bluuebunny/crossref_metadata_2025 huggingface dataset:
Supplementary Figure from Aberrant Transcript Usage Is Associated with Homologous Recombination Deficiency and Predicts Therapeutic Response
Authors: Kang Hyeon Gu , Hwangbo Haeun , Kim Myung Ji , Kim Sinae , Lee Eun Ji , Park Min Ji , Kim Jae-Weon , Kim Byoung-Gie , Cho Eun-Hae , Chang Suhwan , Lee Jung-Yun , Choi Jung Kyoon
Published: April 2023

Supplementary Figure from Aberrant Transcript Usage Is Associated with Homologous Recombination Deficiency and Predicts Therapeutic Response
Supplementary Data from HSP90 Mediates IFNγ-Induced Adaptive Resistance to Anti-PD-1 Immunotherapy
Authors: Liu Ke , Huang Jun , Liu Jiao , Li Changfeng , Kroemer Guido , Tang Daolin , Kang Rui
Published: April 2023

Supplementary Data from HSP90 Mediates IFNγ-Induced Adaptive Resistance to Anti-PD-1 Immunotherapy
Supplementary Data from Aberrant Transcript Usage Is Associated with Homologous Recombination Deficiency and Predicts Therapeutic Response
Authors: Kang Hyeon Gu , Hwangbo Haeun , Kim Myung Ji , Kim Sinae , Lee Eun Ji , Park Min Ji , Kim Jae-Weon , Kim Byoung-Gie , Cho Eun-Hae , Chang Suhwan , Lee Jung-Yun , Choi Jung Kyoon
Published: April 2023

Supplementary Data from Aberrant Transcript Usage Is Associated with Homologous Recombination Deficiency and Predicts Therapeutic Response
Supplementary Table from Functional Genomic Analysis of CDK4 and CDK6 Gene Dependency across Human Cancer Cell Lines
Authors: Zhang Zhouwei , Golomb Lior , Meyerson Matthew
Published: April 2023

Supplementary Table from Functional Genomic Analysis of CDK4 and CDK6 Gene Dependency across Human Cancer Cell Lines
Supplementary Figure from Functional Genomic Analysis of CDK4 and CDK6 Gene Dependency across Human Cancer Cell Lines
Authors: Zhang Zhouwei , Golomb Lior , Meyerson Matthew
Published: April 2023

Supplementary Figure from Functional Genomic Analysis of CDK4 and CDK6 Gene Dependency across Human Cancer Cell Lines
Supplementary Figure from Concurrent Activation of Kras and Canonical Wnt Signaling Induces Premalignant Lesions That Progress to Extrahepatic Biliary Cancer in Mice
Authors: Nagao Munemasa , Fukuda Akihisa , Omatsu Mayuki , Namikawa Mio , Sono Makoto , Fukunaga Yuichi , Masuda Tomonori , Araki Osamu , Yoshikawa Takaaki , Ogawa Satoshi , Masuo Kenji , Goto Norihiro , Hiramatsu Yukiko , Muta Yu , Tsuda Motoyuki , Maruno Takahisa , Nakanishi Yuki , Taketo Makoto Mark , Ferrer Jorge , Tsuruyama Tatsuaki , Nakanuma Yasuni , Taura Kojiro , Uemoto Shinji , Seno Hiroshi
Published: April 2023

Supplementary Figure from Concurrent Activation of Kras and Canonical Wnt Signaling Induces Premalignant Lesions That Progress to Extrahepatic Biliary Cancer in Mice
Table S3 from Polypharmacologic Reprogramming of Tumor-Associated Macrophages toward an Inflammatory Phenotype
Authors: Nishida-Aoki Nao , Gujral Taranjit S.
Published: April 2023

Table S3
Table S3
Table S2 from Polypharmacologic Reprogramming of Tumor-Associated Macrophages toward an Inflammatory Phenotype
Authors: Nishida-Aoki Nao , Gujral Taranjit S.
Published: April 2023

Table S2
Table S2
Supplementary Figure from Novel Calcium-Binding Ablating Mutations Induce Constitutive RET Activity and Drive Tumorigenesis
Authors: Tabata Junya , Nakaoku Takashi , Araki Mitsugu , Yoshino Ryunosuke , Kohsaka Shinji , Otsuka Ayaka , Ikegami Masachika , Ui Ayako , Kanno Shin-ichiro , Miyoshi Keiko , Matsumoto Shigeyuki , Sagae Yukari , Yasui Akira , Sekijima Masakazu , Mano Hiroyuki , Okuno Yasushi , Okamoto Aikou , Kohno Takashi
Published: April 2023

Supplementary Figure from Novel Calcium-Binding Ablating Mutations Induce Constitutive RET Activity and Drive Tumorigenesis
Supplementary Data from Selenium Modulates Cancer Cell Response to Pharmacologic Ascorbate
Authors: Jankowski Connor S.R. , Rabinowitz Joshua D.
Published: April 2023

Supplementary Data from Selenium Modulates Cancer Cell Response to Pharmacologic Ascorbate
Supplementary Table from Proteomic Mapping and Targeting of Mitotic Pericentriolar Material in Tumors Bearing Centrosome Amplification
Authors: Xie Bingteng , Pu Yang , Yang Fan , Chen Wei , Yue Wei , Ma Jihong , Zhang Na , Jiang Yuening , Wu Jiegen , Lin Yihan , Liang Xin , Wang Chu , Zou Peng , Li Mo
Published: April 2023

Supplementary Table from Proteomic Mapping and Targeting of Mitotic Pericentriolar Material in Tumors Bearing Centrosome Amplification
Supplementary Figure from Proteomic Mapping and Targeting of Mitotic Pericentriolar Material in Tumors Bearing Centrosome Amplification
Authors: Xie Bingteng , Pu Yang , Yang Fan , Chen Wei , Yue Wei , Ma Jihong , Zhang Na , Jiang Yuening , Wu Jiegen , Lin Yihan , Liang Xin , Wang Chu , Zou Peng , Li Mo
Published: April 2023

Supplementary Figure from Proteomic Mapping and Targeting of Mitotic Pericentriolar Material in Tumors Bearing Centrosome Amplification
Supplementary Figure from Activating mTOR Mutations Are Detrimental in Nutrient-Poor Conditions
Authors: Bielska Agata A. , Harrigan Caitlin F. , Kyung Yeon Ju , Morris Quaid , Palm Wilhelm , Thompson Craig B.
Published: April 2023

Supplementary Figure from Activating mTOR Mutations Are Detrimental in Nutrient-Poor Conditions
Supplementary Table from Pan-Cancer Analysis of Canonical and Modified miRNAs Enhances the Resolution of the Functional miRNAome in Cancer
Authors: Distefano Rosario , Tomasello Luisa , Rampioni Vinciguerra Gian Luca , Gasparini Pierluigi , Xiang Yujia , Bagnoli Marina , Marceca Gioacchino P. , Fadda Paolo , Laganà Alessandro , Acunzo Mario , Ma Qin , Nigita Giovanni , Croce Carlo M.
Published: April 2023

Supplementary Table from Pan-Cancer Analysis of Canonical and Modified miRNAs Enhances the Resolution of the Functional miRNAome in Cancer
Supplementary Data from Pan-Cancer Analysis of Canonical and Modified miRNAs Enhances the Resolution of the Functional miRNAome in Cancer
Authors: Distefano Rosario , Tomasello Luisa , Rampioni Vinciguerra Gian Luca , Gasparini Pierluigi , Xiang Yujia , Bagnoli Marina , Marceca Gioacchino P. , Fadda Paolo , Laganà Alessandro , Acunzo Mario , Ma Qin , Nigita Giovanni , Croce Carlo M.
Published: April 2023

