bluuebunny/crossref_metadata_2025 huggingface dataset:
The Prevalence and Morphology-Wise Demographic Distribution of Ponticulus Posticus on CT Scans—A Retrospective Observational Study
Authors: Nedelcu Alin Horatiu , Hutanu Andrada , Nedelcu Irina , Partene Vicoleanu Simona , Statescu Gabriel , Gavril Liviu , Haliciu Ana Maria , Ursaru Manuela , Tarniceriu Cristina Claudia
Published: March 2023

Background and Objectives: The ponticulus posticus (PP) is a bony bridge that emerges from the posterior aspect of the superior articular process, to connect the posterior arch of the atlas. It is often associated with neurological symptoms. The aim of this study was to obtain an insight into this malformation, and prevalence in the North East region of the Romanian population. Materials and methods: This anatomical variant was analyzed through an observational and retrospective study which was carried out in St. Spiridon Hospital Iasi. The duration of the study was 10 months and, a number of 487 patients who presented neurological symptoms without cranio-cerebral traumatisms were enrolled and a computed tomography (CT) scan was performed. We proposed a new classification of PP in five types. The prevalence of PP was calculated and Skewness test, ANOVA test with Bonferroni correction, and Student’s t-test were used for statistical analysis. Results: Among the sample of 487 patients, PP was found in 170 cases (34.90%) in an age group of 8–90 years (mean age = 59.52 years, SD ± 19.94 years). Type I was found in 11.29%, followed by Type II—8.21%, Type III—5.13%, Type IV—5.54%, and Type V—4.72% (p = 0.347). It was 19.5%, mirroring the incomplete type, whereas the complete type was reported in 15.40% of cases (p = 0.347), the highest prevalence, namely 41.17% was found in the “41 to 60 years” age group, followed by 36.95% in the “21 to 40 years” group (p = 0.00148). The mean age was higher in patients with PP Type III (61.16 years, SD ± 19.98), while patients with PP Type V recorded the lowest mean age (56.48 years, SD ± 22.13). The differences between the comparative average ages on types were not statistically significant (p = 0.411). The gender and age were not good predictors of PP Type V (AUC < 0.600). Conclusion: according to our study, incomplete types of PP were found to be more prevalent as compared to complete types. No difference between males and females was detected. PP is more frequent in adults and young adults than in the elderly population. It is confirmed that gender and age were not good predictors of the bilateral complete type of PP.
Elevated Levels of Plasma Collagen Triple Helix Repeat Containing 1 (CTHRC1) Are Strongly Associated with eGFR and Albuminuria in Chronic Kidney Disease
Authors: Baiken Yeldar , Markhametova Zhannur , Ashimova Assem , Zhulamanova Ainur , Nogaibayeva Assem , Kozina Larissa , Matkarimov Bakhyt , Aituov Bauyrzhan , Gaipov Abduzhappar , Myngbay Askhat
Published: March 2023

Background: Chronic kidney disease (CKD) has various etiologies, making it impossible to fully understand its complex pathophysiology. Elevated levels of plasma creatinine, proteinuria, and albuminuria and declined eGFR are traits observed in CKD patients. The current study attempts to highlight the collagen triple helix repeat containing 1 (CTHRC1) protein as a putative blood biomarker for CKD in addition to existing recognized indicators of CKD progression. Methods: A total of 26 CKD patients and 18 healthy controls were enrolled in this study. Clinical characteristics and complete blood and biochemical analyses were collected, and human ELISA kits were used to detect possible CKD biomarkers. Results: The study’s findings showed that CTHRC1 correlates with key clinical markers of kidney function such as 24 h urine total protein, creatinine, urea, and uric acid. In addition, CTHRC1 demonstrated a strong significant difference (p ≤ 0.0001) between the CKD and control group. Conclusions: Our research demonstrates that the plasma level of CTHRC1 can distinguish between those with CKD and healthy patients. Plasma CTHRC1 levels may aid in the diagnosis of CKD given the current state of knowledge, and these results call for further investigation in a wider, more diverse patient group.
Prevalence of Latent Tuberculosis Infection among Patients Undergoing Regular Hemodialysis in Disenfranchised Communities: A Multicenter Study during COVID-19 Pandemic
Authors: Ismail Mohamad Bachar , Zarriaa Nesrine , Osman Marwan , Helfawi Safa , Kabbara Nabil , Chatah Abdel Nasser , Kamaleddine Ahmad , Alameddine Rashad , Dabboussi Fouad , Hamze Monzer
Published: March 2023

Background and Objectives: Due to their weakened immune response, hemodialysis (HD) patients with latent tuberculosis infection (LTBI) are at higher risk for active tuberculosis (TB) disease and are more subject to patient-to-patient transmission within dialysis units. Consequently, current guidelines advocate screening these patients for LTBI. To our knowledge, the epidemiology of LTBI in HD patients has never been examined before in Lebanon. In this context, this study aimed to determine LTBI prevalence among patients undergoing regular HD in Northern Lebanon and to identify potential factors associated with this infection. Notably, the study was conducted during the COVID-19 pandemic, which is likely to have catastrophic effects on TB and increase the risk of mortality and hospitalization in HD patients. Materials and Methods: A multicenter cross-sectional study was carried out in three hospital dialysis units in Tripoli, North Lebanon. Blood samples and sociodemographic and clinical data were collected from 93 HD patients. To screen for LTBI, all patient samples underwent the fourth-generation QuantiFERON-TB Gold Plus assay (QFT-Plus). Multivariable logistic regression analysis was used to identify the predictors of LTBI status in HD patients. Results: Overall, 51 men and 42 women were enrolled. The mean age of the study population was 58.3 ± 12.4 years. Nine HD patients had indeterminate QFT-Plus results and were therefore excluded from subsequent statistical analysis. Among the remaining 84 participants with valid results, QFT-Plus was positive in 16 patients, showing a positivity prevalence of 19% (95% interval for p: 11.3%, 29.1%). Multivariable logistic regression analysis showed that LTBI was significantly associated with age [OR = 1.06; 95% CI = 1.01 to 1.13; p = 0.03] and a low-income level [OR = 9.29; 95% CI = 1.62 to 178; p = 0.04]. Conclusion: LTBI was found to be prevalent in one in five HD patients examined in our study. Therefore, effective TB control measures need to be implemented in this vulnerable population, with special attention to elderly patients with low socioeconomic status.
Association of Different Risk Scores and 30-Day Mortality in Kidney Transplant Recipients with COVID-19
Authors: Domjanović Josipa , Domjanović Škopinić Tea , Matetic Andrija
Published: March 2023

