bluuebunny/crossref_metadata_2025 huggingface dataset:
Supplementary Figure 3 from Chk2 Phosphorylation of Survivin-ΔEx3 Contributes to a DNA Damage–Sensing Checkpoint in Cancer
Authors: Lopergolo Alessia , Tavecchio Michele , Lisanti Sofia , Ghosh Jagadish C. , Dohi Takehiko , Faversani Alice , Vaira Valentina , Bosari Silvano , Tanigawa Nobuhiko , Delia Domenico , Kossenkov Andrew V. , Showe Louise C. , Altieri Dario C.
Published: April 2023

PDF file - 21K, Pull down experiments. Recombinant GST, GST-survivin (SVV) or GST-survivin-DeltaEx3 was incubated with LN229 total cell extracts (TCE) and bound proteins were analyzed with an antibody to Chk2 (A) or Hsp60 (B) by Western blotting. Recombinant proteins used for the pull down experiments were stained with Coomassie blue (bottom panels).
Supplementary Methods, Tables 1-4, Figures 1-7 from Small RNA Sequencing and Functional Characterization Reveals MicroRNA-143 Tumor Suppressor Activity in Liposarcoma
Authors: Ugras Stacy , Brill Elliott , Jacobsen Anders , Hafner Markus , Socci Nicholas D. , DeCarolis Penelope L. , Khanin Raya , O'Connor Rachael , Mihailovic Aleksandra , Taylor Barry S. , Sheridan Robert , Gimble Jeffrey M. , Viale Agnes , Crago Aimee , Antonescu Cristina R. , Sander Chris , Tuschl Thomas , Singer Samuel
Published: April 2023

Supplementary Methods, Tables 1-4, Figures 1-7 from Small RNA Sequencing and Functional Characterization Reveals MicroRNA-143 Tumor Suppressor Activity in Liposarcoma
Supplementary Figure Legends from COX-2 Blockade Suppresses Gliomagenesis by Inhibiting Myeloid-Derived Suppressor Cells
Authors: Fujita Mitsugu , Kohanbash Gary , Fellows-Mayle Wendy , Hamilton Ronald L. , Komohara Yoshihiro , Decker Stacy A. , Ohlfest John R. , Okada Hideho
Published: April 2023

Supplementary Figure Legends from COX-2 Blockade Suppresses Gliomagenesis by Inhibiting Myeloid-Derived Suppressor Cells
Supplementary Figure Legends 1-4 from Select Heterozygous Keap1 Mutations Have a Dominant-Negative Effect on Wild-Type Keap1 In Vivo
Authors: Suzuki Takafumi , Maher Jonathan , Yamamoto Masayuki
Published: April 2023

Supplementary Figure Legends 1-4 from Select Heterozygous Keap1 Mutations Have a Dominant-Negative Effect on Wild-Type Keap1 In Vivo
Supplementary Figure 3 from Select Heterozygous Keap1 Mutations Have a Dominant-Negative Effect on Wild-Type Keap1 In Vivo
Authors: Suzuki Takafumi , Maher Jonathan , Yamamoto Masayuki
Published: April 2023

Supplementary Figure 3 from Select Heterozygous Keap1 Mutations Have a Dominant-Negative Effect on Wild-Type Keap1 In Vivo
Supplementary Figure 4 from IKKβ and NF-κB Transcription Govern Lymphoma Cell Survival through AKT-Induced Plasma Membrane Trafficking of GLUT1
Authors: Sommermann Thomas G. , O'Neill Kathleen , Plas David R. , Cahir-McFarland Ellen
Published: April 2023

PDF file - 314K
Supplementary Video 8 from Breast Cancer Subtype-Specific Interactions with the Microenvironment Dictate Mechanisms of Invasion
Authors: Dang Tuyen T. , Prechtl Amanda M. , Pearson Gray W.
Published: April 2023

MOV file - Live-imaging of a small MCFDCIS-H2B:mCherry spheroid co-cultured with mammary fibroblasts.
Supplementary Video 4 from Breast Cancer Subtype-Specific Interactions with the Microenvironment Dictate Mechanisms of Invasion
Authors: Dang Tuyen T. , Prechtl Amanda M. , Pearson Gray W.
Published: April 2023

MOV file - 1.1MB, Live-imaging of a MCFDCIS-H2B:mCherry spheroid co-cultured with mammary fibroblasts.
Supplementary Video 23 from Breast Cancer Subtype-Specific Interactions with the Microenvironment Dictate Mechanisms of Invasion
Authors: Dang Tuyen T. , Prechtl Amanda M. , Pearson Gray W.
Published: April 2023

MOV file - 225K, mCherryCAAX images from live-imaging of a MCFDCIS-mCherryCAAX spheroid and FITC-Collagen I.
Supplementary Video 15 from Breast Cancer Subtype-Specific Interactions with the Microenvironment Dictate Mechanisms of Invasion
Authors: Dang Tuyen T. , Prechtl Amanda M. , Pearson Gray W.
Published: April 2023

MOV file - 314K, Live-imaging of a HCC1806-H2B:GFP spheroid.
Supplementary Methods from Breast Cancer Subtype-Specific Interactions with the Microenvironment Dictate Mechanisms of Invasion
Authors: Dang Tuyen T. , Prechtl Amanda M. , Pearson Gray W.
Published: April 2023

PDF file - 67K
Supplementary Video 2 from Novel Cryo-Imaging of the Glioma Tumor Microenvironment Reveals Migration and Dispersal Pathways in Vivid Three-Dimensional Detail
Authors: Burden-Gulley Susan M. , Qutaish Mohammed Q. , Sullivant Kristin E. , Lu Hong , Wang Jing , Craig Sonya E.L. , Basilion James P. , Wilson David L. , Brady-Kalnay Susann M.
Published: April 2023

Quicktime File - 6.76MB
Supplementary Figure 2 from Breast Cancer Subtype-Specific Interactions with the Microenvironment Dictate Mechanisms of Invasion
Authors: Dang Tuyen T. , Prechtl Amanda M. , Pearson Gray W.
Published: April 2023

PDF file - 5MB, Cancer cells in the spheroids follow the path of the initial invading cells.
Supplementary Methods and Materials from Replication and Functional Genomic Analyses of the Breast Cancer Susceptibility Locus at 6q25.1 Generalize Its Importance in Women of Chinese, Japanese, and European Ancestry
Authors: Cai Qiuyin , Wen Wanqing , Qu Shimian , Li Guoliang , Egan Kathleen M. , Chen Kexin , Deming Sandra L. , Shen Hongbing , Shen Chen-Yang , Gammon Marilie D. , Blot William J. , Matsuo Keitaro , Haiman Christopher A. , Khoo Ui Soon , Iwasaki Motoki , Santella Regina M. , Zhang Lina , Fair Alecia Malin , Hu Zhibin , Wu Pei-Ei , Signorello Lisa B. , Titus-Ernstoff Linda , Tajima Kazuo , Henderson Brian E. , Chan Kelvin Y.K. , Kasuga Yoshio , Newcomb Polly A. , Zheng Hong , Cui Yong , Wang Furu , Shieh Ya-Lan , Iwata Hiroji , Le Marchand Loic , Chan Sum Yin , Shrubsole Martha J. , Trentham-Dietz Amy , Tsugane Shoichiro , Garcia-Closas Montserrat , Long Jirong , Li Chun , Shi Jiajun , Huang Bo , Xiang Yong-Bing , Gao Yu-Tang , Lu Wei , Shu Xiao-Ou , Zheng Wei
Published: April 2023

