bluuebunny/crossref_metadata_2025 huggingface dataset:
Effects of Prolonged Dietary Curcumin Exposure on Skeletal Muscle Biochemical and Functional Responses of Aged Male Rats
Authors: Receno Candace N. , Liang Chen , Korol Donna L. , Atalay Mustafa , Heffernan Kevin S. , Brutsaert Tom D. , DeRuisseau Keith C.
Published: March 2019

Oxidative stress resulting from decreased antioxidant protection and increased reactive oxygen and nitrogen species (RONS) production may contribute to muscle mass loss and dysfunction during aging. Curcumin is a phenolic compound shown to upregulate antioxidant defenses and directly quench RONS in vivo. This study determined the impact of prolonged dietary curcumin exposure on muscle mass and function of aged rats. Thirty-two-month-old male F344xBN rats were provided a diet with or without 0.2% curcumin for 4 months. The groups included: ad libitum control (CON; n = 18); 0.2% curcumin (CUR; n = 18); and pair-fed (PAIR; n = 18) rats. CUR rats showed lower food intake compared to CON, making PAIR a suitable comparison group. CUR rats displayed larger plantaris mass and force production (vs. PAIR). Nuclear fraction levels of nuclear factor erythroid-2 related-factor-2 were greater, and oxidative macromolecule damage was lower in CUR (vs. PAIR). There were no significant differences in measures of antioxidant status between any of the groups. No difference in any measure was observed between CUR and CON rats. Thus, consumption of curcumin coupled with reduced food intake imparted beneficial effects on aged skeletal muscle. The benefit of curcumin on aging skeletal muscle should be explored further.
Molecular Imaging of Vascular Calcification with 18F-Sodium-Fluoride in Patients Infected with Human Immunodeficiency Virus
Authors: Raggi Paolo , Prandini Napoleone , Ligabue Guido , Braglia Giovanni , Esposito Francesco , Milic Jovana , Malagoli Andrea , Scaglioni Riccardo , Besutti Giulia , Beghetto Barbara , Nardini Giulia , Roncaglia Enrica , Mussini Cristina , Guaraldi Giovanni
Published: March 2019

18F-Sodium Fluoride (NaF) accumulates in areas of active hydroxyapatite deposition and potentially unstable atherosclerotic plaques. We assessed the presence of atherosclerotic plaques in 50 adult patients with HIV (HIV+) who had undergone two cardiac computed tomography scans to measure coronary artery calcium (CAC) progression. CAC and its progression are predictive of an unfavorable prognosis. Tracer uptake was quantified in six arterial territories: aortic arch, innominate carotid artery, right and left internal carotid arteries, left coronary (anterior descending and circumflex) and right coronary artery. Thirty-one patients showed CAC progression and 19 did not. At least one territory with high NaF uptake was observed in 150 (50%) of 300 arterial territories. High NaF uptake was detected more often in non-calcified than calcified areas (68% vs. 32%), and in patients without than in those with prior CAC progression (68% vs. 32%). There was no correlation between clinical and demographic variables and NaF uptake. In clinically stable HIV+ patients, half of the arterial territories showed a high NaF uptake, often in the absence of macroscopic calcification. NaF uptake at one time point did not correlate with prior progression of CAC. Prospective studies will demonstrate the prognostic significance of high NaF uptake in HIV+ patients.
Polyphenols and IUGR Pregnancies: Effects of Maternal Hydroxytyrosol Supplementation on Placental Gene Expression and Fetal Antioxidant Status, DNA-Methylation and Phenotype
Authors: Garcia-Contreras Consolación , Vazquez-Gomez Marta , Barbero Alicia , Pesantez José Luis , Zinellu Angelo , Berlinguer Fiammetta , Gonzalez-Añover Pedro , Gonzalez Jorge , Encinas Teresa , Torres-Rovira Laura , Nuñez Yolanda , Ballesteros Jaime , Ayuso Miriam , Astiz Susana , Isabel Beatriz , Ovilo Cristina , Gonzalez-Bulnes Antonio
Published: March 2019

The use of polyphenols is a promising strategy for preventing or alleviating intrauterine growth restriction (IUGR) because polyphenol supplementation increases plasma antioxidant capacity and improves oxidative stress at the feto-placental unit; which are recognized as main issues in IUGR. However, there is a scarcity of experimental data on both realistic benefits and potential hazards of polyphenol supplementation during gestation. Hence, we aimed to use a swine model of IUGR pregnancy to determine possible effects of maternal supplementation with polyphenols (hydroxytyrosol) on placental expression of genes involved in antioxidant homeostasis, vascularization and fetal growth and thus on antioxidant status, DNA-methylation and phenotypic traits (morphology and homeostasis) of the fetus. Hydroxytyrosol improves placental gene expression and fetal antioxidant status and glucose metabolism in a sex-dependent manner, in which males were favored in spite of developmental failures. Concomitantly, hydroxytyrosol prevented hypomethylation of DNA associated with oxidative stress. Finally, no major deleterious effects of hydroxytyrosol supplementation on constriction of the ductus arteriosus, a possible secondary effect of polyphenols during pregnancy, were found.
Population Substructure Has Implications in Validating Next-Generation Cancer Genomics Studies with TCGA
Authors: Miller Marina D. , Devor Eric J. , Salinas Erin A. , Newtson Andreea M. , Goodheart Michael J. , Leslie Kimberly K. , Gonzalez-Bosquet Jesus
Published: March 2019

