bluuebunny/crossref_metadata_2025 huggingface dataset:
Pathogen spillover driven by rapid changes in bat ecology
Authors: Eby Peggy , Peel Alison J. , Hoegh Andrew , Madden Wyatt , Giles John R. , Hudson Peter J. , Plowright Raina K.
Published: November 2022

During recent decades, pathogens that originated in bats have become an increasing public health concern. A major challenge is to identify how those pathogens spill over into human populations to generate a pandemic threat1. Many correlational studies associate spillover with changes in land use or other anthropogenic stressors2,3, although the mechanisms underlying the observed correlations have not been identified4. One limitation is the lack of spatially and temporally explicit data on multiple spillovers, and on the connections among spillovers, reservoir host ecology and behaviour and viral dynamics. We present 25 years of data on land-use change, bat behaviour and spillover of Hendra virus from Pteropodid bats to horses in subtropical Australia. These data show that bats are responding to environmental change by persistently adopting behaviours that were previously transient responses to nutritional stress. Interactions between land-use change and climate now lead to persistent bat residency in agricultural areas, where periodic food shortages drive clusters of spillovers. Pulses of winter flowering of trees in remnant forests appeared to prevent spillover. We developed integrative Bayesian network models based on these phenomena that accurately predicted the presence or absence of clusters of spillovers in each of the 25 years. Our long-term study identifies the mechanistic connections between habitat loss, climate and increased spillover risk. It provides a framework for examining causes of bat virus spillover and for developing ecological countermeasures to prevent pandemics.
A biomechanics dataset of healthy human walking at various speeds, step lengths and step widths
Authors: van der Zee Tim J. , Mundinger Emily M. , Kuo Arthur D.
Published: November 2022

The biomechanics of human walking are well documented for standard conditions such as for self-selected step length and preferred speed. However, humans can and do walk with a variety of other step lengths and speeds during daily living. The variation of biomechanics across gait conditions may be important for describing and determining the mechanics of locomotion. To address this, we present an open biomechanics dataset of steady walking at a broad range of conditions, including 33 experimentally-controlled combinations of speed (0.7–2.0 m·s−1), step length (0.5–1.1 m), and step width (0–0.4 m). The dataset contains ground reaction forces and motions from healthy young adults (N = 10), collected using split-belt instrumented treadmill and motion capture systems respectively. Most trials also include pre-computed inverse dynamics, including 3D joint positions, angles, torques and powers, as well as intersegmental forces. Apart from raw data, we also provide five strides of good quality data without artifacts for each trial, and sample software for visualization and analysis.
Comprehensive dynamic and kinematic analysis of the rodent hindlimb during over ground walking
Authors: Dienes Jack , Hicks Brody , Slater Conrad , Janson Kevin D. , Christ George J. , Russell Shawn D.
Published: November 2022

The rat hindlimb is a frequently utilized pre-clinical model system to evaluate injuries and pathologies impacting the hindlimbs. These studies have demonstrated the translational potential of this model but have typically focused on the force generating capacity of target muscles as the primary evaluative outcome. Historically, human studies investigating extremity injuries and pathologies have utilized biomechanical analysis to better understand the impact of injury and extent of recovery. In this study, we expand that full biomechanical workup to a rat model in order to characterize the spatiotemporal parameters, ground reaction forces, 3-D joint kinematics, 3-D joint kinetics, and energetics of gait in healthy rats. We report data on each of these metrics that meets or exceeds the standards set by the current literature and are the first to report on all these metrics in a single set of animals. The methodology and findings presented in this study have significant implications for the development and clinical application of the improved regenerative therapeutics and rehabilitative therapies required for durable and complete functional recovery from extremity traumas, as well as other musculoskeletal pathologies.
Outcome of pulpotomy in permanent teeth with irreversible pulpitis: a systematic review and meta-analysis
Authors: Ather Amber , Patel Biraj , Gelfond Jonathan A. L. , Ruparel Nikita B.
Published: November 2022

Treatment planning is key to clinical success. Permanent teeth diagnosed with “irreversible pulpitis” have long been implied to have an irreversibly damaged dental pulp that is beyond repair and warranting root canal treatment. However, newer clinical approaches such as pulpotomy, a minimally invasive and biologically based procedure have re-emerged to manage teeth with pulpitis. The primary aim of the study was to conduct a meta-analysis to comprehensively estimate the overall success rate of pulpotomy in permanent teeth with irreversible pulpitis as a result of carious pulp exposure. The secondary aim of the study was to investigate the effect of predictors such as symptoms, root apex development (closed versus open), and type of pulp capping material on the success rate of pulpotomy. Articles were searched using PubMed, Scopus, CENTRAL, and Web of Science databases, until January 2021. Outcomes were calculated by pooling the success rates with a random effect model. Comparison between the different subgroups was conducted using the z statistic test for proportion with significance set at alpha = 0.05. A total of 1,116 records were retrieved and 11 studies were included in the quantitative analysis. The pooled success rate for pulpotomy in teeth with irreversible pulpitis was 86% [95% CI: 0.76–0.92; I2 = 81.9%]. Additionally, prognostic indicators of success were evaluated. Stratification of teeth based on (1) symptoms demonstrated that teeth with symptomatic and asymptomatic irreversible pulpitis demonstrated success rate of 84% and 91% respectively, with no significant difference (p = 0.18) using z-score analysis; (2) open apex teeth demonstrated a significantly greater success rate (96%) compared to teeth with closed apex (83%) (p = 0.02), and (3) pulp capping materials demonstrated that Biodentine yielded significantly better success rates compared to Mineral Trioxide Aggregate (MTA), calcium hydroxide, and Calcium Enriched Mixture (CEM.) Collectively, this is the first meta-analytical study to determine the clinical outcome of pulpotomy for carious teeth with irreversible pulpitis and it’s predictors for success. Moreover, we identify the stage of root development and type of biomaterial as predictors for success of pulpotomy.
Mechanical power is associated with weaning outcome in critically ill mechanically ventilated patients
Authors: Yan Yao , Xie Yongpeng , Chen Xiaobing , Sun Yan , Du Zhiqiang , Wang Yanli , Li Xiaomin
Published: November 2022

