bluuebunny/crossref_metadata_2025 huggingface dataset:
In Silico and In Vivo Evaluation of the Maqui Berry (Aristotelia chilensis (Mol.) Stuntz) on Biochemical Parameters and Oxidative Stress Markers in a Metabolic Syndrome Model
Authors: Castillo-García Emily Leonela , Cossio-Ramírez Ana Lizzet , Córdoba-Méndez Óscar Arturo , Loza-Mejía Marco A. , Salazar Juan Rodrigo , Chávez-Gutiérrez Edwin , Bautista-Poblet Guadalupe , Castillo-Mendieta Nadia Tzayaka , Moreno Diego A. , García-Viguera Cristina , Pinto-Almazán Rodolfo , Almanza-Pérez Julio César , Gallardo Juan Manuel , Guerra-Araiza Christian
Published: December 2023

Metabolic syndrome (MetS) is a complex disease that includes metabolic and physiological alterations in various organs such as the heart, pancreas, liver, and brain. Reports indicate that blackberry consumption, such as maqui berry, has a beneficial effect on chronic diseases such as cardiovascular disease, obesity, and diabetes. In the present study, in vivo and in silico studies have been performed to evaluate the molecular mechanisms implied to improve the metabolic parameters of MetS. Fourteen-day administration of maqui berry reduces weight gain, blood fasting glucose, total blood cholesterol, triacylglycerides, insulin resistance, and blood pressure impairment in the diet-induced MetS model in male and female rats. In addition, in the serum of male and female rats, the administration of maqui berry (MB) improved the concentration of MDA, the activity of SOD, and the formation of carbonyls in the group subjected to the diet-induced MetS model. In silico studies revealed that delphinidin and its glycosylated derivatives could be ligands of some metabolic targets such as α-glucosidase, PPAR-α, and PPAR-γ, which are related to MetS parameters. The experimental results obtained in the study suggest that even at low systemic concentrations, anthocyanin glycosides and aglycones could simultaneously act on different targets related to MetS. Therefore, these molecules could be used as coadjuvants in pharmacological interventions or as templates for designing new multitarget molecules to manage patients with MetS.
Cubic AgBiS2 Powder Prepared Using a Facile Reflux Method for Photocatalytic Degradation of Dyes
Authors: Wang Wenzhen , Gao Chengxiong , Chen Yuxing , Shen Tao , Dong Mingrong , Yao Bo , Zhu Yan
Published: December 2023

The ternary chalcogenide AgBiS2 has attracted widespread attention in the field of photovoltaic and photoelectric devices due to its excellent properties. In this study, AgBiS2 powders with an average diameter of 200 nm were prepared via a simple and convenient reflux method from silver acetate, bismuth nitrate pentahydrate, and n-dodecyl mercaptan. The adjustment of the ratios of Ag:Bi:S raw materials and of the reaction temperatures were carried out to investigate the significance of the synthesis conditions toward the composition of the as-synthesized AgBiS2. The results of XRD indicated that the powders synthesized at a ratio of 1.05:1:2.1 and a synthesis temperature of 225 °C have the lowest bismuth content and the highest purity. The synthesized AgBiS2 crystallizes in a rock salt type structure with the cubic Fm3¯m space group. Scanning and transmission electron microscopy, thermogravimetric analysis, ultraviolet–visible–near-infrared spectra, and photocatalytic degradation performance were employed to characterize the as-synthesized samples. The results demonstrated that AgBiS2 powders display thermal stability; strong absorption in the ultraviolet, visible, and partial infrared regions; and an optical bandgap of 0.98 eV. The obtained AgBiS2 powders also have a good degradation effect on the methylene blue solution with a degradation efficiency of 58.61% and a rate constant of 0.0034 min−1, indicating that it is an efficient strategy for sewage degradation to reduce water pollution.
A Novel SiC Trench MOSFET with Self-Aligned N-Type Ion Implantation Technique
Authors: Wang Baozhu , Xu Hongyi , Ren Na , Wang Hengyu , Huang Kai , Sheng Kuang
Published: December 2023

We propose a novel silicon carbide (SiC) self-aligned N-type ion implanted trench MOSFET (NITMOS) device. The maximum electric field in the gate oxide could be effectively reduced to below 3 MV/cm with the introduction of the P-epi layer below the trench. The P-epi layer is partially counter-doped by a self-aligned N-type ion implantation process, resulting in a relatively low specific on-resistance (Ron,sp). The lateral spacing between the trench sidewall and N-implanted region (Wsp) plays a crucial role in determining the performance of the SiC NITMOS device, which is comprehensively studied through the numerical simulation. With the Wsp increasing, the SiC NITMOS device demonstrates a better short-circuit capability owing to the reduced saturation current. The gate-to-drain capacitance (Cgd) and gate-to-drain charge (Qgd) are also investigated. It is observed that both Cgd and Qgd decrease as the Wsp increases, owing to the enhanced screen effect. Compared to the SiC double-trench MOSFET device, the optimal SiC NITMOS device exhibits a 79% reduction in Cgd, a 38% decrease in Qgd, and a 41% reduction in Qgd × Ron,sp. A higher switching speed and a lower switching loss can be achieved using the proposed structure.
A Rapid Prototyping Approach for Multi-Material, Reversibly Sealed Microfluidics
Authors: Halwes Michael , Stamp Melanie , Collins David J.
Published: December 2023

