bluuebunny/crossref_metadata_2025 huggingface dataset:
Supplementary Figure S2 from Plasma MicroRNAs as Novel Biomarkers for Patients with Intraductal Papillary Mucinous Neoplasms of the Pancreas
Authors: Permuth-Wey Jennifer , Chen Dung-Tsa , Fulp William J. , Yoder Sean J. , Zhang Yonghong , Georgeades Christina , Husain Kazim , Centeno Barbara Ann , Magliocco Anthony M. , Coppola Domenico , Malafa Mokenge
Published: April 2023

miR-145-5p expression differentiates between cases and non-diseased controls. A) Box plot reveals miR-145-5p expression is higher in cases versus controls. B) ROC analysis reveals that miR-145-5p expression can differentiate between groups with an AUC=79.3 (95% CI: 68.3-90.3). Estimates of sensitivity, specificity, positive predictive value, and negative predictive value are 81%, 62.5%, 79%, and 65%, respectively.
Supplementary Figure A from Chemoprevention of Colon Cancer in a Rat Carcinogenesis Model Using a Novel Nanotechnology-Based Combined Treatment System
Authors: Chaudhary Abhishek , Sutaria Dhruvitkumar , Huang Ying , Wang Jeffrey , Prabhu Sunil
Published: April 2023

PDF file - 120K
Supplementary Table 4 from Mammary Gland Density Predicts the Cancer Inhibitory Activity of the N-3 to N-6 Ratio of Dietary Fat
Authors: Zhu Zongjian , Jiang Weiqin , McGinley John N. , Prokopczyk Bogden , Richie John P. , El Bayoumy Karam , Manni Andrea , Thompson Henry J.
Published: April 2023

PDF file - 79K
Supplementary Table 1 from Mammary Gland Density Predicts the Cancer Inhibitory Activity of the N-3 to N-6 Ratio of Dietary Fat
Authors: Zhu Zongjian , Jiang Weiqin , McGinley John N. , Prokopczyk Bogden , Richie John P. , El Bayoumy Karam , Manni Andrea , Thompson Henry J.
Published: April 2023

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Supplementary Material from Prevention of Chemically Induced Urinary Bladder Cancers by Naproxen: Protocols to Reduce Gastric Toxicity in Humans Do Not Alter Preventive Efficacy
Authors: Lubet Ronald A. , Scheiman James M. , Bode Ann , White Jonathan , Minasian Lori , Juliana M. Margaret , Boring Daniel L. , Steele Vernon E. , Grubbs Clinton J.
Published: April 2023

Detailed Description of Naproxen Quantitation
Supplemental Tables 1-4 from Inclusion of a Genetic Risk Score into a Validated Risk Prediction Model for Colorectal Cancer in Japanese Men Improves Performance
Authors: Iwasaki Motoki , Tanaka-Mizuno Sachiko , Kuchiba Aya , Yamaji Taiki , Sawada Norie , Goto Atsushi , Shimazu Taichi , Sasazuki Shizuka , Wang Hansong , Marchand Loïc Le , Tsugane Shoichiro
Published: April 2023

S1. Hazard ratios (HRs) and 95% confidence intervals (CIs) for colorectal cancer by variants identified by genome-wide association studies. S2. Hazard ratios (HRs) and 95% confidence intervals (CIs) for colon and rectal cancers according to variables included in the three models. S3. Comparison of predictive performance between risk prediction models for colon and rectal cancers based on the 5-fold cross-validation method. S4. Comparison of predictive performance between risk prediction models for colon and rectal cancers based on the full sampled cohort.
Supplementary Figure S1-S5 from Single-cell RNA Sequencing Reveals How the Aryl Hydrocarbon Receptor Shapes Cellular Differentiation Potency in the Mouse Colon
Authors: Yang Yongjian , Osorio Daniel , Davidson Laurie A. , Han Huajun , Mullens Destiny A. , Jayaraman Arul , Safe Stephen , Ivanov Ivan , Cai James J. , Chapkin Robert S.
Published: April 2023

Supplemental Figure S1. TdTomato expression in cells. Supplemental Figure S2. Quality control metric as assessed by mitochondrial proportion (Mt DNA%). Supplemental Figure S3. Numbers of cells obtained from different samples before and after the quality control filtering of scRNA-seq data. Supplemental Figure S4. Dot plots show normalized expression levels of Ahr target genes in WT and KO samples. Supplemental Figure S5. Interaction plots of GUCA, MIF, and EGF pathways.
Supplementary Table 1 from A Randomized Multicenter Phase II Study of Docosahexaenoic Acid in Patients with a History of Breast Cancer, Premalignant Lesions, or Benign Breast Disease
Authors: Gucalp Ayca , Zhou Xi K. , Cook Elise D. , Garber Judy E. , Crew Katherine D. , Nangia Julie R. , Bhardwaj Priya , Giri Dilip D. , Elemento Olivier , Verma Akanksha , Wang Hanhan , Lee J. Jack , Vornik Lana A. , Mays Carrie , Weber Diane , Sepeda Valerie , O'Kane Holly , Krasne Margaret , Williams Samantha , Morris Patrick G. , Heckman-Stoddard Brandy M. , Dunn Barbara K. , Hudis Clifford A. , Brown Powel H. , Dannenberg Andrew J.
Published: April 2023

Clinicopathologic features stratified by treatment arm (RNA-seq analysis population).
Supplementary Table from Development and Validation of a Noninvasive Risk Score Model for Liver Cirrhosis in At-Risk Alcohol Drinkers Without HBV/HCV Infection
Authors: Liu Yin , Guo Lan-Wei , Xu Hui-Fang , Kang Rui-Hua , Zheng Li-Yang , Zhang Lu-Yao , Chen Qiong , Sun Xi-Bin , Qiao You-Lin , Zhang Shao-Kai
Published: April 2023

Supplementary Table from Development and Validation of a Noninvasive Risk Score Model for Liver Cirrhosis in At-Risk Alcohol Drinkers Without HBV/HCV Infection
Supplementary Figure S1 from Proof of Concept of a Personalized Genetic Risk Tool to Promote Smoking Cessation: High Acceptability and Reduced Cigarette Smoking
Authors: Ramsey Alex T. , Bourdon Jessica L. , Bray Michael , Dorsey Amelia , Zalik Maia , Pietka Amanda , Salyer Patricia , Chen Li-Shiun , Baker Timothy B. , Munafò Marcus R. , Bierut Laura J.
Published: April 2023

Change in smoking by RiskProfile status, smoking heaviness, and level of genetic risk
Supplementary Data File 1 from Proof of Concept of a Personalized Genetic Risk Tool to Promote Smoking Cessation: High Acceptability and Reduced Cigarette Smoking
Authors: Ramsey Alex T. , Bourdon Jessica L. , Bray Michael , Dorsey Amelia , Zalik Maia , Pietka Amanda , Salyer Patricia , Chen Li-Shiun , Baker Timothy B. , Munafò Marcus R. , Bierut Laura J.
Published: April 2023

