bluuebunny/crossref_metadata_2025 huggingface dataset:
Apochromatic X-ray focusing
Authors: Sanli Umut T. , Rodgers Griffin , Zdora Marie-Christine , Qi Peng , Garrevoet Jan , Falch Ken Vidar , Müller Bert , David Christian , Vila-Comamala Joan
Published: May 2023

Achromatic doublets are combinations of two individual lenses designed to focus different wavelengths of light in the same position. Apochromatic optics are improved versions of the achromatic schemes which extend the wavelength range significantly. Both achromatic and apochromatic optics are well-established for visible light. However, X-ray achromatic lenses did not exist until very recently, and X-ray apochromatic lenses have never been experimentally demonstrated. Here, we create an X-ray apochromatic lens system using an appropriate combination of a Fresnel zone plate and a diverging compound refractive lens with a tuned separation distance. The energy-dependent performance of this apochromat was characterized at photon energies between 6.5 and 13.0 keV by ptychographic reconstruction of the focal spot and scanning transmission X-ray microscopy of a resolution test sample. The apochromat delivered a reconstructed focal spot size of 940 × 740 nm2. The apochromatic combination shows a four-fold improvement in the chromatic aberration correction range compared to an achromatic doublet configuration. Thus, apochromatic X-ray optics have the potential to increase the focal spot intensity for a wide variety of X-ray applications.
Comparing T- and B-cell responses to COVID-19 vaccines across varied immune backgrounds
Authors: Cui Zhen , Luo Wenxin , Chen Ruihong , Li Yalun , Wang Zhoufeng , Liu Yong , Liu Shuo , Feng LeiLei , Jia Zijing , Cheng Ruixin , Tang Jun , Huang Weijin , Zhang Yanjun , Liu Huawen , Wang Xiangxi , Li Weimin
Published: May 2023

The emergence of adapted variants of the SARS-CoV-2 virus has led to a surge in breakthrough infections worldwide. A recent analysis of immune responses in people who received inactivated vaccines has revealed that individuals with no prior infection have limited resistance to Omicron and its sub-lineages, while those with previous infections exhibit a significant amount of neutralizing antibodies and memory B cells. However, specific T-cell responses remain largely unaffected by the mutations, indicating that T-cell-mediated cellular immunity can still provide protection. Moreover, the administration of a third dose of vaccine has resulted in a marked increase in the spectrum and duration of neutralizing antibodies and memory B cells in vivo, which has enhanced resistance to emerging variants such as BA.2.75 and BA.2.12.1. These results highlight the need to consider booster immunization for previously infected individuals and the development of novel vaccination strategies. The rapid spread of adapted variants of the SARS-CoV-2 virus presents a significant challenge to global health. The findings from this study underscore the importance of tailoring vaccination strategies based on individual immune backgrounds and the potential need for booster shots to combat emerging variants. Continued research and development are crucial to discovering new immunization strategies that will effectively protect public health against the evolving virus.
Depression and 24 gastrointestinal diseases: a Mendelian randomization study
Authors: Ruan Xixian , Chen Jie , Sun Yuhao , Zhang Yao , Zhao Jianhui , Wang Xiaoyan , Li Xue , Yuan Shuai , Larsson Susanna C.
Published: May 2023

The causality of the association between depression and gastrointestinal diseases is undetermined. We conducted Mendelian randomization (MR) analyses to systematically explore the associations of depression with 24 gastrointestinal diseases. Independent genetic variants associated with depression at the genome-wide significance level were selected as instrumental variables. Genetic associations with 24 gastrointestinal diseases were obtained from the UK Biobank study, the FinnGen study, and large consortia. Multivariable MR analysis was conducted to explore the mediation effects of body mass index, cigarette smoking, and type 2 diabetes. After multiple-testing corrections, genetic liability to depression was associated with an increased risk of irritable bowel syndrome, non-alcohol fatty liver disease, alcoholic liver disease, gastroesophageal reflux, chronic pancreatitis, duodenal ulcer, chronic gastritis, gastric ulcer, diverticular disease, cholelithiasis, acute pancreatitis, and ulcerative colitis. For the causal effect of genetic liability to depression on non-alcoholic fatty liver disease, a substantial proportion was mediated by body mass index. Genetic predisposition to smoking initiation mediated half of effect of depression on acute pancreatitis. This MR study suggests that depression may play a causal role in many gastrointestinal diseases.
Chemistry-intuitive explanation of graph neural networks for molecular property prediction with substructure masking
Authors: Wu Zhenxing , Wang Jike , Du Hongyan , Jiang Dejun , Kang Yu , Li Dan , Pan Peichen , Deng Yafeng , Cao Dongsheng , Hsieh Chang-Yu , Hou Tingjun
Published: May 2023

Graph neural networks (GNNs) have been widely used in molecular property prediction, but explaining their black-box predictions is still a challenge. Most existing explanation methods for GNNs in chemistry focus on attributing model predictions to individual nodes, edges or fragments that are not necessarily derived from a chemically meaningful segmentation of molecules. To address this challenge, we propose a method named substructure mask explanation (SME). SME is based on well-established molecular segmentation methods and provides an interpretation that aligns with the understanding of chemists. We apply SME to elucidate how GNNs learn to predict aqueous solubility, genotoxicity, cardiotoxicity and blood–brain barrier permeation for small molecules. SME provides interpretation that is consistent with the understanding of chemists, alerts them to unreliable performance, and guides them in structural optimization for target properties. Hence, we believe that SME empowers chemists to confidently mine structure-activity relationship (SAR) from reliable GNNs through a transparent inspection on how GNNs pick up useful signals when learning from data.
Strong, tough, rapid-recovery, and fatigue-resistant hydrogels made of picot peptide fibres
Authors: Xue Bin , Bashir Zoobia , Guo Yachong , Yu Wenting , Sun Wenxu , Li Yiran , Zhang Yiyang , Qin Meng , Wang Wei , Cao Yi
Published: May 2023