Microfluidic organ-on-chip models recapitulate increasingly complex physiological phenomena to study tissue development and disease mechanisms, where there is a growing interest in retrieving delicate biological structures from these devices for downstream analysis. Standard bonding techniques, however, often utilize irreversible sealing, making sample retrieval unfeasible or necessitating destructive methods for disassembly. To address this, several commercial devices employ reversible sealing techniques, though integrating these techniques into early-stage prototyping workflows is often ignored because of the variation and complexity of microfluidic designs. Here, we demonstrate the concerted use of rapid prototyping techniques, including 3D printing and laser cutting, to produce multi-material microfluidic devices that can be reversibly sealed. This is enhanced via the incorporation of acrylic components directly into polydimethylsiloxane channel layers to enhance stability, sealing, and handling. These acrylic components act as a rigid surface separating the multiple mechanical seals created between the bottom substrate, the microfluidic features in the device, and the fluidic interconnect to external tubing, allowing for greater design flexibility. We demonstrate that these devices can be produced reproducibly outside of a cleanroom environment and that they can withstand ~1 bar pressures that are appropriate for a wide range of biological applications. By presenting an accessible and low-cost method, we hope to enable microfluidic prototyping for a broad range of biomedical research applications.
Analysis of Experience in the Use of Micro- and Nanoadditives from Silicon Production Waste in Concrete Technologies
Authors: Karlina Antonina I. , Karlina Yuliya I. , Gladkikh Vitaliy A.
Published: December 2023

The integration of nanotechnology across various industries has significantly enhanced product quality and manufacturing technologies for diverse materials. Within the construction sector, the adoption of nanomaterials has sparked the advent of innovative construction methods. Extensive studies have been conducted on various nanomaterials, particularly micro- and nanosilica, exploring their use as partial substitutes for cement in concrete formulations. This study aimed to furnish a comprehensive overview of silica’s impact on concrete properties in civil engineering and road construction. Environmental concerns and potential hazards necessitate the development of strategies for managing industrial by-products. Metallurgical processes generate several such by-products, among which is silica fume—a residue from smelting in the silicon and ferrosilicon industries. Waste silica dust and slurries have proven highly effective in creating high-strength, high-performance concrete. The study presents a literature review focusing on micro- and nanosilica derived from production waste at ferroalloy and silicon plants. It includes a comparative analysis of the primary characteristics of microsilica from various sources and examines the extensive use of microsilica as a modifying additive in building materials. Analyzing different concrete compositions with and without fumed silica determined the ranges of results for each indicator. The incorporation of micro- and nanosilica into the concrete mix demonstrated its efficacy. The morphology of waste silica particles, characterized by the smooth and spherical surfaces of micro- and nanosilica particles, significantly influences the workability properties of the concrete.
Method for the Analysis of Respirable Airborne Particulates on Filter Using the Mineral Liberation Analyser
Authors: LaBranche Nikky , Wightman Elaine , Teale Kellie , Johnstone Kelly , Cliff David
Published: December 2023

In recent years, the Mineral Liberation Analyser (MLA) has played a pivotal role in analysing respirable and inhalable ambient air samples collected on filters from both underground coal and metalliferous mines. Leveraging backscattered electron (BSE) image analysis and X-ray mineral identification, the MLA offers automated quantitative mineral characterization. The escalating prevalence and severity of mine dust lung diseases, particularly among young miners, have reignited interest in comprehensively understanding the dust’s characterization, encompassing mineralogy, particle size, and shape. Merely measuring total respirable dust exposure and its duration based on gravimetrically determined weight is no longer deemed sufficient in addressing the evolving landscape of occupational health challenges in mining environments. Since the publication of previous studies, efforts have been dedicated to refining the Mineral Liberation Analyser (MLA) methodology for respirable dust sampling. This refinement, discussed in detail in this paper, encompasses various enhancements, such as the implementation of data checks to identify carbon contamination, backscattered electron (BSE) drift, and the misclassification of X-ray spectra. Additionally, an examination of sampling efficiency led to the exploration of using smaller samples as an alternative to the time-intensive analysis of entire filters. Furthermore, this paper presents a reanalysis of paired filter sample sets previously reported using the Sarver Group Methodology. These samples are subjected to analysis using the Mineral Liberation Analyser, providing a more detailed illustration of the outputs derived from the updated methodology and compared to previously published MLA data.
Antimicrobial Activity and Mechanisms of Walnut Green Husk Extract
Authors: Wang Lei , Li Wenjing , Li Xuanyue , Liu Jiancheng , Chen Yong
Published: December 2023

Walnut green husks (WGHs), by-products of walnut production, are believed to possess antimicrobial properties, making them a potential alternative to antibiotics. In this study, the antibacterial activities of three extracts, derived from WGH, against Staphylococcus aureus, Bacillus subtilis, and Escherichia coli were investigated, and the antibacterial mechanisms of an anhydrous ethanol extract of WGH (WGHa) were examined. The results showed that WGHa exhibited inhibitory effects on all tested bacteria. The ultrahigh-performance liquid chromatography–tandem mass spectrometry analysis revealed that the major active compounds present in WGHa were terpenoids, phenols, and flavonoids. Treatment with WGHa resulted in the leakage of intracellular ions and alkaline phosphatase; a reduction in intracellular ATP content, ATPase activity, and nucleic acid content; as well as cellular metabolic viability. The transmission electron microscopy images showed varying degrees of cell deformation and membrane damage following WGHa treatment. The transcriptome sequencing and differentially expressed gene enrichment analyses revealed an up-regulation in pathways associated with RNA degradation, translation, protein export, and oxidative phosphorylation. Conversely, pathways involved in cell movement and localization, as well as cell wall organization and carbohydrate transport, were found to be down-regulated. These findings suggest that WGHa alters cell membrane permeability and causes damage to the cell wall. Additionally, WGHa interferes with cellular energy metabolism, compromises RNA integrity, and induces DNA replication stress, consequently inhibiting the normal growth and proliferation of bacteria. These findings unveiled the antimicrobial mechanisms of WGHa, highlighting its potential application as an antibiotic alternative.
Chemometric Evaluation of RI-Induced Phytochemicals in Phaseolus vulgaris Seeds Indicate an Improvement on Liver Enzymes in Obese Rats
Authors: Herrera Mayra Denise , Pérez-Ramírez Iza Fernanda , Reynoso-Camacho Rosalía , Reveles-Torres Luis Roberto , Servín-Palestina Miguel , Granados-López Angelica Judith , Reyes-Estrada Claudia Araceli , López Jesús Adrián
Published: December 2023

