bluuebunny/crossref_metadata_2025 huggingface dataset:
The efficacy and safety of tyrosine kinase 2 inhibitor deucravacitinib in the treatment of plaque psoriasis: a systematic review and meta-analysis of randomized controlled trials
Authors: Qiu Jingyue , Liu Jiakuo , Liu Wenwen , Lin Fei , Shi Ning
Published: September 2023

Background

Orally effective therapeutics for plaque psoriasis with improved response rates, lower toxicity and costs are needed in clinical practices. This study aims to assess the efficacy and safety of the recently approved TYK2 inhibitor deucravacitinib in adults with moderate to severe plaque psoriasis through meta-analysis.

Methods

A systematic search was performed for eligible studies using electronic databases, including PubMed, Embase, Cochrane Library, Clinical Trials, the EU Clinical Trials Register, and the International Clinical Trials Registry Platform (ICTRP). Randomized controlled trials (RCTs) comparing the efficacy and safety of deucravacitinib vs. placebo or active comparators in adult patients with plaque psoriasis were included. The effectiveness of deucravacitinib was evaluated using a 75% improvement in Psoriasis Area and Severity Index (PASI 75) from baseline and the proportion of patients achieving the static Physician’s Global Assessment (sPGA) response. The secondary endpoint was the proportion of patients achieving PASI 90, PASI 100, ssPGA 0/1, and Dermatology Life Quality Index 0/1 (DLQI). The incidence of adverse events (AEs), serious AEs (SAEs), and AE-related treatment discontinuation were statistically analyzed to determine the safety of deucravacitinib.

Results

The systematic review and meta-analysis included five RCTs involving 2,198 patients with moderate to severe plaque psoriasis. Results showed that deucravacitinib was superior to placebo as well as active comparator apremilast in multiple key endpoints, including PASI 75, sPGA 0/1, PASI 90, PASI 100, DLQI 0/1 at week 16. Moreover, a durable response was seen in the two 52-week studies. Safety assessment showed that deucravacitinib was generally well tolerated, and the incidence of AEs, SAEs, and AE-related treatment discontinuation was low and balanced across groups.

Conclusion

Deucravacitinib demonstrated superior efficacy to apremilast in adult patients with moderate to severe plaque psoriasis with an acceptable safety profile and has the potential to be used as the first-line oral therapy for plaque psoriasis.
SW-UNet: a U-Net fusing sliding window transformer block with CNN for segmentation of lung nodules
Authors: Ma Jiajun , Yuan Gang , Guo Chenhua , Gang Xiaoming , Zheng Minting
Published: September 2023

Medical images are information carriers that visually reflect and record the anatomical structure of the human body, and play an important role in clinical diagnosis, teaching and research, etc. Modern medicine has become increasingly inseparable from the intelligent processing of medical images. In recent years, there have been more and more attempts to apply deep learning theory to medical image segmentation tasks, and it is imperative to explore a simple and efficient deep learning algorithm for medical image segmentation. In this paper, we investigate the segmentation of lung nodule images. We address the above-mentioned problems of medical image segmentation algorithms and conduct research on medical image fusion algorithms based on a hybrid channel-space attention mechanism and medical image segmentation algorithms with a hybrid architecture of Convolutional Neural Networks (CNN) and Visual Transformer. To the problem that medical image segmentation algorithms are difficult to capture long-range feature dependencies, this paper proposes a medical image segmentation model SW-UNet based on a hybrid CNN and Vision Transformer (ViT) framework. Self-attention mechanism and sliding window design of Visual Transformer are used to capture global feature associations and break the perceptual field limitation of convolutional operations due to inductive bias. At the same time, a widened self-attentive vector is used to streamline the number of modules and compress the model size so as to fit the characteristics of a small amount of medical data, which makes the model easy to be overfitted. Experiments on the LUNA16 lung nodule image dataset validate the algorithm and show that the proposed network can achieve efficient medical image segmentation on a lightweight scale. In addition, to validate the migratability of the model, we performed additional validation on other tumor datasets with desirable results. Our research addresses the crucial need for improved medical image segmentation algorithms. By introducing the SW-UNet model, which combines CNN and ViT, we successfully capture long-range feature dependencies and break the perceptual field limitations of traditional convolutional operations. This approach not only enhances the efficiency of medical image segmentation but also maintains model scalability and adaptability to small medical datasets. The positive outcomes on various tumor datasets emphasize the potential migratability and broad applicability of our proposed model in the field of medical image analysis.
Probiotic properties of Bacillus subtilis DG101 isolated from the traditional Japanese fermented food nattō
Authors: Leñini Cecilia , Rodriguez Ayala Facundo , Goñi Anibal Juan , Rateni Liliana , Nakamura Akira , Grau Roberto Ricardo
Published: September 2023

