bluuebunny/crossref_metadata_2025 huggingface dataset:
Regional resting state perfusion variability and delayed cerebrovascular uniform reactivity in subjects with chronic carotid artery stenosis
Authors: Szarmach Arkadiusz , Kaszubowski Mariusz , Sabisz Agnieszka , Frydrychowski Andrzej F , Halena Grzegorz , Piskunowicz Maciej , Dzierzanowski Jaroslaw , Studniarek Michal , Szurowska Edyta , Winklewski Pawel J
Published: November 2018

The aim of this study was to assess regional perfusion at baseline and regional cerebrovascular resistance (CVR) to delayed acetazolamide challenge in subjects with chronic carotid artery stenosis.Sixteen patients (ten males) aged 70.94±7.71 with carotid artery stenosis ≥90% on the ipsilateral side and ≤50% on the contralateral side were enrolled into the study. In all patients, two computed tomography perfusion examinations were carried out; the first was performed before acetazolamide administration and the second 60 minutes after injection.The differences between mean values were examined by paired two-sample t-test and alternative nonparametric Wilcoxon’s test. Normality assumption was examined using W Shapiro-Wilk test.The lowest resting-state cerebral blood flow (CBF) was observed in white matter (ipsilateral side: 18.4±6.2; contralateral side: 19.3±6.6) and brainstem (ipsilateral side: 27.8±8.5;  contralateral side: 29.1±10.8). Grey matter (cerebral cortex) resting state CBF was below the normal value for subjects of this age: frontal lobe – ipsilateral side: 30.4±7.0, contralateral side: 33.7±7.1; parietal lobe – ipsilateral side: 36.4±11.3, contralateral side: 42.7±9.9; temporal lobe – ipsilateral side: 32.5±8.6, contralateral side: 39.4±10.8; occipital lobe – ipsilateral side: 24.0±6.0, contralateral side: 26.4±6.6). The highest resting state CBF was observed in the insula (ipsilateral side: 49.2±17.4; contralateral side: 55.3±18.4). A relatively high resting state CBF was also recorded in the thalamus (ipsilateral side: 39.7±16.9; contralateral side: 41.7±14.1) and cerebellum (ipsilateral side: 41.4±12.2; contralateral side: 38.1±11.3). The highest CVR was observed in temporal lobe cortex (ipsilateral side: +27.1%; contralateral side: +26.1%) and cerebellum (ipsilateral side: +27.0%; contralateral side: +34.6%). The lowest CVR was recorded in brain stem (ipsilateral side: +20.2%; contralateral side: +22.2%) and white matter (ipsilateral side: +18.1%; contralateral side: +18.3%). All CBF values were provided in milliliters of blood per minute per 100 g of brain tissue [ml/100g/min]. Resting state circulation in subjects with carotid artery stenosis is low in all analysed structures with the exception of insula and cerebellum. Acetazolamide challenge yields relatively uniform response in both hemispheres in the investigated population.Grey matter is more reactive to acetazolamide challenge than white matter or brainstem.
Mechanical, Heat-resistant, Crystallographic and Dynamical Mechanical Properties of Nylon 6/ P(N-phenylmaleimide-alt-styrene) Blends
Authors: Liu Yufei , He Min , Zhang Daohai , Zhao Qian , Qin Shu-Hao , Yu Jie
Published: November 2018

In this work, nylon 6/ P(N-phenylmaleimide-alt-styrene) blends were prepared by melt blending, and the mechanical, heat-resistant, crystallographic and dynamical mechanical properties of nylon 6/ P(N-phenylmaleimide-alt-styrene) blends with different contents were investigated and analyzed. The results showed that the mechanical properties decreased with increasing PNS, while the heat deflection temperature (HDT), relative crystallinity (Xn), and storage modulus (G’) increased with increasing PNS. The results of differential Scanning Calorimetry (DSC) proved the PNS played the positive role of nucleating PA6. And the results of dynamic mechanical analysis (DMA) proved the PNS could improve the rigidity of PA6/PNS blends. From the SEM, these PNS domains were between 0.2 and 4 μm in diameter. The experimental results indicated that the addition of PNS improved the rigidity of PA6/PNS blends, and then improved the heat-resistant property.
Modelling a Silent Epidemic: A Review of the In Vitro Models of Latent Tuberculosis
Authors: Gibson Savannah E R , Harrison James , Cox Jonathan A G
Published: November 2018

Tuberculosis (TB) is the primary cause of death by a single infectious agent; responsible for around two million deaths in 2016. A major virulence factor of TB is the ability to enter a latent or Non-Replicating Persistent (NRP) state which is presumed untreatable. Approximately, 1.7 billion people are latently infected with TB and on reactivation many of these infections are drug resistant. As the current treatment is ineffective and diagnosis remains poor, millions of people have the potential to reactivate into active TB disease. The immune system seeks to control the TB infection by containing the bacteria in a granuloma, where it is exposed to stressful anaerobic and nutrient deprived conditions. It is thought to be these environmental conditions that trigger the NRP state. A number of in vitro models have been developed that mimic conditions within the granuloma to a lesser or greater extent. These different models have all been utilised for the research of different characteristics of NRP Mycobacterium tuberculosis, however their disparity in approach and physiological relevance often results in inconsistencies and a lack of consensus between studies. This review provides a summation of the different NRP models and a critical analysis of their respective advantages and disadvantages relating to their physiological relevance.
Real-Time Inferential Analytics Based on Online Databases of Trends: A Breakthrough within the Discipline of Digital Epidemiology in Dentistry and Dental Anatomy
Authors: Al-Imam Ahmed , Khalid Usama , Al-Hadithi Nawfal , Kaouche Dawoude
Published: November 2018

