bluuebunny/crossref_metadata_2025 huggingface dataset:
Key programmatic and policy considerations for introducing multipurpose prevention (MPT) methods: reflections from healthcare providers and key stakeholders in South Africa
Authors: Kutywayo Alison , Mataboge Paballo , Mthimkhulu Nqaba , Martin Catherine E. , Muhwava Lorrein S. , Mazibuko Mbali , Makalela Nthabiseng , Kwatsha Khanyiswa , Butler Vusile , Mullick Saiqa
Published: February 2024

Introduction

Multipurpose prevention technologies (MPTs) simultaneously prevent HIV, other sexually transmitted infections, and/or unintended pregnancy. Key gatekeepers, [healthcare providers (HCPs) and key stakeholders] require proactive engagement before product implementation. This manuscript identifies HCP demand creation strategies, key stakeholder considerations for the adoption of MPTs in South Africa.

Methods

Formative research was conducted in three districts in three South African provinces (July to November 2022). Nurses initiating oral PrEP at facility and mobile study sites participated in 4-hour participatory workshops, exploring HIV prevention, including MPTs, demand creation strategies, and preferred MPTs training packages. Activities were observed, transcribed, and thematically analysed. Five online in-depth interviews (IDIs) with Key informants (KIs) (National/district programme implementers and technical leads) and one in person, exploring key programmatic and policy considerations for MPT adoption. IDIs were approximately 40 min long, audio recorded, transcribed, and thematically analysed.

Results

Twenty-one Professional Nurses completed workshops: 19 female. Six IDIs were conducted with 4 Facility Managers, 1 NDoH representative and 1 DoH Provincial Deputy Director. All participants were females, aged 30–60+ years with >10 years' in SRH/HIV policy/advocacy/research. Community conversations and information at the clinic were the best MPT demand creation methods among HCPs. KIs identified five considerations for future MPT implementation: HCP training; demand creation and messaging; existing PrEP policy amendments; preparing users for additional choice; and sustaining MPT provision.

Conclusion

Contraceptive implant and oral PrEP implementation lessons learned should be proactively considered when preparing for MPT introduction. HCP training and demand creation are of particular importance before MPT introduction.
The value of organ and tissue biovigilance: a cross-sectional analysis
Authors: Navarro Aurora , Len Oscar , Muñiz-Diaz Eduardo , Vives Corrons Joan-Lluis , Dominguez-Gil Beatriz , Vilarrodona Anna , Tort Jaume
Published: February 2024

Introduction

Biovigilance (BV) systems aim to improve the quality and safety of tissues and organs for transplantation. This study describes the Catalan BV system and analyzes its utility.

Methods

It is a retrospective analysis of notifications on serious adverse events (SAEs) and reactions (SARs) since the implementation of the BV system (2008 for tissues and 2016 for organs) until 2020. Variables are presented to describe the most common critical steps of the pathway and complications associated with the quality and safety of tissues and organs.

Results

A total of 154 and 125 notifications were reported to the Tissue and the Organ BV systems, respectively. Most SAEs were related to unexpected donor diseases and implemented actions were assured on those deemed preventable. Regarding SARs, donor-transmitted infections and malignancies (only organs) were the most common, followed by graft failure (tissues) and process-related (organs). The incidence of SAEs and SARs related to tissue was 3.44‰ and 0.22‰, respectively. The corresponding figures for organs were 31.48‰ and 8.8‰, respectively.

Discussion

The analysis of the notifications to the Catalan BV systems has provided useful information about existing risks associated with the quality and safety of tissues and organs, and enabled the implementation of actions targeted to diminish risks and mitigate damage.
Case Report: Uniportal robot-assisted thoracoscopic double-sleeve lobectomy after neoadjuvant immunotherapy
Authors: Fang Ziyao , Li Chang , Bosinceanu Mugurel L. , Ding Cheng , Zhao Jun , Gonzalez-Rivas Diego
Published: February 2024

Minimally invasive thoracic surgery, including video-assisted thoracoscopic surgery and robot-assisted thoracoscopic surgery, has been proven to have an advantage over open thoracotomy with less pain, fewer postoperative complications, faster discharge, and better tolerance among elderly patients. We introduce a uniportal robot-assisted thoracoscopic double-sleeve lobectomy performed on a patient following neoadjuvant immunotherapy. Specialized instruments like customized trocars with a reduced diameter, bulldog clamps, and double-needle sutures were utilized to facilitate the maneuverability through the single incision. This technique integrates the merits of multiport robot-assisted thoracic surgery with uniportal video-assisted thoracoscopic surgery.
Pet owner perspectives, motivators and concerns about veterinary biobanking
Authors: McEnhill Richard , Borghese Holly , Moore Sarah A.
Published: February 2024

Introduction

Veterinary biobanks store samples for future use and distribute samples to academic researchers and industry entities; however, informed consent provided by owners for pets contributing to biobanks can be complicated by limited understanding of goals, purpose, and logistics of biobanking.

Methods

This survey-based study aimed to gather feedback from pet owners on how they viewed allowing their pet to contribute to a veterinary biobank, with the goal of identifying opportunities to improve education, awareness of veterinary biobanking initiatives, and the consent processes. An electronic survey was distributed to a listserv of 2,119 pet owners and responses were received from 118 respondents (5.6%).

Results

Most respondents (67%) were not familiar with the concept of veterinary biobanking prior to having responded to the survey. Most (89%) were willing to allow their healthy pet to contribute samples to a veterinary biobanking program. Ninety-five percent would allow their sick pet to contribute. Most were neutral about financial incentives as a motivator to participate, although 40% indicated that if their pet’s condition resulted in a decision to humanely euthanize, they would be more likely to contribute to the biobank if the veterinary biobanking program covered the cost of euthanasia. Common concerns included security/confidentiality (36%), that results would not be shared with them (33%) or that samples would be used for other purposes beyond those advertised (22%).