Completer analyses and Expectation-Maximization algorithm analyses
Supplementary Figures from PAK1 Promotes Intestinal Tumor Initiation
Authors: Dammann Kyle , Khare Vineeta , Harpain Felix , Lang Michaela , Kurtovic Azra , Mesteri Ildiko , Evstatiev Rayko , Gasche Christoph
Published: April 2023

Supplementary Figure 1. PAK1 regulates β-catenin expression throughout the intestine. Supplementary Figure 2. PAK1 regulates β-catenin signaling in APCmin adenomas. Supplementary Figure 3 (A-E). Effect of PAK1 deletion on tumorigenesis in an AOM/DSS model. Supplementary Figure 4 (A-E). Inhibition of PAK1 impedes AKT/ β-catenin signaling in AOM/DSS mice.
Supplementary Figure legends from PAK1 Promotes Intestinal Tumor Initiation
Authors: Dammann Kyle , Khare Vineeta , Harpain Felix , Lang Michaela , Kurtovic Azra , Mesteri Ildiko , Evstatiev Rayko , Gasche Christoph
Published: April 2023

Figure legends for the supplementary figures 1-4.
Supplementary Figure Legends and Table Legends from Prevention of Carcinogen-Induced Oral Cancer by Sulforaphane
Authors: Bauman Julie E. , Zang Yan , Sen Malabika , Li Changyou , Wang Lin , Egner Patricia A. , Fahey Jed W. , Normolle Daniel P. , Grandis Jennifer R. , Kensler Thomas W. , Johnson Daniel E.
Published: April 2023

Supplementary Figure Legends and Table Legends.
Supplementary Tables from Effects of Adiposity and Exercise on Breast Tissue and Systemic Metabo-Inflammatory Factors in Women at High Risk or Diagnosed with Breast Cancer
Authors: Iyengar Neil M. , Zhou Xi Kathy , Mendieta Hillary , Giri Dilip D. , El-Hely Omar , Winston Lisle , Falcone Domenick J. , Wang Hanhan , Meng Lingsong , Landa Jonathan , Pollak Michael , Kirstein Laurie , Morrow Monica , Dannenberg Andrew J.
Published: April 2023

Supplementary Tables S1, S2, and S3
Figure S1 from Effects of Adiposity and Exercise on Breast Tissue and Systemic Metabo-Inflammatory Factors in Women at High Risk or Diagnosed with Breast Cancer
Authors: Iyengar Neil M. , Zhou Xi Kathy , Mendieta Hillary , Giri Dilip D. , El-Hely Omar , Winston Lisle , Falcone Domenick J. , Wang Hanhan , Meng Lingsong , Landa Jonathan , Pollak Michael , Kirstein Laurie , Morrow Monica , Dannenberg Andrew J.
Published: April 2023

Figure S1. Breast SIRT1 levels correlate with adiposity. SIRT1 expression in the breast inversely correlated with (A) BMI, (B) adipocyte diameter, (C) total fat percentage, and (D) trunk fat percentage.
Supplementary Data from Health Insurance Coverage Mandates: Colorectal Cancer Screening in the Post-ACA Era
Authors: Preston Michael A. , Ross Levi , Chukmaitov Askar , Smith Sharla A. , Odlum Michelle L. , Dahman Bassam , Sheppard Vanessa B.
Published: April 2023

Survey questions
Supplementary Data from Targeting the mTOR Pathway for the Prevention of ER-Negative Breast Cancer
Authors: Mazumdar Abhijit , Tahaney William M. , Hill Jamal L. , Zhang Yun , Ramachandran Sumankalai , Kawedia Jitesh , Qian Jing , Contreras Alejandro , Savage Michelle I. , Vornik Lana A. , Sei Shizuko , Mohammed Altaf , Brown Powel H.
Published: April 2023

Supplementary Data from Targeting the mTOR Pathway for the Prevention of ER-Negative Breast Cancer
Supplemental figure 2 from Cervical Microbiota Associated with Higher Grade Cervical Intraepithelial Neoplasia in Women Infected with High-Risk Human Papillomaviruses
Authors: Piyathilake Chandrika J. , Ollberding Nicholas J. , Kumar Ranjit , Macaluso Maurizio , Alvarez Ronald D. , Morrow Casey D.
Published: April 2023

Supplemental Figure 2. A) LEfSe comparing differentially abundant taxa according to 8-OH status.
Supplementary Table S5 from Chemoprevention with Cyclooxygenase and Epidermal Growth Factor Receptor Inhibitors in Familial Adenomatous Polyposis Patients: mRNA Signatures of Duodenal Neoplasia
Authors: Delker Don A. , Wood Austin C. , Snow Angela K. , Samadder N. Jewel , Samowitz Wade S. , Affolter Kajsa E. , Boucher Kenneth M. , Pappas Lisa M. , Stijleman Inge J. , Kanth Priyanka , Byrne Kathryn R. , Burt Randall W. , Bernard Philip S. , Neklason Deborah W.
Published: April 2023

Ingenuity Pathway Analysis of Inflammation and Immunity Transcriptome panel.
Supplementary Tables 1 through 5 from Relationship of Terminal Duct Lobular Unit Involution of the Breast with Area and Volume Mammographic Densities
Authors: Gierach Gretchen L. , Patel Deesha A. , Pfeiffer Ruth M. , Figueroa Jonine D. , Linville Laura , Papathomas Daphne , Johnson Jason M. , Chicoine Rachael E. , Herschorn Sally D. , Shepherd John A. , Wang Jeff , Malkov Serghei , Vacek Pamela M. , Weaver Donald L. , Fan Bo , Mahmoudzadeh Amir Pasha , Palakal Maya , Xiang Jackie , Oh Hannah , Horne Hisani N. , Sprague Brian L. , Hewitt Stephen M. , Brinton Louise A. , Sherman Mark E.
Published: April 2023

Supplementary Table 1. Spearman partial rank-order correlations for TDLU measures among pre- and postmenopausal women Supplementary Table 2. Spearman partial rank-order correlations between global and peri-lesional volumetric mammographic density measures among pre- and postmenopausal women with benign breast disease Supplementary Tables 3 to 5: Association between TDLU and mammographic density measures (percent, absolute and nondense) among postmenopausal women with benign breast disease
Supplementary Table S3 from Chemoprevention with Cyclooxygenase and Epidermal Growth Factor Receptor Inhibitors in Familial Adenomatous Polyposis Patients: mRNA Signatures of Duodenal Neoplasia
Authors: Delker Don A. , Wood Austin C. , Snow Angela K. , Samadder N. Jewel , Samowitz Wade S. , Affolter Kajsa E. , Boucher Kenneth M. , Pappas Lisa M. , Stijleman Inge J. , Kanth Priyanka , Byrne Kathryn R. , Burt Randall W. , Bernard Philip S. , Neklason Deborah W.
Published: April 2023