Spore-forming probiotic bacteria offer interesting properties as they have an intrinsic high stability, and when consumed, they are able to survive the adverse conditions encountered during the transit thorough the host gastrointestinal (GI) tract. A traditional healthy food, nattō, exists in Japan consisting of soy fermented by the spore-forming bacterium Bacillus subtilis natto. The consumption of nattō is linked to many beneficial health effects, including the prevention of high blood pressure, osteoporosis, and cardiovascular-associated disease. We hypothesize that the bacterium B. subtilis natto plays a key role in the beneficial effects of nattō for humans. Here, we present the isolation of B. subtilis DG101 from nattō and its characterization as a novel spore-forming probiotic strain for human consumption. B. subtilis DG101 was non-hemolytic and showed high tolerance to lysozyme, low pH, bile salts, and a strong adherence ability to extracellular matrix proteins (i.e., fibronectin and collagen), demonstrating its potential application for competitive exclusion of pathogens. B. subtilis DG101 forms robust liquid and solid biofilms and expresses several extracellular enzymes with activity against food diet-associated macromolecules (i.e., proteins, lipids, and polysaccharides) that would be important to improve food diet digestion by the host. B. subtilis DG101 was able to grow in the presence of toxic metals (i.e., chromium, cadmium, and arsenic) and decreased their bioavailability, a feature that points to this probiotic as an interesting agent for bioremediation in cases of food and water poisoning with metals. In addition, B. subtilis DG101 was sensitive to antibiotics commonly used to treat infections in medical settings, and at the same time, it showed a potent antimicrobial effect against pathogenic bacteria and fungi. In mammalians (i.e., rats), B. subtilis DG101 colonized the GI tract, and improved the lipid and protein serum homeostasis of animals fed on the base of a normal- or a deficient-diet regime (dietary restriction). In the animal model for longevity studies, Caenorhabditis elegans, B. subtilis DG101 significantly increased the animal lifespan and prevented its age-related behavioral decay. Overall, these results demonstrate that B. subtilis DG101 is the key component of nattō with interesting probiotic properties to improve and protect human health.
A three-component Breakfast Quality Score (BQS) to evaluate the nutrient density of breakfast meals
Authors: Poinsot Romane , Maillot Matthieu , Masset Gabriel , Drewnowski Adam
Published: September 2023

Background

Nutrient profiling methods can be applied to individual foods or to composite meals. This article introduces a new method to assess the nutrient density of breakfast meals.

Objective

This study aimed to develop a new breakfast quality score (BQS), based on the nutrient standards previously published by the International Breakfast Research Initiative (IBRI) consortium.

Methods

BQS was composed of three sub-scores derived from the weighted arithmetic mean of corresponding nutrient adequacy: an eLIMf sub-score (energy, saturated fat, free sugars, and sodium), a PF (protein and fiber) sub-score, and a VMn1 − 14 micronutrient sub-score, where n varied from 0 to 14. The effects of assigning different weights to the eLIMf, PF, and VMn were explored in four alternative models. The micronutrients were calcium, iron, potassium, magnesium, zinc, vitamin A, thiamin, riboflavin, niacin, vitamin B5, vitamin B6, vitamin B12, vitamin C, and vitamin D. Micronutrient permutations were used to develop alternate VMn1 − 14 sub-scores. The breakfast database used in this study came from all breakfasts declared as consumed by adults (>18 years old) in the French dietary survey INCA3. All models were tested with respect to the Nutrient Rich Food Index (NRF9.3). BQS sensitivity was tested using three prototype French breakfasts, for which improvements were made.

Results

The correlations of the models with NRF9.3 improved when the VMn>3 sub-score (n > 3) was included alongside the PF and eLIMf sub-scores. The model with (PF+VMn) and eLIMf each accounting for 50% of the total score showed the highest correlations with NRF9.3 and was the preferred final score (i.e., BQS). BQS was sensitive to the changing quality of three prototype breakfasts defined as tartine, sandwich, and cereal.

Conclusion

The proposed BQS was shown to valuably rank the nutritional density of breakfast meals against a set of nutrient recommendations. It includes nutrients to limit along with protein, fiber, and a variable number of micronutrients to encourage. The flexible VMn sub-score allows for the evaluation of breakfast quality even when nutrient composition data are limited.
Multi-classification method of arrhythmia based on multi-scale residual neural network and multi-channel data fusion
Authors: Zhang Fuchun , Li Meng , Song Li , Wu Liang , Wang Baiyang
Published: September 2023

Since ECG contains key characteristic information of arrhythmias, extracting this information is crucial for identifying arrhythmias. Based on this, in order to effectively extract ECG data features and realize automatic detection of arrhythmia, a multi-classification method of arrhythmia based on multi-scale residual neural network and multi-channel data fusion is proposed. First, the features of single-lead ECG signals are extracted and converted into two-dimensional images, and the feature data sets are labeled and divided according to different types of arrhythmias. The improved residual neural network is trained on the training set to obtain the classification model of the neural network. Finally, the classification model is applied to the automatic detection of arrhythmias during exercise. The accuracy of the classification model of this method is as high as 99.60%, and it has high accuracy and generalization ability. The automatic identification of arrhythmia also contributes to the research and development of future wearable devices.
Beat cues facilitate time estimation at longer intervals
Authors: Torres Nathércia L. , Castro São Luís , Silva Susana
Published: September 2023

Introduction

Time perception in humans can be relative (beat-based) or absolute (duration-based). Although the classic view in the field points to different neural substrates underlying beat-based vs. duration-based mechanisms, recent neuroimaging evidence provided support to a unified model wherein these two systems overlap. In line with this, previous research demonstrated that internalized beat cues benefit motor reproduction of longer intervals (> 5.5 s) by reducing underestimation, but little is known about this effect on pure perceptual tasks. The present study was designed to investigate whether and how interval estimation is modulated by available beat cues.

