bluuebunny/crossref_metadata_2025 huggingface dataset:
1H-NMR-Based Metabonomics Study to Reveal the Progressive Metabolism Regulation of SAP Deficiency on ApoE−/− Mice
Authors: Li Qian , Chen Wanting , Huang Wenbin , Hou Ranran , Huang Xinping , Xu Man , Que Limei , Wang Lijing , Yang Yongxia
Published: December 2022

Atherosclerosis is the most common disease of the vascular system and the metabolic disorder is one of its important molecular mechanisms. SAP protein is found to be highly expressed in atherosclerotic blood vessels. Our previous study found that SAP deficiency can significantly inhibit the development of atherosclerosis. However, the regulatory effect of SAP deficiency on AS metabolism is unknown. Based on 1H-NMR metabonomics, this study investigated the serum metabolic changes in ApoE−/−;SAP−/− mice compared with ApoE−/− mice during the whole progression of atherosclerosis. The results showed that acetate, pyruvate, choline and VLDL + LDL were statistically regulated to the normal levels as in C57 mice by SAP deficiency in ApoE−/−;SAP−/− mice at 8 w (without obvious plaques). With the appearance and aggravation of atherosclerotic plaques (8 + 4 w and 8 + 8 w), the four metabolites of acetate, pyruvate, choline and VLDL + LDL were continuously regulated, which were denoted as the metabolic regulatory markers of SAP deficiency. We also found that the changes in these four metabolites had nothing to do with high-fat diet. Therefore, it was revealed that SAP deficiency regulated the metabolic disorders in ApoE−/− prior to the appearance of obvious atherosclerotic plaques, which is one of the important mechanisms leading to the inhibition of atherosclerosis, providing a new basis for the application of SAP in atherosclerosis.
Cancer Cachexia and Dysregulated Phosphate Metabolism: Insights from Mutant p53 and Mutant Klotho Mouse Models
Authors: Brown Ronald B.
Published: December 2022

The present perspective article proposes that cachexia, muscle wasting in cancer, is mediated by dysregulated phosphate metabolism and phosphate toxicity that can damage tissues in most major organ systems. A diet high in phosphorus fed to mice deficient in klotho, a cofactor that regulates phosphate metabolism, accelerates aging, sarcopenia, general organ atrophy, kyphosis, and osteoporosis. Similar effects are seen in phenotypes of mutant p53 mice that overexpress the p53 tumor suppressor gene. Although mutant p53 mice do not develop tumors compared to wild-type mice, mutant p53 mice have shorter mean lifespans. Furthermore, tumorigenesis is associated with the sequestration of excessive inorganic phosphate, and dangerous levels of phosphate are released into circulation during tumor lysis syndrome. In total, this evidence implies that tumorigenesis may be a compensatory mechanism that provides protective effects against systemic exposure to dysregulated phosphate metabolism and phosphate toxicity related to cachexia in cancer. Moreover, the hypothetical protection against phosphate toxicity afforded by tumorigenesis also provides an alternate explanation for putative tumor evasion of the immune system. Insights proposed in this perspective paper provide new directions for further research, with potential to develop novel interventions and clinical applications that modify dietary phosphate intake to reduce cachexia in cancer patients.
Ketogenic Diet and Vitamin D Metabolism: A Review of Evidence
Authors: Detopoulou Paraskevi , Papadopoulou Sousana K. , Voulgaridou Gavriela , Dedes Vasileios , Tsoumana Despoina , Gioxari Aristea , Gerostergios George , Detopoulou Maria , Panoutsopoulos George I.
Published: December 2022

The ketogenic diet (KD), which is low in carbohydrates and high to normal in fat and protein, has been traditionally used in epilepsy for the last 100 years. More recently, its application in obesity has been introduced. The present review aimed to investigate the effects of the KD on vitamin D. In total, five studies were done in healthy adults, one in subjects with type 2 diabetes, and seven in subjects with epilepsy that assessed the levels of vitamin D pre- and post-intervention. In the majority of studies, increases in circulating vitamin D were reported. The relationship of the KD with vitamin D was explained through several mechanisms: ketone bodies, macronutrient intake, the status levels of other fat-soluble vitamins, weight loss, changes in the hormonal milieu, and effects on gut microbiota. Moreover, potential nutrient–gene-related interactions were discussed. There is still a need to conduct multiple arm studies to compare the effects of the KD versus other diets and better decipher the particular effects of the KD on vitamin D levels and metabolism. Moreover, differentiations of the diet’s effects according to sex and genetic makeup should be investigated to prescribe KDs on a more personalized basis.
Genetic Polymorphism in Angiotensinogen and Its Association with Cardiometabolic Diseases
Authors: Shahid Momina , Rehman Kanwal , Akash Muhammad Sajid Hamid , Suhail Shaleem , Kamal Shagufta , Imran Muhammad , Assiri Mohammed A.
Published: December 2022