Hydrogels are promising soft materials as tissue engineering scaffolds, stretchable sensors, and soft robotics. Yet, it remains challenging to develop synthetic hydrogels with mechanical stability and durability similar to those of the connective tissues. Many of the necessary mechanical properties, such as high strength, high toughness, rapid recovery, and high fatigue resistance, generally cannot be established together using conventional polymer networks. Here we present a type of hydrogels comprising hierarchical structures of picot fibres made of copper-bound self-assembling peptide strands with zipped flexible hidden length. The redundant hidden lengths allow the fibres to be extended to dissipate mechanical load without reducing network connectivity, making the hydrogels robust against damage. The hydrogels possess high strength, good toughness, high fatigue threshold, and rapid recovery, comparable to or even outperforming those of articular cartilage. Our study highlights the unique possibility of tailoring hydrogel network structures at the molecular level to improve their mechanical performance.
Male reproductive traits are differentially affected by dietary macronutrient balance but unrelated to adiposity
Authors: Crean A. J. , Afrin S. , Niranjan H. , Pulpitel T. J. , Ahmad G. , Senior A. M. , Freire T. , Mackay F. , Nobrega M. A. , Barrès R. , Simpson S. J. , Pini T.
Published: May 2023

Dietary factors influence male reproductive function in both experimental and epidemiological studies. However, there are currently no specific dietary guidelines for male preconception health. Here, we use the Nutritional Geometry framework to examine the effects of dietary macronutrient balance on reproductive traits in C57BL/6 J male mice. Dietary effects are observed in a range of morphological, testicular and spermatozoa traits, although the relative influence of protein, fat, carbohydrate, and their interactions differ depending on the trait being examined. Interestingly, dietary fat has a positive influence on sperm motility and antioxidant capacity, differing to typical high fat diet studies where calorie content is not controlled for. Moreover, body adiposity is not significantly correlated with any of the reproductive traits measured in this study. These results demonstrate the importance of macronutrient balance and calorie intake on reproductive function and support the need to develop specific, targeted, preconception dietary guidelines for males.
Silicon heterojunction solar cells with up to 26.81% efficiency achieved by electrically optimized nanocrystalline-silicon hole contact layers
Authors: Lin Hao , Yang Miao , Ru Xiaoning , Wang Genshun , Yin Shi , Peng Fuguo , Hong Chengjian , Qu Minghao , Lu Junxiong , Fang Liang , Han Can , Procel Paul , Isabella Olindo , Gao Pingqi , Li Zhenguo , Xu Xixiang
Published: May 2023

Silicon heterojunction (SHJ) solar cells have reached high power conversion efficiency owing to their effective passivating contact structures. Improvements in the optoelectronic properties of these contacts can enable higher device efficiency, thus further consolidating the commercial potential of SHJ technology. Here we increase the efficiency of back junction SHJ solar cells with improved back contacts consisting of p-type doped nanocrystalline silicon and a transparent conductive oxide with a low sheet resistance. The electrical properties of the hole-selective contact are analysed and compared with a p-type doped amorphous silicon contact. We demonstrate improvement in the charge carrier transport and a low contact resistivity (<5 mΩ cm2). Eventually, we report a series of certified power conversion efficiencies of up to 26.81% and fill factors up to 86.59% on industry-grade silicon wafers (274 cm2, M6 size).
Two-component molecular motor driven by a GTPase cycle
Authors: Singh Anupam , Soler Joan Antoni , Lauer Janelle , Grill Stephan W. , Jahnel Marcus , Zerial Marino , Thutupalli Shashi
Published: May 2023

ATPases are a group of enzymes that can cyclically convert the free energy of ATP hydrolysis into mechanical work. GTPases are another class of enzymes that are predominantly associated with signal transduction processes, but their role in mechanotransduction is less established. It was previously shown that the binding of the GTPase Rab5 to the tethering protein EEA1 induces a large conformational change in EEA1 from a rigid, extended to a flexible, collapsed state. This entropic collapse of EEA1 gives rise to an effective force that can pull tethered membranes closer. It currently remains unclear if EEA1 can return from the collapsed to the extended conformation without the aid of chaperone proteins. Here we show that EEA1 in a bulk solution can undergo multiple flexibility transition cycles driven by the energetics of Rab5 binding and unbinding as well as GTP hydrolysis. Each cycle can perform up to 20kBT of mechanical work. Hence, Rab5 and EEA1 constitute a two-component molecular motor driven by the chemical energy derived from the Rab5 GTPase cycle. We conclude that tethering proteins and their small GTPase partners can have active mechanical roles in membrane trafficking.
Engineering random spin models with atoms in a high-finesse cavity
Authors: Sauerwein Nick , Orsi Francesca , Uhrich Philipp , Bandyopadhyay Soumik , Mattiotti Francesco , Cantat-Moltrecht Tigrane , Pupillo Guido , Hauke Philipp , Brantut Jean-Philippe
Published: May 2023

