bluuebunny/crossref_metadata_2025 huggingface dataset:
Mesothelioma Malignancy and the Microenvironment: Molecular Mechanisms
Authors: Cersosimo Francesca , Barbarino Marcella , Lonardi Silvia , Vermi William , Giordano Antonio , Bellan Cristiana , Giurisato Emanuele
Published: November 2021

Several studies have reported that cellular and soluble components of the tumor microenvironment (TME) play a key role in cancer-initiation and progression. Considering the relevance and the complexity of TME in cancer biology, recent research has focused on the investigation of the TME content, in terms of players and informational exchange. Understanding the crosstalk between tumor and non-tumor cells is crucial to design more beneficial anti-cancer therapeutic strategies. Malignant pleural mesothelioma (MPM) is a complex and heterogenous tumor mainly caused by asbestos exposure with few treatment options and low life expectancy after standard therapy. MPM leukocyte infiltration is rich in macrophages. Given the failure of macrophages to eliminate asbestos fibers, these immune cells accumulate in pleural cavity leading to the establishment of a unique inflammatory environment and to the malignant transformation of mesothelial cells. In this inflammatory landscape, stromal and immune cells play a driven role to support tumor development and progression via a bidirectional communication with tumor cells. Characterization of the MPM microenvironment (MPM-ME) may be useful to understand the complexity of mesothelioma biology, such as to identify new molecular druggable targets, with the aim to improve the outcome of the disease. In this review, we summarize the known evidence about the MPM-ME network, including its prognostic and therapeutic relevance.
Arrhythmogenic Cardiomyopathy—Further Insight into the Clinical Spectrum of Desmoplakin Disease
Authors: Simpson Joanne , Anusas Joan , Oxnard Denise , Wright Sylvia , McGowan Ruth , Coats Caroline
Published: November 2021

Arrhythmogenic cardiomyopathy is a familial heart muscle disease characterized by structural, electrical, and pathological abnormalities. Recognition of left ventricular (LV) involvement in arrhythmogenic right ventricular cardiomyopathy (ARVC) has led to the newer term of arrhythmogenic cardiomyopathy (ACM). We report on a family with autosomal dominant desmoplakin (DSP) related ACM to illustrate the broad clinical spectrum of disease. The importance of evaluation of relatives with cardiac magnetic resonance imaging and consideration of genetic testing in the absence of Task Force diagnostic criteria is discussed. The practical and ethical issues of access to the Guthrie collection for deoxyribonucleic acid (DNA) testing are considered.
Development of a Novel Microgap Reactor System for the Photocatalytic Degradation of Micropollutants from Aqueous Solutions with TiO2-Based Photocatalysts Immobilized by Spray Coating
Authors: Engelhardt Tony B. , Zhu Minrui , Heilmann Claudia , Schmitz-Stöwe Sabine , Schwarz Thomas , Stöwe Klaus
Published: November 2021

The presented investigation focuses on the development of a novel microgap reactor concept for the photocatalytic degradation of micropollutants from aqueous solutions with titanium dioxide-based catalysts immobilized by spray coating. Combinatorial experiment designs were utilized in order to study the influence of the microgap width, irradiance and catalyst layer thickness on the conversion of 17 α-ethinyl estradiol. The impact of catalyst-doping is discussed as well. Regarding conversion analyses, LC-MS/MS and GC-MS techniques were deployed, while XRD, ESEM and BET were utilized for catalyst characterization. The results show that the built-up microgap reactor system enables a conversion of 65% within a residence time of 2.7 min with UV-A irradiation and under steady flow conditions. Thus, the presented bench scale photocatalysis reactor provides promising fundamental findings for the future development of pilot scale approaches. With the deployment of industrial catalysts and base materials, microgap reactor photocatalytic degradation represents an attractive technology for large-scale application.
Upcycling Waste Plastics into Multi-Walled Carbon Nanotube Composites via NiCo2O4 Catalytic Pyrolysis
Authors: Liu Xingmin , Xie Wenjie , Widenmeyer Marc , Ding Hui , Chen Guoxing , De Carolis Dario M. , Lakus-Wollny Kerstin , Molina-Luna Leopoldo , Riedel Ralf , Weidenkaff Anke
Published: November 2021

In this work, multi-walled carbon nanotube composites (MWCNCs) were produced by catalytic pyrolysis of post-consumer plastics with aluminium oxide-supported nickel, cobalt, and their bimetallic (Ni/α–Al2O3, Co/α–Al2O3, and NiCo/α–Al2O3) oxide-based catalysts. The influence of catalyst composition and catalytic reaction temperature on the carbon yield and structure of CNCs were investigated. Different temperatures (800, 900, 950, and 1000 °C) and catalyst compositions (Ni, Co, and Ni/Co) were explored to maximize the yield of carbon deposited on the catalyst. The obtained results showed that at the same catalytic temperature (900 °C), a Ni/Co bimetallic catalyst exhibited higher carbon yield than the individual monometallic catalysts due to a better cracking capability on carbon-hydrogen bonds. With the increase of temperature, the carbon yield of the Ni/Co bimetallic catalyst increased first and then decreased. At a temperature of 950 °C, the Ni/Co bimetallic catalyst achieved its largest carbon yield, which can reach 255 mg g−1plastic. The growth of CNCs followed a “particle-wire-tube” mechanism for all studied catalysts. This work finds the potential application of complex oxide composite material catalysts for the generation of CNCs in catalytic pyrolysis of wasted plastic.
Cationic Dye Degradation and Real Textile Wastewater Treatment by Heterogeneous Photo-Fenton, Using a Novel Natural Catalyst
Authors: Ben Ayed Sirine , Azam Mohammad , Al-Resayes Saud , Ayari Fadhila , Rizzo Luigi
Published: November 2021