Angiotensinogen (AGT) is one of the most significant enzymes of the renin-angiotensin-aldosterone system (RAAS) which is involved in the regulation and maintenance of blood pressure. AGT is involved in the production of angiotensin I which is then converted into angiotensin II that leads to renal homeostasis. However, various genetic polymorphisms in AGT have been discovered in recent times which have shown an association with various diseases. Genetic polymorphism increases the level of circulating AGT in blood which exaggerates the effects produced by AGT. The associated diseases occur due to various effects produced by increased AGT levels. Several cardiovascular diseases including myocardial infarction, coronary heart disease, heart failure, hypertrophy, etc. are associated with AGT polymorphism. Other diseases such as depression, obesity, diabetic nephropathy, pre-eclampsia, and liver injury are also associated with some variants of AGT gene. The most common variants of AGT polymorphism are M235T and T174M. The two variants are associated with many diseases. Some other variants such as G-217A, A-6G, A-20C and G-152A, are also present but they are not as significant as that of M235T and T174M variants. These variants increase the level of circulating AGT and are associated with prevalence of different diseases. These diseases occur through various pathological pathways, but the initial reason remains the same, i.e., increased level of AGT in the blood. In this article, we have majorly focused on how genetic polymorphism of different variants of AGT gene is associated with the prevalence of different diseases.
The Metabolomic Profile of the Essential Oil from Zanthoxylum caribaeum (syn. chiloperone) Growing in Guadeloupe FWI using GC × GC-TOFMS
Authors: Farouil Lea , Dias Ryan P. , Popotte-Julisson Gianni , Bibian Garrick , Adou Ahissan Innocent , de la Mata A. Paulina , Sylvestre Muriel , Harynuk James J. , Cebrián-Torrejón Gerardo
Published: December 2022

The essential oil (EO) from the leaves of Zanthoxylum caribaeum (syn. Chiloperone) (Rutaceae) was studied previously for its acaricidal, antimicrobial, antioxidant, and insecticidal properties. In prior studies, the most abundant compound class found in leaf oils from Brazil, Costa Rica, and Paraguay was terpenoids. Herein, essential oil from the leaves of Zanthoxylum caribaeum (prickly yellow, bois chandelle blanc (FWI), peñas Blancas (Costa Rica), and tembetary hu (Paraguay)) growing in Guadeloupe was analyzed with comprehensive two-dimensional gas chromatography coupled to time-of-flight mass spectrometry (GC × GC-TOFMS), and thirty molecules were identified. A comparison with previously published leaf EO compositions of the same species growing in Brazil, Costa Rica, and Paraguay revealed a number of molecules in common such as β-myrcene, limonene, β-caryophyllene, α-humulene, and spathulenol. Some molecules identified in Zanthoxylum caribaeum from Guadeloupe showed some antimetabolic effects on enzymes; the in-depth study of this plant and its essential oil with regard to metabolic diseases merits further exploration.
A Novel Cortisol Immunosensor Based on a Hafnium Oxide/Silicon Structure for Heart Failure Diagnosis
Authors: Ben Halima Hamdi , Zine Nadia , Bausells Joan , Jaffrezic-Renault Nicole , Errachid Abdelhamid
Published: December 2022

Assessing cortisol levels in human bodies has become essential to diagnose heart failure (HF). In this work, we propose a salivary cortisol detection strategy as part of an easily integrable lab-on-a-chip for detection of HF biomarkers. Our developed capacitive immunosensor based on hafnium oxide (HfO2)/silicon structure showed good linearity between increasing cortisol concentration and the charge-transfer resistance/capacitance. Moreover, the developed biosensor was demonstrated to be highly selective toward cortisol compared to other HF biomarkers such as tumor necrosis factor (TNF-α) and N-terminal pro-brain natriuretic peptide (NT-proBNP). The precision of our developed biosensor was evaluated, and the difference between the determined cortisol concentration in saliva and its expected one is <18%.
Algorithms for Weld Depth Measurement in Laser Welding of Copper with Scanning Optical Coherence Tomography
Authors: Will Thomas , Massieu Garcia Eduardo , Hoelbling Claudio , Goth Christian , Schmidt Michael
Published: December 2022

In-process monitoring of weld penetration depth is possible with optical coherence tomography (OCT). The weld depth can be identified with OCT by statistical signal processing of the raw OCT signal and keyhole mapping. This approach is only applicable to stable welding processes and requires a time-consuming keyhole mapping to identify the optimal placement of a singular OCT measuring beam. In this work, we use an OCT measurement line for the identification of the weld depth. This approach shows the advantage that the calibration effort can be reduced as the measurement line requires only calibration in one dimension. As current literature focuses on weld depth measurement with a singular measurement point in the keyhole, no optimal algorithm exists for weld depth measurement with an OCT measurement line. We developed seven different weld depth processing pipelines and tested these algorithms under different weld conditions, such as stable deep penetration welding, unstable deep penetration welding, and heat conduction welding. We analyzed the accuracy of the weld depth processing algorithms by comparing the measured weld depth with metallographic weld depths. The intensity accumulation approach is identified as the most accurate algorithm for successful weld depth measurement with a scanning OCT measurement line.
Force and Velocity Analysis of Particles Manipulated by Toroidal Vortex on Optoelectrokinetic Microfluidic Platform
Authors: Zhang Sheng-Jie , Yang Zong-Rui , Kuo Ju-Nan
Published: December 2022

