bluuebunny/crossref_metadata_2025 huggingface dataset:
Neuroprotective and anti-epileptic potentials of genus Artemisia L.
Authors: Sailike Bayan , Omarova Zhannur , Jenis Janar , Adilbayev Altynay , Akbay Burkitkan , Askarova Sholpan , Jin Wei-Lin , Tokay Tursonjan
Published: October 2022

The Genus Artemisia L. is one of the largest genera in the Asteraceae family growing wild over in Europe, North America, and Central Asia and has been widely used in folk medicine for the treatment of various ailments. Phytochemical and psychopharmacological studies indicated that the genus Artemisia extracts contain various antioxidant and anti-inflammatory compounds and possess antioxidant, anti-inflammatory, antimicrobial, antimalarial, and antitumor activity. Recently, increasing experimental studies demonstrated that many Artemisia extracts offer a great antiepileptic potential, which was attributed to their bioactive components via various mechanisms of action. However, detailed literature on the antiepileptic properties of the genus Artemisia and its mechanism of action is segregated. In this review, we tried to gather the detailed neuroprotective and antiepileptic properties of the genus Artemisia and its possible underlying mechanisms. In this respect, 63 articles were identified in the PubMed and Google scholars databases, from which 18 studies were examined based on the pharmacological use of the genus Artemisia species in epilepsy. The genus Artemisia extracts have been reported to possess antioxidant, anti-inflammatory, neurotransmitter-modulating, anti-apoptotic, anticonvulsant, and pro-cognitive properties by modulating oxidative stress caused by mitochondrial ROS production and an imbalance of antioxidant enzymes, by protecting mitochondrial membrane potential required for ATP production, by upregulating GABA-A receptor and nACh receptor activities, and by interfering with various anti-inflammatory and anti-apoptotic signaling pathways, such as mitochondrial apoptosis pathway, ERK/CREB/Bcl-2 pathway and Nrf2 pathway. This review provides detailed information about some species of the genus Artemisia as potential antiepileptic agents. Hence, we recommend further investigations on the purification and identification of the most biological effective compounds of Artemisia and the mechanisms of their action to cure epilepsy and other neurological diseases.
The therapeutic potential of triptolide and celastrol in neurological diseases
Authors: Cui Yueran , Jiang Xuejiao , Feng Juan
Published: October 2022

Neurological diseases are complex diseases affecting the brain and spinal cord, with numerous etiologies and pathogenesis not yet fully elucidated. Tripterygium wilfordii Hook. F. (TWHF) is a traditional Chinese medicine with a long history of medicinal use in China and is widely used to treat autoimmune and inflammatory diseases such as systemic lupus erythematosus and rheumatoid arthritis. With the rapid development of modern technology, the two main bioactive components of TWHF, triptolide and celastrol, have been found to have anti-inflammatory, immunosuppressive and anti-tumor effects and can be used in the treatment of a variety of diseases, including neurological diseases. In this paper, we summarize the preclinical studies of triptolide and celastrol in neurological diseases such as neurodegenerative diseases, brain and spinal cord injury, and epilepsy. In addition, we review the mechanisms of action of triptolide and celastrol in neurological diseases, their toxicity, related derivatives, and nanotechnology-based carrier system.
Endogenous reparative pluripotent Muse cells with a unique immune privilege system: Hint at a new strategy for controlling acute and chronic inflammation
Authors: Kuroda Yasumasa , Oguma Yo , Hall Kerrigan , Dezawa Mari
Published: October 2022

Multilineage-differentiating stress enduring (Muse) cells, non-tumorigenic endogenous pluripotent stem cells, reside in the bone marrow (BM), peripheral blood, and connective tissue as pluripotent surface marker SSEA-3(+) cells. They express other pluripotent markers, including Nanog, Oct3/4, and Sox2 at moderate levels, differentiate into triploblastic lineages, self-renew at a single cell level, and exhibit anti-inflammatory effects. Cultured mesenchymal stromal cells (MSCs) and fibroblasts contain several percent of SSEA-3(+)-Muse cells. Circulating Muse cells, either endogenous or administered exogenously, selectively accumulate at the damaged site by sensing sphingosine-1-phosphate (S1P), a key mediator of inflammation, produced by damaged cells and replace apoptotic and damaged cells by spontaneously differentiating into multiple cells types that comprise the tissue and repair the tissue. Thus, intravenous injection is the main route for Muse cell treatment, and surgical operation is not necessary. Furthermore, gene introduction or cytokine induction are not required for generating pluripotent or differentiated states prior to treatment. Notably, allogenic and xenogenic Muse cells escape host immune rejection after intravenous injection and survive in the tissue as functioning cells over 6 and ∼2 months, respectively, without immunosuppressant treatment. Since Muse cells survive in the host tissue for extended periods of time, therefore their anti-inflammatory, anti-fibrotic, and trophic effects are long-lasting. These unique characteristics have led to the administration of Muse cells via intravenous drip in clinical trials for stroke, acute myocardial infarction, epidermolysis bullosa, spinal cord injury, neonatal hypoxic ischemic encephalopathy, amyotrophic lateral sclerosis, and COVID-19 acute respiratory distress syndrome without HLA-matching or immunosuppressive treatment.
Chaihu-shugan-san alleviates depression-like behavior in mice exposed to chronic unpredictable stress by altering the gut microbiota and levels of the bile acids hyocholic acid and 7-ketoDCA
Authors: Ma Chong , Yuan Dun , Renaud Stephen James , Zhou Ting , Yang Fan , Liou Yuligh , Qiu Xinjian , Zhou Lu , Guo Ying
Published: October 2022

