bluuebunny/crossref_metadata_2025 huggingface dataset:
Phenotypic Variation and Relationships between Grain Yield, Protein Content and Unmanned Aerial Vehicle-Derived Normalized Difference Vegetation Index in Spring Wheat in Nordic–Baltic Environments
Authors: Jansone Zaiga , Rendenieks Zigmārs , Lapāns Andris , Tamm Ilmar , Ingver Anne , Gorash Andrii , Aleliūnas Andrius , Brazauskas Gintaras , Shafiee Sahameh , Mróz Tomasz , Lillemo Morten , Kollist Hannes , Bleidere Māra
Published: December 2023

Accurate and robust methods are needed to monitor crop growth and predict grain yield and quality in breeding programs, particularly under variable agrometeorological conditions. Field experiments were conducted during two successive cropping seasons (2021, 2022) at four trial locations (Estonia, Latvia, Lithuania, Norway). The focus was on assessment of the grain yield (GY), grain protein content (GPC), and UAV-derived NDVI measured at different plant growth stages. The performance and stability of 16 selected spring wheat genotypes were assessed under two N application rates (75, 150 kg N ha−1) and across different agrometeorological conditions. Quantitative relationships between agronomic traits and UAV-derived variables were determined. None of the traits exhibited a significant (p < 0.05) genotype-by-nitrogen interaction. High-yielding and high-protein genotypes were detected with a high WAASB stability, specifically under high and low N rates. This study highlights the significant effect of an NDVI analysis at GS55 and GS75 as key linear predictors, especially concerning spring wheat GYs. However, the effectiveness of these indices depends on the specific growing conditions in different, geospatially distant locations, limiting their universal utility.
Genome-Wide Identification, Characterization, and Expression Analysis of the Amino Acid Permease Gene Family in Soybean
Authors: Zhang Yuan , Wang Le , Song Bao-Hua , Zhang Dan , Zhang Hengyou
Published: December 2023

Amino acid permeases (AAPs) play important roles in transporting amino acids in plant species, leading to increased low-nitrogen tolerance, grain yield, or protein content. However, very few AAPs have been characterized in soybean (Glycine max). In this study, we scanned the soybean reference genome and identified a total of 36 AAP genes (named GmAAP). The GmAAPs were phylogenetically divided into three evolutionary clades, with the genes in the same clades sharing similar gene structures and domain organization. We also showed that seventeen GmAAP genes on ten chromosomes were in collinearity, likely due to whole-genome duplication. Further analysis revealed a variety of cis-acting regulatory elements (such as hormone response elements (ABRE, ERE, GARE, P-box, and TGA-element), stress response elements (LTR, MBS, MYB-related components, TC-rich repeats, TCA-element, and WUN-motif), the tissue expression element (GCN4-motif), and the circadian regulatory element (circadian) present in the 2 kb region of the GmAAP promoter region, demonstrating functional diversity and expression specificity. RNA-Seq data and quantitative real-time PCR identified five GmAAPs showing differential expression under nitrogen limitation, including GmAAP3, GmAAP5, and GmAAP8 showing downregulation while GmAAP14, GmAAP29 showed upregulation, suggesting their involvement in low-nitrogen stress response. These results provide comprehensive information on soybean AAP genes in nitrogen stress, and provide putative candidates with possible roles in enhancing amino acid delivery to seeds for yield improvement.
Effects of Supplemental Red and Far-Red Light at Different Growth Stages on the Growth and Nutritional Properties of Lettuce
Authors: Ju Jun , Zhang Shuchang , Hu Youzhi , Zhang Minggui , He Rui , Li Yamin , Liu Xiaojuan , Liu Houcheng
Published: December 2023

The understanding of the supplementation scheme of red (R) and far-red (FR) light in the cultivation of leafy vegetables in plant factories with artificial lighting (PFALs) is still limited. This study investigated the effects of supplemental R and FR light at different plant growth stages on the morphology, growth characteristics, and nutritional properties of lettuce. Supplemented R + FR throughout the entire growth stages was beneficial for the growth of lettuce, for which the total fresh weight was increased by 53.76%, and it also enhanced the content of soluble sugars by 39.98% and vitamin E by 34.21%. The pre-supplementation of FR light followed by supplementation of R light at various growth stages not only increase the total fresh weight of lettuce by 26.10% but also ensured that most nutritional indices did not decrease, and it even increased the content of soluble sugars by 35.24% while decreasing the nitrate content by 31.52%. The scheme of pre-supplementation of R light followed by the supplementation of FR light promoted a more upright plant architecture in lettuce, which was advantageous for improving the cultivation density of lettuce in plant factories with artificial lighting, thereby enhancing the yield/m2. Moreover, it could increase the vitamin E content of lettuce. The growth and nutritional properties of lettuce exhibit significant effects under different supplementation methods of R and FR light. In PFALs, the selection of different light supplement schemes also requires a careful balance between yield and quality. From an energy-saving perspective, the pre-supplementation of FR light followed by supplementation of R light at various plant growth stages is beneficial for lettuce production in PFALs.
Effects of Astaxanthin on Growth Performance, Gut Structure, and Intestinal Microorganisms of Penaeus vannamei under Microcystin-LR Stress
Authors: Song Guolin , Zhao Yingcan , Lu Junhao , Liu Zhe , Quan Jinqiang , Zhu Lirui
Published: December 2023

