bluuebunny/crossref_metadata_2025 huggingface dataset:
Intracellular Bacteria in Plants: Elucidation of Abundant and Diverse Cytoplasmic Bacteria in Healthy Plant Cells Using In Vitro Cell and Callus Cultures
Authors: Thomas Pious , Franco Christopher M. M.
Published: January 2021

This study was initiated to assess whether the supposedly axenic plant cell cultures harbored any cultivation-recalcitrant endophytic bacteria (CREB). Adopting live-cell imaging with bright-field, fluorescent and confocal microscopy and bacterial 16S-rRNA gene taxonomic profiling, we report the cytoplasmic association of abundant and diverse CREBs in long-term actively maintained callus and cell suspension cultures of different plant species. Preliminary bright-field live-cell imaging on grape cell cultures showed abundant intracellular motile micro-particles resembling bacteria, which proved uncultivable on enriched media. Bacterial probing employing DNA stains, transmission electron microscopy, and Eubacterial FISH indicated abundant and diverse cytoplasmic bacteria. Observations on long-term maintained/freshly established callus stocks of different plant species—grapevine, barley, tobacco, Arabidopsis, and medicinal species—indicated intracellular bacteria as a common phenomenon apparently originating from field shoot tissues.Cultivation-independent 16S rRNA gene V3/V3–V4 amplicon profiling on 40-year-old grape cell/callus tissues revealed a high bacterial diversity (>250 genera), predominantly Proteobacteria, succeeded by Firmicutes, Actinobacteria, Bacteriodetes, Planctomycetes, and 20 other phyla, including several candidate phyla. PICRUSt analysis revealed diverse functional roles for the bacterial microbiome, majorly metabolic pathways. Thus, we unearth the widespread association of cultivation-recalcitrant intracellular bacteria “Cytobacts” inhabiting healthy plant cells, sharing a dynamic mutualistic association with cell hosts.
New/Different Look at the Presence of Aspergillus in Mycobacterial Pulmonary Diseases. Long-Term Retrospective Cohort Study
Authors: Fukushima Kiyoharu , Kida Hiroshi
Published: January 2021

Chronic pulmonary aspergillosis (CPA) has been reported to be associated with poor prognosis in non-tuberculous mycobacteria (NTM)-pulmonary disease (PD) patients. However, whether isolation of Apergillus species is associated with poor outcome or mostly just the reflection of colonization is a widely debated issue and a yet unsolved question. We conducted this single-centered retrospective cohort study of 409 NTM-PD patients to assess the impacts and prevalence of Aspergillus isolation and CPA development. The median observation time was 85 months. Aspergillus species were isolated from 79 (19.3%) and 23 (5.6%) developed CPA. Isolation of Aspergillus species was not associated with mortality in NTM-PD patients (p = 0.9016). Multivariate logistic regression analysis revealed that higher CRP (p = 0.0213) and AFB stain positivity (p = 0.0101) were independently associated with Aspergillus isolation. Different mycobacterial species were not associated with Aspergillus isolation. Survival curves for patients with CPA diagnosis were significantly and strikingly different from those without (p = 0.0064), suggesting that CPA development severely affects clinical outcome. Multivariate logistic regression analysis revealed that the use of systemic steroids (p = 0.0189) and cavity (p = 0.0207) were independent risk factors for the progression to CPA. Considering the high mortality rate of CPA in NTM-PD, early diagnosis and treatment are essential to improve outcomes for NTM-PD patients.
Molecular Epidemiology and Characterization of Carbapenem-Resistant Klebsiella pneumoniae Isolated from Urine at a Teaching Hospital in Taiwan
Authors: Lee Yuarn-Jang , Huang Chih-Hung , Ilsan Noor Andryan , Lee I-Hui , Huang Tzu-Wen
Published: January 2021

Urinary tract infections (UTIs) are common in clinics and hospitals and are associated with a high economic burden. Enterobacterium Klebsiella pneumoniae is a prevalent agent causing UTIs. A high prevalence of carbapenem-resistant K. pneumoniae (CRKP) has emerged recently and is continuing to increase. Seventeen urinary CRKP isolates collected at a teaching hospital in Taiwan from December 2016 to September 2017 were analyzed to elucidate their drug resistance mechanisms. Two-thirds of the isolates were obtained from outpatients. Antimicrobial susceptibility tests demonstrated multidrug resistance in all the isolates. Multilocus sequence typing analysis showed high diversity among the isolates. PCR analysis demonstrated the presence of carbapenemases in three isolates. All isolates carried at least one other extended-spectrum β-lactamase, including TEM, DHA, and CTX-M. Fifteen isolates contained mutations in one of the outer membrane porins that were assessed. The expression levels of the acrB and/or oqxB efflux pump genes, as determined by qRT-PCR, were upregulated in 11 isolates. Six isolates might have utilized other efflux pumps or antimicrobial resistance mechanisms. These analyses demonstrated a highly diverse population and the presence of complex resistance mechanisms in urinary isolates of K. pneumoniae.
Dynamics of the Apple Fruit Microbiome after Harvest and Implications for Fruit Quality
Authors: Bösch Yvonne , Britt Elisabeth , Perren Sarah , Naef Andreas , Frey Jürg E. , Bühlmann Andreas
Published: January 2021