Methods

To that end, we asked 155 participants to estimate auditory intervals ranging from 500 ms to 10 s, while manipulating the presence of cues before the interval, as well as the reinforcement of these cues by beat-related interference within the interval (vs. beat-unrelated and no interference).

Results

Beat cues aided time estimation depending on interval duration: for intervals longer than 5 s, estimation was better in the cue than in the no-cue condition. Specifically, the levels of underestimation decreased in the presence of cues, indicating that beat cues had a facilitating effect on time perception very similar to the one observed previously for time production.

Discussion

Interference had no effects, suggesting that this manipulation was not effective. Our findings are consistent with the idea of cooperation between beat- and duration-based systems and suggest that this cooperation is quite similar across production and perception.
Eating disorders, primary care, and stigma: an analysis of research trends and patterns
Authors: Kurdak Hatice , Tiyekli Erkan , Özcan Sevgi , Özer Zeliha Yelda , Nur Topuz Ayşe
Published: September 2023

Eating disorders (EDs) are a growing concern affecting millions worldwide. Early detection and treatment are crucial, but stigma can prevent people from seeking help. Primary care providers can play a critical role in early detection by coordinating care with other professionals. Understanding the research landscape on EDs, primary care, and stigma is essential for identifying knowledge gaps to direct future research and improve management. In this study, we aimed to analyze the scientific trends and patterns in research about EDs, primary care, and stigma. A bibliometric analysis was conducted using the Web of Science database to collect articles published between May 1986 and May 2023. Bibliometric indicators were utilized to examine authorship, collaboration patterns, and influential papers. Topic analysis was performed to identify stigma-related terms within the dataset. A total of 541 research articles were analyzed, and it was found that the average number of publications per year has increased linearly from nearly zero in 1986 to 41 in 2022. One of the study’s main findings is that despite this linear increase over the years, the subject of stigma did not take a prominent place in the literature. Only a few stigma concepts could be identified with the topic analysis. The authors in the field are also interested in; screening, neurotic symptoms, training, adolescent, obesity-related conditions, and family. One-third of all publications were from 15 journals. However, only two of them were primary healthcare journals. Leading authors’ collaborations were another critical finding from the network analysis. This may help to expand primary care related EDs research to end the mental health stigma. This study provides insights into the research trends and patterns regarding eating disorders, primary care, and stigma. Our findings highlight the need to address primary care’s impact and stigma on EDs. The identified research gaps can guide future studies to improve the prevention, diagnosis, and treatment of eating disorders in primary care settings.
A protocol of Chinese expert consensuses for the management of health risk in the general public
Authors: Wang Danni , He Qiangsheng , Xia Bin , Zheng Jie , Cao Wangnan , Su Shaochen , Hu Fulan , Li Jiang , Zhang Yuelun , Ren Zhengjia , Li Xue , Wu Xinyin , Huang Yafang , Tang Yongjiang , Wei Fuxin , Zou Huachun , Jiang Huaili , Huang Junjie , Meng Wenbo , Bai Ming , Yang Kehu , Yuan Jinqiu ,   on behalf of the Chinese Health RIsk MAnagement Collaboration (CHRIMAC)
Published: September 2023

Introduction

Non-communicable diseases (NCDs) represent the leading cause of mortality and disability worldwide. Robust evidence has demonstrated that modifiable lifestyle factors such as unhealthy diet, smoking, alcohol consumption and physical inactivity are the primary causes of NCDs. Although a series of guidelines for the management of NCDs have been published in China, these guidelines mainly focus on clinical practice targeting clinicians rather than the general population, and the evidence for NCD prevention based on modifiable lifestyle factors has been disorganized. Therefore, comprehensive and evidence-based guidance for the risk management of major NCDs for the general Chinese population is urgently needed. To achieve this overarching aim, we plan to develop a series of expert consensuses covering 15 major NCDs on health risk management for the general Chinese population. The objectives of these consensuses are (1) to identify and recommend suitable risk assessment methods for the Chinese population; and (2) to make recommendations for the prevention of major NCDs by integrating the current best evidence and experts’ opinions.

Methods and analysis

For each expert consensus, we will establish a consensus working group comprising 40–50 members. Consensus questions will be formulated by integrating literature reviews, expert opinions, and an online survey. Systematic reviews will be considered as the primary evidence sources. We will conduct new systematic reviews if there are no eligible systematic reviews, the methodological quality is low, or the existing systematic reviews have been published for more than 3 years. We will evaluate the quality of evidence and make recommendations according to the GRADE approach. The consensuses will be reported according to the Reporting Items for Practice Guidelines in Healthcare (RIGHT).
Case report: Clitoral adenocarcinoma in a mixed-breed female dog
Authors: Moss Christina , Sugai Nicole , Persons Rebecca , Ciepluch Brittany , Lahmers Kevin , Cecere Julie
Published: September 2023

