bluuebunny/crossref_metadata_2025 huggingface dataset:
Dynamic Network Resource Autonomy Management and Task Scheduling Method
Authors: Li Xiuhong , Yang Jiale , Fan Huilong
Published: March 2023

Satellite network resource management and scheduling technology are significant to constructing integrated information networks in heaven and earth. The difficulty in realizing this technology lies in improving resource utilization efficiency while ensuring the service quality of satellites and efficiently coordinating complex satellite network systems and services. This paper proposes a model, A Dynamic task scheduling method based on a UNified resource Management architecture(DUNM), based on the designed resource management architecture supported by dynamic scheduling algorithms to address the problems of low resource utilization, resource allocation, and task completion rate. First, with sufficient resources, the task execution time to complete a task is calculated based on the number of resources, task transmission time, task waiting time, etc. Secondly, based on the tasks assigned to satellites, the execution time of all functions with different transmission rates of communication links between satellites is calculated, and the total sum of all time consumption is analyzed. Finally, after simulation experiments and comparison with various baseline algorithms, about a 40% reduction in time to complete scheduled tasks and an almost 25% reduction in the average cost to finish a scheduling task, our method has higher scheduling efficiency and lower task completion revenue. It also guarantees a higher task completion rate while completing the tasks. Our approach attained a nearly 100% completion rate for scheduling tasks, which means that our algorithm can achieve the scheduling tasks faster and at high task revenue, thus improving the efficiency and economic efficiency of the whole system. Therefore, it validates the advantages of our method, such as high efficiency and high revenue.
The Use of Gemtuzumab Ozogamicin as Salvage Therapy in Patients with Acute Myeloid Leukemia: A Monocentric Real-World Experience
Authors: Açar İbrahim Halil , Guvenc Birol
Published: March 2023

Background and Objectives: Relapsed or refractory acute myeloid leukemia (r/r AML) is a disease with a poor prognosis. Limited treatment options are available in r/r AML. Here, we administered gemtuzumab ozogamicin (GO) as salvage therapy in twenty-four patients with r/r AML. The aim of the study was to determine the role of GO in r/r AML in real life. Material and Methods: This retrospective observational study recruited 24 adult patients with diagnosed r/r AML from 2018 to 2022. Twenty-four patients with r/r AML were treated with GO. GO treatment was used as monotherapy in 23 patients and in combination with cytarabine in 1 patient. At the time of diagnosis, the risk status of all patients was determined as favorable, intermediate, or adverse according to the 2017 ELN AML guidelines. Results: The median follow-up was 44.3 (13–144) months. Fifteen (62.5%) of the twenty-four patients were in the intermediate-risk cytogenetics group and nine (37.5%) were in the favorable cytogenetics group. The most common adverse events included nausea/vomiting in 79.17% (n = 19) of patients, headache in 62.50% (n = 15), elevated LFTs in 37.50% (n = 9), febrile neutropenia in 25% (n = 6), and bleeding in 25% (n = 6). The most common cause of death was infection. The most common causes of mortality were septic shock, accounting for 33.3% (n = 8) of deaths, and opportunistic lung infection, accounting for 12.5% (n = 3) of deaths. Acute infusion-related toxicities associated with GO were usually transient and, in most cases, responded to the standard of care treatment. After treatment with GO, 16.6% (n = 4) of patients achieved MLFS and 37.5% (n = 9) achieved CR. The overall response rate was 54.1%. The median overall survival time of the patients was 44 months (37.8–50.2 months). Disease-free survival was 22 months (0–48.6 months). The 5-year survival rate was 33%. Conclusions: A low dose of GO improved the overall survival and disease-free survival in r/r AML patients. GO treatment had a positive safety profile in terms of toxicity.
Case Series of Acute Peripheral Neuropathies in Individuals Who Received COVID-19 Vaccination
Authors: Sukockienė Eglė , Breville Gautier , Fayolle Damien , Nencha Umberto , Uginet Marjolaine , Hübers Annemarie
Published: March 2023

Background and Objectives: Vaccination has been critical to managing the COVID-19 pandemic. Autoimmunity of the nervous system, especially among a select set of high-risk groups, can be triggered or enhanced by the contents of vaccines. Here, we report a case series of acute peripheral neuropathies following vaccination against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). We report on 11 patients (range: 30–90 years old) who presented at our center between January 2021 and February 2022. Methods: We obtained the patients’ history and performed clinical neurological examination and electromyoneurography on all subjects. If necessary, magnetic resonance imaging and laboratory testing, including cerebrospinal fluid analysis and specific antibody testing, were performed. Results: Patients presented with peripheral neuropathies of acute onset between 1 and 40 days after vaccination with different types of COVID-19 vaccines. Most cases (9/11) resolved with a rapid, complete or partial recovery. Conclusions: We found acute peripheral neuropathies in a set of individuals after they received vaccines against SARS-CoV-2. Albeit our observation shows that during extensive vaccination programs, negative side effects on the peripheral nervous system might occur, most of them showed benign clinical evolution. Thus, potential side effects should not hinder the prescription of vaccines. More extensive studies are needed to elucidate populations at risk of developing peripheral neuropathies and mechanisms of autoimmune response in the nervous system.
Black Pine (Pinus nigra) Essential Oil as a Green Corrosion Inhibitor for Carbon Steel
Authors: Simović Anđela , Grgur Branimir , Novaković Jelica , Janaćković Peđa , Bajat Jelena
Published: March 2023

