bluuebunny/crossref_metadata_2025 huggingface dataset:
Role of the Built and Online Social Environments on Expression of Dining on Instagram
Authors: Mhasawade Vishwali , Elghafari Anas , Duncan Dustin T. , Chunara Rumi
Published: January 2020

Online social communities are becoming windows for learning more about the health of populations, through information about our health-related behaviors and outcomes from daily life. At the same time, just as public health data and theory has shown that aspects of the built environment can affect our health-related behaviors and outcomes, it is also possible that online social environments (e.g., posts and other attributes of our online social networks) can also shape facets of our life. Given the important role of the online environment in public health research and implications, factors which contribute to the generation of such data must be well understood. Here we study the role of the built and online social environments in the expression of dining on Instagram in Abu Dhabi; a ubiquitous social media platform, city with a vibrant dining culture, and a topic (food posts) which has been studied in relation to public health outcomes. Our study uses available data on user Instagram profiles and their Instagram networks, as well as the local food environment measured through the dining types (e.g., casual dining restaurants, food court restaurants, lounges etc.) by neighborhood. We find evidence that factors of the online social environment (profiles that post about dining versus profiles that do not post about dining) have different influences on the relationship between a user’s built environment and the social dining expression, with effects also varying by dining types in the environment and time of day. We examine the mechanism of the relationships via moderation and mediation analyses. Overall, this study provides evidence that the interplay of online and built environments depend on attributes of said environments and can also vary by time of day. We discuss implications of this synergy for precisely-targeting public health interventions, as well as on using online data for public health research.
Roles of Reconstituted High-Density Lipoprotein Nanoparticles in Cardiovascular Disease: A New Paradigm for Drug Discovery
Authors: Huang Jiansheng , Wang Dongdong , Huang Li-Hao , Huang Hui
Published: January 2020

Epidemiological results revealed that there is an inverse correlation between high-density lipoprotein (HDL) cholesterol levels and risks of atherosclerotic cardiovascular disease (ASCVD). Mounting evidence supports that HDLs are atheroprotective, therefore, many therapeutic approaches have been developed to increase HDL cholesterol (HDL-C) levels. Nevertheless, HDL-raising therapies, such as cholesteryl ester transfer protein (CETP) inhibitors, failed to ameliorate cardiovascular outcomes in clinical trials, thereby casting doubt on the treatment of cardiovascular disease (CVD) by increasing HDL-C levels. Therefore, HDL-targeted interventional studies were shifted to increasing the number of HDL particles capable of promoting ATP-binding cassette transporter A1 (ABCA1)-mediated cholesterol efflux. One such approach was the development of reconstituted HDL (rHDL) particles that promote ABCA1-mediated cholesterol efflux from lipid-enriched macrophages. Here, we explore the manipulation of rHDL nanoparticles as a strategy for the treatment of CVD. In addition, we discuss technological capabilities and the challenge of relating preclinical in vivo mice research to clinical studies. Finally, by drawing lessons from developing rHDL nanoparticles, we also incorporate the viabilities and advantages of the development of a molecular imaging probe with HDL nanoparticles when applied to ASCVD, as well as gaps in technology and knowledge required for putting the HDL-targeted therapeutics into full gear.
Computational Modeling of Claudin Structure and Function
Authors: Fuladi Shadi , Jannat Ridaka-Wal , Shen Le , Weber Christopher R. , Khalili-Araghi Fatemeh
Published: January 2020

Tight junctions form a barrier to control passive transport of ions and small molecules across epithelia and endothelia. In addition to forming a barrier, some of claudins control transport properties of tight junctions by forming charge- and size-selective ion channels. It has been suggested claudin monomers can form or incorporate into tight junction strands to form channels. Resolving the crystallographic structure of several claudins in recent years has provided an opportunity to examine structural basis of claudins in tight junctions. Computational and theoretical modeling relying on atomic description of the pore have contributed significantly to our understanding of claudin pores and paracellular transport. In this paper, we review recent computational and mathematical modeling of claudin barrier function. We focus on dynamic modeling of global epithelial barrier function as a function of claudin pores and molecular dynamics studies of claudins leading to a functional model of claudin channels.
Super-Resolution Imaging of Tight and Adherens Junctions: Challenges and Open Questions
Authors: Gonschior Hannes , Haucke Volker , Lehmann Martin
Published: January 2020

The tight junction (TJ) and the adherens junction (AJ) bridge the paracellular cleft of epithelial and endothelial cells. In addition to their role as protective barriers against bacteria and their toxins they maintain ion homeostasis, cell polarity, and mechano-sensing. Their functional loss leads to pathological changes such as tissue inflammation, ion imbalance, and cancer. To better understand the consequences of such malfunctions, the junctional nanoarchitecture is of great importance since it remains so far largely unresolved, mainly because of major difficulties in dynamically imaging these structures at sufficient resolution and with molecular precision. The rapid development of super-resolution imaging techniques ranging from structured illumination microscopy (SIM), stimulated emission depletion (STED) microscopy, and single molecule localization microscopy (SMLM) has now enabled molecular imaging of biological specimens from cells to tissues with nanometer resolution. Here we summarize these techniques and their application to the dissection of the nanoscale molecular architecture of TJs and AJs. We propose that super-resolution imaging together with advances in genome engineering and functional analyses approaches will create a leap in our understanding of the composition, assembly, and function of TJs and AJs at the nanoscale and, thereby, enable a mechanistic understanding of their dysfunction in disease.
Divergent Regulation of Myotube Formation and Gene Expression by E2 and EPA during In-Vitro Differentiation of C2C12 Myoblasts
Authors: Lacham-Kaplan Orly , Camera Donny M. , Hawley John A.
Published: January 2020