A 9-year-old, spayed female, mixed-breed dog was initially presented for evaluation of chronic dermatitis on the nasal planum, where a clitoral mass was discovered as an incidental finding during the exam. No further investigation of the clitoral mass was undertaken due to other significant dermal lesions and the lack of clinical significance of the mass at the time. However, ~1 month later, the dog was presented to the Emergency Service for bleeding from the vulva. The clitoral mass was found to have prolapsed; the mass was manually reduced back into a position within the vulvar folds and maintained with a purse-string suture. The dog was referred to the Theriogenology Service for further investigation and removal. On follow-up evaluation, the mass was noted to be multi-lobulated, ulcerated, cystic, and involving the clitoris but not the urethra. The urethra was easily catheterized, and no urinary abnormalities were found. No evidence of lymph node metastasis or hypercalcemia was noted prior to surgery. Ultrasonographic evaluation of the anal sacs was normal. The mass was removed, and histopathologic evaluation revealed a primary clitoral adenocarcinoma. On recheck evaluation, after 1 month, no evidence of metastasis or local recurrence was observed. Clitoral adenocarcinoma is a rarely reported neoplasm of the canine genital tract that shares many clinical, histopathological, and immunohistochemical features with canine apocrine gland anal sac adenocarcinoma. This case adds to the available knowledge on the condition, specifically regarding the frequency of complications such as hypercalcemia and metastasis, as previous reports suggest that these are present at least 50% of the time.
Efficient Method for Heat Flux Calculations within Multidisciplinary Analyses of Hypersonic Vehicles
Authors: Jung Jongho , Yee Kwanjung , Jeong Shinkyu
Published: September 2023

A large amount of heat flux from aerodynamic heating acts on reusable spacecraft; thus, an accurate heat flux prediction around spacecraft reentry is essential for developing a high-performance reusable spacecraft. Although the approximate convective-heating equations can calculate the heat flux with high efficiency and sufficient fidelity, the heat flux should be evaluated over a thousand times for the entire trajectory in multidisciplinary analyses. For these reasons, it is necessary to develop an efficient method for calculating the heat flux for multidisciplinary analysis. In this paper, an efficient method for heat flux calculation that is adoptable by multidisciplinary analyses for hypersonic vehicles, such as spacecraft, is developed. Approximate convective-heating equations were adopted to relieve the computational cost of estimating the heat flux, and an adaptive time step method for heat flux calculations was developed to reduce the number of heat flux calculations required across the entire flight trajectory. A dynamic factor was introduced that adjusts the time step between each instance of the heat flux calculation. Since the time step using this factor could increase under low heat flux conditions, the number of heat flux calculations decreases by approximately one-tenth with over 90% accuracy. Therefore, the efficiency was improved with high accuracy using the adaptively-determined time step according to this dynamic factor.
Influence of Propeller Parameters on the Aerodynamic Performance of Shrouded Coaxial Dual Rotors in Hover
Authors: Zhang Hangwen , Li Bochen , Li Boyang , Yang Cheng
Published: September 2023

A numerical method is used to evaluate the influence of propeller parameters on the aerodynamic performance of shrouded coaxial dual rotors in hover. Compared with the open-rotor configuration, the shrouded rotors reduce the tip vortex, resulting in a higher thrust and figure of merit (FoM). The varying inflow distribution over the inlet lip of the shroud introduces a different working condition for the propellers, thereby providing an opportunity for propeller parameter optimization. The pitch length, chord length, and tip clearance are chosen as the design parameters to improve the aerodynamic performance of the rotors. When the pitch lengths of the upper and lower propellers increase, the shrouded rotors outperform the original ones in both the coefficient of thrust (Ct) and in terms of the (FoM). The results show that increasing the chord length improves the Ct but that the (FoM) is almost unaffected. Moreover, smaller tip clearance can significantly improve the aerodynamic performance of the shrouded rotors. Results presented in this work provide insights into the parametric design and optimization of shrouded rotors.
Implementation of a Circular Bioeconomy: Obtaining Cellulose Fibers Derived from Portuguese Vine Pruning Residues for Heritage Conservation, Oxidized with TEMPO and Ultrasonic Treatment
Authors: Araújo Liliana , Machado Adriana R. , Sousa Sérgio , Ramos Óscar L. , Ribeiro Alessandra B. , Casanova Francisca , Pintado Manuela E. , Vieira Eduarda , Moreira Patrícia
Published: September 2023

Inspired by the principles of the circular economy, using vineyard pruning residues as a source of raw materials for producing nanocellulose is a promising approach to transforming vineyard resources into value-added products. This study aimed to obtain and characterize cellulose and cellulose nanofibers from such sources. The cellulose collected from different fractions of micronized stems (500, 300, 150 μm, and retain) of vines was submitted to autohydrolysis and finally bleached. Soon, it underwent treatment via (2,2,6,6-tetrametil-piperidi-1-nil)oxil (TEMPO) oxidation and ultrasonic to obtain nanocellulose fibers. The cellulose films were obtained at a microscale thickness of 0.05 ± 0.00; 0.37 ± 0.03; 0.06 ± 0.01 e 0.030 ± 0.01 mm, with the following particle size: 500 µm, 300 µm, 150 µm, and retain (<150 µm). The bleaching efficiency of the cellulose fibers of each particle size fraction was evaluated for color through a colorimeter. In addition, the extraction of cellulose fibers was assessed by infrared with Fourier transform, and size and shape were assessed by microscopy. Differential scanning calorimetry and X-ray diffraction were performed to confirm the thermal and crystalline properties. Combining autohydrolysis with a bleaching step proved to be a promising and ecological alternative to obtain white fractions rich in cellulose. It was possible to perform the extraction of cellulose to obtain nanocellulose fibers from vine pruning residues for the development of coatings for the conservation of heritage buildings from environmental conditions through an environmentally friendly process.
Effect of Different Mulching Practices on Bacterial Community Composition and Fruit Quality in a Citrus Orchard
Authors: Yang Lei , Wang Min , Li Shuang , Yu Jianjun , Chen Yang , Yang Haijian , Wang Wu , Chen Hao , Hong Lin
Published: September 2023

