bluuebunny/crossref_metadata_2025 huggingface dataset:
The MST/Hippo Pathway and Cell Death: A Non-Canonical Affair
Authors: Fallahi Emma , O’Driscoll Niamh , Matallanas David
Published: June 2016

The MST/Hippo signalling pathway was first described over a decade ago in Drosophila melanogaster and the core of the pathway is evolutionary conserved in mammals. The mammalian MST/Hippo pathway regulates organ size, cell proliferation and cell death. In addition, it has been shown to play a central role in the regulation of cellular homeostasis and it is commonly deregulated in human tumours. The delineation of the canonical pathway resembles the behaviour of the Hippo pathway in the fly where the activation of the core kinases of the pathway prevents the proliferative signal mediated by the key effector of the pathway YAP. Nevertheless, several lines of evidence support the idea that the mammalian MST/Hippo pathway has acquired new features during evolution, including different regulators and effectors, crosstalk with other essential signalling pathways involved in cellular homeostasis and the ability to actively trigger cell death. Here we describe the current knowledge of the mechanisms that mediate MST/Hippo dependent cell death, especially apoptosis. We include evidence for the existence of complex signalling networks where the core proteins of the pathway play a central role in controlling the balance between survival and cell death. Finally, we discuss the possible involvement of these signalling networks in several human diseases such as cancer, diabetes and neurodegenerative disorders.
Role of Telomerase in the Cardiovascular System
Authors: Zurek Mark , Altschmied Joachim , Kohlgrüber Stefanie , Ale-Agha Niloofar , Haendeler Judith
Published: June 2016

Aging is one major risk factor for the incidence of cardiovascular diseases and the development of atherosclerosis. One important enzyme known to be involved in aging processes is Telomerase Reverse Transcriptase (TERT). After the discovery of the enzyme in humans, TERT had initially only been attributed to germ line cells, stem cells and cancer cells. However, over the last few years it has become clear that TERT is also active in cells of the cardiovascular system including cardiac myocytes, endothelial cells, smooth muscle cells and fibroblasts. Interference with the activity of this enzyme greatly contributes to cardiovascular diseases. This review will summarize the findings on the role of TERT in cardiovascular cells. Moreover, recent findings concerning TERT in different mouse models with respect to cardiovascular diseases will be described. Finally, the extranuclear functions of TERT will be covered within this review.
Identification of Streamflow Changes across the Continental United States Using Variable Record Lengths
Authors: Tamaddun Kazi , Kalra Ajay , Ahmad Sajjad
Published: June 2016

The study focused on investigating the presence of change patterns in 600 unimpaired streamflow stations across the continental U.S. at different time intervals to understand the change patterns that can provide significant insight regarding climate variability and change. Each station had continuous streamflow data of at least 30 years (the entire dataset covered a range of 109 years). Presence of trends and shifts were detected in water year and the four seasons (fall, winter, spring, and summer) analyzing the water year and seasonal mean flows. Two non-parametric tests, namely, the Mann-Kendall test and the Pettitt’s test were used to identify the trends and the shifts, respectively. The results showed an increasing trend in the northeast and upper-mid regions, whereas southeast and northwest regions underwent a decrease. Shifts followed similar patterns as trends with higher number of stations with significant change. Fall and spring showed the highest number of stations with increasing and decreasing change, respectively, in the seasonal analyses. Results of this study may assist water managers to understand the streamflow change patterns across the continental U.S., especially at the regional scale since this study covers a long range of years with a large number of stations in each region.
Interactions of Methylenetetrahydrofolate Reductase C677T Polymorphism with Environmental Factors on Hypertension Susceptibility
Authors: Fan Shujun , Yang Boyi , Zhi Xueyuan , Wang Yanxun , Wei Jian , Zheng Quanmei , Sun Guifan
Published: June 2016

Hypertension is considered to be the result of genes, environment, and their interactions. Among them age, sex, tobacco use, alcohol consumption, and being overweight/obesity are well documented environmental determinants, and methylenetetrahydrofolate reductase (MTHFR) C677T polymorphism is nominated as a potential genetic candidate. However, the synergistic effect of the MTHFR C677T polymorphism with these environmental factors on the risk of hypertension has received little attention. The aim of this study was to explore the associations of the MTHFR C677T polymorphism, environmental factors, and their interactions with hypertension predisposition in a Northern Chinese Han population. A total of 708 participants were enrolled in the study. The genotypes of the MTHFR C677T were determined by a TaqMan assay. We found that participants of an older age, being overweight/obesity, with a smoking habit, drinking habit, or carrying the 677T allele were at an increased risk of hypertension. Additionally, there existed marginally significant interactions of the polymorphism with age and overweight/obesity. However, future large, well-designed studies in Chinese and other populations, as well as mechanistic studies, are still needed to validate our findings, especially considering that the interactions observed in our study were only marginally significant.
Activated Persulfate Oxidation of Perfluorooctanoic Acid (PFOA) in Groundwater under Acidic Conditions
Authors: Yin Penghua , Hu Zhihao , Song Xin , Liu Jianguo , Lin Na
Published: June 2016

