bluuebunny/crossref_metadata_2025 huggingface dataset:
How Aging Affects Insulin Resistance, Insulin Secretion, and Glucose Effectiveness in Subjects with Normal Blood Glucose and Body Weight
Authors: Huang Li-Ying , Liu Chi-Hao , Chen Fang-Yu , Kuo Chun-Heng , Pitrone Pietro , Liu Jhih-Syuan
Published: April 2023

Aim: Aging is companied by deteriorations of insulin resistance (IR) and insulin secretion. However, little is known about the roles of aging on different phases of insulin secretion (ISEC); i.e., the first- and second-phase of insulin secretion (FPIS, SPIS) and glucose effectiveness (GE).
Methods: Totally 169 individuals (43 men and 126 women) with the similar fasting plasma glucose (FPG: 90 mg/dL) and BMI (men: 23 kg/m2, women 22 kg/m2) were enrolled. IR, FPIS, SPIS, and GE were estimated using our previously developed equations shown below. Pearson correlation analysis was conducted to assess the correlations between age and four diabetes factors (DFs: IR, FPIS, SPIS and GE). The equations that are used to calculate the DF in the present study were built and published by our group.
Results: The age of the participants ranged from 18- to 78-year-old. Men had higher FPIS but lower HDL-C levels than women (2.067±0.159, 1.950±0.186 μU/min and 1.130±0.306, 1.348±0.357 mmol/dl, accordingly). The results of Pearson correlation revealed that age was negatively related to IR and GE in both genders (IR: r = -0.39, p < 0.001 for men, r = -0.24, p < 0.003 for women; GE: r = 0.66, p < 0.001 for men, r = 0.78, p < 0.001 for women). In the meanwhile, FPIS was also only found to be negatively correlated with age in female (r = -0.238, p = 0.003). But there was no different with SPIS and age in both of genders.
Conclusions: We have found that in Chinese with normal FPG level (90 mg/dl) and body mass index (men: 23 kg/m2, women: 22: kg/m2), age is negatively related to IR and GE in both genders. At the same time, only FPIS was found to be negatively related to age in women. The tightness of their relationships, from the highest to the lowest are, GE, FPIS and IR accordingly. The importance of GE should be re-evaluated. These results should be interpreted with caution because of the small sample size.
ELoran Propagation Delay Prediction Model Based on BP Neural Network for Complex Meteorological Environment
Authors: LIU Shiyao , GUO Wei , HUA Yu , KOU Wudian
Published: April 2023

The core of eLoran ground-based timing navigation system is the accurate measurement of groundwave propagation delay. However, meteorological changes will disturb the conductive characteristic factors along the groundwave propagation path, especially for complex terrestrial propagation environment, and may even lead to microsecond-level propagation delay fluctuation, seriously affecting the timing accuracy of the system. Aiming at this problem, this paper proposes a propagation delay prediction model based on Back-Propagation neural network (BPNN) for complex meteorological environment, which realizes the function of directly mapping propaga-tion delay fluctuation through meteorological factors. Firstly, the theoretical influence of meteoro-logical factors on each component of propagation delay is analyzed based on calculation parame-ters. Then, through the correlation analysis of the measured data, the complex relationship be-tween the seven main meteorological factors and the propagation delay, as well as their regional differences are demonstrated. Finally, a BPNN prediction model considering regional changes of multiple meteorological factors is proposed, and the validity of the model is verified by long-term collected data. Experimental results show that the proposed model can effectively predict the propagation delay fluctuation in the next few days, and its overall performance is significantly improved compared with the existing linear model and simple neural network model.

eLoran; meteorological factor; propagation delay prediction model; Back-Propagation neural network;
A Comprehensive Overview of Innovative Approaches to Prevent Kidney Ischemia-Reperfusion Injury: Bibliometric and In Silico Analyses
Authors: Rysmakhanov Myltykbay S. , Zare Afshin , Smagulov Aibolat S. , Abenova Nurgul A. , Mussin Nadiar M. , Sultangereyev Yerlan B. , Zhakiyev Bazylbek S. , Kuttymuratov Gani K. , Haberal Mehmet , Jafari Nazanin , Baneshi Hanieh , Bakhshalizadeh Shabnam , Mahdipour Mahdi , Rahmanifar Farhad , Tamadon Amin
Published: April 2023