Microcystin-LR (MC-LR) are biologically active cycloheptapeptide compounds that are released by cyanobacteria during water blooms and are extensively found in aquatic ecosystems. The Penaeus vannamei is a significant species in global aquaculture. However, the high level of eutrophication in aquaculture water frequently leads to outbreaks of cyanobacterial blooms, posing a significant threat to its sustainable cultivation. Astaxanthin (AX) is commonly utilized in aquaculture for its physiological benefits, including promoting growth and enhancing immune function in cultured organisms. This study aimed to examine the protective effect of astaxanthin on P. vannamei exposed to microcystin-induced stress. The experiment consisted of three groups: one group was fed formulated feed containing MC (100 μg/kg), another group was fed formulated feed containing MC (100 μg/kg) + AX (100 mg/kg), and the third group was fed basic feed (control group). After 15 days of feeding, the specific growth rate (SGR) was significantly higher in the MCAX group (2.21% day−1) compared to the MC group (0.77% day−1), and there was no significant difference between the MCAX group (2.21% day−1) and the control group (2.24% day−1). Similarly, the percent of weight gain (PWG) was also significantly higher in the MCAX group (14.61%) compared to the MC group (13.44%) and the control group (16.64%). Compared to the control group, the epithelial cells in the MC group suffered severe damage and detachment from the basement membrane. However, in the MCAX group, although there was still a gap between the intestinal epithelial cells and the basement membrane, the overall intestinal morphology was slightly less impaired than it was in the MC group. The analysis of the intestinal microbiota revealed a significant disparity in the community composition (chao 1 and ACE) between the MC and MCAX groups. When comparing the various bacterial genera, the MC group exhibited an increase in Vibrio abundance, whereas the MCAX group showed a decrease in both Shewanella and Vibrio abundance. The results indicate that AX has a positive impact on the growth performance and resistance of P. vannamei against MC by regulating the composition of the intestinal microbiota. AX can be utilized to mitigate the detrimental effects of MC in aquaculture practices. This function could be attributed to the role of AX in preserving the structural integrity of the intestinal mucosa and regulating the composition of the intestinal microbiota.
Transboundary Cooperation in the Tumen River Basin Is the Key to Amur Leopard (Panthera pardus) Population Recovery in the Korean Peninsula
Authors: Li Hailong , Pandey Puneet , Li Ying , Wang Tianming , Singh Randeep , Peng Yuxi , Lee Hang , Lee Woo-Shin , Zhu Weihong , Choi Chang-Yong
Published: December 2023

The interconnected forest regions along the lower Tumen River, at the Sino-North Korean border, provide critical habitats and corridors for the critically endangered Amur Leopard (Panthera pardus orientalis). In this region, there are two promising corridors for leopard movement between China and North Korea: the Jingxin–Dapanling (JD) and Mijiang (MJ) corridors. Past studies have confirmed the functionality of the JD corridor, but leopards’ utilization of the MJ corridor has not yet been established or confirmed. In this study, we assessed the functionality of the MJ corridor. The study area was monitored using camera traps between May 2019 and July 2021. We also analyzed 33 environmental and vegetation factors affecting leopard survival and analyzed leopard movement. In the Mijiang area, the Amur leopard was mainly active in the region adjacent to the Northeast China Tiger and Leopard National Park and did not venture into area near the North Korean border. The complex forest structure allowed leopards to move into the Mijiang area. However, the high intensity of human disturbance and manufactured physical barriers restricted further southward movement. Therefore, human-induced disturbances such as grazing, mining, farming, logging, and infrastructure development must be halted and reversed to make the Mijiang region a functional corridor for the Amur leopard to reach the North Korean forest. This necessitates inter-governmental and international cooperation and is essential for the long-term survival of the Amur leopard.
Decline in Size-at-Maturity of European Hake in Relation to Environmental Regimes: A Case in the Eastern Ionian Sea
Authors: Legaki Aglaia , Chatzispyrou Archontia , Damalas Dimitrios , Sgardeli Vasiliki , Lefkaditou Evgenia , Anastasopoulou Aikaterini , Dogrammatzi Aikaterini , Charalampous Konstantinos , Stamouli Caterina , Vassilopoulou Vassiliki , Tserpes George , Mytilineou Chryssi
Published: December 2023

European hake, Merluccius merluccius L. 1758, is a highly valuable demersal fish species exploited in both the east Atlantic and the Mediterranean Sea. Changes in the size-at-maturity of this species have been reported in various geographic areas. Size-at-maturity is a key parameter in fishery management. Our main goal was to study the trend of the size-at-maturity of European hake in the eastern Ionian Sea (Central Mediterranean) over the last five decades. Utilizing a multi-decadal series of data for various environmental variables, we employed multivariate analyses and non-additive modeling in an attempt to identify shifts in the climatic environment of the eastern Ionian Sea and whether the maturation of the hake population could be affected by these changes. The analyses used suggest a plausible environmental regime shift in the study area in the late 1990s/early 2000s. The decrease in size-at-maturity that was detected in the last two decades may, thus, be associated with environmental changes. However, as many fish stocks already experience fishery-induced evolution, further investigation is necessary to determine whether this environmental effect is an additional stressor on a possibly already fishery-impacted population. The outcomes of this study highlight the importance of investigating the relationship between fish reproductive traits and altered environmental conditions, as the latter are generally ignored during assessments, affecting the robustness of fishery management.
A Novel UHPLC–MS/MS Method for the Measurement of 25-Hydroxyvitamin D3 in Canine Serum and Its Application to Healthy Dogs
Authors: Bardhi Anisa , Vecchiato Carla Giuditta , Sabetti Maria Chiara , Tardo Antonio Maria , Vasylyeva Kateryna , Biagi Giacomo , Pietra Marco , Barbarossa Andrea
Published: December 2023