Background and Objectives: Clinical risk scores were poorly examined in kidney transplant recipients (KTR) with COVID-19. Materials and Methods: This observational study compared the association and discrimination of clinical risk scores (MEWS, qCSI, VACO, PSI/PORT, CCI, MuLBSTA, ISTH-DIC, COVID-GRAM and 4C) with 30-day mortality in 65 hospitalized KTRs with COVID-19. Cox regression was used to derive hazard ratios (HR) and 95% confidence intervals (95% CI), and discrimination was assessed by Harrell’s C. Results: A significant association with 30-day mortality was demonstrated for MEWS (HR 1.65 95% CI 1.21–2.25, p = 0.002); qCSI (HR 1.32 95% CI 1.15–1.52, p < 0.001); PSI/PORT (HR 1.04 95% CI 1.02–1.07, p = 0.001); CCI (HR 1.79 95% CI 1.13–2.83, p = 0.013); MuLBSTA (HR 1.31 95% CI 1.05–1.64, p = 0.017); COVID-GRAM (HR 1.03 95% CI 1.01–1.06, p = 0.004); and 4C (HR 1.79 95% CI 1.40–2.31, p < 0.001). After multivariable adjustment, significant association persisted for qCSI (HR 1.33 95% CI 1.11–1.59, p = 0.002); PSI/PORT (HR 1.04 95% CI 1.01–1.07, p = 0.012); MuLBSTA (HR 1.36 95% CI 1.01–1.85, p = 0.046); and 4C Mortality Score (HR 1.93 95% CI 1.45–2.57, p < 0.001) risk scores. The best discrimination was observed with the 4C score (Harrell’s C = 0.914). Conclusions: Risk scores such as qCSI, PSI/PORT and 4C showed the best association with 30-day mortality amongst KTRs with COVID-19.
Robot-Assisted Kyphoplasty versus Fluoroscopy-Assisted Kyphoplasty: A Meta-Analysis of Postoperative Outcomes
Authors: Chang Yu , Chen Wei-Cheng , Chi Kuan-Yu , Huang Abel Po-Hao , Jhang Shang-Wun , Sun Li-Wei , Chen Chien-Min
Published: March 2023

Osteoporotic vertebral compression fractures are the most common manifestation of osteoporosis. Percutaneous kyphoplasty (PKP) can lead to both pain improvement and correction of kyphosis secondary to collapsed vertebral bodies. Robot-assisted (RA) PKP has been reported to provide better vertebral body fracture correction than conventional fluoroscopy-assisted (FA) PKP. The aim of this meta-analysis is to compare clinical outcomes of RA PKP versus FA PKP. The Pubmed, Embase, and MEDLINE electronic databases were searched from January 1900 to December 2022, with no language restrictions for relevant articles. We extracted the preoperative and postoperative mean pain score and standard deviation from the included studies and pooled them using an inverse variance method. Statistical analyses were performed using functions available in the metafor package in R software. The results of this meta-analysis were summarized with weighted mean differences (WMDs). Our search strategy identified 181 references from the Pubmed, Embase, and MEDLINE electronic databases. We excluded duplicates and irrelevant references, after screening titles and abstracts. The remaining 12 studies were retrieved for full-text review, and, finally, we included five retrospective cohort studies from 2015 to 2021, comprising 223 patients undergoing RA PKP and 246 patients undergoing FA PKP. No difference was found in subgroup analysis based on the timing of postoperative pain assessment, despite the overall estimate of postoperative pain indicating a significant difference between the RA PKP and FA PKP groups (WMD, −0.22; 95% CI, −0.39 to −0.05). The long-term pain assessment revealed a significantly lower VAS in the RA PKP group than the FA PKP group at six months postoperatively (WMD, −0.15; 95% CI, −0.30 to −0.01), but no difference between the subgroups at three (WMD, 0.06; 95% CI, −0.41 to −0.54) and twelve months (WMD, −0.10; 95% CI, −0.50 to 0.30) postoperatively. Our meta-analysis revealed no significant difference in postoperative pain between RA PKP and FA PKP. Patients undergoing RA PKP had better pain improvement compared to FA PKP at 6 months postoperatively. However, further studies focusing on long-term outcomes in patients undergoing RA PKP are warranted to clarify its benefit, given the small number of included studies.
Directly Using Ti3C2Tx MXene for a Solid-Contact Potentiometric pH Sensor toward Wearable Sweat pH Monitoring
Authors: Liang Rongfeng , Zhong Lijie , Zhang Yirong , Tang Yitian , Lai Meixue , Han Tingting , Wang Wei , Bao Yu , Ma Yingming , Gan Shiyu , Niu Li
Published: March 2023