Chaihu-Shugan-San (CSS) is a traditional botanical drug formula often prescribed to treat depression in oriental countries, but its pharmacotherapeutic mechanism remains unknown. It was recently reported that CSS alters the composition of intestinal microflora and related metabolites such as bile acids (BAs). Since the intestinal microflora affects physiological functions of the brain through the gut-microbiota-brain axis, herein we investigated whether CSS altered BA levels, gut microflora, and depression-like symptoms in chronic unpredictable mild stress (CUMS) mice, a well-established mouse model of depression. Furthermore, we determined whether BA manipulation and fecal microbiota transplantation altered CSS antidepressant actions. We found that the BA chelator cholestyramine impaired the antidepressant effects of CSS, which was partially rescued by dietary cholic acid. CSS increased the relative abundance of Parabacteroides distasonis in the colon of CUMS mice, and increased serum levels of various BAs including hyocholic acid (HCA) and 7-ketodeoxycholic acid (7-ketoDCA). Furthermore, gut bacteria transplantation from CSS-treated mice into untreated or cholestyramine-treated CUMS mice restored serum levels of HCA and 7-ketoDCA, alleviating depression-like symptoms. In the hippocampus, CSS-treated mice had decreased expression of genes associated with BA transport (Bsep and Fxr) and increased expression of brain-derived neurotrophic factor and its receptor, TrkB. Overall, CSS increases intestinal P. distasonis abundance, leading to elevated levels of secondary BAs in the circulation and altered expression of hippocampal genes implicated in BA transport and neurotrophic signaling. Our data strongly suggest that the gut microbiota-brain axis contributes to the potent antidepressant action of CSS by modulating BA metabolism.
Platelet derived growth factor promotes the recovery of traumatic brain injury by inhibiting endoplasmic reticulum stress and autophagy-mediated pyroptosis
Authors: Wu Fangfang , Zhang Renkan , Meng Weiyang , Liu Lei , Tang Yingdan , Lu Leilei , Xia Leilei , Zhang Hongyu , Feng Zhiguo , Chen Daqing
Published: October 2022

Autophagy and endoplasmic reticulum stress (ER stress) are important in numerous pathological processes in traumatic brain injury (TBI). Growing evidence has indicated that pyroptosis-associated inflammasome is involved in the pathogenesis of TBI. Platelet derived growth factor (PDGF) has been reported to be as a potential therapeutic drug for neurological diseases. However, the roles of PDGF, autophagy and ER stress in pyroptosis have not been elucidated in the TBI. This study investigated the roles of ER stress and autophagy after TBI at different time points. We found that the ER stress and autophagy after TBI were inhibited, and the expressions of pyroptosis-related proteins induced by TBI, including NLRP3, Pro-Caspase1, Caspase1, GSDMD, GSDMD P30, and IL-18, were decreased upon PDGF treatment. Moreover, the rapamycin (RAPA, an autophagy activator) and tunicamycin (TM, an ER stress activator) eliminated the PDGF effect on the pyroptosis after TBI. Interestingly, the sodium 4-phenylbutyrate (4-PBA, an ER stress inhibitor) suppressed autophagy but 3-methyladenine (3-MA, an autophagy inhibitor) not for ER stress. The results revealed that PDGF improved the functional recovery after TBI, and the effects were markedly reversed by TM and RAPA. Taken together, this study provides a new insight that PDGF is a potential therapeutic strategy for enhancing the recovery of TBI.
Prevention and treatment of ventilator-associated pneumonia in COVID-19
Authors: Deng Jiayi , Li Fanglin , Zhang Ningjie , Zhong Yanjun
Published: October 2022

Ventilator-associated pneumonia (VAP) is the most common acquired infection in the intensive care unit. Recent studies showed that the critical COVID-19 patients with invasive mechanical ventilation have a high risk of developing VAP, which result in a worse outcome and an increasing economic burden. With the development of critical care medicine, the morbidity and mortality of VAP remains high. Especially since the outbreak of COVID-19, the healthcare system is facing unprecedented challenges. Therefore, many efforts have been made in effective prevention, early diagnosis, and early treatment of VAP. This review focuses on the treatment and prevention drugs of VAP in COVID-19 patients. In general, prevention is more important than treatment for VAP. Prevention of VAP is based on minimizing exposure to mechanical ventilation and encouraging early release. There is little difference in drug prophylaxis from non-COVID-19. In term of treatment of VAP, empirical antibiotics is the main treatment, special attention should be paid to the antimicrobial spectrum and duration of antibiotics because of the existence of drug-resistant bacteria. Further studies with well-designed and large sample size were needed to demonstrate the prevention and treatment of ventilator-associated pneumonia in COVID-19 based on the specificity of COVID-19.
Caenorhabditis elegans as a valuable model for the study of anthelmintic pharmacodynamics and drug-drug interactions: The case of ivermectin and eprinomectin
Authors: Suárez Gonzalo , Alcántara Ignacio , Salinas Gustavo
Published: October 2022