Estrogen (E2) and polyunsaturated fatty acids (n-3PUFA) supplements independently support general wellbeing and enhance muscle regeneration in-vivo and myotube formation in-vitro. However, the combined effect of E2 and n-3PUFA on myoblast differentiation is not known. The purpose of the study was to identify whether E2 and n-3PUFA possess a synergistic effect on in-vitro myogenesis. Mouse C2C12 myoblasts, a reliable model to reiterate myogenic events in-vitro, were treated with 10nM E2 and 50μM eicosapentaenoic acid (EPA) independently or combined, for 0–24 h or 0–120 h during differentiation. Immunofluorescence, targeted qPCR and next generation sequencing (NGS) were used to characterize morphological changes and differential expression of key genes involved in the regulation of myogenesis and muscle function pathways. E2 increased estrogen receptor α (Erα) and the expression of the mitogen-activated protein kinase 11 (Mapk11) within 1 h of treatment and improved myoblast differentiation and myotube formation. A significant reduction (p < 0.001) in myotube formation and in the expression of myogenic regulatory factors Mrfs (MyoD, Myog and Myh1) and the myoblast fusion related gene, Tmem8c, was observed in the presence of EPA and the combined E2/EPA treatment. Additionally, EPA treatment at 48 h of differentiation inhibited the majority of genes associated with the myogenic and striated muscle contraction pathways. In conclusion, EPA and E2 had no synergistic effect on myotube formation in-vitro. Independently, EPA inhibited myoblast differentiation and overrides the stimulatory effect of E2 when used in combination with E2.
Revisiting the Interaction of Melittin with Phospholipid Bilayers: The Effects of Concentration and Ionic Strength
Authors: Sabapathy Thiru , Deplazes Evelyne , Mancera Ricardo L.
Published: January 2020

Melittin is an anti-microbial peptide (AMP) and one of the most studied membrane-disrupting peptides. There is, however, a lack of accurate measurements of the concentration-dependent kinetics and affinity of binding of melittin to phospholipid membranes. In this study, we used surface plasmon resonance spectroscopy to determine the concentration-dependent effect on the binding of melittin to 1-palmitoyl-2-oleoyl-glycero-3-phosphocholine (POPC) bilayers in vesicles. Three concentration ranges were considered, and when combined, covered two orders of magnitudes (0.04 µM to 8 µM), corresponding to concentrations relevant to the membrane-disrupting and anti-microbial activities of melittin. Binding kinetics data were analysed using a 1:1 Langmuir-binding model and a two-state reaction model. Using in-depth quantitative analysis, we characterised the effect of peptide concentration, the addition of NaCl at physiological ionic strength and the choice of kinetic binding model on the reliability of the calculated kinetics and affinity of binding parameters. The apparent binding affinity of melittin for POPC bilayers was observed to decrease with increasing peptide/lipid (P/L) ratio, primarily due to the marked decrease in the association rate. At all concentration ranges, the two-state reaction model provided a better fit to the data and, thus, a more reliable estimate of binding affinity. Addition of NaCl significantly reduced the signal response during the association phase; however, no substantial effect on the binding affinity of melittin to the POPC bilayers was observed. These findings based on POPC bilayers could have important implications for our understanding of the mechanism of action of melittin on more complex model cell membranes of higher physiological relevance.
A Computational Approach for the Prediction of Treatment History and the Effectiveness or Failure of Antiretroviral Therapy
Authors: Tarasova Olga , Biziukova Nadezhda , Kireev Dmitry , Lagunin Alexey , Ivanov Sergey , Filimonov Dmitry , Poroikov Vladimir
Published: January 2020

Human Immunodeficiency Virus Type 1 (HIV-1) infection is associated with high mortality if no therapy is provided. Currently, the treatment of an HIV-1 positive patient requires that several drugs should be taken simultaneously. The resistance of the virus to an antiretroviral drug may lead to treatment failure. Our approach focuses on predicting the exposure of a particular viral variant to an antiretroviral drug or drug combination. It also aims at the prediction of drug treatment success or failure. We utilized nucleotide sequences of HIV-1 encoding protease and reverse transcriptase to perform such types of prediction. The PASS (Prediction of Activity Spectra for Substances) algorithm based on the naive Bayesian classifier was used to make a prediction. We calculated the probability of whether a sequence belonged (P1) or did not belong (P0) to the class associated with exposure of the viral sequence to the set of drugs that can be associated with resistance to the set of drugs. The accuracy calculated as the average Area Under the ROC (Receiver Operating Characteristic) Curve (AUC/ROC) for classifying exposure of the sequence to the HIV-1 protease inhibitors was 0.81 (±0.07), and for HIV-1 reverse transcriptase, it was 0.83 (±0.07). To predict cases of treatment effectiveness or failure, we used P1 and P0 values, obtained in PASS, along with the binary vector constructed based on short nucleotide descriptors and the applied random forest classifier. Average AUC/ROC prediction accuracy for the prediction of treatment effectiveness or failure for the combinations of HIV-1 protease inhibitors was 0.82 (±0.06) and of HIV-1 reverse transcriptase was 0.76 (±0.09).
The Autophagy Regulatory Molecule CSRP3 Interacts with LC3 and Protects Against Muscular Dystrophy
Authors: Cui Can , Han Shunshun , Tang Shuyue , He Haorong , Shen Xiaoxu , Zhao Jing , Chen Yuqi , Wei Yuanhang , Wang Yan , Zhu Qing , Li Diyan , Yin Huadong
Published: January 2020

