bluuebunny/crossref_metadata_2025 huggingface dataset:
Enhancement of Biocontrol Activity of Cryptococcus laurentii by Silicon and the Possible Mechanisms Involved
Authors: Qin Guo Z. , Tian Shi P.
Published: May 2007

Exogenous application of silicon (Si) in the form of sodium metasilicate reduced disease development caused by Penicillium expansum and Monilinia fructicola in sweet cherry fruit at 20°C. The inhibition of fruit decay was correlated closely with Si concentrations. Silicon at concentrations of 1%, in combination with the biocontrol agent Cryptococcus laurentii at 1 × 107 cells per ml, provided synergistic effects against both diseases. Population dynamics of C. laurentii were stimulated by Si 48 h after the yeast treatment in the wounds of sweet cherry fruit. Silicon strongly inhibited spore germination and germ tube elongation of P. expansum and M. fructicola in vitro. Based on results with scanning electron microscopy, growth of both pathogens was significantly inhibited by Si in the wounds of sweet cherry fruit. Compared with the wounded water control, Si treatment induced a significant increase in the activities of phenylalanine ammonia-lyase, polyphenoloxidase, and peroxidase in sweet cherry fruit but did not increase the levels of lignin. Application of Si activated a cytochemical reaction and caused tissue browning near the site of wounding. Based on our studies, the improvement in biocontrol efficacy of antagonistic yeast when combined with Si may be associated with the increased population density of antagonistic yeast by Si, the direct fungitoxicity property of Si to the pathogens, and the elicitation of biochemical defense responses in fruit.
Behavior of Ralstonia solanacearum Race 3 Biovar 2 During Latent and Active Infection of Geranium
Authors: Swanson Jill K. , Yao Jian , Tans-Kersten Julie , Allen Caitilyn
Published: May 2007

Southern wilt of geraniums (Pelargonium hortorum), caused by the soilborne bacterium Ralstonia solanacearum race 3 biovar 2 (R3bv2), has inflicted significant economic losses when geranium cuttings latently infected with this quarantine pest were imported into the United States. Little is known about the interaction between R. solanacearum and this ornamental host. Using UW551, a virulent R3bv2 geranium isolate from a Kenyan geranium, we characterized development of Southern wilt disease and R3bv2 latent infection on geranium plants. Following soil inoculation, between 12 and 26% of plants became latently infected, carrying average bacterial populations of 4.8 × 108 CFU/g of crown tissue in the absence of visible symptoms. Such latently infected plants shed an average of 1.3 × 105 CFU/ml in soil run-off water, suggesting a non-destructive means of testing pools of asymptomatic plants. Similarly, symptomatic plants shed 2 × 106 CFU/ml of run-off water. A few hundred R. solanacearum cells introduced directly into geranium stems resulted in death of almost all inoculated plants. However, no disease transmission was detected after contact between wounded leaves. Increasing temperatures to 28°C for 2 weeks did not convert all latently infected plants to active disease, although disease development was temperature dependent. Holding plants at 4°C for 48 h, a routine practice during geranium cutting shipment, did not increase frequency of latent infections. R. solanacearum cells were distributed unevenly in the stems and leaves of both symptomatic and latently infected plants, meaning that random leaf sampling is an unreliable testing method. UW551 also caused potato brown rot and bacterial wilt of tomato, surpassing race 1 strain K60 in virulence on tomato at the relatively cool temperature of 24°C.
Forensic Pathology of Canadian Bread Wheat: The Case of Tan Spot
Authors: Lamari Lakhdar , McCallum Brent D. , dePauw Ron M.
Published: May 2007

Pyrenophora tritici-repentis causes necrosis and chlorosis in its wheat host. Susceptibility to races 2 (necrosis) and 5 (chlorosis) of the pathogen is known to be mediated by Ptr ToxA and Ptr ToxB, respectively. Sensitivity to each toxin is controlled by a single dominant and independently inherited gene. We used sensitivity to Ptr ToxA and Ptr ToxB as two genetic markers to investigate the origin and the state of tan spot susceptibility in Canadian Western Red Spring (CWRS) wheat over a period of more than a century. Sensitivity to Ptr ToxA, the toxin produced by nearly all isolates of the pathogen collected in the past 20 years in western Canada, appears to have been present in the first major cultivar, Red Fife, grown massively in the late 1800s. Sensitivity then was transmitted unknowingly into Canadian wheat lines through extensive use of backcrossing to maintain the Marquis-Thatcher breadmaking quality. Sensitivity to Ptr ToxA, which nearly disappeared from cultivars grown in western Canada in the 1950s, was reintroduced in the 1960s and unintentionally bred into many of the present-day cultivars. Sensitivity to Ptr ToxB, a toxin rarely found in isolates from western Canada, appeared with the release of Thatcher in 1934 and was transferred to many cultivars through backcross programs. In spite of large areas planted to Ptr ToxAand Ptr ToxB-sensitive cultivars over decades, tan spot epidemics remained sporadic until the 1970s. The results of this study raise the problem of the narrowing genetic base of CWRS wheat lines and the potential for unanticipated threats from plant pathogens. The intercrossing of genetically diverse material in one Canadian wheat breeding program resulted in the release of several modern cultivars with resistance to tan spot. The absence of wild-type Ptr ToxB-producing isolates in western Canada remains unexplained, given that sensitivity to Ptr ToxB was present continuously in western Canadian cultivars grown on vast areas for more than 70 years.
Histological Characterization of Resistance to Different Root-Knot Nematode Species Related to Phenolics Accumulation inCapsicum annuum
Authors: Pegard A. , Brizzard G. , Fazari A. , Soucaze O. , Abad P. , Djian-Caporalino C.
Published: May 2007

