bluuebunny/crossref_metadata_2025 huggingface dataset:
Proteomic and Phosphoproteomic Analysis Reveals Differential Immune Response to Hirame Novirhabdovirus (HIRRV) Infection in the Flounder (Paralichthys olivaceus) under Different Temperature
Authors: Tang Xiaoqian , Zhang Yingfeng , Xing Jing , Sheng Xiuzhen , Chi Heng , Zhan Wenbin
Published: August 2023

Hirame novirhabdovirus (HIRRV) is one of most serious viral pathogens causing significant economic losses to the flounder (Paralichthys olivaceus)-farming industry. Previous studies have shown that the outbreak of HIRRV is highly temperature-dependent, and revealed the viral replication was significantly affected by the antiviral response of flounders under different temperatures. In the present study, the proteome and phosphoproteome was used to analyze the different antiviral responses in the HIRRV-infected flounder under 10 °C and 20 °C. Post viral infection, 472 differentially expressed proteins (DEPs) were identified in the spleen of flounder under 10 °C, which related to NOD-like receptor signaling pathway, RIG-I-like receptor signaling pathway, RNA transport and so on. Under 20 °C, 652 DEPs were identified and involved in focal adhesion, regulation of actin cytoskeleton, phagosome, NOD-like receptor signaling pathway and RIG-I-like receptor signaling pathway. Phosphoproteome analysis showed that 675 differentially expressed phosphoproteins (DEPPs) were identified in the viral infected spleen under 10 °C and significantly enriched in Spliceosome, signaling pathway, necroptosis and RNA transport. Under 20 °C, 1304 DEPPs were identified and significantly enriched to Proteasome, VEGF signaling pathway, apoptosis, Spliceosome, mTOR signaling pathway, mRNA surveillance pathway, and RNA transport. To be noted, the proteins and phosphoproteins involved in interferon production and signaling showed significant upregulations in the viral infected flounder under 20 °C compared with that under 10 °C. Furthermore, the temporal expression profiles of eight selected antiviral-related mRNA including IRF3, IRF7, IKKβ, TBK1, IFIT1, IFI44, MX1 and ISG15 were detected by qRT-PCR, which showed a significantly stronger response at early infection under 20 °C. These results provided fundamental resources for subsequent in-depth research on the HIRRV infection mechanism and the antiviral immunity of flounder, and also gives evidences for the high mortality of HIRRV-infected flounder under low temperature.
Aggregation of an Amyloidogenic Peptide on Gold Surfaces
Authors: Cheung David L.
Published: August 2023

Solid surfaces have been shown to affect the aggregation and assembly of many biomolecular systems. One important example is the formation of protein fibrils, which can occur on a range of biological and synthetic surfaces. The rate of fibrillation depends on both the protein structure and the surface chemistry, with the different molecular and oligomer structures adopted by proteins on surfaces likely to be crucial. In this paper, the aggregation of the model amyloidogenic peptide, Aβ(16–22), corresponding to a hydrophobic segment of the amyloid beta protein on a gold surface is studied using molecular dynamics simulation. Previous simulations of this peptide on gold surfaces have shown that it adopts conformations on surfaces that are quite different from those in bulk solution. These simulations show that this then leads to significant differences in the oligomer structures formed in solution and on gold surfaces. In particular, oligomers formed on the surface are low in beta-strands so are unlike the structures formed in bulk solution. When oligomers formed in solution adsorb onto gold surfaces they can then restructure themselves. This can then help explain the inhibition of Aβ(16–22) fibrillation by gold surfaces and nanoparticles seen experimentally.
Oxidative Stress in Healthy and Pathological Red Blood Cells
Authors: Orrico Florencia , Laurance Sandrine , Lopez Ana C. , Lefevre Sophie D. , Thomson Leonor , Möller Matias N. , Ostuni Mariano A.
Published: August 2023

Red cell diseases encompass a group of inherited or acquired erythrocyte disorders that affect the structure, function, or production of red blood cells (RBCs). These disorders can lead to various clinical manifestations, including anemia, hemolysis, inflammation, and impaired oxygen-carrying capacity. Oxidative stress, characterized by an imbalance between the production of reactive oxygen species (ROS) and the antioxidant defense mechanisms, plays a significant role in the pathophysiology of red cell diseases. In this review, we discuss the most relevant oxidant species involved in RBC damage, the enzymatic and low molecular weight antioxidant systems that protect RBCs against oxidative injury, and finally, the role of oxidative stress in different red cell diseases, including sickle cell disease, glucose 6-phosphate dehydrogenase deficiency, and pyruvate kinase deficiency, highlighting the underlying mechanisms leading to pathological RBC phenotypes.
Insulin Resistance in Patients with Acne Vulgaris
Authors: Gruszczyńska Michalina , Sadowska-Przytocka Anna , Szybiak Weronika , Więckowska Barbara , Lacka Katarzyna
Published: August 2023