Caenorhabditis elegans is a free-living nematode that has been validated for anthelmintic drug screening. However, this model has not been used to address anthelmintic dose-response-time and drug-drug interactions through matrix array methodology. Eprinomectin (EPM) and Ivermectin (IVM) are macrocyclic lactones widely used as anthelmintics. Despite being very similar, EPM and IVM are combined in commercial formulations or mixed by farmers, under the assumption that the combination would increase their efficacy. However, there is no data reported on the pharmacological evaluation of the combination of both drugs. In this study, we assessed the pharmacodynamics and drug-drug interactions of these two anthelmintic drugs. Since the action of these drugs causes worm paralysis, we used an infrared motility assay to measure EPM and IVM effects on worm movement over time. The results showed that EPM was slightly more potent than IVM, that drug potency increased with drug time exposure, and that once paralyzed, worms did not recover. Different EPM/IVM concentration ratios were used and synergy and combination sensitivity scores were determined at different exposure times, applying Highest Single Agent (HSA), Loewe additivity, Bliss and Zero Interaction Potency (ZIP) models. The results clearly indicate that there is neither synergy nor antagonism between both macrocyclic lactones. This study shows that it is more relevant to prioritize the exposure time of each individual drug than to combine them to improve their effects. The results highlight the utility of C. elegans to address pharmacodynamics studies, particularly for drug-drug interactions. Models in vitro can be integrated to facilitate preclinical and clinical translational studies and help researchers to understand drug-drug interactions and achieve rational therapeutic regimes.
Sensing with sound enhanced acoustic metamaterials for fault diagnosis
Authors: Huang Shiqing , Lin Yubin , Tang Weijie , Deng Rongfeng , He Qingbo , Gu Fengshou , Ball Andrew D.
Published: October 2022

Cost-effective technology for condition monitoring and fault diagnosis is of practical importance for equipment maintenance and accident prevention. Among many fault diagnosis methods, sound-based sensing technology has been highly regarded due to its rich information, non-contact and flexible installation advantages. However, noise from the environment and other machines can interfere with sound signals, decreasing the effectiveness of acoustic sensors. In this paper, a novel trumpet-shaped acoustic metamaterial (TSAM) with a high enhancement of sound wave selection is proposed to detect rotating machinery faults. Firstly, a numerical calculation was carried out to test the characteristics of the proposed metamaterials model. Secondly, a finite element simulation was implemented on the model to verify the properties of the designed metamaterials. Finally, an experiment was conducted based on an electrical fan to prove the effectiveness of the designed metamaterials. The results of the signal-to-noise ratio show more than 25% improvement, consistently demonstrating the potentiality of the designed acoustic metamaterials for enhancing the weak fault signal in acoustic sensing and the capabilities of contributing to a more cost-effective fault diagnosis technology.
Fast quantum image encryption scheme based on multilayer short memory fractional order Lotka-Volterra system and dual-scale triangular map
Authors: Ma Yan , Yu Fang-Fang , Gong Li-Hua , Zou Wei-Ping
Published: October 2022

The Caputo fractional order Lotka-Volterra system is time-consuming in practical applications, since its starting point is fixed. To tackle this problem, a short memory fractional order Lotka-Volterra system (SMFrLVS) is proposed, where the chaotic attractor of the short memory fractional order Lotka-Volterra system is achieved by the predictor-corrector method. Then, a multilayer fractional order Lotka-Volterra system with short memory (MSMFrLVS) is introduced, whose chaotic behaviors are explored via Poincare sections and frequency power spectra. A quantum image encryption algorithm is proposed by combining MSMFrLVS with quantum dual-scale triangular map. A quantum circuit of the dual-scale triangular map is designed with ADDER-MOD2n. At the permutation stage, the plaintext image is transformed into quantum form with the generalized quantum image representation model. The resulting quantum image is divided into sub-blocks and scrambled by the quantum dual-scale triangular map. Subsequently, the intra and the inter permutation operations on bit-planes are realized by sorting pseudo-random sequence and by quantum Gray code, respectively. At the diffusion stage, the initial values of the MSMFrLVS are generated with a plaintext correlation mechanism. The ciphertext image can be acquired by carrying out three-level diffusion operations. It is demonstrated that the proposed quantum image encryption algorithm performs better than some typical image encryption algorithm in terms of security, robustness, computational complexity and encryption speed.
Sublethal effects and reproductive hormesis of emamectin benzoate on Plutella xylostella
Authors: Liu Kong-Xing , Guo Yong , Zhang Can-Xin , Xue Chao-Bin
Published: October 2022

The diamondback moth (DBM), Plutella xylostella L., is an important pest of cruciferous vegetables, and population control mainly depends on chemical pesticides. Emamectin benzoate is a highly effective insecticide used for controlling DBM. However, it is unknown how the sublethal effects of low concentration residues of emamectin benzoate on DBM. So the population development sublethal effects of emamectin benzoate, at LC5, LC10, and LC20 with concentrations of 0.014 mg/L, 0.024 mg/L and 0.047 mg/L, respectively, on adult DBM and their progeny were investigated in this study. The pupal weight, pupal period, female fecundity, and vitellin content of the F0 DBM generation increased significantly compared to the control. And the single female oviposition number of DBM was increased by 20.21% with LC20 treatment. The pupation rate, adult longevity and ovariole length of the treatment groups decreased significantly. The fecundity of DBM in the treatment groups increased, and this increased the population by a presumptive 13.84%. Treatment also led to the shortening of ovarioles and the reduction of egg hatching, and increased pupal weight in the F1 generation. We concluded that the effects of sublethal/low concentration emamectin benzoate on the different life stages of DBM were variable, and the reproductive hormesis on DBM adults were attractive findings.
Effects of cannabinoids on ligand-gated ion channels
Authors: Oz Murat , Yang Keun-Hang Susan , Mahgoub Mohamed Omer
Published: October 2022

