bluuebunny/crossref_metadata_2025 huggingface dataset:
Combined full-length transcriptomic and metabolomic analysis reveals the regulatory mechanisms of adaptation to salt stress in asparagus
Authors: Zhang Xuhong , Han Changzhi , Liang Yuqin , Yang Yang , Liu Yun , Cao Yanpo
Published: October 2022

Soil salinity is a very serious abiotic stressor that affects plant growth and threatens crop yield. Thus, it is important to explore the mechanisms of salt tolerance of plant and then to stabilize and improve crop yield. Asparagus is an important cash crop, but its salt tolerance mechanisms are largely unknown. Full-length transcriptomic and metabolomic analyses were performed on two asparagus genotypes: ‘jx1502’ (a salt-tolerant genotype) and ‘gold crown’ (a salt-sensitive genotype). Compared with the distilled water treatment (control), 877 and 1610 differentially expressed genes (DEGs) were identified in ‘jx1502’ and ‘gold crown’ under salt stress treatment, respectively, and 135 and 73 differentially accumulated metabolites (DAMs) were identified in ‘jx1502’ and ‘gold crown’ under salt stress treatment, respectively. DEGs related to ion transport, plant hormone response, and cell division and growth presented differential expression profiles between ‘jx1502’ and ‘gold crown.’ In ‘jx1502,’ 11 ion transport-related DEGs, 8 plant hormone response-related DEGs, and 12 cell division and growth-related DEGs were upregulated, while 7 ion transport-related DEGs, 4 plant hormone response-related DEGs, and 2 cell division and growth-related DEGs were downregulated. Interestingly, in ‘gold crown,’ 14 ion transport-related DEGs, 2 plant hormone response-related DEGs, and 6 cell division and growth-related DEGs were upregulated, while 45 ion transport-related DEGs, 13 plant hormone response-related DEGs, and 16 cell division and growth-related DEGs were downregulated. Genotype ‘jx1502’ can modulate K+/Na+ and water homeostasis and maintain a more constant transport system for nutrient uptake and distribution than ‘gold crown’ under salt stress. Genotype ‘jx1502’ strengthened the response to auxin (IAA), as well as cell division and growth for root remodeling and thus salt tolerance. Therefore, the integration analysis of transcriptomic and metabolomic indicated that ‘jx1502’ enhanced sugar and amino acid metabolism for energy supply and osmotic regulatory substance accumulation to meet the demands of protective mechanisms against salt stress. This work contributed to reveal the underlying salt tolerance mechanism of asparagus at transcription and metabolism level and proposed new directions for asparagus variety improvement.
Phylogeographic structure of Heteroplexis (Asteraceae), an endangered endemic genus in the limestone karst regions of southern China
Authors: Zhu Xianliang , Liang Hui , Jiang Haolong , Kang Ming , Wei Xiao , Deng Lili , Shi Yancai
Published: October 2022

Though the karst regions in south and southwest China are plant diversity hotspots, our understanding of the phylogeography and evolutionary history of the plants there remains limited. The genus Heteroplexis (Asteraceae) is one of the typical representative plants isolated by karst habitat islands, and is also an endangered and endemic plant to China. In this study, species-level phylogeographic analysis of the genus Heteroplexis was conducted using restriction site-associated DNA sequencing (RADseq). The genetic structure showed a clear phylogeographic structure consistent with the current species boundaries in the H. microcephala, H. incana, H. vernonioides, H. sericophylla, and H. impressinervia. The significant global (R = 0.37, P < 0.01) and regional (R = 0.650.95, P < 0.05) isolation by distance (IBD) signals among species indicate strong geographic isolation in the karst mountains, which may result in chronically restricted gene flow and increased genetic drift and differentiation. Furthermore, the phylogeographic structure of Heteroplexis suggested a southward migration since the last glacial period. Demographic analysis revealed the karst mountains as a refuge for Heteroplexis species. Finally, both Treemix and ABBA-BABA statistic detected significant historical gene flow between species. Significant historical gene flow and long-term stability of effective population size (Ne) together explain the high genome-wide genetic diversity among species (π = 0.05370.0838). However, the recent collapse of Ne, widespread inbreeding within populations, and restricted contemporary gene flow suggest that Heteroplexis species are probably facing a high risk of genetic diversity loss. Our results help to understand the evolutionary history of karst plants and guide conservation.
Evaluation of the Effects of Returning Apple Shoots In Situ on Soil Quality in an Apple Orchard
Authors: Zhou Enda , Lyu Sansan , Du Guodong , Lyu Deguo
Published: October 2022