Acne vulgaris presents multifactorial pathogenesis, which may include insulin resistance. To investigate whether insulin resistance is a causative factor in acne vulgaris development, this cohort study and a systematic review were conducted. A cohort of 41 acne vulgaris patients and 47 healthy BMI-matched controls were recruited. Glucose and insulin fasting serum levels were obtained and the HOMA-IR was calculated; insulin resistance was diagnosed in cases with a HOMA-IR value over 2.1. The mean ± SD values for glucose fasting serum level were as follows: 94.88 ± 7.731 (mg/dL) in the study group and 79.51 ± 7.175 (mg/dL) in the controls (p < 0.001). The mean ± SD insulin fasting serum levels were 14.47 ± 6.394 (µIU/mL) and 11.83 ± 4.309 (µIU/mL) (p = 0.059), respectively. The HOMA-IR mean ± SD value calculated for the study group was 3.4 ± 1.49 and, in the control group, it was 2.34 ± 0.909 (p < 0.001). Out of 41 patients, 32 were diagnosed with insulin resistance (78%), and 26 of the 47 controls were diagnosed with IR (55%) (p = 0.026). An insulin resistance diagnosis was statistically more common among the acne patients, compared to the controls. In the articles reviewed in this paper, insulin resistance was found to be more frequent in acne vulgaris patients. Both our study and the papers analyzed in the review indicate that insulin resistance might be an independent factor in acne vulgaris development and should be considered when diagnosing and treating acne.
Risk Factors for Calcium-Phosphate Disorders after Thyroid Surgery
Authors: Sępek Monika , Marciniak Dominik , Głód Mateusz , Kaliszewski Krzysztof , Rudnicki Jerzy , Wojtczak Beata
Published: August 2023

Introduction: Iatrogenic hypoparathyroidism following thyroidectomy is one of the most common complications significantly reducing patients’ quality of life. Objectives: This study aimed to analyze the risk factors for calcium-phosphate disorders following thyroidectomy. Patients and methods: The study group consisted of 211 patients who underwent thyroidectomy for different conditions in 2018–2020. Demographic, clinical and surgical risk factors were analyzed against hypoparathyroidism and hypocalcemia. Results: Hypoparathyroidism occurred in 15.63% of patients, and hypocalcemia occurred in 45% of those operated on. There was statistical significance between hypoparathyroidism and the extent of thyroid surgery: thyroidectomy vs. lobectomy (p = 0.02, OR = 4.5) and surgeon experience (p = 0.016, OR = 6.9). Low preoperative PTH levels were associated with a higher incidence of hypoparathyroidism (p = 0.055, OR = 0.9). There was a statistically significant correlation between the occurrence of hypocalcemia and preoperative vitamin D deficiency (p = 0.04, OR = 3.5). Low calcium levels before surgery were associated with a higher incidence of hypocalcemia (p = 0.051, OR = 0.5). Meta-analyses of selected risk factors confirmed that the most significant factor in the incidence of hypocalcemia was a decrease in PTH levels (p < 0.001). Conclusions: The extent of thyroid surgery and the experience of the surgeon are the most significant risk factors for hypoparathyroidism. Hypocalcemia is much more common than hypoparathyroidism. Among the risk factors for hypocalcemia, in addition to the decrease in parathormone levels due to iatrogenic parathyroid damage, we should mention vitamin D deficiency in the preoperative period.
The Effects of a Biomimetic Hybrid Meso- and Nano-Scale Surface Topography on Blood and Protein Recruitment in a Computational Fluid Dynamics Implant Model
Authors: Kitajima Hiroaki , Hirota Makoto , Osawa Kohei , Iwai Toshinori , Mitsudo Kenji , Saruta Juri , Ogawa Takahiro
Published: August 2023

The mechanisms underlying bone-implant integration, or osseointegration, are still incompletely understood, in particular how blood and proteins are recruited to implant surfaces. The objective of this study was to visualize and quantify the flow of blood and the model protein fibrinogen using a computational fluid dynamics (CFD) implant model. Implants with screws were designed with three different surface topographies: (1) amorphous, (2) nano-trabecular, and (3) hybrid meso-spikes and nano-trabeculae. The implant with nano-topography recruited more blood and fibrinogen to the implant interface than the amorphous implant. Implants with hybrid topography further increased recruitment, with particularly efficient recruitment from the thread area to the interface. Blood movement significantly slowed at the implant interface compared with the thread area for all implants. The blood velocity at the interface was 3- and 4-fold lower for the hybrid topography compared with the nano-topography and amorphous surfaces, respectively. Thus, this study for the first time provides insights into how different implant surfaces regulate blood dynamics and the potential advantages of surface texturization in blood and protein recruitment and retention. In particular, co-texturization with a hybrid meso- and nano-topography created the most favorable microenvironment. The established CFD model is simple, low-cost, and expected to be useful for a wide range of studies designing and optimizing implants at the macro and micro levels.
Fourier Synchrosqueezing Transform-ICA-EMD Framework Based EOG-Biometric Sustainable and Continuous Authentication via Voluntary Eye Blinking Activities
Authors: Gorur Kutlucan
Published: August 2023