CSRP3/MLP (cysteine-rich protein 3/muscle Lim protein), a member of the cysteine-rich protein family, is a muscle-specific LIM-only factor specifically expressed in skeletal muscle. CSRP3 is critical in maintaining the structure and function of normal muscle. To investigate the mechanism of disease in CSRP3 myopathy, we performed siRNA-mediated CSRP3 knockdown in chicken primary myoblasts. CSRP3 silencing resulted in the down-regulation of the expression of myogenic genes and the up-regulation of atrophy-related gene expressions. We found that CSRP3 interacted with LC3 protein to promote the formation of autophagosomes during autophagy. CSRP3-silencing impaired myoblast autophagy, as evidenced by inhibited autophagy-related ATG5 and ATG7 mRNA expression levels, and inhibited LC3II and Beclin-1 protein accumulation. In addition, impaired autophagy in CSRP3-silenced cells resulted in increased sensitivity to apoptosis cell death. CSRP3-silenced cells also showed increased caspase-3 and caspase-9 cleavage. Moreover, apoptosis induced by CSRP3 silencing was alleviated after autophagy activation. Together, these results indicate that CSRP3 promotes the correct formation of autophagosomes through its interaction with LC3 protein, which has an important role in skeletal muscle remodeling and maintenance.
Platelet Adhesion and Thrombus Formation in Microchannels: The Effect of Assay-Dependent Variables
Authors: Scavone Mariangela , Bozzi Silvia , Mencarini Tatiana , Podda Gianmarco , Cattaneo Marco , Redaelli Alberto
Published: January 2020

Microfluidic flow chambers (MFCs) allow the study of platelet adhesion and thrombus formation under flow, which may be influenced by several variables. We developed a new MFC, with which we tested the effects of different variables on the results of platelet deposition and thrombus formation on a collagen-coated surface. Methods: Whole blood was perfused in the MFC over collagen Type I for 4 min at different wall shear rates (WSR) and different concentrations of collagen-coating solutions, keeping blood samples at room temperature or 37 °C before starting the experiments. In addition, we tested the effects of the antiplatelet agent acetylsalicylic acid (ASA) (antagonist of cyclooxygenase-1, 100 µM) and cangrelor (antagonist of P2Y12, 1 µM). Results: Platelet deposition on collagen (I) was not affected by the storage temperature of the blood before perfusion (room temperature vs. 37 °C); (II) was dependent on a shear rate in the range between 300/s and 1700/s; and (III) was influenced by the collagen concentration used to coat the microchannels up to a value of 10 µg/mL. ASA and cangrelor did not cause statistically significant inhibition of platelet accumulation, except for ASA at low collagen concentrations. Conclusions: Platelet deposition on collagen-coated surfaces is a shear-dependent process, not influenced by the collagen concentration beyond a value of 10 µg/mL. However, the inhibitory effect of antiplatelet drugs is better observed using low concentrations of collagen.
Immunologic and Non-Immunologic Mechanisms Leading to Airway Remodeling in Asthma
Authors: Fang Lei , Sun Qinzhu , Roth Michael
Published: January 2020

Asthma increases worldwide without any definite reason and patient numbers double every 10 years. Drugs used for asthma therapy relax the muscles and reduce inflammation, but none of them inhibited airway wall remodeling in clinical studies. Airway wall remodeling can either be induced through pro-inflammatory cytokines released by immune cells, or direct binding of IgE to smooth muscle cells, or non-immunological stimuli. Increasing evidence suggests that airway wall remodeling is initiated early in life by epigenetic events that lead to cell type specific pathologies, and modulate the interaction between epithelial and sub-epithelial cells. Animal models are only available for remodeling in allergic asthma, but none for non-allergic asthma. In human asthma, the mechanisms leading to airway wall remodeling are not well understood. In order to improve the understanding of this asthma pathology, the definition of “remodeling” needs to be better specified as it summarizes a wide range of tissue structural changes. Second, it needs to be assessed if specific remodeling patterns occur in specific asthma pheno- or endo-types. Third, the interaction of the immune cells with tissue forming cells needs to be assessed in both directions; e.g., do immune cells always stimulate tissue cells or are inflamed tissue cells calling immune cells to the rescue? This review aims to provide an overview on immunologic and non-immunologic mechanisms controlling airway wall remodeling in asthma.
Sonic Hedgehog Signaling in Organogenesis, Tumors, and Tumor Microenvironments
Authors: Jeng Kuo-Shyang , Chang Chiung-Fang , Lin Shu-Sheng
Published: January 2020