Fruit tree shoots are potential useful resources that are rich in carbohydrates and inorganic nutrients but that are not typically utilized in sustainable agriculture. Our objective was to evaluate the soil properties and soil quality of an orchard after returning apple shoots in situ and to investigate the contribution rate of apple shoots as an exogenous source of organic carbon for fertility amendment of the apple root domain. One-year-old apple shoots were pruned in spring before budding, chopped into 10 cm sections and placed on the soil surface. Soil samples were collected in the first year and third year after returning the shoots. Principal component analysis, Pearson correlation analysis and soil quality index (SQI) comprehensive analysis methods, combined with fuzzy mathematics, were adopted to evaluate the effects of returning apple shoots on comprehensive soil quality, including the soil fertility indicators, soil exchangeable cations, soil neutral sugar and amino acids. Increases in soil organic carbon (SOC), available potassium (K), and available phosphorus (P) were observed in different layers of the orchard soil with returned shoots over time. The total nitrogen (N) content decreased by 18.75% and 13.79% in the 0–20 cm and 20–40 cm soil layers, respectively, in the first year, but increased significantly in the third year. Significant increases in exchangeable cations (Na+, Ca2+, Mg2+) in the 0–20 cm soil layer were also observed in the third year after returning shoots, compared to the control. In addition, obvious accumulation of glucose and xylose was observed in the 0–20 cm soil layer compared to the controls in the third year after returning shoots. The total water-soluble free amino acid contents in the third year after returning shoots were 1.08- and 1.16-times higher, respectively, than those of the controls in the 0–20 cm and 20–40 cm soil layers. The SQI in the third year was higher than that of the other treatments in the 0–20 cm soil layer. This study suggests that abandoned apple shoots used as a supplementary carbon source for orchards enhanced the soil fertility of different soil layers, regulated the soil micro environment, and improved the overall soil quality.
Tradescantia pallida (Commelinaceae) Promotes Reductions in Plutella xylostella (Lepidoptera: Plutellidae) Populations
Authors: Rocha Aline do Nascimento , Souza Silvana Aparecida de , Fioratti Claudemir Antonio Garcia , Mauad Juliana Rosa Carrijo , Mauad Munir , Mussury Rosilda Mara
Published: October 2022

The feeding activity of Plutella xylostella in brassica crops can lead to large losses; thus, pesticides that prevent feeding during the larval stage or prevent the metamorphosis of this insect can be used for its control. In this study, the effects of two types of aqueous extracts of Tradescantia pallida on the different life stage of P. xylostella cycle were tested; neither of the two aqueous extracts, which were obtained by infusion and maceration, had been tested against P. xylostella. The biological variables evaluated were larval and pupal duration and viability, pupal weight, sex ratio, longevity of females, fecundity, fertility and oviposition period. There was no significant difference in the duration of the larval phase of P. xylostella between the bioassay treatments; however, larval viability was lower when the individuals were exposed to both types of T. pallida extracts. Reduced pupal viability was observed among the individuals treated with the application of the extracts. Treatment with the aqueous extract obtained by infusion caused the lowest pupal weight, fecundity, and fertility and longevity among females. The results obtained in this study allow us to propose the bioextract as an alternative for pest management, emphasizing the technique for small producers and/or organic.
Pb4CL2 Inducing Lignin Accumulation in Superficial Scald ‘Chili’ (Pyrus bretschneideri) Pear Fruit
Authors: Li Qian , Cheng Chenxia , Zhang Chunjian , Xue Junxiu , Zhang Yong , Wang Caihong , Dang Ruihong , Yang Shaolan
Published: October 2022

Superficial scald of pear fruit is a physiological disorder that easily occurs during cold storage and seriously affects pear eating quality and commodity value. It is important to study the mechanism of superficial scald disorder. Our previous study reported that the incidence of superficial scald of calcium chloride (CaCl2)-treated pear fruit during storage was significantly lower than that of untreated fruit. In this study, we found that the accumulation of lignin in CaCl2-treated fruit was significantly lower than that of untreated fruit. The expression of the Pb4CL2 gene in the lignin synthesis pathway was downregulated in the CaCl2-treated fruit. The lignification level of the fruit overexpressing Pb4CL2 was significantly higher than that of the empty vector fruit. Therefore, we speculate that downregulation of Pb4CL2 after CaCl2 treatment plays an important role in CaCl2 inhibiting superficial scald disorder by affecting lignin accumulation in pear fruit.
Genome Analysis of the G6P6 Genotype of Porcine Group C Rotavirus in China
Authors: Jiao Ruixue , Ji Zhaoyang , Zhu Xiaoyuan , Shi Hongyan , Chen Jianfei , Shi Da , Liu Jianbo , Jing Zhaoyang , Zhang Jiyu , Zhang Liaoyuan , Feng Shufeng , Zhang Xin , Feng Li
Published: October 2022

Swine enteric disease is the predominant cause of morbidity and mortality, and viral species involved in swine enteric disease include rotaviruses and coronaviruses, among others. Awareness of the circulating porcine rotavirus group C (PoRVC) in pig herds is critical to evaluate the potential impact of infection. At present, due to the lack of disease awareness and molecular diagnostic means, the research on RVC infection in China is not well-studied. In this study, diarrhea samples collected from pig farms were detected positive for RVC by PCR, and the full-length RVC was not previously reported for Chinese pig farms. This rotavirus strain was designated as RVC/Pig/CHN/JS02/2018/G6P6. A natural recombination event was observed with breakpoints at nucleotides (nt) 2509 to 2748 of the VP2 gene. Phylogenetic analysis based on nsp1 revealed that a new branch A10 formed. Collectively, our data suggest a potentially novel gene recombination event of RVC in the VP2 gene. These findings provide a new insight into the evolution of the rotavirus.
Persistent Postural Perceptual Dizziness in Episodic Vestibular Disorders
Authors: Gambacorta Valeria , D’Orazio Alessandra , Pugliese Vincenzo , Di Giovanni Alfredo , Ricci Giampietro , Faralli Mario
Published: October 2022