In recent years, limited works on EOG (electrooculography)-based biometric authentication systems have been carried out with eye movements or eye blinking activities in the current literature. EOGs have permanent and unique traits that can separate one individual from another. In this work, we have investigated FSST (Fourier Synchrosqueezing Transform)-ICA (Independent Component Analysis)-EMD (Empirical Mode Decomposition) robust framework-based EOG-biometric authentication (one-versus-others verification) performances using ensembled RNN (Recurrent Neural Network) deep models voluntary eye blinkings movements. FSST is implemented to provide accurate and dense temporal-spatial properties of EOGs on the state-of-the-art time-frequency matrix. ICA is a powerful statistical tool to decompose multiple recording electrodes. Finally, EMD is deployed to isolate EOG signals from the EEGs collected from the scalp. As our best knowledge, this is the first research attempt to explore the success of the FSST-ICA-EMD framework on EOG-biometric authentication generated via voluntary eye blinking activities in the limited EOG-related biometric literature. According to the promising results, improved and high recognition accuracies (ACC/Accuracy: ≥99.99% and AUC/Area under the Curve: 0.99) have been achieved in addition to the high TAR (true acceptance rate) scores (≥98%) and low FAR (false acceptance rate) scores (≤3.33%) in seven individuals. On the other hand, authentication and monitoring for online users/students are becoming essential and important tasks due to the increase of the digital world (e-learning, e-banking, or e-government systems) and the COVID-19 pandemic. Especially in order to ensure reliable access, a highly scalable and affordable approach for authenticating the examinee without cheating or monitoring high-data-size video streaming is required in e-learning platforms and online education strategies. Hence, this work may present an approach that offers a sustainable, continuous, and reliable EOG-biometric authentication of digital applications, including e-learning platforms for users/students.
The Potential of Gut Microbiota in Prediction of Stroke-Associated Pneumonia
Authors: Li Zhongyuan , Gu Mengmeng , Sun Huanhuan , Chen Xiangliang , Zhou Junshan , Zhang Yingdong
Published: August 2023

Background: Stroke-associated pneumonia (SAP) is a common stroke complication, and the changes in the gut microbiota composition may play a role. Our study aimed to evaluate the predictive ability of gut microbiota for SAP. Methods: Acute ischemic stroke patients were prospectively enrolled and divided into two groups based on the presence or absence of SAP. The composition of gut microbiota was characterized by the 16S RNA Miseq sequencing. The gut microbiota that differed significantly between groups were incorporated into the conventional risk scores, the Acute Ischemic Stroke-Associated Pneumonia Score (AIS-APS), and the Age, Atrial fibrillation, Dysphagia, Sex, Stroke Severity Score (A2DS2). The predictive performances were assessed in terms of the area under the curve (AUC), the Net Reclassification Improvement (NRI), and the Integrated Discrimination Improvement (IDI) indices. Results: A total of 135 patients were enrolled, of whom 43 had SAP (31%). The short-chain fatty acids (SCFAs)-producing bacteria, such as Bacteroides, Fusicatenibacter, and Butyricicoccus, were decreased in the SAP group. The integrated models showed better predictive ability for SAP (AUC = 0.813, NRI = 0.333, p = 0.052, IDI = 0.038, p = 0.018, for AIS-APS; AUC = 0.816, NRI = 0.575, p < 0.001, IDI = 0.043, p = 0.007, for A2DS2) in comparison to the differential genera (AUC = 0.699) and each predictive score (AUCAISAPS = 0.777; AUCA2DS2 = 0.777). Conclusions: The lower abundance of SCFAs-producing gut microbiota after acute ischemic stroke was associated with SAP and may play a role in SAP prediction.
Altered Estrous Cyclicity and Feeding Neurocircuitry, but Not Cardiovascular Indices in Female Offspring from Dams with Previous Vertical Sleeve Gastrectomy Surgery
Authors: Johnson Seth , Welch Taylor N. , Aravindan Nandini , Spann Redin A. , Welch Bradley A. , Grayson Bernadette E.
Published: August 2023

Metabolic syndrome (MetS), which includes obesity, diabetes, hypertension, hyperlipidemia, and fatty-liver disease, affects more than two-thirds of the U.S. population. Surgical weight loss has been popularized in the last several decades as a means to produce significant weight loss and improvements in the comorbidities of MetS. Women are by far the most common recipients of these surgeries (more than 85%). Women of childbearing age are very likely to pursue surgical weight loss to improve their reproductive function and fertility for childbearing purposes. Significant research using pre-clinical models from our laboratory and clinical data from around the world suggest that surgical weight loss before pregnancy may have negative consequences for offspring. The present study investigates the metabolic endpoints in female-rodent offspring born to dams who had previously received vertical sleeve gastrectomy (VSG) before pregnancy. Comparisons were made to offspring from lean and obese dams. In the adult offspring of either maternal VSG or sham surgery, no differences in body weight, body fat, or lean body mass between groups were identified. The blood pressure measured in a subset of female offspring showed no differences between the VSG and the sham groups. Estrus cyclicity measured by lavage on serial days showed altered cycles in the VSG offspring compared to the controls. For animals that had previously only been exposed to chow, rats were fasted overnight and then given a 1 g meal of either chow or a novel high-fat diet (HFD). The animals were euthanized and paraformaldehyde (PFA)-perfused to perform brain immunohistochemistry for c-Fos, an immediate–early gene activated by novel stimuli. In the VSG rats exposed to either the chow or the HFD meal, the c-Fos-activated cells were significantly blunted in the nucleus of the solitary tract (p < 0.05), the paraventricular nucleus of the hypothalamus (PVN) (p < 0.05), and the dorsal medial nucleus of the hypothalamus (DMH) (p < 0.05) in comparison to the sham controls. These data suggest that the hypothalamic wiring within the brain that controls the response to nutrients and reproductive function was significantly altered in the VSG offspring compared to the offspring of the dams that did not receive weight-loss surgery.
Individualized Vibrotactile Neurofeedback Training in Patients with Chronic Bilateral Vestibulopathy
Authors: Basta Dietmar , Rossi-Izquierdo Marcos , Wonneberger Kai , Brugnera Cibele , Bittar Roseli Saraiva Moreira , Greters Mário Edvin , Ernst Arne , Soto-Varela Andrés
Published: August 2023