Ingenuity Pathway Analysis of total RNASeq analysis. List of pathways identified from IPA analysis, whether they are up or down, using data from the 1.5 fold differential expression list.
Supplemental Figure 5 from Benefits of Multifaceted Chemopreventives in the Suppression of the Oral Squamous Cell Carcinoma (OSCC) Tumorigenic Phenotype
Authors: Mallery Susan R. , Wang Daren , Santiago Brian , Pei Ping , Schwendeman Steven P. , Nieto Kari , Spinney Richard , Tong Meng , Koutras George , Han Brian , Holpuch Andrew , Lang James
Published: April 2023

IHC involucrin staining of representative post treatment tumor tissues.
Supplemental Figure 3 from Benefits of Multifaceted Chemopreventives in the Suppression of the Oral Squamous Cell Carcinoma (OSCC) Tumorigenic Phenotype
Authors: Mallery Susan R. , Wang Daren , Santiago Brian , Pei Ping , Schwendeman Steven P. , Nieto Kari , Spinney Richard , Tong Meng , Koutras George , Han Brian , Holpuch Andrew , Lang James
Published: April 2023

STAT3-DNA binding EMSAs for individual cell lines, BCR-ABL immunoblot 2095sc cells.
Figure S1 Legend from A Phase IIa Trial of Metformin for Colorectal Cancer Risk Reduction among Individuals with History of Colorectal Adenomas and Elevated Body Mass Index
Authors: Zell Jason A. , McLaren Christine E. , Morgan Timothy R. , Lawson Michael J. , Rezk Sherif , Albers C. Gregory , Chen Wen-Pin , Carmichael Joseph C. , Chung Jinah , Richmond Ellen , Rodriguez L.M. , Szabo Eva , Ford Leslie G. , Pollak Michael N. , Meyskens Frank L.
Published: April 2023

legend for supplementary figure 1
Figure S3 from Characteristics of Breast Ducts in Normal-Risk and High-risk Women and Their Relationship to Ductal Cytologic Atypia
Authors: Danforth David N. , Filie Armando C. , Warner Andrew C. , Wright George W. , Sun Zhonghe , Ried Thomas , McGowan Christine T. , Prindiville Sheila A.
Published: April 2023

Figure S3
Table S3 from Genetic Variants in Metabolic Signaling Pathways and Their Interaction with Lifestyle Factors on Breast Cancer Risk: A Random Survival Forest Analysis
Authors: Jung Su Yon , Papp Jeanette C. , Sobel Eric M. , Zhang Zuo-Feng
Published: April 2023

Prediction of genetic variant in genes related to IGF-I/insulin phenotype and signaling pathways
Table S2 from Genetic Variants in Metabolic Signaling Pathways and Their Interaction with Lifestyle Factors on Breast Cancer Risk: A Random Survival Forest Analysis
Authors: Jung Su Yon , Papp Jeanette C. , Sobel Eric M. , Zhang Zuo-Feng
Published: April 2023

Prediction of lifestyle variable using random survival forest model
Figure S1 from Genetic Variants in Metabolic Signaling Pathways and Their Interaction with Lifestyle Factors on Breast Cancer Risk: A Random Survival Forest Analysis
Authors: Jung Su Yon , Papp Jeanette C. , Sobel Eric M. , Zhang Zuo-Feng
Published: April 2023

Flow diagram of analytic cohort
Table S1 from Effect of Antibiotics on Gut and Vaginal Microbiomes Associated with Cervical Cancer Development in Mice
Authors: Karpinets Tatiana V. , Solley Travis N. , Mikkelson Megan D. , Dorta-Estremera Stephanie , Nookala Sita S. , Medrano Andrea Y. Delgado , Petrosino Joseph F. , Mezzari Melissa P. , Zhang Jinghua , Futreal P. Andrew , Sastry K. Jagannadha , Colbert Lauren E. , Klopp Ann
Published: April 2023

OTUs and their normalized abundances in the discovery cohort
Supplementary Figures from Effect of Antibiotics on Gut and Vaginal Microbiomes Associated with Cervical Cancer Development in Mice
Authors: Karpinets Tatiana V. , Solley Travis N. , Mikkelson Megan D. , Dorta-Estremera Stephanie , Nookala Sita S. , Medrano Andrea Y. Delgado , Petrosino Joseph F. , Mezzari Melissa P. , Zhang Jinghua , Futreal P. Andrew , Sastry K. Jagannadha , Colbert Lauren E. , Klopp Ann
Published: April 2023

Supplementary Figures
Supplementary Tables 1-2. from Composite Score of Healthy Lifestyle Factors and the Risk of Pancreatic Cancer in a Prospective Cohort Study
Authors: Luu Hung N. , Paragomi Pedram , Wang Renwei , Jin Aizhen , Brand Randall E. , Koh Woon-Puay , Yuan Jian-Min
Published: April 2023

Supplementary Table 1: Distributions of Baseline Characteristics among Study Participants by Composite Score of Healthy Lifestyle Factors, the Singapore Chinese Health Study; Supplementary Table 2: Association Between Composite Score of Healthy Lifestyle Factors and Risk of Pancreatic Cancer in the Singapore Chinese Health Study, excluding cases and person-years within the first 2 years of observation
Supplementary Table 3 from Immune Responses Vary in Preinvasive Colorectal Lesions by Tumor Location and Histology
Authors: Wallace Kristin , El Nahas Georges J. , Bookhout Christine , Thaxton Jessica E. , Lewin David N. , Nikolaishvili-Feinberg Nana , Cohen Stephanie M. , Brazeal J. Grant , Hill Elizabeth G. , Wu Jennifer D. , Baron John A. , Alekseyenko Alexander V.
Published: April 2023

S. Tab 3: Histologic type analysis
Supplementary Figures from Immune Responses Vary in Preinvasive Colorectal Lesions by Tumor Location and Histology
Authors: Wallace Kristin , El Nahas Georges J. , Bookhout Christine , Thaxton Jessica E. , Lewin David N. , Nikolaishvili-Feinberg Nana , Cohen Stephanie M. , Brazeal J. Grant , Hill Elizabeth G. , Wu Jennifer D. , Baron John A. , Alekseyenko Alexander V.
Published: April 2023

Supplementary Figures 1-3: Representative images of stained lesions
Supplementary Figures S1-S3 from Vaccination with Polyclonal Antibody Stimulator (PAS) Prevents Pancreatic Carcinogenesis in the KRAS Mouse Model
Authors: Smith Jill P. , Cao Hong , Chen Wenqiang , Kallakury Bhaskar , Phillips Teresa , Sutton Lynda , Cato Allen
Published: April 2023

Supplementary Figures: Figure S1. Representative H&E histology of pancreas from LSL-KrasG12D/+; P48-Cre mouse at three months of age shows that PanIN lesions are present at this age when the PASvaccination was initiated. Figure S2. Immunohistochemistry for macrophages in the pancreas extracellular matrix stained with F4/80 (1:40). Figure S3. CCK-B receptor expression in the LSL-KrasG12D/+; P48-Cre mouse pancreas
Supplementary Figure 1 from Toll-like Receptor-6 Signaling Prevents Inflammation and Impacts Composition of the Microbiota During Inflammation-Induced Colorectal Cancer
Authors: Kim Jee-Hyun , Kordahi Melissa C. , Chac Denise , DePaolo R. William
Published: April 2023