Phytocannabinoids such as Δ9-tetrahydrocannabinol and cannabidiol, endocannabinoids such as N-arachidonoylethanolamine (anandamide) and 2-arachidonoylglycerol, and synthetic cannabinoids such as CP47,497 and JWH-018 constitute major groups of structurally diverse cannabinoids. Along with these cannabinoids, CB1 and CB2 cannabinoid receptors and enzymes involved in synthesis and degradation of endocannabinoids comprise the major components of the cannabinoid system. Although, cannabinoid receptors are known to be involved in anti-convulsant, anti-nociceptive, anti-psychotic, anti-emetic, and anti-oxidant effects of cannabinoids, in recent years, an increasing number of studies suggest that, at pharmacologically relevant concentrations, these compounds interact with several molecular targets including G-protein coupled receptors, ion channels, and enzymes in a cannabinoid-receptor independent manner. In this report, the direct actions of endo-, phyto-, and synthetic cannabinoids on the functional properties of ligand-gated ion channels and the plausible mechanisms mediating these effects were reviewed and discussed.
Insights into the regulation of wild soybean tolerance to salt-alkaline stress
Authors: Cai Xiaoxi , Jia Bowei , Sun Mingzhe , Sun Xiaoli
Published: October 2022

Soybean is an important grain and oil crop. In China, there is a great contradiction between soybean supply and demand. China has around 100 million ha of salt-alkaline soil, and at least 10 million could be potentially developed for cultivated land. Therefore, it is an effective way to improve soybean production by breeding salt-alkaline-tolerant soybean cultivars. Compared with wild soybean, cultivated soybean has lost a large number of important genes related to environmental adaptation during the long-term domestication and improvement process. Therefore, it is greatly important to identify the salt-alkaline tolerant genes in wild soybean, and investigate the molecular basis of wild soybean tolerance to salt-alkaline stress. In this review, we summarized the current research regarding the salt-alkaline stress response in wild soybean. The genes involved in the ion balance and ROS scavenging in wild soybean were summarized. Meanwhile, we also introduce key protein kinases and transcription factors that were reported to mediate the salt-alkaline stress response in wild soybean. The findings summarized here will facilitate the molecular breeding of salt-alkaline tolerant soybean cultivars.
Synchronous three-dimensional detection method for multiple parameters of wind fields based on vector principle
Authors: Yang Shenghui , Li Wenwei , Liu Xingxing , Wang Zimeng , Zheng Yongjun , Tan Yu , Feng Han
Published: October 2022

In the area of air-assisted spray, conventional detection of speed and direction of the wind fields for spray are separately conducted, and multiple kinds of sensors have to be laid on each coordinate axis during multidimensional detection. It limits the optimization of operation effect of sprayers based on wind-field distribution characteristics. This paper proposes a novel detection method to achieve synchronous measurement of wind speed and direction in three dimensions. Wind flow was considered as vectors and the sensing structure with a regular triangular pyramid shape supported by cantilever pieces was established. Strain gauges were utilized to detect the deformation in each direction by the wind thrust onto a ball before and after wind flow. Moreover, the calculation models of wind speed and direction were developed respectively based on the relationship of ‘strains-force-wind pressure-wind velocity’ and the principle of space operation of vectors, so multiple parameters of wind fields could be obtained simultaneously. Calibration was conducted based on a wind tunnel and the Testo 405i anemometers. The results showed that: the minimum relative error of wind-speed values was about 0.06%, while the maximum was about 10%. The average relative error of all the directions was less than 5%. Furthermore, the measurement of the wind among artificial tree canopies demonstrated that the proposed method could effectively measure both speed value and direction of the wind among canopies, and it also helped to find the wind distribution characteristics of the fan, SFG4-2R. The results highlighted both the reliability and the practical meaning of the proposed method, which could be a technical solution for measuring and evaluating wind-field characteristics of sprayers.
Predicting Fv/Fm and evaluating cotton drought tolerance using hyperspectral and 1D-CNN
Authors: Guo Congcong , Liu Liantao , Sun Hongchun , Wang Nan , Zhang Ke , Zhang Yongjiang , Zhu Jijie , Li Anchang , Bai Zhiying , Liu Xiaoqing , Dong Hezhong , Li Cundong
Published: October 2022

The chlorophyll fluorescence parameter Fv/Fm is significant in abiotic plant stress. Current acquisition methods must deal with the dark adaptation of plants, which cannot achieve rapid, real-time, and high-throughput measurements. However, increased inputs on different genotypes based on hyperspectral model recognition verified its capabilities of handling large and variable samples. Fv/Fm is a drought tolerance index reflecting the best drought tolerant cotton genotype. Therefore, Fv/Fm hyperspectral prediction of different cotton varieties, and drought tolerance evaluation, are worth exploring. In this study, 80 cotton varieties were studied. The hyperspectral cotton data were obtained during the flowering, boll setting, and boll opening stages under normal and drought stress conditions. Next, One-dimensional convolutional neural networks (1D-CNN), Categorical Boosting (CatBoost), Light Gradient Boosting Machines (LightBGM), eXtreme Gradient Boosting (XGBoost), Decision Trees (DT), Random Forests (RF), Gradient elevation decision trees (GBDT), Adaptive Boosting (AdaBoost), Extra Trees (ET), and K-Nearest Neighbors (KNN) were modeled with Fv/Fm. The Savitzky-Golay + 1D-CNN model had the best robustness and accuracy (RMSE = 0.016, MAE = 0.009, MAPE = 0.011). In addition, the Fv/Fm prediction drought tolerance coefficient and the manually measured drought tolerance coefficient were similar. Therefore, cotton varieties with different drought tolerance degrees can be monitored using hyperspectral full band technology to establish a 1D-CNN model. This technique is non-destructive, fast and accurate in assessing the drought status of cotton, which promotes smart-scale agriculture.
Global transcriptome and coexpression network analyses reveal cultivar-specific molecular signatures associated with different rooting depth responses to drought stress in potato
Authors: Qin Tianyuan , Ali Kazim , Wang Yihao , Dormatey Richard , Yao Panfeng , Bi Zhenzhen , Liu Yuhui , Sun Chao , Bai Jiangping
Published: October 2022