Perfluorooctanoic acid (PFOA) is an emerging contaminant of concern due to its toxicity for human health and ecosystems. However, successful degradation of PFOA in aqueous solutions with a cost-effective method remains a challenge, especially for groundwater. In this study, the degradation of PFOA using activated persulfate under mild conditions was investigated. The impact of different factors on persulfate activity, including pH, temperature (25 °C–50 °C), persulfate dosage and reaction time, was evaluated under different experimental conditions. Contrary to the traditional alkaline-activated persulfate oxidation, it was found that PFOA can be effectively degraded using activated persulfate under acidic conditions, with the degradation kinetics following the pseudo-first-order decay model. Higher temperature, higher persulfate dosage and increased reaction time generally result in higher PFOA degradation efficiency. Experimental results show that a PFOA degradation efficiency of 89.9% can be achieved by activated persulfate at pH of 2.0, with the reaction temperature of 50 °C, molar ratio of PFOA to persulfate as 1:100, and a reaction time of 100 h. The corresponding defluorination ratio under these conditions was 23.9%, indicating that not all PFOA decomposed via fluorine removal. The electron paramagnetic resonance spectrometer analysis results indicate that both SO4−• and •OH contribute to the decomposition of PFOA. It is proposed that PFOA degradation occurs via a decarboxylation reaction triggered by SO4−•, followed by a HF elimination process aided by •OH, which produces one-CF2-unit-shortened perfluoroalkyl carboxylic acids (PFCAs, Cn−1F2n−1COOH). The decarboxylation and HF elimination processes would repeat and eventually lead to the complete mineralization all PFCAs.
Analysis of Risk Factors Associated with the Development of Hepatocellular Carcinoma in Chronic HBV-Infected Chinese: A Meta-Analysis
Authors: Lyu Xiang , Liu Kui , Chen Yongdi , Wang Zhifang , Yao Jun , Cai Gaofeng , Jiang Zhenggang , Wang Zhengting , Jiang Jianmin , Gu Hua
Published: June 2016

Hepatitis B virus (HBV) infection is a major risk factor for the development of hepatocellular carcinoma (HCC) in China. At present, there still are 9.3 million chronic HBV-infected Chinese. Numerous studies have explored the association between possible factors and hepatocellular carcinoma risk, however, the results remains inconsistent. Therefore, we did this pooled analysis so as to get a precise result. Here, we took the chronic HBV-infected Chinese as the object. We systematically searched for studies evaluating whether the proposed factors changed HCC risk in PubMed, Chinese National Knowledge Infrastructure, VIP database and Wanfang data. Odds ratios (OR) with 95% confidence intervals (CI) were calculated by Review Manager 5.0 and publication bias was determined by Begg’s test and Egger’s test. In total, 3165 cases and 10,896 controls from 27 studies were included in this meta-analysis. Our results showed that pooled OR with 95% CI for each of the factors investigated were: non-antiviral treatment 2.70 (2.01, 3.62), high HBV DNA levels 2.61 (1.73, 3.94), alcohol consumption 2.19 (1.53, 3.13), a family history of HCC 3.58 (2.53, 5.06) and male gender 2.14 (1.68, 2.73), respectively. Our meta-analysis supports that high HBV DNA levels, non-antiviral treatment, alcohol consumption, a family history of HCC and male gender contributed to the risk of hepatocellular carcinoma in chronic HBV-infected Chinese from currently available evidence. Given the high prevalence of the non-antiviral treatment and alcohol drinking, behavior interventions for the two factors should be tackled first.
Genome-Wide Discriminatory Information Patterns of Cytosine DNA Methylation
Authors: Sanchez Robersy , Mackenzie Sally
Published: June 2016

Cytosine DNA methylation (CDM) is a highly abundant, heritable but reversible chemical modification to the genome. Herein, a machine learning approach was applied to analyze the accumulation of epigenetic marks in methylomes of 152 ecotypes and 85 silencing mutants of Arabidopsis thaliana. In an information-thermodynamics framework, two measurements were used: (1) the amount of information gained/lost with the CDM changes I R and (2) the uncertainty of not observing a SNP L C R . We hypothesize that epigenetic marks are chromosomal footprints accounting for different ontogenetic and phylogenetic histories of individual populations. A machine learning approach is proposed to verify this hypothesis. Results support the hypothesis by the existence of discriminatory information (DI) patterns of CDM able to discriminate between individuals and between individual subpopulations. The statistical analyses revealed a strong association between the topologies of the structured population of Arabidopsis ecotypes based on I R and on LCR, respectively. A statistical-physical relationship between I R and L C R was also found. Results to date imply that the genome-wide distribution of CDM changes is not only part of the biological signal created by the methylation regulatory machinery, but ensures the stability of the DNA molecule, preserving the integrity of the genetic message under continuous stress from thermal fluctuations in the cell environment.
Human Milk Cells Contain Numerous miRNAs that May Change with Milk Removal and Regulate Multiple Physiological Processes
Authors: Alsaweed Mohammed , Lai Ching , Hartmann Peter , Geddes Donna , Kakulas Foteini
Published: June 2016