A photo-Fenton process using a local iron oxide as a natural catalyst was compared to Fenton and UV/H2O2 advanced oxidation processes for degrading crystal violet (CV) dye in aqueous solutions. The catalyst was characterized by transmission electron microscopy (TEM), energy dispersive X-ray microanalysis (EDX), Fourier transform infrared spectroscopy (FT-IR), Raman spectrum, X-ray diffraction (XRD), UV-vis spectroscopy, and Brunauer–Emmett–Teller (BET) analysis. The optical properties proved that the catalyst represents a good candidate for photocatalytic activity. The impact of different parameters (catalyst dose, initial CV concentration, initial H2O2 concentration, pH) on the photo-Fenton efficiency was evaluated. A photo-Fenton process operated under UVC light irradiation, at spontaneous pH, with 1.0 g/L of catalyst and 30 mg/L of H2O2 was the most effective process, resulting in 98% CV dye removal within 3 h. LC-MS and ion-chromatography techniques were used to identify demethylated organic intermediates during the process. Furthermore, a regeneration study of the catalyst showed its stability and reusability (after three treatment cycles, CV dye degradation decreased from 94% to 83%). Finally, the photo-Fenton process was tested in the treatment of real textile wastewater, and the effluent was found to be in compliance with standards for industrial wastewater disposal into sewerage.
Fractionation of Birch Wood by Integrating Alkaline-Acid Treatments and Hydrogenation in Ethanol over a Bifunctional Ruthenium Catalyst
Authors: Kuznetsov Boris N. , Baryshnikov Sergey V. , Miroshnikova Angelina V. , Kazachenko Aleksandr S. , Malyar Yuriy N. , Skripnikov Andrey M. , Taran Oxana P.
Published: November 2021

For the first time, the fractionation of birch wood into microcrystalline cellulose, xylose and methoxyphenols is suggested based on the integration of alkali-acid pretreatments and hydrogenation in ethanol over a bifunctional Ru/C catalyst. It is established that removal of hemicelluloses during pretreatments of birch wood influences the yields of the liquid, gaseous and solid products of the non-catalytic and catalytic hydrogenation of pretreated samples in ethanol at 225 °C. The bifunctional Ru/carbon catalyst affects in different ways the conversion and yields of products of hydrogenation of the initial and acid- and alkali-pretreated birch wood. The most noticeable influence is characteristic of the hydrogenation of the acid-pretreated wood, where in contrast to the non-catalytic hydrogenation, the wood conversion and the yields of liquid products increase but the yields of the solid and gaseous products decrease. GC-MS, gel permeation chromatography and elemental analysis were used for characterization of the liquid product composition. The molecular mass distribution of the liquid products of hydrogenation of the initial and pretreated wood shifts towards the low-molecular range in the presence of the catalyst. From the GC-MS data, the contents of monomer compounds, predominantly 4-propylsyringol and 4-propanolsyringol, increase in the presence of the ruthenium catalyst. The solid products of catalytic hydrogenation of the pretreated wood contain up to 95 wt% of cellulose with the structure, similar to that of microcrystalline cellulose.
The Complex Regulatory Role of Cytomegalovirus Nuclear Egress Protein pUL50 in the Production of Infectious Virus
Authors: Häge Sigrun , Büscher Nicole , Pakulska Victoria , Hahn Friedrich , Adrait Annie , Krauter Steffi , Borst Eva Maria , Schlötzer-Schrehardt Ursula , Couté Yohann , Plachter Bodo , Marschall Manfred
Published: November 2021

The regulation of the nucleocytoplasmic release of herpesviral capsids is defined by the process of nuclear egress. Due to their large size, nuclear capsids are unable to traverse via nuclear pores, so that herpesviruses evolved to develop a vesicular transport pathway mediating their transition through both leaflets of the nuclear membrane. This process involves regulatory proteins, which support the local distortion of the nuclear envelope. For human cytomegalovirus (HCMV), the nuclear egress complex (NEC) is determined by the pUL50-pUL53 core that initiates multicomponent assembly with NEC-associated proteins and capsids. Hereby, pUL50 serves as a multi-interacting determinant that recruits several viral and cellular factors by direct and indirect contacts. Recently, we generated an ORF-UL50-deleted recombinant HCMV in pUL50-complementing cells and obtained first indications of putative additional functions of pUL50. In this study, we produced purified ΔUL50 particles under both complementing (ΔUL50C) and non-complementing (ΔUL50N) conditions and performed a phenotypical characterization. Findings were as follows: (i) ΔUL50N particle preparations exhibited a clear replicative defect in qPCR-based infection kinetics compared to ΔUL50C particles; (ii) immuno-EM analysis of ΔUL50C did not reveal major changes in nuclear distribution of pUL53 and lamin A/C; (iii) mass spectrometry-based quantitative proteomics showed a large concordance of protein contents in the NIEP fractions of ΔUL50C and ΔUL50N particles, but virion fraction was close to the detection limit for ΔUL50N; (iv) confocal imaging of viral marker proteins of immediate early (IE) and later phases of ΔUL50N infection indicated a very low number of cells showing an onset of viral lytic protein expression; and, finally (v) quantitative measurements of encapsidated genomes provided evidence for a substantial reduction in the DNA contents in ΔUL50N compared to ΔUL50C particles. In summary, the results point to a complex and important regulatory role of the HCMV nuclear egress protein pUL50 in the maturation of infectious virus.
Mechanisms Driving Palmitate-Mediated Neuronal Dysregulation in the Hypothalamus
Authors: Lieu Calvin V. , Loganathan Neruja , Belsham Denise D.
Published: November 2021

