bluuebunny/crossref_metadata_2025 huggingface dataset:
Expression of the DNAM-1 ligands, Nectin-2 (CD112) and poliovirus receptor (CD155), on dendritic cells: relevance for natural killer-dendritic cell interaction
Authors: Pende Daniela , Castriconi Roberta , Romagnani Paola , Spaggiari Grazia Maria , Marcenaro Stefania , Dondero Alessandra , Lazzeri Elena , Lasagni Laura , Martini Stefania , Rivera Paola , Capobianco Andrea , Moretta Lorenzo , Moretta Alessandro , Bottino Cristina
Published: November 2005

In this study, we demonstrate the involvement of DNAM-1-triggering receptor and its ligands, poliovirus receptor (PVR) and Nectin-2, in natural killer (NK) cell-mediated lysis of dendritic cells (DCs). The surface expression of both ligands was up-regulated in DCs as compared to monocytes. It reached maximal densities after DC maturation induced by different stimuli including lipopolysaccharide (LPS), poly I:C, flagellin, and CD40L. Both immunohistochemical analysis and confocal microscopy revealed expression of DNAM-1 ligands by DCs in lymph nodes in which they were localized in the parafollicular T-cell region and surrounded the high endothelial venules. Remarkably, in cytolytic assays, DNAM-1 cooperated with NKp30 in the NK-mediated killing of both immature and mature DCs and the degree of contribution of DNAM-1 appeared to correlate with the surface densities of its specific ligands PVR and Nectin-2.
Role of platelet surface PF4 antigenic complexes in heparin-induced thrombocytopenia pathogenesis: diagnostic and therapeutic implications
Authors: Rauova Lubica , Zhai Li , Kowalska M. Anna , Arepally Gowthami M. , Cines Douglas B. , Poncz Mortimer
Published: November 2005

Heparin-induced thrombocytopenia (HIT) antibodies recognize complexes between heparin and platelet factor 4 (PF4). Heparin and PF4 bind HIT antibodies only over a narrow molar ratio. We explored the involvement of platelet surface–bound PF4 as an antigen in the pathogenesis of experimental HIT. We show that cell-surface PF4 complexes are also antigenic only over a restricted concentration range of PF4. Heparin is not required for HIT antibody binding but shifts the concentration of PF4 needed for optimal surface antigenicity to higher levels. These data are supported by in vitro studies involving both human and murine platelets with exogenous recombinant human (h) PF4 and either an anti–PF4-heparin monoclonal antibody (KKO) or HIT immunoglobulin. Injection of KKO into transgenic mice expressing different levels of hPF4 demonstrates a correlation between the severity of the thrombocytopenia and platelet hPF4 expression. Therapeutic interventions in this model using high-dose heparin or protamine sulfate support the pathogenic role of surface PF4 antigenic complexes in the etiology of HIT. We believe that this focus on surface PF4 advances our understanding of the pathogenesis of HIT, suggests ways to identify patients at high risk to develop HIT upon heparin exposure, and offers new therapeutic strategies.
Chemokine and chemokine receptor expression during colony stimulating factor-1–induced osteoclast differentiation in the toothless osteopetrotic rat: a key role for CCL9 (MIP-1γ) in osteoclastogenesis in vivo and in vitro
Authors: Yang Meiheng , Mailhot Geneviève , MacKay Carole A. , Mason-Savas April , Aubin Justin , Odgren Paul R.
Published: November 2005

Osteoclasts differentiate from hematopoietic precursors under systemic and local controls. Chemokines and receptors direct leukocyte traffic throughout the body and may help regulate site-specific bone resorption. We investigated bone gene expression in vivo during rapid osteoclast differentiation induced by colony-stimulating factor 1 (CSF-1) in Csf1-null toothless (tl/tl) rats. Long-bone RNA from CSF-1–treated tl/tl rats was analyzed by high-density microarray over a time course. TRAP (tartrate-resistant acid phosphatase)–positive osteoclasts appeared on day 2, peaked on day 4, and decreased slightly on day 6, as marrow space was expanding. TRAP and cathepsin K mRNA paralleled the cell counts. We examined all chemokine and receptor mRNAs on the arrays. CCL9 was strongly induced and peaked on day 2, as did its receptor, CCR1, and regulatory receptors c-Fms (CSF-1 receptor) and RANK (receptor activator of nuclear factor κB). Other chemokines and receptors showed little or no significant changes. In situ hybridization and immunohistochemistry revealed CCL9 in small, immature osteoclasts on day 2 and in mature cells at later times. Anti-CCL9 antibody inhibited osteoclast differentiation in culture and significantly suppressed the osteoclast response in CSF-1–treated tl/tl rats. While various chemokines have been implicated in osteoclastogenesis in vitro, this first systematic analysis of chemokines and receptors during osteoclast differentiation in vivo highlights the key role of CCL9 in this process.
A recombinant single-chain IL-7/HGFβ hybrid cytokine induces juxtacrine interactions of the IL-7 and HGF (c-Met) receptors and stimulates the proliferation of CFU-S12, CLPs, and pre-pro-B cells
Authors: Lai Laijun , Zeff Richard A. , Goldschneider Irving
Published: November 2005