In the pepper Capsicum annuum CM334, which is used by breeders as a source of resistance to Phytophthora spp. and potyviruses, a resistance gene entirely suppresses reproduction of the root-knot nematode (Meloidogyne spp.). The current study compared the histological responses of this resistant line and a susceptible cultivar to infection with the three most damaging root-knot nematodes: M. arenaria, M. incognita, or M. javanica. Resistance of CM334 to root-knot nematodes was associated with unidentified factors that limited nematode penetration and with post-penetration biochemical responses, including the hypersensitive response, which apparently blocked nematode migration and thereby prevented juvenile development and reproduction. High-performance liquid chromatography analysis suggested that phenolic compounds, especially chlorogenic acid, may be involved in CM334 resistance. The response to infection in the resistant line varied with root-knot nematode species and was correlated with nematode behavior and pathogenicity in the susceptible cultivar: nematode species that quickly reached the vascular cylinder and initiated feeding sites in the susceptible cultivar were quickly recognized in CM334 and stopped in the epidermis or cortex. After comparing our data with those from other resistant pepper lines, we suggest that timing of the resistance response and the mechanism of resistance vary with plant genotype, resistance gene, and root-knot nematode species.
Green Manures and Crop Sequences Influence Potato Diseases and Pathogen Inhibitory Activity of Indigenous Streptomycetes
Authors: Wiggins B. E. , Kinkel L. L.
Published: May 2007

A 2-year field trial was conducted to determine the effects of green manures and crop sequences on potato scab and Verticillium wilt. In addition, indigenous streptomycete densities and in vitro pathogen inhibitory activity were measured and their relationships to plant disease were determined. Green manures (buckwheat, canola, or fallow controls) were tested in conjunction with three crop sequences (alfalfa-potato, cornpotato, and potato-potato). Compared with fallow controls, tubers grown in buckwheat-treated soil had significantly lower Verticillium wilt ratings, and tubers grown in buckwheat- or canola-treated soil had greater yields. Potatoes grown in soil planted to corn or alfalfa the previous year had significantly lower Verticillium wilt and potato scab ratings as well as higher yields than potatoes grown in soil previously planted to potato. Streptomycetes from soils collected from green manure-treated plots tended to have greater in vitro pathogen inhibitory activity than streptomycetes from fallow-treated plots. Furthermore, streptomycete pathogen inhibitory activity was frequently negatively correlated with plant disease and positively correlated with potato yield. These results indicate that green manure treatments may contribute to active management of the pathogen inhibitory activity of the streptomycete community to achieve plant disease control.
Relationship Between Oxalate, Oxalate Oxidase Activity, Oxalate Sensitivity, and White Mold Susceptibility in Phaseolus coccineus
Authors: Chipps Timothy J. , Gilmore Barbara , Myers James R. , Stotz Henrik U.
Published: May 2007

Sclerotinia sclerotiorum is a necrotrophic pathogen that devastates the yields of numerous crop species, including beans. The disease in common bean and pea is referred to as white mold. We examined the relationship between oxalate, an established virulence factor of S. sclerotiorum, and partial white mold resistance of scarlet runner bean (Phaseolus coccineus). P. coccineus genotypes PI 255956 (‘Mayan White Runner’) and PI 535278 (Tars-046A) were more resistant than susceptible ‘Wolven Pole’. Sensitivity to oxalate ranked highest for Wolven Pole, lowest for PI 255956, and intermediate for PI 535278. Oxalate concentrations were similar in infected stem tissues of the partially resistant lines and lower than Wolven Pole. Moreover, oxalate oxidase and superoxide dismutase activities were absent in the more resistant lines but induced in Wolven Pole. Collectively, these results suggest that genetic differences in susceptibility to S. sclerotiorum among different P. coccineus lines are partially dependent on oxalic acid.
Suppression of Seedling Damping-Off Caused by Pythium ultimum, P. irregulare, and Rhizoctonia solani in Container Media Amended with a Diverse Range of Pacific Northwest Compost Sources
Authors: Scheuerell Steven J. , Sullivan Dan M. , Mahaffee Walter F.
Published: May 2007

Suppression of seedling damping-off disease caused by Pythium spp. and Rhizoctonia solani is a potential benefit of formulating soilless container media with compost. Thirty-six compost samples from Pacific Northwest commercial composting facilities were analyzed for a number of physical, chemical, and biological properties, including suppression of damping-off caused by Pythium ultimum, P. irregulare, and R. solani. The samples were produced from diverse feedstocks and composting technol ogies; this was reflected in a large degree of variability in the measured properties. When mixed with sphagnum peat moss and inorganic aggregates, 67% of the compost samples significantly suppressed P. irregulare damping-off of cucumber, 64% suppressed P. ultimum damping-off of cucumber, and 17% suppressed damping-off of cabbage caused by R. solani. Suppression of Pythium damping-off was related to the potential of compost to support microbial activity and a qualitative index of ammonia volatilization. Suppression of Rhizoctonia damping-off was not related to any one compost factor. Currently available compost products potentially could provide commercially acceptable control of damping-off caused by Pythium spp., but it is necessary to fortify composts with microbial antagonists for the control of R. solani.
Real-Time Quantitative RT-PCR of Defense-Associated Gene Transcripts of Rhizoctonia solani-Infected Bean Seedlings in Response to Inoculation with a Nonpathogenic Binucleate Rhizoctonia Isolate
Authors: Wen Kui , Seguin Philippe , St.-Arnaud Marc , Jabaji-Hare Suha
Published: May 2007