The hypothalamus maintains whole-body homeostasis by integrating information from circulating hormones, nutrients and signaling molecules. Distinct neuronal subpopulations that express and secrete unique neuropeptides execute the individual functions of the hypothalamus, including, but not limited to, the regulation of energy homeostasis, reproduction and circadian rhythms. Alterations at the hypothalamic level can lead to a myriad of diseases, such as type 2 diabetes mellitus, obesity, and infertility. The excessive consumption of saturated fatty acids can induce neuroinflammation, endoplasmic reticulum stress, and resistance to peripheral signals, ultimately leading to hyperphagia, obesity, impaired reproductive function and disturbed circadian rhythms. This review focuses on the how the changes in the underlying molecular mechanisms caused by palmitate exposure, the most commonly consumed saturated fatty acid, and the potential involvement of microRNAs, a class of non-coding RNA molecules that regulate gene expression post-transcriptionally, can result in detrimental alterations in protein expression and content. Studying the involvement of microRNAs in hypothalamic function holds immense potential, as these molecular markers are quickly proving to be valuable tools in the diagnosis and treatment of metabolic disease.
With or without You: Co-Chaperones Mediate Health and Disease by Modifying Chaperone Function and Protein Triage
Authors: Altinok Selin , Sanchez-Hodge Rebekah , Stewart Mariah , Smith Kaitlan , Schisler Jonathan C.
Published: November 2021

Heat shock proteins (HSPs) are a family of molecular chaperones that regulate essential protein refolding and triage decisions to maintain protein homeostasis. Numerous co-chaperone proteins directly interact and modify the function of HSPs, and these interactions impact the outcome of protein triage, impacting everything from structural proteins to cell signaling mediators. The chaperone/co-chaperone machinery protects against various stressors to ensure cellular function in the face of stress. However, coding mutations, expression changes, and post-translational modifications of the chaperone/co-chaperone machinery can alter the cellular stress response. Importantly, these dysfunctions appear to contribute to numerous human diseases. Therapeutic targeting of chaperones is an attractive but challenging approach due to the vast functions of HSPs, likely contributing to the off-target effects of these therapies. Current efforts focus on targeting co-chaperones to develop precise treatments for numerous diseases caused by defects in protein quality control. This review focuses on the recent developments regarding selected HSP70/HSP90 co-chaperones, with a concentration on cardioprotection, neuroprotection, cancer, and autoimmune diseases. We also discuss therapeutic approaches that highlight both the utility and challenges of targeting co-chaperones.
L-Arginine Ameliorates Defective Autophagy in GM2 Gangliosidoses by mTOR Modulation
Authors: Castejón-Vega Beatriz , Rubio Alejandro , Pérez-Pulido Antonio J. , Quiles José L. , Lane Jon D. , Fernández-Domínguez Beatriz , Cachón-González María Begoña , Martín-Ruiz Carmen , Sanz Alberto , Cox Timothy M. , Alcocer-Gómez Elísabet , Cordero Mario D.
Published: November 2021

Aims: Tay–Sachs and Sandhoff diseases (GM2 gangliosidosis) are autosomal recessive disorders of lysosomal function that cause progressive neurodegeneration in infants and young children. Impaired hydrolysis catalysed by β-hexosaminidase A (HexA) leads to the accumulation of GM2 ganglioside in neuronal lysosomes. Despite the storage phenotype, the role of autophagy and its regulation by mTOR has yet to be explored in the neuropathogenesis. Accordingly, we investigated the effects on autophagy and lysosomal integrity using skin fibroblasts obtained from patients with Tay–Sachs and Sandhoff diseases. Results: Pathological autophagosomes with impaired autophagic flux, an abnormality confirmed by electron microscopy and biochemical studies revealing the accelerated release of mature cathepsins and HexA into the cytosol, indicating increased lysosomal permeability. GM2 fibroblasts showed diminished mTOR signalling with reduced basal mTOR activity. Accordingly, provision of a positive nutrient signal by L-arginine supplementation partially restored mTOR activity and ameliorated the cytopathological abnormalities. Innovation: Our data provide a novel molecular mechanism underlying GM2 gangliosidosis. Impaired autophagy caused by insufficient lysosomal function might represent a new therapeutic target for these diseases. Conclusions: We contend that the expression of autophagy/lysosome/mTOR-associated molecules may prove useful peripheral biomarkers for facile monitoring of treatment of GM2 gangliosidosis and neurodegenerative disorders that affect the lysosomal function and disrupt autophagy.
Single-Cell Transcriptomics Reveals the Expression of Aging- and Senescence-Associated Genes in Distinct Cancer Cell Populations
Authors: Saul Dominik , Kosinsky Robyn Laura
Published: November 2021

The human aging process is associated with molecular changes and cellular degeneration, resulting in a significant increase in cancer incidence with age. Despite their potential correlation, the relationship between cancer- and ageing-related transcriptional changes is largely unknown. In this study, we aimed to analyze aging-associated transcriptional patterns in publicly available bulk mRNA-seq and single-cell RNA-seq (scRNA-seq) datasets for chronic myelogenous leukemia (CML), colorectal cancer (CRC), hepatocellular carcinoma (HCC), lung cancer (LC), and pancreatic ductal adenocarcinoma (PDAC). Indeed, we detected that various aging/senescence-induced genes (ASIGs) were upregulated in malignant diseases compared to healthy control samples. To elucidate the importance of ASIGs during cell development, pseudotime analyses were performed, which revealed a late enrichment of distinct cancer-specific ASIG signatures. Notably, we were able to demonstrate that all cancer entities analyzed in this study comprised cell populations expressing ASIGs. While only minor correlations were detected between ASIGs and transcriptome-wide changes in PDAC, a high proportion of ASIGs was induced in CML, CRC, HCC, and LC samples. These unique cellular subpopulations could serve as a basis for future studies on the role of aging and senescence in human malignancies.
STK11/LKB1 Modulation of the Immune Response in Lung Cancer: From Biology to Therapeutic Impact
Authors: Pons-Tostivint Elvire , Lugat Alexandre , Fontenau Jean-François , Denis Marc Guillaume , Bennouna Jaafar
Published: November 2021

