bluuebunny/crossref_metadata_2025 huggingface dataset:
Effect of Heating and Massaging of Meibomian Glands on Their Imaging
Authors: Pettayil Justin E. , Haque Samya , Fardin Mohammed , Dhallu Sandeep Kaur , Travé-Huarte Sònia , Wolffsohn James S. , Dutta Debarun
Published: September 2024

Background and Objectives: Infrared light is used to image the Meibomian glands through their thermal profile. This study aimed to investigate the effects of a combination of heating and an eyelid massage on Meibomian gland visibility and tear film parameters. Materials and Methods: Twenty-four participants (26 ± 6.9 years) were enrolled in this prospective study, which involved imaging the Meibomian glands of both the lower and upper eyelid and assessing the non-invasive breakup time (NIBUT), tear meniscus height (TMH), and blink rate (using the CA-800, Topcon) at baseline after five minutes of eyelid warming followed by a five-minute eyelid massage. The second session, which was randomised in sequence, repeated the same measurements but without the inclusion of any eyelid warming or massage as the control condition. Results: While there was no change in lower lid Meibomian gland appearance as a result of eyelid heating, eyelid massage, or multiple lid eversion (median 2.0, range 0.0 to 4.0; p = 0.782), there was a change in upper lid appearance 5 min after heating and lid massage (p = 0.025), but again, multiple lid eversion had no effect (p > 0.05). The NIBUT decreased on second lid eversion (p = 0.049), although this was not evident on the third lid eversion (p = 0.090). The effect on NIBUT was also apparent with heating (p = 0.034 immediately after) but was sustained with 5 min of eyelid massage (p = 0.031). The TMH increased with heating (p < 0.001), and this effect was sustained with 5 min of eyelid massage (p = 0.011), but there was no lid eversion effect (p > 0.05). The blink rate was unaffected by heating, eyelid massage, or multiple eversions of the eyelids (median 24 blinks/min, range 8 to 59 blinks/min; p = 0.61). Conclusions: Eyelid warming can increase the visibility of the Meibomian glands, although this effect was only observed with upper lid imaging and the effect dissipated after 5 min of eyelid massage. Warming and massage also disrupt the tear film, as does multiple lid eversion, emphasising the need to use the least invasive tear film assessment techniques first.
Comparative Metabolic Profiling in Drosophila suzukii by Combined Treatment of Fumigant Phosphine and Low Temperature
Authors: Lee Junbeom , Kim Hyun-Kyung , Jeon Jong-Chan , Seok Seung-Ju , Kim Gil-Hah , Koo Hyun-Na , Lee Dae-Weon
Published: September 2024

Background/Objectives: The mechanisms of action of phosphine are diverse and include neurotoxicity, metabolic inhibition, and oxidative stress; however, its efficacy at low temperatures is unclear. Methods: Comparative metabolomics is suitable for investigating the response of the spotted-wing fly Drosophila suzukii to exposure toward a combination of cold stimuli and fumigant PH3. Results: Under this combined exposure, 52 metabolites exhibiting significant differences in stress were identified and their physiological roles were analyzed in the Drosophila metabolic pathway. Most metabolites were involved in amino acids, TCA cycle, and nucleic acids. In addition, the alteration levels of cell membrane lipids, such as glycerophospholipids, sphingolipids, and glycerolipids, clearly showed changes in the combined treatment compared to PH3 and low temperatures alone. Aconitic acid, a component of the TCA cycle, was completely inhibited by the combined treatment. Conclusions: These results suggest that treatment-specific indicators could be useful biomarkers to indicate the synergistic effects of PH3 and low temperature on energy metabolism.
Peri-Implantitis-Associated Microbiota before and after Peri-Implantitis Treatment, the Biofilm “Competitive Balancing” Effect: A Systematic Review of Randomized Controlled Trials
Authors: Di Spirito Federica , Pisano Massimo , Di Palo Maria Pia , Franci Gianluigi , Rupe Antonio , Fiorino Antonino , Rengo Carlo
Published: September 2024

This systematic review of RCTs aimed to characterize short- and long-term changes in peri-implantitis-associated microbiota (total biofilm microbial load and predominant pathogens’ counts) following (any) peri-implantitis treatment in systemically healthy, non-smoking, partially/totally edentulous adults. The study protocol, compliant with the PRISMA statement, was registered on PROSPERO (CRD42024514521) before the literature search. Data from 11 RCTs, assessed through the ROBINS-2 tool, were qualitatively synthesized. No data were retrieved on total edentulism, healthy peri-implant/periodontal sites, treated mucositis, gingivitis, and periodontitis sites. Shortly after treatment, Prevotella intermedia, Fusobacterium nucleatum, and Peptostreptococcus micros prevailed, indicating early colonization, as after implant placement. After both surgical and non-surgical approaches, although not eradicated, the peri-implant total biofilm load, red- and orange-complex species, and Aggregatibacter actinomycetemcomitans counts generally decreased for up to about three months. However, one month after treatment, red-complex species and Prevotella intermedia increased, likely due to persistent tissue-invasive bacteria, unresolved pathological conditions (high probing depth values) favoring anaerobiosis and dysbiosis, and a qualitatively and quantitatively decreased biofilm community, competing and balancing the predominant pathogens (biofilm “competitive balancing” effect), thus allowing recolonization by more virulent bacteria. Red-complex bacteria gradually leveled off to baseline at the six- and twelve-month follow-ups. Fusobacterium nucleatum remained almost unchanged after treatment.
Optimizing Diagnosis and Management of Ventilator-Associated Pneumonia: A Systematic Evaluation of Biofilm Detection Methods and Bacterial Colonization on Endotracheal Tubes
Authors: Codru Ioana Roxana , Vintilă Bogdan Ioan , Sava Mihai , Bereanu Alina Simona , Neamțu Sandra Ioana , Bădilă Raluca Maria , Bîrluțiu Victoria
Published: September 2024

