bluuebunny/crossref_metadata_2025 huggingface dataset:
Physical and chemical descriptors for predicting interfacial thermal resistance
Authors: Wu Yen-Ju , Zhan Tianzhuo , Hou Zhufeng , Fang Lei , Xu Yibin
Published: February 2020

Heat transfer at interfaces plays a critical role in material design and device performance. Higher interfacial thermal resistances (ITRs) affect the device efficiency and increase the energy consumption. Conversely, higher ITRs can enhance the figure of merit of thermoelectric materials by achieving ultra-low thermal conductivity via nanostructuring. This study proposes a dataset of descriptors for predicting the ITRs. The dataset includes two parts: one part consists of ITRs data collected from 87 experimental papers and the other part consists of the descriptors of 289 materials, which can construct over 80,000 pair-material systems for ITRs prediction. The former part is composed of over 1300 data points of metal/nonmetal, nonmetal/nonmetal, and metal/metal interfaces. The latter part consists of physical and chemical properties that are highly correlated to the ITRs. The synthesis method of the materials and the thermal measurement technique are also recorded in the dataset for further analyses. These datasets can be applied not only to ITRs predictions but also to thermal-property predictions or heat transfer on various material systems.
Immobilization of β-Glucosidase from Thermatoga maritima on Chitin-functionalized Magnetic Nanoparticle via a Novel Thermostable Chitin-binding Domain
Authors: Alnadari Fawze , Xue Yemin , Zhou Liang , Hamed Yahya S. , Taha Mohamed , Foda Mohamed F.
Published: February 2020

Enzyme immobilization is a powerful tool not only as a protective agent against harsh reaction conditions but also for the enhancement of enzyme activity, stability, reusability, and for the improvement of enzyme properties as well. Herein, immobilization of β-glucosidase from Thermotoga maritima (Tm-β-Glu) on magnetic nanoparticles (MNPs) functionalized with chitin (Ch) was investigated. This technology showed a novel thermostable chitin-binding domain (Tt-ChBD), which is more desirable in a wide range of large-scale applications. This exclusive approach was fabricated to improve the Galacto-oligosaccharide (GOS) production from a cheap and abundant by-product such as lactose through a novel green synthesis route. Additionally, SDS-PAGE, enzyme activity kinetics, transmission electron microscopy (TEM) and Fourier transform infrared spectroscopy (FT-IR) revealed that among the immobilization strategies for Thermotoga maritime-β-Glucosidase thermostable chitin-binding domain (Tm-β-Glu-Tt-ChBD) on the attractive substrate; Ch-MNPs had the highest enzyme binding capacity and GOS production ratio when compared to the native enzyme. More interestingly, a magnetic separation technique was successfully employed in recycling the immobilized Tm-β-Glu for repetitive batch-wise GOS without significant loss or reduction of enzyme activity. This immobilization system displayed an operative stability status under various parameters, for instance, temperature, pH, thermal conditions, storage stabilities, and enzyme kinetics when compared with the native enzyme. Conclusively, the GOS yield and residual activity of the immobilized enzyme after the 10th cycles were 31.23% and 66%, respectively. Whereas the GOS yield from native enzyme synthesis was just 25% after 12 h in the first batch. This study recommends applying Tt-ChBD in the immobilization process of Tm-β-Glu on Ch-MNPs to produce a low-cost GOS as a new eco-friendly process besides increasing the biostability and efficiency of the immobilized enzyme.
Conversion of walnut tyrosinase into a catechol oxidase by site directed mutagenesis
Authors: Panis Felix , Kampatsikas Ioannis , Bijelic Aleksandar , Rompel Annette
Published: February 2020

Polyphenol oxidases (PPOs) comprise tyrosinases (TYRs) and catechol oxidases (COs), which catalyse the initial reactions in the biosynthesis of melanin. TYRs hydroxylate monophenolic (monophenolase activity) and oxidize diphenolic (diphenolase activity) substrates, whereas COs react only with diphenols. In order to elucidate the biochemical basis for the different reactions in PPOs, cDNA from walnut leaves was synthesized, the target gene encoding the latent walnut tyrosinase (jrPPO1) was cloned, and the enzyme was heterologously expressed in Escherichia coli. Mutations targeting the two activity controller residues (Asn240 and Leu244) as well as the gatekeeper residue (Phe260) were designed to impair monophenolase activity of jrPPO1. For the first time, monophenolase activity of jrPPO1 towards L-tyrosine was blocked in two double mutants (Asn240Lys/Leu244Arg and Asn240Thr/Leu244Arg) while its diphenolase activity was partially preserved, thereby converting jrPPO1 into a CO. Kinetic data show that recombinant jrPPO1 resembles the natural enzyme, and spectrophotometric investigations proved that the copper content remains unaffected by the mutations. The results presented herein provide experimental evidence that a precisely tuned interplay between the amino acids located around the active center controls the substrate specificity and therewith the mono- versus diphenolase activity in the type-III copper enzyme jrPPO1.
Patterns of floral nectar standing crops allow plants to manipulate their pollinators
Authors: Pyke Graham H. , Kalman John R. M. , Bordin Dayanne M. , Blanes Lucas , Doble Philip A.
Published: February 2020