The STK11/LKB1 gene codes for liver kinase B1 (STK11/LKB1), a highly conserved serine/threonine kinase involved in many energy-related cellular processes. The canonical tumor-suppressive role for STK11/LKB1 involves the activation of AMPK-related kinases, a master regulator of cell survival during stress conditions. In pre-clinical models, inactivation of STK11/LKB1 leads to the progression of lung cancer with the acquisition of metastatic properties. Moreover, preclinical and clinical data have shown that inactivation of STK11/LKB1 is associated with an inert tumor immune microenvironment, with a reduced density of infiltrating cytotoxic CD8+ T lymphocytes, a lower expression of PD-(L)1, and a neutrophil-enriched tumor microenvironment. In this review, we first describe the biological function of STK11/LKB1 and the role of its inactivation in cancer cells. We report descriptive epidemiology, co-occurring genomic alterations, and prognostic impact for lung cancer patients. Finally, we discuss recent data based on pre-clinical models and lung cancer cohorts analyzing the results of STK11/LKB1 alterations on the immune system and response or resistance to immune checkpoint inhibitors.
The First Meta-Analysis of the M129V Single-Nucleotide Polymorphism (SNP) of the Prion Protein Gene (PRNP) with Sporadic Creutzfeldt–Jakob Disease
Authors: Kim Yong-Chan , Jeong Byung-Hoon
Published: November 2021

Prion diseases are fatal, chronic, and incurable neurodegenerative diseases caused by pathogenic forms of prion protein (PrPSc) derived from endogenous forms of prion protein (PrPC). Several case–control and genome-wide association studies have reported that the M129V polymorphism of the human prion protein gene (PRNP) is significantly associated with susceptibility to sporadic Creutzfeldt–Jakob disease (CJD). However, since some case–control studies have not shown these associations, the results remain controversial. We collected data that contain the genotype and allele frequencies of the M129V single-nucleotide polymorphism (SNP) of the PRNP gene and information on ethnic backgrounds from sporadic CJD patients. We performed a meta-analysis by collecting data from eligible studies to evaluate the association between the M129V SNP of the PRNP gene and susceptibility to sporadic CJD. We found a very strong association between the M129V SNP of the PRNP gene and susceptibility to sporadic CJD using a meta-analysis for the first time. We validated the eligibility of existing reports and found severe heterogeneity in some previous studies. We also found that the MM homozygote is a potent risk factor for sporadic CJD compared to the MV heterozygote in the heterozygote comparison model (MM vs. MV, odds ratio = 4.9611, 95% confidence interval: 3.4785; 7.0758, p < 1 × 10−10). To the best of our knowledge, this was the first meta-analysis assessment of the relationship between the M129V SNP of the PRNP gene and susceptibility to sporadic CJD.
Research Progress in the Interconversion, Turnover and Degradation of Chlorophyll
Authors: Hu Xueyun , Gu Tongyu , Khan Imran , Zada Ahmad , Jia Ting
Published: November 2021

Chlorophylls (Chls, Chl a and Chl b) are tetrapyrrole molecules essential for photosynthetic light harvesting and energy transduction in plants. Once formed, Chls are noncovalently bound to photosynthetic proteins on the thylakoid membrane. In contrast, they are dismantled from photosystems in response to environmental changes or developmental processes; thus, they undergo interconversion, turnover, and degradation. In the last twenty years, fruitful research progress has been achieved on these Chl metabolic processes. The discovery of new metabolic pathways has been accompanied by the identification of enzymes associated with biochemical steps. This article reviews recent progress in the analysis of the Chl cycle, turnover and degradation pathways and the involved enzymes. In addition, open questions regarding these pathways that require further investigation are also suggested.
Plasma Metabolomics of Intermediate and Neovascular Age-Related Macular Degeneration Patients
Authors: Mitchell Sabrina L. , Ma Chunyu , Scott William K. , Agarwal Anita , Pericak-Vance Margaret A. , Haines Jonathan L. , Jones Dean P. , Uppal Karan , Brantley Milam A.
Published: November 2021

To characterize metabolites and metabolic pathways altered in intermediate and neovascular age-related macular degeneration (IAMD and NVAMD), high resolution untargeted metabolomics was performed via liquid chromatography-mass spectrometry on plasma samples obtained from 91 IAMD patients, 100 NVAMD patients, and 195 controls. Plasma metabolite levels were compared between: AMD patients and controls, IAMD patients and controls, and NVAMD and IAMD patients. Partial least-squares discriminant analysis and linear regression were used to identify discriminatory metabolites. Pathway analysis was performed to determine metabolic pathways altered in AMD. Among the comparisons, we identified 435 unique discriminatory metabolic features. Using computational methods and tandem mass spectrometry, we identified 11 metabolic features whose molecular identities had been previously verified and confirmed the molecular identities of three additional discriminatory features. Included among the discriminatory metabolites were acylcarnitines, phospholipids, amino acids, and steroid metabolites. Pathway analysis revealed that lipid, amino acid, and vitamin metabolism pathways were altered in NVAMD, IAMD, or AMD in general, including the carnitine shuttle pathway which was significantly altered in all comparisons. Finally, few discriminatory features were identified between IAMD patients and controls, suggesting that plasma metabolic profiles of IAMD patients are more similar to controls than to NVAMD patients.
Natural Fluorite from Órgiva Deposit (Spain). A Study of Its Pozzolanic and Mechanical Properties
Authors: Martín Domingo A. , Costafreda Jorge Luis , Estévez Esteban , Presa Leticia , Calvo Alicia , Castedo Ricardo , Sanjuán Miguel Ángel , Parra José Luis , Navarro Rafael
Published: November 2021

