bluuebunny/crossref_metadata_2025 huggingface dataset:
The Effect of Thermal Stress on the Bacterial Microbiome of Exaiptasia diaphana
Authors: Hartman Leon M. , van Oppen Madeleine J. H. , Blackall Linda L.
Published: December 2019

Coral bleaching linked to climate change has generated interest in the response of coral’s bacterial microbiome to thermal stress. The sea anemone, Exaiptasia diaphana, is a popular coral model, but the response of its bacteria to thermal stress has been barely explored. To address this, we compared the bacterial communities of Great Barrier Reef (GBR) E. diaphana maintained at 26 °C or exposed to increasing temperature (26–33 °C) over two weeks. Communities were analyzed by metabarcoding of the bacterial 16S rRNA gene. Bleaching and Symbiodiniaceae health were assessed by Symbiodiniaceae cell density and dark-adapted quantum yield (Fv/Fm), respectively. Significant bleaching and reductions in Fv/Fm occurred in the heat-treated anemones above 29 °C. Overall declines in bacterial alpha diversity in all anemones were also observed. Signs of bacterial change emerged above 31 °C. Some initial outcomes may have been influenced by relocation or starvation, but collectively, the bacterial community and taxa-level data suggested that heat was the primary driver of change above 32 °C. Six bacterial indicator species were identified as potential biomarkers for thermal stress. We conclude that the bacterial microbiome of GBR E. diaphana is generally stable until a thermal threshold is surpassed, after which significant changes occur.
HHV-6A Infection and Systemic Sclerosis: Clues of a Possible Association
Authors: Caselli Elisabetta , Soffritti Irene , D’Accolti Maria , Bortolotti Daria , Rizzo Roberta , Sighinolfi Gianluca , Giuggioli Dilia , Ferri Clodoveo
Published: December 2019

Systemic sclerosis (SSc) is an autoimmune disease characterized by vasculopathy, excessive extracellular matrix deposition, and fibrosis of the skin and internal organs. Several infectious agents, including human herpesvirus-6 (HHV-6), have been suggested as possible triggering factors, but a direct association is still missing. We characterized 26 SSc patients for the presence of HHV-6 in tissues and blood, the anti-HHV-6 response, HLA-G plasma levels, and KIR typing. Given the prominent role of endothelial cells (EC) in SSc pathogenesis, along with HHV-6 tropism for EC, we also investigated the expression of pro-fibrosis factors in HHV-6 infected EC. Results showed the presence of HHV-6A in skin biopsies, and an increased virus load was associated with disease severity and poor natural killer (NK) response against the virus, particularly in subjects exhibiting a KIR2 phenotype. HLA-G plasma levels were significantly higher in HHV-6A/B-KIR2 positive SSc patients and in vitro HHV-6A infection-induced pro-fibrosis factors expression in EC, supporting its role in the development of the fibrosing process. Our data suggest an association between virus infection/reactivation and disease, opening the way to future studies to understand the mechanisms by which HHV-6A might contribute to the multifactorial pathogenesis of SSc.
Application of Nano High-Entropy Alloys to Reduce Energy Consumption and Wear of Copper Oxide and High-Grade Iron Ores in Heavy Mining Industries—A Case Study
Authors: Heydartaemeh Mohammadreza , Karamoozian Mohammad , Potgieter Herman
Published: December 2019

Problems relating to the abrasion of equipment is one of the most important issues in mining and associated industries. Hardening is a method of protecting metal equipment, metal tools, or important components against erosion, corrosion, and abrasion. This can be achieved by welding a thin layer of abrasion-resistant metal onto the surface of the work piece. The useful life of a piece of equipment or parts can be significantly increased by applying abrasion-resistant coatings, thereby reducing repair or replacement costs associated with damaged parts. This process is inexpensive in the production of parts and is often economically justifiable. This study focuses on measuring the abrasion resistance of a nano high-entropy alloy against copper oxide and high-grade iron ores. When a base alloy was coated with the nano high-entropy alloy, the abrasion indexes of iron and copper ores decreased from 0.0001647 kg to 0.0000908 kg and from 0.0001472 kg to 0.0000803 kg, respectively. The standard deviation, repeatability, and reproducibility were calculated for the alloy steel blade covered with nano high entropy alloy (N-HEA), producing values of 0.00016, 0.00047, and 0.00040, respectively, while a standard alloy steel blade exhibited values of 0.0003, 0.00047, and 0.00042, respectively. High-entropy alloys and high-entropy nano-alloys have not been used as practical coatings in the mineral industry in any form to date. Utilizing high-entropy nano-alloys in this industry would introduce innovative alternatives for customers, thereby increasing competitive advantages and providing international markets and customers = with the most efficient choices of operational materials.
New Data and Evidence on the Mineralogy and Geochemistry of Wulantuga High-Ge Coal Deposit of Shengli Coalfield, Inner Mongolia, China
Authors: Yao Chen , Zhuang Xinguo , Querol Xavier , Li Jing , Li Baoqing , Moreno Natalia , Zhang Feng
Published: December 2019

