bluuebunny/crossref_metadata_2025 huggingface dataset:
Thermodynamic framework for design of reaction rate equations and schemes
Authors: Pekař Miloslav
Published: September 2009

It has been shown previously that rational thermodynamics provides general foundations of mass-action kinetic law from the principles of continuum, irreversible thermodynamics. Practical outcomes of this phenomenological theory are analyzed and compared with traditional kinetic approaches on the example of N2O decomposition. It is revealed that classical rate equations are only simplified forms of a polynomial approximation to a general rate function proved by the continuum thermodynamics. It is also shown that various special considerations that have been introduced formerly as additional hypothesis to satisfactorily describe experimental data are naturally included in the thermodynamic approach. The method, in addition, makes it possible to obtain more general mass-action-type rate equations that give better description of experimental data than the traditional ones. The method even reverses the classical kinetic paradigm – reaction scheme directly follows from the rate equation. Data fitting by this method also indicates connections to distinctions between processes at the molecular level and their representation by some macroscopic reaction network. The role of dependent and independent reactions in reaction kinetics and reaction schemes is clarified. A selected example demonstrates that this thermodynamic methodology may improve our design and understanding of thermodynamically and mathematically necessary and sufficient reaction schemes. The phenomenological theory thus sheds new, “thermodynamic” light on what has been and is done by generations of kineticists and gives new hints how to do it in a way consistent with non-equilibrium thermodynamics.
An error of self-diagnosis—but what was the real diagnosis?
Authors: de Carvalho Mamede , Swash Michael
Published: September 2009

The availability of information on the internet encourages people to explore their own diagnosis. Although more knowledge is usually a good thing, self-diagnosis in this way may not always be correct, and it can even adversely influence the medical diagnosis, as in this patient, where the underlying disorder is still uncertain. The patient illustrates the confusion and difficulty in categorising an usual clinical syndrome.
Reversible cerebral vasoconstriction syndrome
Authors: Ducros Anne , Bousser Marie-Germaine
Published: September 2009

Reversible cerebral vasoconstriction syndrome is characterised by severe headaches with or without seizures and focal neurological deficits, and constriction of cerebral arteries which resolves spontaneously in 1–3 months. It affects females slightly more than males, and mean age of onset is around 45 years. Approximately 60% of cases are secondary, mainly postpartum and after exposure to vasoactive substances. The major complications are localised cortical subarachnoid haemorrhage (22%) and parenchymal ischaemic or haemorrhagic strokes (7%) which may leave permanent sequelae. Diagnosis requires the demonstration of the “string of beads” appearance of cerebral arteries on angiography, with complete or almost complete resolution on repeat angiography 12 weeks after onset. Nimodipine seems to reduce thunderclap headaches within 48 h but has no definite effect on the haemorrhagic and ischaemic complications.
Volcanic reconstruction of Paleoproterozoic arc volcanoes: the Hidden and Louis formations, Flin Flon, Manitoba, CanadaThis is a companion paper to DeWolfe, Y.M., Gibson, H.L., and Piercey, S.J. 2009. Petrogenesis of the 1.9 Ga mafic hanging wall sequence to the Flin Flon, Callinan, and Triple 7 massive sulphide deposits, Flin Flon, Manitoba, Canada. Canadian Journal of Earth Sciences, 46: this issue.
Authors: DeWolfe Y. M. , Gibson H. L. , Lafrance B. , Bailes A. H.
Published: September 2009

The hanging wall to the Flin Flon, Callinan, and Triple 7 volcanogenic massive sulphide deposits of the Flin Flon district is composed of the Hidden and Louis formations. The contact between these formations is marked by mafic tuff that represents a hiatus in effusive volcanism. The formations form a composite volcanic edifice that was erupted and grew within a large, volcanic–tectonic subsidence structure (hosting the deposits) that developed within a rifted-arc environment. The formations are evidence of resurgent effusive volcanism and subsidence following a hiatus in volcanism marked by ore formation since they consist of dominantly basaltic flows, sills, and volcaniclastic rocks with subordinate basaltic andesite and rhyodacitic flows and volcaniclastic rocks. The Hidden formation is interpreted to represent a small shield volcano and the Louis formation a separate shield volcano that developed on its flank. Both the Hidden and Louis volcanic edifices were constructed by continuous, low-volume eruptions of pillow lava. A gradual change from a dominantly extensional environment during the formation of the footwall Flin Flon formation to a progressively more dominant convergent environment during the emplacement of the hanging wall suggests that the Hidden and Louis formations are unlikely to host significant volcanogenic massive sulphide-type mineralization. However, synvolcanic structures in the formations define structural corridors that project downwards into the footwall where they encompass massive sulphide mineralization, indicating their control on ore formation, longevity,and reactivation as magma and fluid pathways during the growth of the Hidden and Louis volcanoes.
Petrogenesis of the 1.9 Ga mafic hanging wall sequence to the Flin Flon, Callinan, and Triple 7 massive sulphide deposits, Flin Flon, Manitoba, CanadaThis is a companion paper to DeWolfe, Y.M., Gibson, H.L., Lafrance , B., and Bailes, A.H. 2009. Volcanic reconstruction of Paleoproterozoic arc volcanoes: the Hidden and Louis formations, Flin Flon, Manitoba, Canada. Canadian Journal of Earth Sciences, 46: this issue.
Authors: DeWolfe Y. M. , Gibson H. L. , Piercey S. J.
Published: September 2009