In the era of large genetic and genomic datasets, it has become crucially important to validate results of individual studies using data from publicly available sources, such as The Cancer Genome Atlas (TCGA). However, how generalizable are results from either an independent or a large public dataset to the remainder of the population? The study presented here aims to answer that question. Utilizing next generation sequencing data from endometrial and ovarian cancer patients from both the University of Iowa and TCGA, genomic admixture of each population was analyzed using STRUCTURE and ADMIXTURE software. In our independent data set, one subpopulation was identified, whereas in TCGA 4–6 subpopulations were identified. Data presented here demonstrate how different the genetic substructures of the TCGA and University of Iowa populations are. Validation of genomic studies between two different population samples must be aware of, account for and be corrected for background genetic substructure.
Related Stocks Selection with Data Collaboration Using Text Mining
Authors: Hirano Masanori , Sakaji Hiroki , Kimura Shoko , Izumi Kiyoshi , Matsushima Hiroyasu , Nagao Shintaro , Kato Atsuo
Published: March 2019

We propose an extended scheme for selecting related stocks for themed mutual funds. This scheme was designed to support fund managers who are building themed mutual funds. In our preliminary experiments, building a themed mutual fund was found to be quite difficult. Our scheme is a type of natural language processing method and based on words extracted according to their similarity to a theme using word2vec and our unique similarity based on co-occurrence in company information. We used data including investor relations and official websites as company information data. We also conducted several other experiments, including hyperparameter tuning, in our scheme. The scheme achieved a 172% higher F1 score and 21% higher accuracy than a standard method. Our research also showed the possibility that official websites are not necessary for our scheme, contrary to our preliminary experiments for assessing data collaboration.
Hybrid LSTM Neural Network for Short-Term Traffic Flow Prediction
Authors: Xiao Yuelei , Yin Yang
Published: March 2019

The existing short-term traffic flow prediction models fail to provide precise prediction results and consider the impact of different traffic conditions on the prediction results in an actual traffic network. To solve these problems, a hybrid Long Short–Term Memory (LSTM) neural network is proposed, based on the LSTM model. Then, the structure and parameters of the hybrid LSTM neural network are optimized experimentally for different traffic conditions, and the final model is compared with the other typical models. It is found that the prediction error of the hybrid LSTM model is obviously less than those of the other models, but the running time of the hybrid LSTM model is only slightly longer than that of the LSTM model. Based on the hybrid LSTM model, the vehicle flows of each road section and intersection in the actual traffic network are further predicted. The results show that the maximum relative error between the actual and predictive vehicle flows of each road section is 1.03%, and the maximum relative error between the actual and predictive vehicle flows of each road intersection is 1.18%. Hence, the hybrid LSTM model is closer to the accuracy and real-time requirements of short-term traffic flow prediction, and suitable for different traffic conditions in the actual traffic network.
Electronic Communication between Dithiolato-Bridged Diiron Carbonyl and S-Bridged Redox-Active Centres
Authors: Tard Cédric , Borg Stacey J. , Fairhurst Shirley A. , Pickett Christopher J. , Best Stephen P.
Published: March 2019

The catalytic potential of linked redox centres is exemplified by the catalytic site of [FeFe]-hydrogenases, which feature a diiron subsite linked by a cysteinyl S atom to a 4Fe4S cube. The investigation of systems possessing similarly-linked redox sites is important because it provides a context for understanding the biological system and the rational design of abiological catalysts. The structural, electrochemical and spectroscopic properties of Fe2(CO)5(CH3C(CH2S)2CH2SPhNO2, I-bzNO2 and the aniline analogue, I-bzNH2, are described and IR spectroelectrochemical studies have allowed investigation of the reduction products and their reactions with CO and protons. These measurements have allowed identification of the nitrobenzenyl radical anion, quantification of the shifts of the (CO) bands on ligand-based reduction compared with NO2/NH2 exchange and protonation of the pendent ligand. The strength of thioether coordination is related to the electronic effects, where competitive binding studies with CO show that CO/thioether exchange can be initiated by redox processes of the pendent ligand. Stoichiometric multi electron/proton transfer reactions of I-bzNO2 localised on nitrobenzene reductions occur at mild potentials and a metal-centred reduction in the presence of protons does not lead to significant electrocatalytic proton reduction.
Predictors of Discordance in the Assessment of Skeletal Muscle Mass between Computed Tomography and Bioimpedance Analysis
Authors: Jo Min Ho , Lim Tae Seop , Jeon Mi Young , Lee Hye Won , Kim Beom Kyung , Park Jun Yong , Kim Do Young , Ahn Sang Hoon , Han Kwang-Hyub , Kim Seung Up
Published: March 2019