Several studies have shown the importance of vitamin D3 supplementation in small animals. In dogs, a low vitamin D3 status is associated not only with bone metabolism but also with different kinds of disorders, such as congestive heart failure, gastrointestinal diseases, chronic kidney diseases, and some types of cancer. However, it is crucial to maintain balance and monitor the introduction of this essential nutrient through the diet because over-supplementation can result in toxicity. Due to the clinical importance of assessing the vitamin D3 status in small animal patients, a quick, simple, and highly performing analytical method for its measurement is needed. In this study, we describe the development of a novel liquid chromatography–tandem mass spectrometry method for 25-hydroxyvitamin D3 quantification in canine serum. The approach was successfully validated following current European guidelines, proving excellent linearity (R2 always ≥0.996), accuracy (always within ±13%) and precision (always <10%). The application of the validated approach to samples collected from 40 healthy dogs made possible the definition of a reliable reference interval for 25-hydroxyvitamin D3, the main biomarker of vitamin D3. In addition, variations below 5% in the results obtained quantifying the same samples using a water-based calibration curve demonstrated that a surrogate matrix may be used without affecting data accuracy. Thanks to its simplicity, the proposed technique represents a useful tool for supporting clinical routine and investigating correlations between serum concentrations of this metabolite and multiple diseases. Additionally, it could enable the monitoring of supplementation in small animal patients in veterinary clinical practice.
Chronic Inflammatory Enteropathy and Low-Grade Intestinal T-Cell Lymphoma Are Associated with Altered Microbial Tryptophan Catabolism in Cats
Authors: Barko Patrick C. , Williams David A. , Wu Yu-An , Steiner Joerg M. , Suchodolski Jan S. , Gal Arnon , Marsilio Sina
Published: December 2023

Chronic inflammatory enteropathy (CIE) and low-grade intestinal T-cell lymphoma (LGITL) are common chronic enteropathies (CE) in cats. Enteric microbiota dysbiosis is implicated in the pathogenesis of CE; however, the mechanisms of host–microbiome interactions are poorly understood in cats. Microbial indole catabolites of tryptophan (MICT) are gut bacterial catabolites of tryptophan that are hypothesized to regulate intestinal inflammation and mucosal barrier function. MICTs are decreased in the sera of humans with inflammatory bowel disease and previous studies identified altered tryptophan metabolism in cats with CE. We sought to determine whether MICTs were decreased in cats with CE using archived serum samples from cats with CIE (n = 44) or LGITL (n = 31) and healthy controls (n = 26). Quantitative LC-MS/MS was used to measure serum concentrations of tryptophan, its endogenous catabolites (kynurenine, kynurenate, serotonin) and MICTs (indolepyruvate, indolealdehyde, indoleacrylate, indoleacetamide, indoleacetate, indolelactate, indolepropionate, tryptamine). Serum concentrations of tryptophan, indolepropionate, indoleacrylate, indolealdehyde, indolepyruvate, indolelactate were significantly decreased in the CIE and LGITL groups compared to those in healthy controls. Indolelactate concentrations were significantly lower in cats with LGITL compared to CIE (p = 0.006). Significant correlations were detected among serum MICTs and cobalamin, folate, fPLI, and fTLI. Our findings suggest that MICTs are promising biomarkers to investigate the role of gut bacteria in the pathobiology of chronic enteropathies in cats.
Supplement Type Impact on the Performance and Nutrient Dynamics of Nursing Does and Kids Raised in Woodlands
Authors: Shrestha Bhuwan , Karki Uma , Chaudhary Santoshi , Tiwari Anand , Karki Lila B.
Published: December 2023

The influence of different supplement types on the performance and nutrient dynamics of goats stocked in woodlands is not known. The objective of this study was to evaluate the effect of supplement type on the performance and the concentration of fecal nutrients of nursing does and the performance of kids raised in woodlands. One group of goats (SG, 9 does; 18 kids) was allowed supplemental grazing in adjacent silvopasture plots for 3–4 h daily and another group (SF, 8 does; 15 kids) was supplemented with corn (0.5% of metabolic weight) and ad libitum hay. Vegetation samples were collected and analyzed for productivity and quality (crude protein, CP; acid detergent fiber, ADF; neutral detergent fiber, NDF). The quality of the hay (N, ADF, NDF) and fecal samples (N, P, Ca) was analyzed. The animals’ live weight, FAMACHA score, and body condition score were collected. The browsing height for does consuming woodland vegetation was measured. Data were analyzed using the GLM procedure, Mixed procedure, and MEANS procedure in SAS 9.4. SG does showed better FAMACHA scores vs. SF does (p < 0.05). Fecal N and ADF were greater (p < 0.0001) in SG does vs. SF does. The findings showed a better performance and greater concentration of fecal nutrients in SG does vs. SF does, suggesting grazing quality pastures is a better option than using feedstuffs to supplement nursing does in woodland.
Phytochemical Composition and Pharmacological Efficacy Evaluation of Calamintha nepeta, Calamintha sylvatica, Lavandula austroapennina and Mentha piperita Essential Oils for the Control of Honeybee (Apis mellifera) Varroosis
Authors: Bava Roberto , Castagna Fabio , Lupia Carmine , Ruga Stefano , Conforti Filomena , Marrelli Mariangela , Argentieri Maria Pia , Musella Vincenzo , Britti Domenico , Statti Giancarlo , Palma Ernesto
Published: December 2023