Potato is one of the most important vegetable crops worldwide. Its growth, development and ultimately yield is hindered by drought stress condition. Breeding and selection of deep-rooted and drought-tolerant potato varieties has become a prime approach for improving the yield and quality of potato (Solanum tuberosum L.) in arid and semiarid areas. A comprehensive understanding of root development-related genes has enabled scientists to formulate strategies to incorporate them into breeding to improve complex agronomic traits and provide opportunities for the development of stress tolerant germplasm. Root response to drought stress is an intricate process regulated through complex transcriptional regulatory network. To understand the rooting depth and molecular mechanism, regulating root response to drought stress in potato, transcriptome dynamics of roots at different stages of drought stress were analyzed in deep (C119) and shallow-rooted (C16) cultivars. Stage-specific expression was observed for a significant proportion of genes in each cultivar and it was inferred that as compared to C16 (shallow-rooted), approximately half of the genes were differentially expressed in deep-rooted cultivar (C119). In C16 and C119, 11 and 14 coexpressed gene modules, respectively, were significantly associated with physiological traits under drought stress. In a comparative analysis, some modules were different between the two cultivars and were associated with differential response to specific drought stress stage. Transcriptional regulatory networks were constructed, and key components determining rooting depth were identified. Through the results, we found that rooting depth (shallow vs deep) was largely determined by plant-type, cell wall organization or biogenesis, hemicellulose metabolic process, and polysaccharide metabolic process. In addition, candidate genes responding to drought stress were identified in deep (C119) and shallow (C16) rooted potato varieties. The results of this study will be a valuable source for further investigations on the role of candidate gene(s) that affect rooting depth and drought tolerance mechanisms in potato.
Response of Southeast Asian rice root architecture and anatomy phenotypes to drought stress
Authors: Siangliw Jonaliza L. , Thunnom Burin , Natividad Mignon A. , Quintana Marinell R. , Chebotarov Dmytro , McNally Kenneth L. , Lynch Jonathan P. , Brown Kathleen M. , Henry Amelia
Published: October 2022

Drought stress in Southeast Asia greatly affects rice production, and the rice root system plays a substantial role in avoiding drought stress. In this study, we examined the phenotypic and genetic correlations among root anatomical, morphological, and agronomic phenotypes over multiple field seasons. A set of >200 rice accessions from Southeast Asia (a subset of the 3000 Rice Genomes Project) was characterized with the aim to identify root morphological and anatomical phenotypes related to productivity under drought stress. Drought stress resulted in slight increases in the basal metaxylem and stele diameter of nodal roots. Although few direct correlations between root phenotypes and grain yield were identified, biomass was consistently positively correlated with crown root number and negatively correlated with stele diameter. The accessions with highest grain yield were characterized by higher crown root numbers and median metaxylem diameter and smaller stele diameter. Genome-wide association study (GWAS) revealed 162 and 210 significant SNPs associated with root phenotypes in the two seasons which resulted in identification of 59 candidate genes related to root development. The gene OsRSL3 was found in a QTL region for median metaxylem diameter. Four SNPs in OsRSL3 were found that caused amino acid changes and significantly associated with the root phenotype. Based on the haplotype analysis for median metaxylem diameter, the rice accessions studied were classified into five allele combinations in order to identify the most favorable haplotypes. The candidate genes and favorable haplotypes provide information useful for the genetic improvement of root phenotypes under drought stress.
Unusual patterns of hybridization involving two alpine Salvia species: Absence of both F1 and backcrossed hybrids
Authors: Chang Yuhang , Zhao Shengxuan , Xiao Hanwen , Liu Detuan , Huang Yanbo , Wei Yukun , Ma Yongpeng
Published: October 2022

Natural hybridization plays an important role in speciation; however, we still know little about the mechanisms underlying the early stages of hybrid speciation. Hybrid zones are commonly dominated by F1s, or backcrosses, which impedes further speciation. In the present study, morphological traits and double digest restriction‐site associated DNA sequencing (ddRAD-seq) data have been used to confirm natural hybridization betweenSalvia flavaandS.castanea, the first case of identification of natural hybridization using combined phenotypic and molecular evidence in the East Asian clade ofSalvia. We further examined several reproductive barriers in both pre-zygotic and post-zygotic reproductive stages to clarify the causes and consequences of the hybridization pattern. Our results revealed that reproductive isolation between the two species was strong despite the occurrence of hybridization. Interestingly, we found that most of the hybrids were likely to be F2s. This is a very unusual pattern of hybridization, and has rarely been reported before. The prevalence of geitonogamy within these self-compatible hybrids due to short distance foraging by pollinators might explain the origin of this unusual pattern. F2s can self-breed and develop further, therefore, we might be witnessing the early stages of hybrid speciation. Our study provides a new case for understanding the diversification of plants on the Qinghai-Tibet Plateau.
Estimation of the nitrogen content of potato plants based on morphological parameters and visible light vegetation indices
Authors: Fan Yiguang , Feng Haikuan , Jin Xiuliang , Yue Jibo , Liu Yang , Li Zhenhai , Feng Zhihang , Song Xiaoyu , Yang Guijun
Published: October 2022