The contribution of the apple microbiome to the production chain of apple was so far largely unknown. Here, we describe the apple fruit microbiome and influences on its composition by parameters such as storage season, storage duration, storage technology, apple variety, and plant protection schemes. A combined culturing and metabarcoding approach revealed significant differences in the abundance, composition, and diversity of the apple fruit microbiome. We showed that relatively few genera contribute a large portion of the microbiome on fruit and that the fruit microbiome changes during the storage season depending on the storage conditions. In addition, we show that the plant protection regime has an influence on the diversity of the fruit microbiome and on the dynamics of pathogenic fungal genera during the storage season. For the genus Neofabraea, the quantitative results from the metabarcoding approach were validated with real-time PCR. In conclusion, we identified key parameters determining the composition and temporal changes of the apple fruit microbiome, and the main abiotic driving factors of microbiome diversity on apple fruit were characterized.
Synthesis and Application of FeCu Bimetallic Nanoparticles in Coal Mine Wastewater Treatment
Authors: Dlamini Nkosinathi Goodman , Basson Albertus Kotze , Pullabhotla Viswanadha Srirama Rajasekhar
Published: January 2021

Wastewater treatment has become a global challenge with wastewater treatment cost fast increasing. Industrial processes such as downstream processes, wastewater treatment, and several fermentation processes depend largely on the use of flocculants. Synthetic flocculants, which are conventionally used in wastewater treatment, are hazardous to the environment and are carcinogenic to human health. Therefore, bioflocculants can be used as an alternative due to their biodegradable and environmentally friendly nature. However, low efficacy hinders their industrial application. This necessitates the need for a new technology to combat wastewater treatment challenges. Nanotechnology provides the platform to explore the possible solutions to these problems. The combination of two different metals results in the formation of bimetallic nanoparticles (BNPs). Due to better properties, bimetallic nanoparticles have attracted huge attention as compared to monometallic nanoparticles from both technological and scientific views. Iron copper bimetallic nanoparticles (FeCu BNPs) were successfully stabilized by bioflocculant and used in the coal mine wastewater treatment. Infrared spectrometric analysis showed the presence of carboxyl (COO−), hydroxyl (−OH), and amino (−NH2) functional groups. SEM images showed irregular and crystalline like morphology. Meanwhile, TEM analysis revealed chain like agglomerated nanoparticles. FeCu BNPs exhibited a wide pH stability range from 3, 7, and 11 with 99% flocculation activity at pH 7 and at lowest dosage of 0.2 mg/mL. After treating wastewater, the FeCu BNPs could remove pollutants such as phosphate, sulfate, calcium, chemical oxygen demand (COD), and biological oxygen demand (BOD) with phosphate having the highest removal efficacy of 99%.
The Three Pillars of Natural Product Dereplication. Alkaloids from the Bulbs of Urceolina peruviana (C. Presl) J.F. Macbr. as a Preliminary Test Case
Authors: Lianza Mariacaterina , Leroy Ritchy , Machado Rodrigues Carine , Borie Nicolas , Sayagh Charlotte , Remy Simon , Kuhn Stefan , Renault Jean-Hugues , Nuzillard Jean-Marc
Published: January 2021

The role and importance of the identification of natural products are discussed in the perspective of the study of secondary metabolites. The rapid identification of already reported compounds, or structural dereplication, is recognized as a key element in natural product chemistry. The biological taxonomy of metabolite producing organisms, the knowledge of metabolite molecular structures, and the availability of metabolite spectroscopic signatures are considered as the three pillars of structural dereplication. The role and the construction of databases is illustrated by references to the KNApSAcK, UNPD, CSEARCH, and COCONUT databases, and by the importance of calculated taxonomic and spectroscopic data as substitutes for missing or lost original ones. Two NMR-based tools, the PNMRNP database that derives from UNPD, and KnapsackSearch, a database generator that provides taxonomically focused libraries of compounds, are proposed to the community of natural product chemists. The study of the alkaloids from Urceolina peruviana, a plant from the Andes used in traditional medicine for antibacterial and anticancer actions, has given the opportunity to test different approaches to dereplication, favoring the use of publicly available data sources.
Improving Environmental Efficiency of Reverse Filling Cementitious Materials through Packing Optimization and Fiber Incorporation
Authors: Liu Yang , Chen Lou , Zheng Keren , Yuan Qiang
Published: January 2021

To improve the environmental efficiency of the reverse filling system, three strategies aim to optimize the packing density, and the mechanical property were adopted in this study. Based on the compressive packing model (CPM), the relationship between the D50 ratio and maximum theoretical packing density for a reverse filling system with 25% and 30% superfine Portland cement was established. For comparison, silica fume and steel fiber were also added to the reverse filling system, respectively. The improvement of packing density by adjusting the D50 ratio was verified through the minimum water demand method, CPM, and modified Andreasen and Andersen (MAA) model. Compared to the reverse filling system added with 3 wt % silica fume, which possesses a comparable mechanical property with the optimized group (adjusted D50 ratio), the incorporation of steel fiber shows a more significant increase. The environmental efficiency of all the samples was quantified into five aspects through the calculation based on the mix proportion, compressive strength, and hydration degree. The comprehensive evaluation demonstrated that the optimized reverse filling system exerts a lower environmental impact and possesses a much higher cement use efficiency compared to the majority of ultra-high performance concrete (UHPC)/ ultra-high performance fiber-reinforced concrete (UHPFRC) reported in published papers.
Essential Oils as Natural Sources of Fragrance Compounds for Cosmetics and Cosmeceuticals
Authors: Sharmeen Jugreet , Mahomoodally Fawzi , Zengin Gokhan , Maggi Filippo
Published: January 2021