In this work, the essential oil of black pine (Pinus nigra J. F. Arnold) was used for the first time as a natural, ecological, and sustainable corrosion inhibitor for the acid cleaning of carbon steel. The essential oil was extracted by hydrodistillation using a Clevenger-type apparatus, and the oil was analyzed by gas chromatography–flame–ionization detection (GC–FID) and gas chromatography–mass spectrometry (GC–MS). The most abundant components in the essential oil were α-pinene, germacrene D, (E)-cariophyllene, and β-pinene. The inhibition efficiency was determined by electrochemical methods (electrochemical impedance spectroscopy and potentiodynamic polarization measurements). The results showed that the inhibitory efficiency of the black pine essential oil increases with time, reaching the highest values after 4 h of immersion for all inhibitor concentrations. It was also shown that black pine essential oil is a mixed-type inhibitor. The contact angle measurements confirmed that the black pine essential oil, as a new natural, environmentally safe inhibitor, is able to protect carbon steel from corrosion in a 1 M HCl solution.
Computational Simulation of a Femoral Nail Fracture
Authors: Whatley Stephen , Hamandi Farah , Venkatarayappa Indresh , Goswami Tarun
Published: March 2023

Femoral nails are used to provide fixation for fractured long bones. These constructs simultaneously provide stability and union in nearly 10% of cases of premature failure. The goal of this investigation was to develop and test different models of the femur using cephalomedullary nail fixation. These models represent three different types of hip fractures (intracapsular, intertrochanteric, and subtrochanteric fractures). By testing the different fracture types, one can determine the fracture tolerance of the constructs from the resulting forces that occur due to the activities of daily living. Understanding the effects that the loads will have on the integrity of the nail-bone construct may help reduce the risks that could arise through its use. The computational simulations performed indicate that an undamaged femur can withstand the forces of 4.4× the body weight of the average adult male. A subtrochanteric femur fracture, however, can only withstand over 2.3× the same weight, nearly 50% lower than the normal femur. Regarding this lower amount, it is not impossible that an overloading scenario could occur. The data from the gait cycle show that, with a subtrochanteric fracture, the nail experiences stress that is just within the fatigue limit of the material. Given the collected data, subtrochanteric fractures are the most likely candidates for causing failures when comparing fracture types. In general, understanding the effects that different loads have on the integrity of the nail-bone construct may help reduce the risks that could arise through its use.
Evolution Behavior of the Surface Oxide Film of Al Alloy Scraps in the Melt
Authors: Huang Chunfa , Liu Zhiguo , Li Jianguo
Published: March 2023

The oxide film on the scrap surface is one of the primary sources of oxide inclusions in the aluminum melt. Understanding the evolution of the oxide films in the aluminum melt is an important step for developing efficient recycling technologies and controlling the quality of the product. In the present study, we studied the evolution behavior of the oxide film in the aluminum melt. The oxide films were introduced via aluminum alloy scraps into the melt, and the micro-morphology and composition of the oxide film were analyzed by scanning electron microscope and energy spectrum. Results show that the oxide film on the surface of 1235 alloy foil, A356 alloy turning, and 5083 alloy scalping were broken into small flake oxide film and then transformed into minor granular oxide when the scraps were charged into commercial purity aluminum melt. However, in aluminum alloy melt containing magnesium, the oxide film remained an intact sheet shape up to a certain melt dwelling time.
Response of the Metastable Pitting Corrosion of Laser Powder Bed Fusion Produced Ti–6Al–4V to H+ Concentration Changes
Authors: Cui Yuwei , Chen Liangyu , Wang Liqiang , Cheng Jun , Zhang Laichang
Published: March 2023

There is limited research on metastable pitting corrosion in an acidic environment, and acid is a major challenge for material corrosion. Therefore, this work investigated the metastable pitting corrosion of laser powder bed fusion (LPBF)-produced Ti–6Al–4V, in Hank’s solution, at different pH values (pH = 3, 5, and 7). This work investigated the effect of acid on the characteristics of passive films, as well as the change in metastable pitting behavior. Based on the results of electrochemical impedance spectroscopy (EIS) and X-ray photoelectron spectroscopy (XPS), the passive film will be inhibited and dissolved under the influence of H+. The higher the concentration of H+, the thinner the passive film. Potentiodynamic polarization tests reveal that LPBFed Ti–6Al–4V in Hank’s solution, at pH 3, has more obvious metastable pitting corrosion. This is because the higher the H+ concentration, the more Cl- is adsorbed on the surface of the passive film, which is prone to generate soluble chlorides by competitive adsorption with oxygen atoms and thus develop into metastable pitting corrosion.
Global and Partial Effect Assessment in Metabolic Syndrome Explored by Metabolomics
Authors: Brandolini-Bunlon Marion , Jaillais Benoit , Cariou Véronique , Comte Blandine , Pujos-Guillot Estelle , Vigneau Evelyne
Published: March 2023