Computed tomography (CT) and bioimpedance analysis (BIA) can assess skeletal muscle mass (SMM). Our objective was to identify the predictors of discordance between CT and BIA in assessing SMM. Participants who received a comprehensive medical health check-up between 2010 and 2018 were recruited. The CT and BIA-based diagnostic criteria for low SMM are as follows: Defined CT cutoff values (lumbar skeletal muscle index (LSMI) <1 standard deviation (SD) and means of 46.12 cm2/m2 for men and 34.18 cm2/m2 for women) and defined BIA cutoff values (appendicular skeletal muscle/height2 <7.0 kg/m2 for men and <5.7 kg/m2 for women). A total of 1163 subjects were selected. The crude and body mass index (BMI)-adjusted SMM assessed by CT were significantly associated with those assessed by BIA (correlation coefficient = 0.78 and 0.68, respectively; p < 0.001). The prevalence of low SMM was 15.1% by CT and 16.4% by BIA. Low SMM diagnosed by CT was significantly associated with advanced age, female gender, and lower serum albumin level, whereas low SMM diagnosed by BIA was significantly associated with advanced age, female gender, and lower BMI (all p < 0.05). Upon multivariate analysis, age >65 years, female and BMI <25 kg/m2 had significantly higher risks of discordance than their counterparts (all p < 0.05). We found a significant association between SMM assessed by CT and BIA. SMM assessment using CT and BIA should be interpreted cautiously in older adults (>65 years of age), female and BMI <25 kg/m2.
Preparation and Thermal Analysis of Blended Nanoaluminum/Fluorinated Polyether-Segmented Urethane Composites
Authors: Baxter Chance Melvin , McCollum Jena , Iacono Scott Thomas
Published: March 2019

The thermally induced reaction of aluminum fuel and a fluoropolymer oxidizer such as polytetrafluoroethylene (via C-F activation) has been a well-studied thermite event for slow-burning pyrolants among a multitude of energetic applications. Generally, most metallized thermoplastic fluoropolymers suffer from manufacturing limitations using common melt or solvent processing techniques due to the inherent low surface energy and high crystallinity of fluoropolymers. In this report, we prepared an energetic composite utilizing the versatility of urethane-based polymers and provide a comparative thermal characterization study. Specifically, a thermite formulation comprising of nanometer-sized aluminum (nAl) fuel coated with perfluoropolyether (PFPE) oxidizer was solvent-blended with either a polyethylene glycol (PEG) or PFPE-segmented urethane copolymer. Thermal data were collected with calorimetric and thermogravimetric techniques to determine glass transition temperature and decomposition temperature, which showed modest effects upon various loadings of PFPE-coated nAl in the urethane matrix. While our application focus was for energetics, this study also demonstrates the potential to expand the ability to broadly manufacture structural metallized composites to their consideration as coatings, foams, or fibers.
Numerical and Experimental Study on Trimaran Cross-Deck Structure’s Fatigue Characteristics Based on the Spectral Fatigue Method
Authors: Zhen Chunbo , Feng Guoqing , Wang Tianlin , Yu Pengyao
Published: March 2019

Spectral fatigue analysis is performed on the trimaran cross-deck structural detail. A global finite element (FE) model with local fine meshes at hot spot locations is built for the calculation of structural response. Three-dimensional linear potential flow theory and global FE analysis are used for wave load and stress transfer function calculations. Then, the hot spots’ fatigue damage is calculated, considering various factors influencing spectral analysis, which includes cycle counting correction factors, wave scatter diagram, and the distribution coefficient of wave headings. A full-scale model fatigue test is used to investigate the fatigue behavior of the cross-deck structural detail. Using the fatigue test data, the S - N curve characteristic of the cross-deck structural detail is produced. Finally, the trimaran cross-deck structural detail’s fatigue characteristics are summarized and the effects of the factors influencing spectral fatigue analysis are reported.
Linear and Nonlinear Viscoelastic Modulus of Rubber
Authors: Tolpekina T. V. , Pyckhout-Hintzen W. , Persson B.N.J.
Published: March 2019

We study the linear and nonlinear viscoelastic properties of two tire tread compounds. We discuss the difference in nonlinear response between the oscillatory tensile and shear modes. We also analyze strain relaxation (creep) data for the same systems. We discuss what type of measurements are most suitable for obtaining the viscoelastic modulus used in rubber friction calculations.
Phase Transition and Metallization of Orpiment by Raman Spectroscopy, Electrical Conductivity and Theoretical Calculation under High Pressure
Authors: Liu Kaixiang , Dai Lidong , Li Heping , Hu Haiying , Yang Linfei , Pu Chang , Hong Meiling , Liu Pengfei
Published: March 2019

The structural, vibrational, and electronic characteristics in orpiment were performed in the diamond anvil cell (DAC), combined with a series of experimental and theoretical research, including Raman spectroscopy, impedance spectroscopy, atomic force microscopy (AFM), high-resolution transmission electron microscopy (HRTEM), and first-principles theoretical calculations. The isostructural phase transition at ~25.0 GPa was manifested as noticeable changes in the compressibility, bond lengths, and slope of the conductivity, as well as in a continuous change in the pressure dependence of the unit cell volume. Furthermore, a pressure-induced metallization occurred at ~42.0 GPa, accompanied by reversible electrical conductivity. We also determined the metallicity of orpiment at 45.0 GPa by first-principles theoretical calculations, and the results were in good agreement with the results of the temperature-dependent conductivity measurements. The HRTEM and AFM images of the recovered sample confirmed that orpiment remains in the crystalline phase with an intact layered structure and available crystal-shaped clusters. These high-pressure behaviors of orpiment present some crucial information on the structural phase transition, metallization, amorphization and superconductivity for the A2B3-type of engineering materials at high pressure.
Amphiphobic Nanostructured Coatings for Industrial Applications
Authors: Veronesi Federico , Boveri Giulio , Raimondo Mariarosa
Published: March 2019