Proportion of genus-level bacteria affected by the interaction of housing and genotype
Supplementary Data from Blood Supply of Early Lung Adenocarcinomas in Mice and the Tumor-supplying Vessel Relationship: A Micro-CT Angiography Study
Authors: Deng Lin , Tang Hanzhou , Qiang Jinwei , Wang Jie , Xiao Shiman
Published: April 2023

Supplementary Data
Supplementary Table 3 from Comparison of Performance Between a Short Categorized Lifestyle Exposure-based Colon Cancer Risk Prediction Tool and a Model Using Continuous Measures
Authors: Liu Ying , Colditz Graham A. , Rosner Bernard A. , Dart Hank , Wei Esther , Waters Erika A.
Published: April 2023

Reclassification of predicted risk by two colon cancer risk prediction models among women in the Nurses' Health Study: the model with categorized predictor variables versus the model with continuous predictor variables (reference).
Supplementary Table 2 from Comparison of Performance Between a Short Categorized Lifestyle Exposure-based Colon Cancer Risk Prediction Tool and a Model Using Continuous Measures
Authors: Liu Ying , Colditz Graham A. , Rosner Bernard A. , Dart Hank , Wei Esther , Waters Erika A.
Published: April 2023

Relative risks of colon cancer associated with risk factors modeled as simplified categorical variables and as continuous variables among women in the Nurses' Health Study and men in the Health Professionals Follow-up Study, 1986-2010
Supplementary Table 1S from ERβ Expression and Breast Cancer Risk Prediction for Women with Atypias
Authors: Hieken Tina J. , Carter Jodi M. , Hawse John R. , Hoskin Tanya L. , Bois Melanie , Frost Marlene , Hartmann Lynn C. , Radisky Derek C. , Visscher Daniel W. , Degnim Amy C.
Published: April 2023

ERβ staining in atypical ductal hyperplasia (ADH) versus atypical lobular hyperplasia (ALH).
Supplementary Tables from Prevalence of Aflatoxin-Associated TP53R249S Mutation in Hepatocellular Carcinoma in Hispanics in South Texas
Authors: Jiao Jingjing , Niu Weibo , Wang Ying , Baggerly Keith , Ye Yuanqing , Wu Xifeng , Davenport Dewitt , Almeda Jose Luis , Betancourt-Garcia Monica M. , Forse R. Armour , Stevenson Heather L. , Watt Gordon P. , McCormick Joseph B. , Fisher-Hoch Susan P. , Beretta Laura
Published: April 2023

Supplementary Table S1. Demographic and clinical parameters of the 41 HCC Hispanic patients. Supplementary Table S2. Demographic and clinical parameters of 218 HCC patients. Supplementary Table S3. Genes differentially expressed in HCC tumors with TP53R249S mutation compared to HCC tumors without TP53R249S mutation. Supplementary Table S4. Demographic and clinical characteristic of HCC patients with TP53R249S mutation in TCGA.
Supplementary Table 1 from Preventive Anti-inflammatory Diet to Reduce Gastrointestinal Inflammation in Familial Adenomatous Polyposis Patients: A Prospective Pilot Study
Authors: Belfiore Antonino , Ciniselli Chiara Maura , Signoroni Stefano , Gariboldi Manuela , Mancini Andrea , Rivoltini Licia , Morelli Daniele , Masci Enzo , Bruno Eleonora , Macciotta Alessandra , Ricci Maria Teresa , Daveri Elena , Cattaneo Laura , Gargano Giuliana , Apolone Giovanni , Milione Massimo , Verderio Paolo , Pasanisi Patrizia , Vitellaro Marco
Published: April 2023

Descriptive statistics of the primary and secondary endpoint measurements.
Supplementary Table 1 from A Randomized Controlled Trial Testing Provision of Fecal and Blood Test Options on Participation for Colorectal Cancer Screening
Authors: Symonds Erin L. , Hughes Donna , Flight Ingrid , Woodman Richard , Chen Gang , Ratcliffe Julie , Pedersen Susanne K. , Fraser Robert J.L. , Wilson Carlene J. , Young Graeme P.
Published: April 2023

Demographics of study invitees who requested information about the blood test and who did and did not participate in screening.
Supplementary Data from A Prospective Study of Nut Consumption and Risk of Primary Hepatocellular Carcinoma in the U.S. Women and Men
Authors: Sui Jing , Yang Wanshui , Ma Yanan , Li Tricia Y. , Simon Tracey G. , Meyerhardt Jeffrey A. , Liang Geyu , Giovannucci Edward L. , Chan Andrew T. , Zhang Xuehong
Published: April 2023

Suppl. Tables
Supplementary Figures and Tables from Upper Gastrointestinal Cancer in China: Spatial Epidemiologic Evidence from Screening Areas
Authors: Li Peng , Jing Jing , Li Rui , Ge Miao , Jia Peng , Hu Wenbiao , Qi Xin , Wei Wen-Qiang , Zhuang Guihua
Published: April 2023

Supplementary figures and tables
Supplementary Data from The Effect of Metformin in Treatment of Adenomas in Patients with Familial Adenomatous Polyposis
Authors: Park Jae Jun , Kim Byung Chang , Hong Sung Pil , Seo Yoojeong , Lee Hye Sun , Park Young Sook , Na Soo-Young , Park Sung Chul , Park Jongha , Kim Jae Hak , Moon Chang Mo , Huh Kyu Chan , Park Soo Jung , Cheon Jae Hee , Kim Won Ho , Kim Tae Il
Published: April 2023

Supplementary tables and figures
Supplementary Figure S2 from The Role of Lysosome-associated Membrane Protein 2 in Prostate Cancer Chemopreventive Mechanisms of Sulforaphane
Authors: Hahm Eun-Ryeong , Singh Krishna B. , Kim Su-Hyeong , Powolny Anna A. , Singh Shivendra V.
Published: April 2023

TCGA RNA-Seq data analysis for correlation between expression of LAMP2 and genes affected by SFN treatment in PC-3 cells.
Supplementary Table S2 from Sulforaphane Suppresses the Growth of Triple-negative Breast Cancer Stem-like Cells In vitro and In vivo
Authors: Castro Nadia P. , Rangel Maria C. , Merchant Anand S. , MacKinnon Gabriel , Cuttitta Frank , Salomon David S. , Kim Young S.
Published: April 2023

NanoString nCounter® Stem Cell Gene Expression Codeset showing differentially expressed genes (p < 0.05) between control and sulforaphane-treated groups during primary tumor growth
Supplementary Table S1 from Sulforaphane Suppresses the Growth of Triple-negative Breast Cancer Stem-like Cells In vitro and In vivo
Authors: Castro Nadia P. , Rangel Maria C. , Merchant Anand S. , MacKinnon Gabriel , Cuttitta Frank , Salomon David S. , Kim Young S.
Published: April 2023