Discussion

These results suggest veterinary biobanking initiatives are well received by owners and most are willing to allow their pets to participate. Respondent concerns represent opportunities for veterinary biobanks to improve messaging and dissemination of results from work they support.
Effect of miR-17 on Polygonum Cillinerve polysaccharide against transmissible gastroenteritis virus
Authors: Duan Xueqin , Xu Mengxin , Wang Yunying , Liu Nishang , Wang Xingchen , Liu Yingqiu , Zhang Weimin , Ma Wuren , Ma Lin , Fan Yunpeng
Published: February 2024

Transmissible gastroenteritis virus (TGEV) could cause diarrhea, vomiting, dehydration and even death in piglets, miRNA played an important role in the interaction between virus and cell. The study aimed to investigate the impact of miR-17 on the polysaccharide of Polygonum Cillinerve (PCP) in combating TGEV. miR-17 was screened and transfection validation was performed by Real-time PCR. The function of miR-17 on PK15 cells infected with TGEV and treated with PCP was investigated by DCFH-DA loading probe, JC-1 staining and Hoechst fluorescence staining. Furthermore, the effect of miR-17 on PCP inhibiting TGEV replication and apoptosis signaling pathways during PCP against TGEV infection was measured through Real-time PCR and Western blot. The results showed that miR-17 mimic and inhibitor could be transferred into PK15 cells and the expression of miR-17 significantly increased and decreased respectively compared with miR-17 mimic and inhibitor (P < 0.05). A total 250 μg/mL of PCP could inhibit cells apoptosis after transfection with miR-17. PCP (250 μg/mL and 125 μg/mL) significantly inhibited the decrease in mitochondrial membrane potential induced by TGEV after transfection with miR-17 (P < 0.05). After transfection of miR-17 mimic, PCP at concentrations of 250 μg/mL and 125 μg/mL significantly promoted the mRNA expression of P53, cyt C and caspase 9 (P < 0.05). Compared with the control group, the replication of TGEV gRNA and gene N was significantly inhibited by PCP at concentrations of 250 μg/mL and 125 μg/mL after transfection of both miR-17 mimic and inhibitor (P < 0.05). PCP at 62.5 μg/mL significantly inhibited the replication of gene S following transfection with miR-17 inhibitor (P < 0.05). These results suggested that PCP could inhibit the replication of TGEV and apoptosis induced by TGEV by regulating miR-17.
Seasonal changes in bird communities on poultry farms and house sparrow—wild bird contacts revealed by camera trapping
Authors: Sánchez-Cano Alberto , Camacho Maria-Cruz , Ramiro Yolanda , Cardona-Cabrera Teresa , Höfle Ursula
Published: February 2024

Introduction

Wild birds are considered reservoirs of poultry pathogens although transmission routes have not been conclusively established. Here we use camera trapping to study wild bird communities on commercial layer and red-legged partridge farms over a one-year timeframe. We also analyze direct and indirect interactions of other bird species with the house sparrow (Passer domesticus), a potential bridge host.

Methods

We conducted camera trapping events between January 2018 and October 2019, in two caged layer farms, one free-range layer farm, and two red-legged partridge farms in South-Central Spain.

Results and Discussion

We observed wild bird visits on all types of farms, with the significantly highest occurrence on red-legged partridge farms where food and water are more easily accessible, followed by commercial caged layer farms, and free-range chicken farms. The house sparrow (Passer domesticus) followed by spotless starlings (Sturnus unicolor) was the most encountered species on all farms, with the highest frequency in caged layer farms. On partridge farms, the house sparrow accounted for 58% of the wild bird detections, while on the free-range chicken farm, it made up 11% of the detections. Notably, the breeding season, when food and water are scarce in Mediterranean climates, saw the highest number of wild bird visits to the farms. Our findings confirm that the house sparrow, is in direct and indirect contact with layers and red-legged partridges and other wild birds independent of the type of farm. Contacts between house sparrows and other bird species were most frequent during the breeding season followed by the spring migration period. The species most frequently involved in interactions with the house sparrow belonged to the order Passeriformes. The study provides a comparative description of the composition and seasonal variations of bird communities in different types of layer/ poultry farms in Southern Spain i.e. a Mediterranean climate. It confirms the effectiveness of biosecurity measures that restrict access to feed and water. Additionally, it underscores the importance of synanthropic species, particularly the house sparrow, as potential bridge vector of avian pathogens.
Maturity Recognition and Fruit Counting for Sweet Peppers in Greenhouses Using Deep Learning Neural Networks
Authors: Viveros Escamilla Luis David , Gómez-Espinosa Alfonso , Escobedo Cabello Jesús Arturo , Cantoral-Ceballos Jose Antonio
Published: February 2024

This study presents an approach to address the challenges of recognizing the maturity stage and counting sweet peppers of varying colors (green, yellow, orange, and red) within greenhouse environments. The methodology leverages the YOLOv5 model for real-time object detection, classification, and localization, coupled with the DeepSORT algorithm for efficient tracking. The system was successfully implemented to monitor sweet pepper production, and some challenges related to this environment, namely occlusions and the presence of leaves and branches, were effectively overcome. We evaluated our algorithm using real-world data collected in a sweet pepper greenhouse. A dataset comprising 1863 images was meticulously compiled to enhance the study, incorporating diverse sweet pepper varieties and maturity levels. Additionally, the study emphasized the role of confidence levels in object recognition, achieving a confidence level of 0.973. Furthermore, the DeepSORT algorithm was successfully applied for counting sweet peppers, demonstrating an accuracy level of 85.7% in two simulated environments under challenging conditions, such as varied lighting and inaccuracies in maturity level assessment.
Genotypic Variation in Agronomic Traits and Molecular Markers among Chinese Luobuma (Apocynum spp.) Germplasm Accessions
Authors: Zhao Yufeng , Feng Runqiu , Li Tao , Zulfiqhar Jahufer Mohamed Zain , Wang Li , Zhang Jiyu
Published: February 2024