The search for surfaces with non-wetting behavior towards water and low-surface tension liquids affects a wide range of industries. Surface wetting is regulated by morphological and chemical features interacting with liquid phases under different ambient conditions. Most of the approaches to the fabrication of liquid-repellent surfaces are inspired by living organisms and require the fabrication of hierarchically organized structures, coupled with low surface energy chemical composition. This paper deals with the design of amphiphobic metals (AM) and alloys by deposition of nano-oxides suspensions in alcoholic or aqueous media, coupled with perfluorinated compounds and optional infused lubricant liquids resulting in, respectively, solid–liquid–air and solid–liquid–liquid working interfaces. Nanostructured organic/inorganic hybrid coatings with contact angles against water above 170°, contact angle with n-hexadecane (surface tension γ = 27 mN/m at 20 °C) in the 140–150° range and contact angle hysteresis lower than 5° have been produced. A full characterization of surface chemistry has been undertaken by X-ray photoelectron spectroscopy (XPS) analyses, while field-emission scanning electron microscope (FE-SEM) observations allowed the estimation of coatings thicknesses (300–400 nm) and their morphological features. The durability of fabricated amphiphobic surfaces was also assessed with a wide range of tests that showed their remarkable resistance to chemically aggressive environments, mechanical stresses and ultraviolet (UV) radiation. Moreover, this work analyzes the behavior of amphiphobic surfaces in terms of anti-soiling, snow-repellent and friction-reduction properties—all originated from their non-wetting behavior. The achieved results make AM materials viable solutions to be applied in different sectors answering several and pressing technical needs.
10-MDP Based Dental Adhesives: Adhesive Interface Characterization and Adhesive Stability—A Systematic Review
Authors: Carrilho Eunice , Cardoso Miguel , Marques Ferreira Manuel , Marto Carlos Miguel , Paula Anabela , Coelho Ana Sofia
Published: March 2019

The incorporation of functional monomers in dental adhesive systems promotes chemical interaction with dental substrates, resulting in higher adhesion forces when compared to micromechanical adhesion only. The 10-MDP monomer, whose chemical structure allows for a polar behavior which is favorable to adhesion, also promotes the protection of collagen fibers through the formation of MDP-calcium salts. This systematic review aimed to characterize the interface created by 10-MDP containing adhesive systems through an evaluation of the following parameters: Formation of nano-layered structures, capacity to produce an acid-base resistant zone, and adhesion stability. The research was conducted using PubMed, Cochrane Library, Web of Science and Embase, limited to English, Spanish, and Portuguese articles. The research was done according to the PICO strategy. The 10-MDP monomer has the capacity to produce an acid-base resistant zone on the adhesive interface, which increases the response to acid-base challenges. The adhesion established by these systems is stable over time. To have the best of these adhesive solutions, a scrubbing technique must be used to apply the adhesive system on dental substrates, in order to improve monomers infiltration and to create a stable bond. Time must be given for the solution to infiltrate, hybridize and form the MDP-Ca, improving adhesive stability.
Study on the Effect of Graphene Oxide with Low Oxygen Content on Portland Cement Based Composites
Authors: Kudžma Andrius , Škamat Jelena , Stonys Rimvydas , Krasnikovs Andrejs , Kuznetsov Denis , Girskas Giedrius , Antonovič Valentin
Published: March 2019

The current study presents research into the effect of graphene oxide (GO) with a carbon to oxygen ratio of 4:1 on the fluidity, hydration, microstructure, mechanical and physical properties of Portland cement pastes and mortars. The amounts of GO investigated were 0.02%, 0.04%, and 0.06% by weight of cement, while for mortars, an extra composition with 0.1% was also prepared. According to the results, the fluidity of cement paste and mortar increased and the hydration process was slightly retarded with the addition of GO. Despite this, improvements in compressive and flexural strength were established in the mortars containing GO. The maximum effects (~22% and ~6%, respectively) were obtained with the addition of 0.06% GO. The calculation of estimated strength proportional to samples of equal density showed that for mortars cured for 7 days the gain in strength was directly related to the gain in density. For mortar samples cured for 28 days, the estimated strength was found to be significantly higher than that of the reference sample, indicating that besides density there are other factors determining the improvement in strength of mortars modified with GO. The possible structure strengthening mechanisms are discussed.
Easy, Quick, and Reproducible Sonochemical Synthesis of CuO Nanoparticles
Authors: Silva Nataly , Ramírez Sara , Díaz Isaac , Garcia Andreina , Hassan Natalia
Published: March 2019

Copper oxide nanoparticles (CuO NPs) were synthesized in air by reducing copper (II) sulfate pentahydrate salt (CuSO4·5H2O) in the presence of sodium borohydride. The reaction was stabilized with Hexadecyltrimethylammonium bromide (CTAB) in a basic medium and using ultrasound waves. Different molar ratios of CTAB:Cu2+ and NaBH4:Cu2+ were explored, to optimize the synthesis conditions, and to study the stability, size, and Zeta potential of the colloidal suspension. Optimum conditions to generate spherical, stable, and monodispersed nanoparticles with hydrodynamic diameters of 36 ± 1.3 nm were obtained, using 16 mM CTAB and 2 M NaBH4 (molar ratios Cu2+:CTAB:NaBH4 of 1:6:10). X-ray diffraction (XRD) was implemented, and a monoclinic CuO crystal system was formed. This demonstrated a monoclinic crystal system corresponding to CuO. The diffraction peaks were identified and confirmed according to their selected area electron diffraction (SAED) patterns.
Synthesis of NiO Nanotubes via a Dynamic Thermal Oxidation Process
Authors: Xiang Wenfeng , Dong Zibin , Luo Yi , Zhao Jiali , Wang Jia-ou , Ibrahim Kurash , Zhan Haihong , Yue Wenzheng , Guo Haizhong
Published: March 2019