During mammalian embryonic development, primary cilia transduce and regulate several signaling pathways. Among the various pathways, Sonic hedgehog (SHH) is one of the most significant. SHH signaling remains quiescent in adult mammalian tissues. However, in multiple adult tissues, it becomes active during differentiation, proliferation, and maintenance. Moreover, aberrant activation of SHH signaling occurs in cancers of the skin, brain, liver, gallbladder, pancreas, stomach, colon, breast, lung, prostate, and hematological malignancies. Recent studies have shown that the tumor microenvironment or stroma could affect tumor development and metastasis. One hypothesis has been proposed, claiming that the pancreatic epithelia secretes SHH that is essential in establishing and regulating the pancreatic tumor microenvironment in promoting cancer progression. The SHH signaling pathway is also activated in the cancer stem cells (CSC) of several neoplasms. The self-renewal of CSC is regulated by the SHH/Smoothened receptor (SMO)/Glioma-associated oncogene homolog I (GLI) signaling pathway. Combined use of SHH signaling inhibitors and chemotherapy/radiation therapy/immunotherapy is therefore key in targeting CSCs.
Chrysin Modulates Genes Related to Inflammation, Tissue Remodeling, and Cell Proliferation in the Gastric Ulcer Healing
Authors: Fagundes Felipe Leonardo , Piffer Graziele de Morais , Périco Larissa Lucena , Rodrigues Vinicius Peixoto , Hiruma-Lima Clélia Akiko , dos Santos Raquel de Cássia
Published: January 2020

Chrysin exhibits anti-inflammatory and antioxidant activities. Here, the gastroprotective effect of chrysin was investigated in mouse models of gastric ulcer induced by absolute ethanol, acetic acid, and ischemia-reperfusion injury. The gastric-healing effect was evaluated at 7 and 14 days after treatment; the mechanism of action was verified using the expression of metalloproteinase 2 (MMP-2) and 9 (MMP-9), caspase-3, cyclooxygenase 1 (COX-1) and 2 (COX-2), epidermal growth factor (EGF), and interleukin-10. Chrysin (10 mg/kg) inhibited macroscopic lesions and increased catalase activity in the mouse model established using absolute ethanol. It ameliorated the gastric ulcer caused by acetic acid by improving the expression of inflammatory genes such as COX-2, inhibiting negative remodeling promoted by MMP-9, increasing cell proliferation effect via EGF, and reducing cellular apoptosis by modulating caspase-3. A faster healing effect was evident in the first 7 days of treatment compared to 14 days of treatment, indicating the pharmacological potential of chrysin. Overall, these results demonstrate the potent effect of chrysin in the gastrointestinal tract and elucidate the genes involved in the healing of gastric ulcers. Moreover, an increase in the levels of gastric mucosa defensive factors is involved in the activity of chrysin in the gastric mucosa.
Subcellular Localization of the TFF Peptides xP1 and xP4 in the Xenopus laevis Gastric/Esophageal Mucosa: Different Secretion Modes Reflecting Diverse Protective Functions
Authors: Schwarz Heinz , Hoffmann Werner
Published: January 2020

The TFF peptides xP1 and xP4 from Xenopus laevis are orthologs of TFF1 and TFF2, respectively. xP1 is secreted as a monomer from gastric surface mucous cells and is generally not associated with mucins, whereas xP4 is a typical secretory peptide from esophageal goblet cells, and gastric mucous neck and antral gland cells tightly associated as a lectin with the ortholog of mucin MUC6. Both TFF peptides have diverse protective functions, xP1 as a scavenger for reactive oxygen species preventing oxidative damage and xP4 as a constituent of the water-insoluble adherent inner mucus barrier. Here, we present localization studies using immunofluorescence and immunoelectron microscopy. xP1 is concentrated in dense cores of secretory granules of surface mucous cells, whereas xP4 mixes with MUC6 in esophageal goblet cells. Of note, we observe two different types of goblet cells, which differ in their xP4 synthesis, and this is even visible morphologically at the electron microscopic level. xP4-negative granules are recognized by their halo, which is probably the result of shrinkage during the processing of samples for electron microscopy. Probably, the tight lectin binding of xP4 and MUC6 creates a crosslinked mucous network forming a stabile granule matrix, which prevents shrinkage.
The Online Vaccine Debate: Study of a Visual Analytics System
Authors: Ninkov Anton , Sedig Kamran
Published: January 2020

