bluuebunny/crossref_metadata_2025 huggingface dataset:
Analysing Psychological Sentiment Prediction Across Modalities: Harnessing Emotion Datasets within Natural Language Processing (NLP)
Authors: Li Na , Kong Rong
Published: September 2024

Studying human emotions and feelings is a crucial element in the field of psychology, having significant implications such as evaluating mental health and improving human-computer interactions. Recently, there has been a rise in interest in examining how psychological sentiment can be predicted through various mediums, including text, audio, video, and physiological signals. By utilizing advancements in Natural Language Processing (NLP) and analysing multimodal data, this research delves into incorporating emotion datasets into NLP frameworks to improve psychological sentiment prediction. This presents present an applicability of some of the NLP techniques to predicts the Psychological Sentiment such as Deep Generating adversarial networks (D-GANs), Long short-term memory (LSTM) and gated recurrent unit (GRU). The sentimental analysis performed by the considered algorithms are implemented in python and the parameters which are considered for the results evaluation are model loss, confusion matrix, accuracy, precision, recall and f1-score. Our goal with this analysis is to offer a deeper understanding of the existing methodologies and future scope of growth in psychological sentiment prediction of research in the field of NLP.
Adversarial Sample Synthesis for Visual Question Answering
Authors: Li Chuanhao , Jing Chenchen , Li Zhen , Wu Yuwei , Jia Yunde
Published: September 2024

Language prior is a major block to improving the generalization of visual question answering (VQA) models. Recent work has revealed that synthesizing extra training samples to balance training sets is a promising way to alleviate language priors. However, most existing methods synthesize extra samples in a manner independent of training processes, which neglect the fact that the language priors memorized by VQA models are changing during training, resulting in insufficient synthesized samples. In this article, we propose an adversarial sample synthesis method, which synthesizes different adversarial samples by adversarial masking at different training epochs to cope with the changing memorized language priors. The basic idea behind our method is to use adversarial masking to synthesize adversarial samples that will cause the model to make wrong answers. To this end, we design a generative module to carry out adversarial masking by attacking the VQA model and introduce a bias-oriented objective to supervise the training of the generative module. We couple the sample synthesis with the training process of the VQA model, which ensures that the synthesized samples at different training epochs are beneficial to the VQA model. We incorporated the proposed method into three VQA models including UpDn, LMH, and LXMERT and conducted experiments on three datasets including VQA-CP v1, VQA-CP v2, and VQA v2. Experimental results demonstrate that a large improvement of our method, such as 16.22% gains on LXMERT in the overall accuracy of VQA-CP v2.
Improving Scene Text Retrieval via Stylized Middle Modality
Authors: Zhu Shipeng , Fang Jun , Fang Pengfei , Xue Hui
Published: September 2024

Scene text retrieval addresses the challenge of localizing and searching for all text instances within scene images based on a query text. This cross-modal task has significant applications in various domains, such as intelligent transportation systems and social media analysis. In practice, ensuring consistency of the same content between two modalities is crucial in improving retrieval accuracy. This article addresses the issue by introducing a stylized middle modality, which fuses the graphical query text with the style of the extracted text proposal. To this end, we propose a stylized middle modality learning (SM
2
L) framework. The proposed stylized middle modality enables the network to jointly enforce constraints on visual feature coherence and text semantic feature consistency in the optimization phase, thereby minimizing the modality gap in the retrieval space. This brings in two major advantages: (1) SM
2
L will pave the way to seamlessly benefit the scene text retrieval and (2) the proposed learning paradigm enables the machine to avoid adding redundant computing resources in the inference phase. Substantial experiments demonstrate that the proposed method outperforms the state-of-the-art retrieval performance considerably.
Bone marrow stromal cells enhance differentiation of acute myeloid leukemia induced by pyrimidine synthesis inhibitors
Authors: Smoljo Tomislav , Lalic Hrvoje , Dembitz Vilma , Tomic Barbara , Batinic Josip , Vrhovac Radovan , Bedalov Antonio , Visnjic Dora
Published: September 2024

This study is the first to demonstrate that human stromal cell lines and primary mesenchymal stromal cells from patients enhance the in vitro differentiation of acute myeloid leukemia (AML) cells induced by pyrimidine synthesis inhibitors, 5-aminoimidazole-4-carboxamide ribonucleoside (AICAr), and brequinar. Furthermore, this is the first report to show that AICAr affects mouse bone marrow stromal cells by activating AMP-activated protein kinase (AMPK) and that human stromal cells are superior to mouse cells for testing the effects of drugs on AML differentiation.
Impacts of Job Demands on Turnover Intention Among Registered Nurses in Hong Kong Public Hospitals: Exploring the Mediating Role of Burnout and Moderating Effect of Pay Level Satisfaction
Authors: Wong Ka Po , Zhang Bohan , Xie Yao Jie , Wong Frances Kam Yuet , Lai Claudia Kam Yuk , Chen Shu-Cheng , Qin Jing
Published: September 2024

Background: High turnover rates and burnout are prevalent issues among registered nurses in public hospitals in Hong Kong. Pay level satisfaction is one of the crucial factors influencing organisational and professional turnover intention. Understanding whether pay level satisfaction can mitigate the negative impact of burnout on turnover intention can provide insights into the role of financial rewards in employee retention.

Objective: This study aims to evaluate the relationship between job demands and turnover intention among registered nurses in Hong Kong public hospitals. Additionally, it seeks to examine the mediating role of burnout and explore the potential moderating effect of pay level satisfaction on the relationship between burnout and turnover intention.

Methods: The study was a cross‐sectional online survey of public hospital staff in Hong Kong. A total of 502 registered nurses who had worked at their employing facility for at least 6 months participated in this cross‐sectional survey. Study variables included work overload, job stress, work–family conflict, family–work conflict, conflict with other nurses, burnout, pay level satisfaction and turnover intention. The collected data were analysed using bivariate Pearson correlation analysis and mediated moderation analysis with the PROCESS macro in SPSS 28.0.

Results: Burnout mediated the relationship between job demands, including work overload, job stress, work–family conflict, family–work conflict and conflicts with nurses, and organisational and professional turnover intention. Pay level satisfaction did not exert a moderating influence on the relationship between job demands and turnover intention through burnout mediating this relationship.