Citrus fruit, the most abundant global fruit, is primarily concentrated in China. Mulching techniques have demonstrated a favorable effect on the soil’s hydrothermal environment, resulting in enhanced plant growth, yield, and quality. Nevertheless, the impact of mulching on the soil microbiome and fruit quality of Beni Madonna tangor (Citrus nanko × C. amakusa) remains unknown. This study aimed to examine the impact of different mulching techniques, namely traditional flat planting (CK), reflective film mulching (RM), black film mulching (BM), corn stalk mulching (CS), green film mulching (GM), and transparent plastic film mulching (TM), on the bacterial diversity, composition, cooccurrence networks, and bulk soil assembly during the ripening stage of Beni Madonna tangor. The various treatments employed in this study exhibited distinct impacts on fruit quality and soil temperature and humidity. Through comprehensively evaluating fruit quality and soil properties, it was found that RM treatment had the best effect, while CK treatment was the worst. The mulching results in a significant decrease in the Shannon indexcompared to the control group. Specifically, mulching with RM, CS, and GM led to a significant increase in Chloroflexi abundance (p < 0.05). Furthermore, the interaction complexity between bacteria was found to be lower under GM and TM treatments compared to the other mulching treatments. At the genus level, Chloroflexi exhibited a positive correlation with total soluble solid (TSS) and Vitamin C (Vc) contents, however, GP13 showed a converse result. It was determined that Chloroflexi, with a high abundance of RM, promoted an improvement in soil and fruit quality. Ultimately, it can be concluded that various mulching techniques yield distinct impacts on both the soil bacterial composition and citrus quality, with these effects being intricately linked to the core biota’s functionalities within each treatment.
Effect of Water-Fertilizer Coupling on the Growth and Physiological Characteristics of Young Apple Trees
Authors: Zhou Hanmi , Ma Linshuang , Zhang Shuo , Zhao Long , Niu Xiaoli , Qin Long , Xiang Youzhen , Guo Jinjin , Wu Qi
Published: September 2023

China has the largest apple-growing area and fresh fruit production in the world; however, water shortages and low fertilizer utilization rates have restricted agricultural development. It is a major challenge to obtain scientific and reasonable irrigation and fertilization systems for young apple trees in semi-arid regions of northern China. A 2-year field bucket experiment with four irrigation levels of W1 (75–90% Fs, where Fs is the field water holding capacity), W2 (65–80% Fs), W3 (55–70% Fs), and W4 (45–60% Fs), and three fertilizer levels of F1 (27-9-9 g N-P2O5-K2O), F2 (18-9-9 g N-P2O5-K2O), and F3 (9-9-9 g N-P2O5-K2O) was conducted in 2019 and 2020, so as to explore the effects of different water and fertilizer treatments on the growth and physiological characteristics of young apple trees. The results showed that the plant growth, leaf area, and dry matter of young apple trees at each growing period reached maximum values under F1W2, and they showed a positive linear relationship with relative chlorophyll content (SPAD), net photosynthetic rate (Pn), transpiration rate (Tr), stomatal conductance (Gs), water consumption, and water use efficiency (WUE). With the growth of young apple trees, water-fertilizer coupling could significantly increase the leaf SPAD of young apple trees. Pn, Tr, and Gs reached the maximum value under F1W1, and although they decreased under F1W2, the water use efficiency increased by 2.3–25.7% and 4.0–23.8% under F1W2 compared with other treatments in two years, respectively. The water consumption of young apple trees increased with the increase of irrigation and fertilizer, and both dry matter and water productivity reached the maximum value under F1W2, which increased by 0.8%, 14.6% in 2019, and 0.6%, 11.1% in 2020 compared with F1W1, while water consumption decreased by 12.2% and 9.4% in both years. In conclusion, F1W2 treatment (soil moisture was controlled at 65–80% of field water holding capacity, and N-P2O5-K2O was controlled at 27-9-9 g) was the best coupling mode of water and fertilizer for young apple trees in semi-arid areas of northern China.
The Effect of Biofumigation on the Microbiome Composition in Replanted Soil in a Fruit Tree Nursery
Authors: Wieczorek Robert , Zydlik Zofia , Wolna-Maruwka Agnieszka , Niewiadomska Alicja , Kayzer Dariusz
Published: September 2023