The mode of occurrence and origin of highly-enriched trace elements, especially Ge, in Wulantuga high-Ge coal deposit have been widely reported. In this study, coal samples and several coalified trunks embedded within the roof strata are collected, which provides a good opportunity to further confirm if Ge is mainly associated with organic matter. Minerals in coal samples are mainly quartz, kaolinite, montmorillonite, pyrite, and gypsum, along with trace albite, barite, chlorite, and Fe-oxide, while those in coalified trunk samples include melanterite, pyrite, and gypsum, with traces of chlorite and magnesiocopiapite. Germanium, As, W, Sb, Hg, Be, and Cs are enriched in coal samples, and these elements are also enriched in the coalified trunks and roof glutenite. The elevated contents of Ge, As, W, Sb, and Hg were almost exclusively derived from the influx of hydrothermal fluids as evidenced by the presence of pyrite veins and chamosite as well as enhanced elemental associations of Ge-W and As-Sb-Hg in the studied lignite samples. The coalified trunks in the study area should be taken into consideration due to the high contents of hazardous elements that cause potential environmental impacts during mining waste disposal and land reclamation.
Deformation Features of Super-Deep Diamonds
Authors: Ragozin Alexey , Zedgenizov Dmitry , Shatsky Vladislav , Kuper Konstantin , Kagi Hiroyuki
Published: December 2019

The paper presents new data on the internal structure of super-deep (sublithospheric) diamonds from Saõ-Luiz river placers (Brazil) and from alluvial placers of the northeastern Siberian platform (Yakutia). The sublithospheric origin of these diamonds is supported by the presence of mineral inclusions corresponding to associations of the transition zone and lower mantle. The features of morphology and internal structure have been studied by optical and scanning electron microscopy (SEM), cathodoluminescence topography (CL), and electron backscatter diffraction (EBSD) techniques. Diamonds typically have complicated growth histories displaying alternating episodes of growth, dissolution, and post-growth deformation and crushing processes. Most crystals have endured both plastic and brittle deformation during the growth history. Abundant deformation and resorption/growth features suggest a highly dynamic growth environment for super-deep diamonds. High temperatures expected in the transition zone and lower mantle could explain the plastic deformations of super-deep diamonds with low nitrogen content.
Effect of the Modifications on the Physicochemical and Biological Properties of β-Glucan—A Critical Review
Authors: Yuan Hongjie , Lan Ping , He Yan , Li Chengliang , Ma Xia
Published: December 2019

β-Glucan exhibits many biological activities and functions such as stimulation of the immune system and anti-inflammatory, anti-microbial, anti-infective, anti-viral, anti-tumor, anti-oxidant, anti-coagulant, cholesterol-lowering, radio protective, and wound healing effects. It has a wide variety of uses in pharmaceutical, cosmetic, and chemical industries as well as in food processing units. However, due to its dense triple helix structure, formed by the interaction of polyhydroxy groups in the β-d-glucan molecule, it features poor solubility, which not only constrains its applications, but also inhibits its physiological function in vivo. One aim is to expand the applications for modified β-glucan with potential to prevent disease, various therapeutic purposes and as health-improving ingredients in functional foods and cosmetics. This review introduces the major modification methods required to understand the bioactivity of β-glucan and critically provides a literature survey on the structural features of this molecule and reported biological activity. We also discuss a new method to create novel opportunities to exploit maximally various properties of β-glucan, namely ultrasound-assisted enzymatic modification.
Effect of Heterocyclic Ring on LnIII Coordination, Luminescence and Extraction of Diamides of 2,2′-Bipyridyl-6,6′-Dicarboxylic Acid
Authors: Borisova Nataliya E. , Ivanov Alexey V. , Kharcheva Anastasia V. , Sumyanova Tsagana B. , Surkova Uliana V. , Matveev Petr I. , Patsaeva Svetlana V.
Published: December 2019

We have synthesized and examined several complexes of lanthanides with diamides of 2,2′-bipyridyl-6,6′-dicarboxylic acid bearing various hetaryl-based side chains for the elucidation of the effect of the heterocycle on the structure and properties of the ligands. The multigram scale methods for the preparation of various N-alkyl-hetaryls and their diamides were developed. The solid state structure of 6-methyl-2-pyridylamide of 2,2′-bipyridyl-6,6′-dicarboxylic acid possesses a flat structure where the conformation is completely different from that previously observed for N-alkylated 2,2′-bipyridyl-6,6′-dicarboxamides and 2,6-pyridinedicarboxamides. The complexes of new ligands were synthesized and NMR and X-Ray studied their structure in solution and solid state. The results demonstrate that complexes possess the same structures both in solid state and in solution. Stability constants of the complexes were less when comparing with dimethyl-substituted diamides, but higher than for unsubstituted dianilide. Contrarily, the extraction ability of 2-pyridyl-diamide is significantly lower than for corresponding anilide. Specific interaction of extractant with solvent molecules, which is not available for electron-sink pyridine amides, can explain this. The luminescence of new Eu complexes was significantly higher than for all previously 2,2′-bipyridyl-6,6′-dicarboxamides and QY reaches 18%. Asymmetry ratios of Eu complexes were 25% higher when compared other complexes with 2,2′-bipyridyl-6,6′-dicarboxamides, which indicates large deviation from the inversion center.
Toxicity and Antitumor Activity of a Thiophene–Acridine Hybrid
Authors: Lisboa Thaís , Silva Daiana , Duarte Sâmia , Ferreira Rafael , Andrade Camyla , Lopes Ana Luiza , Ribeiro Juliana , Farias Davi , Moura Ricardo , Reis Malu , Medeiros Karina , Magalhães Hemerson , Sobral Marianna
Published: December 2019

