bluuebunny/crossref_metadata_2025 huggingface dataset:
Nanoparticles as Theranostic Vehicles in Experimental and Clinical Applications—Focus on Prostate and Breast Cancer
Authors: Elgqvist Jörgen
Published: May 2017

Prostate and breast cancer are the second most and most commonly diagnosed cancer in men and women worldwide, respectively. The American Cancer Society estimates that during 2016 in the USA around 430,000 individuals were diagnosed with one of these two types of cancers, and approximately 15% of them will die from the disease. In Europe, the rate of incidences and deaths are similar to those in the USA. Several different more or less successful diagnostic and therapeutic approaches have been developed and evaluated in order to tackle this issue and thereby decrease the death rates. By using nanoparticles as vehicles carrying both diagnostic and therapeutic molecular entities, individualized targeted theranostic nanomedicine has emerged as a promising option to increase the sensitivity and the specificity during diagnosis, as well as the likelihood of survival or prolonged survival after therapy. This article presents and discusses important and promising different kinds of nanoparticles, as well as imaging and therapy options, suitable for theranostic applications. The presentation of different nanoparticles and theranostic applications is quite general, but there is a special focus on prostate cancer. Some references and aspects regarding breast cancer are however also presented and discussed. Finally, the prostate cancer case is presented in more detail regarding diagnosis, staging, recurrence, metastases, and treatment options available today, followed by possible ways to move forward applying theranostics for both prostate and breast cancer based on promising experiments performed until today.
Ficus umbellata Vahl. (Moraceae) Stem Bark Extracts Exert Antitumor Activities In Vitro and In Vivo
Authors: Silihe Kevine , Zingue Stéphane , Winter Evelyn , Awounfack Charline , Bishayee Anupam , Desai Nishil , João Mello Leônidas , Michel Thomas , Tankeu Francine , Ndinteh Derek , Honorine Riwom Sara , Njamen Dieudonné , Creczynski-Pasa Tânia
Published: May 2017

A Ficus umbellata is used to treat cancer. The present work was therefore designed to assess antitumor potentials of F. umbellata extracts in nine different cell lines. Cell cycle, apoptosis, cell migration/invasion, levels of reactive oxygen species (ROS), mitochondrial membrane potential (MMP), caspases activities as well as Bcl-2 and Bcl-xL protein content were assessed in MDA-MB-231 cells. The 7,12-dimethylbenz(a)anthracene (DMBA)-induced carcinogenesis in rats were also used to investigate antitumor potential of F. umbellata extracts. The F. umbellata methanol extract exhibited a CC50 of 180 μg/mL in MDA-MB-231 cells after 24 h. It induced apoptosis in MCF-7 and MDA-MB-231 cells, while it did not alter their cell cycle phases. Further, it induced a decrease in MMP, an increase in ROS levels and caspases activities as well as a downregulation in Bcl-2 and Bcl-xL protein contents in MDA-MB-231 cells. In vivo, F. umbellata aqueous (200 mg/kg) and methanol (50 mg/kg) extracts significantly (p < 0.001) reduced ovarian tumor incidence (10%), total tumor burden (58% and 46%, respectively), average tumor weight (57.8% and 45.6%, respectively) as compared to DMBA control group. These results suggest antitumor potential of F. umbellata constituents possibly due to apoptosis induction mediated through ROS-dependent mitochondrial pathway.
Validation of Splicing Events in Transcriptome Sequencing Data
Authors: Kaisers Wolfgang , Ptok Johannes , Schwender Holger , Schaal Heiner
Published: May 2017

Genomic alignments of sequenced cellular messenger RNA contain gapped alignments which are interpreted as consequence of intron removal. The resulting gap-sites, genomic locations of alignment gaps, are landmarks representing potential splice-sites. As alignment algorithms report gap-sites with a considerable false discovery rate, validations are required. We describe two quality scores, gap quality score (gqs) and weighted gap information score (wgis), developed for validation of putative splicing events: While gqs solely relies on alignment data wgis additionally considers information from the genomic sequence. FASTQ files obtained from 54 human dermal fibroblast samples were aligned against the human genome (GRCh38) using TopHat and STAR aligner. Statistical properties of gap-sites validated by gqs and wgis were evaluated by their sequence similarity to known exon-intron borders. Within the 54 samples, TopHat identifies 1,000,380 and STAR reports 6,487,577 gap-sites. Due to the lack of strand information, however, the percentage of identified GT-AG gap-sites is rather low. While gap-sites from TopHat contain ≈89% GT-AG, gap-sites from STAR only contain ≈42% GT-AG dinucleotide pairs in merged data from 54 fibroblast samples. Validation with gqs yields 156,251 gap-sites from TopHat alignments and 166,294 from STAR alignments. Validation with wgis yields 770,327 gap-sites from TopHat alignments and 1,065,596 from STAR alignments. Both alignment algorithms, TopHat and STAR, report gap-sites with considerable false discovery rate, which can drastically be reduced by validation with gqs and wgis.
Aberrant DNA Methylation as a Biomarker and a Therapeutic Target of Cholangiocarcinoma
Authors: Nakaoka Toshiaki , Saito Yoshimasa , Saito Hidetsugu
Published: May 2017