BACKGROUND Epidemiological sciences have been evolving at an exponential rate paralleled only by the comparable growth within the discipline of data science. Digital epidemiological studies are playing a vital role in medical science analytics for the past few decades. To date, there are no published attempts at deploying the use of real-time analytics in connection with the disciplines of Dentistry or Medicine. AIMS AND OBJECTIVES We deployed a real-time statistical analysis in connection with topics in Dental Anatomy and Dental Pathology represented by the maxillary sinus, posterior maxillary teeth, related oral pathology. The purpose is to infer the digital epidemiology based on a continuous stream of raw data retrieved from Google Trends database. MATERIALS AND METHODS Statistical analysis was carried out via Microsoft Excel 2016 and SPSS version 24. Google Trends database was used to retrieve data for digital epidemiology. Real-time analytics and the statistical inference were based on encoding a programming script using Python high-level programming language. A systematic review of the literature was carried out via PubMed-NCBI, the Cochrane Library, and Elsevier databases. RESULTS The comprehensive review of databases of the literature, based on specific keywords search, yielded 491813 published studies. These were distributed as 488884 (PubMed-NCBI), 1611 (the Cochrane Library), and 1318 (Elsevier). However, there was no single study attempting real-time analytics. Nevertheless, we succeeded in achieving an automated real-time stream of data accompanied by a statistical inference based on data extrapolated from Google Trends. CONCLUSION Real-time analytics are of considerable impact when implemented in biological and life sciences as they will tremendously reduce the required resources for research. Predictive analytics, based on artificial neural networks and machine learning algorithms, can be the next step to be deployed in continuation of the real-time systems to prognosticate changes in the temporal trends and the digital epidemiology of phenomena of interest.
Medium-Term Hydropower Scheduling with Variable Head under Inflow, Energy and Reserve Capacity Price Uncertainty
Authors: Hjelmeland Martin N. , Helseth Arild , Korpås Magnus
Published: November 2018

We propose a model for medium-term hydropower scheduling (MTHS) with variable head and uncertainty in inflow, reserve capacity, and energy price. With an increase of intermittent energy sources in the generation mix, it is expected that a flexible hydropower producer can obtain added profits by participating in other markets than just the energy market. To capture this added potential the hydropower system should be modeled with a higher level of details. In this context, we apply an algorithm based on stochastic dual dynamic programming (SDDP) to solve the nonconvex MTHS problem, and show that the use of Strengthened Benders (SB) cuts to represent the expected future profit (EFP) function provide accurate scheduling results for slightly nonconvex problems. A method to visualize the EFP function in a dynamic programming setting is provided, serving as a useful tool for a priori inspection of the EFP shape and its nonconvexity.
Risk Assessment of BTEX Concentration from Combustion of Coal in a Controlled Laboratory Environment
Authors: Masekameni Daniel , Moolla Raeesa , Gulumian Mary , Brouwer Derk
Published: November 2018

A D-grade type coal was burned under simulated domestic practices in a controlled laboratory set-up, in order to characterize emissions of volatile organic compounds (VOCs); viz. benzene, toluene, ethylbenzene and xylenes (BTEX). Near-field concentrations were collected in a shack-like structure constructed using corrugated iron, simulating a traditional house found in informal settlements in South Africa. Measurements were carried out using the Synspec Spectras GC955 real-time monitor over a three-hour burn cycle. The 3-hour average concentrations (in µg/m3) of benzene, toluene, ethylbenzene, p-xylene and o-xylene were 919 ± 44, 2051 ± 91, 3838 ±19, 4245 41 and 3576 ± 49, respectively. The cancer risk for adult males and females in a typical SA household exposure scenario, was found to be 1.1 -1.2 and 110-120 folds higher than the US EPA designated risk severity indicator (1E-6), respectively. All four TEX compounds recorded the Hazard Quotient (HQ) of less than 1, indicating a low risk of developing related non-carcinogenic health effects. The HQ for TEX ranged from 0.001– 0.05, with toluene concentrations being the lowest and ethylbenzene the highest. This study has demonstrated that domestic coal burning may be a significant source of BTEX emission exposure.
Modeling Traffic Accident Occurrence at Hazardous Road Locations: A Case Study in Tunisia
Authors: Ouni Fedy , Belloumi Mounir
Published: November 2018

The purpose of the present study is to explore the linkage between Hazardous Road Locations-based crash counts and a variety of geometric characteristics, roadway characteristics, traffic flow characteristics and spatial features in the region of Sousse, Tunisia. For this purpose, collision data was collected from at 52 hazardous road sections including 1397 crash records for a 11-year monitoring period from January 1, 2004 to December 31, 2014 obtained from National Observatory for Information, Training, Documentation and Studies on Road Safety in Tunisia (NOITDRS). The matrix of Pearson correlation was used in order to avoid inclusion of both variables, which were highly correlated. Both the Random Effects Negative Binomial model and the Negative Binomial model were estimated. To evaluate the models, the Random Effect Negative Binomial model improves the goodness-of-fit compared to the Negative Binomial model. Average Daily Traffic volume, Curved alignment, Presence of public lighting, Visibility, Number of lane, Presence of vertical/horizontal sign, Presence of rural segment, Presence of drainage system, Roadway surface condition, Presence of paved shoulder and presence of major road were found as significant variables influencing accident occurrences. Overall, the current research contributes to the literature from empirical, modeling methodological standpoints since it was the first study conducted in Tunisia to use crash prediction models for hazardous road locations, and that portrays Tunisian reality. The research findings present advantageous insights on hazardous road locations in the region of Sousse, Tunisia and present useful planning tools for public authorities in Tunisia.
A Randomized Watermarking Technique for Detecting Malicious Data Injection Attacks in Heterogeneous Wireless Sensor Networks for Internet of Things Applications
Authors: Alromih Arwa , Al-Rodhaan Mznah , Tian Yuan
Published: November 2018