The antitumor effects of thiophene and acridine compounds have been described; however, the clinical usefulness of these compounds is limited due to the risk of high toxicity and drug resistance. The strategy of molecular hybridization presents the opportunity to develop new drugs which may display better target affinity and less serious side effects. Herein, 2-((6-Chloro-2-methoxy-acridin-9-yl)amino)-5,6,7,8-tetrahydro-4H-cyclohepta[b]-thiophene-3-carbonitrile (ACS03), a hybrid thiophene–acridine compound with antileishmanial activity, was tested for toxicity and antitumor activity. The toxicity was evaluated in vitro (on HaCat and peripheral blood mononuclear cells) and in vivo (zebrafish embryos and acute toxicity in mice). Antitumor activity was also assessed in vitro in HCT-116 (human colon carcinoma cell line), K562 (chronic myeloid leukemic cell line), HL-60 (human promyelocytic leukemia cell line), HeLa (human cervical cancer cell line), and MCF-7 (breast cancer cell line) and in vivo (Ehrlich ascites carcinoma model). ACS03 exhibited selectivity toward HCT-116 cells (Half maximal inhibitory concentration, IC50 = 23.11 ± 1.03 µM). In zebrafish embryos, ACS03 induced an increase in lactate dehydrogenase, glutathione S-transferase, and acetylcholinesterase activities. The LD50 (lethal dose 50%) value in mice was estimated to be higher than 5000 mg/kg (intraperitoneally). In vivo, ACS03 (12.5 mg/kg) induced a significant reduction in tumor volume and cell viability. In vivo antitumor activity was associated with the nitric oxide cytotoxic effect. In conclusion, significant antitumor activity and weak toxicity were recorded for this hybrid compound, characterizing it as a potential anticancer compound.
The Effect of Calcium on the Cohesive Strength and Flexural Properties of Low-Methoxyl Pectin Biopolymers
Authors: Byun Christine , Zheng Yifan , Pierce Aidan , Wagner Willi L. , Scheller Henrik V. , Mohnen Debra , Ackermann Maximilian , Mentzer Steven J.
Published: December 2019

Pectin binds the mesothelial glycocalyx of visceral organs, suggesting its potential role as a mesothelial sealant. To assess the mechanical properties of pectin films, we compared pectin films with a less than 50% degree of methyl esterification (low-methoxyl pectin, LMP) to films with greater than 50% methyl esterification (high-methoxyl pectin, HMP). LMP and HMP polymers were prepared by step-wise dissolution and high-shear mixing. Both LMP and HMP films demonstrated a comparable clear appearance. Fracture mechanics demonstrated that the LMP films had a lower burst strength than HMP films at a variety of calcium concentrations and hydration states. The water content also influenced the extensibility of the LMP films with increased extensibility (probe distance) with an increasing water content. Similar to the burst strength, the extensibility of the LMP films was less than that of HMP films. Flexural properties, demonstrated with the 3-point bend test, showed that the force required to displace the LMP films increased with an increased calcium concentration (p < 0.01). Toughness, here reflecting deformability (ductility), was variable, but increased with an increased calcium concentration. Similarly, titrations of calcium concentrations demonstrated LMP films with a decreased cohesive strength and increased stiffness. We conclude that LMP films, particularly with the addition of calcium up to 10 mM concentrations, demonstrate lower strength and toughness than comparable HMP films. These physical properties suggest that HMP has superior physical properties to LMP for selected biomedical applications.
Deep Blue Light Amplification from a Novel Triphenylamine Functionalized Fluorene Thin Film
Authors: Virgili Tersilla , Anni Marco , De Giorgi Maria Luisa , Borrego Varillas Rocio , Squeo Benedetta M. , Pasini Mariacecilia
Published: December 2019

The development of high performance optically pumped organic lasers operating in the deep blue still remains a big challenge. In this paper, we have investigated the photophysics and the optical gain characteristics of a novel fluorene oligomer functionalized by four triphenylamine (TPA) groups. By ultrafast spectroscopy we found a large gain spectral region from 420 to 500 nm with a maximum gain cross-section of 1.5 × 10−16 cm2 which makes this molecule a good candidate for photonic applications. Amplified Spontaneous Emission measurements (ASE) under 150 fs and 3 ns pump pulses have revealed a narrow emission at 450 nm with a threshold of 5.5 μJcm−2 and 21 μJcm−2 respectively. Our results evidence that this new fluorene molecule is an interesting material for photonic applications, indeed the inclusion of TPA as a lateral substituent leads to a high gain and consequently to a low threshold blue organic ASE.
Cell-Type-Specific Quantification of a Scaffold-Based 3D Liver Co-Culture
Authors: Ruoß Marc , Kieber Vanessa , Rebholz Silas , Linnemann Caren , Rinderknecht Helen , Häussling Victor , Häcker Marina , Olde Damink Leon H. H. , Ehnert Sabrina , Nussler Andreas K.
Published: December 2019

In order to increase the metabolic activity of human hepatocytes and liver cancer cell lines, many approaches have been reported in recent years. The metabolic activity could be increased mainly by cultivating the cells in 3D systems or co-cultures (with other cell lines). However, if the system becomes more complex, it gets more difficult to quantify the number of cells (e.g., on a 3D matrix). Until now, it has been impossible to quantify different cell types individually in 3D co-culture systems. Therefore, we developed a PCR-based method that allows the quantification of HepG2 cells and 3T3-J2 cells separately in a 3D scaffold culture. Moreover, our results show that this method allows better comparability between 2D and 3D cultures in comparison to the often-used approaches based on metabolic activity measurements, such as the conversion of resazurin.
A Novel Approach towards Synthesis and Characterization of Non-Cytotoxic Gold Nanoparticles Using Taurine as Capping Agent
Authors: Kumar Akash , Das Nabojit , Satija Neeraj Kumar , Mandrah Kapil , Roy Somendu Kumar , Rayavarapu Raja Gopal
Published: December 2019