Online debates, specifically the ones about public health issues (e.g., vaccines, medications, and nutrition), occur frequently and intensely, and are having an impact on our world. Many public health topics are debated online, one of which is the efficacy and morality of vaccines. When people examine such online debates, they encounter numerous and conflicting sources of information. This information forms the basis upon which people take a position on such debates. This has profound implications for public health. It necessitates a need for public health stakeholders to be able to examine online debates quickly and effectively. They should be able to easily perform sense-making tasks on the vast amount of online information, such as sentiments, online presence, focus, or geographic locations. In this paper, we report the results of a user study of a visual analytic system (VAS), and whether and how this VAS can help with such sense-making tasks. Specifically, we report a usability evaluation of VINCENT (VIsual aNalytiCs systEm for investigating the online vacciNe debaTe), a VAS previously described. To help the reader, we briefly discuss VINCENT’s design in this paper as well. VINCENT integrates webometrics, natural language processing, data visualization, and human-data interaction. In the reported study, we gave users tasks requiring them to make sense of the online vaccine debate. Thirty-four participants were asked to perform these tasks by investigating data from 37 vaccine-focused websites. Half the participants were given access to the system, while the other half were not. Selected study participants from both groups were subsequently asked to be interviewed by the study administrator. Examples of questions and issues discussed with interviewees were: how they went about completing specific tasks, what they meant by some of the feedback they provided, and how they would have performed on the tasks if they had been placed in the other group. Overall, we found that VINCENT was a highly valuable resource for users, helping them make sense of the online vaccine debate much more effectively and faster than those without the system (e.g., users were able to compare websites similarities, identify emotional tone of websites, and locate websites with a specific focus). In this paper, we also identify a few issues that should be taken into consideration when developing VASes for online public health debates.
Microstructural Characteristics of Cement-Based Materials Fabricated Using Multi-Mode Fiber Laser
Authors: Seo Youngjin , Lee Dongkyoung , Pyo Sukhoon
Published: January 2020

Cement-based materials are the most prevalent construction materials, and the conventional cutting techniques are still mostly used for fabricating the materials. However, these conventional cutting methods could generate undesirable micro-cracks and remove unintentional structural sections. This experimental study aims to evaluate the effects of the new fabricating method using laser on the microstructural characteristics of the cement-based materials. The experimental variables are laser cutting speed, water to cement ratio and material compositions. In order to compare the microstructure before and after the laser interaction, the microstructure of the cut surface is observed through scanning electron microscopy/energy dispersive X-Ray (SEM/EDX). After the laser interaction, the Material Removed Zone (MRZ) and Heat Affected Zone (HAZ) are observed on the cut surface. In MRZ, it is found that the glassy layer is thickened by an increasing amount of silicate-based materials in cement-based materials. In addition, it concluded that the amount of silicate-based material mixed in the cement-based materials affects the laser cutting quality.
Research Progress on Applications of Polyaniline (PANI) for Electrochemical Energy Storage and Conversion
Authors: Li Zhihua , Gong Liangjun
Published: January 2020

Conducting polyaniline (PANI) with high conductivity, ease of synthesis, high flexibility, low cost, environmental friendliness and unique redox properties has been extensively applied in electrochemical energy storage and conversion technologies including supercapacitors, rechargeable batteries and fuel cells. Pure PANI exhibits inferior stability as supercapacitive electrode, and can not meet the ever-increasing demand for more stable molecular structure, higher power/energy density and more N-active sites. The combination of PANI and other active materials like carbon materials, metal compounds and other conducting polymers (CPs) can make up for these disadvantages as supercapacitive electrode. As for rechargeable batteries and fuel cells, recent research related to PANI mainly focus on PANI modified composite electrodes and supported composite electrocatalysts respectively. In various PANI based composite structures, PANI usually acts as a conductive layer and network, and the resultant PANI based composites with various unique structures have demonstrated superior electrochemical performance in supercapacitors, rechargeable batteries and fuel cells due to the synergistic effect. Additionally, PANI derived N-doped carbon materials also have been widely used as metal-free electrocatalysts for fuel cells, which is also involved in this review. In the end, we give a brief outline of future advances and research directions on PANI.
Performance Evaluation of Pavement Geomaterials Stabilized with Pond Ash and Brick Kiln Dust Using Advanced Cyclic Triaxial Testing
Authors: Gupta Gaurav , Sood Hemant , Gupta Pardeep
Published: January 2020

An increase in the generation of industrial waste materials such as pond ash and brick kiln dust represents a serious threat to the earth’s environment. The waste materials have novel characteristics and therefore their physical, chemical, mineralogical, morphological, mechanical, and toxicity characteristics were determined so that these materials can be incorporated as construction materials based on technical and environmental considerations. The purpose of this study is to utilize the wastes in the stabilization of clay geomaterial to outperform existing problems of inadequate strength and stiffness of the subgrade layer in flexible pavements. Mixtures of geomaterials, containing pond ash, brick kiln dust, and their combination were prepared and important engineering characteristics such as the plasticity, compaction, and strength of the mixtures were examined. The measurement of response to dynamic loading is a pre-condition for the accurate characterization of geomaterials used in pavement construction. Using advanced cyclic triaxial testing, this study evaluates the performance of pond ash and brick kiln dust in increasing the stiffness of the geomaterial under cyclic loading. To stimulate the worst field conditions, the stiffness and strength tests were performed under standard and four-day water-soaked conditions. The implementation of several stress-dependent models for the prediction of stiffness was examined. Pond ash and brick kiln dust were found to be effective in increasing the stiffness and strength of the geomaterial. The wastes were the most effectual when added in combination to the geomaterial. The characterization of the wastes was informative in understanding the governing mechanism prevalent in the waste stabilized mixtures. The toxicity characterization study revealed the non-toxic and non-hazardous nature of the waste materials, permitting their use in the construction of pavements. This study recommends the use of wastes in the subgrade of flexible pavements. Further research is needed for performance evaluation of the wastes on silt and sand geomaterials for their wider application.
Maximal Product of Graphs under Vague Environment
Authors: Sheikh Hoseini Behnaz , Akram Muhammad , Sheikh Hosseini Mehrnaz , Rashmanlou Hossein , Borzooei Rajab Ali
Published: January 2020