A detailed study of the geochemical and isotopic characteristics of the volcanic rocks of the Hidden and Louis formations, which make up the hanging wall to the volcanogenic massive sulphide deposits at Flin Flon, Manitoba, was carried out on a stratigraphically controlled set of samples. The stratigraphy consists of the lowermost, dominantly basaltic, Hidden formation, and the overlying, dominantly basaltic, Louis formation. Of importance petrogenetically, is the 1920 unit a basaltic andesite with Nb/Thmn = 0.54–0.62, εNd(1.9Ga) = +3.6–+5.9, εHf(1.9Ga) = +8.5–+9.6, and 204Pb/206Pb = 23.9. The basaltic flows that dominate the Hidden formation have Nb/Thmn = 0.16–0.29, εNd(1.9Ga) = +1.7–+4.4, εHf(1.9Ga) = +7.0–+11.8 and 204Pb/206Pb = 16.9–18.6). The Carlisle Lake basaltic–andesite (top of Hidden formation) is characterized by Nb/Thmn = 0.16–0.14, and 204Pb/206Pb = 21.4. The rhyodacitic Tower member (bottom of Louis formation) has Nb/Thmn = 0.23, εNd1.9Ga = +4.6, εHf1.9Ga = +9.3, and 204Pb/206Pb = 22.2. The basaltic flows that dominate the Louis formation have Nb/Thmn = 0.18–0.25, εNd(1.9Ga) = +3.6–+4.2, εHf(1.9Ga) = +8.4–+11.3 and 204Pb/206Pb = 17.9. The Hidden and Louis formations show dominantly transitional arc tholeiite signatures, with the 1920 unit having arc tholeiite characteristics. It is interpreted to have formed through extensive fractional crystallization of differentiated magmas at shallow levels in oceanic crust. Given the geological, geochemical, and isotopic characteristics of the Hidden and Louis formations, they are interpreted to represent subducted slab metasomatism with minor contamination from subducted sediments.
A new tomistomine (Crocodylia) from the Miocene of Taiwan
Authors: Shan Hsi-yin , Wu Xiao-chun , Cheng Yen-nien , Sato Tamaki
Published: September 2009

Penghusuchus pani gen. et sp. nov. is described on the basis of a skeleton from the upper Miocene of Penghu Island. It is the most complete vertebrate fossil from Taiwan. Penghusuchus pani is distinguished from other tomistomines mainly in features of the skull and mandible. The most diagnostic characters for the taxon are that the prefrontal and anterior process of the jugal extend as anteriorly as the lacrimal does; the seventh maxillary tooth is the largest; the choana is sharply triangular in outline; and the floor of the nasopharyngeal canal and choanal borders strongly drop downward to form a Y-shaped prominence on the ventral surface of the pterygoids. Our phylogenetic analysis indicates that the new form is closely related to two other Asian fossil tomistomines, Tomistoma petrolica from southeastern China and Toyotamaphimeia machikanensis from Japan. The discovery of P. pani certainly enriches our knowledge of the paleogeography and the phylogenetic relationships amongst tomistomines.
Early Pliocene fish remains from Arctic Canada support a pre-Pleistocene dispersal of percids (Teleostei: Perciformes)
Authors: Murray Alison M. , Cumbaa Stephen L. , Harington C. Richard , Smith Gerald R. , Rybczynski Natalia
Published: September 2009

Percid remains from Pliocene deposits on Ellesmere Island, Arctic Canada, are identified as a species of Sander , similar to the walleye and sauger of North America and the pike–perch of Europe and western Asia. They are named as a new species, Sander teneri . These remains are the most northerly percid elements found to date and suggest the palaeoenvironment was significantly warmer in the Pliocene than it is currently. The fossil remains show the presence in North America of the family Percidae as well as the genus Sander prior to the Pleistocene, indicating a previously proposed Pleistocene immigration from Europe or Asia can be discounted. These fossils contradict an earlier hypothesis that percids, in particular Sander, crossed from Eurasia to North America in the Pleistocene; instead, the fossils show percids were already in the area by the Pliocene.
Relationship between bruchid resistance and seed mass in mungbean based on QTL analysis
Authors: Mei L. , Cheng X. Z. , Wang S. H. , Wang L. X. , Liu C. Y. , Sun L. , Xu N. , Humphry M. E. , Lambrides C. J. , Li H. B. , Liu C. J.
Published: September 2009

Bruchids (Coleoptera: Bruchidae) can cause serious damage to mungbean and several other leguminous crops and there is a strong association between small seed size and bruchid resistance. In investigating the feasibility of breeding large-seeded cultivars with high levels of bruchid resistance, we studied the relationship between these two traits by QTL analysis. A major locus conferring resistance to Callosobruchus chinensis was identified from a wild mungbean genotype, ‘ACC41’ (belonging to Vigna radiata var. sublobata), collected in Australia. The proportion of the C. chinensis resistance response that could be attributed to this single QTL varied among four different resistance assays. The highest value reached was 98.5%, suggesting that bruchid resistance in this genotype is likely conditioned by this single locus. The QTL was robust and its detection was not affected by the use of different sources of the insect, different lengths and conditions of seed storage, or different bruchid resistance assay methods. This bruchid resistance QTL was coincident with one of the loci conferring seed mass detected from the three seed sources produced in Australia. However, such a co-location was not detected for the seed source produced in China. Covariance analysis revealed a complex relationship between seed mass and bruchid resistance. Nevertheless, the effect of the bruchid resistance QTL remained highly significant for all four assays after the effect of seed mass was accounted for. These results, together with the relationship between the bruchid resistance QTL identified in this study and a second one detected previously in a wild mungbean genotype from Madagascar, are discussed.
Histone genes of the razor clamSolen marginatusunveil new aspects of linker histone evolution in protostomes
Authors: González-Romero Rodrigo , Ausió Juan , Méndez Josefina , Eirín-López José M.
Published: September 2009