Liver enzymes alterations (activity or quantity increase) have been recognized as biomarkers of obesity-related abnormal liver function. The intake of healthy foods can improve the activity of enzymes like aspartate and alanine aminotransferases (AST, ALT), γ-glutaminyl transferase (GGT), and alkaline phosphatase (ALP). Beans have a high concentration of several phytochemicals; however, Restriction Irrigation (RI) during plant development amends their synthesis. Using chemometric tools, we evaluated the capacity of RI-induced phytochemicals to ameliorate the high activity of liver enzymes in obese rats. The rats were induced with a high-fat diet for 4 months, subsequently fed with 20% cooked beans from well-watered plants (100/100), or from plants subjected to RI at the vegetative or reproduction stage (50/100, 100/50), or during the whole cycle (50/50) for 3 months. A partial least square discriminant analysis indicated that mostly flavonols have a significant association with serum AST and ALT activity, while isoflavones lowered GGT and ALP. For AST and ALT activity in the liver, saponins remained significant for hepatocellular protection and flavonoids remained significant as hepatobiliary protectants by lowering GGT and ALP. A principal component analysis demonstrated that several flavonoids differentiated 100/50 treatment from the rest, while some saponins were correlated to 50/100 and 50/50 treatments. The intake of beans cultivated under RI improves obesity-impaired liver alterations.
Application of Sorbent-Based Extraction Techniques in Food Analysis
Authors: Drabińska Natalia , Marcinkowska Monika A. , Wieczorek Martyna N. , Jeleń Henryk H.
Published: December 2023

This review presents an outline of the application of the most popular sorbent-based methods in food analysis. Solid-phase extraction (SPE) is discussed based on the analyses of lipids, mycotoxins, pesticide residues, processing contaminants and flavor compounds, whereas solid-phase microextraction (SPME) is discussed having volatile and flavor compounds but also processing contaminants in mind. Apart from these two most popular methods, other techniques, such as stir bar sorptive extraction (SBSE), molecularly imprinted polymers (MIPs), high-capacity sorbent extraction (HCSE), and needle-trap devices (NTD), are outlined. Additionally, novel forms of sorbent-based extraction methods such as thin-film solid-phase microextraction (TF-SPME) are presented. The utility and challenges related to these techniques are discussed in this review. Finally, the directions and need for future studies are addressed.
NMR and Docking Calculations Reveal Novel Atomistic Selectivity of a Synthetic High-Affinity Free Fatty Acid vs. Free Fatty Acids in Sudlow’s Drug Binding Sites in Human Serum Albumin
Authors: Venianakis Themistoklis , Primikyri Alexandra , Opatz Till , Petry Stefan , Papamokos Georgios , Gerothanassis Ioannis P.
Published: December 2023

Saturation transfer difference (STD), inter-ligand NOEs (INPHARMA NMR), and docking calculations are reported for investigating specific binding sites of the high-affinity synthetic 7-nitrobenz-2-oxa-1,3-diazoyl-4-C12 fatty acid (NBD-C12 FA) with non-labeled human serum albumin (HSA) and in competition with the drugs warfarin and ibuprofen. A limited number of negative interligand NOEs between NBD-C12 FA and warfarin were interpreted in terms of a short-range allosteric competitive binding in the wide Sudlow’s binding site II (FA7) of NBD-C12 FA with Ser-202, Lys-199, and Trp-214 and warfarin with Arg-218 and Arg-222. In contrast, the significant number of interligand NOEs between NBD-C12 FA and ibuprofen were interpreted in terms of a competitive binding mode in Sudlow’s binding site I (FA3 and FA4) with Ser-342, Arg-348, Arg-485, Arg-410, and Tyr-411. NBD-C12 FA has the unique structural properties, compared to short-, medium-, and long-chain saturated and unsaturated natural free fatty acids, of interacting with well-defined structures with amino acids of both the internal and external polar anchor sites in Sudlow’s binding site I and with amino acids in both FA3 and FA4 in Sudlow’s binding site II. The NBD-C12 FA, therefore, interacts with novel structural characteristics in the drug binding sites I and II and can be regarded as a prototype molecule for drug development.
Sequential Extraction and Attenuated Total Reflection–Fourier Transform Infrared Spectroscopy Monitoring in the Biorefining of Brewer’s Spent Grain
Authors: Belardi Ilary , Marrocchi Assunta , Alfeo Vincenzo , Sileoni Valeria , De Francesco Giovanni , Paolantoni Marco , Marconi Ombretta
Published: December 2023