Supplementary Methods and Materials from Replication and Functional Genomic Analyses of the Breast Cancer Susceptibility Locus at 6q25.1 Generalize Its Importance in Women of Chinese, Japanese, and European Ancestry
Supplementary Table 2 from Human Papillomavirus E7 Enhances Hypoxia-Inducible Factor 1–Mediated Transcription by Inhibiting Binding of Histone Deacetylases
Authors: Bodily Jason M. , Mehta Kavi P.M. , Laimins Laimonis A.
Published: April 2023

Supplementary Table 2 from Human Papillomavirus E7 Enhances Hypoxia-Inducible Factor 1–Mediated Transcription by Inhibiting Binding of Histone Deacetylases
Supplementary Video 8 from Analysis of Mitosis and Antimitotic Drug Responses in Tumors by In Vivo Microscopy and Single-Cell Pharmacodynamics
Authors: Orth James D. , Kohler Rainer H. , Foijer Floris , Sorger Peter K. , Weissleder Ralph , Mitchison Timothy J.
Published: April 2023

Supplementary Video 8 from Analysis of Mitosis and Antimitotic Drug Responses in Tumors by In Vivo Microscopy and Single-Cell Pharmacodynamics
Supplementary Video 4 from Analysis of Mitosis and Antimitotic Drug Responses in Tumors by In Vivo Microscopy and Single-Cell Pharmacodynamics
Authors: Orth James D. , Kohler Rainer H. , Foijer Floris , Sorger Peter K. , Weissleder Ralph , Mitchison Timothy J.
Published: April 2023

Supplementary Video 4 from Analysis of Mitosis and Antimitotic Drug Responses in Tumors by In Vivo Microscopy and Single-Cell Pharmacodynamics
Supplementary Figure 4 from LOXL2-Mediated Matrix Remodeling in Metastasis and Mammary Gland Involution
Authors: Barker Holly E. , Chang Joan , Cox Thomas R. , Lang Georgina , Bird Demelza , Nicolau Monica , Evans Holly R. , Gartland Alison , Erler Janine T.
Published: April 2023

Supplementary Figure 4 from LOXL2-Mediated Matrix Remodeling in Metastasis and Mammary Gland Involution
Supplementary Figure 2 from LOXL2-Mediated Matrix Remodeling in Metastasis and Mammary Gland Involution
Authors: Barker Holly E. , Chang Joan , Cox Thomas R. , Lang Georgina , Bird Demelza , Nicolau Monica , Evans Holly R. , Gartland Alison , Erler Janine T.
Published: April 2023

Supplementary Figure 2 from LOXL2-Mediated Matrix Remodeling in Metastasis and Mammary Gland Involution
Supplementary Methods from Analysis of Mitosis and Antimitotic Drug Responses in Tumors by In Vivo Microscopy and Single-Cell Pharmacodynamics
Authors: Orth James D. , Kohler Rainer H. , Foijer Floris , Sorger Peter K. , Weissleder Ralph , Mitchison Timothy J.
Published: April 2023

Supplementary Methods from Analysis of Mitosis and Antimitotic Drug Responses in Tumors by In Vivo Microscopy and Single-Cell Pharmacodynamics
Supplementary Table 1 from The White Adipose Tissue Used in Lipotransfer Procedures Is a Rich Reservoir of CD34+ Progenitors Able to Promote Cancer Progression
Authors: Martin-Padura Ines , Gregato Giuliana , Marighetti Paola , Mancuso Patrizia , Calleri Angelica , Corsini Chiara , Pruneri Giancarlo , Manzotti Michela , Lohsiriwat Visnu , Rietjens Mario , Petit Jean-Yves , Bertolini Francesco
Published: April 2023

PDF file - 82K
Supplementary Figure 4 from LPA Receptor Heterodimerizes with CD97 to Amplify LPA-Initiated RHO-Dependent Signaling and Invasion in Prostate Cancer Cells
Authors: Ward Yvona , Lake Ross , Yin Juan Juan , Heger Christopher D. , Raffeld Mark , Goldsmith Paul K. , Merino Maria , Kelly Kathleen
Published: April 2023

PDF file - 5.9MB
Supplementary Figure 2 from LPA Receptor Heterodimerizes with CD97 to Amplify LPA-Initiated RHO-Dependent Signaling and Invasion in Prostate Cancer Cells
Authors: Ward Yvona , Lake Ross , Yin Juan Juan , Heger Christopher D. , Raffeld Mark , Goldsmith Paul K. , Merino Maria , Kelly Kathleen
Published: April 2023

PDF file - 308K
Supplementary Figure 6 from KRas Induces a Src/PEAK1/ErbB2 Kinase Amplification Loop That Drives Metastatic Growth and Therapy Resistance in Pancreatic Cancer
Authors: Kelber Jonathan A. , Reno Theresa , Kaushal Sharmeela , Metildi Cristina , Wright Tracy , Stoletov Konstantin , Weems Jessica M. , Park Frederick D. , Mose Evangeline , Wang Yingchun , Hoffman Robert M. , Lowy Andrew M. , Bouvet Michael , Klemke Richard L.
Published: April 2023

PDF file - 97K
Supplementary Figure 2 from KRas Induces a Src/PEAK1/ErbB2 Kinase Amplification Loop That Drives Metastatic Growth and Therapy Resistance in Pancreatic Cancer
Authors: Kelber Jonathan A. , Reno Theresa , Kaushal Sharmeela , Metildi Cristina , Wright Tracy , Stoletov Konstantin , Weems Jessica M. , Park Frederick D. , Mose Evangeline , Wang Yingchun , Hoffman Robert M. , Lowy Andrew M. , Bouvet Michael , Klemke Richard L.
Published: April 2023

Supplementary Figure 2 from KRas Induces a Src/PEAK1/ErbB2 Kinase Amplification Loop That Drives Metastatic Growth and Therapy Resistance in Pancreatic Cancer
Supplementary Figure 1 from HER3 Is Required for HER2-Induced Preneoplastic Changes to the Breast Epithelium and Tumor Formation
Authors: Vaught David B. , Stanford Jamie C. , Young Christian , Hicks Donna J. , Wheeler Frank , Rinehart Cammie , Sánchez Violeta , Koland John , Muller William J. , Arteaga Carlos L. , Cook Rebecca S.
Published: April 2023

PDF file - 4MB, Loss of ErbB3 impairs hyperplasia of MMTV-Neu mammary glands.
Supplementary Figure 9 from A Kinome-Wide Screen Identifies the Insulin/IGF-I Receptor Pathway as a Mechanism of Escape from Hormone Dependence in Breast Cancer
Authors: Fox Emily M. , Miller Todd W. , Balko Justin M. , Kuba Maria G. , Sánchez Violeta , Smith R. Adam , Liu Shuying , González-Angulo Ana María , Mills Gordon B. , Ye Fei , Shyr Yu , Manning H. Charles , Buck Elizabeth , Arteaga Carlos L.
Published: April 2023