Nickel oxide (NiO) nanotubes were synthesized via a thermal oxidation process from Ni nanowires. The effects of oxidation temperature on the morphology, microstructures, and composition of nanowires were investigated using scanning electron microscopy, X-ray diffraction, and X-ray photoelectron spectroscopy. The results show that the Ni nanowires convert initially to Ni/NiO core-shell nanowires with increasing annealing temperatures, and then to the nanotubes at the critical transition temperature of about 425 °C. Our findings provide useful information for the preparation of NiO nanotubes to meet the required applications.
Analytical Modeling of In-Process Temperature in Powder Bed Additive Manufacturing Considering Laser Power Absorption, Latent Heat, Scanning Strategy, and Powder Packing
Authors: Ning Jinqiang , Sievers Daniel E. , Garmestani Hamid , Liang Steven Y.
Published: March 2019

Temperature distribution gradient in metal powder bed additive manufacturing (MPBAM) directly controls the mechanical properties and dimensional accuracy of the build part. Experimental approach and numerical modeling approach for temperature in MPBAM are limited by the restricted accessibility and high computational cost, respectively. Analytical models were reported with high computational efficiency, but the developed models employed a moving coordinate and semi-infinite medium assumption, which neglected the part dimensions, and thus reduced their usefulness in real applications. This paper investigates the in-process temperature in MPBAM through analytical modeling using a stationary coordinate with an origin at the part boundary (absolute coordinate). Analytical solutions are developed for temperature prediction of single-track scan and multi-track scans considering scanning strategy. Inconel 625 is chosen to test the proposed model. Laser power absorption is inversely identified with the prediction of molten pool dimensions. Latent heat is considered using the heat integration method. The molten pool evolution is investigated with respect to scanning time. The stabilized temperatures in the single-track scan and bidirectional scans are predicted under various process conditions. Close agreements are observed upon validation to the experimental values in the literature. Furthermore, a positive relationship between molten pool dimensions and powder packing porosity was observed through sensitivity analysis. With benefits of the absolute coordinate, and high computational efficiency, the presented model can predict the temperature for a dimensional part during MPBAM, which can be used to further investigate residual stress and distortion in real applications.
Advances in Selective Laser Melting of Nitinol Shape Memory Alloy Part Production
Authors: Chekotu Josiah Cherian , Groarke Robert , O’Toole Kevin , Brabazon Dermot
Published: March 2019

Nitinol (nickel-titanium or Ni-Ti) is the most utilized shape memory alloy due to its good superelasticity, shape memory effect, low stiffness, damping, biocompatibility, and corrosion resistance. Various material characteristics, such as sensitivity to composition and production thermal gradients, make conventional methods ineffective for the manufacture of high quality complex Nitinol components. These issues can be resolved by modern additive manufacturing (AM) methods which can produce net or near-net shape parts with highly precise and complex Nitinol structures. Compared to Laser Engineered Net Shape (LENS), Selective Laser Melting (SLM) has the benefit of more easily creating a high quality local inert atmosphere which protects chemically-reactive Nitinol powders to a higher degree. In this paper, the most recent publications related to the SLM processing of Nitinol are reviewed to identify the various influential factors involved and process-related issues. It is reported how powder quality and material composition have a significant effect on the produced microstructures and phase transformations. The effect of heat treatments after SLM fabrication on the functional and mechanical properties are noted. Optimization of several operating parameters were found to be critical in fabricating Nitinol parts of high density. The importance of processing parameters and related thermal cooling gradient which are crucial for obtaining the correct phase structure for shape memory capabilities are also presented. The paper concludes by presenting the significant findings and areas of prospective future research in relation to the SLM processing of Nitinol.
Adaptive Spiral Tool Path Generation for Diamond Turning of Large Aperture Freeform Optics
Authors: Wang Dongfang , Sui Yongxin , Yang Huaijiang , Li Duo
Published: March 2019

Slow tool servo (STS) diamond turning is a well-developed technique for freeform optics machining. Due to low machining efficiency, fluctuations in side-feeding motion and redundant control points for large aperture optics, this paper reports a novel adaptive tool path generation (ATPG) for STS diamond turning. In ATPG, the sampling intervals both in feeding and cutting direction are independently controlled according to interpolation error and cutting residual tolerance. A smooth curve is approximated to the side-feeding motion for reducing the fluctuations in feeding direction. Comparison of surface generation of typical freeform surfaces with ATPG and commercial software DiffSys is conducted both theoretically and experimentally. The result demonstrates that the ATPG can effectively reduce the volume of control points, decrease the vibration of side-feeding motion and improve machining efficiency while surface quality is well maintained for large aperture freeform optics.
Effective Medium Method for Chloride Diffusion Coefficient of Mature Fly Ash Cement Paste
Authors: Zhou Hong , Zhou Xin-Zhu , Zhang Jian , Zheng Jian-Jun
Published: March 2019