A novel recombinant interleukin-7/hepatocyte growth factor β-chain (IL-7/HGFβ) hybrid cytokine was constructed as a single chain (sc) composed of IL-7 and HGFβ connected by a flexible linker. Unlike recombinant (r) IL-7, which stimulated pro-B cells and pre-B cells only, scIL-7/HGFβ stimulated the proliferation of pre-pro-B cells, common lymphoid progenitors (CLPs), and colony-forming unit (CFU)-S12 in cultures of IL-7-/- mouse BM cells. When injected in vivo, 3- to 4-fold more splenic B-lineage cells appeared in recipients of bone marrow (BM) cells from the scIL-7/HGFβ-stimulated cultures than from rIL-7-stimulated cultures. Moreover, on a per-cell basis, scIL-7/HGFβ culture-generated cells produced 16- to 20-fold more BM and splenic B-lineage cells than did normal BM cells. Antibody blocking, receptor phosphorylation, and confocal microscopy demonstrated that scIL-7/HGFβ signals though both the IL-7 and HGF (c-Met) receptors, which form IL-7R/c-Met complexes on the surface of CLPs and pre-pro-B cells. In addition, the IL-7Rα chain, γc chain, and c-Met were coisolated from purified CLPs and pre-pro-B cells on scIL-7/HGFβ affinity gels, indicating that they are major components of the IL-7/HGFβ receptor. Hence, the present results demonstrate that the IL-7/HGFβ hybrid cytokine efficiently and selectively stimulates the most primitive B-lineage precursors in BM by inducing juxtacrine interactions between the IL-7 and c-Met receptors.
Epigenetic processes play a major role in B-cell-specific gene silencing in classical Hodgkin lymphoma
Authors: Ushmorov Alexey , Leithäuser Frank , Sakk Olena , Weinhaüsel Andreas , Popov Sergey W. , Möller Peter , Wirth Thomas
Published: November 2005

Many B-lineage-specific genes are down-regulated in Hodgkin and Reed-Sternberg (HRS) cells of classical Hodgkin lymphoma (cHL). We investigated the involvement of epigenetic modifications in gene silencing in cHL cell lines and in microdissected primary HRS cells. We assessed the expression and methylation status of CD19, CD20, CD79B, SYK, PU.1, BOB.1/OBF.1, BCMA, and LCK, all of which are typically down-regulated in cHL. We could reactivate gene expression in cHL cell lines with the DNA demethylating agent 5-aza-deoxycytidine (5-aza-dC). Using methylation-specific polymerase chain reaction (MSP), bisulfite genomic sequencing, and digestion with methylation-sensitive endonuclease followed by polymerase chain reaction (PCR), we determined the methylation status of promoter regions of PU.1, BOB.1/OBF.1, CD19, SYK, and CD79B. Down-regulation of transcription typically correlated with hypermethylation. Using bisulfite genomic sequencing we found that in microdissected HRS cells of primary cHL SYK, BOB.1/OBF.1, and CD79B promoters were also hypermethylated. Ectopic expression of both Oct2 and PU.1 in a cHL cell line potentiated endogenous PU.1 and SYK expression after 5-aza-dC treatment. These observations indicate that silencing of the B-cell-specific genes in cHL may be the consequence of a compromised regulatory network where down-regulation of a few master transcription factors results in silencing of numerous genes. (Blood. 2006;107:2493-2500)
Expression and genomic organization of zonadhesin-like genes in three species of fish give insight into the evolutionary history of a mosaic protein
Authors: Hunt Peter ND , Wilson Michael D , von Schalburg Kristian R , Davidson William S , Koop Ben F
Published: November 2005

Background

The mosaic sperm protein zonadhesin (ZAN) has been characterized in mammals and is implicated in species-specific egg-sperm binding interactions. The genomic structure and testes-specific expression of zonadhesin is known for many mammalian species. All zonadhesin genes characterized to date consist of meprin A5 antigen receptor tyrosine phosphatase mu (MAM) domains, mucin tandem repeats, and von Willebrand (VWD) adhesion domains. Here we investigate the genomic structure and expression of zonadhesin-like genes in three species of fish.

Results

The cDNA and corresponding genomic locus of a zonadhesin-like gene (zlg) in Atlantic salmon (Salmo salar) were sequenced. Zlg is similar in adhesion domain content to mammalian zonadhesin; however, the domain order is altered. Analysis of puffer fish (Takifugu rubripes) and zebrafish (Danio rerio) sequence data identified zonadhesin (zan) genes that share the same domain order, content, and a conserved syntenic relationship with mammalian zonadhesin. A zonadhesin-like gene inD. reriowas also identified. Unlike mammalian zonadhesin,D. rerio zanandS. salar zlgwere expressed in the gut and not in the testes.

Conclusion

We characterized likely orthologs of zonadhesin in bothT. rubripesandD. rerioand uncovered zonadhesin-like genes inS. salarandD. rerio. Each of these genes contains MAM, mucin, and VWD domains. While these domains are associated with several proteins that show prominent gut expression, their combination is unique to zonadhesin and zonadhesin-like genes in vertebrates. The expression patterns of fish zonadhesin and zonadhesin-like genes suggest that the reproductive role of zonadhesin evolved later in the mammalian lineage.
Review of the temporal and geographical distribution of measles virus genotypes in the prevaccine and postvaccine eras
Authors: Riddell Michaela A , Rota Jennifer S , Rota Paul A
Published: November 2005

Molecular epidemiological investigation of measles outbreaks can document the interruption of endemic measles transmission and is useful for establishing and clarifying epidemiological links between cases in geographically distinct clusters. To determine the distribution of measles virus genotypes in the prevaccine and postvaccine eras, a literature search of biomedical databases, measles surveillance websites and other electronic sources was conducted for English language reports of measles outbreaks or genetic characterization of measles virus isolates. Genotype assignments based on classification systems other than the currently accepted WHO nomenclature were reassigned using the current criteria. This review gives a comprehensive overview of the distribution of MV genotypes in the prevaccine and postvaccine eras and describes the geographically diverse distribution of some measles virus genotypes and the localized distributions of other genotypes.
The BTB domain of the nuclear matrix protein NRP/B is required for neurite outgrowth
Authors: Kim Tae-Aug , Jiang Shuxian , Seng Seyha , Cha Kiweon , Avraham Hava Karsenty , Avraham Shalom
Published: November 2005