Apocynum spp., known as Chinese Luobuma species, are perennial herbaceous plants that not only have good ecological characteristics, such as drought resistance, salt resistance, freezing resistance, high-temperature resistance and wind sand resistance, but also have good medicinal and textile value. However, studies on the genetic variation in Chinese Luobuma are rare. In this study, the genotypic variation in the agronomic traits and molecular markers among eight germplasm accessions (referred to as genotypes) of Apocynum spp. was investigated. The accessions were evaluated at two locations in China, Altay and Yuzhong, during a three-year period. Analysis of the variance in yield-related traits revealed significant genotypic variation (p < 0.05) among the eight genotypes at the early flowering and full flowering stages. There were also significant (p < 0.05) genotype × year and genotype × location × year interactions for all the traits except leaf dry weight. In comparison to those evaluated at Yuzhong, the plant height, number of branches, leaf dry weight and stem dry weight at the early flowering stage were greater in Altay, with averages of 991.0 mm, 5.52, 26.41 g and 25.35 g, respectively. There were significant (p < 0.05) differences among genotypes in terms of the quality traits measured at the early and full flowering stages. The crude protein and crude fat content for each genotype at different locations at the early flowering stage in different years ranged from 8.64 to 10.07%. The average flavone (FLA) content was 2.31 mg/100 g. Principal component analysis (PCA) revealed that the G1 genotype in Altay had a higher neutral detergent fiber content and leaf dry weight, and the G2 genotype had a larger stem thickness, branch number and stem-to-leaf ratio. Five DNA sequences, ITS, matK, psbA-trnH, rbcL and trnL-F, were selected for analysis of the molecular variance in Chinese Luobuma. Analyses of molecular variance (AMOVA) based on the nuclear DNA sequences and chloroplast DNA sequences showed that most of the variation occurred within species. Our study indicated the significant genetic variation in Chinese Luobuma for future cultivar domestication. Genotypes with high leaf dry weights and many branches are beneficial for tea production, while tall plants with long internode lengths are valuable for the production of hemp.
The Effect of Hog Futures in Stabilizing Hog Production
Authors: Li Chunlei , Wang Gangyi , Shen Yuzhuo , Amètépé Nathanaël Beauclair Anani
Published: February 2024

China’s large-scale hog farmers are playing an increasingly important role in promoting the stable development of the hog industry. Taking large-scale hog enterprises as samples, based on hog sales data from January 2019 to July 2022, this paper adopts a two-way fixed-effects model to test the impact, mechanism, and heterogeneity of hog futures on the production stability of large-scale hog farmers. The study found that hog futures help promote stable production of large-scale farmers. This finding still holds after a series of robustness tests. The mechanism analysis found that, first, hog futures help large-scale farmers expand their risk management factor inputs. Second, hog futures help reduce the impact of hog price risk on production. Finally, hog futures help stabilize farmers’ production expectations. The moderating effects analysis found that the stabilizing effect of hog futures will enhance as farmers’ share of hog farming operations increases. Heterogeneity analysis found that when hog prices fluctuate negatively, hog futures help promote the stable production of large-scale farmers. When hog prices fluctuate positively, the production stabilization effect of hog futures is not obvious. Therefore, hog enterprises should be encouraged to participate in hog futures hedging transactions to promote stable hog production.
Evaluation of the Aluminum (Al3+) Tolerance of Camelina and the Potential for Using Melatonin or Nano-Selenium to Alleviate Al3+-Induced Stress in Camelina
Authors: Lv Zhao-Chen , Chen Min , Tang Yi , Gao Yang , Wu Hui-Zhen , Min Xueyang , Kim Do-Soon , Yan Xuebing , Yu Jialin , Zhang Chuan-Jie
Published: February 2024

This study was conducted to evaluate the Al3+ tolerance of sixteen camelina genotypes and to use melatonin or nano-selenium to alleviate Al3+-induced stress. A Petri dish study indicated seedling root length was suitable for describing the dose–response of seedling growth with increased Al3+ concentrations. Based on GR50 (Al3+ concentration causing a 50% reduction in the seedling root length), CamK6 (232.0 mg L−1) and CamK2 (97.0 mg L−1) were the most Al3+-tolerant and -sensitive genotypes, respectively. Under Al3+ stress, CamK6 and CamK2 treated by melatonin (50 μM) or nano-Se (0.4 mg L−1) showed a similar plant height and seed yield plant−1 (CamK6: 123.6 ± 9.8 cm and 0.562 ± 0.62 g; CamK2: 109.2 ± 8.7 cm and 0.49 ± 0.5 g) as the controls (CamK6: 121.1 ± 10.2 cm and 0.554 ± 0.4 g; CamK2: 110.0 ± 9.8 cm and 0.5 ± 0.4 g), and the values were greater than for the Al3+-treated plants (CamK6: 96.4 ± 9.2 cm and 0.48 ± 0.34 g; CamK2: 97.3 ± 8.1 cm and 0.42 ± 0.31 g). The results showed that melatonin or nano-Se through modulating biochemical reactions (e.g., antioxidant enzyme) can alleviate Al3+-induced growth inhibition in camelina. This study suggested melatonin or nano-Se can alleviate Al3+-induced growth inhibition by maintaining seed yield and improving oil quality in camelina.
Optimization of the Enzymatic Extraction of Naringenin from Pink Grapefruit Pulp (Citrus × paradisi Macfad.)
Authors: Polo-Castellano Curro , Mateos Rosa María , Visiedo Francisco , Palma Miguel , Fernández Barbero Gerardo , Ferreiro-González Marta
Published: February 2024