The level of hydrogen ions in sweat is one of the most important physiological indexes for the health state of the human body. As a type of two-dimensional (2D) material, MXene has the advantages of superior electrical conductivity, a large surface area, and rich functional groups on the surface. Herein, we report a type of Ti3C2Tx-based potentiometric pH sensor for wearable sweat pH analysis. The Ti3C2Tx was prepared by two etching methods, including a mild LiF/HCl mixture and HF solution, which was directly used as the pH-sensitive materials. Both etched Ti3C2Tx showed a typical lamellar structure and exhibited enhanced potentiometric pH responses compared with a pristine precursor of Ti3AlC2. The HF-Ti3C2Tx disclosed the sensitivities of −43.51 ± 0.53 mV pH–1 (pH 1–11) and −42.73 ± 0.61 mV pH–1 (pH 11–1). A series of electrochemical tests demonstrated that HF-Ti3C2Tx exhibited better analytical performances, including sensitivity, selectivity, and reversibility, owing to deep etching. The HF-Ti3C2Tx was thus further fabricated as a flexible potentiometric pH sensor by virtue of its 2D characteristic. Upon integrating with a solid-contact Ag/AgCl reference electrode, the flexible sensor realized real-time monitoring of pH level in human sweat. The result disclosed a relatively stable pH value of ~6.5 after perspiration, which was consistent with the ex situ sweat pH test. This work offers a type of MXene-based potentiometric pH sensor for wearable sweat pH monitoring.
Green Fabrication of Sustainable Porous Chitosan/Kaolin Composite Membranes Using Polyethylene Glycol as a Porogen: Membrane Morphology and Properties
Authors: Rekik Sonia Bouzid , Gassara Sana , Deratani André
Published: March 2023

One of the major challenges in membrane manufacturing today is to reduce the environmental footprint by promoting biobased raw materials and limiting the use of toxic solvents. In this context, environmentally friendly chitosan/kaolin composite membranes, prepared using phase separation in water induced by a pH gradient, have been developed. Polyethylene glycol (PEG) with a molar mass ranging from 400 to 10,000 g·mol−1 was used as a pore forming agent. The addition of PEG to the dope solution strongly modified the morphology and properties of the formed membranes. These results indicated that PEG migration induced the formation of a network of channels promoting the penetration of the non-solvent during the phase separation process, resulting in an increase in porosity and the formation of a finger-like structure surmounted by a denser structure of interconnected pores of 50–70 nm in diameter. The hydrophilicity of the membrane surface increased likely related to PEG trapping in the composite matrix. Both phenomena were more marked as the PEG polymer chain was longer, resulting in a threefold improvement in filtration properties.
Biofilm-Induced Corrosion Inhibition of Q235 Carbon Steel by Tenacibaculum mesophilum D-6 and Bacillus sp. Y-6
Authors: Ruan Xiaoxi , Yang Linlin , Wang Yan , Dong Yizhe , Xu Dake , Zhang Mingxing
Published: March 2023

The corrosion of carbon steel causes dramatic economic losses each year. Since conventional corrosion prevention approaches may cause pollution problems to the environment, ecofriendly and effective corrosion approaches are desired. Microbiologically influenced corrosion inhibition (MICI) has been reported as a sustainable corrosion prevention method. This work aims to evaluate the corrosion inhibition effect of two bacterial strains, Tenacibaculum mesophilum D-6 and Bacillus sp. Y-6 by choosing Q235 carbon steel as a model system. Scanning electron microscopy (SEM), confocal laser scanning microscopy (CLSM) and a series of electrochemical techniques were applied to study the corrosion prevention effect. The electrochemical and pitting results indicated that T. mesophilum D-6 displayed a better corrosion protection effect. T. mesophilum D-6 formed a denser and thicker biofilm on the Q235 surface than Bacillus sp. Y-6. The maximum thickness of the T. mesophilum D-6 biofilms was 11.6 ± 0.7 μm, which is about twice as thick than that of Bacillus sp. Y-6. The corrosion prevention mechanism was ascribed to the formation of biofilms as a barrier to block corrosive agents such as O2. This study provides a theoretical foundation for the application of biofilms as green and effective corrosion inhibitors for carbon steel.
Investigation of Mechanical Properties and Wear Resistance of A2/B2 Type Medium-Entropy Alloy Matrix Reinforced with Tungsten Particles by In-Situ Reaction
Authors: Wu Mingyu , Diao Guijiang , Xu Zhen , Sim Ruiken , Chen Wengang , Chen Daolun , Li Dongyang
Published: March 2023

Microstructure, mechanical properties, wear resistance, corrosion and corrosive wear resistance of AlCrFeNiWx (x = 0, 0.1, 0.2, 0.3 and 0.4) medium-entropy alloys (MEAs) prepared by vacuum arc melting process were investigated. Results of the study show that the microstructure of as-cast AlCrFeNiWx alloys is composed of one disordered Fe-Cr rich BCC phase (A2) and one ordered NiAl-rich (B2) phase when x = 0 and 0.1; W particles appear when x ≥ 0.2. Hardness and strength of AlCrFeNi alloy are markedly increased by the W addition. The strengthening mechanisms include solid-solution strengthening, nano-sized precipitation strengthening and second phase strengthening. The excellent ductility of AlCrFeNi is retained with minor W addition (x ≤ 0.2) but it considerably declines as more W is added, resulting from the precipitation of excessive large-sized W particles. W addition improves the pitting resistance and passivation property of AlCrFeNi HEA in 3.5 wt. % NaCl solution. It is shown that AlCrFeNiW0.3 possesses the highest corrosion resistance, as reflected by the highest Ecorr and the lowest Icorr. Tungsten notably enhances the resistance of this HEA to wear and corrosive wear. AlCrFeNiW0.4 with the highest strength and hardness exhibits the lowest wear volume loss under both dry and corrosive wear conditions.
Preliminary Exploration of Metabolic Mechanisms in Copper-Exposed Sepia esculenta Based on Transcriptome Analysis
Authors: Li Zan , Jiang Lisheng , Xu Tao , Bao Xiaokai , Wang Weijun , Feng Yanwei , Yang Jianmin , Ma Jingjun
Published: March 2023