Varroa destructor is currently considered the parasite that causes the greatest damage and economic losses to honeybee farms. Its presence is often associated with that of viral and bacterial pathogens, which ultimately leads to colony collapse. Careful control of the parasitic load is therefore necessary to avoid the onset of these events. Although chemical treatments are often in easily and quickly administered formulations, in recent years, there have been increasingly frequent reports of the onset of drug resistance phenomena, which must lead to reconsidering their use. Furthermore, chemical compounds can easily accumulate in the food matrices of the hive, with possible risks for the final consumer. In such a condition, it is imperative to find alternative treatment solutions. Essential oils (EOs) prove to be promising candidates due to their good efficacy and good environmental biodegradability. In this study, the acaricidal efficacy of the EOs of Calamintha sylvatica Bromf., Calamintha nepeta Savi, Lavandula austroapennina N.G. Passal. Tundis & Upson and Mentha piperita L., extracted from botanical species belonging to the Lamiaceae family, was evaluated. The test chosen for the evaluation was residual toxicity by contact. The examined EOs were diluted in Acetone to a concentration of 2, 1 and 0.5 mg/mL. At the highest concentration, the EOs demonstrated an acaricidal activity equal to 52% for C. nepeta, 60% for C. sylvatica, 80% for L. austroapennina and 68% for M. piperita. Of the EOs tested, therefore, Lavender proves to be a good candidate for subsequent evaluations in semi-field and field studies.
Retrospective Multi-Locus Sequence Analysis of African Swine Fever Viruses by “PACT” Confirms Co-Circulation of Multiple Outbreak Strains in Uganda
Authors: Kabuuka Tonny , Mulindwa Henry , Bastos Armanda D. S. , van Heerden Juanita , Heath Livio , Fasina Folorunso O.
Published: December 2023

African swine fever (ASF) is a haemorrhagic fever of swine that severely constrains pig production, globally. In Uganda, at least 388 outbreaks of ASF were documented from 2001 to 2012. We undertook a retrospective serological and molecular survey of ASF virus (ASFV) using banked samples collected from seven districts (Pallisa, Lira, Abim, Nebbi, Kabarole, Kibaale, and Mukono) of Uganda. Six assays (ELISA for antibody detection, diagnostic p72 gene PCR and genomic amplification, and sequencing of four gene regions (p72 [P], p54 [A], CVR of the 9RL-ORF [C], and TK [T]), hereinafter referred to as P-A-C-T (PACT)) were evaluated. Antibodies to ASFV were detected in the Abim district (6/25; 24.0%), and the remainder of the serum samples were negative (187/193; 96.9%). For the tissue samples, ASFV detection by assay was 8.47% for P, 6.78% for A, 8.47% for C, and 16.95% for T. The diagnostic PCR (p72 gene) detected seven positive animals from four districts, whereas the TK assay detected ten positives from all seven districts. In addition to the superior detection capability of TK, two virus variants were discernible, whereas CVR recovered three variants, and p72 and p54 sequencing each identified a single variant belonging to genotype IX. Our results indicate that dependence on serology alone underestimates ASF positivity in any infected region, that multi-locus sequence analysis provides better estimates of outbreak strain diversity, and that the TK assay is superior to the WOAH-prescribed conventional p72 diagnostic PCR, and warrants further investigation.
Comprehensive Transcriptomic and Metabolomic Analysis Revealed the Functional Differences in Pigeon Lactation between Male and Female during the Reproductive Cycle
Authors: Fu Yuting , Song Yan , Jiang Danli , Pan Jianqiu , Li Wanyan , Zhang Xumeng , Chen Wenbin , Tian Yunbo , Shen Xu , Huang Yunmao
Published: December 2023

Lactation is a unique reproductive behavior in pigeons, with the crop serving as the organ responsible for secreting pigeon milk. Both male and female pigeons can produce crop milk and rear their offspring through a division of labor. Since the time of the secretion of pigeon crop milk is different in the process of feeding the young, whether the metabolism and formation of pigeon milk use the same mechanism is a very interesting scientific question. However, the metabolic dynamics and underlying genetic mechanisms involved in the formation of pigeon crop milk remain unclear, particularly during the incubation–feeding reproductive cycle. In this study, we integrated lactation-associated metabolism and transcriptome data from the crop tissues of both male and female pigeons during the brooding and feeding stages. We mapped the changes in metabolites related to milk formation in the crop tissues during these stages. Through metabolome profiling, we identified 1413 metabolites among 18 crop tissues. During the breeding cycles, the concentrations of estrone, L-ergothioneine, and L-histidine exhibited the most dynamic changes in females. In contrast, estrone, L-anserine, 1-methylhistidine, homovanillate, oxidized glutathione, and reducing glutathione showed the most dynamic changes in males. Gender-specific differences were observed in the metabolome, with several metabolites significantly differing between males and females, many of which were correlated with cytokine binding, immunity, and cytochrome P450 activity. Using this dataset, we constructed complex regulatory networks, enabling us to identify important metabolites and key genes involved in regulating the formation of pigeon milk in male and female pigeons, respectively. Additionally, we investigated gender-associated differences in the crop metabolites of pigeons. Our study revealed differences in the modulation of pigeon crop milk metabolism between males and females and shed light on the potential functions of male and female pigeon milk in the growth, development, and immunity of young pigeons, an area that has not been previously explored. In conclusion, our results provide new insights into the metabolic regulation of pigeon crop milk formation during the brooding and breeding stages. Furthermore, our findings lay the foundation for the accurate development of artificial pigeon milk.
Usefulness of Ultrasound Shear Wave Elastography for Detection of Quadriceps Contracture in Immobilized Rats
Authors: Suwankanit Kanokwan , Shimizu Miki , Suzuki Kazuhiko , Kaneda Masahiro
Published: December 2023