Using Internet of Things (IoT) applications has been a growing trend in the last few years. They have been deployed in several areas of life including secure and sensitive sectors like military and health. In these sectors, sensory data is the main factor in any decision-making process. This introduces the need to ensure the integrity of data. Secure techniques are needed to detect any data injection attempt before catastrophic effects happen. Sensors have limited computational and power resources. This limitation creates a challenge to design a security mechanism that is both secure and energy-efficient. This work presents a Randomized Watermarking Filtering Scheme (RWFS) for IoT applications that provides en-route filtering to get rid of any injected data at an early stage of the communication. Filtering injected data is based on a watermark that is generated from the original data and embedded directly in random places throughout the packet's payload. The scheme uses homomorphic encryption techniques to conceal the report's measurement from any adversary. The advantage of homomorphic encryption is that it allows the data to be aggregated and, thus, decreases the packet's size. The results of our proposed scheme proved that it improves the security and energy consumption of the system as it mitigates some of the limitations in the existing works.
Species and Bio-Availability of Inorganic and Organic Phosphorus in Primary, Secondary and Digested Sludge
Authors: Zhang Shaoxiang , Huang Wenli , Liu Dongfang
Published: November 2018

The species and bio-availability of phosphorus (P) in primary, secondary and digested sludge were fractionated and further analyzed in this study. Results showed that inorganic P (IP) was the primary P fraction in the secondary sludge and digested sludge, in which non-apatite IP (NAIP) amounted to 91.6% and 69.3% of IP, respectively. Organic P (OP), accounting for about 71.7% of total P (TP), was the dominant P composition in primary sludge. The content of bio-available P was about 9.7, 43.4, 29.8 mg-P/g-TS in primary sludge, secondary sludge and digested sludge, respectively, suggesting secondary sludge is the optimal choice when land application of sewage sludge is taken into consideration, followed by digested sludge and primary sludge. Polyphosphate and orthophosphate, comprising approximately 54.3% and 89.2% of TP, was the dominant P species in the secondary sludge and digested sludge, respectively. Monoester-P (54.6% of TP in extract) and diester- P (24.1%) were identified as OP species in primary sludge by Phosphorus-31 nuclear magnetic resonance (31PNMR). The present results would be helpful for P recovery and recycle from sewage sludge in wastewater treatment plant.
Towards the Understanding of Ice Crystal-graupel Collision Charging in Thunderstorm Electrification
Authors: He Yuanping , Gu Boyan , Zhang Daizhou , Lu Weizhen , Yu Chuck Wah , Gu Zhaolin
Published: November 2018

Thunderstorm electrification has been studied for hundreds of years. Several mechanisms have been proposed to elucidate the electrification, including convective charging, inductive precipitation charging, and ice crystal-graupel collision charging. Field observations and model studies have demonstrated the vital roles that graupel and ice crystals play in the electrification, but the mechanism of the collision charging is still unclear. The fundamental essence of relative growth rate theory used for explaining the tripole charge structure in thunderclouds also needs a further exploration. We analyze the processes of ice crystal-graupel collision charging from charge migration inside hydrometeors to charge separation between two hydrometeors. The driving effects of temperature gradient and chemical potential gradient in charge migration are clarified, as well as the applicability of the relative growth rate theory, thermoelectric effect and surface tension gradient in different humidities. Based on the understanding from these electrification mechanisms, we propose that the essence of charge separation is driven by non-thermal equilibrium, and future studies on thunderstorm electrification should focus on the dynamical non-thermal equilibrium of cloud particles.
Biometric Authentication and Verification for Medical
Cyber Physical Systems
Authors: HAYAJNEH ABDULLAH Saleh , Baccarini Alessandro , Weiss Gary , Hayajneh Thaier , Farajidavar Aydin
Published: November 2018

A Wireless Body Area Network (WBAN) is a network of wirelessly connected sensing and actuating devices. WBANs used for recording biometric information and administering medication are classified as part of a Cyber Physical System (CPS). Preserving user security and privacy is a fundamental concern of WBANs, which introduces the notion of using biometric readings as a mechanism for authentication. Extensive research has been conducted regarding the various methodologies (e.g. ECG, EEG, gait, head/arm motion, skin impedance). This paper seeks to analyze and evaluate the most prominent biometric authentication techniques based on accuracy, cost, and feasibility of implementation. We suggest several authentication schemes which incorporate multiple biometric properties.
Associations between the Duration and Frequency of Sedentary Bouts and Adiposity in Elderly Community-Dwelling Women
Authors: Pechová Jana , Pelclová Jana , Gába Aleš , Zając-Gawlak Izabela , Tlučáková Lenka , Dygrýn Jan , Svozilová Zuzana , Lepková Hana
Published: November 2018