Fragrance is an integral part of cosmetic products and is often regarded as an overriding factor in the selection of cosmetics among consumers. Fragrances also play a considerable role in masking undesirable smells arising from fatty acids, oils and surfactants that are commonly used in cosmetic formulations. Essential oils are vital assets in the cosmetic industry, as along with imparting pleasant aromas in different products, they are able to act as preservatives and active agents and, simultaneously, offer various benefits to the skin. Moreover, the stimulating demand for natural ingredients has contributed massively to a renewed interest in cosmetic and wellness industries in plant derivatives, especially essential oils. This has led popular cosmetic companies to endorse natural fragrances and opt for minimally processed natural ingredients, given the potentially adverse health risks associated with artificial fragrance chemicals, which are major elements of cosmetics. Among the high-valued essential oils used as fragrances are citrus, lavender, eucalyptus, tea tree and other floral oils, among others, while linalool, geraniol, limonene, citronellol, and citral are much-appreciated fragrance components used in different cosmetics. Thus, this review aimed to highlight the enormous versatility of essential oils as significant sources of natural fragrances in cosmetics and cosmeceuticals. Moreover, a special focus will be laid on the different aspects related to essential oils such as their sources, market demand, chemistry, fragrance classification, aroma profile, authenticity and safety.
Physical Enhancement? Nanocarrier? Current Progress in Transdermal Drug Delivery
Authors: Uchida Noriyuki , Yanagi Masayoshi , Hamada Hiroki
Published: January 2021

A transdermal drug delivery system (TDDS) is a method that provides drug adsorption via the skin. TDDS could replace conventional oral administration and blood administration because it is easily accessible. However, it is still difficult to design efficient TDDS due to the high barrier property of skin covered with stratum corneum, which inhibits the permeation of drug molecules. Thus far, TDDS methods by applying physical stimuli such as microneedles and chemical stimuli such as surfactants have been actively developed. However, it has been hard to avoid inflammation at the administration site because these methods partially destroy the skin tissue. On the other hand, TDDS with nanocarriers minimizing damage to the skin tissues has emerged together with the development of nanotechnology in recent years. This review focuses on current trends in TDDS.
The Educational Gradient in Intake of Energy and Macronutrients in the General Adult and Elderly Population: The Tromsø Study 2015–2016
Authors: Nilsen Linn , Hopstock Laila A. , Skeie Guri , Grimsgaard Sameline , Lundblad Marie W.
Published: January 2021

Worldwide, there are socioeconomic inequalities in health and diet. We studied the relationship between education and nutrient intake in 11,302 women and men aged 40–96 years who participated in the seventh survey of the population-based Tromsø Study (2015–2016), Norway (attendance 65%). Diet was assessed using a validated food-frequency questionnaire. We examined the association between education and intake of total energy and macronutrients by sex using linear and logistic regression models adjusted for age, body mass index, leisure time physical activity and smoking. The intake of macronutrients was compared with the Nordic Nutrition Recommendations 2012. There was a positive association between education and intake of fiber and alcohol, and a negative association between education and intake of total carbohydrates and added sugar in both women and men. Participants with long tertiary education had higher odds of being compliant with the recommended intake of fiber and protein and the maximum recommended level for added sugar and had lower odds of being compliant with the recommended intake of total carbohydrates and the maximum recommended level for alcohol, compared to participants with primary education. Overall, we found that participants with higher education were more compliant with the Nordic Nutrition Recommendations 2012.
Trends in Vitamin C Consumption in the United States: 1999–2018
Authors: Brauchla Mary , Dekker Mark J. , Rehm Colin D.
Published: January 2021

Low intakes of fruits and vegetables have resulted in suboptimal intakes of several micronutrients, including vitamin C. This cross-sectional study used data from 84,902 children/adults (≥1 y) who completed a 24-h dietary recall as part of the United States National Health and Nutrition Examination Survey (1999–2018). Mean vitamin C intakes from foods/beverages were calculated as were trends in major food/beverage sources of vitamin C. Percentages below the Estimated Average Requirement (EAR) were estimated. Overall, mean vitamin C consumption declined by 23% (97–75 mg/d; p-value for trend < 0.001). 100% fruit juice was the leading source of vitamin C (25.6% of total or 21.7mg/d), but this declined by 48% (25–13 mg/d; p-value for trend < 0.001). Whole fruit increased among children/adolescents (+75.8%;10–17 mg/d; p-value for trend < 0.001), but not adults, while the vegetable contribution was generally unchanged. The proportion of the population below the EAR increased by 23.8% on a relative scale or 9 percentage points on an absolute scale (38.3–47.4%). Declines in vitamin C intake is driven largely by decreases in fruit juice coupled with modest increases in whole fruit. Due to associations between vitamin C intake and numerous health outcomes these trends warrant careful monitoring moving forward.
Transfer of Lipophilic Drugs from Nanoemulsions into Lipid-Containing Alginate Microspheres
Authors: Knoke Sabrina , Bunjes Heike
Published: January 2021