Oligonucleotide sequences used for quantitative real-time PCR validation
Supplementary Methods, Supplementary Table 1, Supplementary Table 2 from Plasma 25-Hydroxyvitamin D, Vitamin D Binding Protein, and Risk of Colorectal Cancer in the Nurses' Health Study
Authors: Song Mingyang , Konijeti Gauree Gupta , Yuan Chen , Ananthakrishnan Ashwin N. , Ogino Shuji , Fuchs Charles S. , Giovannucci Edward L. , Ng Kimmie , Chan Andrew T.
Published: April 2023

The Supplementary Methods include further details on "Assessment of dietary and lifestyle factors" and "Statistical analyses". Supplementary Table 1 shows subsite-specific risk of colorectal cancer according to vitamin D-related biomarkers in the Nurses' Health Study (1990-2011). Supplementary Table 2 shows the stratified analysis of the association of plasma total 25(OH)D and VDBP with risk of colorectal cancer in the Nurses' Health Study (1990-2011).
Supplementary Figure from THBS2/CA19-9 Detecting Pancreatic Ductal Adenocarcinoma at Diagnosis Underperforms in Prediagnostic Detection: Implications for Biomarker Advancement
Authors: Udgata Shirsa , Takenaka Naomi , Bamlet William R. , Oberg Ann L. , Yee Stephanie S. , Carpenter Erica L. , Herman Daniel , Kim Jungsun , Petersen Gloria M. , Zaret Kenneth S.
Published: April 2023

Supplementary Figure 1
Table S3 from Simultaneous Measurement of 92 Serum Protein Biomarkers for the Development of a Multiprotein Classifier for Ovarian Cancer Detection
Authors: Skubitz Amy P.N. , Boylan Kristin L.M. , Geschwind Kate , Cao Qing , Starr Timothy K. , Geller Melissa A. , Celestino Joseph , Bast Robert C. , Lu Karen H. , Koopmeiners Joseph S.
Published: April 2023

Supplemental Table S3
Figure S2 from The Discovery and Validation of Biomarkers for the Diagnosis of Esophageal Squamous Dysplasia and Squamous Cell Carcinoma
Authors: Couch George , Redman James E. , Wernisch Lorenz , Newton Richard , Malhotra Shalini , Dawsey Sanford M. , Lao-Sirieix Pierre , Fitzgerald Rebecca C.
Published: April 2023

Cumulative IHC scoring for normal esophagus from ESCC patients (NT) and ESCC (T) matched samples. CCL18 showed no statistical difference in staining between sample groups but TNC was significantly over-expressed in tumour samples (p<0.0002).
Supplementary Tables S1- S6 from Distinct Chemopreventive Effects of Aspirin in Diffuse and Intestinal-Type Gastric Cancer
Authors: Niikura Ryota , Hayakawa Yoku , Hirata Yoshihiro , Konishi Mitsuru , Suzuki Nobumi , Ihara Sozaburo , Yamada Atsuo , Ushiku Tetsuo , Fujishiro Mitsuhiro , Fukayama Masashi , Koike Kazuhiko
Published: April 2023

Supplementary Table 1. Characteristics of gastric cancer patients. Supplementary Table 2. Gastric cancer location, TNM staging in propensity score-matched patients with aspirin. Supplementary Table 3. Associations between the duration of aspirin use and outcomes in patients with aspirin (N = 2082). Supplementary Table 4. Gastric cancer location, TNM staging in propensity score-matched patients with NSAIDs. Supplementary Table 5. Baseline characteristics of unmatched and propensity score-matched patients in PPI-user and non-user groups. Supplementary Table 6. Gastric cancer, intestinal metaplasia, and neutrophil infiltration in propensity score-matched patients with PPI.
Dickinson Supp Figure 1 from Inhibition of Akt Enhances the Chemopreventive Effects of Topical Rapamycin in Mouse Skin
Authors: Dickinson Sally E. , Janda Jaroslav , Criswell Jane , Blohm-Mangone Karen , Olson Erik R. , Liu Zhonglin , Barber Christy , Petricoin Emanuel F. , Calvert Valerie S. , Einspahr Janine , Dickinson Jesse E. , Stratton Steven P. , Curiel-Lewandrowski Clara , Saboda Kathylynn , Hu Chengcheng , Bode Ann M. , Dong Zigang , Alberts David S. , Timothy Bowden G.
Published: April 2023

Schema representing UV-induced signaling, rapamycin and PHT-427-regulated pathways in keratinocytes.
Supplementary Table 5 from Prevention of Colorectal Carcinogenesis by DNA-Binding Small-Molecule Curaxin CBL0137 Involves Suppression of Wnt Signaling
Authors: Kirsanov Kirill , Fetisov Timur , Lesovaya Ekaterina A. , Maksimova Varvara , Trukhanova Lubov , Antoshina Elena , Gor'kova Tatiana , Morozova Olga , Safina Alfiya , Fleyshman Daria , Salimov Ramiz , Shipaeva Elena , Ivanov Roman , Leonov Andrey , Purmal Andrei A. , Belitsky Gennady A. , Gudkov Andrei V. , Gurova Katerina V. , Yakubovskaya Marianna G.
Published: April 2023

Supplemental Table 5
Conflict of Interest Form from Inflammation-Related IL1β/IL1R Signaling Promotes the Development of Asbestos-Induced Malignant Mesothelioma
Authors: Kadariya Yuwaraj , Menges Craig W. , Talarchek Jacqueline , Cai Kathy Q. , Klein-Szanto Andres J. , Pietrofesa Ralph A. , Christofidou-Solomidou Melpo , Cheung Mitchell , Mossman Brooke T. , Shukla Arti , Testa Joseph R.
Published: April 2023

Conflict of Interest Form from Inflammation-Related IL1β/IL1R Signaling Promotes the Development of Asbestos-Induced Malignant Mesothelioma
Supplementary Table and Figure from Risk of Skin Cancer Associated with Metformin Use: A Meta-Analysis of Randomized Controlled Trials and Observational Studies
Authors: Chang Michael S. , Hartman Rebecca I. , Xue Junchao , Giovannucci Edward L. , Nan Hongmei , Yang Keming
Published: April 2023

Table S1, FigS1
Supplementary Legends from Risk of Skin Cancer Associated with Metformin Use: A Meta-Analysis of Randomized Controlled Trials and Observational Studies
Authors: Chang Michael S. , Hartman Rebecca I. , Xue Junchao , Giovannucci Edward L. , Nan Hongmei , Yang Keming
Published: April 2023

Legends for Supplementary Figure and Table
Suppl Fig S1 from Analysis of Immune Cells from Human Mammary Ductal Epithelial Organoids Reveals Vδ2+ T Cells That Efficiently Target Breast Carcinoma Cells in the Presence of Bisphosphonate
Authors: Zumwalde Nicholas A. , Haag Jill D. , Sharma Deepak , Mirrielees Jennifer A. , Wilke Lee G. , Gould Michael N. , Gumperz Jenny E.
Published: April 2023