The rapid electrokinetic patterning (REP) technique has been demonstrated to enable dynamic particle manipulation in biomedical applications. Previous studies on REP have generally considered particles with a size less than 5 μm. In this study, a REP platform was used to manipulate polystyrene particles with a size of 3~11 μm in a microfluidic channel sandwiched between two ITO conductive glass plates. The effects of the synergy force produced by the REP electrothermal vortex on the particle motion were investigated numerically for fixed values of the laser power, AC driving voltage, and AC driving frequency, respectively. The simulation results showed that the particles were subject to a competition effect between the drag force produced by the toroidal vortex, which prompted the particles to recirculate in the bulk flow adjacent to the laser illumination spot on the lower electrode, and the trapping force produced by the particle and electrode interactions, which prompted the particles to aggregate in clusters on the surface of the illuminated spot. The experimental results showed that as the laser power increased, the toroidal flow range over which the particles circulated in the bulk flow increased, while the cluster range over which the particles were trapped on the electrode surface reduced. The results additionally showed that the particle velocity increased with an increasing laser power, particularly for particles with a smaller size. The excitation frequency at which the particles were trapped on the illuminated hot-spot reduced as the particle size increased. The force and velocity of polystyrene particles by the REP toroidal vortex has implications for further investigating the motion behavior at the biological cell level.
Experimental Characterization of Laser Trepanned Microholes in Superalloy GH4220 with Water-Based Assistance
Authors: Wang Liang , Yang Huayu , Ren Naifei , Wu Zhengtian , Xia Kaibo
Published: December 2022

An experiment using water-assisted millisecond laser trepanning on superalloy GH4220 was carried out, and the effects of pulse energy on the hole entrance morphology, diameter, roundness, cross-section morphology, taper angle, sidewall roughness, and recast layer in air and with water-based assistance were compared and analyzed. The results show that, compared with the air condition, the water-based assistance improved the material removal rate and hole quality, increased the diameter of the hole entrance and exit, increased the hole roundness, decreased the hole taper angle, decreased the hole sidewall roughness, and reduced the recast layer thickness. In addition, under the combined action of water and steam inside the hole, the sidewall surface morphology quality was improved. Compared with the air condition, the spatter around the hole entrance was reduced, but the oxidation phenomenon formed by the thermal effect surrounding the hole entrance with water-based assistance was more obvious. The research provided technical support for the industrial application of millisecond laser drilling.
Propagation Losses Estimation in a Cationic-Network-Based Hydrogel Waveguide
Authors: Pons Carolina , Galindo Josué M. , Martín Juan C. , Torres-Moya Iván , Merino Sonia , Herrero M. Antonia , Vázquez Ester , Prieto Pilar , Vallés Juan A.
Published: December 2022

A method based on the photographic recording of the power distribution laterally diffused by cationic-network (CN) hydrogel waveguides is first checked against the well-established cut-back method and then used to determine the different contributions to optical power attenuation along the hydrogel-based waveguide. Absorption and scattering loss coefficients are determined for 450 nm, 532 nm and 633 nm excitation. The excellent optical loss values obtained (0.32–1.95 dB/cm), similar to others previously described, indicate their potential application as waveguides in different fields, including soft robotic and light-based therapies.
Stainless Steel Foil-Based Label-Free Modular Thin-Film Electrochemical Detector for Solvent Identification
Authors: Rozman Martin , Lukšič Miha
Published: December 2022

Most organic solvents are colorless liquids, usually stored in sealed containers. In many cases, their identification depends on the appropriate description on the container to prevent mishandling or mixing with other materials. Although modern laboratories rely heavily on identification technologies, such as digitized inventories and spectroscopic methods (e.g., NMR or FTIR), there may be situations where these cannot be used due to technical failure, lack of equipment, or time. An example of a portable and cost-effective solution to this problem is an electrochemical sensor. However, these are often limited to electrochemical impedance spectroscopy (EIS) or voltammetry methods. To address this problem, we present a novel modular electrochemical sensor for solvent identification that can be used with either an EIS-enabled potentiostat/galvanostat or a simple multimeter. A novel method of fabricating and using a sensor consisting of a thin-film coating of an organic substance on a stainless-steel electrode substrate is presented. The differences in the solubility of the thin film in different solvents are used to distinguish between common organic solvents such as water, ethanol, and tetrahydrofuran.
Terahertz Combined with Metamaterial Microfluidic Chip for Troponin Antigen Detection
Authors: Lin Yen-Shuo , Huang Shih-Ting , Hsu Shen-Fu , Tang Kai-Yuan , Yen Ta-Jen , Yao Da-Jeng
Published: December 2022

In this paper, we use terahertz combined with metamaterial technology as a powerful tool to identify analytes at different concentrations. Combined with the microfluidic chip, the experimental measurement can be performed with a small amount of analyte. In detecting the troponin antigen, surface modification is carried out by biochemical binding. Through the observation of fluorescent antibodies, the average number of fluorescent dots per unit of cruciform metamaterial is 25.60, and then, by adjusting the binding temperature and soaking time, the average number of fluorescent dots per unit of cruciform metamaterial can be increased to 181.02. Through the observation of fluorescent antibodies, it is confirmed that the antibodies can be successfully stabilized on the metamaterial and then bound to the target antigen. The minimum detectable concentration is between 0.05~0.1 μg/100 μL, and the concentration and ΔY show a positive correlation of R2 = 0.9909.
The Discovery of Oropharyngeal Microbiota with Inhibitory Activity against Pathogenic Neisseria gonorrhoeae and Neisseria meningitidis: An In Vitro Study of Clinical Isolates
Authors: Akomoneh Elvis Achondou , Laumen Jolein Gyonne Elise , Abdellati Saïd , Van Dijck Christophe , Vanbaelen Thibau , Britto Xavier Basil , Manoharan-Basil Sheeba S. , Kenyon Chris
Published: December 2022