Cholangiocarcinoma is an epithelial malignancy arising in the region between the intrahepatic bile ducts and the ampulla of Vater at the distal end of the common bile duct. The effect of current chemotherapy regimens against cholangiocarcinoma is limited, and the prognosis of patients with cholangiocarcinoma is poor. Aberrant DNA methylation and histone modification induce silencing of tumor suppressor genes and chromosomal instability during carcinogenesis. Studies have shown that the tumor suppressor genes and microRNAs (miRNAs) including MLH1, p14, p16, death-associated protein kinase (DAPK), miR-370 and miR-376c are frequently methylated in cholangiocarcinoma. Silencing of these tumor suppressor genes and miRNAs plays critical roles in the initiation and progression of cholangiocarcinoma. In addition, recent studies have demonstrated that DNA methylation inhibitors induce expression of endogenous retroviruses and exert the anti-tumor effect of via an anti-viral immune response. Aberrant DNA methylation of tumor suppressor genes and miRNAs could be a powerful biomarker for the diagnosis and treatment of cholangiocarcinoma. Epigenetic therapy with DNA methylation inhibitors holds considerable promise for the treatment of cholangiocarcinoma through the reactivation of tumor suppressor genes and miRNAs as well as the induction of an anti-viral immune response.
Newborn Screening for Primary Immune Deficiencies with a TREC/KREC/ACTB Triplex Assay—A Three-Year Pilot Study in Sweden
Authors: Zetterström Rolf , Barbaro Michela , Ohlsson Annika , Borte Stephan , Jonsson Susanne , Winiarski Jacek , Von Döbeln Ulrika , Hammarström Lennart
Published: May 2017

Background: Screening newborns for severe combined immunodeficiency (SCID) has become essential, since efficient methods to identify infants with these disorders exist and early stem cell transplantation is life-saving. Method: We performed a three-year screening trial in Stockholm comprised of 89,462 newborn infants. The number of T-cell receptor excision circle (TREC)/kappa-deleting recombination excision circle (KREC)/β-actin (ACTB) copies were quantified simultaneously by real time polymerase chain reaction (PCR) in 3.2 mm punches from dried blood samples taken in the regular neonatal screening program. Results: Five patients with immune deficiencies were identified: two with SCID caused by mutations in the Artemis- and adenosine deaminase gene, respectively, one with ataxia telangiectasia and two with reversible agammagloblinemia, which so far, is of unknown cause. This points to an incidence of SCID at the same level as in other studies (around 1:50,000). In 19 recalled infants, low KREC levels and in one case, also low TREC levels, were caused by immunosuppressive treatment of the mother during pregnancy. The levels normalized within a month in all these infants. The total recall rate was 0.10%, and 40% of the recalled infants were born prematurely (<37 weeks gestation). Among 69 patients with inborn errors of metabolism screened retrospectively, only two, who were severely ill with organic acidemias when the sample was taken, and two with mitochondrial disorders, screened positive.
A Novel Identity-Based Signcryption Scheme in the Standard Model
Authors: Huang Yueying , Yang Junjie
Published: May 2017

Identity-based signcryption is a useful cryptographic primitive that provides both authentication and confidentiality for identity-based crypto systems. It is challenging to build a secure identity-based signcryption scheme that can be proven secure in a standard model. In this paper, we address the issue and propose a novel construction of identity-based signcryption which enjoys IND-CCA security and existential unforgeability without resorting to the random oracle model. Comparisons demonstrate that the new scheme achieves stronger security, better performance efficiency and shorter system parameters.
Modelling Digital Knowledge Transfer: Nurse Supervisors Transforming Learning at Point of Care to Advance Nursing Practice
Authors: Mather Carey , Cummings Elizabeth
Published: May 2017

Limited adoption of mobile technology for informal learning and continuing professional development within Australian healthcare environments has been explained primarily as an issue of insufficient digital and ehealth literacy of healthcare professionals. This study explores nurse supervisors’ use of mobile technology for informal learning and continuing professional development both for their own professional practice, and in their role in modelling digital knowledge transfer, by facilitating the learning and teaching of nursing students in the workplace. A convenience sample of 27 nurse supervisors involved with guiding and supporting undergraduate nurses participated in one of six focus groups held in two states of Australia. Expanding knowledge emerged as the key theme of importance to this group of clinicians. Although nurse supervisors regularly browsed Internet sources for learning and teaching purposes, a mixed understanding of the mobile learning activities that could be included as informal learning or part of formal continuing professional development was detected. Participants need educational preparation and access to mobile learning opportunities to improve and maintain their digital and ehealth literacy to appropriately model digital professionalism with students. Implementation of mobile learning at point of care to enable digital knowledge transfer, augment informal learning for students and patients, and support continuing professional development opportunities is necessary. Embedding digital and ehealth literacy within nursing curricula will promote mobile learning as a legitimate nursing function and advance nursing practice.
Connecting the Dots: From an Easy Method to Computerized Species Determination
Authors: Niederegger Senta , Döge Klaus-Peter , Peter Marcus , Eickhölter Tobias , Mall Gita
Published: May 2017

