bluuebunny/crossref_metadata_2025 huggingface dataset:
Global biogeography of microbes driving ocean ecological status under climate change
Authors: Zhang Zhenyan , Zhang Qi , Chen Bingfeng , Yu Yitian , Wang Tingzhang , Xu Nuohan , Fan Xiaoji , Penuelas Josep , Fu Zhengwei , Deng Ye , Zhu Yong-Guan , Qian Haifeng
Published: May 2024

Microbial communities play a crucial role in ocean ecology and global biogeochemical processes. However, understanding the intricate interactions among diversity, taxonomical composition, functional traits, and how these factors respond to climate change remains a significant challenge. Here, we propose seven distinct ecological statuses by systematically considering the diversity, structure, and biogeochemical potential of the ocean microbiome to delineate their biogeography. Anthropogenic climate change is expected to alter the ecological status of the surface ocean by influencing environmental conditions, particularly nutrient and oxygen contents. Our predictive model, which utilizes machine learning, indicates that the ecological status of approximately 32.44% of the surface ocean may undergo changes from the present to the end of this century, assuming no policy interventions. These changes mainly include poleward shifts in the main taxa, increases in photosynthetic carbon fixation and decreases in nutrient metabolism. However, this proportion can decrease significantly with effective control of greenhouse gas emissions. Our study underscores the urgent necessity for implementing policies to mitigate climate change, particularly from an ecological perspective.
High-performance near-infrared OLEDs maximized at 925 nm and 1022 nm through interfacial energy transfer
Authors: Hung Chieh-Ming , Wang Sheng-Fu , Chao Wei-Chih , Li Jian-Liang , Chen Bo-Han , Lu Chih-Hsuan , Tu Kai-Yen , Yang Shang-Da , Hung Wen-Yi , Chi Yun , Chou Pi-Tai
Published: May 2024

Using a transfer printing technique, we imprint a layer of a designated near-infrared fluorescent dye BTP-eC9 onto a thin layer of Pt(II) complex, both of which are capable of self-assembly. Before integration, the Pt(II) complex layer gives intense deep-red phosphorescence maximized at ~740 nm, while the BTP-eC9 layer shows fluorescence at > 900 nm. Organic light emitting diodes fabricated under the imprinted bilayer architecture harvest most of Pt(II) complex phosphorescence, which undergoes triplet-to-singlet energy transfer to the BTP-eC9 dye, resulting in high-intensity hyperfluorescence at > 900 nm. As a result, devices achieve 925 nm emission with external quantum efficiencies of 2.24% (1.94 ± 0.18%) and maximum radiance of 39.97 W sr−1 m−2. Comprehensive morphology, spectroscopy and device analyses support the mechanism of interfacial energy transfer, which also is proved successful for BTPV-eC9 dye (1022 nm), making bright and far-reaching the prospective of hyperfluorescent OLEDs in the near-infrared region.
True random number generation using the spin crossover in LaCoO3
Authors: Woo Kyung Seok , Zhang Alan , Arabelo Allison , Brown Timothy D. , Park Minseong , Talin A. Alec , Fuller Elliot J. , Bisht Ravindra Singh , Qian Xiaofeng , Arroyave Raymundo , Ramanathan Shriram , Thomas Luke , Williams R. Stanley , Kumar Suhas
Published: May 2024

While digital computers rely on software-generated pseudo-random number generators, hardware-based true random number generators (TRNGs), which employ the natural physics of the underlying hardware, provide true stochasticity, and power and area efficiency. Research into TRNGs has extensively relied on the unpredictability in phase transitions, but such phase transitions are difficult to control given their often abrupt and narrow parameter ranges (e.g., occurring in a small temperature window). Here we demonstrate a TRNG based on self-oscillations in LaCoO3 that is electrically biased within its spin crossover regime. The LaCoO3 TRNG passes all standard tests of true stochasticity and uses only half the number of components compared to prior TRNGs. Assisted by phase field modeling, we show how spin crossovers are fundamentally better in producing true stochasticity compared to traditional phase transitions. As a validation, by probabilistically solving the NP-hard max-cut problem in a memristor crossbar array using our TRNG as a source of the required stochasticity, we demonstrate solution quality exceeding that using software-generated randomness.
Neoantigen-augmented iPSC cancer vaccine combined with radiotherapy promotes antitumor immunity in poorly immunogenic cancers
Authors: Huang Kevin Chih-Yang , Chen William Tzu-Liang , Chen Jia-Yi , Lee Chien-Yueh , Wu Chia-Hsin , Lai Chia-Ying , Yang Pei-Chen , Liang Ji-An , Shiau An‑Cheng , Chao K. S. Clifford , Ke Tao-Wei
Published: May 2024