The chloride diffusion coefficient of concrete plays an essential role in the durability assessment and design of concrete structures built in chloride-laden environments. The purpose of this paper is to present an effective medium method (EMM) for evaluating the chloride diffusion coefficient of mature fly ash cement paste. In this method, a numerical method is used to estimate the degrees of hydration of cement and fly ash. Fly ash cement paste is then modeled as a two-phase composite material, composed of a solid phase and a pore space. By introducing the percolation theory, the EMM is modified to derive the chloride diffusion coefficient of fly ash cement paste in an analytical manner. To verify the EMM, a chloride diffusion test of fly ash cement paste at a curing age of up to 540 days is conducted. It is shown that, within a reasonable fly ash content, a larger fly ash content and/or curing age results in a smaller chloride diffusion coefficient. The chloride diffusion coefficient decreases with a decreasing water/binder ratio. Finally, the validity of the EMM is verified with experimental results.
rDEER: A Modified DEER Sequence for Distance Measurements Using Shaped Pulses
Authors: Bahrenberg Thorsten , Yang Yin , Goldfarb Daniella , Feintuch Akiva
Published: March 2019

The DEER (double electron-electron resonance, also called PELDOR) experiment, which probes the dipolar interaction between two spins and thus reveals distance information, is an important tool for structural studies. In recent years, shaped pump pulses have become a valuable addition to the DEER experiment. Shaped pulses offer an increased excitation bandwidth and the possibility to precisely adjust pulse parameters, which is beneficial especially for demanding biological samples. We have noticed that on our home built W-band spectrometer, the dead-time free 4-pulse DEER sequence with chirped pump pulses suffers from distortions at the end of the DEER trace. Although minor, these are crucial for Gd(III)-Gd(III) DEER where the modulation depth is on the order of a few percent. Here we present a modified DEER sequence—referred to as reversed DEER (rDEER)—that circumvents the coherence pathway which gives rise to the distortion. We compare the rDEER (with two chirped pump pulses) performance values to regular 4-pulse DEER with one monochromatic as well as two chirped pulses and investigate the source of the distortion. We demonstrate the applicability and effectivity of rDEER on three systems, ubiquitin labeled with Gd(III)-DOTA-maleimide (DOTA, 1,4,7,10-Tetraazacyclododecane-1,4,7,10-tetraacetic acid) or with Gd(III)-DO3A (DO3A, 1,4,7,10-Tetraazacyclododecane-1,4,7-triyl) triacetic acid) and the multidrug transporter MdfA, labeled with a Gd(III)-C2 tag, and report an increase in the signal-to-noise ratio in the range of 3 to 7 when comparing the rDEER with two chirped pump pulses to standard 4-pulse DEER.
Simple Sufficient Subordination Conditions for Close-to-Convexity
Authors: Analouei Adegani Ebrahim , Bulboacă Teodor , Motamednezhad Ahmad
Published: March 2019

Using several applications of the theory of differential subordination we obtain sufficient conditions for usually normalized analytic functions to belong to certain subclasses of close-to-convex functions and close-to-convex functions of order α .
AHP-Group Decision Making Based on Consistency
Authors: Aguarón Juan , Escobar María Teresa , Moreno-Jiménez José María , Turón Alberto
Published: March 2019

The Precise consistency consensus matrix (PCCM) is a consensus matrix for AHP-group decision making in which the value of each entry belongs, simultaneously, to all the individual consistency stability intervals. This new consensus matrix has shown significantly better behaviour with regards to consistency than other group consensus matrices, but it is slightly worse in terms of compatibility, understood as the discrepancy between the individual positions and the collective position that synthesises them. This paper includes an iterative algorithm for improving the compatibility of the PCCM. The sequence followed to modify the judgments of the PCCM is given by the entries that most contribute to the overall compatibility of the group. The procedure is illustrated by means of its application to a real-life situation (a local context) with three decision makers and four alternatives. The paper also offers, for the first time in the scientific literature, a detailed explanation of the process followed to solve the optimisation problem proposed for the consideration of different weights for the decision makers in the calculation of the PCCM.
A Mathematical Model and Numerical Solution of a Boundary Value Problem for a Multi-Structure Plate
Authors: Yazıcı Vildan , Muradoğlu Zahir
Published: March 2019

This study examined the deformation problem of a plate system (formed side-by-side) composed of multi-structure plates. It obtained numerical approaches of the transmission conditions on the common border of plates that composed the system. Numerical examples were solved in different boundary and transmission conditions.
A New Sesquiterpenoid Aminoquinone from an Indonesian Marine Sponge
Authors: Balansa Walter , Mettal Ute , Wuisan Zerlina G. , Plubrukarn Anuchit , Ijong Frans G. , Liu Yang , Schäberle Till F.
Published: March 2019

