bluuebunny/crossref_metadata_2025 huggingface dataset:
Identification and validation of an immunogenic subtype of gastric cancer with abundant intratumoural CD103+CD8+ T cells conferring favourable prognosis
Authors: Li Ruochen , Liu Hao , Cao Yifan , Wang Jieti , Chen Yifan , Qi Yangyang , Lv Kunpeng , Liu Xin , Yu Kuan , Lin Chao , Zhang Heng , He Hongyong , Li He , Chen Lingli , Shen Zhenbin , Qin Jing , Zhang Weijuan , Sun Yihong , Xu Jiejie
Published: March 2020

Background

Intratumoural CD103+CD8+ T cells have been linked to prolonged survival in several malignancies. However, the clinical significance of CD103+CD8+ T cells in gastric cancer remains unexplored.

Methods

Gastric cancer tissues from Zhongshan Hospital and data from Gene Expression Omnibus were obtained and analysed. Immunohistochemistry and flow cytometry were performed to detect the number and phenotypical characteristics of CD103+CD8+ T cells. The effect of programmed cell death protein-1 (PD-1) blockade on CD103+CD8+ T cells was evaluated with the use of an in vitro study based on fresh tumour tissues.

Results

CD103+CD8+ T cells predicted superior overall survival and provided better prognostic power than total CD8+ T cells in gastric cancer. Patients with high CD103+CD8+ T cell infiltration also gained more benefit from adjuvant chemotherapy. Flow cytometry analysis showed that CD103+CD8+ T cells exerted superior anti-tumour effects with stronger retention capacity and cytotoxicity. Moreover, an in vitro study showed that CD103+CD8+ T cells were more functionally restored after PD-1 blockade than CD103-CD8+ T cells.

Conclusions

CD103+CD8+ T cells might be a useful marker to predict prognosis and therapeutic efficacy for gastric cancer patients. Efforts to increase intratumoural CD103+CD8+ T cell frequency might be a novel therapeutic strategy in gastric cancer.
Subpopulation targeting of pyruvate dehydrogenase and GLUT1 decouples metabolic heterogeneity during collective cancer cell invasion
Authors: Commander R. , Wei C. , Sharma A. , Mouw J. K. , Burton L. J. , Summerbell E. , Mahboubi D. , Peterson R. J. , Konen J. , Zhou W. , Du Y. , Fu H. , Shanmugam M. , Marcus A. I.
Published: March 2020

Phenotypic heterogeneity exists within collectively invading packs of tumor cells, suggesting that cellular subtypes cooperate to drive invasion and metastasis. Here, we take a chemical biology approach to probe cell:cell cooperation within the collective invasion pack. These data reveal metabolic heterogeneity within invasive chains, in which leader cells preferentially utilize mitochondrial respiration and trailing follower cells rely on elevated glucose uptake. We define a pyruvate dehydrogenase (PDH) dependency in leader cells that can be therapeutically exploited with the mitochondria-targeting compound alexidine dihydrochloride. In contrast, follower cells highly express glucose transporter 1 (GLUT1), which sustains an elevated level of glucose uptake required to maintain proliferation. Co-targeting of both leader and follower cells with PDH and GLUT1 inhibitors, respectively, inhibits cell growth and collective invasion. Taken together, our work reveals metabolic heterogeneity within the lung cancer collective invasion pack and provides rationale for co-targeting PDH and GLUT1 to inhibit collective invasion.
A Staphylococcus pro-apoptotic peptide induces acute exacerbation of pulmonary fibrosis
Authors: D’Alessandro-Gabazza Corina N. , Kobayashi Tetsu , Yasuma Taro , Toda Masaaki , Kim Heejin , Fujimoto Hajime , Hataji Osamu , Takeshita Atsuro , Nishihama Kota , Okano Tomohito , Okano Yuko , Nishii Yoichi , Tomaru Atsushi , Fujiwara Kentaro , D’Alessandro Valeria Fridman , Abdel-Hamid Ahmed M. , Ren Yudong , Pereira Gabriel V. , Wright Christy L. , Hernandez Alvaro , Fields Christopher J. , Yau Peter M. , Wang Shujie , Mizoguchi Akira , Fukumura Masayuki , Ohtsuka Junpei , Nosaka Tetsuya , Kataoka Kensuke , Kondoh Yasuhiro , Wu Jing , Kawagishi Hirokazu , Yano Yutaka , Mackie Roderick I. , Cann Isaac , Gabazza Esteban C.
Published: March 2020

Idiopathic pulmonary fibrosis (IPF) is a chronic and fatal disease of unknown etiology; however, apoptosis of lung alveolar epithelial cells plays a role in disease progression. This intractable disease is associated with increased abundance ofStaphylococcusandStreptococcusin the lungs, yet their roles in disease pathogenesis remain elusive. Here, we report thatStaphylococcus nepalensisreleases corisin, a peptide conserved in diverse staphylococci, to induce apoptosis of lung epithelial cells. The disease in mice exhibits acute exacerbation after intrapulmonary instillation of corisin or after lung infection with corisin-harboringS. nepalensiscompared to untreated mice or mice infected with bacteria lacking corisin. Correspondingly, the lung corisin levels are significantly increased in human IPF patients with acute exacerbation compared to patients without disease exacerbation. Our results suggest that bacteria shedding corisin are involved in acute exacerbation of IPF, yielding insights to the molecular basis for the elevation of staphylococci in pulmonary fibrosis.
Manipulating disordered plasmonic systems by external cavity with transition from broadband absorption to reconfigurable reflection
Authors: Mao Peng , Liu Changxu , Song Fengqi , Han Min , Maier Stefan A. , Zhang Shuang
Published: March 2020

