bluuebunny/crossref_metadata_2025 huggingface dataset:
Gender-related response of lipid metabolism to dietary fatty acids in the hamster
Authors: Morise Anne , Mourot Jacques , Boué Carole , Combe Nicole , Amsler Ghislaine , Gripois Daniel , Quignard-Boulangé Annie , Yvan-Charvet Laurent , Fénart Evelyne , Weill Pierre , Hermier Dominique
Published: March 2006

Gender and dietary fatty acids are involved in the regulation of lipid metabolism, disturbances of which can lead to pathologies such as metabolic syndrome or CVD. Possible interactions between these factors were investigated in male and female hamsters fed diets rich in either saturated fatty acids (‘butter’ diet) or in α-linolenic acid (‘linseed oil’ diet). Gender effect predominated over the diet effect on cholesterol (CH) metabolism; compared to males, females exhibited lower concentrations of plasma total CH (−20%,P<0·001), LDL-CH (−40%,P<0·001) and HDL-CH (−16%,P<0·001), together with higher LDL receptor (+40%) and lower HDL receptor (−60%) hepatic content. Triacylglycerol (TG) metabolism was affected by diet above all: compared to animals fed the ‘butter’ diet, those fed the ‘linseed oil’ diet exhibited lower plasma (−23%,P=0·046) and liver TG (−20%,P=0·026) concentration which may result from both an increased β-oxidation (P<0·001), without any change in PPARα mRNA, and a decreased hepatic lipogenesis (P=0·023), without increased sterol response element binding protein 1c (SREBP1c) mRNA. The response to diet was much more pronounced in males than in females, without gender effect on the transcription level of PPARα and SREBP1c. Finally, the ‘linseed oil’ diet decreased the insulin resistance index (−80%,P<0·001) with a more marked effect in males, in relation to their higher hepatic PPARγ expression (+90%,P=0·012). In conclusion, in our model, the response of either TG or CH to dietary fatty acids is modulated differently by gender. The possible relevance of these interactions to dietary practice should be taken into account in man.
Iron solubility compared with in vitro digestion–Caco-2 cell culture method for the assessment of iron bioavailability in a processed and unprocessed complementary food for Tanzanian infants (6–12 months)
Authors: Pynaert Ilse , Armah Charlotte , Fairweather-Tait Susan , Kolsteren Patrick , van Camp John , Henauw Stefaan De
Published: March 2006

The Fe solubility test is a commonly used, easy and relatively cheap in vitro tool for predicting Fe bioavailability in food matrices. However, the outcome of a recent field trial comparing the effect on Fe status of Tanzanian infants of processed V. unprocessed complementary foods (CF), with otherwise the same composition, challenged the validity of this test for predicting Fe bioavailability. In the solubility test, significant more soluble Fe was observed in processed compared with unprocessed foods (mean 18·8 (sem 0·21) V. 4·8 (sem 0·23) %; V<0·001). However, in the field trial, no significant difference in Fe status was seen between processed and unprocessed CF groups after 6 months' follow-up. Therefore, twenty-four samples of these CF (twelve processed and twelve unprocessed batches) were analysed in triplicate for Fe availability using an in vitro digestion–Caco-2 cell culture method and results were compared with solubility results. Significantly more soluble Fe was presented to Caco-2 cells in the processed compared with unprocessed samples (mean 11·5 (sem 1·16) V. 8·5 (sem 2·54) % p=0·028), but proportionally less Fe was taken up by the cells (mean 3·0 (sem 0·40)p. 11·7 (sem 2·22) %; p=0·007). As a net result, absolute Fe uptake was lower (not significantly) in processed compared with unprocessed CF (mean 1·3 (sem 0·16) V. 3·4 (sem 0·83) nmol/mg cell protein; p=0·052). These data clearly demonstrate that the Fe solubility test was not a good indicator of Fe bioavailability in these particular food matrices. In contrast, the results of an in vitro Caco-2 model supported the effects observed in vitro.
Acute postprandial effect of hydrogenated fish oil, palm oil and lard on plasma cholesterol, triacylglycerol and non-esterified fatty acid metabolism in normocholesterolaemic males
Authors: Cantwell Marie M. , Flynn Mary A.T. , Gibney Michael J.
Published: March 2006

The majority of research has focused on the association betweentransunsaturated fatty acids (TUFA) from hydrogenated vegetable oils and heart disease even though TUFA are also produced from hydrogenated fish oil. We compared the acute effect of three solid fats on postprandial cholesterol, triacylglycerol (TAG) and NEFA concentrations in normocholesterolaemic males. Eight healthy male volunteers consumed each of the three 40g fat meals (partially hydrogenated fish oil (PHFO), palm oil and lard) in random order and blood samples were drawn at 2, 4, 6 and 8h thereafter for lipid analysis. The postprandial response in plasma TAG, TAG-rich lipoprotein-TAG (TRL-TAG), total cholesterol and plasma NEFA, measured as the area under the postprandial curve, was not significantly different between the three meals (p>0·05), which varied in MUFA, PUFA and TUFA content. There was no marked elevation of longer-chain fatty acids (C20–22,cisortransisomers) into the TRL-TAG fraction following the PHFO meal even though they provided 40% of the total fatty acids in the PHFO meal. The postprandial TRL-TAG response to PHFO was expected to be higher, as it is higher in TUFA, lower in PUFA and similar in saturated fatty acid composition compared with the lard and palm oil test meals. The absence of a higher postprandial response following ingestion of PHFO could be as a result of reduced absorption and increased oxidation of long-chain fatty acids (bothcisandtransisomers)
Satiety and substrate mobilization after oral fat stimulation
Authors: Smeets Astrid J. P. G. , Westerterp-Plantenga Margriet S.
Published: March 2006

