bluuebunny/crossref_metadata_2025 huggingface dataset:
An Inherent Coordination between the Leaf Size and the Hydraulic Architecture of Angiosperm Trees
Authors: Cao Xun , Li Yan , Zheng Xin-Jun , Xie Jiang-Bo , Wang Zhong-Yuan
Published: August 2022

Leaf veins are the continuation of twigs, and the hydraulic system of a leaf is part of, and the continuation of, the hydraulic architecture of a tree. Previous studies have demonstrated that the vessel diameter of the widest part at the tree base is tightly related to the total stem length of a tree. Here, we demonstrate that: the vessel diameter of the narrowest part at the distal end of the tree (the terminal twigs) is closely correlated to the leaf size for an angiosperm tree. Consequently, the basic feature of the hydraulic system of an angiosperm tree may be predicted by two simple parameters: the stem length (or tree height) and the leaf size, with the tree height predicting the size of the widest vessel at the tree base and the leaf size predicting the size of the narrowest vessel at the terminal trig. Namely, there is an inherent coordination between the leaf size and the hydraulic architecture of the angiosperm tree. As leaves are replacing themselves every year, their responses to climate are direct and immediate, while the woody part of a tree is there for years and more, and thus can only respond passively to climate change. This may cause a mismatch between the woody part and leaf part of the hydraulic system, and thus endanger the hydraulic coordination between leaves and the woody part.
Composition and Conservation Value of Epiphytic Lichen Communities on Common Ash in North-Western Alps: A First Assessment
Authors: Ongaro Silvia , Lione Guglielmo , Isocrono Deborah
Published: August 2022

In the western sector of the Alps, and particularly in the Aosta Valley, lichenological communities on broad-leaved trees have received very little attention, and information about lichen species associated with common ash (Fraxinus excelsior L.) are still scanty. Therefore, in this study, we analyzed epiphytic lichen communities of ash trees to estimate their composition, their conservation value, and their association with some key environmental variables. Our results show that lichen communities appear to be different in terms of occurrence and frequencies in different sampling sites. The tested environmental variables contribute to shape the lichen communities, which are significantly different (p < 0.05) in sites characterized by different elevation, solar radiation, and source vicinity. The conservation value of lichen species was assessed by comparing distributional data at the national and local level. Our findings show that, in the Italian Alps, ash trees represent an important substrate for locally, or even nationally, rare lichens: 14 recorded species were not previously known in the study area, and some (Lecanora impudens and Rinodina polyspora) were included in the red list of Italian epiphytic lichens.
Comprehensive Evaluation of Dust Retention and Metal Accumulation by the Leaves of Roadside Plants in Hangzhou among Seasons
Authors: Dang Ning , Zhang Handan , Li Haimei , Salam Mir Md Abdus , Chen Guangcai
Published: August 2022

The auto exhaust and dust derived from increased traffic volumes have led to an increasing level of atmospheric particulates in urban areas, which have become a primary pollutant of ambient air in urban zones. Roadside plants can effectively retain atmospheric particulates and clean the urban air via foliar capture of road dust. Five common roadside plants in Hangzhou were selected to evaluate their capacity for the retention of particulate matter (PM) and the accumulation of metals. The results showed that the PM retention capacity of the different plants varied greatly, as was the case with Loropetalum chinense var. rubrum Yieh, Osmanthus fragrans (Thunb.) Loureiro, Pittosporum tobira (Thunb.) Ait, Photinia × fraseri Dress and Cinnamomum camphora (L.) Presl. In addition, the amounts of particles retained by the plants varied among seasons, with the highest retention in winter (12.19 g·m−2) and the lowest retention in spring (6.89 g·m−2). The solids on the leaf surface were mainly irregular particles, such as mineral fragments, soot aggregates, and fly ash particles. Meanwhile, these plant species can effectively accumulate heavy metals that attached to the particles. The leaves of the five tree species had the highest amounts of copper (Cu) and the lowest amounts of cadmium (Cd). Among species, L. chinense and P. tobira had the strongest comprehensive capacity to adsorb particulate matter and heavy metals. The results shed light on the rational selection of road plants, both as ornaments and to purify air via dust suppression in subtropical zones.
Soil Moisture Control of NO Turnover and N2O Release in Nitrogen-Saturated Subtropical Forest Soils
Authors: Kang Ronghua , Behrendt Thomas , Mulder Jan , Dörsch Peter
Published: August 2022

Acid forest soils in South China experience a chronically elevated input of atmospheric nitrogen (N), turning them into hot spots for gaseous N emissions. Soil moisture is known to be a major controller for the partitioning of gaseous N loss to nitric (NO) and nitrous oxide (N2O), which may be of particular relevance in the monsoonal climate of South China. To study this partitioning in more detail, we determined gas phase kinetics of NO and N2O release during laboratory dry-out of acidic surface soils from the headwater catchment TieShanPing (TSP), situated close to Chongqing, SW China. Soils were sampled from two hydrologically distinct environments, a well-drained hill slope (HS), and a periodically flooded groundwater discharge zone (GDZ). Production and consumption of NO were studied in an automated flow-through system purged with NO-free or NO-spiked air. Production rates peaked at 21% and 18% water filled pore space (WFPS) in HS and GDZ soils, respectively, suggesting nitrification as the dominant process of NO formation in both landscape units. In HS soils, maximum production and consumption occurred at the same WFPS, whereas GDZ soils displayed maximum NO consumption at higher WFPS than maximum production, suggesting that denitrification is an important NO sink in GDZ soils. Net N2O release was largest at 100% WFPS and declined steadily during drying. Integrated over the entire range of soil moisture, potential NO-N loss outweighed potential N2O-N loss, suggesting that N-saturated, acid forest soil is an important NO source.
Biodiversity and Oenological Property Analysis of Non-Saccharomyces Yeasts Isolated from Korla Fragrant Pears (Pyrus sinkiangensis Yu)
Authors: Li Yinfeng , Huang Yuanmin , Long Hua , Yu Zhihai , Huang Mingzheng , Liu Xiaozhu
Published: August 2022