Human milk (HM) is a complex biofluid conferring nutritional, protective and developmental components for optimal infant growth. Amongst these are maternal cells, which change in response to feeding and were recently shown to be a rich source of miRNAs. We used next generation sequencing to characterize the cellular miRNA profile of HM collected before and after feeding. HM cells conserved higher miRNA content than the lipid and skim HM fractions or other body fluids, in accordance with previous studies. In total, 1467 known mature and 1996 novel miRNAs were identified, with 89 high-confidence novel miRNAs. HM cell content was higher post-feeding (p < 0.05), and was positively associated with total miRNA content (p = 0.014) and species number (p < 0.001). This coincided with upregulation of 29 known and 2 novel miRNAs, and downregulation of 4 known and 1 novel miRNAs post-feeding, but no statistically significant change in expression was found for the remaining miRNAs. These findings suggest that feeding may influence the miRNA content of HM cells. The most highly and differentially expressed miRNAs were key regulators of milk components, with potential diagnostic value in lactation performance. They are also involved in the control of body fluid balance, thirst, appetite, immune response, and development, implicating their functional significance for the infant.
Aquaporins in Urinary Extracellular Vesicles (Exosomes)
Authors: Oshikawa Sayaka , Sonoda Hiroko , Ikeda Masahiro
Published: June 2016

Since the successful characterization of urinary extracellular vesicles (uEVs) by Knepper’s group in 2004, these vesicles have been a focus of intense basic and translational research worldwide, with the aim of developing novel biomarkers and therapeutics for renal disease. Along with these studies, there is growing evidence that aquaporins (AQPs), water channel proteins, in uEVs have the potential to be diagnostically useful. In this review, we highlight current knowledge of AQPs in uEVs from their discovery to clinical application.
MicroRNA Expression Profiling in CCl4-Induced Liver Fibrosis of Mus musculus
Authors: Hyun Jeongeun , Park Jungwook , Wang Sihyung , Kim Jieun , Lee Hyun-Hee , Seo Young-Su , Jung Youngmi
Published: June 2016

Liver fibrosis is a major pathological feature of chronic liver diseases, including liver cancer. MicroRNAs (miRNAs), small noncoding RNAs, regulate gene expression posttranscriptionally and play important roles in various kinds of diseases; however, miRNA-associated hepatic fibrogenesis and its acting mechanisms are poorly investigated. Therefore, we performed an miRNA microarray in the fibrotic livers of Mus musculus treated with carbon-tetrachloride (CCl4) and analyzed the biological functions engaged by the target genes of differentially-expressed miRNAs through gene ontology (GO) and in-depth pathway enrichment analysis. Herein, we found that four miRNAs were upregulated and four miRNAs were downregulated more than two-fold in CCl4-treated livers compared to a control liver. Eight miRNAs were predicted to target a total of 4079 genes. GO analysis revealed that those target genes were located in various cellular compartments, including cytoplasm, nucleolus and cell surface, and they were involved in protein-protein or protein-DNA bindings, which influence the signal transductions and gene transcription. Furthermore, pathway enrichment analysis demonstrated that the 72 subspecialized signaling pathways were associated with CCl4-induced liver fibrosis and were mostly classified into metabolic function-related pathways. These results suggest that CCl4 induces liver fibrosis by disrupting the metabolic pathways. In conclusion, we presented several miRNAs and their biological processes that might be important in the progression of liver fibrosis; these findings help increase the understanding of liver fibrogenesis and provide novel ideas for further studies of the role of miRNAs in liver fibrosis.
The Potential for Microalgae as Bioreactors to Produce Pharmaceuticals
Authors: Yan Na , Fan Chengming , Chen Yuhong , Hu Zanmin
Published: June 2016

As photosynthetic organisms, microalgae can efficiently convert solar energy into biomass. Microalgae are currently used as an important source of valuable natural biologically active molecules, such as carotenoids, chlorophyll, long-chain polyunsaturated fatty acids, phycobiliproteins, carotenoids and enzymes. Significant advances have been achieved in microalgae biotechnology over the last decade, and the use of microalgae as bioreactors for expressing recombinant proteins is receiving increased interest. Compared with the bioreactor systems that are currently in use, microalgae may be an attractive alternative for the production of pharmaceuticals, recombinant proteins and other valuable products. Products synthesized via the genetic engineering of microalgae include vaccines, antibodies, enzymes, blood-clotting factors, immune regulators, growth factors, hormones, and other valuable products, such as the anticancer agent Taxol. In this paper, we briefly compare the currently used bioreactor systems, summarize the progress in genetic engineering of microalgae, and discuss the potential for microalgae as bioreactors to produce pharmaceuticals.
Combination of Methoprene and Controlled Aeration to Manage Insects in Stored Wheat
Authors: Liu Samuel , Arthur Frank , VanGundy Douglas , Phillips Thomas
Published: June 2016

A commercial formulation of the insect growth regulator methoprene was applied to wheat stored in small bins either alone or in combination with controlled aeration of the bins, to lower grain temperature for insect pest management of stored wheat. Grain temperatures were monitored and modified by a computer-controlled thermocouple system that also activated the aeration system at programmed set-points to move cool ambient air through the grain mass to lower grain temperature. Results from sampling insect populations in experimental storage bins along with laboratory mortality bioassays of insects placed on wheat taken from the bins over the course of the storage period showed that methoprene was very effective in controlling infestation by the externally-feeding stored grain insects Plodia interpunctella (Hübner), the Indian meal moth Tribolium castaneum (Herbst), the red flour beetle, Cryptolestes ferrugineus (Stephens), the rusty grain beetle, and also for the internal-feeding pest Rhyzopertha dominica( Fauvel), the lesser grain borer. Methoprene did not give good control of the internal-feeding pest Sitophilus oryzae (L.), the rice weevil. Aeration alone was somewhat effective in suppressing insect population development, while methoprene alone or when combined with aeration greatly enhanced insect control. Commercial grain grading for industry quality standards at the end of the storage period confirmed the impact of insect suppression on maintaining high quality of the stored wheat. This field experiment shows that methoprene combined with aeration to cool grain can be effective for pest management of stored wheat in the southern plains of the United States of America.
Mixed Verbs in Code-Switching: The Syntax of Light Verbs
Authors: Shim Ji
Published: June 2016