Certain isolates of nonpathogenic binucleate Rhizoctonia spp. (np-BNR) are effective biocontrol agents against seedling root rot and damping-off. Inoculation of bean seed with np-BNR strain 232-CG at sowing reduced disease symptoms in bean (Phaseolus vulgaris) seedlings caused by R. solani. Molecular analyses of the spatial expression of three defense-associated genes were carried out using real-time quantitative reverse transcription-polymerase chain reaction (QRT-PCR) assays. This method allowed accurate quantitative evaluation of transcript levels of pG101 encoding for 1,3-β-D-glucanase, gPAL1 encoding for phenylalanine ammonia lyase, and CHS17 encoding for chalcone synthase in 1- and 2-week-old bean seedlings that were inoculated simultaneously with np-BNR and infected with R. solani, and in seedlings that were singly inoculated with either fungi or not inoculated. In the seedlings that were infected with R. solani only, results revealed that, following infection, activation of all defense-associated gene transcripts was achieved with significant increases ranging from 7- to 40-fold greater than the control, depending on the defense gene and tissue analyzed. Seedlings that were treated with np-BNR and infected with R. solani had expression similar to those that were treated with np-BNR only, but the levels were significantly down-regulated compared with those that were infected with R. solani only. These findings indicate that disease suppression by np-BNR isolate is not correlated to pG101, gPAL1, and CHS17 gene activation.
Genetic Analysis and Molecular Mapping of Wheat Genes Conferring Resistance to the Wheat Stripe Rust and Barley Stripe Rust Pathogens
Authors: Pahalawatta Vihanga , Chen Xianming
Published: May 2007

Stripe rust is one of the most important diseases of wheat and barley worldwide. On wheat it is caused by Puccinia striiformis f. sp. tritici and on barley by P. striiformis f. sp. hordei Most wheat genotypes are resistant to P. striiformis f. sp. hordei and most barley genotypes are resistant to P. striiformis f. sp. tritici. To determine the genetics of resistance in wheat to P. striiformis f. sp. hordei, crosses were made between wheat genotypes Lemhi (resistant to P. striiformis f. sp. hordei) and PI 478214 (susceptible to P. striiformis f. sp. hordei). The greenhouse seedling test of 150 F2progeny from the Lemhi × PI 478214 cross, inoculated with race PSH-14 of P. striiformis f. sp. hordei, indicated that Lemhi has a dominant resistance gene. The single dominant gene was confirmed by testing seedlings of the F1, BC1to the two parents, and 150 F3lines from the F2plants with the same race. The tests of the F1, BC1, and F3progeny with race PSH-48 of P. striiformis f. sp. hordei and PST-21 of P. striiformis f. sp. tritici also showed a dominant gene for resistance to these races. Cosegregation analyses of the F3data from the tests with the two races of P. striiformis f. sp. hordei and one race of P. striiformis f. sp. tritici suggested that the same gene conferred the resistance to both races of P. striiformis f. sp. hordei, and this gene was different but closely linked to Yr21, a previously reported gene in Lemhi conferring resistance to race PST-21 of P. striiformis f. sp. tritici. A linkage group consisting of 11 resistance gene analog polymorphism (RGAP) markers was established for the genes. The gene was confirmed to be on chromosome 1B by amplification of a set of nullitetrasomic Chinese Spring lines with an RGAP marker linked in repulsion with the resistance allele. The genetic information obtained from this study is useful in understanding interactions between inappropriate hosts and pathogens. The gene identified in Lemhi for resistance to P. striiformis f. sp. hordei should provide resistance to barley stripe rust when introgressed into barley cultivars.
Spatial Patterns of Viable Spore Deposition ofGibberella zeaein Wheat Fields
Authors: Schmale David G. , Shah Denis A. , Bergstrom Gary C.
Published: May 2007

An increased understanding of the epidemiology of Gibberella zeae will contribute to a rational and informed approach to the management of Fusarium head blight (FHB). An integral phase of the FHB cycle is the deposition of airborne spores, yet there is no information available on the spatial pattern of spore deposition of G. zeae above wheat canopies. We examined spatial patterns of viable spore deposition of G. zeae over rotational (lacking cereal debris) wheat fields in New York in 2002 and 2004. Viable, airborne spores (ascospores and macroconidia) of G. zeae were collected above wheat spikes on petri plates containing a selective medium and the resulting colonies were counted. Spores of G. zeae were collected over a total of 68 field environments (three wheat fields during 54 day and night sample periods over 2 years) from spike emergence to kernel milk stages of local wheat. Spatial patterns of spore deposition were visualized by contour plots of spore counts over entire fields. The spatial pattern of spore deposition was unique for each field environment during each day and night sample period. Spore deposition patterns during individual sample periods were classified by spatial analysis by distance indices (SADIE) statistics and Mantel tests. Both analyses indicated that the majority (93%) of the spore deposition events were random, with the remainder being aggregated. All of the aggregated patterns were observed during the night. Observed patterns of spore deposition were independent of the mean number of viable spores deposited during individual sample periods. The spatial pattern for cumulative spore deposition during anthesis in both years became aggregated over time. Contour maps of daily and cumulative spore deposition could be compared with contour maps of FHB incidence to gain insights into inoculum thresholds and the timing of effective inoculum for infection.
Model Wheat Genotypes as Tools to Uncover Effective Defense Mechanisms Against the Hemibiotrophic Fungus Bipolaris sorokiniana
Authors: Ibeagha Aloysius Ebelechukwu , Hückelhoven Ralph , Schäfer Patrick , Singh Devendra Pal , Kogel Karl-Heinz
Published: May 2007