This work presents the results of the partial substitution of Portland cement (PC) by natural fluorite (NF) and calcined fluorite (CF) in mortars, at 10%, 25% and 40%. To meet these objectives, a sample of fluorite was initially studied by XRD, SEM and Raman Spectroscopy (RS). A chemical quality analysis (CQA) and a chemical pozzolanicity test (CPT) at 8 and 15 days were carried out in a second stage to establish the pozzolanic properties of the investigated sample. Finally, a mechanical compressive strength test (MCST) at 7, 28 and 90 days was carried out on specimens made up with PC/NF and PC/CF mixes, at a ratio of 10%, 25% and 40%. XRD, SEM and RS results indicated fluorite as the major mineralogical phase. The CPT and CQA showed an increase in the pozzolanicity of the samples from 8 to 15 days. The MCST showed an increase in compressive strength from 7 to 90 days for both PC/NF and PC/CF specimens. The results obtained establish that fluorite produces positive effects in the mortar and contributes to the gain of mechanical strength over time, being a suitable material for the manufacture of cements with pozzolanic addition with a reduction of CO2 emissions, and by reducing the energy costs of production.
Thermal Stability and Radiation Tolerance of Lanthanide-Doped Cerium Oxide Nanocubes
Authors: Burns Kory , Reuel Paris C. , Guerrero Fernando , Lang Eric , Lu Ping , Aitkaliyeva Assel , Hattar Khalid , Boyle Timothy J.
Published: November 2021

The thermal and radiation stability of free-standing ceramic nanoparticles that are under consideration as potential fillers for the improved thermal and radiation stability of polymeric matrices were investigated by a set of transmission electron microscopy (TEM) studies. A series of lanthanide-doped ceria (Ln:CeOx; Ln = Nd, Er, Eu, Lu) nanocubes/nanoparticles was characterized as synthesized prior to inclusion into the polymers. The Ln:CeOx were synthesized from different solution precipitation (oleylamine (ON), hexamethylenetetramine (HMTA) and solvothermal (t-butylamine (TBA)) routes. The dopants were selected to explore the impact that the cation has on the final properties of the resultant nanoparticles. The baseline CeOx and the subsequent Ln:CeOx particles were isolated as: (i) ON-Ce (not applicable), Nd (34.2 nm), Er (27.8 nm), Eu (42.4 nm), and Lu (287.4 nm); (ii) HMTA-Ce (5.8 nm), Nd (6.6 nm), Er (370.0 nm), Eu (340.6 nm), and Lu (287.4 nm); and (iii) TBA-Ce (4.1 nm), Nd (5.0 nm), Er (3.8 nm), Eu (7.3 nm), and Lu (3.8 nm). The resulting Ln:CeOx nanomaterials were characterized using a variety of analytical tools, including: X-ray fluorescence (XRF), powder X-ray diffraction (pXRD), TEM with selected area electron diffraction (SAED), and energy dispersive X-ray spectroscopy (EDS) for nanoscale elemental mapping. From these samples, the Eu:CeOx (ON, HMTA, and TBA) series were selected for stability studies due to the uniformity of the nanocubes. Through the focus on the nanoparticle properties, the thermal and radiation stability of these nanocubes were determined through in situ TEM heating and ex situ TEM irradiation. These results were coupled with data analysis to calculate the changes in size and aerial density. The particles were generally found to exhibit strong thermal stability but underwent amorphization as a result of heavy ion irradiation at high fluences.
Discharge Energy as a Key Contributing Factor Determining Microgeometry of Aluminum Samples Created by Electrical Discharge Machining
Authors: Peta Katarzyna , Mendak Michał , Bartkowiak Tomasz
Published: November 2021

The aim of this study is first to determine the effect of the discharge energy on the surface microgeometry of aluminum samples created by electrical discharge machining (EDM). Secondly, an additional purpose is to demonstrate the differences between the geometric multiscale methods: length-, area-scale, and curvature. Eleven samples were manufactured using discharge energies ranging from 0.486 mJ to 1389.18 mJ and, subsequently, measured with focus variation microscopy. Standard ISO and multiscale parameters were calculated and used for surface discrimination and regression analysis. The results of linear, logarithmic, and exponential regression analyses revealed a strong correlation (R2 > 0.9) between the geometrical features of the surface topography and the discharge energy. The approach presented in this paper shows that it is possible to shape surface microgeometry by changing the energy of electrical discharges, and these dependencies are visible in various scales of observation. The similarities of the results produced by curvature and length-scale methods were observed, despite the significant differences in the essence of those methods.
Preparation and Characterization of Tubelike g-C3N4/Ag3PO4 Heterojunction with Enhanced Visible-Light Photocatalytic Activity
Authors: Yan Xin , Wang Yuanyuan , Kang Bingbing , Li Zhuo , Niu Yanhui
Published: November 2021

