bluuebunny/crossref_metadata_2025 huggingface dataset:
Table S2 from Epigenetic Silencing of BMP6 by the SIN3A–HDAC1/2 Repressor Complex Drives Melanoma Metastasis via FAM83G/PAWS1
Authors: Min Dongkook , Byun Jaemin , Lee Eun-Joon , Khan Abdul A. , Liu Christina , Loudig Oliver , Hu Wei , Zhao Yong , Herlyn Meenhard , Tycko Benjamin , Cole Phillip A. , Ryu Byungwoo
Published: April 2023

Supplementary Table S2 showing DNA sequences of primers and probes used in the study
Supplementary Figures 1-8, Supplementary Materials and Methods from Epigenetic Silencing of BMP6 by the SIN3A–HDAC1/2 Repressor Complex Drives Melanoma Metastasis via FAM83G/PAWS1
Authors: Min Dongkook , Byun Jaemin , Lee Eun-Joon , Khan Abdul A. , Liu Christina , Loudig Oliver , Hu Wei , Zhao Yong , Herlyn Meenhard , Tycko Benjamin , Cole Phillip A. , Ryu Byungwoo
Published: April 2023

S1. Kaplan-Meier survival analysis of patients expressing high and low levels of BMP family genes. S2. Kaplan-Meier PFS analyses of cutaneous melanoma patients with BRAF-mutant and wild-type melanomas. S3. Kaplan-Meier OS analyses of cutaneous melanoma patients with BRAF-mutant and wild-type melanomas. S4. ChIP-PCR analysis demonstrating the binding of SIN3A-HDAC1/2 repressor complex in the proximal promoter regions of BMP1, BMP2 and BMP6 genes in 1205Lu melanoma cells. S5. Physiological changes of melanoma cells with stable expression of BMP6. S6. Establishment of mouse lung-specific metastatic melanoma cells for metastasis model generation. S7. Transcriptionally decreased FAM83G by BMP6 suppresses invasion capacity of melanoma cells via F-Actin deregulation. S8. Evaluation of functional roles of FAM83G in a metastasis model.
Supplementary Table from The Role of ARID1A in the Nonestrogenic Modulation of IGF-1 Signaling
Authors: Jdeed Sham , Erdős Edina , Bálint Bálint L. , Uray Iván P.
Published: April 2023

Supplementary Table from The Role of ARID1A in the Nonestrogenic Modulation of IGF-1 Signaling
Supplementary Data from PDZ Proteins SCRIB and DLG1 Regulate Myeloma Cell Surface CD86 Expression, Growth, and Survival
Authors: Moser-Katz Tyler , Gavile Catherine M. , Barwick Benjamin G. , Lee Kelvin P. , Boise Lawrence H.
Published: April 2023

Supplementary Data from PDZ Proteins SCRIB and DLG1 Regulate Myeloma Cell Surface CD86 Expression, Growth, and Survival
Supplementary Data from Bemcentinib and Gilteritinib Inhibit Cell Growth and Impair the Endo-Lysosomal and Autophagy Systems in an AXL-Independent Manner
Authors: Zdżalik-Bielecka Daria , Kozik Kamila , Poświata Agata , Jastrzębski Kamil , Jakubik Marta , Miączyńska Marta
Published: April 2023

Supplementary Data from Bemcentinib and Gilteritinib Inhibit Cell Growth and Impair the Endo-Lysosomal and Autophagy Systems in an AXL-Independent Manner
Supplementary Data from Mechanical Stress Signaling in Pancreatic Cancer Cells Triggers p38 MAPK- and JNK-Dependent Cytoskeleton Remodeling and Promotes Cell Migration via Rac1/cdc42/Myosin II
Authors: Kalli Maria , Li Ruxuan , Mills Gordon B. , Stylianopoulos Triantafyllos , Zervantonakis Ioannis K.
Published: April 2023

Supplementary Data from Mechanical Stress Signaling in Pancreatic Cancer Cells Triggers p38 MAPK- and JNK-Dependent Cytoskeleton Remodeling and Promotes Cell Migration via Rac1/cdc42/Myosin II
Supplementary Table from LncRNA A2M-AS1 Promotes Ferroptosis in Pancreatic Cancer via Interacting With PCBP3
Authors: Qiu Xin , Shi Qiuyue , Zhang Xianglian , Shi Xiaoyan , Jiang Haixing , Qin Shanyu
Published: April 2023

Supplementary Table from LncRNA A2M-AS1 Promotes Ferroptosis in Pancreatic Cancer via Interacting With PCBP3
Supplementary Figure from LncRNA A2M-AS1 Promotes Ferroptosis in Pancreatic Cancer via Interacting With PCBP3
Authors: Qiu Xin , Shi Qiuyue , Zhang Xianglian , Shi Xiaoyan , Jiang Haixing , Qin Shanyu
Published: April 2023

Supplementary Figure from LncRNA A2M-AS1 Promotes Ferroptosis in Pancreatic Cancer via Interacting With PCBP3
Supplementary Figure from A Hyaluronan and Proteoglycan Link Protein 1 Matrikine: Role of Matrix Metalloproteinase 2 in Multiple Myeloma NF-κB Activation and Drug Resistance
Authors: Mark Christina , Warrick Jay , Callander Natalie S. , Hematti Peiman , Miyamoto Shigeki
Published: April 2023

Supplementary Figure from A Hyaluronan and Proteoglycan Link Protein 1 Matrikine: Role of Matrix Metalloproteinase 2 in Multiple Myeloma NF-κB Activation and Drug Resistance
Supplementary Table from HMGN5 Escorts Oncogenic STAT3 Signaling by Regulating the Chromatin Landscape in Breast Cancer Tumorigenesis
Authors: Mou Jiahui , Huang Meijun , Wang Feifei , Xu Xiaoding , Xie Hanqi , Lu Henglei , Li Mingyang , Li Yu , Kong Weiwen , Chen Jing , Xiao Ying , Chen Yiding , Wang Chaochen , Ren Jin
Published: April 2023

Supplementary Table from HMGN5 Escorts Oncogenic STAT3 Signaling by Regulating the Chromatin Landscape in Breast Cancer Tumorigenesis
Supplementary Figure from HMGN5 Escorts Oncogenic STAT3 Signaling by Regulating the Chromatin Landscape in Breast Cancer Tumorigenesis
Authors: Mou Jiahui , Huang Meijun , Wang Feifei , Xu Xiaoding , Xie Hanqi , Lu Henglei , Li Mingyang , Li Yu , Kong Weiwen , Chen Jing , Xiao Ying , Chen Yiding , Wang Chaochen , Ren Jin
Published: April 2023

Supplementary Figure from HMGN5 Escorts Oncogenic STAT3 Signaling by Regulating the Chromatin Landscape in Breast Cancer Tumorigenesis
Supplementary Table from Blocking PI3K p110β Attenuates Development of PTEN-Deficient Castration-Resistant Prostate Cancer
Authors: Gao Xueliang , Wang Yubao , Ribeiro Caroline F. , Manokaran Cherubin , Chang Hyeyoun , Von Thanh , Rodrigues Silvia , Cizmecioglu Onur , Jia Shidong , Korpal Manav , Korn Joshua M. , Wang Zhigang , Schmit Fabienne , Jiang Lan , Pagliarini Raymond , Yang Yi , Sethi Isha , Signoretti Sabina , Yuan Guo-Cheng , Loda Massimo , Zhao Jean J. , Roberts Thomas M.
Published: April 2023