Conclusions: The importance of addressing job stress and burnout to mitigate turnover intention and promote nurse retention is underscored. Contrary to expectations, pay level satisfaction did not buffer the negative impact of job demands on turnover intentions via burnout. This suggests that compensation alone may not be sufficient to offset the detrimental effects of high job demands and burnout on nurses’ intention to leave their jobs or the profession. Further research is warranted to explore potential moderators that may influence the relationship between job demands and turnover intention.
Molecular Biological Verification of the Healing Effect of Biphasic Microcurrent Electrical Stimulation in Model Rats of Skin Abrasion
Authors: Sakaguchi Akira , Sakaue Yuzuru , Haraguchi Shuhei , Hasegawa Daisuke , Tsukagoshi Rui , Kawaguchi Kotaro , Yamamoto Hideyuki
Published: September 2024

In this study, we investigated the effect of biphasic microcurrent electrical stimulation (b‐MES) on the epidermal healing process using a rat model of skin abrasion. We analyzed the expression levels of growth factors [fibroblast growth factor 2 (FGF2) and epidermal growth factor (EGF)] and keratin subtypes (K10) in both the b‐MES and control groups at different time points after wounding. The b‐MES group showed a significantly accelerated healing process of the epithelial tissue, resulting in more consistent healing as compared to the control group. A molecular biological analysis showed that the FGF2 mRNA expression level on Day 2 after wounding was significantly higher in the b‐MES group, whereas the EGF mRNA expression level on Days 1, 2, and 4 after wounding was significantly lower in the b‐MES group. Additionally, the K10 mRNA expression level on Days 1 and 2 after wounding was significantly higher in the b‐MES group. Our study findings suggest that b‐MES facilitates wound healing by regulating the growth factors. However, the precise mechanisms underlying these effects remain to be fully elucidated. Further research is needed to fully understand the therapeutic potential of b‐MES and its applications in clinical setting. Clinically, m‐MES requires shunting due to residual electrical charge at the application site. However, b‐MES alternates polarity, leaving no charge at the site of application. Therefore, b‐MES also has the advantage of being safer and allowing treatment for longer periods of time.
Computational Investigation of Corrosion Inhibition Properties of Hydrazine and Its Derived Molecules for Mild Steel
Authors: Gebremeskel Hiwet Meresa , Welearegay Meressa Abrha , Nadew Talbachew Tadesse
Published: September 2024

Corrosion of mild steel has gained a lot of attention by many industries and academia. This study was aimed to find the corrosion inhibition properties of hydrazine and its 11 derived molecules for mild steel using computational method, namely, the density functional theory with Beck 3‐parameter Lee Yang and Parr functional along with the 6‐311++G (d, p) basis set using simple quantum chemical parameters. The main quantum chemical parameters were energies of highest occupied and lowest unoccupied molecular orbitals and their energy gap, dipole moment, hardness, softness, electrophilicity index, the fractions of electrons transmitted, the change energy back‐donation, electron‐donating power, electron‐accepting power, molecular electrostatic potential, and Fukui function as well as polarizability. The results indicated that hydrazine derivatives have good anticorrosion nature which is consistent with the experimental findings. Out of the 12 target inhibitor molecules, N′‐(3‐nitrobenzylidene) hydrazine carbodithioic acid (NBHCA) and N′‐(4‐dimethylaminobenzylidene) hydrazine carbodithioic acid (DABHCA) are the most effective inhibitors. According to the value of the quantum chemical parameters, EHOMO, ΔEgap, Χ, η, σ, ε, ΔN, α, and ΔEb-d DABHCA showed the top effective anticorrosion inhibitor, and by the value of the quantum chemical parameters, ELUMO, TE, ω−, and ω+ NBHCA showed an effective anticorrosion inhibitor. The quantum chemical parameter data showed that NBHCA and DABHCA are nearly equivalent in their values, which is consistent with experimental values. Furthermore, a multiple‐linear regression equation was proposed as a quantitative structural activity relationship model to relate the calculated molecular descriptors of hydrazine derivatives to their experimental inhibition efficiencies obtained from literature. As a result, this model showed an excellent accuracy with an R‐squared of 0.924 and this uses to predict inhibition efficiencies of another molecules.
Optimizing Cardiac Resynchronization Therapy in Heart Failure Patients With Prolonged QRS Duration: Insights Into Electrical and Mechanical Dyssynchrony
Authors: Chen Zhisheng , Balmer Lois , Tan Xuerui
Published: September 2024

Heart failure (HF) represents a critical stage of cardiac disease, associated with high morbidity and mortality. Cardiac resynchronization therapy (CRT) has become a pivotal treatment for HF patients with prolonged QRS duration. This therapy employs a biventricular pacing system to correct cardiac electromechanical dyssynchrony, thereby improving cardiac function, symptoms, and prognosis. Numerous clinical trials have consistently highlighted the benefits of CRT in this subgroup, leading to its unanimous recommendation in clinical practice guidelines. However, a significant proportion of patients do not achieve an adequate therapeutic response, despite adherence to these guidelines. As CRT treats patients by correcting cardiac electromechanical dyssynchrony, assessing electrical and mechanical dyssynchrony is crucial in candidate selection. This review explores the evidence, recent clinical practice guidelines, and insight into electrical and mechanical dyssynchrony to optimize CRT candidate selection in HF patients with prolonged QRS duration.
A Novel Self‐Attention Transfer Adaptive Learning Approach for Brain Tumor Categorization
Authors: Shawly Tawfeeq , Alsheikhy Ahmed A.
Published: September 2024

Brain tumors cause death to a lot of people globally. Brain tumor disease is seen as one of the most lethal diseases since its mortality rate is high. Nevertheless, this rate can be diminished if the disease is identified and treated early. Recently, healthcare providers have relied on computed tomography (CT) scans and magnetic resonance imaging (MRI) in their diagnosis. Currently, various artificial intelligence (AI)‐based solutions have been implemented to diagnose this disease early to prepare suitable treatment plans. In this article, we propose a novel self‐attention transfer adaptive learning approach (SATALA) to identify brain tumors. This approach is an automated AI‐based model that contains two deep‐learning technologies to determine the existence of brain tumors. In addition, the proposed approach categorizes the identified tumors into two groups, which are benign and malignant. The developed method incorporates two deep‐learning technologies: a convolutional neural network (CNN), which is VGG‐19, and a new UNET network architecture. This approach is trained and evaluated on six public datasets and attained exquisite results. It achieved an average of 95% accuracy and anF1‐score of 96.61%. The proposed approach was compared with other state‐of‐the‐art models that were reported in the related work. The conducted experiments show that the proposed approach generates exquisite outputs and exceeds other works in some scenarios. In conclusion, we can infer that the proposed approach provides trustworthy identifications of brain cancer and can be applied in healthcare facilities.
Schwannoma at an Unusual Site: Case Report and Surgical Technique Discussion for Nasal Dorsum
Authors: Kadasah Sultan K. , Alshammari Abdulrazaq M. , Alharbi Nader S. , Alshehri Ibtihal S. , Alasiri Raghad Y. , Aldhabaan Saud A. , Alsayed Ghalib X. , Almalki Adnan Q.
Published: September 2024