‘Pollination syndromes’ involving floral nectar have eluded satisfactory evolutionary explanation. For example, floral nectars for vertebrate-pollinated plants average low sugar concentrations, while such animals prefer high concentrations, perplexing pollination biologists and arousing recent controversy. Such relationships should result from evolutionary games, with plants and pollinators adopting Evolutionarily Stable Strategies, and nectar manipulating rather than attracting pollinators. Plant potential to manipulate pollinators depends on relationships between neighbouring flowers within plants, for all nectar attributes, but this has not been investigated. We measured nectar volume, concentration and sugar composition for open flowers on naturally-growing Blandfordia grandiflora plants, presenting classic bird-pollinated plant syndrome. To evaluate potential pollinator manipulation through nectar, we analysed relationships between neighbouring flowers for nectar volume, concentration, proportion sucrose, log(fructose/glucose), and sugar weight. To evaluate potential attraction of repeat-visits to flowers or plants through nectar, we compared attributes between successive days. Nearby flowers were positively correlated for all attributes, except log(fructose/glucose) as fructose≈glucose. Most relationships between nectar attributes for flowers and plants on successive days were non-significant. Nectar-feeding pollinators should therefore decide whether to visit another flower on a plant, based on all attributes of nectar just-obtained, enabling plants to manipulate pollinators through adjusting nectar. Plants are unlikely to attract repeat pollinator-visits through nectar production. Floral nectar evolution is conceptually straightforward but empirically challenging. A mutant plant deviating from the population in attributes of nectar-production per flower would manipulate, rather than attract, nectar-feeding pollinators, altering pollen transfer, hence reproduction. However, links between floral nectar and plant fitness present empirical difficulties.
Raman-free fibered photon-pair source
Authors: Cordier Martin , Delaye Philippe , Gérôme Frédéric , Benabid Fetah , Zaquine Isabelle
Published: February 2020

Raman-scattering noise in silica has been the key obstacle toward the realisation of high quality fiber-based photon-pair sources. Here, we experimentally demonstrate how to get past this limitation by dispersion tailoring a xenon-filled hollow-core photonic crystal fiber. The source operates at room temperature, and is designed to generate Raman-free photon-pairs at useful wavelength ranges, with idler in the telecom, and signal in the visible range. We achieve a coincidence-to-accidentals ratio as high as 2740 combined with an ultra low heralded second order coherence $${g}_{H}^{(2)}(0)=0.002$$

g

H

(
2
)

(
0
)
=
0.002
, indicating a very high signal to noise ratio and a negligible multi-photon emission probability. Moreover, by gas-pressure tuning, we demonstrate the control of photon frequencies over a range as large as 13 THz, covering S-C and L telecom band for the idler photon. This work demonstrates that hollow-core photonic crystal fiber is an excellent platform to design high quality photon-pair sources, and could play a driving role in the emerging quantum technology.
Pectin Interaction with Immune Receptors is Modulated by Ripening Process in Papayas
Authors: Prado Samira B. R. , Beukema Martin , Jermendi Eva , Schols Henk A. , de Vos Paul , Fabi João Paulo
Published: February 2020

Dietary fibers have been shown to exert immune effects via interaction with pattern recognition receptors (PRR) such as toll-like receptors (TLR) and nucleotide-binding oligomerization domain (NOD)-like receptors. Pectin is a dietary fiber that interacts with PRR depending on its chemical structure. Papaya pectin retains different chemical structures at different ripening stages. How this influence PRR signaling is unknown. The aim of this work was to determine how ripening influences pectin structures and their ability to interact with TLR2, 3, 4, 5 and 9, and NOD1 and 2. It was evaluated the interaction of the water-soluble fractions rich in pectin extracted from unripe to ripe papayas. The pectin extracted from ripe papayas activated all the TLR and, to a lesser extent, the NOD receptors. The pectin extracted from unripe papayas also activated TLR2, 4 and 5 but inhibited the activation of TLR3 and 9. The differences in pectin structures are the higher methyl esterification and smaller galacturonan chains of pectin from ripe papayas. Our finding might lead to selection of ripening stages for tailored modulation of PRR to support or attenuate immunity.
DNA sequence context as a marker of CpG methylation instability in normal and cancer tissues
Authors: Scala Giovanni , Federico Antonio , Palumbo Domenico , Cocozza Sergio , Greco Dario
Published: February 2020

DNA methylation alterations are related to multiple molecular mechanisms. The DNA context of CpG sites plays a crucial role in the maintenance and stability of methylation patterns. The quantitative relationship between DNA composition and DNA methylation has been studied in normal as well as pathological conditions, showing that DNA methylation status is highly dependent on the local sequence context. In this work, we describe this relationship by analyzing the DNA sequence context associated to methylation profiles in both physiological and pathological conditions. In particular, we used DNA motifs to describe methylation stability patterns in normal tissues and aberrant methylation events in cancer lesions. In this manuscript, we show how different groups of DNA sequences can be related to specific epigenetic events, across normal and cancer tissues, and provide a thorough structural and functional characterization of these sequences.
Stratifying cellular metabolism during weight loss: an interplay of metabolism, metabolic flexibility and inflammation
Authors: Tareen Samar H. K. , Kutmon Martina , de Kok Theo M. , Mariman Edwin C. M. , van Baak Marleen A. , Evelo Chris T. , Adriaens Michiel E. , Arts Ilja C. W.
Published: February 2020