Metal gold nanoparticles are of great interest due to their unique physico-chemical properties and their potential to be used as nano-probes in biosensors, drug delivery, and therapeutic applications. Currently, many capping agents are used for metal gold nanoparticles, such as cetyltrimethylammonium bromide (CTAB) and tri-sodium citrate that have been reported to be toxic and hinders biological applications. To address this issue, we report, for the first time, the use of taurine as a stable non-cytotoxic capping agent for synthesizing gold nanoparticles by using an in situ wet-chemical method. This facile method resulted in monodisperse gold nanospheres with a high yield and stability. Monodisperse gold nanospheres with average diameters of 6.9 nm and 46 nm were synthesized at a high yield with controlled morphology. Temperature played a critical role in determining the size of the taurine-capped gold nanoparticles. The subtle changes in the reaction parameters had a tremendous effect on the final size of nanoparticles and their stability. The synthesized nanoparticles were characterized by using optical spectroscopy, a ZetaSizer, a NanoSight, Fourier Transform Infrared (FTIR) spectroscopy, X-ray Diffraction (XRD), X-ray Photon Spectroscopy (XPS) and Electron Microscopy to understand their physico-chemical properties. Taurine was explored as a capping and stabilizing agent for gold nanospheres, which were evaluated for their toxicity responses towards human liver carcinoma cells (HepG2) via MTT assay.
A Novel Au@Cu2O-Ag Ternary Nanocomposite with Highly Efficient Catalytic Performance: Towards Rapid Reduction of Methyl Orange Under Dark Condition
Authors: Wu Tong , Kou Yichuan , Zheng Hui , Lu Jianing , Kadasala Naveen Reedy , Yang Shuo , Guo Chenzi , Liu Yang , Gao Ming
Published: December 2019

Au@Cu2O core-shell nanocomposites (NCs) were synthesized by reducing copper nitrate on Au colloids with hydrazine. The thickness of the Cu2O shells could be varied by adjusting the molar ratios of Au: Cu. The results showed that the thickness of Cu2O shells played a crucial role in the catalytic activity of Au@Cu2O NCs under dark condition. The Au@Cu2O-Ag ternary NCs were further prepared by a simple galvanic replacement reaction method. Moreover, the surface features were revealed by TEM, XRD, XPS, and UV–Vis techniques. Compared with Au@Cu2O NCs, the ternary Au@Cu2O-Ag NCs had an excellent catalytic performance. The degradation of methyl orange (MO) catalyzed by Au@Cu2O-Ag NCs was achieved within 4 min. The mechanism study proved that the synergistic effects of Au@Cu2O-Ag NCs and sodium borohydride facilitated the degradation of MO. Hence, the designed Au@Cu2O-Ag NCs with high catalytic efficiency and good stability are expected to be the ideal environmental nanocatalysts for the degradation of dye pollutants in wastewater.
Morpho-Structural, Thermal and Mechanical Properties of PLA/PHB/Cellulose Biodegradable Nanocomposites Obtained by Compression Molding, Extrusion, and 3D Printing
Authors: Frone Adriana Nicoleta , Batalu Dan , Chiulan Ioana , Oprea Madalina , Gabor Augusta Raluca , Nicolae Cristian-Andi , Raditoiu Valentin , Trusca Roxana , Panaitescu Denis Mihaela
Published: December 2019

Biodegradable blends and nanocomposites were produced from polylactic acid (PLA), poly(3-hydroxybutyrate) (PHB) and cellulose nanocrystals (NC) by a single step reactive blending process using dicumyl peroxide (DCP) as a cross-linking agent. With the aim of gaining more insight into the impact of processing methods upon the morphological, thermal and mechanical properties of these nanocomposites, three different processing techniques were employed: compression molding, extrusion, and 3D printing. The addition of DCP improved interfacial adhesion and the dispersion of NC in nanocomposites as observed by scanning electron microscopy and atomic force microscopy. The carbonyl index calculated from Fourier transform infrared spectroscopy showed increased crystallinity after DCP addition in PLA/PHB and PLA/PHB/NC, also confirmed by differential scanning calorimetry analyses. NC and DCP showed nucleating activity and favored the crystallization of PLA, increasing its crystallinity from 16% in PLA/PHB to 38% in DCP crosslinked blend and to 43% in crosslinked PLA/PHB/NC nanocomposite. The addition of DCP also influenced the melting-recrystallization processes due to the generation of lower molecular weight products with increased mobility. The thermo-mechanical characterization of uncross-linked and cross-linked PLA/PHB blends and nanocomposites showed the influence of the processing technique. Higher storage modulus values were obtained for filaments obtained by extrusion and 3D printed meshes compared to compression molded films. Similarly, the thermogravimetric analysis showed an increase of the onset degradation temperature, even with more than 10 °C for PLA/PHB blends and nanocomposites after extrusion and 3D-printing, compared with compression molding. This study shows that PLA/PHB products with enhanced interfacial adhesion, improved thermal stability, and mechanical properties can be obtained by the right choice of the processing method and conditions using NC and DCP for balancing the properties.
Effects of Collagen Hydrolysates on Human Brain Structure and Cognitive Function: A Pilot Clinical Study
Authors: Koizumi Seiko , Inoue Naoki , Sugihara Fumihito , Igase Michiya
Published: December 2019