All-to-all interacting, disordered quantum many-body models have a wide range of applications across disciplines, from spin glasses in condensed-matter physics over holographic duality in high-energy physics to annealing algorithms in quantum computing. Typically, these models are abstractions that do not find unambiguous physical realizations in nature. Here we realize an all-to-all interacting, disordered spin system by subjecting an atomic cloud in a cavity to a controllable light shift. Adjusting the detuning between atom resonance and cavity mode, we can tune between disordered versions of a central-mode model and a Lipkin–Meshkov–Glick model. By spectroscopically probing the low-energy excitations of the system, we explore the competition of interactions with disorder across a broad parameter range. We show how disorder in the central-mode model breaks the strong collective coupling, making the dark-state manifold cross over to a random distribution of weakly mixed light–matter, ‘grey’, states. In the Lipkin–Meshkov–Glick model, the ferromagnetic finite-sized ground state evolves towards a paramagnet as disorder is increased. In that regime, semi-localized eigenstates emerge, as we observe by extracting bounds on the participation ratio. These results present substantial steps towards freely programmable cavity-mediated interactions for the design of arbitrary spin Hamiltonians.
KIF2C accelerates the development of non-small cell lung cancer and is suppressed by miR-186-3p via the AKT-GSK3β-β-catenin pathway
Authors: Guo Junmei , Zhang Wei , Sun Liping , Yu Hongfang , Wang Yuzhe , Feng Li , Yang Hao
Published: May 2023

This study aimed to explore how kinesin family member 2C (KIF2C) influences the progression of non-small cell lung cancer (NSCLC). The levels of KIF2C and microRNA-186-3p (miR-186-3p) were examined by quantitative real-time polymerase chain reaction (qRT-PCR). Through the utilization of cell counting kit-8 (CCK-8) assay, colony formation assay, wound closure assay, and Transwell assay, NSCLC cell proliferation, migration, and invasion were identified, respectively. NSCLC cell apoptosis was assessed using the TUNEL assay and flow cytometry (FCM) assay. Luciferase reporter analysis was used to investigate the relationship between KIF2C and miR-186-3p. Western blot assays were conducted to investigate the influence of KIF2C on the AKT-GSK3β-β-catenin pathway. The results showed that KIF2C was up‐regulated in NSCLC cells, which predicted poor prognosis. KIF2C overexpression promoted the proliferation, migration, and invasion of NSCLC cells as well as inhibited NSCLC cell apoptosis. KIF2C was as a key target of miR-186-3p. High expression of KIF2C, meanwhile, increased the levels of β-catenin, p-GSK-3β and phosphorylated protein kinase B (p-AKT). KIF2C downregulation and miR-186-3p upregulation reversed these outcomes. As an oncogenic factor, KIF2C is negatively regulated by miR-186-3p and participates in the progression of NSCLC through the AKT-GSK3β-β-catenin pathway.
Improved PVC/ZnO Nanocomposite Insulation for High Voltage and High Temperature Applications
Authors: Faiza  , Khattak Abraiz , Alahmadi Ahmad Aziz , Ishida Hatsuo , Ullah Nasim
Published: May 2023

Nanosized inorganic oxides have the trends to improve many characteristics of solid polymer insulation. In this work, the characteristics of improved poly (vinyl chloride) (PVC)/ZnO are evaluated using 0, 2, 4 and 6 phr of ZnO nanoparticles dispersed in polymer matrix using internal mixer and finally compressed into circular disk with 80 mm diameter using compression molding technique. Dispersion properties are studied by scanning electron microscopy (SEM), Fourier transform infrared spectroscopy (FTIR), X-ray diffractometry (XRD), and optical microscopy (OM). The effect of filler on the electrical, optical, thermal, and dielectric properties of the PVC are also analyzed. Hydrophobicity of nano-composites is evaluated by measuring contact angle and recording hydrophobicity class using Swedish transmission research institute (STRI) classification method. Hydrophobic behavior decreases with the increase in filler content; contact angle increases up to 86°, and STRI class of HC3 for PZ4 is observed. Thermogravimetric analysis (TGA) and differential scanning calorimetry (DSC) are employed to evaluate the thermal properties of the samples. Also, continuous decrease of optical band gap energy from 4.04 eV for PZ0 to 2.57 eV for PZ6 is observed. In the meantime, an enhancement in the melting temperature, Tm, is observed from 172 to 215 °C. To check the stability of materials against hydrothermal stresses, all the fabricated materials are then subjected to a hydrothermal aging process for 1000 h and their structural stability is analyzed using optical microscopy and FTIR analyses.
SproutAngio: an open-source bioimage informatics tool for quantitative analysis of sprouting angiogenesis and lumen space
Authors: Beter M. , Abdollahzadeh A. , Pulkkinen H. H. , Huang H. , Orsenigo F. , Magnusson P. U. , Ylä-Herttuala S. , Tohka J. , Laakkonen J. P.
Published: May 2023

Three-dimensional image analyses are required to improve the understanding of the regulation of blood vessel formation and heterogeneity. Currently, quantitation of 3D endothelial structures or vessel branches is often based on 2D projections of the images losing their volumetric information. Here, we developed SproutAngio, a Python-based open-source tool, for fully automated 3D segmentation and analysis of endothelial lumen space and sprout morphology. To test the SproutAngio, we produced a publicly available in vitro fibrin bead assay dataset with a gradually increasing VEGF-A concentration (https://doi.org/10.5281/zenodo.7240927). We demonstrate that our automated segmentation and sprout morphology analysis, including sprout number, length, and nuclei number, outperform the widely used ImageJ plugin. We also show that SproutAngio allows a more detailed and automated analysis of the mouse retinal vasculature in comparison to the commonly used radial expansion measurement. In addition, we provide two novel methods for automated analysis of endothelial lumen space: (1) width measurement from tip, stalk and root segments of the sprouts and (2) paired nuclei distance analysis. We show that these automated methods provided important additional information on the endothelial cell organization in the sprouts. The pipelines and source code of SproutAngio are publicly available (https://doi.org/10.5281/zenodo.7381732).
Arterial stiffness and the non-dipping pattern in type 1 diabetes males with and without erectile dysfunction
Authors: Kulecki Michał , Naskret Dariusz , Kaminski Mikolaj , Kasprzak Dominika , Lachowski Pawel , Klause Daria , Kozlowska Maria , Flotynska Justyna , Uruska Aleksandra , Zozulinska-Ziolkiewicz Dorota
Published: May 2023