The association of DNA with histones results in a nucleoprotein complex called chromatin that consists of repetitive nucleosomal subunits. Nucleosomes are joined together in the chromatin fiber by short stretches of linker DNA that interact with a wide diversity of linker H1 histones involved in chromatin compaction and dynamics. Although the long-term evolution of the H1 family has been the subject of different studies during the last 5 years, the lack of molecular data on replication-independent (RI) H1 variants from protostomes has been hampering attempts to complete the evolutionary picture of this histone family in eukaryotes, especially as it pertains to the functional specialization they impart to the chromatin structure in members of this bilaterian lineage. In an attempt to fill this gap, the present work characterizes the histone gene complement from the razor clam Solen marginatus . Molecular evolutionary analyses reveal that the H1 gene from this organism represents one of the few protostome RI H1 genes known to date, a notion which is further supported by its location within the monophyletic group encompassing the RI H1 variants in the overall phylogeny of eukaryotic H1 proteins. Although the detailed characterization of the nucleotide substitution patterns in RI H1 variants agrees with the model of birth-and-death evolution under strong purifying selection, maximum-likelihood approaches unveil the presence of adaptive selection during at least part of the evolutionary differentiation between protostomes and deuterostomes. The presence of increased levels of specialization in RI H1 proteins from deuterostomes as well as the significant differences observed in electrostatic properties between protostome and deuterostome RI H1s represent novel and important preliminary results for future studies of the functional differentiation of this histone H1 lineage across bilaterians.
Comparative analysis of theBrassica oleraceagenetic map and theArabidopsis thalianagenome
Authors: Kaczmarek Malgorzata , Koczyk Grzegorz , Ziolkowski Piotr A. , Babula-Skowronska Danuta , Sadowski Jan
Published: September 2009

We further investigated genome macrosynteny for Brassica species and Arabidopsis thaliana . This work aimed at comparative map construction for B. oleracea and A. thaliana chromosomes based on 160 known A. thaliana probes: 147 expressed sequence tags (ESTs) and 13 full-length cDNA clones. Based on an in silico study of the A. thaliana genome, most of the selected ESTs (83%) represented unique or low-copy genes. We identified conserved segments by the visual inspection of comparative data with a priori assumptions, and established their significance with the LineUp algorithm. Evaluation of the number of B. oleracea gene copies per A. thaliana EST revealed a fixed upward trend. We established a segregation distortion pattern for all genetic loci, with particular consideration of the type of selection (gametic or zygotic), and discuss its possible impact on genetic map construction. Consistent with previous reports, we found evidence for numerous chromosome rearrangements and the genome fragment replication of B. oleracea that have taken place since the divergence of the two species. Also, we found that over 54% of the B. oleracea genome is covered by 24 segments conserved with the A. thaliana genome. The average conserved segment is composed of 5 loci covering 19.3 cM in the B. oleracea genetic map and 2.42 Mb in the A. thaliana physical map. We have also attempted to use a unified system of conserved blocks (previously described) to verify our results and perform a comprehensive comparison with other Brassica species.
Identification of nutrient and physical seed trait QTL in the model legumeLotus japonicus
Authors: Klein Melinda A. , Grusak Michael A.
Published: September 2009

Legume seeds have the potential to provide a significant portion of essential micronutrients to the human diet. To identify the genetic basis for seed nutrient density, quantitative trait locus (QTL) analysis was conducted with the Miyakojima MG-20 × Gifu B-129 recombinant inbred population from the model legume Lotus japonicus . This population was grown to seed under greenhouse conditions in 2006 and 2007. Phenotypic data were collected for seed calcium (Ca), copper (Cu), iron (Fe), potassium (K), magnesium (Mg), manganese (Mn), phosphorus (P), sulfur (S), and zinc (Zn) concentrations and content. Data for physical seed traits (average seed mass and seed–pod allocation values) were also collected. Based on these phenotypic data, QTL analyses identified 103 QTL linked to 55 different molecular markers. Transgressive segregation, identified within this recombinant inbred population for both seed nutrient and physical traits, suggests new allelic combinations are available for agronomic trait improvement. QTL co-localization was also seen, suggesting that common transport processes might contribute to seed nutrient loading. Identification of loci involved in seed mineral density can be an important first step in identifying the genetic factors and, consequently, the physiological processes involved in mineral distribution to developing seeds. Longer term research efforts will focus on facilitating agronomic breeding efforts through ortholog identification in related crop legumes.
Relationships of Campanian olive cultivars: comparative analysis of molecular and phenotypic data
Authors: Corrado Giandomenico , La Mura Maurizio , Ambrosino Orsola , Pugliano Giuseppe , Varricchio Paola , Rao Rosa
Published: September 2009