Ischemia-reperfusion injury (IRI) is a complex pathophysiological process that can lead to severe and irreversible consequences, including the complete loss of renal function. While standardized strategies for preventing IRI during "back-table" and cold preservation are available, various intraoperative prevention methods have been proposed to mitigate the harmful effects of warm ischemia and reperfusion of the kidney. These methods include pharmacological agents, mechanical interventions, and surgical techniques such as renal capsulotomy, ischemic preconditioning, venous blood reperfusion, renal perfusion, and the use of tissue engineering techniques like mesenchymal stromal/stem cells and/or decellularization. In this comprehensive analysis, we provide a detailed overview of pharmacological agents and intraoperative methods and approaches for the prevention and treatment of renal IRI. We begin by discussing the mechanisms of IRI and the challenges of preventing it during surgery. Then using a bibliometric analysis and molecular docking of brand-new legends we showed eplerenone have the most binding affinity to Aldehyde dehydrogenase (AD), Estrogen receptor (ER), Klotho protein, Mineralocorticoid receptor (MR), and Toll-like receptor 4 (TLR4) for preventing IRI comparing with other available therapeutics, Benzodioxole, Hydrocortisone, Indoles, Nicotinamide adenine dinucleotide, and Niacinamide. Next, we provide a comprehensive analysis of the potential benefits and limitations of various prevention strategies, including an in-depth discussion of the mechanisms of action of pharmacological agents, mechanical interventions, and surgical techniques. Furthermore, we introduce a novel scoring system for the prevention methods of kidney IRI, which takes into account the effectiveness, feasibility, and safety of each method. We then analyze the current state of clinical research in this area and discuss the implications of these methods for future clinical practice. Overall, this article provides a valuable resource for clinicians and researchers seeking to prevent and treat renal IRI in surgical settings, and introduces a new scoring system that can be used to guide the selection of the most effective and safe prevention methods.
Sensor-Based Classification of Primary and Secondary Car Driver Activities Using Convolutional Neural Networks
Authors: Doniec Rafał , Konior Justyna , Sieciński Szymon , Piet Artur , Irshad Muhammad Tausif , Piaseczna Natalia , Hasan Md Abid , Li Frédéric , Nisar Muhammad Adeel , Grzegorzek Marcin
Published: April 2023

To drive safely, the driver must be aware of the surroundings, pay attention to the road traffic, and be ready to adapt to new circumstances. Most studies on driving safety focus on detecting anomalies in driver behavior and monitoring the cognitive capabilities of drivers. In our study, we proposed a classifier for basic activities in driving a car, based on a similar approach that could be applied to the recognition of basic activities in daily life, that is, using electrooculographic (EOG) signals and a one-dimensional convolutional neural network (1D CNN). Our classifier achieved an accuracy of 80% for the 16 primary and secondary activities. The accuracy related to primary activities in driving, including crossroad, parking, roundabout was 97.9%, 96.8%, 97.4%, and 99.5%, respectively. The F1 score for secondary driving actions (0.99) was higher than for primary driving activities (0.93–0.94). Furthermore, using the same algorithm, it was possible to distinguish four secondary activities related to activities of daily life and secondary when driving a car.
Empagliflozin Attenuates Vascular Calcification in Mice with Chronic Kidney Disease by Regulating the NFR2/HO-1 Anti-Inflammatory Pathway through AMPK Activation
Authors: Lu Chia-Wen , Lee Chung-Jen , Hsieh Yi-Jen , Hsu Bang-Gee
Published: April 2023

Vascular calcification (VC) is associated with increased cardiovascular risks in patients with chronic kidney disease (CKD). Sodium-glucose cotransporter 2 inhibitors, like empagliflozin, can improve cardiovascular and renal outcomes. We assessed the expression of Runt-related transcription factor 2 (Runx2), interleukin (IL)-1β, IL-6, AMP-activated protein kinase (AMPK), nuclear factor erythroid-2-related factor (Nrf2), and heme oxygenase 1 (HO-1) in inorganic phosphate–induced VC in mouse VSMCs to investigate the mechanisms underlying empagliflozin’s therapeutic effects. We evaluated biochemical parameters, mean artery pressure (MAP), pulse wave velocity (PWV), transcutaneous glomerular filtration rate (GFR), and histology in an in vivo mouse model with VC induced by an oral high-phosphorus diet following a 5/6 nephrectomy in ApoE−/− mice. Compared to the control group, empagliflozin-treated mice showed significant reductions in blood glucose, MAP, PWV, and calcification, as well as increased calcium and GFR levels. Empagliflozin inhibited osteogenic trans-differentiation by decreasing inflammatory cytokine expression and increasing AMPK, Nrf2, and HO-1 levels. Empagliflozin mitigates high phosphate–induced calcification in mouse VSMCs through the Nrf2/HO-1 anti-inflammatory pathway by activating AMPK. Animal experiments suggested that empagliflozin reduces VC in CKD ApoE−/− mice on a high-phosphate diet.
Xiuyan Jade Waste as Antibacterial Additives for Functional Coatings
Authors: Wang Jimei , Wang Xiaoyan , Yang Yang
Published: April 2023

Jade waste is a normal byproduct that makes up much more than the amount of jade extracted. Therefore, recycling jade waste is worth investigating from the point of view of energy conservation. Moreover, it is an environment-friendly material, which is desirable for use in building materials. In this study, Xiuyan jade waste was repurposed as antibacterial additives for building coatings. The powder waste was activated by milling and subsequent annealing. The antibacterial properties of the treated waste were mostly related to the annealing temperatures. Based on the investigations of the phase change and the release of metal ions of a series of samples and their antibacterial activities, the antibacterial mechanism of the treated samples was explored experimentally. The most applicable sample for coatings was finally chosen by considering its pH values and its antibacterial abilities. Antibacterial testing showed that the addition of treated jade waste could enhance the bacterial inhibition rate of building coatings from 60% to 99.9%.
A Novel Algebraic System in Quantum Field Theory
Authors: Alhaidari Abdulaziz , Laradji Abdallah
Published: April 2023