Although irradiated induced-pluripotent stem cells (iPSCs) as a prophylactic cancer vaccine elicit an antitumor immune response, the therapeutic efficacy of iPSC-based cancer vaccines is not promising due to their insufficient antigenicity and the immunosuppressive tumor microenvironment. Here, we found that neoantigen-engineered iPSC cancer vaccines can trigger neoantigen-specific T cell responses to eradicate cancer cells and increase the therapeutic efficacy of RT in poorly immunogenic colorectal cancer (CRC) and triple-negative breast cancer (TNBC). We generated neoantigen-augmented iPSCs (NA-iPSCs) by engineering AAV2 vector carrying murine neoantigens and evaluated their therapeutic efficacy in combination with radiotherapy. After administration of NA-iPSC cancer vaccine and radiotherapy, we found that ~60% of tumor-bearing mice achieved a complete response in microsatellite-stable CRC model. Furthermore, splenocytes from mice treated with NA-iPSC plus RT produced high levels of IFNγ secretion in response to neoantigens and had a greater cytotoxicity to cancer cells, suggesting that the NA-iPSC vaccine combined with radiotherapy elicited a superior neoantigen-specific T-cell response to eradicate cancer cells. The superior therapeutic efficacy of NA-iPSCs engineered by mouse TNBC neoantigens was also observed in the syngeneic immunocompetent TNBC mouse model. We found that the risk of spontaneous lung and liver metastasis was dramatically decreased by NA-iPSCs plus RT in the TNBC animal model. Altogether, these results indicated that autologous iPSC cancer vaccines engineered by neoantigens can elicit a high neoantigen-specific T-cell response, promote tumor regression, and reduce the risk of distant metastasis in combination with local radiotherapy.
Nanoparticle display of neuraminidase elicits enhanced antibody responses and protection against influenza A virus challenge
Authors: Pascha M. N. , Ballegeer M. , Roelofs M. C. , Meuris L. , Albulescu I. C. , van Kuppeveld F. J. M. , Hurdiss D. L. , Bosch B. J. , Zeev-Ben-Mordehai T. , Saelens X. , de Haan C. A. M.
Published: May 2024

Current Influenza virus vaccines primarily induce antibody responses against variable epitopes in hemagglutinin (HA), necessitating frequent updates. However, antibodies against neuraminidase (NA) can also confer protection against influenza, making NA an attractive target for the development of novel vaccines. In this study, we aimed to enhance the immunogenicity of recombinant NA antigens by presenting them multivalently on a nanoparticle carrier. Soluble tetrameric NA antigens of the N1 and N2 subtypes, confirmed to be correctly folded by cryo-electron microscopy structural analysis, were conjugated to Mi3 self-assembling protein nanoparticles using the SpyTag-SpyCatcher system. Immunization of mice with NA-Mi3 nanoparticles induced higher titers of NA-binding and -inhibiting antibodies and improved protection against a lethal challenge compared to unconjugated NA. Additionally, we explored the co-presentation of N1 and N2 antigens on the same Mi3 particles to create a mosaic vaccine candidate. These mosaic nanoparticles elicited antibody titers that were similar or superior to the homotypic nanoparticles and effectively protected against H1N1 and H3N2 challenge viruses. The NA-Mi3 nanoparticles represent a promising vaccine candidate that could complement HA-directed approaches for enhanced potency and broadened protection against influenza A virus.
Precipitation data in Seoul, Korea during 1778–1907
Authors: Lee Jae-Won , Shin Ho-Jeong , Hong Jinkyu
Published: May 2024

Precipitation plays a crucial role in the global energy and water cycle and has important implications for food, water, and energy security. To enhance our understanding of the water cycle, it is invaluable to have a comprehensive historical record of precipitation. However, obtaining such records, especially for the period before the Industrial Revolution, can be challenging. During the Joseon Dynasty, Korea established a network for measuring rainfall and recorded this information in historical documents known as Seungjeongwon Ilgi and Ilseongnok. Recently, these documents have been digitized, providing us with daily precipitation data for Seoul spanning 130 years, from 1778 to 1907. By combining and analyzing these two documents, we were able to address inconsistencies found in previous studies and improve the quality of the data. Notably, this dataset is free of any missing values, making it the longest daily precipitation record in the world before the Industrial Revolution. Its availability to the public holds great potential for climate research in East Asia during the late Little Ice Age.
Observational evidence of the association between physical and psychological determinants of aging with cognition in older adults
Authors: Martins Valéria Feijó , Peyré-Tartaruga Leonardo Alexandre , Haas Aline Nogueira , Kanitz Ana Carolina , Martinez Flávia Gomes , Gonçalves Andréa Kruger
Published: May 2024

Aging involves physical and cognitive deterioration in older adults. Detecting predictors of dementia early is crucial to identify its onset. This study aimed to associate physical and psychological determinants with cognitive performance in older adults. Observational study with 221 older adults, classified according to cognitive impairment. We evaluated cognitive function by Mini-Mental State Examination. Physical determinants encompassed muscle strength, functional mobility, and cardiorespiratory fitness, while psychological consisted of quality of life and activities of daily living. Multiple linear regression was performed to investigate this relationship. Physical and psychological determinants were significantly linked to cognitive impairment, including lower muscle strength, reduced functional mobility and of cardiorespiratory fitness. The influence of environment, autonomy, and engagement in daily activities on cognitive impairment was also observed. The analysis of physical and psychological determinants could help to aid in distinguishing individuals with cognitive impairment.
Harnessing the power of native biocontrol agents against wilt disease of Pigeonpea incited by Fusarium udum
Authors: Reddy B. Deepak , Kumar Birendra , Sahni Sangita , Yashaswini G. , Karthik Somala , Reddy M. S. Sai , Kumar Rajeev , Mukherjee U. , Krishna K. Sai
Published: May 2024