Flow cytometric analysis to provide further verification that EpCAM+ cells from organoid preps are epithelial cells.
Supplementary Table 6 from Physical Activity and Long-term Quality of Life among Colorectal Cancer Survivors—A Population-based Prospective Study
Authors: Eyl Ruth Elisa , Koch-Gallenkamp Lena , Jansen Lina , Walter Viola , Carr Prudence R. , Hoffmeister Michael , Chang-Claude Jenny , Brenner Hermann , Arndt Volker
Published: April 2023

Supplementary Table 6
Figure S1 from IKZF1 Gene in Childhood B-cell Precursor Acute Lymphoblastic Leukemia: Interplay between Genetic Susceptibility and Somatic Abnormalities
Authors: Lopes Bruno A. , Barbosa Thayana C. , Souza Bruna K.S. , Poubel Caroline P. , Pombo-de-Oliveira Maria S. , Emerenciano Mariana
Published: April 2023

S1. The relationship between IKZF1 expression, IKZF1 SNPs and patient characteristics.
Tables S1, S2 and S3 from Risk of Prostate Cancer–related Death Following a Low PSA Level in the PLCO Trial
Authors: Landy Rebecca , Houghton Lauren C. , Berg Christine D. , Grubb Robert L. , Katki Hormuzd A. , Black Amanda
Published: April 2023

Table S1: Demographics and baseline PSA Levels by Age; Table S2: Demographics and baseline PSA Levels by Race/Ethnicity; Table S3: Cumulative incidence of prostate cancer and aggressive disease at 2, 5, and 10 years, and prostate cancer mortality, for men with baseline PSA {less than or equal to}1 ng/ml, by age
Supplementary Tables from Predicting Progression of Low-Grade Oral Dysplasia Using Brushing-Based DNA Ploidy and Chromatin Organization Analysis
Authors: Datta Madhurima , Laronde Denise M. , Rosin Miriam P. , Zhang Lewei , Chan Bertrand , Guillaud Martial
Published: April 2023

Supplementary Tables 1, 2, 3: Table 1: Nuclear morphometric and texture features as calculated by the Getafics scanner (FB6 feature set description, Alexei Doudkine and Calum MacAulay, January 15, 1998). Table 2: Sample breakdown based on biopsy diagnosis and progression. Table 3: Comparison of high-risk and low-risk DNA brushing classification according to demographic, risk habit and lesion clinical features.
Supplementary Figure 1 Legend from Obesity-Associated Alterations in Inflammation, Epigenetics, and Mammary Tumor Growth Persist in Formerly Obese Mice
Authors: Rossi Emily L. , de Angel Rebecca E. , Bowers Laura W. , Khatib Subreen A. , Smith Laura A. , Van Buren Eric , Bhardwaj Priya , Giri Dilip , Estecio Marcos R. , Troester Melissa A. , Hair Brionna Y. , Kirk Erin L. , Gong Ting , Shen Jianjun , Dannenberg Andrew J. , Hursting Stephen D.
Published: April 2023

Supplementary Figure 1 Legend.
Supplementary Data from Periodontal Disease, Tooth Loss, and Risk of Serrated Polyps and Conventional Adenomas
Authors: Lo Chun-Han , Nguyen Long H. , Wu Kana , Ogino Shuji , Chan Andrew T. , Giovannucci Edward L. , Song Mingyang
Published: April 2023

Figure S1, Figure S2, Table S1, Table S2, Table S3, Table S4
Table 2S. from Comparison between Urine and Cervical Samples for HPV DNA Detection and Typing in Young Women in Colombia
Authors: Cómbita Alba Lucía , Gheit Tarik , González Paula , Puerto Devi , Murillo Raúl Hernando , Montoya Luisa , Vorsters Alex , Van Keer Severien , Van Damme Pierre , Tommasino Massimo , Hernández-Suárez Gustavo , Sánchez Laura , Herrero Rolando , Wiesner Carolina
Published: April 2023

Prevalence of HPV infection in cervical and urine samples according to cytological results in young women aged 18-25 years from Soacha and Manizales, Colombia.
Figure 1S. from Comparison between Urine and Cervical Samples for HPV DNA Detection and Typing in Young Women in Colombia
Authors: Cómbita Alba Lucía , Gheit Tarik , González Paula , Puerto Devi , Murillo Raúl Hernando , Montoya Luisa , Vorsters Alex , Van Keer Severien , Van Damme Pierre , Tommasino Massimo , Hernández-Suárez Gustavo , Sánchez Laura , Herrero Rolando , Wiesner Carolina
Published: April 2023

Number of HPV types in cervical and urine samples.
Supplementary Figure and Table Legends from Using Digital Pathology to Understand Epithelial Characteristics of Benign Breast Disease among Women Undergoing Diagnostic Image-Guided Breast Biopsy
Authors: Mullooly Maeve , Puvanesarajah Samantha , Fan Shaoqi , Pfeiffer Ruth M. , Olsson Linnea T. , Hada Manila , Kirk Erin L. , Vacek Pamela M. , Weaver Donald L. , Shepherd John , Mahmoudzadeh Amir , Wang Jeff , Malkov Serghei , Johnson Jason M. , Hewitt Stephen M. , Herschorn Sally D. , Sherman Mark E. , Troester Melissa A. , Gierach Gretchen L.
Published: April 2023

Legends for supplementary figures and tables.
Supplementary Figure 2 from Using Digital Pathology to Understand Epithelial Characteristics of Benign Breast Disease among Women Undergoing Diagnostic Image-Guided Breast Biopsy
Authors: Mullooly Maeve , Puvanesarajah Samantha , Fan Shaoqi , Pfeiffer Ruth M. , Olsson Linnea T. , Hada Manila , Kirk Erin L. , Vacek Pamela M. , Weaver Donald L. , Shepherd John , Mahmoudzadeh Amir , Wang Jeff , Malkov Serghei , Johnson Jason M. , Hewitt Stephen M. , Herschorn Sally D. , Sherman Mark E. , Troester Melissa A. , Gierach Gretchen L.
Published: April 2023

Supplementary Figure 2
Supplementary Table 2 from Colonoscopy and Sigmoidoscopy Use among the Average-Risk Population for Colorectal Cancer: A Systematic Review and Trend Analysis
Authors: Cardoso Rafael , Niedermaier Tobias , Chen Chen , Hoffmeister Michael , Brenner Hermann
Published: April 2023

In Supplementary Table 2 prevalence estimates of colonoscopy use by age and sex in 2010 and 2015 in the US are presented.
Supplementary Table from Saliva and Lung Microbiome Associations with Electronic Cigarette Use and Smoking
Authors: Ying Kevin L. , Brasky Theodore M. , Freudenheim Jo L. , McElroy Joseph P. , Nickerson Quentin A. , Song Min-Ae , Weng Daniel Y. , Wewers Mark D. , Whiteman Noah B. , Mathe Ewy A. , Shields Peter G.
Published: April 2023