Benign Paroxysmal Positional Vertigo (BPPV), Vestibular Migraine (VM), and Meniere Disease (MD) are among the most common episodic vestibulopathies. Persistent Postural Perceptual Dizziness (PPPD) is a chronic functional vestibular disorder that can arise in patients suffering from one or more of these conditions. We analyzed the role of these vestibular disorders as single or multiple associated comorbidities and as a precipitating condition for PPPD. A total of 376 patients suffering from dizziness with a known history of single or multiple vestibular disorders were preliminarily evaluated. We conducted a careful anamnesis to determine whether the reported dizziness could meet the diagnostic criteria for PPPD. PPPD was diagnosed in 24 cases; its incidence in patients with history of a single comorbidity or multiple vestibular comorbidities was 3.9% and 22.4%, respectively. BPPV, VM, and MD were identified as a precipitating condition in 2.34%, 16.45%, and 3.92%, respectively. BPPV constituted a precipitating condition mainly at the first episode. We observed that the presence of multiple vestibular comorbidities (BPPV, VM, and MD) in patients’ clinical history increased the risk of PPPD. VM plays a significant role in representing a precipitating condition for PPPD, both when present individually or in association with the other vestibular disorders.
IGFBP1hiWNT3Alo Subtype in Esophageal Cancer Predicts Response and Prolonged Survival with PD-(L)1 Inhibitor
Authors: Liu Meichen , Yan Wanpu , Chen Dongbo , Luo Jiancheng , Dai Liang , Chen Hongsong , Chen Ke-Neng
Published: October 2022

PD-(L)1 inhibitor could improve the survival of locally advanced esophageal cancer (ESCA) patients, but we cannot tailor the treatment to common biomarkers. WNT signaling activation was associated with primary resistance to immunotherapy. In this study, we used our two clinical cohorts (BJCH n = 95, BJIM n = 21) and three public cohorts to evaluate and verify a new immunotherapeutic biomarker based on WNT signaling in ESCA patients. Our findings showed that WNT signaling-related genes stratified TCGA patients into Cluster 1, 2, and 3, among which, Cluster 3 had the worst prognosis. The most up- and down-regulated genes in Cluster 3 were IGFBP1 and WNT3A. Further analysis validated that IGFBP1hiWNT3Alo ESCA patients had significantly poor RFS and OS in the TCGA and BJCH cohorts. Interestingly, IGFBP1hiWNT3Alo patients had a good response and prognosis with immunotherapy in three independent cohorts, exhibiting better predictive value than PD-L1 expression (signature AUC = 0.750; PD-L1 AUC = 0.571). Moreover, IGFBP1hiWNT3Alo patients may benefit more from immunotherapy than standard treatment (p = 0.026). Immune cell infiltration analysis revealed a significant increase in DC infiltration in IGFBP1hiWNT3Alo patients post-immunotherapy (p = 0.022), which may enhance immune response. The IGFBP1hiWNT3Alo signature could predict patients who benefited from PD-(L)1 inhibitor treatment and may serve as a biomarker in ESCA.
Myxovirus resistance (Mx) Gene Diversity in Avian Influenza Virus Infections
Authors: Alam Jahangir , Rahman Md. Mostafizer , Halder Joyanta , Islam Md. Rezuanul , Sarkar Nandini , Jabeen Ishrat , Hossain Mridha Md. Kamal , Rubaya Rubaya , Alim Md. Abdul , Bhuyan Anjuman Ara , Jahan Nusrat , Rahman Md. Masudur , Ashour Hossam M.
Published: October 2022

Avian influenza viruses (AIVs) pose threats to animal and human health. Outbreaks from the highly pathogenic avian influenza virus (HPAIV) in indigenous chickens in Bangladesh are infrequent. This could be attributed to the Myxovirus resistance (Mx) gene. To determine the impact of Mx gene diversity on AIV infections in chicken, we assessed the Mx genes, AIVs, and anti-AIV antibodies. DNA from blood cells, serum, and cloacal swab samples was isolated from non-vaccinated indigenous chickens and vaccinated commercial chickens. Possible relationships were assessed using the general linear model (GLM) procedure. Three genotypes of the Mx gene were detected (the resistant AA type, the sensitive GG type, and the heterozygous AG type). The AA genotype (0.48) was more prevalent than the GG (0.19) and the AG (0.33) genotypes. The AA genotype was more prevalent in indigenous than in commercial chickens. A total of 17 hemagglutinating viruses were isolated from the 512 swab samples. AIVs were detected in two samples (2/512; 0.39%) and subtyped as H1N1, whereas Newcastle disease virus (NDV) was detected in the remaining samples. The viral infections did not lead to apparent symptoms. Anti-AIV antibodies were detected in 44.92% of the samples with levels ranging from 27.37% to 67.65% in indigenous chickens and from 26% to 87.5% in commercial chickens. The anti-AIV antibody was detected in 40.16%, 65.98%, and 39.77% of chickens with resistant, sensitive, and heterozygous genotypes, respectively. The genotypes showed significant association (p < 0.001) with the anti-AIV antibodies. The low AIV isolation rates and high antibody prevalence rates could indicate seroconversion resulting from exposure to the virus as it circulates. Results indicate that the resistant genotype of the Mx gene might not offer anti-AIV protection for chickens.
Family Relationships in Selective Mutism—A Comparison Group Study of Children and Adolescents
Authors: Melfsen Siebke , Jans Thomas , Romanos Marcel , Walitza Susanne
Published: October 2022

