bluuebunny/crossref_metadata_2025 huggingface dataset:
Analysis of the Stiffness Ratio at the Interim Layer of Frame-Supported Multi-Ribbed Lightweight Walls under Low-Reversed Cyclic Loading
Authors: Jia Suizi , Cao Wanlin , Zhang Yuchen , Yuan Quan
Published: January 2016

By conducting low-reversed cyclic loading tests, this paper explores the load-bearing performance of frame-supported multi-ribbed lightweight wall structures. The finite-element software (OpenSees) is used to simulate the process with the shear wall width (at the frame-supported layer) and different hole opening approaches (for multi-ribbed lightweight walls) as variables. The conclusions reflect the influence of the stiffness ratio at the interim layer on the load-bearing performance of the structure. On this basis, the paper identifies the preferable numerical range for engineering design, which provides a solid foundation for the theoretical advancement of the structures in this study.
Evaluation of High-Speed Railway Bridges Based on a Nondestructive Monitoring System
Authors: Kaloop Mosbeh , Hu Jong , Elbeltagi Emad
Published: January 2016

Recently, trains’ velocities in Korea increased more than the speed used in the design of some bridges. Accordingly, this paper demonstrates the evaluation of a railway bridge due to high-speed trains’ movement. A nondestructive monitoring system is used to assess the bridge performance under train speeds of 290, 360, 400 and 406 km/h. This system is comprised of a wireless short-term acceleration system and strain monitoring sensors attached to the bridge girder. The results of the analytical methods in time and frequency domains are presented. The following conclusions are obtained: the cross-correlation models for accelerations and strain measurements are effective to predict the performance of the bridge; the static behavior is increased with train speed developments; and the vibration, torsion, fatigue and frequency contents analyses of the bridge show that the bridge is safe under applied trains’ speeds.
Sensory Description of Cultivars (Coffea Arabica L.) Resistant to Rust and Its Correlation with Caffeine, Trigonelline, and Chlorogenic Acid Compounds
Authors: De Oliveira Fassio Larissa , Malta Marcelo , Carvalho Gladyston , Liska Gilberto , De Lima Priscilla , Pimenta Carlos
Published: January 2016

Considering the importance of the chemical compounds in Arabica coffee beans in the definition of the drink sensory quality and authentication of coffee regions, the aim of this study was to evaluate, from principal component analysis—PCA—if there is a relation between the caffeine, trigonelline, and chlorogenic acid (5-CQA) content and the sensory attributes of the drink, and in this context, enabling the differentiation of cultivars in two coffee-producing regions of Brazil. We evaluated seven rust-resistant Coffea arabica cultivars, and two rust-susceptible cultivars in two cultivation environments: Lavras, in the southern region of Minas Gerais state, and Patrocinio in the Cerrado region of Minas Gerais. The flavor and acidity were determinant for differentiation of the cultivars and their interaction with the evaluated environments. Cultivars Araponga MG1, Catigua MG2, and Catigua MG1 are the most suitable for the production of specialty coffee in the state of Minas Gerais. A poor correlation was found between caffeine, trigonelline, 5-CQA contents, and fragrance, flavor, acidity, body, and final score attributes. However, these compounds enabled the differentiation of the environments. The PCA indicated superiority in the sensory quality of cultivars resistant to rust, compared to the control, Bourbon Amarelo, and Topázio MG1190.
Cancer-Cells on Chip for Label-Free Detection of Secreted Molecules
Authors: Berthuy Ophélie , Blum Loïc , Marquette Christophe
Published: January 2016

In the present report, we are making the proof of concept of cell small populations (from 1 to 100 cells) spotting, culture and secretion detection on a gold surface. In order to keep the cells in a hydrated environment during the robotized micropipetting and to address different cell lines on a single chip, a biocompatible alginate polymer was used. This approach enables the encapsulation of the cell in a very small volume (30 nL), directly on the substrate and permits a precise control of the number of cells in each alginate bead. After 24 h of culture, the adherent cells are ready for surface plasmon resonance imaging (SPRi) experimentation. To enable the detection of secreted proteins, various antibodies are immobilized in an organized manner on a SPRi sensor and permitted the multiplex detection of different proteins secreted by the different cultured cell lines. Evidence of the real-time detection will be presented for Prostate Specific Antigen (PSA) and β-2-microglobulin (B2M) secreted by prostate cancer cells following induction by dihydrotestosterone (DHT). Different kinetics for the two secreted proteins were then demonstrated and precisely determined using the chip.
Updates in Therapy for Advanced Melanoma
Authors: Singh Bhavana , Salama April
Published: January 2016

Cutaneous melanoma is one of the most aggressive forms of skin cancer, and is correlated with a large proportion of skin cancer-related deaths. Therapy for cutaneous melanoma has advanced greatly through careful identification of therapeutic targets and the development of novel immunotherapeutic approaches. The identification of BRAF as well as other driver mutations, have allowed for a specialized approach to treatment. In addition, immune checkpoint inhibition has dramatically changed the treatment landscape over the past 5–10 years. The successful targeting of CTLA-4, as well as PD-1/PD-L1, has been translated into meaningful clinical benefit for patients, with multiple other potential agents in development. Systemic therapy for cutaneous melanoma is becoming more nuanced and often takes a multifaceted strategy. This review aims to discuss the benefits and limitations of current therapies in systemic melanoma treatment as well as areas of future development.
Skin Redox Balance Maintenance: The Need for an Nrf2-Activator Delivery System
Authors: Ben-Yehuda Greenwald Maya , Ben-Sasson Shmuel , Bianco-Peled Havazelet , Kohen Ron
Published: January 2016

