcomas U-2 OS or MG-63 were treated with regorafenib, miltefosine (protein kinase B (AKT) inhibitor), or PD98059 (mitogen-activated protein/extracellular signal-regulated kinase (MEK) pathway inhibitor) for 24 or 48 h. Cell viability, apoptotic signaling transduction, tumor invasion, expression of tumor progression-associated proteins and tumor growth after regorafenib treatment were assayed by MTT 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide, flow cytometry, transwell assay, Western blotting assay and in vivo animal experiment, respectively. In these studies, we also indicated that regorafenib suppressed cell growth by prompting apoptosis of osteosarcoma cells, which is mediated through inactivation of ERK and AKT signaling pathways. After regorafenib treatment, downregulation of related genes in invasion (vascular endothelial growth factor (VEGF) and matrix metallopeptidase 9 (MMP-9)), proliferation (CyclinD1) and anti-apoptosis (X-linked inhibitor of apoptosis protein (XIAP), myeloid cell leukemia-1 (MCL-1), and cellular FLICE (FADD-like IL-1β-converting enzyme)-inhibitory protein (C-FLIP)) were found. Moreover, upregulation of caspase-3 and caspase-8 cleavage were also observed. In sum, we suggest that regorafenib has potential to suppress osteosarcoma progression via inactivation of AKT and ERK mediated signaling pathway.
Dysfunctional Coping Mechanisms Contribute to Dry Eye Symptoms
Authors: Patel Sneh , Felix Elizabeth R , Levitt Roy C , Sarantopoulos Constantine D. , Galor Anat
Published: June 2019

Dysfunctional coping behaviors, such as catastrophizing, have been implicated in pain severity and chronicity across several pain disorders. However, the impact of dysfunctional coping has not been examined under the context of dry eye (DE). This study evaluates relationships between catastrophizing and measures of DE, including pain severity and pain-related daily interference. The population consisted of patients seen at Miami Veterans Affairs eye clinic between April 2016 and October 2017. Patients filled out standardized questionnaires assessing symptoms of DE and eye pain, non-ocular pain, mental health, coping behaviors (Pain Catastrophizing Scale, PCS), and pain-related daily interference as a perceived impact on quality of life (Multidimensional Pain Inventory, Interference Subscale, MPI-Interference), and all patients underwent an ocular surface examination. In total, 194 patients participated, with a mean age of 58.8 ± 9.6 years, the majority being male, non-Hispanic, and black. PCS (catastrophizing) was correlated with DE symptom severity, including Dry-Eye Questionnaire 5 (DEQ5; r = 0.41, p < 0.0005), Ocular Surface Disease Index (OSDI; r = 0.40, p < 0.0005), and neuropathic-like eye pain (Neuropathic Pain Symptom Inventory-Eye (NPSI-Eye; r = 0.48, p < 0.0005). Most tear metrics, on the other hand, did not correlate with PCS. Linear regressions showed that PCS, non-ocular pain intensity, and number of pain conditions were significant predictors of DEQ5 (overall DE symptoms), while PCS and non-ocular pain intensity were predictors of NPSI-Eye scores, as were insomnia scores and analgesic use. In a separate analysis, PCS and DE symptoms (OSDI) associated with pain-related interference (MPI-Interference) along with non-ocular pain intensity, post-traumatic stress disorder (PTSD), number of pain conditions, and non-Hispanic ethnicity. These findings suggest that catastrophizing is not significantly related to signs of DE, but is strongly associated to pain-related symptoms of DE and daily interference due to pain.