The aim of the study was to provoke cephalic and metabolic responses by oral fat stimulation with different high-fat meals in the postprandial state. A randomized parallel design was executed with three groups of subjects (twenty-six women and ten men; twelve subjects per group). Oral fat stimulation was achieved by the modified sham feeding (MSF) technique. Five hours after a high-fat breakfast, the subjects were given one of three test meals in random order: a high-fat lunch, water or the same lunch as the MSF. The main fat sources in the high-fat lunch and MSF were olive oil, linoleic oil and oleic oil. For 3h after the test meal, blood samples were taken for analysis of metabolite, and visual analogue scales of appetite profile were completed. A cephalic response appeared to be achieved by MSF in that we observed a relative increase in insulin and glucose; this response lasted up until 90min, indicating possible vagal stimulation. NEFA increased significantly after MSF compared with water ingestion in the case of olive oil (p<0·0001) and linoleic oil (p<0·05), but not with oleic oil. MSF provoked a significantly higher increase in triacylglycerol and glycerol levels compared with water ingestion in the case of linoleic oil (p<0·05). Satiety was significantly increased in the eating condition and in the MSF condition (p<0·0002, all oils) compared with water ingestion. We conclude that cephalic and perhaps vagal stimulation by different fats increased the concentrations of the metabolites and stimulated satiety, with linoleic oil showing the strongest response.
Eicosapentaenoic acid and 3,10 dithia stearic acid inhibit the desaturation oftrans-vaccenic acid intocis-9,trans-11-conjugated linoleic acid through different pathways in Caco-2 and T84 cells
Authors: Bénédicte Renaville , Mullen Anne , Moloney Fiona , Larondelle Yvan , Schneider Yves-Jacques , Roche Helen M.
Published: March 2006

Stearoyl-CoA desaturase (SCD) is a key enzyme that determines the composition and metabolic fate of ingested fatty acids, in particular the conversion oftrans-vaccenic acid (TVA) to conjugated linoleic acid (CLA). The present study addressed the hypothesis that intestinal TVA absorption and biotransformation into CLA can be modulated by EPA and 3,10-dithia stearic acid (DSA) via altered SCD mRNA levels and desaturation indices (cis-9,trans-11-CLA:TVA and oleic acid:stearic acid ratios) in Caco-2 and T84 cells, two well-establishedin vitromodels of the human intestinal epithelium. The study determined the effect of acute (3h with 0·3mm-EPA or 0·3mm-DSA) and acute-on-chronic (1 week with 0·03mm-EPA or -DSA, followed by respectively, 0·3mm-EPA or -DSA for 3h) treatments. In both cell lines, acute EPA treatment did not alter SCD desaturation indices, whereas the acute-on-chronic treatment affected these surrogate markers of SCD activity. This was associated with reduced sterol regulatory-element binding protein-1c and SCD mRNA levels. In contrast, acute and acute-on-chronic DSA treatments significantly reduced SCD desaturation indices without affecting SCD mRNA levels in Caco-2 cells. The present study on intestinal cells shows that the conversion rate of TVA to c9, t11-CLA is affected by other fatty acids present in the diet such as EPA, confirming previous observations in hepatic and mammary cell models.
Intraspecific variation in morphological, sensory and nutritional characteristics of Dacryodes edulis fruits in West and Central Africa
Authors: Kengni E. , Tchouanguep M. F. , Mbofung C. M. F. , Tchoundjeu Z. , Asaah K. E.
Published: March 2006

Six distinct market samples of Dacryodes edulis (safou/African plum) with different fruit colour were characterized in terms of morphological, sensory and nutritional traits that can guide the selection of high-value individual trees for cultivar development. The morphological characteristics assessed were: fruit length, fruit width, fruit and flesh weights, flesh thickness and pulp/fruit ratio, while the sensory characteristics were: acidity, aroma astringency, bitterness, oiliness, preference, fibrousness and sourness. In addition, the biochemical composition (carbohydrates, ash, protein, lipids, dietary fibres, vitamin C, iron, calcium and phosphorus contents) was determined. These attributes all showed great variability, suggesting their importance in the identification of multi-trait ideotypes for potential cultivar development.
Changes in the genetic diversity of barley of Nordic and Baltic origin, studied by isozyme electrophoresis
Authors: Brantestam Agnese Kolodinska , von Bothmer Roland , Rashal Isaak , Weibull Jens
Published: March 2006