Water pollution caused by dye wastewater is a potential threat to human health. Using photocatalysis technology to deal with dye wastewater has the advantages of strong purification and no secondary pollution, so it is greatly significant to look for new visible-light photocatalysts with high photocatalytic ability for dye wastewater degradation. Semiconductor photocatalyst silver phosphate (Ag3PO4) has high quantum efficiency and photocatalytic degradation activity. However, Ag3PO4 is prone to photoelectron corrosion and becomes unstable during photocatalysis, which severely limits its application in this field. In this study, a tubelike g-C3N4/Ag3PO4 heterojunction was constructed by the chemical precipitation method. An Ag3PO4 nanoparticle was loaded onto the surface of the tubelike g-C3N4, forming close contact. The photocatalytic activity of the photocatalyst was evaluated by the degradation of RhB under visible-light irradiation. The tubelike g-C3N4/Ag3PO4-5% heterojunction exhibited optimal photocatalytic performance. In an optimal process, the degradation rate of the RhB is 90% under visible-light irradiation for 40 min. The recycling experiment showed that there was no apparent decrease in the activity of tubelike g-C3N4/Ag3PO4-5% heterojunction after five consecutive runs. A possible Z-type mechanism is proposed to explain the high activity and stability of the heterojunction.
Spark Plasma Sintering of SiAlON Ceramics Synthesized via Various Cations Charge Stabilizers and Their Effect on Thermal and Mechanical Characteristics
Authors: Falak Muhammad Zulqarnain , Ahmed Bilal Anjum , Saeed Hasan Aftab , Butt Sajid Ullah , Hakeem Abbas Saeed , Akbar Usman Ali
Published: November 2021

Oxygen-rich SiAlON ceramics doped with various nanosized metal oxide (MO) stabilizers were synthesized with a view to examine their effect on thermal and mechanical characteristics. The nanosized starting powder precursors comprising Si3N4, AlN, Al2O3, and SiO2 along with oxides of Ba, Y, Mg, La, Nd, Eu, Dy, Er, and Yb as the MO charge stabilizer were employed in developing different SiAlON samples. Ultrasonic probe sonication was utilized to develop a homogenous mixture of initial powder precursors followed by spark plasma sintering (SPS) of the samples at the low temperature of 1500 °C coupled with 30 min of isothermal treatment. Sample compositions (according to general formula of alpha SiAlON: Mm/vv+Si12−(m+n)Alm+nOnN16−n) selected in the present study are represented by m value of 1.1 and n value of 1.6. The synthesized samples were evaluated for their physical behavior, microstructural and crystal structure evolution, and thermal and mechanical characteristics. More specifically, the sintered ceramics were examined by X-ray diffraction and electron microscopy to comprehend and relate the structural characteristics with the densification, thermal conductivity, hardness, and fracture toughness. The high reactivity of the nanopowders and the localized heating provided by SPS resulted in densified ceramics with relative densities in the range of 92–96%. Vickers hardness values were found to be in the range of 12.4–17.0 GPa and were seen to be profoundly influenced by the grain size of the alpha SiAlON (primary) phase. The fracture toughness of the samples was measured to be in the range of 4.1–6.2 MPa·m1/2. SiAlON samples synthesized using Er and Yb charge stabilizers were found to have the highest fracture toughness of 5.7 and 6.2 MPa·m1/2, primarily due to the relatively higher content of the elongated beta phase. While there was no obvious relationship between the thermal conductivity and the alpha SiAlON metal charge stabilizers, the values were seen to be influenced by the grain size of alpha phase where Dy-SiAlON had the lowest thermal conductivity of 5.79 W/m⋅K and Er-SiAlON showed the highest value of thermal conductivity (6.91 W/m⋅K). It was concluded that scientifically selected metal oxide charge stabilizers are beneficial in developing SiAlON ceramics with properties tailored according to specific applications.
Synthesis of Heterostructure of ZnO@MOF-46(Zn) to Improve the Photocatalytic Performance in Methylene Blue Degradation
Authors: Buasakun Jiraporn , Srilaoong Phakinee , Rattanakam Ramida , Duangthongyou Tanwawan
Published: November 2021

The heterostructure of ZnO and MOF-46(Zn) was synthesized to improve the photocatalytic performance of ZnO and prove the synergistic theory that presented the coexistence of ZnO and MOF-46(Zn), providing better efficiency than pure ZnO. The heterostructure material was synthesized by using prepared ZnO as a Zn2+ source, which was reacted with 2-aminoterephthalic acid (2-ATP) as a ligand to cover the surface of ZnO with MOF-46(Zn). The ZnO reactant materials were modified by pyrolysis of various morphologies of IRMOF-3 (Zn-MOF) prepared by using CTAB as a morphology controller. The octahedral ZnO obtained at 150 mg of CTAB shows better efficiency for photodegradation, with 85.79% within 3 h and a band gap energy of 3.11 eV. It acts as a starting material for synthesis of ZnO@MOF-46(Zn). The ZnO/MOF-46(Zn) composite was further used as a photocatalyst material in the dye (methylene blue: MB) degradation process, and the performance was compared with that of pure prepared ZnO. The results show that the photocatalytic efficiency with 61.20% in the MB degradation of the heterostructure is higher than that of pure ZnO within 60 min (90.09% within 180 min). The reason for this result may be that the coexistence of ZnO and MOF-46(Zn) can absorb a larger range of energy and reduce the possibility of the electron–hole recombination process.
Are Tree Seed Systems for Forest Landscape Restoration Fit for Purpose? An Analysis of Four Asian Countries
Authors: Bosshard Ennia , Jalonen Riina , Kanchanarak Tania , Yuskianti Vivi , Tolentino Enrique , Warrier Rekha R. , Krishnan Smitha , Dzulkifli Dzaeman , Thomas Evert , Atkinson Rachel , Kettle Chris J.
Published: November 2021