Differences in growth rate of forensically important dipteran larvae make species determination an essential requisite for an accurate estimation of time since colonization of the body. Interspecific morphological similarities, however, complicate species determination. Muscle attachment site (MAS) patterns on the inside of the cuticula of fly larvae are species specific and grow proportionally with the animal. The patterns can therefore be used for species identification, as well as age estimation in forensically important dipteran larvae. Additionally, in species where determination has proven to be difficult—even when employing genetic methods—this easy and cheap method can be successfully applied. The method was validated for a number of Calliphoridae, as well as Sarcophagidae; for Piophilidae species, however, the method proved to be inapt. The aim of this article is to assess the utility of the MAS method for applications in forensic entomology. Furthermore, the authors are currently engineering automation for pattern acquisition in order to expand the scope of the method. Automation is also required for the fast and reasonable application of MAS for species determination. Using filters on digital microscope pictures and cross-correlating them within their frequency range allows for a calculation of the correlation coefficients. Such pattern recognition permits an automatic comparison of one larva with a database of MAS reference patterns in order to find the correct, or at least the most likely, species. This facilitates species determination in immature stages of forensically important flies and economizes time investment, as rearing to adult flies will no longer be required.
Depth Estimation for Lytro Images by Adaptive Window Matching on EPI
Authors: Lin Pei-Hsuan , Yeh Jeng-Sheng , Wu Fu-Che , Chuang Yung-Yu
Published: May 2017

A depth estimation algorithm from plenoptic images is presented. There are two stages to estimate the depth. First is the initial estimation base on the epipolar plane images (EPIs). Second is the refinement of the estimations. At the initial estimation, adaptive window matching is used to improve the robustness. The size of the matching window is based on the texture description of the sample patch. Based on the texture entropy, a smaller window is used for a fine texture. A smooth texture requires a larger window. With the adaptive window size, different reference patches based on various depth are constructed. Then the depth estimation compares the similarity among those patches to find the best matching patch. To improve the initial estimation, a refinement algorithm based on the Markov Random Field (MRF) optimization is used. An energy function keeps the data similar to the original estimation, and then the data are smoothed by minimizing the second derivative. Depth values should satisfy consistency across multiple views.
The Impact of Symmetry: Explaining Contradictory Results Concerning Working Memory, Reasoning, and Complex Problem Solving
Authors: Zech Alexandra , Bühner Markus , Kröner Stephan , Heene Moritz , Hilbert Sven
Published: May 2017

Findings of studies on the unique effects of reasoning and working memory regarding complex problem solving are inconsistent. To find out if these inconsistencies are due to a lack of symmetry between the studies, we reconsidered the findings of three published studies on this issue, which resulted in conflicting conclusions regarding the inter-relations between reasoning, working memory, and complex problem solving. This was achieved by analysing so far unpublished problem solving data from the study of Bühner, Krumm, Ziegler, and Plücken (2006) (N= 124). One of the three published studies indicated unique effects of working memory and reasoning on complex problem solving using aggregated scores, a second study found no unique contribution of working memory using only figural scores, and a third study reported a unique influence only for reasoning using only numerical scores. Our data featured an evaluation of differences across content facets and levels of aggregation of the working memory scores. Path models showed that the results of the first study could not be replicated using content aggregated scores; the results of the second study could be replicated if only figural scores were used, and the results of the third study could be obtained by using only numerical scores. For verbal content, none of the published results could be replicated. This leads to the assumption that not only symmetry is an issue when correlating non-symmetrical data, but that content also has to be taken into account when comparing different studies on the same topic.
NK Cells and Their Role in Invasive Mold Infection
Authors: Schmidt Stanislaw , Condorelli Annalisa , Koltze Antonia , Lehrnbecher Thomas
Published: May 2017

There is growing evidence that Natural Killer (NK) cells exhibit in vitro activity against both Aspergillus and non-Aspergillus molds. Cytotoxic molecules such as NK cell-derived perforin seem to play an important role in the antifungal activity. In addition, NK cells release a number of cytokines upon stimulation by fungi, which modulate both innate and adaptive host immune responses. Whereas the in vitro data of the antifungal activity of NK cells are supported by animal studies, clinical data are scarce to date.
The Tribological Performance of CrMoN/MoS2 Solid Lubrication Coating on a Piston Ring
Authors: Di Yuelan , Cai Zhihai , Zhang Ping
Published: May 2017

In order to improve the tribological properties of an engine piston ring and enhance its service life, magnetron sputtering technology and low temperature ion sulphurizing treatment technology were used to prepare CrMoN/MoS2 solid lubricant coating on the surface of an engine piston ring. The morphologies and compositions of the surface and cross-section of the sulfuration layer were analyzed by field emission scanning electron microscopy (FESEM), and wear property under high load, high speed and high temperature conditions were tested by a SRV®4 friction and wear testing machine. The results show that the CrMoN/MoS2 composite coatings appear as a dense grain structure, and the coating is an ideal solid lubrication layer that possesses an excellent high temperature wear resistance, reducing the engine operating temperature abrasion effectively and prolonging the service life of the engine.
In Situ Production of Copper Oxide Nanoparticles in a Binary Molten Salt for Concentrated Solar Power Plant Applications
Authors: Lasfargues Mathieu , Stead Graham , Amjad Muhammad , Ding Yulong , Wen Dongsheng
Published: May 2017