PDF file - 266K
Supplementary Figure 6 from Stromal Estrogen Receptor-α Promotes Tumor Growth by Normalizing an Increased Angiogenesis
Authors: Péqueux Christel , Raymond-Letron Isabelle , Blacher Silvia , Boudou Frédéric , Adlanmerini Marine , Fouque Marie-José , Rochaix Philippe , Noël Agnès , Foidart Jean-Michel , Krust Andrée , Chambon Pierre , Brouchet Laurent , Arnal Jean-François , Lenfant Françoise
Published: April 2023

PDF file - 204K, B16K1 Tumor necrosis in C57BL/6 mice
Supplementary Figure 10 from A Kinome-Wide Screen Identifies the Insulin/IGF-I Receptor Pathway as a Mechanism of Escape from Hormone Dependence in Breast Cancer
Authors: Fox Emily M. , Miller Todd W. , Balko Justin M. , Kuba Maria G. , Sánchez Violeta , Smith R. Adam , Liu Shuying , González-Angulo Ana María , Mills Gordon B. , Ye Fei , Shyr Yu , Manning H. Charles , Buck Elizabeth , Arteaga Carlos L.
Published: April 2023

PDF file - 4.2MB
Supplementary Figure 2 from Stromal Estrogen Receptor-α Promotes Tumor Growth by Normalizing an Increased Angiogenesis
Authors: Péqueux Christel , Raymond-Letron Isabelle , Blacher Silvia , Boudou Frédéric , Adlanmerini Marine , Fouque Marie-José , Rochaix Philippe , Noël Agnès , Foidart Jean-Michel , Krust Andrée , Chambon Pierre , Brouchet Laurent , Arnal Jean-François , Lenfant Françoise
Published: April 2023

PDF file - 364K, B16K1, LL2 and 4T1 characterization
Supplementary Figure 7 from Spatial Regulation of RhoA Activity during Pancreatic Cancer Cell Invasion Driven by Mutant p53
Authors: Timpson Paul , McGhee Ewan J. , Morton Jennifer P. , von Kriegsheim Alex , Schwarz Juliane P. , Karim Saadia A. , Doyle Brendan , Quinn Jean A. , Carragher Neil O. , Edward Mike , Olson Michael F. , Frame Margaret C. , Brunton Valerie G. , Sansom Owen J. , Anderson Kurt I.
Published: April 2023

Supplementary Figure 7 from Spatial Regulation of RhoA Activity during Pancreatic Cancer Cell Invasion Driven by Mutant p53
Supplementary Figure Legends 1-6 from Interaction between MYC and MCL1 in the Genesis and Outcome of Non–Small-Cell Lung Cancer
Authors: Allen Thaddeus D. , Zhu Chang Qi , Jones Kirk D. , Yanagawa Naoki , Tsao Ming-Sound , Bishop J. Michael
Published: April 2023

Supplementary Figure Legends 1-6 from Interaction between MYC and MCL1 in the Genesis and Outcome of Non–Small-Cell Lung Cancer
Supplementary Figures 1-5, Tables 1-5 from Clinical Impact of Different Classes of Infiltrating T Cytotoxic and Helper Cells (Th1, Th2, Treg, Th17) in Patients with Colorectal Cancer
Authors: Tosolini Marie , Kirilovsky Amos , Mlecnik Bernhard , Fredriksen Tessa , Mauger Stéphanie , Bindea Gabriela , Berger Anne , Bruneval Patrick , Fridman Wolf-Herman , Pagès Franck , Galon Jérôme
Published: April 2023

Supplementary Figures 1-5, Tables 1-5 from Clinical Impact of Different Classes of Infiltrating T Cytotoxic and Helper Cells (Th1, Th2, Treg, Th17) in Patients with Colorectal Cancer
Supplementary Figure Legends 1-7 from STAT3 Is Necessary for Proliferation and Survival in Colon Cancer–Initiating Cells
Authors: Lin Li , Liu Aiguo , Peng Zhengang , Lin Huey-Jen , Li Pui-Kai , Li Chenglong , Lin Jiayuh
Published: April 2023

PDF file - 84K
Supplementary Figure 4 from STAT3 Is Necessary for Proliferation and Survival in Colon Cancer–Initiating Cells
Authors: Lin Li , Liu Aiguo , Peng Zhengang , Lin Huey-Jen , Li Pui-Kai , Li Chenglong , Lin Jiayuh
Published: April 2023

PDF file - 4.1MB
Supplementary Table 12 from Definition of the Landscape of Promoter DNA Hypomethylation in Liver Cancer
Authors: Stefanska Barbara , Huang Jian , Bhattacharyya Bishnu , Suderman Matthew , Hallett Michael , Han Ze-Guang , Szyf Moshe
Published: April 2023

Excel file - 286K, List of genes in the heatmap in Fig. 3A.
Supplementary Figure 7 from Definition of the Landscape of Promoter DNA Hypomethylation in Liver Cancer
Authors: Stefanska Barbara , Huang Jian , Bhattacharyya Bishnu , Suderman Matthew , Hallett Michael , Han Ze-Guang , Szyf Moshe
Published: April 2023

PDF file - 609K, (A,B) Expression of genes that are affected by MBD2 depletion in addition to those shown in Fig. 5 in: (A) HepG2 and SkHep1 cancer cells and NorHep cells; (B) HepG2 and SkHep1 cells after MBD2 knockdown. All results represent mean � S.D. of two or three independent experiments; ***P < 0.001, **P <0.01, *P <0.05.
Supplementary Figure 5 from Definition of the Landscape of Promoter DNA Hypomethylation in Liver Cancer
Authors: Stefanska Barbara , Huang Jian , Bhattacharyya Bishnu , Suderman Matthew , Hallett Michael , Han Ze-Guang , Szyf Moshe
Published: April 2023

PDF file - 923K, Expression and DNA methylation characteristics in normal liver cells of genes that become hypomethylated in HCC. The distribution of promoter methylation levels (A) and gene expression (B) in normal liver tissue for genes that are hypomethylated and induced, hypomethylated but not induced, induced but not hypomethylated in HCC in comparison with the distribution of the state of methylation and expression in the entire population of genes in normal liver. * The lists of genes hypomethylated and induced in liver cancer that are highly methylated (categories 6, 7, 8) and lowly expressed (categories 1, 2) in normal liver.
Supplementary Figure 2 from Definition of the Landscape of Promoter DNA Hypomethylation in Liver Cancer
Authors: Stefanska Barbara , Huang Jian , Bhattacharyya Bishnu , Suderman Matthew , Hallett Michael , Han Ze-Guang , Szyf Moshe
Published: April 2023

PDF file - 427K, Percentage of cytosines at CpG sites in promoter regions of AKR1B10, CENPH, MMP2, MMP9, MMP12, NUPR1, PAGE4, PLAU, and S100A5 in cancer and matched adjacent normal tissues from HCC patients as determined by pyrosequencing using SNP assay. Non-bisulfite converted DNA was a template in this experiment. The results indicate that deletions and/or mutations cannot be responsible for promoter hypomethylation of these genes observed in the patients as shown in Figure 5 and Supplementary Fig. S1.
Supplementary Table 1 from Cyclophosphamide Synergizes with Type I Interferons through Systemic Dendritic Cell Reactivation and Induction of Immunogenic Tumor Apoptosis
Authors: Schiavoni Giovanna , Sistigu Antonella , Valentini Mara , Mattei Fabrizio , Sestili Paola , Spadaro Francesca , Sanchez Massimo , Lorenzi Silvia , D'Urso Maria Teresa , Belardelli Filippo , Gabriele Lucia , Proietti Enrico , Bracci Laura
Published: April 2023