Arterial stiffness (AS) and non-dipping pattern are early predictors of cardiovascular diseases but are not used in clinical practice. We aimed to assess if AS and the non-dipping pattern are more prevalent in the erectile dysfunction (ED) group than in the non-ED group among subjects with type 1 diabetes (T1DM). The study group consisted of adults with T1DM. Aortic pulse wave velocity (PWV Ao)—a marker of increased AS, central systolic blood pressure, and heart rate (HR) were measured with a brachial oscillometric device (Arteriograph 24). Erectile dysfunction (ED) was assessed by the International Index of Erectile Function-5. A comparison between the groups with and without ED was performed. Of 34 investigated men with T1DM, 12 (35.3%) suffered from ED. The group with ED had higher mean 24 h HR (77.7 [73.7–86.5] vs 69.9 [64.0–76.8]/min; p = 0.04, nighttime PWV Ao (8.1 [6.8–8.5] vs 6.8 [6.1–7.5] m/s; p = 0.015) and prevalence of non-dipping SBP Ao pattern (11 [91.7] vs 12 [54.5]%; p = 0.027) than individuals without ED. The presence of ED detected a central non-dipping pattern with a sensitivity of 47.8% and a specificity of 90.9%. The central non-dipping pattern was more prevalent and the nighttime PWV was higher in T1DM subjects with ED than in those without ED.
Using single nucleotide polymorphism array for prenatal diagnosis in a large multicenter study in Southern China
Authors: Cai Meiying , Lin Na , Guo Nan , Su Linjuan , Wu Xiaoqing , Xie Xiaorui , Li Ying , He Shuqiong , Fu Xianguo , Xu Liangpu , Huang Hailong
Published: May 2023

Numerous studies have evaluated the use of single nucleotide polymorphism array (SNP-array) in prenatal diagnostics, but very few have evaluated its application under different risk conditions. Here, SNP-array was used for the retrospective analysis of 8386 pregnancies and the cases were categorized into seven groups. Pathogenic copy number variations (pCNVs) were found in 699 (8.3%, 699/8386) cases. Among the seven different risk factor groups, the non-invasive prenatal testing-positive group had the highest pCNVs rate (35.3%), followed by the abnormal ultrasound structure group (12.8%), and then the chromosomal abnormalities in the couples group (9.5%). Notably the adverse pregnancy history group presented with the lowest pCNVs rate (2.8%). Further evaluation of the 1495 cases with ultrasound abnormalities revealed that the highest pCNV rates were recorded in those cases with multiple system structure abnormalities (22.6%), followed by the groups with skeletal system (11.6%) and urinary system abnormalities (11.2%). A total of 3424 fetuses with ultrasonic soft markers were classified as having one, two, or three ultrasonic soft markers. The different pCNV rates in the three groups were statistically significant. There was little correlation between pCNVs and a previous history of adverse pregnancy outcomes, suggesting that genetic screening under these conditions should be evaluated on a case-by-case basis.
Comparative and phylogenetic analysis of the complete chloroplast genomes of six Polygonatum species (Asparagaceae)
Authors: Zhang Dongjuan , Ren Jing , Jiang Hui , Wanga Vincent Okelo , Dong Xiang , Hu Guangwan
Published: May 2023

Polygonatum Miller belongs to the tribe Polygonateae of Asparagaceae. The horizontal creeping fleshy roots of several species in this genus serve as traditional Chinese medicine. Previous studies have mainly reported the size and gene contents of the plastomes, with little information on the comparative analysis of the plastid genomes of this genus. Additionally, there are still some species whose chloroplast genome information has not been reported. In this study, the complete plastomes of six Polygonatum were sequenced and assembled, among them, the chloroplast genome of P. campanulatum was reported for the first time. Comparative and phylogenetic analyses were then conducted with the published plastomes of three related species. Results indicated that the whole plastome length of the Polygonatum species ranged from 154,564 bp (P. multiflorum) to 156,028 bp (P. stenophyllum) having a quadripartite structure of LSC and SSC separated by two IR regions. A total of 113 unique genes were detected in each of the species. Comparative analysis revealed that gene content and total GC content in these species were highly identical. No significant contraction or expansion was observed in the IR boundaries among all the species except P. sibiricum1, in which the rps19 gene was pseudogenized owing to incomplete duplication. Abundant long dispersed repeats and SSRs were detected in each genome. There were five remarkably variable regions and 14 positively selected genes were identified among Polygonatum and Heteropolygonatum. Phylogenetic results based on chloroplast genome strongly supported the placement of P. campanulatum with alternate leaves in sect. Verticillata, a group characterized by whorled leaves. Moreover, P. verticillatum and P. cyrtonema were displayed as paraphyletic. This study revealed that the characters of plastomes in Polygonatum and Heteropolygonatum maintained a high degree of similarity. Five highly variable regions were found to be potential specific DNA barcodes in Polygonatum. Phylogenetic results suggested that leaf arrangement was not suitable as a basis for delimitation of subgeneric groups in Polygonatum and the definitions of P. cyrtonema and P. verticillatum require further study.
The protective effects of electroacupuncture on intestinal barrier lesions in IBS and UC model
Authors: Liu Shuqing , Huang Qin , Huang Qianhui , Wang Yuemei , Li Sihui , Wang Junmeng , Wu Qiaofeng
Published: May 2023