Seeding nanoparticles in molten salts has been shown recently as a promising way to improve their thermo-physical properties. The prospect of such technology is of interest to both academic and industrial sectors in order to enhance the specific heat capacity of molten salt. The latter is used in concentrated solar power plants as both heat transfer fluid and sensible storage. This work explores the feasibility of producing and dispersing nanoparticles with a novel one pot synthesis method. Using such a method, CuO nanoparticles were produced in situ via the decomposition of copper sulphate pentahydrate in a KNO3-NaNO3 binary salt. Analyses of the results suggested preferential disposition of atoms around produced nanoparticles in the molten salt. Thermal characterization of the produced nano-salt suspension indicated the dependence of the specific heat enhancement on particle morphology and distribution within the salts.
Effect of Graphite Nanoplate Morphology on the Dispersion and Physical Properties of Polycarbonate Based Composites
Authors: Müller Michael , Hilarius Konrad , Liebscher Marco , Lellinger Dirk , Alig Ingo , Pötschke Petra
Published: May 2017

The influence of the morphology of industrial graphite nanoplate (GNP) materials on their dispersion in polycarbonate (PC) is studied. Three GNP morphology types were identified, namely lamellar, fragmented or compact structure. The dispersion evolution of all GNP types in PC is similar with varying melt temperature, screw speed, or mixing time during melt mixing. Increased shear stress reduces the size of GNP primary structures, whereby the GNP aspect ratio decreases. A significant GNP exfoliation to individual or few graphene layers could not be achieved under the selected melt mixing conditions. The resulting GNP macrodispersion depends on the individual GNP morphology, particle sizes and bulk density and is clearly reflected in the composite’s electrical, thermal, mechanical, and gas barrier properties. Based on a comparison with carbon nanotubes (CNT) and carbon black (CB), CNT are recommended in regard to electrical conductivity, whereas, for thermal conductive or gas barrier application, GNP is preferred.
The Antifungal Activity of Functionalized Chitin Nanocrystals in Poly (Lactid Acid) Films
Authors: Salaberria Asier , H. Diaz Rene , Andrés María , Fernandes Susana , Labidi Jalel
Published: May 2017

As, in the market, poly (lactic acid) (PLA) is the most used polymer as an alternative to conventional plastics, and as functionalized chitin nanocrystals (CHNC) can provide structural and bioactive properties, their combination sounds promising in the preparation of functional nanocomposite films for sustainable packaging. Chitin nanocrystals were successfully modified via acylation using anhydride acetic and dodecanoyl chloride acid to improve their compatibility with the matrix, PLA. The nanocomposite films were prepared by extrusion/compression approach using different concentrations of both sets of functionalized CHNC. This investigation brings forward that both sets of modified CHNC act as functional agents, i.e., they slightly improved the hydrophobic character of the PLA nanocomposite films, and, very importantly, they also enhanced their antifungal activity. Nonetheless, the nanocomposite films prepared with the CHNC modified with dodecanoyl chloride acid presented the best properties.
DFT Study of the Oxygen Reduction Reaction Activity on Fe−N4-Patched Carbon Nanotubes: The Influence of the Diameter and Length
Authors: Chen Xin , Hu Rui , Bai Fan
Published: May 2017

The influences of diameter and length of the Fe−N4-patched carbon nanotubes (Fe−N4/CNTs) on oxygen reduction reaction (ORR) activity were investigated by density functional theory method using the BLYP/DZP basis set. The results indicate that the stability of the Fe−N4 catalytic site in Fe−N4/CNTs will be enhanced with a larger tube diameter, but reduced with shorter tube length. A tube with too small a diameter makes a Fe−N4 site unstable in acid medium since Fe−N and C−N bonds must be significantly bent at smaller diameters due to hoop strain. The adsorption energy of the ORR intermediates, especially of the OH group, becomes weaker with the increase of the tube diameter. The OH adsorption energy of Fe−N4/CNT with the largest tube diameter is close to that on Pt(111) surface, indicating that its catalytic property is similar to Pt. Electronic structure analysis shows that the OH adsorption energy is mainly controlled by the energy levels of Fe 3d orbital. The calculation results uncover that Fe−N4/CNTs with larger tube diameters and shorter lengths will exhibit better ORR activity and stability.
Scaling Effects on Materials Tribology: From Macro to Micro Scale
Authors: Stoyanov Pantcho , Chromik Richard
Published: May 2017

The tribological study of materials inherently involves the interaction of surface asperities at the micro to nanoscopic length scales. This is the case for large scale engineering applications with sliding contacts, where the real area of contact is made up of small contacting asperities that make up only a fraction of the apparent area of contact. This is why researchers have sought to create idealized experiments of single asperity contacts in the field of nanotribology. At the same time, small scale engineering structures known as micro- and nano-electromechanical systems (MEMS and NEMS) have been developed, where the apparent area of contact approaches the length scale of the asperities, meaning the real area of contact for these devices may be only a few asperities. This is essentially the field of microtribology, where the contact size and/or forces involved have pushed the nature of the interaction between two surfaces towards the regime where the scale of the interaction approaches that of the natural length scale of the features on the surface. This paper provides a review of microtribology with the purpose to understand how tribological processes are different at the smaller length scales compared to macrotribology. Studies of the interfacial phenomena at the macroscopic length scales (e.g., using in situ tribometry) will be discussed and correlated with new findings and methodologies at the micro-length scale.
Experiment and Artificial Neural Network Prediction of Thermal Conductivity and Viscosity for Alumina-Water Nanofluids
Authors: Zhao Ningbo , Li Zhiming
Published: May 2017