In nutrition and health research, untargeted metabolomics is actually analyzed simultaneously with clinical data to improve prediction and better understand pathological status. This can be modeled using a multiblock supervised model with several input data blocks (metabolomics, clinical data) being potential predictors of the outcome to be explained. Alternatively, this configuration can be represented with a path diagram where the input blocks are each connected by links directed to the outcome—as in multiblock supervised modeling—and are also related to each other, thus allowing one to account for block effects. On the basis of a path model, we show herein how to estimate the effect of an input block, either on its own or conditionally to other(s), on the output response, respectively called “global” and “partial” effects, by percentages of explained variance in dedicated PLS regression models. These effects have been computed in two different path diagrams in a case study relative to metabolic syndrome, involving metabolomics and clinical data from an older men′s cohort (NuAge). From the two effects associated with each path, the results highlighted the complementary information provided by metabolomics to clinical data and, reciprocally, in the metabolic syndrome exploration.
Whole-Genome Sequencing-Based Resistome Analysis of Nosocomial Multidrug-Resistant Non-Fermenting Gram-Negative Pathogens from the Balkans
Authors: Peykov Slavil , Strateva Tanya
Published: March 2023

Non-fermenting Gram-negative bacilli (NFGNB), such as Pseudomonas aeruginosa and Acinetobacter baumannii, are among the major opportunistic pathogens involved in the global antibiotic resistance epidemic. They are designated as urgent/serious threats by the Centers for Disease Control and Prevention and are part of the World Health Organization’s list of critical priority pathogens. Also, Stenotrophomonas maltophilia is increasingly recognized as an emerging cause for healthcare-associated infections in intensive care units, life-threatening diseases in immunocompromised patients, and severe pulmonary infections in cystic fibrosis and COVID-19 individuals. The last annual report of the ECDC showed drastic differences in the proportions of NFGNB with resistance towards key antibiotics in different European Union/European Economic Area countries. The data for the Balkans are of particular concern, indicating more than 80% and 30% of invasive Acinetobacter spp. and P. aeruginosa isolates, respectively, to be carbapenem-resistant. Moreover, multidrug-resistant and extensively drug-resistant S. maltophilia from the region have been recently reported. The current situation in the Balkans includes a migrant crisis and reshaping of the Schengen Area border. This results in collision of diverse human populations subjected to different protocols for antimicrobial stewardship and infection control. The present review article summarizes the findings of whole-genome sequencing-based resistome analyses of nosocomial multidrug-resistant NFGNBs in the Balkan countries.
Combustion Metamorphism in Mud Volcanic Events: A Case Study of the 6 May 2000 Fire Eruption of Karabetova Gora Mud Volcano
Authors: Kokh Svetlana N. , Sokol Ella V.
Published: March 2023

The violent eruption of Karabetova Gora mud volcano on 6 May 2000 (Taman Peninsula, 45°12′16″ N; 36°47′05″ E) triggered gas ignition as a giant straight-flow vertical gas flare. The 400 m high, short-lived (~15 min) gas flare left no thermal halo on the ground surface, but the thermal shock caused melting or annealing of mud masses which became dispersed in ≤2 m3 blocks to distances within 30 m around the volcano conduit. The flare reached the maximum temperatures (~1400–1540 °C) at heights from 75 to 250 m, as estimated by a numerical simulation in SigmaFlow. Bulk melting of dehydrated mud masses was mostly limited to <1.5 cm near the surface of the blocks. Porous paralavas at the site consisted of low- and high-silica K-Al glasses (70%–80%) with residual unmolten grains of detrital quartz and fine (<30 µm) new phases: main intermediate members of the magnetite–ulvöspinel solid solutions and plagioclase (An45-61Ab37-44Or2-11 to An73-90Ab10-27Or0.5-1), minor cordierite (XFe = 26%–46%), pigeonite (XFe = 42%–60%), tridymite, cristobalite, and rare mullite. The metapelitic rocks affected by combustion metamorphism were heterogeneous in terms of phase composition and texture. They failed to attain homogeneity due to the high viscosity of anhydrous silicate melts and brevity of the thermal impact. The revealed features of rocks altered by a giant gas fire may serve as a proxy for phase transformation patterns in highly disequilibrium conditions of a thermal shock, far from the formation conditions of ordinary metamorphic rocks.
Development of an LC-MS/MS Method for Quantification of Sapitinib in Human Liver Microsomes: In Silico and In Vitro Metabolic Stability Evaluation
Authors: Attwa Mohamed W. , AlRabiah Haitham , Mostafa Gamal A. E. , Kadi Adnan A.
Published: March 2023

Sapitinib (AZD8931, SPT) is a tyrosine kinase inhibitor of the epidermal growth factor receptor (EGFR) family (pan-erbB). In multiple tumor cell lines, STP has been shown to be a much more potent inhibitor of EGF-driven cellular proliferation than gefitinib. In the current study, a highly sensitive, rapid, and specific LC-MS/MS analytical method for the estimation of SPT in human liver microsomes (HLMs) was established with application to metabolic stability assessment. The LC-MS/MS analytical method was validated in terms of linearity, selectivity, precision, accuracy, matrix effect, extraction recovery, carryover, and stability following the FDA guidelines for bioanalytical method validation. SPT was detected using electrospray ionization (ESI) as an ionization source under multiple reaction monitoring (MRM) in the positive ion mode. The IS-normalized matrix factor and extraction recovery were acceptable for the bioanalysis of SPT. The SPT calibration curve was linear, from 1 ng/mL to 3000 ng/mL HLM matrix samples, with a linear regression equation of y = 1.7298x + 3.62941 (r2 = 0.9949). The intraday and interday accuracy and precision values of the LC-MS/MS method were −1.45–7.25% and 0.29–6.31%, respectively. SPT and filgotinib (FGT) (internal standard; IS) were separated through the use of an isocratic mobile phase system with a Luna 3 µm PFP(2) column (150 × 4.6 mm) stationary phase column. The limit of quantification (LOQ) was 0.88 ng/mL, confirming the LC-MS/MS method sensitivity. The intrinsic clearance and in vitro half-life of STP were 38.48 mL/min/kg and 21.07 min, respectively. STP exhibited a moderate extraction ratio that revealed good bioavailability. The literature review demonstrated that the current analytical method is the first developed LC-MS/MS method for the quantification of SPT in an HLM matrix with application to SPT metabolic stability evaluation.
The Study of Optimal Adsorption Conditions of Phosphate on Fe-Modified Biochar by Response Surface Methodology
Authors: Qian Jing , Zhou Xiaoyu , Cai Qingsong , Zhao Jinjin , Huang Xianhuai
Published: March 2023