This study investigated the effects of collagen hydrolysates (CH) on language cognitive function and brain structure. In this open-label study, 5 g CH was administered once a day for 4 weeks to 30 healthy participants aged 49–63 years. The primary outcome measures were the brain healthcare quotients based on gray matter volume (GM-BHQ) and fractional anisotropy (FA-BHQ). The secondary outcome measures were changes in scores between week 0 and week 4 for word list memory (WLM) and standard verbal paired associate learning (S-PA) tests as well as changes in the physical, mental, and role/social component summary scores of the Short Form-36(SF-36) quality of life instrument. CH ingestion resulted in significant improvements in FA-BHQ (p = 0.0095), a measure of brain structure, as well in scores for the WLM (p = 0.0046) and S-PA (p = 0.0007) tests, which measure cognitive function. There were moderate correlations between the change in WLM score and the change in GM-BHQ (r = 0.4448; Spearman’s rank correlation) and between the change in S-PA score and the change in FA-BHQ (r = 0.4645). Daily ingestion of CH changed brain structure and improved language cognitive function.
Sodium and Potassium Intakes and Cardiovascular Risk Profiles in Childhood Cancer Survivors: The SCCSS-Nutrition Study
Authors: Belle Fabiën N. , Schindera Christina , Guessous Idris , Beck Popovic Maja , Ansari Marc , Kuehni Claudia E. , Bochud Murielle
Published: December 2019

Risk of cardiovascular disease (CVD), common in childhood cancer survivors (CCSs), may be affected by diet. We assessed sodium (Na) and potassium (K) intake, estimated from food frequency questionnaires (FFQs) and morning urine spots, and its associations with cardiovascular risk in CCSs. We stratified CCSs into three risk profiles based on (A) personal history (CVD, CVD risk factors, or CVD risk-free), (B) body mass index (obese, overweight, or normal/underweight), and (C) cardiotoxic treatment (anthracyclines and/or chest irradiation, or neither). We obtained an FFQ from 802 and sent a spot urine sample collection kit to 212, of which 111 (52%) returned. We estimated Na intake 2.9 g/day based on spot urine and 2.8 g/day based on FFQ; the estimated K intake was 1.6 g/day (spot urine) and 2.7 g/day (FFQ). CCSs with CVD risk factors had a slightly higher Na intake (3.3 g/day), than CCSs risk free (2.9 g/day) or with CVD (2.7 g/day, p = 0.017), and obese participants had higher Na intake (4.2 g/day) than normal/underweight CCSs (2.7 g/day, p < 0.001). Daily Na intake was above, and daily K intake below, the national recommended levels. Adult survivors of childhood cancer need dietary assistance to reduce Na and increase K intake.
Evaluation of the Containment of Antimicrobial-Resistant Salmonella Species from a Hazard Analysis and Critical Control Point (HACCP) and a Non-HACCP Pig Slaughterhouses in Northeast Thailand
Authors: Wu Xin , Suksawat Fanan , Richards Allen L. , Phommachanh Seangphed , Phongaran Dusadee , Angkititrakul Sunpetch
Published: December 2019

To evaluate the containment of antimicrobial-resistant (AMR) Salmonella contaminations of a HACCP slaughterhouse (HACCP SH) and a non-HACCP slaughterhouse (non-HACCPSH), 360 paired pig rectal (representing the farm pig status) and carcass samples (representing the contamination) were collected equally from the two slaughterhouses that serviced 6 and 12 farms, respectively, in Northeast Thailand (n = 720). The purified Salmonella isolates were serotype identified, antimicrobial susceptibility tested, and pulsed-field gel electrophoresis (PFGE) assessed. Four evaluations of two slaughterhouses were examined: (1) the means of slaughtering contamination rates (SCR) (to evaluate the contamination level by averaged farm SCRs): the HACCP SH decreased contamination (SCR: −48.89% ± 8.80%, n = 6), whereas the non-HACCP SH increased (SCR: 14.31% ± 9.35%, n = 12). (2) The serotype diversity: the HACCP SH decreased the diversity from the rectal group (110 isolates, 9 serotypes) to carcass group (23 isolates, 3 serotypes), whereas there was no decrease in the non-HACCP SH (rectal group (66 isolates, 14 serotypes) and carcass group (31 isolates, 10 serotypes)). (3) The AMR patterns: the HACCP SH decreased from rectal group (96 isolates, 7 patterns) to carcass group (22 isolates, 1 pattern), whereas there was no decrease from the non-HACCP SH rectal group (22 isolates, 7 patterns) to carcass group (48 isolates, 8 patterns). (4) The estimated indirect contamination rate (by serotype screening and PFGE confirmation): the HACCP SH was 60.87% (14/23), whereas the non-HACCP SH was 98.48% (65/66). This study indicates that both the slaughterhouses keep a high level of indirect contamination; the HACCP SH decreases Salmonella contaminations and reduces the AMR patterns, the non-HACCP SH increases contaminations.
Characterization and Expression Analysis of the Ca2+/Cation Antiporter Gene Family in Tomatoes
Authors: Amagaya Kayoko , Shibuya Tomoki , Nishiyama Manabu , Kato Kazuhisa , Kanayama Yoshinori
Published: December 2019