The brewing industry plays a significant role in producing a substantial annual volume of by-products, which contributes to the global accumulation of food waste. The primary by-product generated is brewer’s spent grain (BSG), a lignocellulosic biomass rich in proteins, fiber, and moisture content. Leveraging biorefining and valorization techniques for BSG represents a promising strategy to enhance sustainability, resilience, and circularity within the brewing chain. To date, most studies have focused on extracting proteins from BSG. Yet, it is crucial to note that the fiber part of BSG also holds considerable potential for biorefining processes. This study introduces a novel sequential extraction method designed to integrally recover the major components of BSG. Notably, it introduces a reactive extraction approach that enables the simultaneous extraction and tuneable functionalization of the hemicellulose component. Additionally, the study assesses the utility of the attenuated total reflection–Fourier transform infrared (ATR-FTIR) spectroscopy as a user-friendly tool to monitor and evaluate the effectiveness of the fractionation process. This spectroscopic technique can provide valuable insights into the changes and composition of BSG throughout the extraction process.
Nucleotides as Bacterial Second Messengers
Authors: Cancino-Diaz Mario E. , Guerrero-Barajas Claudia , Betanzos-Cabrera Gabriel , Cancino-Diaz Juan C.
Published: December 2023

In addition to comprising monomers of nucleic acids, nucleotides have signaling functions and act as second messengers in both prokaryotic and eukaryotic cells. The most common example is cyclic AMP (cAMP). Nucleotide signaling is a focus of great interest in bacteria. Cyclic di-AMP (c-di-AMP), cAMP, and cyclic di-GMP (c-di-GMP) participate in biological events such as bacterial growth, biofilm formation, sporulation, cell differentiation, motility, and virulence. Moreover, the cyclic-di-nucleotides (c-di-nucleotides) produced in pathogenic intracellular bacteria can affect eukaryotic host cells to allow for infection. On the other hand, non-cyclic nucleotide molecules pppGpp and ppGpp are alarmones involved in regulating the bacterial response to nutritional stress; they are also considered second messengers. These second messengers can potentially be used as therapeutic agents because of their immunological functions on eukaryotic cells. In this review, the role of c-di-nucleotides and cAMP as second messengers in different bacterial processes is addressed.
Synthesis, Characterization, and Reactivity Studies of New Cyclam-Based Y(III) Complexes
Authors: Madeira Filipe , Veiros Luis F. , Alves Luis G. , Martins Ana M.
Published: December 2023

[(Bn2Cyclam)Y(N(SiMe3)2)] was prepared by reaction of H2Bn2Cyclam with Y[N(SiMe3)2]3. The protonation of the macrocycle ligand in [(Bn2Cyclam)Y(N(SiMe3)2)] is observed upon reaction with [HNMe3][BPh4] leading to the formation of [(HBn2Cyclam)Y(N(SiMe3)2)][BPh4]. DFT analysis of [(Bn2Cyclam)Y(N(SiMe3)2)] showed that the HOMO is located on the anionic nitrogen atoms of the cyclam ring indicating that protonation follows orbital control. Addition of H2Bn2Cyclam and H2(3,5-tBu2Bn)2Cyclam to a 1:3 mixture of YCl3 and LiCH2SiMe3 in THF resulted in the formation of [((C6H4CH2)BnCyclam)Y(THF)(µ-Cl)Li(THF)2] and [Y{(η3-3,5-tBu2Bn)2Cyclam}Li(THF)], respectively. The reaction of H23,5-tBu2Bn2Cyclam with Y(CH2SiMe3)3(THF)2 was studied and monitored by a temperature variation NMR experiment revealing the formation of [(3,5-tBu2Bn2Cyclam)Y(CH2SiMe3)]. Preliminary catalytic assays have shown that [Y{(η3-3,5-tBu2Bn)2Cyclam}Li(THF)] is a very efficient catalyst for the intramolecular hydroamination of 2,2-diphenyl-pent-4-enylamine.
The Role of MWCNTs in Enhancing the Foam Stability and Rheological Behavior of Cement Pastes That Contain Air-Entraining and Superplasticizer Admixtures
Authors: Pundienė Ina , Pranckevičienė Jolanta
Published: December 2023

This research delves into the intricate dynamics between multi-walled carbon nanotubes (MWCNTs), air-entraining admixtures (AEAs), and a range of superplasticizers (SPs) in cementitious systems, shedding light on key aspects of construction material innovation. The focus is on how MWCNTs, AEAs, and specific SPs—namely, lignosulfonate (LS), polycarboxylate (PCE), and polyacrylate (PA)—influence the stability of foams and the viscosity and setting times of cement pastes. To assess the impacts of these components, we employed foam stability assessments, viscosity measurement techniques, electrical conductivity analysis, and evaluations of dispersion and setting times. Results indicate that MWCNTs enhance foam stability and viscosity, with the degree of improvement contingent on the type and concentration of SPs and the presence of AEAs. Notably, SPs, particularly PCE and PA, markedly influence the properties of cement paste, including increasing dispersion values and modulating setting times, especially when combined with MWCNTs and AEAs. The study concludes that strategically combining MWCNTs with specific SPs and AEAs alters the physical properties of cementitious materials significantly, underscoring the potential for customizing material design in the construction sector.
A Self-Powered Flexible Displacement Sensor Based on Triboelectric Effect for Linear Feed System
Authors: Zhao Tingting , Li Dongsheng , Cui Peijuan , Zhang Zhongbin , Sun Yuyang , Meng Xingyou , Hou Zhanlin , Zheng Zaiping , Huang Yuping , Liu Huicong
Published: December 2023