To effectively predict the thermal conductivity and viscosity of alumina (Al2O3)-water nanofluids, an artificial neural network (ANN) approach was investigated in the present study. Firstly, using a two-step method, four Al2O3-water nanofluids were prepared respectively by dispersing different volume fractions (1.31%, 2.72%, 4.25%, and 5.92%) of nanoparticles with the average diameter of 30 nm. On this basis, the thermal conductivity and viscosity of the above nanofluids were analyzed experimentally under various temperatures ranging from 296 to 313 K. Then a radial basis function (RBF) neural network was constructed to predict the thermal conductivity and viscosity of Al2O3-water nanofluids as a function of nanoparticle volume fraction and temperature. The experimental results showed that both nanoparticle volume fraction and temperature could enhance the thermal conductivity of Al2O3-water nanofluids. However, the viscosity only depended strongly on Al2O3 nanoparticle volume fraction and was increased slightly by changing temperature. In addition, the comparative analysis revealed that the RBF neural network had an excellent ability to predict the thermal conductivity and viscosity of Al2O3-water nanofluids with the mean absolute percent errors of 0.5177% and 0.5618%, respectively. This demonstrated that the ANN provided an effective way to predict the thermophysical properties of nanofluids with limited experimental data.
Facile Synthesis of Gold Nanoparticles with Alginate and Its Catalytic Activity for Reduction of 4-Nitrophenol and H2O2 Detection
Authors: Zhao Xihui , Li Zichao , Deng Yujia , Zhao Zhihui , Li Xiaowen , Xia Yanzhi
Published: May 2017

Gold nanoparticles (AuNPs) were synthesized using a facile solvothermal method with alginate sodium as both reductant and stabilizer. Formation of AuNPs was confirmed by UV-vis spectroscopic analysis. The synthesized AuNPs showed a localized surface plasmon resonance at approximately 520–560 nm. The AuNPs were characterized using transmission electron microscopy, X-ray diffraction and dynamic light scattering. Transmission electron microscopy revealed that the AuNPs were mostly nanometer-sized spherical particles. Powder X-ray diffraction analysis proved the formation of face-centered cubic structure of Au. Catalytic reduction of 4-nitrophenol was monitored via spectrophotometry using AuNPs as catalyst, and further a non-enzymatic sensor was fabricated. The results demonstrated that AuNPs presented excellent catalytic activity and provided a sensitive response to H2O2 detection.
Unusual Enhancement of Doxorubicin Activity on Co-Delivery with Polyhedral Oligomeric Silsesquioxane (POSS)
Authors: Sobierajska Ewelina , Konopka Malgorzata , Janaszewska Anna , Piorecka Kinga , Blauz Andrzej , Klajnert-Maculewicz Barbara , Stanczyk Maciej , Stanczyk Wlodzimierz
Published: May 2017

Polyhedral oligomeric silsesquioxane (POSS), bearing eight 3-chloroammoniumpropyl substituents, was studied as a potential nanocarrier in co-delivery systems with doxorubicin (DOX). The toxicity of doxorubicin and POSS:DOX complexes at four different molar ratios (1:1; 1:2, 1:4, 1:8) towards microvascular endothelial cells (HMEC-1), breast cancer cells (MCF-7), and human cervical cancer endothelial cells (HeLa) was determined. The rate of penetration of the components into the cells, their cellular localization and the hydrodynamic diameter of the complexes was also determined. A cytotoxicity profile of POSS:DOX complexes indicated that the POSS:DOX system at the molar ratio of 1:8 was more effective than free DOX. Confocal images showed that DOX co-delivery with POSS allowed for more effective penetration of doxorubicin through the cell membrane. Taking all the results into account, it can be claimed that the polyhedral oligomeric silsesquioxane (T8-POSS) is a promising, complex nanocarrier for doxorubicin delivery.
Modelling of Fluidised Geomaterials: The Case of the Aberfan and the Gypsum Tailings Impoundment Flowslides
Authors: Dutto Paola , Stickle Miguel , Pastor Manuel , Manzanal Diego , Yague Angel , Moussavi Tayyebi Saeid , Lin Chuan , Elizalde Maria
Published: May 2017

The choice of a pure cohesive or a pure frictional viscoplastic model to represent the rheological behaviour of a flowslide is of paramount importance in order to obtain accurate results for real cases. The principal goal of the present work is to clarify the influence of the type of viscous model—pure cohesive versus pure frictional—with the numerical reproduction of two different real flowslides that occurred in 1966: the Aberfan flowslide and the Gypsum tailings impoundment flowslide. In the present work, a depth-integrated model based on the v - p w Biot–Zienkiewicz formulation, enhanced with a diffusion-like equation to account for the pore pressure evolution within the soil mass, is applied to both 1966 cases. For the Aberfan flowslide, a frictional viscous model based on Perzyna viscoplasticity is considered, while a pure cohesive viscous model (Bingham model) is considered for the case of the Gypsum flowslide. The numerical approach followed is the SPH method, which has been enriched by adding a 1D finite difference grid to each SPH node in order to improve the description of the pore water evolution in the propagating mixture. The results obtained by the performed simulations are in agreement with the documentation obtained through the UK National Archive (Aberfan flowslide) and the International Commission of large Dams (Gypsum flowslide).
Dye-Sensitized Molecular Charge Transfer Complexes: Magnetic and Conduction Properties in the Photoexcited States of Ni(dmit)2 Salts Containing Photosensitive Dyes
Authors: Yamamoto Ryoma , Yamamoto Takashi , Ohara Keishi , Naito Toshio
Published: May 2017