Fusarium wilt, caused by (Fusarium udum Butler), is a significant threat to pigeonpea crops worldwide, leading to substantial yield losses. Traditional approaches like fungicides and resistant cultivars are not practical due to the persistent and evolving nature of the pathogen. Therefore, native biocontrol agents are considered to be more sustainable solution, as they adapt well to local soil and climatic conditions. In this study, five isolates of F. udum infecting pigeonpea were isolated from various cultivars and characterized morphologically and molecularly. The isolate from the ICP 8858 cultivar displayed the highest virulence of 90%. Besides, 100 endophytic bacteria, 100 rhizosphere bacteria and three Trichoderma spp. were isolated and tested against F. udum isolated from ICP 8858 under in vitro conditions. Out of the 200 bacteria tested, nine showed highest inhibition, including Rb-4 (Bacillus sp.), Rb-11 (B. subtilis), Rb-14 (B. megaterium), Rb-18 (B. subtilis), Rb-19 (B. velezensis), Eb-8 (Bacillus sp.), Eb-11 (B. subtilis), Eb-13 (P. aeruginosa), and Eb-21 (P. aeruginosa). Similarly, Trichoderma spp. were identified as T. harzianum, T. asperellum and Trichoderma sp. Notably, Rb-18 (B. subtilis) and Eb-21 (P. aeruginosa) exhibited promising characteristics such as the production of hydrogen cyanide (HCN), cellulase, siderophores, ammonia and nutrient solubilization. Furthermore, treating pigeonpea seedlings with these beneficial microorganisms led to increased levels of key enzymes (POD, PPO, and PAL) associated with resistance to Fusarium wilt, compared to untreated controls. In field trials conducted for four seasons, the application of these potential biocontrol agents as seed treatments on the susceptible ICP2376 cultivar led to the lowest disease incidence. Specifically, treatments T2 (33.33) (P. aeruginosa) and T3 (35.41) (T. harzianium) exhibited the lowest disease incidence, followed by T6 (36.5) (Carbendizim), T1 (36.66) (B. subtilis), T4 (52.91) (T. asperellum) and T5 (53.33) (Trichoderma sp.). Results of this study revealed that, P. aeruginosa (Eb-21), B. subtilis (Rb-18) and T. harzianum can be used for plant growth promotion and management of Fusarium wilt of pigeonpea.
Physiological mechanisms behind respiratory variations in right atrial pressure in pulmonary hypertension
Authors: Yogeswaran Athiththan , da Rocha Bruno Brito , Rako Zvonimir A. , Kaufmann Samuel J. , Schäfer Simon , Kremer Nils , Ghofrani Hossein Ardeschir , Seeger Werner , Tello Khodr
Published: May 2024

Impaired respiratory variation of right atrial pressure (RAP) in severe pulmonary hypertension (PH) suggests difficulty tolerating increased preload during inspiration. Our study explores whether this impairment links to specific factors: right ventricular (RV) diastolic function, elevated RV afterload, systolic RV function, or RV-pulmonary arterial (PA) coupling. We retrospectively evaluated respiratory RAP variation in all participants enrolled in the EXERTION study. Impaired respiratory variation was defined as end-expiratory RAP − end-inspiratory RAP ≤ 2 mm Hg. RV function and afterload were evaluated using conductance catheterization. Impaired diastolic RV function was defined as end-diastolic elastance (Eed) ≥ median (0.19 mm Hg/mL). Seventy-five patients were included; PH was diagnosed in 57 patients and invasively excluded in 18 patients. Of the 75 patients, 31 (41%) had impaired RAP variation, which was linked with impaired RV systolic function and RV-PA coupling and increased tricuspid regurgitation and Eed as compared to patients with preserved RAP variation. In backward regression, RAP variation associated only with Eed. RAP variation but not simple RAP identified impaired diastolic RV function (area under the receiver operating characteristic curve [95% confidence interval]: 0.712 [0.592, 0.832] and 0.496 [0.358, 0.634], respectively). During exercise, patients with impaired RAP variation experienced greater RV dilatation and reduced diastolic reserve and cardiac output/index compared with patients with preserved RAP variation. Preserved RAP variation was associated with a better prognosis than impaired RAP variation based on the 2022 European Society of Cardiology/European Respiratory Society risk score (chi-square P = 0.025) and survival free from clinical worsening (91% vs 71% at 1 year and 79% vs 50% at 2 years [log-rank P = 0.020]; hazard ratio: 0.397 [95% confidence interval: 0.178, 0.884]). Subgroup analyses in patients with group 1 and group 4 PH demonstrated consistent findings with those observed in the overall study cohort. Respiratory RAP variations reflect RV diastolic function, are independent of RV-PA coupling or tricuspid regurgitation, are associated with exercise-induced haemodynamic changes, and are prognostic in PH.

Trial registration. NCT04663217.
Shaking table test on damage mechanism of bedrock and overburden layer slope based on the time–frequency analysis method
Authors: Yang Changwei , Chen Guangpeng , Yue Mao , Xu Xianqing , Su Ke , Li Zhuqing
Published: May 2024