Sponges are a well-known bioresource for bioactive compounds. In this study, antibacterial activity-guided fractionation of the extract from an Indonesian marine Dactylospongia elegans sponge led to the discovery of four merosesquiterpenoids, namely, a new sesquiterpenoid aminoquinone nakijiquinone V (1), along with illimaquinone (2), smenospongine (3), and dyctioceratine C (4). The structure of compound 1 was elucidated by 1D and 2D NMR as well as by LC-HRESIMS data analysis. Compounds 2–4 showed moderate to low antimicrobial activity against Bacillus megaterium DSM32 with a minimum inhibitory concentration (MIC) of 32 μg/mL, 32 μg/mL, and 64 μg/mL, respectively. Furthermore, compounds 2 and 3 both inhibited Micrococcus luteus ATCC 4698 with a MIC of 32 μg/mL. In conclusion, the isolated merosesquiterpenoids, which are known for their cytotoxic effects, showed antibacterial activity and prompt future structure activity relationship (SAR) studies concerning the various bioactivities observed for this group of natural products.
A Synthetic Derivative of Antimicrobial Peptide Holothuroidin 2 from Mediterranean Sea Cucumber (Holothuria tubulosa) in the Control of Listeria monocytogenes
Authors: Cusimano Maria Grazia , Spinello Angelo , Barone Giampaolo , Schillaci Domenico , Cascioferro Stella , Magistrato Alessandra , Parrino Barbara , Arizza Vincenzo , Vitale Maria
Published: March 2019

Due to the limited number of available antibiotics, antimicrobial peptides (AMPs) are considered antimicrobial candidates to fight difficult-to-treat infections such as those associated with biofilms. Marine environments are precious sources of AMPs, as shown by the recent discovery of antibiofilm properties of Holothuroidin 2 (H2), an AMP produced by the Mediterranean sea cucumber Holothuria tubulosa. In this study, we considered the properties of a new H2 derivative, named H2d, and we tested it against seven strains of the dangerous foodborne pathogen Listeria monocytogenes. This peptide was more active than H2 in inhibiting the growth of planktonic L. monocytogenes and was able to interfere with biofilm formation at sub-minimum inhibitory concentrations (MICs). Atomic-level molecular dynamics (MD) simulations revealed insights related to the enhanced inhibitory activity of H2d, showing that the peptide is characterized by a more defined tertiary structure with respect to its ancestor. This allows the peptide to better exhibit an amphipathic character, which is an essential requirement for the interaction with cell membranes, similarly to other AMPs. Altogether, these results support the potential use of our synthetic peptide, H2d, as a template for the development of novel AMP-based drugs able to fight foodborne that are resistant to conventional antibiotics.
Complex Relationships between the Blue Pigment Marennine and Marine Bacteria of the Genus Vibrio
Authors: Falaise Charlotte , James Adèle , Travers Marie-Agnès , Zanella Marie , Badawi Myriam , Mouget Jean-Luc
Published: March 2019

Marennine, the water-soluble blue pigment produced by the marine diatom Haslea ostrearia, is known to display antibacterial activities. Previous studies have demonstrated a prophylactic effect of marennine on bivalve larvae challenged with a pathogenic Vibrio splendidus, suggesting that the blue Haslea is a good candidate for applications in aquaculture as a source of a natural antimicrobial agent. Indeed, the genus Vibrio is ubiquitous in aquaculture ecosystems, and regular events of pathogenic invasion cause some of the biggest losses worldwide. To better characterize the effects of marennine on Vibrios, a panel of 30 Vibrio strains belonging to 10 different species was tested, including bivalve pathogenic species (e.g., Vibrio crassostreae and Vibrio harveyi). Vibrio strains were first exposed to 10 and 25 µg mL−1 of Blue Water (BW), a concentrated culture supernatant of H. ostrearia containing marennine. This screening evidenced a great diversity in responses, from growth stimulation to a total inhibition, at both the interspecific or intraspecific level. In a second series of experiments, 10 Vibrio strains were exposed to BW at concentrations ranging from 5 to 80 µg mL−1. The highest concentrations of BW did not systematically result in the highest growth inhibition as hormetic responses—opposite effects regarding the concentration—were occasionally evidenced. The relationships between marennine and Vibrio strains appear more complex than expected and justify further study—in particular, on the mechanisms of action—before considering applications as a natural prophylactic or antibiotic agent in aquaculture.
Product and Process Fingerprint for Nanosecond Pulsed Laser Ablated Superhydrophobic Surface
Authors: Cai Yukui , Luo Xichun , Liu Zhanqiang , Qin Yi , Chang Wenlong , Sun Yazhou
Published: March 2019

Superhydrophobic surfaces have attracted extensive attention over the last few decades. It is mainly due to their capabilities of providing several interesting functions, such as self-cleaning, corrosion resistance, anti-icing and drag reduction. Nanosecond pulsed laser ablation is considered as a promising technique to fabricate superhydrophobic structures. Many pieces of research have proved that machined surface morphology has a significant effect on the hydrophobicity of a specimen. However, few quantitative investigations were conducted to identify effective process parameters and surface characterization parameters for laser-ablated microstructures which are sensitive to the hydrophobicity of the microstructured surface. This paper proposed and reveals for the first time, the concepts of process and product fingerprints for laser ablated superhydrophobic surface through experimental investigation and statistical analysis. The results of correlation analysis showed that a newly proposed dimensionless functional parameter in this paper, Rhy, i.e., the average ratio of Rz to Rsm is the most sensitive surface characterization parameter to the water contact angle of the specimen, which can be regarded as the product fingerprint. It also proposes another new process parameter, average laser pulse energy per unit area of the specimen (Is), as the best process fingerprint which can be used to control the product fingerprint Rhy. The threshold value of Rhy and Is are 0.41 and 536 J/mm2 respectively, which help to ensure the superhydrophobicity (contact angle larger than 150°) of the specimen in the laser ablation process. Therefore, the process and product fingerprints overcome the research challenge of the so-called inverse problem in manufacturing as they can be used to determine the required process parameters and surface topography according to the specification of superhydrophobicity.
Biofilm Specific Activity: A Measure to Quantify Microbial Biofilm
Authors: Corte Laura , Casagrande Pierantoni Debora , Tascini Carlo , Roscini Luca , Cardinali Gianluigi
Published: March 2019