Healthcare-associated infections, such as ventilator-associated pneumonia and biofilm formation on intubation cannulas, impose significant burdens on hospitals, affecting staffing, finances, and patient wellbeing, while also increasing the risk of patient mortality. We propose a research study aimed at exploring various methodologies for detecting these infections, discovered in the biofilm on medical devices, particularly tracheal cannulas, and understanding the role of each method in comprehending these infections from an etiological perspective. Our investigation also involves an analysis of the types of endotracheal tubes utilized in each case, the bacteria species identified, and strategies for combating biofilm-associated infections. The potential impact of our research is the substantial improvement of patient care through enhanced diagnosis and management of these infections.
Network Analysis of Gut Microbial Communities Reveals Key Reason for Quercetin Protects against Colitis
Authors: Lv Yanan , Peng Jing , Ma Xiaoyu , Liang Zeyi , Salekdeh Ghasem Hosseini , Ke Qunhua , Shen Wenxiang , Yan Zuoting , Li Hongsheng , Wang Shengyi , Ding Xuezhi
Published: September 2024

As one of the most representative natural products among flavonoids, quercetin (QUE) has been reported to exhibit beneficial effects on gut health in recent years. In this study, we utilized a dextran sulfate sodium (DSS)-induced colitis mice model to explore the protective effects and underlying mechanisms of QUE on colitis. Our data demonstrated that QUE oral gavage administration significantly ameliorates the symptoms and histopathological changes associated with colitis. Additionally, the concentration of mucin-2, the number of goblet cells, and the expression of tight junction proteins (such as ZO-1, Occludin, and Claudin-1) were all found to be increased. Furthermore, QUE treatment regulated the levels of inflammatory cytokines and macrophage polarization, as well as the oxidative stress-related pathway (Nrf2/HO-1) and associated enzymes. Additionally, 16S rDNA sequencing revealed that QUE treatment rebalances the alterations in colon microbiota composition (inlcuding Bacteroidaceae, Bacteroides, and Odoribacter) in DSS-induced colitis mice. The analysis of network dynamics reveals a significant correlation between gut microbial communities and microenvironmental factors associated with inflammation and oxidative stress, in conjunction with the previously mentioned findings. Collectively, our results suggest that QUE has the potential to treat colitis by maintaining the mucosal barrier, modulating inflammation, and reducing oxidation stress, which may depend on the reversal of gut microbiota dysbiosis.
Detection of Nitrate-Reducing/Denitrifying Bacteria from Contaminated and Uncontaminated Tallgrass Prairie Soil: Limitations of PCR Primers
Authors: AbuBakr Samer M. , Najar Fares Z. , Duncan Kathleen E.
Published: September 2024

Contamination of soil by spills of crude oil and oilfield brine is known to affect the species composition and functioning of soil microbial communities. However, the effect of such contamination on nitrogen cycling, an important biogeochemical cycle in tallgrass prairie soil, is less well known. Detecting nitrate-reducing (NR) and denitrifying (DN) bacteria via PCR amplification of the genes essential for these processes depends on how well PCR primers match the sequences of these bacteria. In this study, we enriched for NR and DN bacteria from oil/brine tallgrass prairie soil contaminated 5–10 years previously versus those cultured from uncontaminated soil, confirmed the capacity of 75 strains isolated from the enrichments to reduce nitrate and/nitrite, then screened the strains with primers specific to seven nitrogen cycle functional genes. The strains comprised a phylogenetically diverse group of NR and DN bacteria, with proportionately more γ-Proteobacteria in oil-contaminated sites and more Bacilli in brine-contaminated sites, suggesting some residual effect of the contaminants on the NR and DN species distribution. Around 82% of the strains shown to reduce nitrate/nitrite would not be identified as NR and DN bacteria by the battery of NR and DN primers used. Our results indicate an urgent need to expand the NR/DN functional gene primer database by first identifying novel NR/DN strains through their capacity to reduce nitrate/nitrite.
A Causal Relationship between Type 2 Diabetes and Candidiasis through Two-Sample Mendelian Randomization Analysis
Authors: Xiong Juan , Lu Hui , Jiang Yuanying
Published: September 2024

The potential relationship between type 2 diabetes (T2D) and candidiasis is of concern due to the respective characteristics of these conditions, yet the exact causal link between the two remains uncertain and requires further investigation. In this study, the inverse-variance-weighted (IVW) analysis indicated a significant genetic causal relationship between T2D and candidiasis (p = 0.0264, Odds Ratio [OR], 95% confidence interval [CI] = 1.1046 [0.9096–1.2996]), T2D (wide definition) and candidiasis (p = 0.0031, OR 95% [CI] = 1.1562 [0.8718–1.4406]), and severe autoimmune T2D and candidiasis (p = 0.0041, OR 95% [CI] = 1.0559 [0.9493–1.1625]). Additionally, the MR-Egger analyses showed a significant genetic causal relationship between T2D (wide definition) and candidiasis (p = 0.0154, OR 95% [CI] = 1.3197 [0.7760–1.8634]). The weighted median analyses showed a significant genetic causal relationship between severe autoimmune T2D and candidiasis (p = 0.0285, OR 95% [CI] = 1.0554 [0.9498–1.1610]). This Mendelian randomization (MR) study provides evidence for a genetic correlation between T2D and candidiasis.
Effects of Trichoderma harzianum on Growth and Rhizosphere Microbial Community of Continuous Cropping Lagenaria siceraria
Authors: Wang Jinlei , Mu Hongmei , Liu Shan , Qi Saike , Mou Saifeng
Published: September 2024