Oenological yeasts play a critical role in the winemaking process. In this study, the biodiversity of the non-Saccharomyces yeast was analyzed and monitored using high-throughput sequencing and culture-dependent approaches. Oenological and fermentation characteristics of these native yeasts were further investigated. A total of 241 fungus species and 5 species of culturable non-Saccharomyces yeasts were detected using high-throughput sequencing and culture-dependent approaches, respectively. Five strains of aroma-producing yeasts (K4, K14, K19, K21, and K26) were isolated, and their growth characteristics, carbon source utilization, hydrogen sulfide production performance, and β-glucosidase activity were different. The oenological condition tolerances of most strains were lower than that of commercial S. cerevisiae X16. The co-inoculum of these strains and S. cerevisiae X16 regulated the volatile aroma characteristics of the fermented Korla fragrant pear (KFP) fruit wine, enriching and complicating the aroma flavor. Thus, the combined inoculation of these indigenous wine yeasts and S. cerevisiae has some application potential in the production of KFP wine.
The Effect of Novel and Environmentally Friendly Foods on Consumer Attitude and Behavior: A Value-Attitude-Behavioral Model
Authors: Ma Chun-Chieh , Chang Hsiao-Ping
Published: August 2022

Extreme weather conditions have intensified due to manufactured environmental damage in recent years. To reduce the environmental impact on the Earth, many consumers seek to change their dietary patterns to protect the environment and voluntarily switch to a vegetarian diet. Past studies have found that the transition from nonvegetarian to vegetarian is not easy, but promoting the consumption of alternative foods such as plant-based meat alternatives should help consumers gradually reduce their dependence on meat during the transition period of changing their eating habits. This study was designed to apply the value-attitude-behavior model (VAB) to study the consumption attitude and behavior of novel and environmentally friendly foods such as plant-based meat alternatives, and the novelty of plant-based meat alternatives was included as an intervening variable for discussion. In this study, 376 valid questionnaires were collected from college students in Taiwan, and the recovery rate of valid questionnaires was 94%. It was found from the analysis of results that perceptions of green value and animal welfare value had a significantly positive effect on attitude, while attitude and product knowledge also had a significant positive effect on behavior; however, the novelty of plant-based meat alternatives products did not have an interference effect on the relationship between product knowledge and behavior. Based on the research findings of this study, it is suggested that when introducing plant-based meat alternatives products, food companies should not only let consumers understand that they are based on environmental friendliness and animal welfare values but also enhance the marketing and promotion of product knowledge to increase consumers’ confidence in purchasing plant-based meat alternatives and reduce their consumption concerns.
Detecting Starch-Head and Mildewed Fruit in Dried Hami Jujubes Using Visible/Near-Infrared Spectroscopy Combined with MRSA-SVM and Oversampling
Authors: Li Yujie , Ma Benxue , Hu Yating , Yu Guowei , Zhang Yuanjia
Published: August 2022

Dried Hami jujube has great commercial and nutritional value. Starch-head and mildewed fruit are defective jujubes that pose a threat to consumer health. A novel method for detecting starch-head and mildewed fruit in dried Hami jujubes with visible/near-infrared spectroscopy was proposed. For this, the diffuse reflectance spectra in the range of 400–1100 nm of dried Hami jujubes were obtained. Borderline synthetic minority oversampling technology (BL-SMOTE) was applied to solve the problem of imbalanced sample distribution, and its effectiveness was demonstrated compared to other methods. Then, the feature variables selected by competitive adaptive reweighted sampling (CARS) were used as the input to establish the support vector machine (SVM) classification model. The parameters of SVM were optimized by the modified reptile search algorithm (MRSA). In MRSA, Tent chaotic mapping and the Gaussian random walk strategy were used to improve the optimization ability of the original reptile search algorithm (RSA). The final results showed that the MRSA-SVM method combined with BL-SMOTE had the best classification performance, and the detection accuracy reached 97.22%. In addition, the recall, precision, F1 and kappa coefficient outperform other models. Furthermore, this study provided a valuable reference for the detection of defective fruit in other fruits.
Effects of Oxidation Modification by Malondialdehyde on the Structure and Functional Properties of Walnut Protein
Authors: Sun Lingge , Wu Qingzhi , Mao Xiaoying
Published: August 2022