Selective mutism (SM) mostly develops early in childhood and this has led to interest into whether there could be differences in relationships in families with SM compared to a control group without SM. Currently, there are merely few empirical studies examining family relationships in SM. A sample of 28 children and adolescents with SM was compared to 33 controls without SM. The groups were investigated using self-report questionnaires (Selective Mutism Questionnaire, Child-Parent Relationship Test—Child Version) for the assessment of SM and family relationships. Children with SM did not report a significantly different relationship to their mothers compared with the control group without SM. However, the scores in respect to the relationship to their fathers were significantly lower in cohesion, identification and autonomy compared with children without SM. Relationships in families with SM should be considered more in therapy.
The Moderating Role of Emotional Regulation on the Relationship between School Results and Personal Characteristics of Pupils with Attention Deficit/Hyperactivity Disorder
Authors: Linca Florentina Ionela , Budisteanu Magdalena , Popovici Doru Vlad , Cucu Natalia
Published: October 2022

This study aimed to explore the possible moderating role of emotional regulation in the relationship between problem-solving ability, visuomotor precision and visuospatial integration on the one hand and school results on the other in pupils with ADHD. A total of 241 pupils with ADHD (study group) and 207 children without ADHD (control group) were included in our research. Specific tests for the evaluation of the problem-solving ability, visuomotor precision, visuospatial integration, and emotional regulation were applied. The results showed that emotional regulation is a significant moderator of the relationship between school results and problem-solving ability, visuomotor precision, visuospatial integration, and working memory. There are statistically significant differences depending on emotional regulation, visuomotor precision, visuospatial integration, problem-solving ability and working memory in terms of school results of students with ADHD compared to children without this diagnosis. These results can be used in the development of intervention programs.
Study of the Structural, Optical and Strength Properties of Glass-like (1−x)ZnO–0.25Al2O3–0.25WO3–xBi2O3 Ceramics
Authors: Kozlovskiy Artem L. , Seitbayev Aibek S. , Borgekov Daryn B. , Zdorovets Maxim V.
Published: October 2022

The main purpose of this work is to study the effect of substitution of zinc oxide for bismuth oxide in the composition of (1−x)ZnO–0.25Al2O3–0.25WO3–xBi2O3 ceramics, as well as the accompanying processes of phase transformations and their influence on the optical and strength properties of ceramics. The use of these oxide compounds as materials for creating shielding coatings or ceramics is due to the combination of their structural, optical, and strength properties, which make it possible to compete with traditional protective glasses based on rare earth oxide compounds. Interest in these types of ceramics is due to their potential for use as basic materials for shielding ionizing radiation as well as for use as radiation-resistant coatings. The main research methods were X-ray diffractometry to determine the phase composition of ceramics; scanning electron microscopy and energy dispersive analysis to determine the morphological features and isotropy of the distribution of elements in the structure; and UV-V is spectroscopy to determine the optical properties of ceramics. During the studies, it was found that an increase in the Bi2O3 concentration leads to the formation of new phase inclusions in the form of orthorhombic Bi2WO6 and Bi2W2O9 phases, the appearance of which leads to an increase in the density of ceramics and a change in the dislocation density. An analysis of the strength properties, in particular, hardness and crack resistance, showed that a change in the phase composition of ceramics with an increase in the Bi2O3 concentration leads to a significant strengthening of the ceramics, which is due to the effect of the presence of interfacial boundaries as well as an increase in the dislocation density.
Oxidation Behavior of FeCoNiCrMo High-Entropy Coatings by Atmospheric Plasma Spraying on Zircaloy-4 in Steam at 1100 °C
Authors: Wen Lei , Li Qing , Yang Bixiao , Yang Zhennan , Wang Jianrui , Song Peng
Published: October 2022

As a potential accident-tolerant fuel cladding material, we studied the method of preparing FeCoNiCrMo coatings on zircaloy-4 substrates by atmospheric plasma spraying (APS) technology to explore the high-temperature oxidation behavior of the FeCoNiCrMo coatings at 1100 °C in high-temperature steam. Various surface analysis techniques such as X-ray diffraction, electron probe microanalysis, and scanning electron microscopy were used to analyze the phase composition and microstructure of the oxidized products. The oxidation behavior of the FeCoNiCrMo coatings and the diffusion of the FeCoNiCrMo coatings to the zircaloy-4 substrates were analyzed. After oxidation at 1100 °C, a dense Cr2O3 oxide layer was formed on the coating’s surface, which grew from 1.5 to 3 μm after 15 to 60 min of oxidation, and the FeCoNiCrMo coatings and the substrates diffused simultaneously. The oxidation tests showed that the FeCoNiCrMo coatings prepared by APS can effectively delay the oxidation of zircaloy-4 substrates.
Exploring Urinary Extracellular Vesicles and Immune Mediators as Biomarkers of Kidney Injury in COVID-19 Hospitalized Patients
Authors: Medeiros Thalia , Alves Lilian Santos , Cabral-Castro Mauro Jorge , Silva Alice Ramos Oliveira , Xavier Analúcia Rampazzo , Burger Dylan , Almeida Jorge Reis , Silva Andrea Alice
Published: October 2022