Photosensitive dyes often induce charge transfer (CT) between adjacent chemical species and themselves under irradiation of appropriate wavelengths. Because of the reversibility and selectivity of such CT, it is considered to be interesting to utilize such dyes as optically controllable trigger components for conduction and magnetism in the photoexcited states of organic materials. Based on this idea, such a type of new salts, i.e., γ- and δ-DiCC[Ni(dmit)2] in addition to DiCC2[Ni(dmit)2]3 have been prepared, characterized and their physical and structural properties have been examined both under dark and irradiated conditions (dmit2− = 1,3-dithiole-2-thione-4,5-dithiolate, DiCC+ = 3,3′-Dihexyloxacarbocyanine monocation). Among them, under UV (254–450 nm) irradiation, δ-DiCC[Ni(dmit)2] exhibited photoconductivity being six times as high as its dark conductivity at room temperature. The electron spin resonance (ESR) spectra have demonstrated that there are photoexcited spins on both DiCC and [Ni(dmit)2] species as a result of the CT transition between them, serving as localized spins (DiCC) and carriers ([Ni(dmit)2]), respectively. The results obtained in this work have indicated that the strategy mentioned above is effective in developing organic photoresponsive semiconductors with paramagnetism.
A Two-Stage Method for Piecewise-Constant Solution for Fredholm Integral Equations of the First Kind
Authors: Lin Fu-Rong , Yang Shi-Wei
Published: May 2017

A numerical method is proposed for estimating piecewise-constant solutions for Fredholm integral equations of the first kind. Two functionals, namely the weighted total variation (WTV) functional and the simplified Modica-Mortola (MM) functional, are introduced. The solution procedure consists of two stages. In the first stage, the WTV functional is minimized to obtain an approximate solution f TV * . In the second stage, the simplified MM functional is minimized to obtain the final result by using the damped Newton (DN) method with f TV * as the initial guess. The numerical implementation is given in detail, and numerical results of two examples are presented to illustrate the efficiency of the proposed approach.
Marine Fish Proteins and Peptides for Cosmeceuticals: A Review
Authors: Venkatesan Jayachandran , Anil Sukumaran , Kim Se-Kwon , Shim Min
Published: May 2017

Marine fish provide a rich source of bioactive compounds such as proteins and peptides. The bioactive proteins and peptides derived from marine fish have gained enormous interest in nutraceutical, pharmaceutical, and cosmeceutical industries due to their broad spectrum of bioactivities, including antioxidant, antimicrobial, and anti-aging activities. Recently, the development of cosmeceuticals using marine fish-derived proteins and peptides obtained from chemical or enzymatical hydrolysis of fish processing by-products has increased rapidly owing to their activities in antioxidation and tissue regeneration. Marine fish-derived collagen has been utilized for the development of cosmeceutical products due to its abilities in skin repair and tissue regeneration. Marine fish-derived peptides have also been utilized for various cosmeceutical applications due to their antioxidant, antimicrobial, and matrix metalloproteinase inhibitory activities. In addition, marine fish-derived proteins and hydrolysates demonstrated efficient anti-photoaging activity. The present review highlights and presents an overview of the current status of the isolation and applications of marine fish-derived proteins and peptides. This review also demonstrates that marine fish-derived proteins and peptides have high potential for biocompatible and effective cosmeceuticals.
Lobophorin K, a New Natural Product with Cytotoxic Activity Produced by Streptomyces sp. M-207 Associated with the Deep-Sea Coral Lophelia pertusa
Authors: Braña Alfredo , Sarmiento-Vizcaíno Aida , Osset Miguel , Pérez-Victoria Ignacio , Martín Jesús , De Pedro Nuria , De la Cruz Mercedes , Díaz Caridad , Vicente Francisca , Reyes Fernando , García Luis , Blanco Gloria
Published: May 2017

The present article describes the isolation of a new natural product of the lobophorin family, designated as lobophorin K (1), from cultures of the marine actinobacteria Streptomyces sp. M-207, previously isolated from the cold-water coral Lophelia pertusa collected at 1800 m depth during an expedition to the submarine Avilés Canyon. Its structure was determined using a combination of spectroscopic techniques, mainly ESI-TOF MS and 1D and 2D NMR. This new natural product displayed cytotoxic activity against two human tumor cell lines, such as pancreatic carcinoma (MiaPaca-2) and breast adenocarcinoma (MCF-7). Lobophorin K also displayed moderate and selective antibiotic activity against pathogenic Gram-positive bacteria such as Staphylococcus aureus.
Medicinal Plants Used for Neuropsychiatric Disorders Treatment in the Hauts Bassins Region of Burkina Faso
Authors: Kinda Prosper , Zerbo Patrice , Guenné Samson , Compaoré Moussa , Ciobica Alin , Kiendrebeogo Martin
Published: May 2017