Patients with bilateral vestibulopathy (BVP) suffer from postural imbalance during daily life conditions, which in turn leads to a high frequency of falls. Unfortunately, vestibular rehabilitation has only modest and somewhat inconsistent effects in this patient group. Approximately 50% of BVP patients show an improved postural control after conventional vestibular rehabilitation training. New and more promising approaches are required. The individualized vibrotactile neurofeedback training (IVNT) in stance and gait conditions has already been described as highly effective in patients with various vestibular disorders. The purpose of the present multicenter study was to determine the efficacy of the IVNT in improving balance, reducing self-perceived disability, and improving gait in patients with confirmed BVP. In total, 22 patients performed the IVNT with the Vertiguard® system for 10 daily sessions. The dizziness handicap inventory (DHI), the stance stability score of the sensory organization test (SOT) and the score for everyday life mobility in stance and gait tasks (SBDT) were obtained immediately before and after the rehabilitation training period, as well as 3 and 12 months later. All measures improved significantly after the IVNT. Between 77.3% and 94.4% of patients showed an individual benefit (depending on outcome measure). The effect was not significantly reduced within the follow-up period of 12 months. The results demonstrate a high efficacy of the IVNT for vestibular rehabilitation in BVP patients.
Carbon-Neutral ESG Method Based on PV Energy Generation Prediction Model in Buildings for EV Charging Platform
Authors: Yoon Guwon , Kim Seunghwan , Shin Haneul , Cho Keonhee , Jang Hyeonwoo , Lee Tacklim , Choi Myeong-in , Kang Byeongkwan , Park Sangmin , Lee Sanghoon , Park Junhyun , Jung Hyeyoon , Shmilovitz Doron , Park Sehyun
Published: August 2023

Energy prediction models and platforms are being developed to achieve carbon-neutral ESG, transition buildings to renewable energy, and supply sustainable energy to EV charging infrastructure. Despite numerous studies on machine learning (ML)-based prediction models for photovoltaic (PV) energy, integrating models with carbon emission analysis and an electric vehicle (EV) charging platform remains challenging. To overcome this, we propose a building-specific long short-term memory (LSTM) prediction model for PV energy supply. This model simulates the integration of EV charging platforms and offer solutions for carbon reduction. Integrating a PV energy prediction model within buildings and EV charging platforms using ICT is crucial to achieve renewable energy transition and carbon neutrality. The ML model uses data from various perspectives to derive operational strategies for energy supply to the grid. Additionally, simulations explore the integration of PV-EV charging infrastructure, EV charging control based on energy, and mechanisms for sharing energy, promoting eco-friendly charging. By comparing carbon emissions from fossil-fuel-based sources with PV energy sources, we analyze the reduction in carbon emission effects, providing a comprehensive understanding of carbon reduction and energy transition through energy prediction. In the future, we aim to secure economic viability in the building energy infrastructure market and establish a carbon-neutral city by providing a stable energy supply to buildings and EV charging infrastructure. Through ongoing research on specialized models tailored to the unique characteristics of energy domains within buildings, we aim to contribute to the resolution of inter-regional energy supply challenges and the achievement of carbon reduction.
Diamond as Insulation for Conductive Diamond—A Spotted Pattern Design for Miniaturized Disinfection Devices
Authors: Zulla Manuel , Vierheilig Vera , Koch Maximilian , Burkovski Andreas , Karl Matthias , Rosiwal Stefan
Published: August 2023

Boron-doped diamond (BDD) electrodes are well known for the in situ production of strong oxidants. These antimicrobial agents are produced directly from water without the need of storage or stabilization. An in situ production of reactive oxygen species (ROS) used as antimicrobial agents has also been used in recently developed medical applications. Although BDD electrodes also produce ROS during water electrolysis, only a few medical applications have appeared in the literature to date. This is probably due to the difficulties in the miniaturization of BDD electrodes, while maintaining a stable and efficient electrolytic process in order to obtain a clinical applicability. In this attempt, a cannula-based electrode design was achieved by insulating the anodic diamond layer from a cathodic cannula, using a second layer of non-conducting diamond. The undoped diamond (UDD) layer was successfully grown in a spotted pattern, resulting in a perfectly insulated yet still functional BDD layer, which can operate as a miniaturized flow reactor for medical applications. The spotted pattern was achieved by introducing a partial copper layer on top of the BDD layer, which was subsequently removed after growing the undoped diamond layer via etching. The initial analytical observations showed promising results for further chemical and microbial investigations.
The Long Non-Coding RNA ANRIL in Cancers
Authors: Sanchez Aymeric , Lhuillier Julien , Grosjean Guillaume , Ayadi Lilia , Maenner Sylvain
Published: August 2023