A batch of Fe-modified biochars MS (for soybean straw), MR (for rape straw), and MP (for peanut shell) were prepared by impregnating biochars pyrolyzed from three different raw biomass materials, i.e., peanut shell, soybean straw, and rape straw, with FeCl3 solution in different Fe/C impregnation ratios (0, 0.112, 0.224, 0.448, 0.560, 0.672, and 0.896) in this research. Their characteristics (pH, porosities, surface morphologies, crystal structures, and interfacial chemical behaviors) and phosphate adsorption capacities and mechanisms were evaluated. The optimization of their phosphate removal efficiency (Y%) was analyzed using the response surface method. Our results indicated that MR, MP, and MS showed their best phosphate adsorption capacity at Fe/C ratios of 0.672, 0.672, and 0.560, respectively. Rapid phosphate removal was observed within the first few minutes and the equilibrium was attained by 12 h in all treatment. The optimal conditions for phosphorus removal were pH = 7.0, initial phosphate concentration = 132.64 mg L−1, and ambient temperature = 25 °C, where the Y% values were 97.76, 90.23, and 86.23% of MS, MP, and MR, respectively. Among the three biochars, the maximum phosphate removal efficiency determined was 97.80%. The phosphate adsorption process of three modified biochars followed a pseudo-second-order adsorption kinetic model, indicating monolayer adsorption based on electrostatic adsorption or ion exchange. Thus, this study clarified the mechanism of phosphate adsorption by three Fe-modified biochar composites, which present as low-cost soil conditioners for rapid and sustainable phosphate removal.
Phosphorus-Containing Polymers as Sensitive Biocompatible Probes for 31P Magnetic Resonance
Authors: Kracíková Lucie , Androvič Ladislav , Potočková Iveta , Ziółkowska Natalia , Vít Martin , Červený David , Jirák Daniel , Laga Richard
Published: March 2023

The visualization of organs and tissues using 31P magnetic resonance (MR) imaging represents an immense challenge. This is largely due to the lack of sensitive biocompatible probes required to deliver a high-intensity MR signal that can be distinguished from the natural biological background. Synthetic water-soluble phosphorus-containing polymers appear to be suitable materials for this purpose due to their adjustable chain architecture, low toxicity, and favorable pharmacokinetics. In this work, we carried out a controlled synthesis, and compared the MR properties, of several probes consisting of highly hydrophilic phosphopolymers differing in composition, structure, and molecular weight. Based on our phantom experiments, all probes with a molecular weight of ~3–400 kg·mol−1, including linear polymers based on poly(2-methacryloyloxyethyl phosphorylcholine) (PMPC), poly(ethyl ethylenephosphate) (PEEP), and poly[bis(2-(2-(2-methoxyethoxy)ethoxy)ethoxy)]phosphazene (PMEEEP) as well as star-shaped copolymers composed of PMPC arms grafted onto poly(amidoamine) dendrimer (PAMAM-g-PMPC) or cyclotriphosphazene-derived cores (CTP-g-PMPC), were readily detected using a 4.7 T MR scanner. The highest signal-to-noise ratio was achieved by the linear polymers PMPC (210) and PMEEEP (62) followed by the star polymers CTP-g-PMPC (56) and PAMAM-g-PMPC (44). The 31P T1 and T2 relaxation times for these phosphopolymers were also favorable, ranging between 1078 and 2368 and 30 and 171 ms, respectively. We contend that select phosphopolymers are suitable for use as sensitive 31P MR probes for biomedical applications.
Mechanistic DFT Study of 1,3-Dipolar Cycloadditions of Azides with Guanidine
Authors: Antol Ivana , Glasovac Zoran , Margetić Davor
Published: March 2023

Density functional calculations SMD(chloroform)//B3LYP/6-311+G(2d,p) were employed in the computational study of 1,3-dipolar cycloadditions of azides with guanidine. The formation of two regioisomeric tetrazoles and their rearrangement to cyclic aziridines and open-chain guanidine products were modeled. The results suggest the feasibility of an uncatalyzed reaction under very drastic conditions since the thermodynamically preferred reaction path (a), which involves cycloaddition by binding the carbon atom from guanidine to the terminal azide nitrogen atom, and the guanidine imino nitrogen with the inner N atom from the azide, has an energy barrier higher than 50 kcal mol−1. The formation of the other regioisomeric tetrazole (imino nitrogen interacts with terminal N atom of azide) in direction (b) can be more favorable and proceed under milder conditions if alternative activation of the nitrogen molecule releases (e.g., photochemical activation), or deamination could be achieved because these processes have the highest barrier in the less favorable (b) branch of the mechanism. The introduction of substituents should favorably affect the cycloaddition reactivity of the azides, with the greatest effects expected for the benzyl and perfluorophenyl groups.
Ketamine Evolving Clinical Roles and Potential Effects with Cognitive, Motor and Driving Ability
Authors: Edinoff Amber N. , Sall Saveen , Koontz Colby B. , Williams Ajah K. , Drumgo DeMarcus , Mouhaffel Aya , Cornett Elyse M. , Murnane Kevin S. , Kaye Alan D.
Published: March 2023