Peripheral nerve sheath tumors (PNSTs), while uncommon, can have a significant impact on appearance and quality of life, especially when they form in prominent areas such as the nose dorsum. We discuss a case of a 29‐year‐old woman who developed a benign PNST on the right side of her nasal ala. This tumor gradually grew, impairing her face appearance. Diagnostic tests, such as computed tomography (CT) and magnetic resonance imaging (MRI), revealed the tumor as a slowly growing, well‐defined mass. The tumor was removed via open rhinoplasty under general anesthesia, and pathological investigation verified its benign nature. After surgery, the patient’s quality of life improved significantly, and there were no evidence of tumor recurrence after eight months. This case emphasizes the need of including PNST in the differential diagnosis of nasal tumors.
Supplementary Table S1 from Arginine Methylation of DDX3 by PRMT1 Mediates Mitochondrial Homeostasis to Promote Breast Cancer Metastasis
Authors: Hsu Wen-Jing , Chiang Ming-Chen , Chao Yi-Chun , Chang Yu-Chu , Hsu Ming-Chien , Chung Chu-Hung , Tsai I-Lin , Chu Cheng-Ying , Wu Han-Chung , Yang Ching-Chieh , Lee Chi-Ching , Lin Cheng-Wei
Published: September 2024

Resource and reagent used in this study.
Supplementary Data from Integrative Multiomics Analyses Identify Molecular Subtypes of Head and Neck Squamous Cell Carcinoma with Distinct Therapeutic Vulnerabilities
Authors: Diao Pengfei , Dai Yibin , Wang An , Bu Xiaoxuan , Wang Ziyu , Li Jin , Wu Yaping , Jiang Hongbing , Wang Yanling , Cheng Jie
Published: September 2024

Supplementary Figures and legends
Supplementary Figure S7 from Arginine Methylation of DDX3 by PRMT1 Mediates Mitochondrial Homeostasis to Promote Breast Cancer Metastasis
Authors: Hsu Wen-Jing , Chiang Ming-Chen , Chao Yi-Chun , Chang Yu-Chu , Hsu Ming-Chien , Chung Chu-Hung , Tsai I-Lin , Chu Cheng-Ying , Wu Han-Chung , Yang Ching-Chieh , Lee Chi-Ching , Lin Cheng-Wei
Published: September 2024

DDX3 regulates mitophagy in breast cancer.
Supplementary Methods and Materials from VPAC2 Receptor Signaling Promotes Growth and Immunosuppression in Pancreatic Cancer
Authors: Passang Tenzin , Wang Shuhua , Zhang Hanwen , Zeng Fanyuan , Hsu Po-Chih , Wang Wenxi , Li Jian-Ming , Liu Yuan , Ravindranathan Sruthi , Lesinski Gregory B. , Waller Edmund K.
Published: September 2024

Supplementary Methods and Materials
Figure S6 from VPAC2 Receptor Signaling Promotes Growth and Immunosuppression in Pancreatic Cancer
Authors: Passang Tenzin , Wang Shuhua , Zhang Hanwen , Zeng Fanyuan , Hsu Po-Chih , Wang Wenxi , Li Jian-Ming , Liu Yuan , Ravindranathan Sruthi , Lesinski Gregory B. , Waller Edmund K.
Published: September 2024

Supplementary Figure
Figure S5 from VPAC2 Receptor Signaling Promotes Growth and Immunosuppression in Pancreatic Cancer
Authors: Passang Tenzin , Wang Shuhua , Zhang Hanwen , Zeng Fanyuan , Hsu Po-Chih , Wang Wenxi , Li Jian-Ming , Liu Yuan , Ravindranathan Sruthi , Lesinski Gregory B. , Waller Edmund K.
Published: September 2024

Supplementary Figure
Figure S3 from VPAC2 Receptor Signaling Promotes Growth and Immunosuppression in Pancreatic Cancer
Authors: Passang Tenzin , Wang Shuhua , Zhang Hanwen , Zeng Fanyuan , Hsu Po-Chih , Wang Wenxi , Li Jian-Ming , Liu Yuan , Ravindranathan Sruthi , Lesinski Gregory B. , Waller Edmund K.
Published: September 2024

Supplementary Figure
Figure S2 from VPAC2 Receptor Signaling Promotes Growth and Immunosuppression in Pancreatic Cancer
Authors: Passang Tenzin , Wang Shuhua , Zhang Hanwen , Zeng Fanyuan , Hsu Po-Chih , Wang Wenxi , Li Jian-Ming , Liu Yuan , Ravindranathan Sruthi , Lesinski Gregory B. , Waller Edmund K.
Published: September 2024

Supplementary Figure
Figure S2 from Scribble Deficiency Promotes Pancreatic Ductal Adenocarcinoma Development and Metastasis
Authors: Bermejo-Rodriguez Camino , Araos Henríquez Joaquín , Caligiuri Giuseppina , Pinto Teles Sara , Park Youngkyu , Evans Anthony , Barrera Lawrence N. , Neesse Albrecht , Grützmann Robert , Aust Daniela , Rümmele Petra , Knösel Thomas , Narita Masako , Narita Masashi , Campbell Fiona , Öhlund Daniel , Pilarsky Christian , Dow Lukas E. , Humbert Patrick O. , Biffi Giulia , Tuveson David A. , Perez-Mancera Pedro A.
Published: September 2024

Supplementary Figure 2
Figure S12 from Scribble Deficiency Promotes Pancreatic Ductal Adenocarcinoma Development and Metastasis
Authors: Bermejo-Rodriguez Camino , Araos Henríquez Joaquín , Caligiuri Giuseppina , Pinto Teles Sara , Park Youngkyu , Evans Anthony , Barrera Lawrence N. , Neesse Albrecht , Grützmann Robert , Aust Daniela , Rümmele Petra , Knösel Thomas , Narita Masako , Narita Masashi , Campbell Fiona , Öhlund Daniel , Pilarsky Christian , Dow Lukas E. , Humbert Patrick O. , Biffi Giulia , Tuveson David A. , Perez-Mancera Pedro A.
Published: September 2024

Supplementary Figure 12
Figure S10 from Scribble Deficiency Promotes Pancreatic Ductal Adenocarcinoma Development and Metastasis
Authors: Bermejo-Rodriguez Camino , Araos Henríquez Joaquín , Caligiuri Giuseppina , Pinto Teles Sara , Park Youngkyu , Evans Anthony , Barrera Lawrence N. , Neesse Albrecht , Grützmann Robert , Aust Daniela , Rümmele Petra , Knösel Thomas , Narita Masako , Narita Masashi , Campbell Fiona , Öhlund Daniel , Pilarsky Christian , Dow Lukas E. , Humbert Patrick O. , Biffi Giulia , Tuveson David A. , Perez-Mancera Pedro A.
Published: September 2024