Plant nitrogen content (PNC) is an important indicator to characterize the nitrogen nutrition status of crops, and quickly and efficiently obtaining the PNC information aids in fertilization management and decision-making in modern precision agriculture. This study aimed to explore the potential to improve the accuracy of estimating PNC during critical growth periods of potato by combining the visible light vegetation indices (VIs) and morphological parameters (MPs) obtained from an inexpensive UAV digital camera. First, the visible light VIs and three types of MPs, including the plant height (H), canopy coverage (CC) and canopy volume (CV), were extracted from digital images of the potato tuber formation stage (S1), tuber growth stage (S2), and starch accumulation stage (S3). Then, the correlations of VIs and MPs with the PNC were analyzed for each growth stage, and the performance of VIs and MPs in estimating PNC was explored. Finally, three methods, multiple linear regression (MLR), k-nearest neighbors, and random forest, were used to explore the effect of MPs on the estimation of potato PNC using VIs. The results showed that (i) the values of potato H and CC extracted based on UAV digital images were accurate, and the accuracy of the pre-growth stages was higher than that of the late growth stage. (ii) The estimation of potato PNC by visible light VIs was feasible, but the accuracy required further improvement. (iii) As the growing season progressed, the correlation between MPs and PNC gradually decreased, and it became more difficult to estimate the PNC. (iv) Compared with individual MP, multi-MPs can more accurately reflect the morphological structure of the crop and can further improve the accuracy of estimating PNC. (v) Visible light VIs combined with MPs improved the accuracy of estimating PNC, with the highest accuracy of the models constructed using the MLR method (S1: R2 = 0.79, RMSE=0.27, NRMSE=8.19%; S2:R2 = 0.80, RMSE=0.27, NRMSE=8.11%; S3: R2 = 0.76, RMSE=0.26, NRMSE=8.63%). The results showed that the combination of visible light VIs and morphological information obtained by a UAV digital camera could provide a feasible method for monitoring crop growth and plant nitrogen status.
Interannual characteristics and driving mechanism of CO2 fluxes during the growing season in an alpine wetland ecosystem at the southern foot of the Qilian Mountains
Authors: Zhu Jingbin , Li Hongqin , He Huidan , Zhang Fawei , Yang Yongsheng , Li Yingnian
Published: October 2022

The carbon process of the alpine ecosystem is complex and sensitive in the face of continuous global warming. However, the long-term dynamics of carbon budget and its driving mechanism of alpine ecosystem remain unclear. Using the eddy covariance (EC) technique—a fast and direct method of measuring carbon dioxide (CO2) fluxes, we analyzed the dynamics of CO2 fluxes and their driving mechanism in an alpine wetland in the northeastern Qinghai–Tibet Plateau (QTP) during the growing season (May–September) from 2004–2016. The results show that the monthly gross primary productivity (GPP) and ecosystem respiration (Re) showed a unimodal pattern, and the monthly net ecosystem CO2 exchange (NEE) showed a V-shaped trend. With the alpine wetland ecosystem being a carbon sink during the growing season, that is, a reservoir that absorbs more atmospheric carbon than it releases, the annual NEE, GPP, and Re reached −67.5 ± 10.2, 473.4 ± 19.1, and 405.9 ± 8.9 gCm-2, respectively. At the monthly scale, the classification and regression tree (CART) analysis revealed air temperature (Ta) to be the main determinant of variations in the monthly NEE and GPP. Soil temperature (Ts) largely determined the changes in the monthly Re. The linear regression analysis confirmed that thermal conditions (Ta, Ts) were crucial determinants of the dynamics of monthly CO2 fluxes during the growing season. At the interannual scale, the variations of CO2 fluxes were affected mainly by precipitation and thermal conditions. The annual GPP and Re were positively correlated with Ta and Ts, and were negatively correlated with precipitation. However, hydrothermal conditions (Ta, Ts, and precipitation) had no significant effect on annual NEE. Our results indicated that climate warming would be beneficial to the improvement of GPP and Re in the alpine wetland, while the increase of precipitation can weaken this effect.
Combined analysis of lipidomics and transcriptomics revealed the key pathways and genes of lipids in light-sensitive albino tea plant (Camellia sinensis cv. Baijiguan)
Authors: Zhou Zhe , Chen Mingjie , Wu Quanjin , Zeng Wen , Chen Zhidan , Sun Weijiang
Published: October 2022