Naringenin is one of the main phenolic compounds found in grapefruit (Citrus × paradisi Macfad.). This compound is known for its therapeutical properties as an antioxidant, antidiabetic, antihyperlipidemic and antineoplastic agent. In order to enable the development of drugs based on this compound, an appropriate extraction method needs to be developed. For this study, enzymatic extraction was chosen, as it is a cheap and green extraction method. Optimal extraction conditions (pH, temperature, agitation, solvent composition, sample-to-solvent ratio and enzyme-to-sample ratio) were determined through a Plackett–Burman and a Box–Behnken design, resulting in pH 6.0, 40 °C, 50 rpm, 20% EtOH, 0.2 g sample per 15 mL solvent and 1000 U/g. Once extraction conditions were determined, a single-factor experiment was performed under optimal conditions to determine extraction time, which resulted in 10 min per extraction. Finally, repeatability and intermediate precision were evaluated through naringenin quantification. Good values were obtained for both parameters (1.80% and 2.05%, respectively). Furthermore, extracts presented significant amount of naringenin (0.18 ± 0.02 mg/g).
Potential Momilactones in Rice Stress Tolerance and Health Advantages
Authors: Rayee Ramin , Anh La Hoang , Khanh Tran Dang , Xuan Tran Dang
Published: February 2024

The aim of this review was to provide an updated outlook on the relevance of momilactones in rice during the 50 years since their discovery. Momilactones A (MA) and B (MB) were initially extracted from rice husks in 1973 and have since been identified in various parts of the rice plant including leaves, bran, straw, roots, and root exudates. The biosynthesis of these compounds in rice initiates from geranylgeranyl diphosphate (GGDP) and progresses through several cyclization stages. The genes governing the synthesis of MA and MB are located on chromosome 4 within the rice genome. Concentrations of these compounds vary across different parts of the rice plant, ranging from 2 to 157 μg/g. Notably, Japonica rice varieties tend to have higher levels of MA and MB (157 and 83 μg/g, respectively) compared to Indica varieties (20.7 and 4.9 μg/g, respectively). There is a direct correlation between the levels of MA and MB and the increase in antioxidant activity, protein, and amylose content in rice grains. The production of these compounds is enhanced under environmental stresses such as drought, salinity, chilling, and UV exposure, indicating their potential role in rice’s tolerance to these conditions. MA and MB also demonstrate allelopathic, antibacterial, and antifungal properties, potentially improving the resilience of rice plants against biotic stressors. Although their antioxidant activity is modest, they effectively inhibit leukemia cells at a concentration of 5 µM. They also show promise in diabetes management by inhibiting enzymes like α-amylase (with IC50 values of 132.56 and 129.02 mg/mL, respectively) and α-glucosidase (with IC50 values of 991.95 and 612.03 mg/mL, respectively). The therapeutic qualities of MA and MB suggest that cultivating rice varieties with higher concentrations of these compounds, along with developing their derivatives, could benefit the pharmaceutical industry and enhance treatments for chronic diseases. Consequently, breeding rice cultivars with increased momilactone levels could offer substantial advantages to rice farmers.
Changes in the Root Architecture of Oil Palm Seedlings in Response to Nitrogen Starvation
Authors: De la Peña Marlon , Ruiz-Romero Rodrigo , Castro-Arza Laura Isabel , Romero Hernán Mauricio
Published: February 2024

Oil palm (Elaeis guineensis) is a widely cultivated crop known for its high oil yield. It is cultivated extensively across tropical regions, notably in Southeast Asia, Africa, and Latin America. It plays a vital role in global vegetable oil supply, meeting approximately 35% of the world’s demand. However, the expansion of oil palm plantations often involves the utilization of degraded soils where nutrient availability, particularly nitrogen, is limited, posing challenges to plant growth and productivity. Roots are crucial in responding to nitrogen deficiency by adjusting their growth and distribution; however, research on root system distribution patterns in oil palm still needs to be completed. This study analyzes the root system architecture using RhizoVision Explorer, a 2D root image processing software while assessing its relationship with nitrogen availability across two commercial cultivars: Deli × La Mé of African oil palm (Elaeis guineensis) and the interspecific hybrid O×G Coari × La Mé. Our findings reveal significant associations between eight root traits in oil palm seedlings and treatments with and without nitrogen availability. Notably, total root morphology (length, surface area, and volume), rotation angle, solidity, and hole characteristics decreased under nitrogen deprivation, whereas surface angle frequency increased. We highlight the variability of these traits across cultivars, suggesting genetic dependence and potential utility in breeding programs. Moreover, interactions observed in primary root morphology and hole size indicate greater differences between control and nitrogen-treated groups in C × LM than in D × LM cultivars. On the other hand, cultivar differences, regardless of nitrogen availability, influenced lateral root morphology, while nitrogen availability, irrespective of cultivar, affected inclined angle frequency. Significant differences were observed in growth and development parameters such as root and shoot biomass, root-to-shoot ratio, and leaf emission numbers between nitrogen-optimal and nitrogen-starved conditions. Nitrogen significantly affects root architecture and plant growth in oil palm, particularly in the C × LM cultivar during the nursery stage.
Screening Local Sicilian Tomato Ecotypes to Evaluate the Response of Tomato Brown Rugose Fruit Virus Infection
Authors: Caruso Andrea Giovanni , Panno Stefano , Ragona Arianna , Peiró Rosa , Vetrano Filippo , Moncada Alessandra , Miceli Alessandro , La Marra Consuelo Maria , Galipienso Luis , Rubio Luis , Davino Salvatore
Published: February 2024