(1) Background: The effects of protein oxidization induced by malondialdehyde (MDA), which was selected as a representative of lipid peroxidation products, on the structure and functional properties of walnut protein were investigated. (2) Methods: Walnut protein isolate was produced by alkali-soluble acid precipitation. The modification of walnut protein isolate was conducted by MDA solutions (0, 0.01, 0.1, 1, and 10 Mm), which were incubated in the dark for 24 h. (3) Results: Increased carbonyl content and the degradation of sulfhydryl groups indicated MDA-induced protein oxidization. The circular dichroism spectra revealed disruption of the ordered protein secondary structure. The change in the tertiary conformation of the MDA-treated protein was observed through intrinsic fluorescence. Small polypeptide chain scission was observed at low MDA concentrations (≤0.1 mM) and protein aggregation was observed at high MDA concentrations (>0.1 mM) using high-performance size exclusion chromatography. Oxidized protein solubility was reduced. Furthermore, the emulsification stability index, foam capacity, and foam stability of walnut proteins were increased after treatment with 0.1 mM of MDA. An excessive concentration of MDA (>0.1 mM) decreased emulsification and foaming properties. (4) Conclusions: These results show that MDA oxidation modified the structure of walnut protein and further affected its function, which should be taken into account in processing walnut protein products.
Food as Culture among African Women: Exploring Differences between North and South (Morocco-Senegal)
Authors: García-Navarro E. Begoña , Cáceres-Titos María José , Araujo-Hernández Miriam
Published: August 2022

The goal of this exploratory study was to analyze the influence of culture on African women’s diet considering their role as primary caregivers. The analysis differentiated between Moroccan and Senegalese women and identified the key elements that influence their dietary habits and their health. Using a qualitative methodology, we performed a triangulation of data based on a literature review and a panel of experts, all of which served as the basis for the interview script to conduct 14 semi-structured interviews (n = 7 Moroccan and n = 7 Senegalese). This study reflects the substantial relationship between dietary habits, cultural identity, and health that healthcare providers need to acknowledge. It is important for healthcare practitioners to be culturally competent in order to provide holistic and individualized care.
Conceptualizing a Gluten-Free Instant Noodle Prototype Using Environmental Sustainability Aspects: A Cross-National Qualitative Study on Thai and Danish Consumers
Authors: Sae-Eaw Amporn , Wongsaichia Sasichakorn , Giacalone Davide , Naruetharadhol Phaninee , Ketkaew Chavis
Published: August 2022

Gluten-free food products have been developed to satisfy the needs of consumers with celiac disease. However, there has been little research on the product feature development of sustainable gluten-free instant noodles through a qualitative study to explore the customer insights related to environmental attitude and purchase decision. Using a cross-national comparative study between Thai and Danish consumers, this study aims to (1) identify the target customer segments for each country; (2) explore the target customer segments regarding behaviours, desired outcomes, and pain points; and (3) suggest gluten-free instant noodle product prototypes suitable for each country. With a qualitative interview approach, 60 target customers (30 Thai and 30 Danish) were recruited to participate in this research. In addition, a thematic analysis was undertaken to examine their behaviours, desired outcomes, and pain points toward sustainable gluten-free instant noodle products. The findings revealed that convenience-oriented customers were the target segment of gluten-free instant noodle products in Thailand. This segment primarily focused on convenience as the main reason for consuming instant noodles and had common pain points in terms of taste. In contrast, environment-oriented customers were the target customer segment in Denmark. This segment consisted primarily of young women who eat less meat and shared common pain points such as difficulty accessing more sustainable options. Hence, there is a need to educate customers in Thailand (an emerging economy) and increase their awareness regarding environmental sustainability and consumption.
A Novel Fluorescent Aptasensor Based on Real-Time Fluorescence and Strand Displacement Amplification for the Detection of Ochratoxin A
Authors: Guo Wei , Yang Haoyu , Zhang Yunzhe , Wu Hao , Lu Xin , Tan Jianxin , Zhang Wei
Published: August 2022

It is urgently necessary to develop convenient, reliable, ultrasensitive and specific methods of ochratoxin A determination in food safety owing to its high toxicity. In the present study, an ultrasensitive and labeled-free fluorescent aptamer sensor combining real-time fluorescence with strand displacement amplification (SDA) was fabricated for the determination of OTA. In the presence of OTA, the OTA–aptamer combines with OTA, thus opening hairpins. Then, SDA primers specifically bind to the hairpin stem, which is used for subsequent amplification as a template. SDA amplification is initiated under the action of Bst DNA polymerase and nicking endonuclease. The amplified products (ssDNA) are dyed with SYBR Green II and detected with real-time fluorescence. The method has good linearity in the range of 0.01–50 ng mL−1, with the lowest limit of detection of 0.01 ng mL−1. Additionally, the fluorescent aptamer sensor shows outstanding specificity and reproducibility. Furthermore, the sensor shows excellent analytical performance in the artificial labeled detection of wheat and oat samples, with a recovery rate of 96.1~100%. The results suggest that the developed sensor has a promising potential application for the ultrasensitive detection of contaminants in food.
Detection of Nitrated, Oxygenated and Hydrogenated Polycyclic Aromatic Compounds in Smoked Fish and Meat Products
Authors: Sonego Elisa , Bhattarai Bina , Duedahl-Olesen Lene
Published: August 2022