This study analyzed the effects of Trichoderma harzianum on the growth of continuous cropping Lagenaria siceraria and the physical and chemical properties of rhizosphere soil and microbial community structure, using Illumina Miseq (PE300) high-throughput sequencing technology along with physiological and biochemical detection. The results indicated that after applying T. harzianum, the growth of L. siceraria was significantly promoted, with increases in plant height, fresh weight, and dry weight of 21.42%, 24.5%, and 4.5%, respectively. The pH of the rhizosphere soil decreased from 7.78 to 7.51, while the electrical conductivity, the available phosphorus, the available potassium, and the total nitrogen were markedly higher compared to the control group and increased by 13.95%, 22.54%, 21.37%, and 16.41%, respectively. The activities of catalase and sucrase in the rhizosphere increased by 18.33% and 61.47%, and the content of soil organic carbon (SOC) increased by 27.39%, which indicated that T. harzianum could enhance soil enzyme activity and promotes the transformation of organic matter. The relative abundance of beneficial bacteria such as Pseudomonas increased, while the relative abundance of harmful fungi such as Fusarium and Podosphaera decreased significantly.
Exploring the Genetic Diversity of Mycoplasma hyopneumoniae in Pigs with Pneumonia and Pleurisy at Slaughter
Authors: Panneitz Ana Karolina , Braga Eduarda Ribeiro , Petri Fernando Antonio Moreira , Menegatt Jean Carlo Olivo , Driemeier David , Maes Dominiek , Oliveira Luís Guilherme de
Published: September 2024

Mycoplasma (M.) hyopneumoniae is the key pathogen of the porcine respiratory disease complex (PRDC) and contributes to pleurisy in pigs. Due to its limited metabolism and laborious cultivation, molecular tools are useful for diagnosis. This study investigated the genetic diversity of M. hyopneumoniae in slaughter pigs with pneumonia and pleurisy, and it assessed co-infections by Pasteurella multocida type A (PM), Actinobacillus pleuropneumoniae (APP), and swine influenza virus A (sIVA). Lungs (n = 70) with different pleurisy scores and lesions compatible with M. hyopneumoniae infection were collected for convenience. Macroscopic and microscopic evaluations were performed. M. hyopneumoniae was detected using qPCR, and MLST was used for genetic characterization. Co-infections with PM and APP were also evaluated by qPCR, while the immunohistochemistry assessed sIVA infection. All lungs were positive for M. hyopneumoniae. Histopathology confirmed M. hyopneumoniae-associated lesions. MLST characterization was possible in 25 lungs and revealed 10 distinct allelic profiles, with none matching known sequence types in the public database. Co-infections were detected in 40% of the samples with APP and 32% with PM, with 12% showing both pathogens and 52% of the samples presenting microscopic lesions compatible with sIVA infection. The diverse genetic profiles found underscore the need for research on isolation and potential pathogenic variations.
Electrolyzed Water Treatment for the Control of the Zoonotic Pathogen Vibrio vulnificus in Aquaculture: A One Health Perspective
Authors: Ibányez-Payá Pablo , Blasco Adolfo , Ros-Lis José V. , Fouz Belén , Amaro Carmen
Published: September 2024

Vibrio vulnificus (Vv) is a bacterial pathogen native to warm and brackish water ecosystems that can cause fatal septicemia (Vv-vibriosis) in humans and various farmed fish species. From a One Health perspective, controlling Vv-vibriosis outbreaks on farms is essential not only for animal but also for human health, as it reduces the risk of Vv transmission to humans. Electrolyzed water (EW) is a sustainable control method, exhibiting transient disinfectant properties due to the formation of hypochlorous acid (HOCl). We hypothesized that EW could effectively reduce Vv populations in aquaculture facilities, preventing outbreak emergence. To test this hypothesis, survival assays in EW were conducted under varying conditions of salinity, pH, and free available chlorine (FAC). The results indicated that an intermediate concentration of FAC had a significant bactericidal effect on Vv populations regardless of the condition and tested strain. Consequently, the strategic use of EW could serve as an eco-friendly preventive and control measure against Vv-vibriosis by significantly decreasing the bacterial load in farm water.
In Vitro Digestion of Vacuum-Impregnated Yam Bean Snacks: Pediococcus acidilactici Viability and Mango Seed Polyphenol Bioaccessibility
Authors: Durán-Castañeda Alba Cecilia , Bueno-Durán Adela Yolanda , Girón-Pérez Manuel Iván , Ragazzo-Sánchez Juan Arturo , Sánchez-Burgos Jorge Alberto , Sáyago-Ayerdi Sonia Guadalupe , Zamora-Gasga Victor Manuel
Published: September 2024