Tomato is one of the most important crops worldwide, with a production of ≈190 million tons, but it is constantly threatened by several viral diseases. Tomato brown rugose fruit virus (ToBRFV), identified in 2014 on tomato plants and subsequently reported in many countries, represents one of the major threats to tomato crops, due to production losses, different transmission modes and its rapid spread. This work aimed to evaluate 37 local Sicilian tomato ecotypes against ToBRFV infection. After a preliminary screening by molecular analyses for tomato mosaic virus (ToMV) and pepino mosaic virus (PepMV), and ToBRFV detection, tomato plants were grown in a greenhouse for their morphological characterization and for evaluating resistance and tolerance to ToBRFV. Resistance and tolerance levels were estimated by mechanical inoculation with ToB SIC01/19 ToBRFV isolate in ten plants per ecotype and evaluating virus accumulation by RT-qPCR and visual observation of symptoms. All ecotypes were infected with ToBRFV, showing several symptoms with different disease severity. No tomato ecotype showed a high level of resistance, but two ecotypes, Pop27 and Pop35, showed very moderate symptoms and therefore a high tolerance. These Sicilian tomato ecotypes could be used in genetic breeding programs as parental ones to obtain cultivars tolerant to ToBRFV.
Late History of Cattle Breeds in Central Europe in Light of Genetic and Archaeogenetic Sources—Overview, Thoughts, and Perspectives
Authors: Janák Vojtěch , Novák Karel , Kyselý René
Published: February 2024

Although Europe was not a primary centre of cattle domestication, its expansion from the Middle East and subsequent development created a complex pattern of cattle breed diversity. Many isolated populations of local historical breeds still carry the message about the physical and genetic traits of ancient populations. Since the way of life of human communities starting from the eleventh millennium BP was strongly determined by livestock husbandry, the knowledge of cattle diversity through the ages is helpful in the interpretation of many archaeological findings. Historical cattle diversity is currently at the intersection of two leading directions of genetic research. Firstly, it is archaeogenetics attempting to recover and interpret the preserved genetic information directly from archaeological finds. The advanced archaeogenetic approaches meet with the population genomics of extant cattle populations. The immense amount of genetic information collected from living cattle, due to its key economic role, allows for reconstructing the genetic profiles of the ancient populations backwards. The present paper aims to place selected archaeogenetic, genetic, and genomic findings in the picture of cattle history in Central Europe, as suggested by archaeozoological and historical records. Perspectives of the methodical connection between the genetic approaches and the approaches of traditional archaeozoology, such as osteomorphology and osteometry, are discussed. The importance, actuality, and effectiveness of combining different approaches to each archaeological find, such as morphological characterization, interpretation of the historical context, and molecular data, are stressed.
Effects of Probiotic-Fermented Feed on the Growth Profile, Immune Functions, and Intestinal Microbiota of Bamei Piglets
Authors: Zhang Miao , Yang Zhenyu , Wu Guofang , Xu Fafang , Zhang Jianbo , Luo Xuan , Ma Yuhong , Pang Huili , Duan Yaoke , Chen Jun , Cai Yimin , Wang Lei , Tan Zhongfang
Published: February 2024

Purebred Bamei piglets present problems, including slow growth, respiratory disease, and post-weaning stress. This study investigated the effects of Lactobacillus plantarum QP28-1- and Bacillus subtilis QB8-fermented feed supplementation on the growth performance, immunity, and intestinal microflora of Bamei piglets from Qinghai, China. A total of 48 purebred Bamei piglets (25 days; 6.8 ± 0.97 kg) were divided into the following four groups for a 28-day diet experiment: basal feed (CK); diet containing 10% Lactobacillus plantarum-fermented feed (L); diet containing 10% Bacillus subtilis-fermented feed (B); and diet containing a mixture of 5% Lactobacillus plantarum + 5% Bacillus subtilis-fermented feed (H). The daily weight gain and daily food intake of group H increased (p < 0.05), and the feed/weight gain ratios of the groups fed with fermented feed decreased more than that of the CK group. The levels of three immune factors, namely immunoglobulin (Ig)M, IgG, and interferon-γ, were higher (p < 0.05), whereas those of tumor necrosis factor-α, interleukin (IL)-1β, and IL-6 were lower (p < 0.05) in the fermented feed groups than in the CK group. Total protein was higher (p < 0.05), while urea nitrogen, total cholesterol and triglycerides were lower (p < 0.05) in the mixed-fermented feed group than in the CK group. Analysis of the gut microbiota showed that the addition of fermented feed increased the α-diversity of the gut microbiota, increasing the abundances of probiotics including Lactobacillus, Muribaculaceae, Ruminococcaceae, Prevotellaceae, and Rikenellaceae. Additionally, correlation analysis demonstrated that several of these probiotic bacteria were closely related to serum immunity. In conclusion, fermented feed supplementation rebuilt the intestinal microbiota of Bamei piglets, thereby reducing the feed/weight ratio, improving feed intake, and enhancing immunity.
The Genetic Basis of Melanism in Abert’s Squirrel (Sciurus aberti)
Authors: Barrett Lake H. , Fraga Dean , Lehtinen Richard M.
Published: February 2024