This study investigates word order variation in Korean-English and Japanese-English code-switching, with specific focus on the relative placement of the object and the verb in two contrasting word orders, Object-Verb (OV) vs. Verb-Object (VO). The results of an experiment eliciting code-switching judgment data provides strong evidence indicating that the distinction between heavy vs. light verbs plays a major role in deriving different word orders in mixed verb constructions in Korean-English and Japanese-English code-switching. In particular, an explanation pursued in this research supports the hypothesis that parametric variation is attributed to differences in the features of a functional category in the lexicon, as assumed in Minimalist Syntax.
Dedifferentiated Human Articular Chondrocytes Redifferentiate to a Cartilage-Like Tissue Phenotype in a Poly(ε-Caprolactone)/Self-Assembling Peptide Composite Scaffold
Authors: Recha-Sancho Lourdes , Moutos Franklin , Abellà Jordi , Guilak Farshid , Semino Carlos
Published: June 2016

Adult articular cartilage has a limited capacity for growth and regeneration and, with injury, new cellular or biomaterial-based therapeutic platforms are required to promote repair. Tissue engineering aims to produce cartilage-like tissues that recreate the complex mechanical and biological properties found in vivo. In this study, a unique composite scaffold was developed by infiltrating a three-dimensional (3D) woven microfiber poly (ε-caprolactone) (PCL) scaffold with the RAD16-I self-assembling nanofibers to obtain multi-scale functional and biomimetic tissue-engineered constructs. The scaffold was seeded with expanded dedifferentiated human articular chondrocytes and cultured for four weeks in control and chondrogenic growth conditions. The composite constructs were compared to control constructs obtained by culturing cells with 3D woven PCL scaffolds or RAD16-I independently. High viability and homogeneous cell distribution were observed in all three scaffolds used during the term of the culture. Moreover, gene and protein expression profiles revealed that chondrogenic markers were favored in the presence of RAD16-I peptide (PCL/RAD composite or alone) under chondrogenic induction conditions. Further, constructs displayed positive staining for toluidine blue, indicating the presence of synthesized proteoglycans. Finally, mechanical testing showed that constructs containing the PCL scaffold maintained the initial shape and viscoelastic behavior throughout the culture period, while constructs with RAD16-I scaffold alone contracted during culture time into a stiffer and compacted structure. Altogether, these results suggest that this new composite scaffold provides important mechanical requirements for a cartilage replacement, while providing a biomimetic microenvironment to re-establish the chondrogenic phenotype of human expanded articular chondrocytes.
A Review on Electroactive Polymers for Waste Heat Recovery
Authors: Kolasińska Ewa , Kolasiński Piotr
Published: June 2016

This paper reviews materials for thermoelectric waste heat recovery, and discusses selected industrial and distributed waste heat sources as well as recovery methods that are currently applied. Thermoelectric properties, especially electrical conductivity, thermopower, thermal conductivity and the thermoelectric figures of merit, are considered when evaluating thermoelectric materials for waste heat recovery. Alloys and oxides are briefly discussed as materials suitable for medium- and high-grade sources. Electroactive polymers are presented as a new group of materials for low-grade sources. Polyaniline is a particularly fitting polymer for these purposes. We also discuss types of modifiers and modification methods, and their influence on the thermoelectric performance of this class of polymers.
Absorption and Transport of Sea Cucumber Saponins from Apostichopus japonicus
Authors: Li Shuai , Wang Yuanhong , Jiang Tingfu , Wang Han , Yang Shuang , Lv Zhihua
Published: June 2016

The present study is focused on the intestinal absorption of sea cucumber saponins. We determined the pharmacokinetic characteristics and bioavailability of Echinoside A and Holotoxin A1; the findings indicated that the bioavailability of Holotoxin A1 was lower than Echinoside A. We inferred that the differences in chemical structure between compounds was a factor that explained their different characteristics of transport across the intestine. In order to confirm the absorption characteristics of Echinoside A and Holotoxin A1, we examined their transport across Caco-2 cell monolayer and effective permeability by single-pass intestinal perfusion. The results of Caco-2 cell model indicate that Echinoside A is transported by passive diffusion, and not influenced by the exocytosis of P-glycoprotein (P-gp, expressed in the apical side of Caco-2 monolayers as the classic inhibitor). The intestinal perfusion also demonstrated well the absorption of Echinoside A and poor absorption of Holotoxin A1, which matched up with the result of the Caco-2 cell model. The results demonstrated our conjecture and provides fundamental information on the relationship between the chemical structure of these sea cucumber saponins and their absorption characteristics, and we believe that our findings build a foundation for the further metabolism study of sea cucumber saponins and contribute to the further clinical research of saponins.
Pharmacokinetics in Mouse and Comparative Effects of Frondosides in Pancreatic Cancer
Authors: Al Shemaili Jasem , Parekh Khatija , Newman Robert , Hellman Björn , Woodward Carl , Adem Abdu , Collin Peter , Adrian Thomas
Published: June 2016