Polycyclic aromatic hydrocarbons (PAHs) are present in smoked food products. More toxic nitrated (NPAH) and oxygenated (OPAH) PAHs derivatives are found concomitantly to PAHs and are therefore believed to be found in smoked food products. However, only a few PAH analyses on food include these derivatives. We adjusted and successfully validated a GC-QTOFMS method including 13 NPAHs and 2 OPAHs as well as the 4 regulated PAHs for analysis of 14 smoked (13 fish and one bacon) and one pan fried fish samples.OPAHs were detected in the highest concentrations in 13 of 15 samples. Non-target screening revealed the presence of an additional four OPAHs and two methylated PAHs. Future food analysis should, based on these results, focus on PAH and oxygenated derivatives.
Effect of the Application of a Green Preservative Strategy on Minced Meat Products: Antimicrobial Efficacy of Olive Mill Wastewater Polyphenolic Extract in Improving Beef Burger Shelf-Life
Authors: Roila Rossana , Sordini Beatrice , Esposto Sonia , Ranucci David , Primavilla Sara , Valiani Andrea , Taticchi Agnese , Branciari Raffaella , Servili Maurizio
Published: August 2022

The mincing process of raw meat favors microbial spoilage as well as chemical and enzymatic oxidation processes. In order to limit this degradative process, preservatives are routinely added to minced meat products. The role of olive mill wastewater polyphenolic extract as a replacement for synthetic preservatives in beef burger was assessed. The antioxidant capacity of the extract experimentally added to beef burger was evaluated using the oxygen radical absorbance capacity method (ORACFL) to assess the shelf-life, while the lipid oxidation was measured by thiobarbituric reactive substance (TBAR) determination. The antimicrobial activity was assayed by means of classical methods and predictive microbiology. The experimental addition of polyphenolic extract led to 62% lower lipid oxidation and 58% higher antioxidant capacity; it also successfully modulated spoilage microbial populations with an average growth reduction of 15% on day 7. Results indicate that olive mill wastewater polyphenolic extracts could be added to raw ground beef meat to act as natural antioxidants and to modulate microbial growth.
Identification and Characterization of Malolactic Bacteria Isolated from the Eastern Foothills of Helan Mountain in China
Authors: Sun Jingxian , Ge Yuzi , Gu Xiaobo , Li Ruyi , Ma Wen , Jin Gang
Published: August 2022

Malolactic fermentation (MLF) converts malic acid into lactic acid by lactic acid bacteria (LAB). MLF may affect potential wine quality impact as global warming intensifies, and the alcohol in the wine increases, which threatens MLF. Lactiplantibacillus plantarum is considered a new generation of MLF starter because of the ability of high ethanol tolerance and good enological characteristics. In this research, 132 LAB strains were isolated from the eastern foothills of Helan Mountain in Ningxia, China. Twenty-one higher ethanol tolerance isolates were obtained by 15% (v/v) ethanol preliminary screening. They were identified by 16S rRNA sequencing and differentiated by randomly amplified polymorphic DNA (RAPD). Stress factors include ethanol, pH, and SO2, and the combination of stresses was used to screen stress-tolerance strains. β-D-glucosidase activity, MLF performance, and biogenic amine content were tested to evaluate the enological characteristics. GC-MS detected the volatile components of the wine after MLF. The results showed that twenty strains were identified as L. plantarum, and one strain was Lentilactobacillus hilgardii. Especially, the strains of A7, A18, A23, A50, and B28 showed strong resistance to high ethanol, low pH, and high SO2. A7, A50, and B28 showed better β-D-glucosidase activity and thus were inoculated into cabernet sauvignon wines whose ethanol content was 14.75% (v/v) to proceed MLF. A7 finished MLF in 36 d, while the control strains Oenococcus oeni 31-DH and L. plantarum BV-S2 finished MLF in 24 d and 28 d, respectively. Nevertheless, A50 and B28 did not finish MLF in 36 d. The data showed that A7 brought a more volatile aroma than control. Notably, the esters and terpenes in the wine increased. These results demonstrated the potential applicability of L. plantarum A7 as a new MLF starter culture, especially for high-ethanol wines.
Radiological Features of Microvascular Invasion of Hepatocellular Carcinoma in Patients with Non-Alcoholic Fatty Liver Disease
Authors: Renzulli Matteo , Pecorelli Anna , Brandi Nicolò , Marasco Giovanni , Adduci Francesco , Tovoli Francesco , Stefanini Bernardo , Granito Alessandro , Golfieri Rita
Published: August 2022

Background: The aim of the present study was to evaluate the presence and the prognostic value of the radiological signs of microvascular invasion (MVI) of hepatocellular carcinoma (HCC) in patients with non-alcoholic fatty liver disease (NAFLD). Methods: Between January 2015 and December 2017, all patients (91 patients) with de novo HCC or HCC recurrence occurring at least 2 years after the last treatment in NAFLD (36 patients) or with hepatitis C virus (HCV) liver disease (55 patients) were included. Each HCC was treated with liver resection and transplantation to obtain the anatomopathological confirmation of MVI. All patients had at least one available computed tomography (CT) scan or magnetic resonance imaging (MRI) performed no more than one month prior to the treatment. The clinical data of each patient, tumor burden (diameter, margins, two-trait predictor of venous invasion (TTPVI), and peritumoral enhancement), the recurrence rate (RR) after a 1-year follow-up, and the time to recurrence (TTR) were collected. Results: The NAFLD–HCC nodules were larger as compared to HCV–HCC (51 mm vs. 36 mm, p = 0.004) and showed a higher prevalence of TTPVI (38.9 vs. 20.0%, p = 0.058). At multivariate analysis, nodule diameter >50 mm was found to be the only independent prognostic factor of TTPVI (hazard ratio: 21.3, 95% confidence interval: 4.2–107.7, p < 0.001), and the presence of TTPVI was confirmed to be the only independent prognostic factors of recurrence (hazard ratio: 2.349, 95% confidence interval: 1.369–4.032, p = 0.002). No correlations were found between TTR and irregular tumor margins or peritumoral enhancement. Conclusion: The NAFLD–HCC patients had larger tumors at diagnosis and showed a more frequent presence of radiological signs of MVI as compared to the HCV–HCC patients. The MVI was related to a more rapid recurrence after curative treatments, demonstrating the prognostic value of this radiological diagnosis.
Experimental Study on Matched Particle Size and Elastic Modulus of Preformed Particle Gel for Oil Reservoirs
Authors: Zhou Kang , Wu Dejun , An Zhibin
Published: August 2022