Background: This study aimed to describe the frequency and duration of sedentary bouts and assess the bidirectional cross-sectional associations between these characteristics and adiposity in elderly women. Methods: Data from 314 elderly community-dwelling women (mean age 66.6±6.5 years) from Czech Republic, Poland, and Slovakia were analyzed. Measures were collected in 2008–2017. Fat mass percentage (FM%) was used as an indicator of adiposity. The patterns of sedentary behaviour were monitored using an accelerometer, and ≥5, ≥10, ≥20, ≥30, ≥40, and ≥60 minute bouts were analyzed. The exponent alpha was also calculated to express the accumulation of sedentary time in bouts. We performed a multiple linear regression analysis to assess the bidirectional causal association between variables. Results: There was a significant association of FM% with time spent in bouts with a duration ≥5, ≥10, ≥20min (β ranging 0.11–0.28, p≤0.01) and the frequency of bouts with a length ≥5, ≥10, ≥20, and ≥30min (β ranging 0.03–0.74, p≤0.05) in fully-adjusted models. In contrast, a strong negative association was observed between FM% and alpha (bout distribution) in both directions (p≤0.001). Conclusions: Our results suggest that the sedentary characteristics such as bout duration, bout frequency, and distribution (alpha) are bidirectionally associated with adiposity and they should be considered in further research in older adults.
Modular Uniform Convexity of Lebesgue Spaces of Variable Integrability
Authors: Bachar Mostafa , Mendez Osvaldo , Bounkhel Messaoud
Published: November 2018

We analyze the modular geometry of the variable exponent Lebesgue space Lp(.). We show that Lp(.) possesses a modular uniform convexity property. Part of the novelty is that the property holds even in the case supp(x) = ∞ . We present specific applications to fixed point theory. xÆΩ
Consumption in Russia: Real Values and Impact on GDP
Authors: Borodachev S. M.
Published: November 2018

This paper based on systems - theoretic approach to the definition of a country's GDP as not directly observable characteristic of system state. Leontief dynamic model is generalized to take into account the stimulating effect of consumption on GDP growth. In consumption, apart from final consumption, terms are considered: balance of foreign trade, fictitious investments and hidden costs. The Kalman filter uses Rosstat's gross output (for system output) and final consumption (for system control) data from 1995 to 2015. It is concluded that if in the years 2014, 2015 it was possible to increase consumption by 5% by, say, price cuts or some increase in money supply, then GDP would be greater by about 2.5%. GDP real values in recent years are most likely greater than official values. Fictitious investments and hidden costs are found in the amount of up to third the value of final consumption. The accuracy of one-year forecasts of true GDP by the methodology of this article is approximately 1.5%.
Synthesis and Structure-Activity Relationships of Resorcinol Derivatives as Highly Potent Tyrosinase Inhibitors
Authors: Zhou You , Li Qihang , Fu Ronggeng , Yang Hongyu , Mo Jun , Chen Yao , Xia Qingyou
Published: November 2018

Compounds with tyrosinase inhibitory efficacy could be effective as depigmenting agents. Although a large number of natural and synthetic tyrosinase inhibitors have been reported, few of them are used as skin-whitening agents due to poor activity and safety concerns. 3-(2,4-Dihydroxyphenyl)propionic acid (DPPA), a naturally occurring compound isolated from Ficus carica, was previously discovered as a moderate tyrosinase inhibitor. In this study, the structure-activity relationship study of DPPA was conducted. Compound 3g, with the 2,4-resorcinol subunit and terminal hydrophobic di-butylamino group, was identified with low nanomolar enzymatic IC50 value. Additionally, compound 3g could effectively reduce melanin levels in B16-F10 melanoma cells treated with α-melanocyte-stimulating hormone (α-MSH) without affecting cell viability and proliferation. All these results indicated that compound 3g could be considered as a promising candidate for the treatment of diseases associated with hyperpigmentation.
Experimental and theoretical study on the synergistic inhibition effect of yridine derivatives and sulfur-containing compounds on the corrosion of carbon steel in CO2-saturated 3.5 wt.% NaCl solution
Authors: Tang Junlei , Hu Yuxin , Han Zhongzhi , Wang Hu , Zhu Yuanqiang , Wang Yuan , Nie Zhen , Wang Yingying
Published: November 2018

The corrosion inhibition performance of pyridine derivatives (4-methylpyridine and its quaternary ammonium salts) and sulfur-containing compounds (thiourea and mercaptoethanol) with different molar ratios on carbon steel in CO2-saturated 3.5 wt.% NaCl solution was investigated by weight loss, potentiodynamic polarization, electrochemical impedance spectroscopy and scanning electron microscopy. The synergistic corrosion inhibition mechanism of mixed inhibitors was elucidated by the theoretical calculation and simulation. The molecule of pyridine derivatives compound with larger volume has the priority to adsorb on the metal surface, while the molecules of sulfur-containing compounds with smaller volume fill in vacancies. A dense adsorption film would be formed when 4-PQ and sulfur-containing compounds are added at a proper mole ratio.
Identification of Novel Inhibitors of Pteridine Reductase 1 in Trypanosoma brucei via Computational Structure-Based Approaches and In Vitro Inhibition Assays
Authors: Kimuda Magambo Phillip , Laming Dustin , Hoppe Heinrich C. , Tastan Bishop Özlem
Published: November 2018