In this study an evaluation was made of changes in the genetic variation of barley (Hordeum vulgare L.) of Nordic and Baltic origin, from the end of the 19th century until today. A comparison of Nordic and Baltic material with exotic material that has not been subjected to intense selection was also made. A total of 293 accessions, including 160 Nordic and 80 Baltic landraces, cultivars and breeding lines, and another 53 landraces of exotic origin (Central Asia), were surveyed using isozyme starch gel electrophoresis. For the four isozymes studied, 28 alleles at 11 loci were observed. The average total genetic diversity value (HT) for individual loci ranged between 0 and 0.519. In the exotic material nine loci were polymorphic and two monomorphic, compared to seven polymorphic and four monomorphic loci in the Nordic and Baltic material. Some of the rare alleles were detected only in the exotic material. The studied isozyme loci of Nordic and Baltic material indicated that modern cultivars have a lower average genetic diversity value compared to the landraces, old and exotic material.
Plant genetic resources and molecular markers: variety registration in a new era
Authors: Cooke Robert J. , Reeves James C.
Published: March 2006

Variety registration is an important area of plant genetic resource characterization and utilization. Within the European Union, varieties must be included on a National List (NL) of a member state or on the Common Catalogue (a compilation of the NLs of the member states) before seed can be sold. This requires a series of tests and trials which assess if the variety is distinct, uniform and stable (DUS) and if it has sufficient value for cultivation and use (VCU). The same DUS criteria are also used world-wide for the granting of Plant Breeders' Rights (PBR), an intellectual property protection system. Both DUS and VCU are currently assessed primarily using field-based trials. However, the potential use of biochemical and molecular markers for DUS purposes is being actively investigated and such markers could have an important role to play in maintaining the quality and scope of PBR in an environment where the increasing number of countries involved in DUS testing and the number of variety comparisons to be made are causing logistical difficulties. More recently, given firstly the increase in the availability of markers from expressed regions of the genome, and secondly the possibilities raised by detailed DNA sequencing programmes and the association of markers (particularly single nucleotide polymorphisms, SNPs) with specific genes, the prospects for a more molecular approach to VCU are also being discussed. This paper reviews the current situation with regard to the use of molecular markers for DUS and VCU testing and considers future prospects for variety registration in the 21st century, ‘-omics’, era.
Intellectual Property Rights on varieties and access to plant genetic resources: towards a coherent and an ethically based approach
Authors: Feyt H.
Published: March 2006

The concept of Intellectual Property Rights (IPRs) is a very old one, dating as far back as Ancient Greek times. A specific system of IPRs for living organisms was adopted internationally for the first time, for plant varieties, in 1961, through the UPOV Convention. Progress in the field of biotechnology in the 1970s was the starting point for extensive debate on the patenting of living material among both the scientific community and in public fora, resulting in several independent international agreements which, in turn, contributed to the evolution of the Patent System for gene protection and of the statute of plant genetic resources. But, in their current state, the provisions of these various agreements are not globally coherent and, more particularly, conflict specifically with plant varieties and genetic resources. The questions could be solved by generalizing the cornerstone principle of the UPOV Convention, i.e. the free use of genetic variability, which seems to meet the demand of the scientific community.
Development of new marker methods—an example from oil palm
Authors: Price Zuzana , Schulman Alan H. , Mayes Sean
Published: March 2006

This paper reviews marker methods based on retrotransposons and illustrates examples from oil palm. Prior to this study, very little had been known about the repetitive DNA present in oil palm and no marker systems based on retrotransposons had been developed. Firstly,copialike retrotransposons ofElaeis oleifera, Elaeis guineensisandCocos nuciferawere characterized by performing phylogenetic analyses on a portion of the reverse transcriptase (RT) gene ofcopia-like retrotransposons. The results identified three classes ofcopia-like retrotransposons in the three species studied. While the C-class RT sequences seemed to have amplified preferentially only inElaeis guineensis, the classes A and B were present inElaeis guineensisandCocos nuciferaas well. Secondly, long terminal repeats (LTRs) from these retrotransposon classes were isolated as a prelude to developing a marker system in palm based on retrotransposons. The B- and C-class LTRs were isolated by primer walking from the RT region and the B-class fromElaeis oleiferaandCocos nuciferawith the use of oil palm-specific RnaseH primers. The method has been developed and applied for breeding purposes in oil palm, hybrids betweenE. oleiferaandE. guineensisand within the tribe Cocoeae. There is scope for the method to be used in the isolation of new retrotransposon families endogenous for each palm species and as an alternative to amplified fragment length polymorphism (AFLP) in diversity studies within the Palmae.
A strategy for selecting diverse accessions using Principal Component Analysis from a large germplasm collection of soybean
Authors: Sapra R. L , Lal S. K.
Published: March 2006

We suggest a diversity-dependent strategy, based on Principle Component Analysis, for selecting distinct accessions/parents for breeding from a soybean germplasm collection comprising of 463 lines, characterized and evaluated for 10 qualitative and eight quantitative traits. A sample size of six accessions included all the three states, namely low, medium and high of the individual quantitative traits, while a sample of 16–19 accessions included all the 60–64 distinct states of qualitative as well as quantitative traits. Under certain assumptions, the paper also develops an expression for estimating the size of a target population for capturing maximum variability in a sample three accessions.
Applications of bulking in molecular characterization of plant germplasm: a critical review
Authors: Fu Yong-Bi
Published: March 2006