This study investigates the in vitro digestion of vacuum-impregnated yam bean snacks enriched with Pediococcus acidilactici and mango seed polyphenols, focusing on bacterial survival and polyphenol bioaccessibility. The snacks were prepared by vacuum impregnation (VI) with solutions containing either mango seed extract, P. acidilactici, or a combination of both, followed by dehydration. The antimicrobial activity of the treatments was assessed against pathogens, revealing limited effectiveness, likely due to insufficient concentrations of mango seed extract and the intrinsic resistance of the bacteria. VI of mango seed extract improved the total soluble phenols (TSP) content up to 400% and maintained the initial probiotic concentration (106 cell/mL). In vitro digestion was performed to simulate gastrointestinal conditions, measuring the stability of TSP and the survival of P. acidilactici. The results indicated that the viability of P. acidilactici fluctuated throughout the digestion process (106 to 104 log UFC/g), the polyphenols showed varying degrees of bioaccessibility (11 to 30%), and the TSP content in the intestinal fraction ranged from 1.95 to 6.54 mg GAE/g. The study highlights the potential of VI for incorporating functional components into plant-based snacks, though further optimization is necessary to enhance the stability of P. acidilactici and the effectiveness of the bioactive ingredients.
Wolbachia Natural Infection of Mosquitoes in French Guiana: Prevalence, Distribution, and Genotyping
Authors: Clervil Emmanuelle , Guidez Amandine , Talaga Stanislas , Carinci Romuald , Gaborit Pascal , Lavergne Anne , Tirera Sourakhata , Duchemin Jean-Bernard
Published: September 2024

Wolbachia are the most spread bacterial endosymbionts in the world. These bacteria can manipulate host reproduction or block virus transmission in mosquitoes. For this reason, Wolbachia-based strategies for vector control are seriously considered or have already been applied in several countries around the world. In South America, Wolbachia have been studied in human pathogen vectors such as sand flies and mosquitoes. In French Guiana, the diversity and distribution of Wolbachia are not well known in mosquitoes. In this study, we screened for Wolbachia natural infection in mosquitoes in French Guiana by using 16S rRNA, Wolbachia surface protein (WSP), and multi-locus sequence typing (MLST) molecular assays. A total of 29 out of 44 (65.9%) mosquito species were positive for natural Wolbachia infection according to the PCR results, and two Wolbachia strains co-infected three specimens of Mansonia titillans. Then, we analyzed the phylogenetic relationships among the Wolbachia detected. All of the tested specimens of Aedes aegypti, the major dengue vector of French Guiana, were negative. These results regarding Wolbachia strain, distribution, and prevalence in mosquitoes from French Guiana highlight Wolbachia–mosquito associations and pave the way for a future Wolbachia-based strategy for vector control in this Amazonian territory.
Seasonal and Distributional Changes in the Composition and Flux of Anthropogenic Microparticles in the Surface Waters of the Charles River, Massachusetts, United States
Authors: Mabry Lee , Urban-Rich Juanita
Published: September 2024

Plastic is a growing global environmental problem. While much of the focus of anthropogenic microparticles has focused on microplastics and their occurrence in marine systems, anthropogenic microparticles are found in freshwater systems. The Charles River is a highly impacted and historically important river within Massachusetts and runs for 80 miles within the state of MA through a variety of land uses. Microparticle concentrations were found to vary along the length of the river and ranged in concentrations from 1–19 pieces/L, with generally higher concentrations downstream. Microfibers were the dominant (72%) type of microparticles found, and the majority (avg 76%) of microparticles were synthetic. The highest estimated flux of microparticles occurred in May, with an estimated flux of 2 billion microparticles per day via the Charles River into the Boston Harbor. The average annual concentration of microparticles was correlated with land use, with higher concentrations occurring in regions with higher impervious coverage and in areas designated as industrial or high-density residential. Polyester, polypropylene, and polyamides were the dominant plastic polymers. However, seasonal changes in the relative importance of each polymer, along with changes in the abundance and flux rates, indicate that there would be seasonal variability in the type of microparticles exported. Changes in composition occurred between stations and between the head and mouth of the river, suggesting particle retention due to either deposition, degradation, or biological consumption.
Microplastics in Farmed Animals—A Review
Authors: Lackner Maximilian , Branka Manuela
Published: September 2024

Environmental pollution from plastics has become one of the biggest concerns globally. Microplastics (MPs) are plastic materials less than 5 mm in size. They remain in the environment for hundreds to thousands of years without degrading, only breaking down further to nanoplastics (NPs). Micro- and nanoplastics can be the origin of many diseases and can carry various pathogenic substances on their surface and spread them throughout the biosphere, starting with contained additives and ending with adsorbed toxins from the environment and potentially pathogenic microorganisms. Exposure routes for humans and animals are through air, water and food/feed. Due to the placement of livestock—including ruminants, fish and poultry—and humans at the top of the food web, any pollution in water, air or soil can eventually be transferred to livestock and from livestock to humans. The presence of microplastics in the intestines of aquaculture species, ruminants and poultry, for instance, was found to cause a change in the intestinal microbial population and, as a result, the occurrence of diseases. These particles have also been observed in other organs such as liver, kidneys, lung, spleen, heart, ovaries, and testicles of animals, which causes biochemical changes, structural destruction, and malfunction. While the complete extent of the negative health impacts of microplastics remains still largely unknown, their ubiquitous presence and the transmission of chemicals from microplastics to organisms is a notable issue, underscoring the importance of gaining a more comprehensive understanding of the potential threats posed by microplastics to animal and ultimately human health, coupled with a need for drastic reduction of the plastic freight into the environment. This review article summarizes recent findings on the effect of micro- and nanoplastics on farmed animals and, ultimately, on humans. Action is needed to reduce the number of microplastics to which farmed animals, and thereby humans, are exposed.
Peak Height Comparison K-Ar Method Applied to Zao Volcano Bomb Samples Younger than ca. 35 ka
Authors: Takebe Mirai , Sato Keiko , Kumagai Hidenori , Iwata Naoyoshi , Ban Masao
Published: September 2024