ANRIL (Antisense Noncoding RNA in the INK4 Locus), a long non-coding RNA encoded in the human chromosome 9p21 region, is a critical factor for regulating gene expression by interacting with multiple proteins and miRNAs. It has been found to play important roles in various cellular processes, including cell cycle control and proliferation. Dysregulation of ANRIL has been associated with several diseases like cancers and cardiovascular diseases, for instance. Understanding the oncogenic role of ANRIL and its potential as a diagnostic and prognostic biomarker in cancer is crucial. This review provides insights into the regulatory mechanisms and oncogenic significance of the 9p21 locus and ANRIL in cancer.
Prostate Region-Wise Imaging Biomarker Profiles for Risk Stratification and Biochemical Recurrence Prediction
Authors: Sánchez Iglesias Ángel , Morillo Macías Virginia , Picó Peris Alfonso , Fuster-Matanzo Almudena , Nogué Infante Anna , Muelas Soria Rodrigo , Bellvís Bataller Fuensanta , Domingo Pomar Marcos , Casillas Meléndez Carlos , Yébana Huertas Raúl , Ferrer Albiach Carlos
Published: August 2023

Background: Identifying prostate cancer (PCa) patients with a worse prognosis and a higher risk of biochemical recurrence (BCR) is essential to guide treatment choices. Here, we aimed to identify possible imaging biomarker (perfusion/diffusion + radiomic features) profiles extracted from MRIs that were able to discriminate patients according to their risk or the occurrence of BCR 10 years after diagnosis, as well as to evaluate their predictive value with or without clinical data. Methods: Patients with localized PCa receiving neoadjuvant androgen deprivation therapy and radiotherapy were retrospectively evaluated. Imaging features were extracted from MRIs for each prostate region or for the whole gland. Univariate and multivariate analyses were conducted. Results: 128 patients (mean [range] age, 71 [50–83] years) were included. Prostate region-wise imaging biomarker profiles mainly composed of radiomic features allowed discriminating risk groups and patients experiencing BCR. Heterogeneity-related radiomic features were increased in patients with worse prognosis and with BCR. Overall, imaging biomarkers profiles retained good predictive ability (AUC values superior to 0.725 in most cases), which generally improved when clinical data were included (particularly evident for the prediction of the BCR, with AUC values ranging from 0.841 to 0.877 for combined models and sensitivity values above 0.960) and when models were built per prostate region vs. the whole gland. Conclusions: Prostate region-aware imaging profiles enable identification of patients with worse prognosis and with a higher risk of BCR, retaining higher predictive values when combined with clinical variables.
Surgery for Solitary Fibrous Tumors of the Pleura: A Review of the Available Evidence
Authors: Bertoglio Pietro , Querzoli Giulia , Kestenholz Peter , Scarci Marco , La Porta Marilina , Solli Piergiorgio , Minervini Fabrizio
Published: August 2023

Solitary fibrous tumors of the pleura (pSFT) are a relatively rare neoplasms that can arise from either visceral or parietal pleura and may have different aggressive biological behaviors. Surgery is well known to be the cornerstone of the treatment for pSFT. We reviewed the existing literature, focusing on the role of surgery in the management and treatment of pSFT. All English-written literature has been reviewed, focusing on those reporting on the perioperative management and postoperative outcomes. Surgery for pSFT is feasible and safe in all experiences reported in the literature, but surgical approaches and techniques may vary according to the tumor dimensions, localization, and surgeons’ skills. Long-term outcomes are good, with a 10-year overall survival rate of more than 70% in most of the reported experiences; on the other hand, recurrence may happen in up to 17% of cases, which occurs mainly in the first two years after surgery, but case reports suggest the need for a longer follow-up to assess the risk of late recurrence. Malignant histology and dimensions are the most recognized risk factors for recurrence. Recurrence might be operated on in select patients. Surgery is the treatment of choice in pSFT, but a radical resection and a careful postoperative follow-up should be carried out.
Brain Tumor Detection Based on Deep Learning Approaches and Magnetic Resonance Imaging
Authors: Abdusalomov Akmalbek Bobomirzaevich , Mukhiddinov Mukhriddin , Whangbo Taeg Keun
Published: August 2023

The rapid development of abnormal brain cells that characterizes a brain tumor is a major health risk for adults since it can cause severe impairment of organ function and even death. These tumors come in a wide variety of sizes, textures, and locations. When trying to locate cancerous tumors, magnetic resonance imaging (MRI) is a crucial tool. However, detecting brain tumors manually is a difficult and time-consuming activity that might lead to inaccuracies. In order to solve this, we provide a refined You Only Look Once version 7 (YOLOv7) model for the accurate detection of meningioma, glioma, and pituitary gland tumors within an improved detection of brain tumors system. The visual representation of the MRI scans is enhanced by the use of image enhancement methods that apply different filters to the original pictures. To further improve the training of our proposed model, we apply data augmentation techniques to the openly accessible brain tumor dataset. The curated data include a wide variety of cases, such as 2548 images of gliomas, 2658 images of pituitary, 2582 images of meningioma, and 2500 images of non-tumors. We included the Convolutional Block Attention Module (CBAM) attention mechanism into YOLOv7 to further enhance its feature extraction capabilities, allowing for better emphasis on salient regions linked with brain malignancies. To further improve the model’s sensitivity, we have added a Spatial Pyramid Pooling Fast+ (SPPF+) layer to the network’s core infrastructure. YOLOv7 now includes decoupled heads, which allow it to efficiently glean useful insights from a wide variety of data. In addition, a Bi-directional Feature Pyramid Network (BiFPN) is used to speed up multi-scale feature fusion and to better collect features associated with tumors. The outcomes verify the efficiency of our suggested method, which achieves a higher overall accuracy in tumor detection than previous state-of-the-art models. As a result, this framework has a lot of potential as a helpful decision-making tool for experts in the field of diagnosing brain tumors.
The Transcription Factor HOXA5: Novel Insights into Metabolic Diseases and Adipose Tissue Dysfunction
Authors: Parrillo Luca , Spinelli Rosa , Longo Michele , Zatterale Federica , Santamaria Gianluca , Leone Alessia , Campitelli Michele , Raciti Gregory Alexander , Beguinot Francesco
Published: August 2023