The neuronal nuclear matrix protein, NRP/B, contains a BTB domain and kelch repeats and is expressed in primary neurons but not in primary glial cells. To examine the function of NRP/B in neurons, we analyzed the structure/function of the NRP/B-BTB domain and its role in neurite outgrowth. Based on three-dimensional modeling of NRP/B, we generated an NRP/B-BTB mutant containing three mutations in the conserved amino acids D47A, H60A and R61D that was termed BTB mutant A. BTB mutant A significantly reduced the dimerization of NRP/B compared to wild-type NRP/B. The NRP/B-BTB domain was required for nuclear localization and mediated the association of NRP/B with p110RB through the TR subdomain within the B pocket of p110RB. Overexpression of wild-type NRP/B and NRP/B-BTB domain significantly induced neurite outgrowth in PC12 cells and enhanced the G0-G1 cell population by ∼23% compared to the control cells, whereas NRP/B-BTB mutant A reduced neurite outgrowth by 70-80%, and inhibited NRP/B-p110RB association. Single cell microinjection of NRP/B-specific antibodies also blocked the neurite outgrowth of PC12 cells upon NGF stimulation. Interference of NRP/B expression by small interfering RNA (NRP/B-siRNA) inhibited neurite outgrowth and suppressed the NGF-induced outgrowth of neurites in PC12 cells. Additionally, p110RB phosphorylation at serine residue 795 was significantly reduced in PC12 cells treated with NRP/B siRNA compared to those treated with control GFP-siRNA, indicating that p110RB is a downstream target of NRP/B. Thus, the BTB domain of NRP/B regulates neurite outgrowth through its interaction with the TR subdomain within the B pocket of p110RB, and the conserved amino acids D47A, H60A and R61D within this domain of NRP/B are crucial residues for neurite extension in neuronal cells. These findings support a role for the BTB-domain of NRP/B as an important regulator of neuronal differentiation.
The Effect of Microbial Fe(III) Reduction on Smectite Flocculation
Authors: Kim Jin-Wook , Furukawa Yoko , Dong Hailiang , Newell Steven W.
Published: November 2005

This study was undertaken to investigate the changes in flocculation properties of Fe-rich smectite (nontronite, NAu-1) suspensions, including settling velocity, aggregate size and floc architecture associated with microbial Fe(III)-reduction in the smectite structure. The dissimilatory Fe-reducing bacterium Shewanella oneidensis MR-1 was incubated with lactate as the electron donor and structural Fe(III) as the sole electron acceptor for 3, 12, 24 and 48 h in an anaerobic chamber. Two controls were prepared; the first was identical to the experimental treatments except that heat-killed cells were used (non-reduced control), and the second control was the same as the first except that the incubation was carried out in an aerobic environment. The extent of Fe(III) reduction for the 48 h incubation was observed to reach up to 18%. Neither the non-reduced control nor the aerobically inoculated sample showed Fe(III) reduction. Compared with the non-reduced control, there was a 2.7 μm increase in mean aggregate size and a 30-fold increase in average settling velocity in the bioreduced smectite suspensions as measured using a Micromeritics Sedigraph®. The aerobically inoculated smectite showed a similar aggregate-size distribution to that of the non-reduced control. Significant changes in physical properties of smectite suspensions induced by microbial Fe(III) reduction were measured directly using transmission electron microscopy. The floc architecture of bioreduced smectite revealed less open structures compared to those of a non-reduced control. The aspect ratio (thickness/length) of individual smectite particle increased from 0.11 for the non-reduced control to 0.18 on average for the bioreduced smectite suspensions. The effects of pH on the clay flocculation were minimal in this study because the value of pH remained nearly constant at pH = 7.0–7.3 before and after the experiments. We therefore suggest that the increase in net negative charge caused by microbial Fe(III) reduction significantly promoted clay flocculation by increasing the electrochemical attraction in the smectite suspensions.
Fe-Cycle Bacteria from Industrial Clays Mined in Georgia, USA
Authors: Shelobolina Evgenya S. , Pickering Sam M. , Lovley Derek R.
Published: November 2005

Dark Fe oxides and sulfides are major discoloring impurities in mined commercial white kaolin clay. In order to evaluate the potential influence of Fe-cycle bacteria on Fe cycling during post-depositional clay-weathering alteration, Fe(III)-reducing and/or Fe(II)-oxidizing microorganisms were examined in open-pit, subsurface mine samples from kaolin lenses and smectite formations collected from sites in central Georgia. Samples of varying age were examined, including late Eocene smectite overburden, hard kaolin of Middle Eocene age, soft gray kaolin from the late Paleocene, and soft tan kaolin of late Cretaceous age. These clays contained 0.06–5.33% organic carbon, which included various potential organic electron donors for bacterial metabolism: formate (1.1–30.6 mmol/kg), acetate (0–40.5 mmol/kg), lactate (0–12.1 mmol/kg), pyruvate (0.4–78 mmol/kg), oxalate (0–141.7 mmol/kg), and citrate (0–1.4 mmol/kg). All clay samples studied had small concentrations of ‘bio-available’ Fe(III) (0.5 M HCl-extractable Fe, 0.5–2.8 mmol/kg) compared to total Fe (HF-extractable, 25–171.9 mmol/kg). The highest Fe(III)/[Fe(II)+Fe(III)] ratio and the lowest organic carbon content were in kaolin samples in which Fe(III) reduction was determined to be the dominant terminal electron accepting process by hydrogen analysis. All clay samples showed greater numbers of Fe(II)-oxidizing bacteria (22–22,000 cells/g) than Fe(III)-reducing bacteria (3–410 cells/g) as determined by MPN analysis. The Fe(III)-reducing activity in clays could be stimulated with the addition of 1 mM of the Fe(III) chelator, nitrilotriacetic acid. The addition of nitrate stimulated anaerobic Fe(II) oxidation. These results suggest that anaerobic bacteria involved in both oxidation and reduction of Fe exist in these subsurface clay formations, and might have had an influence on post-depositional weathering reactions.
Oxidation of 1-Naphthol Coupled to Reduction of Structural Fe3+ in Smectite
Authors: Jacqueline Arroyo L. , Li Hui , Teppen Brian J. , Johnston Cliff T. , Boyd Stephen A.
Published: November 2005