Supplementary Table from Saliva and Lung Microbiome Associations with Electronic Cigarette Use and Smoking
Supplementary Data from Association Between Aspirin Use and Gastric Adenocarcinoma: A Prospective Cohort Study
Authors: Kwon Sohee , Ma Wenjie , Drew David A. , Klempner Samuel J. , Leonardo Brianna M. , Flynn Jacqueline J. , Cao Yin , Giovannucci Edward L. , Bao Ying , Fuchs Charles S. , Song Mingyang , Chan Andrew T.
Published: April 2023

Supplementary Data from Association Between Aspirin Use and Gastric Adenocarcinoma: A Prospective Cohort Study
S Figure 2 from Physical Activity Plus Energy Restriction Prevents 4T1.2 Mammary Tumor Progression, MDSC Accumulation, and an Immunosuppressive Tumor Microenvironment
Authors: Turbitt William J. , Xu Yitong , Sosnoski Donna M. , Collins Shawntawnee D. , Meng Huicui , Mastro Andrea M. , Rogers Connie J.
Published: April 2023

tumor immune infitrates
S Figure 1 from Physical Activity Plus Energy Restriction Prevents 4T1.2 Mammary Tumor Progression, MDSC Accumulation, and an Immunosuppressive Tumor Microenvironment
Authors: Turbitt William J. , Xu Yitong , Sosnoski Donna M. , Collins Shawntawnee D. , Meng Huicui , Mastro Andrea M. , Rogers Connie J.
Published: April 2023

splenic B cells and F480 macrophages at days 7,14,21,28 and 35 post tumor implantation
Supplemental Table S1 from Effect of Green Tea Supplements on Liver Enzyme Elevation: Results from a Randomized Intervention Study in the United States
Authors: Yu Zheming , Samavat Hamed , Dostal Allison M. , Wang Renwei , Torkelson Carolyn J. , Yang Chung S. , Butler Lesley M. , Kensler Thomas W. , Wu Anna H. , Kurzer Mindy S. , Yuan Jian-Min
Published: April 2023

Supplemental Table S1 shows the severity grading in Drug Induced Liver Injury from LIVERTOX produced by AIDS CTG.
Supplementary Tables from Effects of Walnut Consumption on Colon Carcinogenesis and Microbial Community Structure
Authors: Nakanishi Masako , Chen Yanfei , Qendro Veneta , Miyamoto Shingo , Weinstock Erica , Weinstock George M. , Rosenberg Daniel W.
Published: April 2023

Macronutrient and fatty acid composition of the AIN-76A and TWD diets.
Supplemental Figure S3 from Dietary Methyl Donor Depletion Suppresses Intestinal Adenoma Development
Authors: Hanley Matthew P. , Kadaveru Krishna , Perret Christine , Giardina Charles , Rosenberg Daniel W.
Published: April 2023

Supplemental Figure S3. Body weight changes in ApcÎ"14/+ mice. Body weights of mice in each experimental group were recorded weekly throughout the study; each point represents average body weight {plus minus} SEM. At the end of the study, weights of mice in groups 2 (MDS pair fed) and 3 (MDD) were reduced by approximately 45%. Mice in group 4 (MDD:MDS) initially failed to gain weight and at the time of transfer to MDS diet (15 weeks of age) weighed approximately 33% less than group 1 (MDS ad lib.) mice. However, following methyl donor repletion with the MDS diet, group 4 mice rapidly gained weight and had returned to a normal body weight by the end of the study. Error bars indicate means {plus minus} SEM.
Supplemental Figure S2 from Dietary Methyl Donor Depletion Suppresses Intestinal Adenoma Development
Authors: Hanley Matthew P. , Kadaveru Krishna , Perret Christine , Giardina Charles , Rosenberg Daniel W.
Published: April 2023

Figure S2. Immunohistochemistry for cleaved caspase-3 (CC3) in normal and tumor tissue from the small intestine. (A) Representative images of CC3 staining in tumors of the small intestine, with quantification. Caloric restriction (MDS pair fed) and MDD caused 2-fold (P<0.01) and 3.1-fold (P<0.01) increases in apoptotic index, respectively. Apoptotic cells were scattered throughout the tumor with no obvious localization. (B) Representative images of PHH3 staining in tumors, with quantification. Tumor mitotic index was calculated by averaging the number of PHH3+ cells in 10 40x microscope fields; MDD caused a large reduction (81%, P<0.01) in tumor mitotic index. Mitotic index was also reduced in tumors from MDD:MDS mice (31%, P<0.05), indicating that mitotic inhibition in tumors persists, to a lesser degree, at least 7 weeks beyond methyl donor repletion. Bars indicate means {plus minus} SEM. Statistically significant differences (P<0.05) between groups, measured by ANOVA with Bonferroni's post-test, are indicated within bar graphs by differences in the letter placed above each group. Scale bars, 120 Âµm.
Supplemental Figure S1 from Dietary Methyl Donor Depletion Suppresses Intestinal Adenoma Development
Authors: Hanley Matthew P. , Kadaveru Krishna , Perret Christine , Giardina Charles , Rosenberg Daniel W.
Published: April 2023

Supplemental Figure S1. Immunohistochemistry for Ki-67 in normal crypts and tumors of the small intestine. (A) Representative images of Ki-67 staining in normal crypts, with quantification. MDD caused a small reduction (12%, P<0.01) in the average percentage of Ki-67+ cells per crypt. MDD:MDS mice exhibited a small (6%, P<0.01), but significant, reduction in the average percentage of Ki-67+ cells per crypt, possibly indicating that MDD-induced inhibition of proliferation persists during methyl donor repletion in normal crypts. (B) Representative images of Ki-67 staining in tumors, with quantification. Tumor proliferative index was determined by calculating the average percentage of Ki-67+ cells in 5 40x fields per mouse (minimum 2000 cells counted). MDD induced a modest reduction (17%, P<0.01) in proliferative index in tumors of the small intestine. There was no reduction in proliferative index in tumors from MDD:MDS mice, indicating that MDD-induced reductions in proliferation are reversed by repletion with MDS diet. Bars indicate means {plus minus} SEM. Statistically significant differences.(P<0.05) between groups, measured by ANOVA with Bonferroni's post-test, are indicated within bar graphs by differences in the letter placed above each group. Scale bars, 80 and 200 Âµm.
Supplementary Data from Epigenome-Wide Study Identifies Epigenetic Outliers in Normal Mucosa of Patients with Colorectal Cancer
Authors: Ghosh Jayashri , Schultz Bryant M. , Chan Joe , Wultsch Claudia , Singh Rajveer , Shureiqi Imad , Chow Stephanie , Doymaz Ahmet , Varriano Sophia , Driscoll Melissa , Muse Jennifer , Kleiman Frida E. , Krampis Konstantinos , Issa Jean-Pierre J. , Sapienza Carmen
Published: April 2023