The skin, being the largest organ of the body, functions as a barrier between our body and the environment. It is consistently exposed to various exogenous and endogenous stressors (e.g., air pollutants, ionizing and non-ionizing irradiation, toxins, mitochondrial metabolism, enzyme activity, inflammatory process, etc.) producing reactive oxygen species (ROS) and physical damage (e.g., wounds, sunburns) also resulting in reactive oxygen species production. Although skin is equipped with an array of defense mechanisms to counteract reactive oxygen species, augmented exposure and continued reactive oxygen species might result in excessive oxidative stress leading to many skin disorders including inflammatory diseases, pigmenting disorders and some types of cutaneous malignancy. The nuclear factor erythroid 2-related factor 2 (Nrf2) is an emerging regulator of cellular resistance and of defensive enzymes such as the phase II enzymes. Induction of the Keap1–Nrf2 pathway may have a beneficial effect in the treatment of a large number of skin disorders by stimulating an endogenous defense mechanism. However, prolonged and enhanced activation of this pathway is detrimental and, thus, limits the therapeutic potential of Keap1–Nrf2 modulators. Here, we review the consequences of oxidative stress to the skin, and the defense mechanisms that skin is equipped with. We describe the challenges of maintaining skin redox balance and its impact on skin status and function. Finally, we suggest a novel strategy for maintenance of skin redox homeostasis by modulating the Keap1–Nrf2 pathway using nanotechnology-based delivery systems.
Entropy Generation Results of Convenience But without Purposeful Analysis and Due Comprehension—Guidelines for Authors
Authors: Kostic Milivoje
Published: January 2016

There is a growing trend in recently-submitted manuscripts and publications to present calculated results of entropy generation, also known as entropy production, as field quantities in a system or device control volume, based on prior calculation of velocity and temperature fields, frequently using CFD numerical methods. [...]
Using Multidimensional ADTPE and SVM for Optical Modulation Real-Time Recognition
Authors: Wei Junyu , Huang Zhiping , Su Shaojing , Zuo Zhen
Published: January 2016

Based on the feature extraction of multidimensional asynchronous delay-tap plot entropy (ADTPE) and multiclass classification of support vector machine (SVM), we propose a method for recognition of multiple optical modulation formats and various data rates. We firstly present the algorithm of multidimensional ADTPE, which is extracted from asynchronous delay sampling pairs of modulated optical signal. Then, a multiclass SVM is utilized for fast and accurate classification of several widely-used optical modulation formats. In addition, a simple real-time recognition scheme is designed to reduce the computation time. Compared to the existing method based on asynchronous delay-tap plot (ADTP), the theoretical analysis and simulation results show that our recognition method can effectively enhance the tolerance of transmission impairments, obtaining relatively high accuracy. Finally, it is further demonstrated that the proposed method can be integrated in an optical transport network (OTN) with flexible expansion. Through simply adding the corresponding sub-SVM module in the digital signal processer (DSP), arbitrary new modulation formats can be recognized with high recognition accuracy in a short response time.
Hardware Activation by Means of PUFs and Elliptic Curve Cryptography in Field-Programmable Devices
Authors: Parrilla Luis , Castillo Encarnación , Morales Diego , García Antonio
Published: January 2016

Reusable design using IP cores requires of efficient methods for protecting the Intellectual Property of the designer and the corresponding license agreements. In this work, a new protection procedure establishing an activation protocol in a similar way to the activation process in the software world is presented. The procedure, named SEHAS (Secure Hardware Activation System) allows the distribution of cores in either Blocked (not functioning) or Demo (functioning with limited features) modes, while ensuring the license agreements by identifying not only the IP core but also the implementation device, using Physically Unclonable Functions (PUF). Moreover, SEHAS secures the exchange of information between the core and the core vendor using an Elliptic Curve Cryptosystem (ECC). This secure channel allows the IP core vendor to send a unique Activation Code to the core in order to switch it to the Activated Mode, thus enabling all its features.
Two-Dimensional Simulation of Mass Transfer in Unitized Regenerative Fuel Cells under Operation Mode Switching
Authors: Wang Lulu , Guo Hang , Ye Fang , Ma Chongfang
Published: January 2016

A two-dimensional, single-phase, isothermal, multicomponent, transient model is built to investigate the transport phenomena in unitized regenerative fuel cells (URFCs) under the condition of switching from the fuel cell (FC) mode to the water electrolysis (WE) mode. The model is coupled with an electrochemical reaction. The proton exchange membrane (PEM) is selected as the solid electrolyte of the URFC. The work is motivated by the need to elucidate the complex mass transfer and electrochemical process under operation mode switching in order to improve the performance of PEM URFC. A set of governing equations, including conservation of mass, momentum, species, and charge, are considered. These equations are solved by the finite element method. The simulation results indicate the distributions of hydrogen, oxygen, water mass fraction, and electrolyte potential response to the transient phenomena via saltation under operation mode switching. The hydrogen mass fraction gradients are smaller than the oxygen mass fraction gradients. The average mass fractions of the reactants (oxygen and hydrogen) and product (water) exhibit evident differences between each layer in the steady state of the FC mode. By contrast, the average mass fractions of the reactant (water) and products (oxygen and hydrogen) exhibit only slight differences between each layer in the steady state of the WE mode. Under either the FC mode or the WE mode, the duration of the transient state is only approximately 0.2 s.
Power Generation from Concentration Gradient by Reverse Electrodialysis in Dense Silica Membranes for Microfluidic and Nanofluidic Systems
Authors: Lee Sang , Kim Hyun , Kim Dong-Kwon
Published: January 2016