The detection and feedback of displacement and velocity significantly impact the control accuracy of the linear feed system. In this study, we propose a flexible and self-powered displacement sensor based on the triboelectric effect, designed for seamless integration into linear feed systems. The displacement sensor comprises two parts, the mover and stator, operating in a sliding mode. This sensor can precisely detect the displacement of the linear feed system with a large detection range. Additionally, the sensor is capable of real-time velocity detection of linear feed systems, with an error rate below 0.5%. It also offers advantages, such as excellent flexibility, compact size, stability, easy fabrication, and seamless integration, with linear feed systems. These results highlight the potential of the self-powered displacement sensor for various applications in linear feed systems.
Plastic, It’s What’s for Dinner: A Preliminary Comparison of Ingested Particles in Bottlenose Dolphins and Their Prey
Authors: Hart Leslie B. , Dziobak Miranda , Wells Randall S. , Berens McCabe Elizabeth , Conger Eric , Curtin Tita , Knight Maggie , Weinstein John
Published: December 2023

Microplastic ingestion was reported for common bottlenose dolphins (Tursiops truncatus) inhabiting Sarasota Bay, FL, USA, a community that also has prevalent exposure to plasticizers (i.e., phthalates) at concentrations higher than human reference populations. Exposure sources are currently unknown, but plastic-contaminated prey could be a vector. To explore the potential for trophic exposure, prey fish muscle and gastrointestinal tract (GIT) tissues and contents were screened for suspected microplastics, and particle properties (e.g., color, shape, surface texture) were compared with those observed in gastric samples from free-ranging dolphins. Twenty-nine fish across four species (hardhead catfish, Ariopsis felis; pigfish, Orthopristis chrysoptera; pinfish, Lagodon rhomboides; and Gulf toadfish, Opsanus beta) were collected from Sarasota Bay during September 2022. Overall, 97% of fish (n = 28) had suspected microplastics, and GIT abundance was higher than muscle. Fish and dolphin samples contained fibers and films; however, foams were common in dolphin samples and not observed in fish. Suspected tire wear particles (TWPs) were not in dolphin samples, but 23.1% and 32.0% of fish muscle and GIT samples, respectively, contained at least one suspected TWP. While some similarities in particles were shared between dolphins and fish, small sample sizes and incongruent findings for foams and TWPs suggest further investigation is warranted to understand trophic transfer potential.
Tunable, Nonmechanical, Fractional Talbot Illuminators
Authors: Gómez-Sarabia Cristina M. , Ojeda-Castañeda Jorge
Published: December 2023

Inside an optical Fourier processor, we inserted a varifocal system to continuously magnify the frequency of a master grating. The proposed system does not involve any mechanical compensation for scaling the Fourier spectrum. As the magnification, M, varies, the Fourier spectrum remains at the same initial location. We identified a previously unknown quadratic phase factor for generating, in the fixed output plane, Talbot images of any fractional order. We applied this result to setting a structured illumination beam, which does not have occluding regions. This illuminating beam can be useful for Talbot interferometry.
Novel Insights into the Pathogenesis of Human Post-Primary Tuberculosis from Archival Material of the Pre-Antibiotic Era, 1931–1947
Authors: Riaz Syeda Mariam , Hanevik Kurt , Helgeland Lars , Sviland Lisbet , Hunter Robert L. , Mustafa Tehmina
Published: December 2023

Objectives: Primary and post-primary tuberculosis (TB) are distinct entities. The aim of this study was to study the histopathology of primary and post-primary TB by using the unique human autopsy material from the pre-antibiotic era, 1931–1947. Material and Methods: Autopsy data were collected from the autopsy journals, and the human tissue was collected from the pathology archives at the Department of Pathology, the Gades Institute. Results: Histological presentations of TB lesions showed great diversity within a single lung. Post-primary TB starts as a pneumonia forming early lesions, characterized by the infiltration of foamy macrophages containing mycobacterial antigens within alveoli, and progressing to necrotic pneumonias with an increasing density of mycobacterial antigens in the lesions. These necrotic pneumonic lesions appeared to either resolve as fibrocaseous lesions or lead to cavitation. The typical granulomatous inflammation, the hallmark of TB lesions, appeared later in the post-primary TB and surrounded the pneumonic lesions. These post-primary granulomas contained lesser mycobacterial antigens as compared to necrotic pneumonia. Conclusions: Immunopathogenesis of post-primary TB is different from primary TB and starts as pneumonia. The early lesions of post-primary TB may progress or regress, holding the key to understanding how a host can develop the disease despite an effective TB immunity.
Cranberry Proanthocyanidins Mitigate Reflux-Induced Transporter Dysregulation in an Esophageal Adenocarcinoma Model
Authors: Zhang Yun , Weh Katherine M. , Tripp Bridget A. , Clarke Jennifer L. , Howard Connor L. , Sunilkumar Shruthi , Howell Amy B. , Kresty Laura A.
Published: December 2023