Characterization of plant germplasm using molecular techniques is playing an increasingly important role in the management and utilization of plant genetic resources, but has its limitations in the screening of large numbers of accessions held in seed genebanks worldwide. Bulking individual plants from one accession or group to form a representative sample is a promising approach to widening the scope of a characterization, but it is not without technical problems in detecting genetic variation. This review was conducted to assess the technical pitfalls of bulking, and to evaluate the effectiveness of various bulking methods in the assessment of genetic variation and genetic relationships, and in the identification of plant germplasm. Clearly, some alleles, particularly those occurring at low frequency, may go undetected in a bulked sample, depending on the bulking methods and the molecular techniques used. As a result, genetic diversity estimates and genetic relationship inferences can be significantly biased. Germplasm identification may not be always reliable. Thus, it is imperative that the detection limit imposed by bulking be assessed for a newly initiated molecular germplasm characterization and bias be considered in interpretation of the resulting characterization data. Equally imperative is the need for continuous efforts of exploring efficient bulking procedures for the screening of large germplasm collections, particularly by the newly developed marker systems.
Genetic diversity of Chinese and Swedish rapeseed (Brassica napusL.) analysed by inter-simple sequence repeats (ISSRs)
Authors: Chao-zhi M. A. , Ting-dong F. U. , Tuevesson Stine , Gertsson Bo
Published: March 2006

We have compared the genetic diversity of 24 Chinese weak-winter, Swedish winter and spring Brassica napus accessions by inter-simple sequence repeats (ISSRs). Using cluster analysis (UPGMA) based on 125 polymorphism bands amplified with 20 primers, the 24 accessions were divided into three groups. Six Swedish winter lines and eight Chinese weak-winter lines were in group I and group II consisted of two Chinese weak-winter lines, Xiangyou15 and Bao81. The third group contained eight Swedish spring lines. Principal coordinates (PCO) analysis showed similar groupings to cluster analysis. Results from cluster analysis and PCO analysis showed very clearly that Chinese weak-winter, Swedish spring and winter accessions were distinguished from each other and Chinese weak-winter accessions in this study were genetically closer to Swedish winter accessions than to Swedish spring accessions. The Chinese weak-winter accessions had larger diversity than the Swedish spring or winter accessions. This study indicated that ISSR is a suitable and effective tool to evaluate genetic diversity among rapeseed germplasm.
Preliminary study on geographical distribution and evolutionary relationships between cultivated and wild adzuki bean (Vigna angularisvar.angularisand var.nipponensis) by AFLP analysis
Authors: Xu-xiao Zong , Vaughan Duncan , Tomooka Norihiko , Kaga Akito , Xin-wang Wang , Jian-ping Guan , Shu-min Wang
Published: March 2006

A set of 146 representative adzuki (Vigna angularis var. angularis and var. nipponensis) germplasm from six Asian countries with a tradition of adzuki bean production, together with an outgroup standard rice bean (Vigna umbellata), were analysed by amplified fragment length polymorphism (AFLP) methodology using 12 informative primer pairs. A total of 313 unambiguous polymorphic bands were created. According to the dendrogram, using cluster analysis based on AFLP banding, 143 of the accessions were distinct and revealed enough genetic diversity for identification and classification of accessions withinVigna angularis. A neighbour-joining tree was generated using the newly developed Innan's nucleotide diversity estimate from the AFLP data. From analysis, seven distinct evolutionary groups, named ‘Chinese cultivated’, ‘Japanese cultivated’, ‘Japanese complex-Korean cultivated’, ‘Chinese wild’, ‘China Taiwan wild’, ‘Nepal- Bhutan cultivated’ and ‘Himalayan wild’, were detected. Nucleotide diversity with geographical distribution of each group is discussed, regarding the evolutionary relationships between wild and cultivated adzuki beans. The preliminary results indicated that cultivated adzuki beans have been domesticated from at least four progenitors with at least three geographical origins.
Allozymic Markers and Genetic Characterization of a Natural Population of Vriesea friburgensis var. Paludosa, a Bromeliad from the Atlantic Forest
Authors: Alves G. M. , Filho A. R. , Puchalski A. , Reis M. S. , Nodari R. O. , Guerra M. R.
Published: March 2006

A natural population of Vriesea friburgensis var. paludosa was genetically and demographically characterized. Four selected enzymatic systems were used. In total, 10 allozymic loci were analysed. The proportion of polymorphic loci was 70% and the number of alleles per locus was 2.3· The mean observed and expected heterozygosities were 0.234 and 0.226, respectively. An excess of heterozygotes was revealed by the value of the fixation index (—0.035). These indices showed the presence of high levels of genetic diversity in the population studied. A demographic survey revealed almost six times more vegetative than sexually reproductive plants. Reproductive plants were found only in clusters. The genetic diversity exhibited by this population, associated with vegetative as well as sexual propagation, resulting in clusters or colonies, would allow the employment of a sustainable management strategy for species conservation as well as its exploitation as an ornamental.
Genetic Diversity in the Brazilian Species of Adesmia DC (Leguminosae) as Assessed by RAPD
Authors: Dias Paula Menna Barreto , Dall'Agnol Miguel , Schifino-Wittmann Maria Teresa
Published: March 2006