Currently, the mechanism by which light-sensitive albino tea plants respond to light to regulate pigment synthesis has been only partially elucidated. However, few studies have focused on the role of lipid metabolism in the whitening of tea leaves. Therefore, in our study, the leaves of the Baijiguan (BJG) tea tree under shade and light restoration conditions were analyzed by a combination of lipidomics and transcriptomics. The leaf color of BJG was regulated by light intensity and responded to light changes in light by altering the contents and proportions of lipids. According to the correlation analysis, we found three key lipid components that were significantly associated with the chlorophyll SPAD value, namely, MGDG (36:6), DGDG (36:6) and DGDG (34:3). Further weighted gene coexpression network analysis (WGCNA) showed that HY5 TF and GLIP genes may be hub genes involved lipid regulation in albino tea leaves. Our results lay a foundation for further exploration of the color changes in albino tea leaves.
MbHY5-MbYSL7
mediates chlorophyll synthesis and iron transport under iron deficiency in Malus baccata
Authors: Sun Yaqiang , Luo Jiawei , Feng Peien , Yang Fan , Liu Yunxiao , Liang Jiakai , Wang Hanyu , Zou Yangjun , Ma Fengwang , Zhao Tao
Published: October 2022

Iron (Fe) plays an important role in cellular respiration and catalytic reactions of metalloproteins in plants and animals. Plants maintain iron homeostasis through absorption, translocation, storage, and compartmentalization of iron via a cooperative regulative network. Here, we showed different physiological characteristics in the leaves and roots of Malus baccata under Fe sufficiency and Fe deficiency conditions and propose that MbHY5 (elongated hypocotyl 5), an important transcription factor for its function in photomorphogenesis, participated in Fe deficiency response in both the leaves and roots of M. baccata. The gene co-expression network showed that MbHY5 was involved in the regulation of chlorophyll synthesis and Fe transport pathway under Fe-limiting conditions. Specifically, we found that Fe deficiency induced the expression of MbYSL7 in root, which was positively regulated by MbHY5. Overexpressing or silencing MbYSL7 influenced the expression of MbHY5 in M. baccata.
Impacts of corn intercropping with soybean, peanut and millet through different planting patterns on population dynamics and community diversity of insects under fertilizer reduction
Authors: Li Likun , Duan Ruichuan , Li Runzhao , Zou Yan , Liu Jiawen , Chen Fajun , Xing Guangnan
Published: October 2022

Corn is one of the key grain crops in China and the excessive use of chemical fertilizers and pesticides seriously damages the ecological environment in fields. To explore a more scientific and reasonable way to plant corn and simultaneously reduce the overuse of chemical fertilizers and pesticides, the impact of corn intercropping with soybean, peanut, and millet, respectively, through five planting patterns, including three intercropping patterns (2 corn rows to 2, 3 and 4 rows of soybean/peanut or 2, 4 and 6 millet rows, respectively) and two monoculture patterns of corn and soybean, peanut or millet under normal (600 kg/ha) and reduced (375 kg/ha) levels of NPK (N:P2O5:K2O = 15:15:15) fertilization on the population abundance and community diversity of insects, leaf nutrients, and induced plant hormones jasmonic acid (JA) and salicylic acid (SA) was studied in 2018 and 2019. The results showed that the insect community indexes of the species number (S), the diversity index (H), and the uniformity index (E) generally increased under intercropping and were significantly higher than those under corn monoculture. The prevalence of Asian corn borer (Ostrinia furnacalis) on the intercropping corn plants decreased by based on the average of seven surveys per year for each treatment 2.9 to 17 heads per 30 plants compared with that on the monoculture corn plants. The number of natural enemy insect species on corn plants under intercropping was significantly higher than that under corn monoculture. That is, intercropping may decrease the population of Asian corn borers by increasing S, H, E, and natural enemy insect species (NEI). Moreover, intercropping type and fertilizer level significantly affected corn leaf nutrient contents. Compared with the normal fertilizer level, fertilizer reduction significantly reduced the foliar contents of amino acids, soluble protein, and soluble sugar in corn plants. In addition, corn–soybean and corn–peanut intercropping significantly increased the three nutrient contents in corn leaves compared with corn monoculture. In terms of corn nutrients, intercropping could compensate for the effects of fertilizer reduction. The foliar content of JA in corn–soybean intercropping was significantly higher than in corn monoculture. Under corn–soybean and corn–peanut intercropping, SA was significantly lower than under corn monoculture. Overall, intercropping, not fertilizer reduction, can significantly increase insect community diversity while reducing the population abundances of the key insect pest species on corn plants. Intercropping reduced the SA content, increased amino acids and thus reduced the susceptibility of corn to the pest insects.
Epichloë endophytes improved Leymus chinensis tolerance to both neutral and alkali salt stresses
Authors: Yin Lijia , Wei Maoying , Wu Guanghong , Ren Anzhi
Published: October 2022

Symbiotic relationships with microbes may influence how plants respond to environmental change. In the present study, we tested the hypothesis that symbiosis with the endophytes promoted salt tolerance of the native grass. In the field pot experiment we compared the performance of endophyte-infected (E+) and endophyte-uninfected (E−) Leymus chinensis, a dominant species native to the Inner Mongolia steppe, under altered neutral and alkaline salt stresses. The results showed that under both neutral and alkaline salt stresses, endophyte infection significantly increased plant height, leaf length and fibrous root biomass. Under neutral salt stress, endophyte infection decreased Na+ content and Na+/K+ ratio (p=0.066) in the leaf sheath while increased Ca2+ and Mg2+ content in the rhizome. Under alkali salt stress, endophyte infection tended to increase K+ content in the fibrous root, enhance Mg2+ content in the fibrous root while reduce Na+/K+ ratio in the leaf blade in the 100 mmol/L alkali salt treatment. Although endophyte-infected L. chinensis cannot accumulate Na+ high enough to be halophytes, the observed growth promotion and stress tolerance give endophyte/plant associations the potential to be a model for endophyte-assisted phytoremediation of saline-alkaline soils.
ZeMYB9 regulates cyanidin synthesis by activating the expression of flavonoid 3′-hydroxylase gene in Zinnia elegans
Authors: Qian Jieyu , Jiang Lingli , Qing Hongsheng , Chen Jiahong , Wan Ziyun , Xu Menghan , Fu Jianxin , Zhang Chao
Published: October 2022