Supplementary Data from Pan-Cancer Analysis of Canonical and Modified miRNAs Enhances the Resolution of the Functional miRNAome in Cancer
Supplementary Data from A Programmable In Vivo CRISPR Activation Model Elucidates the Oncogenic and Immunosuppressive Functions of MYC in Lung Adenocarcinoma
Authors: Thege Fredrik I. , Rupani Dhwani N. , Barathi Bhargavi Brahmendra , Manning Sara L. , Maitra Anirban , Rhim Andrew D. , Wörmann Sonja M.
Published: April 2023

Supplementary Data from A Programmable In Vivo CRISPR Activation Model Elucidates the Oncogenic and Immunosuppressive Functions of MYC in Lung Adenocarcinoma
Supplementary Data from Hypoxia-Reoxygenation Couples 3βHSD1 Enzyme and Cofactor Upregulation to Facilitate Androgen Biosynthesis and Hormone Therapy Resistance in Prostate Cancer
Authors: Qin Liang , Chung Yoon-Mi , Berk Michael , Naelitz Bryan , Zhu Ziqi , Klein Eric , Chakraborty Abhishek A. , Sharifi Nima
Published: April 2023

Supplementary Data from Hypoxia-Reoxygenation Couples 3βHSD1 Enzyme and Cofactor Upregulation to Facilitate Androgen Biosynthesis and Hormone Therapy Resistance in Prostate Cancer
Supplementary Data from Dll1-Mediated Notch Signaling Drives Tumor Cell Cross-talk with Cancer-Associated Fibroblasts to Promote Radioresistance in Breast Cancer
Authors: Nandi Ajeya , Debnath Rahul , Nayak Anupma , To Tsun Ki Jerrick , Thacker Gatha , Reilly Megan , Gumber Sanjeev , Karagounis Ilias , Li Ning , Lengner Christopher J. , Haldar Malay , Welm Alana L. , Blanco Andres M. , Thomas Christoforos , Chakrabarti Rumela
Published: April 2023

Supplementary Data from Dll1-Mediated Notch Signaling Drives Tumor Cell Cross-talk with Cancer-Associated Fibroblasts to Promote Radioresistance in Breast Cancer
Supplementary Data from Claudin-12 Deficiency Inhibits Tumor Growth by Impairing Transendothelial Migration of Myeloid-Derived Suppressor Cells
Authors: Cao Hong , Ni Chen , Han Le , Wang Ruoqi , Blasig Rosel , Haseloff Reiner , Qin Yue , Lan Jie , Lou Xiaohan , Ma Pan , Yao Xiaohan , Wang Linlin , Wang Fei , Zhu Linyu , Lei Ningjing , Blasig Ingolf E. , Qin Zhihai
Published: April 2023

Supplementary Data from Claudin-12 Deficiency Inhibits Tumor Growth by Impairing Transendothelial Migration of Myeloid-Derived Suppressor Cells
Supplementary Data from Oncohistone Mutations Occur at Functional Sites of Regulatory ADP-Ribosylation
Authors: Huang Dan , Camacho Cristel V. , Martire Sara , Nagari Anusha , Setlem Rohit , Gong Xuan , Edwards Andrea D. , Chiu Shu-Ping , Banaszynski Laura A. , Kraus W. Lee
Published: April 2023

Supplementary Data from Oncohistone Mutations Occur at Functional Sites of Regulatory ADP-Ribosylation
Supplementary Figure from β2-Microglobulin Maintains Glioblastoma Stem Cells and Induces M2-like Polarization of Tumor-Associated Macrophages
Authors: Li Daqi , Zhang Qian , Li Lu , Chen Kexin , Yang Junlei , Dixit Deobrat , Gimple Ryan C. , Ci Shusheng , Lu Chenfei , Hu Lang , Gao Jiancheng , Shan Danyang , Li Yangqing , Zhang Junxia , Shi Zhumei , Gu Danling , Yuan Wei , Wu Qiulian , Yang Kailin , Zhao Linjie , Qiu Zhixin , Lv Deguang , Gao Wei , Yang Hui , Lin Fan , Wang Qianghu , Man Jianghong , Li Chaojun , Tao Weiwei , Agnihotri Sameer , Qian Xu , Shi Yu , You Yongping , Zhang Nu , Rich Jeremy N. , Wang Xiuxing
Published: April 2023

Supplementary Figure from β2-Microglobulin Maintains Glioblastoma Stem Cells and Induces M2-like Polarization of Tumor-Associated Macrophages
Supplementary Table from The Interaction of SWI/SNF with the Ribosome Regulates Translation and Confers Sensitivity to Translation Pathway Inhibitors in Cancers with Complex Perturbations
Authors: Ulicna Livia , Kimmey Samuel C. , Weber Christopher M. , Allard Grace M. , Wang Aihui , Bui Nam Q. , Bendall Sean C. , Crabtree Gerald R. , Bean Gregory R. , Van Rechem Capucine
Published: April 2023

Supplementary Table from The Interaction of SWI/SNF with the Ribosome Regulates Translation and Confers Sensitivity to Translation Pathway Inhibitors in Cancers with Complex Perturbations
Supplementary Data from And-1 Coordinates with the FANCM Complex to Regulate Fanconi Anemia Signaling and Cisplatin Resistance
Authors: Zhang Yi , Li Jing , Zhou Yuan , Li Zhuqing , Peng Changmin , Pei Huadong , Zhu Wenge
Published: April 2023

Supplementary Data from And-1 Coordinates with the FANCM Complex to Regulate Fanconi Anemia Signaling and Cisplatin Resistance
Supplementary Data from Inhibition of EGFR Overcomes Acquired Lenvatinib Resistance Driven by STAT3–ABCB1 Signaling in Hepatocellular Carcinoma
Authors: Hu Beiyuan , Zou Tiantian , Qin Wei , Shen Xiaotian , Su Yinghan , Li Jianhua , Chen Yang , Zhang Ze , Sun Haoting , Zheng Yan , Wang Chao-Qun , Wang Zhengxin , Li Tian-En , Wang Shun , Zhu Le , Wang Xufeng , Fu Yan , Ren Xudong , Dong Qiongzhu , Qin Lun-Xiu
Published: April 2023

Supplementary Data from Inhibition of EGFR Overcomes Acquired Lenvatinib Resistance Driven by STAT3–ABCB1 Signaling in Hepatocellular Carcinoma
Supplementary Figure from Genomic Profiling of Bronchoalveolar Lavage Fluid in Lung Cancer
Authors: Nair Viswam S. , Hui Angela Bik-Yu , Chabon Jacob J. , Esfahani Mohammad S. , Stehr Henning , Nabet Barzin Y. , Zhou Li , Chaudhuri Aadel A. , Benson Jalen , Ayers Kelsey , Bedi Harmeet , Ramsey Meghan , Van Wert Ryan , Antic Sanja , Lui Natalie , Backhus Leah , Berry Mark , Sung Arthur W. , Massion Pierre P. , Shrager Joseph B. , Alizadeh Ash A. , Diehn Maximilian
Published: April 2023

Supplementary Figure from Genomic Profiling of Bronchoalveolar Lavage Fluid in Lung Cancer
Supplementary Data from Genomic Profiling of Bronchoalveolar Lavage Fluid in Lung Cancer
Authors: Nair Viswam S. , Hui Angela Bik-Yu , Chabon Jacob J. , Esfahani Mohammad S. , Stehr Henning , Nabet Barzin Y. , Zhou Li , Chaudhuri Aadel A. , Benson Jalen , Ayers Kelsey , Bedi Harmeet , Ramsey Meghan , Van Wert Ryan , Antic Sanja , Lui Natalie , Backhus Leah , Berry Mark , Sung Arthur W. , Massion Pierre P. , Shrager Joseph B. , Alizadeh Ash A. , Diehn Maximilian
Published: April 2023