In this study, we investigate power generation by reverse electrodialysis in a dense silica membrane that is between two NaCl solutions with various combinations of concentrations. Each silica membrane is fabricated by depositing a silica layer on a porous alumina substrate via chemical vapor deposition. The measured potential-current (V-I) characteristics of the silica membrane are used to obtain the transference number, diffusion potential, and electrical resistance. We develop empirical correlations for the transference number and the area-specific resistance, and present the results of power generation by reverse electrodialysis using the fabricated silica membranes. The highest measured power density is 0.98 mW/m2. In addition, we develop a contour map of the power density as a function of NaCl concentrations on the basis of the empirical correlations. The contour map shows that a power output density of 1.2 mW/m2 is achievable with the use of silica membranes and is sufficient to drive nanofluidic and microfluidic systems. The dense silica membrane has the potential for use in micro power generators in nanofluidic and microfluidic systems.
A Lithium-Ion Battery Simulator Based on a Diffusion and Switching Overpotential Hybrid Model for Dynamic Discharging Behavior and Runtime Predictions
Authors: Dung Lan-Rong , Yuan Hsiang-Fu , Yen Jieh-Hwang , She Chien-Hua , Lee Ming-Han
Published: January 2016

A new battery simulator based on a hybrid model is proposed in this paper for dynamic discharging behavior and runtime predictions in existing electronic simulation environments, e.g., PSIM, so it can help power circuit designers to develop and optimize their battery-powered electronic systems. The hybrid battery model combines a diffusion model and a switching overpotential model, which automatically switches overpotential resistance mode or overpotential voltage mode to accurately describe the voltage difference between battery electro-motive force (EMF) and terminal voltage. Therefore, this simulator can simply run in an electronic simulation software with less computational efforts and estimate battery performances by further considering nonlinear capacity effects. A linear extrapolation technique is adopted for extracting model parameters from constant current discharging tests, so the EMF hysteresis problem is avoided. For model validation, experiments and simulations in MATLAB and PSIM environments are conducted with six different profiles, including constant loads, an interrupted load, increasing and decreasing loads and a varying load. The results confirm the usefulness and accuracy of the proposed simulator. The behavior and runtime prediction errors can be as low as 3.1% and 1.2%, respectively.
Synthesis and New Observations on Needle Pathogens of Larch in Northern Finland
Authors: Jalkanen Risto
Published: January 2016

Needle pathogens of larch (Larix spp.) in the Nordic countries are under-studied. Their incidence in Finland tends to be low and local, and this may be a function of enemy release, since species of larch were introduced to the region. Here, the ecology and incidence of larch needle pathogens and the abiotic factors that also affect larch in northern Finland are reviewed. Field observations and related laboratory analyses during the past 35 years have mainly been obtained near the Kivalo Research Area within the Arctic Circle, Finnish Lapland. The relatively recent introduction of Hypodermella laricis is a primary focus. This pathogen is not only new to Nordic countries, but can cause severe outbreaks, defoliation and crown-thinning in the canopies of all ages of most planted larch species worldwide. Symptoms of H. laricis clearly differ from those of Mycosphaerella laricina; the latter has affected Larix sibirica at high latitudes for decades. The effects of Meria laricis, Lophodermium laricinum, various rust fungi, and wind and frost are also discussed.
Long-Term Monitoring of Field Trial Sites with Genetically Modified Oilseed Rape (Brassica napus L.) in Saxony-Anhalt, Germany. Fifteen Years Persistence to Date but No Spatial Dispersion
Authors: Belter Anke
Published: January 2016

Oilseed rape is known to persist in arable fields because of its ability to develop secondary seed dormancy in certain agronomic and environmental conditions. If conditions change, rapeseeds are able to germinate up to 10 years later to build volunteers in ensuing crops. Extrapolations of experimental data acted on the assumption of persistence periods for more than 20 years after last harvest of rapeseed. Genetically-modified oilseed rape—cultivated widely in Northern America since 1996—is assumed not to differ from its conventional form in this property. Here, experimental data are reported from official monitoring activities that verify these assumptions. At two former field trial sites in Saxony-Anhalt genetically-modified herbicide-resistant oilseed rape volunteers are found up to fifteen years after harvest. Nevertheless, spatial dispersion or establishment of GM plants outside of the field sites was not observed within this period.
Built Environment Influences of Children’s Physical Activity: Examining Differences by Neighbourhood Size and Sex
Authors: Mitchell Christine , Clark Andrew , Gilliland Jason
Published: January 2016