Suitable elastic modulus and particle size of preformed particle gel are the keys to both diverting water flow and avoiding permanent impairment to reservoirs. Therefore, the paper aims at finding the best matched preformed particle gel for given reservoirs using sand-pack displacement experiments. The results show that the injection pressure of preformed particle gel with excessively small size and elastic modulus is relatively low, indicating poor capacity to increase flow resistance and reduce water channeling. On the other hand, if the particle size and elastic modulus of preformed particle gel are excessively large, the reservoir may be plugged and irreversibly damaged, affecting oil development performance. In fact, the best matched particle size and elastic modulus of preformed particle gel increase with the increase in reservoir permeability. Furthermore, the paper establishes a quantitative logarithmic model between the particle size of preformed particle gel and reservoir permeability. Finally, the established matching relationship is validated via microscopic visualization oil displacement experiments using a glass etching model. The validation experiments indicate that the preformed particle gel (60–80 mesh; 2–4 Pa) selected according to the matching relationship can effectively reduce water channeling and increase sweeping efficiency by as much as 55% compared with water flooding in the glass etching model with an average permeability of 2624 × 10−3 μm2. Therefore, the established matching relationship can provide an effective guide when selecting the best suitable preformed particle gel for a given reservoir in more future applications.
Documenting Difficult Cases: A Mixed Method Analysis
Authors: Knight Thomas Daniel
Published: August 2022

This Special Issue of Genealogy examines the use of evidence, documentation, and methodology in family history and genealogical studies, and welcomes case studies that examine how to document individuals and relationships. A critical component of scholarly research focusing on the study of particular individuals or groups entails correctly identifying those individuals Historians, genealogists, historical demographers, and scholars in other disciplines sometimes undertake this sort of analysis. Often, research is uncomplicated if the research subject remained in a particular geographical area, or left a clear evidentiary trail, but what happens when historical documents do not clearly identify the research subject? Utilizing a case study approach, this essay employs four different research methods—the chronological study, family reconstitution, community study techniques, and the one-name study—to identify an individual whose correct historical identification was problematic. As such, it establishes a research strategy that can be employed in similar situations.
Unusual Presentation in WAGR Syndrome: Expanding the Phenotypic and Genotypic Spectrum of the Diseases
Authors: Wang Qiwei , Zhang Xulin , Qin Tingfeng , Wang Dongni , Lin Xiaoshan , Zhu Yuanyuan , Tan Haowen , Zhao Lanqin , Li Jing , Lin Zhuoling , Lin Haotian , Chen Weirong
Published: August 2022

The deletion of chromosome 11p13 involving the WT1 and PAX6 genes has been shown to cause WAGR syndrome (OMIM #194072), a rare genetic disorder that features Wilms’ tumor, aniridia, genitourinary anomalies, as well as mental retardation. In this study, we expand the genotypic and phenotypic spectrum of WAGR syndrome by reporting on six patients from six unrelated families with different de novo deletions located on chromosome 11p13. Very rare phenotypes of lens automated absorption and lens thinning were detected in four of the six patients. We assessed the involvement of the ARL14EP gene in patients with and without severe lens abnormalities and found that its deletion may worsen the lens abnormalities in these patients.
A DNA-Damage Inducible Gene Promotes the Formation of Antibiotic Persisters in Response to the Quorum Sensing Signaling Peptide in Streptococcus mutans
Authors: Dufour Delphine , Zhao Haowei , Gong Siew-Ging , Lévesque Céline M.
Published: August 2022

Bacteria use quorum sensing (QS) to communicate with each other via secreted small autoinducers produced by individuals. QS allows bacteria to display a unified response that benefits the species during adaptation to environment, colonization, and defense against competitors. In oral streptococci, the CSP-ComDE QS is an inducible DNA damage repair system that is pivotal for bacterial survival. In the oral pathogen Streptococcus mutans, the QS system positively influences the formation of antibiotic persisters, cells that can survive antibiotic attack by entering a non-proliferative state. We recently identified a novel gene, pep299, that is activated in the persister cell fraction induced by QS. In this study, we focused our investigation on the role of pep299, a gene encoding a bacteriocin-like peptide, in the formation of antibiotic persisters. Mutant Δ299, unable to produce Pep299, showed a dramatic reduction in the number of stress-induced persisters. Using a co-culture assay, we showed that cells overproducing pep299 induced the formation of persisters in the mutant, suggesting that Pep299 was actively secreted and detected by neighboring cells. Cells exposed to DNA damage conditions activated the gene expression of pep299. Interestingly, our results suggested that the pep299 gene was also involved in the regulation of a QS-inducible toxin–antitoxin system. Our study suggests that the pep299 gene is at the core of the triggered persistence phenotype in S. mutans, allowing cells to transition into a state of reduced metabolic activity and antibiotic tolerance.
Simulating the Commercial Implementation of Gene-Editing for Influenza A Virus Resistance in Pigs: An Economic and Genetic Analysis
Authors: Salvesen Hamish A. , Byrne Timothy J. , Whitelaw C. Bruce A. , Hely Fiona S.
Published: August 2022