Supplementary Data from Genomic Profiling of Bronchoalveolar Lavage Fluid in Lung Cancer
Supplementary Data from Alternative Lengthening of Telomeres in Cancer Confers a Vulnerability to Reactivation of p53 Function
Authors: Macha Shawn J. , Koneru Balakrishna , Burrow Trevor A. , Zhu Charles , Savitski Dzmitry , Rahman Rakhshanda L. , Ronaghan Catherine A. , Nance Jonas , McCoy Kristyn , Eslinger Cody , Reynolds C. Patrick
Published: April 2023

Supplementary Data from Alternative Lengthening of Telomeres in Cancer Confers a Vulnerability to Reactivation of p53 Function
Supplementary Table from Squalene Epoxidase Metabolic Dependency Is a Targetable Vulnerability in Castration-Resistant Prostate Cancer
Authors: Shangguan Xun , Ma Zehua , Yu Minghao , Ding Jie , Xue Wei , Qi Jun
Published: April 2023

Supplementary Table from Squalene Epoxidase Metabolic Dependency Is a Targetable Vulnerability in Castration-Resistant Prostate Cancer
Supplementary Data from Determinants and Effectiveness of Extending the Duration of Adjuvant Hormone Therapy beyond 5 Years in Patients with Breast Cancer
Authors: Zeng Erwei , He Wei , Sjölander Arvid , Bergqvist Jenny , Czene Kamila
Published: April 2023

Supplementary Data from Determinants and Effectiveness of Extending the Duration of Adjuvant Hormone Therapy beyond 5 Years in Patients with Breast Cancer
Supplementary Data from Intratumoral Heterogeneity and Immune Modulation in Lung Adenocarcinoma in Female Smokers and Never Smokers
Authors: Trefzer Timo B. , Schneider Marc A. , Jechow Katharina , Chua Robert Lorenz , Muley Thomas , Winter Hauke , Kriegsmann Mark , Meister Michael , Eils Roland , Conrad Christian
Published: April 2023

Supplementary Data from Intratumoral Heterogeneity and Immune Modulation in Lung Adenocarcinoma in Female Smokers and Never Smokers
Supplementary Data from A Protumorigenic mDia2–MIRO1 Axis Controls Mitochondrial Positioning and Function in Cancer-Associated Fibroblasts
Authors: Cangkrama Michael , Liu Huan , Whipman James , Zubair Maria , Matsushita Mai , Di Filippo Michela , Kopf Manfred , Innocenti Metello , Werner Sabine
Published: April 2023

Supplementary Data from A Protumorigenic mDia2–MIRO1 Axis Controls Mitochondrial Positioning and Function in Cancer-Associated Fibroblasts
Supplementary Table from An Immunogenic Model of KRAS-Mutant Lung Cancer Enables Evaluation of Targeted Therapy and Immunotherapy Combinations
Authors: Boumelha Jesse , de Carné Trécesson Sophie , Law Emily K. , Romero-Clavijo Pablo , Coelho Matthew A. , Ng Kevin W. , Mugarza Edurne , Moore Christopher , Rana Sareena , Caswell Deborah R. , Murillo Miguel , Hancock David C. , Argyris Prokopios P. , Brown William L. , Durfee Cameron , Larson Lindsay K. , Vogel Rachel I. , Suárez-Bonnet Alejandro , Priestnall Simon L. , East Philip , Ross Sarah J. , Kassiotis George , Molina-Arcas Miriam , Swanton Charles , Harris Reuben , Downward Julian
Published: April 2023

Supplementary Table from An Immunogenic Model of KRAS-Mutant Lung Cancer Enables Evaluation of Targeted Therapy and Immunotherapy Combinations
Supplementary Table from CHD1 Promotes Sensitivity to Aurora Kinase Inhibitors by Suppressing Interaction of AURKA with Its Coactivator TPX2
Authors: Li Haoyan , Wang Yin , Lin Kevin , Venkadakrishnan Varadha Balaji , Bakht Martin , Shi Wei , Meng Chenling , Zhang Jie , Tremble Kaitlyn , Liang Xin , Song Jian H. , Feng Xu , Van Vivien , Deng Pingna , Burks Jared K. , Aparicio Ana , Keyomarsi Khandan , Chen Junjie , Lu Yue , Beltran Himisha , Zhao Di
Published: April 2023

Supplementary Table from CHD1 Promotes Sensitivity to Aurora Kinase Inhibitors by Suppressing Interaction of AURKA with Its Coactivator TPX2
Supplementary Data from An Immunogenic Model of KRAS-Mutant Lung Cancer Enables Evaluation of Targeted Therapy and Immunotherapy Combinations
Authors: Boumelha Jesse , de Carné Trécesson Sophie , Law Emily K. , Romero-Clavijo Pablo , Coelho Matthew A. , Ng Kevin W. , Mugarza Edurne , Moore Christopher , Rana Sareena , Caswell Deborah R. , Murillo Miguel , Hancock David C. , Argyris Prokopios P. , Brown William L. , Durfee Cameron , Larson Lindsay K. , Vogel Rachel I. , Suárez-Bonnet Alejandro , Priestnall Simon L. , East Philip , Ross Sarah J. , Kassiotis George , Molina-Arcas Miriam , Swanton Charles , Harris Reuben , Downward Julian
Published: April 2023

Supplementary Data from An Immunogenic Model of KRAS-Mutant Lung Cancer Enables Evaluation of Targeted Therapy and Immunotherapy Combinations
Supplementary Data from Leveraging Therapy-Specific Polygenic Risk Scores to Predict Restrictive Lung Defects in Childhood Cancer Survivors
Authors: Im Cindy , Yuan Yan , Austin Eric D. , Stokes Dennis C. , Krasin Matthew J. , Davidoff Andrew M. , Sapkota Yadav , Wang Zhaoming , Ness Kirsten K. , Wilson Carmen L. , Armstrong Gregory T. , Hudson Melissa M. , Robison Leslie L. , Mulrooney Daniel A. , Yasui Yutaka
Published: April 2023

Supplementary Data from Leveraging Therapy-Specific Polygenic Risk Scores to Predict Restrictive Lung Defects in Childhood Cancer Survivors
Supplementary Figure from A First-in-Class Inhibitor of ER Coregulator PELP1 Targets ER+ Breast Cancer
Authors: Altwegg Kristin A. , Viswanadhapalli Suryavathi , Mann Monica , Chakravarty Dimple , Krishnan Samaya , Liu Zexuan , Liu Junhao , Pratap Uday P. , Ebrahimi Behnam , Sanchez John R. , Li Xiaonan , Ma Shihong , Park Ben H. , Santhamma Bindu , Chen Yidong , Lai Zhao , Raj Ganesh V. , Yuan Yaxia , Zhou Daohong , Sareddy Gangadhara R. , Tekmal Rajeshwar R. , McHardy Stan , Huang Tim H.-M. , Rao Manjeet K. , Vankayalapati Hariprasad , Vadlamudi Ratna K.
Published: April 2023

Supplementary Figure from A First-in-Class Inhibitor of ER Coregulator PELP1 Targets ER+ Breast Cancer
Supplementary Data from Cell–Cell Interactions Drive Metastasis of Circulating Tumor Microemboli
Authors: Tao Jianxin , Zhu Lei , Yakoub Mina , Reißfelder Christoph , Loges Sonja , Schölch Sebastian
Published: April 2023