Knowledge about the release behavior and drug retention properties of colloidal carriers is of essential importance for quality control as well as to predict in vivo performance. When conducting release studies from such systems, the release media should preferentially contain lipophilic acceptor components in order to mimic physiological conditions. In this study, transfer from a trimyristin nanoemulsion into lipid-containing hydrogel beads was investigated for fenofibrate, cannabidiol, retinyl acetate, orlistat, and lumefantrine. To generate the acceptor system, a trimyristin nanoemulsion was incorporated into Ca-alginate microspheres (mean diameter ~40 µm) with a spraying method. Using this approach, the advantages of small lipophilic acceptor particles with a large interfacial area were combined with a single separation process from the donor via a filtration step. The method was applicable to distinguish between fast (fenofibrate) and slow drug transfer (lumefantrine) with good time resolution. Lipophilicity, estimated according to the calculated logP value of the respective drug, was a major factor influencing the transfer performance: the higher the logP value, the slower the transfer. This experimental setup is a promising technique to investigate the release of poorly water-soluble drugs from various types of nanocarriers under closer to physiological conditions than with many other methods currently applied.
The Effect of Zinc, Copper, and Silver Ions on Oat (Avena sativa L.) Androgenesis
Authors: Warchoł Marzena , Juzoń Katarzyna , Dziurka Kinga , Czyczyło-Mysza Ilona , Kapłoniak Kamila , Marcińska Izabela , Skrzypek Edyta
Published: January 2021

Oat (Avena sativa L.) cultivars ‘Bingo’ and ‘Chwat’ were used to compare the embryogenesis competence of another culture. Despite the embryo-like structures obtained from both tested cultivars, only ‘Chwat’ produced green plantlets, which confirmed the cultivar dependency. ‘Chwat’ produced the highest number of embryo-like structures and green plantlets (0.7/100 anthers and 0.1/100 anthers, respectively). The embryo-like structure formation also depended on cold pretreatment combined with Cu2+, Zn2+, or Ag+ ion supplementation, which was applied during the tiller pretreatment or added to the induction media. The highest number of embryo-like structures (2.1/100 anthers) were observed on anthers derived from the tillers kept in a 50% Hoagland medium with the addition of 10 µM of CuSO4. In turn, the induction media supplemented with the ions Cu2+, Zn2+, or Ag+ increased neither the number of embryo-like structures nor the green plantlet production compared to the control conditions. However, such ion applications turned out to be most effective when the induction medium was enriched with 25 µM of AgNO3 and left to obtain the highest number of embryo-like structures and green plantlets (0.8/100 anthers and 0.2/100 anthers, respectively). Therefore, more attention should be paid to the possibilities of adjusting the media nutrient composition, as this may be the only way to significantly increase the efficiency of this method.
Indirect Somatic Embryogenesis and Cryopreservation of Agave tequilana Weber Cultivar ‘Chato’
Authors: Delgado-Aceves Lourdes , González-Arnao María Teresa , Santacruz-Ruvalcaba Fernando , Folgado Raquel , Portillo Liberato
Published: January 2021

Agave tequilana Weber cultivar ‘Chato’ represents an important genetic supply of wild severely in decline populations of ‘Chato’ for breeding and transformation programs. In this work, the indirect somatic embryogenesis and cryopreservation of Somatic Embryos (SEs) were investigated using the ‘Chato’ cultivar as a study case. Methods: Embryogenic calli were induced by the cultivation of 1 cm of young leaves from in vitro plants on MS semisolid medium supplemented with 24.84, 33.13, 41.41, 49.69, and 57.98 μM 4-amino-3,5,6-trichloro-2- pyridinecarboxylic acid (picloram) in combination with 2.21, 3.32, and 4.43 μM 6-benzylaminopurine (BAP). The origin and structure of formed SEs were verified by histological analysis. Cryopreservation studies of SEs were performed following the V-cryoplate technique and using for dehydration two vitrification solutions (PVS2 and PVS3). Results: The highest average (52.43 ± 5.74) of produced SEs and the Embryo Forming Capacity (estimated index 52.43) were obtained using 49.69 µM picloram and 3.32 µM BAP in the culture medium. The highest post-cryopreservation regrowth (83%) and plant conversion rate (around 70%) were achieved with PVS2 at 0 °C for 15 min. Conclusion: Our work provides new advances about somatic embryogenesis in Agave and reports the first results on cryopreservation of SEs of this species.
Plant Available Zinc Is Influenced by Landscape Position in the Amhara Region, Ethiopia
Authors: Desta Mesfin K. , Broadley Martin R. , McGrath Steve P. , Hernandez-Allica Javier , Hassall Kirsty L. , Gameda Samuel , Amede Tilahun , Haefele Stephan M.
Published: January 2021