Pteridine reductase 1 is a trypanosomatid multifunctional enzyme that provides a mechanism for escape of Dihydrofolate reductase (DHFR) inhibition. This is because PTR1 can reduce pterins and folates. Trypanosomes require folates and pterins for survival and are unable to synthesize them de novo. Currently there are no anti-folate based Human African Trypanosomiasis (HAT) chemotherapeutics in use. Thus, successful dual inhibition of TbDHFR and TbPTR1 has implications in the exploitation of anti-folates. We carried out molecular docking of a ligand library of 5742 compounds against TbPTR1 and identified 18 compounds showing promising binding modes. The protein-ligand complexes were subjected to Molecular dynamics to characterize their molecular interactions and energetics followed by in vitro testing. In this study, we identified five potential TbPTR1 inhibitors that showed low micromolar Trypanosome growth inhibition in in vitro experiments with no significant human cell cytotoxicity. Compounds RUBi004, RUBi007, RUBi014, and RUBi018 displayed moderate to strong antagonism when used in combination with the known TbDHFR inhibitor, WR99210. This gave an indication that the compounds might inhibit both TbPTR1 and TbDHFR. RUBi016 showed an additive effect in the isobologram assay. Our results provide a basis for scaffold optimization for further studies in the development of HAT antifolates.
Genome-Wide Association Studies for Pasmo Resistance in Flax (Linum Usitatissimum L.)
Authors: He Liqiang , Xiao Jin , Rashid Khalid Y. , Yao Zhen , Li Pingchuan , Jia Gaofeng , Wang Xiue , Cloutier Sylvie , You Frank
Published: November 2018

Pasmo is one of the most widespread diseases threatening flax production. To identify genetic regions associated with pasmo resistance (PR), a genome-wide association study was performed on 370 accessions from the flax core collection. Evaluation of pasmo severity was performed in the field from 2012 to 2016 in Morden, MB, Canada. Genotyping-by-sequencing has identified 258,873 single nucleotide polymorphisms (SNPs) distributed on all 15 flax chromosomes. Marker-trait associations were identified using ten different statistical models. A total of 692 unique quantitative trait nucleotides (QTNs) associated with 500 putative quantitative trait loci (QTL) were detected from six phenotypic PR datasets (five individual years and average across years). Different QTNs were identified with various statistical models and from individual PR datasets, indicative of the complementation between analytical methods and/or genotype × environment interactions of the QTL effects. The single-locus models tended to identify large-effect QTNs while the multi-loci models were able to detect QTNs with smaller effects. Among the putative QTL, 67 had large effects (3-23%), were stable across all datasets and explained 32-64% of the total variation for PR in the various datasets. Forty-five of these QTL spanned 85 resistance gene analogs including a large toll interleukin receptor, nucleotide-binding site, leucine-rich repeat (TNL) type gene cluster on chromosome 8. The number of positive effect QTL (NPQTL) in accessions was significantly correlated with PR (R2=0.55), suggesting additive effects. NPQTL was also significantly associated with morphotype (R2=0.52) and  major positive effect QTL were present in the fiber type accessions. The 67 large effect QTL are suited for marker-assisted selection and the 500 QTL for effective genomic prediction in PR molecular breeding.
Integration of Web APIs and Linked Data using SPARQL Micro-Services. Application to Biodiversity Use Cases
Authors: Michel Franck , Faron Zucker Catherine , Gargominy Olivier , Gandon Fabien
Published: November 2018

In recent years, Web APIs have become a de facto standard for exchanging machine-readable data on the Web. Despite this success though, they often fail in making resource descriptions interoperable due to the fact that they rely on proprietary vocabularies that lack formal semantics. The Linked Data principles similarly seek the massive publication of data on the Web, yet with the specific goal of ensuring semantic interoperability. Given their complementary goals, it is commonly admitted that cross-fertilization could stem from the automatic combination of Linked Data and Web APIs. Towards this goal, in this paper we leverage the micro-service architectural principles to define a SPARQL Micro-Service architecture, aimed at querying Web APIs using SPARQL. A SPARQL micro-service is a lightweight SPARQL endpoint that provides access to a small, resource-centric, virtual graph. In this context, we argue that full SPARQL Query expressiveness can be supported efficiently without jeopardizing servers availability. Furthermore, we demonstrate how this architecture can be used to dynamically assign dereferenceable URIs to Web API resources that do not have URIs beforehand, thus literally ``bringing'' Web APIs into the Web of Data. We believe that the emergence of an ecosystem of SPARQL micro-services published by independent providers would enable Linked Data-based applications to easily glean pieces of data from a wealth of distributed, scalable and reliable services. We describe a working prototype implementation and we finally illustrate the use of SPARQL micro-services in the context of two real-life use cases related to the biodiversity domain, developed in collaboration with the French National Museum of Natural History.
Effects of Pulsed Electric Fields on Antioxidant Activity and Microbial Activity in Orange Juice
Authors: Dróżdż Tomasz , Kiełbasa Paweł , Nawirska-Olszańska Agnieszka , Dziadek Kinga , Kukiełka Ewelina , Oczkowicz Jarosław , Oziembłowski Maciej
Published: November 2018