Neighbourhoods can facilitate or constrain moderate-to-vigorous physical activity (MVPA) among children by providing or restricting opportunities for MVPA. However, there is no consensus on how to define a child’s neighbourhood. This study examines the influence of the neighbourhood built environment on objectively measured MVPA among 435 children (aged 9–14 years) in London (ON, Canada). As there is no consensus on how to delineate a child’s neighbourhood, a geographic information system was used to generate measures of the neighbourhood built environment at two buffer sizes (500 m and 800 m) around each child’s home. Linear regression models with robust standard errors (cluster) were used to analyze the relationship between built environment characteristics and average daily MVPA during non-school hours on weekdays. Sex-stratified models assessed sex-specific relationships. When accounting for individual and neighbourhood socio-demographic variables, park space and multi-use path space were found to influence children’s MVPA. Sex-stratified models found significant associations between MVPA and park space, with the 800 m buffer best explaining boys’ MVPA and the 500 m buffer best explaining girls’ MVPA. Findings emphasize that, when designing built environments, programs, and policies to facilitate physical activity, it is important to consider that the size of the neighbourhood influencing a child’s physical activity may differ according to sex.
Spatiotemporal Pattern Analysis of Scarlet Fever Incidence in Beijing, China, 2005–2014
Authors: Mahara Gehendra , Wang Chao , Huo Da , Xu Qin , Huang Fangfang , Tao Lixin , Guo Jin , Cao Kai , Long Liu , Chhetri Jagadish , Gao Qi , Wang Wei , Wang Quanyi , Guo Xiuhua
Published: January 2016

Objective: To probe the spatiotemporal patterns of the incidence of scarlet fever in Beijing, China, from 2005 to 2014. Methods: A spatiotemporal analysis was conducted at the district/county level in the Beijing region based on the reported cases of scarlet fever during the study period. Moran’s autocorrelation coefficient was used to examine the spatial autocorrelation of scarlet fever, whereas the Getis-Ord Gi* statistic was used to determine the hotspot incidence of scarlet fever. Likewise, the space-time scan statistic was used to detect the space-time clusters, including the relative risk of scarlet fever incidence across all settings. Results: A total of 26,860 scarlet fever cases were reported in Beijing during the study period (2005–2014). The average annual incidence of scarlet fever was 14.25 per 100,000 population (range, 6.76 to 32.03 per 100,000). The incidence among males was higher than that among females, and more than two-thirds of scarlet fever cases (83.8%) were among children 3–8 years old. The seasonal incidence peaks occurred from March to July. A higher relative risk area was mainly in the city and urban districts of Beijing. The most likely space-time clusters and secondary clusters were detected to be diversely distributed in every study year. Conclusions: The spatiotemporal patterns of scarlet fever were relatively unsteady in Beijing from 2005 to 2014. The at-risk population was mainly scattered in urban settings and dense districts with high population, indicating a positive relationship between population density and increased risk of scarlet fever exposure. Children under 15 years of age were the most susceptible to scarlet fever.
Chronic Arsenic Poisoning Probably Caused by Arsenic-Based Pesticides: Findings from an Investigation Study of a Household
Authors: Li Yongfang , Ye Feng , Wang Anwei , Wang Da , Yang Boyi , Zheng Quanmei , Sun Guifan , Gao Xinghua
Published: January 2016

In addition to naturally occurring arsenic, man-made arsenic-based compounds are other sources of arsenic exposure. In 2013, our group identified 12 suspected arsenicosis patients in a household (32 living members). Of them, eight members were diagnosed with skin cancer. Interestingly, all of these patients had lived in the household prior to 1989. An investigation revealed that approximately 2 tons of arsenic-based pesticides had been previously placed near a well that had supplied drinking water to the family from 1973 to 1989. The current arsenic level in the well water was 620 μg/L. No other high arsenic wells were found near the family’s residence. Based on these findings, it is possible to infer that the skin lesions exhibited by these family members were caused by long-term exposure to well water contaminated with arsenic-based pesticides. Additionally, biochemical analysis showed that the individuals exposed to arsenic had higher levels of aspartate aminotransferase and γ-glutamyl transpeptidase than those who were not exposed. These findings might indicate the presence of liver dysfunction in the arsenic-exposed individuals. This report elucidates the effects of arsenical compounds on the occurrence of high levels of arsenic in the environment and emphasizes the severe human health impact of arsenic exposure.
An Assessment of Radiological Hazards from Gold Mine Tailings in the Province of Gauteng in South Africa
Authors: Kamunda Caspah , Mathuthu Manny , Madhuku Morgan
Published: January 2016

Radiological hazards associated with exposure to Naturally Occurring Radionuclides Materials from gold mine tailings in the province of Gauteng in South Africa were evaluated. A comparison was made with soil samples from a control area. In this study, gamma spectroscopy was used to measure the activity concentrations of these radionuclides in 56 soil samples from the mine tailings and 10 soil samples from the control area. The average activity concentrations in Bq∙kg−1 for Uranium-238, Thorium-232, and Potassium-40 from the mine tailings were found to be 785.3 ± 13.7, 43.9 ± 1.0 and 427.0 ± 13.1, respectively. On the other hand, the average activity concentrations in Bq∙kg−1 for Uranium-238, Thorium-232, and Potassium-40 from the control area were found to be 17.0.1 ± 0.4, 22.2 ± 0.5 and 496.8 ± 15.2, respectively. Radiological hazard parameters calculated from these activity concentrations were higher than recommended safe limits. In particular, calculated average values for the external hazard (Hex) and the internal hazard (Hin) from the mine tailings were found to be 2.4 and 4.5. Both these values were higher than unity, posing a significant health risk to the population in the area.
Morphological and Cellular Features of Innate Immune Reaction in Helicobacter pylori Gastritis: A Brief Review
Authors: Ieni Antonio , Barresi Valeria , Rigoli Luciana , Fedele Francesco , Tuccari Giovanni , Caruso Rosario
Published: January 2016