While driving under the influence of drugs, drivers are more likely to be involved in and cause more accidents than drivers who do not drive under the influence. Ketamine is derived from phencyclidine and acts as a noncompetitive antagonist and allosteric modulator of N-methyl-D-aspartate receptors. Ketamine has been used to treat a variety of psychiatric disorders, with the most notable being treatment-resistant depression. With the rise of at-home ketamine treatment companies, the safety of unsupervised administration remains under evaluation. A study with ketamine and a ketamine-like medication, rapasitnel, showed that those who were given ketamine experienced more sleepiness and had decreased self-reported motivation and confidence in their driving abilities. Moreover, there seem to be significant differences in the acute versus persistent effects of ketamine, as well as the anesthetic versus subanesthetic doses, both in terms of effects and outcomes. These divergent effects complicate the clinical uses of ketamine, specifically involving driving, drowsiness, and cognitive abilities. This review aims to describe not only the various clinical uses of ketamine but also the potentially detrimental effects of driving under the influence, which should be understood to help with counseling the patients who use these substances, both for their well-being and to protect public safety.
Mediterranean Dietary Pattern Adjusted for CKD Patients: The MedRen Diet
Authors: D’Alessandro Claudia , Giannese Domenico , Panichi Vincenzo , Cupisti Adamasco
Published: March 2023

A number of studies in the general population showed that healthy dietary patterns, such as the Mediterranean Diet, can improve or prevent the development of several chronic diseases and are associated with a significant reduction in all-cause and cardiovascular mortality. The Mediterranean diet may also have favorable effects for the prevention of chronic kidney disease (CKD), but no evidence of renoprotection exists in CKD patients. The Mediterranean Renal (MedRen) diet is an adaptation of the Mediterranean diet recommendations comprising a quantitative reduction in the RDA values of protein, salt and phosphate intake for the general population. Hence, MedRen supplies 0.8 g/Kg of protein, 6 g of salt and less than 800 mg of phosphate daily. Obviously, there is a preference for products of plant origin, which contain more alkali, fibers, unsaturated fatty acids than animal-based food. The MedRen diet can be implemented easily in mild-to-moderate stages of CKD with good results, both in terms of adherence to prescriptions and metabolic compensation. In our opinion, it should be the first step of CKD stage 3 nutritional management. This paper describes the features and reports our experience in the implementation of the MedRen diet as an early nutritional approach to CKD.
Potential of Polyphenols for Improving Sleep: A Preliminary Results from Review of Human Clinical Trials and Mechanistic Insights
Authors: Hibi Masanobu
Published: March 2023

Global epidemiologic evidence supports an interrelationship between sleep disorders and fruits and vegetable ingestion. Polyphenols, a broad group of plant substances, are associated with several biologic processes, including oxidative stress and signaling pathways that regulate the expression of genes promoting an anti-inflammatory environment. Understanding whether and how polyphenol intake is related to sleep may provide avenues to improve sleep and contribute to delaying or preventing the development of chronic disease. This review aims to assess the public health implications of the association between polyphenol intake and sleep and to inform future research. The effects of polyphenol intake, including chlorogenic acid, resveratrol, rosmarinic acid, and catechins, on sleep quality and quantity are discussed to identify polyphenol molecules that may improve sleep. Although some animal studies have investigated the mechanisms underlying the effects of polyphenols on sleep, the paucity of trials, especially randomized controlled trials, does not allow for conducting a meta-analysis to reach clear conclusions about the relationships among these studies to support the sleep-improving effects of polyphenols.
Dietary-Derived Exosome-like Nanoparticles as Bacterial Modulators: Beyond MicroRNAs
Authors: Manzaneque-López Mari Cruz , Sánchez-López Christian M. , Pérez-Bermúdez Pedro , Soler Carla , Marcilla Antonio
Published: March 2023