The present study was conducted on the Ertec SU-1 sterilizer, a device designed to test sterilization processes of food samples using pulsed electric fields (PEF) of high intensity and for rapid sterilization of biological samples at low temperatures. The operation of the sterilizer is based on electro-perforation of the cell membrane. The aim of the paper is to show that the PEF method increases the concentration of polyphenolic compounds and decreases the antioxidant activity. Orange juice was used as a material to eliminate growth of microorganisms contained in it. The microorganisms were exposed to pulsed electric fields. The study results proved that a certain number of PEF pulses definitively eliminated microorganisms in the examined material.
HOLMeS: eHealth in the Big Data and Deep Learning Era
Authors: Amato Flora , Marrone Stefano , Moscato Vincenzo , Piantadosi Gabriele , Picariello Antonio , Sansone Carlo
Published: November 2018

Data collection and analysis are becoming more and more important in a variety of application domains as long as the novel technologies advance. At the same time, we are experiencing a growing need for human-machine interaction with expert systems pushing research through new knowledge representation models and interaction paradigms. In particular, in the last years eHealth - that indicates all the health-care practices supported by electronic elaboration and remote communications - calls for the availability of smart environment and big computational resources. The aim of this paper is to introduce the HOLMeS (Health On-Line Medical Suggestions) framework. The introduced system proposes to change the eHealth paradigm where a trained machine learning algorithm, deployed on a cluster-computing environment, provides medical suggestion via both chat-bot and web-app modules. The chat-bot, based on deep learning approaches, is able to overcome the limitation of biased interaction between users and software, exhibiting a human-like behavior. Results demonstrate the effectiveness of the machine learning algorithms showing 74.65% of Area Under ROC Curve (AUC) when first-level features are used to assess the occurrence of different prevention pathways. When disease-specific features are added, HOLMeS shows 86.78% of AUC achieving a more specific prevention pathway evaluation.
Regional Temporal and Spatial Trends in Drought and Flood Disasters in China and Assessment of Economic Losses in Recent Years
Authors: Chou Jieming , Xian Tian , Dong Wenjie , Xu Yuan
Published: November 2018

Understanding the distribution in drought and floods plays an important role in disaster risk management. The present study aims to explore the trends in the standardized precipitation index and extreme precipitation days in China, as well as to estimate the economic losses they cause. We found that in the Northeast China, northern of North China and northeast of Northwest China were severely affected by drought disasters (average damaged areas were 6.44 million hectares) and the most severe drought trend was located in West China. However, in the north of East China and Central China, the northeastern of the Southwest China was severely affected by flood disasters (average damaged areas were 3.97 million hectares) and the extreme precipitation trend is increasing in the northeastern of the Southwest China. In the Yangtze River basin, there were increasing trends in terms of drought and extreme precipitation, especially in the northeastern of the Southwest China, where accompanied by severe disaster losses. By combining the trends in drought and extreme precipitation days with the distribution of damaged areas, we found that the increasing trend in droughts shifted gradually from north to south, especially in the Southwest China, and the increasing trend in extreme precipitation gradually shifted from south to north.
Evidence of Landau Damping in a Fluid Coupled with an Anharmonic Lattice
Authors: Ludu Andrei , Padilla Eric , Mazumder M. A. Qaayum
Published: November 2018

The Landau damping effect was observed in collisionless plasma, as a microscopic resonant mechanism between electromagnetic radiation and the collective modes. In this paper we demonstrate the occurrence of the Landau damping at macroscopic scale in the interaction between water waves and anharmonic lattice of magnetic buoys. By coupling the Navier-Stokes equations for incompressible fluid with the nonlinear dynamics of an anharmonic magnetic lattice we obtain a resonant transfer of momentum and energy between the two systems. The velocity of the flow is obtained in the Stokes approximation with Basset type of drag force. The dynamics of the buoys is calculated in the surfactant approximation for a specific frequency, then we use Fourier analysis to obtain the general time variable interaction. After involving an integral Dirichlet transform we obtain the time dependent expression of the drag force, the interaction waves-lattice with a new term in the form of a Caputo fractional derivative. We compare the results of the model with experiments performed in a wave tank with free floating magnetic buoys under the action of small amplitude gravitational waves. This configuration can be applied in studies for the attenuation with resonant damping of rogue waves, storms or tsunamis.
Rapid Thinning at a Glacier Terminus and Icefield of Mt. Tanggula, Tibet, Detected by TOPEX/Poseidon, and Jason-2/-3 Altimeters: Confirmation by Satellite Imagery
Authors: Hwang Cheinway , Wei Shiang-Hung , Cheng Yung-Sheng , Peng Hsin-Ya , Lee Jui-Chi , Tseng Kuo-Hsin , Chi Chiang-Sheng , Lo Yuan-Ni , Wang Qiu-Yu
Published: November 2018