Supplementary Data from Cell–Cell Interactions Drive Metastasis of Circulating Tumor Microemboli
Supplementary Table from FOXR2 Is an Epigenetically Regulated Pan-Cancer Oncogene That Activates ETS Transcriptional Circuits
Authors: Tsai Jessica W. , Cejas Paloma , Wang Dayle K. , Patel Smruti , Wu David W. , Arounleut Phonepasong , Wei Xin , Zhou Ningxuan , Syamala Sudeepa , Dubois Frank P.B. , Crane Alexander , Pelton Kristine , Vogelzang Jayne , Sousa Cecilia , Baguette Audrey , Chen Xiaolong , Condurat Alexandra L. , Dixon-Clarke Sarah E. , Zhou Kevin N. , Lu Sophie D. , Gonzalez Elizabeth M. , Chacon Madison S. , Digiacomo Jeromy J. , Kumbhani Rushil , Novikov Dana , Hunter J'Ya , Tsoli Maria , Ziegler David S. , Dirksen Uta , Jager Natalie , Balasubramanian Gnana Prakash , Kramm Christof M. , Nathrath Michaela , Bielack Stefan , Baker Suzanne J. , Zhang Jinghui , McFarland James M. , Getz Gad , Aguet François , Jabado Nada , Witt Olaf , Pfister Stefan M. , Ligon Keith L. , Hovestadt Volker , Kleinman Claudia L. , Long Henry , Jones David T.W. , Bandopadhayay Pratiti , Phoenix Timothy N.
Published: April 2023

Supplementary Table from FOXR2 Is an Epigenetically Regulated Pan-Cancer Oncogene That Activates ETS Transcriptional Circuits
Supplementary Figure from A Distinct Chromatin State Drives Therapeutic Resistance in Invasive Lobular Breast Cancer
Authors: Nardone Agostina , Qiu Xintao , Spisak Sandor , Nagy Zsuzsanna , Feiglin Ariel , Feit Avery , Cohen Feit Gabriela , Xie Yingtian , Font-Tello Alba , Guarducci Cristina , Hermida-Prado Francisco , Syamala Sudeepa , Lim Klothilda , Munoz Gomez Miguel , Pun Matthew , Cornwell MacIntosh , Liu Weihan , Ors Aysegul , Mohammed Hisham , Cejas Paloma , Brock Jane B. , Freedman Matthew L. , Winer Eric P. , Fu Xiaoyong , Schiff Rachel , Long Henry W. , Metzger Filho Otto , Jeselsohn Rinath
Published: April 2023

Supplementary Figure from A Distinct Chromatin State Drives Therapeutic Resistance in Invasive Lobular Breast Cancer
Supplementary Figure from FOXR2 Is an Epigenetically Regulated Pan-Cancer Oncogene That Activates ETS Transcriptional Circuits
Authors: Tsai Jessica W. , Cejas Paloma , Wang Dayle K. , Patel Smruti , Wu David W. , Arounleut Phonepasong , Wei Xin , Zhou Ningxuan , Syamala Sudeepa , Dubois Frank P.B. , Crane Alexander , Pelton Kristine , Vogelzang Jayne , Sousa Cecilia , Baguette Audrey , Chen Xiaolong , Condurat Alexandra L. , Dixon-Clarke Sarah E. , Zhou Kevin N. , Lu Sophie D. , Gonzalez Elizabeth M. , Chacon Madison S. , Digiacomo Jeromy J. , Kumbhani Rushil , Novikov Dana , Hunter J'Ya , Tsoli Maria , Ziegler David S. , Dirksen Uta , Jager Natalie , Balasubramanian Gnana Prakash , Kramm Christof M. , Nathrath Michaela , Bielack Stefan , Baker Suzanne J. , Zhang Jinghui , McFarland James M. , Getz Gad , Aguet François , Jabado Nada , Witt Olaf , Pfister Stefan M. , Ligon Keith L. , Hovestadt Volker , Kleinman Claudia L. , Long Henry , Jones David T.W. , Bandopadhayay Pratiti , Phoenix Timothy N.
Published: April 2023

Supplementary Figure from FOXR2 Is an Epigenetically Regulated Pan-Cancer Oncogene That Activates ETS Transcriptional Circuits
Supplementary Table from Bimodal Gene Expression in Patients with Cancer Provides Interpretable Biomarkers for Drug Sensitivity
Authors: Ba-Alawi Wail , Nair Sisira Kadambat , Li Bo , Mammoliti Anthony , Smirnov Petr , Mer Arvind Singh , Penn Linda Z. , Haibe-Kains Benjamin
Published: April 2023

Supplementary Table from Bimodal Gene Expression in Patients with Cancer Provides Interpretable Biomarkers for Drug Sensitivity
Supplementary Figure from DLGAP1-AS2–Mediated Phosphatidic Acid Synthesis Activates YAP Signaling and Confers Chemoresistance in Squamous Cell Carcinoma
Authors: Nan Yabing , Luo Qingyu , Wu Xiaowei , Liu Shi , Zhao Pengfei , Chang Wan , Zhou Aiping , Liu Zhihua
Published: April 2023

Supplementary Figure from DLGAP1-AS2–Mediated Phosphatidic Acid Synthesis Activates YAP Signaling and Confers Chemoresistance in Squamous Cell Carcinoma
Supplementary Figure from Bimodal Gene Expression in Patients with Cancer Provides Interpretable Biomarkers for Drug Sensitivity
Authors: Ba-Alawi Wail , Nair Sisira Kadambat , Li Bo , Mammoliti Anthony , Smirnov Petr , Mer Arvind Singh , Penn Linda Z. , Haibe-Kains Benjamin
Published: April 2023

Supplementary Figure from Bimodal Gene Expression in Patients with Cancer Provides Interpretable Biomarkers for Drug Sensitivity
Supplementary Figure from The Prostate Cancer Androgen Receptor Cistrome in African American Men Associates with Upregulation of Lipid Metabolism and Immune Response
Authors: Berchuck Jacob E. , Adib Elio , Abou Alaiwi Sarah , Dash Amit K. , Shin Jin Na , Lowder Dallin , McColl Collin , Castro Patricia , Carelli Ryan , Benedetti Elisa , Deng Jenny , Robertson Matthew , Baca Sylvan C. , Bell Connor , McClure Heather M. , El Zarif Talal , Davidsohn Matthew P. , Lakshminarayanan Gitanjali , Rizwan Kinza , Skapura Darlene G. , Grimm Sandra L. , Davis Christel M. , Ehli Erik A. , Kelleher Kaitlin M. , Seo Ji-Heui , Mitsiades Nicholas , Coarfa Cristian , Pomerantz Mark M. , Loda Massimo , Ittmann Michael , Freedman Matthew L. , Kaochar Salma
Published: April 2023

Supplementary Figure from The Prostate Cancer Androgen Receptor Cistrome in African American Men Associates with Upregulation of Lipid Metabolism and Immune Response
Supplementary Data from Bimodal Gene Expression in Patients with Cancer Provides Interpretable Biomarkers for Drug Sensitivity
Authors: Ba-Alawi Wail , Nair Sisira Kadambat , Li Bo , Mammoliti Anthony , Smirnov Petr , Mer Arvind Singh , Penn Linda Z. , Haibe-Kains Benjamin
Published: April 2023

Supplementary Data from Bimodal Gene Expression in Patients with Cancer Provides Interpretable Biomarkers for Drug Sensitivity
Supplementary Data from The Prostate Cancer Androgen Receptor Cistrome in African American Men Associates with Upregulation of Lipid Metabolism and Immune Response
Authors: Berchuck Jacob E. , Adib Elio , Abou Alaiwi Sarah , Dash Amit K. , Shin Jin Na , Lowder Dallin , McColl Collin , Castro Patricia , Carelli Ryan , Benedetti Elisa , Deng Jenny , Robertson Matthew , Baca Sylvan C. , Bell Connor , McClure Heather M. , El Zarif Talal , Davidsohn Matthew P. , Lakshminarayanan Gitanjali , Rizwan Kinza , Skapura Darlene G. , Grimm Sandra L. , Davis Christel M. , Ehli Erik A. , Kelleher Kaitlin M. , Seo Ji-Heui , Mitsiades Nicholas , Coarfa Cristian , Pomerantz Mark M. , Loda Massimo , Ittmann Michael , Freedman Matthew L. , Kaochar Salma
Published: April 2023