The Ca2+/cation antiporter (CaCA) superfamily plays an important role in the regulation of the essential element Ca2+ and cation concentrations. Characterization and expression analyses of CaCA superfamily genes were performed in the tomato (Solanum lycopersicum) as a representative of dicotyledonous plants and fruit crops. Sixteen CaCA candidate genes were found and identified as tomato CaCA, SlCaCA, by a domain search. In a phylogenetic analysis of the SlCaCA superfamily, the 16 genes were classified into SlCAX, SlNCL, SlCCX, and SlMHX families. Among them, Solyc12g011070, belonging to the SlCAX family, had four splice variants, three of which were predicted to be nonfunctional because of a lack of important motifs. EF-hand domains were only found in SlNCL, in addition to consensus Na_Ca_ex domains, and the region containing EF-hand domains was characteristically long in some members of SlNCL. Furthermore, four genes of the SlCCX family were found to be intronless. As for intracellular localization, one SlCCX member was predicted to be localized to the plasma membrane, while other SlCCXs, SlCAXs, and SlMHXs were predicted to be localized to the vacuolar membrane. The expression patterns of SlCaCAs in various organs, including during several developmental stages of fruit, were classified into four groups. Genes involved in each of the SlCAX, SlNCL, and SlCCX gene families were categorized into three or four groups according to expression patterns, suggesting role sharing within each family. The main member in each subfamily and the members with characteristic fruit expression patterns included genes whose expression was regulated by sugar or auxin and that were highly expressed in a line having metabolite-rich fruit.
Enzymatic Properties of Recombinant Phospho-Mimetic Photorespiratory Glycolate Oxidases from Arabidopsis thaliana and Zea mays
Authors: Jossier Mathieu , Liu Yanpei , Massot Sophie , Hodges Michael
Published: December 2019

In photosynthetic organisms, the photorespiratory cycle is an essential pathway leading to the recycling of 2-phosphoglycolate, produced by the oxygenase activity of ribulose-1,5-bisphosphate carboxylase/oxygenase, to 3-phosphoglycerate. Although photorespiration is a widely studied process, its regulation remains poorly understood. In this context, phosphoproteomics studies have detected six phosphorylation sites associated with photorespiratory glycolate oxidases from Arabidopsis thaliana (AtGOX1 and AtGOX2). Phosphorylation sites at T4, T158, S212 and T265 were selected and studied using Arabidopsis and maize recombinant glycolate oxidase (GOX) proteins mutated to produce either phospho-dead or phospho-mimetic enzymes in order to compare their kinetic parameters. Phospho-mimetic mutations (T4D, T158D and T265D) led to a severe inhibition of GOX activity without altering the KM glycolate. In two cases (T4D and T158D), this was associated with the loss of the cofactor, flavin mononucleotide. Phospho-dead versions exhibited different modifications according to the phospho-site and/or the GOX mutated. Indeed, all T4V and T265A enzymes had kinetic parameters similar to wild-type GOX and all T158V proteins showed low activities while S212A and S212D mutations had no effect on AtGOX1 activity and AtGOX2/ZmGO1 activities were 50% reduced. Taken together, our results suggest that GOX phosphorylation has the potential to modulate GOX activity.
On the Use of Gallic Acid as a Potential Natural Antioxidant and Ultraviolet Light Stabilizer in Cast-Extruded Bio-Based High-Density Polyethylene Films
Authors: Quiles-Carrillo Luis , Montava-Jordà Sergi , Boronat Teodomiro , Sammon Chris , Balart Rafael , Torres-Giner Sergio
Published: December 2019

This study originally explores the use of gallic acid (GA) as a natural additive in bio-based high-density polyethylene (bio-HDPE) formulations. Thus, bio-HDPE was first melt-compounded with two different loadings of GA, namely 0.3 and 0.8 parts per hundred resin (phr) of biopolymer, by twin-screw extrusion and thereafter shaped into films using a cast-roll machine. The resultant bio-HDPE films containing GA were characterized in terms of their mechanical, morphological, and thermal performance as well as ultraviolet (UV) light stability to evaluate their potential application in food packaging. The incorporation of 0.3 and 0.8 phr of GA reduced the mechanical ductility and crystallinity of bio-HDPE, but it positively contributed to delaying the onset oxidation temperature (OOT) by 36.5 °C and nearly 44 °C, respectively. Moreover, the oxidation induction time (OIT) of bio-HDPE, measured at 210 °C, was delayed for up to approximately 56 and 240 min, respectively. Furthermore, the UV light stability of the bio-HDPE films was remarkably improved, remaining stable for an exposure time of 10 h even at the lowest GA content. The addition of the natural antioxidant slightly induced a yellow color in the bio-HDPE films and it also reduced their transparency, although a high contact transparency level was maintained. This property can be desirable in some packaging materials for light protection, especially UV radiation, which causes lipid oxidation in food products. Therefore, GA can successfully improve the thermal resistance and UV light stability of green polyolefins and will potentially promote the use of natural additives for sustainable food packaging applications.
Assessment of Photodegradation and Biodegradation of RPU/PIR Foams Modified by Natural Compounds of Plant Origin
Authors: Liszkowska Joanna , Borowicz Marcin , Paciorek-Sadowska Joanna , Isbrandt Marek , Czupryński Bogusław , Moraczewski Krzysztof
Published: December 2019