To systematically analyze the damage caused by bedrock and overburden layer slope under seismic action, a set of large-scale shaking table test was designed and completed. Interpolation of the acceleration amplification coefficient, Hilbert–Huang transform and transfer function was adopted. The damage mechanisms of the bedrock and overburden layer slopes under seismic action are systematically summarized in terms of slope displacement, acceleration field, vibration amplitude, energy, vibration frequency, and damage level. The results show a significant acceleration amplification effect within the slope under seismic action and a localized amplification effect at the top and trailing edges of the slope. With an increase in the input seismic intensity, the difference in the vibration amplitude between the overburden layer and bedrock increased, low-frequency energy of the overburden layer was higher than that of the bedrock, and the vibration frequency of the overburden layer was smaller than that of the bedrock. These differences cause the interface to experience cyclic loading continuously, resulting in the damage degree of the overburden layer at the interface being larger than that of the bedrock, reduction of the shear strength, and eventual formation of landslides. The displacement in the middle of the overburden is always greater than that at the top. Therefore, under the action of an earthquake and gravity, the damage mode of the bedrock and overburden layer slope is such that the leading edge of the critical part pulls and slides at the trailing edge, and multiple tensile cracks are formed on the slope surface.
Predictive modeling of wide-shallow RC beams shear strength considering stirrups effect using (FEM-ML) approach
Authors: Soliman Ahmed A. , Mansour Dina M. , Khalil Ayman H. , Ebid Ahmed
Published: May 2024

This paper presents an analysis and prediction of the shear strength of wide-shallow reinforced concrete beams, utilizing Finite Element Analysis (FEA) and machine learning techniques. The methodology involves validating a detailed Finite Element Model (FEM) against experimental results, conducting a parametric study, and developing three Machine Learning prediction equations. The FEM captures concrete and steel behaviors, including cracking and crushing for concrete and linear isotropic properties for steel reinforcement. Loading and boundary conditions are defined for accuracy and validated against 13 experimental specimens, exhibiting a maximum 8% and 12% difference in loads and deflections, respectively. A parametric study generates a dataset of 77 wide beam configurations, exploring variations in beam widths, concrete strengths, compression rebars, and shear reinforcement. This dataset is used to develop machine learning models, including “Genetic Programming (GP)”, “Evolutionary Polynomial Regression (EPR)”, and “Artificial Neural Network (ANN)”. Comparative analysis reveals GP and EPR models with over 95% correlation, while the ANN model outperforms with 99% accuracy. Sensitivity analysis underscores the significant influence of concrete strength and beam aspect ratio on shear strength. In conclusion, the study demonstrates the potential of FEA and machine learning models to predict shear strength in wide-shallow reinforced concrete beams, providing valuable insights for architectural design and engineering practices and emphasizing the role of concrete strength and beam geometry in shear behavior.
Reservoir damage mechanism and “Double protection” drilling fluid of tight sandstone gas reservoir in central SiChuan Basin
Authors: Fan Yu , Huang Weian , Guo Jianhua , Bai Ruiyv , Jiang Lin , Wang Zengbao
Published: May 2024

It is very important to clarify the reservoir damage characteristics and damage characteristics and damage mechanism of tight sandstone gas reservoirs in Jinhua-Zhongtai mountain area of central SiChuan Basin, and put forward the technical countermeasures of “Double protection” drilling fluid to protect the reservoir and the environment, which is very important for the efficient well construction in this area. Through X-ray diffraction, scanning electron microscopy, casting thin sections and other testing methods, the mineral composition and microstructure characteristics of the block were analyzed, and the potential damage factors of the reservoir were clarified. Based on the sensitivity evaluation, it was revealed that the overall sensitivity damage of the block was weak. The main damage type was salt-sensitive damage, and the critical salinity was 9472.5 mg/L. On the basis of the environmental protection drilling fluid system used in this block, the surfactant which can effectively prevent gas invasion and reduce surface tension is selected, and the “Double protection” drilling fluid system is constructed. Through comprehensive performance test and reservoir protection performance evaluation, the core permeability damage rate of the optimized drilling fluid system is reduced from 88.77 to 18.66%, and the cuttings recovery rate is increased to more than 66%, and the cuttings expansion rate is reduced to less than 3.2%, which can effectively solve the problem of reservoir damage in drilling in Jinhua-Zhongtai mountain block in central Sichuan.
Identification and prioritization of risks for new entrants in automobile sector using Monte Carlo based approach
Authors: Farooq Sarmad , Naseem Afshan , Ahmad Yasir , Awais Akbar Muhammad , Ullah Mehran
Published: May 2024

The automotive industry serves as a crucial support system for the economies of industrialized nations in their pursuit of international market competitiveness. Despite this industry's importance, most developing countries face the challenge of acquiring a reasonable economic position at the global level in the automotive sector for various reasons. The most salient reasons include inconsistent government policies, multiple taxes, investor insecurity, political instability, and currency devaluation. Identifying risks is crucial for a new entrant in the already-established automotive industry. The researchers have used multiple (qualitative and quantitative) techniques to identify and prioritize risks in setting up manufacturing plants. The efforts to tackle these identified risks are undertaken at the domestic and government levels to smoothen the establishment of industry. The risks are first identified, in the current study, by reviewing the previous literature and conducting interviews of the various stakeholders (automotive dealers, managers, and customers). Then this study uses Monte Carlo simulation (MCS) approach and develops a risk exposure (high, medium, or low) matrix for the automotive industry of Pakistan. The findings reveal that the depreciation of local currency against the foreign exchange, oligopoly nature of competition, and low market acceptability of new entrants due to their products' image are the most critical risks the automobile industry faces. These findings will help automotive research institutes in developing national policies that specifically aim to support new players in the automotive industry, particularly in addressing high-priority hazards. The results may also provide valuable insights for new participants seeking to identify and address the key challenges in the Pakistani automotive industry before entering it.
Resource partitioning of a Mexican clam in species-poor Baltic Sea sediments indicates the existence of a vacant trophic niche
Authors: Karlson Agnes M. L. , Kautsky Nils , Granberg Matilda , Garbaras Andrius , Lim Hwanmi , Liénart Camilla
Published: May 2024