Background: In Burkina Faso, phytotherapy is the main medical alternative used by populations to manage various diseases that affect the nervous system. The aim of the present study was to report medicinal plants with psychoactive properties used to treat neuropsychiatric disorders in the Hauts Bassins region, in the western zone of Burkina Faso. Methods: Through an ethnobotanical survey using structured questionnaire, 53 traditional healers (TH) were interviewed about neuropsychiatric disorders, medicinal plants and medical practices used to treat them. The survey was carried out over a period of three months. Results: The results report 66 plant species used to treat neuropsychiatric pathologies. Roots (36.2%) and leaves (29%) were the main plant parts used. Alone or associated, these parts were used to prepare drugs using mainly the decoction and the trituration methods. Remedies were administered via drink, fumigation and external applications. Conclusions: It appears from this study a real knowledge of neuropsychiatric disorders in the traditional medicine of Hauts Bassins area. The therapeutic remedies suggested in this work are a real interest in the fight against psychiatric and neurological diseases. In the future, identified plants could be used for searching antipsychotic or neuroprotective compounds.
A Review on Lattice Defects in Graphene: Types, Generation, Effects and Regulation
Authors: Tian Wenchao , Li Wenhua , Yu Wenbo , Liu Xiaohan
Published: May 2017

Graphene, having a perfect two-dimensional crystal structure, has many excellent features such as a high specific surface area, and extraordinary electrical, thermal and mechanical properties. However, during the production process, lattice defects will inevitably be produced. Therefore, the performance of graphene with various defects is much lower than its theoretical value. We summarize the major advances of research into graphene defects in engineering in this paper. Firstly, the main types and causes of defects in graphene are introduced. Secondly, the influence of different defects in graphene on the chemical, electronic, magnetic and mechanical properties is discussed. Also, the control methods of graphene defects are reviewed. Finally, we propose the future challenges and prospects for the study of the defects of graphene and other nano-carbon materials.
Microtechnologies for Cell Microenvironment Control and Monitoring
Authors: Azuaje-Hualde Enrique , García-Hernando Maite , Etxebarria-Elezgarai Jaione , De Pancorbo Marian , Benito-Lopez Fernando , Basabe-Desmonts Lourdes
Published: May 2017

A great breadth of questions remains in cellular biology. Some questions cannot be answered using traditional analytical techniques and so demand the development of new tools for research. In the near future, the development of highly integrated microfluidic analytical platforms will enable the acquisition of unknown biological data. These microfluidic systems must allow cell culture under controlled microenvironment and high throughput analysis. For this purpose, the integration of a variable number of newly developed micro- and nano-technologies, which enable control of topography and surface chemistry, soluble factors, mechanical forces and cell–cell contacts, as well as technology for monitoring cell phenotype and genotype with high spatial and temporal resolution will be necessary. These multifunctional devices must be accompanied by appropriate data analysis and management of the expected large datasets generated. The knowledge gained with these platforms has the potential to improve predictive models of the behavior of cells, impacting directly in better therapies for disease treatment. In this review, we give an overview of the microtechnology toolbox available for the design of high throughput microfluidic platforms for cell analysis. We discuss current microtechnologies for cell microenvironment control, different methodologies to create large arrays of cellular systems and finally techniques for monitoring cells in microfluidic devices.
Regulatory and Safety Requirements for Food Cultures
Authors: Laulund Svend , Wind Anette , Derkx Patrick , Zuliani Véronique
Published: May 2017

The increased use of food cultures to ferment perishable raw materials has potentiated the need for regulations to assess and assure the safety of food cultures and their uses. These regulations differ from country to country, all aimed at assuring the safe use of food cultures which has to be guaranteed by the food culture supplier. Here we highlight national differences in regulations and review a list of methods and methodologies to assess the safety of food cultures at strain level, at production, and in the final product.
Crystal Chemistry and Stability of Hydrated Rare-Earth Phosphates Formed at Room Temperature
Authors: Ochiai Asumi , Utsunomiya Satoshi
Published: May 2017

In order to understand the crystal chemical properties of hydrous rare-earth (RE) phosphates, REPO4,hyd, that form at ambient temperature, we have synthesized REPO4,hyd through the interaction of aqueous RE elements (REEs) with aqueous P at room temperature at pH < 6, where the precipitation of RE hydroxides does not occur, and performed rigorous solid characterization. The second experiment was designed identically except for using hydroxyapatite (HAP) crystals as the P source at pH constrained by the dissolved P. Hydrated RE phosphate that precipitated at pH 3 after 3 days was classified into three groups: LREPO4,hyd (La → Gd) containing each REE from La-Gd, MREPO4,hyd (Tb → Ho), and HREPO4,hyd (Er → Lu). The latter two groups included increasing fractions of an amorphous component with increasing ionic radius, which was associated with non-coordinated water. REallPO4,hyd that contains all lanthanides except Pm transformed to rhabdophane structure over 30 days of aging. In the experiments using HAP, light REEs were preferentially distributed into nano-crystals, which can potentially constrain initial RE distributions in aqueous phase. Consequently, the mineralogical properties of hydrous RE phosphates forming at ambient temperature depend on the aging, the pH of the solution, and the average ionic radii of REE, similarly to the well-crystalline RE phosphates.
The Impact of Halloysite on the Thermo-Mechanical Properties of Polymer Composites
Authors: Gaaz Tayser , Sulong Abu , Kadhum Abdul , Al-Amiery Ahmed , Nassir Mohamed , Jaaz Ahed
Published: May 2017