Disordered biostructures are ubiquitous in nature, usually generating white or black colours due to their broadband optical response and robustness to perturbations. Through judicious design, disordered nanostructures have been realised in artificial systems, with unique properties for light localisation, photon transportation and energy harvesting. On the other hand, the tunability of disordered systems with a broadband response has been scarcely explored. Here, we achieve the controlled manipulation of disordered plasmonic systems, realising the transition from broadband absorption to tunable reflection through deterministic control of the coupling to an external cavity. Starting from a generalised model, we realise disordered systems composed of plasmonic nanoclusters that either operate as a broadband absorber or with a reconfigurable reflection band throughout the visible. Not limited to its significance for the further understanding of the physics of disorder, our disordered plasmonic system provides a novel platform for various practical application such as structural colour patterning.
Dimensionality reduction by UMAP to visualize physical and genetic interactions
Authors: Dorrity Michael W. , Saunders Lauren M. , Queitsch Christine , Fields Stanley , Trapnell Cole
Published: March 2020

Dimensionality reduction is often used to visualize complex expression profiling data. Here, we use the Uniform Manifold Approximation and Projection (UMAP) method on published transcript profiles of 1484 single gene deletions of Saccharomyces cerevisiae. Proximity in low-dimensional UMAP space identifies groups of genes that correspond to protein complexes and pathways, and finds novel protein interactions, even within well-characterized complexes. This approach is more sensitive than previous methods and should be broadly useful as additional transcriptome datasets become available for other organisms.
Tools for the performance optimization of single-photon quantum key distribution
Authors: Kupko Timm , von Helversen Martin , Rickert Lucas , Schulze Jan-Hindrik , Strittmatter André , Gschrey Manuel , Rodt Sven , Reitzenstein Stephan , Heindel Tobias
Published: March 2020

Quantum light sources emitting triggered single photons or entangled photon pairs have the potential to boost the performance of quantum key distribution (QKD) systems. Proof-of-principle experiments affirmed these prospects, but further efforts are necessary to push this field beyond its current status. In this work, we show that temporal filtering of single-photon pulses enables a performance optimization of QKD systems implemented with realistic quantum light sources, both in experiment and simulations. To this end, we analyze the influence of temporal filtering of sub-Poissonian single-photon pulses on the expected secret key fraction, the quantum bit error ratio, and the tolerable channel losses. For this purpose, we developed a basic QKD testbed comprising a triggered solid-state single-photon source and a receiver module designed for four-state polarization coding via the BB84 protocol. Furthermore, we demonstrate real-time security monitoring by analyzing the photon statistics, in terms of g(2)(0), inside the quantum channel by correlating the photon flux recorded at the four ports of our receiver. Our findings are useful for the certification of QKD and can be applied and further extended for the optimization of various implementations of quantum communication based on sub-Poissonian quantum light sources, including measurement-device-independent schemes of QKD as well as quantum repeaters. Our work represents an important contribution towards the development of QKD-secured communication networks based on quantum light sources.
The impact of emotion awareness and regulation on psychotic symptoms during daily functioning
Authors: Kimhy David , Lister Amanda , Liu Ying , Vakhrusheva Julia , Delespaul Philippe , Malaspina Dolores , Ospina Luz H. , Mittal Vijay A. , Gross James J. , Wang Yuanjia
Published: March 2020

Emotion regulation (ER) difficulties are ubiquitous among individuals with schizophrenia and have been hypothesized to contribute to stress sensitivity and exacerbation of psychotic symptoms in this population. However, the evidence supporting this link is equivocal, potentially due to previous studies’ reliance on retrospective assessments of ER and psychosis, as well as lack of consideration of putative moderators such as emotion awareness. To address these limitations, we employed experience sampling method using mobile electronic devices to investigate the links between momentary in vivo use of ER strategies (mER), emotion awareness, and psychotic symptoms during daily functioning. Fifty-four individuals with schizophrenia completed assessment of mER and psychotic symptoms, along with traditional retrospective measures of ER and symptoms. Use of mER suppression predicted significant increases in momentary experiences of thought insertion, mind reading, auditory and visual hallucinations. Use of mER reappraisal predicted significant increases in momentary experiences of suspiciousness, thought insertion, and mind reading. Emotion awareness, driven primarily by difficulties identifying feelings, moderated the impact of ER on psychotic symptoms. There were no associations between retrospective measures of ER and symptoms. Our results indicate that, among individuals with schizophrenia, emotion awareness significantly impacts the relationship between use of ER and exacerbations in psychotic symptoms during the course of daily functioning. Our results highlight the need to incorporate emotion awareness and regulation difficulties into the development of treatment models and interventions for psychosis. In addition, our results underscore the need to employ in vivo, high time-resolution assessment methods to study dynamic clinical phenomena such as ER and psychotic symptoms.
Author Correction: Advancing electrodeionization with conductive ionomer binders that immobilize ion-exchange resin particles into porous wafer substrates
Authors: Palakkal Varada Menon , Valentino Lauren , Lei Qi , Kole Subarna , Lin Yupo J. , Arges Christopher G.
Published: March 2020