Microbes growing onto solid surfaces form complex 3-D biofilm structures characterized by the production of extracellular polymeric compounds and an increased resistance to drugs. The quantification of biofilm relays currently on a number of different approaches and techniques, often leading to different evaluations of the ability to form biofilms of the studied microbial strains. Measures of biofilm biomass were carried out with crystal violet (CV) and a direct reading at 405 nm, whereas the activity was assessed with the XTT ((2,3-bis-(2-methoxy-4-nitro-5-sulfophenyl)-2H-tetrazolium-5-carboxanilide) method. The strains of four pathogenic species of the genus Candida (C. albicans, C. glabrata, C. parapsilosis and C. tropicalis) and of Staphylococcus aureus were employed to determine the effective relatedness among techniques and the specific activity of the biofilm, as a ratio between the XTT and the CV outcomes. Since the ability to form biomass and to be metabolically active are not highly related, their simultaneous use allowed for a categorization of the strains. This classification is putatively amenable of further study by comparing the biofilm type and the medical behavior of the strains.
Response Surface Methodology Optimization of an Acidic Protease Produced by Penicillium bilaiae Isolate TDPEF30, a Newly Recovered Endophytic Fungus from Healthy Roots of Date Palm Trees (Phoenix dactylifera L.)
Authors: Ben Mefteh Fedia , Frikha Fakher , Daoud Amal , Chenari Bouket Ali , Luptakova Lenka , Alenezi Faizah N. , Al-Anzi Bader S. , Oszako Tomasz , Gharsallah Neji , Belbahri Lassaad
Published: March 2019

To explore proteolytic activity of endophytic fungi inhabiting date palm roots, a Penicillium bilaiae isolate, displaying the highest level of protease production, has been recovered. Response surface methodology (RSM) was applied to optimize culture conditions for protease production by the fungus. Plackett-Burman design allowed for screening of variables effective in protease production. Results indicated that temperature, initial pH and glucose concentration dramatically affect protease yield. These factors were further optimized using a Box-Behnken design and RSM. A combination of initial pH (6.26), temperature (24.5 °C), glucose (13.75 g/L), NaNO3 (1.5 g/L), MgSO4 (0.2 g/L), KH2PO4 (0.5 g/L) and KCl (0.5 g/L) were optimum for maximum production of protease. A 1086-fold enhancement of protease production was gained after optimization. Biochemical properties of fungal protease including the effect of pH and temperature on the activity and the stability of proteolytic enzyme were determined. Moreover, the influence of carbon and nitrogen sources, metal ions, detergents as well as enzyme inhibitors was investigated. Our results highlighted that protease of Penicillium bilaiae isolate TDPEF30 could be considered as a promising candidate for industrial applications.
Cross-Species Analysis of Glycosaminoglycan Binding Proteins Reveals Some Animal Models Are “More Equal” than Others
Authors: Boittier Eric D. , Gandhi Neha S. , Ferro Vito , Coombe Deirdre R.
Published: March 2019

Glycosaminoglycan (GAG) mimetics are synthetic or semi-synthetic analogues of heparin or heparan sulfate, which are designed to interact with GAG binding sites on proteins. The preclinical stages of drug development rely on efficacy and toxicity assessment in animals and aim to apply these findings to clinical studies. However, such data may not always reflect the human situation possibly because the GAG binding site on the protein ligand in animals and humans could differ. Possible inter-species differences in the GAG-binding sites on antithrombin III, heparanase, and chemokines of the CCL and CXCL families were examined by sequence alignments, molecular modelling and assessment of surface electrostatic potentials to determine if one species of laboratory animal is likely to result in more clinically relevant data than another. For each protein, current understanding of GAG binding is reviewed from a protein structure and function perspective. This combinatorial analysis shows chemokine dimers and oligomers can present different GAG binding surfaces for the same target protein, whereas a cleft-like GAG binding site will differently influence the types of GAG structures that bind and the species preferable for preclinical work. Such analyses will allow an informed choice of animal(s) for preclinical studies of GAG mimetic drugs.
Speciation Analysis of Trace Arsenic, Mercury, Selenium and Antimony in Environmental and Biological Samples Based on Hyphenated Techniques
Authors: Yu Xiaoping , Liu Chenglong , Guo Yafei , Deng Tianlong
Published: March 2019

In order to obtain a well understanding of the toxicity and ecological effects of trace elements in the environment, it is necessary to determine not only the total amount, but also their existing species. Speciation analysis has become increasingly important in making risk assessments of toxic elements since the toxicity and bioavailability strongly depend on their chemical forms. Effective separation of different species in combination with highly sensitive detectors to quantify these particular species is indispensable to meet this requirement. In this paper, we present the recent progresses on the speciation analysis of trace arsenic, mercury, selenium and antimony in environmental and biological samples with an emphasis on the separation and detection techniques, especially the recent applications of high performance liquid chromatography (HPLC) hyphenated to atomic spectrometry or mass spectrometry.