Estimation of the genetic relatedness of traditional olive cultivars with genetic markers and phenotypic data enables progress in plant breeding, management of genetic resources, and protection of both breeders’ rights and certified premium products. We used amplified fragment length polymorphisms (AFLPs), simple sequence repeats (SSRs), and quantitative and qualitative morphological traits, including characteristics recommended for variety registration, to study genetic diversity and relationships in the olive at different levels. The 14 varieties analyzed, which are used for the production of Protected Denomination of Origin extra-virgin olive oil, represent the most important cultivars in the Campania region of Italy and typify a regional diversity characteristic of traditional olive cultivation. The genetic distances obtained with the two DNA marker systems were significantly correlated, as were those obtained by quantitative and qualitative traits. A lower but significant correlation was also observed between distances based on molecular markers and quantitative traits, but qualitative traits, even if sampled in high numbers, failed to describe the pattern of molecular similarity. Our data imply that the type and the number of phenotypic traits scored can greatly influence the outcome of the analysis, and care should be taken when qualitative and quantitative data are combined. Furthermore, the data indicate that the two molecular marker systems are useful for investigating genetic relationships, but they may also be used to complement and assist the traditional registration of varieties. We propose that since the information provided by molecular and morphological marker systems in olive is different, they should serve different purposes.
Localisation of quantitative trait loci for quality attributes in a doubled haploid population of wheat (Triticum aestivumL.)
Authors: Raman R. , Allen H. , Diffey S. , Raman H. , Martin P. , McKelvie K.
Published: September 2009

Selection of wheat germplasm for a range of quality traits has been a challenging exercise because of the cost of testing, the variation within testing data, and a poor understanding of the underlying genetics. The objective of this study was to identify quantitative trait loci (QTLs) underlying quality traits in wheat. A doubled haploid population comprising 190 lines from Chara/WW2449 was grown in two different environments and evaluated for various quality traits. A molecular map comprising 362 markers based upon simple sequence repeat, sequence tagged microsatellite, glutenin, and DArT loci was constructed and subsequently exploited to identify QTLs using a whole-genome approach. Fifteen QTLs that were consistent in the two different environments were identified for thousand kernel mass, grain protein content, milling yield, flour protein content, flour colour, flour water absorption, dough development time, dough strength (extensograph height and resistance at 5 cm), and dough extensibility (extensograph length) using the whole genome average interval mapping approach. The amount of genetic variation explained by individual QTLs ranged from 3% to 49%. A number of QTLs associated with dough strength, dough extensibility, dough development time, and flour water absorption were located close to the glutenin Glu-B1 locus on chromosome 1B. Identification of the chromosomal location and effect of the QTLs influencing wheat quality may hasten the development of superior wheats for target markets via marker-assisted selection.
High-dose diazepam facilitates core cooling during cold saline infusion in healthy volunteers
Authors: Hostler David , Northington William E. , Callaway Clifton W.
Published: September 2009

Studies have suggested that inducing mild hypothermia improves neurologic outcomes after traumatic brain injury, major stroke, cardiac arrest, or exertional heat illness. While infusion of cold normal saline is a simple and inexpensive method for reducing core temperature, human cold-defense mechanisms potentially make this route stressful or ineffective. We hypothesized that intravenous administration of diazepam during a rapid infusion of 30 mL·kg–1 of cold (4 °C) 0.9% saline to healthy subjects would be more comfortable and reduce core body temperature more than the administration of cold saline alone. Fifteen subjects received rapidly infused cold (4 °C) 0.9% saline. Subjects were randomly assigned to receive, intravenously, 20 mg diazepam (HIGH), 10 mg diazepam (LOW), or placebo (CON). Main outcomes were core temperature, skin temperature, and oxygen consumption. Data for the main outcomes were analyzed with generalized estimating equations to identify differences in group, time, or a group × time interaction. Core temperature decreased in all groups (CON, 1.0 ± 0.2 °C; LOW, 1.4 ± 0.2 °C; HIGH, 1.5 ± 0.2 °C), while skin temperature was unchanged. Mean (95% CI) oxygen consumption was 315.3 (253.8, 376.9) mL·kg–1·min–1 in the CON group, 317.9 (275.5, 360.3) in the LOW group, and 226.1 (216.4, 235.9) in the HIGH group. Significant time and group × time interaction was observed for core temperature and oxygen consumption (p < 0.001). Administration of high-dose diazepam resulted in decreased oxygen consumption during cold saline infusion, suggesting that 20 mg of intravenous diazepam may reduce the shivering threshold without compromising respiratory or cardiovascular function.
Effects of Ramadan fasting on physical performance and metabolic, hormonal, and inflammatory parameters in middle-distance runners
Authors: Chennaoui Mounir , Desgorces François , Drogou Catherine , Boudjemaa Bechir , Tomaszewski Armand , Depiesse Frédéric , Burnat Pascal , Chalabi Hakim , Gomez-Merino Danielle
Published: September 2009