As a common and high-concentration heavy metal in the ocean, Cu can induce metal toxicity and significantly affect the metabolic function of marine organisms. Sepia esculenta is an important economic cephalopod found along the east coast of China, the growth, movement, and reproduction of which are all affected by heavy metals. Hitherto, the specific metabolic mechanism of heavy-metal exposure in S. esculenta is still unclear. In this study, we identified 1131 DEGs through transcriptome analysis of larval S. esculenta within 24 h of Cu exposure. GO and KEGG functional enrichment analysis results indicated that Cu exposure may affect purine metabolism, protein digestion and absorption, cholesterol metabolism, and other metabolic processes in S. esculenta larvae. It is worth noting that in this study we explore metabolic mechanism of Cu-exposed S. esculenta larvae through the comprehensive analysis of protein–protein interaction network and KEGG enrichment analysis for the first time and find 20 identified key and hub genes such as CYP7A1, CYP3A11, and ABCA1. Based on their expression, we preliminarily speculate that Cu exposure may inhibit multiple metabolic processes and induce metabolic disorders. Our results lay a foundation for further understanding the metabolic mechanism of S. esculenta against heavy metals and provide theoretical help for S. esculenta artificial breeding.
Metabolomic-Based Studies of the Intake of Virgin Olive Oil: A Comprehensive Review
Authors: Vazquez-Aguilar Alejandra , Sanchez-Rodriguez Estefania , Rodriguez-Perez Celia , Rangel-Huerta Oscar , Mesa Maria
Published: March 2023

Virgin olive oil (VOO) is a high-value product from the Mediterranean diet. Some health and nutritional benefits have been associated with its consumption, not only because of its monounsaturated-rich triacylglycerols but also due to its minor bioactive components. The search for specific metabolites related to VOO consumption may provide valuable information to identify the specific bioactive components and to understand possible molecular and metabolic mechanisms implicated in those health effects. In this regard, metabolomics, considered a key analytical tool in nutritional studies, offers a better understanding of the regulatory functions of food components on human nutrition, well-being, and health. For that reason, the aim of the present review is to summarize the available scientific evidence related to the metabolic effects of VOO or its minor bioactive compounds in human, animal, and in vitro studies using metabolomics approaches.
Ethanolic Extract of Artemisia vulgaris Leaf Promotes Apoptotic Cell Death in Non-Small-Cell Lung Carcinoma A549 Cells through Inhibition of the Wnt Signaling Pathway
Authors: Tiwari Rohit Kumar , Ahmad Afza , Khan Ahamad Faiz , Al-Keridis Lamya Ahmed , Saeed Mohd , Alshammari Nawaf , Alabdallah Nadiyah M. , Ansari Irfan Ahmad , Mujeeb Farina
Published: March 2023

The Wnt signaling pathway is reported to be associated with lung cancer progression, metastasis and drug resistance, and thus it is an important therapeutic target for lung cancer. Plants have been shown as reservoirs of multiple potential anticancer agents. In the present investigation, the ethanolic leaf extract of Artemisia vulgaris (AvL-EtOH) was initially analyzed by means of gas chromatography-mass spectrometry (GC–MS) to identify the important phytochemical constituents. The GC–MS analysis of AvL-EtOH exhibited 48 peaks of various secondary metabolites such as terpenoids, flavonoids, carbohydrates, coumarins, amino acids, steroids, proteins, phytosterols, and diterpenes. It was found that the treatment with increasing doses of AvL-EtOH suppressed the proliferation and migration of lung cancer cells. Furthermore, AvL-EtOH induced prominent nuclear alteration along with a reduction in mitochondrial membrane potential and increased ROS (reactive oxygen species) generation in lung cancer cells. Moreover, AvL-EtOH-treated cells exhibited increased apoptosis, demonstrated by the activation of caspase cascade. AvL-EtOH also induced downregulation of Wnt3 and β-catenin expression along with cell cycle protein cyclin D1. Thus, the results of our study elucidated the potential of bioactive components of Artemisia vulgaris in the therapeutic management of lung cancer cells.
SnO2-Based NO2 Gas Sensor with Outstanding Sensing Performance at Room Temperature
Authors: Kumar Rahul , Mamta  , Kumari Raman , Singh Vidya Nand
Published: March 2023

The controlled and efficient formation of oxygen vacancies on the surface of metal oxide semiconductors is required for their use in gas sensors. This work addresses the gas-sensing behaviour of tin oxide (SnO2) nanoparticles for nitrogen oxide (NO2), NH3, CO, and H2S detection at various temperatures. Synthesis of SnO2 powder and deposition of SnO2 film is conducted using sol-gel and spin-coating methods, respectively, as these methods are cost-effective and easy to handle. The structural, morphological, and optoelectrical properties of nanocrystalline SnO2 films were studied using XRD, SEM, and UV-visible characterizations. The gas sensitivity of the film was tested by a two-probe resistivity measurement device, showing a better response for the NO2 and outstanding low-concentration detection capacity (down to 0.5 ppm). The anomalous relationship between specific surface area and gas-sensing performance indicates the SnO2 surface’s higher oxygen vacancies. The sensor depicts a high sensitivity at 2 ppm for NO2 with response and recovery times of 184 s and 432 s, respectively, at room temperature. The result demonstrates that oxygen vacancies can significantly improve the gas-sensing capability of metal oxide semiconductors.
4-Mercaptopyridine-Modified Sensor for the Sensitive Electrochemical Detection of Mercury Ions
Authors: Han Mingjie , Xie Yong , Wang Ri , Li Yang , Bian Chao , Xia Shanhong
Published: March 2023