The 17 Brazilian species of Adesmia DC were analysed, using 20 primers, with regard to their randomly amplified polymorphic DNA (RAPD) patterns. From a total of 357 individuals analysed, the 20 primers produced 2249 fragments with molecular sizes ranging from 200 to 2700 bp, 56% of which were polymorphic. Average intra-population genetic similarity, estimated by Jaccard's coefficient, ranged from 0.35 in A. araujoi to 0.80 in A. punctata. Mean intra-specific genetic similarity varied greatly among species, ranging from 0.19 for A. tristis to 0.89 for A. arillata. Mean genetic similarity among the species, estimated by Dice's coefficient, was 0.56. RAPD markers were efficient at separating all the accessions analysed. The results obtained generally agreed with the partition of genetic variability expected according to the mode of reproduction.
Plant Genetic Resources in Crop Improvement
Authors: Haussmann B. I. G. , Parzies H. K. , Presterl T. , Sušić Z. , Miedaner T.
Published: March 2006

The use of plant genetic resources (PGR) in crop improvement, followed by adoption, cultivation and consumption or marketing of the improved cultivars by farmers, is one of the most sustainable methods to conserve valuable genetic resources for the future, and simultaneously to increase agricultural production and food security. The objective of this review is to summarize issues related to the use of PGR in crop improvement. Specific topics are: definition of genetic resources for crop improvement; information sources on the internet; documentation and evaluation of PGR; access to PGR, equitable sharing of profits, and material transfer agreements; impediments to the use of PGR in crop improvement; classical methods of using PGR in crop improvement (introgression, incorporation, prebreeding and wide crosses); use of landraces in breeding for specific adaptation to stress environments; utility of molecular markers and genomic research for using PGR in crop improvement (diversity assessment, mapping of quantitative trait loci (QTL) and marker-assisted selection (MAS), advanced backcross QTL analysis and introgression libraries, association studies and direct allele selection); and gene transfer. Practical examples or experimental results are given for most aspects.
DNA Polymorphism Among Blackgram (Vigna Mungo L Hepper) Genotypes Using Inter-Simple Sequence Repeat (ISSR) Markers
Authors: Ranade Ruta , Gopalakrishna T.
Published: March 2006

The technique of inter-simple sequence repeat-polymerase chain reaction (ISSR-PCR) was used to fingerprint blackgram (Vigna mungo) genotypes in order to differentiate them at a molecular level. Twenty-four primers were used to analyse 11 blackgram genotypes. The genotypes used in the study could be differentiated based on combined amplification profiles generated by two primers (UBC primer numbers 808 (AG)8C and 826 (AC)8C). It was observed that 3′-anchored repeat primers based on (AG) and (GA) repeats amplified a greater number of bands than 3′-anchored repeat primers of (CA) and (AC) repeats. This result perhaps indicates that GA/AG repeats are more frequent than CA/AC repeats in the blackgram genome.
Agricultural Sustainability and Underutilized Crop Species in Southern Italy
Authors: Polignano G. B. , Laghetti G. , Margiotta B. , Perrino P.
Published: March 2006

The concept of agro-sustainability is presented and discussed. The paper shows that sustainable farming practices, sustainable development and the preservation of biological diversity require adequate valorization of local biodiversity. Special emphasis is given to neglected and underutilized crop species. The role and importance of these plants, including primitive wheat, wild anise, food legumes, several vegetables and forage legumes in southern Italy is presented. Each case is presented as an example of cultivation linked to different aspects of utilization, conservation, genetic erosion, and of their potential for sustainable agriculture.
The potential of enhanced germplasm for mungbean (Vigna radiata (L.) Wilczek) improvement
Authors: Bisht I. S. , Bhat K. V. , Lakhanpaul S. , Biswas B. K. , Ram B. , Tanwar S. P. S.
Published: March 2006

Mungbean (Vigna radiata (L.) Wilczek), also known as greengram, is the most widely cultivated Asian Vigna species. Improved mungbean cultivars have a narrow genetic base that limits yield potential and they are poorly adapted to varying growth conditions in different agro-ecological conditions. The genetic potential of landrace germplasm accessions in gene- banks therefore needs to be better exploited. Germplasm core collections are made of a reduced set of representative accessions from the entire diversity maintained by genebanks. This subset of accessions can be used for testing general combining ability with local germplasm in the search for yield enhancement. Core collections also help breeders in selecting parental material that could maximize potential genetic gain from derived hybrid populations. At the National Bureau of Plant Genetic Resources (NBPGR), India, genetic enhancement/pre- breeding studies in mungbean have been initiated involving diverse parents mainly from the cultivated gene pool, using the Bureau's core collection as starting material. Germplasm enhancement aims at widening the genetic base of breeding materials by transferring desired genes from unimproved germplasm into enhanced varieties. Mild and decentralized selected material was maintained in target sites across the country. A total of 102 progenies were advanced to F5 for further selection and use by the breeders in Delhi. The genetic potential of a few selected enhanced progenies with desired plant types and better yield-related traits is presented in this paper. The study clearly demonstrates the potential of germplasm accessions conserved in genebanks for use in large-scale base-broadening efforts in mungbean.
Mass Propagation and Conservation of Podophyllum emodi Wall, an Endangered Medicinal Plant of the Himalaya
Authors: Kharkwal Amit Chandra , Prakash Om , Bhattacharya Amita , Ahuja Paramvir Singh
Published: March 2006