Supplementary Data from The Prostate Cancer Androgen Receptor Cistrome in African American Men Associates with Upregulation of Lipid Metabolism and Immune Response
Supplementary Dataset S2 from Loss of NF1 in Melanoma Confers Sensitivity to SYK Kinase Inhibition
Authors: Abecunas Cara , Whitehead Christopher E. , Ziemke Elizabeth K. , Baumann Douglas G. , Frankowski-McGregor Christy L. , Sebolt-Leopold Judith S. , Fallahi-Sichani Mohammad
Published: April 2023

Supplementary Dataset S2
Supplementary Data from Transposon Mutagenesis Reveals RBMS3 Silencing as a Promoter of Malignant Progression of BRAFV600E-Driven Lung Tumorigenesis
Authors: Vaishnavi Aria , Juan Joseph , Jacob Maebh , Stehn Christopher , Gardner Eric E. , Scherzer Michael T. , Schuman Sophia , Van Veen J. Edward , Murphy Brandon , Hackett Christopher S. , Dupuy Adam J. , Chmura Steven A. , van der Weyden Louise , Newberg Justin Y. , Liu Annie , Mann Karen , Rust Alistair G. , Weiss William A. , Kinsey Conan G. , Adams David J. , Grossmann Allie , Mann Michael B. , McMahon Martin
Published: April 2023

Supplementary Data from Transposon Mutagenesis Reveals RBMS3 Silencing as a Promoter of Malignant Progression of BRAFV600E-Driven Lung Tumorigenesis
Supplementary material from Endothelial RBPJ Is Essential for the Education of Tumor-Associated Macrophages
Authors: Alsina-Sanchis Elisenda , Mülfarth Ronja , Moll Iris , Böhn Sarah , Wiedmann Lena , Jordana-Urriza Lorea , Ziegelbauer Tara , Zimmer Eleni , Taylor Jacqueline , De Angelis Rigotti Francesca , Stögbauer Adrian , Giaimo Benedetto Daniele , Cerwenka Adelheid , Borggrefe Tilman , Fischer Andreas , Rodriguez-Vita Juan
Published: April 2023

It includes extended material and methods, and supplementary figures
Figure S.8 from Loss of LOXL2 Promotes Uterine Hypertrophy and Tumor Progression by Enhancing H3K36ac-Dependent Gene Expression
Authors: Lu Xufeng , Xin Dazhuan E. , Du Juanjuan K. , Zou Quanli C. , Wu Qian , Zhang Yanan S. , Deng Wenhai , Yue Jicheng , Fan Xing S. , Zeng Yuanyuan , Cheng Xiaju , Li Xue , Hou Zhaoyuan , Mohan Man , Zhao Ting C. , Lu Xiaomei , Chang Zhijie , Xu Liyan , Sun Yu , Zu Xiongbing , Zhang Yu , Chinn Y. Eugene
Published: April 2023

Figure S.8
Supplementary Table from WNT5A–RHOA Signaling Is a Driver of Tumorigenesis and Represents a Therapeutically Actionable Vulnerability in Small Cell Lung Cancer
Authors: Kim Kee-Beom , Kim Dong-Wook , Kim Youngchul , Tang Jun , Kirk Nicole , Gan Yongyu , Kim Bongjun , Fang Bingliang , Park Jae-ll , Zheng Yi , Park Kwon-Sik
Published: April 2023

Supplementary Table from WNT5A–RHOA Signaling Is a Driver of Tumorigenesis and Represents a Therapeutically Actionable Vulnerability in Small Cell Lung Cancer
Figure S.4 from Loss of LOXL2 Promotes Uterine Hypertrophy and Tumor Progression by Enhancing H3K36ac-Dependent Gene Expression
Authors: Lu Xufeng , Xin Dazhuan E. , Du Juanjuan K. , Zou Quanli C. , Wu Qian , Zhang Yanan S. , Deng Wenhai , Yue Jicheng , Fan Xing S. , Zeng Yuanyuan , Cheng Xiaju , Li Xue , Hou Zhaoyuan , Mohan Man , Zhao Ting C. , Lu Xiaomei , Chang Zhijie , Xu Liyan , Sun Yu , Zu Xiongbing , Zhang Yu , Chinn Y. Eugene
Published: April 2023

Figure S.4
Figure S.3 from Loss of LOXL2 Promotes Uterine Hypertrophy and Tumor Progression by Enhancing H3K36ac-Dependent Gene Expression
Authors: Lu Xufeng , Xin Dazhuan E. , Du Juanjuan K. , Zou Quanli C. , Wu Qian , Zhang Yanan S. , Deng Wenhai , Yue Jicheng , Fan Xing S. , Zeng Yuanyuan , Cheng Xiaju , Li Xue , Hou Zhaoyuan , Mohan Man , Zhao Ting C. , Lu Xiaomei , Chang Zhijie , Xu Liyan , Sun Yu , Zu Xiongbing , Zhang Yu , Chinn Y. Eugene
Published: April 2023

Figure S.3
Supplementary Table S2 from Transcriptional Antagonism by CDK8 Inhibition Improves Therapeutic Efficacy of MEK Inhibitors
Authors: Malone Clare F. , Kim Minjee , Alexe Gabriela , Engel Kathleen , Forman Alexandra B. , Robichaud Amanda , Conway Amy Saur , Goodale Amy , Meyer Ashleigh , Khalid Delan , Thayakumar Allen , Hatcher John M. , Gray Nathanael S. , Piccioni Federica , Stegmaier Kimberly
Published: April 2023

Supplementary Table S2 RNAseq
Table S6 from The RNA m6A Reader YTHDF1 Is Required for Acute Myeloid Leukemia Progression
Authors: Hong Yun-Guang , Yang Zhigang , Chen Yan , Liu Tian , Zheng Yuyuan , Zhou Chun , Wu Guo-Cai , Chen Yinhui , Xia Juan , Wen Ruiting , Liu Wenxin , Zhao Yi , Chen Jin , Gao Xiangwei , Chen Zhanghui
Published: April 2023

Table S6
Supplementary Table S1 from Transcriptional Antagonism by CDK8 Inhibition Improves Therapeutic Efficacy of MEK Inhibitors
Authors: Malone Clare F. , Kim Minjee , Alexe Gabriela , Engel Kathleen , Forman Alexandra B. , Robichaud Amanda , Conway Amy Saur , Goodale Amy , Meyer Ashleigh , Khalid Delan , Thayakumar Allen , Hatcher John M. , Gray Nathanael S. , Piccioni Federica , Stegmaier Kimberly
Published: April 2023

Supplementary Table S1 STARS Scores
Table S3 from The RNA m6A Reader YTHDF1 Is Required for Acute Myeloid Leukemia Progression
Authors: Hong Yun-Guang , Yang Zhigang , Chen Yan , Liu Tian , Zheng Yuyuan , Zhou Chun , Wu Guo-Cai , Chen Yinhui , Xia Juan , Wen Ruiting , Liu Wenxin , Zhao Yi , Chen Jin , Gao Xiangwei , Chen Zhanghui
Published: April 2023

Table S3
Table S2 from The RNA m6A Reader YTHDF1 Is Required for Acute Myeloid Leukemia Progression
Authors: Hong Yun-Guang , Yang Zhigang , Chen Yan , Liu Tian , Zheng Yuyuan , Zhou Chun , Wu Guo-Cai , Chen Yinhui , Xia Juan , Wen Ruiting , Liu Wenxin , Zhao Yi , Chen Jin , Gao Xiangwei , Chen Zhanghui
Published: April 2023