The imbalance of the soil microbiome is a primary indicator of ARD (apple replant disease). Biofumigation is a treatment that enables the restoration of microbiome balance. This study involved an analysis of the taxonomic and functional diversity of bacterial communities in replanted soil (ARD), in replanted soils with forecrops of French marigold (Tagetes patula L.), white mustard (Sinapis alba), and oilseed radish (Raphanus sativus var. oleifera), and in agricultural soil. The biofumigation treatment with phytosanitary plants changed the structure and abundance of the replanted soil microbiome in a fruit tree nursery. The count of operational taxonomic units (OTU) of the Proteobacteria, Bacteroidota, Patescibacteria, Chloroflexi, and Verrucomicrobiota phyla increased, whereas the count of the Firmicutes, Acidobacteriota, and Actinobacteriota phyla decreased. Biofumigation caused an increase in the content of some dominant bacterial genera, such as Flavobacterium, Massila, Sphingomonas, Arenimonas, and Devosia, in the replanted soil. Their presence in the soil may improve the growth of plants, induce their systemic resistance, and thus improve the production properties of soil with ARD. The research results led to the conclusion that the use of phytosanitary plants in nursery production can be an effective alternative to the chemical fumigation of soil.
Effects of Sodium Selenite on the Rhizosphere Environment, Growth, and Physiological Traits of Oilseed Rape (Brassica napus L.)
Authors: Xu Yuefeng , Li Yonghua
Published: September 2023

Soil selenium (Se) speciation characteristics and their influence on the Se enrichment pattern and physiological characteristics of oilseed rape are poorly understood. We investigated dynamic changes in rhizosphere soil physicochemical properties, Se uptake and partitioning, biomass, and physiological indices in oilseed rape under five exogenous Se condition levels (0, 1.0, 2.5, 5.0, and 10.0 mg kg−1 Se in sodium selenite) using soil cultivation experiments. The rhizosphere pH and dissolved organic carbon in the soil solution were higher than those of the non-rhizosphere soil solution. The total Se, water-soluble Se, exchangeable Se, and organic Se contents in soils, as well as rapeseed root/leaf Se contents, significantly increased with increasing exogenous Se. Under 2.5 mg kg−1 Se, the biomass of rapeseed roots and leaves increased at the sixth week (82% and 58%) and eighth week (48% and 32%), respectively, reaching the highest level. Applications of 5.0 mg kg−1 Se at 6 and 8 weeks significantly increased the glutathione peroxidase activity (49%/82%), and decreased malondialdehyde content (23%/39%). Canonical correlation and ridge regression analyses showed that Se in the rapeseed roots/leaves significantly and positively correlated with water-soluble Se, exchangeable Se, and organic Se in rhizosphere soil. Overall, moderate-concentration Se soil application benefited oilseed rape growth (optimum = 2.5 mg kg−1 Se). Our findings reveal the response of oilseed rape to soil Se application based on plant growth and physiological traits, rhizospheric soil solution properties, and Se speciation transformation.
Fine-Root C:N:P Stoichiometry and Its Driving Factors Are Different between Arbuscular and Ectomycorrhizal Plants in China
Authors: Jing Manman , Shi Zhaoyong , Gao Xushuo , Gao Jiakai , Wu Shanwei , Xu Xiaofeng , Xu Shouxiao
Published: September 2023

Fine roots are essential for terrestrial biogeochemical cycles. Mycorrhizal fungi’s functions in regulating the uptake of carbon (C), nitrogen (N), and phosphorus (P) in plants are increasingly being recognized. However, the influence of mycorrhizae on Chinese plants’ fine-root stoichiometry has not been considered. Herein, 772 plants with identified mycorrhizal types were divided into arbuscular mycorrhizal (AM) and ectomycorrhizal (ECM) types to investigate the differences in their fine-root stoichiometry and their driving factors. The results showed that the AM and ECM fine-root stoichiometries were significantly different (p < 0.001; p < 0.05). The AM plants’ fine-root stoichiometry was mainly affected by the soil environment (8.76–90.12%), while ECM plants were more sensitive to climatic factors (23.51–52.41%). Further analysis showed that the mean annual temperature (MAT) was significantly correlated with AM plants’ fine-root C and P and ECM plants’ fine-root N and P. Mean annual precipitation (MAP) was significantly correlated with all AM plants’ fine-root elements (p < 0.01) but was only negatively correlated with ECM fine-root P. It was concluded that the mycorrhizal type affects the response of the fine-root stoichiometry to climate and soil variations. Therefore, the mycorrhizal effect deserves attention when studying the relationship between plant nutrient uptake and environmental changes.
A Review of Plastic Film Mulching on Water, Heat, Nitrogen Balance, and Crop Growth in Farmland in China
Authors: Zhao Yin , Mao Xiaomin , Li Sien , Huang Xi , Che Jiangang , Ma Changjian
Published: September 2023