Supplementary Table from Blocking PI3K p110β Attenuates Development of PTEN-Deficient Castration-Resistant Prostate Cancer
Supplementary Data from GFI1 Cooperates with IKZF1/IKAROS to Activate Gene Expression in T-cell Acute Lymphoblastic Leukemia
Authors: Sun Wenxiang , Guo Jingtao , McClellan David , Poeschla Alexandra , Bareyan Diana , Casey Mattie J. , Cairns Bradley R. , Tantin Dean , Engel Michael E.
Published: April 2023

Supplementary Data from GFI1 Cooperates with IKZF1/IKAROS to Activate Gene Expression in T-cell Acute Lymphoblastic Leukemia
Supplementary Data from Exquisite Sensitivity to Dual BRG1/BRM ATPase Inhibitors Reveals Broad SWI/SNF Dependencies in Acute Myeloid Leukemia
Authors: Rago Florencia , Rodrigues Lindsey Ulkus , Bonney Megan , Sprouffske Kathleen , Kurth Esther , Elliott GiNell , Ambrose Jessi , Aspesi Peter , Oborski Justin , Chen Julie T. , McDonald E. Robert , Mapa Felipa A. , Ruddy David A. , Kauffmann Audrey , Abrams Tinya , Bhang Hyo-eun C. , Jagani Zainab
Published: April 2023

Supplementary Data from Exquisite Sensitivity to Dual BRG1/BRM ATPase Inhibitors Reveals Broad SWI/SNF Dependencies in Acute Myeloid Leukemia
Supplementary Table from Antizyme Inhibitor 1 Regulates Matrikine Expression and Enhances the Metastatic Potential of Aggressive Primary Prostate Cancer
Authors: Van den Broeck Thomas , Moris Lisa , Gevaert Thomas , Davicioni Elai , Boeckx Bram , Lambrechts Diether , Helsen Christine , Handle Florian , Ghesquière Bart , Soenen Stefaan , Smeets Elien , Eerlings Roy , El Kharraz Sarah , Devlies Wout , Karnes R. Jeffrey , Lotan Tamara , Van Poppel Hendrik , Joniau Steven , Claessens Frank
Published: April 2023

Supplementary Table from Antizyme Inhibitor 1 Regulates Matrikine Expression and Enhances the Metastatic Potential of Aggressive Primary Prostate Cancer
Supplementary Data from MALT1 Is a Targetable Driver of Epithelial-to-Mesenchymal Transition in Claudin-Low, Triple-Negative Breast Cancer
Authors: Lee Jia-Ying Lloyd , Ekambaram Prasanna , Carleton Neil M. , Hu Dong , Klei Linda R. , Cai Zongyou , Myers Max I. , Hubel Nathaniel E. , Covic Lidija , Agnihotri Sameer , Krappmann Daniel , Bornancin Frédéric , Lee Adrian V. , Oesterreich Steffi , McAllister-Lucas Linda M. , Lucas Peter C.
Published: April 2023

Supplementary Data from MALT1 Is a Targetable Driver of Epithelial-to-Mesenchymal Transition in Claudin-Low, Triple-Negative Breast Cancer
Supplementary Figure from Functional Characterization of lncRNA152 as an Angiogenesis-Inhibiting Tumor Suppressor in Triple-Negative Breast Cancers
Authors: Kim Dae-Seok , Camacho Cristel V. , Setlem Rohit , Kim Kangsan , Malladi Srinivas , Hou Tim Y. , Nandu Tulip , Gadad Shrikanth S. , Kraus W. Lee
Published: April 2023

Supplementary Figure from Functional Characterization of lncRNA152 as an Angiogenesis-Inhibiting Tumor Suppressor in Triple-Negative Breast Cancers
Table S3 from Hypertension Promotes the Proliferation and Migration of ccRCC Cells by Downregulation of TIMP3 in Tumor Endothelial Cells through the miR-21–5p/TGFBR2/P38/EGR1 Axis
Authors: Wang Chenguang , Xu Haibo , Liao Xinhui , Wang Weiming , Wu Wanjun , Li Wujiao , Niu Liman , Li Zhichao , Li Aolin , Sun Yangyang , Huang Weiren , Song Fei
Published: April 2023

Differentially expressed genes between ccRCC patients with normal blood pressure and hypertension in bulk RNA-seq (A) and scRNA-seq (B), and Genes with higher expression levels in endothelial cells than other cells (C)
Supplementary Table S4 from BAP1 Loss Is Associated with Higher ASS1 Expression in Epithelioid Mesothelioma: Implications for Therapeutic Stratification
Authors: Barnett Sarah E. , Kenyani Jenna , Tripari Martina , Butt Zohra , Grosman Rudi , Querques Francesca , Shaw Liam , Silva Luisa C. , Goate Zoe , Marciniak Stefan J. , Rassl Doris M. , Jackson Richard , Lian Lu-Yun , Szlosarek Peter W. , Sacco Joseph J. , Coulson Judy M.
Published: April 2023

Metabolomics MeT5A isogenics
Supplementary Table S3 from BAP1 Loss Is Associated with Higher ASS1 Expression in Epithelioid Mesothelioma: Implications for Therapeutic Stratification
Authors: Barnett Sarah E. , Kenyani Jenna , Tripari Martina , Butt Zohra , Grosman Rudi , Querques Francesca , Shaw Liam , Silva Luisa C. , Goate Zoe , Marciniak Stefan J. , Rassl Doris M. , Jackson Richard , Lian Lu-Yun , Szlosarek Peter W. , Sacco Joseph J. , Coulson Judy M.
Published: April 2023

Proteomics MeT5A isogenics and MPM cell lines
Supplementary Table S2 from BAP1 Loss Is Associated with Higher ASS1 Expression in Epithelioid Mesothelioma: Implications for Therapeutic Stratification
Authors: Barnett Sarah E. , Kenyani Jenna , Tripari Martina , Butt Zohra , Grosman Rudi , Querques Francesca , Shaw Liam , Silva Luisa C. , Goate Zoe , Marciniak Stefan J. , Rassl Doris M. , Jackson Richard , Lian Lu-Yun , Szlosarek Peter W. , Sacco Joseph J. , Coulson Judy M.
Published: April 2023

WGS MeT5A isogenics
Supplementary Methods and References from BAP1 Loss Is Associated with Higher ASS1 Expression in Epithelioid Mesothelioma: Implications for Therapeutic Stratification
Authors: Barnett Sarah E. , Kenyani Jenna , Tripari Martina , Butt Zohra , Grosman Rudi , Querques Francesca , Shaw Liam , Silva Luisa C. , Goate Zoe , Marciniak Stefan J. , Rassl Doris M. , Jackson Richard , Lian Lu-Yun , Szlosarek Peter W. , Sacco Joseph J. , Coulson Judy M.
Published: April 2023

Supplementary Methods, References and List of Figures and Tables
Supplementary Figures 1-4 from MYC/Glutamine Dependency Is a Therapeutic Vulnerability in Pancreatic Cancer with Deoxycytidine Kinase Inactivation-Induced Gemcitabine Resistance
Authors: Dash Suman , Ueda Takeshi , Komuro Akiyoshi , Amano Hisayuki , Honda Masahiko , Kawazu Masahito , Okada Hitoshi
Published: April 2023