Quadriceps contracture is an abnormal pathological shortening of the muscle–tendon unit. To improve the prognosis of quadriceps contracture, improvement of its diagnostic method is needed. In this study, we evaluated the diagnostic utility of ultrasound shear wave elastography in a rat model of quadriceps contracture induced by immobilization. Fifty Wistar rats were randomly divided into control and immobilization groups. During up to 4 weeks of joint immobilization, the quadriceps elastic modulus, muscle hardness, creatinine phosphokinase levels, joint range of motion, histopathologic parameters, and levels of fibrosis-associated mRNA expression were measured every week in the immobilization and control groups and compared. In the immobilization group, the elastic modulus gradually but significantly increased (p < 0.05) throughout the immobilization period. However, muscle hardness and serum creatinine phosphokinase levels only increased at 1 and 2 weeks after the start of immobilization, respectively. Muscle atrophy and shortening progressed throughout the immobilization group. Collagen type I and III, α-SMA protein, and mRNA expression of IL-1β and TGF-β1 significantly increased (p < 0.05) throughout in the immobilization group. Ultrasound shear wave elastography is the most useful method for clinical assessment of muscle contracture.
Profiling Antibiotic Susceptibility among Distinct Enterococcus faecalis Isolates from Dental Root Canals
Authors: Manoil Daniel , Cerit Ender Efe , Fang Hong , Durual Stéphane , Brundin Malin , Belibasakis Georgios N.
Published: December 2023

Enterococcus faecalis, a leading multi-resistant nosocomial pathogen, is also the most frequently retrieved species from persistently infected dental root canals, suggesting that the oral cavity is a possible reservoir for resistant strains. However, antimicrobial susceptibility testing (AST) for oral enterococci remains scarce. Here, we examined the AST profiles of 37 E. faecalis strains, including thirty-four endodontic isolates, two vanA-type vancomycin-resistant isolates, and the reference strain ATCC-29212. Using Etest gradient strips and established EUCAST standards, we determined minimum inhibitory concentrations (MICs) for amoxicillin, vancomycin, clindamycin, tigecycline, linezolid, and daptomycin. Results revealed that most endodontic isolates were susceptible to amoxicillin and vancomycin, with varying levels of intrinsic resistance to clindamycin. Isolates exceeding the clindamycin MIC of the ATCC-29212 strain were further tested against last-resort antibiotics, with 7/27 exhibiting MICs matching the susceptibility breakpoint for tigecycline, and 1/27 reaching that of linezolid. Both vanA isolates confirmed vancomycin resistance and demonstrated resistance to tigecycline. In conclusion, while most endodontic isolates remained susceptible to first-line antibiotics, several displayed marked intrinsic clindamycin resistance, and MICs matched tigecycline’s breakpoint. The discovery of tigecycline resistance in vanA isolates highlights the propensity of clinical clone clusters to acquire multidrug resistance. Our results emphasize the importance of implementing AST strategies in dental practices for continued resistance surveillance.
Anti-Salmonella Activity of a Novel Peptide, KGGDLGLFEPTL, Derived from Egg Yolk Hydrolysate
Authors: Pimchan Thippawan , Tian Fu , Thumanu Kanjana , Rodtong Sureelak , Yongsawatdigul Jirawat
Published: December 2023

The present study aimed to characterize the mode of action of a novel antimicrobial peptide isolated from egg yolk hydrolysate. The EYHp6, KGGDLGLFEPTL, exhibited inhibition against Salmonella enterica serovar Typhimurium TISTR 292 and S. enterica serovar Enteritidis DMST 15679 with a MIC value of 2 mM. In contrast, S. enterica serovar Newport ATCC 6962 and other strains of Typhimurium and Enteritidis were inhibited at 4 mM. EYHp6 increased the cell membrane permeability of S. Typhimurium TISTR 292, leading to DNA leakage. Membrane integrity determined by propidium iodide and SYTO9 staining visualized by confocal microscopy demonstrated that EYHp6 at 1 × MIC induced disruption of cell membranes. Electron microscopy revealed that treatment of S. Typhimurium with EYHp6 led to damage to the cell membrane, causing the leakage of intracellular contents. Synchrotron-based Fourier-transform infrared spectroscopy indicated that EYHp6 killed S. Typhimurium by targeting fatty acids and nucleic acids in the cell membrane. The peptide did not show hemolytic activity up to 4 mM. These findings suggest that EYHp6 could be a promising antibacterial agent for controlling the growth of S. enterica.
Design, Synthesis, Antimicrobial Properties, and Molecular Docking of Novel Furan-Derived Chalcones and Their 3,5-Diaryl-∆2-pyrazoline Derivatives
Authors: Mahdi Inas S. , Abdula Ahmed Mutanabbi , Jassim Abdulkadir M. Noori , Baqi Younis
Published: December 2023