Obesity is a global epidemic, contributing significantly to chronic non-communicable diseases, such as type 2 diabetes mellitus, cardiovascular diseases and metabolic syndrome. Metabolic flexibility, the ability of organisms to switch between metabolic substrates, is found to be impaired in obesity, possibly contributing to the development of chronic illnesses. Several studies have shown the improvement of metabolic flexibility after weight loss. In this study, we have mapped the cellular metabolism of the adipose tissue from a weight loss study to stratify the cellular metabolic processes and metabolic flexibility during weight loss. We have found that for a majority of the individuals, cellular metabolism was downregulated during weight loss, with gene expression of all major cellular metabolic processes (such as glycolysis, fatty acidβ-oxidation etc.) being lowered during weight loss and weight maintenance. Parallel to this, the gene expression of immune system related processes involving interferons and interleukins increased. Previously, studies have indicated both negative and positive effects of post-weight loss inflammation in the adipose tissue with regards to weight loss or obesity and its co-morbidities; however, mechanistic links need to be constructed in order to determine the effects further. Our study contributes towards this goal by mapping the changes in gene expression across the weight loss study and indicates possible cross-talk between cellular metabolism and inflammation.
Inhibition of Serine Protease Activity Protects Against High Fat Diet-Induced Inflammation and Insulin Resistance
Authors: Kuo Chin-Sung , Chen Jia-Shiong , Lin Liang-Yu , Schmid-Schönbein Geert W. , Chien Shu , Huang Po-Hsun , Chen Jaw-Wen , Lin Shing-Jong
Published: February 2020

Recent evidence suggests that enhanced protease-mediated inflammation may promote insulin resistance and result in diabetes. This study tested the hypothesis that serine protease plays a pivotal role in type 2 diabetes, and inhibition of serine protease activity prevents hyperglycemia in diabetic animals by modulating insulin signaling pathway. We conducted a single-center, cross-sectional study with 30 healthy controls and 57 patients with type 2 diabetes to compare plasma protease activities and inflammation marker between groups. Correlations of plasma total and serine protease activities with variables were calculated. In anin-vivostudy, LDLR−/−mice were divided into normal chow diet, high-fat diet (HFD), and HFD with selective serine protease inhibition groups to examine the differences of obesity, blood glucose level, insulin resistance and serine protease activity among groups. Compared with controls, diabetic patients had significantly increased plasma total protease, serine protease activities, and also elevated inflammatory cytokines. Plasma serine protease activity was positively correlated with body mass index, hemoglobin A1c, homeostasis model assessment-insulin resistance index (HOMA-IR), tumor necrosis factor-α, and negatively with adiponectin concentration. In the animal study, administration of HFD progressively increased body weight, fasting glucose level, HOMA-IR, and upregulated serine protease activity. Furthermore,in-vivoserine protease inhibition significantly suppressed systemic inflammation, reduced fasting glucose level, and improved insulin resistance, and these effects probably mediated by modulating insulin receptor and cytokine expression in visceral adipose tissue. Our findings support the serine protease may play an important role in type 2 diabetes and suggest a rationale for a therapeutic strategy targeting serine protease for clinical prevention of type 2 diabetes.
Olive fruit volatiles route intraspecific interactions and chemotaxis in Bactrocera oleae (Rossi) (Diptera: Tephritidae) females
Authors: Giunti Giulia , Campolo Orlando , Laudani Francesca , Algeri Giuseppe Massimo , Palmeri Vincenzo
Published: February 2020

Plant nutritional quality and chemical characteristics may affect the fitness of phytophagous insects. Here, the olfactory preferences ofBactrocera oleae(Rossi) females toward olives with different maturation and infestation status were evaluated in three cultivars: Ottobratica, Roggianella and Sinopolese. Volatile profiles from olives were identified by SPME/GC-MS. Choice tests were performed to determine the responses ofB. oleaeadult females toward fruits and pure chemicals linked to infestation degree. Cultivar was the main source of variability explaining the differences recorded in volatile emissions. Moreover, three VOCs [β-myrcene, limonene and (E)-β-ocimene] were associated to infestation status across all olive varieties. In choice-tests,B. oleaefemales always preferred the olfactory cues from low-infested over high-infested fruits. Therefore, choice-tests using synthetic VOCs, emitted in greater amount by high-infested fruit, were arranged in order to identify putativeB. oleaekairomones. While females were indifferent toβ-myrcene, the highest dosages of limonene and (E)-β-ocimene were unfavoured by the tested flies, which preferentially moved toward the empty arm of the Y-tube. Furthermore, females preferred the lowest concentration ofβ-ocimene compared to the highest one. These results supported our hypothesis that fruit VOCs may serve as kairomones for female flies.
Renal cyst growth is attenuated by a combination treatment of tolvaptan and pioglitazone, while pioglitazone treatment alone is not effective
Authors: Kanhai Anish A. , Bange Hester , Verburg Lotte , Dijkstra Kyra L. , Price Leo S. , Peters Dorien J. M. , Leonhard Wouter N.
Published: February 2020