Several single-center studies have evaluated the predictive performance of mechanical power (MP) on weaning outcomes in prolonged invasive mechanical ventilation (IMV) patients. The relationship between MP and weaning outcomes in all IMV patients has rarely been studied. A retrospective study was conducted on MIMIC-IV patients with IMV for more than 24 h to investigate the correlation between MP and weaning outcome using logistic regression model and subgroup analysis. The discriminative ability of MP, MP normalized to dynamic lung compliance (Cdyn-MP) and MP normalized to predicted body weight (PBW-MP) on weaning outcome were evaluated by analyzing the area under the receiver-operating characteristic (AUROC). Following adjustment for confounding factors, compared with the reference group, the Odds Ratio of weaning failure in the maximum MP, Cdyn-MP, and PBW-MP groups increased to 3.33 [95%CI (2.04–4.53), P < 0.001], 3.58 [95%CI (2.27–5.56), P < 0.001] and 5.15 [95%CI (3.58–7.41), P < 0.001], respectively. The discriminative abilities of Cdyn-MP (AUROC 0.760 [95%CI 0.745–0.776]) and PBW-MP (AUROC 0.761 [95%CI 0.744–0.779]) were higher than MP (AUROC 0.745 [95%CI 0.730–0.761]) (P < 0.05). MP is associated with weaning outcomes in IMV patients and is an independent predictor of the risk of weaning failure. Cdyn-MP and PBW-MP showed higher ability in weaning failure prediction than MP.
Conductive cross-section preparation of non-conductive painting micro-samples for SEM analysis
Authors: Jaques Victory Armida Janine , Zikmundová Eva , Holas Jiří , Zikmund Tomáš , Kaiser Jozef , Holcová Katarína
Published: November 2022

Scanning electron microscopy (SEM) is a common method for the analysis of painting micro-samples. The high resolution of this technique offers precise surface analysis and can be coupled with an energy-dispersive spectrometer for the acquisition of the elemental composition. For light microscopy and SEM analysis, the painting micro-samples are commonly prepared as cross-sections, where the micro-sample positioned on the side is embedded in a resin. Therefore, the sequence of its layers is exposed after the cross-section is polished. In common cases outside of cultural heritage, a conductive layer is applied on the polished side, but in this field, the measurements are mostly done in low-vacuum SEM (LV-SEM). Although the charging effect is reduced in LV-SEM, it can still occur, and can hardly be prevented even with carbon tape or paint. This work presents two conductive cross-section preparation methods for non-conductive samples, which reduce charging effects without impairing the sample integrity.
Fragment-based virtual screening identifies a first-in-class preclinical drug candidate for Huntington’s disease
Authors: Galyan Simon Marius , Ewald Collin Y. , Jalencas Xavier , Masrani Shyam , Meral Selin , Mestres Jordi
Published: November 2022

Currently, there are no therapies available to modify the disease progression of Huntington’s disease (HD). Recent clinical trial failures of antisense oligonucleotide candidates in HD have demonstrated the need for new therapeutic approaches. Here, we developed a novel in-silico fragment scanning approach across the surface of mutant huntingtin (mHTT) polyQ and predicted four hit compounds. Two rounds of compound analoging using a strategy of testing structurally similar compounds in an affinity assay rapidly identified GLYN122. In vitro, GLYN122 directly binds and reduces mHTT and induces autophagy in neurons. In vivo, our results confirm that GLYN122 can reduce mHTT in the cortex and striatum of the R/2 mouse model of Huntington’s disease and subsequently improve motor symptoms. Thus, the in-vivo pharmacology profile of GLYN122 is a potential new preclinical candidate for the treatment of HD.
Bacteriological and serological investigation of Clostridium perfringens in lambs
Authors: Moustafa Shymaa , Zakaria Islam , Moustafa Abdelmoneim , AboSakaya Rania , Selim Abdelfattah
Published: November 2022