Irritable bowel syndrome (IBS) and ulcerative colitis (UC) are two intestinal diseases with different pathological changes. Electroacupuncture (EA) at Zusanli (ST36) on both IBS and UC is widely used in clinic practice. But it is unclear whether acupuncture at one acupoint can treat two different intestinal diseases at different layers of intestinal barrier. To address this question, we explored three intestinal barrier lesions in IBS and UC mice with the aid of transcriptome data analysis and studied the efficacy of EA at ST36 on them. The transcriptome data analysis showed that both UC and IBS had disrupted intestinal barrier in various layers. And both UC and IBS had epithelial barrier lesions with reduction of ZO-1, Occludin and Claudin-1, while UC rather than IBS had the destruction of the mucus barrier with less MUC2 expression. As to the vascular barrier, UC showed a higher CD31 level and mesenteric blood flow reduction, while IBS showed a lower PV-1 level. EA at ST36 can significantly improve the above lesions of intestinal barrier of IBS and UC. Our results gave more details about the comprehensive protective effect of EA for UC and IBS. We guess the effect of acupuncture may be a kind of homeostasis regulation.
Antiproliferative effects of mitochondria-targeted N-acetylcysteine and analogs in cancer cells
Authors: Cheng Gang , Hardy Micael , Kalyanaraman Balaraman
Published: May 2023

N-acetylcysteine (NAC) has been used as an antioxidant drug in tumor cells and preclinical mice tumor xenografts, and it improves adaptive immunotherapy in melanoma. NAC is not readily bioavailable and is used in high concentrations. The effects of NAC have been attributed to its antioxidant and redox signaling role in mitochondria. New thiol-containing molecules targeted to mitochondria are needed. Here, mitochondria-targeted NAC with a 10-carbon alkyl side chain attached to a triphenylphosphonium group (Mito10-NAC) that is functionally similar to NAC was synthesized and studied. Mito10-NAC has a free sulfhydryl group and is more hydrophobic than NAC. Mito10-NAC is nearly 2000-fold more effective than NAC in inhibiting several cancer cells, including pancreatic cancer cells. Methylation of NAC and Mito10-NAC also inhibited cancer cell proliferation. Mito10-NAC inhibits mitochondrial complex I-induced respiration and, in combination with monocarboxylate transporter 1 inhibitor, synergistically decreased pancreatic cancer cell proliferation. Results suggest that the antiproliferative effects of NAC and Mito10-NAC are unlikely to be related to their antioxidant mechanism (i.e., scavenging of reactive oxygen species) or to the sulfhydryl group-dependent redox modulatory effects.
Association of SULT1A2 rs1059491 with obesity and dyslipidaemia in southern Chinese adults
Authors: Lv Hai-Yan , Shi Guifeng , Li Cai , Ye Ya-Fei , Chen Ya-Hong , Chen Li-Hua , Tung Tao-Hsin , Zhang Meixian
Published: May 2023

In the sulfotransferase (SULT) superfamily, members of the SULT1 family mainly catalyse the sulfonation reaction of phenolic compounds, which is involved in the phase II metabolic detoxification process and plays a key role in endocrine homeostasis. A coding variant rs1059491 in the SULT1A2 gene has been reported to be associated with childhood obesity. This study aimed to investigate the association of rs1059491 with the risk of obesity and cardiometabolic abnormalities in adults. This case‒control study included 226 normal weight, 168 overweight and 72 obese adults who underwent a health examination in Taizhou, China. Genotyping of rs1059491 was performed by Sanger sequencing in exon 7 of the SULT1A2 coding region. Chi-squared tests, one-way ANOVA, and logistic regression models were applied. The minor allele frequencies of rs1059491 in the overweight combined with obesity and control groups were 0.0292 and 0.0686, respectively. No differences in weight and body mass index were detected between the TT genotype and GT + GG genotype under the dominant model, but the levels of serum triglycerides were significantly lower in G-allele carriers than in non-G-allele carriers (1.02 (0.74–1.32) vs. 1.35 (0.83–2.13) mmol/L, P = 0.011). The GT + GG genotype of rs1059491 versus the TT genotype reduced the risk of overweight and obesity by 54% (OR 0.46, 95% CI 0.22–0.96, P = 0.037) after adjusting for sex and age. Similar results were observed for hypertriglyceridaemia (OR 0.25, 95% CI 0.08–0.74, P = 0.013) and dyslipidaemia (OR 0.37, 95% CI 0.17–0.83, P = 0.015). However, these associations disappeared after correction for multiple tests. This study revealed that the coding variant rs1059491 is nominally associated with a decreased risk of obesity and dyslipidaemia in southern Chinese adults. The findings will be validated in larger studies including more detailed information on genetic background, lifestyle and weight change with age.
Foreign stingers: South American freshwater river stingrays Potamotrygon spp. established in Indonesia
Authors: Jerikho Rikho , Akmal Surya Gentha , Hasan Veryl , Yonvitner  , Novák Jindřich , Magalhães André Lincoln Barroso , Maceda-Veiga Alberto , Tlusty Michael F. , Rhyne Andrew L. , Slavík Ondřej , Patoka Jiří
Published: May 2023