As a highly toxic heavy metal ion, mercury ion (Hg2+) pollution has caused serious harm to the environment and human health. In this paper, 4-mercaptopyridine (4-MPY) was selected as the sensing material and decorated on the surface of a gold electrode. Trace Hg2+ could be detected by both differential pulse voltammetry (DPV) and electrochemical impedance spectroscopy (EIS) methods. The proposed sensor displayed a wide detection range from 0.01 μg/L to 500 μg/L with a low limit of detection (LOD) of 0.002 μg/L by EIS measurements. Combined with molecular simulations and electrochemical analyses, the chelating mechanism between Hg2+ and 4-MPY was explored. Through the analysis of binding energy (BE) values and stability constants, 4-MPY showed an excellent selectivity for Hg2+. In the presence of Hg2+, the coordination of Hg2+ with the pyridine nitrogen of 4-MPY was generated at the sensing region, which caused a change in the electrochemical activity of the electrode surface. Due to the strong specific binding capability, the proposed sensor featured excellent selectivity and an anti-interference capability. Furthermore, the practicality of the sensor for Hg2+ detection was validated with the samples of tap water and pond water, which demonstrated its potential application for on-site environmental detection.
Antibiotic-Resistant Desulfovibrio Produces H2S from Supplements for Animal Farming
Authors: Karnachuk Olga V. , Beletsky Alexey V. , Rakitin Andrey L. , Ikkert Olga P. , Avakyan Marat R. , Zyusman Viacheslav S. , Napilov Andrei , Mardanov Andrey V. , Ravin Nikolai V.
Published: March 2023

Sulphate-reducing bacteria, primarily Desulfovibrio, are responsible for the active generation of H2S in swine production waste. The model species for sulphate reduction studies, Desulfovibrio vulgaris strain L2, was previously isolated from swine manure characterized by high rates of dissimilatory sulphate reduction. The source of electron acceptors in low-sulphate swine waste for the high rate of H2S formation remains uncertain. Here, we demonstrate the ability of the L2 strain to use common animal farming supplements including L-lysine-sulphate, gypsum and gypsum plasterboards as electron acceptors for H2S production. Genome sequencing of strain L2 revealed the presence of two megaplasmids and predicted resistance to various antimicrobials and mercury, which was confirmed in physiological experiments. Most of antibiotic resistance genes (ARG) are carried by two class 1 integrons located on the chromosome and on the plasmid pDsulf-L2-2. These ARGs, predicted to confer resistance to beta-lactams, aminoglycosides, lincosamides, sulphonamides, chloramphenicol and tetracycline, were probably laterally acquired from various Gammaproteobacteria and Firmicutes. Resistance to mercury is likely enabled by two mer operons also located on the chromosome and on pDsulf-L2-2 and acquired via horizontal gene transfer. The second megaplasmid, pDsulf-L2-1, encoded nitrogenase, catalase and type III secretion system suggesting close contact of the strain with intestinal cells in the swine gut. The location of ARGs on mobile elements allows us to consider D. vulgaris strain L2 as a possible vector transferring antimicrobials resistance determinants between the gut microbiote and microbial communities in environmental biotopes.
Specialized Metabolites Produced by Phytotopatogen Fungi to Control Weeds and Parasite Plants
Authors: Evidente Antonio
Published: March 2023

Weeds such as parasite plants are one of the most serious pests that farmers are forced to combat since the development of agriculture using different methods including mechanic and agronomy strategies. These pests have generated significant losses of agrarian and herding production, constituting a serious impediment for agricultural activities in reforestation practices and in important infrastructures. All these serious problems have induced the expansive and massive use of synthetic herbicides, which represents one of the main cause of environmental pollution, as well as serious risks for human and animal health. An alternative environmental friendly control method could be the use of bioherbicides based on suitably bioformulated natural products, of which the main ones are fungal phytotoxins. This review covers the literature from 1980 to the present (2022) and concerns fungal phytotoxins with potential herbicidal activity in order to obtain their efficacy as bioherbicides for practical application in agriculture. Furthermore, some bioherbicides based on microbial toxic metabolites are commercially available, and their application in field, mode of action and future perspectives are also discussed.
Clostridioides difficile, a New “Superbug”
Authors: Markovska Rumyana , Dimitrov Georgi , Gergova Raina , Boyanova Lyudmila
Published: March 2023

Clostridioides difficile is a Gram-positive, spore-forming, anaerobic bacterium. The clinical features of C. difficile infections (CDIs) can vary, ranging from the asymptomatic carriage and mild self-limiting diarrhoea to severe and sometimes fatal pseudomembranous colitis. C. difficile infections (CDIs) are associated with disruption of the gut microbiota caused by antimicrobial agents. The infections are predominantly hospital-acquired, but in the last decades, the CDI patterns have changed. Their prevalence increased, and the proportion of community-acquired CDIs has also increased. This can be associated with the appearance of hypervirulent epidemic isolates of ribotype 027. The COVID-19 pandemic and the associated antibiotic overuse could additionally change the patterns of infections. Treatment of CDIs is a challenge, with only three appropriate antibiotics for use. The wide distribution of C. difficile spores in hospital environments, chronic persistence in some individuals, especially children, and the recent detection of C. difficile in domestic pets can furthermore worsen the situation. “Superbugs” are microorganisms that are both highly virulent and resistant to antibiotics. The aim of this review article is to characterise C. difficile as a new member of the “superbug” family. Due to its worldwide spread, the lack of many treatment options and the high rates of both recurrence and mortality, C. difficile has emerged as a major concern for the healthcare system.
Single-Stranded DNA-Binding Proteins Mediate DSB Repair and Effectively Improve CRISPR/Cas9 Genome Editing in Escherichia coli and Pseudomonas
Authors: Chai Ran , Zhang Qi , Wu Jie , Shi Ziwen , Li Yanan , Gao Yuqian , Qi Yuancheng , Qiu Liyou
Published: March 2023