Zinc (Zn) is an important element determining the grain quality of staple food crops and deficient in many Ethiopian soils. However, farming systems are highly variable in Ethiopia due to different soil types and landscape cropping positions. Zinc availability and uptake by plants from soil and fertilizer sources are governed by the retention and release potential of the soil, usually termed as adsorption and desorption, respectively. The aim of this study was to characterize the amount of plant available Zn at different landscape positions. During the 2018/19 cropping season, adsorption-desorption studies were carried out on soil samples collected from on-farm trials conducted at Aba Gerima, Debre Mewi and Markuma in the Amhara Region. In all locations and landscape positions, adsorption and desorption increased with increasing Zn additions. The amount of adsorption and desorption was highly associated with the soil pH, the soil organic carbon concentration and cation exchange capacity, and these factors are linked to landscape positions. The Freundlich isotherm fitted very well to Zn adsorption (r2 0.87–0.99) and desorption (r2 0.92–0.99), while the Langmuir isotherm only fitted to Zn desorption (r2 0.70–0.93). Multiple regression models developed by determining the most influential soil parameters for Zn availability could be used to inform Zn fertilizer management strategies for different locations and landscape positions in this region, and thereby improve plant Zn use efficiency.
Drought Stress Impacts on Plants and Different Approaches to Alleviate Its Adverse Effects
Authors: Seleiman Mahmoud F. , Al-Suhaibani Nasser , Ali Nawab , Akmal Mohammad , Alotaibi Majed , Refay Yahya , Dindaroglu Turgay , Abdul-Wajid Hafiz Haleem , Battaglia Martin Leonardo
Published: January 2021

Drought stress, being the inevitable factor that exists in various environments without recognizing borders and no clear warning thereby hampering plant biomass production, quality, and energy. It is the key important environmental stress that occurs due to temperature dynamics, light intensity, and low rainfall. Despite this, its cumulative, not obvious impact and multidimensional nature severely affects the plant morphological, physiological, biochemical and molecular attributes with adverse impact on photosynthetic capacity. Coping with water scarcity, plants evolve various complex resistance and adaptation mechanisms including physiological and biochemical responses, which differ with species level. The sophisticated adaptation mechanisms and regularity network that improves the water stress tolerance and adaptation in plants are briefly discussed. Growth pattern and structural dynamics, reduction in transpiration loss through altering stomatal conductance and distribution, leaf rolling, root to shoot ratio dynamics, root length increment, accumulation of compatible solutes, enhancement in transpiration efficiency, osmotic and hormonal regulation, and delayed senescence are the strategies that are adopted by plants under water deficit. Approaches for drought stress alleviations are breeding strategies, molecular and genomics perspectives with special emphasis on the omics technology alteration i.e., metabolomics, proteomics, genomics, transcriptomics, glyomics and phenomics that improve the stress tolerance in plants. For drought stress induction, seed priming, growth hormones, osmoprotectants, silicon (Si), selenium (Se) and potassium application are worth using under drought stress conditions in plants. In addition, drought adaptation through microbes, hydrogel, nanoparticles applications and metabolic engineering techniques that regulate the antioxidant enzymes activity for adaptation to drought stress in plants, enhancing plant tolerance through maintenance in cell homeostasis and ameliorates the adverse effects of water stress are of great potential in agriculture.
Recent Advances and Applications of Bacterial Cellulose in Biomedicine
Authors: Swingler Sam , Gupta Abhishek , Gibson Hazel , Kowalczuk Marek , Heaselgrave Wayne , Radecka Iza
Published: January 2021

Bacterial cellulose (BC) is an extracellular polymer produced by Komagateibacter xylinus, which has been shown to possess a multitude of properties, which makes it innately useful as a next-generation biopolymer. The structure of BC is comprised of glucose monomer units polymerised by cellulose synthase in β-1-4 glucan chains which form uniaxially orientated BC fibril bundles which measure 3–8 nm in diameter. BC is chemically identical to vegetal cellulose. However, when BC is compared with other natural or synthetic analogues, it shows a much higher performance in biomedical applications, potable treatment, nano-filters and functional applications. The main reason for this superiority is due to the high level of chemical purity, nano-fibrillar matrix and crystallinity. Upon using BC as a carrier or scaffold with other materials, unique and novel characteristics can be observed, which are all relatable to the features of BC. These properties, which include high tensile strength, high water holding capabilities and microfibrillar matrices, coupled with the overall physicochemical assets of bacterial cellulose makes it an ideal candidate for further scientific research into biopolymer development. This review thoroughly explores several areas in which BC is being investigated, ranging from biomedical applications to electronic applications, with a focus on the use as a next-generation wound dressing. The purpose of this review is to consolidate and discuss the most recent advancements in the applications of bacterial cellulose, primarily in biomedicine, but also in biotechnology.
Characterization of Bio-Inspired Electro-Conductive Soy Protein Films
Authors: Guerrero Pedro , Garrido Tania , Garcia-Orue Itxaso , Santos-Vizcaino Edorta , Igartua Manoli , Hernandez Rosa Maria , de la Caba Koro
Published: January 2021

Protein-based conductive materials are gaining attention as alternative components of electronic devices for value-added applications. In this regard, soy protein isolate (SPI) was processed by extrusion in order to obtain SPI pellets, subsequently molded into SPI films by hot pressing, resulting in homogeneous and transparent films, as shown by scanning electron microscopy and UV-vis spectroscopy analyses, respectively. During processing, SPI denatured and refolded through intermolecular interactions with glycerol, causing a major exposition of tryptophan residues and fluorescence emission, affecting charge distribution and electron transport properties. Regarding electrical conductivity, the value found (9.889 × 10−4 S/m) is characteristic of electrical semiconductors, such as silicon, and higher than that found for other natural polymers. Additionally, the behavior of the films in contact with water was analyzed, indicating a controlled swelling and a hydrolytic surface, which is of great relevance for cell adhesion and spreading. In fact, cytotoxicity studies showed that the developed SPI films were biocompatible, according to the guidelines for the biological evaluation of medical devices. Therefore, these SPI films are uniquely suited as bioelectronics because they conduct both ionic and electronic currents, which is not accessible for the traditional metallic conductors.
The Impact of AN Contribution on the Thermal Characteristics and Molecular Dynamics of Novel Acrylonitrile–Styrene–Styrene Sodium Sulfonate Terpolymers
Authors: Altaleb Hamud A. , Al-Enizi Abdullah M. , El-Hamshary Hany , Mohammady Sayed Z.
Published: January 2021