Innate and adaptive immunity are both involved in acute and chronic inflammatory processes. The main cellular players in the innate immune system are macrophages, mast cells, dendritic cells, neutrophils, eosinophils, and natural killer (NK), which offer antigen-independent defense against infection. Helicobacter pylori (H. pylori) infection presents peculiar characteristics in gastric mucosa infrequently occurring in other organs; its gastric colonization determines a causal role in both gastric carcinomas and mucosa-associated lymphoid tissue lymphoma. In contrast, an active role for Epstein-Barr virus (EBV) has been identified only in 9% of gastric carcinomas. The aim of the present review is to discuss the role of cellular morphological effectors in innate immunity during H. pylori infection and gastric carcinogenesis.
Herb-Induced Liver Injury in the Berlin Case-Control Surveillance Study
Authors: Douros Antonios , Bronder Elisabeth , Andersohn Frank , Klimpel Andreas , Kreutz Reinhold , Garbe Edeltraut , Bolbrinker Juliane
Published: January 2016

Herb-induced liver injury (HILI) has recently attracted attention due to increasing reports of hepatotoxicity associated with use of phytotherapeutics. Here, we present data on HILI from the Berlin Case-Control Surveillance Study. The study was initiated in 2000 to investigate the serious toxicity of drugs including herbal medicines. Potential cases of liver injury were ascertained in more than 180 Departments of all 51 Berlin hospitals from October 2002 to December 2011. Drug or herb intake was assessed through a standardized face-to-face interview. Drug or herbal aetiology was assessed based on the updated Council for International Organizations of Medical Sciences scale. In ten of all 198 cases of hepatotoxicity included in the study, herbal aetiology was assessed as probable (once ayurvedic herb) or possible (Valeriana five times, Mentha piperita once, Pelargonium sidoides once, Hypericum perforatum once, Eucalyptus globulus once). Mean age was 56.4 ± 9.7 years, and the predominant pattern of liver injury was hepatocellular. No cases of acute liver failure or death were observed. This case series corroborates known risks for ayurvedic herbs, supports the suspected association between Valeriana use and liver injury, and indicates a hepatotoxic potential for herbs such as Pelargonium sidoides, Hypericum perforatum or Mentha piperita that were rarely associated with liver injury before. However, given that possible causality does not prove clinical significance, further studies in this field are needed.
Cerebellar Expression of the Neurotrophin Receptor p75 in Naked-Ataxia Mutant Mouse
Authors: Rahimi Balaei Maryam , Jiao Xiaodan , Ashtari Niloufar , Afsharinezhad Pegah , Ghavami Saeid , Marzban Hassan
Published: January 2016

Spontaneous mutation in the lysosomal acid phosphatase 2 (Acp2) mouse (nax—naked-ataxia mutant mouse) correlates with severe cerebellar defects including ataxia, reduced size and abnormal lobulation as well as Purkinje cell (Pc) degeneration. Loss of Pcs in the nax cerebellum is compartmentalized and harmonized to the classic pattern of gene expression of the cerebellum in the wild type mouse. Usually, degeneration starts in the anterior and posterior zones and continues to the central and nodular zones of cerebellum. Studies have suggested that the p75 neurotrophin receptor (NTR) plays a role in Pc degeneration; thus, in this study, we investigated the p75NTR pattern and protein expression in the cerebellum of the nax mutant mouse. Despite massive Pc degeneration that was observed in the nax mouse cerebellum, p75NTR pattern expression was similar to the HSP25 pattern in nax mice and comparable with wild type sibling cerebellum. In addition, immunoblot analysis of p75NTR protein expression did not show any significant difference between nax and wild type sibling (p > 0.5). In comparison with wild type counterparts, p75NTR pattern expression is aligned with the fundamental cytoarchitecture organization of the cerebellum and is unchanged in the nax mouse cerebellum despite the severe neurodevelopmental disorder accompanied with Pc degeneration.
Cloning and Transcriptional Activity of the Mouse Omi/HtrA2 Gene Promoter
Authors: Liu Dan , Liu Xin , Wu Ye , Wang Wen , Ma Xinliang , Liu Huirong
Published: January 2016

HtrA serine peptidase 2 (HtrA2), also named Omi, is a pro-apoptotic protein that exhibits dramatic changes in expression levels in a variety of disorders, including ischemia/reperfusion injury, cancer, and neurodegeneration. In our study, Omi/HtrA2 protein levels were high in the heart, brain, kidney and liver, with elevated heart/brain expression in aging mice. A similar expression pattern was observed at the mRNA level, which suggests that the regulation of Omi/HtrA2 is predominately transcriptional. Promoter binding by transcription factors is the main influencing factor of transcription, and to identify specific promoter elements that contribute to the differential expression of mouse Omi/HtrA2, we constructed truncated Omi/HtrA2 promoter/luciferase reporter vectors and analyzed their relative luciferase activity; it was greatest in the promoter regions at −1205~−838 bp and −146~+93 bp, with the −838~−649 bp region exhibiting negative regulatory activity. Bioinformatics analysis suggested that the Omi/HtrA2 gene promoter contains a CpG island at −709~+37 bp, and eight heat shock transcription factor 1 (HSF1) sites, two Sp1 transcription factor (SP1)sites, one activator protein (AP) site, seven p53 sites, and four YY1 transcription factor(YY1) sites were predicted in the core areas. Furthermore, we found that p53 and HSF1 specifically binds to the Omi/HtrA2 promoter using chromatin immunoprecipitation analysis. These results provide a foundation for understanding Omi/HtrA2 regulatory mechanisms, which could further understanding of HtrA-associated diseases.
A Technique for Improving Lifetime of Non-Volatile Caches Using Write-Minimization
Authors: Mittal Sparsh , Vetter Jeffrey
Published: January 2016