With increasing incidence of pathogenic Neisseria infections coupled with emerging resistance to antimicrobials, alternative approaches to limit the spread are sought. We investigated the inhibitory effect of oropharyngeal microbiota on the growth of N. gonorrhoeae and N. meningitidis and the impact of the essential oil-based mouthwash Listerine Cool Mint® (Listerine). Oropharyngeal swabs from 64 men who have sex with men (n = 118) from a previous study (PReGo study) were analysed (ClinicalTrials.gov, NCT03881007). These included 64 baseline and 54 samples following three months of daily use of Listerine. Inhibition was confirmed by agar overlay assay, and inhibitory bacteria isolated using replica plating and identified using MALDI-TOF. The number of inhibitory isolates were compared before and after Listerine use. Thirty-one pharyngeal samples (26%) showed inhibitory activity against N. gonorrhoeae and/or N. meningitidis, and 62 inhibitory isolates were characterised. Fourteen species belonging to the genera Streptococci and Rothia were identified. More inhibitory isolates were observed following Listerine use compared to baseline, although this effect was not statistically significant (p = 0.073). This study isolated and identified inhibitory bacteria against pathogenic Neisseria spp. and established that daily Listerine use did not decrease their prevalence. These findings could provide a new approach for the prevention and treatment of pharyngeal Neisseria infections.
The Use of Interdisciplinary Approaches to Understand the Biology of Campylobacter jejuni
Authors: Dzianach Paulina A. , Pérez-Reche Francisco J. , Strachan Norval J. C. , Forbes Ken J. , Dykes Gary A.
Published: December 2022

Campylobacter jejuni is a bacterial pathogen recognised as a major cause of foodborne illness worldwide. While Campylobacter jejuni generally does not grow outside its host, it can survive outside of the host long enough to pose a health concern. This review presents an up-to-date description and evaluation of biological, mathematical, and statistical approaches used to understand the behaviour of this foodborne pathogen and suggests future avenues which can be explored. Specifically, the incorporation of mathematical modelling may aid the understanding of C. jejuni biofilm formation both outside and inside the host. Predictive studies may be improved by the introduction of more standardised protocols for assessments of disinfection methods and by assessment of novel physical disinfection strategies as well as assessment of the efficiency of plant extracts on C. jejuni eradication. A full description of the metabolic pathways of C. jejuni, which is needed for the successful application of metabolic models, is yet to be achieved. Finally, a shift from animal models (except for those that are a source of human campylobacteriosis) to human-specific data may be made possible due to recent technological advancements, and this may lead to more accurate predictions of human infections.
Ralstonia solanacearum Facing Spread-Determining Climatic Temperatures, Sustained Starvation, and Naturally Induced Resuscitation of Viable but Non-Culturable Cells in Environmental Water
Authors: Álvarez Belén , López María M. , Biosca Elena G.
Published: December 2022

Ralstonia solanacearum is a bacterial phytopathogen affecting staple crops, originally from tropical and subtropical areas, whose ability to survive in temperate environments is of concern under global warming. In this study, two R. solanacearum strains from either cold or warm habitats were stressed by simultaneous exposure to natural oligotrophy at low (4 °C), temperate (14 °C), or warm (24 °C) temperatures in environmental water. At 4 °C, the effect of temperature was higher than that of oligotrophy, since R. solanacearum went into a viable but non-culturable (VBNC) state, which proved to be dependent on water nutrient contents. Resuscitation was demonstrated in vitro and in planta. At 14 °C and 24 °C, the effect of oligotrophy was higher than that of temperature on R. solanacearum populations, displaying starvation-survival responses and morphological changes which were stronger at 24 °C. In tomato plants, starved, cold-induced VBNC, and/or resuscitated cells maintained virulence. The strains behaved similarly regardless of their cold or warm areas of origin. This work firstly describes the natural nutrient availability of environmental water favoring R. solanacearum survival, adaptations, and resuscitation in conditions that can be found in natural settings. These findings will contribute to anticipate the ability of R. solanacearum to spread, establish, and induce disease in new geographical and climatic areas.
Natural Infections of Potato Plants Grown from Minitubers with Blackleg-Causing Soft Rot Pectobacteriaceae
Authors: van der Wolf Jan , Krijger Marjon , Mendes Odette , Kurm Viola , Gros Jack
Published: December 2022

Information on the infection incidence of blackleg-causing soft rot Pectobacteriaceae (BL-SRP) in potato crops grown from minitubers (PB1-crop) and the distribution of BL-SRP in individual plants was collected during a two-year survey conducted at five potato growers located in the Netherlands. In the last weeks before haulm destruction, leaves, stems, and tubers of 100 or 200 plants were analyzed separately for the presence of Pectobacterium parmentieri, P. brasiliense, P. atrosepticum, and Dickeya spp. Extracted plant parts enriched for BL-SRP were analyzed with TaqMan assays specific for the detection of blackleg-causing BL-SRP. In 2019, low incidences of P. parmentieri (1–6%) in leaves were found at four growing sites. At one farm, reactions were detected in TaqMan assays for D. zeae and D. chrysanthemi in leaves. In 2020, the crops of two growers were largely free from BL-SRP. At one farm, a high infection incidence (21%) was found for D. fangzhongdai in tubers. The isolated pathogen was able to cause potato blackleg. At two other farms, high infection incidences in tubers were found with P. brasiliense (35–39%) and P. parmentieri (12–19%), whereas the incidence of P. brasiliense in leaves was also high (8%). In conclusion, high infection incidences with BL-SRP in potatoes can be found in a PB1 crop at the end of the growing season. Infections in individual plants were found either in tubers or in leaves. The potential sources of initial infection are discussed.
Research on the Homogenization Evaluation of Cemented Paste Backfill in the Preparation Process Based on Image Texture Features
Authors: Yang Liuhua , Li Jincang , Jiao Huazhe , Wu Aixiang , Yin Shenghua
Published: December 2022