Table S2
Supplementary Table S9 from JAK–STAT Signaling in Inflammatory Breast Cancer Enables Chemotherapy-Resistant Cell States
Authors: Stevens Laura E. , Peluffo Guillermo , Qiu Xintao , Temko Daniel , Fassl Anne , Li Zheqi , Trinh Anne , Seehawer Marco , Jovanović Bojana , Alečković Maša , Wilde Callahan M. , Geck Renee C. , Shu Shaokun , Kingston Natalie L. , Harper Nicholas W. , Almendro Vanessa , Pyke Alanna L. , Egri Shawn B. , Papanastasiou Malvina , Clement Kendell , Zhou Ningxuan , Walker Sarah , Salas Jacqueline , Park So Yeon , Frank David A. , Meissner Alexander , Jaffe Jacob D. , Sicinski Piotr , Toker Alex , Michor Franziska , Long Henry W. , Overmoyer Beth A. , Polyak Kornelia
Published: April 2023

Supplementary Table S9
Supplementary Figure from Distinct Cell Adhesion Signature Defines Glioblastoma Myeloid-Derived Suppressor Cell Subsets
Authors: Bayik Defne , Bartels Cynthia F. , Lovrenert Katreya , Watson Dionysios C. , Zhang Duo , Kay Kristen , Lee Juyeun , Lauko Adam , Johnson Sadie , Lo Alice , Silver Daniel J. , McGraw Mary , Grabowski Matthew , Mohammadi Alireza M. , Veglia Filippo , Fan Yi , Vogelbaum Michael A. , Scacheri Peter , Lathia Justin D.
Published: April 2023

Supplementary Figure from Distinct Cell Adhesion Signature Defines Glioblastoma Myeloid-Derived Suppressor Cell Subsets
Supplementary Table S8 from JAK–STAT Signaling in Inflammatory Breast Cancer Enables Chemotherapy-Resistant Cell States
Authors: Stevens Laura E. , Peluffo Guillermo , Qiu Xintao , Temko Daniel , Fassl Anne , Li Zheqi , Trinh Anne , Seehawer Marco , Jovanović Bojana , Alečković Maša , Wilde Callahan M. , Geck Renee C. , Shu Shaokun , Kingston Natalie L. , Harper Nicholas W. , Almendro Vanessa , Pyke Alanna L. , Egri Shawn B. , Papanastasiou Malvina , Clement Kendell , Zhou Ningxuan , Walker Sarah , Salas Jacqueline , Park So Yeon , Frank David A. , Meissner Alexander , Jaffe Jacob D. , Sicinski Piotr , Toker Alex , Michor Franziska , Long Henry W. , Overmoyer Beth A. , Polyak Kornelia
Published: April 2023

Supplementary Table S8
Supplementary Table S7 from JAK–STAT Signaling in Inflammatory Breast Cancer Enables Chemotherapy-Resistant Cell States
Authors: Stevens Laura E. , Peluffo Guillermo , Qiu Xintao , Temko Daniel , Fassl Anne , Li Zheqi , Trinh Anne , Seehawer Marco , Jovanović Bojana , Alečković Maša , Wilde Callahan M. , Geck Renee C. , Shu Shaokun , Kingston Natalie L. , Harper Nicholas W. , Almendro Vanessa , Pyke Alanna L. , Egri Shawn B. , Papanastasiou Malvina , Clement Kendell , Zhou Ningxuan , Walker Sarah , Salas Jacqueline , Park So Yeon , Frank David A. , Meissner Alexander , Jaffe Jacob D. , Sicinski Piotr , Toker Alex , Michor Franziska , Long Henry W. , Overmoyer Beth A. , Polyak Kornelia
Published: April 2023

Supplementary Table S7
Supplementary Table S6 from JAK–STAT Signaling in Inflammatory Breast Cancer Enables Chemotherapy-Resistant Cell States
Authors: Stevens Laura E. , Peluffo Guillermo , Qiu Xintao , Temko Daniel , Fassl Anne , Li Zheqi , Trinh Anne , Seehawer Marco , Jovanović Bojana , Alečković Maša , Wilde Callahan M. , Geck Renee C. , Shu Shaokun , Kingston Natalie L. , Harper Nicholas W. , Almendro Vanessa , Pyke Alanna L. , Egri Shawn B. , Papanastasiou Malvina , Clement Kendell , Zhou Ningxuan , Walker Sarah , Salas Jacqueline , Park So Yeon , Frank David A. , Meissner Alexander , Jaffe Jacob D. , Sicinski Piotr , Toker Alex , Michor Franziska , Long Henry W. , Overmoyer Beth A. , Polyak Kornelia
Published: April 2023

Supplementary Table S6
Supplementary Movie S1 from MNX1-AS1 Promotes Phase Separation of IGF2BP1 to Drive c-Myc–Mediated Cell-Cycle Progression and Proliferation in Lung Cancer
Authors: Zhu Qingqing , Zhang Chongguo , Qu Tianyu , Lu Xiyi , He Xuezhi , Li Wei , Yin Dandan , Han Liang , Guo Renhua , Zhang Erbao
Published: April 2023

The quick rearrangement of IGF2BP1 droplets. A time-lapse movie of droplets formed by IGF2BP1 undergoes a fusion event.
Supplementary Materials and Methods from MNX1-AS1 Promotes Phase Separation of IGF2BP1 to Drive c-Myc–Mediated Cell-Cycle Progression and Proliferation in Lung Cancer
Authors: Zhu Qingqing , Zhang Chongguo , Qu Tianyu , Lu Xiyi , He Xuezhi , Li Wei , Yin Dandan , Han Liang , Guo Renhua , Zhang Erbao
Published: April 2023

Supplementary Materials and Methods
Supplementary Figure S1-S5 from MNX1-AS1 Promotes Phase Separation of IGF2BP1 to Drive c-Myc–Mediated Cell-Cycle Progression and Proliferation in Lung Cancer
Authors: Zhu Qingqing , Zhang Chongguo , Qu Tianyu , Lu Xiyi , He Xuezhi , Li Wei , Yin Dandan , Han Liang , Guo Renhua , Zhang Erbao
Published: April 2023

Supplementary Figure S1-S5
Supplementary Table S1 from JAK–STAT Signaling in Inflammatory Breast Cancer Enables Chemotherapy-Resistant Cell States
Authors: Stevens Laura E. , Peluffo Guillermo , Qiu Xintao , Temko Daniel , Fassl Anne , Li Zheqi , Trinh Anne , Seehawer Marco , Jovanović Bojana , Alečković Maša , Wilde Callahan M. , Geck Renee C. , Shu Shaokun , Kingston Natalie L. , Harper Nicholas W. , Almendro Vanessa , Pyke Alanna L. , Egri Shawn B. , Papanastasiou Malvina , Clement Kendell , Zhou Ningxuan , Walker Sarah , Salas Jacqueline , Park So Yeon , Frank David A. , Meissner Alexander , Jaffe Jacob D. , Sicinski Piotr , Toker Alex , Michor Franziska , Long Henry W. , Overmoyer Beth A. , Polyak Kornelia
Published: April 2023

Supplementary Table S1
Supplementary Data from Lipid-Associated Macrophages Are Induced by Cancer-Associated Fibroblasts and Mediate Immune Suppression in Breast Cancer
Authors: Timperi Eleonora , Gueguen Paul , Molgora Martina , Magagna Ilaria , Kieffer Yann , Lopez-Lastra Silvia , Sirven Philemon , Baudrin Laura G. , Baulande Sylvain , Nicolas André , Champenois Gabriel , Meseure Didier , Vincent-Salomon Anne , Tardivon Anne , Laas Enora , Soumelis Vassili , Colonna Marco , Mechta-Grigoriou Fatima , Amigorena Sebastian , Romano Emanuela
Published: April 2023

Supplementary Data from Lipid-Associated Macrophages Are Induced by Cancer-Associated Fibroblasts and Mediate Immune Suppression in Breast Cancer
Supplementary Tables from Combination Therapies with CDK4/6 Inhibitors to Treat KRAS-Mutant Pancreatic Cancer
Authors: Goodwin Craig M. , Waters Andrew M. , Klomp Jennifer E. , Javaid Sehrish , Bryant Kirsten L. , Stalnecker Clint A. , Drizyte-Miller Kristina , Papke Bjoern , Yang Runying , Amparo Amber M. , Ozkan-Dagliyan Irem , Baldelli Elisa , Calvert Valerie , Pierobon Mariaelena , Sorrentino Jessica A. , Beelen Andrew P. , Bublitz Natalie , Lüthen Mareen , Wood Kris C. , Petricoin Emanuel F. , Sers Christine , McRee Autumn J. , Cox Adrienne D. , Der Channing J.
Published: April 2023