S1. Supplementary results corresponding to Figures 1 and 2S2. Supplementary results corresponding to Figure 2Cas9-sgRNA-mediated genome editing in the DCK gene detected using direct sequenceS3. Supplementary results corresponding to Figure 2S4. Supplementary results corresponding to Figure 4
Video 4 from Autocrine Fibronectin Inhibits Breast Cancer Metastasis
Authors: Shinde Aparna , Libring Sarah , Alpsoy Aktan , Abdullah Ammara , Schaber James A. , Solorio Luis , Wendt Michael K.
Published: April 2023

Ca1h cells depleted for FN (shFN30) fail to form any fibrillar strains when cultured on our 3D culture scaffold.
Video 1 from Autocrine Fibronectin Inhibits Breast Cancer Metastasis
Authors: Shinde Aparna , Libring Sarah , Alpsoy Aktan , Abdullah Ammara , Schaber James A. , Solorio Luis , Wendt Michael K.
Published: April 2023

Ca1a cells (labeled by d-tomato) can migrate and proliferate on FN-fibrils.
Perspective on this Article from Serum Insulin-like Growth Factor-I and Mammary Tumor Development in Ad libitum–Fed, Chronic Calorie–Restricted, and Intermittent Calorie–Restricted MMTV-TGF-α Mice
Authors: Rogozina Olga P. , Bonorden Melissa J.L. , Grande Joseph P. , Cleary Margot P.
Published: April 2023

Perspective on this Article from Serum Insulin-like Growth Factor-I and Mammary Tumor Development in Ad libitum–Fed, Chronic Calorie–Restricted, and Intermittent Calorie–Restricted MMTV-TGF-α Mice
Perspective on this Article from Cruciferous Vegetable Feeding Alters UGT1A1 Activity: Diet- and Genotype-Dependent Changes in Serum Bilirubin in a Controlled Feeding Trial
Authors: Navarro Sandi L. , Peterson Sabrina , Chen Chu , Makar Karen W. , Schwarz Yvonne , King Irena B. , Li Shuying S. , Li Lin , Kestin Mark , Lampe Johanna W.
Published: April 2023

Perspective on this Article from Cruciferous Vegetable Feeding Alters UGT1A1 Activity: Diet- and Genotype-Dependent Changes in Serum Bilirubin in a Controlled Feeding Trial
Supplementary Figure 1 from Lack of Evidence for Green Tea Polyphenols as DNA Methylation Inhibitors in Murine Prostate
Authors: Morey Kinney Shannon R. , Zhang Wa , Pascual Marien , Greally John M. , Gillard Bryan M. , Karasik Ellen , Foster Barbara A. , Karpf Adam R.
Published: April 2023

Supplementary Figure 1 from Lack of Evidence for Green Tea Polyphenols as DNA Methylation Inhibitors in Murine Prostate
Supplementary Fig 1D from Single Nucleotide Polymorphism–Based Genome-Wide Chromosome Copy Change, Loss of Heterozygosity, and Aneuploidy in Barrett's Esophagus Neoplastic Progression
Authors: Li Xiaohong , Galipeau Patricia C. , Sanchez Carissa A. , Blount Patricia L. , Maley Carlo C. , Arnaudo Jessica , Peiffer Daniel A. , Pokholok Dmitry , Gunderson Kevin L. , Reid Brian J.
Published: April 2023

Supplementary Fig 1D from Single Nucleotide Polymorphism–Based Genome-Wide Chromosome Copy Change, Loss of Heterozygosity, and Aneuploidy in Barrett's Esophagus Neoplastic Progression
Supplementary Tables 1 - 6 from Chemoprevention Activity of Dipyridamole in the MMTV-PyMT Transgenic Mouse Model of Breast Cancer
Authors: Wang Chunmei , Schwab Luciana P. , Fan Meiyun , Seagroves Tiffany N. , Buolamwini John K.
Published: April 2023

PDF file - 119K, Table 1A. Genes enriched as over-expressed in DPM treatment group Table 1B. Genes enriched as under-expressed in DPM treatment group Table 2A. Functional enrichment (based on GO Biological Process) of genes over-expressed in DPM treatment group using DAVID. Table 2B. Functional enrichment (based on GO Biological Process) of genes under-expressed in DPM treatment group using DAVID. Table 3. Cell growth, proliferation and migration related functions of those genes differentially-enriched in the DPM treatment group Table 4. Comparison of gene expression fold changes between microarray and qPCR. Table 5. Differentially expressed miRNAs in DPM treatment group
Supplementary Methods, Figure Legend from Chemoprevention Activity of Dipyridamole in the MMTV-PyMT Transgenic Mouse Model of Breast Cancer
Authors: Wang Chunmei , Schwab Luciana P. , Fan Meiyun , Seagroves Tiffany N. , Buolamwini John K.
Published: April 2023

PDF file - 164K, Preclinical chemoprevention experimental design
Supplementary Figures 1 - 4 from Chemoprevention Activity of Dipyridamole in the MMTV-PyMT Transgenic Mouse Model of Breast Cancer
Authors: Wang Chunmei , Schwab Luciana P. , Fan Meiyun , Seagroves Tiffany N. , Buolamwini John K.
Published: April 2023

PDF file - 292K, Supplementary Figure 1: Structure of DPM and H&E-stained end stage tumor sections. Supplementary Figure 2: No gross changes in cellular proliferation, apoptosis or microvessel density are observed in end stage tumors in response to DPM therapy. Supplementary Figure 3: DPM treatment does not maintain expression of ER in late stage carcinomas. Supplementary Figure 4: DPM treatment does not reduce the expression of the PyMT transgene in tumors.
Related Article from Macronutrient Intake and Cancer: How Does Dietary Restriction Influence Tumor Growth and Why Should We Care?
Authors: Pollak Michael
Published: April 2023

Related Article from Macronutrient Intake and Cancer: How Does Dietary Restriction Influence Tumor Growth and Why Should We Care?
Supplementary Figure 1 from Aerosolized 3-Bromopyruvate Inhibits Lung Tumorigenesis without Causing Liver Toxicity
Authors: Zhang Qi , Pan Jing , North Paula E. , Yang Shoua , Lubet Ronald A. , Wang Yian , You Ming
Published: April 2023

PDF file - 64K
Supplementary Table 1 from Direct Targeting of MEK1/2 and RSK2 by Silybin Induces Cell-Cycle Arrest and Inhibits Melanoma Cell Growth
Authors: Lee Mee-Hyun , Huang Zunnan , Kim Dong Joon , Kim Sung-Hyun , Kim Myoung Ok , Lee Sung-Young , Xie Hua , Park Si Jun , Kim Jae Young , Kundu Joydeb Kumar , Bode Ann M. , Surh Young-Joon , Dong Zigang
Published: April 2023

PDF file - 31K
Related Article from Oropharyngeal Cancer, Race, and the Human Papillomavirus
Authors: Brawley Otis W.
Published: April 2023

Related Article from Oropharyngeal Cancer, Race, and the Human Papillomavirus
Supplementary Table 2 from Dietary Tricin Suppresses Inflammation-Related Colon Carcinogenesis in Male Crj: CD-1 Mice
Authors: Oyama Takeru , Yasui Yumiko , Sugie Shigeyuki , Koketsu Mamoru , Watanabe Kunitomo , Tanaka Takuji
Published: April 2023