An amendment to this paper has been published and can be accessed via a link at the top of the paper.
HER2 as a potential biomarker of lymph node metastasis in undifferentiated early gastric cancer
Authors: Han Sanghoon , Park Sungjin , An Jungsuk , Yang Jun-Young , Chung Jun-Won , Kim Yoon Jae , Kim Kyoung Oh , Park Dong Kyun , Kwon Kwang An , Lee Woon Kee , Nam Seungyoon , Kim Jung Ho
Published: March 2020

Human epidermal growth factor receptor 2 (HER2) is implicated in several cancers, including gastric cancer. However, limited data are available regarding its clinical significance in early gastric cancer (EGC). We evaluated the clinical significance of HER2 overexpression in patients with EGC. We retrospectively reviewed 727 patients who underwent surgical treatment for EGC between October 2010 and August 2017. HER2 expression was analysed in 680 EGC cases by immunohistochemistry and classified as negative (0 and 1+), equivocal (2+), or positive [overexpression (3+)]. Among patients with differentiated EGC, the number of patients with HER2 overexpression was not significantly different from that of HER2-negative patients in terms of age, sex, tumour size, location, gross type, depth of invasion, presence of lymphovascular invasion (LVI), and presence of lymph node metastasis (LNM). However, in patients with undifferentiated EGC, HER2 overexpression was significantly correlated with LVI and presence of LNM compared with HER2-negative patients. Multivariate analysis indicated HER2 overexpression as a good predictive marker of LNM in patients with undifferentiated EGC. HER2 expression is associated with LNM in undifferentiated EGC. Therefore, the importance of HER2 overexpression in EGC should not be overlooked, and further studies are needed to identify its clinical significance.
Cholesterol uptake and efflux are impaired in human trophoblast cells from pregnancies with maternal supraphysiological hypercholesterolemia
Authors: Fuenzalida Bárbara , Cantin Claudette , Kallol Sampada , Carvajal Lorena , Pastén Valentina , Contreras-Duarte Susana , Albrecht Christiane , Gutierrez Jaime , Leiva Andrea
Published: March 2020

Maternal physiological (MPH) or supraphysiological hypercholesterolaemia (MSPH) occurs during pregnancy. Cholesterol trafficking from maternal to foetal circulation requires the uptake of maternal LDL and HDL by syncytiotrophoblast and cholesterol efflux from this multinucleated tissue to ApoA-I and HDL. We aimed to determine the effects of MSPH on placental cholesterol trafficking. Placental tissue and primary human trophoblast (PHT) were isolated from pregnant women with total cholesterol <280 md/dL (MPH, n = 27) or ≥280 md/dL (MSPH, n = 28). The lipid profile in umbilical cord blood from MPH and MSPH neonates was similar. The abundance of LDL receptor (LDLR) and HDL receptor (SR-BI) was comparable between MSPH and MPH placentas. However, LDLR was localized mainly in the syncytiotrophoblast surface and was associated with reduced placental levels of its ligand ApoB. In PHT from MSPH, the uptake of LDL and HDL was lower compared to MPH, without changes in LDLR and reduced levels of SR-BI. Regarding cholesterol efflux, in MSPH placentas, the abundance of cholesterol transporter ABCA1 was increased, while ABCG1 and SR-BI were reduced. In PHT from MSPH, the cholesterol efflux to ApoA-I was increased and to HDL was reduced, along with reduced levels of ABCG1, compared to MPH. Inhibition of SR-BI did not change cholesterol efflux in PHT. The TC content in PHT was comparable in MPH and MSPH cells. However, free cholesterol was increased in MSPH cells. We conclude that MSPH alters the trafficking and content of cholesterol in placental trophoblasts, which could be associated with changes in the placenta-mediated maternal-to-foetal cholesterol trafficking.
Polar mesoporous zinc sulfide nanosheets encapsulated in reduced graphene oxide three-dimensional foams for sulfur host
Authors: Mao Limin , Wang Fei , Mao Jian
Published: March 2020

Lithium-sulfur (Li-S) batteries exhibit the high specific capacity and energy density, but prevented by the low coulombic efficiency and weak cycle life. Herein, we fabricate reduced graphene oxide (r-GO) three-dimensional (3D) foams encapsulating polar mesoporous zinc sulfide (ZnS) nanosheets and subsequently utilize the ZnS/r-GO foams to load sulfur (ZnS/r-GO/S) as cathodes for improving the performance of Li-S batteries. The mesoporous diameter of the ZnS nanosheets is approximately 10~30 nm and lots of pores in the 3D foams are observed. The porous structure provides abundant sites to adsorb and accommodate sulfur species. The cathode of the ZnS/r-GO/S exhibits 1259 mA h g−1 of initial capacity and 971.9 mA h g−1 of the reversible capacity after 200 cycles at 0.1 C (1 C = 1675 mA g−1). At 1 C, it still exhibits the tiny capacity decay rate of 0.019% per cycle after 300 cycles. This work may be adopted to combine the nonpolar and polar materials as a 3D network structure for high-performance Li-S batteries.
Extreme summer heat and drought lead to early fruit abortion in European beech
Authors: Nussbaumer Anita , Meusburger Katrin , Schmitt Maria , Waldner Peter , Gehrig Regula , Haeni Matthias , Rigling Andreas , Brunner Ivano , Thimonier Anne
Published: March 2020