The Ramadan fasting (RF) period is associated with changes in sleep habits and increased sleepiness, which may affect physical performance in athletes, and may induce metabolic, hormonal, and inflammatory disturbances. In 8 middle-distance athletes (25.0 ± 1.3 years), a maximal aerobic velocity (MAV) test was performed 5 days before RF (day –5), and on days 7 and 21 of RF. The same days, saliva samples were collected to determine cortisol and testosterone concentrations before and after the MAV test. Blood samples were collected before RF (P1), at the end of RF (P2), and 1 week post RF (P3). Plasma levels of interleukin (IL)-6, a mediator of sleepiness and energy availability, were determined. We also evaluated changes in metabolic and hormonal parameters, mood state, and nutritional and sleep profiles. During RF, mean body mass and body fat did not statistically change. Compared with day –5, MAV values decreased at days 7 and 21 (p < 0.05, respectively), while testosterone/cortisol ratio values did not change significantly. Nocturnal sleep time and energy intake were lower at day 21 than before RF (day 0/P1) (p < 0.05). At the end of RF (day 31), the fatigue score on the Profile of Mood States questionnaire was increased (p < 0.001). For P2 vs. P1, IL-6 was increased (1.19 ± 0.25 vs. 0.51 ± 0.13 pg·mL–1; p < 0.05), melatonin levels were decreased (p < 0.05), and adrenalin and noradrenalin were increased (p < 0.01 and p < 0.001, respectively). At 7 days post RF, all parameters recovered to pre-RF values. In conclusion, RF is accompanied by significant metabolic, hormonal, and inflammatory changes. Sleep disturbances, energy deficiency, and fatigue during RF may decrease physical performance in Muslim athletes who maintain training. Reduction of work load and (or) daytime napping may represent adequate strategies to counteract RF effects for Muslim athletes.
Child–adult differences in muscle strength and activation pattern during isometric elbow flexion and extension
Authors: Falk Bareket , Usselman Charlotte , Dotan Raffy , Brunton Laura , Klentrou Panagiota , Shaw Jay , Gabriel David
Published: September 2009

Muscle strength and activation were compared in boys and men during maximal voluntary elbow flexion and extension contractions. Peak torque, peak rate of torque development (dτ/dτmax), rate of muscle activation, and electromechanical delay (EMD) were measured in 15 boys (aged 9.7 ± 1.6 years) and 16 men (aged 22.1 ± 2.8 years). During flexion, peak torque was significantly lower in boys than in men (19.5 ± 5.8 vs. 68.5 ± 11.0 Nm, respectively; p < 0.05), even when controlling for upper-arm cross-sectional area (CSA), and peak electromyography activity. Boys also exhibited a lower normalized dτ/dτmax(7.2 ± 1.7 vs. 9.5 ± 1.6 (Nm·s–1)·(Nm–1), respectively; p < 0.05) and a significantly longer EMD (75.5 ± 28.4 vs. 47.6 ± 17.5 ms, respectively). The pattern was similar for extension, except that group differences in peak torque were no longer significant when normalized for CSA. These results suggest that children may be less able to recruit or fully utilize their higher-threshold motor units, resulting in lower dimensionally normalized maximal torque and rate of torque development.
Does habitual dietary intake influence myofiber hypertrophy in response to resistance training? A cluster analysis
Authors: Thalacker-Mercer Anna E. , Petrella John K. , Bamman Marcas M.
Published: September 2009

Although resistance exercise training (RT) is a common intervention to stimulate muscle protein synthesis and increase skeletal muscle mass, the optimal daily protein and total energy intakes sufficient to support RT-mediated muscle growth are as yet unclear. Further, the efficacy of RT varies widely among adults of all ages and whether this is attributable to interindividual differences in nutrition is not known. To determine if self-selected daily intake of macronutrients and specific components of dietary protein and fat are predictive of the magnitude of RT-mediated muscle growth, detailed 4-day dietary records were analyzed on 60 subjects previously clustered (K-means cluster analysis) as non-, modest, and extreme responders (non, n = 16; mod, n = 29; xtr, n = 15), based on the magnitudes of change in vastus lateralis myofiber cross-sectional area following a 16-week, 3-day-per-week, high-intensity RT. Despite the marked contrast between 60% myofiber hypertrophy in xtr and zero growth in non, we found no differences among response clusters in daily intakes of energy (mean ± SEM: non 102 ± 8; mod 111 ± 6; xtr 109 ± 5 kJ·kg–1·day–1), protein (non 0.97 ± 0.08; mod 1.07 ± 0.07; xtr 1.05 ± 0.06 g·kg–1·day–1), carbohydrate (non 3.02 ± 0.24; mod 3.18 ± 0.20; xtr 3.14 ± 0.17 g·kg–1·day–1), and fat (non 0.95 ± 0.09; mod 1.05 ± 0.08; xtr 1.03 ± 0.08 g·kg–1·day–1), which generally met or exceeded dietary recommendations. There were no cluster differences in intakes of branched chain amino acids known to stimulate muscle protein synthesis. Using the novel K-means clustering approach, we conclude from this preliminary study that protein and energy intakes were sufficient to facilitate modest and extreme muscle growth during RT and intrinsic or extrinsic factors other than nutrient ingestion apparently impaired the anabolic response in nonresponders.
Dietary patterns associated with glycemic index and glycemic load among Alberta adolescents
Authors: Forbes Laura E. , Storey Kate E. , Fraser Shawn N. , Spence John C. , Plotnikoff Ronald C. , Raine Kim D. , Hanning Rhona M. , McCargar Linda J.
Published: September 2009