An oceanic radar altimeter such as TOPEX/Poseidon (T/P) is typically for observing elevation changes over the open oceans or large inland lakes/rivers, with limited applications over solid earth due to its large footprint and susceptibility to waveform contamination and slope effect. Here we demonstrate that it is possible to construct a long-term time series of glacier elevation change from T/P-series radar altimeters over two flat surfaces near a glacier terminus and an icefield (Sites A and B, with slopes of 2° and 0.8°) in Mt. Tanggula, Tibet, at elevations over 5400 m. We retracked radar waveforms using the subwaveform threshold algorithm, selected quality altimeter data (1/4 of the original) with nearly the same slope and adjusted the original elevations by fitting with a time-varying, 2nd order surface. The glacier elevation changes at the two sites from T/P (1993–2002) show seasonal elevation oscillations with linear rates at about −3 m/year and abnormal seasonal changes around the 1997–98 El Niño. Site A is over a deep valley in southern Tanggula. Its elevation dropped about 30 m over 1993–2002 (from T/P) and the glacier almost disappeared by 2016 (from altimeters and satellite images). Despite the sporadic Jason-2 and Jason-3 altimeter data, we also derived long-term rates of glacier elevation change over 1993–2017. Landsat-derived glacier area and elevation changes near the two sites confirm the rapid glacier thinning from the altimeters. The glacier meltwater near Site A supplied increasing source water to Chibuzhang Co west of Mt. Tanggula, contributing partially to its accelerated rising lake level. The glacier thinning at Site B (icefield) was correlated with the increased discharge of the Tuotuo River in eastern Mt. Tanggula, a source region of the Yangtze River. The successful detection of glacier thinning at the two sites shows that T/P-series altimeters can serve as a virtual station at a flat glacier spot to monitor long-term glacier elevation changes in connection to climate change. This virtual station concept is particularly useful for inaccessible glaciers, but its implementation faces two challenging issues: increasing the volume of quality altimeter data and improving the ranging accuracy over a targeted mountain glacier spot.
Can Mannose-Binding Lectin Activation Help in Fighting Bacterial Pathogen in Poultry Production Systems?—A Review
Authors: Idowu Peter Ayodeji , Mpayipheli Maliviwe , Muchenje Voster
Published: November 2018

Bacterial pathogens have been attributed to poultry housing structure, financial strength, and incessant use of antibiotics, variable seasons and management systems practiced. Variant forms of bacterial pathogens can be detected by recognizing the molecular pattern of the pathogens through an innate immune mechanism such as mannose-binding lectin. Mannose-binding lectin (MBL) possesses an innate pattern recognition molecule that easily sequestered to region of infections and inflammations. This works by attaching itself to antigen surface thus hinders proliferation and disease activity in the host organism. Baker’s method, nephelometric assays technique, Enzyme-Linked Immunosurbent Assay technique, Polymerase Chain Reaction, Deoxyribonucleic Acid typing and other biotechnology related methods are techniques used in detecting and quantifying MBL. Mannose-binding lectin levels in serum can be influenced by age, management systems, feed formulation strategies and seasons. Therefore, knowledge of MBL should be encouraged in all aspect of poultry production, in order to discourage incessant use of drugs at a slight exposure to prevailing bacterial which can help in maximizing cost.
Phylostratigraphic Analysis Shows the Earliest Origination of the Stress Associated Genes in A. thaliana
Authors: Mustafin Zakhar , Konstantinov Dmitry , Zamyatin Vladimir , Doroshkov Alexey , Lashin Sergey , Afonnikov Dmitry
Published: November 2018

Phylostratigraphic analysis is a way to look anew on phylogenetic data in the evolutionary aspect. It allows counting the evolutionary age based on the analysis of genes, their orthologs and finding the last common ancestor. We performed phylostratigraphic analysis of Arabidopsis thaliana genes associated with several types of abiotic stresses (heat, cold, water-related, light, osmotic, salt, and oxidative) determined by the Gene Ontology annotation. Comparison of the distributions of ages of genes associated with stresses of different type has shown the heat stress to involve older genes while the light stress – younger genes. At the same time, all types of stress are characterized by a significantly higher proportion of old genes (common to all eukaryotes) compared to the whole set of A.thaliana genes. This can be explained by the involvement of basic molecular processes in plant cells into the stress response. Reconstruction and graphical analysis of the gene network of the heat stress educed several clusters associated with different response functions. Some of these clusters contain only ancient genes. The results obtained show that the phylostratigraphic analysis reveals the fundamental features of the organization of gene networks and their evolution.
A Buckypaper Like Adsorbent Based on Amphiphilic Graphite Nanofilaments for Removal of Enzyme Biomolecules from Water
Authors: Homaeigohar Shahin , Elbahri Mady
Published: November 2018

Development of carbon nanomaterials for adsorption thus removal of organic pollutants from water is a progressive research subject. In this regard, carbon nanomaterials with bifunctionality towards polar and non-polar or even amphiphilic undesired materials is indeed attractive for further study and implementation. Here, we created carbon buckypaper adsorbents comprising amphiphilic (oxygenated amorphous carbon (a-COx)/graphite (G)) nanofilaments that can dynamically adsorb organic biomolecules (i.e. urease enzyme) and thus purify the wastewaters of relevant industries. Given the dynamic conditions of the test, the adsorbent was highly efficient in adsorption of the enzyme (88%) while permeable to water (2382 L.h-1.m-2), thus holds a great promise for further development and upscaling. A subsequent citric acid functionalization declined selectivity of the membrane to urease, implying the biomolecules adsorb mostly via graphitic domains rather than oxidized, polar amorphous carbon ones. The devised platform i.e. the urease functionalized buckypaper is optimally conductive (13 S.cm-1) and can be further employed as a biosensor. Accordingly, water treatment can be linked to biosensing via a nanostructured membrane.
Analysing the Role of Visions, Agency and Niches in Historical Transitions in Water Resources Management in the Lower Mississippi River
Authors: van der Voorn Tom , Quist Jaco
Published: November 2018