Single-stranded DNA-binding proteins (SSBs) are essential for all living organisms. Whether SSBs can repair DNA double-strand breaks (DSBs) and improve the efficiency of CRISPR/Cas9-mediated genome editing has not been determined. Here, based on a pCas/pTargetF system, we constructed pCas-SSB and pCas-T4L by replacing the λ-Red recombinases with Escherichia coli SSB and phage T4 DNA ligase in pCas, respectively. Inactivation of the E. coli lacZ gene with homologous donor dsDNA increased the gene editing efficiency of pCas-SSB/pTargetF by 21.4% compared to pCas/pTargetF. Inactivation of the E. coli lacZ gene via NHEJ increased the gene editing efficiency of pCas-SSB/pTargetF by 33.2% compared to pCas-T4L/pTargetF. Furthermore, the gene-editing efficiency of pCas-SSB/pTargetF in E. coli (ΔrecA, ΔrecBCD, ΔSSB) with or without donor dsDNA did not differ. Additionally, pCas-SSB/pTargetF with donor dsDNA successfully deleted the wp116 gene in Pseudomonas sp. UW4. These results demonstrate that E. coli SSB repairs DSBs caused by CRISPR/Cas9 and effectively improves CRISPR/Cas9 genome editing in E. coli and Pseudomonas.
HIV/Mtb Co-Infection: From the Amplification of Disease Pathogenesis to an “Emerging Syndemic”
Authors: Azevedo-Pereira José Miguel , Pires David , Calado Marta , Mandal Manoj , Santos-Costa Quirina , Anes Elsa
Published: March 2023

Human immunodeficiency virus (HIV) and Mycobacterium tuberculosis (Mtb) are pathogens responsible for millions of new infections each year; together, they cause high morbidity and mortality worldwide. In addition, late-stage HIV infection increases the risk of developing tuberculosis (TB) by a factor of 20 in latently infected people, and even patients with controlled HIV infection on antiretroviral therapy (ART) have a fourfold increased risk of developing TB. Conversely, Mtb infection exacerbates HIV pathogenesis and increases the rate of AIDS progression. In this review, we discuss this reciprocal amplification of HIV/Mtb coinfection and how they influence each other’s pathogenesis. Elucidating the infectious cofactors that impact on pathogenesis may open doors for the design of new potential therapeutic strategies to control disease progression, especially in contexts where vaccines or the sterile clearance of pathogens are not effectively available.
Comparative Experiments on the Role of CO2 in the Gold Distribution between Pyrite and a High-Salinity Fluid
Authors: Laptev Yuri , Doroshkevich Anna , Prokopyev Ilya
Published: March 2023

Experimental studies were conducted to identify the physical and chemical features of gold’s behaviour in hydrothermal processes linked to ore formation and involving CO2 in oxidized deposits. With the aid of the autoclave method, in a temperature range of between 200 and 400 °C, the isochoric dependences of the PVT parameters of concentrated sulphate chloride fluids were plotted, both in the presence and absence of CO2. Our experiments established that concentrated sulphate–chloride fluids (22 wt % Na2SO4 + 2.2 wt % NaCl) that lack CO2 are characterized by a wide supercritical temperature range, with homogenization temperatures of between 250 and 325 °C. In the presence of CO2, the same type of fluids showed heterogenization at a molar fraction of XCO2 = 0.18 (t = 192 °C, P = 176 bar). The process of homogenization for these low-density and high-salinity fluids was impossible at temperatures between 375 and 400 °C and at pressures between 600 and 700 bar. The behaviour of gold was studied during its interaction with a basic composition fluid of sulphate–chloride. We applied the autoclave method under the conditions of a simultaneous synthesis of pyrite and gold dissolution (metallic Au), at a temperature of 340 °C and at a pressure of 440 bar. High Au concentrations (up to 4410 ppm of Au in CO2-bearing fluids) were attained at high gold solubilities (up to 13.5 ppm in the presence of CO2), owing to the process of Au reprecipitation within the pyrite phase. We did not detect Au in the pyrite when we used the XRD or SEM methods, which suggested that it might be present as invisible gold. High values of the distribution coefficient (KD = CAu(solid)/CAu(solution)) in the fluids lacking (KD = 62) and bearing CO2 (KD = 327) empirically confirmed the possibility that gold concentrates in pyrite in structurally non-binding forms.
Study of Structural Transformation and Chemical Reactivity of Kaolinite-Based High Ash Slime during Calcination
Authors: Xue Hongfei , Dong Xianshu , Fan Yuping , Ma Xiaomin , Yao Suling
Published: March 2023

The transformation of kaolinite into metakaolinite by thermal activation to obtain highly active aluminosilicate is commonly known. In addition to kaolin, the high content of kaolinite in coal mining waste is another potential source for obtaining an aluminosilicate precursor, thereby protecting the environment and adding value to industrial wastes. In this paper, the kaolinite-based high ash slime (KAS) was calcined at temperatures ranging from 400 °C to 1000 °C under air, N2, and CO2 atmospheres, respectively. The thermal behaviors and structural evolution of each component in KAS were analyzed by thermal analysis (TG-DSC), X-ray diffraction (XRD), Fourier transform infrared spectroscopy (FTIR), and X-ray photoelectron spectroscopy (XPS). Moreover, the chemical reactivity of Al2O3 and SiO2 in calcined KAS was evaluated by HCl and NaOH leaching methods. The results show that the applied KAS in this study primarily consisted of kaolinite and carbon, while the minor mineral phases included quartz, calcite, and pyrite. Additionally, the structural transformation of kaolinite during calcination included dehydroxylation, sintering, and the formation of mullite. Crystalline kaolinite completely decomposed into semicrystalline metakaolinite at 600–800 °C, accounting for the increase in chemical reactivity. The interlayer sintering of metakaolinite and the recrystallization of amorphous components led to the decrease in chemical reactivity after 800 °C. Furthermore, the thermal behaviors of carbon in KAS are greatly affected by the calcination atmosphere. The presence of carbon reduced the chemical reactivity of calcined KAS.
Contraints on Petrogenesis and Fe Fertility of Intrusive Complexes in the Han–Xing Region, North China Craton from Apatite Geochemistry
Authors: Liang Xian , Wang Fangyue , Zhang Juquan , Zhang Long , Zhang Junwu , Wang Jingui
Published: March 2023