In China, cemented paste backfill (CPB) is a common treatment method after the exploitation of basic energy. The homogeneity of slurry influences the performance of CPB. However, the online monitoring and characterization of homogeneity lack relevant technologies and unified standards. This article discusses an online image analysis technique applied to the online monitoring of cemented paste backfill mixing, which is based on the evolution of the texture of images taken at the surface of the mixing bed. First, the grayscale distribution of the image obtained by the high-speed camera in the CPB preparation process was analyzed by Matlab and its variance (s2) was solved, and the texture features of the image were analyzed by the variance of grayscale distribution. Then, a homogeneity discriminant model (cst) was established. The results show that the variance value of the grayscale distribution of the slurry image increases rapidly at first, then gradually decreases, and becomes stable in the final stage since it turns a constant value. When the s2 value tends to be stable, the slurry gradually reaches homogenization, and the discriminant coefficient of paste homogenization based on the homogenization discriminant model reaches 0.05. The homogenization prediction of CPB proves to be consistent with the backfill performance comparison results. The evolution of the texture allows obtaining important information on the evolution of different formulations during mixing, which can be used for intelligent monitoring of CPB preparation process.
Study on the Improved Method for Calculating Traveltime and Raypath of Multistage Fast Marching Method
Authors: Wu Qiong , Mi Hong-Ze , Li Yong-Bo , Li Yan-Gui
Published: December 2022

The traditional Fast Marching Method (FMM) based on the finite-difference scheme can solve the traveltime of first arrivals; however, the accuracy and efficiency of FMM are usually affected by the finite-difference schemes and grid size. The Vidale finite-difference scheme and double-grid technology are adopted to replace the traditional first-order and second-order finite-difference schemes in this paper to improve the computation accuracy and efficiency. The traditional FMM does not provide the corresponding raypath calculation methods, and in view of the interoperability of FMM and the linear travel time interpolation (LTI) method, we introduce the linear interpolation method into FMM ray tracing to compute the raypath and take into consideration the secondary source located inside the grid cell to improve the accuracy and stability of the raypath calculation. With these measures and the application of the multistage approach, we successfully completed the improved Multistage FMM (MFMM) ray tracing, which can track first arrivals and any type of primary and multiple reflection waves. Through the theoretical and actual field model tests, the computation accuracy and efficiency of the improved MFMM are proven to be higher than that under traditional first-order and second-order finite-difference schemes, the correctness and effectiveness of the interpolation method for raypath calculation are verified, and the improved MFMM has demonstrated good adaptability and stability for complex models. The improvements for the MFMM in this paper are successfully applied in two-dimensional cases and need to be extended to three-dimensional situations.
Calcium Carbonate Hexahydrate (Ikaite): History of Mineral Formation as Recorded by Stable Isotopes
Authors: Whiticar Michael J. , Suess Erwin , Wefer Gerold , Müller Peter J.
Published: December 2022

Calcium carbonate hexahydrate (ikaite) is a rare mineral that forms as metastable species in the organic-carbon-rich sediments of the King George Basin, Bransfield Strait, Antarctica, as a consequence of early diagenetic decomposition of organic matter under cold water (−1.4 °C) and high pressure (200 bar) conditions. Large crystals grow in the sediment immediately below the diagenetic transition between microbial sulfate reduction and methanogenesis at ~320 cm below sea floor (bsf). This process is reflected in the dissolved sulfate, total carbon dioxide, and methane concentrations, as well as in the carbon, hydrogen, and oxygen isotope chemistries of the interstitial fluids and dissolved gases of the host sediment. The ikaite crystal faithfully records in its zonal structure the changing carbon isotope ratio of the total dissolved carbon dioxide pool as it gradually diminishes during methanogenesis (δ13Cikaite = −17.5 to −21.4‰). These changes in the crystal’s host environment follow general Rayleigh carbon isotope fractionation. The oxygen isotopes of the ikaite carbonate (δ18Oikaite = 1.46 to 4.45‰) also show a strong zonal distribution, unrelated to temperature of formation, but perhaps controlled by the degree of recrystallization of ikaite to calcite. The crystal water of the ikaite is depleted 11‰ in 2H/1H (VSMOW) relative to the coexisting interstitial water, which is in excellent agreement with the isotope fractionation of other hydrated minerals. In addition to the in situ temperature and pressure, nucleation of the ikaite crystals in the Bransfield Basin sediments may be induced by the high alkalinity, high phosphate concentrations, and dissolved organic compounds. Intense microbial metabolism generates such compounds; of these, aspartic acid and glutamic acid may play an important role, as they do in biological and extracellular carbonate mineral precipitation. All indications are that low temperatures (such as of polar environments), high calcium carbonate supersaturation caused by interstitial methanogenesis, and a sufficiently large supply of dissolved phosphate and amino acids favor metastable ikaite formation. These conditions, modified by recrystallization, may be preserved in calcite glendonites, thinolites, and other calcitic pseudomorphs derived from ikaite and found throughout the ancient sedimentary record.
Spinodal Decomposition in Natural Bornite–Chalcopyrite Intergrowths: A Way of Cu-(Fe)-Sulfide Mineral Growth
Authors: Liu Rui , Zuo Lei , Zhang Peng , Tao Dongping , Shao Huaizhi , Tao Gang , Wang Kun
Published: December 2022