An algebraic system is introduced, which is very useful for doing scattering calculations in quantum field theory. It is the set of all real numbers greater than or equal to -m^2 with parity designation and a special rule for addition and subtraction, where m is the rest mass of the scattered particle
The role of Vitamin D supplementation on Airway Remodeling in Asthma: A Comprehensive Systematic Review
Authors: Salameh Laila , Mahmood Walid , Hamoudi Rifat , Almazrouei Khulood , Lochanan Mahesh , Seyhoglu Suheyl , Mahboub Bassam
Published: April 2023

Asthma is a common chronic respiratory disease that affects millions of people worldwide, and its prevalence continues to increase. Vitamin D has been proposed as a potential environmental factor in asthma pathogenesis, due to its immunomodulatory effects. This systematic review aimed to evaluate the effect of vitamin D supplementation on airway remodeling in asthma. We conducted a comprehensive search of electronic databases and identified experimental studies and randomized controlled trials that investigated the impact of vitamin D supplementation on airway remodeling in asthma. The studies included in this review suggest that vitamin D inhibits airway smooth muscle cell contraction and remodeling, reduces inflammation, and regulates collagen synthesis in the airways, and modulates the action of bronchial fibroblasts. However, one study suggests that TGF-β1 can impair vitamin D-induced and constitutive airway epithelial host defense mechanisms. Overall, vitamin D appears to influence many of the pathways central to asthma progression, indicating a promising potential in asthma management and prevenation of asthma progression.
Multimodal Deep Learning Methods to Predict Radiotherapy Structure Names using Image and Textual Data from DICOM Files
Authors: Bose Priyankar , Rana Pratip , Sleeman IV William  C. , Srinivasan Sriram , Kapoor Rishabh , Palta Jatinder , Ghosh Preetam
Published: April 2023

Physicians often label anatomical structure sets in Digital Imaging and Communications in Medicine (DICOM) images with nonstandard names. As these names vary widely, the standardization of the nonstandard names in the Organs at Risk (OARs), Planning Target Volumes (PTVs), and 'Other' organs inside the area of interest is a vital problem. Prior works considered traditional machine learning approaches on structure sets with moderate success. This paper presents integrated deep learning methods applied to structure sets by integrating the multimodal data compiled from the radiotherapy centers administered by the US Veterans Health Administration (VHA) and the Department of Radiation Oncology at Virginia Commonwealth University (VCU). The de-identified radiation oncology data collected from VHA and VCU radiotherapy centers have 16,290 prostate structures. Our method integrates the heterogeneous (textual and imaging) multimodal data with Convolutional Neural Network (CNN)-based deep learning approaches like CNN, Visual Geometry Group (VGG) network, and Residual Network (ResNet). Our model presents improved results in prostate (RT) structure name standardization. Evaluation of our methods with macro-averaged F1 Score shows that our deep learning model with single-modal textual data usually performs better than the previous studies. We also experimented with various combinations of multimodal data (masked images, masked dose) besides textual data. The models perform well on the textual data alone, while the addition of imaging data shows that deep neural networks can achieve improved performance using information present in the other modalities. Additionally, using masked images and masked doses along with text leads to an overall performance improvement with the various CNN-based architectures than using all the modalities together. Undersampling the majority class leads to further performance enhancement. The VGG network on the masked image-dose data combined with CNNs on the text data performs the best and establishes the state-of-the-art in this domain.
Production and Incorporation of Calcium Hydrolyzed Nano-particles in Alkali-Activated Mine Tailings
Authors: Perera-Mercado Yibran , Zhang Nan , Hedayat Ahmadreza , Figueroa Linda , Saucedo-Salazar Esmeralda Monserrat , Clements Cara , Bolaños Sosa Héctor Gelber , Tupa Néstor , Morales Isaac Yanqui , Canahua Loza Reynaldo Sabino
Published: April 2023

This work presents the production and incorporation of calcium hydrolyzed nano-solutions at three concentrations (1, 2, and 3 wt.%) in alkali-activated gold mine tailings (MTs) from Arequipa, Perú. A first activator solution of sodium hydroxide (NaOH) at 10M was used. The calcium hy-drolyzed nano-solutions acted as a secondary activator and as additional calcium resource for the alkali-activated materials (AAMs) based on the low-calcium gold MTs. High-resolution trans-mission electron microscopy/energy-dispersive x-ray spectroscopy (HR-TEM/EDS) analyses were carried out to characterize the morphology, size, and structures of the calcium hydrolyzed na-noparticles. Fourier transform infrared (FTIR) analyses then were used to understand the chemical bonding interactions in the calcium hydrolyzed nanoparticles and in the AAMs. Scanning electron microscopy/energy-dispersive X-ray spectroscopy (SEM/EDS) and Quantitative X-ray diffraction (QXRD) were performed to study the structural, chemical, and phase compositions of the AAMs; uniaxial compressive tests evaluated the compressive strength of the reacted AAMs; and Nitrogen adsorption-desorption analyses measured the porosity changes at nanostructure level in the AAMs. The results indicate that each increase in the concentration of the calcium hydrolyzed nano-solution had a direct/proportional effect on the mechanical properties of the AAMs samples. The AAMs with 3 wt.% calcium-hydrolyzed nano-solution had the highest compressive strength value of 15.16 MPa, which represented an increase of 62% compared to the original system without nanoparticles and aged under the same conditions of 70°C for seven days. These results provide useful information about the positive effect of calcium-hydrolyzed nanoparticles on gold MTs and their conversion into sustainable building materials through alkali activation.
Oxygen as Possible Technological Adjuvant During the Crushing and/or the Malaxation Steps for the Modulation of the Characteristics of the Virgin Olive Oil
Authors: Beltrán Maza Gabriel , Gila Beltrán Abraham M. , Herrera María Paz Aguilera , Jiménez Márquez Antonio , Sánchez-Ortiz Araceli
Published: April 2023