Years with high fruit production, known as mast years, are the usual reproduction strategy of European beech. Harsh weather conditions such as frost during flowering can lead to pollination failure in spring. It has been assumed that mast is controlled by flowering, and that after successful pollination, high amounts of fruits and seeds would be produced. However, the extremely hot and dry European summer of 2018 showed that despite successful pollination, beechnuts did not develop or were only abundant in a few forest stands. An in-depth analysis of three forest sites of European beech from the Swiss Long-Term Forest Ecosystem Research Programme over the last 15–19 years revealed for the first time that extreme summer heat and drought can act as an “environmental veto”, leading to early fruit abortion. Within the forest stands in years with fruit abortion, summer mean temperatures were 1.5 °C higher and precipitation sums were 45% lower than the long-term average. Extreme summer heat and drought, together with frost during flowering, are therefore disrupting events of the assumed biennial fruiting cycle in European beech.
Sperm SPACA6 protein is required for mammalian Sperm-Egg Adhesion/Fusion
Authors: Barbaux Sandrine , Ialy-Radio Côme , Chalbi Myriam , Dybal Elisa , Homps-Legrand Méline , Do Cruzeiro Marcio , Vaiman Daniel , Wolf Jean-Philippe , Ziyyat Ahmed
Published: March 2020

Three genes are known to be essential for gamete adhesion/fusion (Cd9, Izumo1 and Juno). Here, we confirmed that Spaca6 null males are infertile and showed that their sperm accumulate in the perivitelline space but are unable to fuse with oocyte. Like IZUMO1, SPACA6 which is expressed by human sperm, is remained on the equatorial segment after acrosomal reaction and is involved in human fertilization since an anti-SPACA6 antibody inhibited it. Despite the similarity of the phenotypes caused by Spaca6 and Izumo1 knockouts, these are not redundant and the essential relocation of IZUMO1 is not affected by the lack of SPACA6. We propose a model in which IZUMO1 and SPACA6 would be part of a molecular complex necessary for gamete fusion and that their concomitant presence would be required for the recruitment of another essential molecular actor, such as a fusogen, for the fusion to take place.
Total Knee Arthroplasty with a Ti6Al4V/PEEK Prosthesis on an Osteoarthritis Rat Model: Behavioral and Neurophysiological Analysis
Authors: Lecocq Mathieu , Linares Jean-Marc , Chaves-Jacob Julien , Coyle Thelma , Roffino Sandrine , Eyraud Marielle , Gigmes Didier , Decherchi Patrick , Dousset Erick
Published: March 2020

Arthroplasty is a surgical procedure to restore the function of the joint of patient suffering from knee osteoarthritis. However, postoperative functional deficits are reported even after a rehabilitation program. In order to determine the origin of functional deficits of patient suffering from knee osteoarthritis and total knee arthroplasty, we developed a rodent model including a chemically-induced-osteoarthritis and designed a knee prosthesis (Ti6Al4V/PEEK) biomechanically and anatomically adapted to rat knee joint. Dynamic Weight-Bearing, gait kinematics, H-reflex from vastus medialis muscle and activities from metabosensitive III and IV afferent fibers in femoral nerve were assessed at 1 and 3 months post-surgery. Results indicate that knee osteoarthritis altered considerably the responses of afferent fibers to their known activators (i.e., lactic acid and potassium chloride) and consequently their ability to modulate the spinal sensorimotor loop, although, paradoxically, motor deficits seemed relatively light. On the contrary, results indicate that, after the total knee arthroplasty, the afferent responses and the sensorimotor function were slightly altered but that motor deficits were more severe. We conclude that neural changes attested by the recovery of the metabosensitive afferent activity and the sensorimotor loop were induced when a total knee replacement was performed and that these changes may disrupt or delay the locomotor recovery.
Temperature but not leptin prevents semi-starvation induced hyperactivity in rats: implications for anorexia nervosa treatment
Authors: Fraga Angela , Carreira Marcos C. , Gonzalez-Izquierdo Andrea , Diéguez Carlos , López Miguel , Gutiérrez Emilio
Published: March 2020

The hypothesis linking hyperactivity with weight loss associated hypoleptinemia in anorexia nervosa gained momentum after a study showing that leptin suppressed semi-starvation induced hyperactivity in rats. Alternatively, ambient temperature is a key modulating factor of activity in semi-starved rats. The aim of the study is to compare the efficacy of leptin with increased ambient temperature in the prevention of hyperactivity in semi-starved rats. 74 Sprague-Dawley male rats were employed in two experiments with the difference residing in the length of baseline. After an extended (28 days), or shorter (14 days) baseline with free access to food and the running wheel, housed at 21 °C, animals were either ad-lib feed or food restricted (60% of food ingested during previous week) and infused with same amount of leptin at 21 °C, 25 °C, or vehicle at 21 °C, 25 °C and 32 °C for a week. Animals housed at 32 °C significantly reduced wheel running and weight loss during food restriction while animals given leptin did not yield no differences in activity or weight loss. Moreover, unlike animals housed at 32 °C, body temperature of leptin infused animals housed at 21 °C was significantly reduced during food restriction. Furthermore, leptin treated rats without a preceding stable pattern of activity displayed a severe dysregulation of circadian rhythm in activity and a collapse of body temperature. Housing temperature plays a more critical role than leptin in the regulation of semi-starvation induced hyperactivity in rats, which may be of relevance for the management of hyperactivity in anorexia nervosa.
Perfluorooctane sulfonate (PFOS) and perfluorooctanoate (PFOA) acutely affect human α1β2γ2L GABAA receptor and spontaneous neuronal network function in vitro
Authors: Tukker Anke M. , Bouwman Lianne M. S. , van Kleef Regina G. D. M. , Hendriks Hester S. , Legler Juliette , Westerink Remco H. S.
Published: March 2020