While non-volatile memories (NVMs) provide high-density and low-leakage, they also have low write-endurance. This, along with the write-variation introduced by the cache management policies, can lead to very small cache lifetime. In this paper, we propose ENLIVE, a technique for ENhancing the LIfetime of non-Volatile cachEs. Our technique uses a small SRAM (static random access memory) storage, called HotStore. ENLIVE detects frequently written blocks and transfers them to the HotStore so that they can be accessed with smaller latency and energy. This also reduces the number of writes to the NVM cache which improves its lifetime. We present microarchitectural schemes for managing the HotStore. Simulations have been performed using an x86-64 simulator and benchmarks from SPEC2006 suite. We observe that ENLIVE provides higher improvement in lifetime and better performance and energy efficiency than two state-of-the-art techniques for improving NVM cache lifetime. ENLIVE provides 8.47×, 14.67× and 15.79× improvement in lifetime or two, four and eight core systems, respectively. In addition, it works well for a range of system and algorithm parameters and incurs only small overhead.
Advanced Engineering Strategies for Periodontal Complex Regeneration
Authors: Park Chan , Kim Kyoung-Hwa , Lee Yong-Moo , Seol Yang-Jo
Published: January 2016

The regeneration and integration of multiple tissue types is critical for efforts to restore the function of musculoskeletal complex. In particular, the neogenesis of periodontal constructs for systematic tooth-supporting functions is a current challenge due to micron-scaled tissue compartmentalization, oblique/perpendicular orientations of fibrous connective tissues to the tooth root surface and the orchestration of multiple regenerated tissues. Although there have been various biological and biochemical achievements, periodontal tissue regeneration remains limited and unpredictable. The purpose of this paper is to discuss current advanced engineering approaches for periodontal complex formations; computer-designed, customized scaffolding architectures; cell sheet technology-based multi-phasic approaches; and patient-specific constructs using bioresorbable polymeric material and 3-D printing technology for clinical application. The review covers various advanced technologies for periodontal complex regeneration and state-of-the-art therapeutic avenues in periodontal tissue engineering.
Lamina Associated Polypeptide 1 (LAP1) Interactome and Its Functional Features
Authors: Serrano Joana , Da Cruz e Silva Odete , Rebelo Sandra
Published: January 2016

Lamina-associated polypeptide 1 (LAP1) is a type II transmembrane protein of the inner nuclear membrane encoded by the human gene TOR1AIP1. LAP1 is involved in maintaining the nuclear envelope structure and appears be involved in the positioning of lamins and chromatin. To date, LAP1’s precise function has not been fully elucidated but analysis of its interacting proteins will permit unraveling putative associations to specific cellular pathways and cellular processes. By assessing public databases it was possible to identify the LAP1 interactome, and this was curated. In total, 41 interactions were identified. Several functionally relevant proteins, such as TRF2, TERF2IP, RIF1, ATM, MAD2L1 and MAD2L1BP were identified and these support the putative functions proposed for LAP1. Furthermore, by making use of the Ingenuity Pathways Analysis tool and submitting the LAP1 interactors, the top two canonical pathways were “Telomerase signalling” and “Telomere Extension by Telomerase” and the top functions “Cell Morphology”, “Cellular Assembly and Organization” and “DNA Replication, Recombination, and Repair”. Once again, putative LAP1 functions are reinforced but novel functions are emerging.
Structural Dynamics of Materials under Shock Compression Investigated with Synchrotron Radiation
Authors: Ichiyanagi Kouhei , Nakamura Kazutaka
Published: January 2016

Characterizing material dynamics in non-equilibrium states is a current challenge in material and physical sciences. Combining laser and X-ray pulse sources enables the material dynamics in non-equilibrium conditions to be directly monitored. In this article, we review our nanosecond time-resolved X-ray diffraction studies with 100-ps X-ray pulses from synchrotron radiation concerning the dynamics of structural phase transitions in non-equilibrium high-pressure conditions induced by laser shock compression. The time evolution of structural deformation of single crystals, polycrystals, and glass materials was investigated. In a single crystal of cadmium sulfide, the expected phase transition was not induced within 10 ns at a peak pressure of 3.92 GPa, and an over-compressed structure was formed. In a polycrystalline sample of Y2O3 stabilized tetragonal zirconia, reversible phase transitions between tetragonal and monoclinic phases occur within 20 ns under laser-induced compression and release processes at a peak pressure of 9.8 GPa. In polycrystalline bismuth, a sudden transition from Bi-I to Bi-V phase occurs within approximately 5 ns at 11 GPa, and sequential V–III–II–I phase transitions occur within 30 ns during the pressure release process. In fused silica shocked at 3.5 GPa, an intermediate-range structural change in the nonlinear elastic region was observed.
Aluminium Foam and Magnesium Compound Casting Produced by High-Pressure Die Casting
Authors: Vicario Iban , Crespo Ignacio , Plaza Luis , Caballero Patricia , Idoiaga Ion
Published: January 2016