In commercial terms, Virgin Olive Oil (VOO) is considered an exceptional food of excellent sensory and nutritional quality, for its taste and genuine odour and, as well as for its bioactive compounds, of a great interest for the health. This quality can be affected by oxidative degradation, chemical as well as enzymatic (activity of oxidative endogenous enzymes from polyphenol oxidase and peroxidase olive fruit type), of essential components during extraction and conservation of VOO. In the bibliography, the reduction of oxygen during the malaxation process and the storage of the oil has been studied in different ways. However, research about the reduction of oxygen in the crushing of olive fruit, malaxation of the paste and/or both at the same time in “real extraction condition” is scarce. The reduction of oxygen has been compared to control conditions (concentration of atmospheric oxygen of 21%). Batches of 200 kg of olive fruit, Picual cultivar, were used and the following treatments were applied: Control (21% O2 Mill - 21% O2 Mixer), “IM-NM”: Inerted milling -Normal malaxation (6.5% O2 Mill-21% O2 Mixer), “NM-IM”: Normal milling-Inerted malaxation (21% O2 Mill-4 % O2 Mixer) and “IM-IM”: Inerted milling-Inerted malaxation (5.5% O2 Mill-10% O2 Mixer). The parameters of commercial quality covered by Regulation: free acidity, peroxide value and absorbency in ultra-violet (k 232 and k270) did not suffer any change in relationship to the control, the oils belong to the comercial category of “Extra virgin olive oil”. The phenolic compounds are involved in the distinctive bitter and purgent taste and, their healthy properties and their oxidative stability, increased with the downsizing amounts of oxygen regarding control and the IM-NM, NM-IM and IM-IM treatments with an average of 4, 10 and 20 %, respectively. By contrast, total volatile compounds decrease between a 10-20 % in all oxygen reduction treatments. The volatile compounds arising from lipoxygenase pathway, which are responsable for the green and fruity notes of VOO, also decreased their concentration with the treatments, between 15-20%. The results show how the reduction of oxygen in the milling and malaxation stages of olive fruit can modulate the content of phenols, volatile compounds, carotenoids and chlorophyll pigments of the VOO avoiding the degradation of compound with sensorial and nutritional interest.
Release of Adults and Pupae of Telenomus podisi (Hymenoptera: Scelionidae) For the Management of Euschistus heros (Hemiptera: Pentatomidae) In Soybean
Authors: Parra Letícia Martins , Pereira Nadja Nara da Silva , Hoback William Wyatt , Oliveira Regiane Cristina de
Published: April 2023

Euschistus heros (Hemiptera: Pentatomidae) is one of the main pests of soybean. Egg parasitoids such as Telenomus podisi (Hymenoptera: Scelionidae) can be highly effective in attacking E. heros eggs, preventing the establishment at levels of economic damage. This study evaluated two re-lease methods of T. podisi in soybean. The treatments compared results from release of T. podisi adults fed with honey in cardboard capsules and the release of pupae in bulk. Four aerial releas-es per area were carried out via drone (7,500 females/ha) distributed at 10 points. The population density of E. heros, productivity and reproductive aspects of soybean were evaluated. Total pop-ulation of E. heros was lower in adult release treatment and male population was lower with pupae release. Thousand grain weight had higher values in fed adults treatments compared to release of pupae and control. Number of damage grains was lower in both release treatments compared with the control area. Therefore, the use of biological control with inundative release of T. podisi, regardless of the release method, is recommended within IPM programs, supporting production parameters and benefiting the sustainability of the agroecosystem.
Renal Oxygen Demand and Nephron Function: Is Glucose a Friend or Foe?
Authors: Gronda Edoardo , Iacoviello Massimo , Palazzuoli Alberto , Benevenuto Manuela , Gabrielli Domenico , Arduini Arduino
Published: April 2023

The kidney and the heart work together in balancing the body circulation and although their physiology is based on strict inter dependence, their performance fulfills different aims. While the heart can rapidly increase its own oxygen consumption to comply with the wide changes in metabolic demand linked to body function, the kidney physiology is primarily designed to maintain a stable metabolic rate and has limited capacity to cope with any steep increase in renal metabolism. In the kidneys the glomerular population filters a large amount of blood and the tubular system has been programmed to reabsorb 99% of filtrate by reabsorbing sodium together with other filtered substances including all glucose molecules. Glucose reabsorption involves the sodium-glucose cotransporters SGLT2 and SGLT1 on the apical membrane in the proximal tubular section; it also enhances bicarbonate formation so as to preserve the acid-base balance. The complex work of reabsorption in the kidney is the main factor in renal oxygen consumption; analysis of renal glucose transport in disease states is providing better understanding of the renal physiology changes that occur when clinical conditions alter the neurohormonal response leading to an increase in glomerular filtration pressure. In this circumstance glomerular hyperfiltration occurs, imposing a higher metabolic demand on kidney physiology and causing progressive renal impairment. Albumin urination is the warning signal of renal engagement over-exertion and most frequently heralds heart failure development, regardless of disease etiology. The review analyzes the mechanisms linked to renal oxygen consumption, focusing on sodium-glucose management.
In Vitro and in vivo Experimental Approaches for Antidiabetic Activity Assessment: A Methodological Review
Authors: Gavanji Shahin , Bakhtari Azizollah , Abdel-latif Rania , Bencurova Elena , Othman Eman M.
Published: April 2023