Invasive species are often generalists that can take advantage of formerly unexploited resources. The existence of such vacant niches is more likely in species-poor systems like the Baltic Sea. The suspension feeding wedge clam, Rangia cuneata, native to estuarine environments in the Gulf of Mexico, was sighted for the first time in the southeastern Baltic in 2010 and a few years later in the northern Baltic along the Swedish coast. To explore possible competition for food resources between R. cuneata and the three native clams inhabiting Baltic shallow soft bottoms, stable isotope and fatty acid analyses were conducted. There was no overlap between R. cuneata and any of the native species in either stable isotope or fatty acid niches. This suggests efficient partitioning of resources; multivariate analyses indicate that separation was driven mainly by δ13C and by fatty acids reflecting diatoms and cyanobacteria, respectively (e.g. 16:1ω7 and 18:3ω3). R. cuneata reflected seasonal variation in phytoplankton more than other clams reflecting higher trophic plasticity. In conclusion, the addition of R. cuneata to the Baltic shallow soft bottoms suggests the existence of a vacant trophic niche in these sediment habitats, however the long-term effects on other species and nutrient cycling requires further studies focusing on the population dynamics of R. cuneata and its impact on the Baltic Sea ecosystem.
Nowcasting methods to improve the performance of respiratory sentinel surveillance: lessons from the COVID-19 pandemic
Authors: Flores-Alvarado Sandra , Olivares María Fernanda , Vergara Natalia , García Christian , Canals Mauricio , Cuadrado Cristóbal
Published: May 2024

Respiratory diseases, including influenza and coronaviruses, pose recurrent global threats. This study delves into the respiratory surveillance systems, focusing on the effectiveness of SARI sentinel surveillance for total and severe cases incidence estimation. Leveraging data from the COVID-19 pandemic in Chile, we examined 2020–2023 data (a 159-week period) comparing census surveillance results of confirmed cases and hospitalizations, with sentinel surveillance. Our analyses revealed a consistent underestimation of total cases and an overestimation of severe cases of sentinel surveillance. To address these limitations, we introduce a nowcasting model, improving the precision and accuracy of incidence estimates. Furthermore, the integration of genomic surveillance data significantly enhances model predictions. While our findings are primarily focused on COVID-19, they have implications for respiratory virus surveillance and early detection of respiratory epidemics. The nowcasting model offers real-time insights into an outbreak for public health decision-making, using the same surveillance data that is routinely collected. This approach enhances preparedness for emerging respiratory diseases by the development of practical solutions with applications in public health.
Accelerated mineralization of textile wastewater under 222 nm irradiation from Kr/Cl2 excilamp: an environmentally friendly and energy efficient approach
Authors: Ahlawat Kiran , Jangra Ramavtar , Prakash Ram
Published: May 2024

The textile dyeing and manufacturing industry is the major producer of significant amounts of wastewater that contain persistent substances such as azo dyes that require adequate remediation measures. Far ultraviolet at 222 nm light may provide an advantage for contaminants degradation as compared to conventional UV sources (254 nm). In this paper, the degradation of reactive black 5 (RB5) in artificial wastewater has been performed using a 222 nm Kr/Cl2 excimer source under direct photolysis and an advanced oxidation process using TiO2/H2O2. The solution pH, catalyst concentration, 222 nm intensity, initial concentration of dye, and addition of H2O2 influence the degradation rate constant. The molar absorption coefficient, quantum yield of RB5 at 222 nm and the electrical energy per order (EEO) from different treatment methods have been reported. RB5 shows 1.26 times higher molar absorption at 222 nm than at 254 nm. The EEO for excimer-222/H2O2 ($$\sim$$
∼
13 kWh/m3) is five times lower than that of the excimer-222/TiO2 process, which makes the process energy efficient. The degradation of wastewater has been carried out at three distinct pH values (2, 6, and 10), and the pH level of 10 exhibited the highest degree of degradation. The degradation rate in the alkaline medium is 8.27 and 2.05 times higher than in the acidic or ambient medium. Since textile effluent is highly alkaline, this result is significant, as no neutralization of the wastewater is required, and direct treatment is possible. A possible degradation pathway has been established based on Fourier transform infrared spectroscopy (FTIR) and high resolution mass spectroscopy (HRMS) analysis. The phytotoxicity of the treated wastewater has also been evaluated for its suitability for reuse in agriculture. The study reveals that the excimer-222/H2O2 treated wastewater significantly enhanced the germination percentage of Raphanus sativus seed (97%) compared to dye wastewater-grown seeds (75%). This work offers crucial information for future studies on the direct and indirect photolysis of azo dyes, as well as insight into the process of RB5 degradation under Kr/Cl2 excimer radiation.
Leveraging the fundamentals of heat transfer and fluid mechanics in microscale geometries for automated next-generation sequencing library preparation
Authors: Ott Olivia , Tolppi Sabrina , Figueroa-Cruz Jennifer , Myagmar Khaliun , Unurbuyan Khulan , Tripathi Anubhav
Published: May 2024