Petal color in Zinnia elegans is characterized mainly by anthocyanin accumulation. The difference in the content of anthocyanins, especially cyanidins, affects petal coloration in Z. elegans, but the underlying regulatory mechanism remains elusive. Here, we report one R2R3-MYB transcription factor from subgroup 6, ZeMYB9, acting as a positive regulator of anthocyanin accumulation in Z. elegans. Up-regulated expression of ZeMYB9 and flavonoid 3′-hydroxylase gene (ZeF3’H) was detected in the cultivar with higher cyanidin content. ZeMYB9 could specifically activate the promoter of ZeF3’H, and over-expression of ZeMYB9 induces much greater anthocyanin accumulation and higher expression level of anthocyanin biosynthetic genes in both petunia and tobacco. And then, ZeMYB9 was demonstrated to interact with ZeGL3, a bHLH transcription factor belonging to IIIf subgroup. Promoter activity of ZeF3’H was significantly promoted by co-expressing ZeMYB9 and ZeGL3 compared with expressing ZeMYB9 alone. Moreover, transient co-expression of ZeMYB9 and ZeGL3 induced anthocyanin accumulation in tobacco leaves. Our results suggest that ZeMYB9 could enhance cyanidin synthesis and regulate petal color in Z. elegans though activating the expression of ZeF3’H, by itself or interacting with ZeGL3.
The cracking of Scots pine (Pinus sylvestris) cones
Authors: Horstmann Martin , Buchheit Hannah , Speck Thomas , Poppinga Simon
Published: October 2022

Pine cones show functionally highly resilient, hygroscopically actuated opening and closing movements, which are repeatable and function even in millions of years old, coalified cones. Although the functional morphology and biomechanics behind the individual seed scale motions are well understood, the initial opening of the cone, which is often accompanied by an audible cracking noise, is not. We therefore investigated the initial opening events of mature fresh cones of Scots pine (Pinus sylvestris) and their subsequent motion patterns. Using high-speed and time lapse videography, 3D digital image correlation techniques, force measurements, thermographic and chemical-rheological resin analyses, we are able to draw a holistic picture of the initial opening process involving the rupture of resin seals and very fast seed scale motion in the millisecond regime. The rapid cone opening was not accompanied by immediate seed release in our experiments and, therefore, cannot be assigned to ballistochory. As the involved passive hydraulic-elastic processes in cracking are very fine-tuned, we hypothesize that they are under tight mechanical-structural control to ensure an ecologically optimized seed release upon environmental conditions suitable for wind dispersal. In this context, we propose an interplay of humidity and temperature to be the external “drivers” for the initial cone opening, in which resin works as a crucial chemical-mechanical latch system.
Orchard microclimate, tree water uptake and sweet cherry fruit quality under protected cropping
Authors: Stone Cameron Hugh , Close Dugald C. , Bound Sally A. , Corkrey Ross
Published: October 2022

Protected cropping systems (PCS) de-risk adverse climatic effects in intensive horticultural production but alter the growing environment. The objectives of this study were to investigate the effects of modern, commercial-scale PCS on sweet cherry orchard microclimate, tree water uptake and fruit quality. Sap flow sensors and weather stations were positioned at four locations under a 21 ha PCS at varying elevations (125, 114, 111, 102 m above sea level) and distances from the block boundary (105, 75, 60 or 50 m, referred to hereafter as Locations 1 to 4, respectively). Generalised additive models (GAMs) were used to predict the effect of individual climate parameters (temperature, relative humidity, solar radiation and wind speed) on tree sap flow at each of the four locations. Average and maximum temperatures and average minimum relative humidity (RH) were higher (15.9°C, 26.1°C and 49.0%) at locations with higher elevations and located further from the PCS boundary (locations 1 and 2) in contrast to locations at lower elevations and closer proximity to the PCS boundary (locations 3 and 4) (15.4°C, 24.6°C and 48.1%). Predicted sap flow was strongly correlated (r2 = 0.92) with time across the four locations under the PCS. GAMS modelling indicated that the hourly water uptake by trees within close proximity to the block boundary (locations 3 and 4) responded with greater intensity to increases in temperature and reductions in relative humidity, taking up on average 0.15 L h-1 (at temperatures >30°C) and 0.08 L h-1 (at RH<50%), respectively, in contrast to trees further under the PCS (locations 1 and 2) where average tree water uptake was 0.08 and 0.04 L h-1 at temperatures >30°C and RH<50%, respectively. Highest average predicted hourly tree sap flow was associated with high wind speeds (0.67 L h-1) and low relative humidity levels (0.61 L h-1). Fruit harvested from locations further from the PCS boundary had significantly higher dry matter content (18.2%), total soluble solids (17.8%) and compression firmness (311.3 g mm-1) in contrast to fruit closer to the PCS boundaries (16.1%, 15.7% and 258.3 g mm-1). This study provides greater understanding of the effects of PCS on microclimate and consequences for tree water uptake and fruit quality.