Diabetes mellitus is a global health issue that necessitates the development of novel therapeutic approaches. Today numerous experimental methods have been used and set up to evaluate novel drugs with antidiabetic effects. In addition, several research studies have been done to induce diabetes under in vitro and in vivo conditions, but only a small number of these efforts are currently in a usable stage. This review aims to provide useful guidance for researchers who seek to evaluate the antidiabetic potential of drugs, agents, or new medications using the standard methods published by authorities and academics worldwide organizations and research centers. In this review, we collected 132 relevant articles from prominent databases such as PubMed, ScienceDirect, Scopus and others to summarize in vitro and in vivo experimental validation of antidiabetic treatment from 1943 to present.
Chemoinformatics Advances from Egypt: A Review Article
Authors: Raslan Mohamed A. , Raslan Sara A. , Shehata Eslam M. , Mahmoud Amr S. , Sabri Nagwa A.
Published: April 2023

Chemoinformatics is the combination of physical chemistry theory with computer and information science techniques "in silico techniques" to a variety of descriptive and prescriptive chemistry issues, including applications to biology, drug discovery, and related molecular areas. On the other hand, machine learning has become a vital tool for drug designers to mine chemical information from enormous compound databases in order to build medications with important biological features. In Egypt, chemoinformatics were used recently in different applications. For example; the development of new antimicrobial agents like tetracycline analog B (Iodocycline). Another area of application in bioinformatics included heart disease classification based on hybrid ensemble stacking technique. In the era of COVID-19, hybrid approach for COVID-19 detection from chest radiography was applied. Furthermore, bio/chemoinformatics methods were used to compare antimicrobial medications in order to choose an effective nose-to-brain formulation targeting meningitis infection by using differences in the drugs' primary structural, topological, and electronic characteristics. An example for this included cefotaxime and ceftriaxone that were examined at three levels: at formulation level, by comparing the loading in gelatin and tripalmitin matrices as basis for the production of nanoparticulate systems, at biopharmaceutical level, through interaction with mucin and the P-gp efflux pumps, and at therapeutic level, through studying the interaction with S. pneumoniae bacterial receptors.
Non-Commutative Logic for Collective Decision-Making with Perception Bias
Authors: Kagan Evgeny , Novoselsky Alexander , Ramon Daria , Rybalov Alexander
Published: April 2023

In the paper we suggest an implementation of the non-commutative logic and apply its operators for decision-making in the group of autonomous agents. The suggested operators extend the uninorm and absorbing norm aggregators and use an additional asymmetry parameter that defines the “level of non-commutativity”. The value of this parameter is specified using the perception bias of humans measured in the experiments. The suggested operators and decision-making method are illustrated by simulated behavior of mobile robots in the group.
Staphylococcus aureus in the Processing Environment of Cured Meat Products
Authors: Pérez-Boto David , D'Arrigo Matilde , García-Lafuente Ana , Bravo Daniel , Pérez-Baltar Aida , Gaya Pilar , Medina Margarita , Arqués Juan Luis
Published: April 2023

The presence of Staphylococcus aureus in six dry-cured meat-processing facilities was investigated. S. aureus was detected in 3.8% of surfaces from five facilities. Prevalence was clearly higher during processing (4.8%) than after cleaning and disinfection (1.4%). Thirty eight isolates were typified by PFGE and MLST. Eleven sequence types (STs) were defined by MLST. ST30 (32%) and ST12 (24%), were the most abundant. Enterotoxin genes were detected in 53% of isolates. The enterotoxin A gene (sea) was present in all ST30 isolates, seb in one ST1 isolate and sec in two ST45 isolates. Sixteen isolates harbored the enterotoxin gene cluster (egc) with four variations in the sequence. The toxic shock syndrome toxin gene (tst) was detected in 82% of isolates. Regarding the antimicrobial resistance, twelve strains were susceptible to all the antibiotics tested (31.6%). However, 15.8% were resistant to three or more antimicrobials, and therefore multidrug-resistant. Our results showed that, in general, efficient cleaning and disinfection procedures were applied. Nonetheless, the presence of S. aureus with virulence determinants and resistance to antimicrobials, and particularly multidrug resistant MRSA ST398 strains might represent a potential health hazard for consumers, even though the pathogen was not isolated from final products.
Evaluation of Sugarcane Cutting Residues for the Production of Solid Biofuel
Authors: Peña Sandra , Bermeo Denisse , Reyes Flor , Forero Camen , Velasco Francisco , Arango Eduardo
Published: April 2023