Plastic film mulching has been widely used to improve crop yield and water use efficiency, although the effects of plastic film mulching on water, heat, nitrogen dynamics, and crop growth are rarely presented comprehensively. This study investigated a large number of studies in film mulching fields from the past 10 years (mostly from 2019 to 2023) and summarized the impact of plastic film mulching, progress in modeling with film mulching, and future research directions. The effects of plastic film mulching were intricate and were influenced by film mulching methods, irrigation systems, crop types, crop growth stages, etc. Overall, plastic film mulching showed a positive effect on improving soil water, temperature, and nitrogen status, enhancing crop transpiration and photosynthetic rates, and promoting crop growth and yield, although film mulching may have negative effects, such as increasing rainfall interception, blocking water entering the soil, and reducing net radiation income. The crop yield and water use efficiency could increase by 39.9–84.7% and 45.3–106.4% under various film mulching methods. Coupled models of soil water and heat transport and crop growth under plastic film mulching conditions have been established by considering the effects of plastic film mulching on the upper boundary conditions of soil water and heat, energy budget and distribution processes, and the exchange of latent and sensible heat between soil and atmosphere. The models have good applicability in film mulched farmland of maize, rice, and potato for different regions of China. Further development is needed for soil water, heat, nitrogen migration, and crop growth models under different plastic film mulching methods, and the acquisition of soil and crop indicators under plastic film mulching conditions based on big data support. The study will provide reference for the subsequent development and innovation of plastic film mulching technology.
The Effect of Bioclimatic Covariates on Ensemble Machine Learning Prediction of Total Soil Carbon in the Pannonian Biogeoregion
Authors: Radočaj Dorijan , Jurišić Mladen , Tadić Vjekoslav
Published: September 2023

This study employed an ensemble machine learning approach to evaluate the effect of bioclimatic covariates on the prediction accuracy of soil total carbon (TC) in the Pannonian biogeoregion. The analysis involved two main segments: (1) evaluation of base environmental covariates, including surface reflectance, phenology, and derived covariates, compared to the addition of bioclimatic covariates; and (2) assessment of three individual machine learning methods, including random forest (RF), extreme gradient boosting (XGB), and support vector machine (SVM), as well as their ensemble for soil TC prediction. Among the evaluated machine learning methods, the ensemble approach resulted in the highest prediction accuracy overall, outperforming the individual models. The ensemble method with bioclimatic covariates achieved an R2 of 0.580 and an RMSE of 10.392, demonstrating its effectiveness in capturing complex relationships among environmental covariates. The results of this study suggest that the ensemble model consistently outperforms individual machine learning methods (RF, XGB, and SVM), and adding bioclimatic covariates improves the predictive performance of all methods. The study highlights the importance of integrating bioclimatic covariates when modeling environmental covariates and demonstrates the benefits of ensemble machine learning for the geospatial prediction of soil TC.
Systematic Review of Technology in Aeroponics: Introducing the Technology Adoption and Integration in Sustainable Agriculture Model
Authors: Garzón Juan , Montes Luis , Garzón Jorge , Lampropoulos Georgios
Published: September 2023

Aeroponics is a soilless agricultural technique that grows plants by misting their roots with a nutrient-rich solution. Technology has transformed aeroponics by providing it with benefits such as the control of environmental factors, automated nutrient delivery, and the monitoring of plant health. This paper presents a systematic review of 47 studies to identify the status and tendencies in the usage of technology in aeroponics as well as the main opportunities and challenges. Furthermore, this paper introduces the Technology Adoption and Integration in Sustainable Agriculture (TAISA) model. TAISA is a model that identifies the degree of technology integration in any sustainable agriculture system to determine how technology affects production and quality. The systematic review indicates that the most common technology in aeroponics is sensing technology and Industry 4.0. These technologies have brought multiple benefits such as sustainability and time efficiency. Conversely, the studies highlighted technical complexity and power dependency as the main challenges in technology-assisted aeroponics. Finally, the TAISA model reveals that technology has primarily been employed in creating new processes that are only possible to implement with the help of technology. Therefore, we conclude that technology use has taken root in aeroponics and can be promoted to improve sustainable agriculture.
Evaluation of Soil Fertility Quality under Biochar Combined with Nitrogen in an Irrigated Wheat Field in Northern Xinjiang, China
Authors: Yang Weijun , Wang Zilong , Guo Song , Yang Mei , Zhao Lining , Zhao Hongmei , Jia Hongtao , Xu Wanli
Published: September 2023

A randomized block field experiment was conducted in the irrigated area of northern Xinjiang, China, to clarify the effects of biochar (0, 30 × 103 kg·hm−2 (B)) combined with nitrogen (0, 150 (N1), and 300 kg·hm−2 (N2)) on soil fertility, which was represented by CK, B, N1, N2, BN1, and BN2, respectively. The performance of eleven indices related to soil chemical, physical, and biological properties was evaluated by factor analysis and cluster analysis to determine the most appropriate mode for soil fertilization and to identify the main soil environmental factors affecting wheat yield under biochar combined with nitrogen. The results indicated that the first factor was the activity factor, including the Shannon index, McIntosh index, and Simpson index. The second factor was the available nutrient factor, including organic matter, available phosphorus, and available potassium. Factor 3 can be taken as the nutrient-supplying and retaining factor containing total phosphorus, total potassium, and bacterial quantity. The highest score of soil quality was observed in the BN1 treatment, followed by the BN2 and B treatments, which were almost in line with the results of wheat yields. Cluster analysis classified six treatments into four main groups on the basis of the measured parameters, which was mostly consistent with the results of soil quality scores. Considering both economic and environmental benefits, 30 × 103 kg·hm−2 biochar combined with 150 kg·hm−2 nitrogen was the best combination to restore crop productivity and soil quality and to achieve nitrogen decrease and benefit increase. This study provided the scientific basis for the rational fertilization and scientific management of biochar combined with nitrogen fertilizer in the irrigated area of northern Xinjiang, China.
Sugar Beet Rooting Pattern Mediates Stomatal and Transpiration Responses to Progressive Water Stress
Authors: Bodner Gernot , Alsalem Mouhannad
Published: September 2023