Four types of rigid polyurethane-polyisocyanurate foams (RPU/PIR) were obtained. Three of them were modified by powder fillers, such as cinnamon extract (C10 foam), green coffe extract (KZ10), and cocoa extract (EK10) in an amount of 10 wt %. The last foam was obtained without a filler (W foam). The basic properties and thermal properties of obtained foams were examined. All foams were subjected to degradation in the climatic chamber acting on samples of foams in a defined temperature, humidity, and UV radiation for 7, 14, and 21 days. The physico-mechanical properties of foams were tested. The compressive strength of degraded foams after 7, 14, and 21 days was compared with the compressive strength of nondegraded foams (0 days). The chosen properties of degraded foams, such as cellular structure by scanning electron microscopy (SEM) and changes of chemical structure by FTIR spectroscopy were compared. The obtained foams were also subjected to degradation in a circulating air dryer in an increased temperature (120 °C) for 48 h. Additionally, W, C10, ZK10, EK10 foams were placed in a soil environment and subjected to 28 days biodegradation process. The biochemical oxygen demand (BOD), the theoretical oxygen demand (TOD), and the degree of biodegradation (Dt) of foams were determined in this measurment. Test results showed that the compressive strength of foams decreased with the longer time of foam degradation in the conditioner. The foam subjected to degradation darkened and became more red and yellow in color. The addition of natural compounds of plant origin to foams increased their susceptibility to biodegradation.
High Throughput Manufacturing of Bio-Resorbable Micro-Porous Scaffolds Made of Poly(L-lactide-co-ε-caprolactone) by Micro-Extrusion for Soft Tissue Engineering Applications
Authors: Mendibil Xabier , Ortiz Rocío , Sáenz de Viteri Virginia , Ugartemendia Jone M. , Sarasua Jose-Ramon , Quintana Iban
Published: December 2019

Porous scaffolds made of elastomeric materials are of great interest for soft tissue engineering. Poly(L-lactide-co-ε-caprolactone) (PLCL) is a bio-resorbable elastomeric copolymer with tailorable properties, which make this material an appropriate candidate to be used as scaffold for vascular, tendon, and nerve healing applications. Here, extrusion was applied to produce porous scaffolds of PLCL, using NaCl particles as a leachable agent. The effects of the particle proportion and size on leaching performance, dimensional stability, mechanical properties, and ageing of the scaffolds were analyzed. The efficiency of the particle leaching and scaffold swelling when wet were observed to be dependent on the porogenerator proportion, while the secant moduli and ultimate tensile strengths were dependent on the pore size. Porosity, swelling, and mechanical properties of the extruded scaffolds were tailorable, varying with the proportion and size of porogenerator particles and showed similar values to human soft tissues like nerves and veins (E = 7–15 MPa, σu = 7 MPa). Up to 300-mm length micro-porous PLCL tube with 400-µm thickness wall was extruded, proving extrusion as a high-throughput manufacturing process to produce tubular elastomeric bio-resorbable porous scaffolds of unrestricted length with tunable mechanical properties.
Synthesis and Physicochemical Characterization of Undecylenic Acid Grafted to Hyaluronan for Encapsulation of Antioxidants and Chemical Crosslinking
Authors: Huerta-Ángeles Gloria , Brandejsová Martina , Kopecká Kateřina , Ondreáš František , Medek Tomáš , Židek Ondrej , Kulhánek Jaromír , Vagnerová Hana , Velebný Vladimir
Published: December 2019

In this work, a new amphiphilic derivative made of 10-undecylenic acid grafted to hyaluronan was prepared by mixed anhydrides. The reaction conditions were optimized, and the effect of the molecular weight (Mw), reaction time, and the molar ratio of reagents was explored. Using this methodology, a degree of substitution up to 50% can be obtained. The viscosity of the conjugate can be controlled by varying the substitution degree. The physicochemical characterization of the modified hyaluronan was performed by infrared spectroscopy, Nuclear Magnetic Resonance, Size-Exclusion Chromatography combined with Multiangle Laser Light Scattering (SEC-MALLS), and rheology. The low proton motility and self-aggregation of the amphiphilic conjugate produced overestimation of the degree of substitution. Thus, a novel method using proton NMR was developed. Encapsulation of model hydrophobic guest molecules, coenzyme Q10, curcumin, and α-tocopherol into the micellar core was also investigated by solvent evaporation. HA-UDA amphiphiles were also shown to self-assemble into spherical nanostructures (about 300 nm) in water as established by dynamic light scattering. Furthermore, HA-UDA was crosslinked via radical polymerization mediated by ammonium persulphate (APS/TEMED). The cross-linking was also tested by photo-polymerization catalyzed by Irgacure 2959. The presence of the hydrophobic moiety decreases the swelling degree of the prepared hydrogels compared to methacrylated-HA. Here, we report a novel hybrid hyaluronan (HA) hydrogel system of physically encapsulated active compounds and chemical crosslinking for potential applications in drug delivery.
Multi-Objective Parameter Optimization Dynamic Model of Grinding Processes for Promoting Low-Carbon and Low-Cost Production
Authors: Hu Mingmao , Sun Yu , Gong Qingshan , Tian Shengyang , Wu Yuemin
Published: December 2019

Grinding is widely used in mechanical manufacturing to obtain both precision and part requirements. In order to achieve carbon efficiency improvement and save costs, carbon emission and processing cost models of the grinding process are established in this study. In the modeling process, a speed-change-based adjustment function was introduced to dynamically derive the change of the target model. The carbon emission model was derived from the grinding force using regression. Considering the constraints of machine tool equipment performance and processing quality requirements, the grinding wheel’s linear velocity, cutting feed rate, and the rotation speed of the workpiece were selected as the optimization variables, and the improved NSGA-II algorithm was applied to solve the optimization model. Finally, fuzzy matter element analysis was used to evaluate the most optimal processing plan.
Iron Oxide/Chitosan Magnetic Nanocomposite Immobilized Manganese Peroxidase for Decolorization of Textile Wastewater
Authors: Siddeeg Saifeldin M. , Tahoon Mohamed A. , Mnif Wissem , Ben Rebah Faouzi
Published: December 2019