Supplementary Table 1 from Cyclophosphamide Synergizes with Type I Interferons through Systemic Dendritic Cell Reactivation and Induction of Immunogenic Tumor Apoptosis
Supplementary Figures 1-6 from GLIPR1 Suppresses Prostate Cancer Development through Targeted Oncoprotein Destruction
Authors: Li Likun , Ren Chengzhen , Yang Guang , Fattah Elmoataz Abdel , Goltsov Alexei A. , Kim Soo Mi , Lee Ju-Seog , Park Sanghee , Demayo Francesco J. , Ittmann Michael M. , Troncoso Patricia , Thompson Timothy C.
Published: April 2023

PDF file - 875K
Supplementary Movie from A Simple Approach to Cancer Therapy Afforded by Multivalent Pseudopeptides That Target Cell-Surface Nucleoproteins
Authors: Destouches Damien , Page Nicolas , Hamma-Kourbali Yamina , Machi Valérie , Chaloin Olivier , Frechault Sophie , Birmpas Charalampos , Katsoris Panagiotis , Beyrath Julien , Albanese Patricia , Maurer Marie , Carpentier Gilles , Strub Jean-Marc , Van Dorsselaer Alain , Muller Sylviane , Bagnard Dominique , Briand Jean Paul , Courty José
Published: April 2023

Supplementary Movie from A Simple Approach to Cancer Therapy Afforded by Multivalent Pseudopeptides That Target Cell-Surface Nucleoproteins
Supplementary Table 1 from Cyclin D1 Inhibits Mitochondrial Activity in B Cells
Authors: Tchakarska Guergana , Roussel Mikel , Troussard Xavier , Sola Brigitte
Published: April 2023

Supplementary Table 1 from Cyclin D1 Inhibits Mitochondrial Activity in B Cells
Supplementary Figure 1 from Cyclin D1 Inhibits Mitochondrial Activity in B Cells
Authors: Tchakarska Guergana , Roussel Mikel , Troussard Xavier , Sola Brigitte
Published: April 2023

Supplementary Figure 1 from Cyclin D1 Inhibits Mitochondrial Activity in B Cells
Supplementary Figure 6 from Hypoxia Induces Escape from Innate Immunity in Cancer Cells via Increased Expression of ADAM10: Role of Nitric Oxide
Authors: Barsoum Ivraym B. , Hamilton Thomas K. , Li Xin , Cotechini Tiziana , Miles Ellen A. , Siemens D. Robert , Graham Charles H.
Published: April 2023

PDF file - 62K
Supplementary Figures 1-3 from Global Characterization of the SRC-1 Transcriptome Identifies ADAM22 as an ER-Independent Mediator of Endocrine-Resistant Breast Cancer
Authors: McCartan Damian , Bolger Jarlath C. , Fagan Aílis , Byrne Christopher , Hao Yuan , Qin Li , McIlroy Marie , Xu Jianming , Hill Arnold D. , Gaora Peadar Ó , Young Leonie S.
Published: April 2023

PDF file - 245K
Supplementary Tables 1-4 from EMT and Stem Cell–Like Properties Associated with miR-205 and miR-200 Epigenetic Silencing Are Early Manifestations during Carcinogen-Induced Transformation of Human Lung Epithelial Cells
Authors: Tellez Carmen S. , Juri Daniel E. , Do Kieu , Bernauer Amanda M. , Thomas Cindy L. , Damiani Leah A. , Tessema Mathewos , Leng Shuguang , Belinsky Steven A.
Published: April 2023

Supplementary Tables 1-4 from EMT and Stem Cell–Like Properties Associated with miR-205 and miR-200 Epigenetic Silencing Are Early Manifestations during Carcinogen-Induced Transformation of Human Lung Epithelial Cells
Supplementary Figure 3 from Hypoxia Induces Escape from Innate Immunity in Cancer Cells via Increased Expression of ADAM10: Role of Nitric Oxide
Authors: Barsoum Ivraym B. , Hamilton Thomas K. , Li Xin , Cotechini Tiziana , Miles Ellen A. , Siemens D. Robert , Graham Charles H.
Published: April 2023

PDF file - 82K
Supplementary Figure Legends 1-2 from EMT and Stem Cell–Like Properties Associated with miR-205 and miR-200 Epigenetic Silencing Are Early Manifestations during Carcinogen-Induced Transformation of Human Lung Epithelial Cells
Authors: Tellez Carmen S. , Juri Daniel E. , Do Kieu , Bernauer Amanda M. , Thomas Cindy L. , Damiani Leah A. , Tessema Mathewos , Leng Shuguang , Belinsky Steven A.
Published: April 2023

Supplementary Figure Legends 1-2 from EMT and Stem Cell–Like Properties Associated with miR-205 and miR-200 Epigenetic Silencing Are Early Manifestations during Carcinogen-Induced Transformation of Human Lung Epithelial Cells
Supplementary Table 2 from MicroRNA-616 Induces Androgen-Independent Growth of Prostate Cancer Cells by Suppressing Expression of Tissue Factor Pathway Inhibitor TFPI-2
Authors: Ma Stephanie , Chan Yuen Piu , Kwan Pak Shing , Lee Terence K. , Yan Mingxia , Tang Kwan Ho , Ling Ming Tat , Vielkind Juergen R. , Guan Xin-Yuan , Chan Kwok Wah
Published: April 2023

Supplementary Table 2 from MicroRNA-616 Induces Androgen-Independent Growth of Prostate Cancer Cells by Suppressing Expression of Tissue Factor Pathway Inhibitor TFPI-2
Supplementary Figure 3 from Combination Therapy with HSP90 Inhibitor 17-DMAG Reconditions the Tumor Microenvironment to Improve Recruitment of Therapeutic T cells
Authors: Rao Aparna , Taylor Jennifer L. , Chi-Sabins Nina , Kawabe Mayumi , Gooding William E. , Storkus Walter J.
Published: April 2023

PDF file - 254K, 17-DMAG improves the anti-tumor efficacy of adoptively-transferred anti-EphA2 CDS� T cells with optimal anti-tumor benefit if T cell transfer occurs 4 days after initiating 17-DMAG administration
Supplementary Figure 1 from Combination Therapy with HSP90 Inhibitor 17-DMAG Reconditions the Tumor Microenvironment to Improve Recruitment of Therapeutic T cells
Authors: Rao Aparna , Taylor Jennifer L. , Chi-Sabins Nina , Kawabe Mayumi , Gooding William E. , Storkus Walter J.
Published: April 2023