Due to pollution and environmental deterioration, man needed to find other alternatives as energy sources, including biomass. (1) Background: The present research was conducted to evaluate the sugarcane cutting residue; this type of biomass has no use and can be burned to obtain energy. (2) Methods: Through the elaboration of pellets and, in turn, reduce the environmental impact of flora and fauna in crops, for the characterization, the raw material was subjected for the first time to physical treatment such as cleaning, drying, grinding, and sieving so that have the optimal characteristics to be used in the pelleting stage. Then a proximal analysis was conducted based on the ASTM -3172-89 Standard and the determination of the calorific value using the ASTM D-240 Standard. Likewise, the pellets were analyzed in their final stage. This method analyzes the parameters of moisture content, volatile material, ashes, and fixed carbon. (3) Results: It was obtained as a result that for the raw material, the % H=3.543, %MV=86.53, %Cz=6.939, %Cf= 2.987 and Pc= 15.702 KJ/Kg; and for the elaboration of the pellets it was carried out using the mixing proportion, 53% SAR with 47% binder, this was determined using the proximal analysis and the determination of the calorific value, from which the results of % H=5,768 were obtained., %MV=82.313, %Cz=6.376, %Cf= 5.543 and Pc= 15.635 KJ/Kg. (4) Conclusions: In other words, sugarcane cutting residues meet the physicochemical properties to be used as raw material in producing solid biofuel.
Metabolic Deregulation in Pulmonary Hypertension
Authors: Mathew Rajamma , Iacobas Sanda , Huang Jing , Iacobas Dumitru Andrei
Published: April 2023

The high morbidity and mortality rate of the pulmonary arterial hypertension (PAH) is partially explained by the metabolic deregulation associated with the disease. The present study identified statistically significant increase of the glucose transporter solute carrier family 2 (Slc2a1), beta nerve growth factor (Ngf), and nuclear factor erythroid derived 2, like 2 (Nfe2l2) on three standard PAH rat models and their healthy counterpart. PAH was induced by subjecting the animals to hypoxia (HO group) or by injecting them with monocrotaline in either normal (CM) or hypoxic (HM) atmospheric conditions. The Western blot and double immunofluorescent experiments were complemented with the gene expression profiling of the animal lungs analyzed from the perspective of the Genomic Fabric Paradigm. We found substantial remodeling of the genomic fabrics of the citrate cycle, pyruvate metabolism, glycolysis/gluconeogenesis and fructose and manose pathways. According to the novel transcriptomic distance criterion, the most comprehensive measure of the transcriptomic alteration, glycolysis/gluconeogenesis was the most affected functional pathway in all three PAH models. PAH decoupled the coordinated expression of many metabolic genes and replaced Pmm2 with Pmm1 in the center of the fructose and mannose metabolism. Our data show that metabolic dysregulation is a major pathogenic factor of the PAH.
Analyzing the Time Spectrum of Supernova Neutrinos to Constrain Their Effective Mass or Lorentz Invariance Violation
Authors: Moura C. , Quintino L. , Rossi-Torres F.
Published: April 2023

We analyze the expected arrival time spectrum of supernova neutrinos using simulated luminosity and computing the expected number of events in future detectors such as the DUNE Far Detector and Hyper-Kamiokande. We develop a general method using minimum square statistics that can compute the sensitivity to any variable affecting neutrino time of flight. We apply this method in two different situations: First, we compare the time spectrum changes due to different neutrino mass values to put limits in electron (anti)neutrino effective mass. Second, we constrain Lorentz Invariance Violation through the mass scale, MQG, at which it would occur. We consider two main neutrino detection techniques: 1. DUNE-like liquid argon TPC, for which the main detection channel is νe+40Ar→e−+40K*, related to the supernova neutronization burst, and 2. HyperK-like water Cherenkov detector, for which ν¯e+p→e++n is the main detection channel. We consider a fixed supernova distance of 10 kpc and two different masses of the progenitor star: (i) 15 M⊙ with neutrino emission time up to 0.3 s and (ii) 11.2 M⊙ with neutrino emission time up to 10 s. The best mass limits at 3σ are of O(1) eV. For νe, the best limit comes from a DUNE-like detector if the mass ordering happens to be inverted. For ν¯e, the best limit comes from a HyperK-like detector. The best limit for the Lorentz Invariance Violation mass scale at 3σ level, considering superluminal or subluminal effect, is MQG≳1013 GeV (MQG≳5×105 GeV) for linear (quadratic) energy dependence.
Biopolymer-Based Nanogel Approach in Drug Delivery: Basic Concept and Current Developments
Authors: Altuntaş Ebru , Özkan Burcu , Güngör Sevgi , Özsoy Yıldız
Published: April 2023

Due to their increased surface area, extent of swelling and active substance loading capacity and flexibility, nanogels made from natural and synthetic polymers have gained significant interest in the scientific and industrial areas. Especially, customized design and implementation of non-toxic, biocompatible, and biodegradable micro/nano carriers makes their usage very feasible for a range of biomedical applications, including drug delivery, tissue engineering, and bioimaging. The design and application methodologies of nanogels have been outlined in this review. Additionally, the most recent advancements in nanogel biomedical applications have been discussed, with a particular emphasis on applications for the delivery of drugs and biomolecules.
Simple, Fast and Convenient Magnetic Bead-based Sample Preparation for Detecting Viruses via Raman-Spectroscopy
Authors: Pahlow Susanne , Richard-Lacroix Marie , Hornung Franziska , Koese-Vogel Nilay , Mayerhoefer Thomas G. , Hniopek Julian , Ryabchykov Oleg , Bocklitz Thomas , Weber Karina , Ehricht Ralf , Löffler Bettina , Deinhardt-Emmer Stefanie , Popp Juergen
Published: April 2023