Supplementary Figure 10
Supplementary Tables from An Atlas of Accessible Chromatin in Advanced Prostate Cancer Reveals the Epigenetic Evolution during Tumor Progression
Authors: Shrestha Raunak , Chesner Lisa N. , Zhang Meng , Zhou Stanley , Foye Adam , Lundberg Arian , Weinstein Alana S. , Sjöström Martin , Zhu Xiaolin , Moreno-Rodriguez Thaidy , Li Haolong , Alumkal Joshi J. , Aggarwal Rahul , Small Eric J. , Lupien Mathieu , Quigley David A. , Feng Felix Y.
Published: September 2024

Supplementary Tables
Supplementary Materials and Methods from Physical Activity Decreases Inflammation and Delays the Development of Obesity-Associated Pancreatic Ductal Adenocarcinoma
Authors: Pita-Grisanti Valentina , Velez-Bonet Ericka , Chasser Kaylin , Hurst Zachary , Liette Alexus , Vulic Grace , Dubay Kelly , Lahooti Ali , Badi Niharika , Ueltschi Olivia , Gumpper-Fedus Kristyn , Hsueh Hsiang-Yin , Lahooti Ila , Chavez-Tomar Myrriah , Terhorst Samantha , Knoblaugh Sue E. , Cao Lei , Huang Wei , Coss Christopher C. , Mace Thomas A. , Choueiry Fouad , Hinton Alice , Culp Stacey , Mitchell Jennifer M. , Schmandt Rosemarie , Onstad Grinsfelder Michaela , Basen-Engquist Karen , Cruz-Monserrate Zobeida
Published: September 2024

Supplementary Materials and Methods - Clean
Supplementary Appendix from An Atlas of Accessible Chromatin in Advanced Prostate Cancer Reveals the Epigenetic Evolution during Tumor Progression
Authors: Shrestha Raunak , Chesner Lisa N. , Zhang Meng , Zhou Stanley , Foye Adam , Lundberg Arian , Weinstein Alana S. , Sjöström Martin , Zhu Xiaolin , Moreno-Rodriguez Thaidy , Li Haolong , Alumkal Joshi J. , Aggarwal Rahul , Small Eric J. , Lupien Mathieu , Quigley David A. , Feng Felix Y.
Published: September 2024

A list of individuals in the SU2C/PCF West Coast Prostate Cancer Dream Team
Supplementary Data from Mutated HRAS activates YAP1-AXL signaling to drive metastasis of head and neck cancer
Authors: Jagadeeshan Sankar , Prasad Manu , Badarni Mai , Ben Lulu Talal , Liju Vijayasteltar Belsamma. , Mathukkada Sooraj , Saunders Claire , Shnerb Avital Beeri. , Zorea Jonathan , Yegodayev Ksenia M. , Wainer Monica , Vtorov Liza , Allon Irit , Cohen Ofir , Gausdal Gro , Friedmann-Morvinski Dinorah , Cheong Sok Ching , Ho Alan L. , Rosenberg Ari J. , Kessler Linda , Burrows Francis , Kong Dexin , Grandis Jennifer R. , Gutkind J Silvio , Elkabets Moshe
Published: September 2024

Supplementary Materials and Methods
Supplementary File 3 from Bayesian machine learning enables identification of transcriptional network disruptions associated with drug-resistant prostate cancer
Authors: Blatti Charles , de la Fuente Jesús , Gao Huanyao , Marín-Goñi Irene , Chen Zikun , Zhao Sihai D. , Tan Winston , Weinshilboum Richard , Kalari Krishna R. , Wang Liewei , Hernaez Mikel
Published: September 2024

Supplementary File 3: Excel file with Supplementary tables S6 - S9
Supplementary File 2 from Bayesian machine learning enables identification of transcriptional network disruptions associated with drug-resistant prostate cancer
Authors: Blatti Charles , de la Fuente Jesús , Gao Huanyao , Marín-Goñi Irene , Chen Zikun , Zhao Sihai D. , Tan Winston , Weinshilboum Richard , Kalari Krishna R. , Wang Liewei , Hernaez Mikel
Published: September 2024

Supplementary File 2: Excel file with CommunityAMARETTO Enrichment results
Supplementary Table 2 from Spatial transcriptomics depict ligand-receptor crosstalk heterogeneity at the tumor-stroma interface in long-term ovarian cancer survivors
Authors: Ferri-Borgogno Sammy , Zhu Ying , Sheng Jianting , Burks Jared K. , Gomez Javier A. , Wong Kwong Kwok , Wong Stephen T. C. , Mok Samuel C.
Published: September 2024

Spatial Transcriptomics differentially expressed genes
Supplementary Table 1 from Neutrophil conversion to a tumor-killing phenotype underpins effective microbial therapy
Authors: Yam Andrew O. , Bailey Jacqueline , Lin Francis , Jakovija Arnolda , Youlten Scott E. , Counoupas Claudio , Gunzer Matthias , Bald Tobias , Woodruff Trent M. , Triccas James A. , Goldstein Leonard D. , Gallego-Ortega David , Grey Shane T. , Chtanova Tatyana
Published: September 2024

Characterization of neutrophil populations in single cell analysis.
Suppl video 4 from Neutrophil conversion to a tumor-killing phenotype underpins effective microbial therapy
Authors: Yam Andrew O. , Bailey Jacqueline , Lin Francis , Jakovija Arnolda , Youlten Scott E. , Counoupas Claudio , Gunzer Matthias , Bald Tobias , Woodruff Trent M. , Triccas James A. , Goldstein Leonard D. , Gallego-Ortega David , Grey Shane T. , Chtanova Tatyana
Published: September 2024

Neutrophil interactions with LLC cells lead to tumor cell blebbing.
Suppl video 2 from Neutrophil conversion to a tumor-killing phenotype underpins effective microbial therapy
Authors: Yam Andrew O. , Bailey Jacqueline , Lin Francis , Jakovija Arnolda , Youlten Scott E. , Counoupas Claudio , Gunzer Matthias , Bald Tobias , Woodruff Trent M. , Triccas James A. , Goldstein Leonard D. , Gallego-Ortega David , Grey Shane T. , Chtanova Tatyana
Published: September 2024

Neutrophil interactions with LLC cells in unmanipulated and treated tumors.
Table S2 from Dysregulation of mitochondrial translation caused by CBFB deficiency cooperates with mutant PIK3CA and is a vulnerability in breast cancer
Authors: Malik Navdeep , Kim Young-Im , Yan Hualong , Tseng Yu-Chou , du Bois Wendy , Ayaz Gamze , Tran Andy D. , Vera Ramírez Laura , Yang Howard H. , Michalowski Aleksandra M. , Kruhlak Michael , Lee Maxwell , Hunter Kent W. , Huang Jing
Published: September 2024