Sorption and transformation of 1-naphthol by a K-smectite (K-SWy-2) were studied using batch sorption isotherms, Fourier-transform infrared spectroscopy (FTIR), and X-ray diffraction (XRD). The sorbents included three preparations of the reference smectite clay (SWy-2): (1) whole clay containing naturally occurring carbonate impurities, (2) SWy-2 with the removal of carbonate impurities, and (3) the carbonate-free SWy-2 fraction amended with calcite. For the whole clay and carbonate-free clay amended with calcite, >80% of added 1-naphthol disappeared from aqueous solution within 24 h, corresponding to a sorbed concentration of ≥2 mg/g of clay. In contrast, only 35% of the added 1-naphthol disappeared from solution in the carbonate-free clay after 24 h of exposure. For the clays from the three preparations in this study, <1% of sorbed 1-naphthol could be recovered by methanol extraction from the clays. The XRD data suggested that 1-naphthol was intercalated in the smectite, but was not conclusive because the 1-naphthol sorption range (1.5–2.8 mg/g of clay) in this study had relatively minor effects on the XRD patterns. The FTIR spectra of sorbed 1-naphthol-clay complexes demonstrated structural Fe3+ reduction. The spectra also showed evidence of the transformation of 1-naphthol. It suggests that reduction of structural Fe3+ may be coupled to oxidation/polymerization of 1-naphthol. Further transformation of oxidized 1-naphthol, such as by oxidative coupling reactions, is implicated by formation of a dark gray color on the clay and the inability to extract sorbed 1-naphthol.
Experimental Study of Smectite Interaction with Metal Fe at Low Temperature: 1. Smectite Destabilization
Authors: Lantenois Sébastien , Lanson Bruno , Muller Fabrice , Bauer Andreas , Jullien Michel , Plançon Alain
Published: November 2005

Interaction between metal Fe and a variety of natural and synthetic smectite samples with contrasting crystal chemistry was studied by scanning electron microscopy and X-ray diffraction from experiments conducted at 80°C. These experiments demonstrate an important reactivity contrast as a function of smectite crystal chemistry. An XRD method involving the use of an internal standard allowed quantification of the relative proportion of smectite destabilized as a function of initial pH conditions as well as of smectite structural parameters. In mildly acidic to neutral pH conditions, a significant proportion of metal Fe is corroded to form magnetite without smectite destabilization. Under basic pH conditions, smectite and metal Fe are partly destabilized to form magnetite and newly-formed 1:1 phyllosilicate phases (odinite and crondstedtite). More specifically, systematic destabilization of both metal Fe and smectite is observed for dioctahedral smectites while trioctahedral smectites are essentially unaffected under similar experimental conditions. In addition, smectite reactivity is enhanced with increasing Fe3+ content and with the presence of Na+ cations in smectite interlayers. A conceptual model for smectite destabilization is proposed. This model involves first the release of protons from smectite structure, MeFe3+OH groups being deprotonated preferentially and metal Fe acting as proton acceptor. Corrosion of metal Fe results from its interaction with these protons. The Fe2+ cations resulting from this corrosion process sorb on the edges of smectite particles to induce the reduction of structural Fe3+ and migrate into smectite interlayers to compensate for the increased layer-charge deficit. Interlayer Fe2+ cations subsequently migrate to the octahedral sheet of smectite because of the extremely large layer-charge deficit. At low temperature, this migration is favored by the reaction time and by the absence of protons within the di-trigonal cavity. Smectite destabilization results from the inability of the tetrahedral sheets to accommodate the larger dimensions of the newly formed trioctahedral domains resulting from the migration of Fe2+ cations.
Nickel Catalysts Supported on MgO/Smectite-Type Nanocomposites for Methane Reforming
Authors: Moronta Alexander , Iwasa Nobuhiro , Fujita Shin-Ichiro , Shimokawabe Masahide , Arai Masahiko
Published: November 2005

MgO-clay nanocomposites were prepared from a synthetic smectite-type clay, TS, using three different non-ionic surfactants (Igepal CA-720, Brij 30 and Brij 56) and the resulting clay nanocomposites were impregnated with Ni for the methane reforming reaction with carbon dioxide to synthesis gas. A Ni/TS catalyst was also prepared for comparison. The prepared supports and catalysts were characterized by X-ray diffraction, X-ray fluorescence, thermogravimetric analysis and N2 adsorption/desorption isotherms. The thermal stability, pore structure and the surface area strongly influence the catalytic behavior of the catalysts. The methane conversions (at 700°C for 4 h) were 91, 95 and 97% for Ni/TSIGE, Ni/TSBR30 and Ni/TSBR56, respectively, indicating that the surface properties and the catalytic performance of the resulting solids slightly improved as the polyethylene oxide number of the surfactant increased. A reduced conversion (10%) and a rapid deactivation was observed in the Ni/TS catalyst, attributed to its Na content and low thermal stability, which led to sintering and coke deposition.
Compositional and Structural Variation of Sudoite from the Betic Cordillera (Spain): A TEM/AEM Study
Authors: Ruiz Cruz María Dolores , de Galdeano Carlos Sanz
Published: November 2005