We introduce a magnetic bead-based sample preparation scheme for enabling a Raman spectroscopic differentiation of severe acute respiratory syndrome coronavirus type 2 (SARS-CoV-2) positive and negative samples. The beads were functionalized with the angiotensin-converting enzyme 2 (ACE2) receptor protein, which is used as recognition element to selectively enrich SARS-CoV-2 on the surface of the magnetic beads. Subsequent Raman measurements directly enable discriminating SARS-CoV-2 positive and negative samples. The proposed approach is applicable for other virus species, too, when the specific recognition element is exchanged. Series of Raman spectra were measured on three types of samples, namely SARS-CoV-2, Influenza A H1N1 virus and a negative control. For each sample type, eight independent replicates were considered. All spectra are dominated by the magnetic bead substrate and no obvious differences between sample types are apparent. In order to address the subtle differences in the spectra, we calculated different correlation coefficients, namely the Pearson coefficient and the Normalized Cross Correlation coefficient. By comparing the correlation with the negative control differentiating between SARS-CoV-2 and Influenza A virus is possible. This study provides a first step towards the detection and potential classification of different viruses with the use of conventional Raman spectroscopy.
Copper Based Antibacterial Compounds: Potential Targeting Pathways and Current Drug Design Trends.
Authors: Orta-Rivera Aixa M. , Meléndez-Contés Yazmary , Rivera-Berríos Nataniel , Gómez-Cardona Adriana M. , Ramos-Rodríguez Andrés , Cruz-Santiago Claudia , González-Dumeng Christian , López Janangelis , Escribano Jansteven , Rivera-Otero Jared J. , Díaz-Rivera Josean , Díaz-Vélez Sebastián C. , Feliciano-Delgado Zulemaría , Tinoco Arthur D.
Published: April 2023

Classical antibacterial drugs were designed to target specific bacterial properties distinct from host human cells to maximize potency and selectivity. These designs were quite effective as they could be easily derivatized to bear next generation drugs. However, the rapid mutation of bacteria and their associated acquired drug resistance have led to the rise of highly pathogenic superbug bac-terial strains for which treatment with first line drugs is no match. More than ever, there is a dire need for antibacterial drug design that goes beyond conventional standards. Taking inspiration by the body’s innate immune response to employ its own supply of labile copper ions in a toxic attack against pathogenic bacteria, which have a very low Cu tolerance, this review article examines the feasibility of Cu-centric strategies for antibacterial preventative and therapeutic applications. Promising results are shown for the use of Cu-containing materials in the hospital setting to minimize patient bacterial infections. Studies directed at disrupting bacterial Cu regulatory pathways elucidate new drug targets that can enable toxic increase of Cu levels and perturb bac-terial dependence on iron. Likewise, Cu intracellular chelation/prochelation strategies effectively induce bacterial Cu toxicity. Cu-based small molecules and nanoparticles demonstrate the im-portance of the Cu ions in their mechanism and display potential synergism with classical drugs.
Quantitative Metabolomic Dataset of Avian Eye Lenses
Authors: Zelentsova Ekaterina A. , Mariasina Sofia S. , Yanshole Vadim V. , Yanshole Lyudmila V. , Osik Nataliya A. , Sharshov Kirill A. , Tsentalovich Yuri P.
Published: April 2023

Metabolomics is a powerful set of methods that uses analytical techniques to identify and quantify metabolites in biological samples, providing a snapshot of the metabolic state of a biological system. In medicine, metabolomics can help diagnose diseases, reveal molecular basis of a disease, and monitor treatment responses, while in agriculture, it can improve crop yields and plant breeding. However, animal metabolomics faces several challenges due to the complexity and diversity of animal metabolomes, the lack of standardized protocols, and the difficulty in interpreting metabolomic data. The current dataset includes quantitative metabolomic profiles of eye lens tissues from 26 bird species (111 specimens) that can aid researchers in developing new experiments, mathematical models, and integrations with other omics data. The dataset includes raw 1H NMR spectra, protocols for sample preparation, and data preprocessing with the final table containing information on 89 reliably identified and quantified metabolites. The dataset is quantitative, making it relevant for supplementing with new specimens or comparison groups, followed by data mining and expected new interpretations. It was obtained from bird specimens collected in compliance with ethical standards and reveals potential differences in metabolic pathways due to phylogenetic difference or environmental exposure.
Green Supply Chain Coordination with Considering Carbon Emissions and Product Green Level Dependent Demand
Authors: Li Xin , Zhu Guanlai
Published: April 2023