PDF file - 242K, EphA2-specific COB' T cells preferentially recognize DMAG-treated EphA2' syngenic tumor target cells in vitro
Supplementary Methods, Table 1 from Functional EGFR Germline Polymorphisms May Confer Risk for EGFR Somatic Mutations in Non–Small Cell Lung Cancer, with a Predominant Effect on Exon 19 Microdeletions
Authors: Liu Wanqing , He Lijun , Ramírez Jacqueline , Krishnaswamy Soundararajan , Kanteti Rajani , Wang Yi-Ching , Salgia Ravi , Ratain Mark J.
Published: April 2023

Supplementary Methods, Table 1 from Functional EGFR Germline Polymorphisms May Confer Risk for EGFR Somatic Mutations in Non–Small Cell Lung Cancer, with a Predominant Effect on Exon 19 Microdeletions
Supplementary Table 3 from Targets of the Tumor Suppressor miR-200 in Regulation of the Epithelial–Mesenchymal Transition in Cancer
Authors: Schliekelman Mark J. , Gibbons Don L. , Faca Vitor M. , Creighton Chad J. , Rizvi Zain H. , Zhang Qing , Wong Chee-Hong , Wang Hong , Ungewiss Christin , Ahn Young-Ho , Shin Dong-Hoon , Kurie Jonathan M. , Hanash Samir M.
Published: April 2023

XLS file - 59K, Gene Ontology tables for differentially regulated proteins from comparing 344SQ/393P data sets.
Supplementary Table 6 from SMAC Mimetic (JP1201) Sensitizes Non–Small Cell Lung Cancers to Multiple Chemotherapy Agents in an IAP-Dependent but TNF-α–Independent Manner
Authors: Greer Rachel M. , Peyton Michael , Larsen Jill E. , Girard Luc , Xie Yang , Gazdar Adi F. , Harran Patrick , Wang Lai , Brekken Rolf A. , Wang Xiaodong , Minna John D.
Published: April 2023

PDF file - 58K, Cell growth assays were performed in 96 well format for 5 days. Cells were plated on day zero and exposed to drug for four days before cell survival was determined using MTS (Promega; final concentration, 333 mg/mL) read at 490 nm 1‐3 hours after addition. Drug sensitivity curves and IC50 were determined using in house software. - indicates where no drug sensitivity data has been determined.
Supplementary Table 3 from SMAC Mimetic (JP1201) Sensitizes Non–Small Cell Lung Cancers to Multiple Chemotherapy Agents in an IAP-Dependent but TNF-α–Independent Manner
Authors: Greer Rachel M. , Peyton Michael , Larsen Jill E. , Girard Luc , Xie Yang , Gazdar Adi F. , Harran Patrick , Wang Lai , Brekken Rolf A. , Wang Xiaodong , Minna John D.
Published: April 2023

PDF file - 57K, Combination indices (CI) were calculated using the Chou‐Talay method (Chou and Rideout, 1991). CI values that are less than 1 � 0.2 indicate synergy, values that are equal to 1 � 0.2 indicate additivity, and values that are greater than 1 � 0.2 indicate antagonism. Error was calculated by propagating the error from the drug sensitivity phenotypes from MTS data. Data represents average of �3 determinants.
Supplementary Figure 1 from RNA Helicase DDX5 Is a p53-Independent Target of ARF That Participates in Ribosome Biogenesis
Authors: Saporita Anthony J. , Chang Hsiang-Chun , Winkeler Crystal L. , Apicelli Anthony J. , Kladney Raleigh D. , Wang Jianbo , Townsend R. Reid , Michel Loren S. , Weber Jason D.
Published: April 2023

PDF file - 1.3MB
Supplementary Methods from Cell-Cycle Regulator Cks1 Promotes Hepatocellular Carcinoma by Supporting NF-κB–Dependent Expression of Interleukin-8
Authors: Lee Eun-Kyoung , Kim Dae-Ghon , Kim Jang-Seong , Yoon Yeup
Published: April 2023

PDF file - 93K, Reagents and antibodies, construction of Cks1- and p27-overexpressing HCC cells, and construction of Cks1-, Skp2-, and IL8-knockdown HCC cells.
Supplementary Figure 7 from Cell-Cycle Regulator Cks1 Promotes Hepatocellular Carcinoma by Supporting NF-κB–Dependent Expression of Interleukin-8
Authors: Lee Eun-Kyoung , Kim Dae-Ghon , Kim Jang-Seong , Yoon Yeup
Published: April 2023

PDF file - 47K
Supplementary Figure 7 from The RASSF3 Candidate Tumor Suppressor Induces Apoptosis and G1–S Cell-Cycle Arrest via p53
Authors: Kudo Takumi , Ikeda Mitsunobu , Nishikawa Misa , Yang Zeyu , Ohno Kikuo , Nakagawa Kentaro , Hata Yutaka
Published: April 2023

PDF file - 163K, This figure demonstrates that RASSF3 suppresses p53 degradation in HeLa cells and that RASSF3 depletion causes polyploidy in HeLa cells
Supplementary Figure 3 from Cell-Cycle Regulator Cks1 Promotes Hepatocellular Carcinoma by Supporting NF-κB–Dependent Expression of Interleukin-8
Authors: Lee Eun-Kyoung , Kim Dae-Ghon , Kim Jang-Seong , Yoon Yeup
Published: April 2023

PDF file - 54K
Supplementary Methods from Antiangiogenic Agent Sunitinib Transiently Increases Tumor Oxygenation and Suppresses Cycling Hypoxia
Authors: Matsumoto Shingo , Batra Sonny , Saito Keita , Yasui Hironobu , Choudhuri Rajani , Gadisetti Chandramouli , Subramanian Sankaran , Devasahayam Nallathamby , Munasinghe Jeeva P. , Mitchell James B. , Krishna Murali C.
Published: April 2023

PDF file - 134KB
Supplementary Data from Antiangiogenic Agent Sunitinib Transiently Increases Tumor Oxygenation and Suppresses Cycling Hypoxia
Authors: Matsumoto Shingo , Batra Sonny , Saito Keita , Yasui Hironobu , Choudhuri Rajani , Gadisetti Chandramouli , Subramanian Sankaran , Devasahayam Nallathamby , Munasinghe Jeeva P. , Mitchell James B. , Krishna Murali C.
Published: April 2023

PDF file - 105KB, Average pO2 values of the four groups of tumor regions (Fig. 3c) from imaging experiments in mouse 1 and 2 (Fig. 2a and Fig. 3a). Data are expressed as average � SD (mmHg).
Supplementary Tables 1-4 from A Zebrafish Model to Study and Therapeutically Manipulate Hypoxia Signaling in Tumorigenesis
Authors: Santhakumar Kirankumar , Judson Emma C. , Elks Philip M. , McKee Sarah , Elworthy Stone , van Rooijen Ellen , Walmsley Sarah S. , Renshaw Stephen A. , Cross Simon S. , van Eeden Fredericus J.M.
Published: April 2023

PDF file - 56K, Table S1, shows relative increase in EGFP fluorescence levels of phd3: EGFP in vhl-/- embryos vs wild-type. Table S2 shows the effect of DMBA treatment on the rates of LOH for the vhl locus in 2.5 month old wild-type and vhl+/- fish. Table S3 shows the increased number of macroscopic phd3: GFP positive areas induced by DMBA vhl-/+ adults as compared to wild-type, they are likely to correspond to vhl-/- tumors. Table S4 shows preferential induction of renal tubule proliferation in vhl heterozygotes.
Supplementary Methods from INT6/EIF3E Interacts with ATM and Is Required for Proper Execution of the DNA Damage Response in Human Cells
Authors: Morris Christelle , Tomimatsu Nozomi , Richard Derek J. , Cluet David , Burma Sandeep , Khanna Kum Kum , Jalinot Pierre
Published: April 2023