We recently reported that cranberry proanthocyanidins (C-PACs) inhibit esophageal adenocarcinoma (EAC) by 83% through reversing reflux-induced bacterial, inflammatory and immune-implicated proteins and genes as well as reducing esophageal bile acids, which drive EAC progression. This study investigated whether C-PACs’ mitigation of bile reflux-induced transporter dysregulation mechanistically contributes to EAC prevention. RNA was isolated from water-, C-PAC- and reflux-exposed rat esophagi with and without C-PAC treatment. Differential gene expression was determined by means of RNA sequencing and RT-PCR, followed by protein assessments. The literature, coupled with the publicly available Gene Expression Omnibus dataset GSE26886, was used to assess transporter expression levels in normal and EAC patient biopsies for translational relevance. Significant changes in ATP-binding cassette (ABC) transporters implicated in therapeutic resistance in humans (i.e., Abcb1, Abcb4, Abcc1, Abcc3, Abcc4, Abcc6 and Abcc10) and the transport of drugs, xenobiotics, lipids, and bile were altered in the reflux model with C-PACs’ mitigating changes. Additionally, C-PACs restored reflux-induced changes in solute carrier (SLC), aquaporin, proton and cation transporters (i.e., Slc2a1, Slc7a11, Slc9a1, Slco2a1 and Atp6v0c). This research supports the suggestion that transporters merit investigation not only for their roles in metabolism and therapeutic resistance, but as targets for cancer prevention and targeting preventive agents in combination with chemotherapeutics.
Nutritionally Important Pro-Health Active Ingredients and Antioxidant Properties of Fruits and Fruit Juice of Selected Biennial Fruiting Rubus idaeus L. Cultivars
Authors: Chwil Mirosława , Matraszek-Gawron Renata , Kostryco Mikołaj , Różańska-Boczula Monika
Published: December 2023

Raspberry fruits are an important source of many biologically active chemical compounds exerting nutritional and pro-health effects. The study presents a comparative analysis of nutritionally important bioactive chemical compounds—polyphenols; flavonoids, including anthocyanins; vitamin C; amino acids; fatty acids; and primary metabolites—contained in the fruits of three biennial fruiting cultivars, R. idaeus ‘Glen Ample’, ‘Laszka’, and ‘Radziejowa’, i.e., common cultivars in Poland and Europe. The antioxidant activity of fresh fruits and juice was determined with five methods. The analyses revealed the strong free radical scavenging potential of the fruits and juice, confirmed by the high concentration of nutrients, e.g., polyphenols, anthocyanins, vitamin C, amino acids, and fatty acids. The antioxidant activity of the juice determined with the ferric reducing antioxidant power (FRAP) and OH radical methods was from 2.5 to 4.0 times higher than that of the fruits. The following orders of total polyphenol contents were established in the analyzed cultivars: ‘Glen Ample’ < ‘Laszka’ < ‘Radziejowa’ in the fruits and ‘Glen Ample’ < ‘Radziejowa’ < ‘Laszka’ in the juice. The highest antioxidant activity was exhibited by the ‘Radziejowa’ fruits. Given their high content of dietary fiber, the fruits of the analyzed raspberry cultivars can be consumed by dieting subjects. The concentrations of vitamin C (28–34 mg/100 g) and anthocyanins (20–34 mg/100 g) indicate the biological and pharmacological activity of these fruits. The main unsaturated fatty acids in the fruits were gamma-linoleic acid (C18:2n6c) and alpha-linolenic acid (C18:3n3), which neutralize excess free radicals. The amino acids nutritionally essential to humans were dominated by leucine, arginine, and phenylalanine. This is the first comparative analysis of the antioxidant activity of fruits and juice and the contents of selected active compounds in the fruits of biennial fruiting cultivars of R. idaeus, i.e., a highly commercialized crop in Europe.
Dendrimers for Drug Delivery: Where Do We Stand in 2023?
Authors: Apartsin Evgeny K.
Published: December 2023

Dendrimers are highly symmetric, hyperbranched macromolecules consisting of repeating structural units [...]
Variations in Lens Thickness Affecting the Anterior Chamber Length and Their Potential Measurement Using a Biometer
Authors: Povedano-Montero F. Javier , Bernardez-Villaboa Ricardo , Martínez-Florentín Gema , López-Muñoz Francisco , Cedrún-Sánchez Juan E.
Published: December 2023

Biometry is a critical aspect of ophthalmology, since it facilitates the measurement of several ocular parameters and aids in the diagnosis of conditions like glaucoma. The advent of the IOLMaster in 1999 marked a pivotal moment in biometry by introducing non-contact and highly precise measurements that revolutionized the field. Low-coherence optical reflectometry devices such as Lenstar LS900 and Aladdin have further advanced biometry, due to the exceptional accuracy they offer. Axial length, a fundamental measurement in biometry, directly correlates with conditions like myopia and glaucoma. The accurate measurement of axial length is crucial for diagnosis and treatment planning. Biometry also guides intraocular lens power calculation during cataract surgery, relying on factors like axial length, anterior chamber depth, lens thickness, and effective lens position (ELP). Ensuring precision in these measurements is essential for optimal surgical outcomes. While several studies have explored biometric parameters, dynamic changes in crystalline lens thickness during rest or accommodation have received little attention. These changes may have a significant effect on the measurement of the anterior chamber length, and consequently impact the overall biometric assessment. This study delves into dynamic biometry, particularly in the context of age-related presbyopia, and aims to assess the feasibility of incorporating into the biometric process a specialized device capable of accurately considering crystalline lens changes during different states like rest and accommodation. This exploration seeks to enhance the understanding of ocular dynamics and contribute to improving the precision of diagnostic and surgical techniques. It underscores the importance of staying at the forefront of biometric research, especially in the context of emerging technologies and their potential to transform ophthalmology.
Assessing Grain Quality Changes in White and Black Rice under Water Deficit
Authors: Brunet-Loredo Aloysha , López-Belchí María Dolores , Cordero-Lara Karla , Noriega Felipe , Cabeza Ricardo A. , Fischer Susana , Careaga Paula , Garriga Miguel
Published: December 2023