The present work focuses on the synthesis and preliminary structure activity relationships (SARs) of furan-derived chalcones and their corresponding ∆2-pyrazoline derivatives as antimicrobial agents. Eight novel chalcone derivatives and eight ∆2-pyrazoline compounds were synthesized in moderate to good isolated yields. The target compounds were evaluated as antimicrobial agents against two Gram-positive (Staphylococcus aureus and Staphylococcus epidermidis), two Gram-negative (Escherichia coli and Klebsiella pneumoniae), and fungi (Candida albicans) species. Based on the SARs, chalcones 2a and 2h showed inhibition activity on all tested microbial species, while ∆2-pyrazoline 3d was found to be selective for some microbial species. The most potent compounds (2a, 2h, and 3d) were docked into glucosamine-6-phosphate synthase (GlcN-6-P), the molecular target enzyme for antimicrobial agents, utilizing the Autodock 4.2 program, in order to study their virtual affinity and binding mode with the target enzyme. The selected potent compounds were found to bind to the active site of the enzyme probably in a similar way to that of the substrate as suggested by the docking study. In summary, the newly developed furan-derived chalcones and their ∆2-pyrazoline derivatives could serve as potent leads toward the development of novel antimicrobial agents.
Melatonin as a Mediator of the Gut Microbiota–Host Interaction: Implications for Health and Disease
Authors: Bonmatí-Carrión María-Ángeles , Rol Maria-Angeles
Published: December 2023

In recent years, the role played by melatonin on the gut microbiota has gained increasingly greater attention. Additionally, the gut microbiota has been proposed as an alternative source of melatonin, suggesting that this antioxidant indoleamine could act as a sort of messenger between the gut microbiota and the host. This review analyses the available scientific literature about possible mechanisms involved in this mediating role, highlighting its antioxidant effects and influence on this interaction. In addition, we also review the available knowledge on the effects of melatonin on gut microbiota composition, as well as its ability to alleviate dysbiosis related to sleep deprivation or chronodisruptive conditions. The melatonin–gut microbiota relationship has also been discussed in terms of its role in the development of different disorders, from inflammatory or metabolic disorders to psychiatric and neurological conditions, also considering oxidative stress and the reactive oxygen species-scavenging properties of melatonin as the main factors mediating this relationship.
Verbascoside-Rich Plant Extracts in Animal Nutrition
Authors: Rossi Raffaella , Mainardi Edda , Vizzarri Francesco , Corino Carlo
Published: December 2023

In recent years, the search for dietary intervention with natural products able to sustain animal health and decrease environmental impact, has raised the number of studies pertaining to the use of plants’ secondary metabolites. In fact, in livestock, there is a clear relationship between the animals’ antioxidant status and the onset of some diseases that negatively affect animal welfare, health, and productive performance. An interesting compound that belongs to the secondary metabolites family of plants, named phenylpropanoids, is verbascoside. The genus Verbascum, which includes more than 233 plant species, is the genus in which this compound was first identified, but it has also been found in other plant extracts. Verbascoside exhibits several properties such as antioxidant, anti-inflammatory, chemopreventive, and neuroprotective properties, that have been evaluated mainly in in vitro studies for human health. The present work reviews the literature on the dietary integration of plant extracts containing verbascoside in livestock. The effects of dietary plant extracts containing verbascoside on the productive performance, antioxidant status, blood parameters, and meat quality in several animal species were evaluated. The present data point out that dietary plant extracts containing verbascoside appear to be a favorable dietary intervention to enhance health, antioxidant status, and product quality in livestock.
Impact of Chromium Picolinate on Leydig Cell Steroidogenesis and Antioxidant Balance Using an In Vitro Insulin Resistance Model
Authors: Moreira Rúben , Martins Ana D. , Ferreira Rita , Alves Marco G. , Pereira Maria de Lourdes , Oliveira Pedro F.
Published: December 2023

Leydig cells (LCs) play a pivotal role in male fertility, producing testosterone. Chromium (III) picolinate (CrPic3), a contentious supplement with antidiabetic and antioxidant properties, raises concerns regarding male fertility. Using a rodent LC line, we investigated the cytotoxicity of increasing CrPic3 doses. An insulin resistance (IR) model was established using palmitate (PA), and LCs were further exposed to CrPic3 to assess its antioxidant/antidiabetic activities. An exometabolome analysis was performed using 1H-NMR. Mitochondrial function and oxidative stress were evaluated via immunoblot. Steroidogenesis was assessed by quantifying androstenedione through ELISA. Our results uncover the toxic effects of CrPic3 on LCs even at low doses under IR conditions. Furthermore, even under these IR conditions, CrPic3 fails to enhance glucose consumption but restores the expression of mitochondrial complexes CII and CIII, alleviating oxidative stress in LCs. While baseline androgen production remained unaffected, CrPic3 promoted androstenedione production in LCs in the presence of PA, suggesting that it promotes cholesterol conversion into androgenic intermediates in this context. This study highlights the need for caution with CrPic3 even at lower doses. It provides valuable insights into the intricate factors influencing LCs metabolism and antioxidant defenses, shedding light on potential benefits and risks of CrPic3, particularly in IR conditions.
Repurposing Glutathione Transferases: Directed Evolution Combined with Chemical Modification for the Creation of a Semisynthetic Enzyme with High Hydroperoxidase Activity
Authors: Axarli Irene , Ataya Farid , Labrou Nikolaos E.
Published: December 2023