We investigated the interaction of several differentially resistant wheatwith the hemibiotrophic phytopathogenic fungus Bipolaris sorokiniana (teleomorph Cochliobolus sativus). Wheat genotypes Yangmai, M 3 (W7976), Shanghai 4, and Chirya 7 showed higher levels of resistancewith cv. Sonalika, used as a susceptible control. In amicroscopic inspection, we found that fungal penetration intoepidermal layer failed mostly through a cell wall-associated defense. In cases where the fungus successfully overcame epidermal, its spread within the mesophyll tissue (necrotrophic phase) wasin the more resistant genotypes. Epidermal cell wall-associated, spreading as well as the extent of electrolyte leakage of infected, correlated well with field resistance. We propose that cellular hostsuch as formation of cell wall appositions as well as the degreeearly mesophyll spreading of fungal hyphae are indicative of thepotential of the respective host genotype and, therefore, could befor the characterization of new spot blotch resistance traits in cereals.
Engineered Mild Strains of Papaya ringspot virus for Broader Cross Protection in Cucurbits
Authors: You Bang-Jau , Chiang Chu-Hui , Chen Li-Fang , Su Wei-Chih , Yeh Shyi-Dong
Published: May 2007

Papaya ringspot virus (PRSV) HA5-1, a mild mutant of type P Hawaii severe strain (PRSV P-HA), has been widely used for the control of PRSV type P strains in papaya, but did not provide practical protection against PRSV type W strains in cucurbits. In order to widen the protection effectiveness against W strains, chimeric mild strains were constructed from HA5-1 to carry the heterologous 3′ genomic region of a type W strain W-CI. Virus accumulation of recombinants and their crossprotection effectiveness against W-CI and P-HA were investigated. In horn melon and squash plants, the recombinant carrying both the heterologous coat protein (CP) coding region and the 3′ untranslated region (3′UTR), but not the heterologous CP coding region alone, significantly enhanced the protection against W-CI. The heterologous 3′UTR alone is critical for the enhancement of the protection against W-CI in horn melon, but not in zucchini squash. In papaya, the heterologous CP coding region or 3′UTR alone, but not both together, significantly reduced the effectiveness of cross protection against P-HA. Our recombinants provide broader protection against both type W and P strains in cucurbits; however, the protective effectiveness is also affected by virus accumulation, the organization of the 3′ genomic region, and host factors.
Evaluation of Maize Inbreds for Maize stripe virus and Maize mosaic virus Resistance: Disease Progress in Relation to Time and the Cumulative Number of Planthoppers
Authors: Dintinger J. , Boissot N. , Chiroleu F. , Hamon P. , Reynaud B.
Published: May 2007

Five tropical maize lines were tested and compared with the susceptible control line B73 for resistance to Maize stripe virus (MStV) and Maize mosaic virus (MMV), both propagatively transmitted by the planthopper Peregrinus maidis (Homoptera: Delphacidae). Resistance to each virus was evaluated separately by artificial inoculations with planthoppers viruliferous for either one virus or the other. Disease incidence and symptom severity progression were quantified in relation to time and the cumulative number of planthoppers. Line Hi40 was found to be susceptible to MStV and highly resistant to MMV. Generally, no MMV symptoms developed on Hi40, even under intense inoculation pressure by a large number of viruliferous planthoppers. Line Rev81 showed a partial but strong resistance to MStV, which mainly reduced disease incidence. Nevertheless, this resistance to MStV was the highest ever reported and held up, even when challenged by large numbers of planthoppers. The percentage of infected plants in line Rev81 never exceeded 30 to 40% in our experiments. Moderate levels of resistance to MStV, and to a lesser extent MMV, were found in lines 37-2, A211, and Mp705. However, resistance in these lines was completely overcome using a large number of insects transmitting either of the two viruses. These results suggest that different types of resistance to MMV and MStV are available in maize lines from Caribbean and Mascarene germ plasm. The expression of virus-specific resistance identified in Hi40 and Rev81 lines was not affected by intense inoculation pressure. In contrast, the moderate resistance in 37-2, A211, and Mp705 was partially effective against both viruses but not at high inoculation pressure. These different types of resistance, when present in the same genotype, could provide protection against both viruses.
Polyvalent Degenerate Oligonucleotides Reverse Transcription-Polymerase Chain Reaction: A Polyvalent Detection and Characterization Tool for Trichoviruses, Capilloviruses, and Foveaviruses
Authors: Foissac Xavier , Svanella-Dumas Laurence , Gentit Pascal , Dulucq Marie-Josée , Marais Armelle , Candresse Thierry
Published: May 2007