The purpose of this study was to assess the dietary glycemic index (GI) and glycemic load (GL) of adolescents, based on a Web-based 24-h recall, and to investigate dietary predictors of GI and GL. In addition, the relationship between GI and GL and weight status was examined. A Web-based 24-h recall was completed by 4936 adolescents, aged 9–17 years; macronutrient and food group intakes were assessed using the ESHA Food Processor, the Canadian Nutrient File, and Canada’s Food Guide. Dietary GI and GL were calculated based on published GI values for foods. Students provided self-reported height and mass. Multiple regression models assessed the ability of food group choices and food behaviours to predict GI and GL. Mean GI was 55 for girls and 56 for boys. Mean GL was 128 for girls and 168 for boys. Food group choices explained 26% of the variation in GI (p < 0.01) and 84% of the variation in GL (p < 0.01). The number of meals per day explained 10% (p < 0.01), and eating meals outside of the home accounted for 2.5% (p < 0.01) of the variation in GL; however, these results disappeared when adjusted for total energy intake. The GI was positively correlated with body mass index in girls (r = 0.05, p = 0.02), and GL was significantly higher among nonoverweight boys than overweight boys. This study identified eating patterns related to daily GI and GL, and suggests certain dietary patterns that could have beneficial effects on health. It also showed that GI and GL were weakly related to weight status.
Modeling age-related neuromuscular changes in humans
Authors: Webber Sandra C. , Porter Michelle M. , Gardiner Phillip F.
Published: September 2009

With aging, motoneurons and muscle tissue undergo significant changes, which influence function in terms of strength, mobility, and overall independence. Mathematical modeling provides a practical method of studying the relationships among recruitment, rate-coding, and force output in motor units, and may be used to predict functional neuromuscular changes related to aging. For this study, the Heckman–Binder model was used to examine changes in human quadriceps motor units. Relationships among current input, firing frequency, and force output were defined for both a younger and an older individual. Included in the model were age-related effects associated with reduced muscle contractile speed; reduced muscle-fibre number, size, and specific tension; reduced gain of the frequency–current relationship; decreased size of motoneurons; and altered motor unit remodeling. Adjustment of this model to reflect age-related changes resulted in a leftward shift of the force–frequency function, lower firing frequency for any given current injected into the motoneuron, and a reduction in maximal force output. The model suggests that older individuals are capable of reaching force levels up to approximately 50% of those attained by younger individuals, with relatively similar or even slightly lower levels of current input. This could mean that the sense of effort and the contribution of factors other than degree of effort from afferent inputs to the pool, including conscious supraspinal centres, might be different in the older adult.
The effect of a carbohydrate–caffeine sports drink on simulated golf performance
Authors: Stevenson Emma J. , Hayes Philip R. , Allison Sarah J.
Published: September 2009

A round of golf lasts approximately 4 h, during which time homeostasis could be challenged through either hypoglycemia or hypohydration. This might result in impaired motor skill or cognitive performance. Given the high cognitive demand of putting and the potential fatiguing effects from prolonged walking, the combination of a caffeine and carbohydrate drink could be beneficial in offsetting hypoglycemia and hypohydration. This study used a laboratory-simulated round of golf to examine the effect of an isotonic carbohydrate and caffeine sports drink on putting performance during a round of golf. After institutional ethics approval, 20 male golfers (mean ± standard deviation: age 23 ± 4 years, stature 176.4 ± 5.6 cm, mass 72.8 ± 17.4 kg, handicap 15 ± 4, daily caffeine consumption 157.3 ± 47.2 mg) consumed either an isotonic sports drink containing caffeine (6.4 g carbohydrate and 16 mg caffeine per 100 mL) or a no-energy, flavour-matched placebo drink in a double-blind, randomized, counter-balanced crossover design . Drinks were consumed preround (5 mL·kg–1 body mass (BM)) and at holes 6 and 12 (2.5 mL·kg–1 BM). Participants therefore consumed 1.6 mg·kg–1 BM of caffeine and 0.64 g·kg–1 BM of carbohydrate throughout the trial. Five and 2 m putting performance were assessed at each hole. Self-rated mood assessments were carried out every third hole. Putting performance over 5 m and 2 m and self-rated scores for alertness and relaxation showed a main effect for drink (p < 0.05). Ratings of mental fatigue and tiredness significantly increased during the round (p < 0.001). In experienced golfers, the consumption of an isotonic carbohydrate sports drink containing caffeine prior to and during a round of golf improved putting performance and increased feelings of alertness.
Are Canadians meeting the guidelines for moderate and vigorous leisure-time physical activity?
Authors: Bryan Shirley N. , Katzmarzyk Peter T.
Published: September 2009

The purpose of this study was to determine the proportion of Canadian adults (aged 18–55 years) who met the guidelines for moderate and vigorous physical activity set out in Canada’s Physical Activity Guide to Healthy Active Living. Leisure-time physical activity energy expenditure from moderate- and vigorous-intensity activities was calculated using data from the National Population Health Surveys (1994–1998) and the Canadian Community Health Surveys (2001–2007). The prevalence was estimated for no leisure-time physical activity, meeting only the moderate guideline, meeting both the moderate and vigorous guidelines, and meeting the guidelines through a combination of moderate and vigorous activities. Logistic regression was used to determine the odds of meeting the guidelines by various demographic characteristics. The prevalence of no activity did not change appreciably over time, ranging from 6.5% to 10%, depending on the survey year. Reporting of no activity was more prevalent among older adults, those in lower income groups, and those with a body mass index (BMI) ≥30 kg·m–2. Overall, 65% of adults met the guidelines for physical activity in 2007, which has increased from 54% in 1994–1995. Men, younger adults, those with a higher income, and those with a lower BMI more often met the guidelines. Among all subgroups, meeting the guidelines was most often accomplished through participation in moderate-intensity activities. These findings should be considered when designing and implementing public health interventions that promote participation in daily physical activity.
Antioxidant status, oxidative stress, and damage in elite kayakers after 1 year of training and competition in 2 seasons
Authors: Teixeira Vitor , Valente Hugo , Casal Susana , Pereira Laura , Marques Franklim , Moreira Pedro
Published: September 2009