The development of swine Influenza A Virus resistance along with genetic technologies could complement current control measures to help to improve animal welfare standards and the economic efficiency of pig production. We have created a simulation model to assess the genetic and economic implications of various gene-editing methods that could be implemented in a commercial, multi-tiered swine breeding system. Our results demonstrate the length of the gene-editing program was negatively associated with genetic progress in commercial pigs and that the time required to reach fixation of resistance alleles was reduced if the efficiency of gene-editing is greater. The simulations included the resistance conferred in a digenic model, the inclusion of genetic mosaicism in progeny, and the effects of selection accuracy. In all scenarios, the level of mosaicism had a greater effect on the time required to reach resistance allele fixation and the genetic progress of the herd than gene-editing efficiency and zygote survival. The economic analysis highlights that selection accuracy will not affect the duration of gene-editing and the investment required compared to the effects of gene-editing-associated mosaicism and the swine Influenza A Virus control strategy on farms. These modelling results provide novel insights into the economic and genetic implications of targeting two genes in a commercial pig gene-editing program and the effects of selection accuracy and mosaicism.
Expression and Genetic Effects of GLI Pathogenesis-Related 1 Gene on Backfat Thickness in Pigs
Authors: Liu Xin , Li Hanmei , Zhang Longchao , Wang Ligang , Wang Lixian
Published: August 2022

Backfat thickness (BFT) is an important carcass composition trait and regarded as a breeding focus. Our initial transcriptome analysis of pig BFT identified GLI pathogenesis-related 1 (GLIPR1) as one of the promising candidate genes. This study was conducted to identify the expression profiles, polymorphisms, and genetic effects of the GLIPR1 gene on BFT in pigs. The expression of the GLIPR1 gene existed in every detected tissue, and there was a significantly higher expression in spleen and adipose tissue than others (p < 0.05). At the different ages of pig, the expression of the GLIPR1 gene was low at an early age, increased with growth, and reached the highest level at 180 days. Genetic polymorphism analysis was detected in 553 individuals of the Large White × Minzhu F2 population. Four SNPs in the promoter significantly associated with 6–7 rib BFT (p < 0.05) were predicted to alter the transcription factor binding sites (TFBS), and the mutations of g.38758089 T>G and g.38758114 G>C were predicted to change the TFs associated with the regulation of adipogenesis. Haplotypes were formed by the detected SNPs, and one block showed a strong association with BFT (p < 0.05). In summary, our results indicate that the expression profiles and genetic variants of GLIPR1 affected the BFT of pigs. To our knowledge, this study is the first to demonstrate the biological function and genetic effects of the GLIPR1 gene on the BFT of pig and provide genetic markers to optimize breeding for BFT in pigs.
Fanfiction, Self-Publishing, and the Materiality of the Book: A Fan Writer’s Autoethnography
Authors: Price Ludi
Published: August 2022

This interdisciplinary paper presents an autoethnography of an author who self-publishes her own fanfiction via print-on-demand (POD) services. It reflects upon the subject of fan writer as self-publisher, touching upon shifting notions of authorship, the format of the book, and literary practice, with implications for both fan studies and Library and Information Science (LIS). While its findings cannot be generalised to the wider fan community, the paper posits five reasons for this practice: (1) the desire to publish a work that is technically, if not necessarily creatively, unpublishable (due to copyright laws); (2) the physical presence of the book bestows ‘thingness’, physical legitimacy, and the power of traditional notions of authorship to one’s work; (3) the materiality of the book and the pleasure afforded by its physical, tactile, and haptic qualities; (4) books can be collectible (fan) items; (5) self-published books can act as signifiers both of the self-as-author and one’s creative journey. The paper recommends further study be conducted on a wider scale, engaging other self-publishing fanfiction authors in their own practice to test the conclusions presented here.
Herpes Zoster Vaccination Rates in Hematological and Oncological Patients—Stock Taking 2 Years after Market Approval
Authors: Kiderlen Til Ramón , Trostdorf Katrin , Delmastro Nicola , Salomon Arne , de Wit Maike , Reinwald Mark
Published: August 2022