Because of its effectiveness in organic pollutant degradation, manganese peroxidase (MnP) enzyme has attracted significant attention in recent years regarding its use for wastewater treatment. Herein, MnP was extracted from Anthracophyllum discolor fungi and immobilized on the surface of magnetic nanocomposite Fe3O4/chitosan. The prepared nanocomposite offered a high surface area for MnP immobilization. The influence of several environmental factors like temperature, pH, as well as storage duration on the activity of the extracted enzyme has been studied. Fourier transmission infrared spectroscopy (FT-IR), scanning electron microscope (SEM), X-ray diffraction (XRD), and transmission electron microscope (TEM) techniques were used for the characterization of the prepared MnP/Fe3O4/chitosan nanocomposite. The efficiencies of the prepared MnP/Fe3O4/chitosan nanocomposite for the elimination of reactive orange 16 (RO 16) and methylene blue (MB) industrial dyes were determined. According to the results, the immobilization of MnP on Fe3O4/chitosan nanocomposite increases its capacity to decolorize MB and RO 16. This nanocomposite allowed the removal of 96% ± 2% and 98% ± 2% of MB and RO 16, respectively. The reusability of the synthesized nanocomposite was studied for five successive cycles showing the ability to retain its efficiency even after five cycles. Thus, the prepared MnP/Fe3O4/chitosan nanocomposite has potential to be a promising material for textile wastewater bioremediation.
Attack Graph Implementation and Visualization for Cyber Physical Systems
Authors: Ibrahim Mariam , Al-Hindawi Qays , Elhafiz Ruba , Alsheikh Ahmad , Alquq Omar
Published: December 2019

Cyber-attacks threaten the safety of cyber physical systems (CPSs) as a result of the existence of weaknesses in the multiple structural units constituting them. In this paper, three cyber physical systems case studies of a pressurized water nuclear power plant (NPP), an industrial control system (ICS), and a vehicular network system (VNS) are examined, formally presented, and implemented utilizing Architecture Analysis and Design Language, determining system design, links, weaknesses, resources, potential attack instances, and their pre-and post-conditions. Then, the developed plant models are checked with a security property using JKind model checker embedded software. The attack graphs causing plants disruptions for the three applications are graphically visualized using a new graphical user interface (GUI) windows application.
Single Controller-Based Colored Petri Nets for Deadlock Control in Automated Manufacturing Systems
Authors: Kaid Husam , Al-Ahmari Abdulrahman , Li Zhiwu , Davidrajuh Reggie
Published: December 2019

Deadlock control approaches based on Petri nets are usually implemented by adding control places and related arcs to the Petri net model of a system. The main disadvantage of the existing policies is that many control places and associated arcs are added to the initially constructed Petri net model, which significantly increases the complexity of the supervisor of the Petri net model. The objective of this study is to develop a two-step robust deadlock control approach. In the first step, we use a method of deadlock prevention based on strict minimal siphons (SMSs) to create a controlled Petri net model. In the second step, all control places obtained in the first step are merged into a single control place based on the colored Petri net to mark all SMSs. Finally, we compare the proposed method with the existing methods from the literature.
GC-MS Fingerprints Profiling Using Machine Learning Models for Food Flavor Prediction
Authors: Bi Kexin , Zhang Dong , Qiu Tong , Huang Yizhen
Published: December 2019

Food flavor quality evaluation is attracting continuous attention, but a suitable evaluation system is severely lacking. Gas chromatography-mass spectrometry/olfactometry (GC-MS/O) is widely used to solve the food flavor evaluation problem, but the olfactometry evaluation is unfeasible to be carried out in large batches and is unreliable due to potential issue of an operator or systematic laboratory effect. Thus, a novel fingerprint modeling and profiling process was proposed based on several machine learning models including convolutional neural network (CNN). The fingerprint template was created by the data analysis of existing GC-MS spectrum dataset. Then the fingerprint image generation program was applied for structuring the complex instrumental data. Food olfactometry result was obtained by a machine learning method based on CNN using fingerprint image as the input. The case study on peanut oil samples demonstrated the model accuracy of around 93%. By structure optimization and further dataset expansion, the whole process has the potential to be utilized by sensory laboratories for aroma analysis instead of humans.
Phase Change and Heat Transfer Characteristics of a Corrugated Plate Heat Exchanger
Authors: Su Huashan , Hu Chaoqun , Gao Zhenjun , Hu Tao , Wang Gang , Yu Wan
Published: December 2019

In order to reveal the evolution law of heat transfer during phase change in a corrugated plate flow passage of a plate heat exchanger, a two-dimensional two-channel model was established to simulate the process of heat transfer during phase change in an unsteady flow passage. The results show that when the time was <3/5T, the average Nusselt number and average heat flux of the heat exchange wall surface decreased with time, the average temperature of the cold fluid outlet increased, the average temperature of the hot fluid outlet decreased, and the volume fraction of the gas phase was no higher than 0.2. When the time was >3/5T, the average Nusselt number and the average heat flux of the heat exchange wall, as well as the outlet average temperature of the cold and hot fluid, reached stability, while the volume fraction of the gas phase increased rapidly. During the whole heat transfer process, the change in Nusselt number and heat flux along the heat transfer wall surface was basically the same, and its value fluctuated along the wall surface, displaying extrema at the exit, entrance, and corrugated corner. The temperature of the heat exchange wall fluctuated and increased along the Y-axis, and began stabilizing after a time >3/5T. As time went on, the temperature gradient of the hot and cold fluid outlet and the temperature difference between the two sides of the heat exchange wall decreased, whereas the relative parameters of the heat flow inlet section of the corrugated passage reached stability before those of the cold flow inlet section. The whole simulation process fully reflects the heat transfer mechanism during phase change in a corrugated plate flow passage of a plate heat exchanger.