Clostridium perfringens is one of the most common and important pathogens in livestock due to its ability to produce a diverse arsenal of toxins. Owing to C. perfringens economic importance, this study aimed to determine the types and toxins of C. perfringens in newly born lambs. A total of 200 lambs of less than one-month old were examined, including 100 lambs suffered from diarrhea, 60 freshly dead and 40 apparent healthy. C. perfringens was identified morphologically and biochemically using bacteriological culture in 103 of 200 samples (51.5%). Moreover, serological typing of C. perfringens isolates revealed three serotypes, C. perfringens type A (54.2%), C. perfringens type B (28.8%) and C. perfringens type D (16.9%). The highest prevalence rate for C. perfringens infection was observed in winter (58.25%) in comparison with other seasons. The findings of the present study confirm the presence of enterotoxmia among lambs in localities under study, causing economic losses. The proper vaccination schedule particularly against C. perfringens type A and B is highly recommended.
Modelling of n-Hexadecane bioremediation from soil by slurry bioreactors using artificial neural network method
Authors: Morovati Roya , Abbasi Fariba , Samaei Mohammad Reza , Mehrazmay Hamid , Lari Ali Rasti
Published: November 2022

Diesel oil is known to be one of the major petroleum products that can pollute water and soil. Soil pollution caused by petroleum hydrocarbons has substantially impacted the environment, especially in the Middle East. In this study, modeling and optimization of hexadecane removal from soil was performed using two pure cultures of Acinetobacter and Acromobacter and consortium culture of both bacterial species using artificial neural network (ANN) method. Then the best ANN structure was proposed based on mean square error (MSE) as well as correlation coefficient (R) for pure cultures of Acinetobacter and Acromobacter as well as their consortium. The results showed that the correlations between the actual data and the data predicted by ANN (R2) in Acromobacter, Acinetobacter and consortium of both cultures were 0.50, 0.47 and 0.63, respectively. Despite the low correlation between the experimental data and the data predicted by the ANN, the correlation coefficient and the precision of ANN for the consortium was higher. As a result, ANN had desirable precision to predict hexadecan removal by the cobsertium culture of Ochromobater and Acintobacter.
Placental vascular alterations are associated with early neurodevelopmental and pulmonary impairment in the rabbit fetal growth restriction model
Authors: Valenzuela Ignacio , Basurto David , Regin Yannick , Gie Andre , van der Veeken Lennart , Vergote Simen , Muñoz-Moreno Emma , Leszczynski Bartosz , Tielemans Birger , Velde Greetje Vande , Deprest Jan , van der Merwe Johannes
Published: November 2022

Fetal growth restriction is one of the leading causes of perinatal mortality and morbidity and has consequences that extend well beyond the neonatal period. Current management relies on timely delivery rather than improving placental function. Several prenatal strategies have failed to show benefit in clinical trials after promising results in animal models. Most of these animal models have important developmental and structural differences compared to the human and/or are insufficiently characterized. We aimed to describe placental function and structure in an FGR rabbit model, and to characterize the early brain and lung developmental morbidity using a multimodal approach. FGR was induced in time-mated rabbits at gestational day 25 by partial uteroplacental vessel ligation in one horn. Umbilical artery Doppler was measured before caesarean delivery at gestational day 30, and placentas were harvested for computed microtomography and histology. Neonates underwent neurobehavioral or pulmonary functional assessment the day after delivery, followed by brain or lung harvesting, respectively. Neuropathological assessment included multiregional quantification of neuron density, apoptosis, astrogliosis, cellular proliferation, and oligodendrocyte progenitors. Brain region volumes and diffusion metrics were obtained from ex-vivo brain magnetic resonance imaging. Lung assessment included biomechanical tests and pulmonary histology. Fetal growth restriction was associated with labyrinth alterations in the placenta, driven by fetal capillary reduction, and overall reduced vessels volume. FGR caused altered neurobehavior paralleled by regional neuropathological deficits and reduced fractional anisotropy in the cortex, white matter, and hippocampus. In addition, FGR kittens presented functional alterations in the peripheral lung and structurally underdeveloped alveoli. In conclusion, in a uteroplacental insufficiency FGR rabbit model, placental vascular alterations coincide with neurodevelopmental and pulmonary disruption.
Climate change alters impacts of extreme climate events on a tropical perennial tree crop
Authors: Creedy Thomas J. , Asare Rebecca A. , Morel Alexandra C. , Hirons Mark , Mason John , Malhi Yadvinder , McDermott Constance L. , Opoku Emmanuel , Norris Ken
Published: November 2022

Anthropogenic climate change causes more frequent and intense fluctuations in the El Niño Southern Oscillation (ENSO). Understanding the effects of ENSO on agricultural systems is crucial for predicting and ameliorating impacts on lives and livelihoods, particularly in perennial tree crops, which may show both instantaneous and delayed responses. Using cocoa production in Ghana as a model system, we analyse the impact of ENSO on annual production and climate over the last 70 years. We report that in recent decades, El Niño years experience reductions in cocoa production followed by several years of increased production, and that this pattern has significantly shifted compared with prior to the 1980s. ENSO phase appears to affect the climate in Ghana, and over the same time period, we see corresponding significant shifts in the climatic conditions resulting from ENSO extremes, with increasing temperature and water stress. We attribute these changes to anthropogenic climate change, and our results illustrate the big data analyses necessary to improve understanding of perennial crop responses to climate change in general, and climate extremes in particular.
Experimental study on shear characteristics of the silty clay soil-ice interface
Authors: Huang Wanjun , Mao Xuesong , Wu Qian , Chen Linlin
Published: November 2022