Background: Vaccinations have the potential to significantly lower the burden of disease for many major infections in the high-risk population of hematological and oncological patients. In this regard Shingrix®, an inactivated Varicella Zoster Virus vaccine, received market approval in the European Union in March 2018, after prior US approval in October 2017, and recommendations specifically state immunocompromised, including oncological, patients. As vaccination rates are considered to be poor in oncological patients, determining the current vaccination rates for Shingrix® two years after market approval is important in defining the need for intervention to bring this potentially high-impact vaccine to the patients. Methods: We analyzed data of the EVO Study to provide data for Herpes zoster vaccination rates in oncological patients. The EVO Study was an interventional study evaluating the potential of increasing vaccination rates of specified must-have vaccinations by an instructional card in the oncological setting. Numbers presented in this publication merged baseline data and follow-up data of the control group; hence data not affected by the intervention. Results: Data of 370 patients were analyzed; 21.1% with hematological malignancies and 78.9% with solid cancer. Only 3.0% were vaccinated with Shingrix®. Patients with hematological malignancy were more likely to be vaccinated than those with solid cancer (7.7 vs. 1.7%). Conclusion: Despite clear recommendations and a pressing need in the high-risk population of hematological and oncological patients, the vast majority of patients are still left without vaccine protection against Herpes zoster by Shingrix®.
Hyaluronic Acid: A Valid Therapeutic Option for Early Management of Genitourinary Syndrome of Menopause in Cancer Survivors?
Authors: Nappi Rossella E. , Martella Silvia , Albani Francesca , Cassani Chiara , Martini Ellis , Landoni Fabio
Published: August 2022

Genitourinary syndrome of menopause (GSM) is a chronic condition affecting a large number of women, with a major impact on their urogenital health and sexual function. It occurs at midlife because estrogen levels decline with menopause enhancing aging-related changes of the functional anatomy of the urogenital system. Unfortunately, GSM may occur early in the lifespan of women or be exacerbated following anticancer treatments, such as chemotherapy, ionizing radiation, or surgical removal of reproductive organs. Symptoms of GSM are often under-reported by women, under-estimated and under-diagnosed by health care providers (HCPs), and subsequently under-treated, despite their profound negative impact on the quality of life. The mainstay of vaginal treatments is local estrogen therapy (LET) ensuring an effective management of moderate to severe symptomatic GSM. However, LET is generally contraindicated in women with a history of hormone receptor positive cancer, due to the fear of increased recurrence or possible interference with endocrine adjuvant therapies. Among non-hormonal treatments, hyaluronic acid-based moisturizers have shown promising clinical results both in healthy women and in cancer patients or survivors. Its strong water-binding properties provide lubricating and moisturizing effects, which contribute to maintaining a proper level of hydration and viscoelasticity in several body parts, including the urinary tract and genital tissues. Hyaluronic acid-based moisturizers are effective, safe, and well tolerated; therefore, they may represent a valid option for the early management of GSM-associated symptoms in every woman with a history of cancer who is unable or unwilling to undergo hormone-based therapies. Hence, the aim of this review was to provide an overview of GSM etiology and treatment in women with natural or iatrogenic menopause, with a focus on the use of hyaluronic acid as a prophylactic treatment in the context of an integrated management protocol for cancer patients.
Interprofessional Collaborative Clinical Practice in Medicine and Pharmacy: Measure of Student Perceptions Using the SPICE-R2F Instrument to Bridge Health-Care Policy and Education in France
Authors: Piogé Alexandre , Zorek Joseph , Eickhoff Jens , Debien Blaise , Finkel Julie , Trouillard Alexandre , Poucheret Patrick
Published: August 2022

Background: Public health policies in France and the USA promote health professionals’ collaborative practices in accordance with World Health Organization recommendations emphasizing the need to promote interprofessional education and training. To optimize alignment of health-care policy and education, a scientific evidence-based approach is required. Methods: A French translation (SPICE-R2F) of the Student Perceptions of Interprofessional Clinical Education—Revised instrument, version 2 (SPICE-R2) was generated. SPICE-R2F was then completed by a multicentric cohort of French health students, and confirmatory factor analysis was utilized to evaluate the validity and reliability of this instrument based on response patterns. Results: Translation of SPICE-R2 was validated evaluating psychometric properties and conducting a confirmatory factor analysis (CFA). Adequate model fit was demonstrated using RMSEA (root mean square error of approximation) and CFI (comparative fit index) model fit criteria. Within each factor, however, low to moderate levels of reliability were observed between items. These observations diverge from other countries and highlight a potential French singularity. Conclusion: Our results suggest the need to improve interprofessional clinical practice education in France at early stages in the health-care curricula. The SPICE-R2F instrument may represent a valuable evidence-based tool to characterize perceptions of interprofessional education and training of health-care students and professionals in France.
COVID-19 Mortality and Related Comorbidities in Hospitalized Patients in Bulgaria
Authors: Dimova Rositsa , Stoyanova Rumyana , Blagoeva Vesela , Mavrov Momchil , Doykov Mladen
Published: August 2022

Until now, the COVID-19 pandemic has resulted in at least 27 million cases and over 900,000 deaths worldwide. Bulgaria is one of the countries that is the most severely affected by the COVID-19 pandemic, and the mortality rate is among the highest registered in the world. The aim of this study is to investigate and analyze mortality rates due to the fact of COVID-19 in addition to the most common related underlying medical conditions in those hospitalized to outline the factors that have an impact on the mortality rate due to the fact of COVID-19. A descriptive cross-sectional research design with a retrospective analysis was used to collect data from a total of 128,269 hospitalized patients during the period from April 2020 to November 2021. During the study period, the number of hospital admissions due to the fact of COVID-19 was 5200. The patients’ mean age was 67.34 (SD ± 19.65), and 51.7% (2689) of the patients were men. Only 10% of out of a total of 5200 patients did not test positive for COVID-19 upon admission based on the antigen or PCR test. Out of all patients, 41.5% had no underlying medical conditions upon presentation, and the remaining 58.5% had diagnosed comorbidities, varying from one to five. One-third (1470) had a lethal outcome, and the remaining 71.7% recovered from the infection and were discharged from the hospital. Based on the analysis of our results, there is definite evidence that the CFR and susceptibility to symptomatic COVID-19 were higher in the elderly, men, and patients with more comorbidities, especially chronic cardiovascular, metabolic, and respiratory disorders, as well as in those admitted to hospital within 6 h after an emergency ward visit and who had a shorter mean hospital stay.
Predictors of Workplace Substance Reuse among Patients with Alcohol or Illegal Substance Use Disorder in the Workplace
Authors: Hsu Su-Ting , Wu Hung-Chi , Chien Hui-Tzu , Li Dian-Jeng
Published: August 2022