Autosomal Dominant Polycystic Kidney Disease (ADPKD) is one of the most common monogenic disorders, characterized by the progressive formation of fluid-filled cysts. Tolvaptan is an approved drug for ADPKD patients, but is also associated with multiple side effects. The peroxisome proliferator-activator receptor gamma (PPARγ) agonist pioglitazone slows disease progression in the PCK rat model for PKD. Here, we tested whether a combination treatment of relevant doses of tolvaptan and pioglitazone leads to improved efficacy in an adult-onset PKD mouse model. Tolvaptan indeed slowed PKD progression, but the combination treatment was not more effective than tolvaptan alone. In addition, although pioglitazone raised plasma levels of its surrogate drug marker adiponectin, the drug unexpectedly failed to slow PKD progression. The pioglitazone target PPARγ was expressed at surprisingly low levels in mouse, rat and human kidneys. Other pioglitazone targets were more abundantly expressed, but this pattern was comparable across various species. The data suggest that several potential pharmacokinetic and pharmacodynamic (PK/PD) differences between different species may underlie whether or not pioglitazone is able to slow PKD progression. The ongoing phase II clinical trial with low-dose pioglitazone treatment (NCT02697617) will show whether pioglitazone is a suitable drug candidate for ADPKD treatment.
Beta-Glycerophosphate-Induced ORAI1 Expression and Store Operated Ca2+ Entry in Megakaryocytes
Authors: Pelzl Lisann , Sahu Itishri , Ma Ke , Heinzmann David , Bhuyan Abdulla Al Mamun , al-Maghout Tamer , Sukkar Basma , Sharma Yamini , Marini Irene , Rigoni Flaviana , Artunc Ferruh , Cao Hang , Gutti Ravi , Voelkl Jakob , Pieske Burkert , Gawaz Meinrad , Bakchoul Tamam , Lang Florian
Published: February 2020

Impairment of renal phosphate elimination in chronic kidney disease (CKD) leads to enhanced plasma and tissue phosphate concentration, which in turn up-regulates transcription factor NFAT5 and serum & glucocorticoid-inducible kinase SGK1. The kinase upregulates ORAI1, a Ca2+-channel accomplishing store-operated Ca2+-entry (SOCE). ORAI1 is stimulated following intracellular store depletion by Ca2+-sensors STIM1 and/or STIM2. In megakaryocytes and blood platelets SOCE and thus ORAI1 are powerful regulators of activity. The present study explored whether the phosphate-donor ß-glycerophosphate augments NFAT5, ORAI1,2,3 and/or STIM1,2 expressions and thus SOCE in megakaryocytes. Human megakaryocytic Meg01cells were exposed to 2 mM of phosphate-donor ß-glycerophosphate for 24 hours. Platelets were isolated from blood samples of patients with impaired kidney function or control volunteers. Transcript levels were estimated utilizing q-RT-PCR, cytosolic Ca2+-concentration ([Ca2+]i) by Fura-2-fluorescence, and SOCE from increase of [Ca2+]i following re-addition of extracellular Ca2+ after store depletion with thapsigargin (1 µM). NFAT5 and ORAI1 protein abundance was estimated with Western blots. As a result, ß-glycerophosphate increased NFAT5, ORAI1/2/3, STIM1/2 transcript levels, as well as SOCE. Transcript levels of NFAT5, SGK1, ORAI1/2/3, and STIM1/2 as well as NFAT5 and ORAI1 protein abundance were significantly higher in platelets isolated from patients with impaired kidney function than in platelets from control volunteers. In conclusion, phosphate-donor ß-glycerophosphate triggers a signaling cascade of NFAT5/SGK1/ORAI/STIM, thus up-regulating store-operated Ca2+-entry.
Quantifying Induced Polarization of Conductive Inclusions in Porous Media and Implications for Geophysical Measurements
Authors: Feng Lang , Li Qiuzi , Cameron Stephen D. , He Kuang , Colby Robert , Walker Katie M. , Deckman Harry W. , Ertaş Deniz
Published: February 2020

Induced polarization (IP) mapping has gained increasing attention in the past decades, as electrical induced polarization has been shown to provide interesting signatures for detecting the presence of geological materials such as clay, ore, pyrite, and potentially, hydrocarbons. However, efforts to relate complex conductivities associated with IP to intrinsic physical properties of the corresponding materials have been largely empirical. Here we present a quantitative interpretation of induced polarization signatures from brine-filled rock formations with conductive inclusions and show that new opportunities in geophysical exploration and characterization could arise. Initially tested with model systems with solid conductive inclusions, this theory is then extended and experimentally tested with nanoporous conductors that are shown to have a distinctive spectral IP response. Several of the tests were conducted with nano-porous sulfides (pyrite) produced by sulfate-reducing bacteria grown in the lab in the presence of a hydrocarbon source, as well as with field samples from sapropel formations. Our discoveries and fundamental understanding of the electrode polarization mechanism with solid and porous conductive inclusions suggest a rigorous new approach in geophysical exploration for mineral deposits. Moreover, we show how induced polarization of biologically generated mineral deposits can yield a new paradigm for basin scale hydrocarbon exploration.
Different abilities needed at home and school: The relation between executive function and adaptive behaviour in adolescents with Down syndrome
Authors: Sabat Camila , Arango Paulina , Tassé Marc J. , Tenorio Marcela
Published: February 2020

Studies have shown that executive function abilities are related and have predictive power over adaptive behaviour in both typical and atypical populations. This study examined the relationship between executive functioning and adaptive behaviour in adolescents with Down syndrome, as it has not been studied before in this population. We propose and test a model of how each core EF (i.e., working memory, inhibition, and flexibility) contributes to each domain of AB (i.e., conceptual, social, and practical). We found that parent reported Conceptual skills were related to working memory, while teacher reported Conceptual and Practical skills were related to inhibition and flexibility. We hypothesise that these findings are related to the different requirements and expectations of the home and school environments: the more predictable home environment requires the adolescent to rely on working memory for his everyday activities, while the changing and challenging school environment requires the inhibition common behaviours and to flexibly change actions to be successful.
Negatively charged amino acids at the foot-and-mouth disease virus capsid reduce the virion-destabilizing effect of viral RNA at acidic pH
Authors: Caridi Flavia , López-Argüello Silvia , Rodríguez-Huete Alicia , Torres Elisa , Bustos María J. , Cañas-Arranz Rodrigo , Martín-Acebes Miguel A. , Mateu Mauricio G. , Sobrino Francisco
Published: February 2020