The Han–Xing (Handan–Xingtai) region is famous for its endowment of skarn iron deposits in China. These deposits are mainly spatially and genetically associated with diorite rocks, but these rocks show different Fe ore potential. Major and trace elements composition of apatite from the Kuangshan and Fushan diorite complexes were investigated to explore the potential of apatite as a proxy of petrogenesis and Fe fertility of these rocks. All the investigated apatite grains are identified as fluorapatite, which is typical for magmatic apatite. The Sr, Y, Mn, and Heavy Rare Earth Elements (HREE) contents of apatite in the Kuangshan diorite complex are positively correlated with the increase of melt SiO2 content compared to that in the Fushan diorite complex. Apatite geochemistry indicates that magmas of the Fushan complex mainly experienced the fractional crystallization of hornblende in the deep crustal reservoirs, whereas the Kuangshan complex has experienced the fractional crystallization of hornblende in the deep and the shallow plagioclase fractional crystallization. The F, Cl and S content of the Kuangshan complex estimated by apatite volatile (F = 2632 ppm, Cl = 4100 ppm, SO3 = 140 ppm) is significantly higher than that of the Fushan complex (F = 2488 ppm, Cl = 3400 ppm, SO3 = 90 ppm). The Eu, Ce anomalies, Mn, and SO3 contents of apatite show that both of the two complexes have higher oxygen fugacity (Δ FMQ), but the oxygen fugacity of the Kuangshan complex calculated by Mn and SO3 content (Δ FMQ + 2.41) is higher than that of the Fushan complex (Δ FMQ + 1.77), which may also be one of the reasons for the great difference in ore-forming scale between the two complexes. Our results suggest that the high volatile contents and oxidation states of magma estimated by apatite, as well as the lower Sr/Y in apatite reflect favorable conditions for skarn iron mineralization. Therefore, our study shows that magmatic apatite geochemistry may be a useful tool to distinguish the Fe fertility of plutonic rocks related to skarn deposits.
Application of Non-Destructive Test Results to Estimate Rock Mechanical Characteristics—A Case Study
Authors: Fang Zhichun , Qajar Jafar , Safari Kosar , Hosseini Saeedeh , Khajehzadeh Mohammad , Nehdi Moncef L.
Published: March 2023

Accurately determining rock elastic modulus (EM) and uniaxial compressive strength (UCS) using laboratory methods requires considerable time and cost. Hence, the development of models for estimating the mechanical properties of rock is a very attractive alternative. The current research was conducted to predict the UCS and EM of sandstone rocks using quartz%, feldspar%, fragments%, compressional wave velocity (PW), the Schmidt hardness number (SN), porosity, density, and water absorption via simple regression, multivariate regression (MVR), K-nearest neighbor (KNN), support vector regression (SVR) with a radial basis function, the adaptive neuro-fuzzy inference system (ANFIS) using the Gaussian membership (GM) function, and the back-propagation neural network (BPNN) based on various training algorithms. The samples were categorized as litharenite and feldspathic litharenite. By increasing the feldspar% and quartz% and decreasing the fragments%, the static properties increased. The results of the statistical analysis showed that the SN and porosity have the greatest effect on the UCS and EM, respectively. Among the Levenberg–Marquardt (LM), Bayesian regularization, and Scaled Conjugate Gradient training algorithms using the BPNN method, the LM achieved the best results in forecasting the UCS and EM. The ideal obtained BPNN, using a trial-and-error process, contains four neurons in a hidden layer with eight inputs. All five models attained acceptable accuracy (correlation coefficient greater than 70%) for estimating the static properties. By comparing the methods, the ANFIS showed higher precision than the other methods. The UCS and EM of the samples can be determined with very high accuracy (R2 > 99%).
Environmental Impacts of Gold Mining—With Special Reference to South Africa
Authors: Laker Michiel C.
Published: March 2023

Gold mining has serious negative environmental impacts, especially due to pollution emanating from tailings storage facilities (TSFs, tailings dams, slimes dams). The most important forms of pollution from TSFs are acid mine drainage (AMD) and high levels of potentially toxic elements (PTEs). AMD arises from the high levels of pyrite in the mining ores, which become oxidised in the TSFs where the pyrite is exposed to atmospheric oxygen. The sulphate produced from oxidation of the sulphide in the pyrite dissolves in water to form sulphuric acid, a very strong acid. pH levels in the extremely low range of 3–4 are common. At such low pH the mobilities of numerous metallic PTEs present in gold mine tailings become extremely high, causing them to move into the environment in AMD. AMD acidifies soils to very low pH levels at which the mobility and plant-availability of metallic PTEs are very high, causing toxicities. Very disconcerting is that AMD and PTE pollution is in some cases continueing unabated at high rates even more than 70 years after a mine has been abandoned. Rehabilitation of TSFs to contain AMD and PTEs within them is very expensive and there seems to be reluctance to fully commit to their rehabilitation. Rehabilitation of TSFs is also extremely difficult. There does not yet seem to be any guidelines for their effective rehabilitation.
Evaluation of Inhibitory Effect and Mechanism of Euphorbia Factor L3 against Phytophthora capsici
Authors: Wang Bi , Zhang Guodong , Yang Jingjing , Li Linwei , Li Pirui , Xu Shu , Feng Xu , Chen Yu
Published: March 2023