Supplementary Table 2 from Dietary Tricin Suppresses Inflammation-Related Colon Carcinogenesis in Male Crj: CD-1 Mice
Supplementary Tables 1-6 from A Model of Gene-Environment Interaction Reveals Altered Mammary Gland Gene Expression and Increased Tumor Growth following Social Isolation
Authors: Williams J. Bradley , Pang Diana , Delgado Bertha , Kocherginsky Masha , Tretiakova Maria , Krausz Thomas , Pan Deng , He Jane , McClintock Martha K. , Conzen Suzanne D.
Published: April 2023

Supplementary Tables 1-6 from A Model of Gene-Environment Interaction Reveals Altered Mammary Gland Gene Expression and Increased Tumor Growth following Social Isolation
Supplementary Figure 2 from Identification of Actively Translated mRNA Transcripts in a Rat Model of Early-Stage Colon Carcinogenesis
Authors: Davidson Laurie A. , Wang Naisyin , Ivanov Ivan , Goldsby Jennifer , Lupton Joanne R. , Chapkin Robert S.
Published: April 2023

Supplementary Figure 2 from Identification of Actively Translated mRNA Transcripts in a Rat Model of Early-Stage Colon Carcinogenesis
Supplementary Figure 1 from Phase IB Randomized, Double-Blinded, Placebo-Controlled, Dose Escalation Study of Polyphenon E in Women with Hormone Receptor–Negative Breast Cancer
Authors: Crew Katherine D. , Brown Powel , Greenlee Heather , Bevers Therese B. , Arun Banu , Hudis Clifford , McArthur Heather L. , Chang Jenny , Rimawi Mothaffar , Vornik Lana , Cornelison Terri L. , Wang Antai , Hibshoosh Hanina , Ahmed Aqeel , Terry Mary Beth , Santella Regina M. , Lippman Scott M. , Hershman Dawn L.
Published: April 2023

PDF file, 117K, Supplementary figure with graphical representations of biomarker data (total tea polyphenols, Ki-67, ER, mammographic density).
Perspective on this Article from Effects of Physical Activity and Restricted Energy Intake on Chemically Induced Mammary Carcinogenesis
Authors: Jiang Weiqin , Zhu Zongjian , Thompson Henry J.
Published: April 2023

Perspective on this Article from Effects of Physical Activity and Restricted Energy Intake on Chemically Induced Mammary Carcinogenesis
Perspective from Difluoromethylornithine Plus Sulindac for the Prevention of Sporadic Colorectal Adenomas: A Randomized Placebo-Controlled, Double-Blind Trial
Authors: Meyskens Frank L. , McLaren Christine E. , Pelot Daniel , Fujikawa-Brooks Sharon , Carpenter Philip M. , Hawk Ernest , Kelloff Gary , Lawson Michael J. , Kidao Jayashri , McCracken John , Albers C. Gregory , Ahnen Dennis J. , Turgeon D. Kim , Goldschmid Steven , Lance Peter , Hagedorn Curt H. , Gillen Daniel L. , Gerner Eugene W.
Published: April 2023

Perspective from Difluoromethylornithine Plus Sulindac for the Prevention of Sporadic Colorectal Adenomas: A Randomized Placebo-Controlled, Double-Blind Trial
Related Article from Viewing the Epigenetics of Colorectal Cancer through the Window of Folic Acid Effects
Authors: van Engeland Manon , Herman James G.
Published: April 2023

Related Article from Viewing the Epigenetics of Colorectal Cancer through the Window of Folic Acid Effects
Supplementary Table 1 from Caffeic Acid Phenethyl Ester Suppresses the Proliferation of Human Prostate Cancer Cells through Inhibition of p70S6K and Akt Signaling Networks
Authors: Chuu Chih-Pin , Lin Hui-Ping , Ciaccio Mark F. , Kokontis John M. , Hause Ronald J. , Hiipakka Richard A. , Liao Shutsung , Jones Richard Baker
Published: April 2023

XLS file - 274K, This file contains data from the PCR Array gene expression analysis
Perspective from Impact of Smoking Cessation on Global Gene Expression in the Bronchial Epithelium of Chronic Smokers
Authors: Zhang Li , Lee J. Jack , Tang Hongli , Fan You-Hong , Xiao Lianchun , Ren Hening , Kurie Jonathan , Morice Rodolfo C. , Hong Waun Ki , Mao Li
Published: April 2023

Perspective from Impact of Smoking Cessation on Global Gene Expression in the Bronchial Epithelium of Chronic Smokers
Supplementary Figures 1-2 from The Synthetic Triterpenoid CDDO-Methyl Ester Delays Estrogen Receptor–Negative Mammary Carcinogenesis in Polyoma Middle T Mice
Authors: Tran Kim , Risingsong Renee , Royce Darlene , Williams Charlotte R. , Sporn Michael B. , Liby Karen
Published: April 2023

PDF file - 298K
Supplementary Figure Legends 1-2 from The Synthetic Triterpenoid CDDO-Methyl Ester Delays Estrogen Receptor–Negative Mammary Carcinogenesis in Polyoma Middle T Mice
Authors: Tran Kim , Risingsong Renee , Royce Darlene , Williams Charlotte R. , Sporn Michael B. , Liby Karen
Published: April 2023

PDF file - 47K
Supplemental Table 4 from Multiple Aberrations of Chromosome 3p Detected in Oral Premalignant Lesions
Authors: Tsui Ivy F.L. , Rosin Miriam P. , Zhang Lewei , Ng Raymond T. , Lam Wan L.
Published: April 2023

Supplemental Table 4 from Multiple Aberrations of Chromosome 3p Detected in Oral Premalignant Lesions
Supplementary Table 3 from Allelic Transcripts Dosage Effect in Morphologically Normal Ovarian Cells from Heterozygous Carriers of a BRCA1/2 French Canadian Founder Mutation
Authors: Abd-Rabbo Diala , Abaji Christine , Cardin Guillaume B. , Filali-Mouhim Abdelali , Arous Caroline , Portelance Lise , Escobar Enrique , Cloutier Sophie , Tonin Patricia N. , Provencher Diane M. , Mes-Masson Anne-Marie , Maugard Christine M.
Published: April 2023

PDF file - 99K, Common genes between our results and published inherited ovarian literature
Supplemental Fig 3 from Multiple Aberrations of Chromosome 3p Detected in Oral Premalignant Lesions
Authors: Tsui Ivy F.L. , Rosin Miriam P. , Zhang Lewei , Ng Raymond T. , Lam Wan L.
Published: April 2023

Supplemental Fig 3 from Multiple Aberrations of Chromosome 3p Detected in Oral Premalignant Lesions
Supplementary Table 1D from Allelic Transcripts Dosage Effect in Morphologically Normal Ovarian Cells from Heterozygous Carriers of a BRCA1/2 French Canadian Founder Mutation
Authors: Abd-Rabbo Diala , Abaji Christine , Cardin Guillaume B. , Filali-Mouhim Abdelali , Arous Caroline , Portelance Lise , Escobar Enrique , Cloutier Sophie , Tonin Patricia N. , Provencher Diane M. , Mes-Masson Anne-Marie , Maugard Christine M.
Published: April 2023

PDF file - 177K, Molecular signature associated to the tumor transformation from NOSEs to TOVs in BRCA1-mutated samples
Supplemental Fig 1 from Multiple Aberrations of Chromosome 3p Detected in Oral Premalignant Lesions
Authors: Tsui Ivy F.L. , Rosin Miriam P. , Zhang Lewei , Ng Raymond T. , Lam Wan L.
Published: April 2023