Melanism is widespread in different taxa and has been hypothesized to provide adaptive benefits in certain environments. Melanism is typically caused by mutations in one of two regulatory genes: the Melanocortin 1 Receptor (MC1R) or the Agouti Signaling Protein (ASIP). Melanism has repeatedly evolved among tree squirrels and their relatives (tribe Sciurini) in at least 12 different species based on our review of the literature. The causal mutations for melanism have been characterized in two species so far. This study examines Abert’s Squirrel (Sciurus aberti), which has a melanistic morph whose genetic basis has not yet been established. We sequenced the MC1R and ASIP genes for five wild-type and seven melanistic S. aberti individuals to search for melanism-associated mutations. A novel single base pair mutation in the ASIP gene, unique to S. aberti, was found to be associated with melanism in the species, indicating that melanism in S. aberti evolved independently from other tree squirrels and thus represents an example of convergent evolution. The independent evolution of melanism in this species suggests that there is an adaptive advantage to the melanistic phenotype. The geographic range and habitat of S. aberti suggest possible benefits associated with thermoregulation, post-forest-fire camouflage, or other untested hypotheses.
Modulation of Performance, Plasma Constituents, Small Intestinal Morphology, and Cecum Microbiota in Growing Geese by Dietary Citric Acid Supplementation
Authors: Zhang Yongkang , Xue Jiajia , Chen Ying , Huang Xiaofeng , Liu Zuolan , Zhong Hang , Xie Qun , Luo Yi , Wang Qigui , Wang Chao
Published: February 2024

To investigate the efficiency and optimum inclusion level of CA in growing geese diets on performance, plasma constituents, and intestinal health, 240 healthy female geese at the age of 28d were randomly allotted six treatment diets incorporated with 0, 0.8, 1.6, 2.4, 3.2, and 4% CA. Each treatment group consisted of five replicates and eight birds per replicate. The findings demonstrated that 3.2% CA supplementation resulted in improved growth performance (ADG, ADFI, and FBW) (p = 0.001), and geese who received CA also showed lower body fat contents (p < 0.05) than the control group. Moreover, geese from the 2.4% and 3.2% CA group had the highest plasma glutathione peroxidase and insulin-like growth factor 1 levels compared to the other groups (p < 0.05). A microbial diversity analysis of the cecum conducted by 16S rDNA sequencing revealed that 3.2% CA supplementation showed a significantly higher abundance of beneficial bacteria (Muribaculaceae, CHKCI001, Erysipelotricha-ceae_UCG_003, and UCG_009) (p < 0.05) and a lower abundance of harmful bacteria (Atopobiaceae, Streptococcus, Acinetobacter, Pseudomonas, and Alistipes) (p < 0.10). Collectively, our results revealed that dietary supplementation with 3.2% CA had several benefits on the performance and physiological health of growing geese by promoting nutrients metabolism, improving antioxidant capacity, and modulating cecum microbiota.
Comparative Analysis of Intestinal Inflammation and Microbiota Dysbiosis of LPS-Challenged Piglets between Different Breeds
Authors: Li Chao , Wang Yanping , Zhao Xueyan , Li Jingxuan , Wang Huaizhong , Ren Yifan , Sun Houwei , Zhu Xiaodong , Song Qinye , Wang Jiying
Published: February 2024

Post-weaning diarrhea is common in piglets, causing huge economic losses worldwide. Associations between LPS challenge, intestinal inflammation, and microbiota have been reported in Duroc × Landrace × Yorkshire (DLY) crossbred pigs. However, the effects of LPS challenge in other breeds remain unclear. In the current study, we performed a comprehensive comparative analysis of the effects of LPS challenge on jejunal mucosal morphology, jejunal microbial composition, and serum indexes in two pig breeds: DLY and Heigai, an indigenous Chinese breed. The results showed that LPS caused considerable damage to the mucosal morphology, enhanced serum levels of inflammatory cytokines and the intestinal permeability index, and lowered the antioxidant capacity index. LPS challenge also changed the microbial composition and structure of the jejunum, significantly increased the abundances of Escherichia-Shigella in DLY pigs, and decreased those of Gemella and Saccharimonadales in Heigai pigs. Furthermore, LPS challenge triggered functional changes in energy metabolism and activities related to the stress response in the jejunal bacterial community, alleviating the inflammatory response in Heigai pigs. This study also revealed that Heigai pigs had a weaker immune response to LPS challenge than DLY pigs, and identified several genera related to the breed-specific phenotypes of Heigai pigs, including Gemella, Saccharimonadales, Clostridia_UCG_014, Terrisporobacter, and Dielma. Our collective findings uncovered differences between Heigai and DLY pigs in intestinal inflammation and microbiota dysbiosis induced by LPS challenge, providing a theoretical basis for unraveling the mechanism of intestinal inflammation in swine and proposing microbial candidates involved in the resistance to diarrhea in piglets.
Identifying Relationships between Glutathione S-Transferase-2 Single Nucleotide Polymorphisms and Hypoxia Tolerance and Growth Traits in Macrobrachium nipponense
Authors: Gao Xuanbin , Gao Zijian , Zhang Minglei , Qiao Hui , Jiang Sufei , Zhang Wenyi , Xiong Yiwei , Jin Shubo , Fu Hongtuo
Published: February 2024