Next-generation sequencing (NGS) is emerging as a powerful tool for molecular diagnostics but remains limited by cumbersome and inefficient sample preparation. We present an innovative automated NGS library preparation system with a simplified mechanical design that exploits both macro- and microfluidic properties for optimizing heat transfer, reaction kinetics, mass transfer, fluid mechanics, adsorption–desorption rates, and molecular thermodynamics. Our approach introduces a unique two-cannula cylindrical capillary system connected to a programmable syringe pump and a Peltier heating element able to execute all steps with high efficiency. Automatic reagent movement, mixing, and magnetic bead-based washing with capillary-based thermal cycling (capillary-PCR) are completely integrated into a single platform. The manual 3-h library preparation process is reduced to less than 15 min of hands-on time via optimally pre-plated reagent plates, followed by less than 6 h of instrument run time during which no user interaction is required. We applied this method to two library preparation assays with different DNA fragmentation requirements (mechanical vs. enzymatic fragmentation), sufficiently limiting consumable use to one cartridge and one 384 well-plate per run. Our platform successfully prepared eight libraries in parallel, generating sequencing data for both human and Escherichia coli DNA libraries with negligible coverage bias compared to positive controls. All sequencing data from our libraries attained Phred (Q) scores > 30, mapping to reference genomes at 99% confidence. The method achieved final library concentrations and size distributions comparable with the conventional manual approach, demonstrating compatibility with downstream sequencing and subsequent data analysis. Our engineering design offers repeatability and consistency in the quality of sequence-able libraries, asserting the importance of mechanical design considerations that employ and optimize fundamental fluid mechanics and heat transfer properties. Furthermore in this work, we provide unique insights into the mechanisms of sample loss within NGS library preparation assays compared with automated adaptations and pinpoint areas in which the principles of thermodynamics, fluid mechanics, and heat transfer can improve future mechanical design iterations.
No man’s land support the endemic Red Sea ghost crab (Ocypode saratan) in the Gulf of Eilat
Authors: Yosef Reuven , Elharar Royi , Kosicki Jakub Z.
Published: May 2024

Tourism pressure on the Red Sea ecosystem have posed significant threats to numerous endemic species, including the Ghost Crab Ocypode saratan, which is exclusively found along a small stretch of beach in the Eilat/Aqaba Red Sea Gulf. Due to the limited understanding of their ecology, we investigated how tourism impacts the behavior of this species. Employing a natural setup, we compared burrow dimensions, pyramid structures, and density across three distinct beach sections subjected to varying levels of human interference. Access to a secluded beach, referred to as “No Man’s Land,” provided a crucial control for our study. This facilitated a comparative analysis of ghost crab activity among beaches experiencing differing levels of human disturbances: (1) a tourist beach characterized by continual high disturbance, (2) a naval beach subject to moderate and sporadic disturbances, and (3) the isolated “no man’s land” beach devoid of human presence. Our observations revealed notable differences in ghost crab density among the three beaches. Furthermore, we observed that on the secluded beach, larger individuals tended to establish burrows farther from the waterline and construct taller sand pyramids. Given the significance of sexual selection processes, their conservation becomes imperative for the survival and potential expansion of the ghost crab population across the Gulf of Eilat/Aqaba. We propose a straight-forward and cost-effective strategy: the designation of short, secluded beach enclaves along this gulf. We believe that this approach will mitigate adverse impacts of tourisms while simultaneously benefiting various sandy beach species.
CILP2 is a potential biomarker for the prediction and therapeutic target of peritoneal metastases in colorectal cancer
Authors: Ha Ye Jin , Park Seong-Hwan , Tak Ka Hee , Lee Jong Lyul , Kim Chan Wook , Kim Jeong-Hwan , Kim Seon-Young , Kim Seon-Kyu , Yoon Yong Sik
Published: May 2024

Peritoneal metastases (PM) in colorectal cancer (CRC) is associated with a dismal prognosis. Identifying and exploiting new biomarkers, signatures, and molecular targets for personalised interventions in the treatment of PM in CRC is imperative. We conducted transcriptomic profiling using RNA-seq data generated from the primary tissues of 19 CRC patients with PM. Using our dataset established in a previous study, we identified 1422 differentially expressed genes compared to non-metastatic CRC. The profiling demonstrated no differential expression in liver and lung metastatic CRC. We selected 12 genes based on stringent criteria and evaluated their expression patterns in a validation cohort of 32 PM patients and 84 without PM using real-time reverse transcription-polymerase chain reaction. We selected cartilage intermediate layer protein 2 (CILP2) because of high mRNA expression in PM patients in our validation cohort and its association with a poor prognosis in The Cancer Genome Atlas. Kaplan–Meier survival analysis in our validation cohort demonstrated that CRC patients with high CILP2 expression had significantly poor survival outcomes. Knockdown of CILP2 significantly reduced the proliferation, colony-forming ability, invasiveness, and migratory capacity and downregulated the expression of molecules related to epithelial-mesenchymal transition in HCT116 cells. In an in vivo peritoneal dissemination mouse knockdown of CILP2 also inhibited CRC growth. Therefore, CILP2 is a promising biomarker for the prediction and treatment of PM in CRC.
Investigating the efficacy of purified tannin extracts from underutilized temperate forages in reducing enteric methane emissions in vitro
Authors: Verma S. , Akpensuen T. T. , Wolffram S. , Salminen J.-P. , Taube F. , Blank R. , Kluß C. , Malisch C. S.
Published: May 2024