Sudoite from diagenetic to very low-grade metaclastites of the Betic Cordillera was studied by X-ray diffraction and transmission/analytical electron microscopy. Sudoite formed directly from dickite, the assemblage dickite + sudoite + illite being replaced at increasing metamorphic grade by the assemblage pyrophyllite + sudoite + illite. Sudoite ranges in composition from Mg-rich to Fe-rich chemistries. In addition, a wide variety of mixed-layered structures (illite-sudoite, pyrophyllite-sudoite, and dickite-sudoite) was also identified. Mg-rich sudoite shows a mean chemical composition of (Al2.91Fe0.252+Mg1.80)(Si3.10Al0.90)O10(OH)8, and a IIb ordered structure with b = 9.055 Å. Intermediate Fe-Mg sudoite exhibits a very variable composition, the Fe-rich phases having a mean composition of (Al2.09Fe0.613+Fe0.872+Mg1.44)(Si3.31Al0.69O10(OH)8. These are disordered polytypes with b values ranging from 9.070 to 9.101 Å. Fe occurs in both octahedral sheets, according to two types of substitutions: Fe3+ for Al in the dioctahedral sheet and Fe2+ for Mg in the trioctahedral sheet. Sudoite with such a composition has not been described previously.
The Nature of Zeolite Occurrences in Deposits of the Olduvai Basin, Northern Tanzania
Authors: Mees Florias , Stoops Georges , Van Ranst Eric , Paepe Roland , Van Overloop Elfi
Published: November 2005

The Plio-Pleistocene deposits of the Olduvai Basin in northern Tanzania consist of a sequence of lacustrine and fluvial sediments. They contain various amounts of zeolite minerals, the formation of which is related to an interaction of volcanic material or detrital clays with saline alkaline lake water and groundwater. Petrographic characteristics of zeolite occurrences provide information about their conditions of formation. They were studied for all four main stratigraphical units that are recognized at Olduvai (Beds I to IV), sampled in the southeastern part of the basin. In the lake-margin deposits of Bed I and the lower part of Bed II, chabazite is the dominant zeolite mineral accompanied by phillipsite and minor amounts of erionite and clinoptilolite. Chabazite commonly occurs as part of altered volcanic rock fragments, characterized by partial or complete dissolution of volcanic glass and the formation of chabazite inside vesicles, following the development of thin smectite coatings. It also formed within the sediment matrix, requiring extended periods of impregnation of the deposits by saline alkaline solutions. Chabazite also occurs extensively as coatings and infillings of pores, developed during periods of subaerial exposure which were characterized by high groundwater levels. Phillipsite formed at a later stage, from more evolved solutions, with higher K/Na ratios than during chabazite formation. The fluvial deposits of Bed IV, Bed III and the upper part of Bed II have a high analcime content. They also contain various amounts of chabazite, phillipsite and natrolite. All zeolite minerals mainly occur in pores. The predominance of analcime indicates a higher salinity and alkalinity than during the preceding period with sedimentation and diagenesis in a lake margin environment. Early development of zeolite occurrences, shortly after the deposits became exposed during breaks in sedimentation, is recorded for some intervals, where zeolites are covered by illuvial clay coatings or by sparitic carbonate cement. In most intervals, however, zeolites mainly formed at a later stage.
Emerging Patterns of Neuronal Responses in Supplementary and Primary Motor Areas during Sensorimotor Adaptation
Authors: Paz Rony , Natan Chen , Boraud Thomas , Bergman Hagai , Vaadia Eilon
Published: November 2005

Acquisition and retention of sensorimotor skills have been extensively investigated psychophysically, but little is known about the underlying neuronal mechanisms. Here we examine the evolution of neural activity associated with adaptation to new kinematic tasks in two cortical areas: the caudal supplementary motor area (SMA proper), and the primary motor cortex (MI). We investigate the hypothesis that adaptation starts at premotor areas, i.e., higher in the hierarchy of computation, until a stable representation is formed in primary areas. In accordance with previous studies, we found that adaptation can be characterized by two phases: an early phase that is accompanied by fast and substantial reduction of errors, followed by a late phase with slower and more moderate improvements in behavior. We used unsupervised clustering to separate the activity of the single cells into groups of cells with similar response patterns, under the assumption that each such subpopulation forms a functional unit. We specifically observed the number of clusters in each cortical area during early and late phases of the adaptation and found that the number of clusters is higher in the SMA during early phases of adaptation. In contrast, a higher number of clusters was observed in MI only during late phases. Our results suggest a new approach to analyze responses of large populations of neurons and use it to show a hierarchy of dynamic reorganization of functional groups during adaptation.
The Mechanosensitivity of Mouse Colon Afferent Fibers and Their Sensitization by Inflammatory Mediators Require Transient Receptor Potential Vanilloid 1 and Acid-Sensing Ion Channel 3
Authors: Jones R. Carter W. , Xu Linjing , Gebhart G. F.
Published: November 2005