Investigating hypoxia tolerance and growth trait single nucleotide polymorphisms (SNPs) in Macrobrachium nipponense is conducive to cultivating prawns with hypoxia tolerance and good growth characteristics. The glutathione S-transferase-2 gene (GST-2) has been shown to regulate hypoxia responses in M. nipponense. In this study, we identified a single GST-2 SNP in M. nipponense, and analyzed its regulatory relationship with hypoxia tolerance and growth. The GST-2 sequence was amplified with a polymerase chain reaction from 197 “Taihu Lake No. 3”, “Taihu Lake No. 2”, and Pearl River population samples to identify SNP loci. The full-length Mn-GST2 sequence was 2317 bp, including three exons and two introns. In total, 38 candidate SNP loci were identified from GST-2 using Mega11.0 comparisons, with most loci moderately polymorphic in terms of genetic diversity. Locus genotypes were also analyzed, and basic genetic parameters for loci were calculated using Popgene32 and PIC_CALC. The expected heterozygosity of the 38 SNP loci ranged from 0.2334 to 0.4997, with an average of 0.4107, while observed heterozygosity ranged from 0.1929 to 0.4721, with an average of 0.3401. The polymorphic information content ranged from 0.21 to 0.37. From SPSS analyses, the G+256A locus was significantly correlated with hypoxia tolerance across all three M. nipponense populations, while the SNP loci A+261C, C+898T, A+1370C, and G+1373T were significantly associated with growth traits. Further analyses revealed that the T+2017C locus was significantly correlated with hypoxia tolerance in “Taihu Lake No. 2” populations, G+256A, A+808T, C+1032T, and A+1530G loci were significantly correlated with hypoxia tolerance in “Taihu Lake No. 3” populations, while no SNP loci were correlated with hypoxia tolerance in Pearl River populations. A+1370C and G+1373T loci, which were associated with growth traits, exhibited a high degree of linkage disequilibrium (r2 = 0.89 and r2 > 0.8), suggesting potential genetic linkage. Our data suggest associations between hypoxia tolerance and growth trait SNP loci in M. nipponense, and provide valuable evidence for the genetic improvement of growth and hypoxia tolerance in this prawn species.
A Polyherbal Mixture with Nutraceutical Properties for Ruminants: A Meta-Analysis and Review of BioCholine Powder
Authors: Mendoza-Martínez Germán David , Orzuna-Orzuna José Felipe , Roque-Jiménez José Alejandro , Gloria-Trujillo Adrián , Martínez-García José Antonio , Sánchez-López Nallely , Hernández-García Pedro Abel , Lee-Rangel Héctor Aaron
Published: February 2024

BioCholine Powder is a polyherbal feed additive composed of Achyrantes aspera, Trachyspermum ammi, Azadirachta indica, and Citrullus colocynthis. The objective of this study was to analyze published results that support the hypothesis that the polyherbal product BioCholine Powder has rumen bypass choline metabolites through a meta-analysis and effect size analysis (ES). Using Scopus, Web of Science, ScienceDirect, PubMed, and university dissertation databases, a systematic search was conducted for experiments published in scientific documents that evaluated the effects of BioCholine supplementation on the variables of interest. The analyzed data were extracted from twenty-one publications (fifteen scientific articles, three abstracts, and three graduate dissertations available in institutional libraries). The studies included lamb growing–finishing, lactating ewes and goats, calves, and dairy cows. The effects of BioCholine were analyzed using random effects statistical models to compare the weighted mean difference (WMD) between BioCholine-supplemented ruminants and controls (no BioCholine). Heterogeneity was explored, and three subgroup analyses were performed for doses [(4 (or 5 g/d), 8 (10 g/d)], supplementation in gestating and lactating ewes (pre- and postpartum supplementation), and blood metabolites by species and physiological state (lactating goats, calves, lambs, ewes). Supplementation with BioCholine in sheep increased the average daily lamb gain (p < 0.05), final body weight (p < 0.01), and daily milk yield (p < 0.05) without effects on intake or feed conversion. Milk yield was improved in small ruminants with BioCholine prepartum supplementation (p < 0.10). BioCholine supplementation decreased blood urea (p < 0.01) and increased levels of the liver enzymes alanine transaminase (ALT; p < 0.10) and albumin (p < 0.001). BioCholine doses over 8 g/d increased blood glucose, albumin (p < 0.10), cholesterol, total protein, and globulin (p < 0.05). The ES values of BioCholine in retained energy over the control in growing lambs were +7.15% NEm (p < 0.10) and +9.25% NEg (p < 0.10). In conclusion, adding BioCholine Powder to domestic ruminants’ diets improves productive performance, blood metabolite indicators of protein metabolism, and liver health, showing its nutraceutical properties where phosphatidylcholine prevails as an alternative that can meet the choline requirements in ruminants.
The Fragmented Picture of Antimicrobial Resistance in Kenya: A Situational Analysis of Antimicrobial Consumption and the Imperative for Antimicrobial Stewardship
Authors: Sohaili Aarman , Asin Judith , Thomas Pierre P. M.
Published: February 2024

Antimicrobial resistance (AMR) jeopardizes the effectiveness of essential antimicrobial agents in treating infectious diseases. Accelerated by human activities, AMR is prevalent in Sub-Saharan Africa, including Kenya, due to indiscriminate antibiotic use and limited diagnostics. This study aimed to assess Kenya’s AMR efforts through a situational analysis of policy efficacy, interventions, and implementation, culminating in recommendations for strengthening mitigation. Employing two methodologies, this study evaluated Kenya’s AMR endeavors. A systematic scoping review summarized AMR dynamic, and an expert validated the findings, providing an on-the-ground perspective. Antibiotic resistance is driven by factors including widespread misuse in human medicine due to irrational practices, consumer demand, and substandard antibiotics. Heavy antibiotic use in the agricultural sector leads to contamination of the food chain. The National Action Plan (NAP) reflects a One Health approach, yet decentralized healthcare and funding gaps hinder its execution. Although AMR surveillance includes multiple facets, diagnostic deficiencies persist. Expert insights recognize proactive NAP but underscore implementation obstacles. Kenya grapples with escalating resistance, but commendable policy efforts exist. However, fragmented implementations and complexities persist. Addressing this global threat demands investment in healthcare infrastructure, diagnostics, international partnerships, and sustainable strategies.
Fungal Endophthalmitis: Clinical Characteristics, Pathogens, and Factors Affecting Visual Outcome
Authors: Li Xiaoxia , Chen Zhi , Zhang Xiuwen , Zhou Zimei , Boost Maureen , Huang Taomin , Zhou Xingtao
Published: February 2024