Supplementary Data from Epigenome-Wide Study Identifies Epigenetic Outliers in Normal Mucosa of Patients with Colorectal Cancer
Data from Determinants of Lung Cancer Screening in a Minnesota Urban Indigenous Community: A Community-Based, Participatory, Action-Oriented Study
Authors: Anderson Madison D. , Pickner Wyatt J. , Begnaud Abbie
Published: April 2023

Abstract
Although lung cancer screening (LCS) with annual low-dose chest CT has been shown to reduce lung cancer deaths, it remains underutilized. Northern Plains American Indian and Alaska Native (AI/AN) communities experience extreme lung cancer disparities, and little is known about the acceptance and adoption of LCS in these groups. We conducted interviews with healthcare professionals and focus groups with patients in an urban Minnesota community clinic serving AI/AN. Data collection took place during winter 2019–2020. Indigenous researchers collected and analyzed the data for emergent themes using simultaneous collaborative consensus with a LCS researcher. Participants reported some similar barriers to LCS as previous studies reported but also shared some new insights into traditional ways of knowing and recommendations for effectively implementing this evidence-based preventive care service. Lung screening is largely acceptable to patients and healthcare personnel in an AI/AN–serving community clinic. We identified barriers as previously reported in other populations but also identified some unique barriers and motivators. For example, the concept of the seven generations may provide motivation to maintain one's health for future generations while providing additional support during screening for persons traumatized by the Western medicine health system may facilitate increased screening uptake.
Prevention Relevance:
Secondary prevention of lung cancer through screening is potentially lifesaving considering that overall survival of lung cancer is 20% at 5 years but curable if detected at an early stage. This work provides insight into culturally tailored approaches to implementing the service in individuals at high risk of the disease.
Supplementary Figure S7 from Bone Marrow–Derived Gr1+ Cells Can Generate a Metastasis-Resistant Microenvironment Via Induced Secretion of Thrombospondin-1
Authors: Catena Raúl , Bhattacharya Nandita , El Rayes Tina , Wang Suming , Choi Hyejin , Gao Dingcheng , Ryu Seongho , Joshi Natasha , Bielenberg Diane , Lee Sharrell B. , Haukaas Svein A. , Gravdal Karsten , Halvorsen Ole J. , Akslen Lars A. , Watnick Randolph S. , Mittal Vivek
Published: April 2023

Supplementary Figure S7 - PDF file 58K, The seeding of tumor cells in the lungs is similar in Tsp1-/- BMT mice and WT BMT mice
Supplementary Figure S13 from Bone Marrow–Derived Gr1+ Cells Can Generate a Metastasis-Resistant Microenvironment Via Induced Secretion of Thrombospondin-1
Authors: Catena Raúl , Bhattacharya Nandita , El Rayes Tina , Wang Suming , Choi Hyejin , Gao Dingcheng , Ryu Seongho , Joshi Natasha , Bielenberg Diane , Lee Sharrell B. , Haukaas Svein A. , Gravdal Karsten , Halvorsen Ole J. , Akslen Lars A. , Watnick Randolph S. , Mittal Vivek
Published: April 2023

Supplementary Figure S13 - PDF file 124K, Representative immunofluorescence images showing Tsp-1 expression in BMderived Gr1+ cells in the lungs of DWLPK peptide-treated WT BMT mice
Supplementary Methods from miR-23a Promotes the Transition from Indolent to Invasive Colorectal Cancer
Authors: Jahid Sohail , Sun Jian , Edwards Robert A. , Dizon Diana , Panarelli Nicole C. , Milsom Jeffrey W. , Sikandar Shaheen S. , Gümüş Zeynep H. , Lipkin Steven M.
Published: April 2023

PDF file - 58K, Table of antibodies used in the study.
Supplementary Figures 1-9 from miR-23a Promotes the Transition from Indolent to Invasive Colorectal Cancer
Authors: Jahid Sohail , Sun Jian , Edwards Robert A. , Dizon Diana , Panarelli Nicole C. , Milsom Jeffrey W. , Sikandar Shaheen S. , Gümüş Zeynep H. , Lipkin Steven M.
Published: April 2023

PDF file - 618K
Supplementary Tables 1-12 from SF3B1 Mutations Are Associated with Alternative Splicing in Uveal Melanoma
Authors: Furney Simon J. , Pedersen Malin , Gentien David , Dumont Amaury G. , Rapinat Audrey , Desjardins Laurence , Turajlic Samra , Piperno-Neumann Sophie , de la Grange Pierre , Roman-Roman Sergio , Stern Marc-Henri , Marais Richard
Published: April 2023

Supplementary Tables 1-12 - XLSX file 156K, This file contains Supplementary Tables 1-12. Supplementary Table 1. Clinical information of 12 patients in discovery cohort. Supplementary Table 2. Whole genome sequnecing coverage of uveal melanoma samples. Supplementary Table 3. Ploidy and tumor fraction in uveal melanoma samples. Supplementary Table 4. Predicted somatic structural variants identified by WGS. Supplementary Table 5. List of nonsynonymous mutations in uveal melanoma samples. Supplementary Table 6.. Recurrent mutations / events in uveal melanoma Supplementary Table 7. Clinical features of extension cohort patients. Supplementary Table 8. Effects of SF3B1 mutations on gene expression. Supplementary Table 9. Effects of SF3B1 mutations on exon usage. Supplementary Table 10. The effects of SF3B1 mutations on alternative splicing 1: DEXSeq analysis. Supplementary Table 11. The effects of SF3B1 mutations on alternative splicing 2: MATS analysis. Supplementary Table 12. Primers for qRT-PCR validations
Supplementary Figures 1-8, Tables 1-9 from Functional Viability Profiles of Breast Cancer
Authors: Brough Rachel , Frankum Jessica R. , Sims David , Mackay Alan , Mendes-Pereira Ana M. , Bajrami Ilirjana , Costa-Cabral Sara , Rafiq Rumana , Ahmad Amar S. , Cerone Maria Antonietta , Natrajan Rachael , Sharpe Rachel , Shiu Kai-Keen , Wetterskog Daniel , Dedes Konstantine J. , Lambros Maryou B. , Rawjee Teeara , Linardopoulos Spiros , Reis-Filho Jorge S. , Turner Nicholas C. , Lord Christopher J. , Ashworth Alan
Published: April 2023

PDF file - 3567K
Supplementary Figure 6 from Identification of Luminal Breast Cancers That Establish a Tumor-Supportive Macroenvironment Defined by Proangiogenic Platelets and Bone Marrow–Derived Cells
Authors: Kuznetsov Hanna S. , Marsh Timothy , Markens Beth A. , Castaño Zafira , Greene-Colozzi April , Hay Samantha A. , Brown Victoria E. , Richardson Andrea L. , Signoretti Sabina , Battinelli Elisabeth M. , McAllister Sandra S.
Published: April 2023

PDF file - 319K, Tumor specimens from women with luminal breast cancer used to identify instigators, non-instigators, or responders in the systemic instigation xenograft model