This is supplementary Table 2.
Table S1 from Dysregulation of mitochondrial translation caused by CBFB deficiency cooperates with mutant PIK3CA and is a vulnerability in breast cancer
Authors: Malik Navdeep , Kim Young-Im , Yan Hualong , Tseng Yu-Chou , du Bois Wendy , Ayaz Gamze , Tran Andy D. , Vera Ramírez Laura , Yang Howard H. , Michalowski Aleksandra M. , Kruhlak Michael , Lee Maxwell , Hunter Kent W. , Huang Jing
Published: September 2024

This is supplementary Table 1.
Supplementary Data from Polyunsaturated fatty acid-bound alpha-fetoprotein promotes immune suppression by altering human dendritic cell metabolism
Authors: Munson Paul V. , Adamik Juraj , Hartmann Felix J. , Favaro Patricia M. B. , Ho Daniel , Bendall Sean C. , Combes Alexis J. , Krummel Matthew F. , Zhang Karen , Kelley Robin K. , Butterfield Lisa H.
Published: September 2024

Supplementary Figures, Table, Supplementary Tables
TableS5 from Enhancer co-amplification and hijacking promote oncogene expression in liposarcoma
Authors: Liu Tingting , Wang Juan , Yang Hongbo , Jin Qiushi , Wang Xiaotao , Fu Yihao , Luan Yu , Wang Qixuan , Youngblood Mark W. , Lu Xinyan , Casadei Lucia , Pollock Raphael , Yue Feng
Published: September 2024

Sequence Data Information in Lipo863B
TableS4 from Enhancer co-amplification and hijacking promote oncogene expression in liposarcoma
Authors: Liu Tingting , Wang Juan , Yang Hongbo , Jin Qiushi , Wang Xiaotao , Fu Yihao , Luan Yu , Wang Qixuan , Youngblood Mark W. , Lu Xinyan , Casadei Lucia , Pollock Raphael , Yue Feng
Published: September 2024

Patient Sample WGS data statistics
Supplementary Figures from Enhancer co-amplification and hijacking promote oncogene expression in liposarcoma
Authors: Liu Tingting , Wang Juan , Yang Hongbo , Jin Qiushi , Wang Xiaotao , Fu Yihao , Luan Yu , Wang Qixuan , Youngblood Mark W. , Lu Xinyan , Casadei Lucia , Pollock Raphael , Yue Feng
Published: September 2024

All Supplementary Figures
Supplementary Table S5 from RBM10 loss promotes EGFR-driven lung cancer and confers sensitivity to spliceosome inhibition
Authors: Bao Yufang , Zhang Sirui , Zhang Xiaoyu , Pan Yunjian , Yan Yueren , Wang Ning , Ren Yunpeng , Zuo Ji , Zong Wei-Xing , Wang Zefeng , Wang Yongbo
Published: September 2024

Supplementary Table S5
Supplementary Table S1 from RBM10 loss promotes EGFR-driven lung cancer and confers sensitivity to spliceosome inhibition
Authors: Bao Yufang , Zhang Sirui , Zhang Xiaoyu , Pan Yunjian , Yan Yueren , Wang Ning , Ren Yunpeng , Zuo Ji , Zong Wei-Xing , Wang Zefeng , Wang Yongbo
Published: September 2024

Supplementary Table S1
Figure S7 from Comprehensive Metabolic Tracing Reveals the Origin and Catabolism of Cysteine in Mammalian Tissues and Tumors
Authors: Yoon Sang Jun , Combs Joseph A. , Falzone Aimee , Prieto-Farigua Nicolas , Caldwell Samantha , Ackerman Hayley D. , Flores Elsa R. , DeNicola Gina M.
Published: September 2024

Figure S7 contains mRNA expression of cysteine metabolic enzymes in patient liver, pancreas and lung tumors
Figure S6 from Comprehensive Metabolic Tracing Reveals the Origin and Catabolism of Cysteine in Mammalian Tissues and Tumors
Authors: Yoon Sang Jun , Combs Joseph A. , Falzone Aimee , Prieto-Farigua Nicolas , Caldwell Samantha , Ackerman Hayley D. , Flores Elsa R. , DeNicola Gina M.
Published: September 2024

Figure S6 contains total metabolite levels in lung cancer models related to Figure 5
Figure S4 from Comprehensive Metabolic Tracing Reveals the Origin and Catabolism of Cysteine in Mammalian Tissues and Tumors
Authors: Yoon Sang Jun , Combs Joseph A. , Falzone Aimee , Prieto-Farigua Nicolas , Caldwell Samantha , Ackerman Hayley D. , Flores Elsa R. , DeNicola Gina M.
Published: September 2024

Figure S4 contains the total metabolite levels in healthy mouse tissues related to Figure 3
Figure S2 from Comprehensive Metabolic Tracing Reveals the Origin and Catabolism of Cysteine in Mammalian Tissues and Tumors
Authors: Yoon Sang Jun , Combs Joseph A. , Falzone Aimee , Prieto-Farigua Nicolas , Caldwell Samantha , Ackerman Hayley D. , Flores Elsa R. , DeNicola Gina M.
Published: September 2024

Figure S2 demonstrates that transsulfuration intermediates are limiting for activity in NSCLC cells
Figure S1 from Comprehensive Metabolic Tracing Reveals the Origin and Catabolism of Cysteine in Mammalian Tissues and Tumors
Authors: Yoon Sang Jun , Combs Joseph A. , Falzone Aimee , Prieto-Farigua Nicolas , Caldwell Samantha , Ackerman Hayley D. , Flores Elsa R. , DeNicola Gina M.
Published: September 2024

Figure S1 reports the status of common mutations in the cell lines used in this study.
Supplementary Table S2 from Nucleophosmin plays a role in repairing DNA damage and is a target for cancer treatment
Authors: Sekhar Konjeti R. , Freeman Michael L.
Published: September 2024

The relationship between NPM1 dependency and cell line metastatic propensity, determined from genome-wide CRISPR-Cas9 screens (https://depmap.org/portal/interactive). A score of zero indicates that a gene is not essential. Common essential genes have a median score of -1. A lower score indicates that a gene is more likely to be dependent in a given cell line.
Supplementary Table S1 from Nucleophosmin plays a role in repairing DNA damage and is a target for cancer treatment
Authors: Sekhar Konjeti R. , Freeman Michael L.
Published: September 2024