Mechanical hypersensitivity of the colon underlies in part the chronic abdominal pain experienced by patients with irritable bowel syndrome, yet the molecules that confer mechanosensitivity to colon sensory neurons and their contribution to visceral pain are unknown. We tested the hypothesis that transient receptor potential vanilloid 1 (TRPV1) and acid-sensing ion channel 3 (ASIC3) are peripheral mechanosensors in colon afferent neuronal fibers that mediate visceral nociceptive behavior in mice. Visceral nociception, modeled by the visceromotor response to colorectal distension, and colon afferent fiber mechanosensitivity were assessed in control (C57BL/6) mice and two congenic knock-out mouse strains with deletions of either TRPV1 or ASIC3. Phasic colon distension (15-60 mmHg) produced graded behavioral responses in all three mouse strains. However, both TRPV1 and ASIC3 knock-out mice were significantly less sensitive to distension, with an average response magnitude only 58 and 50% of controls, respectively. The behavioral deficits observed in both strains of knock-out mice were associated with a significant and selective reduction in afferent fiber sensitivity to circumferential stretch of the colon, an effect that was mimicked in control preparations by pretreatment with capsazepine, a TRPV1 antagonist, but not amiloride, a nonselective ASIC antagonist (both 500μm). In addition, whereas stretch-evoked afferent fiber responses were enhanced by chemical inflammatory mediators in control mice, this effect was differentially impaired in both knock-out mouse strains. These results demonstrate a peripheral mechanosensory role for TRPV1 and ASIC3 in the mouse colon that contributes to nociceptive behavior and possibly peripheral sensitization during tissue insult.
Energy Inhibition Elevates β-Secretase Levels and Activity and Is Potentially Amyloidogenic in APP Transgenic Mice: Possible Early Events in Alzheimer's Disease Pathogenesis
Authors: Velliquette Rodney A. , O'Connor Tracy , Vassar Robert
Published: November 2005

β-Secretase [β-site amyloid precursor protein-cleaving enzyme 1 (BACE1)] is the key rate-limiting enzyme for the production of the β-amyloid (Aβ) peptide involved in the pathogenesis of Alzheimer's disease (AD). BACE1 levels and activity are increased in AD brain and are likely to drive Aβ overproduction, but the cause of BACE1 elevation in AD is unknown. Interestingly, cerebral glucose metabolism and blood flow are both reduced in preclinical AD, suggesting that impaired energy production may be an early pathologic event in AD. To determine whether reduced energy metabolism would cause BACE1 elevation, we used pharmacological agents (insulin, 2-deoxyglucose, 3-nitropropionic acid, and kainic acid) to induce acute energy inhibition in C57/B6 wild-type and amyloid precursor protein (APP) transgenic (Tg2576) mice. Four hours after treatment, we observed that reduced energy production caused a ∼150% increase of cerebral BACE1 levels compared with control. Although this was a modest increase, the effect was long-lasting, because levels of the BACE1 enzyme remained elevated for at least 7 d after a single dose of energy inhibitor. In Tg2576 mice, levels of the BACE1-cleaved APP ectodomain APPsβ were also elevated and paralleled the BACE1 increase in both relative amount and duration. Importantly, cerebral Aβ40 levels in Tg2576 were increased to ∼200% of control at 7 d after injection, demonstrating that energy inhibition was potentially amyloidogenic. These results support the hypothesis that impaired energy production in the brain may drive AD pathogenesis by elevating BACE1 levels and activity, which, in turn, lead to Aβ overproduction. This process may represent one of the earliest pathogenic events in AD.
Attention Modulates the Responses of Simple Cells in Monkey Primary Visual Cortex
Authors: McAdams Carrie J. , Reid R. Clay
Published: November 2005

Spatial attention has long been postulated to act as a spotlight that increases the salience of visual stimuli at the attended location. We examined the effects of attention on the receptive fields of simple cells in primary visual cortex (V1) by training macaque monkeys to perform a task with two modes. In the attended mode, the stimuli relevant to the animal's task overlay the receptive field of the neuron being recorded. In the unattended mode, the animal was cued to attend to stimuli outside the receptive field of that neuron. The relevant stimulus, a colored pixel, was briefly presented within a white-noise stimulus, a flickering grid of black and white pixels. The receptive fields of the neurons were mapped by correlating spikes with the white-noise stimulus in both attended and unattended modes. We found that attention could cause significant modulation of the visually evoked response despite an absence of significant effects on the overall firing rates. On further examination of the relationship between the strength of the visual stimulation and the firing rate, we found that attention appears to cause multiplicative scaling of the visually evoked responses of simple cells, demonstrating that attention reaches back to the initial stages of visual cortical processing.
Single Synaptic Vesicle Tracking in Individual Hippocampal Boutons at Rest and during Synaptic Activity
Authors: Lemke Edward A. , Klingauf Jurgen
Published: November 2005

How synaptic vesicles move within central nervous synapses to their docking sites at the plasma membrane is widely discussed in synaptic physiology. This question is especially difficult to investigate in the small hippocampal boutons, which themselves can slowly move during observation in primary cell culture. Here, we describe a single particle tracking method using dual fluorescent dye labels that enabled us to visualize the movements of a single vesicle and the respective synaptic bouton simultaneously during resting conditions and stimulation. We found vesicle mobility to be very low in the absence of stimulation, in line with previous studies. Interestingly, mobility was also found to be low during synaptic activity. We found that vesicles labeled preferentially via early, late, and spontaneous endocytotic mechanisms behaved similarly at rest and during stimulation.
Involvement of 5-HT1AReceptors in Prefrontal Cortex in the Modulation of Dopaminergic Activity: Role in Atypical Antipsychotic Action
Authors: Díaz-Mataix Llorenç , Scorza M. Cecilia , Bortolozzi Analía , Toth Miklos , Celada Pau , Artigas Francesc
Published: November 2005

Atypical antipsychotics increase dopamine (DA) release in the medial prefrontal cortex (mPFC), an effect possibly involved in the superior effects of atypical versus classical antipsychotics on cognitive/negative symptoms. We examined the role of 5-HT1Areceptors in the mPFC on the modulation of dopaminergic activity and the mesocortical DA releasein vivo. The highly selective 5-HT1Aagonist BAY x 3702 (BAY; 10-40 μg/kg, i.v.) increased the firing rate and burst firing of DA neurons in the ventral tegmental area (VTA) and DA release in the VTA and mPFC. The increase in DA release in both areas was potentiated by nomifensine coperfusion. The selective 5-HT1Aantagonist WAY-100635 reversed the effects of BAY in both areas, and the changes in the VTA were prevented by frontocortical transection.