During the spring thawing, the decrease of soil-ice interface strength by temperature may lead to slope instability. For this reason, some researchers have explored the relationship between temperature and soil-ice interface strength. However, previous studies have not systematically explored the change law of strength at the soil-ice interface from negative temperature to 0 °C. Therefore, direct shear tests were conducted at different shear temperatures and different moisture contents. The effects of temperature and moisture content on strength, cohesion, and internal friction angle are analyzed, while the shear failure mechanism of specimens at different temperatures is discussed according to the location of the shear failure surface. The results show that: Shear properties of soil ice specimens are related to the unfrozen moisture content. The strength of the sample decreases with increasing temperature, and the change in strength is most significant from − 2 to − 0 °C. The strength reduction in this range is from 21.8 to 74.8%, and the higher the moisture content the more obvious this phenomenon is. The shear index tends to decrease with the increase of unfrozen water content, and the greater the increase of unfrozen water, the faster the decrease of both, especially in stage 2. When the temperature is higher than − 5℃, the failure surface is located above the soil-ice interface, and the strength of the specimen is similar to that of the frozen soil. When the temperature is − 10℃, the shear damage surface appears at the soil-ice interface, and the strength of the specimen is determined by the strength of the soil-ice interface.
In vitro study of the modulatory effects of heat-killed bacterial biomass on aquaculture bacterioplankton communities
Authors: Sousa J. M. G. , Louvado A. , Coelho F. J. R. C. , Oliveira V. , Oliveira H. , Cleary D. F. R. , Gomes N. C. M.
Published: November 2022

Recent studies have shown that the addition of non-viable microbial biomass or their components (postbiotics) to fish feed can modulate the gut microbiome and positively influence fish health in aquaculture systems. However, no information was hitherto available on the use of non-viable microbial biomass to manipulate aquaculture bacterioplankton communities. To fill this gap, here we used an in vitro model to assess the effects of heat-killed biomasses of an antagonistic strain Pseudoalteromonas rubra SubTr2 and a non-antagonist strain Escherichia coli DH5α on bacterioplankton communities of a recirculating aquaculture system (RAS). Our results showed that these biomasses can have generalist and species-specific effects on aquaculture bacterioplankton structure and function. In addition, they enriched the abundance of bacterial predators, reduced bacterial load and potentially influenced nutrient cycling and pathogen development in aquaculture water. Despite its preliminary nature, for the first time, this study showed that heat-killed microbial biomass has potential application as an in situ modulator of bacterioplankton in aquaculture systems.
Birefringence-derived scleral artifacts in optical coherence tomography images of eyes with pathologic myopia
Authors: Miura Masahiro , Makita Shuichi , Yasuno Yoshiaki , Miki Atsuya , Nemoto Rei , Shimizu Hiroyuki , Azuma Shinnosuke , Mino Toshihiro , Yamaguchi Tatsuo
Published: November 2022

We investigated birefringence-derived scleral artifacts in optical coherence tomography (OCT) images of eyes with pathologic myopia. This study included 76 eyes of 42 patients with pathologic myopia. Five sets of OCT B-scan images of the macula were obtained using commercial swept-source OCT. A dataset of prototype swept-source polarization-diversity OCT images was used to identify polarization-dependent OCT images (i.e., complex averaging of OCT signals from two polarization channels) and polarization-independent OCT images (i.e., intensity averaging of two OCT signals). Polarization-dependent OCT images and commercial OCT images were assessed for the presence of birefringence-derived artifacts by comparison with polarization-independent OCT images. Both polarization-dependent OCT images and commercial OCT images contained scleral vessel artifacts. Scleral vessel artifacts were present in 46 of 76 eyes (60.5%) imaged by polarization-dependent OCT and 17 of 76 eyes (22.4%) imaged by commercial OCT. The proportion of images that showed scleral vessel artifacts was significantly greater among polarization-dependent OCT images than among commercial OCT images (P < 0.001). Additionally, polarization-dependent OCT images showed low-intensity band artifacts. This study demonstrated the existence of birefringence-derived scleral artifacts in commercial OCT images and indicated that polarization-diversity OCT is an effective tool to evaluate the presence of these artifacts.
Boosting brackish water treatment via integration of mesoporous γ-Al2O3NPs with thin-film nanofiltration membranes
Authors: Hassan Gamal K. , Al-Shemy Mona , Adel Abeer M. , Al-Sayed Aly
Published: November 2022

In this study, a simple method based on non-ionic surfactant polysorbates-80 was used to create mesoporous γ-Al2O3NPs. The properties of the prepared mesoporous alumina nanoparticles (Al2O3NPs) were verified using ATR-FTIR, XRD, SEM, TEM, DLS, and BET surface area analysis. Then, thin-film nanocomposite (TFN) nanofiltration membranes were fabricated by interfacial polymerization of embedded polyamide layers with varied contents (0.01 to 0.15 wt.%) of mesoporous γ-Al2O3NPs. The surface roughness, porosity, pore size, and contact angle parameters of all the prepared membranes were also determined. The performance of the fabricated membranes was investigated under various mesoporous γ-Al2O3NPs loads, time, and pressure conditions. Mesoporous γ-Al2O3NPs revealed an important role in raising both the membrane hydrophilicity and the surface negativity. The addition of 0.03 wt.% mesoporous γ-Al2O3NPs to the TFN membrane increased water flux threefold compared to the TF control (TFC) membrane, with maximum water flux reaching 96.5, 98, 60, and 52 L/(m2.h) for MgSO4, MgCl2, Na2SO4, and NaCl influent solutions, respectively, with the highest salt rejection of 96.5%, 92.2%, 98.4%. The TFN-Al2O3 membrane was also able to soften water and remove polyvalent cations such as Mg2+with a highly permeable flux. The TFN-Al2O3membrane successfully removed the hardness of the applied water samples below the WHO limit compared to using merely the TFC membrane. Furthermore, the TFN-Al2O3nanofiltration membrane unit proved to be a promising candidate for the desalination of real brine like that collected from the Safaga area, Egypt.
Association between SARS-CoV-2 RNAemia and dysregulated immune response in acutely ill hospitalized COVID-19 patients
Authors: Rovito Roberta , Bono Valeria , Augello Matteo , Tincati Camilla , Mainoldi Federica , Beaudoin-Bussières Guillaume , Tauzin Alexandra , Bianchi Silvia , Hadla Mohamad , Yellenki Vaibhav , d’Arminio Monforte Antonella , Casola Stefano , Borghi Elisa , Finzi Andrés , Marchetti Giulia
Published: November 2022