We performed a free radical solution polymerization of new acrylonitrile (AN), styrene (St) and styrene sodium sulfonate (SSS) acceptor–donor acceptor monomer systems. The compositions and structures of the produced terpolymers were elucidated using CHNS elemental analysis, and Fourier transform infrared (FTIR) spectroscopies. Three terpolymers candidates were chosen for detailed thermal investigations, where the AN molar ratio varied almost threefold (from ~6.9% to ~17.4%) while the molar ratios of St and SSS varied slightly, at average values around 76.0% and 12.9%, respectively. The glass transition (Tg) values of the terpolymers were measured calorimetrically. In addition, thermal gravimetric analyses (TGA) of the samples were conducted in the temperature range from room temperature to 800 °C. All terpolymers exhibited a single Tg value, indicating random copolymerization of the monomeric species. TGA results revealed that variation of the AN molar ratio had a significant influence on the thermal stabilities of the terpolymers. The impact of AN contribution on the molecular dynamics of the glass transition in the terpolymers was explained quantitatively in a framework of a molecular model.
Enhanced Water Resistance of Recycled Newspaper/High Density Polyethylene Composite Laminates via Hydrophobic Modification of Newspaper Laminas
Authors: Zheng Binwei , Zhang Weiwei , Guan Litao , Gu Jin , Tu Dengyun , Hu Chuanshuang
Published: January 2021

A high strength recycled newspaper (NP)/high density polyethylene (HDPE) laminated composite was developed using NP laminas as reinforcement and HDPE film as matrix. Herein, NP fiber was modified with stearic acid (SA) to enhance the water resistance of the NP laminas and NP/HDPE composite. The effects of heat treatment and SA concentration on the water resistance and tensile property of NP and composite samples were investigated. The chemical structure of the NP was characterized with X-ray diffractometer, X-ray photoelectron spectroscopy and attenuated total reflectance Fourier transform infrared spectra techniques. The surface and microstructure of the NP sheets were observed by scanning electron microscopy. An expected high-water resistance of NP sheets was achieved due to a chemical bonding that low surface energy SA were grafted onto the modified NP fibers. Results showed that the hydrophobicity of NP increased with increasing the stearic acid concentration. The water resistance of the composite laminates was depended on the hydrophobicity of the NP sheets. The lowest value of 2 h water absorption rate (3.3% ± 0.3%) and thickness swelling rate (2.2% ± 0.4%) of composite were obtained when the SA concentration was 0.15 M. In addition, the introduction of SA can not only enhance the water resistance of the composite laminates, but also reduce the loss of tensile strength in wet conditions, which shows potential in outdoor applications.
Performance Analysis of Reinforced Epoxy Functionalized Carbon Nanotubes Composites for Vertical Axis Wind Turbine Blade
Authors: Elhenawy Yasser , Fouad Yasser , Marouani Haykel , Bassyouni Mohamed
Published: January 2021

Synthetic materials using epoxy resin and woven Kevlar fiber nanocomposites were fabricated in the presence of functionalized multiwalled carbon nanotubes (F-MWCNTs). Kevlar-reinforced epoxy nanocomposites were designed to manufacture a small blade of vertical axis wind turbines (VAWT). It is important to estimate the deflection of the versatile composite turbine blades to forestall the blades from breakage. This paper investigates the effect of F-MWCNTs on mechanics and deflection of reinforced epoxy composites. The outcomes show that the mixing of F-MWCNTs with epoxy resin using a sonication process has a significant influence on the mechanical properties. Substantial improvement on the deflections was determined based on finite element analysis (FEA). The vortices from the vertical axis wind turbines (VAWTs) blades have a negative impact on power efficiency, since small blades are shown to be effective in reducing tip vortexes within the aerospace field. To support the theoretical movement of the VAWT blade, modeling calculations and analyzes were performed with the ANSYS code package to achieve insight into the sustainability of epoxy nanocomposites for turbine blade applications below aerodynamic, gravitational, and centrifugal loads. The results showed that the addition of F-MWCNTs to epoxy and Kevlar has a significant effect on the bias estimated by finite element analysis. ANSYS analysis results showed lower deflection on the blade using epoxy with an additional of 0.50 wt.% of MWCNTs-COOH at tip speed ratios of 2.1, 2.6, and 3.1.
Liquid-Phase Removal of Methylene Blue as Organic Pollutant by Mesoporous Activated Carbon Prepared from Water Caltrop Husk Using Carbon Dioxide Activation
Authors: Lin Yu-Quan , Tsai Wen-Tien
Published: January 2021