Graph models are found everywhere in natural and human made structures, including process dynamics in physical, biological and social systems. The product of graphs are appropriately used in several combinatorial applications and in the formation of different structural models. In this paper, we present a new product of graphs, namely, maximal product of two vague graphs. Then we describe certain concepts, including strongly, completely, regularity and connectedness on a maximal product of vague graphs. Further, we consider some results of edge regular and totally edge regular in a maximal product of vague graphs. Finally, we present an application for optimization of the biomass based on a maximal product of vague graphs.
Antibacterial Polyketides from Antarctica Sponge-Derived Fungus Penicillium sp. HDN151272
Authors: Shah Mudassir , Sun Chunxiao , Sun Zichao , Zhang Guojian , Che Qian , Gu Qianqun , Zhu Tianjiao , Li Dehai
Published: January 2020

Three new polyketides, ketidocillinones A–C (1–3), were discovered from the extract of an Antarctica sponge-derived fungus Penicillium sp. HDN151272. All the structures were deduced by spectroscopic data, including NMR and HRESIMS. The absolute configuration of compound 3 was established by using ECD calculation. Compounds 1−3 can be slowly oxidized to quinone form when exposed to air. Ketidocillinones B and C (2 and 3) exhibited potent antibacterial activity against Pseudomonas aeurigenosa, Mycobacterium phlei, and MRCNS (methicillin-resistant coagulase-negative staphylococci) with MIC values ranging from 1.56 to 25.00 µg/mL.
The Incorporation of Marine Coral Microparticles into Collagen-Based Scaffolds Promotes Osteogenesis of Human Mesenchymal Stromal Cells via Calcium Ion Signalling
Authors: Sheehy Eamon J. , Lemoine Mark , Clarke Declan , Gonzalez Vazquez Arlyng , O’Brien Fergal J.
Published: January 2020

Composite biomaterial scaffolds consisting of natural polymers and bioceramics may offer an alternative to autologous grafts for applications such as bone repair. Herein, we sought to investigate the possibility of incorporating marine coral microparticles into a collagen-based scaffold, a process which we hypothesised would enhance the mechanical properties of the scaffold as well its capacity to promote osteogenesis of human mesenchymal stromal cells. Cryomilling and sieving were utilised to achieve coral microparticles of mean diameters 14 µm and 64 µm which were separately incorporated into collagen-based slurries and freeze-dried to form porous scaffolds. X-ray diffraction and Fourier transform infrared spectroscopy determined the coral microparticles to be comprised of calcium carbonate whereas collagen/coral composite scaffolds were shown to have a crystalline calcium ethanoate structure. Crosslinked collagen/coral scaffolds demonstrated enhanced compressive properties when compared to collagen only scaffolds and also promoted more robust osteogenic differentiation of mesenchymal stromal cells, as indicated by increased expression of bone morphogenetic protein 2 at the gene level, and enhanced alkaline phosphatase activity and calcium accumulation at the protein level. Only subtle differences were observed when comparing the effect of coral microparticles of different sizes, with improved osteogenesis occurring as a result of calcium ion signalling delivered from collagen/coral composite scaffolds. These scaffolds, fabricated from entirely natural sources, therefore show promise as novel biomaterials for tissue engineering applications such as bone regeneration.
CD209 and Not CD28 or STAT6 Polymorphism Mediates Clinical Malaria and Parasitemia among Children from Nigeria
Authors: Morenikeji Olanrewaju B. , Metelski Jessica L. , Hawkes Megan E. , Capria Anna L. , Seamans Brooke N. , Falade Catherine O. , Ojurongbe Olusola , Thomas Bolaji N.
Published: January 2020

Malaria remains a significant disease, causing epic health problems and challenges all over the world, especially in sub-Saharan Africa. CD209 and CD28 genes act as co-stimulators and regulators of the immune system, while the STAT6 gene has been reported to mediate cytokine-induced responses. Single nucleotide polymorphisms of these genes might lead to differential disease susceptibility among populations at risk for malaria, due to alterations in the immune response. We aim to identify key drivers of the immune response to malaria infection among the three SNPs: CD209 (rs4804803), CD28 (rs35593994) and STAT6 (rs3024974). After approval and informed consent, we genotyped blood samples from a total of 531 children recruited from Nigeria using the Taqman SNP genotyping assay and performed comparative analysis of clinical covariates among malaria-infected children. Our results reveal the CD209 (rs4804803) polymorphism as a susceptibility factor for malaria infection, significantly increasing the risk of disease among children, but not CD28 (rs35593994) or STAT6 (rs3024974) polymorphisms. Specifically, individuals with the homozygous mutant allele (rs4804803G/G) for the CD209 gene have a significantly greater susceptibility to malaria, and presented with higher mean parasitemia. This observation may be due to a defective antigen presentation and priming, leading to an ineffective downstream adaptive immune response needed to combat infection, as well as the resultant higher parasitemia and disease manifestation. We conclude that the CD209 gene is a critical driver of the immune response during malaria infection, and can serve as a predictor of disease susceptibility or a biomarker for disease diagnosis.
Microbial Degradation of Different Hydrocarbon Fuels with Mycoremediation of Volatiles
Authors: Horel Agota , Schiewer Silke
Published: January 2020