Spinodal decomposition is an important mechanism of exsolution. However, spinodal decomposition has not been observed in natural sulfide intergrowths. We utilized focused ion beam (FIB) and transmission electron microscopy (TEM) techniques to confirm spinodal decomposition in natural sulfide intergrowths (chalcopyrite and bornite). According to FIB and TEM analyses, spinodal decomposition occurred as small and curving alternating dark and bright fluctuations in natural bornite–chalcopyrite intergrowths. Due to the low temperature that drove the exsolution mechanism, fluctuations ~10 nm wide and 20–200 nm long contained non-stoichiometric and tetragonal bornite and chalcopyrite. The corresponding electron diffraction of spinodal decomposition displayed a satellite spot in the [−210] direction for bornite, and the (200)* and (224)* of chalcopyrite paralleled the (24−2)* and (242)* of bornite, respectively. These observations all agreed with spinodal decomposition, two coexisting phases formed with a crystallographic orientation relationship, which indicated the first observation of spinodal decomposition in natural sulfide intergrowths. These findings confirmed that spinodal decomposition is a mechanism for natural crystal growth. As spinodal decomposition is larger in extent and faster than nucleation and growth, other Cu ore deposits may also form via this mechanism.
Empirical Modeling of Transverse Displacements of Single-Sided Transversely Cracked Prismatic Tension Beams
Authors: Skrinar Matjaž
Published: December 2022

While the effects of axial compression on beams have long been known, the effect of tensile axial loads on one-sided transversely cracked beams is less known. The crack namely shifts the position of the resultant of the axial normal stresses deeper into the uncracked part of the cross-section, and the crack tends to open, causing a transverse displacement. Therefore, this paper focuses on empirical modeling of the considered phenomenon for slender prismatic beams in order to establish a suitable 1D computational model based on detailed 3D FE mesh results. This goal can be achieved through the already established simplified model, where the crack is represented by an internal hinge endowed with a rotational spring. Several analyses of various beams differing in geometry, crack locations, and boundary conditions were executed by implementing 3D FE meshes to establish the appropriate model’s bending governing differential equation. After that, the corresponding parameter definitions were calibrated from the database of 3D FE models. By redefining the model’s input parameters, a suitable solution is achieved, offering a good balance between the results’ accuracy and the required computational effort. The functionality of the newly obtained solutions was verified through some comparative case studies that supplement the derivations.
Rapid Analysis of Aristolochic Acids and Aristolactams in Houttuyniae Herba by LC–MS/MS
Authors: Wu Yingxue , Liu Jing , Kang Shuai , Dai Zhong , Ma Shuangcheng
Published: December 2022

Houttuyniae herba, the Saururaceae plant Houttuynia cordata Thunb., has multiple therapeutic effects, including clearing heat, eliminating toxins, reducing swelling, discharging pus, and relieving stagnation. It has a long history as an edible and medicinal plant in China. Phytochemical studies show that the main constituents include volatile oil, flavonoids, and alkaloids. Aristolactam is a major alkaloid with a structure similar to toxic aristolochic acids. However, there has been no systematic study on aristolochic acids and alkaloids in Houttuyniae herba. Therefore, in this study, an LC–MS/MS method was developed to simultaneously detect seven alkaloids and five aristolochic acids in Houttuyniae herba from different origins. Six alkaloids (O-demethyl nornucifrine, N-nornucifrine, aristololactam AII, aristololactam FI, aristololactam BII, cepharadione B) were found and quantitatively determined in 75 batches of samples. Meanwhile, no aristolochic acids or aristololactams were found in Houttuyniae herba at a limit of detection (LOD) of ≤4 ng/mL. The method developed was fully validated in terms of LOD, limit of quantification (LOQ), linearity, precision, accuracy, and stability. These data clarify the content of the above safety-related components in Houttuyniae herba and provide a reference for further research into its safety.
Farming for Pharming: Novel Hydroponic Process in Contained Environment for Efficient Pharma-Grade Production of Saffron
Authors: Nardi Luca , Metelli Giulio , Garegnani Marco , Villani Maria Elena , Massa Silvia , Bennici Elisabetta , Lamanna Raffaele , Catellani Marcello , Bisti Silvia , Maggi Maria Anna , Demurtas Olivia C. , Benvenuto Eugenio , Desiderio Angiola
Published: December 2022

Soilless cultivation of saffron (Crocus sativus) in a controlled environment represents an interesting alternative to field cultivation, in order to obtain a standardized high-quality product and to optimize yields. In particular, pharma-grade saffron is fundamental for therapeutic applications of this spice, whose efficacy has been demonstrated in the treatment of macular diseases, such as Age-related Macular Degeneration (AMD). In this work, a hydroponic cultivation system was developed, specifically designed to meet the needs of C. sativus plant. Various cultivation recipes, different in spectrum and intensity of lighting, temperature, photoperiod and irrigation, have been adopted to study their effect on saffron production. The experimentation involved the cultivation of corms from two subsequent farm years, to identify and validate the optimal conditions, both in terms of quantitative yield and as accumulation of bioactive metabolites, with particular reference to crocins and picrocrocin, which define the ‘pharma-grade’ quality of saffron. Through HPLC analysis and chromatography it was possible to identify the cultivation parameters suitable for the production of saffron with neuroprotective properties, evaluated by comparison with an ISO standard and the REPRON® procedure. Furthermore, the biochemical characterization was completed through NMR and high-resolution mass spectrometry analyses of saffron extracts. The whole experimental framework allowed to establish an optimized protocol to produce pharma-grade saffron, allowing up to 3.2 g/m2 harvest (i.e., more than three times higher than field production in optimal conditions), which meets the standards of composition for the therapy of AMD.
Variability in the Chemical Composition of Myrcia sylvatica (G. Mey) DC. Essential Oils Growing in the Brazilian Amazon
Authors: Costa Jamile Silva da , Freitas Jofre Jacob da Silva , Setzer William N. , da Silva Joyce Kelly R. , Maia José Guilherme S. , Figueiredo Pablo Luis B.
Published: December 2022