The large volume of training performed by elite athletes throughout the season can translate into a chronic oxidative insult. To study the effects that chronically high training loads have on athletes’ redox status, superoxide dismutase (SOD), glutathione reductase, glutathione peroxidase (GPx), and creatine kinase activities; total antioxidant status (TAS); and uric acid, retinol, α-tocopherol, α-carotene, β-carotene, lycopene, lutein + zeaxanthin, vitamin C, thiobarbituric acid reactive substances (TBARS), interleukin-6, and cortisol levels were determined in 9 kayakers (6 men) in a competitive period during the first season (June, T1), and in precompetitive (March, T2) and competitive (June, T3) periods during the following season. TAS decreased from the first to the second season (T1 vs. T2, p < 0.001; T1 vs. T3, p < 0.001). TBARS (p = 0.024) decreased from T1 to T2. The α-tocopherol increase (p = 0.001) from T1 to T2 lost statistical significance after adjustment for total lipids (p = 0.243). GPx (p = 0.003) increased, while SOD (p < 0.001) and uric acid (p = 0.032) decreased from T2 to T3. Cortisol levels decreased significantly throughout the study (T1 vs. T2, p = 0.042; T2 vs. T3, p = 0.018; T1 vs. T3, p = 0.002). No significant differences were observed for any of the other parameters studied. Antioxidant status changed more within the same season than from one season to another. Redox markers should be monitored throughout the season to detect athletes at an increased oxidative risk.
Physical activity and abdominal obesity in youth
Authors: Kim YoonMyung , Lee SoJung
Published: September 2009

Childhood obesity continues to escalate despite considerable efforts to reverse the current trends. Childhood obesity is a leading public health concern because overweight–obese youth suffer from comorbidities such as type 2 diabetes mellitus, nonalcoholic fatty liver disease, metabolic syndrome, and cardiovascular disease, conditions once considered limited to adults. This increasing prevalence of chronic health conditions in youth closely parallels the dramatic increase in obesity, in particular abdominal adiposity, in youth. Although mounting evidence in adults demonstrates the benefits of regular physical activity as a treatment strategy for abdominal obesity, the independent role of regular physical activity alone (e.g., without calorie restriction) on abdominal obesity, and in particular visceral fat, is largely unclear in youth. There is some evidence to suggest that, independent of sedentary activity levels (e.g., television watching or playing video games), engaging in higher-intensity physical activity is associated with a lower waist circumference and less visceral fat. Several randomized controlled studies have shown that aerobic types of exercise are protective against age-related increases in visceral adiposity in growing children and adolescents. However, evidence regarding the effect of resistance training alone as a strategy for the treatment of abdominal obesity is lacking and warrants further investigation.
Effects of eccentric treadmill exercise on inflammatory gene expression in human skeletal muscle
Authors: Buford Thomas W. , Cooke Matthew B. , Shelmadine Brian D. , Hudson Geoffrey M. , Redd Liz , Willoughby Darryn S.
Published: September 2009

The present study examined the skeletal muscle expression of several genes related to the inflammatory process before and after a bout of downhill running. Twenty-nine males between the ages of 18 and 35 years performed a 45-min downhill (–17.5%) treadmill protocol at 60% of maximal oxygen consumption. Venous bloods samples and muscle biopsy samples from the vastus lateralis were donated prior to and at 3-h and 24-h postexercise, along with ratings of perceived muscle soreness. Serum creatine kinase (CK) was determined, as was skeletal muscle gene expression of interleukin (IL)-6, IL-8, IL-12 (p35), tumor necrosis factor-alpha (TNF-α), IL-1β, cyclooxygenase 2 (COX2), and nuclear factor kappa B (NFkB) (p105/p50). Gene expression was analyzed using RT-PCR and compared with a standard housekeeping gene (β-actin). Data were analyzed for statistical differences using multivariate analysis of variance with univariate follow-up. In addition, Pearson correlations were conducted to determine if any significant relationship exists between any of these transcripts and both CK and muscle soreness. Significant (p < 0.05) up-regulations in IL-6, IL-8, and COX2 mRNA expression were observed compared with baseline, whereas no significant changes for IL-12, IL-1β, TNF-α, or NFkB were noted. Significant increases in IL-6 mRNA were observed at 3 h (p < 0.001) and 24 h (p = 0.043), whereas significant increases in IL-8 (p = 0.001) and COX2 (p = 0.046) mRNA were observed at 3-h postexercise. In addition, muscle soreness was significantly correlated with IL-8 at 24 h (r = –0.370; p = 0.048), whereas CK was significantly related to NFkB at baseline (r = –0.460; p = 0.012). These data indicate that increases in the mRNA expression of IL-6, IL-8, and COX2 occur in the vastus lateralis as a result of damaging eccentric exercise in young, recreationally trained males. Further, it appears that IL-8 transcription may play some role in inhibiting postexercise muscle soreness, possibly through regulation of angiogenesis.
Systemic indices of skeletal muscle damage and recovery of muscle function after exercise: effect of combined carbohydrate–protein ingestion
Authors: Betts James A. , Toone Rebecca J. , Stokes Keith A. , Thompson Dylan
Published: September 2009