Elucidation of the molecular basis of the stability of foot-and-mouth disease virus (FMDV) particles is relevant to understand key aspects of the virus cycle. Residue N17D in VP1, located at the capsid inner surface, modulates the resistance of FMDV virion to dissociation and inactivation at acidic pH. Here we have studied whether the virion-stabilizing effect of amino acid substitution VP1 N17D may be mediated by the alteration of electrostatic charge at this position and/or the presence of the viral RNA. Substitutions that either introduced a positive charge (R,K) or preserved neutrality (A) at position VP1 17 led to increased sensitivity of virions to inactivation at acidic pH, while replacement by negatively charged residues (D,E) increased the resistance of virions to acidic pH. The role in virion stability of viral RNA was addressed using FMDV empty capsids that have a virtually unchanged structure compared to the capsid in the RNA-filled virion, but that are considerably more resistant to acidic pH than WT virions, supporting a virion-destabilizing effect of the RNA. Remarkably, no differences were observed in the resistance to dissociation at acidic pH between the WT empty capsids and those harboring replacement N17D. Thus, the virion-destabilizing effect of viral RNA at acidic pH can be partially restored by introducing negatively charged residues at position VP1 N17.
Dynamical Analysis of Standing Balance Control on Sloped Surfaces in Individuals with Lumbar Disc Herniation
Authors: Li Jinping , Zhang Yang , Song Shasha , Hou Ying , Hong Yigen , Yue Shouwei , Li Ke
Published: February 2020

The changes of balance control mechanism caused by lumbar disc herniation (LDH) has not been well understood. This study aimed to investigate the effects of LDH on the balance control during standing on sloped surfaces. Ten patients with LDH and 10 gender- and age-matched healthy subjects were instructed to stand quietly on a sloped surface at −5°, 0° or +5°, respectively. The trajectories of the center of pressure (COP) of each individual limb and the full-body were recorded. Cross recurrence quantification analysis (CRQA) was applied to assess the coordination of COP components at the anterior-posterior and medial-lateral directions. The patients with LDH presented magnified inter-limb load asymmetry and had more deterministic components in the COP coordination of the less-affected limb and the full-body than the healthy subjects. The LDH led to decreased dynamical degree of freedom and less flexibility in bidirectional controlling the center of mass simultaneously. The effects of sensorimotor deficits due to LDH could be more obviously exhibited as standing on a declined rather than an inclined surface. This study shed light on the effects of LDH on standing balance control and may facilitate to develop novel strategies for evaluation of LDH.
Combined cadmium-zinc interactions alter manganese, lead, copper uptake by Melissa officinalis
Authors: Adamczyk-Szabela Dorota , Lisowska Katarzyna , Romanowska-Duda Zdzisława , Wolf Wojciech M.
Published: February 2020

Farmland soil typical for the Polish rural environment was used in pot experiment to estimate the impact of cadmium and zinc on the manganese, lead and copper uptake by lemon balm (Melissa officinalis L). Bioavailable and total forms of investigated metals in soil and metal concentrations in plants were determined by atomic absorption spectrometry. The plant photosynthesis indicators were also examined. Intensification of photosynthesis upon the high zinc and cadmium soil supplementation was observed. This effect was not detected at low metal concentrations. ANOVA proved that cadmium and zinc treatments influenced manganese, lead and copper transfer from soil and their concentration in plants. Zinc uptake and accumulation in either roots or above-ground parts in plant was inversely proportional to cadmium concentration in soil. Manganese concentration in roots decreased upon the soil supplementation with either zinc or cadmium. It suggests that the latter ions are transported via symplastic pathways and compete with manganese for similar transporters. The opposite situation was observed for lead and copper. Soil supplementation with cadmium and zinc affects manganese, lead and copper concentrations and photosynthesis intensity in lemon balm plant. The following combined interactions in either normal or stress conditions are important indicators of the migration pathways.
The effect of spontaneous osteoarthritis on conditioned pain modulation in the canine model
Authors: Chiu King Wa , Hash Jon , Meyers Rachel , Lascelles B. Duncan X.
Published: February 2020

Endogenous Pain Modulation (EPM) impairment is a significant contributor to chronic pain. Conditioned pain modulation (CPM) testing assesses EPM function. Osteoarthritic (OA) dogs are good translational models, but CPM has not been explored. Our aim was to assess EPM impairment in OA dogs compared to controls using CPM. We hypothesized that CPM testing would demonstrate EPM impairment in OA dogs compared to controls. Dogs with stifle/hip OA and demographically-matched controls were recruited. The pre-conditioning test stimulus, using mechanical/thermal quantitative sensory testing (MQST or TQST), were performed at the metatarsus. A 22N blunt probe (conditioning stimulus) was applied to the contralateral antebrachium for 2 minutes, followed by MQST or TQST (post-conditioning test stimulus). The threshold changes from pre to post-conditioning (∆MQST and ∆TQST) were compared between OA and control dogs. Twenty-four client-owned dogs (OA, n = 11; controls, n = 13) were recruited. The ∆MQST(p < 0.001) and ∆TQST(p < 0.001) increased in control dogs but not OA dogs (∆MQST p = 0.65; ∆TQST p = 0.76). Both ∆MQST(p < 0.001) and ∆TQST(p < 0.001) were different between the OA and control groups. These are the first data showing that EPM impairment is associated with canine OA pain. The spontaneous OA dog model may be used to test drugs that normalize EPM function.
Between roost contact is essential for maintenance of European bat lyssavirus type-2 in Myotis daubentonii bat reservoir: ‘The Swarming Hypothesis’
Authors: Horton Daniel L. , Breed Andrew C. , Arnold Mark E. , Smith Graham C. , Aegerter James N. , McElhinney Lorraine M. , Johnson Nick , Banyard Ashley C. , Raynor Robert , Mackie Iain , Denwood Matthew J. , Mellor Dominic J. , Swift Sue , Racey Paul A. , Fooks Anthony R.
Published: February 2020