A polyvalent nested reverse transcription-polymerase chain reaction (RT-PCR) test using degenerate primers containing inosine (polyvalent degenerate oligonucleotides [PDO]) was developed for filamentous fruit tree viruses belonging to the genera Trichovirus, Capillovirus, and Foveavirus. The 362-bp product was amplified from nucleic acid extracts obtained from Prunus and Malus leaf samples. All the viruses targeted were detected, demonstrating the polyvalence of the test. The variability of a collection of Apple chlorotic leaf spot virus isolates was analyzed using the sequence of the PDO RT-PCR amplified cDNAs. The technique was also used to screen stone fruit materials infected with known agents or with virus-like graft-transmissible diseases of unknown etiology. The results obtained further validated the broad specificity of the assay, with positive amplification obtained for uncharacterized or partially characterized viruses associated with cherry and peach disorders. Sequencing the amplified PCR products either directly or after cloning allowed the identification of variants of known agents and the tentative identification of two new agents, a Trichovirus and a Foveavirus. In addition, sequence comparisons demonstrated that the sequence of the targeted region is phylogenetically informative and of predictive taxonomic value.
Stable Polymorphisms in a Two-Locus Gene-for-Gene System
Authors: Segarra J.
Published: May 2007

A two-locus gene-for-gene model is presented to analyze coevolutionary dynamics in interactions between host plants and their pathogens. Using both analytical and simulation approximations, we show that the behavior of the model is very simple with one locus. In the reciprocal genetic feedback version, there is a smooth outward spiral toward the boundaries. In the delayed feedback version, there is an infinite family of closed curves corresponding to different initial conditions. Both versions of the model are stabilized by the addition of recurrent mutation. Either a stable interior equilibrium or a stable limit cycle appears. But with the two-locus model, different coevolutionary outcomes are predicted according to the parameter values. For a wide range of small and medium values of virulence and resistance costs, complex fluctuations arise. The number of virulence alleles per isolate and the number of resistance alleles per plant cycle indefinitely. If the costs of both virulence and resistance are above a threshold, the final state of the coevolutionary dynamics is a stable single-resistance static polymorphism in the host and avirulence in the parasite. An equivalent threshold to maintain a disease-free host population was obtained analytically for a multilocus system. These expressions can be used to determine the number of single-resistance host genotypes that would have to be present in a mixture to prevent the spread of any virulent race of pathogen. The model demonstrates that it is preferable to use mixtures of single-resistant genotypes rather than using multiple resistance alleles in the same cultivar.
Identification of an Avirulence Gene in the Fungus Magnaporthe grisea Corresponding to a Resistance Gene at the Pik Locus
Authors: Yasuda N. , Noguchi M. T. , Fujita Y.
Published: May 2007

A rice isolate of Magnaporthe grisea collected from China was avirulent on rice cvs. Hattan 3 and 13 other Japanese rice cultivars. The rice cv. Hattan 3 is susceptible to almost all Japanese blast fungus isolates from rice. The genetic basis of avirulence in the Chinese isolate on Japanese rice cultivars was studied using a cross between the Chinese isolate and a laboratory isolate. The segregation of avirulence or virulence was studied in 185 progeny from the cross, and monogenic control was demonstrated for avirulence to the 14 rice cultivars. The resistance gene that corresponds to the avirulence gene (Avr-Hattan 3) is thought to be located at the Pik locus. Resistance and susceptibility in response to the Chinese isolate in F3 lines of a cross of resistant and susceptible rice cultivars were very similar to the Pik tester isolate, Ken54-20. Random amplified polymorphic DNA markers and restriction fragment length polymorphism markers from genetic maps of the fungus were used to construct a partial genetic map of Avr-Hattan 3. We obtained several flanking markers and one co-segregated marker of Avr-Hattan 3 in the 144 mapping population.
Genetics of Leaf Rust Resistance in Spring Wheat Cultivars Alsen and Norm
Authors: Oelke L. M. , Kolmer J. A.
Published: May 2007

Alsen is a recently released spring wheat cultivar that has been widely grown in the United States because it has resistance to Fusarium head blight and leaf rust caused by Puccinia triticina. Norm is a high yielding wheat cultivar that has been very resistant to leaf rust since it was released. Alsen and Norm were genetically examined to determine the number and identity of the leaf rust resistance genes present in both wheats. The two cultivars were crossed with leaf rust susceptible cv. Thatcher and F1 plants were backcrossed to Thatcher. Eighty one and seventy three BCF1 of Thatcher times; Alsen and Thatcher × Norm respectively, were selfed to obtain BCF2 families. The BCF2 families were tested as seedlings with different isolates of P. triticina that differed for virulence to specific leaf rust resistance genes. The BCF2 families that lacked seedling resistance were also tested as adult plants in greenhouse tests and in a field rust nursery plot. Segregation of BCF2 families indicated that Alsen had seedling genes Lr2a, Lr10, and Lr23 and adult plant genes Lr13 and Lr34. Norm was determined to have seedling genes Lr1, Lr10, Lr16, and Lr23 and adult plant genes Lr13 and Lr34. The characterization of Lr23 in the segregating populations was complicated by the presence of a suppressor gene in Thatcher and the high temperature sensitivity of resistance expression for this gene. The effective leaf rust resistance in Alsen is due to the interaction of Lr13 and Lr23, with Lr34; and the effective leaf rust resistance in Norm is due to the interaction of Lr13, Lr16, and Lr23, with Lr34.
An Analysis of Host Adaptation and Its Relationship with Virulence in Cucumber mosaic virus
Authors: Sacristán Soledad , Fraile Aurora , Malpica José M. , García-Arenal Fernando
Published: May 2007