Substance and alcohol use in the workplace have become a global health burden; however, the etiologies have seldom been explored. The aims of this study were to develop a Workplace Substance Reuse Questionnaire (WSRQ) to measure the multidimensional factors associated with the reuse of alcohol or illegal substances in the workplace. The predictors of reuse were also investigated. The WSRQs for alcohol (WSRQ-Alc) and illegal substances (WSRQ-Sub) were composed of 15 and 13 items, respectively. Factors associated with workplace substance reuse included workplace environment, workload, social interaction in the workplace and other cues. Construct validity and reliability were performed to verify the questionnaires. Multivariate linear regression was conducted to estimate the associations between the factors and WSRQ score. A total of 90 patients with substance or alcohol use disorder were recruited. The results demonstrated that the WSRQ-Alc and WSRQ-Sub had acceptable reliability, with variance of 76.4% and 75.4%, respectively. The confirmatory factor analysis fit indices also indicated the adequacy of the model. A longer duration of alcohol use (β = 0.44; p = 0.002) and higher frequencies of changing job (β = 0.32; p = 0.027) and working part time (β = 0.32; p = 0.028) were significantly associated with higher WSRQ-Alc score. Our results highlight the importance of abstinence treatment and job referral for individuals with alcohol or substance use. Further studies are warranted to help extend the applicability and generalizability of the WSRQ.
Comparative Analysis of Bacillariophyceae Chloroplast Genomes Uncovers Extensive Genome Rearrangements Associated with Speciation
Authors: Wang Yichao , Wang Jing , Chen Yang , Liu Shuya , Zhao Yongfang , Chen Nansheng
Published: August 2022

The Bacillariophyceae is a species-rich, ecologically significant class of Bacillariophyta. Despite their critical importance in marine ecosystems as primary producers and in the development of harmful algal blooms (HABs), taxonomic research on Bacillariophyceae species has been hindered because of their limited morphological features, plasticity of morphologies, and the low resolution of common molecular markers. Hence molecular markers with improved resolution are urgently needed. Organelle genomes, which can be constructed efficiently with the recent development of high throughput DNA sequencing technologies and the advancement of bioinformatics tools, have been proposed as super barcodes for their higher resolution for distinguishing different species and intra-species genomic variations. In this study, we tested the value of full-length chloroplast genomes (cpDNAs) as super barcodes for distinguishing diatom species, by constructing cpDNAs of 11 strains of the class Bacillariophyceae, including Nitzschia ovalis, Nitzschia traheaformis, Cylindrotheca spp., Psammodictyon constrictum, Bacillaria paxillifer, two strains of Haslea tsukamotoi, Haslea avium, Navicula arenaria, and Pleurosigma sp. Comparative analysis of cpDNAs revealed that cpDNAs were not only adequate for resolving different species, but also for enabling recognition of high levels of genome rearrangements between cpDNAs of different species, especially for species of the genera Nitzschia, Cylindrotheca, Navicula and Haslea. Additionally, comparative analysis suggested that the positioning of species in the genus Haslea should be transferred to the genus Navicula. Chloroplast genome-based evolutionary analysis suggested that the Bacillariophyceae species first appeared during the Cretaceous period and the diversity of species rose after the mass extinction about 65 Mya. This study highlighted the value of cpDNAs in research on the biodiversity and evolution of Bacillariophyceae species, and, with the construction of more cpDNAs representing additional genera, deeper insight into the biodiversity and evolutionary relationships of Bacillariophyceae species will be gained.
Dementia-Preventing Behavior Awareness and Uptake Rates among Japanese Women in Midlife: A Survey-Based Pilot Study
Authors: Suzuki Yukiko , Yamane Nanako , Tsukagoshi Kanto , Yamaguchi Mina , Mochizuki Hideki
Published: August 2022

Lifestyle changes may help prevent dementia. However, the perception and practice of dementia-preventing behaviors remain unclear; understanding both factors is required to help prevent dementia already at early stages. This study aimed to examine the awareness and uptake rates of dementia-preventive behaviors among community-dwelling women aged 40 to 64 years, and their associations with dementia-related anxiety. A self-administered anonymous questionnaire was distributed by mail from January to May 2020. The effective response rate was 20.4% (n = 47). Approximately 60% of the responders had dementia-related anxiety; approximately 80% wanted to prevent dementia. The participants were aware of two or more dementia-preventive behaviors; however, less than 50% of them practiced at least one behavior. The group with dementia-related anxiety was more interested in and aware of dementia prevention methods than the group without the anxiety. Women with greater dementia knowledge also knew more methods of preventing it; however, they were not necessarily implementing the recommended behaviors.