Nowadays, fuel consumption and carbon dioxide emissions are two of the main focal points in vehicle design, promoting the reduction in the weight of vehicles by using lighter materials. The aim of the work is to evaluate the influence of different aluminium foams and injection parameters in order to obtain compound castings with a compromise between the obtained properties and weight by high-pressure die cast (HPDC) using aluminium foams as cores into a magnesium cast part. To evaluate the influence of the different aluminium foams and injection parameters on the final casting products quality, the type and density of the aluminium foam, metal temperature, plunger speed, and multiplication pressure have been varied within a range of suitable values. The obtained compound HPDC castings have been studied by performing visual and RX inspections, obtaining sound composite castings with aluminium foam cores. The presence of an external continuous layer on the foam surface and the correct placement of the foam to support injection conditions permit obtaining good quality parts. A HPDC processed magnesium-aluminium foam composite has been developed for a bicycle application obtaining a suitable combination of mechanical properties and, especially, a reduced weight in the demonstration part.
Development of an Optimized Protocol for NMR Metabolomics Studies of Human Colon Cancer Cell Lines and First Insight from Testing of the Protocol Using DNA G-Quadruplex Ligands as Novel Anti-Cancer Drugs
Authors: Lauri Ilaria , Savorani Francesco , Iaccarino Nunzia , Zizza Pasquale , Pavone Luigi , Novellino Ettore , Engelsen Søren , Randazzo Antonio
Published: January 2016

The study of cell lines by nuclear magnetic resonance (NMR) spectroscopy metabolomics represents a powerful tool to understand how the local metabolism and biochemical pathways are influenced by external or internal stimuli. In particular, the use of adherent mammalian cells is emerging in the metabolomics field in order to understand the molecular mechanism of disease progression or, for example, the cellular response to drug treatments. Hereto metabolomics investigations for this kind of cells have generally been limited to mass spectrometry studies. This study proposes an optimized protocol for the analysis of the endo-metabolome of human colon cancer cells (HCT116) by NMR. The protocol includes experimental conditions such as washing, quenching and extraction. In order to test the proposed protocol, it was applied to an exploratory study of cancer cells with and without treatment by anti-cancer drugs, such as DNA G-quadruplex binders and Adriamycin (a traditional anti-cancer drug). The exploratory NMR metabolomics analysis resulted in NMR assignment of all endo-metabolites that could be detected and provided preliminary insights about the biological behavior of the drugs tested.
Lysophosphatidylinositol Signalling and Metabolic Diseases
Authors: Arifin Syamsul , Falasca Marco
Published: January 2016

Metabolism is a chemical process used by cells to transform food-derived nutrients, such as proteins, carbohydrates and fats, into chemical and thermal energy. Whenever an alteration of this process occurs, the chemical balance within the cells is impaired and this can affect their growth and response to the environment, leading to the development of a metabolic disease. Metabolic syndrome, a cluster of several metabolic risk factors such as abdominal obesity, insulin resistance, high cholesterol and high blood pressure, and atherogenic dyslipidaemia, is increasingly common in modern society. Metabolic syndrome, as well as other diseases, such as diabetes, obesity, hyperlipidaemia and hypertension, are associated with abnormal lipid metabolism. Cellular lipids are the major component of cell membranes; they represent also a valuable source of energy and therefore play a crucial role for both cellular and physiological energy homeostasis. In this review, we will focus on the physiological and pathophysiological roles of the lysophospholipid mediator lysophosphatidylinositol (LPI) and its receptor G-protein coupled receptor 55 (GPR55) in metabolic diseases. LPI is a bioactive lipid generated by phospholipase A (PLA) family of lipases which is believed to play an important role in several diseases. Indeed LPI can affect various functions such as cell growth, differentiation and motility in a number of cell-types. Recently published data suggest that LPI plays an important role in different physiological and pathological contexts, including a role in metabolism and glucose homeostasis.
Temperature Sensing in Modular Microfluidic Architectures
Authors: Bhargava Krisna , Thompson Bryant , Tembhekar Anoop , Malmstadt Noah
Published: January 2016

A discrete microfluidic element with integrated thermal sensor was fabricated and demonstrated as an effective probe for process monitoring and prototyping. Elements were constructed using stereolithography and market-available glass-bodied thermistors within the modular, standardized framework of previous discrete microfluidic elements demonstrated in the literature. Flow rate-dependent response due to sensor self-heating and microchannel heating and cooling was characterized and shown to be linear in typical laboratory conditions. An acid-base neutralization reaction was performed in a continuous flow setting to demonstrate applicability in process management: the ratio of solution flow rates was varied to locate the equivalence point in a titration, closely matching expected results. This element potentially enables complex, three-dimensional microfluidic architectures with real-time temperature feedback and flow rate sensing, without application specificity or restriction to planar channel routing formats.
A New Bioactive Metabolite Isolated from the Red Sea Marine Sponge Hyrtios erectus
Authors: Elhady Sameh , El-Halawany Ali , Alahdal Abdulrahman , Hassanean Hashim , Ahmed Safwat
Published: January 2016

Chemical investigation of the lipophilic fraction of Hyrtios erectus, a Red Sea sponge, yielded a new pentacyclic nitrogen-containing scalarane; 24-methoxypetrosaspongia C (1), together with the previously reported scalaranes sesterstatin 3 (2), 12-deacetyl-12-epi-scalaradial (3) and 12-deacetyl-12,18-di-epi-scalaradial (4). The compounds were identified using HRESIMS, 1D and 2D NMR experiments. The isolated compounds showed growth inhibitory activity against hepatocellular carcinoma (HepG2), colorectal carcinoma (HCT-116) and breast adenocarcinoma cells (MCF-7).
HPLC Analysis, Optimization of Extraction Conditions and Biological Evaluation of Corylopsis coreana Uyeki Flos
Authors: Seo Ji-Hye , Kim Jung-Eun , Shim Jung-Hyun , Yoon Goo , Bang Mi-Ae , Bae Chun-Sik , Lee Kyung-Jin , Park Dae-Hun , Cho Seung-Sik
Published: January 2016