Rice is an essential diet component for a significant portion of the population worldwide. Due to the high water demand associated with rice production, improving water use efficiency and grain quality is critical to increasing the sustainability of the crop. This species includes rice varieties with diverse pigmentation patterns. Grain quality, including industrial, nutritional, and functional quality traits, of two black rice genotypes and a commercial white rice cultivar were evaluated in different locations and under different water regimes. Flooding produced higher grain weight compared to alternate wetting and drying irrigation. A high correlation was found between grain color, total phenolic content (TPC), and antioxidant activity. The black rice genotypes showed higher TPC levels and antioxidant capacity, mainly due to higher levels of cyanidin 3-O-glucoside. The phenolic profile varied between whole and polished grains, while mineral composition was influenced by location and irrigation regime. In turn, the environment influenced grain quality in terms of industrial and nutritional characteristics, with significant differences in quality between whole and polished grains. This study provides valuable information on the genotype–environment relationship in rice and its effect on grain quality, which could contribute to selecting genotypes for an appropriate environment.
Heterologous Expression of a Ferritin Homologue Gene PpFer1 from Prunus persica Enhances Plant Tolerance to Iron Toxicity and H2O2 Stress in Arabidopsis thaliana
Authors: Yang Yong , Zhang Jinjin , Li Mengyuan , Ning Youzheng , Tao Yifei , Shi Shengpeng , Dark Adeeba , Song Zhizhong
Published: December 2023

In plants, ferritin proteins play an important role in iron (Fe) storage which contributes to plant growth and development. However, the biological functions of ferritins in fruit trees are essentially unknown. In this study, three Ferritin genes were isolated from ‘Zhentong No. 3’ peach, which were named PpFer1-PpFer3. The expression levels of these genes were different in distinct tissues/organs. Notably, PpFer1 was the most abundantly expressed Ferritin family gene in all tested tissues of ‘Zhentong No. 3’ peach; its expression levels were significantly enhanced throughout the entire peach seedling under Fe toxicity and H2O2 stress, particularly in the leaves. In addition, over-expression of PpFer1 was effective in rescuing the retarded growth of Arabidopsis fer1-2 knockout mutant, embodied in enhanced fresh weight, primary root length, lateral root numbers, total root length, total leaf chlorophyll, stomatal conductance (Gs), net photosynthetic rate (Pn), transpiration rate, and tissue Fe concentration. This study provides insights into understanding the molecular mechanisms of Fe storage and sequestration in perennial fruit trees.
Ornamental Plants and Urban Gardening
Authors: Orlóci László , Fekete Albert
Published: December 2023

Urban green areas serve both the mental and physical health of the people living in the settlements; therefore, the ornamental plants used on green areas currently have a prominent role in reducing the effects of climate change and urbanization, as well as in providing ecosystem services. This is a dynamically changing, new field that requires close cooperation with several scientific fields, such as landscape architecture and plant physiology, genetics, plant breeding, and ecology. The monitoring and research of settlement communities as ecological systems greatly serves the perception of the effects of climate change and helps to mitigate them. The sustainability and economic operation of established urban green space systems can be made effective by applying innovative technologies. The Special Issue “Ornamental Plants and Urban Gardening” was launched in 2022 and published 13 articles on the topic until 31 July 2023. The published articles also have a very wide spectrum of topics, which also shows the diversity and the interdisciplinary nature of the scientific field. In the following, we present the main topics of the published articles and the results with which their authors contributed to the enrichment of the scientific field. We present a brief summary of the articles in shorter subsections.
Fine Structure of Plasmodesmata-Associated Membrane Bodies Formed by Viral Movement Protein
Authors: Atabekova Anastasia K. , Golyshev Sergei A. , Lezzhov Alexander A. , Skulachev Boris I. , Moiseenko Andrey V. , Yastrebova Daria M. , Andrianova Nadezda V. , Solovyev Ilya D. , Savitsky Alexander P. , Morozov Sergey Y. , Solovyev Andrey G.
Published: December 2023

Cell-to-cell transport of plant viruses through plasmodesmata (PD) requires viral movement proteins (MPs) often associated with cell membranes. The genome of the Hibiscus green spot virus encodes two MPs, BMB1 and BMB2, which enable virus cell-to-cell transport. BMB2 is known to localize to PD-associated membrane bodies (PAMBs), which are derived from the endoplasmic reticulum (ER) structures, and to direct BMB1 to PAMBs. This paper reports the fine structure of PAMBs. Immunogold labeling confirms the previously observed localization of BMB1 and BMB2 to PAMBs. EM tomography data show that the ER-derived structures in PAMBs are mostly cisterns interconnected by numerous intermembrane contacts that likely stabilize PAMBs. These contacts predominantly involve the rims of the cisterns rather than their flat surfaces. Using FRET-FLIM (Förster resonance energy transfer between fluorophores detected by fluorescence-lifetime imaging microscopy) and chemical cross-linking, BMB2 is shown to self-interact and form high-molecular-weight complexes. As BMB2 has been shown to have an affinity for highly curved membranes at cisternal rims, the interaction of BMB2 molecules located at rims of adjacent cisterns is suggested to be involved in the formation of intermembrane contacts in PAMBs.
Zuccagnia punctata Cav., a Potential Environmentally Friendly and Sustainable Bionematicide for the Control of Argentinean Horticultural Crops
Authors: Manrique Sofía , Gómez Jessica , Piñeiro Mauricio , Sampietro Belén Ariza , Peschiutta Maria L. , Tapia Alejandro , Simirgiotis Mario J. , Lima Beatriz
Published: December 2023