The relationship between cancer cell line viability and NPM1 dependency, determined from genome-wide CRISPR-Cas9 screens (https://depmap.org/portal/interactive). A score of zero indicates that a gene is not essential. Common essential genes have a median score of -1. A lower score indicates that a gene is more likely to be dependent in a given cell line.
Table S3 from ASS1-mediated reductive carboxylation of cytosolic glutamine confers ferroptosis resistance in cancer cells
Authors: Hu Qiangsheng , Dai Jie , Zhang Zheng , yu Huansha , Zhang Jing , Zhu Xinsheng , Qin Yi , Zhang Lele , Zhang Peng
Published: September 2024

Supplementary RNA sequencing raw data
Supplementary Table 9 from ANO1 reprograms cholesterol metabolism and the tumor microenvironment to promote cancer metastasis
Authors: Deng Chun-Miao , Zhang Guo-Geng , Liu Qin-Wen , Xu Jiao-Jiao , Liu Zhi-Chao , Yang Jing , Xu Tao-Yang , Li Zhi-Gang , Zhang Fan , Li Bin
Published: September 2024

Supplementary Table 9 shows Top 30 cytokines upregulated in the CM from fibroblasts cultured with CM-ANO1 compared with CM-CON
Supplementary Data from Genome-wide splicing QTL analysis identifies causal risk variants for non-small cell lung cancer
Authors: Jin Meng , Liu Bo , Chen Can , Huang Yongbiao , Zhang Huixian , Chen Bingliang , Song Guoda , Zhao Dong , Duan Limin , Liu Wei , Yang Haizhen , Yue Fang , Liu Peijun , Yuan Xianglin , Chu Qian , Tian Jianbo , Hu Ke
Published: September 2024

Supplementary Data
Table S4 from MEN1 degradation induced by neddylation and the CUL4B-DCAF7 axis promotes pancreatic neuroendocrine tumor progression
Authors: Xu Junfeng , Ye Zeng , Zhuo Qifeng , Gao Heli , Qin Yi , Llou Xin , Zhang Wuhu , Wang Fei , Wang Yan , Jing Desheng , Fan Guixiong , Zhang Yue , Chen Xuemin , Chen Jie , Xu Xiaowu , Yu Xianjun , Ji Shunrong
Published: September 2024

No difference in DCAF7 expression levels in MEN1 wildtype vs mutant samples
Table S3 from MEN1 degradation induced by neddylation and the CUL4B-DCAF7 axis promotes pancreatic neuroendocrine tumor progression
Authors: Xu Junfeng , Ye Zeng , Zhuo Qifeng , Gao Heli , Qin Yi , Llou Xin , Zhang Wuhu , Wang Fei , Wang Yan , Jing Desheng , Fan Guixiong , Zhang Yue , Chen Xuemin , Chen Jie , Xu Xiaowu , Yu Xianjun , Ji Shunrong
Published: September 2024

Gene mutation analysis identified in 50 patients with PanNETs
Figure S2 from MEN1 degradation induced by neddylation and the CUL4B-DCAF7 axis promotes pancreatic neuroendocrine tumor progression
Authors: Xu Junfeng , Ye Zeng , Zhuo Qifeng , Gao Heli , Qin Yi , Llou Xin , Zhang Wuhu , Wang Fei , Wang Yan , Jing Desheng , Fan Guixiong , Zhang Yue , Chen Xuemin , Chen Jie , Xu Xiaowu , Yu Xianjun , Ji Shunrong
Published: September 2024

Representative tandem MS spectrum of the QATGIEDGELR peptide from CUL4B as determined by IP-Mass Spec
Supplementary Table 7 from Comprehensive DNA methylation analysis indicates that pancreatic intraepithelial neoplasia lesions are acinar-derived and epigenetically primed for carcinogenesis
Authors: Lo Emily K. W. , Mears Brian M. , Maurer H. Carlo , Idrizi Adrian , Hansen Kasper D. , Thompson Elizabeth D. , Hruban Ralph H. , Olive Kenneth P. , Feinberg Andrew P.
Published: September 2024

Progression DMRs
Supplementary Table 4 from Comprehensive DNA methylation analysis indicates that pancreatic intraepithelial neoplasia lesions are acinar-derived and epigenetically primed for carcinogenesis
Authors: Lo Emily K. W. , Mears Brian M. , Maurer H. Carlo , Idrizi Adrian , Hansen Kasper D. , Thompson Elizabeth D. , Hruban Ralph H. , Olive Kenneth P. , Feinberg Andrew P.
Published: September 2024

Pairwise mean-based differentially methylated regions
Table S8 from An in vivo CRISPR screen identifies that SNRPC promotes triple-negative breast cancer progression
Authors: Lu Xun-Xi , Yang Wen-Xiao , Pei Yu-Chen , Luo Hong , Li Xiaoguang , Wang Yun-Jin , Zhang Guo-Liang , Ling Hong , Shao Zhiming , Hu Xin
Published: September 2024

Table S8. Genes with changed Pol II peaks in SNRPC-KD CA1a cells.
Supplementary Data from Caffeine supplementation and FOXM1 inhibition enhance the antitumor effect of statins in neuroblastoma
Authors: Tran Gia-Buu , Ding Jane , Ye Bingwei , Liu Mengling , Yu Yajie , Zha Yunhong , Dong Zheng , Liu Kebin , Sudarshan Sunil , Ding Han-Fei
Published: September 2024

Supplementary Figures S1-S7
Figure S3 from Distinct Nrf2 Signaling Thresholds Mediate Lung Tumor Initiation and Progression
Authors: DeBlasi Janine M. , Falzone Aimee , Caldwell Samantha , Prieto-Farigua Nicolas , Prigge Justin R. , Schmidt Edward E. , Chio Iok In Christine , Karreth Florian A. , DeNicola Gina M.
Published: September 2024

Supplementary Fig. S3 shows analysis of lung tumor burden and tumor cell proliferation/ death in the Kras; p53 model with Keap1/ Nrf2 mutation.
Supplementary Table from Ubiquitin ligases Siah1a/2 control alveolar macrophage functions to limit carcinogen-induced lung adenocarcinoma
Authors: Scortegagna Marzia , Du Yuanning , Bradley Linda M. , Wang Kun , Molinolo Alfredo , Ruppin Eytan , Murad Rabi , Ronai Ze'ev A.
Published: September 2024

Sup Table 1
Supplementary Fig 6 from Ubiquitin ligases Siah1a/2 control alveolar macrophage functions to limit carcinogen-induced lung adenocarcinoma
Authors: Scortegagna Marzia , Du Yuanning , Bradley Linda M. , Wang Kun , Molinolo Alfredo , Ruppin Eytan , Murad Rabi , Ronai Ze'ev A.
Published: September 2024