The transcription factor HOXA5, from the HOX gene family, has long been studied due to its critical role in physiological activities in normal cells, such as organ development and body patterning, and pathological activities in cancer cells. Nonetheless, recent evidence supports the hypothesis of a role for HOXA5 in metabolic diseases, particularly in obesity and type 2 diabetes (T2D). In line with the current opinion that adipocyte and adipose tissue (AT) dysfunction belong to the group of primary defects in obesity, linking this condition to an increased risk of insulin resistance (IR) and T2D, the HOXA5 gene has been shown to regulate adipocyte function and AT remodeling both in humans and mice. Epigenetics adds complexity to HOXA5 gene regulation in metabolic diseases. Indeed, epigenetic mechanisms, specifically DNA methylation, influence the dynamic HOXA5 expression profile. In human AT, the DNA methylation profile at the HOXA5 gene is associated with hypertrophic obesity and an increased risk of developing T2D. Thus, an inappropriate HOXA5 gene expression may be a mechanism causing or maintaining an impaired AT function in obesity and potentially linking obesity to its associated disorders. In this review, we integrate the current evidence about the involvement of HOXA5 in regulating AT function, as well as its association with the pathogenesis of obesity and T2D. We also summarize the current knowledge on the role of DNA methylation in controlling HOXA5 expression. Moreover, considering the susceptibility of epigenetic changes to reversal through targeted interventions, we discuss the potential therapeutic value of targeting HOXA5 DNA methylation changes in the treatment of metabolic diseases.
Activated Lymphocyte-Derived DNA Drives Glucose Metabolic Adaptation for Inducing Macrophage Inflammatory Response in Systemic Lupus Erythematosus
Authors: Zhao Hanqing , Wen Zhenke , Xiong Sidong
Published: August 2023

Activated lymphocyte-derived DNA (ALD-DNA) has been reported to drive the polarization of macrophages toward M2b, producing inflammatory cytokines and inducing inflammation, correspondingly playing an essential role in the development of systemic lupus erythematosus (SLE). Recently, accumulating evidence has pinpointed metabolic adaptation as the crucial cell-intrinsic determinant for inflammatory response, in which glucose metabolism is the key event. However, whether and how glucose metabolism was involved in ALD-DNA-induced macrophage inflammatory response and SLE development remains unclear. Herein, we performed glucose metabolomic analyses of ALD-DNA-stimulated macrophages and uncovered increased glycolysis and diminished pentose phosphate pathway (PPP), as well as enhanced glycogenesis. In ALD-DNA-stimulated macrophages, increased glycolysis resulted in higher lactate production, whereas diminished PPP efficiently led to lower levels of nicotinamide adenine dinucleotide phosphate (NADPH) with higher levels of reactive oxygen species (ROS). While blockade of lactate generation exerted no significant effect on macrophage inflammation in response to ALD-DNA, scavenging ROS fundamentally inhibited the inflammatory response of ALD-DNA-stimulated macrophages. Further, cyclic adenosine monophosphate (cAMP), a master for regulating glycogen metabolism, was downregulated by ALD-DNA in macrophages, which subsequently imbalanced glycogen metabolism toward glycogenesis but not glycogenolysis. Administration of cAMP effectively restored glycogenolysis and enhanced PPP, which correspondingly reduced ROS levels and inhibited the inflammatory response of ALD-DNA-stimulated macrophages. Finally, blocking glucose metabolism using 2-deoxy-D-glucose (2-DG) efficiently restricted macrophage inflammatory response and alleviated ALD-DNA-induced lupus disease. Together, our findings demonstrate that ALD-DNA drives the adaptation of glucose metabolism for inducing macrophage inflammatory response in SLE, which might further our understanding of disease pathogenesis and provide clues for interventive explorations.
Regional Socioeconomic Deprivation in Germany and Adherence to the 24-h Movement Guidelines among Children and Adolescents
Authors: Suchert Vivien , Hanewinkel Reiner , Neumann Clemens , Hansen Julia
Published: August 2023