The peak height comparison K-Ar dating method was applied to very young (younger than ca. 35 ka) vesiculated bombs from three pyroclastic units (Komakusadaira Pyroclastics, Kattadake Pyroclastics, and Umanose Agglutinate) from Zao Volcano in northeast Japan. Because the 38Ar/36Ar ratios differed from 0.187, the mass fractionation was corrected for all measurement data. The obtained K-Ar ages are 30.0 ± 32.2 ka (no. 1-1, weakly vesiculated), 37.4 ± 64.8 ka, and 33.0 ± 58.0 ka (nos. 2-1, 2-2, weakly vesiculated) for the samples from Komakusadaira Pyroclastics; 12.6 ± 46.7 ka (no. 3-1, highly vesiculated) for a sample from Kattadake Pyroclastics; and 5.3 ± 44.9 ka, 5.7 ± 14.3 ka (no. 4-1, 4-2, weakly vesiculated), and 17.3 ± 79.3 ka (no. 5-1, moderately vesiculated) for the samples from Umanose Agglutinate on a 1σ error basis. For all cases, the obtained ages’ errors exceed 100%, with none involved within the error range. Therefore, the following age value upper limits are considered statistically significant: no. 1-1 is ≤94.4 ka, 2-1 is ≤167.0 ka, 2-2 is ≤149.0 ka, 3-1 is ≤106.0 ka, 4-1 is ≤95.1 ka, 4-2 is ≤34.3 ka, and 5-1 is ≤175.9 ka, considering 2σ errors. The obtained ages are generally consistent with those previously estimated using 14C dating.
Diagenesis Variation in Different Distributary Channels of Shallow Water Lacustrine Delta Deposits and Implication for High-Quality Reservoir Prediction: A Case Study in the Chang 8 Member in Caijiamiao Area, Sw Ordos Basin, China
Authors: Bi Xiaolong , Wang Yiping , Tang Xiao , Luo Weiyun , Hao Chenxi , Hou Mingqiu , Zhang Li
Published: September 2024

Tight oil reservoirs are considered important exploration targets in lacustrine basins. High-quality reservoir prediction is difficult as the reservoirs have complex distributions of depositional facies and diagenesis processes. Previous research has found that the diagenesis process of tight oil sandstones varies greatly in different depositional facies. However, diagenesis variation in different depositional facies is still poorly studied, especially in distributary channels of shallow water delta deposits in lacustrine basins. Based on the description of core samples, the observation of rock slices, the interpretation of well logging data, and the analysis of porosity and permeability data, the differences in the lithofacies types, diagenesis processes, and pore structures of different distributary channels have been clarified. Ultimately, a model of diagenesis and reservoir heterogeneity distribution in the shallow-water delta of Chang 8 Member of the Yanchang Formation in the Caijiamiao area of the Ordos Basin has been established. This research indicates that the main distributary channels in the study area are dominated by massive bedding sandstone lithofacies, while the secondary distributary channels are primarily characterized by cross-bedding sandstone lithofacies. There are significant differences in the compaction, dissolution, and cementation of authigenic chlorite and carbonate among different parts of the distributary channels. Plastic mineral components, such as clay and mica, are abundant in sheet sands, and are more influenced by mechanical and chemical compaction. Influenced by the infiltration of meteoric water and hydrocarbon generation, dissolution pores are relatively well-developed in the underwater distributary channel reservoirs. A large amount of carbonate cementation, such as calcite and siderite, is found within the sandstone at the interface between sand and mud. The occurrence of authigenic chlorite exhibits a clear sedimentary microfacies zonation, but there is little difference in the kaolinite and siliceous cementation among different microfacies reservoirs. Finally, a model of diagenetic differences and reservoir quality distribution within dense sand bodies has been established. This model suggests that high-quality reservoirs are primarily developed in the middle of distributary channels, providing a theoretical basis for the further fine exploration and development of oil and gas in the study area.
Mineralogy and Geochemistry of Upper Miocene Igneous Rocks, Kos Island, Greece: Extension during Strike-Slip Faulting and Subduction Rollback
Authors: Pe-Piper Georgia , Piper David J. W. , Tsoukalas Nikolaos
Published: September 2024

Upper Miocene volcanic and plutonic rocks on Kos island preserve a record of magmatic and tectonic events in the transition zone between the Aegean and Anatolian microplates. Their field setting, syn-intrusion deformation, mineralogy, and geochemistry were investigated. Volcanic rocks, including trachyandesite flows and trachyandesite to rhyolite domes, were extruded on a central E–W horst and directly overlie Alpine basement. Thick successions of trachytic flow tuffs are interbedded with fluvial and lacustrine basinal sediments to the south of this horst. Volcanism was synchronous with the emplacement of the Dikeos monzonite pluton, which is geochemically similar to some lithic clasts in the thick flow tuffs and is cut by mafic dykes including lamprophyres. Two main types of mafic magma were present: a K-rich lamprophyric magma that evolved to trachyandesite and more calc-alkaline magma similar to mafic enclaves in the monzonite. Syn-intrusion structures in the monzonite indicate emplacement during E–W sinistral strike-slip faulting that created local transtensional deformation, providing accommodation for a Dikeos magma reservoir. A change in the style of deformation in the Late Miocene led to NW-striking extension in the footwall, occupied by mafic dykes and mineralized veins, and extensional detachment of the hanging wall, resulting in unroofing of the monzonite.
Geochronology and Origin of Quaternary Dacites from the Daliuchong Volcano in the Tengchong Volcanic Field (TVF), SE Tibetan Plateau
Authors: Tong Jie , Zou Haibo , Guo Zipei , Chang Liwen , Wang Lizhu , Zhao Yongwei
Published: September 2024