Severe/critical COVID-19 is associated with immune dysregulation and plasmatic SARS-CoV-2 detection (i.e. RNAemia). We detailed the association of SARS-CoV-2 RNAemia with immune responses in COVID-19 patients at the end of the first week of disease. We enrolled patients hospitalized in acute phase of ascertained SARS-CoV-2 pneumonia, and evaluated SARS-CoV-2 RNAemia, plasmatic cytokines, activated/pro-cytolytic T-cells phenotypes, SARS-CoV-2-specific cytokine-producing T-cells (IL-2, IFN-γ, TNF-α, IL-4, IL-17A), simultaneous Th1-cytokines production (polyfunctionality) and amount (iMFI). The humoral responses were assessed with anti-S1/S2 IgG, anti-RBD total-Ig, IgM, IgA, IgG1 and IgG3, neutralization and antibody-dependent cellular cytotoxicity (ADCC). Out of 54 patients, 27 had detectable viremia (viremic). Albeit comparable age and co-morbidities, viremic more frequently required ventilatory support, with a trend to higher death. Viremic displayed higher pro-inflammatory cytokines (IFN-α, IL-6), lower activated T-cells (HLA-DR+CD38+), lower functional SARS-CoV-2-specific T-cells (IFN-γ+CD4+, TNF-α+CD8+, IL-4+CD8+, IL-2+TNF-α+CD4+, and IL-2+TNF-α+CD4+ iMFI) and SARS-CoV-2-specific Abs (anti-S IgG, anti-RBD total-Ig, IgM, IgG1, IgG3; ID50, %ADCC). These data suggest a link between SARS-CoV-2 RNAemia at the end of the first stage of disease and immune dysregulation. Whether high ab initium viral burden and/or intrinsic host factors contribute to immune dysregulation in severe COVID-19 remains to be elucidated, to further inform strategies of targeted therapeutic interventions.
A controlled before-and-after study of a multi-modal intervention to improve hand hygiene during the peri-natal period in Cambodia
Authors: Nalule Yolisa , Pors Ponnary , Samol Channa , Ret Senghort , Leang Supheap , Ir Por , Macintyre Alison , Dreibelbis Robert
Published: November 2022

Adequate hand hygiene practices throughout the continuum of care of maternal and newborn health are essential for infection prevention. However, the hand hygiene compliance of facility-based birth attendants, parents and other caregivers along this continuum is low and behavioural-science informed interventions targeting the range of caregivers in both the healthcare facility and home environments are scarce. We assessed the limited efficacy of a novel multimodal behaviour change intervention, delivered at the facility, to improve the hand hygiene practices among midwives and caregivers during childbirth through the return to the home environment. The 6-month intervention was implemented in 4 of 8 purposively selected facilities and included environmental restructuring, hand hygiene infrastructure provision, cues and reminders, and participatory training. In this controlled before-and-after study, the hand hygiene practices of all caregivers present along the care continuum of 99 women and newborns were directly observed. Direct observations took place during three time periods; labour, delivery and immediate aftercare in the facility delivery room, postnatal care in the facility ward and in the home environment within the first 48 h following discharge. Multilevel logistic regression models, adjusted for baseline measures, assessed differences in hand hygiene practices between intervention and control facilities. The intervention was associated with increased odds of improved practice of birth attendants during birth and newborn care in the delivery room (Adjusted odds ratio [AOR] = 4.7; 95% confidence interval [CI] = 2.7, 7.7), and that of parental and non-parental caregivers prior to newborn care in the post-natal care ward (AOR = 9.2; CI = 1.3, 66.2); however, the absolute magnitude of improvements was limited. Intervention effects were not presented for the home environment due COVID-19 related restrictions on observation duration at endline which resulted in too low observation numbers to warrant testing. Our results suggest the potential of a facility-based multimodal behaviour change intervention to improve hand hygiene practices that are critical to maternal and neonatal infection along the continuum of care.
Effects of climatic factors on COVID-19 transmission in Ethiopia
Authors: Endeshaw Fitsum Bekele , Getnet Fentabil , Temesgen Awoke Misganaw , Mirkuzie Alemnesh H. , Olana Latera Tesfaye , Alene Kefyalew Addis , Birhanie Solomon Kibret
Published: November 2022