Naturally occurring microorganisms in soil matrices play a significant role in overall hydrocarbon contaminant removal. Bacterial and fungal degradation processes are major contributors to aerobic remediation of surface contaminants. This study investigated degradation of conventional diesel, heating diesel fuel, synthetic diesel (Syntroleum), fish biodiesel and a 20% biodiesel/diesel blend by naturally present microbial communities in laboratory microcosms under favorable environmental conditions. Visible fungal remediation was observed with Syntroleum and fish biodiesel contaminated samples, which also showed the highest total hydrocarbon mineralization (>48%) during the first 28 days of the experiment. Heating diesel and conventional diesel fuels showed the lowest total hydrocarbon mineralization with 18–23% under favorable conditions. In concurrent experiments with growth of fungi suspended on a grid in the air space above a specific fuel with little or no soil, fungi were able to survive and grow solely on volatile hydrocarbon compounds as a carbon source. These setups involved negligible bacterial degradation for all five investigated fuel types. Fungal species able to grow on specific hydrocarbon substrates were identified as belonging to the genera of Giberella, Mortierella, Fusarium, Trichoderma, and Penicillium.
Impact of Chronic Obstructive Pulmonary Disease on Incidence, Microbiology and Outcome of Ventilator-Associated Lower Respiratory Tract Infections
Authors: Rouzé Anahita , Boddaert Pauline , Martin-Loeches Ignacio , Povoa Pedro , Rodriguez Alejandro , Ramdane Nassima , Salluh Jorge , Houard Marion , Nseir Saad
Published: January 2020

Objectives: To determine the impact of chronic obstructive pulmonary disease (COPD) on incidence, microbiology, and outcomes of ventilator-associated lower respiratory tract infections (VA-LRTI). Methods: Planned ancillary analysis of TAVeM study, including 2960 consecutive adult patients who received invasive mechanical ventilation (MV) > 48 h. COPD patients (n = 494) were compared to non-COPD patients (n = 2466). The diagnosis of ventilator-associated tracheobronchitis (VAT) and ventilator-associated pneumonia (VAP) was based on clinical, radiological and quantitative microbiological criteria. Results: No significant difference was found in VAP (12% versus 13%, p = 0.931), or VAT incidence (13% versus 10%, p = 0.093) between COPD and non-COPD patients. Among patients with VA-LRTI, Escherichia coli and Stenotrophomonas maltophilia were significantly more frequent in COPD patients as compared with non-COPD patients. However, COPD had no significant impact on multidrug-resistant bacteria incidence. Appropriate antibiotic treatment was not significantly associated with progression from VAT to VAP among COPD patients who developed VAT, unlike non-COPD patients. Among COPD patients, patients who developed VAT or VAP had significantly longer MV duration (17 days (9–30) or 15 (8–27) versus 7 (4–12), p < 0.001) and intensive care unit (ICU) length of stay (24 (17–39) or 21 (14–40) versus 12 (8–19), p < 0.001) than patients without VA-LRTI. ICU mortality was also higher in COPD patients who developed VAP (44%), but not VAT(38%), as compared to no VA-LRTI (26%, p = 0.006). These worse outcomes associated with VA-LRTI were similar among non-COPD patients. Conclusions: COPD had no significant impact on incidence or outcomes of patients who developed VAP or VAT.
Applications of Nanocellulose/Nanocarbon Composites: Focus on Biotechnology and Medicine
Authors: Bacakova Lucie , Pajorova Julia , Tomkova Maria , Matejka Roman , Broz Antonin , Stepanovska Jana , Prazak Simon , Skogberg Anne , Siljander Sanna , Kallio Pasi
Published: January 2020

Nanocellulose/nanocarbon composites are newly emerging smart hybrid materials containing cellulose nanoparticles, such as nanofibrils and nanocrystals, and carbon nanoparticles, such as “classical” carbon allotropes (fullerenes, graphene, nanotubes and nanodiamonds), or other carbon nanostructures (carbon nanofibers, carbon quantum dots, activated carbon and carbon black). The nanocellulose component acts as a dispersing agent and homogeneously distributes the carbon nanoparticles in an aqueous environment. Nanocellulose/nanocarbon composites can be prepared with many advantageous properties, such as high mechanical strength, flexibility, stretchability, tunable thermal and electrical conductivity, tunable optical transparency, photodynamic and photothermal activity, nanoporous character and high adsorption capacity. They are therefore promising for a wide range of industrial applications, such as energy generation, storage and conversion, water purification, food packaging, construction of fire retardants and shape memory devices. They also hold great promise for biomedical applications, such as radical scavenging, photodynamic and photothermal therapy of tumors and microbial infections, drug delivery, biosensorics, isolation of various biomolecules, electrical stimulation of damaged tissues (e.g., cardiac, neural), neural and bone tissue engineering, engineering of blood vessels and advanced wound dressing, e.g., with antimicrobial and antitumor activity. However, the potential cytotoxicity and immunogenicity of the composites and their components must also be taken into account.
Frequently Consumed Foods and Energy Contributions among Food Secure and Insecure U.S. Children and Adolescents
Authors: Eicher-Miller Heather A. , Boushey Carol J. , Bailey Regan L. , Yang Yoon Jung
Published: January 2020