Kidney injury is an important outcome associated with COVID-19 severity. In this regard, alterations in urinary extracellular vesicles (uEVs) could be detected in the early phases of renal injury and may be reflective of the inflammatory process. This is an observational study performed with a case series of COVID-19 hospitalized patients presenting mild-to-critical disease. Total and podocyte-derived uEVs were identified by nanoscale flow cytometry, and urinary immune mediators were assessed by a multiplex assay. We studied 36 patients, where 24 (66.7%) were considered as mild/moderate and 12 (33.3%) as severe/critical. Increased levels of total uEVs were observed (p = 0.0001). Importantly, total uEVs were significantly higher in severe/critical patients who underwent hemodialysis (p = 0.03) and were able to predict this clinical outcome (AUC 0.93, p = 0.02). Severe/critical patients also presented elevated urinary levels (p < 0.05) of IL-1β, IL-4, IL-6, IL-7, IL-16, IL-17A, LIF, CCL-2, CCL-3, CCL-11, CXCL-10, FGFb, M-CSF, and CTAcK. Lastly, we observed that total uEVs were associated with urinary immune mediators. In conclusion, our results show that early alterations in urinary EVs could identify patients at higher risk of developing renal dysfunction in COVID-19. This could also be relevant in different scenarios of systemic and/or infectious disease.
Dendrochemistry in Public Health: A Case Study in North Carolina, USA
Authors: Sheppard Paul R. , Witten Mark L.
Published: October 2022

Dendrochemistry, the measurement of element concentrations in tree rings for the purpose of assessing temporal changes in chemical environments, was used to study an area in south-central North Carolina, USA, that has experienced higher than expected incidences of a couple human illnesses. A principal objective of applying dendrochemistry around an area with public health problems is to assess the environmental chemistry through time to see if the environmental abundance of any elements has changed recently, which then might inform further research into the possible linkage between those elements and the reported illnesses. Loblolly pine is common in the study area and, therefore, was chosen for sampling. Using acid digestion ICP-MS, decadal chunks of rings were measured for the concentration of multiple elements. Most of the elements measured do not show any particular changes in concentration throughout the time period covered by the trees, but four elements (molybdenum, chromium, iron, and, possibly, vanadium) show concentrations in the most recent decade (the 2010s) that were higher than for previous decades. Because this study was ecologic in design, it is not possible to associate these elements with the illnesses that are being reported for the area based on this study alone, but further environmental monitoring might be merited to confirm the temporal pattern found here.
Authenticity and Typicity of Traditional Cheeses: A Review on Geographical Origin Authentication Methods
Authors: Cardin Marco , Cardazzo Barbara , Mounier Jérôme , Novelli Enrico , Coton Monika , Coton Emmanuel
Published: October 2022

Food fraud, corresponding to any intentional action to deceive purchasers and gain an undue economical advantage, is estimated to result in a 10 to 65 billion US dollars/year economical cost worldwide. Dairy products, such as cheese, in particular cheeses with protected land- and tradition-related labels, have been listed as among the most impacted as consumers are ready to pay a premium price for traditional and typical products. In this context, efficient food authentication methods are needed to counteract current and emerging frauds. This review reports the available authentication methods, either chemical, physical, or DNA-based methods, currently used for origin authentication, highlighting their principle, reported application to cheese geographical origin authentication, performance, and respective advantages and limits. Isotope and elemental fingerprinting showed consistent accuracy in origin authentication. Other chemical and physical methods, such as near-infrared spectroscopy and nuclear magnetic resonance, require more studies and larger sampling to assess their discriminative power. Emerging DNA-based methods, such as metabarcoding, showed good potential for origin authentication. However, metagenomics, providing a more in-depth view of the cheese microbiota (up to the strain level), but also the combination of methods relying on different targets, can be of interest for this field.
Development of a Multifunctional Edible Coating and Its Preservation Effect on Sturgeon (Acipenser baeri♀× Acipenser schrenckii♂) Fillets during Refrigerated Storage at 4 °C
Authors: Tan Chunming , Pang De , Wu Ruiyun , Zou Fanglei , Zhang Bo , Shang Nan , Li Pinglan
Published: October 2022

Although many coatings and films can improve the quality and shelf life of fish fillets during refrigerated storage, a more multifunctional coating material is needed. In this study, an edible alginate/protein-based coating solution was prepared by incorporating antimicrobial agents. The coating properties were characterized and its effects on the quality and shelf life of sturgeon fillets during refrigeration (4 °C) were investigated. Compared with sodium alginate coating (2% sodium alginate + antibacterial agents, H), the composite coatings (2% sodium alginate + antibacterial agents + 1:15 or 1:10 protein solution, HP-15 and HP-10) exhibited a more stable structure and better light, gas, and water barrier properties, and showed better quality-preservation effects on sturgeon fillets. The composite coatings treatments, especially HP-10 composite coating, exhibited significant (p < 0.05) effects in inhibiting microbial growth, maintaining sensory quality, reducing the production of total volatile basic nitrogen (TVB-N), decreasing nucleotide breakdown, and delaying the lipid oxidation and protein degradation in fillets. These findings confirm that the composite coatings can be used as a multifunctional coating material for freshness preservation of sturgeon fillets to improve quality and extend shelf life.
Comprehensive Clinical and Genetic Analysis of CHEK2 in Croatian Men with Prostate Cancer
Authors: Kirchner Kira , Gamulin Marija , Kulis Tomislav , Sievers Bianca , Kastelan Zeljko , Lessel Davor
Published: October 2022