To examine the relationship between regional socioeconomic deprivation and adherence to the 24-h movement guidelines among children and adolescents, a cross-sectional study was conducted. A total of 17,433 students aged 9–17 participated in a survey in winter 2021/2022. Daily screen time (ST), moderate-to-vigorous physical activity (MVPA), and sleep behavior were outcome variables. The German Index of Socioeconomic Deprivation (GISD), a regional socioeconomic objective measure, was the exposure variable. Associations between GISD and health behaviors were examined using regression models. Models were adjusted for age, gender, school type, and individual self-reported socioeconomic status (SES). The proportions of meeting the MVPA, ST, and sleep duration guidelines were 14%, 22%, and 34%, respectively. A total of 2.3% met all guidelines. Students from the most deprived communities were half as likely to meet all three guidelines compared to students from the most affluent regions (OR = 0.49 [0.28; −0.03], p = 0.010). There was a consistent relationship between GISD and lower levels of adherence to screen time guidelines (most deprived compared to most affluent: OR = 0.49 [0.38; 0.64], p < 0.001). There was no association between GISD and adherence to sleep time guidelines. We found mixed results for the association between GISD and MVPA. Regional SES appears to be an important factor associated with screen time. Screen time should be limited through intervention programs, especially in disadvantaged areas. Parents should be made aware of their children’s increased media consumption. Recommendations for screen time should be clearly communicated, as should the health disadvantages of increased media consumption in childhood and adolescence.
A Comprehensive Literature Review on Polymer-Modified Asphalt Binder
Authors: Emtiaz Mostafiz , Imtiyaz Md Nafis , Majumder Mishuk , Idris Ipshit Ibne , Mazumder Roni , Rahaman Md Mafuzur
Published: August 2023

Due to periodic variations in temperature and heavy traffic loading, hot-mix asphalt (HMA) pavements undergo considerable distress during their service life. The rheological properties of asphalt binder, when subjected to complex physical and chemical processes, make it stiff and sometimes brittle, which ultimately plays a huge part in pavement deterioration. This phenomenon is commonly known as asphalt aging. Incorporating polymer modifiers with virgin asphalt can work as an effective means to change the binder properties and alleviate the issues related to asphalt aging. Different types of polymers, including elastomers, plastomers, and reactive polymers, can mixed in different combinations with the virgin asphalt to create polymer-modified binders (PMBs). In general, polymers are typically added to the virgin asphalt binder in PMB manufacturing at weight percentages ranging from 3% to 7%. Previous research suggests that many polymer-modified binders (PMBs) show great resiliency and perform extremely well during field and laboratory testing, although the complex nature of asphalt itself makes it significantly difficult to understand the relationship and compatibility of the asphalt–polymer system. This paper aims to develop a comprehensive literature review on the chemical aspects, microscopic structure, and compatibility of polymers with virgin asphalt. It was found that swelling, storage stability, blend morphology, and the polymer mixing technique play a great role in the compatibility of asphalt–polymer systems. Thermoplastic elastomers (e.g., styrene–butadiene–styrene) and plastomers (e.g., ethylene–vinyl acetate) are the most used polymer modifiers for asphalt binders. The compatibility of the polymer–asphalt system can be improved by sulfur vulcanization, antioxidants, hydrophobic clay minerals, functionalization, and reactive polymers, among other techniques.
Overview of Movement Disorders Secondary to Drugs
Authors: Rissardo Jamir Pitton , Vora Nilofar , Mathew Bejoi , Kashyap Vikas , Muhammad Sara , Fornari Caprara Ana Letícia
Published: August 2023

Drug-induced movement disorders affect a significant percentage of individuals, and they are commonly overlooked and underdiagnosed in clinical practice. Many comorbidities can affect these individuals, making the diagnosis even more challenging. Several variables, including genetics, environmental factors, and aging, can play a role in the pathophysiology of these conditions. The Diagnostic and Statistical Manual of Mental Disorders (DSM) and the International Statistical Classification of Diseases and Related Health Problems (ICD) are the most commonly used classification systems in categorizing drug-induced movement disorders. This literature review aims to describe the abnormal movements associated with some medications and illicit drugs. Myoclonus is probably the most poorly described movement disorder, in which most of the reports do not describe electrodiagnostic studies. Therefore, the information available is insufficient for the diagnosis of the neuroanatomical source of myoclonus. Drug-induced parkinsonism is rarely adequately evaluated but should be assessed with radiotracers when these techniques are available. Tardive dyskinesias and dyskinesias encompass various abnormal movements, including chorea, athetosis, and ballism. Some authors include a temporal relationship to define tardive syndromes for other movement disorders, such as dystonia, tremor, and ataxia. Antiseizure medications and antipsychotics are among the most thoroughly described drug classes associated with movement disorders.
Quadrotor Trajectory Tracking Using Model Reference Adaptive Control, Neural Network-Based Parameter Uncertainty Compensator, and Different Plant Parameterizations
Authors: Glushchenko Anton , Lastochkin Konstantin
Published: August 2023