The application of BAY in rat and mouse mPFC by reverse dialysis increased local extracellular DA at a low concentration (3 μm) and reduced it at a higher concentration (30 μm). Both effects disappeared in 5-HT1Aknock-out mice. In the presence of bicuculline, BAY reduced DA release at all concentrations. The atypical antipsychotics clozapine, olanzapine, and ziprasidone (but not haloperidol) enhanced DA release in the mPFC of wild-type but not 5-HT1Aknock-out mice after systemic and local (clozapine and olanzapine) administration in the mPFC. Likewise, bicuculline coperfusion prevented the elevation of DA release produced by local clozapine or olanzapine application. These results suggest that the activation of mPFC 5-HT1Areceptors enhances the activity of VTA DA neurons and mesocortical DA release. This mechanism may be involved in the elevation of extracellular DA produced by atypical antipsychotics.
The Adult Mouse Hippocampal Progenitor Is Neurogenic But Not a Stem Cell
Authors: Bull Natalie D. , Bartlett Perry F.
Published: November 2005

The aim of this investigation was to characterize the proliferative precursor cells in the adult mouse hippocampal region. Given that a very large number of new hippocampal cells are generated over the lifetime of an animal, it is predicted that a neural stem cell is ultimately responsible for maintaining this genesis. Although it is generally accepted that a proliferative precursor resides within the hippocampus, contradictory reports exist regarding the classification of this cell. Is it a true stem cell or a more limited progenitor? Using a strict functional definition of a neural stem cell and a number ofin vitroassays, we report that the resident hippocampal precursor is a progenitor capable of proliferation and multipotential differentiation but is unable to self-renew and thus proliferate indefinitely. Furthermore, the mitogen FGF-2 stimulates proliferation of these cells to a greater extent than epidermal growth factor (EGF). In addition, we found that BDNF was essential for the production of neurons from the hippocampal progenitor cells, being required during proliferation to trigger neuronal fate. In contrast, a bona fide neural stem cell was identified in the lateral wall of the lateral ventricle surrounding the hippocampus. Interestingly, EGF proved to be the stronger mitogenic factor for this cell, which was clearly a different precursor from the resident hippocampal progenitor. These results suggest that the stem cell ultimately responsible for adult hippocampal neurogenesis resides outside the hippocampus, producing progenitor cells that migrate into the neurogenic zones and proliferate to produce new neurons and glia.
A-Type and T-Type Currents Interact to Produce a Novel Spike Latency-Voltage Relationship in Cerebellar Stellate Cells
Authors: Molineux Michael L. , Fernandez Fernando R. , Mehaffey W. Hamish , Turner Ray W.
Published: November 2005

The modification of first-spike latencies by low-threshold and inactivating K+currents (IA) have important implications in neuronal coding and synaptic integration. To date, cells in which first-spike latency characteristics have been analyzed have shown that increased hyperpolarization results in longer first-spike latencies, producing a monotonic relationship between first-spike latency and membrane voltage. Previous work has established that cerebellar stellate cells express members of the Kv4 potassium channel subfamily, which underlieIAin many central neurons. Spike timing in stellate cells could be particularly important to cerebellar output, because the discharge of even single spikes can significantly delay spike discharge in postsynaptic Purkinje cells. In the present work, we studied the first-spike latency characteristics of stellate cells. We show that first-spike latency is nonmonotonic, such that intermediate levels of prehyperpolarization produce the longest spike latencies, whereas greater hyperpolarization or depolarization reduces spike latency. Moreover, the range of first-spike latency values can be substantial in spanning 20-128 ms with preceding membrane shifts of <10 mV. Using patch clamp and modeling, we illustrate that spike latency characteristics are the product of an interplay betweenIAand low-threshold calcium current (IT) that requires a steady-state difference in the inactivation parameters of the currents. Furthermore, we show that the unique first-spike latency characteristics of stellate cells have important implications for the integration of coincident IPSPs and EPSPs, such that inhibition can shift first-spike latency to differentially modulate the probability of firing.
Enhanced Susceptibility to Kainate-Induced Seizures, Neuronal Apoptosis, and Death in Mice Lacking Gangliotetraose Gangliosides: Protection with LIGA 20, a Membrane-Permeant Analog of GM1
Authors: Wu Gusheng , Lu Zi-Hua , Wang Jianfeng , Wang Yvette , Xie Xin , Meyenhofer Markus F. , Ledeen Robert W.
Published: November 2005