Germline pathogenic and likely pathogenic (P/LP) variants in CHEK2 have been associated with increased prostate cancer (PrCa) risk. Our objective was to analyze their occurrence in Croatian PrCa men and to evaluate the clinical characteristics of P/LP variant carriers. Therefore, we analyzed CHEK2 in 150 PrCa patients unselected for age of onset, family history of PrCa or clinical outcome, and the frequency of identified variants was compared to findings in 442 cancer-free men, of Croatian ancestry. We identified four PrCa cases harboring a P/LP variant in CHEK2 (4/150, 2.67%), which reached a statistical significance (p = 0.004) as compared to the control group. Patients with P/LP variants in CHEK2 developed PrCa almost 9 years earlier than individuals with CHEK2 wild-type alleles (8.9 years; p = 0.0198) and had an increased risk for lymph node involvement (p = 0.0047). No association was found between CHEK2 status and further clinical characteristics, including the Gleason score, occurrence of aggressive PrCa, the tumor or metastasis stage. However, carriers of the most common P/LP CHEK2 variant, the c.1100delC, p.Thr367Metfs15*, had a significantly higher Gleason score (p = 0.034), risk for lymph node involvement (p = 0.0001), and risk for developing aggressive PrCa (p = 0.027). Thus, in a Croatian population, CHEK2 P/LP variant carriers were associated with increased risk for early onset prostate cancer, and carriers of the c.1100delC, p.Thr367Metfs15* had increased risk for aggressive PrCa.
Functional Study on Cytochrome P450 in Response to L(−)-Carvone Stress in Bursaphelenchus xylophilus
Authors: Chen Jie , Hao Xin , Tan Ruina , Li Yang , Wang Bowen , Pan Jialiang , Ma Wei , Ma Ling
Published: October 2022

Bursaphelenchus xylophilus (PWN) causes pine wilt disease (PWD), which is one of the most devastating pine diseases worldwide. Cytochrome P450 (CYP) catalyzes the biosynthetic metabolism of terpenoids and plays an important role in the modification of secondary metabolites in all living organisms. We investigated the molecular characteristics and biological functions of Bx-cyp29A3 in B. xylophilus. The bioinformatics analysis results indicated that Bx-cyp29A3 has a transmembrane domain and could dock with L(−)-carvone. The gene expression pattern indicated that Bx-cyp29A3 was expressed in 0.2, 0.4, 0.6, 0.8, and 1.0 mg/mL L(−)-carvone solutions. The Bx-cyp29A3 expression increased in a dose-dependent manner and peaked at 24 h of exposure when the L(−)-carvone solution concentration was 0.8 mg/mL. However, the gene expression peaked at 0.6 mg/mL after 36 h. Furthermore, RNA interference (RNAi) indicated that Bx-cyp29A3 played an essential role in the response to L(−)-carvone. The mortality rates of the Bx-cyp29A3 knockdown groups were higher than those of the control groups in the 0.4, 0.6, 0.8, and 1.0 mg/mL carvone solutions after 24 h of exposure or 36 h of exposure. In summary, bioinformatics provided the structural characteristics and conserved sequence properties of Bx-cyp29A3 and its encoded protein, which provided a target gene for the study of the P450 family of B. xylophilus. Gene silencing experiments clarified the function of Bx-cyp29A3 in the immune defense of B. xylophilus. This study provides a basis for the screening of new molecular targets for the prevention and management of B. xylophilus.
Mental Well-Being of Czech University Students: Academic Motivation, Self-Compassion, and Self-Criticism
Authors: Kotera Yasuhiro , Maybury Sarah , Liu Gillian , Colman Rory , Lieu Jenai , Dosedlová Jaroslava
Published: October 2022

University students in the Czech Republic suffer from a low level of mental well-being. Research in other university student populations suggests that academic motivation, self-compassion, and self-criticism are strongly related to mental well-being. Students who are motivated to study, are kind toward themselves, and are less judgmental of themselves tend to have a high level of mental well-being. These relationships had not been evaluated in Czech students. Accordingly, this cross-sectional study aimed to evaluate the relationships between mental well-being, academic motivation (intrinsic motivation, extrinsic motivation, and amotivation), self-compassion (self-reassurance) and self-criticism (self-inadequacy and self-hate). Of 130 students approached, a convenience sampling of 119 psychology students at a university in the Czech Republic completed a survey regarding these constructs. Correlation, regression, and path analyses were conducted. Mental well-being was positively associated with intrinsic motivation and self-compassion, and negatively associated with amotivation and self-criticism. Self-compassion was identified as the strongest predictor of mental well-being. Lastly, intrinsic motivation mediated the pathway from self-compassion to mental well-being, but not the one from self-inadequacy to mental well-being, and the one from self-hate to mental well-being. Our findings can help educators to identify effective means to protect students’ mental well-being. Cultivating students’ self-compassion may be helpful to protect their mental well-being. University staff and educators in the Czech Republic need to consider ways to embed self-compassion training into their students’ programmes or university life.
Pharmacological Treatment of Arterial Hypertension in Children and Adolescents in Lithuania
Authors: Ivanova Eleonora , Ruzgienė Dovilė , Ažukaitis Karolis , Jankauskienė Augustina
Published: October 2022