In this work, a mesoporous activated carbon (AC) was prepared from a unique lignocellulosic biomass (water caltrop husk) in triplicate using a single-step physical activation process at lower temperature (i.e., 750 °C) and longer holding time (i.e., 90 min). Based on the pore properties and adsorption properties for removal of methylene blue (MB) as organic pollutant, the results proved that the resulting AC possesses a mesoporous feature with the Brunauer–Emmett–Teller (BET) surface area of 810.5 m2/g and mesopore volume of about 0.13 cm3/g. Due to its fast adsorption rate and maximal adsorption capacity fitted (126.6 mg/g), the mesoporous carbon material could be used as an excellent adsorbent for liquid-phase removal of MB. In addition, the pseudo-second-order model is well suited for describing the adsorption system between the cationic adsorbate and the resulting AC with oxygen surface groups.
Techno-Economic Analysis of a Hyaluronic Acid Production Process Utilizing Streptococcal Fermentation
Authors: Ferreira Rafael G. , Azzoni Adriano R. , Santana Maria Helena Andrade , Petrides Demetri
Published: January 2021

Hyaluronic acid (HA) is a polysaccharide of alternating d-glucuronic acid and N-acetyl-d-glucosamine residues present in the extracellular matrix of connective, epithelial, and nervous tissues. Due to its singular hydrating, rheological and adhesive properties, HA has found numerous cosmetic and medical applications. However, techno-economic analyses of high value-added bioproducts such as HA are scarce in the literature. Here, we present a techno-economic analysis of a process for producing HA using Streptococcus zooepidemicus, simulated in SuperPro Designer. In the baseline scenario, HA is produced by batch fermentation, reaching 2.5 g/L after 24 h. It is then centrifuged, diafiltered, treated with activated carbon and precipitated with isopropanol. The product is suitable for topical formulations and its production cost was estimated as 1115 $/kg. A similar scenario, based on fed-batch culture and assuming a titer of 5.0 g/L, led to a lower cost of 946 $/kg. Moreover, in two additional scenarios, 10% of the precipitated HA is diverted to the production of a highly pure and high-molecular weight HA, suitable for injectable applications. These scenarios resulted in higher capital and operating costs, but also in higher profits, because HA for injectable use has a higher selling price that more than compensates for its higher production costs.
Acknowledgment to Reviewers of Proteomes in 2020
Authors:   Proteomes Editorial Office
Published: January 2021

Peer review is the driving force of journal development, and reviewers are gatekeepers who ensure that Proteomes maintains its standards for the high quality of its published papers [...]
Disentangling Domestication from Food Production Systems in the Neotropics
Authors: Clement Charles R. , Casas Alejandro , Parra-Rondinel Fabiola Alexandra , Levis Carolina , Peroni Nivaldo , Hanazaki Natalia , Cortés-Zárraga Laura , Rangel-Landa Selene , Alves Rubana Palhares , Ferreira Maria Julia , Cassino Mariana Franco , Coelho Sara Deambrozi , Cruz-Soriano Aldo , Pancorbo-Olivera Marggiori , Blancas José , Martínez-Ballesté Andrea , Lemes Gustavo , Lotero-Velásquez Elisa , Bertin Vinicius Mutti , Mazzochini Guilherme Gerhardt
Published: January 2021

The Neolithic Revolution narrative associates early-mid Holocene domestications with the development of agriculture that fueled the rise of late Holocene civilizations. This narrative continues to be influential, even though it has been deconstructed by archaeologists and geneticists in its homeland. To further disentangle domestication from reliance on food production systems, such as agriculture, we revisit definitions of domestication and food production systems, review the late Pleistocene–early Holocene archaeobotanical record, and quantify the use, management and domestication of Neotropical plants to provide insights about the past. Neotropical plant domestication relies on common human behaviors (selection, accumulation and caring) within agroecological systems that focus on individual plants, rather than populations—as is typical of agriculture. The early archaeobotanical record includes numerous perennial and annual species, many of which later became domesticated. Some of this evidence identifies dispersal with probable cultivation, suggesting incipient domestication by 10,000 years ago. Since the Pleistocene, more than 6500, 1206 and 6261 native plant species have been used in Mesoamerica, the Central Andes and lowland South America, respectively. At least 1555, 428 and 742 are managed outside and inside food production systems, and at least 1148, 428 and 600 are cultivated, respectively, suggesting at least incipient domestication. Full native domesticates are more numerous in Mesoamerica (251) than the Andes (124) and the lowlands (45). This synthesis reveals that domestication is more common in the Neotropics than previously recognized and started much earlier than reliance on food production systems. Hundreds of ethnic groups had, and some still have, alternative strategies that do involve domestication, although they do not rely principally on food production systems, such as agriculture.
A Novel Deeplabv3+ Network for SAR Imagery Semantic Segmentation Based on the Potential Energy Loss Function of Gibbs Distribution
Authors: Kong Yingying , Liu Yanjuan , Yan Biyuan , Leung Henry , Peng Xiangyang
Published: January 2021