The host range of a pathogen can have special consequences on its evolution and the evolution of its virulence. For generalists, adaptation to different hosts may be conditioned by different trade-offs in the pathogen's life history and be affected by evolutionary processes that shape pathogen populations. We have examined adaptation of Cucumber mosaic virus (CMV) to different hosts, and analyzed the relationship between host adaptation and virulence. For this, six CMV isolates from central Spain from three different hosts were compared for the ability to multiply and to affect host growth. These analyses were done before and after an experimental evolution process consisting of 10 serial passages in the original host of the isolate. The differential capacity to infect different hosts was compatible with host adaptation. However, the capacity to multiply in different hosts did not provide evidence of host adaptation and was not improved after 10 passages, suggesting that fitness of the natural population of CMV was at, or near to, its maximum. No relationship was found between capacity of multiplication and virulence in any of the three different hosts. These results suggest that the “trade-off” model for the evolution of virulence may not apply to CMV.
Interrelationships Among SADIE Indices for Characterizing Spatial Patterns of Organisms
Authors: Xu Xiangming , Madden Laurence V.
Published: May 2007

The SADIE (spatial analysis by distance indices) methodology for data analysis is a useful approach for quantifying the patterns of organisms (in terms of patches and gaps) and testing for randomness of the patterns. We investigated the interrelationship among key SADIE indices: index for distance to regularity for a data set (Ia), a global measure of aggregation or clustering; the local clustering indices (vi and vj), scaled distances to regularity for each individual sampling unit; and the averages of vi and vj across all sampling units, which are additional global measures of aggregation. We demonstrated that vi and vj are mathematically related to Ia and showed conditions when Ia and mean local clustering indices give very similar results. Overall differences in average vi and Ivj I values, and between Ia and these averages, decreased with increasing size of the sampling grid in a simulation study. This was because one component of vi and vj (iY)—a measure of the distance to regularity under randomness for a given location (not a given count)—was found generally to vary little with location, except for locations near corners of the sampling grid. Nevertheless, because distance to regularity for individual observed counts was location-dependent, and this location effect varied with the observed counts value as well, a new-scaled index for each count × location combination may be warranted. The implications of these findings on epidemiological research are discussed.
Automated and Unbiased Image Analyses as Tools in Phenotypic Classification of Small-SporedAlternariaspp.
Authors: Andersen Birgitte , Hansen Michael E. , Smedsgaard Jørn
Published: May 2007

For more than 25 years, controversy has surrounded the characterization and differentiation of small-spored Alternaria spp. And, therefore, the application of names of several species that are involved in the pathology of diseases related to host-specific toxin production. The name A. alternata often has been broadly applied to various morphologically and chemically distinct groups of isolates from different hosts. The purpose of this study was to develop and evaluate automated and unbiased image analysis systems that will analyze different phenotypic characters and facilitate testing and application of the morphological species concept in Alternaria taxonomy. Host-specific toxin-producing Alternaria isolates assigned to five morpho-species were compared with representative isolates of morphologically distinct A. alternata. Combined results of growth rates at different temperatures, colony morphology, and metabolite profiles were found to be useful in characterization and differentiation of small-spored Alternaria spp. when standardized conditions are applied and representative isolates employed for comparison.
Structure and Origin of Xanthomonas arboricola pv. pruni Populations Causing Bacterial Spot of Stone Fruit Trees in Western Europe
Authors: Boudon Sylvain , Manceau Charles , Nottéghem Jean-Loup
Published: May 2007

Xanthomonas arboricola pv. pruni, the causal agent of bacterial spot on stone fruit, was found in 1995 in several orchards in southeastern France. We studied population genetics of this emerging pathogen in comparison with populations from the United States, where the disease was first described, and from Italy, where the disease has occurred since 1920. Four housekeeping genes (atpD, dnaK, efp, and glnA) and the intergenic transcribed spacer region were sequenced from a total of 3.9 kb of sequences, and fluorescent amplified fragment length polymorphism (FAFLP) analysis was performed. A collection of 64 X. arboricola pv. pruni strains, including 23 strains from France, was analyzed. The X. arboricola pv. pruni population had a low diversity because no sequence polymorphisms were observed. Population diversity revealed by FAFLP was lower for the West European population than for the American population. The same bacterial genotype was detected from five countries on three continents, a geographic distribution that can be explained by human-aided migration of bacteria. Our data support the hypothesis that the pathogen originated in the United States and subsequently has been disseminated to other stone-fruit-growing regions of the world. In France, emergence of this disease was due to a recent introduction of the most prevalent genotype of the bacterium found worldwide.
A Climate-Based Model for Predicting Geographic Variation in Swiss Needle Cast Severity in the Oregon Coast Range
Authors: Manter Daniel K. , Reeser Paul W. , Stone Jeffrey K.
Published: May 2007

Since the early 1990s, Swiss needle cast disease caused by Phaeocryptopus gaeumannii has been increasing in Douglas-fir plantations in the Oregon Coast Range. Considerable variation in disease severity across the affected area often has been noted. We investigated the influence of site microclimate on fungal colonization as a basis for this variation with a combination of seedling inoculation and field studies. Development of P. gaeumannii ascocarps on inoculated seedlings subjected to mist, irrigation, and shading treatments was followed for 10 months. Contrary to expectations, numbers of ascocarps on foliage were negatively correlated with shade and mist and positively correlated with temperature. Numbers of ascocarps on foliage, site temperature, and leaf wetness were monitored over 5 years at nine field sites in the Oregon Coast Range. Factors most highly correlated with ascocarp abundance were winter mean daily temperature and spring cumulative leaf wetness. Predictive models for disease severity on the basis of these correlations were tested against disease and climate data measured at field sites during 2003-2004. A temperature-based disease prediction model was developed in combination with geographical information systems (GIS)-linked climate databases to estimate disease levels across a portion of the Oregon Coast Range. This model can be used for hypothesis testing and as a decision support tool for forest managers.
Wheat (Triticum aestivum) Is Susceptible to the Parasitic Angiosperm Striga hermonthica, a Major Cereal Pathogen in Africa
Authors: Vasey R. A. , Scholes J. D. , Press M. C.
Published: May 2007