PDF file - 99K
Supplementary Figure Legends 1-6 from The Unfolded Protein Response Induces the Angiogenic Switch in Human Tumor Cells through the PERK/ATF4 Pathway
Authors: Wang Yugang , Alam Goleeta N. , Ning Yu , Visioli Fernanda , Dong Zhihong , Nör Jacques E. , Polverini Peter J.
Published: April 2023

PDF file - 71K
Supplementary Figure 3 from The Unfolded Protein Response Induces the Angiogenic Switch in Human Tumor Cells through the PERK/ATF4 Pathway
Authors: Wang Yugang , Alam Goleeta N. , Ning Yu , Visioli Fernanda , Dong Zhihong , Nör Jacques E. , Polverini Peter J.
Published: April 2023

PDF file - 95K, UPR activation promotes expression of proangiogenic mediators in UM-SCC-11B and UM-SCC-17B cells
Supplementary Figure 4 from TRPM7 Is Required for Breast Tumor Cell Metastasis
Authors: Middelbeek Jeroen , Kuipers Arthur J. , Henneman Linda , Visser Daan , Eidhof Ilse , van Horssen Remco , Wieringa Bé , Canisius Sander V. , Zwart Wilbert , Wessels Lodewyk F. , Sweep Fred C.G.J. , Bult Peter , Span Paul N. , van Leeuwen Frank N. , Jalink Kees
Published: April 2023

PDF file - 643K, Rho-kinase inhibition rescues contractile and migratory phenotype of TRPM7 shRNA cells
Supplementary Figure 1 from The Unfolded Protein Response Induces the Angiogenic Switch in Human Tumor Cells through the PERK/ATF4 Pathway
Authors: Wang Yugang , Alam Goleeta N. , Ning Yu , Visioli Fernanda , Dong Zhihong , Nör Jacques E. , Polverini Peter J.
Published: April 2023

PDF file - 87K, Grp78 is overexpressed in human tumors
Supplementary Video Legends 1-8 from Iodide Transporter NIS Regulates Cancer Cell Motility and Invasiveness by Interacting with the Rho Guanine Nucleotide Exchange Factor LARG
Authors: Lacoste Claire , Hervé Julie , Bou Nader Myriam , Dos Santos Alexandre , Moniaux Nicolas , Valogne Yannick , Montjean Rodrick , Dorseuil Olivier , Samuel Didier , Cassio Doris , Portulano Carla , Carrasco Nancy , Bréchot Christian , Faivre Jamila
Published: April 2023

PDF file - 234K
Supplementary Video 8 from Iodide Transporter NIS Regulates Cancer Cell Motility and Invasiveness by Interacting with the Rho Guanine Nucleotide Exchange Factor LARG
Authors: Lacoste Claire , Hervé Julie , Bou Nader Myriam , Dos Santos Alexandre , Moniaux Nicolas , Valogne Yannick , Montjean Rodrick , Dorseuil Olivier , Samuel Didier , Cassio Doris , Portulano Carla , Carrasco Nancy , Bréchot Christian , Faivre Jamila
Published: April 2023

MOV file - 1.9MB, Time lapse video microscopy of Hek293 cells stably expressing NISwt and transfected with siRNA LARG
Supplementary Legends for Figures 1-7, Tables 1-2 from Tankyrase and the Canonical Wnt Pathway Protect Lung Cancer Cells from EGFR Inhibition
Authors: Casás-Selves Matias , Kim Jihye , Zhang Zhiyong , Helfrich Barbara A. , Gao Dexiang , Porter Christopher C. , Scarborough Hannah A. , Bunn Paul A. , Chan Daniel C. , Tan Aik Choon , DeGregori James
Published: April 2023

PDF file - 113K
Supplementary Video 5 from Iodide Transporter NIS Regulates Cancer Cell Motility and Invasiveness by Interacting with the Rho Guanine Nucleotide Exchange Factor LARG
Authors: Lacoste Claire , Hervé Julie , Bou Nader Myriam , Dos Santos Alexandre , Moniaux Nicolas , Valogne Yannick , Montjean Rodrick , Dorseuil Olivier , Samuel Didier , Cassio Doris , Portulano Carla , Carrasco Nancy , Bréchot Christian , Faivre Jamila
Published: April 2023

MOV file - 2.3MB, Time lapse video microscopy of CCLP1 cells transfected with siRNA
Supplementary Video 3 from Iodide Transporter NIS Regulates Cancer Cell Motility and Invasiveness by Interacting with the Rho Guanine Nucleotide Exchange Factor LARG
Authors: Lacoste Claire , Hervé Julie , Bou Nader Myriam , Dos Santos Alexandre , Moniaux Nicolas , Valogne Yannick , Montjean Rodrick , Dorseuil Olivier , Samuel Didier , Cassio Doris , Portulano Carla , Carrasco Nancy , Bréchot Christian , Faivre Jamila
Published: April 2023

MOV file - 490K, Time lapse video microscopy of HEK293 cells expressing the NISdeltaCter
Supplementary Figure 4 from Tankyrase and the Canonical Wnt Pathway Protect Lung Cancer Cells from EGFR Inhibition
Authors: Casás-Selves Matias , Kim Jihye , Zhang Zhiyong , Helfrich Barbara A. , Gao Dexiang , Porter Christopher C. , Scarborough Hannah A. , Bunn Paul A. , Chan Daniel C. , Tan Aik Choon , DeGregori James
Published: April 2023

PDF file - 240K, Demonstration that CK1alpha or CK2alpha knockdown results in enhanced sensitivity of NSCLC cells to gefitinib treatment, that these knockdowns reduce the expression of the corresponding proteins, that treatment with the CK1� activator pyrvinium pamoate acts synergistically with gefitinib to eliminate NSCLC cells, and specificity of this synergistic cell killing for NSCLC cells following EGFR inhibition
Supplementary Figure 3 from Tankyrase and the Canonical Wnt Pathway Protect Lung Cancer Cells from EGFR Inhibition
Authors: Casás-Selves Matias , Kim Jihye , Zhang Zhiyong , Helfrich Barbara A. , Gao Dexiang , Porter Christopher C. , Scarborough Hannah A. , Bunn Paul A. , Chan Daniel C. , Tan Aik Choon , DeGregori James
Published: April 2023

PDF file - 86K, Measurement of apoptosis and senescence parameters in H322C NSCLC cells treated with DMSO, gefitinib and/or the TNKS inhibitor XAV939.
Supplementary Figure 6 from NF-κB Hyperactivation in Tumor Tissues Allows Tumor-Selective Reprogramming of the Chemokine Microenvironment to Enhance the Recruitment of Cytolytic T Effector Cells
Authors: Muthuswamy Ravikumar , Berk Erik , Junecko Beth Fallert , Zeh Herbert J. , Zureikat Amer H. , Normolle Daniel , Luong The Minh , Reinhart Todd A. , Bartlett David L. , Kalinski Pawel
Published: April 2023