The pet trade is known to be one of the most important pathways of aquatic non-native species introduction and Indonesia is a significant trade partner. Popular ornamental South American river stingrays (Potamotrygon spp.) were introduced to Indonesia in the 1980s and the culture was established. Here we present a detailed Indonesian market and aquaculture survey, the volume of trade between January 2020 and June 2022, and the list of customer countries with the total amount of imported stingrays. Climate similarities between the native range of P. motoro and P. jabuti and Indonesia were analysed. A significant number of areas of Indonesian islands were identified as suitable for the establishment of this species. This was confirmed by the first record of probably established populations in the Brantas River (Java). In total 13 individuals including newborns were captured. The culture of potamotrygonid stingrays is unregulated in Indonesia, and the risk of the establishment of this predator and its potential spread is alarming for wildlife. Moreover, the first case of envenomation caused by Potamotrygon spp. in the wild outside of South America was recorded. The current condition is predicted as the ‘tip of the iceberg’ and continuous monitoring and mitigation of risks are strongly recommended.
Magnetic carbon Fe3O4 nanocomposites synthesized via Magnetic Induction Heating
Authors: Cervera-Gabalda L. , Gómez-Polo C.
Published: May 2023

Magnetic Induction Heating (MIH) of magnetite nanoparticles is employed as a novel synthesis procedure of carbon based magnetic nanocomposites. Magnetic nanoparticles (Fe3O4) and fructose (1:2 weight ratio) were mechanically mixed and submitted to a RF magnetic field (305 kHz). The heat generated by the nanoparticles leads to the decomposition of the sugar and to the formation of an amorphous carbon matrix. Two sets of nanoparticles, with mean diameter sizes of 20 and 100 nm, are comparatively analysed. Structural (X-ray diffraction, Raman spectroscopy, Transmission Electron Microscopy (TEM)), electrical and magnetic (resistivity, SQUID magnetometry) characterizations confirm the nanoparticle carbon coating through the MIH procedure. The percentage of the carbonaceous fraction is suitably increased controlling the magnetic heating capacity of the magnetic nanoparticles. The procedure enables the synthesis of multifunctional nanocomposites with optimized properties to be applied in different technological fields. Particularly, Cr (VI) removal from aqueous media is presented employing the carbon nanocomposite with 20 nm Fe3O4 nanoparticles.
Passive limb training modulates respiratory rhythmic bursts
Authors: Apicella Rosamaria , Taccola Giuliano
Published: May 2023

Exercise modifies respiratory functions mainly through the afferent feedback provided by exercising limbs and the descending input from suprapontine areas, two contributions that are still underestimated in vitro. To better characterize the role of limb afferents in modulating respiration during physical activity, we designed a novel experimental in vitro platform. The whole central nervous system was isolated from neonatal rodents and kept with hindlimbs attached to an ad-hoc robot (Bipedal Induced Kinetic Exercise, BIKE) driving passive pedaling at calibrated speeds. This setting allowed extracellular recordings of a stable spontaneous respiratory rhythm for more than 4 h, from all cervical ventral roots. BIKE reversibly reduced the duration of single respiratory bursts even at lower pedaling speeds (2 Hz), though only an intense exercise (3.5 Hz) modulated the frequency of breathing. Moreover, brief sessions (5 min) of BIKE at 3.5 Hz augmented the respiratory rate of preparations with slow bursting in control (slower breathers) but did not change the speed of faster breathers. When spontaneous breathing was accelerated by high concentrations of potassium, BIKE reduced bursting frequency. Regardless of the baseline respiratory rhythm, BIKE at 3.5 Hz always decreased duration of single bursts. Surgical ablation of suprapontine structures completely prevented modulation of breathing after intense training. Albeit the variability in baseline breathing rates, intense passive cyclic movement tuned fictive respiration toward a common frequency range and shortened all respiratory events through the involvement of suprapontine areas. These observations contribute to better define how the respiratory system integrates sensory input from moving limbs during development, opening new rehabilitation perspectives.
Precise measurement for line structure light vision sensor with large range
Authors: Sheng Wei-wei
Published: May 2023

High precision and large measurement range are the target of any one three-dimensional scanner. For a line structure light vision sensor, measurement precision depends on its calibration results, i.e., determining mathematical expression of the light plane in camera coordinate system. However, as calibration results are locally optimal solutions, high precise measurement in a large range is difficult. In this paper, we give a precise measurement method and the corresponding calibration procedure for a line structure light vision sensor with a large measurement range. A motorized linear translation stages with a travel range of 150 mm and a planar target which is a surface plate with a machining precision of 0.05 mm are utilized. With the help of the linear translation stage and the planar target, functions which gives the relationship between center point of the laser stripe and the perpendicular/ horizontal distance are obtained. Once image of light stripe is captured, we can get a precise measurement result from the normalized feature points. Compared with a traditional measurement method, distortion compensation is not necessary and precision of measurement is improved significantly. Experiments show that root mean square error of measurement results according to our proposed method is reduced by 64.67% related to the traditional method.
Programmed death-ligand 1 expression and overall survival in Thai patients with gastric cancer
Authors: Chitapanarux Taned , Gumrai Pawut , Kongkarnka Sarawut , Wannasai Komson , Lertprasertsuke Nirush
Published: May 2023

Programmed death-ligand 1 (PD-L1) expression has now been implicated in gastric cancer (GC). This study was conducted to determine the impact of clinicopathological characteristics on PD-L1 expression and its association with survival in GC patients receiving standard-of-care. In total, 268 GC patients receiving upfront surgery were enrolled at Chiang Mai University Hospital. PD-L1 expression was assayed by immunohistochemistry staining using the Dako 22C3 pharmDx. The rates of PD-L1 positivity by combined positive score (CPS) at a cutoff value of 1 and 5 were 22% and 7%. PD-L1 positivity was significantly higher in patients younger than 55 than those older than 55 (32.6% vs. 16.5%, p = 0.003; 11.6% vs. 4.4%, p = 0.027). PD-L1 positivity was observed more frequently in GC with metastases than without (25.2% vs. 17.1%, p = 0.112; 7.2% vs. 6.7%, p = 0.673). Patients with PD-L1 positive had a significantly shorter median overall survival than those with PD-L1 negative (32.7 vs. 41.6 months, p = 0.042, 27.6 vs. 40.8 months, p = 0.038). In conclusion, PD-L1 expression has been associated with young age, short survival, and metastases, although unrelated to the tumor stage. For GC patients, PD-L1 testing is recommended, especially among young patients with metastases.
Association between ultra-processed foods intake with lipid profile: a cross-sectional study
Authors: Nouri Mehran , Eskandarzadeh Sevda , Makhtoomi Maede , Rajabzadeh-Dehkordi Milad , Omidbeigi Niloofar , Najafi Maryam , Faghih Shiva
Published: May 2023