A quadrotor trajectory tracking problem is addressed via the design of a model reference adaptive control (MRAC) system. As for real-world applications, the entire quadrotor dynamics is typically unknown. To take that into account, we consider a plant model, which contains uncertain nonlinear terms resulting from aerodynamic friction, blade flapping, and the fact that the mass and inertia moments of the quadrotor may change from their nominal values. Unlike many known studies, the explicit equations of the parameter uncertainty for the position control loop are derived in two different ways using the differential flatness approach: the control signals are (i) used and (ii) not used in the parametric uncertainty parameterization. After analysis, the neural network (NN) is chosen for both cases as a compensator of such uncertainty, and the set of NN input signals is justified for each of them. Unlike many known MRAC systems with NN for quadrotors, in this study, we use the kxx+krr baseline controller, which follows from the control system derivation, with both time-invariant (parameterization (i)) and adjustable (parameterization (ii)) parameters instead of an arbitrarily chosen non-tunable PI/PD/PID-like one. Adaptive laws are derived to adjust the parameters of NN uncertainty compensator for both parameterizations. As a result, the position controller ensures the asymptotic stability of the tracking error for both cases under the assumption of perfect attitude loop tracking, which is ensured in the system previously developed by the authors. The results of the numerical experiments support the theoretical conclusions and provide a comparison of the effectiveness of the derived parameterizations. They also allow us to make conclusions on the necessity of the baseline controller adjustment.
Superlattices, Bonding-Antibonding, Fermi Surface Nesting, and Superconductivity
Authors: Alarco Jose A. , Mackinnon Ian D. R.
Published: August 2023

Raman and synchrotron THz absorption spectral measurements on MgB2 provide experimental evidence for electron orbital superlattices. In earlier work, we have detected THz spectra that show superlattice absorption peaks with low wavenumbers, for which spectral density evolves and intensifies after cooling below the superconducting transition temperature for MgB2. In this work, we show how these observations indicate a direct connection to superconducting properties and mechanisms. Bonding–antibonding orbital character is identified in calculated electronic band structures and Fermi surfaces consistent with superlattice structures along the c-axis. DFT calculations show that superlattice folding of reciprocal space generates Brillouin zone boundary reflections, Umklapp processes, and substantially enhances nesting relationships. Tight binding equations are compared with expected charge density waves from nesting relationships and adjusted to explicitly accommodate these linked processes. Systematic analysis of electronic band structures and Fermi surfaces allows for direct identification of Cooper pairing and the superconducting gap, particularly when the k-grid resolution of a calculation is suitably calibrated to structural parameters. Thus, we detail a robust and accurate DFT re-interpretation of BCS superconductivity for MgB2.
Morphological/Dynamic Instability of Directional Crystallization in a Finite Domain with Intense Convection
Authors: Makoveeva Eugenya V. , Koroznikova Irina E. , Glebova Alexandra E. , Alexandrov Dmitri V.
Published: August 2023

This study is devoted to the morphological/dynamic instability analysis of directional crystallization processes in finite domains with allowance for melt convection. At first, a linear instability theory for steady-state crystallization with a planar solid/liquid interface in the presence of convection was developed. We derived and analyzed a dispersion relation showing the existence of morphological instability over a wide range of wavenumbers. This instability results from perturbations arriving at the solid/liquid interface from the cooled wall through the solid phase. Also, we showed that a planar solid/liquid interface can be unstable when it comes to dynamic perturbations with a zero wavenumber (perturbations in its steady-state velocity). A branch of stable solutions for dynamic perturbations is available too. The crystallizing system can choose one of these branches (unstable or stable) depending of the action of convection. The result of morphological and dynamic instabilities is the appearance of a two-phase (mushy) layer ahead of the planar solid/liquid interface. Therefore, our next step was to analyze the dynamic instability of steady-state crystallization with a mushy layer, which was replaced by a discontinuity interface between the purely solid and liquid phases. This analysis showed the existence of dynamic instability over a wide range of crystallization velocities. This instability appears in the solid material at the cooled wall and propagates to the discontinuity interface, mimicking the properties of a mushy layer. As this takes place, at a certain crystallization velocity, a bifurcation of solutions occurs, leading to the existence of unstable and stable crystallization branches simultaneously. In this case, the system chooses one of them depending of the effect of the convection as before. In general, the crystallizing system may be morphologically/dynamically unstable when it comes to small perturbations arriving at the phase interface due to fluctuations in the heat and mass exchange equipment (e.g., fluctuations in the freezer temperature).
Trainee Evaluations of Preparedness for Clinical Trials in Medical Oncology—A National Questionnaire
Authors: Febbraro Michela , Kazemi Ghazaleh , Juergens Rosalyn , Pond Gregory R.
Published: August 2023

Background: A standardized approach to the education of clinical trial investigators across Canadian medical oncology (MO) subspecialty training does not exist. With training programs transitioning to competency-based medical education (CBME), studies assessing education practices and competence are paramount to enhancing trainee education. This study aimed to determine whether current education practices in MO subspecialty training programs in Canada prepare trainees for participating in clinical trials as an investigator. Methods: From November 2021 to February 2022 a national, bilingual, online questionnaire to understand trainee experiences with self-perceived competence, preparedness, and willingness to participate in clinical trials as investigators was conducted. MO trainees, fellows, and new-to-practice physicians who completed an MO subspecialty training program in Canada were included. Results: A total of 41 responses were received (response rate: 15%). Formal training in how to participate in clinical trials as an investigator was reported by 73% of respondents. At the end of training, 65% of respondents rated competence in clinical trials as fair/poor and 74% rated preparedness in conducting clinical trials as fair/poor. Correlation analysis determined that in-clinic teaching in clinical trials trended toward improved self-evaluations of competence and preparedness (p > 0.05). Conclusion: This is the first study in Canada to assess competencies in any residency training program since the establishment of CBME. Training in conducting clinical trials is highly variable across MO programs in Canada, with most trainees finding current practices not translating into self-perceived competence and preparedness. Further assessment into how to produce competent clinical trial investigators is warranted.