Supplemental Fig 1 from Multiple Aberrations of Chromosome 3p Detected in Oral Premalignant Lesions
Supplementary Table 1A-B from Allelic Transcripts Dosage Effect in Morphologically Normal Ovarian Cells from Heterozygous Carriers of a BRCA1/2 French Canadian Founder Mutation
Authors: Abd-Rabbo Diala , Abaji Christine , Cardin Guillaume B. , Filali-Mouhim Abdelali , Arous Caroline , Portelance Lise , Escobar Enrique , Cloutier Sophie , Tonin Patricia N. , Provencher Diane M. , Mes-Masson Anne-Marie , Maugard Christine M.
Published: April 2023

PDF file - 92K, Supplementary Table 1a. Molecular profile associated to a BRCA1 mutation in NOSEs Supplementary Table 1b. Molecular profile associated to a BRCA2 mutation in NOSEs
Supplementary Tables from Metabolic Syndrome and Mammographic Density in Mexican Women
Authors: Rice Megan S. , Biessy Carine , Lajous Martin , Bertrand Kimberly A. , Tamimi Rulla M. , Torres-Mejía Gabriela , López-Ridaura Ruy , Romieu Isabelle
Published: April 2023

Supplementary Tables 1-4 - PDF file 94K, Difference in dense area (cm2) (95%confidence interval) on mammogram by metabolic syndrome status and components of metabolic syndrome among premenopausal women by state (EsMaestras, 2006)
Supplementary Figure 1 from Curcumin Suppresses Proliferation of Colon Cancer Cells by Targeting CDK2
Authors: Lim Tae-Gyu , Lee Sung-Young , Huang Zunnan , Lim Do Young , Chen Hanyong , Jung Sung Keun , Bode Ann M. , Lee Ki Won , Dong Zigang
Published: April 2023

PDF file - 259KB, Curcumin inhibits CDK2 kinase activity ex vivo. After immunoprecipitation of the CDK2 proteins from HCT116 cell lysates using a specific CDK2 antibody, the effect of curcumin on CDK2 kinase activity was measured. Data are represented as means plus-minus S.D. as determined from 3 independent experiments and the asterisk (*) indicates a significant (p < 0.001) difference compared to untreated cell lysate group.
Related Article from Curcumin Chemoprevention: The Long Road to Clinical Translation
Authors: Shureiqi Imad , Baron John A.
Published: April 2023

Related Article from Curcumin Chemoprevention: The Long Road to Clinical Translation
Perspective on this Article from A Phase 2a Study of Topical Perillyl Alcohol Cream for Chemoprevention of Skin Cancer
Authors: Stratton Steven P. , Alberts David S. , Einspahr Janine G. , Sagerman Paul M. , Warneke James A. , Curiel-Lewandrowski Clara , Myrdal Paul B. , Karlage Kelly L. , Nickoloff Brian J. , Brooks Chris , Saboda Kathylynn , Yozwiak Michael L. , Krutzsch Mary F. , Hu Chengcheng , Lluria-Prevatt Maria , Dong Zigang , Bowden G. Timothy , Bartels Peter H.
Published: April 2023

Perspective on this Article from A Phase 2a Study of Topical Perillyl Alcohol Cream for Chemoprevention of Skin Cancer
Supplementary Methods from DNA Methylation of Phosphatase and Actin Regulator 3 Detects Colorectal Cancer in Stool and Complements FIT
Authors: Bosch Linda J.W. , Oort Frank A. , Neerincx Maarten , Khalid-de Bakker Carolina A.J. , sive Droste Jochim S. Terhaar , Melotte Veerle , Jonkers Daisy M.A.E. , Masclee Ad A.M. , Mongera Sandra , Grooteclaes Madeleine , Louwagie Joost , van Criekinge Wim , Coupé Veerle M.H. , Mulder Chris J. , van Engeland Manon , Carvalho Beatriz , Meijer Gerrit A.
Published: April 2023

PDF file - 118K
Supplementary Table 4 from Ultrasensitive Detection of Unknown Colon Cancer-Initiating Mutations Using the Example of the Adenomatous Polyposis Coli Gene
Authors: Gerecke Christian , Mascher Conny , Gottschalk Uwe , Kleuser Burkhard , Scholtka Bettina
Published: April 2023

PDF - 71K, KRAS mutation analysis by WTB-HRM of human colon tissue specimens and control sequencing of HRM products.
Supplementary Table 2 from Characterization of the Methylation Patterns in Human Papillomavirus Type 16 Viral DNA in Head and Neck Cancers
Authors: Park Il-Seok , Chang Xiaofei , Loyo Myriam , Wu Gaosong , Chuang Alice , Kim Myoung Sook , Chae Young Kwang , Lyford-Pike Sofia , Westra William H. , Saunders John R. , Sidransky David , Pai Sara Isabel
Published: April 2023

Supplementary Table 2 from Characterization of the Methylation Patterns in Human Papillomavirus Type 16 Viral DNA in Head and Neck Cancers
Supplementary Table 2 from Ultrasensitive Detection of Unknown Colon Cancer-Initiating Mutations Using the Example of the Adenomatous Polyposis Coli Gene
Authors: Gerecke Christian , Mascher Conny , Gottschalk Uwe , Kleuser Burkhard , Scholtka Bettina
Published: April 2023

PDF - 35K, Oligonucleotide primers used for High Resolution Melting analysis.
Supplementary Figure 2 from Characterization of the Methylation Patterns in Human Papillomavirus Type 16 Viral DNA in Head and Neck Cancers
Authors: Park Il-Seok , Chang Xiaofei , Loyo Myriam , Wu Gaosong , Chuang Alice , Kim Myoung Sook , Chae Young Kwang , Lyford-Pike Sofia , Westra William H. , Saunders John R. , Sidransky David , Pai Sara Isabel
Published: April 2023

Supplementary Figure 2 from Characterization of the Methylation Patterns in Human Papillomavirus Type 16 Viral DNA in Head and Neck Cancers
Supplementary Methods, Figure Legends 1-3, Table Legend 1 from N-nitroso-tris-chloroethylurea Induces Premalignant Squamous Dysplasia in Mice
Authors: Hudish Tyler M. , Opincariu Laura I. , Mozer Anthony B. , Johnson Micah S. , Cleaver Timothy G. , Malkoski Stephen P. , Merrick Daniel T. , Keith Robert L.
Published: April 2023

PDF file - 69K
Supplementary Methods from A Derivative of Chrysin Suppresses Two-Stage Skin Carcinogenesis by Inhibiting Mitogen- and Stress-Activated Kinase 1
Authors: Liu Haidan , Hwang Joonsung , Li Wei , Choi Tae Woong , Liu Kangdong , Huang Zunnan , Jang Jae-Hyuk , Thimmegowda N.R. , Lee Ki Won , Ryoo In-Ja , Ahn Jong-Seog , Bode Ann M. , Zhou Xinmin , Yang Yifeng , Erikson Raymond L. , Kim Bo-Yeon , Dong Zigang
Published: April 2023