Climatic conditions play a key role in the transmission and pathophysiology of respiratory tract infections, either directly or indirectly. However, their impact on the COVID-19 pandemic propagation is yet to be studied. This study aimed to evaluate the effects of climatic factors such as temperature, rainfall, relative humidity, sunshine duration, and wind speed on the number of daily COVID-19 cases in Addis Ababa, Ethiopia. Data on confirmed COVID-19 cases were obtained from the National Data Management Center at the Ethiopian Public Health Institute for the period 10th March 2020 to 31st October 2021. Data for climatic factors were obtained from the Ethiopia National Meteorology Agency. The correlation between daily confirmed COVID-19 cases and climatic factors was measured using the Spearman rank correlation test. The log-link negative binomial regression model was used to fit the effect of climatic factors on COVID-19 transmission, from lag 0 to lag 14 days. During the study period, a total of 245,101 COVID-19 cases were recorded in Addis Ababa, with a median of 337 new cases per day and a maximum of 1903 instances per day. A significant correlation between COVID-19 cases and humidity was observed with a 1% increase in relative humidity associated with a 1.1% [IRRs (95%CI) 0.989, 95% (0.97–0.99)] and 1.2% [IRRs (95%CI) 0.988, (0.97–0.99)] decrease in COVID-19 cases for 4 and 5 lag days prior to detection, respectively. The highest increase in the effect of wind speed and rainfall on COVID-19 was observed at 14 lag days prior to detection with IRRs of 1.85 (95%CI 1.26–2.74) and 1.078 (95%CI 1.04–1.12), respectively. The lowest IRR was 1.109 (95%CI 0.93–1.31) and 1.007 (95%CI 0.99–1.02) both in lag 0, respectively. The findings revealed that none of the climatic variables influenced the number of COVID-19 cases on the day of case detection (lag 0), and that daily average temperature and sunshine duration were not significantly linked with COVID-19 risk across the full lag period (p > 0.05). Climatic factors such as humidity, rainfall, and wind speed influence the transmission of COVID-19 in Addis Ababa, Ethiopia. COVID-19 cases have shown seasonal variations with the highest number of cases reported during the rainy season and the lowest number of cases reported during the dry season. These findings suggest the need to design strategies for the prevention and control of COVID-19 before the rainy seasons.
The control of malaria vectors in rice fields: a systematic review and meta-analysis
Authors: Chan Kallista , Bottomley Christian , Saito Kazuki , Lines Jo , Tusting Lucy S.
Published: November 2022

The relatively stable aquatic conditions of irrigated lowland and rainfed rice, which is grown across 145 million hectares in more than 100 countries, are capable of generating large numbers of mosquito vectors of malaria, which causes more than 400,000 deaths per year worldwide. Many methods can control these vectors, but a systematic review has not previously been conducted. This study assesses whether larviciding, fish or intermittent irrigation can significantly reduce malaria vectors in rice fields whilst increasing rice yield. After a literature search for studies reporting the effect of larval control and rice cultivation practices on malaria vector densities in rice fields, 33 studies were eligible for meta-analysis. Larviciding was effective at reducing rice-field malaria vectors. Pooled analysis of five controlled time-series (CTS) studies with chemical insecticides showed an overall combined reduction of larval densities of 77% compared to no larviciding. Eight CTSs with biological larvicides showed a pooled reduction of 60% compared to no larviciding. Cultivating rice and fish together provided good control too: a pooled analysis of three CTSs showed an overall 82% reduction in anopheline larvae compared to no fish. Pooled analysis of four studies suggested that intermittent irrigation (using various timings and frequencies of drainage) is effective at reducing the abundance of late-stage anopheline larvae (pooled reduction = − 35%), but not overall immature abundance, compared to continuous flooding. We conclude that many interventions such as larvicides, fish and intermittent irrigation can provide riceland malaria vector control, but the critical obstacle to wider use is farmer acceptability. Future research should be led by the agricultural sector, with inputs from entomologists, to investigate malaria control co-benefits within high-yielding rice cultivation practices.
Ferroptosis inhibition by deferiprone, attenuates myelin damage and promotes neuroprotection in demyelinated optic nerve
Authors: Rayatpour Atefeh , Foolad Forough , Heibatollahi Motahareh , Khajeh Khosro , Javan Mohammad
Published: November 2022

Multiple sclerosis (MS) is a chronic inflammatory disease, which leads to focal demyelination in the brain and spinal cord. Studies showed that iron released during the course of myelin breakdown exacerbates tissue damage, which is in agreement with the features of iron-dependent cell death, ferroptosis. Here, we aimed to investigate the possible contribution of ferroptosis in the demyelinated optic nerve, and to explore the effectiveness of ferroptosis inhibitor, deferiprone (DFP), on the extent of demyelination, inflammation and axonal damage. For this purpose, focal demyelination was induced by injection of lysolecithin (LPC), into the optic nerve of male C57BL/6J mice. Afterward, optic nerves were harvested at different time points from as early as 6 h up to 7 days post-LPC injection. Next, to evaluate the effectiveness of DFP two groups of animals received daily intraperitoneal injection of DFP for 3 or 7 continuous days. Vehicle groups received saline. Iron deposition was observed at different time points post-LPC injection from 6 h to 7 days post injection. Examining ferroptosis markers showed a significant reduction in glutathione content along with increased level of malondialdehyde and upregulated ferroptosis marker genes at early time points after injection. Besides, DFP treatment during the inflammatory phase of the model resulted in decreased microgliosis and inflammation. Reduced demyelination, microgliosis and astrogliosis was shown in mice that received DFP for 7 days. Moreover, DFP protected against axonal damage and retinal ganglion cells loss. Our results suggest the possible contribution of ferroptosis pathway in the process of demyelination. The therapeutic strategies targeting iron deposition, e.g. DFP treatment might thus represent a promising therapeutic target for patients with MS.
Tidal effects on periodical variations in the occurrence of singing humpback whales in coastal waters of Chichijima Island, Ogasawara, Japan
Authors: Tsujii Koki , Akamatsu Tomonari , Okamoto Ryosuke , Mori Kyoichi , Mitani Yoko
Published: November 2022