Myrcia sylvatica (G. Mey) DC. is known as “insulin plant” because local communities use the infusions of various organs empirically to treat diabetes. The leaves of seven specimens of Myrcia sylvatica (Msy-01 to Msy-07) were collected in the Brazilian Amazon. Furthermore, the essential oils were extracted by hydrodistillation and analyzed by gas chromatography coupled to mass spectrometry, and their chemical compositions were submitted to multivariate analysis (Principal Component Analysis and Hierarchical Cluster Analysis). The multivariate analysis displayed the formation of four chemical profiles (chemotypes), described for the first time as follows: chemotype I (specimen Msy-01) was characterized by germacrene B (24.5%), γ-elemene (12.5%), and β-caryophyllene (10.0%); chemotype II (specimens Msy-03, -06 and -07) by spathulenol (11.1–16.0%), germacrene B (7.8–20.7%), and γ-elemene (2.9–7.6%); chemotype III (Msy-04 and -05) by spathulenol (9.8–10.1%), β-caryophyllene (2.5–10.1%), and δ-cadinene (4.8-5.6%); and chemotype IV, (Msy-02) by spathulenol (13.4%), caryophyllene oxide (15.0%), and α-cadinol (8.9%). There is a chemical variability in the essential oils of Myrcia sylvatica occurring in the Amazon region.
Different Behavior of 2-Substituted 3-Nitro-2H-chromenes in the Reaction with Stabilized Azomethine Ylides Generated from α-Iminoesters
Authors: Kochnev Ivan A. , Barkov Alexey Y. , Simonov Nikita S. , Ulitko Maria V. , Zimnitskiy Nikolay S. , Korotaev Vladislav Y. , Sosnovskikh Vyacheslav Y.
Published: December 2022

The AgOAc-catalysed reaction of 3-nitro-2-phenyl-2H-chromenes with stabilized azomethine ylides generated from the imines based on methyl glycinate and arylaldehydes leads to a mixture of endo and endo’ isomers of the corresponding chromeno[3,4-c]pyrrolidines in a ratio of 2.0–2.3:1 in 85–93% total yields as a result of a Michael addition/Mannich reaction sequence. In a similar reaction involving 2-trifluoromethyl-3-nitro-2H-chromenes, only endo chromeno[3,4-c]pyrrolidines are formed in 85–94% yields. 3-Nitro-2-(trichloromethyl)-2H-chromenes under the same conditions react with these azomethine ylides to give the corresponding Michael adducts as individual anti-isomers with the cis,trans-configuration of the chromane ring in 40–67% yields. Some 4-CF3-substituted chromano[3,4-c]pyrrolidines exhibited high cytotoxic activity against HeLa human cervical carcinoma cells.
Extraction and Purification of Flavonoids from Buddleja officinalis Maxim and Their Attenuation of H2O2-Induced Cell Injury by Modulating Oxidative Stress and Autophagy
Authors: Wei Shaofeng , Liu Xiaoyi , Hasan K. M. Faridul , Peng Yang , Xie Jiao , Chen Shuai , Zeng Qibing , Luo Peng
Published: December 2022

Cataracts are an ailment representing the leading cause of blindness in the world. The pathogenesis of cataracts is not clear, and there is no effective treatment. An increasing amount of evidence shows that oxidative stress and autophagy in lens epithelial cells play a key role in the occurrence and development of cataracts. Buddleja officinalis Maxim flavonoids (BMF) are natural antioxidants and regulators that present anti-inflammatory and anti-tumor effects, among others. In this study, we optimized the extraction method of BMFs and detected three of their main active monomers (luteolin, apigenin, and acacetin). In addition, a model of oxidative damage model using rabbit lens epithelial cells induced by hydrogen peroxide (H2O2). By detecting the levels of superoxide dismutase (SOD), glutathione peroxidase (GSH-Px), malondialdehyde (MDA), and OH (OH), the expression of autophagosomes and autolysosomes were observed after MRFP-GFP-LC3 adenovirus was introduced into the cells. Western blotting was used to detect the expression of Beclin-1 and P62. Our research results showed that the optimal extraction parameters to obtain the highest yield of total flavonoids were a liquid–solid ratio of 1:31 g/mL, an ethanol volume fraction of 67%, an extraction time of 2.6 h, and an extraction temperature of 58 °C. Moreover, the content of luteolin was 690.85 ppb, that of apigenin was 114.91 ppb, and the content of acacetin was 5.617 ppb. After oxidative damage was induced by H2O2, the cell survival rate decreased significantly. BMFs could increase the levels of superoxide dismutase (SOD) and glutathione peroxidase (GSH-Px) and decrease the levels of malondialdehyde (MDA) and OH (OH). After the MRFP-GFP-LC3 virus was introduced into rabbit lens epithelial cells and detecting the expression of P62 and Beclin-1, we found that the intervention of BMF could promote the binding of autophagosomes to lysosomes. Compared with the model group, the level of P62 in the low-, middle-, and high-dose groups of BMF was significantly down-regulated, the level of Beclin-1 was significantly increased, and the difference was statistically significant (p < 0.05). In other words, the optimized extraction method was better than others, and the purified BMF contained three main active monomers (luteolin, apigenin, and acacetin). In addition, BMFs could ameliorate the H2O2-induced oxidative damage to rabbit lens cells by promoting autophagy and regulating the level of antioxidation.
Bioactive Properties of Extracts from Plectranthus barbatus (Coleus forskohlii) Roots Received Using Various Extraction Methods
Authors: Kulbat-Warycha Kamila , Oracz Joanna , Żyżelewicz Dorota
Published: December 2022