Quaternary volcanoes from the southeastern Tibetan Plateau occur at the Tengchong volcanic field (TVF). The Daliuchong volcano is the largest volcano in the TVF, which has the most felsic compositions with explosive eruptions. The eruption history and origin of the Daliuchong volcano are a matter of debate. In the present paper, we report the groundmass K-Ar ages, whole-rock Sr-Nd-Pb-Hf isotopes, zircon U-Pb ages, and Hf-O isotopic compositions for the Daliuchong volcano to constrain its eruption history and petrogenesis. The groundmass K-Ar ages and zircon U-Pb ages indicate mid-Pleistocene (0.6 Ma to 0.3 Ma) eruptions. The presence of zircon phenocrysts with enriched mantle-like O-Hf isotopes (δ18O < 6‰, and εHf about −2) suggests the involvement of mantle-derived basaltic magmas. The whole-rock Pb isotope compositions and Sr-Nd isotope modeling reveal the involvement of magma from the lower crust. The zircon xenocrysts reveal previously unrecognized 20-Ma magmatic activity at the TVF and contamination of late Cretaceous (66–80 Ma) S-type granites during the formation of the Daliuchong dacites. The dacite magma at Daliuchong was formed by mixing of the mantle-derived magma and lower-crust-derived magma and subsequently contaminated by upper crustal materials, including late Cretaceous S-type granitic rocks.
Analysis of Liquefaction in Tailings Deposits by Fem Modeling of Undrained Cyclic Triaxial
Authors: Reyes Alan , Bravo Joaquín , Gallardo-Sepúlveda Ricardo , Oviedo-Veas Jorge Eduardo , Díaz-Segura Edgar Giovanny
Published: September 2024

In this article, a numerical calibration procedure for undrained cyclic triaxial tests is presented to evaluate the liquefaction potential in sand and silt samples from mining tailings in northern Chile. The numerical modeling of an axisymmetric specimen involved two stages: isotropic consolidation using the Hardening Soil Small (HSS) model and a cycling phase employing the UBC3D-PLM model to simulate the onset of liquefaction using the criterion that the excess pore pressure ratio Ru should exceed 0.8. The results demonstrate that the UBC3D-PLM modeling calibrated with experimental data from cyclic triaxial tests effectively represents the excess pore pressure in both sandy and silty soils from mining tailings. The accuracy of the modeling decreases when a single set of parameters is applied to the same soil at different cyclic stress ratios (CSR), highlighting the need for specific calibrations for each loading.
Characterization of Traditional Pottery Artifacts from Yucatán Peninsula, México: Implications for Manufacturing Process Based on Elemental Analyses
Authors: Pérez Miguel , de Lucio Oscar G. , Sobral Hugo M. , Márquez-Herrera Ciro , Goguitchaichvili Avto , Ortiz Soledad
Published: September 2024

The present work is focused on developing and implementing a minimally invasive methodology for material characterization of traditional pottery from Yucatan, México. The developed methodology, which combines elemental (X-ray fluorescence spectroscopy (XRF), inductively coupled plasma-optical emission spectroscopy (ICP-OES), and Laser-Induced Breakdown Spectroscopy (LIBS)) and molecular (fiber optic reflectance spectroscopy (FORS)) spectroscopic analytical techniques, allowed for the characterization of contemporary pottery objects manufactured following traditional recipes in the town of Uayma, Yucatán, México and raw materials associated with the pottery manufacturing process. The results allowed us to detect and estimate the number of selected elements and helped to infer the presence of complex materials such as iron oxides, aluminosilicates, and calcium carbonate. Additionally, the analysis indicated two pottery groups separated by their elemental and molecular composition, corresponding to the sources of raw materials employed by the potters. It confirmed the absence of toxic compounds in ceramic objects, a significant concern for potters, as some objects are intended for domestic use. The research findings provide reassurance about the safety of these products.
Carbohydrate-Binding Mechanism of the Coagulant Lectin from Moringa oleifera Seeds (cMoL) Is Related to the Dimeric Protein Structure
Authors: de Barros Matheus Cavalcanti , de Oliveira Ana Patrícia Silva , dos Santos Franciane Gonçalves , Silva Fabiana Aparecida Cavalcante , Menezes Thais Meira , Seabra Gustavo de Miranda , Yoneda Juliana Sakamoto , Coelho Luana Cassandra Breitenbach Barroso , Macedo Maria Lígia Rodrigues , Napoleão Thiago Henrique , Lima Thâmarah de Albuquerque , Neves Jorge Luiz , Paiva Patrícia Maria Guedes
Published: September 2024

This study characterized the binding mechanisms of the lectin cMoL (from Moringa oleifera seeds) to carbohydrates using spectroscopy and molecular dynamics (MD). The interaction with carbohydrates was studied by evaluating lectin fluorescence emission after titration with glucose or galactose (2.0–11 mM). The Stern–Volmer constant (Ksv), binding constant (Ka), Gibbs free energy (∆G), and Hill coefficient were calculated. After the urea-induced denaturation of cMoL, evaluations were performed using fluorescence spectroscopy, circular dichroism (CD), and hemagglutinating activity (HA) evaluations. The MD simulations were performed using the Amber 20 package. The decrease in Ksv revealed that cMoL interacts with carbohydrates via a static mechanism. The cMoL bound carbohydrates spontaneously (ΔG < 0) and presented a Ka on the order of 102, with high selectivity for glucose. Protein–ligand complexes were stabilized by hydrogen bonds and hydrophobic interactions. The Hill parameter (h~2) indicated that the binding occurs through the cMoL dimer. The loss of HA at urea concentrations at which the fluorescence and CD spectra indicated protein monomerization confirmed these results. The MD simulations revealed that glucose bound to the large cavity formed between the monomers. In conclusion, the biotechnological application of cMoL lectin requires specific methods or media to improve its dimeric protein structure.
Fabrication of a Heptapeptide-Modified Poly(glycidyl Methac-Rylate) Nanosphere for Oriented Antibody Immobilization and Immunoassay
Authors: Gong Xiaoxing , Zhang Jie , Zhu Liyan , Bai Shu , Yu Linling , Sun Yan
Published: September 2024