There is increasing evidence that food is an important factor that influences the composition of the gut microbiota. Usually, all the attention has been focused on nutrients such as lipids, proteins, vitamins, or polyphenols. However, a pivotal role in these processes has been linked to dietary-derived exosome-like nanoparticles (DELNs). While food macro- and micronutrient composition are largely well established, there is considerable interest in these DELNs and their cargoes. In this sense, traditionally, all the attention was focused on the proteins or miRNAs contained in these vesicles. However, it has been shown that DELNs would also carry other bioactive molecules with a key role in regulating biochemical pathways and/or interactions with the host’s gut microbiome affecting intracellular communication. Due to the scarce literature, it is necessary to compile the current knowledge about the antimicrobial capacity of DELNs and its possible molecular mechanisms that will serve as a starting point. For this reason, in this review, we highlight the impact of DENLs on different bacteria species modulating the host gut microbiota or antibacterial properties. It could be concluded that DELNs, isolated from both plant and animal foods, exert gut microbiota modulation. However, the presence of miRNA in the vesicle cargoes is not the only one responsible for this effect. Lipids present in the DELNs membrane or small molecules packed in may also be responsible for apoptosis signaling, inhibition, or growth promoters.
Composite PLGA–Nanobioceramic Coating on Moxifloxacin-Loaded Akermanite 3D Porous Scaffolds for Bone Tissue Regeneration
Authors: Pouroutzidou Georgia K. , Papadopoulou Lambrini , Lazaridou Maria , Tsachouridis Konstantinos , Papoulia Chrysanthi , Patsiaoura Dimitra , Tsamesidis Ioannis , Chrissafis Konstantinos , Vourlias George , Paraskevopoulos Konstantinos M. , Anastasiou Antonios D. , Bikiaris Dimitrios N. , Kontonasaki Eleana
Published: March 2023

Silica-based ceramics doped with calcium and magnesium have been proposed as suitable materials for scaffold fabrication. Akermanite (Ca2MgSi2O7) has attracted interest for bone regeneration due to its controllable biodegradation rate, improved mechanical properties, and high apatite-forming ability. Despite the profound advantages, ceramic scaffolds provide weak fracture resistance. The use of synthetic biopolymers such as poly(lactic-co-glycolic acid) (PLGA) as coating materials improves the mechanical performance of ceramic scaffolds and tailors their degradation rate. Moxifloxacin (MOX) is an antibiotic with antimicrobial activity against numerous aerobic and anaerobic bacteria. In this study, silica-based nanoparticles (NPs) enriched with calcium and magnesium, as well as copper and strontium ions that induce angiogenesis and osteogenesis, respectively, were incorporated into the PLGA coating. The aim was to produce composite akermanite/PLGA/NPs/MOX-loaded scaffolds through the foam replica technique combined with the sol–gel method to improve the overall effectiveness towards bone regeneration. The structural and physicochemical characterizations were evaluated. Their mechanical properties, apatite forming ability, degradation, pharmacokinetics, and hemocompatibility were also investigated. The addition of NPs improved the compressive strength, hemocompatibility, and in vitro degradation of the composite scaffolds, resulting in them keeping a 3D porous structure and a more prolonged release profile of MOX that makes them promising for bone regeneration applications.
Adding New Scientific Evidences on the Pharmaceutical Properties of Pelargonium quercetorum Agnew Extracts by Using In Vitro and In Silico Approaches
Authors: Chiavaroli Annalisa , Libero Maria Loreta , Di Simone Simonetta Cristina , Acquaviva Alessandra , Nilofar  , Recinella Lucia , Leone Sheila , Brunetti Luigi , Cicia Donatella , Izzo Angelo Antonio , Orlando Giustino , Zengin Gokhan , Uba Abdullahi Ibrahim , Cakilcioğlu Ugur , Mukemre Muzaffer , Elkiran Omer , Menghini Luigi , Ferrante Claudio
Published: March 2023

Pelargonium quercetorum is a medicinal plant traditionally used for treating intestinal worms. In the present study, the chemical composition and bio-pharmacological properties of P. quercetorum extracts were investigated. Enzyme inhibition and scavenging/reducing properties of water, methanol, and ethyl acetate extracts were assayed. The extracts were also studied in an ex vivo experimental model of colon inflammation, and in this context the gene expression of cyclooxygenase-2 (COX-2) and tumor necrosis factor α (TNFα) were assayed. Additionally, in colon cancer HCT116 cells, the gene expression of transient receptor potential cation channel subfamily M (melastatin) member 8 (TRPM8), possibly involved in colon carcinogenesis, was conducted as well. The extracts showed a different qualitative and quantitative content of phytochemicals, with water and methanol extracts being richer in total phenols and flavonoids, among which are flavonol glycosides and hydroxycinnamic acids. This could explain, at least in part, the higher antioxidant effects shown by methanol and water extracts, compared with ethyl acetate extract. By contrast, the ethyl acetate was more effective as cytotoxic agent against colon cancer cells, and this could be related, albeit partially, to the content of thymol and to its putative ability to downregulate TRPM8 gene expression. Additionally, the ethyl acetate extract was effective in inhibiting the gene expression of COX-2 and TNFα in isolated colon tissue exposed to LPS. Overall, the present results support future studies for investigating protective effects against gut inflammatory diseases.
Response of Juvenile Saccharina japonica to the Combined Stressors of Elevated pCO2 and Excess Copper
Authors: Zhang Wenze , He Lianghua , Pan Jiangqi , Zhou Yuhong , Ge Ruxiang , Li Sufang , Shi Yunyun , Chen Xinhua , Chu Yaoyao
Published: March 2023