The frondosides are triterpenoid glycosides from the Atlantic sea cucumber Cucumaria frondosa. Frondoside A inhibits growth, invasion, metastases and angiogenesis and induces apoptosis in diverse cancer types, including pancreatic cancer. We compared the growth inhibitory effects of three frondosides and their aglycone and related this to the pharmocokinetics and route of administration. Frondoside A potently inhibited growth of pancreatic cancer cells with an EC50 of ~1 µM. Frondoside B was less potent (EC50 ~2.5 µM). Frondoside C and the aglycone had no effect. At 100 µg/kg, frondoside A administered to CD2F1 mice as an i.v. bolus, the Cpmax was 129 nM, Cltb was 6.35 mL/min/m2, and half-life was 510 min. With i.p. administration the Cpmax was 18.3 nM, Cltb was 127 mL/min/m2 and half-life was 840 min. Oral dosing was ineffective. Frondoside A (100 µg/kg/day i.p.) markedly inhibited growth cancer xenografts in nude mice. The same dose delivered by oral gavage had no effect. No evidence of acute toxicity was seen with frondoside A. Frondoside A is more potent inhibitor of cancer growth than other frondosides. The glycoside component is essential for bioactivity. Frondoside A is only effective when administered systemically. Based on the current and previous studies, frondoside A appears safe and may be valuable in the treatment of cancer.
Bioprospecting the Curculigoside-Cinnamic Acid-Rich Fraction from Molineria latifolia Rhizome as a Potential Antioxidant Therapeutic Agent
Authors: Ooi Der , Chan Kim , Sarega Nadarajan , Alitheen Noorjahan , Ithnin Hairuszah , Ismail Maznah
Published: June 2016

Increasing evidence from both experimental and clinical studies depicts the involvement of oxidative stress in the pathogenesis of various diseases. Specifically, disruption of homeostatic redox balance in accumulated body fat mass leads to obesity-associated metabolic syndrome. Strategies for the restoration of redox balance, potentially by exploring potent plant bioactives, have thus become the focus of therapeutic intervention. The present study aimed to bioprospect the potential use of the curculigoside-cinnamic acid-rich fraction from Molineria latifolia rhizome as an antioxidant therapeutic agent. The ethyl acetate fraction (EAF) isolated from M. latifolia rhizome methanolic extract (RME) contained the highest amount of phenolic compounds, particularly curculigoside and cinnamic acid. EAF demonstrated glycation inhibitory activities in both glucose- and fructose-mediated glycation models. In addition, in vitro chemical-based and cellular-based antioxidant assays showed that EAF exhibited high antioxidant activities and a protective effect against oxidative damage in 3T3-L1 preadipocytes. Although the efficacies of individual phenolics differed depending on the structure and concentration, a correlational study revealed strong correlations between total phenolic contents and antioxidant capacities. The results concluded that enriched phenolic contents in EAF (curculigoside-cinnamic acid-rich fraction) contributed to the overall better reactivity. Our data suggest that this bioactive-rich fraction warrants therapeutic potential against oxidative stress-related disorders.
Two Trichothecene Mycotoxins from Myrothecium roridum Induce Apoptosis of HepG-2 Cells via Caspase Activation and Disruption of Mitochondrial Membrane Potential
Authors: Ye Wei , Chen Yuchan , Li Haohua , Zhang Weimin , Liu Hongxin , Sun Zhanghua , Liu Taomei , Li Saini
Published: June 2016

Trichothecene mycotoxins are a type of sesquiterpenoid produced by various kinds of plantpathogenic fungi. In this study, two trichothecene toxins, namely, a novel cytotoxic epiroridin acid and a known trichothecene, mytoxin B, were isolated from the endophytic fungus Myrothecium roridum derived from the medicinal plant Pogostemon cablin. The two trichothecene mytoxins were confirmed to induce the apoptosis of HepG-2 cells by cytomorphology inspection, DNA fragmentation detection, and flow cytometry assay. The cytotoxic mechanisms of the two mycotoxins were investigated by quantitative real time polymerase chain reaction, western blot, and detection of mitochondrial membrane potential. The results showed that the two trichothecene mycotoxins induced the apoptosis of cancer cell HepG-2 via activation of caspase-9 and caspase-3, up-regulation of bax gene expression, down-regulation of bcl-2 gene expression, and disruption of the mitochondrial membrane potential of the HepG-2 cell. This study is the first to report on the cytotoxic mechanism of trichothecene mycotoxins from M. roridum. This study provides new clues for the development of attenuated trichothecene toxins in future treatment of liver cancer.
Synthesis of a Conjugated D-A Polymer with Bi(disilanobithiophene) as a New Donor Component
Authors: Nakashima Makoto , Ooyama Yousuke , Sugiyama Takuya , Naito Hiroyoshi , Ohshita Joji
Published: June 2016