Many high-consequence human and animal pathogens persist in wildlife reservoirs. An understanding of the dynamics of these pathogens in their reservoir hosts is crucial to inform the risk of spill-over events, yet our understanding of these dynamics is frequently insufficient. Viral persistence in a wild bat population was investigated by combining empirical data and in-silico analyses to test hypotheses on mechanisms for viral persistence. A fatal zoonotic virus, European Bat lyssavirus type 2 (EBLV-2), in Daubenton’s bats (Myotis daubentonii) was used as a model system. A total of 1839 M. daubentonii were sampled for evidence of virus exposure and excretion during a prospective nine year serial cross-sectional survey. Multivariable statistical models demonstrated age-related differences in seroprevalence, with significant variation in seropositivity over time and among roosts. An Approximate Bayesian Computation approach was used to model the infection dynamics incorporating the known host ecology. The results demonstrate that EBLV-2 is endemic in the study population, and suggest that mixing between roosts during seasonal swarming events is necessary to maintain EBLV-2 in the population. These findings contribute to understanding how bat viruses can persist despite low prevalence of infection, and why infection is constrained to certain bat species in multispecies roosts and ecosystems.
Breeding Brown Pelicans Improve Foraging Performance as Energetic Needs Rise
Authors: Geary Brock , Leberg Paul L. , Purcell Kevin M. , Walter Scott T. , Karubian Jordan
Published: February 2020

Optimal foraging theory states that animals should maximize resource acquisition rates with respect to energy expenditure, which may involve alteration of strategies in response to changes in resource availability and energetic need. However, field-based studies of changes in foraging behavior at fine spatial and temporal scales are rare, particularly among species that feed on highly mobile prey across broad landscapes. To derive information on changes in foraging behavior of breeding brown pelicans (Pelecanus occidentalis) over time, we used GPS telemetry and distribution models of their dominant prey species to relate bird movements to changes in foraging habitat quality in the northern Gulf of Mexico. Over the course of each breeding season, pelican cohorts began by foraging in suboptimal habitats relative to the availability of high-quality patches, but exhibited a marked increase in foraging habitat quality over time that outpaced overall habitat improvement trends across the study site. These findings, which are consistent with adjustment of foraging patch use in response to increased energetic need, highlight the degree to which animal populations can optimize their foraging behaviors in the context of uncertain and dynamic resource availability, and provide an improved understanding of how landscape-level features can impact behavior.
Uncovering EEG Correlates of Covert Attention in Soccer Goalkeepers: Towards Innovative Sport Training Procedures
Authors: Jeunet Camille , Tonin Luca , Albert Louis , Chavarriaga Ricardo , Bideau Benoît , Argelaguet Ferran , Millán José del R. , Lécuyer Anatole , Kulpa Richard
Published: February 2020

Advances in sports sciences and neurosciences offer new opportunities to design efficient and motivating sport training tools. For instance, using NeuroFeedback (NF), athletes can learn to self-regulate specific brain rhythms and consequently improve their performances. Here, we focused on soccer goalkeepers’ Covert Visual Spatial Attention (CVSA) abilities, which are essential for these athletes to reach high performances. We looked for Electroencephalography (EEG) markers of CVSA usable for virtual reality-based NF training procedures, i.e., markers that comply with the following criteria: (1) specific to CVSA, (2) detectable in real-time and (3) related to goalkeepers’ performance/expertise. Our results revealed that the best-known EEG marker of CVSA—increased α-power ipsilateral to the attended hemi-field— was not usable since it did not comply with criteria 2 and 3. Nonetheless, we highlighted a significant positive correlation between athletes’ improvement in CVSA abilities and the increase of their α-power at rest. While the specificity of this marker remains to be demonstrated, it complied with both criteria 2 and 3. This result suggests that it may be possible to design innovative ecological training procedures for goalkeepers, for instance using a combination of NF and cognitive tasks performed in virtual reality.
Photodynamic therapy in oral lichen planus: A prospective case-controlled pilot study
Authors: Cosgarea Raluca , Pollmann Robert , Sharif Jusra , Schmidt Thomas , Stein Ronja , Bodea Aura , Auschill Thorsten , Sculean Anton , Eming Rüdiger , Greene Brandon , Hertl Michael , Arweiler Nicole
Published: February 2020