Coastal macroalgae may be subjected to global and local environmental stressors, such as ocean acidification and heavy-metal pollution. We investigated the growth, photosynthetic characteristics, and biochemical compositions of juvenile sporophytes of Saccharina japonica cultivated at two pCO2 levels (400 and 1000 ppmv) and four copper concentrations (natural seawater, control; 0.2 μM, low level; 0.5 μM, medium level; and 1 μM, high level) to better understand how macroalgae respond to ongoing environmental changes. The results showed that the responses of juvenile S. japonica to copper concentrations depended on the pCO2 level. Under the 400 ppmv condition, medium and high copper concentrations significantly decreased the relative growth rate (RGR) and non-photochemical quenching (NPQ) but increased the relative electron transfer rate (rETR) and chlorophyll a (Chl a), chlorophyll c (Chl c), carotenoid (Car), and soluble carbohydrate contents. At 1000 ppmv, however, none of the parameters had significant differences between the different copper concentrations. Our data suggest that excess copper may inhibit the growth of juvenile sporophytes of S. japonica, but this negative effect could be alleviated by CO2-induced ocean acidification.
Important Medicinal and Food Taxa (Orders and Families) in Kenya, Based on Three Quantitative Approaches
Authors: Mutie Fredrick Munyao , Mbuni Yuvenalis Morara , Rono Peninah Cheptoo , Mkala Elijah Mbandi , Nzei John Mulinge , Phumthum Methee , Hu Guang-Wan , Wang Qing-Feng
Published: March 2023

Globally, food and medicinal plants have been documented, but their use patterns are poorly understood. Useful plants are non-random subsets of flora, prioritizing certain taxa. This study evaluates orders and families prioritized for medicine and food in Kenya, using three statistical models: Regression, Binomial, and Bayesian approaches. An extensive literature search was conducted to gather information on indigenous flora, medicinal and food plants. Regression residuals, obtained using LlNEST linear regression function, were used to quantify if taxa had unexpectedly high number of useful species relative to the overall proportion in the flora. Bayesian analysis, performed using BETA.INV function, was used to obtain superior and inferior 95% probability credible intervals for the whole flora and for all taxa. To test for the significance of individual taxa departure from the expected number, binomial analysis using BINOMDIST function was performed to obtain p-values for all taxa. The three models identified 14 positive outlier medicinal orders, all with significant values (p < 0.05). Fabales had the highest (66.16) regression residuals, while Sapindales had the highest (1.1605) R-value. Thirty-eight positive outlier medicinal families were identified; 34 were significant outliers (p < 0.05). Rutaceae (1.6808) had the highest R-value, while Fabaceae had the highest regression residuals (63.2). Sixteen positive outlier food orders were recovered; 13 were significant outliers (p < 0.05). Gentianales (45.27) had the highest regression residuals, while Sapindales (2.3654) had the highest R-value. Forty-two positive outlier food families were recovered by the three models; 30 were significant outliers (p < 0.05). Anacardiaceae (5.163) had the highest R-value, while Fabaceae had the highest (28.72) regression residuals. This study presents important medicinal and food taxa in Kenya, and adds useful data for global comparisons.
Hyptis obtusiflora C. Presl ex Benth Methanolic Extract Exhibits Anti-Inflammatory and Anti-Gastritis Activities via Suppressing AKT/NF-κB Pathway
Authors: Oh Jieun , Cho Jae Youl , Kim Daewon
Published: March 2023

Inflammation is an indispensable part of the human body’s self-defense mechanism against external stimuli. The interactions between Toll-like receptors and microbial components trigger the innate immune system via NF-κB signaling, which regulates the overall cell signaling including inflammatory responses and immune modulations. The anti-inflammatory effects of Hyptis obtusiflora C. Presl ex Benth, which has been used as a home remedy for gastrointestinal disorders and skin disease in rural areas of Latin America, have not yet been studied. Here, we investigate the medicinal properties of Hyptis obtusiflora C. Presl ex Benth methanol extract (Ho-ME) for inflammatory response suppression. Nitric oxide secretion in RAW264.7 cells triggered by TLR2, 3, or 4 agonists was reduced by Ho-ME. Reduction of inducible nitric oxide synthase (iNOS), cyclooxygenase (COX)-2, and interleukin (IL)-1b mRNA expression was observed. Decreased transcriptional activity in TRIF- and MyD88-overexpressing HEK293T cells was detected with a luciferase assay. Additionally, serially downregulated phosphorylation of kinase in the NF-κB pathway by Ho-ME was discovered in lipopolysaccharide-treated RAW264.7 cells. Together with the overexpression of its constructs, AKT was identified as a target protein of Ho-ME, and its binding domains were reaffirmed. Moreover, Ho-ME exerted gastroprotective effects in an acute gastritis mouse model generated by the administration of HCl and EtOH. In conclusion, Ho-ME downregulates inflammation via AKT targeting in the NF-κB pathway, and the combined results support Hyptis obtusiflora as a new candidate anti-inflammatory drug.
Gene Functional Networks from Time Expression Profiles: A Constructive Approach Demonstrated in Chili Pepper (Capsicum annuum L.)
Authors: Flores-Díaz Alan , Escoto-Sandoval Christian , Cervantes-Hernández Felipe , Ordaz-Ortiz José J. , Hayano-Kanashiro Corina , Reyes-Valdés Humberto , Garcés-Claver Ana , Ochoa-Alejo Neftalí , Martínez Octavio
Published: March 2023