Concerns about the neurotoxic potential of polyfluoroalkyl substances (PFAS) such as perfluorooctane sulfonate (PFOS) and perfluorooctanoic acid (PFOA) increase, although their neurotoxic mechanisms of action remain debated. Considering the importance of the GABAA receptor in neuronal function, we investigated acute effects of PFAS on this receptor and on spontaneous neuronal network activity. PFOS (Lowest Observed Effect Concentration (LOEC) 0.1 µM) and PFOA (LOEC 1 µM) inhibited the GABA-evoked current and acted as non-competitive human GABAA receptor antagonists. Network activity of rat primary cortical cultures increased following exposure to PFOS (LOEC 100 µM). However, exposure of networks of human induced pluripotent stem cell (hiPSC)-derived neurons decreased neuronal activity. The higher sensitivity of the α1β2γ2L GABAA receptor for PFAS as compared to neuronal networks suggests that PFAS have additional mechanisms of action, or that compensatory mechanisms are at play. Differences between rodent and hiPSC-derived neuronal networks highlight the importance of proper model composition. LOECs for PFAS on GABAA receptor and neuronal activity reported here are within or below the range found in blood levels of occupationally exposed humans. For PFOS, LOECs are even within the range found in human serum and plasma of the general population, suggesting a clear neurotoxic risk.
Stimulation of soluble guanylate cyclase improves donor organ function in rat heart transplantation
Authors: Benke Kálmán , Németh Balázs Tamás , Sayour Alex Ali , Stark Klára Aliz , Oláh Attila , Ruppert Mihály , Szabó Gábor , Korkmaz-Icöz Sevil , Horváth Eszter Mária , Benkő Rita , Hartyánszky István , Szabolcs Zoltán , Merkely Béla , Radovits Tamás
Published: March 2020

Heart transplantation remains the definitive therapy of end-stage heart failure. Ischemia-reperfusion injury occurring during transplantation is a primary determinant of long-term outcome of heart transplantation and primary graft insufficiency. Modification of the nitric oxide/soluble guanylate cyclase/cyclic guanosine monophosphate signaling pathway appears to be one of the most promising among the pharmacological interventional options. We aimed at characterizing the cardio-protective effects of the soluble guanylate cyclase stimulator riociguat in a rat model of heterotopic heart transplantation. Donor Lewis rats were treated orally with either riociguat or placebo for two days (n = 9) in each transplanted group and (n = 7) in donor groups. Following explantation, hearts were heterotopically transplanted. After one hour reperfusion, left ventricular pressure-volume relations and coronary blood flow were recorded. Molecular biological measurements and histological examination were also completed. Left ventricular contractility (systolic pressure: 117 ± 13 vs. 48 ± 5 mmHg, p < 0.001; dP/dtmax: 2963 ± 221 vs. 1653 ± 159 mmHg/s, p < 0.001), active relaxation (dP/dtmin: −2014 ± 305 vs. −1063 ± 177 mmHg/s, p = 0.02; all at 120 µl of left ventricular volume), and alteration of coronary blood flow standardized to heart weight (2.55 ± 0.32 vs. 1.67 ± 0.22 ml/min/g, p = 0.03) were markedly increased following preconditioning with riociguat. Myocardial apoptosis markers were also significantly reduced in the riociguat pretreated group as well as the antioxidant markers were elevated. Pharmacological preconditioning with riociguat decreases ischemia-reperfusion injury and improves donor organ function in our animal model of heart transplantation. Therefore, riociguat might be a potential cardioprotective agent.
Lentiviral Vector Induced Modeling of High-Grade Spinal Cord Glioma in Minipigs
Authors: Tora Muhibullah S. , Texakalidis Pavlos , Neill Stewart , Wetzel Jeremy , Rindler Rima S. , Hardcastle Nathan , Nagarajan Purva P. , Krasnopeyev Andrey , Roach Cristin , James Raphael , Bruce Jeffrey N. , Canoll Peter , Federici Thais , Oshinski John N. , Boulis Nicholas M.
Published: March 2020

Background: Prior studies have applied driver mutations targeting the RTK/RAS/PI3K and p53 pathways to induce the formation of high-grade gliomas in rodent models. In the present study, we report the production of a high-grade spinal cord glioma model in pigs using lentiviral gene transfer. Methods: Six Gottingen Minipigs received thoracolumbar (T14-L1) lateral white matter injections of a combination of lentiviral vectors, expressing platelet-derived growth factor beta (PDGF-B), constitutive HRAS, and shRNA-p53 respectively. All animals received injection of control vectors into the contralateral cord. Animals underwent baseline and endpoint magnetic resonance imaging (MRI) and were evaluated daily for clinical deficits. Hematoxylin and eosin (H&E) and immunohistochemical analysis was conducted. Data are presented using descriptive statistics including relative frequencies, mean, standard deviation, and range. Results: 100% of animals (n = 6/6) developed clinical motor deficits ipsilateral to the oncogenic lentiviral injections by a three-week endpoint. MRI scans at endpoint demonstrated contrast enhancing mass lesions at the site of oncogenic lentiviral injection and not at the site of control injections. Immunohistochemistry demonstrated positive staining for GFAP, Olig2, and a high Ki-67 proliferative index. Histopathologic features demonstrate consistent and reproducible growth of a high-grade glioma in all animals. Conclusions: Lentiviral gene transfer represents a feasible pathway to glioma modeling in higher order species. The present model is the first lentiviral vector induced pig model of high-grade spinal cord glioma and may potentially be used in preclinical therapeutic development programs.
Interaction between steady-state visually evoked potentials at nearby flicker frequencies
Authors: Salelkar Siddhesh , Ray Supratim
Published: March 2020