The aim of this study was to verify various extraction methods: shaking water bath extraction (SWA), ultrasound-assisted extraction (UAE) and microwave assisted extraction (MAE), and their parameters to optimize the extraction yield as well as maximize the concentration of polyphenols in Plectranthus barbatus extracts. Extracts were obtained from dried roots of P. barbatus in various degrees of fragmentation and analyzed for content of polyphenols, antioxidant capacity and flavonoids. Additionally, phenolic compounds in extracts were analyzed using the UHPLC–DAD–ESI–MS/MS method. The conducted research showed that roots of P. barbatus are rich in polyphenolic compounds. A total of 15 phenolic compounds, belonging to the group of phenolic acids and their derivatives, were identified. The extraction yield was similar for all extraction methods and averaged 31%. Irrespective of the extraction method, the yield was the lowest in the case of using 80% ethanol as the solvent. The extracts obtained from the finer fraction were characterized by a higher antioxidant capacity as well as a higher concentration of polyphenolic compounds including flavonoids. UAE seems to be the most effective method for extraction of polyphenols from P. barbatus roots. Regardless of the extraction method, ethanol was a better extractant than distilled water. All ethanolic extracts were characterized by a high antioxidant capacity. The 80% ethanol solution was considered the best solvent for the extraction of flavonoids, while the 40% and 60% ethanol solutions were sufficient for the effective extraction of polyphenolic compounds in general.
Hemispherical Solar Distiller Performance Utilizing Hybrid Storage Media, Paraffin Wax with Nanoparticles: An Experimental Study
Authors: Sathyamurthy Ravishankar , El-Maghlany Wael M. , Attia Mohammed El Hadi , Kabeel A. E. , Abdelgaied Mohamed , M. Abdel-Aziz Moataz , Abdullah A. S. , Vasanthaseelan S.
Published: December 2022

The traditional method of obtaining fresh water for drinking is by burning fossil fuels, emitting greenhouse gases into the atmosphere. However, renewable energy is gaining more traction since it is available free of cost for producing fresh water. In this study, Al2O3 nanoparticles were distributed in a phase change material (paraffin wax) that had been fixed at a hemispherical distiller water basin. Three scenarios with three hemispherical distillers were examined. A conventional hemispherical distiller (CHD), a conventional hemispherical distiller with paraffin wax as a phase change material (CHD-PCM), and a conventional hemispherical distiller with PCM partially filled with Al2O3 nanoparticles (CHD-N-PCM) were tested under the same climatic conditions. The experimental results showed that CHD gave a daily yield of 4.85 L/m2/day, while CHD-PCM increased the yield to up to 6.2 L/m2/day with a 27.84% daily yield enhancement. The addition of Al2O3 nanoparticles to paraffin wax CHD-N-PCM improved hemispherical distillate yield up to 8.3 L/m2/day with a 71.13% increase over CHD yield.
Comparative Investigation of Chemical Constituents of Kernels, Leaves, Husk, and Bark of Juglans regia L., Using HPLC-DAD-ESI-MS/MS Analysis and Evaluation of Their Antioxidant, Antidiabetic, and Anti-Inflammatory Activities
Authors: Bourais Ilhame , Elmarrkechy Salma , Taha Douae , Badaoui Bouabid , Mourabit Yassine , Salhi Najoua , Alshahrani Mohammed Merae , Al Awadh Ahmed Abdullah , Bouyahya Abdelhakim , Goh Khang Wen , Tan Ching Siang , El Hajjaji Souad , Dakka Nadia , Iba Naima
Published: December 2022

Leaves, husk, kernels, and bark methanolic extracts of Juglans regia L. were tested for their in vitro antidiabetic, anti-inflammatory, and antioxidant activities. For these purposes, α-amylase and α-glucosidase were used as the main enzymes to evaluate antidiabetic activities. Moreover, lipoxidase and tyrosinase activities were tested to estimate anti-inflammatory properties. Antioxidant properties of Juglans regia L., extracts were determined using three different assays. Leaves extract has an important radical scavenging activity and a-amylase inhibition. Similarly, husk extracts showed high total phenolic content (306.36 ± 4.74 mg gallic acid equivalent/g dry extract) with an important α-amylase inhibition (IC50 = 75.42 ± 0.99 µg/mL). Kernels exhibit significant tyrosinase (IC50 = 51.38 ± 0.81 µg/mL) correlated with antioxidant activities (p < 0.05). Husk and bark extracts also showed strong anti-lipoxidase activities with IC50 equal to 29.48 ± 0.28 and 28.58 ± 0.35 µg/mL, respectively. HPLC-DAD-ESI-MS/MS analysis highlights the phenolic profile of methanolic extracts of Juglans regia L. plant parts. The identified polyphenols were known for their antioxidant, antidiabetic (dicaffeoyl-quinic acid glycoside in kernels), and anti-inflammatory (3,4-dihydroxybenzoic acid in leaves) activities. Further investigations are needed to determine molecular mechanisms involved in these effects as well as to study the properties of the main identified compounds.