This paper analyses six major transitions in watershed management in the Lower Mississippi River from the early 19th century till present. A conceptual framework is developed for analysing the role of visions, agency and niches in water management transitions and applied to a historical case on water management in the Lower Mississippi River. It is shown that water management regimes change over time and that major transitions were preceded by niches, in which new visions were developed and empowered. The case shows that: (i) emerging visions play an important role in guiding transitions; (ii) agency enables the further diffusion of visions and niches; (iii) vision champions play an important role in transitions, but are not decisive; (iv) each transition has led to an extension of the number of societal functions provided, which has led to more complex water management regimes in which functions are combined and integrated; and (v) external landscape factors are important, as they can lead to awareness and urgency in important decision making processes.
Localized Surface Plasmons of Gold Nanoparticles
Authors: Mansoor Riyadh
Published: November 2018

In this paper, the far field and near field optical responses of a gold nanoparticle are studied and simulated numerically. The electromagnetic field was excited by an electric dipole located near one end of the nanorod, which is used to model the emission of a quantum dot. Another excitation method was also simulated in which an incident plane wave is used. The excitation of dark plasmon modes of the gold nanorod is presented. The Poynting equation was solved numerically to study the influence of the gold nanorod on the dipole radiative power. In addition, the extinction cross section of the gold nanoparticle illuminated by the incident plane wave was calculated to estimate the amount of the scattered and absorbed light.
Some Bounds on Eigenvalues of the Hadamard Product and the Fan Product of Matrices
Authors: Guo Qianping , Leng Jinsong , Li Houbiao , Cattani Carlo
Published: November 2018

In this paper, some mixed type bounds on the spectral radius $\rho(A\circ B)$ for the Hadamard product of two nonnegative matrices ($A$ and $B$) and the minimum eigenvalue $\tau(C\star D)$ of the Fan product of two $M$-matrices ($C$ and $D$) are researched. These bounds complement some corresponding results on the simple type bounds. In addition, a new lower bound on the minimum eigenvalue of the Fan product of several $M$-matrices is also presented: $$ \tau(A_{1}\star A_{2}\cdots\star A_{m})\geq \min_{1\leq i\leq n}\{\prod^{m}_{k=1}A_{k}(i,i)-\prod^{m}_{k=1}[A_{k}(i,i)^{P_{k}}-\tau(A_{k}^{(P_{k})})]^\frac{1}{P_{k}}\}, $$ where $A_{1},\ldots, A_{k}$ are $n\times n$ $M$-matrices and $P_{1},\ldots, P_{k}>0$ satisfy $\sum^{m}_{k=1}\frac{1}{P_{k}}\geq 1$. Some special cases of the above result and numerical examples show that this new bound improves some existing results.
Hypericum perforatum Extract Mediated Green Synthesis of Ultra-Small Fe2O3 Nanostructures
Authors: Sidorowicz Agnieszka , Maqbool Qaisar , Kachlicki Piotr , Franklin Gregory
Published: November 2018

We report on the synthesis of highly homogenous, oval shaped and ultra-small organometallic Fe2O3-nanostructures (OM-Fe2O3-NS) using H. perforatum leaf extract. Analysis of extracts before and after the synthesis of OM-Fe2O3-NS by ultra-performance liquid chromatography-diode array detection coupled with mass spectrometry (UPLC-DAD-MS) has revealed the active participation of quinic acid, neo-chlorogenic acid, epicatechin, quercetin 3'-malonylglucoside, and hyperforin in the formation of metal organic framework (MOF). OM-Fe2O3-NS were thoroughly investigated for their physico-chemical properties using Transmission electron microscopy (TEM), Atomic force microscopy (AFM), Energy dispersive X-ray analysis (EDX), X-ray diffraction (XRD) analysis, Fourier transform infrared spectroscopy (FTIR), NanoDrop Ultraviolet and visible spectroscopy (UV) and Thermo-gravimetric analysis (TGA). Our results show that H. perforatum secondary metabolites have got a great potential in engineering the next-generation ultra-smart materials.
EFR-Mediated Innate Immune Response in ER α–Glucosidase II rsw3 and UGGT uggt1-1 Arabidopsis thaliana Mutants
Authors: Lia Andrea , Gallo Antonia , Marti Lucia , Roversi Pietro , Santino Angelo
Published: November 2018

Plants offer a simpler and cheaper alternative to mammalian animal models for the study of Endoplasmic Reticulum glycoprotein folding Quality Control (ERQC). In particular, the Arabidopsis thaliana (At) innate immune response to bacterial peptides provides an easy means of assaying ERQC function in vivo. A number of mutants that are useful to study ERQC in planta have been described in the literature, but only for a subset of these mutants the innate immune response to bacterial elicitors has been measured beyond monitoring plant weight and some physio-pathological parameters related to the plant immune response. In order to probe deeper into the role of ERQC in the plant immune response, we monitored expression levels of the PHI-1 and RET-OX genes in the At ER α-Glu II rsw3 and the At UGGT uggt1-1 mutant plants, in response to bacterial peptides elf18 and flg22. The elf18 response was impaired in the rsw3 but not completely abrogated in the uggt1-1 mutant plants, raising the possibility that the latter enzyme is partly dispensable for ERF signalling. In the rsw3 mutant, seedling growth was impaired only by concomitant application of the At ER α-Glu II NB-DNJ inhibitor at concentrations above 500 nM, suggesting residual activity in this mutant. The study highlights the need for extending plant innate immune response studies to assays sampling EFR signalling at the molecular level.