Steady-state visually evoked potential (SSVEP) studies routinely employ simultaneous presentation of two temporally modulated stimuli, with SSVEP amplitude modulations serving to index top-down cognitive processes. However, the nature of SSVEP amplitude modulations as a function of competing temporal frequency (TF) has not been systematically studied, especially in relation to the normalization framework which has been extensively used to explain visual responses to multiple stimuli. We recorded spikes and local field potential (LFP) from the primary visual cortex (V1) as well as EEG from two awake macaque monkeys while they passively fixated plaid stimuli with components counterphasing at different TFs. We observed asymmetric SSVEP response suppression by competing TFs (greater suppression for lower TFs), which further depended on the relative orientations of plaid components. A tuned normalization model, adapted to SSVEP responses, provided a good account of the suppression. Our results provide new insights into processing of temporally modulated visual stimuli.
Computational design and development of high-performance polymer-composites as new encapsulant material for concentrated PV modules
Authors: Raza Kabeer , Akhtar Syed Sohail , Arif Abul Fazal M. , Hakeem Abbas Saeed
Published: March 2020

A computational design methodology is reported to propose a high-performance composite for backside encapsulation of concentrated photovoltaic (CPV) systems for enhanced module life and electrical power. Initially, potential polymer composite systems that are expected to provide the target properties, such as thermal conductivity, coefficient of thermal expansion, and long-term shear modulus are proposed using in-house built design codes. These codes are based on differential effective medium theory and mean-field homogenization, which lead to the selection of matrix, filler, volume fractions, and type of particulates. Thermoplastic polyurethane (TPU) loaded with ceramics fillers of a minimum spherical diameter of 6 μm are found potential composites. Some representative samples are synthesized through the melt-mixing and compression-molding route and characterized. The target properties including thermal conductivity, coefficient of thermal expansion, viscoelastic parameters, and long-term shear modulus are measured and used to evaluate the performance of CPV modules using previously published finite element model. The proposed composite can drag the cell temperature down by 5.8 °C when compared with neat TPU which leads to a 4.3% increase in electrical power along with a reasonable module life. It is expected that this approach will make a baseline for the effective production of polymer composites in various industrial applications.
Anatomy of a viral entry platform differentially functionalized by integrins α3 and α6
Authors: Finke Jérôme , Mikuličić Snježana , Loster Anna-Lena , Gawlitza Alexander , Florin Luise , Lang Thorsten
Published: March 2020

During cell invasion, human papillomaviruses use large CD151 patches on the cell surface. Here, we studied whether these patches are defined architectures with features for virus binding and/or internalization. Super-resolution microscopy reveals that the patches are assemblies of closely associated nanoclusters of CD151, integrin α3 and integrin α6. Integrin α6 is required for virus attachment and integrin α3 for endocytosis. We propose that CD151 organizes viral entry platforms with different types of integrin clusters for different functionalities. Since numerous viruses use tetraspanin patches, we speculate that this building principle is a blueprint for cell-surface architectures utilized by viral particles.
Spatial and temporal adaptation of predictive saccades based on motion inference
Authors: Itoh Takeshi D. , Takeya Ryuji , Tanaka Masaki
Published: March 2020

Moving objects are often occluded behind larger, stationary objects, but we can easily predict when and where they reappear. Here, we show that the prediction of object reappearance is subject to adaptive learning. When monkeys generated predictive saccades to the location of target reappearance, systematic changes in the location or timing of target reappearance independently altered the endpoint or latency of the saccades. Furthermore, spatial adaptation of predictive saccades did not alter visually triggered reactive saccades, whereas adaptation of reactive saccades altered the metrics of predictive saccades. Our results suggest that the extrapolation of motion trajectory may be subject to spatial and temporal recalibration mechanisms located upstream from the site of reactive saccade adaptation. Repetitive exposure of visual error for saccades induces qualitatively different adaptation, which might be attributable to different regions in the cerebellum that regulate learning of trajectory prediction and saccades.
Electric Field-Modulated Surface Enhanced Raman Spectroscopy by PVDF/Ag Hybrid
Authors: Lu Jiajun , Song Yuzhi , Lei Fengcai , Du Xuejian , Huo Yanyan , Xu Shicai , Li Chonghui , Ning Tingyin , Yu Jing , Zhang Chao
Published: March 2020

Electrically modulated surface enhanced Raman scattering (E-SERS) can be able to regulate the plasmon resonance peak of metal nanostructures, further improve the detection sensitivity of the SERS substrate. However, the E-SERS substrates require auxiliary equipment to provide the electrical potential, and most of them are non-flexible structure, which limits the application of E-SERS in the portable, in-situ and fast detection area. Here, we developed an electric field-modulated SERS substrate based on the piezoelectric effect by combining the PVDF (piezoelectric-modulated layer) and Ag nanowires (AgNWs) (SERS active layer) and investigated the SERS activity in experiment and theory. The enhanced electric field and the tunable plasmon resonance induced by the piezoelectric effect provide the additional enhancement for the SERS signal. Furthermore, we fabricated a SERS active ring with a piezoelectric field-modulated substrate and achieved the in-situ detection of glucose with a non-invasive method. This work provided innovation for the E-SERS and could greatly promote the development of the in-situ, wearable and intelligent sensors.
90-90-90 cascade analysis on reported CLHIV infected by mother-to-child transmission in Guangxi, China: a modeling study
Authors: Wang Gang , Lu Chunyan , Qin Shanfang , Wei Wudi , Lai Jingzhen , Jiang Junjun , Liang Bingyu , Zhou Oulu , Han Jing , Yang Yao , Ye Li , Liang Hao , Ning Chuanyi
Published: March 2020