The technique of excised embryos was employed to facilitate the propagation of Podophyllum emodi derived from seeds collected at the different elevation zones of Himachal Pradesh, India. Seed germination was low, irrespective of stage of seed development or zone of collection. Germination was improved significantly (89.14%) in the partially mature and mature seeds collected from alpine and temperate zones when excised embryos were cultured on basal B5 medium. Leaf emergence and plant establishment in the field was also significantly higher in the plants raised through this technique, despite hypocotyl dormancy. The technique was successfully employed for the production of plants to be reintroduced in large numbers into their habitat in the Great Himalayan National Park.
Characterization of the end-use Quality of Soft Wheat Cultivars from the Eastern and Western US Germplasm ‘Pools’
Authors: Morris Craig F. , Campbell Kim Garland , King Garrison E.
Published: March 2006

Soft wheat (Triticum aestivum L.) improvement could be enhanced by the identification of germplasm with superior end-use quality traits. Due to the geographic and historical separation of eastern and western US soft wheat germplasm ‘pools’, genetic differences in end-use quality may exist among cultivars arising from these two pools. To identify such differences, 30 US soft wheat cultivars were evaluated in ‘head-to-head’ trials over 3 years in Washington state. Cultivars were classified as: eastern soft red winter (SRW), eastern soft white winter (ESWW), western soft white (WSWW) and western Club. These four soft wheat cultivar classifications clearly differed systematically for some of the quality traits examined. The Club wheat cultivar group had the highest flour yield and flour ash. The Club group also had the lowest mixograph dough water absorption. Milling score (which incorporates break flour yield) was highest for Club and ESWW. Eastern soft red and white wheat cultivar groups had lower flour ash and alkaline water retention capacity (AWRC) compared to the western Club and soft white wheats; ESWW had the lowest AWRC of any classification. Cookie diameter was greatest for the ESWW group, followed by the SRW and Club groups (which were not significantly different), and then by the WSWW group. Individual cultivars with exceptional quality traits were also identified. These results indicate that the four US soft wheat germplasm pools differ, and they may be valuable genetic resources for ‘inter-pool’ wheat improvement.
Variation in agronomically important traits in natural populations of wild emmer wheat, Triticum dicoccoides, in Israel
Authors: Beharav Alex , Nevo Eviatar
Published: March 2006

Diversity in agronomically important traits of wild emmer wheat, Triticum dicoccoides, the progenitor of most cultivated wheats, was examined in l60 genotypes representing 16 populations derived from a wide ecogeographical spectrum of climate, soil and water availability in Israel and Turkey. The analysis included 14 quantitative economic characters including heading date, culm length, biomass, grain yield and its components, and grain protein percentage.

The results led to two major conclusions: (i) agronomically important traits varied genetically: ecogeographic diversity in these traits is dramatically displayed when populations are grown in a relatively standardized environment; and (ii) genetic diversity is revealed not only between, but also within populations. Thus, genotypes excelling in some of these characters were found in several populations.
Variation studies in a wild groundnut species, Arachis stenosperma Krapov. & W.C. Gregory nov. sp.
Authors: Singh A. K. , Smartt J. , Singh Rakesh
Published: March 2006

Wild relatives of crop species are known to be sources of genetic diversity that can be used in crop improvement. However, they have not always been studied adequately for the variation that may exist within them, for traits which may have important implications from an evolutionary point of view and their use in breeding programmes. In the present study, a wild groundnut species, Arachis stenosperma, has been studied for variation between accessions collected from different sites in Brazil for morphological and certain nutritional traits, and for disease resistance. Multivariate analysis of 23 characters grouped 18 accessions into two clusters, while one accession, ICG 14927, was distinct from these. However, in protein profile they all appear identical. Hence, the variation appears to have arisen in response to the climatic conditions of their habitat, which has implications for use of these accessions in breeding programmes. The variation in these traits could not be associated with any phytogeographical regions. The dispersal of this species from its centre of origin and diversity to other parts of Brazil appears to be recent and without any identifiable selection pressures having operated.
After the conflict: plant genetic resources of southern Sudan
Authors: Robinson Jonathan
Published: March 2006

Southern Sudan has a low population density, abundant land and tremendous agricultural potential. A large number of domesticated crops are grown in the region in a range of cropping systems. There are also numerous useful wild plant genetic resources. Little collecting work has been done in the region, there are few accessions from southern Sudan stored ex situ and publications on the actual and potential plant genetic resources for agriculture are sparse. The region has been a centre of civil conflict with little respite since independence in 1956. The farmers’ fields and natural environments represent in situ genebanks, which following the cessation of hostilities will become extremely important for the rehabilitation of subsistence agriculture, the promotion of cash crop production and the revitalization of the regional economy. Several wild plant species are highly nutritious and merit the attention of plant scientists. This article describes some of the domesticated, semi-domesticated and wild plant genetic resources of the area, and suggests why these are important for agricultural rehabilitation following implementation of a peace accord.
AFLP characterization and genetic diversity analysis of Indian banana and plantain cultivars (Musa spp.)
Authors: Bhat K. V. , Amaravathi Y. , Gautam P. L. , Velayudhan K. C.
Published: March 2006