Oral lichen planus (OLP) is a common, chronic relapsing inflammatory disorder of the mucous membranes, which causes major discomfort. Current treatment includes topical/systemic glucocorticoids, immune modulators and systemic immunosuppressants, which may lead to considerable side-effects. The aim of this study was to determine the clinical and immunological efficacy of photodynamic therapy (PDT) in OLP as an alternative, easy-to-use, safe and non-invasive treatment. Twenty patients with OLP were treated with PDT in a prospective case-controlled pilot-study. PDT was performed on the most extensive oral lesion in 4 sessions (day 1, 3, 7, 14). Peripheral blood and lesional T cells were analysed before (day 1) and after PDT treatment (day 28). PDT led to a statistically significant reduction of clinical parameters (lesion size, ABSIS, Thongprasom-score) and improvement of all evaluated quality-of-life (QOL) items. The clinical improvement was accompanied by a significant decrease of the relative number of CD4+ and CD8+ T cells in mucosal OLP-lesions. Furthermore, CXCL10 plasma levels were decreased and the number of activated peripheral CD4 + CD137+ and CD8 + CD137+ T cells and IL-17-secreting T cells was diminished. PDT treatment in OLP leads to lesion reduction and improvement of QOL, and induces local and systemic anti-inflammatory effects. The study identifies PDT as a novel therapeutic option in OLP.
Obeticholic acid and INT-767 modulate collagen deposition in a NASH in vitro model
Authors: Anfuso Beatrice , Tiribelli Claudio , Adorini Luciano , Rosso Natalia
Published: February 2020

Pharmacological treatments for non-alcoholic steatohepatitis (NASH) are still unsatisfactory. Fibrosis is the most significant predictor of mortality and many anti-fibrotic agents are under evaluation. Herein, we assessed in vitro the effects of the FXR agonist obeticholic acid (OCA) and the dual FXR/TGR5 agonist INT-767 in a well-established co-culture NASH model. Co-cultures of human hepatoma and hepatic stellate (HSCs) cells were exposed to free fatty acids (FFAs) alone or in combination with OCA or INT-767. mRNA expression of HSCs activation markers and FXR engagement were evaluated at 24, 96 and 144 hours. Collagen deposition and metalloproteinase 2 and 9 (MMP2-9) activity were compared to tropifexor and selonsertib. FFAs induced collagen deposition and MMP2-9 activity reduction. Co-treatment with OCA or INT-767 did not affect ACTA2 and COL1A1 expression, but significantly reduced FXR and induced SHP expression, as expected. OCA induced a dose-dependent reduction of collagen and induced MMP2-9 activity. Similarly, INT-767 induced collagen reduction at 96 h and a slight increase in MMP2-9. Tropifexor and Selonsertib were also effective in collagen reduction but showed no modulation of MMP2-9. All tested compounds reduced collagen deposition. OCA exerted a more potent and long-lasting effect, mainly related to modulation of collagen turn-over and MMP2-9 activity.
Automated droplet reactor for the synthesis of iron oxide/gold core-shell nanoparticles
Authors: Ahrberg Christian D. , Wook Choi Ji , Geun Chung Bong
Published: February 2020

Core-shell nanoparticles are promising candidates for theranostic drugs, as they combine different intrinsic properties with a small size and large surface area. However, their controlled synthesis, or the screening and optimization of synthesis conditions are often difficult and labor intensive. Through the precise control over mass and heat transfer, and automatization possibilities, microfluidic devices could be a solution to this problem in a lab scale synthesis. Here, we demonstrate a microfluidic, capillary, droplet reactor for the multi-step synthesis of iron oxide/gold core-shell nanoparticles. Through the integration of a transmission measurement at the outlet of the reactor, synthesis results can be monitored in a real-time manner. This allowed for the implementation of an optimization algorithm. Starting from three separate initial guesses, the algorithm converged to the same synthesis conditions in less than 30 minutes for each initial guess. These conditions resulted in diameter for the iron oxide core of 5.8 ± 1.4 nm, a thickness for the gold shell of 3.5 ± 0.6 nm, and a total diameter of the core-shell particles of 13.1 ± 2.5 nm. Finally, applications of the iron oxide/gold core-shell nanoparticles were demonstrated for Surface Enhanced Raman Spectroscopy (SERS), photothermal therapy, and magnetic resonance imaging (MRI).
Effect of the time scale on the uncertainty of geometric mean concentrations of fecal indicators in creek under baseflow conditions
Authors: Jeon Dong Jin , Pachepsky Yakov , Harriger M. Dana , Zhu Rachael , Coppock Cary
Published: February 2020

Geometric mean concentrations of fecal indicator bacteria E. coli and enterococci are commonly used to evaluate the microbial quality of irrigation, recreation, and other types of waters, as well in watershed-scale microbial water quality modeling. It is not known how the uncertainty of those geometric mean concentrations depends on the time period between sampling. We analyzed data collected under baseflow conditions from three years of weekly and several daily sampling campaigns at Conococheague Creek in Pennsylvania. Standard deviations of logarithms of geometric mean concentrations were computed over weeks, months, and seasons. The increase in standard deviations from weekly to seasonal time scale was on average about 0.1 and 0.2 for log(E. coli) and log(enterococci), respectively, and in most cases was statistically significant. This may need to be accounted for when evaluating the uncertainty of measurements for modeling purposes and in risk assessment of microbial water quality.
Dissecting of the paravesical space associated with lower urinary tract dysfunction – a rat model
Authors: Lo Tsia-Shu , Lin Yi-Hao , Uy-Patrimonio Ma. Clarissa , Chu Hsiao-Chien , Hsieh Wu-Chiao , Chua Sandy
Published: February 2020