The prevalence of HIV in Guangxi was very high, and there were many children living with HIV (CLHIV) because of larger baseline of pregnant women infected by HIV. It is necessary for children to explore the status of antiretroviral therapy (ART) on different initial CD4 counts in children with HIV infected by mother-to-child transmission (MTCT) in Guangxi and to evaluate the progress towards the 90-90-90 targets proposed by UNAIDS/WHO. Based on a retrospective observational cohort of children with HIV infected from the Guangxi Center for Disease Prevention and Control (CDC), the variables of all patients included viral loads, CD4 counts, laboratory results and WHO clinical staging of HIV/AIDS were collected. Several indicators were defined before analyzed: (1) diagnosis of MTCT: infants born to HIV-positive mothers who tested positive for HIV twice before 18 months; (2) ART initiation: the children who were enrolled in the treatment cohort and were still having HIV monitoring as of 6 months before date censored and (3) viral suppression: a recently viral load measurement that was less than 1000 copies per milliliter. The number of CLHIV in Guangxi was projected by using the estimates of the national HIV/AIDS prevalence from China CDC. An Autoregressive Integrated Moving Average (ARIMA) model and the Holt Exponential Smoothing (ES) model were used to predict the number of CLHIV, the diagnosed CLHIV, the diagnosed CLHIV receiving ART and the number of them achieving viral suppression, in 2019 and 2021, respectively. In this 14-year HIV/AIDS treatment cohort, 807 children who were HIV infected by MTCT were enrolled. The ARIMA and Holt ES models showed that by the end of 2019, 82.71% of all CLHIV in Guangxi knew their HIV status, 84.50% of those diagnosed had initiated ART, and 85.68% of those on ART had durable viral suppression. By the end of 2021, 93.51% of all CLHIV in Guangxi will know their HIV status, 84.28% of those diagnosed will have initiated antiretroviral therapy, and 85.83% of those on ART will have durable viral suppression. Therefore, in 2021, Guangxi fails to achieve the WHO/UNAIDS 90-90-90 targets for CLHIV, and there is still a wide time interval between the first HIV-positive diagnosis and ART initiation. National free antiretroviral treatment program (NFATP) requires strong enforcement to reduce the prevalence of later chronic diseases and complications.
Effect of faba bean-based diets on the meat quality and fatty acids composition in breast muscles of broiler chickens
Authors: Kuźniacka Joanna , Banaszak Mirosław , Biesek Jakub , Maiorano Giuseppe , Adamski Marek
Published: March 2020

The aim of the study was to evaluate the effect of feed containing faba bean on the physicochemical properties of breast and leg muscles. The study was conducted on 340 Ross 308 broiler chickens reared for 6 weeks. The control group received feed based on soybean meal. The treatment group received a feed mixture with faba bean as the source of protein. Different sources of protein in the diet were also associated with changes in the content of n-6 fatty acids (C16:0, C22:4) and the n-6/n-3 ratio in breast muscles, which was higher (P < 0.05) in treatment group. The collagen content was higher (P < 0.05) in breast muscles from control group. The study revealed that the use of faba bean as a substitute for soybean meal had no significant effect (P > 0.05) on water holding capacity, drip loss, or major chemical components of breast and leg muscles. The P/S ratio, AI and TI, and the content of cholesterol in breast muscles were comparable (P > 0.05) in both groups. The values of lightness (L*) for leg muscles were lower (P < 0.05) in treatment group. The use of faba bean instead to soybean meal in diets for broiler chickens had positive effects on meat quality traits.
Rhizosphere assisted biodegradation of benzo(a)pyrene by cadmium resistant plant-probiotic Serratia marcescens S2I7, and its genomic traits
Authors: Kotoky Rhitu , Pandey Piyush
Published: March 2020

Melia azedarach-rhizosphere mediated degradation of benzo(a)pyrene (BaP), in the presence of cadmium (Cd) was studied, using efficient rhizobacterial isolate. Serratia marcescens S2I7, isolated from the petroleum-contaminated site, was able to tolerate up to 3.25 mM Cd. In the presence of Cd, the isolate S2I7 exhibited an increase in the activity of stress-responsive enzyme, glutathione-S-transferase. Gas Chromatography-Mass spectroscopy analysis revealed up to 59% in -vitro degradation of BaP after 21 days, while in the presence of Cd, the degradation was decreased by 14%. The bacterial isolate showed excellent plant growth-promoting attributes and could enhance the growth of host plant in Cd contaminated soil. The 52,41,555 bp genome of isolate S. marcescens S2I7 was sequenced, assembled and annotated into 4694 genes. Among these, 89 genes were identified for the metabolism of aromatic compounds and 172 genes for metal resistance, including the efflux pump system. A 2 MB segment of the genome was identified to contain operons for protocatechuate degradation, catechol degradation, benzoate degradation, and an IclR type regulatory protein pcaR, reported to be involved in the regulation of protocatechuate degradation. A pot trial was performed to validate the ability of S2I7 for rhizodegradation of BaP when applied through Melia azedarach rhizosphere. The rhizodegradation of BaP was significantly higher when augmented with S2I7 (85%) than degradation in bulk soil (68%), but decreased in the presence of Cd (71%).
Comparison of perioperative outcomes between pure laparoscopic surgery and open right hepatectomy in living donor hepatectomy: Propensity score matching analysis
Authors: Jeong Ji Seon , Wi Wongook , Chung Yoon Joo , Kim Jong Man , Choi Gyu-Seong , Kwon Choon Hyuck David , Han Sangbin , Gwak Mi Sook , Kim Gaab Soo , Ko Justin Sangwook
Published: March 2020