PDF file - 766K
Supplementary Figure 4 from A Derivative of Chrysin Suppresses Two-Stage Skin Carcinogenesis by Inhibiting Mitogen- and Stress-Activated Kinase 1
Authors: Liu Haidan , Hwang Joonsung , Li Wei , Choi Tae Woong , Liu Kangdong , Huang Zunnan , Jang Jae-Hyuk , Thimmegowda N.R. , Lee Ki Won , Ryoo In-Ja , Ahn Jong-Seog , Bode Ann M. , Zhou Xinmin , Yang Yifeng , Erikson Raymond L. , Kim Bo-Yeon , Dong Zigang
Published: April 2023

PDF file - 136K, Effect of different doses of compound 69407 on TPA-promoted skin carcinogenesis in mice.
Supplementary Table S3 from Association of Prostate Cancer Risk Loci with Disease Aggressiveness and Prostate Cancer–Specific Mortality
Authors: Pomerantz Mark M. , Werner Lillian , Xie Wanling , Regan Meredith M. , Lee Gwo-Shu Mary , Sun Tong , Evan Carolyn , Petrozziello Gillian , Nakabayashi Mari , Oh William K. , Kantoff Philip W. , Freedman Matthew L.
Published: April 2023

Supplementary Table S3 from Association of Prostate Cancer Risk Loci with Disease Aggressiveness and Prostate Cancer–Specific Mortality
Supplementary Table S2 from Association of Prostate Cancer Risk Loci with Disease Aggressiveness and Prostate Cancer–Specific Mortality
Authors: Pomerantz Mark M. , Werner Lillian , Xie Wanling , Regan Meredith M. , Lee Gwo-Shu Mary , Sun Tong , Evan Carolyn , Petrozziello Gillian , Nakabayashi Mari , Oh William K. , Kantoff Philip W. , Freedman Matthew L.
Published: April 2023

Supplementary Table S2 from Association of Prostate Cancer Risk Loci with Disease Aggressiveness and Prostate Cancer–Specific Mortality
Perspective on this Article from Loss of Inhibitory Insulin Receptor Substrate-1 Phosphorylation Is an Early Event in Mammalian Target of Rapamycin–Dependent Endometrial Hyperplasia and Carcinoma
Authors: McCampbell Adrienne S. , Harris Heather A. , Crabtree Judy S. , Winneker Richard C. , Walker Cheryl L. , Broaddus Russell R.
Published: April 2023

Perspective on this Article from Loss of Inhibitory Insulin Receptor Substrate-1 Phosphorylation Is an Early Event in Mammalian Target of Rapamycin–Dependent Endometrial Hyperplasia and Carcinoma
Related Articles / Press Coverage from Metformin Suppresses Colorectal Aberrant Crypt Foci in a Short-term Clinical Trial
Authors: Hosono Kunihiro , Endo Hiroki , Takahashi Hirokazu , Sugiyama Michiko , Sakai Eiji , Uchiyama Takashi , Suzuki Kaori , Iida Hiroshi , Sakamoto Yasunari , Yoneda Kyoko , Koide Tomoko , Tokoro Chikako , Abe Yasunobu , Inamori Masahiko , Nakagama Hitoshi , Nakajima Atsushi
Published: April 2023

Related Articles / Press Coverage from Metformin Suppresses Colorectal Aberrant Crypt Foci in a Short-term Clinical Trial
Supplementary Table from Estrogen and Cytochrome P450 1B1 Contribute to Both Early- and Late-Stage Head and Neck Carcinogenesis
Authors: Shatalova Ekaterina G. , Klein-Szanto Andres J.P. , Devarajan Karthik , Cukierman Edna , Clapper Margie L.
Published: April 2023

Supplementary Table from Estrogen and Cytochrome P450 1B1 Contribute to Both Early- and Late-Stage Head and Neck Carcinogenesis
Supplementary Figure 2 from ALDH1A1 Is a Novel EZH2 Target Gene in Epithelial Ovarian Cancer Identified by Genome-Wide Approaches
Authors: Li Hua , Bitler Benjamin G. , Vathipadiekal Vinod , Maradeo Marie E. , Slifker Michael , Creasy Caretha L. , Tummino Peter J. , Cairns Paul , Birrer Michael J. , Zhang Rugang
Published: April 2023

PDF file - 138K
Supplementary Figure 1 from Resveratrol Suppresses Colitis and Colon Cancer Associated with Colitis
Authors: Cui Xiangli , Jin Yu , Hofseth Anne B. , Pena Edsel , Habiger Joshua , Chumanevich Alexander , Poudyal Deepak , Nagarkatti Mitzi , Nagarkatti Prakash S. , Singh Udai P. , Hofseth Lorne J.
Published: April 2023

Supplementary Figure 1 from Resveratrol Suppresses Colitis and Colon Cancer Associated with Colitis
Supplementary Table S1 and Figure legends from Sarsaparilla (Smilax Glabra Rhizome) Extract Inhibits Cancer Cell Growth by S Phase Arrest, Apoptosis, and Autophagy via Redox-Dependent ERK1/2 Pathway
Authors: She Tiantian , Qu Like , Wang Lixin , Yang Xingxin , Xu Shuo , Feng Junnan , Gao Yujing , Zhao Chuanke , Han Yong , Cai Shaoqing , Shou Chengchao
Published: April 2023

Supplementary Table S1 and Figure legends. Supplementary Table S1 of primer sequences and Figure legends for Figure S1-S5.
Supplementary Figures 1 - 2 from KAVA Chalcone, Flavokawain A, Inhibits Urothelial Tumorigenesis in the UPII-SV40T Transgenic Mouse Model
Authors: Liu Zhongbo , Xu Xia , Li Xuesen , Liu Shuman , Simoneau Anne R. , He Feng , Wu Xue-Ru , Zi Xiaolin
Published: April 2023

PDF file - 63K, The majority of female UPII-SV40T mice survive beyond 318 days of age, and There is no significant difference in average food consumpation between vehicle control and FKA treatment groups.
Supplementary Figure 1 from Physical Activity Is Associated with Reduced Risk of Gastric Cancer: A Systematic Review and Meta-analysis
Authors: Singh Siddharth , Varayil Jithinraj Edakkanambeth , Devanna Swapna , Murad Mohammad Hassan , Iyer Prasad G.
Published: April 2023

PDF file - 13K, This figure shows the funnel plot for publication bias
Supplementary Figure 4 from Roles of Keap1–Nrf2 System in Upper Aerodigestive Tract Carcinogenesis
Authors: Ohkoshi Akira , Suzuki Takafumi , Ono Masao , Kobayashi Toshimitsu , Yamamoto Masayuki
Published: April 2023

PDF file - 1529K, The toxicity of 4NQO
Supplementary Figure 1 from Roles of Keap1–Nrf2 System in Upper Aerodigestive Tract Carcinogenesis
Authors: Ohkoshi Akira , Suzuki Takafumi , Ono Masao , Kobayashi Toshimitsu , Yamamoto Masayuki
Published: April 2023

PDF file - 1357K, Representative hematoxylin-eosin-stained sections of esophageal tumors after experiments with 4NQO
Supplementary Table 1 from Chemoprevention of Esophageal Cancer with Black Raspberries, Their Component Anthocyanins, and a Major Anthocyanin Metabolite, Protocatechuic Acid
Authors: Peiffer Daniel S. , Zimmerman Noah P. , Wang Li-Shu , Ransom Benjamin W.S. , Carmella Steven G. , Kuo Chieh-Ti , Siddiqui Jibran , Chen Jo-Hsin , Oshima Kiyoko , Huang Yi-Wen , Hecht Stephen S. , Stoner Gary D.
Published: April 2023