PDF file - 63K, Tregs are preferentially attracted by untreated tumors
Supplementary Figure Legends 1-4 from Interleukin-10 Ablation Promotes Tumor Development, Growth, and Metastasis
Authors: Tanikawa Takashi , Wilke Cailin Moira , Kryczek Ilona , Chen Grace Y. , Kao John , Núñez Gabriel , Zou Weiping
Published: April 2023

PDf file - 51K
Supplementary Figure 5 from NF-κB Hyperactivation in Tumor Tissues Allows Tumor-Selective Reprogramming of the Chemokine Microenvironment to Enhance the Recruitment of Cytolytic T Effector Cells
Authors: Muthuswamy Ravikumar , Berk Erik , Junecko Beth Fallert , Zeh Herbert J. , Zureikat Amer H. , Normolle Daniel , Luong The Minh , Reinhart Todd A. , Bartlett David L. , Kalinski Pawel
Published: April 2023

PDF file - 176K, Elevated expression of CXCL10 and CCL5 in liver metastases compared to normal liver tissues: role of NF-KappaB
Supplementary Figure Legends 1-2 from Potentiation of the Novel Topoisomerase I Inhibitor Indenoisoquinoline LMP-400 by the Cell Checkpoint and Chk1-Chk2 Inhibitor AZD7762
Authors: Aris Sheena M. , Pommier Yves
Published: April 2023

PDF file - 63K
Supplementary Figure 3 from NF-κB Hyperactivation in Tumor Tissues Allows Tumor-Selective Reprogramming of the Chemokine Microenvironment to Enhance the Recruitment of Cytolytic T Effector Cells
Authors: Muthuswamy Ravikumar , Berk Erik , Junecko Beth Fallert , Zeh Herbert J. , Zureikat Amer H. , Normolle Daniel , Luong The Minh , Reinhart Todd A. , Bartlett David L. , Kalinski Pawel
Published: April 2023

PDF file - 190K, (A-B): Combination of indomethacin, IFNa and poly-I:C induces the optimal pattern of chemokine expression in isolated cell cultures. (C-D): Combination of IFNa, poly-I:C and cyclooxygenase blockade is needed for the optimal and consistent modulation of chemokine production in metastatic colorectal cancer lesions
Supplementary Tables 1-3, Figure 1 from Genetic Determinants for Promoter Hypermethylation in the Lungs of Smokers: A Candidate Gene-Based Study
Authors: Leng Shuguang , Stidley Christine A. , Liu Yushi , Edlund Christopher K. , Willink Randall P. , Han Younghun , Landi Maria Teresa , Thun Michael , Picchi Maria A. , Bruse Shannon E. , Crowell Richard E. , Van Den Berg David , Caporaso Neil E. , Amos Christopher I. , Siegfried Jill M. , Tesfaigzi Yohannes , Gilliland Frank D. , Belinsky Steven A.
Published: April 2023

PDF file - 642K
Supplementary Tables 1-6 from Gastrointestinal Adenocarcinomas of the Esophagus, Stomach, and Colon Exhibit Distinct Patterns of Genome Instability and Oncogenesis
Authors: Dulak Austin M. , Schumacher Steven E. , van Lieshout Jasper , Imamura Yu , Fox Cameron , Shim Byoungyong , Ramos Alex H. , Saksena Gordon , Baca Sylvan C. , Baselga Jose , Tabernero Josep , Barretina Jordi , Enzinger Peter C. , Corso Giovanni , Roviello Franco , Lin Lin , Bandla Santhoshi , Luketich James D. , Pennathur Arjun , Meyerson Matthew , Ogino Shuji , Shivdasani Ramesh A. , Beer David G. , Godfrey Tony E. , Beroukhim Rameen , Bass Adam J.
Published: April 2023

PDF file - 134K
Supplementary Figure Legends 1-3 from Integrin α5β1 Plays a Critical Role in Resistance to Temozolomide by Interfering with the p53 Pathway in High-Grade Glioma
Authors: Janouskova Hana , Maglott Anne , Leger David Y. , Bossert Catherine , Noulet Fanny , Guerin Eric , Guenot Dominique , Pinel Sophie , Chastagner Pascal , Plenat François , Entz-Werle Natacha , Lehmann-Che Jacqueline , Godet Julien , Martin Sophie , Teisinger Jan , Dontenwill Monique
Published: April 2023

PDF file - 85K
Supplementary Figure Legends 1-2 from Clinicopathological Features of Homologous Recombination–Deficient Epithelial Ovarian Cancers: Sensitivity to PARP Inhibitors, Platinum, and Survival
Authors: Mukhopadhyay Asima , Plummer Elizabeth R. , Elattar Ahmed , Soohoo San , Uzir Bisha , Quinn Jennifer E. , McCluggage W. Glenn , Maxwell Perry , Aneke Harriet , Curtin Nicola J. , Edmondson Richard J.
Published: April 2023

PDF file - 70K
Supplementary Figure 1 from Clinicopathological Features of Homologous Recombination–Deficient Epithelial Ovarian Cancers: Sensitivity to PARP Inhibitors, Platinum, and Survival
Authors: Mukhopadhyay Asima , Plummer Elizabeth R. , Elattar Ahmed , Soohoo San , Uzir Bisha , Quinn Jennifer E. , McCluggage W. Glenn , Maxwell Perry , Aneke Harriet , Curtin Nicola J. , Edmondson Richard J.
Published: April 2023

PDF file - 103K, HR status and correlation with ex vivo cytotoxicity to PARP inhibitors. A, schema outlining study demontrating tight correlation between HR deficiency and sensitivity to PARP inhibitor for both epithelial EOCs and other HRD cancers b, bar graph showing increase in RAD51 foci formation compared to untreated control and cell survival following PARP treatment for each individual primary culture. Cultures demonstrating high levels of RAD51 foci (HR competent) showed highest levels of cell survival following treatment.
Supplementary Figure 6 from Cyclin D1 Activity Regulates Autophagy and Senescence in the Mammary Epithelium
Authors: Brown Nelson E. , Jeselsohn Rinath , Bihani Teeru , Hu Miaofen G. , Foltopoulou Parthena , Kuperwasser Charlotte , Hinds Philip W.
Published: April 2023

PDF file - 135K, shRNA-mediated knockdown of Beclin-1
Supplementary Movie Legend from FRMD4A Upregulation in Human Squamous Cell Carcinoma Promotes Tumor Growth and Metastasis and Is Associated with Poor Prognosis
Authors: Goldie Stephen J. , Mulder Klaas W. , Tan David Wei-Min , Lyons Scott K. , Sims Andrew H. , Watt Fiona M.
Published: April 2023

PDF file - 42K
Supplementary Figures 1-8 from Hepatocyte–Stellate Cell Cross-Talk in the Liver Engenders a Permissive Inflammatory Microenvironment That Drives Progression in Hepatocellular Carcinoma
Authors: Coulouarn Cédric , Corlu Anne , Glaise Denise , Guénon Isabelle , Thorgeirsson Snorri S. , Clément Bruno
Published: April 2023