The purpose of this cross-sectional study was to examine the association between ultra-processed foods (UPFs) intake and lipid profile in Iranian people. The study was performed on 236 individuals with the age range of 20–50 years in Shiraz, Iran. Food intakes of the participants were evaluated using a 168-item food frequency questionnaire (FFQ) which was previously validated in Iranian populations. In order to estimate the ultra-processed foods intake, classification of NOVA food group was used. Serum lipids including total cholesterol (TC), triglyceride (TG), high density lipoprotein cholesterol (HDL-C) and low density lipoprotein cholesterol (LDL-C) were measured. The results showed that mean of age and body mass index (BMI) of the participants were 45.98 years and 28.28 kg/m2, respectively. Logistic regression was used to evaluation the relation between UPFs intake and lipid profile. Higher UPFs intake was associated with increased OR of TG and HDL abnormality in both crude (OR 3.41; 95% CI 1.58, 7.34; P-trend = 0.001 and OR 2.99; 95% CI 1.31, 6.82; P-trend = 0.010) and adjusted models (OR 3.69; 95% CI 1.67, 8.16; P-trend = 0.001 and OR 3.38 95% CI 1.42, 8.07; P-trend = 0.009). But, there were no association between UPFs intake and other indices of lipid profile. Also, we found significant associations between UPFs intake and dietary nutrient profiles. In conclusion, UPFs consumption could worsen the nutritional profile of the diet and lead to negative changes in some indices of the lipid profile.
Voice disorder classification using convolutional neural network based on deep transfer learning
Authors: Peng Xiangyu , Xu Huoyao , Liu Jie , Wang Junlang , He Chaoming
Published: May 2023

Voice disorders are very common in the global population. Many researchers have conducted research on the identification and classification of voice disorders based on machine learning. As a data-driven algorithm, machine learning requires a large number of samples for training. However, due to the sensitivity and particularity of medical data, it is difficult to obtain sufficient samples for model learning. To address this challenge, this paper proposes a pretrained OpenL3-SVM transfer learning framework for the automatic recognition of multi-class voice disorders. The framework combines a pre-trained convolutional neural network, OpenL3, and a support vector machine (SVM) classifier. The Mel spectrum of the given voice signal is first extracted and then input into the OpenL3 network to obtain high-level feature embedding. Considering the effects of redundant and negative high-dimensional features, model overfitting easily occurs. Therefore, linear local tangent space alignment (LLTSA) is used for feature dimension reduction. Finally, the obtained dimensionality reduction features are used to train the SVM for voice disorder classification. Fivefold cross-validation is used to verify the classification performance of the OpenL3-SVM. The experimental results show that OpenL3-SVM can effectively classify voice disorders automatically, and its performance exceeds that of the existing methods. With continuous improvements in research, it is expected to be considered as auxiliary diagnostic tool for physicians in the future.
Intensity correlation scan (IC-scan) technique to characterize the optical nonlinearities of scattering media
Authors: Crispim Mariana J. B. , Pereira Cícera C. S. , Oliveira Nathália T. C. , Chevrollier Martine , de Oliveira Rafael A. , Martins Weliton S. , Reyna Albert S.
Published: May 2023

Light scattering, whether caused by desired or spurious elements, is considered one of the main phenomena that present great challenges for the nonlinear (NL) optical characterization of turbid media. The most relevant disturbing factor is the random deformation suffered by the spatial intensity distribution of the laser beam due to multiple scattering. In this work, we report the intensity correlation scan (IC-scan) technique as a new tool to characterize the NL optical response of scattering media, by taking advantage of light scattering to generate speckle patterns sensitive to wavefront changes induced by the self-focusing and self-defocusing effects. Peak-to-valley transmittance curves, with a higher signal-to-noise ratio, are obtained by analyzing the spatial intensity correlation functions of the different speckle patterns, even in very turbid media where conventional NL spectroscopy techniques fail. To demonstrate the potential of the IC-scan technique, the NL characterization of colloids that contain a high concentration of silica nanospheres as scatterers, as well as gold nanorods, which act as NL particles and light scatterers, was performed. The results show that the IC-scan technique is more accurate, precise and robust to measure NL refractive indices in turbid media, overcoming limitations imposed by well-established Z-scan and D4σ techniques.
Neuromorphic acoustic sensing using an adaptive microelectromechanical cochlea with integrated feedback
Authors: Lenk Claudia , Hövel Philipp , Ved Kalpan , Durstewitz Steve , Meurer Thomas , Fritsch Tobias , Männchen Andreas , Küller Jan , Beer Daniel , Ivanov Tzvetan , Ziegler Martin
Published: May 2023