Striga hermonthica is a parasitic weed endemic to sub-Saharan Africa. It most commonly parasitizes sorghum, maize, pearl millet, and upland rice, lowering yields and affecting the welfare of over 100 million people, principally subsistence farmers. Cereal crops with complete resistance to this pathogen have not been reported. In southern and eastern Africa, where Striga spp. are endemic, 5.6 million ha of wheat are cultivated annually. Despite this, there are only isolated field reports of wheat infected with Striga spp. It is not clear whether this is due to resistance in this cereal or to environmental factors. In this article, we examined the ability of root exudates from five cultivars of wheat (Chablis, Cadenza, Hereward, Riband, and Brigadier) to trigger germination of S. hermonthica seed. A study of the development of S. hermonthica on two cultivars of wheat (Hereward and Chablis) and on a range of ancestral relatives of wheat (Triticum and Aegilops spp.) then was conducted. Last, the effect of Striga spp. on host growth and yield was examined using wheat cv. Chablis and compared with that of a highly susceptible sorghum cultivar (CSH-1). Wheat was able to support the germination, attachment, and subsequent development of Striga spp. All wheat cultivars and ancestral species of modern wheat (Triticum and Aegilops spp.) were susceptible to S. hermonthica. In addition, in wheat, infection severely lowered plant height (-24%) and biomass accumulation (-33%); a small parasite biomass elicited a large host response. In conclusion, wheat is highly susceptible to S. hermonthica and, in light of global climate change, this may have implications for wheat-producing areas of Africa.
Induced Resistance for Plant Disease Control: Maximizing the Efficacy of Resistance Elicitors
Authors: Walters Dale , Walsh David , Newton Adrian , Lyon Gary
Published: May 2007

Plants can be induced to develop enhanced resistance to pathogen infection by treatment with a variety of abiotic and biotic inducers. Biotic inducers include infection by necrotizing pathogens and plant-growth-promoting rhizobacteria, and treatment with nonpathogens or cell wall fragments. Abiotic inducers include chemicals which act at various points in the signaling pathways involved in disease resistance, as well as water stress, heat shock, and pH stress. Resistance induced by these agents (resistance elicitors) is broad spectrum and long lasting, but rarely provides complete control of infection, with many resistance elicitors providing between 20 and 85% disease control. There also are many reports of resistance elicitors providing no significant disease control. In the field, expression of induced resistance is likely to be influenced by the environment, genotype, and crop nutrition. Unfortunately, little information is available on the influence of these factors on expression of induced resistance. In order to maximize the efficacy of resistance elicitors, a greater understanding of these interactions is required. It also will be important to determine how induced resistance can best fit into disease control strategies because they are not, and should not be, deployed simply as “safe fungicides”. This, in turn, will require information on the interaction of resistance elicitors with crop management practices such as appropriate-dose fungicide use.
Factors Influencing Development of Root Rot on Ginseng Caused by Cylindrocarpon destructans
Authors: Rahman Mahfuzur , Punja Zamir K.
Published: May 2007

The fungus Cylindrocarpon destructans (Zins) Scholten is the cause of root rot (disappearing root rot) in many ginseng production areas in Canada. A total of 80 isolates of C. destructans were recovered from diseased roots in a survey of ginseng gardens in British Columbia from 2002-2004. Among these isolates, 49% were classified as highly virulent (causing lesions on unwounded mature roots) and 51% were weakly virulent (causing lesions only on previously wounded roots). Pectinase and polyphenoloxidase enzymes were produced in vitro by C. destructans isolates when they were grown on pectin and phenol as a substrate, respectively. However, highly virulent isolates produced significantly (P < 0.001) higher enzyme levels compared with weakly virulent isolates. Histopathological studies of ginseng roots inoculated with a highly virulent isolate revealed direct hyphal penetration through the epidermis, followed by intracellular hyphal growth in the cortex. Subsequent cell disintegration and accumulation of phenolic compounds was observed. Radial growth of highly and weakly virulent isolates on potato dextrose agar was highest at 18 and 21°C, respectively and there was no growth at 35°C. Mycelial mass production was significantly (P ≤ 0.01) lower at pH 7.0 compared with pH 5.0. To study the effects of pH (5.0 and 7.0) and wounding on disease development, ginseng roots were grown hydroponically in Hoagland's solution. Lesions were significantly larger (P < 0.001) at pH 5.0 compared with pH 7.0 and wounding enhanced disease by a highly virulent isolate at both pHs. In artificially infested soil, 2-year-old ginseng roots were most susceptible to Cylindrocarpon root rot among all root ages tested (1 to 4 years) when evaluated using a combined scale of disease incidence and severity. Root rot severity was significantly (P < 0.002) enhanced by increasing the inoculum density from 3.45 × 102 CFU/g of soil to 1.86 × 103 CFU/g of soil. Disease severity was higher at 20°C compared with 15 and 25°C and at -0.02 MPa soil moisture compared with -0.005 and -0.001 MPa. A significant interaction between soil moisture and temperature was observed for root rot severity.
Qualification of a Plant Disease Simulation Model: Performance of the LATEBLIGHT Model Across a Broad Range of Environments
Authors: Andrade-Piedra Jorge L. , Forbes Gregory A. , Shtienberg Dani , Grünwald Niklaus J. , Chacón María G. , Taipe Marco V. , Hijmans Robert J. , Fry William E.
Published: May 2007