Sup Fig 6
Supplementary Material from Prospective analysis reveals associations between carbohydrate intakes, genetic predictors of short-chain fatty acid synthesis, and colorectal cancer risk
Authors: Watling Cody Z. , Kelly Rebecca K. , Murphy Neil , Gunter Marc , Piernas Carmen , Bradbury Kathryn E. , Schmidt Julie A. , Key Timothy J. , Perez-Cornago Aurora
Published: September 2024

Supplementary Material
Table S1 from Proteomic profiling of extracellular matrix components from patient metastases identifies consistently elevated proteins for developing nanobodies that target primary tumors and metastases
Authors: Jailkhani Noor , Clauser Karl R. , Mak Howard H. , Rickelt Steffen , Tian Chenxi , Whittaker Charles A. , Tanabe Kenneth K. , Purdy Stephen R. , Carr Steven A. , Hynes Richard O.
Published: September 2024

Supplementary Table S1
Supplementary Information from β-catenin-driven differentiation is a tissue-specific epigenetic vulnerability in adrenal cancer
Authors: Mohan Dipika R. , Borges Kleiton S. , Finco Isabella , LaPensee Christopher R. , Rege Juilee , Solon April L. , Little Donald W. , Else Tobias , Almeida Madson Q. , Dang Derek , Haggerty-Skeans James , Apfelbaum April A. , Vinco Michelle , Wakamatsu Alda , Mariani Beatriz M. P. , Amorim Larissa Costa. , Latronico Ana Claudia. , Mendonca Berenice B. , Zerbini Maria Claudia N. , Lawlor Elizabeth R. , Ohi Ryoma , Auchus Richard J. , Rainey William E. , Marie Suely K.N. , Giordano Thomas J. , Venneti Sriram , Fragoso Maria Candida Barisson Villares , Breault David T. , Lerario Antonio Marcondes. , Hammer Gary D.
Published: September 2024

Supplementary Information:
Supplementary Figures 1-6 with Figure Legends, Supplementary Table 1 (reference only), Supplementary Table 2, Supplementary Methods, Supplementary References
Supplementary Data from β-catenin-driven differentiation is a tissue-specific epigenetic vulnerability in adrenal cancer
Authors: Mohan Dipika R. , Borges Kleiton S. , Finco Isabella , LaPensee Christopher R. , Rege Juilee , Solon April L. , Little Donald W. , Else Tobias , Almeida Madson Q. , Dang Derek , Haggerty-Skeans James , Apfelbaum April A. , Vinco Michelle , Wakamatsu Alda , Mariani Beatriz M. P. , Amorim Larissa Costa. , Latronico Ana Claudia. , Mendonca Berenice B. , Zerbini Maria Claudia N. , Lawlor Elizabeth R. , Ohi Ryoma , Auchus Richard J. , Rainey William E. , Marie Suely K.N. , Giordano Thomas J. , Venneti Sriram , Fragoso Maria Candida Barisson Villares , Breault David T. , Lerario Antonio Marcondes. , Hammer Gary D.
Published: September 2024

Supplementary Table 1: NCI-H295R RNA-seq FPKM table, Related to Figures 2-4, 6.
Supplementary Table 4 from CellMinerCDB: NCATS is a Web-Based Portal Integrating Public Cancer Cell Line Databases for Pharmacogenomic Explorations
Authors: Reinhold William C. , Wilson Kelli , Elloumi Fathi , Bradwell Katie R. , Ceribelli Michele , Varma Sudhir , Wang Yanghsin , Duveau Damien , Menon Nikhil , Trepel Jane , Zhang Xiaohu , Klumpp-Thomas Carleen , Michael Samuel , Shinn Paul , Luna Augustin , Thomas Craig , Pommier Yves
Published: September 2024

Molecular targets
Supplementary Data from The mTOR Signaling Pathway Interacts with the ER Stress Response and the Unfolded Protein Response in Cancer
Authors: Mafi Sahar , Ahmadi Elham , Meehan Eileen , Chiari Conner , Mansoori Behzad , Sadeghi Hossein , Milani Sahar , Jafarinia Morteza , Taeb Shahram , Mafakheri Bashmagh Bayan , Mansoorian Seyed Mohammad Ali. , Soltani-Zangbar Mohammad Sadegh , Wang Kepeng , Rostamzadeh Davoud
Published: September 2024

Supplementary Fig. S2
Supplementary Data from The mTOR Signaling Pathway Interacts with the ER Stress Response and the Unfolded Protein Response in Cancer
Authors: Mafi Sahar , Ahmadi Elham , Meehan Eileen , Chiari Conner , Mansoori Behzad , Sadeghi Hossein , Milani Sahar , Jafarinia Morteza , Taeb Shahram , Mafakheri Bashmagh Bayan , Mansoorian Seyed Mohammad Ali. , Soltani-Zangbar Mohammad Sadegh , Wang Kepeng , Rostamzadeh Davoud
Published: September 2024

Supplementary Fig. S1
Supplementary Figure legends from Metformin reprograms tryptophan metabolism to stimulate CD8+ T cell function in colorectal cancer
Authors: Huang Xiaowen , Sun Tiantian , Wang Jilin , Hong Xialu , Chen Huimin , Yan Tingting , Zhou Chengbei , Sun Danfeng , Yang Chen , Yu TaChung , Su Wenyu , Du Wan , Xiong Hua
Published: September 2024

This file contains the legends of supplementary figures.
Supplementary Table 2 from Unique transcriptional profiles underlie osteosarcomagenesis driven by different p53 mutants
Authors: Chachad Dhruv , Patel Lalit R. , Recio Carlos Vera. , Pourebrahim Rasoul , Whitley Elizabeth M. , Wang Wenyi , Su Xiaoping , Xu An , Lee Dung-Fang , Lozano Guillermina
Published: September 2024

List of mice belonging to different cohorts
Supplementary Table 1 from Unique transcriptional profiles underlie osteosarcomagenesis driven by different p53 mutants
Authors: Chachad Dhruv , Patel Lalit R. , Recio Carlos Vera. , Pourebrahim Rasoul , Whitley Elizabeth M. , Wang Wenyi , Su Xiaoping , Xu An , Lee Dung-Fang , Lozano Guillermina
Published: September 2024

List of primers used in genotyping and qRT-PCR experiments
Supplementary File 6 from Proteasome Inhibition Sensitizes Liposarcoma to MDM2 Inhibition with Nutlin-3 by Activating the ATF4/CHOP Stress Response Pathway
Authors: Ludwig Michael P. , Galbraith Matthew D. , Eduthan Neetha Paul. , Hill Amanda A. , Clay Michael R. , Moreno Tellez Cristiam , Wilky Breelyn A. , Elias Anthony , Espinosa Joaquín Maximiliano. , Sullivan Kelly D.
Published: September 2024