This research was designed to investigate the metabolite profiling, phenolics, and flavonoids content as well as the potential nematicidal properties of decoction (ZpDe), orange-yellow resin (ZpRe) and essential oil (ZpEO) from Argentinean medicinal plant Zuccagnia punctata Cav. Additionally, the antioxidant and antibacterial properties of ZpDe and ZpEO were determined. Metabolite profiling was obtained by an ultrahigh-resolution liquid chromatography MS analysis (UHPLC-ESI-QTOF/OT-MS-MS) and GCMS. The nematicidal activity was assayed by a standardized method against Meloidogyne incognita. The antioxidant properties were screened by four methods: (2,2-diphenyl-1-picrylhydrazyl assay (DPPH), Trolox equivalent antioxidant activity assay (TEAC), ferric-reducing antioxidant power assay (FRAP), and lipid peroxidation in erythrocytes (ILP). The antibacterial activity was evaluated according to the Clinical and Laboratory Standards Institute (CLSI) rules. The ZpDe, ZpRe and ZpEO displayed a strong nematicidal activity with an LC50 of 0.208, 0.017 and 0.142 mg/mL, respectively. On the other hand, the ZpDe showed a strong DPPH scavenging activity (IC50 = 28.54 µg/mL); ILP of 87.75% at 250 µg ZpDe/mL and moderated antimicrobial activity. The ZpEO showed promising activity against a panel of yeasts Candida albicans and non-albicans (ATCC and clinically isolated) with MIC values from 750 to 1500 µg/mL. The ZpDe showed a content of phenolics and flavonoid compounds of 241 mg GAE/g and 10 mg EQ/g, respectively. Fifty phenolic compounds were identified in ZpDe by ultrahigh-resolution liquid chromatography (UHPLC–PDA– Q-TOF-MS) analysis, while forty-six phenolic compounds were identified in ZpRe by UHPLC-ESI-Q-OT-MS-MS and twenty-nine in ZpEO using a GC-MS analysis, updating the knowledge on the chemical profile of this species. The results support and standardize this medicinal plant mainly as a potential environmentally friendly and sustainable bionematicide for the control of Argentinean horticultural crops including tomatoes and peppers and as a source of antimicrobial and antioxidant compounds which could be further explored and exploited for potential applications.
Damage Localization, Identification and Evolution Studies during Quasi-Static Indentation of CFRP Composite Using Acoustic Emission
Authors: Du Jinbo , Wang Han , Cheng Liang , Bi Yunbo , Yang Di
Published: December 2023

Quasi-static indentation (QSI) experiments are conducted to investigate the localization, identification and evolution of induced damage in laminate composite up to delamination initiation using acoustic emission (AE) techniques. In this study, we propose a continuous wavelet transform (CWT)-based damage localization method for composites, which can simultaneously identify two damage modes, namely matrix cracking and delamination. The experimental findings demonstrate that the proposed algorithm, which utilizes the arrival time difference within a specific frequency band of the AE signal, effectively reduces the average location error from 3.81% to 2.31% compared to the existing method. Furthermore, the average signal location time has significantly decreased from several minutes to a mere 2 s. Matrix cracking and delamination are identified based on the maximum frequency band of CWT. Both types of damage exhibit prominent peaks within the 40 kHz–50 kHz frequency range, indicating their shared nature as manifestations of matrix damage, albeit with distinct modes of presentation. The first damage pattern that occurs is matrix cracking, succeeded by delamination damage. The nonlinear phase of the mechanical response curve is associated with the rapid aggregation of matrix cracking. Before the onset of macroscopic delamination damage, microscopic delamination damage begins to accumulate. A concentration of high-energy delamination damage signals predicts the initiation of macroscopic delamination.
Poly(ethylene Glycol) Methyl Ether Methacrylate-Based Injectable Hydrogels: Swelling, Rheological, and In Vitro Biocompatibility Properties with ATDC5 Chondrogenic Lineage
Authors: Farrag Yousof , Ait Eldjoudi Djedjiga , Farrag Mariam , González-Rodríguez María , Ruiz-Fernández Clara , Cordero Alfonso , Varela-García María , Torrijos Pulpón Carlos , Bouza Rebeca , Lago Francisca , Pino Jesus , Alvarez-Lorenzo Carmen , Gualillo Oreste
Published: December 2023

Here, we present the synthesis of a series of chemical homopolymeric and copolymeric injectable hydrogels based on polyethylene glycol methyl ether methacrylate (PEGMEM) alone or with 2-dimethylamino ethyl methacrylate (DMAEM). The objective of this study was to investigate how the modification of hydrogel components influences the swelling, rheological attributes, and in vitro biocompatibility of the hydrogels. The hydrogels’ networks were formed via free radical polymerization, as assured by 1H nuclear magnetic resonance spectroscopy (1H NMR). The swelling of the hydrogels directly correlated with the monomer and the catalyst amounts, in addition to the molecular weight of the monomer. Rheological analysis revealed that most of the synthesized hydrogels had viscoelastic and shear-thinning properties. The storage modulus and the viscosity increased by increasing the monomer and the crosslinker fraction but decreased by increasing the catalyst. MTT analysis showed no potential toxicity of the homopolymeric hydrogels, whereas the copolymeric hydrogels were toxic only at high DMEAM concentrations. The crosslinker polyethylene glycol dimethacrylate (PEGDMA) induced inflammation in ATDC5 cells, as detected by the significant increase in nitric oxide synthase type II activity. The results suggest a range of highly tunable homopolymeric and copolymeric hydrogels as candidates for cartilage regeneration.