Gene co-expression networks are powerful tools to understand functional interactions between genes. However, large co-expression networks are difficult to interpret and do not guarantee that the relations found will be true for different genotypes. Statistically verified time expression profiles give information about significant changes in expressions through time, and genes with highly correlated time expression profiles, which are annotated in the same biological process, are likely to be functionally connected. A method to obtain robust networks of functionally related genes will be useful to understand the complexity of the transcriptome, leading to biologically relevant insights. We present an algorithm to construct gene functional networks for genes annotated in a given biological process or other aspects of interest. We assume that there are genome-wide time expression profiles for a set of representative genotypes of the species of interest. The method is based on the correlation of time expression profiles, bound by a set of thresholds that assure both, a given false discovery rate, and the discard of correlation outliers. The novelty of the method consists in that a gene expression relation must be repeatedly found in a given set of independent genotypes to be considered valid. This automatically discards relations particular to specific genotypes, assuring a network robustness, which can be set a priori. Additionally, we present an algorithm to find transcription factors candidates for regulating hub genes within a network. The algorithms are demonstrated with data from a large experiment studying gene expression during the development of the fruit in a diverse set of chili pepper genotypes. The algorithm is implemented and demonstrated in a new version of the publicly available R package “Salsa” (version 1.0).
Soil Fertility Improvement with Mixtures of Wood Ash and Biogas Digestates Enhances Leaf Photosynthesis and Extends the Growth Period for Deciduous Trees
Authors: Zuševica Austra , Adamovičs Aleksandrs , Dūmiņš Kārlis , Vendiņa Viktorija , Žīgure Sindija , Lazdina Dagnija
Published: March 2023

In the context of climate change, it is necessary to establish forest management by balancing more products, using less area, and minimizing environmental impacts. The use of different industrial bio-based by-products as soil conditioners in the last few decades has gain more interest, because it leads to an extended use time of these products and supports the circular economy. The aim of this study was to determine the effect of fertiliser made from cattle and pig manure biogas fermentation digestate and wood ash from two cogeneration plants, applied in different mixture ratios, to test its suitability for fertilisation of deciduous trees, using the physiological, morphological, and chemical parameters of the leaves as an indicator. We selected two poplar clones: foreign ‘OP42’ (syn. Hybrid 275) and local ‘AUCE’ annual shoot stem cuttings as planting materials. A negative control group with acidic forest mineral soil as substrate and four fertilised groups with different applied digestate and wood ash ratio mixtures to forest soil was established (ash:digestate 0:0 (Control), 1:1, 2:1, 3:1, 4:1). Mixture application improved growing conditions because all fertilised group poplars had longer growth periods and photosynthetic rates in August than the control group. Both local and foreign clones showed a good response to fertilisation in terms of leaf parameters. Poplar is a suitable culture to fertilise with bio-waste biogenic products, because of its capacity to absorb nutrients and fast response to fertilisation.
Detecting Cotton Leaf Curl Virus Resistance Quantitative Trait Loci in Gossypium hirsutum and iCottonQTL a New R/Shiny App to Streamline Genetic Mapping
Authors: Schoonmaker Ashley N. , Hulse-Kemp Amanda M. , Youngblood Ramey C. , Rahmat Zainab , Atif Iqbal Muhammad , Rahman Mehboob-ur , Kochan Kelli J. , Scheffler Brian E. , Scheffler Jodi A.
Published: March 2023

Cotton leaf curl virus (CLCuV) causes devastating losses to fiber production in Central Asia. Viral spread across Asia in the last decade is causing concern that the virus will spread further before resistant varieties can be bred. Current development depends on screening each generation under disease pressure in a country where the disease is endemic. We utilized quantitative trait loci (QTL) mapping in four crosses with different sources of resistance to identify single nucleotide polymorphism (SNP) markers associated with the resistance trait to allow development of varieties without the need for field screening every generation. To assist in the analysis of multiple populations, a new publicly available R/Shiny App was developed to streamline genetic mapping using SNP arrays and to also provide an easy method to convert and deposit genetic data into the CottonGen database. Results identified several QTL from each cross, indicating possible multiple modes of resistance. Multiple sources of resistance would provide several genetic routes to combat the virus as it evolves over time. Kompetitive allele specific PCR (KASP) markers were developed and validated for a subset of QTL, which can be used in further development of CLCuV-resistant cotton lines.
Interactions of Polyamines and Phytohormones in Plant Response to Abiotic Stress
Authors: Napieraj Natalia , Janicka Małgorzata , Reda Małgorzata
Published: March 2023

Numerous environmental conditions negatively affect plant production. Abiotic stresses, such as salinity, drought, temperature, and heavy metals, cause damage at the physiological, biochemical, and molecular level, and limit plant growth, development, and survival. Studies have indicated that small amine compounds, polyamines (PAs), play a key role in plant tolerance to various abiotic stresses. Pharmacological and molecular studies, as well as research using genetic and transgenic approaches, have revealed the favorable effects of PAs on growth, ion homeostasis, water maintenance, photosynthesis, reactive oxygen species (ROS) accumulation, and antioxidant systems in many plant species under abiotic stress. PAs display a multitrack action: regulating the expression of stress response genes and the activity of ion channels; improving the stability of membranes, DNA, and other biomolecules; and interacting with signaling molecules and plant hormones. In recent years the number of reports indicating crosstalk between PAs and phytohormones in plant response to abiotic stresses has increased. Interestingly, some plant hormones, previously known as plant growth regulators, can also participate in plant response to abiotic stresses. Therefore, the main goal of this review is to summarize the most significant results that represent the interactions between PAs and plant hormones, such as abscisic acid, brassinosteroids, ethylene, jasmonates, and gibberellins, in plants under abiotic stress. The future perspectives for research focusing on the crosstalk between PAs and plant hormones were also discussed.