Nanotubular clay minerals, composed of aluminosilicate naturally structured in layers known as halloysite nanotubes (HNTs), have a significant reinforcing impact on polymer matrixes. HNTs have broad applications in biomedical applications, the medicine sector, implant alloys with corrosion protection and manipulated transportation of medicines. In polymer engineering, different research studies utilize HNTs that exhibit a beneficial enhancement in the properties of polymer-based nanocomposites. The dispersion of HNTs is improved as a result of pre-treating HNTs with acids. The HNTs’ percentage additive up to 7% shows the highest improvement of tensile strength. The degradation of the polymer can be also significantly improved by doping a low percentage of HNTs. Both the mechanical and thermal properties of polymers were remarkably improved when mixed with HNTs. The effects of HNTs on the mechanical and thermal properties of polymers, such as ultimate strength, elastic modulus, impact strength and thermal stability, are emphasized in this study.
Methodical Challenges and a Possible Resolution in the Assessment of Receptor Reserve for Adenosine, an Agonist with Short Half-Life
Authors: Zsuga Judit , Erdei Tamas , Szabó Katalin , Lampe Nora , Papp Csaba , Pinter Akos , Szentmiklosi Andras , Juhasz Bela , Szilvássy Zoltán , Gesztelyi Rudolf
Published: May 2017

The term receptor reserve, first introduced and used in the traditional receptor theory, is an integrative measure of response-inducing ability of the interaction between an agonist and a receptor system (consisting of a receptor and its downstream signaling). The underlying phenomenon, i.e., stimulation of a submaximal fraction of receptors can apparently elicit the maximal effect (in certain cases), provides an opportunity to assess the receptor reserve. However, determining receptor reserve is challenging for agonists with short half-lives, such as adenosine. Although adenosine metabolism can be inhibited several ways (in order to prevent the rapid elimination of adenosine administered to construct concentration–effect (E/c) curves for the determination), the consequent accumulation of endogenous adenosine biases the results. To address this problem, we previously proposed a method, by means of which this bias can be mathematically corrected (utilizing a traditional receptor theory-independent approach). In the present investigation, we have offered in silico validation of this method by simulating E/c curves with the use of the operational model of agonism and then by evaluating them using our method. We have found that our method is suitable to reliably assess the receptor reserve for adenosine in our recently published experimental setting, suggesting that it may be capable for a qualitative determination of receptor reserve for rapidly eliminating agonists in general. In addition, we have disclosed a possible interference between FSCPX (8-cyclopentyl-N3-[3-(4-(fluorosulfonyl)benzoyloxy)propyl]-N1-propylxanthine), an irreversible A1 adenosine receptor antagonist, and NBTI (S-(2-hydroxy-5-nitrobenzyl)-6-thioinosine), a nucleoside transport inhibitor, i.e., FSCPX may blunt the effect of NBTI.
Exploring the Pivotal Role of the CK2 Hinge Region Sub-Pocket in Binding with Tricyclic Quinolone Analogues by Computational Analysis
Authors: Zhou Yue , Zhang Na , Tang Shan , Qi Xiaoqian , Zhao Lijiao , Zhong Rugang , Peng Yongzhen
Published: May 2017

Protein kinase CK2 has been considered as an attractive therapeutic target of cancer therapy. The tricyclic quinoline compound CX-4945 is the first representative of CK2 inhibitors used in human clinical trials. The binding of non-2,6-naphtyridine substituted compounds 27e (IC50 > 500 nM) and 27h (IC50 > 1000 nM) to CK2 is abolished. However, the unbinding mechanisms due to the key pharmacophore group replacement of compounds 27e and 27h are unveiled. In the present work, combined computational analysis was performed to investigate the underlying structural basis of the low-affinity of two systems. As indicated in the results, the loss of hydrogen bonds between the non-2,6-naphtyridine and the hinge region destroyed the proper recognition of the two complexes. Besides, the allosteric mechanisms between the deviated ligands and the changed regions (G-loop, C-loop and β4/β5 loop) are proposed. Furthermore, energetic analysis was evaluated by detailed energy calculation and residue-based energy decomposition. More importantly, the summary of known polar pharmacophore groups elucidates the pivotal roles of hinge region sub-pocket in the binding of CK2 inhibitors. These results provide rational clues to the fragment-based design of more potent CK2 inhibitors.
Functional Mitochondria Are Important for the Effect of Resveratrol
Authors: Widlund Anne , Baral Kaushal , Dalgaard Louise , Vang Ole
Published: May 2017

Resveratrol (Resv) is a polyphenol reported to modulate mitochondrial activity. The aim was to use HeLa and 143B cells to characterize the action of Resv on mitochondrial activity, cell size and proliferation using wild type (WT) and Rho 0 cells deficient in mitochondrial DNA. In both HeLa WT and Rho 0 cells, the oxygen consumption rate (OCR) was increased at 20 µM Resv after 24 h, whereas only a non-significant increase of OCR was observed in 143B WT cells. Resv decreased cell number concentration-dependently in both WT and Rho 0 cell types. An increased cell diameter was observed in HeLa WT, but not in Rho 0 when treated with Resv. Overall, the findings presented indicate that functional mitochondria are a prerequisite for cell enlargement by Resv.
Synthesis and Excellent Duplex Stability of Oligonucleotides Containing 2′-Amino-LNA Functionalized with Galactose Units
Authors: Kumar Rajesh , Ries Annika , Wengel Jesper
Published: May 2017

A convenient method for the preparation of oligonucleotides containing internally-attached galactose and triantennary galactose units has been developed based on click chemistry between 2′-N-alkyne 2′-amino-LNA nucleosides and azido-functionalized galactosyl building blocks. The synthesized oligonucleotides show excellent binding affinity and selectivity towards complementary DNA/RNA strands with an increase in the melting temperature of up to +23.5 °C for triply-modified variants.