Glutathione peroxidases (GPXs) are antioxidant selenoenzymes, which catalyze the reduction of hydroperoxides via glutathione (GSH), providing protection to cells against oxidative stress metabolites. The present study aims to create an efficient semisynthetic GPX based on the scaffold of tau class glutathione transferase (GSTU). A library of GSTs was constructed via DNA shuffling, using three homologue GSTUs from Glycine max as parent sequences. The DNA library of the shuffled genes was expressed in E. coli and the catalytic activity of the shuffled enzymes was screened using cumene hydroperoxide (CuOOH) as substrate. A chimeric enzyme variant (named Sh14) with 4-fold enhanced GPX activity, compared to the wild-type enzyme, was identified and selected for further study. Selenocysteine (Sec) was substituted for the active-site Ser13 residue of the Sh14 variant via chemical modification. The GPX activity (kcat) and the specificity constant (kcat/Κm) of the evolved seleno-Sh14 enzyme (SeSh14) was increased 177- and 2746-fold, respectively, compared to that of the wild-type enzyme for CuOOH. Furthermore, SeSh14 effectively catalyzed the reduction of hydrogen peroxide, an activity that is completely undetectable in all GSTs. Such an engineered GPX-like biocatalyst based on the GSTU scaffold might serve as a catalytic bioscavenger for the detoxification of hazardous hydroperoxides. Furthermore, our results shed light on the evolution of GPXs and their structural and functional link with GSTs.
The Binding of HSPA8 and Mitochondrial ALDH2 Mediates Oxygen-Glucose Deprivation-Induced Fibroblast Senescence
Authors: Hui Wenting , Song Tongtong , Yu Ling , Chen Xia
Published: December 2023

Cellular senescence refers to the permanent and irreversible cessation of the cell cycle. Recently, it has gained significant interest as a promising target for preventing cardiovascular diseases. Aldehyde dehydrogenase 2 (ALDH2) is a mitochondrial enzyme that has been closely linked with an increased risk of cardiovascular diseases. In this study, bioinformatics analysis revealed that the signaling pathway for fibroblast senescence is significantly activated in mice after myocardial infarction (MI), and that ALDH2 might be a crucial molecule responsible for inducing this change. Therefore, we created an NIH3T3 fibroblast cell line oxygen-glucose deprivation (OGD) model to replicate the conditions of MI in vitro. We further revealed that decreased ALDH2 enzyme activity is a critical factor that affects fibroblast senescence after OGD, and the activation of ALDH2 can improve the mitochondrial damage caused by OGD. We identified Heat Shock 70-kDa Protein 8 (HSPA8) as an interacting protein of ALDH2 through co-immunoprecipitation (Co-IP) and mass spectrometry (MS) detection. Subsequently, our studies showed that HSPA8 translocates to the mitochondria after OGD, potentially binding to ALDH2 and inhibiting its enzyme activity. By transfecting siRNA to inhibit HSPA8 expression in cells, it was found that ALDH2 enzyme activity can be significantly increased, and the senescence characteristics induced by OGD in NIH3T3 cells can be improved. In conclusion, the data from this study suggest that HSPA8, in conjunction with ALDH2, could regulate fibroblast senescence after oxygen-glucose deprivation, providing a new direction and foundation for effectively intervening in fibroblast senescence after myocardial infarction.
The Developmentof Software to Automate the Laser Welding of a Liquefied Natural Gas Cargo Tank Using a Mobile Manipulator
Authors: Choi Taeyong , Park Jongwoo , Bak Jeongae , Park Dongil , Seo Hyunuk , Kim Sanghyun
Published: December 2023

The demand for liquefied natural gas (LNG) ships is increasing for various reasons. Despite their enormous size, cargo holds inside freighters transporting LNG have traditionally been constructed by welding to high-quality standards for safety. This process traditionally relies on manual labor or semi-automatic moving devices. In this study, a methodology was designed for robot-based automated laser welding inside large LNG cargo holds. The developed approach offers a practical solution to challenging issues such as the corrugation of the membrane that forms the inner walls of LNG cargo holds and the inter-floor movement of robots. This study analyzes and restructures the work for laser welding using mobile robots inside LNG cargo holds composed of membranes. For realistic constraints, such as inter-floor movement of robots and high-quality welding of membrane corrugations, methods integrated with manual work have been proposed. Additionally, for the overall membrane laser welding of the LNG cargo hold space, an automated method using robots was suggested. The developed methodology has been realized as operational software for the movement of robots for laser welding in LNG cargo holds.
Experimental Investigation of Lanthanum-Modified Reinforced Composite Material for Phosphorus Removal
Authors: Liu Yan , Zhu Lingfeng
Published: December 2023

Adsorption stands as an economically viable, efficient, recyclable, operationally straightforward, cost-effective, and low-sludge method extensively employed for phosphorus removal. In an effort to enhance the adsorption capabilities of the adsorbent, this study employs the rare-earth metal lanthanum in conjunction with the group’s previously researched high-efficiency composite industrial residue phosphorus removal materials (EPRC) for modification, thereby generating lanthanum-modified reinforced composite phosphorus removal materials (La-EPRC). Subsequently, the novel material undergoes static modification, followed by experimental investigations into static and dynamic adsorption for phosphorus removal. Static adsorption experiments reveal optimal phosphorus removal efficiency when the initial phosphorus solution concentration is 20 mgP/L, with a La-EPRC particle dosage of 3 g/250 mL and a temperature of 25 °C. The removal efficiency of phosphorus particles is above 90% within the pH range of 4 to 10. Common coexisting anions in water, including Cl−, SO42−, HCO3−, and CO32−, demonstrate minimal impact on the efficacy of phosphorus removal. La-EPRC demonstrates a robust adsorption stability in both water and hot water environments. In a 2.5 mol/L NaOH solution, effective desorption of La-EPRC particles is observed, facilitating material regeneration. The raw materials for La-EPRC are easily accessible and cost-effective, imparting significant potential for widespread applications.
A Simple, Inexpensive Alkaline Method for Bacterial DNA Extraction from Environmental Samples for PCR Surveillance and Microbiome Analyses
Authors: Shwani Abdulkarim , Zuo Bin , Alrubaye Adnan , Zhao Jiangchao , Rhoads Douglas D.
Published: December 2023