Pure laparoscopic donor right hepatectomy (PLDRH) is not a standard procedure for living donor liver transplantation but is safe and reproducible in the hands of experienced surgeons. However, the perioperative outcomes of PLDRH have not been fully evaluated yet. We used propensity score matching to compare the perioperative complications and postoperative short-term outcomes of donors undergoing PLDRH and open donor right hepatectomy (ODRH). A total of 325 consecutive donors who underwent elective, adult-to-adult right hepatectomy were initially screened. After propensity score matching, all patients were divided into two groups: PLDRH (n = 123) and ODRH (n = 123) groups. Perioperative complications and postoperative outcomes were compared between the two groups. Postoperative pulmonary complications were significantly more common in the ODRH than in the PLDRH group (54.5 vs. 31.7%, P < 0.001). The biliary complications (leak and stricture) were higher in PLDRH group than in the ODRH group (8% vs. 3%), but it failed to reach statistical significance (P = 0.167). Overall, surgical complication rates were similar between the two groups (P = 0.730). The opioid requirement during the first 7 postoperative days was higher in the ODRH group (686 vs. 568 mg, P < 0.001). The hospital stay and time to the first meal were shorter in the PLDRH than in the ODRH group (P = 0.003 and P < 0.001, respectively). PLDRH reduced the incidence of postoperative pulmonary complications and afforded better short-term postoperative outcomes compared to ODRH. However, surgical complication rates were similar in both groups.
GIS-based modelling reveals the fate of antlion habitats in the Deliblato Sands
Authors: Ivajnšič Danijel , Devetak Dušan
Published: March 2020

The Deliblato Sands Special Nature Reserve (DSSNR; Vojvodina, Serbia) is facing a fast successional process. Open sand steppe habitats, considered as regional biodiversity hotspots, have drastically decreased over the last 25 years. This study combines multi-temporal and –spectral remotely sensed data, in-situ sampling techniques and geospatial modelling procedures to estimate and predict the potential development of open habitats and their biota from the perspective of antlions (Neuroptera, Myrmeleontidae). It was confirmed that vegetation density increased in all parts of the study area between 1992 and 2017. Climate change, manifested in the mean annual precipitation amount, significantly contributes to the speed of succession that could be completed within a 50-year period. Open grassland habitats could reach an alarming fragmentation rate by 2075 (covering 50 times less area than today), according to selected global climate models and emission scenarios (RCP4.5 and RCP8.5). However, M. trigrammus could probably survive in the DSSNR until the first half of the century, but its subsequent fate is very uncertain. The information provided in this study can serve for effective management of sand steppes, and antlions should be considered important indicators for conservation monitoring and planning.
Influence of Substrate in Roll-to-roll Coated Nanographite Electrodes for Metal-free Supercapacitors
Authors: Blomquist Nicklas , Koppolu Rajesh , Dahlström Christina , Toivakka Martti , Olin Håkan
Published: March 2020

Due to the high electric conductivity and large surface area of nanographites, such as graphene and graphite nanoplatlets, these materials have gained a large interest for use in energy storage devices. However, due to the thin flake geometry, the viscosity of aqueous suspensions containing these materials is high even at low solids contents. This together with the use of high viscosity bio-based binders makes it challenging to coat in a roll-to-roll process with sufficient coating thickness. Electrode materials for commercial energy storage devices are often suspended by organic solvents at high solids contents and coated onto metal foils used as current-collectors. Another interesting approach is to coat the electrode onto the separator, to enable large-scale production of flat cell stacks. Here, we demonstrate an alternative, water-based approach that utilize slot-die coating to coat aqueous nanographite suspension with nanocellulose binder onto the paper separator, and onto the current collector as reference, in aqueous metal-free supercapacitors. The results show that the difference in device equivalent series resistance (ESR) due to interfacial resistance between electrode and current collector was much lower than expected and thus similar or lower compared to other studies with a aqueous supercapacitors. This indicates that electrode coated paper separator substrates could be a promising approach and a possible route for manufacturing of low-cost, environmentally friendly and metal-free energy storage devices.
Pilot study of eruption forecasting with muography using convolutional neural network
Authors: Nomura Yukihiro , Nemoto Mitsutaka , Hayashi Naoto , Hanaoka Shouhei , Murata Masaki , Yoshikawa Takeharu , Masutani Yoshitaka , Maeda Eriko , Abe Osamu , Tanaka Hiroyuki K. M.
Published: March 2020

Muography is a novel method of visualizing the internal structures of active volcanoes by using high-energy near-horizontally arriving cosmic muons. The purpose of this study is to show the feasibility of muography to forecast the eruption event with the aid of the convolutional neural network (CNN). In this study, seven daily consecutive muographic images were fed into the CNN to compute the probability of eruptions on the eighth day, and our CNN model was trained by hyperparameter tuning with the Bayesian optimization algorithm. By using the data acquired in Sakurajima volcano, Japan, as an example, the forecasting performance achieved a value of 0.726 for the area under the receiver operating characteristic curve, showing the reasonable correlation between the muographic images and eruption events. Our result suggests that muography has the potential for eruption forecasting of volcanoes.