PDF file - 52KB, This table includes the primer sequences used for the qPCR analysis done in this study.
Supplementary Figure 2 from DNA Damage Drives an Activin A–Dependent Induction of Cyclooxygenase-2 in Premalignant Cells and Lesions
Authors: Fordyce Colleen , Fessenden Tim , Pickering Curtis , Jung Jason , Singla Veena , Berman Hal , Tlsty Thea
Published: April 2023

Supplementary Figure 2 from DNA Damage Drives an Activin A–Dependent Induction of Cyclooxygenase-2 in Premalignant Cells and Lesions
Related Article from Inflammatory Talk: Linking Obesity, NF-κB, and Aromatase
Authors: Hursting Stephen D.
Published: April 2023

Related Article from Inflammatory Talk: Linking Obesity, NF-κB, and Aromatase
Legend from Five-Year Cervical (Pre)Cancer Risk of Women Screened by HPV and Cytology Testing
Authors: Uijterwaal Margot H. , Polman Nicole J. , Van Kemenade Folkert J. , Van Den Haselkamp Sander , Witte Birgit I. , Rijkaart Dorien , Berkhof Johannes , Snijders Peter J.F. , Meijer Chris J.L.M.
Published: April 2023

Legend: CIN=cervical intraepithelial neoplasia (grade 3 or higher); HPV=human papillomavirus; BMD=borderline/mild dyskaryosis.
Supplementary Gene List from Dietary Methyl Donor Depletion Protects Against Intestinal Tumorigenesis in ApcMin/+ Mice
Authors: Kadaveru Krishna , Protiva Petr , Greenspan Emily J. , Kim Young-In , Rosenberg Daniel W.
Published: April 2023

XLS file - 307K
Supplementary Figure 1 from Dietary Methyl Donor Depletion Protects Against Intestinal Tumorigenesis in ApcMin/+ Mice
Authors: Kadaveru Krishna , Protiva Petr , Greenspan Emily J. , Kim Young-In , Rosenberg Daniel W.
Published: April 2023

PDF file - 42K, Body weight changes in ApcMin/+ mice maintained for 6 weeks on MDS or MDD diet (Study 1). Beginning at 10 weeks of age, mice were placed on MDS or MDD diets. Body weights were recorded weekly during the entire experimental period. Each data point represents the average body weight � SEM for Group III (n=5) and Group IV (n=8). Note that at the end of the study, there was an ~ 40% reduction in body weight in mice maintained on the MDD diet.
Perspective on This Article from Rapamycin Is a Potent Inhibitor of Skin Tumor Promotion by 12-O-Tetradecanoylphorbol-13-Acetate
Authors: Checkley L. Allyson , Rho Okkyung , Moore Tricia , Hursting Steve , DiGiovanni John
Published: April 2023

Perspective on This Article from Rapamycin Is a Potent Inhibitor of Skin Tumor Promotion by 12-O-Tetradecanoylphorbol-13-Acetate
Perspective on This Article from Metformin Prevents Liver Tumorigenesis by Inhibiting Pathways Driving Hepatic Lipogenesis
Authors: Bhalla Kavita , Hwang Bor Jang , Dewi Ruby E. , Twaddel William , Goloubeva Olga G. , Wong Kwok-Kin , Saxena Neeraj K. , Biswal Shyam , Girnun Geoffrey D.
Published: April 2023

Perspective on This Article from Metformin Prevents Liver Tumorigenesis by Inhibiting Pathways Driving Hepatic Lipogenesis
Supplementary Figure 2 from Genistein Protects Hematopoietic Stem Cells against G-CSF–Induced DNA Damage
Authors: Souza Liliana R. , Silva Erica , Calloway Elissa , Kucuk Omer , Rossi Michael , McLemore Morgan L.
Published: April 2023

PDF file - 360KB, Effect of genistein on LSK-SLAM proliferation in mice treated with G-CSF. C57BL/6 mice (n = 3/group, 4 groups) were given 3 intraperitoneal injections of BrdU (3 mg/24 hours) in PBS and maintained on 0.2 mg/mL of BrdU in the drinking water for 72 hours with concomitant injection of diluents, genistein, G-CSF or genistein + G-CSF. A)Gating strategy to analyze BrdU incorporation into HSC from mouse BM. B)Percentage of BrdU incorporation into LSK-SLAM a = p<0.05 vs. diluents; b = p<0.05 vs. G-CSF. Error bars represent the mean +/- SD of 4 mice/group.
Supplementary Table 1 from Concordant Effects of Aromatase Inhibitors on Gene Expression in ER+ Rat and Human Mammary Cancers and Modulation of the Proteins Coded by These Genes
Authors: Lu Yan , You Ming , Ghazoui Zara , Liu Pengyuan , Vedell Peter T. , Wen Weidong , Bode Ann M. , Grubbs Clinton J. , Lubet Ronald A.
Published: April 2023

XLSX file - 87K, Gene Expression Changes Comparing Control Rat Tumors and Rat Tumors Treated with Vorozole
Supplementary Figure Legends from A Dietary Tomato Supplement Prevents Prostate Cancer in TRAMP Mice
Authors: Pannellini Tania , Iezzi Manuela , Liberatore Marcella , Sabatini Federica , Iacobelli Stefano , Rossi Cosmo , Alberti Saverio , Di Ilio Carmine , Vitaglione Paola , Fogliano Vincenzo , Piantelli Mauro
Published: April 2023

Supplementary Figure Legends from A Dietary Tomato Supplement Prevents Prostate Cancer in TRAMP Mice
Supplementary Figures 1 - 3 from The Involvement of Endoplasmic Reticulum Stress in the Suppression of Colorectal Tumorigenesis by Tolfenamic Acid
Authors: Zhang Xiaobo , Lee Seong-Ho , Min Kyung-Won , McEntee Michael F. , Jeong Jin Boo , Li Qingwang , Baek Seung Joon
Published: April 2023

PDF file - 135K, Figure S1. TA-induced cyclin D1 down-regulation is independent of proteasomal pathway. Figure S2. ubiquitination is not involved in TA-induced cyclin D1 down-regulation. Figure S3. ER stress mediated cyclin D1 down-regulation by TA.
Supplementary Tables and Figure from DNA Methylation Levels at Chromosome 8q24 in Peripheral Blood Are Associated with 8q24 Cancer Susceptibility Loci
Authors: Barry Kathryn Hughes , Moore Lee E. , Sampson Joshua , Yan Liying , Meyer Ann , Oler Andrew J. , Chung Charles C. , Wang Zhaoming , Yeager Meredith , Amundadottir Laufey , Berndt Sonja I.
Published: April 2023

Supplementary Tables and Figure. Supplementary Table S1. Cancer susceptibility SNPs at chromosome 8q24, sorted by coordinate. Supplementary Table S2. DNA methylation levels and QC results for the 60 CpG sites with a CV less than 25. Supplementary Figure S1. Boxplots displaying percent DNA methylation by genotype for the CpG site - SNP correlations (panels A-J) meeting a False Discovery Rate less than 0.05.
Supplementary Table 1 from A Migration Signature and Plasma Biomarker Panel for Pancreatic Adenocarcinoma
Authors: Balasenthil Seetharaman , Chen Nanyue , Lott Steven T. , Chen Jinyun , Carter Jennifer , Grizzle William E. , Frazier Marsha L. , Sen Subrata , Killary Ann McNeill
Published: April 2023