Water stress is the main risk facing sugar beet production in Europe and is expected to worsen with climate change. Therefore, future production essentially depends on the traits that sustain growth during water shortages. In this study, we investigated the interplay of stomatal conductance and transpiration rate as well as the root characteristics of six sugar beet cultivars in a climate chamber experiment under environmental conditions progressing from a non-stressed initial state toward high atmospheric water demand, followed by reduced soil water supply and then by a combination of high demand and low supply. Stomatal conductance quickly responded to changing conditions, dropping from 406.4 to 42.5 mmol m−2 s−1, one order of magnitude, with the transition to reduced soil water availability. The transpiration rate showed a slightly delayed response compared with stomatal conductance, while we observed an inverse influence on the subsequent stomatal behavior exerted by the depletion/conservation of available soil water. The rooting pattern substantially differed among genotypes, predominantly at depths between 60 and 80 cm, where 50.5% of the root length was allocated. Longer roots buffered the effects of the reduction in stomatal conductance at the onset of water supply limitation, with 5.4 mmol m−2 s−1 higher conductance per 100 cm of root length. Therefore, breeding and/or management measures targeting root system vigor are the key to the growth maintenance of sugar beet during dry periods.
Soil Aggregation and Associated Organic Carbon and Total Nitrogen in a Sandy Loam Soil under Long-Term Tillage Effects
Authors: Mechri Mouna , Bouajila Khedija , Ziadi Noura , Raza Taqi , Beltayef Hayet , Eash Neal S. , Jedidi Naceur , Gharbi Azaiez , Hashem Abeer , Abd_Allah Elsayed Fathi
Published: September 2023

In Tunisia, climate change impacts that lead to the degradation of soil resources are considered to be a major limiting factor on socio-economic development. These impacts are exacerbated by the intensive plowing and cultivation practices used by Tunisian farmers, which expedite the depletion of soil organic matter (SOM), leading to changes in the physio-chemical properties of soil and consequently promoting soil erosion. In fact, the decrease in soil organic carbon (SOC) stocks affects soil’s fertility and the ability to regulate climate change. The objective of this study, which was conducted in Le Krib in the Siliana region of northwestern Tunisia, was to evaluate the effects of two cropping systems, consisting of durum wheat (Triticum aestivum) and oats (Avena sativa), and two types of tillage, no-till (NT) and mouldboard plowing (MP), on different soil aggregate classes (>2000 µm, 2000–250 µm, 250–180 µm, 180–53 µm and <53 µm) and soil physio-chemical properties, as well as the resulting effects on the carbon and nitrogen concentrations in these aggregates. The results showed that the carbon content of all soil aggregate classes was influenced by interactions between the previous crop and tillage regime. The clay-silt fraction had higher carbon concentrations under no-till and mouldboard plowing management. Furthermore, the previous crop and tillage type and their interactions had significant effects on nitrogen concentrations in micro-aggregates. The highest nitrogen concentrations (2846.6 ppm) were found in micro-aggregates in soils where the previous crop was durum wheat and mouldboard plowing was used, while the lowest concentrations (1297 ppm) were obtained in soils where the previous crop was oats and mouldboard plowing was used.
Response of Tagetes patula L. and Ageratum houstonianum Mill. to Microbial Biostimulant Inoculation and Organic Fertilization
Authors: Miceli Alessandro , Moncada Alessandra , Vetrano Filippo , Esposito Alessandro
Published: September 2023

A correct cultivation technique supported by scientific evidence that leads to high-quality standards can promote sustainable floriculture. It is urgent to find alternative solutions to the widely used chemical fertilizers and evaluate the effectiveness of other fertilizers. The liquid organic ones, already in use in organic vegetable farming, could be a good substitute if supplied together with growth-promoting products such as microbial biostimulants. In the hope of replacing the traditional chemicals with a more sustainable organic-based fertilization, the present investigation aimed to evaluate the effects of a microbial biostimulant and various combinations of organic and mineral fertilization on morphological characteristics and physiological parameters of Tagetes patula L. and Ageratum houstonianum Mill. The plants were grown in pots with a substrate inoculated or not with the microbial biostimulant and were fertigated with nutrient solutions at different concentrations of elements from mineral and/or organic sources. Six fertilization formulas were adopted: control (only water without fertilizer), 100% mineral fertilization, 50% mineral fertilization, 100% organic fertilization, 50% organic fertilization, and 50% mineral + 50% organic fertilization. For the organic fertilization, a commercial liquid fertilizer admitted in organic farming with 3-2-5.5 NPK with 3% organic nitrogen was used. Mineral fertilization was formulated to match the organic solution as closely as possible. We observed an improvement in ornamental value (stem diameter and shoot number) with the biostimulant inoculum. Generally, the 50% mineral and 50% organic fertilization did not negatively influence the morphological characteristics. The reduction by 50% in the mineral nutrients and the integration of this reduction with an organic fertilizer was feasible to produce potted plants of these species during spring in the Mediterranean area.