Synthetic aperture radar (SAR) provides rich information about the Earth’s surface under all-weather and day-and-night conditions, and is applied in many relevant fields. SAR imagery semantic segmentation, which can be a final product for end users and a fundamental procedure to support other applications, is one of the most difficult challenges. This paper proposes an encoding-decoding network based on Deeplabv3+ to semantically segment SAR imagery. A new potential energy loss function based on the Gibbs distribution is proposed here to establish the semantic dependence among different categories through the relationship among different cliques in the neighborhood system. This paper introduces an improved channel and spatial attention module to the Mobilenetv2 backbone to improve the recognition accuracy of small object categories in SAR imagery. The experimental results show that the proposed method achieves the highest mean intersection over union (mIoU) and global accuracy (GA) with the least running time, which verifies the effectiveness of our method.
Drivers of Bornean Orangutan Distribution across a Multiple-Use Tropical Landscape
Authors: Milne Sol , Martin Julien G. A. , Reynolds Glen , Vairappan Charles S. , Slade Eleanor M. , Brodie Jedediah F. , Wich Serge A. , Williamson Nicola , Burslem David F. R. P.
Published: January 2021

Logging and conversion of tropical forests in Southeast Asia have resulted in the expansion of landscapes containing a mosaic of habitats that may vary in their ability to sustain local biodiversity. However, the complexity of these landscapes makes it difficult to assess abundance and distribution of some species using ground-based surveys alone. Here, we deployed a combination of ground-transects and aerial surveys to determine drivers of the critically endangered Bornean Orangutan (Pongo pygmaeus morio) distribution across a large multiple-use landscape in Sabah, Malaysian Borneo. Ground-transects and aerial surveys using drones were conducted for orangutan nests and hemi-epiphytic strangler fig trees (Ficus spp.) (an important food resource) in 48 survey areas across 76 km2, within a study landscape of 261 km2. Orangutan nest count data were fitted to models accounting for variation in land use, above-ground carbon density (ACD, a surrogate for forest quality), strangler fig density, and elevation (between 117 and 675 m). Orangutan nest counts were significantly higher in all land uses possessing natural forest cover, regardless of degradation status, than in monoculture plantations. Within these natural forests, nest counts increased with higher ACD and strangler fig density, but not with elevation. In logged forest (ACD 14–150 Mg ha−1), strangler fig density had a significant, positive relationship with orangutan nest counts, but this relationship disappeared in a forest with higher carbon content (ACD 150–209 Mg ha−1). Based on an area-to-area comparison, orangutan nest counts from ground transects were higher than from counts derived from aerial surveys, but this did not constitute a statistically significant difference. Although the difference in nest counts was not significantly different, this analysis indicates that both methods under-sample the total number of nests present within a given area. Aerial surveys are, therefore, a useful method for assessing the orangutan habitat use over large areas. However, the under-estimation of nest counts by both methods suggests that a small number of ground surveys should be retained in future surveys using this technique, particularly in areas with dense understory vegetation. This study shows that even highly degraded forests may be a suitable orangutan habitat as long as strangler fig trees remain intact after areas of forest are logged. Enrichment planting of strangler figs may, therefore, be a valuable tool for orangutan conservation in these landscapes.
Road Extraction from Remote Sensing Images Using the Inner Convolution Integrated Encoder-Decoder Network and Directional Conditional Random Fields
Authors: Wang Shuyang , Mu Xiaodong , Yang Dongfang , He Hao , Zhao Peng
Published: January 2021

Road extraction from remote sensing images is of great significance to urban planning, navigation, disaster assessment, and other applications. Although deep neural networks have shown a strong ability in road extraction, it remains a challenging task due to complex circumstances and factors such as occlusion. To improve the accuracy and connectivity of road extraction, we propose an inner convolution integrated encoder-decoder network with the post-processing of directional conditional random fields. Firstly, we design an inner convolutional network which can propagate information slice-by-slice within feature maps, thus enhancing the learning of road topology and linear features. Additionally, we present the directional conditional random fields to improve the quality of the extracted road by adding the direction of roads to the energy function of the conditional random fields. The experimental results on the Massachusetts road dataset show that the proposed approach achieves high-quality segmentation results, with the F1-score of 84.6%, which outperforms other comparable “state-of-the-art” approaches. The visualization results prove that the proposed approach is able to effectively extract roads from remote sensing images and can solve the road connectivity problem produced by occlusions to some extent.
Complex Pignistic Transformation-Based Evidential Distance for Multisource Information Fusion of Medical Diagnosis in the IoT
Authors: Xiao Fuyuan
Published: January 2021

Multisource information fusion has received much attention in the past few decades, especially for the smart Internet of Things (IoT). Because of the impacts of devices, the external environment, and communication problems, the collected information may be uncertain, imprecise, or even conflicting. How to handle such kinds of uncertainty is still an open issue. Complex evidence theory (CET) is effective at disposing of uncertainty problems in the multisource information fusion of the IoT. In CET, however, how to measure the distance among complex basis belief assignments (CBBAs) to manage conflict is still an open issue, which is a benefit for improving the performance in the fusion process of the IoT. In this paper, therefore, a complex Pignistic transformation function is first proposed to transform the complex mass function; then, a generalized betting commitment-based distance (BCD) is proposed to measure the difference among CBBAs in CET. The proposed BCD is a generalized model to offer more capacity for measuring the difference among CBBAs. Additionally, other properties of the BCD are analyzed, including the non-negativeness, nondegeneracy, symmetry, and triangle inequality. Besides, a basis algorithm and its weighted extension for multi-attribute decision-making are designed based on the newly defined BCD. Finally, these decision-making algorithms are applied to cope with the medical diagnosis problem under the smart IoT environment to reveal their effectiveness.