PDF file - 985K
Supplementary Methods from Estrogen Promotes ER-Negative Tumor Growth and Angiogenesis through Mobilization of Bone Marrow–Derived Monocytes
Authors: Iyer Vandana , Klebba Ina , McCready Jessica , Arendt Lisa M. , Betancur-Boissel Monica , Wu Meng-Fen , Zhang Xiaomei , Lewis Michael T. , Kuperwasser Charlotte
Published: April 2023

PDF file - 116K
Supplementary Figure 3 from Mre11-Dependent Degradation of Stalled DNA Replication Forks Is Prevented by BRCA2 and PARP1
Authors: Ying Songmin , Hamdy Freddie C. , Helleday Thomas
Published: April 2023

PDF file - 84K, BRCA2 is not required for restart of stalled replication forks
Supplementary Figures 1-10 from ZNF217 Is a Marker of Poor Prognosis in Breast Cancer That Drives Epithelial–Mesenchymal Transition and Invasion
Authors: Vendrell Julie A. , Thollet Aurélie , Nguyen Nhan T. , Ghayad Sandra E. , Vinot Stéphanie , Bièche Ivan , Grisard Evelyne , Josserand Véronique , Coll Jean-Luc , Roux Pierre , Corbo Laura , Treilleux Isabelle , Rimokh Ruth , Cohen Pascale A.
Published: April 2023

PDF file - 3.2MB, complementary figures showing the impact of ZNF217 overexpression on MDA-MB-231 and HMLE cells phenotype
Supplementary Figure Legends 1-5 from CD24 Is an Effector of HIF-1–Driven Primary Tumor Growth and Metastasis
Authors: Thomas Shibu , Harding Michael A. , Smith Steven C. , Overdevest Jonathan B. , Nitz Matthew D. , Frierson Henry F. , Tomlins Scott A. , Kristiansen Glen , Theodorescu Dan
Published: April 2023

PDF file - 90K
Supplementary Figure 3 from Differential Effects of Polymorphic Alleles of FGF Receptor 4 on Colon Cancer Growth and Metastasis
Authors: Heinzle Christine , Gsur Andrea , Hunjadi Monika , Erdem Zeynep , Gauglhofer Christine , Stättner Stefan , Karner Josef , Klimpfinger Martin , Wrba Friedrich , Reti Andrea , Hegedus Balazs , Baierl Andreas , Grasl-Kraupp Bettina , Holzmann Klaus , Grusch Michael , Berger Walter , Marian Brigitte
Published: April 2023

PDF file - 48K, Shows impact of FGFR4 overexpression on cell viability
Supplementary Figure 3 from RANK Induces Epithelial–Mesenchymal Transition and Stemness in Human Mammary Epithelial Cells and Promotes Tumorigenesis and Metastasis
Authors: Palafox Marta , Ferrer Irene , Pellegrini Pasquale , Vila Sergi , Hernandez-Ortega Sara , Urruticoechea Ander , Climent Fina , Soler Maria Teresa , Muñoz Purificación , Viñals Francesc , Tometsko Mark , Branstetter Dan , Dougall William C. , González-Suárez Eva
Published: April 2023

PDF file - 72K, RANK overexpression induces mammary stem markers
Supplementary Figure 4 from Stromal Progenitor Cells from Endogenous Adipose Tissue Contribute to Pericytes and Adipocytes That Populate the Tumor Microenvironment
Authors: Zhang Yan , Daquinag Alexes C. , Amaya-Manzanares Felipe , Sirin Olga , Tseng Chieh , Kolonin Mikhail G.
Published: April 2023

PDF file - 134K, Populations of GFP+ and RFP+ cells in mouse tissues and their contribution to tumors
Supplementary Figures 1 - 4 from Targeting the Transposase Domain of the DNA Repair Component Metnase to Enhance Chemotherapy
Authors: Williamson Elizabeth A. , Damiani Leah , Leitao Andrei , Hu Chelin , Hathaway Helen , Oprea Tudor , Sklar Larry , Shaheen Montaser , Bauman Julie , Wang Wei , Nickoloff Jac A. , Lee Suk-Hee , Hromas Robert
Published: April 2023

PDF file - 670K, Figure S1. The composite approach for in silico compound selection. Figure S2. Superposition of the 3D structures of Metnase (model, blue) and MOS-1 active sites (2F7T, orange). Figure S3. Comparison between two metnase structures Figure S4. Electrostatic surface of the metnase Transposase domain.
Supplementary Tables 1-4 from Targeting the EWSR1-FLI1 Oncogene-Induced Protein Kinase PKC-β Abolishes Ewing Sarcoma Growth
Authors: Surdez Didier , Benetkiewicz Magdalena , Perrin Virginie , Han Zhi-Yan , Pierron Gaëlle , Ballet Stelly , Lamoureux François , Rédini Françoise , Decouvelaere Anne-Valérie , Daudigeos-Dubus Estelle , Geoerger Birgit , de Pinieux Gonzague , Delattre Olivier , Tirode Franck
Published: April 2023

XLS file - 3.4MB, Expression profiles analyses and primer table
Supplementary Table 1 from Induction of the Stem-like Cell Regulator CD44 by Rho Kinase Inhibition Contributes to the Maintenance of Colon Cancer–Initiating Cells
Authors: Ohata Hirokazu , Ishiguro Tatsuya , Aihara Yuki , Sato Ai , Sakai Hiroaki , Sekine Shigeki , Taniguchi Hirokazu , Akasu Takayuki , Fujita Shin , Nakagama Hitoshi , Okamoto Koji
Published: April 2023

PDF file - 100K, Information on clinical data and spheroid formation
Supplementary Figure 4 from CD44s Regulates the TGF-β–Mediated Mesenchymal Phenotype and Is Associated with Poor Prognosis in Patients with Hepatocellular Carcinoma
Authors: Mima Kosuke , Okabe Hirohisa , Ishimoto Takatsugu , Hayashi Hiromitsu , Nakagawa Shigeki , Kuroki Hideyuki , Watanabe Masayuki , Beppu Toru , Tamada Mayumi , Nagano Osamu , Saya Hideyuki , Baba Hideo
Published: April 2023

PDF file - 1.4MB, TGF-beta signaling did not induce the expression of CD133 in HCC cells
Supplementary Figure 2 from Metastatic Progression with Resistance to Aromatase Inhibitors Is Driven by the Steroid Receptor Coactivator SRC-1
Authors: McBryan Jean , Theissen Sarah M. , Byrne Christopher , Hughes Eamon , Cocchiglia Sinead , Sande Stephen , O'Hara Jane , Tibbitts Paul , Hill Arnold D.K. , Young Leonie S.
Published: April 2023

PDF file - 154K
Supplementary Table 1 from Candidate Pathways for Promoting Differentiation or Quiescence of Oligodendrocyte Progenitor-like Cells in Glioma
Authors: Dougherty Joseph D. , Fomchenko Elena I. , Akuffo Afua A. , Schmidt Eric , Helmy Karim Y. , Bazzoli Elena , Brennan Cameron W. , Holland Eric C. , Milosevic Ana
Published: April 2023

XLS file - 6.3MB, Lists of cell-type specific and enriched messages for all four cell types. Four worksheets contain those genes specific to, or highly enriched in one of the four cell types (Specificity index p value <.05). The fifth worksheet has all data for all genes. SI: Specificity index. pSI: Specificity Index p-Value