The global prevalence of arterial hypertension (AH) in the pediatric population is increasing, but therapeutic approaches and the choice of the most suitable antihypertensive medications remains challenging. The study aimed to estimate the prevalence, treatment rates, and pharmacological treatment patterns of children and adolescents with AH in Lithuania during 2019 using real-world data. The study population consisted of citizens of Lithuania aged 0 to 17 years, who were diagnosed with AH according to the International Classification of Diseases (ICD). The analysis of reimbursed antihypertensive medication prescriptions was performed according to AH etiology and age. The overall prevalence of AH by diagnostic ICD codes in 2019 was 0.29%:0.24% for primary and 0.05% for secondary. Treatment rates were 39.8% for primary AH and 66.3% for secondary AH. Angiotensin-converting enzyme inhibitors (ACEi) were the most popular medications irrespective of the etiology of AH or age. Beta-blockers were in the second place and used more often in older children. Calcium channel blockers were the third and angiotensin receptor blockers were the fourth most frequent choices. Enalapril was the most popular agent in the ACEi group and metoprolol in the beta-blocker group. Nearly forty percent of Lithuanian children with primary AH receive pharmacological therapy compared to two-thirds with secondary AH. Although ACEi are the predominant class of antihypertensive medications, discordances with available guidelines are evident, particularly in the overuse of beta-blockers and underuse of diuretics.
Current Progress, Challenges and Perspectives in the Microalgal-Bacterial Aerobic Granular Sludge Process: A Review
Authors: Jiang Qianrong , Chen Honglei , Fu Zeding , Fu Xiaohua , Wang Jiacheng , Liang Yingqi , Yin Hailong , Yang Junbo , Jiang Jie , Yang Xinxin , Wang He , Liu Zhiming , Su Rongkui
Published: October 2022

Traditional wastewater treatment technologies have become increasingly inefficient to meet the needs of low-consumption and sustainable wastewater treatment. Researchers are committed to seeking new wastewater treatment technologies, to reduce the pressure on the environment caused by resource shortages. Recently, a microalgal-bacterial granular sludge (MBGS) technology has attracted widespread attention due to its high efficiency wastewater treatment capacity, low energy consumption, low CO2 emissions, potentially high added values, and resource recovery capabilities. This review focused primarily on the following aspects of microalgal-bacterial granular sludge technology: (1) MBGS culture and maintenance operating parameters, (2) MBGS application in different wastewaters, (3) MBGS additional products: biofuels and bioproducts, (4) MBGS energy saving and consumption reduction: greenhouse gas emission reduction, and (5) challenges and prospects. The information in this review will help us better understand the current progress and future direction of the MBGS technology development. It is expected that this review will provide a sound theoretical basis for the practical applications of a MBGS technology in environmentally sustainable wastewater treatment, resource recovery, and system optimization.
Application of Advanced Non-Linear Spectral Decomposition and Regression Methods for Spectroscopic Analysis of Targeted and Non-Targeted Irradiation Effects in an In-Vitro Model
Authors: Slattery Ciara , Nguyen Khanh , Shields Laura , Vega-Carrascal Isabel , Singleton Sean , Lyng Fiona M. , McClean Brendan , Meade Aidan D.
Published: October 2022

Irradiation of the tumour site during treatment for cancer with external-beam ionising radiation results in a complex and dynamic series of effects in both the tumour itself and the normal tissue which surrounds it. The development of a spectral model of the effect of each exposure and interaction mode between these tissues would enable label free assessment of the effect of radiotherapeutic treatment in practice. In this study Fourier transform Infrared microspectroscopic imaging was employed to analyse an in-vitro model of radiotherapeutic treatment for prostate cancer, in which a normal cell line (PNT1A) was exposed to low-dose X-ray radiation from the scattered treatment beam, and also to irradiated cell culture medium (ICCM) from a cancer cell line exposed to a treatment relevant dose (2 Gy). Various exposure modes were studied and reference was made to previously acquired data on cellular survival and DNA double strand break damage. Spectral analysis with manifold methods, linear spectral fitting, non-linear classification and non-linear regression approaches were found to accurately segregate spectra on irradiation type and provide a comprehensive set of spectral markers which differentiate on irradiation mode and cell fate. The study demonstrates that high dose irradiation, low-dose scatter irradiation and radiation-induced bystander exposure (RIBE) signalling each produce differential effects on the cell which are observable through spectroscopic analysis.
Microglia and Alzheimer’s Disease
Authors: Merighi Stefania , Nigro Manuela , Travagli Alessia , Gessi Stefania
Published: October 2022

There is a huge need for novel therapeutic and preventative approaches to Alzheimer’s disease (AD) and neuroinflammation seems to be one of the most fascinating solutions. The primary cell type that performs immunosurveillance and helps clear out unwanted chemicals from the brain is the microglia. Microglia work to reestablish efficiency and stop further degeneration in the early stages of AD but mainly fail in the illness’s later phases. This may be caused by a number of reasons, e.g., a protracted exposure to cytokines that induce inflammation and an inappropriate accumulation of amyloid beta (Aβ) peptide. Extracellular amyloid and/or intraneuronal phosphorylated tau in AD can both activate microglia. The activation of TLRs and scavenger receptors, inducing the activation of numerous inflammatory pathways, including the NF-kB, JAK-STAT, and NLRP3 inflammasome, facilitates microglial phagocytosis and activation in response to these mediators. Aβ/tau are taken up by microglia, and their removal from the extracellular space can also have protective effects, but if the illness worsens, an environment that is constantly inflamed and overexposed to an oxidative environment might encourage continuous microglial activation, which can lead to neuroinflammation, oxidative stress, iron overload, and neurotoxicity. The complexity and diversity of the roles that microglia play in health and disease necessitate the urgent development of new biomarkers that identify the activity of different microglia. It is imperative to comprehend the intricate mechanisms that result in microglial impairment to develop new immunomodulating therapies that primarily attempt to recover the physiological role of microglia, allowing them to carry out their core function of brain protection.
Factors Influencing the Use of Digital Marketing by Small and Medium-Sized Enterprises during COVID-19
Authors: Bermeo-Giraldo Maria Camila , Valencia-Arias Alejandro , Ramos de Rosas Javier D. , Benjumea-Arias Martha , Villanueva Calderón Juan Amilcar
Published: October 2022