A method for the separation and quantification of three flavonoids and one isocoumarin by reverse-phase high performance liquid chromatography (HPLC) has been developed and validated. Four constituents present in a crude ethanolic extract of the flowers of Coryloposis coreana Uyeki, were analyzed. Bergenin, quercetin, quercitrin and isosalipurposide were used as calibration standards. In the present study, an excellent linearity was obtained with an r2 higher than 0.999. The chromatographic peaks showed good resolution. In combination with other validation data, including precision, specificity, and accuracy, this method demonstrated good reliability and sensitivity, and can be conveniently used for the quantification of bergenin, quercetin, quercitrin and isosalipurposide in the crude ethanolic extract of C. coreana Uyeki flos. Furthermore, the plant extracts were analyzed with HPLC to determine the four constituents and compositional differences in the extracts obtained under different extraction conditions. Several extracts of them which was dependent on the ethanol percentage of solvent were also analyzed for their antimicrobial and antioxidant activities. One hundred % ethanolic extract from C. coreana Uyeki flos showed the best antimicrobial activity against the methicillin-resistant Staphylococcus aureus (MRSA) strain. Eighty % ethanolic extract showed the best antioxidant activity and phenolic content. Taken of all, these results suggest that the flower of C. coreana Uyeki flos may be a useful source for the cure and/or prevention of septic arthritis, and the validated method was useful for the quality control of C. coreana Uyeki.
Efficient Synthesis and Antibacterial Evaluation of (±)-Yanglingmycin and Its Analogues
Authors: Dan Wenjia , Geng Huiling , Qiao Jianwen , Guo Rui , Wei Shaopeng , Li Longbo , Wu Wenjun , Zhang Jiwen
Published: January 2016

An efficient synthetic route was developed for the large-scale preparation of (±)-Yanglingmycin and its analogues. Three series of derivatives of (±)-Yanglingmycin were synthesized and the structures of all compounds were elucidated by analyses of NMR and ESI-MS spectra data. Moreover, their antibacterial activities against seven species of bacteria were systematically evaluated by the micro-broth dilution method, most of which displayed considerable activity. It was worth noting that compounds 5b, 5c, 5d, 6g, and 7 were found to be the most promising leading candidates, with peak MIC values of 0.98 μg·mL−1 for Bacillus subtilis, which is superior to positive controls (MIC = 3.91 μg·mL−1). The above results might lay the firm foundation for the design and synthesis of novel antibacterial drugs based on (±)-Yanglingmycin.
Nutritional and Biochemical Profiling of Leucopaxillus candidus (Bres.) Singer Wild Mushroom
Authors: Vieira Vanessa , Barros Lillian , Martins Anabela , Ferreira Isabel
Published: January 2016

The wild mushroom Leucopaxillus candidus (Bres.) Singer was studied for the first time to obtain information about its chemical composition, nutritional value and bioactivity. Free sugars, fatty acids, tocopherols, organic and phenolic acids were analysed by chromatographic techniques coupled to different detectors. L. candidus methanolic extract was tested regarding antioxidant potential (reducing power, radical scavenging activity and lipid peroxidation inhibition). L. candidus was shown to be an interesting species in terms of nutritional value, with high content in proteins and carbohydrates, but low fat levels, with the prevalence of polyunsaturated fatty acids. Mannitol was the most abundant free sugar and β-tocopherol was the main tocopherol isoform. Other compounds detected were oxalic and fumaric acids, p-hydroxybenzoic and cinnamic acids. The methanolic extract revealed antioxidant activity and did not show hepatoxicity in porcine liver primary cells. The present study provides new information about L. candidus.
Synthesis of Canthardin Sulfanilamides and Their Acid Anhydride Analogues via a Ring-Opening Reaction of Activated Aziridines and Their Associated Pharmacological Effects
Authors: Chiang Ling-Ling , Tseng Ing-Jy , Lin Pen-Yuan , Sheu Shiow-Yunn , Lin Ching-Tung , Hsieh Yun-Han , Lin Yi-Jing , Chen Hsiao-Ling , Lin Mei-Hsiang
Published: January 2016

The cantharidinimide derivatives, 5a–h, including sulfanilamides containing pyrimidyl, pyrazinyl, hydrogen, thiazolyl, and oxazolyl groups were synthesized. Modification of cantharidinimide by means of the reaction of activated aziridine ring opening led to the discovery of a novel class of antitumor compounds. The analogues 10i–k, 11l–n, 12o–p, and 16q–s were obtained from treating cantharidinimide 6 and analogues (7, 8, and 13) with activated aziridines, which produced a series of ring-opened products including normal and abnormal types. Some of these compounds showed cytotoxic effects in vitro against HL-60, Hep3B, MCF7, and MDA-MB-231 cancer cells. The most potent cytostatic compound, N-cantharidinimido-sulfamethazine (5a), exhibited anti-HL-60 and anti-Hep3B cell activities. Two compounds 5g and 5h displayed slight effects on the Hep3B cell line, while the other compounds produced no response in these four cell lines.