Marine organisms inhabiting coastal waters are known to be driven by periodic cycles such as diel, tidal, and seasonal changes. Humpback whales (Megaptera novaeangliae) breed in shallow and warm coastal waters, with males singing complex songs during the breeding season. To investigate periodic variations in humpback whale singing activities, we conducted fixed passive acoustic monitoring in the Ogasawara (Bonin) Islands, Japan, from winter to spring during 2016–2018. The singing activity and individual number of singers were observed throughout the day and night using a very long baseline passive acoustic array. The occurrence of singers peaked before sunrise and in the evening and was reduced during the daytime. The frequency of song reception depended on the tidal phase. A generalised additive model demonstrated that the occurrence of singers increased during the flood tide and decreased during the ebb tide in the waters west of Chichijima Island. These results suggest that the singing behaviour of humpback whales in breeding areas is affected by the diel and tidal cycles. Male humpback whales may change their behaviour or singing location depending on the strength and direction of the tidal current, considering that the selection of a stable location is beneficial for singing whales.
The progressive ratio and fixed ratio 1 schedules of cocaine self-administration in rats convey the same information
Authors: Tsibulsky Vladimir L. , Norman Andrew B.
Published: November 2022

Progressive ratio (PR) schedules of drug delivery are used to determine the ‘motivational’ state of an animal and drug ‘reinforcing efficacy’. This widely held interpretation is supported mainly by the observation that the PR breakpoint (BP) is proportional to the unit dose of self-administered drug. The compulsion zone theory of cocaine self-administration was applied to determine whether it can explain the pattern of lever-pressing behavior and cocaine injections under the PR schedule in rats. This theory states that cocaine induces lever pressing when levels are below the satiety threshold and above the priming/remission threshold. Rats were trained to self-administer cocaine on a fixed ratio FR1 schedule over a range of cocaine unit doses. Then they were switched to a PR schedule. Typical for the self-administration under a PR schedule, long post-injection pauses occurred when calculated cocaine levels were in the satiety zone. The compulsion zone theory interprets BP simply as the maximal number of responses which rats can perform after an injection while cocaine levels remain within the compulsion zone. The thresholds delineating the compulsion zone were very stable and independent of the self-administration schedule. PR and fixed ratio schedules convey the same pharmacokinetic/pharmacodynamic information, i.e., these two schedules are invariant.
Sudden quench of harmonically trapped mass-imbalanced fermions
Authors: Nandy Dillip K. , Sowiński Tomasz
Published: November 2022

Dynamical properties of two-component mass-imbalanced few-fermion systems confined in a one-dimensional harmonic trap following a sudden quench of interactions are studied. It is assumed that initially the system is prepared in the non-interacting ground state and then, after a sudden quench of interactions, the unitary evolution is governed by interacting many-body Hamiltonian. By careful analysis of the evolution of the Loschmidt echo, density distributions of the components, and entanglement entropy between them, the role of mass imbalance and particle number imbalance on the system’s evolution stability are investigated. All the quantities studied manifest a dramatic dependence on the number of heavy and lighter fermions in each component at a given quench strength. The results may have implications for upcoming experiments on fermionic mixtures with a well-defined and small number of particles.
Effects of cannabidiol on vacuous chewing movements, plasma glucose and oxidative stress indices in rats administered high dose risperidone
Authors: Kajero Jaiyeola Abiola , Seedat Soraya , Ohaeri Jude , Akindele Abidemi , Aina Oluwagbemiga
Published: November 2022