Knock-out (KO) mice lacking gangliotetraose gangliosides attributable to disruption of the gene for GM2/GD2 synthase [GalNAcT (UDP-N-acetylgalactosamine:GM3/GD3 β-1,4-N-acetylgalactosaminyltransferase; EC2.4.1.92)] are revealing key neural functions for the complex gangliosides of brain. This study has found such animals to be highly susceptible to kainic acid (KA)-induced seizures in terms of both seizure severity and duration. Intraperitoneal injection of 25 mg/kg KA produced status epilepticus for ∼200 min in normal mice or heterozygotes and more than four times longer in the KO mice. The latter group suffered ∼30% mortality, which increased to ∼75% at dosage of 30 mg/kg KA, compared with 10-14% for the other two genotypes at the latter dosage. Nissl staining and terminal deoxynucleotidyl transferase-mediated biotinylated UTP nick end labeling assay revealed substantial deterioration of pyramidal neurons attributable to apoptosis in the KO hippocampus, especially the CA3 region. Seizure activity in the KO mouse was only moderately diminished by intraperitoneal injection of GM1 ganglioside, whereas LIGA 20, a semisynthetic analog of GM1, substantially reduced both seizure severity and cell damage. The potency of LIGA 20 was correlated with its enhanced membrane permeability (compared with GM1), as seen in the increased uptake of [3H]LIGA 20 into the subcellular fractions of brain including cell nuclei. The latter finding is consonant with LIGA 20-induced restoration of the Na+/Ca2+exchanger located at the inner membrane of the nuclear envelope in KO mice, an exchanger dependent on tight association with GM1 or its analog for optimal activity. These results point to a neuroprotective role for GM1 and its associated exchanger in the nucleus, based on regulation of Ca2+flux between nucleoplasm and nuclear envelope.
Stoichiometry of the α9α10 Nicotinic Cholinergic Receptor
Authors: Plazas Paola V. , Katz Eleonora , Gomez-Casati María E. , Bouzat Cecilia , Elgoyhen A. Belén
Published: November 2005

The α9 and α10 nicotinic cholinergic subunits assemble to form the receptor that mediates synaptic transmission between efferent olivocochlear fibers and hair cells of the cochlea. They are the latest vertebrate nicotinic cholinergic receptor (nAChR) subunits that have been cloned, and their identification has established a distant early divergent branch within the nAChR gene family. The α10 subunit serves as a “structural” component leading to heteromeric α9α10 nAChRs with distinct properties. We now have probed the stoichiometry of recombinant α9α10 nAChRs expressed inXenopusoocytes. We have made use of the analysis of the population of receptors assembled from a wild-type subunit and its partner α9 or α10 subunit bearing a reporter mutation of a valine to threonine at position 13′ of the second transmembrane domain (TM2). Because the mutation increased the sensitivity of the receptor for acetylcholine (ACh) but mutations at different subunits were not equivalent, the number of α9 and α10 subunits could be inferred from the number of components in compound concentration-response curves to ACh. The results were confirmed via the analysis of the effects of a mutation to threonine at position 17′ of TM2. Because at this position the mutations at different subunits were equivalent, the stoichiometry was inferred directly from the shifts in the ACh EC50values. We conclude that the recombinant α9α10 receptor is a pentamer with a (α9)2(α10)3stoichiometry.
Is Monographic Tyranny the Problem?
Authors: Lewis Philip
Published: November 2005

Lindsay waters's “rescue tenure from the tyranny of the monograph“ in the 20 april 2001 chronicle of higher Education complements his “Modest Proposal […]” in PMLA. The longer Chronicle piece insistently deploys the concept of crisis that presided over a 1997 conference of humanities scholars, librarians, and editors, The Specialized Scholarly Monograph in Crisis (Case). According to Waters, the overproduction of monographs required of tenure candidates “conceals an identity crisis in the humanities that has been developing for the past thirty years […]” (B7). “Above all,” he avers, “the crisis of the monograph is a crisis in leadership” that implicates the university: “the problem of the humanities monograph is, mutatis mutandis, the problem of the university […],” an institution “increasingly committed to business values” (B8). In this university in which “the humanities have grown to be beside the point,” Waters submits, the increased stress on the tenure monograph during the eighties and nineties is the most evident symptom of an ill-conceived professionalization of the humanities.
Acquiring and Studying African Literature
Authors: Shayne Mette
Published: November 2005

martin cohen's “developments in foreign approval buying,” in the march 2001 issue of pmla, lists some of “the foreign language bibliographer's […] tricks” (393) for stocking collections. Acquiring African literature, however, is largely a different matter. The approval plans Cohen mentions, whereby “the vendor allows you to see the book [or a description of it] before you decide whether or not to add it to the collection,” would be applicable to the presses in England and France specializing in Third World literature (e.g., Heinemann in England, L'Harmattan in France), which publish primarily the most established African writers (see Maja-Pearce; Ruppert). But when it comes to publishing on the continent of Africa, even books by well-known writers (like Ngũgĩ wa Thiong'o), when written in the national languages, can only be obtained locally. And certainly all other literature has to be bought in the country of origin.
The Consolation of Physics: Tennyson's Thermodynamic Solution
Authors: Gold Barri J.
Published: November 2005

Tennyson'sIn Memoriamsuggests that poetic knowledge may precede and shape scientific knowledge. Struggling with the implications and possibilities of Victorian energy physics even as that science came into being, Tennyson anticipates not only the laws of thermodynamics but also many of the ways these ideas suffuse Victorian thought, from widespread anxieties regarding the death of the sun through religious invocations of the conservation of energy.In Memoriamat once evokes the roots of physical theory in Romantic elegy and suggests the elegiac structure and function of Victorian physical discourse; likeIn Memoriam, the laws of thermodynamics effect a reconciliation between the dissipation we observe and the conservation we crave. Moreover, as Tennyson reconceives waste as transformation in the natural world,In Memoriamalso reveals a surprising relation between energy physics and another emergent science, evolutionary biology.