Nutlin-3-carfilzomib-treated LPS transcriptome analyses.
Supplementary File 3 from Proteasome Inhibition Sensitizes Liposarcoma to MDM2 Inhibition with Nutlin-3 by Activating the ATF4/CHOP Stress Response Pathway
Authors: Ludwig Michael P. , Galbraith Matthew D. , Eduthan Neetha Paul. , Hill Amanda A. , Clay Michael R. , Moreno Tellez Cristiam , Wilky Breelyn A. , Elias Anthony , Espinosa Joaquín Maximiliano. , Sullivan Kelly D.
Published: September 2024

GSEA of nutlin-3-treated LPS transcriptome data.
Movie S3 from Inter- and intra-metastatic heterogeneity shapes adaptive therapy cycling dynamics
Authors: Gallaher Jill , Strobl Maximilian , West Jeffrey , Gatenby Robert , Zhang Jingsong , Robertson-Tessi Mark , Anderson Alexander R.A.
Published: September 2024

Movies corresponding to simulation examples in Figure 5, comparing sequential seeding of homogeneous metastases with simultaneous seeding of heterogeneous metastases over simulations with different total burden and number of metastases.
Movie S1 from Inter- and intra-metastatic heterogeneity shapes adaptive therapy cycling dynamics
Authors: Gallaher Jill , Strobl Maximilian , West Jeffrey , Gatenby Robert , Zhang Jingsong , Robertson-Tessi Mark , Anderson Alexander R.A.
Published: September 2024

Movies corresponding to simulation examples in Figure 3, comparing metastases simulations with different total burden and number of metastases.
Supplementary Materials, Figure S1-S4, Table S1-S9 from Functional and clinical characterization of variants of uncertain significance identifies a hotspot for inactivating missense variants in RAD51C
Authors: Hu Chunling , Belur Nagaraj Anil , Shimelis Hermela , Montalban Gemma , Lee Kun Y. , Huang Huaizhi , Lumby Carolyn A. , Na Jie , Susswein Lisa R. , Roberts Maegan E. , Marshall Megan L. , Hiraki Susan , LaDuca Holly , Chao Elizabeth , Yussuf Amal , Pesaran Tina , Neuhausen Susan L. , Haiman Christopher A. , Kraft Peter , Lindström Sara , Palmer Julie R. , Teras Lauren R. , Vachon Celine M. , Yao Song , Ong Irene , Nathanson Katherine L. , Weitzel Jeffrey N. , Boddicker Nicholas , Gnanaolivu Rohan , Polley Eric C. , Mer Georges , Cui Gaofeng , Karam Rachid , Richardson Marcy E. , Domchek Susan M. , Yadav Siddhartha , Hruska Kathleen S. , Dolinsky Jill , Weroha S. John , Hart Steven N. , Simard Jacques , Masson Jean-Yves , Pang Yuan-Ping , Couch Fergus J.
Published: September 2024

Supplementary Materials, References, Tables and Figures
Supplementary Table S8 from The EstroGene database reveals diverse temporal, context-dependent, and bidirectional estrogen receptor regulomes in breast cancer
Authors: Li Zheqi , Li Tianqin , Yates Megan E. , Wu Yang , Ferber Amanda , Chen Lyuqin , Brown Daniel D. , Carroll Jason S. , Sikora Matthew J. , Tseng George C. , Oesterreich Steffi , Lee Adrian V.
Published: September 2024

High confident E2-regulated genes and BETA score
Supplementary Table S6 from The EstroGene database reveals diverse temporal, context-dependent, and bidirectional estrogen receptor regulomes in breast cancer
Authors: Li Zheqi , Li Tianqin , Yates Megan E. , Wu Yang , Ferber Amanda , Chen Lyuqin , Brown Daniel D. , Carroll Jason S. , Sikora Matthew J. , Tseng George C. , Oesterreich Steffi , Lee Adrian V.
Published: September 2024

E2-induced DEGs from inter-dataset concordance analysis
Supplementary Table S5 from The EstroGene database reveals diverse temporal, context-dependent, and bidirectional estrogen receptor regulomes in breast cancer
Authors: Li Zheqi , Li Tianqin , Yates Megan E. , Wu Yang , Ferber Amanda , Chen Lyuqin , Brown Daniel D. , Carroll Jason S. , Sikora Matthew J. , Tseng George C. , Oesterreich Steffi , Lee Adrian V.
Published: September 2024

Overall data set and experiments included in the EstroGene database
Supplementary Table S10 from The EstroGene database reveals diverse temporal, context-dependent, and bidirectional estrogen receptor regulomes in breast cancer
Authors: Li Zheqi , Li Tianqin , Yates Megan E. , Wu Yang , Ferber Amanda , Chen Lyuqin , Brown Daniel D. , Carroll Jason S. , Sikora Matthew J. , Tseng George C. , Oesterreich Steffi , Lee Adrian V.
Published: September 2024

EstroGene temporal, contextual and directional signatures
Supplementary Table S1 from The EstroGene database reveals diverse temporal, context-dependent, and bidirectional estrogen receptor regulomes in breast cancer
Authors: Li Zheqi , Li Tianqin , Yates Megan E. , Wu Yang , Ferber Amanda , Chen Lyuqin , Brown Daniel D. , Carroll Jason S. , Sikora Matthew J. , Tseng George C. , Oesterreich Steffi , Lee Adrian V.
Published: September 2024

Inventory of EstroGene Database
Table S2 from Oxidative phosphorylation fueled by fatty acid oxidation sensitizes leukemic stem cells to cold
Authors: Griessinger Emmanuel , Pereira-Martins Diego , Nebout Marielle , Bosc Claudie , Saland Estelle , Boet Emeline , Sahal Ambrine , Chiche Johanna , Debayle Delphine , Fleuriot Lucile , Pruis Maurien , Mansat-De Mas Veronique , Vergez Francois , Récher Christian , Huls Gerwin , Sarry Jean-Emmanuel , Schuringa Jan Jacob , Peyron Jean-François
Published: September 2024

Proteomic_list_Pearson_Q1V-time
Supplementary Data from Alpha-1 adrenergic antagonists sensitize neuroblastoma to therapeutic differentiation
Authors: Broso Francesca , Gatto Pamela , Sidarovich Viktoryia , Ambrosini Chiara , De Sanctis Veronica , Bertorelli Roberto , Zaccheroni Elena , Ricci Benedetta , Destefanis Eliana , Longhi Sara , Sebastiani Enrico , Tebaldi Toma , Adami Valentina , Quattrone Alessandro
Published: September 2024

Supplementary Figures from S1 to S23 and Supplementary tables from S1 to S3