Atypical antipsychotics, despite their rapid dissociation from dopamine receptors and reduced tendency to induce oxidative stress, have been associated with difficult-to-manage movement disorders, including tardive dyskinesia (TD). The study set out to investigate the effects of cannabidiol (CBD), a potent antioxidant, on risperidone-induced behavioural and motor disturbances; namely vacuous chewing movements (VCM), and oxidative stress markers (e.g. superoxide dismutase (SOD), catalase (CAT), reduced glutathione (GSH), malondialdehyde (MDA), Nitric oxide (NO), and DPPH (2,2-diphenyl-1-picrylhydrazyl)). Oral risperidone (10 mg/kg) or oral CBD (5 mg/kg) were administered to six experimental groups. While risperidone alone was administered for 28 days, CBD concomitantly or in sequential order with risperidone, was administered for 28 days; and CBD alone was administered for 21 days. Behavioural, motor, and specific biochemical parameters, which included VCM, muscle tone, fasting blood sugar (FBS), and oxidative stress markers were assessed at different time points after the last dose of medication. Oral CBD (5 mg/kg) significantly reduced risperidone-induced elevated FBS when given after the administration of risperidone. Oral CBD also had effects on VCM when administered before risperidone and similarly, attenuated risperidone-induced increased muscle tone. It was also established that concomitant or sequential administration of CBD and risperidone did not have any adverse effects on cognition or locomotion. Both CBD and risperidone increased the activity of antioxidant enzymes and decreased the activity of pro-oxidant enzymes. This study suggests CBD could mitigate metabolic dysregulation and extrapyramidal side effects associated with risperidone without producing cognitive impairments.
Alcohol consumption and its associated factors among adolescents in a rural community in central Thailand: a mixed-methods study
Authors: Pramaunururut Pichak , Anuntakulnathee Pijak , Wangroongsarb Piti , Vongchansathapat Thanapat , Romsaithong Kullanith , Rangwanich Jareewan , Nukaeow Nuttamon , Chansaenwilai Poonyawee , Greeviroj Ploynaphat , Worawitrattanakul Pimchanok , Rojanaprapai Pamornwat , Tantisirirux Veerapatra , Thakhampaeng Pongpisut , Rattanasumawong Wanida , Rangsin Ram , Mungthin Mathirut , Sakboonyarat Boonsub
Published: November 2022

Early onset of alcohol use was associated with alcohol dependence and other health problems. We aimed to identify the prevalence and factors associated with alcohol consumption among adolescents in a rural community in Thailand. A mixed-methods study was carried out in 2021 using an explanatory sequential design. The study enrolled a total of 413 adolescents. On average, young adolescents initiated alcohol consumption at age 13. The lifetime drinking prevalence among adolescents was 60.5%, while the 1-year drinking prevalence was 53.0%. The prevalence of hazardous drinking among current drinkers was 42.0%. Alcohol consumption was associated with females (adjusted prevalence ratio (APR): 1.19; 95% CI 1.01–1.41), age ≥ 16 years (APR: 1.28; 95% CI 1.09–1.50), having close friends consuming alcohol (APR: 1.75; 95% CI 1.43–2.14), night out (APR: 1.93; 95% CI 1.53–2.45), being a current smoker (APR: 1.39; 95% CI 1.15–1.69), and having relationship (with boyfriend/girlfriend) problems (APR: 1.18; 95% CI 1.01–1.38). Qualitative data demonstrated that individual and environmental factors, including friends, family, social media use, and alcohol accessibility, affect alcohol use in this population. Therefore, effective strategies should be implemented across multiple levels of the socio-ecological model simultaneously to alleviate alcohol consumption and attenuate its complications.
Functional immunophenotyping of children with critical status asthmaticus identifies differential gene expression responses in neutrophils exposed to a poly(I:C) stimulus
Authors: Grunwell Jocelyn R. , Rad Milad G. , Stephenson Susan T. , Mohammad Ahmad F. , Opolka Cydney , Fitzpatrick Anne M. , Kamaleswaran Rishikesan
Published: November 2022

The host immune response to a viral immune stimulus has not been examined in children during a life-threatening asthma attack. We determined whether we could identify clusters of children with critical asthma by functional immunophenotyping using an intracellular viral analog stimulus. We performed a single-center, prospective, observational cohort study of 43 children ages 6–17 years admitted to a pediatric intensive care unit for an asthma attack between July 2019 to February 2021. Neutrophils were isolated from children, stimulated overnight with LyoVec poly(I:C), and mRNA was analyzed using a targeted Nanostring immunology array. Network analysis of the differentially expressed transcripts for the paired LyoVec poly(I:C) samples was performed. We identified two clusters by functional immunophenotyping that differed by the Asthma Control Test score. Cluster 1 (n = 23) had a higher proportion of children with uncontrolled asthma in the four weeks prior to PICU admission compared with cluster 2 (n = 20). Pathways up-regulated in cluster 1 versus cluster 2 included chemokine receptor/chemokines, interleukin-10 (IL-10), IL-4, and IL-13 signaling. Larger validation studies and clinical phenotyping of children with critical asthma are needed to determine the predictive utility of these clusters in a larger clinical setting.
Predictive value of shock index variants on 30-day mortality of trauma patients in helicopter emergency medical services: a nationwide observational retrospective multicenter study
Authors: Iirola Timo , Björkman Johannes , Laaksonen Mikael , Nurmi Jouni
Published: November 2022

The original shock index (SI) has been further developed to increase its prognostic value. We aimed to evaluate the predictive value of different SI variants on 30-day mortality among severely injured trauma patients in pre-hospital critical care settings. Adult trauma patients in the national Helicopter Emergency Medical Services (HEMS) registry were evaluated based on the primary outcome of 30-day mortality. SI, SIA (SI multiplied by age), SI/G (SI divided by Glasgow Coma Scale (GCS)), SIA/G (SI multiplied by age and divided by GCS), and SS (SI divided by oxygen saturation) were calculated based on the first vital signs measured at the time of HEMS contact. The area under the receiver operating curve (AUROC) was calculated for each SI variant. In total 4108 patients were included in the study. The overall 30-day mortality was 13.5%. The SIA/G and SI/G had the highest predictive ability (AUROC 0.884 [95% CI 0.869–0.899] and 0.8000 [95% CI 0.7780–0.8239], respectively). The SIA/G yielded good predictive performance between 30-day survivors and non-survivors in the pre-hospital critical care setting.