A new conjugated donor-acceptor (D-A) polymer pDSBT2-BT containing bi(disilano-bisthiophene) and benzothiadiazole as donor and acceptor units, respectively, was prepared. The polymer showed a broad UV-vis absorption band at λmax = 599 nm in chlorobenzene. The absorption band was shifted to λmax = 629 nm when the polymer was measured as a film, indicating enhanced interchain interactions of the polymer. Bulk hetero-junction polymer solar cells (BHJ-PSCs) were fabricated using pDSBT2-BT and PC71BM as host and guest materials, respectively. Optimization of cell fabrication conditions provided a maximal power conversion efficiency of 3.3% and the following cell parameters: Voc = 0.86 V, Jsc = 7.56 mA/cm2, and FF = 0.51. Although the efficiency still leaves much to be desired, these data underscore the potential of pDSBT2-BT as a high-voltage polymer solar cell material.
Stepping up Open Science Training for European Research
Authors: Schmidt Birgit , Orth Astrid , Franck Gwen , Kuchma Iryna , Knoth Petr , Carvalho José
Published: June 2016

Open science refers to all things open in research and scholarly communication: from publications and research data to code, models and methods as well as quality evaluation based on open peer review. However, getting started with implementing open science might not be as straightforward for all stakeholders. For example, what do research funders expect in terms of open access to publications and/or research data? Where and how to publish research data? How to ensure that research results are reproducible? These are all legitimate questions and, in particular, early career researchers may benefit from additional guidance and training. In this paper we review the activities of the European-funded FOSTER project which organized and supported a wide range of targeted trainings for open science, based on face-to-face events and on a growing suite of e-learning courses. This article reviews the approach and experiences gained from the first two years of the project.
Analysis of Aerosol Radiative Forcing over Beijing under Different Air Quality Conditions Using Ground-Based Sun-Photometers between 2013 and 2015
Authors: Chen Wei , Yan Lei , Ding Nan , Xie Mengdie , Lu Ming , Zhang Fan , Duan Yongxu , Zong Shuo
Published: June 2016

Aerosol particles can strongly affect both air quality and the radiation budget of the atmosphere. Above Beijing, the capital city of China, large amounts of aerosols within the atmospheric column have caused the deterioration of local air quality and have influenced radiative forcings at both the top and the bottom of the atmosphere (BOA and TOA). Observations of aerosol radiative forcing and its efficiency have been made using two sun-photometers in urban Beijing between 2013 and 2015, and have been analyzed alongside two air quality monitoring stations’ data by dividing air quality conditions into unpolluted, moderately polluted, and heavily polluted days. Daily average PM2.5 concentrations varied greatly in urban Beijing (5.5–485.0 µg/m3) and more than one-third of the analyzed period is classified as being polluted according to the national ambient air quality standards of China. The heavily polluted days had the largest bottom of atmosphere (BOA) and top of atmosphere (TOA) radiative forcings, but the smallest radiative forcing efficiencies, while the unpolluted days showed the opposite characteristics. On heavily polluted days, the averaged BOA aerosol radiative forcing occasionally exceeded −150 W/m2, which represents a value about three-times greater than that for unpolluted days. BOA aerosol radiative forcing was around two-to-three times as large as TOA aerosol radiative forcing under various air quality conditions, although both were mostly negative, suggesting that aerosols had different magnitudes of cooling effects at both the surface and the top of the atmosphere. Unpolluted days had the largest average values of aerosol radiative forcing efficiencies at BOA (and TOA) levels, which exceeded −190 W/m2 (−70 W/m2), compared with the lowest average values in heavily polluted days of around −120 W/m2 (−55 W/m2). These results suggest that the high concentrations of particulate matter pollution in the urban Beijing area had a strong cooling effect at both BOA and TOA levels.
Radar Constant-Modulus Waveform Design with Prior Information of the Extended Target and Clutter
Authors: Yue Wenzhen , Zhang Yan , Liu Yimin , Xie Jingwen
Published: June 2016

Radar waveform design is of great importance for radar system performances and has drawn considerable attention recently. Constant modulus is an important waveform design consideration, both from the point of view of hardware realization and to allow for full utilization of the transmitter’s power. In this paper, we consider the problem of constant-modulus waveform design for extended target detection with prior information about the extended target and clutter. At first, we propose an arbitrary-phase unimodular waveform design method via joint transmitter-receiver optimization. We exploit a semi-definite relaxation technique to transform an intractable non-convex problem into a convex problem, which can then be efficiently solved. Furthermore, quadrature phase shift keying waveform is designed, which is easier to implement than arbitrary-phase waveforms. Numerical results demonstrate the effectiveness of the proposed methods.
Fault Diagnosis for Rotating Machinery Using Vibration Measurement Deep Statistical Feature Learning
Authors: Li Chuan , Sánchez René-Vinicio , Zurita Grover , Cerrada Mariela , Cabrera Diego
Published: June 2016