Supplementary Tables
Supplementary Data and Materials from Combination Therapies with CDK4/6 Inhibitors to Treat KRAS-Mutant Pancreatic Cancer
Authors: Goodwin Craig M. , Waters Andrew M. , Klomp Jennifer E. , Javaid Sehrish , Bryant Kirsten L. , Stalnecker Clint A. , Drizyte-Miller Kristina , Papke Bjoern , Yang Runying , Amparo Amber M. , Ozkan-Dagliyan Irem , Baldelli Elisa , Calvert Valerie , Pierobon Mariaelena , Sorrentino Jessica A. , Beelen Andrew P. , Bublitz Natalie , Lüthen Mareen , Wood Kris C. , Petricoin Emanuel F. , Sers Christine , McRee Autumn J. , Cox Adrienne D. , Der Channing J.
Published: April 2023

Supplementary Data and Materials
Figure S7 page2 from Combination Therapies with CDK4/6 Inhibitors to Treat KRAS-Mutant Pancreatic Cancer
Authors: Goodwin Craig M. , Waters Andrew M. , Klomp Jennifer E. , Javaid Sehrish , Bryant Kirsten L. , Stalnecker Clint A. , Drizyte-Miller Kristina , Papke Bjoern , Yang Runying , Amparo Amber M. , Ozkan-Dagliyan Irem , Baldelli Elisa , Calvert Valerie , Pierobon Mariaelena , Sorrentino Jessica A. , Beelen Andrew P. , Bublitz Natalie , Lüthen Mareen , Wood Kris C. , Petricoin Emanuel F. , Sers Christine , McRee Autumn J. , Cox Adrienne D. , Der Channing J.
Published: April 2023

Figure S7 page2
Figure S6 page1 from Combination Therapies with CDK4/6 Inhibitors to Treat KRAS-Mutant Pancreatic Cancer
Authors: Goodwin Craig M. , Waters Andrew M. , Klomp Jennifer E. , Javaid Sehrish , Bryant Kirsten L. , Stalnecker Clint A. , Drizyte-Miller Kristina , Papke Bjoern , Yang Runying , Amparo Amber M. , Ozkan-Dagliyan Irem , Baldelli Elisa , Calvert Valerie , Pierobon Mariaelena , Sorrentino Jessica A. , Beelen Andrew P. , Bublitz Natalie , Lüthen Mareen , Wood Kris C. , Petricoin Emanuel F. , Sers Christine , McRee Autumn J. , Cox Adrienne D. , Der Channing J.
Published: April 2023

Figure S6 page1
Supplementary Data from Inhibition of Melanoma Cell–Intrinsic Tim-3 Stimulates MAPK-Dependent Tumorigenesis
Authors: Schatton Tobias , Itoh Yuta , Martins Christina , Rasbach Erik , Singh Praveen , Silva Mariana , Mucciarone Kyla , Heppt Markus V. , Geddes-Sweeney Jenna , Stewart Kate , Brandenburg Anne , Liang Jennifer , Dimitroff Charles J. , Mihm Martin C. , Landsberg Jennifer , Schlapbach Christoph , Lian Christine G. , Murphy George F. , Kupper Thomas S. , Ramsey Matthew R. , Barthel Steven R.
Published: April 2023

Supplementary Data from Inhibition of Melanoma Cell–Intrinsic Tim-3 Stimulates MAPK-Dependent Tumorigenesis
Figure S5 page2 from Combination Therapies with CDK4/6 Inhibitors to Treat KRAS-Mutant Pancreatic Cancer
Authors: Goodwin Craig M. , Waters Andrew M. , Klomp Jennifer E. , Javaid Sehrish , Bryant Kirsten L. , Stalnecker Clint A. , Drizyte-Miller Kristina , Papke Bjoern , Yang Runying , Amparo Amber M. , Ozkan-Dagliyan Irem , Baldelli Elisa , Calvert Valerie , Pierobon Mariaelena , Sorrentino Jessica A. , Beelen Andrew P. , Bublitz Natalie , Lüthen Mareen , Wood Kris C. , Petricoin Emanuel F. , Sers Christine , McRee Autumn J. , Cox Adrienne D. , Der Channing J.
Published: April 2023

Figure S5 page2
Supplementary Data from Epithelial-to-Mesenchymal Transition Supports Ovarian Carcinosarcoma Tumorigenesis and Confers Sensitivity to Microtubule Targeting with Eribulin
Authors: Ho Gwo Yaw , Kyran Elizabeth L. , Bedo Justin , Wakefield Matthew J. , Ennis Darren P. , Mirza Hasan B. , Vandenberg Cassandra J. , Lieschke Elizabeth , Farrell Andrew , Hadla Anthony , Lim Ratana , Dall Genevieve , Vince James E. , Chua Ngee Kiat , Kondrashova Olga , Upstill-Goddard Rosanna , Bailey Ulla-Maja , Dowson Suzanne , Roxburgh Patricia , Glasspool Rosalind M. , Bryson Gareth , Biankin Andrew V. , Cooke Susanna L. , Ratnayake Gayanie , McNally Orla , Traficante Nadia , DeFazio Anna , Weroha S. John , Bowtell David D. , McNeish Iain A. , Papenfuss Anthony T. , Scott Clare L. , Barker Holly E.
Published: April 2023

Supplementary methods and figures
Figure S3 page2 from Combination Therapies with CDK4/6 Inhibitors to Treat KRAS-Mutant Pancreatic Cancer
Authors: Goodwin Craig M. , Waters Andrew M. , Klomp Jennifer E. , Javaid Sehrish , Bryant Kirsten L. , Stalnecker Clint A. , Drizyte-Miller Kristina , Papke Bjoern , Yang Runying , Amparo Amber M. , Ozkan-Dagliyan Irem , Baldelli Elisa , Calvert Valerie , Pierobon Mariaelena , Sorrentino Jessica A. , Beelen Andrew P. , Bublitz Natalie , Lüthen Mareen , Wood Kris C. , Petricoin Emanuel F. , Sers Christine , McRee Autumn J. , Cox Adrienne D. , Der Channing J.
Published: April 2023

Figure S3 page2
Figure S2 page3 from Combination Therapies with CDK4/6 Inhibitors to Treat KRAS-Mutant Pancreatic Cancer
Authors: Goodwin Craig M. , Waters Andrew M. , Klomp Jennifer E. , Javaid Sehrish , Bryant Kirsten L. , Stalnecker Clint A. , Drizyte-Miller Kristina , Papke Bjoern , Yang Runying , Amparo Amber M. , Ozkan-Dagliyan Irem , Baldelli Elisa , Calvert Valerie , Pierobon Mariaelena , Sorrentino Jessica A. , Beelen Andrew P. , Bublitz Natalie , Lüthen Mareen , Wood Kris C. , Petricoin Emanuel F. , Sers Christine , McRee Autumn J. , Cox Adrienne D. , Der Channing J.
Published: April 2023

Figure S2 page3
Figure S2 page2 from Combination Therapies with CDK4/6 Inhibitors to Treat KRAS-Mutant Pancreatic Cancer
Authors: Goodwin Craig M. , Waters Andrew M. , Klomp Jennifer E. , Javaid Sehrish , Bryant Kirsten L. , Stalnecker Clint A. , Drizyte-Miller Kristina , Papke Bjoern , Yang Runying , Amparo Amber M. , Ozkan-Dagliyan Irem , Baldelli Elisa , Calvert Valerie , Pierobon Mariaelena , Sorrentino Jessica A. , Beelen Andrew P. , Bublitz Natalie , Lüthen Mareen , Wood Kris C. , Petricoin Emanuel F. , Sers Christine , McRee Autumn J. , Cox Adrienne D. , Der Channing J.
Published: April 2023