As traditional supply chains face increasingly severe environmental issues and countries promote green development and sustainable development policy concepts, cultivating green supply chain operation models is gradually being highly valued by current governments and enterprises. Generally speaking, the production of green products incurs higher additional costs and thus their total production costs also increase. In this work, the product green level is related to the random demand. Under the green supply chain buy-back contract with the green product R&D cost sharing between the manufacturer and the retailer, both the product green level and the order quantity need to be decided to maximize the channel profit. In order to coordinate the green supply chain, the manufacturer needs to share both the risk of good salvage and the green product R&D cost with the retailer. We find that both the wholesale price and buy-back price increase in the manufacturer’s proposition of the green product R&D cost, but decrease in emission reduction efficiency coefficient or carbon trading price. In addition, the product green level, the optimal order quantity and the channel profit increase in emission reduction efficiency coefficient, but decrease in the R&D cost coefficient of the product green level. Interestingly, we find that if the carbon trading price is low, the manufacturer will set a low product green level and the product carbon emission trading is a cost for the supply chain. The increment of the carbon trading price leads to a higher cost such that the channel profit is decreased. However, if the carbon trading price is high, the manufacturer will set a high product green level and the product carbon emission trading is a revenue for the supply chain. The increment of the carbon trading price leads to a higher revenue such that the channel profit is increased.
Metformin Therapy Changes Gut Microbiota Alpha-Diversity in COVID-19 Patients with Type 2 Diabetes: The Role of SARS-CoV-2 Variants and Antibiotic Treatment
Authors: Petakh Pavlo , Kamyshna Iryna , Oksenych Valentyn , Kainov Denis , Kamyshnyi Aleksandr
Published: April 2023

The gut microbiota plays a crucial role in maintaining host health and has a significant impact on human health and disease. In this study, we investigated the alpha diversity of gut microbiota in COVID-19 patients and analyzed the impact of COVID-19 variants, antibiotic treatment, type 2 diabetes (T2D), and metformin therapy on gut microbiota composition and diversity. We used a culture-based method to analyze the gut microbiota and calculated alpha-diversity using the Shannon H' and Simpson 1/D indices. We collected clinical data, such as length of hospital stay (LoS), C-reactive protein (CRP) levels, and neutrophil-to-lymphocyte ratio (NLR). We found that patients with T2D had significantly lower alpha-diversity than those without T2D. Antibiotic use was associated with a reduction in alpha-diversity, while metformin therapy was associated with an increase. We did not find significant differences in alpha-diversity between the Delta and Omicron groups. Length of hospital stay, CRP levels, and NLR showed weak to moderate correlations with alpha diversity. Our findings suggest that maintaining a diverse gut microbiota may benefit COVID-19 patients with T2D. Interventions aimed at preserving or restoring gut microbiota diversity, such as avoiding unnecessary antibiotic use and promoting metformin therapy, may improve patient outcomes.
Mitochondrial Function-Associated APOE Locus and its Implication in Alzheimer’s Disease and Aging
Authors: Lee Eun-Gyung , Leong Lesley , Chen Sunny , Tulloch Jessica , Yu Chang-En
Published: April 2023

The APOE locus has garnered significant clinical interest because of its association with Alzheimer's disease (AD) and longevity. This genetic association appears across multiple genes in the APOE locus. Despite the apparent differences between AD and longevity, both conditions share a commonality of aging-related changes in mitochondrial function. This commonality is likely due to accumulative biological effects, partly exerted by the APOE locus. In this study, we investigated changes in mitochondrial structure/function-related markers using oxidative stress-induced human cellular models and postmortem brains (PMBs) from individuals with AD and normal controls. Our results reveal a range of expressional alterations, either up- or down-regulated, in these genes in response to oxidative stress. In contrast, we consistently observed an upregulation of multiple APOE locus genes in all cellular models and AD PMBs. Additionally, the effects of AD status on mitochondrial DNA copy number (mtDNA CN) varied depending on APOE genotype. Our findings imply a potential coregulation of APOE locus genes, possibly occurring within the same topologically associating domain (TAD) of the 3D chromosome conformation. The coordinated expression of APOE locus genes could impact mitochondrial function, contributing to the development of AD or longevity. Our study underscores the significant role of the APOE locus in modulating mitochondrial function and provides valuable insights into the underlying mechanisms of AD and aging, emphasizing the importance of this locus in clinical research.
Neurobehavioral Effects of Fermented Rice Bran Extract in Zebrafish Larvae Model
Authors: Chae Jin sil , Kim Seong soon , Hwang Kyu-Seok , Kan Hyemin , Yang Jung Yoon , Lee Byunghoi , Shin Dae-Seop , Park ByoungHee , Bae Myung Ae
Published: April 2023

Rice bran (RB) is a promising food ingredient that can improve biological function. In this study, we investigated the effects of RB, both unfermented (RB30) and fermented (RBF30) with five different microorganisms on the neurobehavioral activity in zebrafish larvae. Analytical methods such as UV spectrum and MS scan were performed. Interestingly, niacin content, which is known to improve brain functions such as cognition and emotion, was found to be higher in RBF30 than in RB30. Furthermore, niacin content was highly increased in the RBF30-exposed fish, compared to those in control fish. Therefore, we profiled behavioral patterns and various neurochemistry in zebrafish larvae following supplementation with RBF30 as well as performed calcium imaging on Tg (huC:GAL4-VP16);(UAS:GCaMP7a) zebrafish larvae to determine the correlation of neural activity. RBF30 revealed greater stimulation of locomotor activity without negatively affecting decision-making behavior in zebrafish larvae, as compared to RB30 or niacin. Its behavioral activation is mainly linked with the elevations of neural activity and several neurochemicals such as serotonergic and dopaminergic systems that are implicated in the control of anxiety and stress. Taken together, these results suggest that RBF30 could be a food material that improve the behavioral health by modulating neural activity and brain neurochemistry.