Aims: The aims of this study are to investigate the etiology, microbiological spectrum, and risk factors associated with visual outcomes of fungal endophthalmitis (FE) in a tertiary eye specialty hospital in Shanghai, China. Methods: This was a retrospective, single-center case series. The clinical characteristics, etiology, microbiological spectrum, and management, as well as the visual outcomes, were analyzed. Logistic regression was used to analyze the factors related to visual outcomes. Results: This study involved 102 eyes of 92 patients with FE, including 63 males (66.3%). The mean age was 44.4 ± 19.8 years. The most common etiology of FE was trauma (56.5%). The predominant fungal species isolated were Aspergillus spp. (31/93, 33.3%). Pars plana vitrectomy (PPV) and intravitreal antifungal agents was performed initially in 86 (84.3%) and 83 (81.4%) eyes, respectively. Only 35 (34.3%) eyes achieved final best corrected visual acuity (BCVA) of 20/400 or better. Ten (9.8%) eyes had a final BCVA of light perception or worse, and five (4.9%) had to be enucleated. The factors determining better visual outcomes included initial visual acuity better than finger-counting (FC) (odds ratio (OR) 5.811, p = 0.036), the absence of corneal infiltrate (OR 10.131, p = 0.002), and Candida species infection (OR 6.325, p = 0.011). Conclusions: Early diagnosis of FE and a timely vitrectomy, combined with an intravitreal injection of an antifungal drug, can mitigate the devastating results of intraocular fungal infection. Not being infected by Aspergillus spp., an initial BCVA that was no worse than FC, and the absence of corneal involvement were related to better visual prognosis.
The Skeletal Muscle, the Heart, and the Liver Are the Major Organs of the Accumulation of Nitric Oxide Metabolites after Oral Nitrite Treatment
Authors: Lima-Silva Ana K. , Rebelo Macario A. , Barros Alessandra C. , Conde-Tella Sandra O. , Tanus-Santos Jose E.
Published: February 2024

Nitrite is a nitric oxide (NO) metabolite, which may be bioactivated to generate NO in vivo and supplement endogenous NO formation, especially in cardiovascular and metabolic diseases. However, it is not known whether treatment with oral nitrite results in the accumulation of NO metabolites in different organs. Moreover, treatment with omeprazole, an inhibitor of gastric acid secretion, severely affects the gastric formation of S-nitrosothiols induced with oral nitrite treatment. However, no previous study has examined whether omeprazole affects the nitrite-induced accumulation of NO metabolites in different organs. This study examined in rats the effects of oral sodium nitrite treatment (15 mg/kg via gavage for 1 or 7 days) associated with omeprazole (10 mg/kg or vehicle) on nitrite and nitrate and nitrosylated species (RXNO) concentrations (measured using ozone-based chemiluminescence methods) assessed in the plasma, aorta, heart, liver, brain, and muscle. While our results showed that NO metabolite accumulation in different organs is not uniform, we found that the skeletal muscle, the heart, and the liver accumulate NO metabolites, particularly RXNO. This response was significantly attenuated by omeprazole in the heart and in the skeletal muscle. Together, these findings may indicate that the skeletal muscle, the heart, and the liver are major reservoir sites for NO metabolites after oral nitrite treatment, with major increases in nitrosylated species.
Transcriptotype-Driven Discovery of Apigenin as a Therapy against Cholestatic Liver Fibrosis: Through Inhibition of PANoptosis and Following Type-I Interferon Responses
Authors: Duan Shuni , Li Xin , Han Junsong , Yang Yang , Luo Ranyi , Cai Yajie , Li Xiaojiaoyang , Zheng Qi , Guo Jincheng , Liu Runping
Published: February 2024

Cholangiopathies lack effective medicines and can progress into end-stage liver diseases. Mining natural product transcriptome databases for bioactive ingredients, which can reverse disease-associated transcriptomic phenotypes, holds promise as an effective approach for drug discovery. To identify disease-associated transcriptomic changes, we performed RNA-sequencing on bile duct ligation (BDL)-induced cholestatic liver fibrosis mice, as well as PBC and PSC patients, and found that PANoptosis and activation of type-I interferon (IFN) signaling were observed in BDL mice and patients with PBC and PSC. We then established a transcriptotype-driven screening system based on HERB and ITCM databases. Among 283 natural ingredients screened, apigenin (Api), which is widely distributed in varieties of food and medicinal plants, was screened out by our screen system since it reversed the expression pattern of key genes associated with PANoptosis and type-I IFN responses. In BDL, Abcb4−/−, and DDC-fed mice, Api effectively ameliorated liver injuries, inflammation, and fibrosis. It also protected cholangiocytes from bile acid-stimulated PANoptosis, thus alleviating damage-associated molecular pattern-mediated activation of TBK1-NF-κB in macrophages. Additionally, Api directly inhibited type-I IFN-induced downstream inflammatory responses. Our study demonstrated the pathogenic roles of PANoptosis and type-I IFN signaling in cholestatic liver fibrosis and verified the feasibility of transcriptotype-based drug screening. Furthermore, this study revealed a novel anti-inflammatory mechanism of Api and identified it as a promising candidate for the treatment of cholestatic liver fibrosis.