Oriented antibody immobilization has been widely employed in immunoassays and immunodiagnoses due to its efficacy in identifying target antigens. Herein, a heptapeptide ligand, HWRGWVC (HC7), was coupled to poly(glycidyl methacrylate) (PGMA) nanospheres (PGMA-HC7). The antibody immobilization behavior and antigen recognition performance were investigated and compared with those on PGMA nanospheres by nonspecific adsorption and covalent coupling via carbodiimide chemistry. The antibodies tested included bovine, rabbit, and human immunoglobulin G (IgG), while the antigens included horseradish peroxidase (HRP) and β-2-Microglobulin (β2-MG). The nanospheres were characterized using zeta potential and particle size analyzers, scanning electron microscopy, transmission electron microscopy, Fourier transform infrared spectroscopy, and reversed-phase chromatography, proving each synthesis step was succeeded. Isothermal titration calorimetry assay demonstrated the strong affinity interaction between IgG and PGMA-HC7. Notably, PGMA-HC7 achieved rapid and extremely high IgG adsorption capacity (~3 mg/mg) within 5 min via a specific recognition via HC7 without nonspecific interactions. Moreover, the activities of immobilized anti-HRP and anti-β2-MG antibodies obtained via affinity binding were 1.5-fold and 2-fold higher than those of their covalent coupling counterparts. Further, the oriented-immobilized anti-β2-MG antibody on PGMA-HC7 exhibited excellent performance in antigen recognition with a linear detection range of 0–5.3 μg/mL, proving its great potential in immunoassay applications.
Optimization of Ultrasonic-Assisted Extraction, Characterization and Antioxidant and Immunoregulatory Activities of Arthrospira platensis Polysaccharides
Authors: Wang Na , Qin Jingyi , Chen Zishuo , Wu Jiayi , Xiang Wenzhou
Published: September 2024

This study aimed to enhance the ultrasonic-assisted extraction (UAE) yield of seawater Arthrospira platensis polysaccharides (APPs) and investigate its structural characteristics and bioactivities. The optimization of UAE achieved a maximum crude polysaccharides yield of 14.78%. The optimal extraction conditions were a liquid–solid ratio of 30.00 mL/g, extraction temperature of 81 °C, ultrasonic power at 92 W and extraction time at 30 min. After purification through cellulose DEAE-52 and Sephadex G-100 columns, two polysaccharide elutions (APP-1 and APP-2) were obtained. APP-2 had stronger antioxidant and immunoregulatory activities than APP-1, thus the characterization of APP-2 was conducted. APP-2 was an acidic polysaccharide consisting of rhamnose, glucose, mannose and glucuronic acid at a ratio of 1.00:24.21:7.63:1.53. It possessed a molecular weight of 72.48 kDa. Additionally, APP-2 had linear and irregular spherical particles and amorphous structures, which contained pyranoid polysaccharides with alpha/beta glycosidic bonds. These findings offered the foundation for APP-2 as an antioxidant and immunomodulator applied in the food, pharmaceutical and cosmetic industries.
Effects of Varying Nano-Montmorillonoid Content on the Epoxy Dielectric Conductivity
Authors: Cheng Yujia , Yu Guang
Published: September 2024

This study investigates the correlation between the interface structure and macroscopic dielectric properties of polymer-based nanocomposite materials. Utilizing bisphenol-A (BPA) epoxy resin (EP) as the polymer matrix and the commonly employed layered phyllosilicate montmorillonoid (MMT) as the nanometer-scale dispersive phase, nano-MMT/EP composites were synthesized using composite technology. The microstructure of the composite samples was characterized through XRD, FTIR, SEM, and TEM. Changes in the morphology of the nanocomposite interface were observed with varying MMT content, subsequently impacting dielectric polarization and loss. Experimental measurements of the dielectric spectrum of the nano-MMT/EP were conducted, and the influence of the material interface, at different nano-MMT contents, on the dielectric relaxation was analyzed. The study delves into the effect of the nanocomposite interface structure on ion dissociation and migration barriers, exploring the ionic conductivity of nano-MMT/EP. Lastly, an analysis of the impact of different nano-MMT contents on the dielectric conductivity is presented. From the experimental results, the arranging regularity of polymer molecules in the interface area raises. In the matrix, the ion migration barriers decrease significantly. The higher the MMT content in the interface, the lower the migration barrier is. Until the MMT content exceeds the threshold, the agglomerated micro-particles form, which decreases the polymers’ space distribution regularity, and the ions migration barrier raises. According to the changes in the rule of the ions migration barrier with the composite interface structure content, the reason for dielectric conductivity changes can be judged.
Quinoxaline 1,4-di-N-oxide Derivatives as New Antinocardial Agents
Authors: Palos Isidro , González-González Alonzo , Paz-González Alma D. , Espinoza-Hicks José C. , Bandyopadhyay Debasish , Paniagua-Castro Norma , Galeana-Salazar Marlene S. , Castañeda-Sánchez Jorge Ismael , Luna-Herrera Julieta , Rivera Gildardo
Published: September 2024