High-quality, suitably adapted tree seed at volume is a key component for the implementation and long-term success of forest landscape restoration (FLR). We analysed the tree seed systems in four Asian countries—the Philippines, Indonesia, Malaysia and India—which have committed to restore in total over 47.5 million hectares of degraded lands by 2030. We assessed the national seed systems using an established indicator framework, literature review and expert surveys and interviews. Additionally, we surveyed 61 FLR practitioners about their challenges in acquiring seed to understand how the strengths and weaknesses identified at the national level were reflected in FLR projects on the ground. Identified key constraints common to the studied countries are (i) a mismatch between the growing demand for priority native species and the limited seed supply in terms of quantity and quality, (ii) lack of effective quality control for seed of native species and (iii) lack of information about the effects of climate change on native species to guide species selection and seed sourcing and to improve the resilience of restored ecosystems. We discuss options to strengthen seed systems for native tree species both in terms of quality and volume to enable them to effectively respond to the national FLR commitments and make recommendations on promising technical solutions.
A Forest Pool as a Habitat Island for Mites in a Limestone Forest in Southern Norway
Authors: Seniczak Anna , Seniczak Stanisław , Graczyk Radomir , Kaczmarek Sławomir , Jordal Bjarte H. , Kowalski Jarosław , Djursvoll Per , Roth Steffen , Bolger Thomas
Published: November 2021

Forest water bodies, e.g., pools, constitute ‘environmental islands’ within forests, with specific flora and fauna thus contributing considerably to the landscape biodiversity. The mite communities of Oribatida and Mesostigmata in two distinctive microhabitats, water-soaked Sphagnum mosses at the edge of a pool and other mosses growing on the medium-wet forest floor nearby, were compared in a limestone forest in Southern Norway. In total, 16,189 specimens of Oribatida representing 98 species, and 499 specimens of Mesostigmata, from 23 species, were found. The abundance and species number of Oribatida were significantly lower at the pool, while the abundance and species richness of Mesostigmata did not differ. Both the communities of Oribatida and of Mesostigmata differed among the microhabitats studied and analysis showed significant differences between the community structures in the two microhabitats. The most abundant oribatid species in Sphagnum mosses was Parachipteria fanzagoi (Jacot, 1929), which made up over 30% of all Oribatida, followed by Atropacarus striculus (C.L. Koch, 1835) and Tyrphonothrus maior (Berlese, 1910) (14% and 12% of Oribatida, respectively). Among Mesostigmata Paragamasus parrunciger (Bhattacharyya, 1963) dominated (44% of Mesostigmata), followed by P. lapponicus (Trägårdh, 1910) (14% of Mesostigmata). Most of these species, except P. lapponicus, were either absent or very uncommon in the other microhabitat studied. The specific acarofauna of the forest pool shows the importance of such microhabitats in increasing forest diversity. In addition, a quarter of the mite species found had not been reported from Norwegian broadleaf forests before, including five new species records for Norway and four new to Fennoscandia, all found in the medium-wet microhabitat. Most of these species are rarely collected and have their northernmost occurrence in the studied forest.
Regional Variation in Dengue Virus Serotypes in Sri Lanka and Its Clinical and Epidemiological Relevance
Authors: Jayadas Tibutius T. P. , Kumanan Thirunavukarasu , Gomes Laksiri , Jeewandara Chandima , Malavige Gathsaurie N. , Ranasinghe Diyanath , Jadi Ramesh S. , Ramasamy Ranjan , Surendran Sinnathamby N.
Published: November 2021

Dengue is a significant health concern in Sri Lanka, but diagnosis of the infecting dengue virus (DENV) serotype has hitherto been largely restricted to the Colombo district in the western province. Salinity tolerant Aedes vectors are present in the island’s northern Jaffna peninsula, which is undergoing rapid groundwater salinization. Virus serotypes were determined by RT-qPCR in 107 and 112 patients diagnosed by NS1 antigen positivity from the Jaffna district in 2018 and 2019, respectively, and related to clinical characteristics. DENV1 and DENV2 were the most common serotypes in both years. Infections with multiple serotypes were not detected. DENV1 was significantly more prevalent in 2019 than 2018, while DENV3 was significantly more prevalent in 2018 than 2019 among the Jaffna patients. Limited genomic sequencing identified DENV1 genotype-I and DENV3 genotype-I in Jaffna patients in 2018. Dengue was more prevalent in working age persons and males among the serotyped Jaffna patients. DENV1 and DENV2 were the predominant serotypes in 2019 in the Colombo district. However, DENV1 and DENV3 were significantly more prevalent in Colombo compared with Jaffna in 2019. The differences in the prevalence of DENV1 and DENV3 between the Jaffna and Colombo districts in 2019 have implications for dengue epidemiology and vaccination. Salinity-tolerant Aedes vector strains, widespread in the Jaffna peninsula, may have contributed to differences in serotype prevalence compared with the Colombo district in 2019. Significant associations were not identified between virus serotypes and clinical characteristics among Jaffna patients.
Next-Generation Sequencing Whole-Genome Analysis for Targeted Treatment Approach of Metastatic Bartholin Gland Adenocarcinoma: An Emblematic Case Report and Review of the Literature
Authors: Macciò Antonio , Donisi Clelia , Sanna Elisabetta , Chiappe Giacomo , Nemolato Sonia , Melis Luca , Oppi Sara , Mola Brunella , Madeddu Clelia
Published: November 2021