DNA profiles of 92 banana and plantain cultivars were generated with 12 amplified fragment length polymorphism (AFLP) primer pairs. The average polymorphism information content (PIC) values of the polymorphic AFLP markers varied from 0.270 to 0.341, and the profiles could distinguish all the 92 cultivars analysed. It was possible to identify differences between two accessions of the AAB genome cultivar Rasthali, indicating the presence of intra-cultivar genetic variation. A UPGMA (unweighted pair group method of arithmetical means) dendrogram generated with 1581 AFLP products identified four major clusters, each comprising cultivars of similar genomic constitution. All the ABB cultivars grouped in a single cluster, which was well separated from the rest. The within-group similarity coefficients indicated that the most diverse group was AAB, followed by AAA. However, significant genetic diversity was also present among AA, AB and ABB Indian banana cultivars, supporting the notion that India, along with other neighbouring south-eastern Asian countries, is the centre of diversity for cultivars of banana and plantain. The presence of substantial diversity among the banana and plantain landrace cultivars could be exploited in varietal improvement programmes.
Transfer of simple sequence repeat (SSR) markers across the legume family for germplasm characterization and evaluation
Authors: Wang M. L. , Gillaspie A. G. , Newman M. L. , Dean R. E. , Pittman R. N. , Morris J. B. , Pederson G. A.
Published: March 2006

A set of 68 simple sequence repeat (SSR) markers were selected from existing databases (including Medicago, soybean, cowpea and peanut) for the purpose of exploiting the transferability of SSRs across species and/or genera within the legume family. Primers were tested for cross-species and cross-genus fragment amplification with an array of 24 different legume accessions. Nearly one-third (30.78%) of the SSR primers screened generated reproducible and cross-genus amplicons. One hundred and seventeen cross-species polymorphic amplicons were identified and could be used as DNA markers. These polymorphic markers are now being used for characterization and evaluation of our collected and donated legume germ- plasm. The transferability of SSRs, mis-/multiple-primings, homologous/heterologous amplifications, single/multiple-amplicons and application of these amplicons as DNA markers are discussed. The transfer of SSR markers across species or across genera can be a very efficient approach for DNA marker development, especially for minor crops.
New Saccharum hybrids in S. spontaneum cytoplasm developed through a combination of conventional and molecular breeding approaches
Authors: Pan Y.-B. , Bumer D. M. , Wei Q. , Cordeiro G. M. , Legendre B. L. , Henry R. J.
Published: March 2006

Identification of sugarcane hybrids is difficult when selections are based solely on morphological traits. Our objective was to combine morphological traits and molecular marker analysis to select F1 hybrids from two separate crosses between Djatiroto, a clone of Saccharum spontaneum, and elite sugarcane clones, LCP 85-384 (Cross 97-3144) and CP 62-258 (Cross 97-3146). The maternal inflorescences of Djatiroto were emasculated by submersion in a circulating 45°C hot-water tank for 10 min to minimize self-fertilization. Cross 97-3144 produced 4.7 g of seeds with 338 viable seeds per gram and Cross 97-3146 produced 2.4 g of seeds with 166 viable seeds per gram. After greenhouse germination, 96 progeny from each cross were evaluated in a field plot. Evaluations were conducted on the ratoon crops for stalk diameter (mm), juice Brix (percentage soluble solids), and a randomly amplified polymorphic DNA (RAPD) marker OPA-11-366 that was reproducibly amplified through PCR from the elite clones, but not the maternal S. spontaneum clone. Fifty progeny (52.1%) from Cross 97-3144 and 36 progeny (37.5%) from Cross 97-3146 inherited the RAPD marker. Five putative F1 progeny were selected from each cross, namely US 99-43, US 99-44, US 99-45, US 99-46 and US 99-47 from Cross 97-3144, and US 99-48, US 99-49, US 99-50, US 99-51 and US 99-52 from Cross 97-3146, based on their relatively larger stalk diameter, higher Brix and inheritance of the RAPD marker. The hybrid nature of these selected progeny was verified with sugarcane microsatellite markers. This is the first report of the development of Saccharum hybrids with the cytoplasm of S. spontaneum for breeding purpose through a combination of conventional and molecular breeding approaches. Availability of these F1 hybrids could enhance the genetic diversity of Saccharum germplasm and has enabled sugarcane geneticists and breeders to explore the possible contribution of S. spontaneum cytoplasm in the development of new sugarcane cultivars.
Variation for antioxidant activity and antioxidants in a subset of AVRDC—the World Vegetable Center Capsicum core collection
Authors: Hanson Peter M. , Yang Ray-yu , Lin Susan , Tsou Samson C. S. , Lee Tung-Ching , Wu Jane , Shieh Jin , Gniffke Paul , Ledesma Dolores
Published: March 2006