Mycetoma is currently considered as a neglected tropical disease. The incidence of mycetoma is unknown but most of the worldwide cases are present in the “mycetoma belt” including countries like Mexico, India, Senegal, and others. The treatment of mycetoma depends on the etiological agent responsible for the case. Treatment success reaches 60 to 90%; however, common treatment has been reported to be ineffective in some cases, due in part to resistance to the prescribed antibiotics. Therefore, it is necessary to develop new therapeutic options. In the past two decades, quinoxaline derivatives have shown relevance as antibacterial agents. Therefore, in this work, esters of quinoxaline 1,4-di-N-oxide derivatives were evaluated in vitro against the reference strain CECT-3052 from N. brasiliensis, six clinical isolates, and macrophages J774A.1 to determine their cytotoxicity and security index. Additionally, nine reference drugs were evaluated as controls. The results show that nine esters of quinoxaline 1,4-di-N-oxide derivatives had a minimum inhibitory concentration (MIC) < 1 µg/mL against the reference strain and four of them (N-05, N-09, N-11, and N-13) had an MIC < 1 µg/mL against the clinical isolates. Therefore, the scaffold quinoxaline 1,4-di-N-oxide could be used to develop new and more potent antinocardial agents.
Quantum Cone—A Nano-Source of Light with Dispersive Spectrum Distributed along Height and in Time
Authors: Medvids Arturs , Ščajev Patrik , Hara Kazuhiko
Published: September 2024

We study a quantum cone, a novel structure composed of multiple quantum dots with gradually decreasing diameters from the base to the top. The dot distribution leads to a dispersive radiated spectrum. The blue edge of the spectrum is determined by the quantum confinement of excitons on top of the cones, while the red edge is determined by the bandgap of a semiconductor. We observe the kinetics of photoluminescence by obeying the stretch-exponential law from quantum cones formed on the surface of diamond-like carbon (DLC). They are explained by an increase in the lifetime of excitons along the height of the cone from the top to the base of the cone and an increasing concentration of excitons at the base due to their drift in the quasi-built-in electric field of the quantum cone. The possible visualization of the quantum cone tops of DLC using irradiation by a UV light source is shown. A quantum cone is an innovative nano-source of light because it substitutes for two elements in a conventional spectrometer: a source of light and a dispersive element—an ultrafast monochromator. These features enable the building of a nano-spectrometer to measure the absorbance spectra of virus and molecule particles.
Investigation into the Simulation and Mechanisms of Metal–Organic Framework Membrane for Natural Gas Dehydration
Authors: Song Qingxiang , Liu Pengxiao , Zhang Congjian , Ning Yao , Pi Xingjian , Zhang Ying
Published: September 2024

Natural gas dehydration is a critical process in natural gas extraction and transportation, and the membrane separation method is the most suitable technology for gas dehydration. In this paper, based on molecular dynamics theory, we investigate the performance of a metal–organic composite membrane (ZIF-90 membrane) in natural gas dehydration. The paper elucidates the adsorption, diffusion, permeation, and separation mechanisms of water and methane with the ZIF-90 membrane, and clarifies the influence of temperature on gas separation. The results show that (1) the diffusion energy barrier and pore size are the primary factors in achieving the separation of water and methane. The diffusion energy barriers for the two molecules (CH4 and H2O) are ΔE(CH4) = 155.5 meV and ΔE(H2O) = 50.1 meV, respectively. (2) The ZIF-90 is more selective of H2O, which is mainly due to the strong interaction between the H2O molecule and the polar functional groups (such as aldehyde groups) within the ZIF-90. (3) A higher temperature accelerates the gas separation process. The higher the temperature is, the faster the separation process is. (4) The pore radius is identified as the intrinsic mechanism enabling the separation of water and methane in ZIF-90 membranes.
Non-Coding RNA as a Biomarker in Lung Cancer
Authors: Suri Chahat , Swarnkar Shashikant , Bhaskar LVKS , Verma Henu Kumar
Published: September 2024

Introduction: Lung cancer remains one of the most prevalent and deadly cancers globally, with high mortality rates largely due to late-stage diagnosis, aggressive progression, and frequent recurrence. Despite advancements in diagnostic techniques and therapeutic interventions, the overall prognosis for lung cancer patients continues to be dismal. Method: Emerging research has identified non-coding RNAs (ncRNAs), including microRNAs, long non-coding RNAs, and circular RNAs, as critical regulators of gene expression, significantly influencing cancer biology. These ncRNAs play pivotal roles in various aspects of lung cancer pathogenesis, including tumor initiation, progression, metastasis, and resistance to therapy. Results: We provide a comprehensive analysis of the current understanding of ncRNAs in lung cancer, emphasizing their potential as biomarkers for early diagnosis, prognostication, and the prediction of the therapeutic response. We explore the biological functions of ncRNAs, their involvement in key oncogenic pathways, and the molecular mechanisms by which they modulate gene expression and cellular processes in lung cancer. Furthermore, this review highlights recent advances in ncRNA-based diagnostic tools and therapeutic strategies, such as miRNA mimics and inhibitors, lncRNA-targeted therapies, and circRNA-modulating approaches, offering promising avenues for personalized medicine. Conclusion: Finally, we discuss the challenges and future directions in ncRNA research, including the need for large-scale validation studies and the development of efficient delivery systems for ncRNA-based therapies. This review underscores the potential of ncRNAs to revolutionize lung cancer management by providing novel diagnostic and therapeutic options that could improve patient outcomes.