The study investigated how the concentration and composition of purified tannin extracts, at various inclusion rates, affect the ruminal in vitro fermentation parameters. Tannin extracts were isolated from four different forage species: birdsfoot trefoil (Lotus corniculatus), sulla (Hedysarum coronarium), big trefoil (Lotus pedunculatus), and salad burnet (Sanguisorba minor). Plants extracts were purified by Sephadex LH-20 gel chromatography and analyzed by UPLC–ESI–MS/MS. The results showed a large variation among the extracts from different species in terms of tannin composition and structural features. The extracts from salad burnet were dominated by hydrolysable tannins, comprising mainly ellagitannins. The extracts derived from sulla and big trefoil contained predominantly proanthocyanidins (PA), primarily composed of prodelphinidins with high mean degree of polymerisation (mDP). Birdsfoot trefoil extracts comprised procyanidin-rich PAs with low mDP. To determine whether the combined presence of tannins and flavonoid together lead to synergistic or antagonistic effects, the tannin extracts were incubated both with or without rutin at concentrations of 10, 20, and 30 g/kg DM, using a base substrate of perennial ryegrass (Lolium perenne, control). In general, all the tannin extracts decreased methane (CH4) production compared to the control, while no significant effect of rutin was observed on both gas (GP) and CH4 production, neither pure, nor in the simultaneous presence of tannins. The highest CH4 reduction (15%, at 30 g/kg DM) was observed from sulla and big trefoil extracts compared to control, but this was also supplemented with a concomitant reduction in GP (11%) indicating a reduction in feed digestibility. The extracts from birdsfoot trefoil and salad burnet reduced CH4 by up to 12% without significantly reducing GP, indicating the importance of tannin composition on ruminal fermentation.
An ethologically relevant paradigm to assess defensive response to looming visual contrast stimuli
Authors: Calanni Juan S. , Aranda Marcos L. , Dieguez Hernán H. , Dorfman Damian , Schmidt Tiffany M. , Rosenstein Ruth E.
Published: May 2024

In the animal kingdom, threat information is perceived mainly through vision. The subcortical visual pathway plays a critical role in the rapid processing of visual information-induced fear, and triggers a response. Looming-evoked behavior in rodents, mimicking response to aerial predators, allowed identify the neural circuitry underlying instinctive defensive behaviors; however, the influence of disk/background contrast on the looming-induced behavioral response has not been examined, either in rats or mice. We studied the influence of the dark disk/gray background contrast in the type of rat and mouse defensive behavior in the looming arena, and we showed that rat and mouse response as a function of disk/background contrast adjusted to a sigmoid-like relationship. Both sex and age biased the contrast-dependent response, which was dampened in rats submitted to retinal unilateral or bilateral ischemia. Moreover, using genetically manipulated mice, we showed that the three type of photoresponsive retinal cells (i.e., cones, rods, and intrinsically photoresponsive retinal ganglion cells (ipRGCs)), participate in the contrast-dependent response, following this hierarchy: cones > > rods > >  > ipRGCs. The cone and rod involvement was confirmed using a mouse model of unilateral non-exudative age-related macular degeneration, which only damages canonical photoreceptors and significantly decreased the contrast sensitivity in the looming arena.
Consumption of interesterified palm oil leads inflammation of white adipose tissue and triggers metabolic disturbances in mice on a high-fat diet
Authors: Martins Bruna Cadete , da Silva Ribeiro Mayara , Teixeira Ananda Vitoria Silva , Peixoto Thamara Cherem , Lisboa Patrícia Cristina , Martins Fabiane Ferreira , Souza-Mello Vanessa , Daleprane Julio Beltrame
Published: May 2024

Growing obesity is linked to shifts in dietary patterns, particularly the increased intake of ultra-processed high-fat foods. This study aimed to evaluate the effects of interesterified palm oil consumption on glucose homeostasis, adipose tissue remodeling, and hepatic lipogenesis in C57BL/6 mice fed a high-fat diet. Sixty C57BL/6 mice were divided into four groups (n = 15): the control group (C) fed a standard diet (4% soybean oil), the high-fat group (HF) (23.8% lard), the high palm oil fat group (HFP) (23.8% palm oil), and the high interesterified palm fat group (HFI) (23.8% interesterified palm oil) for 8 weeks (all groups received 50% energy from lipids). The HFI group exhibited higher body mass than the HF group (+ 11%, P < 0.05), which was attributed to an increased percentage of fat mass. Plasma concentrations of IL-6, insulin, and HOMA-IR were also elevated in the HFI group. Both the HFP and HFI groups showed hypertrophied adipocytes and pancreatic islets, increased alpha and beta cell masses, hepatic steatosis, low expression of genes related to beta-oxidation, and upregulated lipogenesis. In conclusion, the consumption of interesterified palm oil alters inflammatory and glucose profiles.
The impact mechanism of telework on job performance: a cross-level moderation model of digital leadership
Authors: Liao Meihui , Li Shiyuan , Liu Hongda
Published: May 2024

Traditional enterprise management believes that telecommuting activities are out of the enterprise's control, which may reduce staff performance. We use the extension of job demand-resource theory and work embeddedness theory to develop and test the intermediary mechanism of embedded in and out of work in telework. Moreover, it judges the mediating effect of job embeddedness on telecommuting → job performance. With the help of family conflict theory, we have revealed the possible performance changes in telework and the impact of family on telework. We predict embedding outside of work may reduce job performance. However, this worry will not happen under the adjustment of digital leadership and job insecurity. We collected survey data from 36 enterprise teams and 328 members. We have confirmed that work performance will not be reduced by telecommuting. Digital leadership magnifies the embedding of telecommuting resources into employees’ work to a certain extent and inhibits the embedding problem outside work caused by telecommuting requirements. The telecommuting requirement may become a positive factor for employees staying home and avoiding workplace conflicts. We confirmed the inhibitory effect of job embeddedness on turnover rate and expanded the antecedent model of job embeddedness theory.
Design of osteosynthesis plate for detecting bone union using wire natural frequency
Authors: Chancharoen Pisitpong , Tangpornprasert Pairat , Amarase Chavarin , Tantavisut Saran , Virulsri Chanyaphan
Published: May 2024