The concept of model qualification, i.e., discovering the domain over which a validated model may be properly used, was illustrated with LATEBLIGHT, a mathematical model that simulates the effect of weather, host growth and resistance, and fungicide use on asexual development and growth of Phytophthora infestans on potato foliage. Late blight epidemics from Ecuador, Mexico, Israel, and the United States involving 13 potato cultivars (32 epidemics in total) were compared with model predictions using graphical and statistical tests. Fungicides were not applied in any of the epidemics. For the simulations, a host resistance level was assigned to each cultivar based on general categories reported by local investigators. For eight cultivars, the model predictions fit the observed data. For four cultivars, the model predictions overestimated disease, likely due to inaccurate estimates of host resistance. Model predictions were inconsistent for one cultivar and for one location. It was concluded that the domain of applicability of LATEBLIGHT can be extended from the range of conditions in Peru for which it has been previously validated to those observed in this study. A sensitivity analysis showed that, within the range of values observed empirically, LATEBLIGHT is more sensitive to changes in variables related to initial inoculum and to weather than to changes in variables relating to host resistance.
Nucleotide Sequencing, Whitefly Transmission, and Screening Tomato for Resistance Against Two Newly Described Begomoviruses in Bangladesh
Authors: Maruthi M. N. , Alam S. N. , Kader K. A. , Rekha A. R. , Cork A. , Colvin J.
Published: May 2007

The molecular diversity of Tomato leaf curl viruses (ToLCVs), from the two main tomato growing areas of Jessore and Joydebpur, Bangladesh, was investigated. The viral DNA was amplified from tomato plants exhibiting mild and severe symptoms by polymerase chain reaction, and the complete genomes of the ToLCVs were sequenced. An isolate of the bipartite Tomato leaf curl New Delhi virus-Severe (ToLCNDV-Svr) was associated with the severe symptom phenotype from Jessore (ToLCNDV-Svr[Jes]). A previously undescribed monopartite virus, designated Tomato leaf curl Joydebpur virus-Mild (ToLCJV-Mld), was sequenced from plants showing mild symptoms. ToLCNDV-Svr[Jes] was most closely related to ToLCNDV-[Lucknow] at 95.7% nucleotide (nt) identity and Tomato leaf curl Gujarat virus-[Varanasi] at 90.6% nt identity, based on DNA-A and -B component sequences. ToLCJV-Mld was similar to Pepper leaf curl Bangladesh virus at 87.1% DNA-A nt identity. Identification of ToLCNDV-Svr[Jes] and ToLCJV-Mld was in addition to the previously described Tomato leaf curl Bangladesh virus, with which they shared 73.2 and 86.0% DNA-A nt identities, thus demonstrating the existence of at least three distinct viruses infecting tomato in Bangladesh. Nucleotide identities and placement in phylogenetic trees suggested that the three ToLCVs may have had different evolutionary pathways. The whitefly, Bemisia tabaci, transmitted the viruses of this study equally efficiently. Four tomato cultivars (TLB111, TLB130, TLB133, and TLB182) resistant/ tolerant to South Indian ToLCV were screened against the Bangladesh ToLCVs in 2003-04. Although challenged by diverse viruses and potentially mixed infections, disease incidence remained low (6 to 45%) in the resistant cultivars compared with local cultivars (68 to 100%).
Serological Comparison and Molecular Characterization for Verification of Calla lily chlorotic spot virus as a New Tospovirus Species Belonging to Watermelon silver mottle virus Serogroup
Authors: Lin Yu-Hsuan , Chen Tsung-Chi , Hsu Hei-Ti , Liu Fang-Lin , Chu Fang-Hua , Chen Ching-Chung , Lin Yu-Zhu , Yeh Shyi-Dong
Published: May 2007

Calla lily chlorotic spot virus (CCSV) isolated from central Taiwan was recently identified as a tospovirus serologically but distantly related to Watermelon silver mottle virus (WSMoV). To clarify the serological relationship between the two viruses, rabbit polyclonal antibody (PAb) to CCSV and mouse monoclonal antibodies (MAbs) to WSMoV NP or CCSV NP were produced in this investigation, using purified nucleocapsid protein (NP) as immunogens. The PAb to CCSV NP reacted stronger with the homologous antigen than with the heterologous antigen, with much lower A405 readings in indirect enzyme-linked immunosorbent assay (ELISA) and low-intensity banding in immunoblotting. MAbs produced to CCSV NP or WSMoV NP reacted specifically with the homologous antigens but not with the heterologous antigens in both ELISA and immunoblot analyses. The CCSV S RNA was determined to be 3,172 nucleotides in length, with an inverted repeat at the 5′ and 3′ ends and two open reading frames encoding the NP and a nonstructural (NSs) protein in an ambisense arrangement. A typical 3′-terminal sequence (5′-AUUGCUCU-3′) that is shared by all members of the genus Tospovirus also is present in the CCSV S RNA. The CCSV NP and NSs protein share low amino acid identities of 20.1 to 65.1% and 19.9 to 66.1%, respectively, with those of reported tospoviruses. Phylogenetic dendrogram analysis indicates that CCSV is a distinct member in the genus Tospovirus. The results provide evidence that CCSV is a new species in the genus Tospovirus and belongs to WSMoV serogroup.