DNA extraction for downstream molecular diagnostic applications can be an expensive, time-consuming process. We devised a method to quickly extract total bacterial DNA from environmental samples based on the sodium hydroxide lysis of cells with or without capture by magnetic beads for subsequent PCR or quantitative PCR. The final DNA extraction method using NaOH is extremely low-cost and can be completed in as little as 10 min at room temperature with dilution, or the DNA can be further purified using silica-coated paramagnetic beads. NaOH extraction was effective for Gram-negative and Gram-positive bacteria in samples from air, soil, sewage, food, laboratory surfaces, and chicken cloacal swabs. The NaOH extraction method was comparable to commercial kits for extraction of DNA from pig fecal samples for 16S amplicon sequencing analyses. We demonstrated that an impinger and portable pump can efficiently capture bacteria from the air in poultry facilities for rapid NaOH extraction to quantify total bacteria and for detection of specific species using qPCR. The air sampling and NaOH extraction procedures are well suited for routine, high-throughput screening and for metagenomic analyses for specific pathogens, even in resource-limited situations.
3D Dynamics Deduction and the Spatial Geometric Characteristics of Ball Balance Positioning in Automatic Ball Balancers
Authors: Wang Ming-Cheng , Huang Chih-Ling
Published: December 2023

In order to explore the geometric characteristics of the dynamic balance positions of balls in any orbit in space, this paper first deduces the dynamic equilibrium equations of an eccentric rotor system with the automatic ball balancer (ABB) skew, mounted with a deflection angle from the perspective of three-dimensional (3D) dynamics. The results obtained are consistent with those derived from the Euler–Lagrange equations. It is exciting that the spatial dynamics method reveals the spatial-geometric characteristics of dynamic balance positioning of the balls when the system is balanced with vibration suppression. Then, through spatial geometric inference, it is proved that the balance positioning of any ball in an arbitrary curved track is characterized. This characteristic indicates that the perpendicular line from any balance position to the rotating spindle of the system must pass through the central axis of curvature of the track at that position. Finally, spatial graphics and numerical analysis are used to verify the theoretical correctness. The characteristics are general rules that can explain the phenomena of the stable equilibrium positions of the balls in previous studies under ideal assumptions.
Investigation of Geometric and Hardness Parameters of Tank Track Grooves Equipped on Photovoltaic Cleaning Robot
Authors: Nguyen Huy Hung , Truong Cong Toai , Ngoc Anh Duy Hoang , Nguyen Minh Tri , Duong Van Tu , Nguyen Tan Tien
Published: December 2023

The utilization of photovoltaic (PV) cleaning robots has proven to be an effective method for maintaining the conversion efficiency of utility-scale PV power plants by mitigating the impact of dust accumulation. However, ensuring the safe operation of these robots, resembling tanks in appearance, particularly in wet working conditions, relies heavily on their adherence to PV panels. This study focuses on assessing the slip resistance of candidate materials coated on endless polyurethane timing belts, which are equipped on PV cleaning robots to enable the efficient cleaning of uneven and misaligned PV arrays. A novel apparatus is proposed to evaluate the coefficient of static friction (COSF) of slip specimens, considering factors such as outsole patterns, area density, and shore hardness. The results highlight the significant influence of shore hardness and area density on the slip resistance of the specimens. Based on the findings, it is recommended to design track grooves with hexagon or zigzag patterns and maintain a low area density (e.g., 0.44 g·mm−2) to ensure the safe operation of PV cleaning robots, irrespective of the working conditions they encounter. By addressing the slip resistance challenge, this research contributes to the overall efficiency and reliability of PV cleaning robots, enhancing their performance in maintaining clean and optimal PV panel surfaces.
Development of Polymer-Cored Akaganeite Adsorbent for Phosphate Adsorption
Authors: Bae Jiyeol , We Hyobin , Kim Suho , Oh Sungjik , Baek Soyoung
Published: December 2023

Environmental issues related to phosphate and resource depletion have recently emerged as serious problems. This study focuses on solving the problems of phosphate removal and recovery using synthesized granular akaganeite (GAK). This study identified that akaganeite, which possesses an FeOOH structure in iron oxyhydroxide, can be synthesized and used as a reusable material. Immobilization with the core–shell method using polyethersulfone was applied as a strategy to recover phosphate anions from a trace of phosphate solution. GAK was successfully analyzed using SEM/TGA/BET to understand its physical properties. XRD and SAD pattern analyses suggested that the GAK powder form was amorphous in nature. The powdered akaganeite had a surface area of 231 mg2/g and a maximum adsorption capacity of 21.27 mg/g. To prevent the dispersion of powder during granulation, polyethersulfone was used as a scaffold since akaganeite particles can be effectively immobilized onto PES polymer scaffolds, as substantiated by the SEM/EDS results. Moreover, a lack of changes in the pore sizes suggested that physical properties remained unchanged. Furthermore, compared to the granular akaganeite, the surface area of powdered akaganeite decreased 4–5-fold. The adsorption kinetic of granular akaganeite fit the pseudo-second-order model. The powdered form displayed high removal efficiency, intimate with phosphate anions, when n > 1.0, instead of lower KF. On the other hand, granular akaganeite showed lower affinity when n < 1.0, but appeared positive for an adsorbate with higher KF. This implies that the granulation of akaganeite with the PES polymer did not change its adsorption property, with the maximum adsorption capacity for granular akaganeite being 3.65 mg/g.