Phytophthora capsici is a highly destructive phytopathogenic oomycete with a broad host range and is responsible for tremendous losses. Euphorbia factor L3 (EFL3) is a natural plant-derived compound that has been widely studied in medicine and cosmetic applications. In this study, the sensitivity of 105 P. capsici isolates to EFL3 was determined, and the biological activity and physiological effects of EFL3 against P. capsici were investigated. The median effective concentration (EC50) values for EFL3 inhibition mycelial growth and spore germination ranged from 0.66 to 8.94 μg/mL (mean, 2.96 ± 0.91 μg/mL) and 1.63 to 13.16 μg/mL (mean, 5.30 ± 1.64 μg/mL), respectively. EFL3 treatment resulted in cell wall and cell membrane damage of P. capsici, which was revealed by morphological and ultrastructural observations, propidium iodide (PI) and calcofluor white (CFW) staining, and measurements of relative conductivity as well as malondialdehyde (MDA) and glycerol contents. In addition, the contents of phospholipid and cellulose, which are the major components of cell membrane and cell wall, were significantly reduced following EFL3 treatment. Furthermore, EFL3 provided protective as well as curative efficacies against P. capsici on detached tomato leaves and pepper seedlings in vivo. These data show that EFL3 exhibits strong inhibitory activity against P. capsici, thereby suggesting that it could be an effective alternative for controlling P. capsici-induced diseases.
Infrared Photodetection from 2D/3D van der Waals Heterostructures
Authors: Tang Qianying , Zhong Fang , Li Qing , Weng Jialu , Li Junzhe , Lu Hangyu , Wu Haitao , Liu Shuning , Wang Jiacheng , Deng Ke , Xiao Yunlong , Wang Zhen , He Ting
Published: March 2023

An infrared photodetector is a critical component that detects, identifies, and tracks complex targets in a detection system. Infrared photodetectors based on 3D bulk materials are widely applied in national defense, military, communications, and astronomy fields. The complex application environment requires higher performance and multi-dimensional capability. The emergence of 2D materials has brought new possibilities to develop next-generation infrared detectors. However, the inherent thickness limitations and the immature preparation of 2D materials still lead to low quantum efficiency and slow response speeds. This review summarizes 2D/3D hybrid van der Waals heterojunctions for infrared photodetection. First, the physical properties of 2D and 3D materials related to detection capability, including thickness, band gap, absorption band, quantum efficiency, and carrier mobility, are summarized. Then, the primary research progress of 2D/3D infrared detectors is reviewed from performance improvement (broadband, high-responsivity, fast response) and new functional devices (two-color detectors, polarization detectors). Importantly, combining low-doped 3D and flexible 2D materials can effectively improve the responsivity and detection speed due to a significant depletion region width. Furthermore, combining the anisotropic 2D lattice structure and high absorbance of 3D materials provides a new strategy in high-performance polarization detectors. This paper offers prospects for developing 2D/3D high-performance infrared detection technology.
Challenges to Safe Nanomedicine Treatment
Authors: Yang Chunhua , Merlin Didier
Published: March 2023

Nanotechnology has the potential to revolutionize the field of drug treatment by enabling the targeted delivery and controlled release of drugs at a cellular level [...]
Variations in Biodistribution and Acute Response of Differently Shaped Titania Nanoparticles in Healthy Rodents
Authors: Violatto Martina B. , Sitia Giovanni , Talamini Laura , Morelli Annalisa , Tran Ngoc Lan , Zhang Qian , Masood Atif , Pelaz Beatriz , Chakraborty Indranath , Cui Daxiang , Parak Wolfgang J. , Salmona Mario , Bastús Neus G. , Puntes Victor , Bigini Paolo
Published: March 2023

Titanium dioxide nanoparticles (TiO2 NPs) are one of the main sources of the nanoparticulate matter exposure to humans. Although several studies have demonstrated their potential toxic effects, the real nature of the correlation between NP properties and their interaction with biological targets is still far from being fully elucidated. Here, engineered TiO2 NPs with various geometries (bipyramids, plates, and rods) have been prepared, characterized and intravenously administered in healthy mice. Parameters such as biodistribution, accumulation, and toxicity have been assessed in the lungs and liver. Our data show that the organ accumulation of TiO2 NPs, measured by ICP-MS, is quite low, and this is only partially and transiently affected by the NP geometries. The long-lasting permanence is exclusively restricted to the lungs. Here, bipyramids and plates show a higher accumulation, and interestingly, rod-shaped NPs are the most toxic, leading to histopathological pulmonary alterations. In addition, they are also able to induce a transient increase in serum markers related to hepatocellular injury. These results indicate that rods, more than bipyramidal and spherical geometries, lead to a stronger and more severe biological effect. Overall, small physico-chemical differences can dramatically modify both accumulation and safety.
Enhanced Diffractive Circular Dichroism from Stereoscopic Plasmonic Molecule Array
Authors: Gu Liangliang , Shu Rong , Liu Xiangfeng , Hu Haifeng , Zhan Qiwen
Published: March 2023

Artificial nanostructures with large optical chiral responses have been intensively investigated recently. In this work, we propose a diffractive circular dichroism enhancement technique using stereoscopic plasmonic molecule structures. According to the multipole expansion analysis, the z-component of the electric dipole becomes the dominant chiral scattering mechanism during the interaction between an individual plasmonic molecule and the plane wave at a grazing angle. For a periodical structure with the designed plasmonic molecule, large diffractive circular dichroism can be obtained, which can be associated with the Wood–Rayleigh anomaly. Such a diffractive circular dichroism enhancement is verified by the good agreement between numerical simulations and experimental results. The proposed approach can be potentially used to develop enhanced spectroscopy techniques to measure chiral information, which is very important for fundamental physical and chemical research and bio-sensing applications.