Bartholin gland adenocarcinoma (BGA) is extremely rare and is characterized by high rates of lymph-node recurrence and distant metastases. No effective palliative treatments are available for metastatic BGA; therefore, advanced BGA remains a challenge for gynecologic oncologists. Considering the rarity of this disease and the lack of a standardized approach, the present study aims to discuss the available literature on current therapies for BGA and to describe an emblematic case treated with a novel tailored approach. A postmenopausal woman with advanced BGA was referred to our department for an adequate evaluation, staging and treatment. Notably, we used PET/CT as a fundamental imaging technique for staging and follow-up. The patient underwent primary surgery followed by standard chemotherapy and pelvic radiotherapy. Three months later, she relapsed, with the appearance of multiple metastatic sites. Considering the evident chemoresistance to standard chemotherapy and the absence of valid therapeutic alternatives for this rare cancer, she was treated with a combination of repeated minimally invasive surgical procedures for all the resectable metastatic lesions and innovative approaches comprising, firstly, chemoimmunotherapy with Nivolumab combined with metronomic vinorelbine, which resulted in a clinical response for approximately 7 months. Upon disease progression, we used a targeted systemic approach based on the whole genomic profile of the primary tumor, which showed PTEN loss, which is predictive of a benefit from an mTOR inhibitor, and a CCND1 amplification, which predicts sensitivity to CDK4/6 inhibitors. Therefore, she received Everolimus, resulting in a significant metabolic response that lasted 12 months. Thereafter, upon further progression of the disease, the patient started Palbociclib treatment, which is currently ongoing, with evidence of a metabolic response. The patient has survived for 54 months from diagnosis, with a good performance status. In conclusion, the present paper confirms the lack of efficacy of conventional therapeutic regimens in the context of advanced, recurrent or metastatic adenocarcinomas of the Bartholin gland. The case report shows how a personalized multidisciplinary approach based on repeated minimally invasive surgery and tailored anticancer treatment based on whole-genome sequencing analysis could be effective and associated with prolonged survival in this rare gynecological cancer.
Radiomics Analysis of Multi-Phase DCE-MRI in Predicting Tumor Response to Neoadjuvant Therapy in Breast Cancer
Authors: Peng Shuyi , Chen Leqing , Tao Juan , Liu Jie , Zhu Wenying , Liu Huan , Yang Fan
Published: November 2021

Objective: To explore whether the pretreatment dynamic contrast enhancement magnetic resonance imaging (DCE-MRI) and radiomics signatures were associated with pathologic complete response (pCR) to neoadjuvant therapy (NAT) in breast cancer. Method: A retrospective review of 70 patients with breast invasive carcinomas proved by biopsy between June 2017 and October 2020 (26 patients were pathological complete response, and 44 patients were non-pathological complete response). Within the pre-contrast and five post-contrast dynamic series, a total of 1037 quantitative imaging features were extracted from in each phase. Additionally, the Δfeatures (the difference between the features before and after the comparison) were used for subsequent analysis. The least absolute shrinkage and selection operator (LASSO) regression method was used to select features related to pCR, and then use these features to train multiple machine learning classifiers to predict the probability of pCR for a given patient. The area under the curve (AUC), accuracy, sensitivity, and specificity were calculated to assess the predictive performances of the radiomics model for each of the five phases of time points. Result: Among the five phases, each individual phase performed with AUCs ranging from 0.845 to 0.919 in predicting pCR. The best single phases performance was given by the 3rd phase (AUC = 0.919, sensitivity 0.885, specificity 0.864). 5 of the features have significant differences between pCR and non-pCR groups in each phase, most features reach their maximum or minimum in the 2nd or 3rd phase. Conclusion: The radiomic features extracted from each phase of pre-treatment DCE-MRI possess discriminatory power to predict tumor response.
Urinary SARS-CoV-2 RNA Is an Indicator for the Progression and Prognosis of COVID-19
Authors: Zhang Lu , Tian Maoqing , Song Yuan , Liang Wei , Li Xiaogang , Tong Yongqing , Wang Huiming
Published: November 2021

Background: We aimed to analyze clinical characteristics and find potential factors to predict poor prognosis in patients with coronavirus disease 2019 (COVID-19). Methods: We analyzed the clinical characteristics and laboratory tests of COVID-19 patients and detected SARS-CoV-2 RNA in urine sediments collected from 53 COVID-19 patients enrolled in Renmin Hospital of Wuhan University from 31 January 2020 to 18 February 2020 with qRT-PCR analysis. Then, we classified those patients based on clinical conditions (severe or non-severe syndrome) and urinary SARS-CoV-2 RNA (URNA− or URNA+). Results: We found that COVID-19 patients with severe syndrome (severe patients) showed significantly higher positive rate (11 of 23, 47.8%) of urinary SARS-CoV-2 RNA than non-severe patients (4 of 30, 13.3%, p = 0.006). URNA+ patients or severe URNA+ subgroup exhibited higher prevalence of inflammation and immune discord, cardiovascular diseases, liver damage and renal dysfunction, and higher risk of death than URNA− patients. To understand the potential mechanisms underlying the viral urine shedding, we performed renal histopathological analysis on postmortems of patients with COVID-19 and found severe renal vascular endothelium lesion characterized by an increase of the expression of thrombomodulin and von Willebrand factor, markers to assess the endothelium dysfunction. We proposed a theoretical and mathematic model to depict the potential factors that determine the urine shedding of SARS-CoV-2. Conclusions: This study indicated that urinary SARS-CoV-2 RNA detected in urine specimens can be used to predict the progression and prognosis of COVID-19 severity.