We have developed a novel osteosynthesis plate with bone union detection using a wire's natural frequency (BUDWF) to provide the quantitative result of bone union detection. The concept for detecting bone union is measuring the rate of frequency change. The frequency is measured from sound generated from the wire attached to a modified plate. The plate is modified from a Syncera ADLER B0409.10 and attached with 0.3 mm diameter 316L stainless steel wire. The sound generation mechanism was created by PEEK and installed on the plate to generate the sound. The preliminary experiments were conducted on a Sawbones tibia composite mimic. We used the cut Sawbones to create fracture samples with a 0, 0.5, 1-, 2-, and 5-mm gap representing the fractured bone with different gap sizes and prepared uncut Sawbones as a union sample. These samples were tested five times, and the sound was recorded from a condenser microphone and analyzed. We found that the BUDWF can differentiate samples with a fracture gap above 2 mm from the union sample, as the differences in the rates of frequency change between samples with a fracture gap above 2 mm and union samples were statistically significant. However, there was a limitation that the BUDWF plate was still unable to differentiate the 0 mm fracture gap and the union sample in this study.
Mediator kinase inhibition impedes transcriptional plasticity and prevents resistance to ERK/MAPK-targeted therapy in KRAS-mutant cancers
Authors: Nussbaum Daniel P. , Martz Colin A. , Waters Andrew M. , Barrera Alejandro , Liu Annie , Rutter Justine C. , Cerda-Smith Christian G. , Stewart Amy E. , Wu Chao , Cakir Merve , Levandowski Cecilia B. , Kantrowitz David E. , McCall Shannon J. , Pierobon Mariaelena , Petricoin Emanuel F. , Joshua Smith J. , Reddy Timothy E. , Der Channing J. , Taatjes Dylan J. , Wood Kris C.
Published: May 2024

Acquired resistance remains a major challenge for therapies targeting oncogene activated pathways. KRAS is the most frequently mutated oncogene in human cancers, yet strategies targeting its downstream signaling kinases have failed to produce durable treatment responses. Here, we developed multiple models of acquired resistance to dual-mechanism ERK/MAPK inhibitors across KRAS-mutant pancreatic, colorectal, and lung cancers, and then probed the long-term events enabling survival against this class of drugs. These studies revealed that resistance emerges secondary to large-scale transcriptional adaptations that are diverse and cell line-specific. Transcriptional reprogramming extends beyond the well-established early response, and instead represents a dynamic, evolved process that is refined to attain a stably resistant phenotype. Mechanistic and translational studies reveal that resistance to dual-mechanism ERK/MAPK inhibition is broadly susceptible to manipulation of the epigenetic machinery, and that Mediator kinase, in particular, can be co-targeted at a bottleneck point to prevent diverse, cell line-specific resistance programs.
Reducing the fatal attraction of nocturnal insects using tailored and shielded road lights
Authors: Dietenberger Manuel , Jechow Andreas , Kalinkat Gregor , Schroer Sibylle , Saathoff Birte , Hölker Franz
Published: May 2024

The attraction of insects to artificial light is a global environmental problem with far-reaching implications for ecosystems. Since light pollution is rarely integrated into conservation approaches, effective mitigation strategies towards environmentally friendly lighting that drastically reduce insect attraction are urgently needed. Here, we tested novel luminaires in two experiments (i) at a controlled experimental field site and (ii) on streets within three municipalities. The luminaires are individually tailored to only emit light onto the target area and to reduce spill light. In addition, a customized shielding renders the light source nearly invisible beyond the lit area. We show that these novel luminaires significantly reduce the attraction effect on flying insects compared to different conventional luminaires with the same illuminance on the ground. This underlines the huge potential of spatially optimized lighting to help to bend the curve of global insect decline without compromising human safety aspects. A customized light distribution should therefore be part of sustainable future lighting concepts, most relevant in the vicinity of protected areas.
Resource theory of imaginarity in distributed scenarios
Authors: Wu Kang-Da , Kondra Tulja Varun , Scandolo Carlo Maria , Rana Swapan , Xiang Guo-Yong , Li Chuan-Feng , Guo Guang-Can , Streltsov Alexander
Published: May 2024

The resource theory of imaginarity studies the operational value of imaginary parts in quantum states, operations, and measurements. Here we introduce and study the distillation and conversion of imaginarity in distributed scenario. This arises naturally in bipartite systems where both parties work together to generate the maximum possible imaginarity on one of the subsystems. We give exact solutions to this problem for general qubit states and pure states of arbitrary dimension. We present a scenario that demonstrates the operational advantage of imaginarity: the discrimination of quantum channels without the aid of an ancillary system. We then link this scenario to local operations and classical communications(LOCC) discrimination of bipartite states. We experimentally demonstrate the relevant assisted distillation protocol, and show the usefulness of imaginarity in the aforementioned two tasks.