This study aims to identify the factors that influence the use of digital marketing by SMEs in Medellín during COVID-19, proposing five factors that influence the use of these digital tools by 120 SMEs in Medellín, Colombia. The research was carried out under an exploratory factorial analysis, with a quantitative approach and an exploratory-descriptive scope. For data analysis, the levels of association between the constructs of the conceptual model and the intention to use these virtual tools were estimated, using Cramer’s V coefficient. The results identify the benefits perceived by customers, the perceived advantages of using digital tools, and business optimization as the key factors in predicting their acceptance and use. It is concluded that the most used digital marketing strategies are the content and web sites of Instagram and Facebook. As the main implications, the study contributes to understanding the behavior of companies regarding technological change which could help to identify needs and successful strategies that ensure the continuity and sustainability of this business sector. As limitations, the hypotheses were tested in a single context, so it is necessary to compare these results in developed countries to contribute to a global approach. In addition, only marketing professionals who held operational positions were surveyed, so future managers and leaders of the marketing area should be included in the studies.
A Novel Framework to Detect Irrelevant Software Requirements Based on MultiPhiLDA as the Topic Model
Authors: Siahaan Daniel , Darnoto Brian Rizqi Paradisiaca
Published: October 2022

Noise in requirements has been known to be a defect in software requirements specifications (SRS). Detecting defects at an early stage is crucial in the process of software development. Noise can be in the form of irrelevant requirements that are included within an SRS. A previous study had attempted to detect noise in SRS, in which noise was considered as an outlier. However, the resulting method only demonstrated a moderate reliability due to the overshadowing of unique actor words by unique action words in the topic–word distribution. In this study, we propose a framework to identify irrelevant requirements based on the MultiPhiLDA method. The proposed framework distinguishes the topic–word distribution of actor words and action words as two separate topic–word distributions with two multinomial probability functions. Weights are used to maintain a proportional contribution of actor and action words. We also explore the use of two outlier detection methods, namely percentile-based outlier detection (PBOD) and angle-based outlier detection (ABOD), to distinguish irrelevant requirements from relevant requirements. The experimental results show that the proposed framework was able to exhibit better performance than previous methods. Furthermore, the use of the combination of ABOD as the outlier detection method and topic coherence as the estimation approach to determine the optimal number of topics and iterations in the proposed framework outperformed the other combinations and obtained sensitivity, specificity, F1-score, and G-mean values of 0.59, 0.65, 0.62, and 0.62, respectively.
Relevance of the Scaphoid Shift Test for the Investigation of Scapholunate Ligament Injuries
Authors: Schmauss Daniel , Pöhlmann Sebastian , Weinzierl Andrea , Schmauss Verena , Moog Philipp , Germann Günter , Bickert Berthold , Megerle Kai
Published: October 2022

Background: Although it is part of the common clinical examination of scapholunate ligament pathologies, there are only little data on the diagnostic value of the scaphoid shift test. The aim of this study was to evaluate the scaphoid shift test in a large cohort of patients. Materials and Methods: We retrospectively analysed 447 patients who underwent the scaphoid shift test and wrist arthroscopy because of various suspected injuries of the wrist, correlating the results of clinical examination with data obtained during the wrist arthroscopy. Sensitivity, specificity, and positive and negative predictive values were calculated and evaluated. Results: The sensitivity of the scaphoid shift test was low (0.50) when examining the whole cohort. In a subgroup of patients specifically referred for suspected scapholunate ligament injury, the sensitivity was higher (0.61), but the specificity was low (0.62). In detecting more serious lesions (Geissler 3 + 4), the scaphoid shift test demonstrated higher sensitivity (0.66). Conclusions: An isolated scaphoid shift test may only be of limited value in the diagnosis of scapholunate ligament lesions and should, therefore, be viewed as a useful tool for a preliminary assessment, but a negative test should not prevent the surgeon from indicating a more extensive diagnostic workup.
Airway Ultrasound for Anesthesia and in Intensive Care Patients—A Narrative Review of the Literature
Authors: Lazar Alexandra Elena , Gherghinescu Mircea Constantin
Published: October 2022

Ultrasound is an everyday diagnostic tool. In anesthesia and intensive care, it has a role as an adjuvant for many procedures, including the evaluation of the airway. Ultrasound airway evaluation can help predict a difficult airway, visualize the proper positioning of an intubation cannula, or evaluate the airway post-intubation. Protocols need to be established for the better integration of ultrasound in the airway evaluation, however until a consensus is reached in this respect, the ultrasound is a reliable aid in anesthesia and intensive care.