Fault diagnosis is important for the maintenance of rotating machinery. The detection of faults and fault patterns is a challenging part of machinery fault diagnosis. To tackle this problem, a model for deep statistical feature learning from vibration measurements of rotating machinery is presented in this paper. Vibration sensor signals collected from rotating mechanical systems are represented in the time, frequency, and time-frequency domains, each of which is then used to produce a statistical feature set. For learning statistical features, real-value Gaussian-Bernoulli restricted Boltzmann machines (GRBMs) are stacked to develop a Gaussian-Bernoulli deep Boltzmann machine (GDBM). The suggested approach is applied as a deep statistical feature learning tool for both gearbox and bearing systems. The fault classification performances in experiments using this approach are 95.17% for the gearbox, and 91.75% for the bearing system. The proposed approach is compared to such standard methods as a support vector machine, GRBM and a combination model. In experiments, the best fault classification rate was detected using the proposed model. The results show that deep learning with statistical feature extraction has an essential improvement potential for diagnosing rotating machinery faults.
Scan Line Based Road Marking Extraction from Mobile LiDAR Point Clouds
Authors: Yan Li , Liu Hua , Tan Junxiang , Li Zan , Xie Hong , Chen Changjun
Published: June 2016

Mobile Mapping Technology (MMT) is one of the most important 3D spatial data acquisition technologies. The state-of-the-art mobile mapping systems, equipped with laser scanners and named Mobile LiDAR Scanning (MLS) systems, have been widely used in a variety of areas, especially in road mapping and road inventory. With the commercialization of Advanced Driving Assistance Systems (ADASs) and self-driving technology, there will be a great demand for lane-level detailed 3D maps, and MLS is the most promising technology to generate such lane-level detailed 3D maps. Road markings and road edges are necessary information in creating such lane-level detailed 3D maps. This paper proposes a scan line based method to extract road markings from mobile LiDAR point clouds in three steps: (1) preprocessing; (2) road points extraction; (3) road markings extraction and refinement. In preprocessing step, the isolated LiDAR points in the air are removed from the LiDAR point clouds and the point clouds are organized into scan lines. In the road points extraction step, seed road points are first extracted by Height Difference (HD) between trajectory data and road surface, then full road points are extracted from the point clouds by moving least squares line fitting. In the road markings extraction and refinement step, the intensity values of road points in a scan line are first smoothed by a dynamic window median filter to suppress intensity noises, then road markings are extracted by Edge Detection and Edge Constraint (EDEC) method, and the Fake Road Marking Points (FRMPs) are eliminated from the detected road markings by segment and dimensionality feature-based refinement. The performance of the proposed method is evaluated by three data samples and the experiment results indicate that road points are well extracted from MLS data and road markings are well extracted from road points by the applied method. A quantitative study shows that the proposed method achieves an average completeness, correctness, and F-measure of 0.96, 0.93, and 0.94, respectively. The time complexity analysis shows that the scan line based road markings extraction method proposed in this paper provides a promising alternative for offline road markings extraction from MLS data.
Microwave Radiometers for Fire Detection in Trains: Theory and Feasibility Study
Authors: Alimenti Federico , Roselli Luca , Bonafoni Stefania
Published: June 2016

This paper introduces the theory of fire detection in moving vehicles by microwave radiometers. The system analysis is discussed and a feasibility study is illustrated on the basis of two implementation hypotheses. The basic idea is to have a fixed radiometer and to look inside the glass windows of the wagon when it passes in front of the instrument antenna. The proposed sensor uses a three-pixel multi-beam configuration that allows an image to be formed by the movement of the train itself. Each pixel is constituted by a direct amplification microwave receiver operating at 31.4 GHz. At this frequency, the antenna can be a 34 cm offset parabolic dish, whereas a 1 K brightness temperature resolution is achievable with an overall system noise figure of 6 dB, an observation bandwidth of 2 GHz and an integration time of 1 ms. The effect of the detector noise is also investigated and several implementation hypotheses are discussed. The presented study is important since it could be applied to the automatic fire alarm in trains and moving vehicles with dielectric wall/windows.
Fabrication of a Micro-Needle Array Electrode by Thermal Drawing for Bio-Signals Monitoring
Authors: Ren Lei , Jiang Qing , Chen Keyun , Chen Zhipeng , Pan Chengfeng , Jiang Lelun
Published: June 2016

A novel micro-needle array electrode (MAE) fabricated by thermal drawing and coated with Ti/Au film was proposed for bio-signals monitoring. A simple and effective setup was employed to form glassy-state poly (lactic-co-glycolic acid) (PLGA) into a micro-needle array (MA) by the thermal drawing method. The MA was composed of 6 × 6 micro-needles with an average height of about 500 μm. Electrode-skin interface impedance (EII) was recorded as the insertion force was applied on the MAE. The insertion process of the MAE was also simulated by the finite element method. Results showed that MAE could insert into skin with a relatively low compression force and maintain stable contact impedance between the MAE and skin. Bio-signals, including electromyography (EMG), electrocardiography (ECG), and electroencephalograph (EEG) were also collected. Test results showed that the MAE could record EMG, ECG, and EEG signals with good fidelity in shape and amplitude in comparison with the commercial Ag/AgCl electrodes, which proves that MAE is an alternative electrode for bio-signals monitoring.
Optimal Hybrid Renewable Airport Power System: Empirical Study on Incheon International Airport, South Korea
Authors: Baek Seoin , Kim Heetae , Chang Hyun
Published: June 2016