Pepper (Capsicum sp.) is important in human diets in many parts of the world and a major source of several antioxidants, including carotenoids, ascorbic acid, tocopherols and phenolics. More information on genetic diversity within Capsicum for antioxidant (AO) content and antioxidant activity (AOA) could contribute to improved human health. We evaluated 46 Capsicum accessions from AVRDC—the World Vegetable Center Capsicum core collection for content of nine AO (five carotenoids, ascorbic acid, tocopherols α and γ, and total phenolics) and two AOA assays for 2 years in south Taiwan. Ample genetic diversity exists within C. annuum to increase AO content. Based on dry weight values, non-pungent C. annuum entries as a group were significantly greater than pungent entries for contents of β-cryptoxanthin (36%), ascorbic acid (65%), total phenolics (36%) and α-tocopherol (11%). Group means of the brown-fruited entries exceeded the means of red-fruited entries for capsanthin (34%), zeaxanthin (37%), lutein (36%), β-cryptoxanthin (71%), β-carotene (82%), ascorbic acid (19%) and α-tocopherol (40%). Red-fruited C. annuum entries ‘Verdano Poblano’ and ‘Guajillo Ancho’ from Mexico ranked among the entries highest for all carotenoids, ascorbic acid and α-tocopherol. The inhibition of lipid peroxidation (ILP) assay could be adopted for AOA characterization or selection because of high variation among entries and consistent entry performance over years. ILP was positively correlated with phenolics (r=0.72**) and ascorbic acid (r=0.58**) contents. Significant positive correlations were detected between most carotenoids as well as a significant positive correlation between ascorbic acid and total phenolics contents (r=0.78**).
Broadening the genetic base of sesame (Sesamum indicum L.) through germplasm enhancement
Authors: Bisht I.S. , Bhat K.V. , Lakhanpaul S. , Biswas B.K. , Pandiyan M. , Hanchinal R.R.
Published: March 2006

Sesame (Sesamum indicum L.) is one of the world's oldest oil crops and has been cultivated in Asia from ancient times. India has a rich diversity of this crop and a landrace collection is maintained at the National Genebank at the National Bureau of Plant Genetic Resources (NBPGR). The breeding potential of this germplasm has been hardly exploited to date. The major hindrance for the utilization of these resources is the transfer of diversity into a form that can be easily used by breeders and farmers. As part of a core collection strategy, a selection was made of 24 of the most diverse and unadapted parental lines, including one accession of the wild species S. mulayanum, and these were intercrossed in various combinations to maximize genetic diversity and to develop locally adapted pools of genetic resources. A weak and decentralized selection regime was maintained at four selected target sites on the progeny of 103 crosses. The range of variation in the selected F4 progenies was assessed, and promising types with desired plant characteristics and high seed yield were selected. Realized genetic gains, especially for yield-related traits, were also assessed. Only a limited fraction of the existing diversity held in the genebank was used in the present study and there is much more diversity available for large-scale genetic enhancement of sesame in the future.
Genetic resources of oilseed Brassica and related species in Gansu Province, China
Authors: Sun Wancang , Pan Qiyuan , Liu Zigang , Meng Yaxiong , Zhang Tao , Wang Heling , Zeng Xiucong
Published: March 2006

Vavilov (1935) described China as the earliest and largest independent centre of origin of cultivated plants. Gansu Province occupies the geographic centre of China. With an area of 454,000 km2, latitudes ranging from 32°3′N to 42°57′N and elevations varying from 500 to 6200 m, the province has an extremely diverse climate and topography. Stretching 1653 km along the ancient Silk Road, Gansu also has a long history of agriculture (6000 years) and for centuries was exposed to dynamic cultural exchanges between the East and the West. The unique combination of these conditions allowed rapeseed to be introduced from Europe and the Middle East, to evolve over a long time of cultivation and to diversify to adapt to many types of ecological conditions and cropping systems in Gansu. Currently, rich genetic resources exist in Gansu for Brassica rapa, B. juncea, B. chinensis and Eruca sativa. Eight landraces are described to demonstrate the diversity of rapeseed genetic resources in Gansu. It is generally recognized that B. chinensis originated in China. Information provided in this paper suggests that Gansu and its adjacent regions could also be a centre of diversity for B. rapa and B. juncea.
Breeding for improved productivity, multiple resistance and wide adaptation in chickpea (Cicer arietinum L.)
Authors: Yadav S. S. , Kumar J. , Turner Neil C. , Berger Jens , Redden Robert , McNeil David , Materne Michael , Knights E. J. , Bahl P. N.
Published: March 2006

Chickpea (Cicer arietinum L.) is an important crop for developed as well as underdeveloped countries, especially those in the Indian sub-continent that contribute more than 60% to both the global area and global production. The harsh environmental conditions under which chickpeas are generally grown impose restrictions on the expression of genetic yield potential. In the present study, a number of different breeding approaches for the development of genotypes possessing multiple resistances to different biotic and abiotic stresses, coupled with enhanced productivity are reported. In one study, 90 genetically diverse genotypes (35 medium-sized desi types, 35 bold-seeded desi types, 10 medium-sized kabuli types and 10 bold-seeded kabuli types) were tested in several locations in the 2000–2002 seasons, under rainfed (dryland) conditions and with supplemental irrigation. The bold-seeded desi genotypes gave superior performance in the rainfed environment, while the bold-seeded kabuli genotypes outyielded the other cultivars under supplemental irrigation. From crosses between accessions from geographically diverse sources, crosses between lines carrying multiple disease resistances, and crosses between the cultivated chickpea and the wild species, C. reticulatum, 23 selections were tested for yield and resistance to multiple stresses at various locations in northern and central India. From the crosses between geographically diverse parents, six high-yielding kabuli genotypes with wide adaptation and drought tolerance were identified. Pyramiding genes for multiple resistances proved useful in identifying eight lines possessing multiple disease resistance. Introgressing wild genes generated nine genotypes with high yield potential, resistance to soil-borne diseases and adaptation to water-limited environments. We conclude that high productivity, multiple resistance and wide adaptability can be achieved simultaneously by using potentially complementary approaches.