Supplementary Table 1 from A Migration Signature and Plasma Biomarker Panel for Pancreatic Adenocarcinoma
Supplementary Figure Legends 1-4 from A Migration Signature and Plasma Biomarker Panel for Pancreatic Adenocarcinoma
Authors: Balasenthil Seetharaman , Chen Nanyue , Lott Steven T. , Chen Jinyun , Carter Jennifer , Grizzle William E. , Frazier Marsha L. , Sen Subrata , Killary Ann McNeill
Published: April 2023

Supplementary Figure Legends 1-4 from A Migration Signature and Plasma Biomarker Panel for Pancreatic Adenocarcinoma
Supplementary Figure 2 from A Migration Signature and Plasma Biomarker Panel for Pancreatic Adenocarcinoma
Authors: Balasenthil Seetharaman , Chen Nanyue , Lott Steven T. , Chen Jinyun , Carter Jennifer , Grizzle William E. , Frazier Marsha L. , Sen Subrata , Killary Ann McNeill
Published: April 2023

Supplementary Figure 2 from A Migration Signature and Plasma Biomarker Panel for Pancreatic Adenocarcinoma
Supplemental Figure Legend from Caffeic Acid Directly Targets ERK1/2 to Attenuate Solar UV-Induced Skin Carcinogenesis
Authors: Yang Ge , Fu Yang , Malakhova Margarita , Kurinov Igor , Zhu Feng , Yao Ke , Li Haitao , Chen Hanyong , Li Wei , Lim Do Young , Sheng Yuqiao , Bode Ann M. , Dong Ziming , Dong Zigang
Published: April 2023

Supplemental Figure Legend
Supplemental Figure 1 from Caffeic Acid Directly Targets ERK1/2 to Attenuate Solar UV-Induced Skin Carcinogenesis
Authors: Yang Ge , Fu Yang , Malakhova Margarita , Kurinov Igor , Zhu Feng , Yao Ke , Li Haitao , Chen Hanyong , Li Wei , Lim Do Young , Sheng Yuqiao , Bode Ann M. , Dong Ziming , Dong Zigang
Published: April 2023

Caffeic acid attenuates EGF-induced cell transformation. A, caffeic acid is not toxic to HaCaT cells. Cells were treated with caffeic acid (0-80 µmol/L) or its vehicle, DMSO (as a negative control) in 10% FBS/DMEM for 24 or 48 h. Cell viability was determined by MTS assay and data are represented as means {plus minus} S.D. No significant difference was observed between any groups. B, caffeic acid inhibits EGF-induced neoplastic transformation of HaCaT cells. Data are shown as means {plus minus} S.D from 3 independent experiments and the asterisk indicates a significant (*p < 0.05) decrease in colony formation in cells treated with caffeic acid compared with the DMSO-treated group.
Supplementary Table 4 from MAPRE1 as a Plasma Biomarker for Early-Stage Colorectal Cancer and Adenomas
Authors: Taguchi Ayumu , Rho Jung-hyun , Yan Qingxiang , Zhang Yuzheng , Zhao Yang , Xu Hanwen , Tripathi Satyendra Chandra , Wang Hong , Brenner Dean E. , Kucherlapati Melanie , Kucherlapati Raju , Boutin Adam T. , Wang Y. Alan , DePinho Ronald A. , Feng Ziding , Lampe Paul D. , Hanash Samir M.
Published: April 2023

Normalized spectra counts of AK1, CLIC1, and SOD1 in eight CRC cell lines
Supplementary Table 3 from MAPRE1 as a Plasma Biomarker for Early-Stage Colorectal Cancer and Adenomas
Authors: Taguchi Ayumu , Rho Jung-hyun , Yan Qingxiang , Zhang Yuzheng , Zhao Yang , Xu Hanwen , Tripathi Satyendra Chandra , Wang Hong , Brenner Dean E. , Kucherlapati Melanie , Kucherlapati Raju , Boutin Adam T. , Wang Y. Alan , DePinho Ronald A. , Feng Ziding , Lampe Paul D. , Hanash Samir M.
Published: April 2023

Normalized intensity of high density antibody array and CEA levels in the University of Michigan sample set
Supplementary Methods from MAPRE1 as a Plasma Biomarker for Early-Stage Colorectal Cancer and Adenomas
Authors: Taguchi Ayumu , Rho Jung-hyun , Yan Qingxiang , Zhang Yuzheng , Zhao Yang , Xu Hanwen , Tripathi Satyendra Chandra , Wang Hong , Brenner Dean E. , Kucherlapati Melanie , Kucherlapati Raju , Boutin Adam T. , Wang Y. Alan , DePinho Ronald A. , Feng Ziding , Lampe Paul D. , Hanash Samir M.
Published: April 2023

Supplementary Methods
Supplementary Table S1 from Carcinogen-Induced Skin Tumor Development Requires Leukocytic Expression of the Transcription Factor Runx3
Authors: Bauer Omri , Hantisteanu Shay , Lotem Joseph , Groner Yoram
Published: April 2023

RT2 Profiler PCR array-analyzed cytokines and chemokins. 96-well RT-qPCR assay comparatively measures the expression of 84 cytokine/chemokine genes that are key immune system response regulators. Supplementary Figure S2. Comparative assessment of leukocyte repertoire in chronically-inflamed skin. Supplementary Figure S3. DETCs are prevalent in DCRunx3-/- mouse epidermis.
Supplementary Figure 3 from Uterine Serous Carcinoma: Increased Familial Risk for Lynch-Associated Malignancies
Authors: Dewdney Summer B. , Kizer Nora T. , Andaya Abegail A. , Babb Sheri A. , Luo Jingqin , Mutch David G. , Schmidt Amy P. , Brinton Louise A. , Broaddus Russell R. , Ramirez Nilsa C. , Huettner Phyllis C. , McMeekin Donald Scott , Darcy Kathleen , Ali Shamshad , Judson Patricia L. , Mannel Robert S. , Lele Shashikant B. , O'Malley David M. , Goodfellow Paul J.
Published: April 2023

PDF file - 181K
Supplementary Figure 1 from Uterine Serous Carcinoma: Increased Familial Risk for Lynch-Associated Malignancies
Authors: Dewdney Summer B. , Kizer Nora T. , Andaya Abegail A. , Babb Sheri A. , Luo Jingqin , Mutch David G. , Schmidt Amy P. , Brinton Louise A. , Broaddus Russell R. , Ramirez Nilsa C. , Huettner Phyllis C. , McMeekin Donald Scott , Darcy Kathleen , Ali Shamshad , Judson Patricia L. , Mannel Robert S. , Lele Shashikant B. , O'Malley David M. , Goodfellow Paul J.
Published: April 2023

PDF file - 180K
Supplementary figure S3 from Epigenetic DNA Methylation of Antioxidative Stress Regulator NRF2 in Human Prostate Cancer
Authors: Khor Tin Oo , Fuentes Francisco , Shu Limin , Paredes-Gonzalez Ximena , Yang Anne Yuqing , Liu Yue , Smiraglia Dominic J. , Yegnasubramanian Srinivasan , Nelson William G. , Kong Ah-Ng Tony
Published: April 2023

Supplementary figure S3. Normalized expression of NRF2 in human prostate tissues is decreased in advanced tumor stages. Gene expression profiling data sets were retrieved from Wallace et al. (42), Liu et al. (43), and Lapointe et al. (44) data set and grouped by cancer and normal type (www.oncomine.org).