Previous studies indicate that exercise-induced muscle damage may be attenuated when protein is included in a carbohydrate recovery supplement. This study was designed to examine systemic indices of muscle damage, inflammation, and recovery of muscle function, following strenuous exercise, with ingestion of either carbohydrate alone or a carbohydrate–protein mixture. Seventeen highly trained volunteers participated in 2 trials in a randomized order, separated by approximately 9 weeks. Each trial involved 90 min of intermittent shuttle-running, either with ingestion of a 9% sucrose solution during and for 4 h after (1.2 g·kg–1 body mass·h–1) or with the same solution plus 3% whey protein isolate (0.4 g·kg–1 body mass·h–1). Blood was sampled throughout and 24 h after each trial to determinate the systemic indices of muscle damage and inflammation. An isokinetic dynamometer was used to establish reliable baseline measurements of peak isometric torque for knee and hip flexors and extensors, which were then followed-up at 4-, 24-, 48-, and 168-h postexercise. The exercise protocol resulted in significantly elevated variables indicative of muscle damage and inflammation, while peak isometric torque was immediately reduced by 10%–20% relative to baseline, across all muscle groups tested. However, none of these responses varied in magnitude or time-course between the treatments, or between participants’ first and second trials. The addition of whey protein isolate to a dietary carbohydrate supplement ingested during and for 4 h following strenuous exercise did not attenuate systemic indices of muscle damage or inflammation, nor did it restore muscle function more rapidly than when the carbohydrate fraction was ingested alone.
Photocatalytic decolourization of the X3B textile dye in aqueous solutions using iron-rich montmorilloniteA paper submitted to the Journal of Environmental Engineering and Science.
Authors: Wang Zong-ping , Huang Li-zhi , Du Lin , Sheng Hua , Lv Bo
Published: September 2009

Photocatalytic decolourization of textile dye X3B in aqueous solutions was investigated, using iron-rich montmorillonite (MMt, 2.24%Fe2O3) under a 15 W low-pressure UV lamp (λ = 254 nm, I = 48.4 μW/cm2). Hydroxyl radicals (•OH) were detected by tert-butyl alcohol (TBA) in aqueous MMt suspensions under UV irradiation and were found to be responsible for the degradation of X3B. Free iron ions dissolved in MMt suspensions, structural iron in the MMt solid, and the charged surface of nano clay are responsible for hydroxyl radical (•OH) production. Low pH values are favorable for the decolourization of X3B. The •OH concentration increased with increasing aqueous MMt concentrations in the range of 0 – 2.0 g/L; higher concentrations, for example, 5.0 g/L MMt, inhibited the •OH production. The addition of oxalate was favorable for X3B photodegradation in acid-washed MMt suspensions. This study shows that iron-rich MMt is a potential photocatalyst for the treatment of dye wastewater.
Optimization of growth media for enhanced production of laccase byCryptococcus albidusand its application for bioremediation of chemicals A paper submitted to the Journal of Environmental Engineering and Science.
Authors: Singhal Anjali , Choudhary Gaurav , Thakur Indu Shekhar
Published: September 2009

Cryptococcus albidus , isolated from the sediments of Century Pulp and Paper Mill, Lalkuan, Nainital, Uttarakhand, India, produced a copper containing oxidase, laccase, that was capable of degrading environmental pollutants. Bagasse was the most efficient inducer for laccase production. The Taguchi approach was used to optimize the growth media for five factors, i.e., pH, copper sulphate, carbon, nitrogen, and the inducer at four levels using an M-16 orthogonal array. The optimum conditions for laccase production were pH (6), CuSO4(2 mmol/L), meat peptone (0.5%), glucose (0.1%), and bagasse (1.0%). After optimization, laccase production increased seven times from 32 to 219 IU/mg. The inducer (bagasse) had maximum effect on laccase production leading to 52% increase, while pH had minimum effect with 7% increase. Growth media with laccase activity (2 U/mL) was applied for the bioremediation of dyes, effluent, and chemical compounds. These experiments showed that the growth media with laccase activity (2 U/mL) produced by Cryptococcus albidus had good potential for bioremediation of toxic and recalcitrant compounds. Further, the laccase enzyme extracted from the growth media was fractionated by DEAE-cellulose ion-exchange chromatography, and the molecular weight of the enzyme determined by sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS–PAGE) was found to be 64 kDa. The activity of laccase was confirmed by native PAGE, in which ABTS was used for staining gel.
Smoothed particle hydrodynamics hybrid model of ice-jam formation and release
Authors: Nolin Simon , Roubtsova Varvara , Morse Brian , Quach Tung
Published: September 2009

This article presents a numerical public domain model, SPIKI, to simulate water and ice dynamics during ice-jam formation and river breakup events. The model has two independent coupled components. The first is a one-dimensional (1-D) finite volume Saint-Venant hydrodynamic model, whereas the second is a two-dimensional (2-D) model called smoothed particle hydrodynamics (SPH) ice-rubble model that simulates ice dynamics. Application to an idealized test case demonstrated the effect of a variable angle of internal friction and the effect of ice-bank friction during the formation of an ice jam. Application to an actual event on the Saint John River in New Brunswick, Canada reproduced, within the certainty of the observed data, an observed ice-jam profile and the rise in water level and discharge after the release of the jam.