In response to global energy problems (e.g., the oil crisis, the Fukushima accident, the Paris Agreement), the South Korean government has executed a strict renewable energy plan to decrease the country’s dependence on fossil fuel. Public facilities, such as international airports, which use substantial amounts of electricity, are the most in need of government regulation. In this study, we attempt to determine the optimal hybrid electricity generation system for South Korea’s largest airport: Incheon International Airport. In the analysis, we use three scenarios: the current load, 120% of the current load, and 140% of the current load, according to the plan to expand Incheon International Airport. According to the COE (cost of electricity) and the NPC (net present cost) of the result, it is economically feasible to completely cover the potential increase in the electric load with PV power. Government policy implications and limitations are discussed.
Sustainable Supply Chain Management: The Influence of Disposal Scenarios on the Environmental Impact of a 2400 L Waste Container
Authors: Galve José , Elduque Daniel , Pina Carmelo , Javierre Carlos
Published: June 2016

This paper analyzes the influence of the supply chain management on the environmental impact of a 2400 L waste disposal container used in most cities of Spain. The studied functional unit, a waste disposal container, made up mostly of plastic materials and a metallic structure, and manufactured in Madrid (Spain), is distributed to several cities at an average distance of 392 km. A life cycle assessment of four different scenarios (SC) has been calculated with the software EcoTool v4.0 (version 4.0; i+: Zaragoza, Spain, 2015) and using Ecoinvent v3.0 database (version 3.0; Swiss Centre for Life Cycle Inventories: St. Gallen, Switzerland, 2013). The environmental impact has been characterized with two different methodologies, recipe and carbon footprint. In order to reduce the environmental impact, several end of life scenarios have been performed, analyzing the influence of the supply chain on a closed-looped system that increases recycling. Closed loop management of the waste and reuse of parts allows companies to stop selling products and start selling the service that their products give to the consumers.
The Livelihood Vulnerability of Rural Households in Earthquake-Stricken Areas—A Case Study of Ning’er, Yunnan Province
Authors: Wei Benyong , Su Guiwu , Qi Wenhua , Sun Lei
Published: June 2016

Earthquakes happen suddenly and are immensely destructive. They not only destroy entire societal production and infrastructure systems but also seriously interfere with daily life and reduce opportunities to earn income in earthquake-affected areas. In this paper, using the Ning’er Ms 6.4 earthquake in 2007 as an example, we analyzed the livelihood vulnerability of rural households in Ning’er County, Yunnan, based on data from questionnaires and on-site interviews. The results showed that on the whole, local rural household livelihoods are relatively vulnerable in the earthquake-affected area of Ning’er. The main reason for the high level of vulnerability of rural households is the lack of single or multiple incomes. Due to the shortage of household income, the capacity of rural households to manage the aftermath of an earthquake is low. Improving the income allocation and transformation level and expanding methods of earning income is an effective way for rural households to decrease livelihood vulnerability in earthquake-prone areas. Some suggestions are given for local rural households to enhance their livelihood income levels in the event of earthquakes.
Assimilation and Translocation of Dry Matter and Phosphorus in Rice Genotypes Affected by Salt-Alkaline Stress
Authors: Tian Zhijie , Li Jingpeng , Jia Xueying , Yang Fu , Wang Zhichun
Published: June 2016

Salt-alkaline stress generally leads to soil compaction and fertility decline. It also restricts rice growth and phosphorus acquisition. In this pot experiment, two relatively salt-alkaline tolerant (Dongdao-4 and Changbai-9) and sensitive (Changbai-25 and Tongyu-315) rice genotypes were planted in sandy (control) and salt-alkaline soil to evaluate the characteristics of dry matter and phosphorus assimilation and translocation in rice. The results showed that dry matter and phosphorus assimilation in rice greatly decreased under salt-alkaline stress as the plants grew. The translocation and contribution of dry matter and phosphorus to the grains also increased markedly; different performances were observed between genotypes under salt-alkaline stress. D4 and C9 showed higher dry matter translocation, translocation efficiency and contribution of dry matter assimilation to panicles than those of C25 and T315. These changes in D4 and C9 indexes occurred at low levels of salt-alkaline treatment. Higher phosphorus acquisition efficiency of D4 and C9 were also found under salt-alkaline conditions. Additionally, the phosphorus translocation significantly decreased in C25 and T315 in the stress treatment. In conclusion, the results indicated that salt-alkaline-tolerant rice genotypes may have stronger abilities to assimilate and transfer biomass and phosphorus than sensitive genotypes, especially in salt-alkaline conditions.
Vertical Coordination in Organic Food Chains: A Survey Based Analysis in France, Italy and Spain
Authors: Cavaliere Alessia , Peri Massimo , Banterle Alessandro
Published: June 2016

The paper analyses characteristics of vertical relationships of organic supply chains with a specific focus on the processing and retailing sectors. The analysis takes into account different regions of the EU Mediterranean area. Data were collected through interviews using an ad hoc questionnaire. The survey was based on a sample of 306 firms, including processors and retailers. The analysis revealed that a relevant aspect for the processing firms of organic products concerns the guaranteeing of safety and quality levels for the products. The main tools to implement the quality management are based on the adoption of specific production regulations and quality controls. The premium price most frequently applied by processors ranges from 10% to 40% and similar values are revealed for retailers. The diffusion of supply contracts allows the vertical coordination between agriculture and processing firms in the organic supply chains. The main distribution channels for the processing firms are represented by specialised shops in organic products, direct sales and supermarkets.