Many speech processing systems struggle in conditions with low signal-to-noise ratios and in changing acoustic environments. Adaptation at the transduction level with integrated signal processing could help to address this; in human hearing, transduction and signal processing are integrated and can be adaptively tuned for noisy conditions. Here we report a microelectromechanical cochlea as a bio-inspired acoustic sensor with integrated signal processing functionality. Real-time feedback is used to tune the sensing and processing properties, and dynamic switching between linear and nonlinear characteristics improves the detection of signals in noisy conditions, increases the sensor dynamic range and enables adaptation to changing acoustic environments. The transition to nonlinear behaviour is attributed to a Hopf bifurcation and we experimentally validate its dependence on sensor and feedback parameters. We also show that output-signal coupling between two coupled sensors can increase the frequency coverage.
Coherent structures at the origin of time irreversibility in wall turbulence
Authors: Iacobello Giovanni , Chowdhuri Subharthi , Ridolfi Luca , Rondoni Lamberto , Scarsoglio Stefania
Published: May 2023

Time irreversibility is a distinctive feature of non-equilibrium phenomena such as turbulent flows, where irreversibility is mainly associated with an energy cascade process. The connection between time irreversibility and coherent motions in wall turbulence, however, has not been investigated yet. An Eulerian, multiscale analysis of time irreversibility in wall-bounded turbulence is proposed in this study, which differs from previous works relying on a Lagrangian approach and mainly focusing on homogeneous turbulence. Outcomes reveal a strong connection between irreversibility levels and coherent structures in both turbulent channel and boundary layer flows. In the near-wall region, irreversibility is directly related to the inner spectral peak originating from small-scale turbulent structures in the buffer layer. Conversely, stronger irreversibility is found in correspondence to the outer spectral peak originating from larger turbulent flow scales far from the wall. Our results represent a first effort to characterize Eulerian TI in wall-bounded turbulent flows, thus paving the way for further developments in wall-turbulence modeling and control accounting for broken temporal symmetry.
Human placenta/umbilical cord derivatives in regenerative medicine – Prospects and challenges
Authors: Biswas Asmita , Rajasekaran Ragavi , Saha Baisakhee , Dixit Krishna , Vaidya Pravin Vasudeo , Ojha Atul Kumar , Dhara Santanu
Published: May 2023

Graphical abstract depicting applications of MSCs and decellularized ECM isolated from the placenta and umbilical cord (created with BioRender.com).
Effect of the preparation method on the catalytic properties of copper-containing zeolite Y applied for NH3-SCR-DeNOx
Authors: Suharbiansah Rujito S. R. , Lukman Muhammad Fernadi , Nannuzzi Chiara , Wach Anna , Góra-Marek Kinga , Liebau Michael , Palčić Ana , Pöppl Andreas , Berlier Gloria , Bordiga Silvia , Gläser Roger , Jabłońska Magdalena
Published: May 2023

The effect of the preparation method on the catalytic properties of copper-containing zeolite Y samples applied for NH3-SCR-DeNOx was investigated.
A proficient multivariate approach for iron(ii) spin crossover behaviour modelling in the solid state
Authors: Marchi Lorenzo , Fantuzzi Simone , Cingolani Andrea , Messori Alessandro , Mazzoni Rita , Zacchini Stefano , Cocchi Marina , Rigamonti Luca
Published: May 2023

A multivariate approach allows the treatment of coordination structural data of complexes [Fe(bpp-R)2](X)2·solvent into unified models that take into account the crystal packing effects on the modulation of the magnetic features in the solid state.
Taurochenodeoxycholic acid inhibits intestinal epithelial cell proliferation and induces apoptosis independent of the farnesoid X receptor
Authors: Liu Yichun , Niu Kaimin , Wang Ruxia , Liang Xiaoxiao , Lin Chong , Wu Xin , Zhai Zhenya
Published: May 2023

Bile acids, such as taurochenodeoxycholic acid (TCDCA), are considered as functional small molecules involved in nutrition regulation or acting with adjuvant therapeutic effects against metabolic or immune diseases.
Asperuloside, the bioactive compound in the edible Eucommia ulmoides male flower, delays muscle aging by daf-16 mediated improvement in mitochondrial dysfunction
Authors: Chen Qi , Zhang Qinjun , Amrouche Amel Thanina , Huang Weisu , Lu Baiyi
Published: May 2023

We determined that the iridoid-rich extract of the edible Eucommia ulmoides male flower and its main bioactive compound asperuloside exerted an anti-muscle aging role in C. elegans.
Development of water-soluble phenazine-2,3-diol-based photosensitizers for singlet oxygen generation
Authors: Yagi Kazunori , Ohira Kazuki , Yamana Keita , Imato Keiichi , Kawasaki Riku , Ikeda Atsushi , Ooyama Yousuke
Published: May 2023

We developed phenazine-2,3-diol-based photosensitizers bearing carboxylic acid salts which possess high solubility and moderate 1O2 generation ability in water.
Oxidative transformations of olefins employing persulfate/visible light irradiation in water
Authors: Peagno Gabriel S. G. , Salles Airton G.
Published: May 2023

A visible light-promoted photocatalyst-free activation of ammonium persulfate in water to perform photooxidations employing several types of olefins is reported.
Efficient ammonia photosynthesis from nitrate by graphene/Si Schottky junction integrated with Ni–Fe LDH catalyst
Authors: Chiang Chun-Hao , Kao Yu-Ting , Wu Po-Hsien , Liu Ting-Ran , Lin Jia-Wei , Chen Po-Tuan , Lin Jr-Wen , Yang Shan-Chiao , Chen Hsuen-Li , Patil Shivaraj B. , Wang Di-Yan , Chen Chun-Wei
Published: May 2023

A Ni–Fe LDH/graphene/Si heterojunction photocathode for nitrate-to-ammonia conversion with a faradaic efficiency of 92.5% is demonstrated by direct and facile integration of Ni–Fe LDH through the single-layer graphene conductive path.