To determine the association of opening the paravesical space in relation to its occurrence of de novo SUI in an animal model. Thirty five female Sprague Dawley rats were divided into 5 groups of 7 rats each: Control group, Sham groups(F, H), and Study groups(MF, MH). Groups labeled with “F” had the paravesical space opened, “H” had tissue dissection with no opening of the space, and “M” had mesh implanted inside the vaginal wall. Urodynamic studies, immunohistochemical analysis, and western blot were done at day 40. The mean weight and age of 35 rats were 302.1 ± 25.1 grams and 12.8 ± 1.2 weeks old. No significant differences were noted among the control, Sham F, Sham H, Study MF, and Study MH on the voiding pressure and voided volume. The Sham F and Study MF (opened paravesical space) groups had significantly lower values on leak point pressures (LPP) (p = 0.026; p < 0.001) and shorter voiding intervals (p = 0.032; p = 0.005) when compared to other groups. Immunohistochemical analysis showed IL-1 and TNF-α to be intensely increased for the Study MF group (p = 0.003; p = <0.001). MMP-2 and CD 31 markers were also significantly higher in the Study MH and MF group. NGF expression was significantly increased in the Study MF and Sham F groups. Thus, opening of the paravesical space causes an increased inflammatory reaction, which leads to tissue destruction and lower urinary tract dysfunction, exemplified in the study with low leak point pressure and shortened voiding intervals.
An Improved Fabrication Technique for the 3-D Frequency Selective Surface based on Water Transfer Printing Technology
Authors: Harnois Maxime , Himdi Mohamed , Yong Wai Yan , Rahim Sharul Kamal Abdul , Tekkouk Karim , Cheval Nicolas
Published: February 2020

Manufacturing an array of high-quality metallic pattern layers on a dielectric substrate remains a major challenge in the development of flexible and 3-D frequency selective surfaces (FSS). This paper proposes an improved fabrication solution for the 3-D FSS based on water transfer printing (WTP) technology. The main advantages of the proposed solution are its ability to transform complicated 2-D planar FSS patterns into 3-D structures while improving both manufacturing quality and production costs. WTP technology makes use of water surface tension to keep the thin metallic patterns of the proposed FSS floating flat with the absence of a solid planar substrate. This feature enables these metallic FSS patterns to be transferred onto 3-D structures through a dipping process. To test the effectiveness of the proposed technique, the FSS was designed using computer simulation software Microwave Studio to obtain the numerical performance of the FSS structure. The WTP technology was then used to fabricate the proposed FSS prototype before its performance was tested experimentally. The measurement results agreed well with the numerical results, indicating the proposed manufacturing solution would support the development of complicated 3-D electronics devices, such as conformal antenna arrays and metamaterials.
Resistance to change: AMR gene dynamics on a commercial pig farm with high antimicrobial usage
Authors: Pollock Jolinda , Muwonge Adrian , Hutchings Michael R. , Mainda Geoffrey , Bronsvoort Barend M. , Gally David L. , Corbishley Alexander
Published: February 2020

Group antimicrobial administration is used to control disease in livestock, but we have little insight into how this impacts antimicrobial resistance (AMR) gene dynamics. Here, a longitudinal study was carried out during a single production cycle on a commercial pig unit with high historic and current antimicrobial usage. Quantitative PCR, 16S rRNA gene metabarcoding and shotgun metagenomic sequencing were used to track faecal AMR gene abundance and diversity and microbiome alpha diversity. Shotgun metagenomic sequencing identified 144 AMR genes in total, with higher AMR gene diversity present in young pigs compared to dry sows. Irrespective of in-feed antibiotic treatment or changes in microbiome diversity, mean AMR gene copy number was consistently high, with some AMR genes present at copy numbers comparable to the bacterial 16S rRNA gene. In conclusion, AMR gene prevalence and abundance were not influenced by antibiotic use, either during the production cycle or following whole-herd medication. The high levels of certain genes indicate they are widely disseminated throughout the microbial population, potentially aiding stability. Despite the high and relatively stable levels of resistance genes against the main antimicrobials used, these compounds continue to control production limiting diseases on this unit.
Comprehensive comparison of Yarrowia lipolytica and Pichia pastoris for production of Candida antarctica lipase B
Authors: Theron Chrispian W. , Vandermies Marie , Telek Samuel , Steels Sebastien , Fickers Patrick
Published: February 2020

The large-scale production of recombinant proteins (rProt) is becoming increasingly economically important. Among the different hosts used for rProt production, yeasts are gaining popularity. The so-called non-conventional yeasts, such as the methylotrophic Pichia pastoris and the dimorphic Yarrowia lipolytica, are popular choices due to their favorable characteristics and well-established expression systems. Nevertheless, a direct comparison of the two systems for rProt production and secretion was lacking. This study therefore aimed to directly compare Y. lipolytica and P. pastoris for the production and secretion of lipase CalB in bioreactor. Y. lipolytica produced more than double the biomass and more than 5-fold higher extracellular lipase than P. pastoris. Furthermore, maximal CalB production levels were reached by Y. lipolytica in half the cultivation time required for maximal production by P. pastoris. Conversely, P. pastoris was found to express 7-fold higher levels of CalB mRNA. Secreted enhanced green fluorescent protein –in isolation and fused to CalB– and protease inhibitor MG-132 were used in P. pastoris to further investigate the reasons behind such discrepancy. The most likely explanation was ultimately found to be protein degradation by endoplasmic reticulum-associated protein degradation preceding successful secretion. This study highlighted the multifaceted nature of rProt production, prompting a global outlook for selection of rProt production systems.