Food insecurity is associated with nutritional risk in children. This study identified and compared the most frequently consumed foods, beverages, and food groups and their contributions to energy intake among U.S. children and adolescents (6–11, 12–17 years) by food security status. Dietary intake from the day-1, 24-h dietary recall, and household child food security status were analyzed in the 2007–2014 National Health and Nutrition Examination Survey (n = 8123). Foods and beverages were classified into food categories, ranked, and compared by weighted proportional frequency and energy contribution for food security groups by age. Significant differences between household child food security groups were determined using the Rao-Scott modified chi-square statistic. The weighted proportional frequency of beverages (including diet, sweetened, juice, coffee, and tea) and their energy was significantly higher among food insecure compared with food secure while the reverse was true for water frequency among 12–17 years. Beverage and mixed dish frequency were higher among food insecure compared with food secure 6–11 years while the reverse was true for frequency and energy from snacks. Frequency-differentiated intake patterns for beverages and snacks by food security across age groups may inform dietary recommendations, population-specific dietary assessment tools, interventions, and policy for food insecure children.
A Multi-Sensor Cane Can Detect Changes in Gait Caused by Simulated Gait Abnormalities and Walking Terrains
Authors: Gill Satinder , Seth Nitin , Scheme Erik
Published: January 2020

Due to the increasing rates of chronic diseases and an aging population, the use of assistive devices for ambulation is expected to grow rapidly over the next several years. Instrumenting these devices has been proposed as a non-invasive way to proactively monitor changes in gait due to the presence of pain or a condition in outdoor and indoor environments. In this paper, we evaluated the effectiveness of a multi-sensor cane in detecting changes in gait due to the presence of simulated gait abnormalities, walking terrains, impaired vision, and incorrect cane lengths. The effectiveness of the instrumented cane was compared with the results obtained directly from a shank-mounted inertial measurement unit. Results from 30 healthy participants obtained while simulating gait abnormalities and walking over different terrains demonstrated the ability of the cane to reliably and effectively discriminate among these walking conditions. Moreover, the results obtained while walking with impaired vision and incorrect cane lengths indicate the ability of cane to detect changes in gait during these scenarios as well.
Indoor Navigation Systems for Visually Impaired Persons: Mapping the Features of Existing Technologies to User Needs
Authors: Plikynas Darius , Žvironas Arūnas , Budrionis Andrius , Gudauskis Marius
Published: January 2020

Currently, several outdoor navigation and orientation electronic traveling aid (ETA) solutions for visually impaired (VI) people are commercially available or in active development. This paper’s survey of blind experts has shown that after outdoor navigation, the second most important ETA feature for VI persons is indoor navigation and orientation (in public institutions, supermarkets, office buildings, homes, etc.). VI persons need ETA for orientation and navigation in unfamiliar indoor environments with embedded features for the detection and recognition of obstacles (not only on the ground but also at head level) and desired destinations such as rooms, staircases, and elevators. The development of such indoor navigation systems, which do not have Global Positioning System (GPS) locational references, is challenging and requires an overview and evaluation of existing systems with different navigation technologies. This paper presents an evaluation and comparison of state-of-the-art indoor navigation solutions, and the research implications provide a summary of the critical observations, some insights, and directions for further developments. The paper maps VI needs in relation to research and development (R&D) trends using the evaluation criteria deemed most important by blind experts.
Investigating the Effect of Rock Bridge on the Stability of Locked Section Slopes by the Direct Shear Test and Acoustic Emission Technique
Authors: Guo Qifeng , Pan Jiliang , Cai Meifeng , Zhang Ying
Published: January 2020

As a portion of intact rock separating joint surfaces, rock bridge plays a significant role in the stability of rock slopes. This paper aims to investigate the effect of different rock bridges on the mechanical properties and failure mode of rock slope by means of the direct shear test and acoustic emission technique. Field conditions were simulated in direct shear tests which were carried out on specimens with rock bridges at different continuity rates, normal stress, arrangements, and joint angles. Experimental results indicate that the strength of specimens is controlled by the rock bridge and the structural plane. The rock bridge contributes to the strength of the specimen, while the through plane weakens the strength of the specimen. The increase of normal stress can weaken the stress concentration near the tip of the rock bridge and improve the shear resistance of the specimen. The different arrangement of rock bridge has little effect on the normal displacement of the specimen, and has a great influence on the shear strength. The shear capacity of the specimen is related to the angle of the crack, and the angle of the crack is approximately proportional to the peak shear strength. For the specimens with different joint occurrence, the mode of crack propagation at the initial stage is basically the same, and the specimen is finally damaged due to the generation of through cracks in the core area of rock bridge. The instantaneous release of the huge energy generated during the experiment along the shear direction is the root cause of the sudden failure of the rock bridge. The formation, aggregation, and transfixion process of rock bridge is of concern and has been experimentally investigated in this paper for the prevention and control of the locked section rock slope with sudden disasters.