Figure S2 page2
Figure S1 page4 from Combination Therapies with CDK4/6 Inhibitors to Treat KRAS-Mutant Pancreatic Cancer
Authors: Goodwin Craig M. , Waters Andrew M. , Klomp Jennifer E. , Javaid Sehrish , Bryant Kirsten L. , Stalnecker Clint A. , Drizyte-Miller Kristina , Papke Bjoern , Yang Runying , Amparo Amber M. , Ozkan-Dagliyan Irem , Baldelli Elisa , Calvert Valerie , Pierobon Mariaelena , Sorrentino Jessica A. , Beelen Andrew P. , Bublitz Natalie , Lüthen Mareen , Wood Kris C. , Petricoin Emanuel F. , Sers Christine , McRee Autumn J. , Cox Adrienne D. , Der Channing J.
Published: April 2023

Figure S1 page4
Supplementary Data from Single-Cell Dissection of the Multiomic Landscape of High-Grade Serous Ovarian Cancer
Authors: Wang Yicheng , Xie Haoling , Chang Xiaohong , Hu Wenqi , Li Mengyao , Li Yi , Liu Huiping , Cheng Hongyan , Wang Shang , Zhou Ling , Shen Danhua , Dou Sha , Ma Ruiqiong , Mao Yunuo , Zhu Honglan , Zhang Xiaobo , Zheng Yuxuan , Ye Xue , Wen Lu , Kee Kehkooi , Cui Heng , Tang Fuchou
Published: April 2023

Supplementary Data from Single-Cell Dissection of the Multiomic Landscape of High-Grade Serous Ovarian Cancer
Table S1, S3 and S8 from Single-Cell Analysis Reveals a CD4+ T-cell Cluster That Correlates with PD-1 Blockade Efficacy
Authors: Kagamu Hiroshi , Yamasaki Satoshi , Kitano Shigehisa , Yamaguchi Ou , Mouri Atsuto , Shiono Ayako , Nishihara Fuyumi , Miura Yu , Hashimoto Kosuke , Imai Hisao , Kaira Kyoichi , Kobayashi Kunihiko , Kanai Yae , Shibata Tatsuhiro , Horimoto Katsuhisa
Published: April 2023

Supplementary Table 1, 3, 8.
Supplementary Data from Targeting DNA Repair with Combined Inhibition of NHEJ and MMEJ Induces Synthetic Lethality in TP53-Mutant Cancers
Authors: Patterson-Fortin Jeffrey , Bose Arindam , Tsai Wei-Chih , Grochala Carter , Nguyen Huy , Zhou Jia , Parmar Kalindi , Lazaro Jean-Bernard , Liu Joyce , McQueen Kelsey , Shapiro Geoffrey I. , Kozono David , D'Andrea Alan D.
Published: April 2023

Supplementary Data from Targeting DNA Repair with Combined Inhibition of NHEJ and MMEJ Induces Synthetic Lethality in TP53-Mutant Cancers
Table S1 from Targeting STAT5 Signaling Overcomes Resistance to IDH Inhibitors in Acute Myeloid Leukemia through Suppression of Stemness
Authors: Liu Alex C.H. , Cathelin Severine , Yang Yitong , Dai David L. , Ayyathan Dhanoop Manikoth , Hosseini Mohsen , Minden Mark D. , Tierens Anne , Chan Steven M.
Published: April 2023

Materials
Fig. S5 from Targeting STAT5 Signaling Overcomes Resistance to IDH Inhibitors in Acute Myeloid Leukemia through Suppression of Stemness
Authors: Liu Alex C.H. , Cathelin Severine , Yang Yitong , Dai David L. , Ayyathan Dhanoop Manikoth , Hosseini Mohsen , Minden Mark D. , Tierens Anne , Chan Steven M.
Published: April 2023

Supplementary Figure 5 and legend
Fig. S3 from Targeting STAT5 Signaling Overcomes Resistance to IDH Inhibitors in Acute Myeloid Leukemia through Suppression of Stemness
Authors: Liu Alex C.H. , Cathelin Severine , Yang Yitong , Dai David L. , Ayyathan Dhanoop Manikoth , Hosseini Mohsen , Minden Mark D. , Tierens Anne , Chan Steven M.
Published: April 2023

Supplementary Figure 3 and legend
Supplementary Data from Extracellular Vesicle-Mediated Transfer of LncRNA IGFL2-AS1 Confers Sunitinib Resistance in Renal Cell Carcinoma
Authors: Pan Yihui , Lu Xuanxuan , Shu Guannan , Cen Junjie , Lu Jun , Zhou Mi , Huang Kangbo , Dong Jiaqi , Li Jiaying , Lin Haishan , Song Hongde , Xu Quanhui , Han Hui , Chen Zhenhua , Chen Wei , Luo Junhang , Wei Jinhuan , Zhang Jiaxing
Published: April 2023

Supplementary Figure S1-S10, supplementary table S1-S8, supplementary methods. Figure S1. The construction of sunitinib-resistant model and validation of sunitinib resistance. Figure S2. Screening and identification of lncRNA IGFL2-AS1 related to sunitinib resistance. Figure S3. IGFL2-AS1 promotes sunitinib resistance of RCC cells in vitro and in vivo. Figure S4. IGFL2-AS1 overexpression enhances autophagy in RCC cells by regulating alternative splicing of TP53INP2. Figure S5. IGFL2-AS1 functions by binding to hnRNPC protein. Figure S6. IGFL2-AS1 regulates alternative splicing of TP53INP2 through competitively binding to hnRNPC. Figure S7. hnRNPC mediates IGFL2-AS1 packaging into EVs and transmission of sunitinib resistance. Figure S8. m6A epigenetic modification is critical to IGFL2-AS1 interaction with hnRNPC. Figure S9. Characteristics of C-SLN nanoparticles and in vivo application of C-SLN/ASO-IGFL2-AS1 complexes. Figure S10. Extended applicability of IGFL2-AS1 to resistance of cabozantinib and axitinib. Supplementary Table S1. Correlations between IGFL2-AS1 tissue expressions and clinical characteristics of 72 ccRCC patients in the SYSU Cohort. Supplementary Table S2. Univariate and multivariate cox regression analysis of variables associated with PFS in the SYSU cohort. Supplementary Table S3. Correlations between IGFL2-AS1 expressions in serum-derived EVs and clinical characteristics of 60 ccRCC patients in the SYSU Cohort. Supplementary Table S4. Uivariate and multivariate cox regression analysis of variables associated with PFS in the SYSU cohort. Supplementary Table S5. Clinical characteristics of RCC patients in the PDX models. Supplementary Table S6. Targeting sequence of siRNA and ASO. Supplementary Table S7. Primers used in this study for qRT-PCR analysis. Supplementary Table S8. Primary antibodies applied in this study.
Supplementary Figure from Postoperative Plasmacytoid Dendritic Cells Secrete IFNα to Promote Recruitment of Myeloid-Derived Suppressor Cells and Drive Hepatocellular Carcinoma Recurrence
Authors: Pang Li , Yeung Oscar W.H. , Ng Kevin T.P. , Liu Hui , Zhu Jiye , Liu Jiang , Yang Xinxiang , Ding Tao , Qiu Wenqi , Wang Yuewen , Chiu T.L. Shirley , Chen Zhiwei , Lo Chung-Mau , Man Kwan
Published: April 2023

Supplementary Figure from Postoperative Plasmacytoid Dendritic Cells Secrete IFNα to Promote Recruitment of Myeloid-Derived Suppressor Cells and Drive Hepatocellular Carcinoma Recurrence