bluuebunny/crossref_metadata_2025 huggingface dataset:
Comprehensive Framework for Describing Interactive Sound Installations: Highlighting Trends through a Systematic Review
Authors: Fraisse Valérian , Wanderley Marcelo M. , Guastavino Catherine
Published: April 2021

We report on a conceptual framework for describing interactive sound installations from three complementary perspectives: artistic intention, interaction and system design. Its elaboration was informed by a systematic review of 181 peer-reviewed publications retrieved from the Scopus database, which describe 195 interactive sound installations. The resulting taxonomy is based on the comparison of the different facets of the installations reported in the literature and on existing frameworks, and it was used to characterize all publications. A visualization tool was developed to explore the different facets and identify trends and gaps in the literature. The main findings are presented in terms of bibliometric analysis, and from the three perspectives considered. Various trends were derived from the database, among which we found that interactive sound installations are of prominent interest in the field of computer science. Furthermore, most installations described in the corpus consist of prototypes or belong to exhibitions, output two sensory modalities and include three or more sound sources. Beyond the trends, this review highlights a wide range of practices and a great variety of approaches to the design of interactive sound installations.
XRD Evaluation of Wurtzite Phase in MBE Grown Self-Catalyzed GaP Nanowires
Authors: Koval Olga Yu. , Fedorov Vladimir V. , Bolshakov Alexey D. , Eliseev Igor E. , Fedina Sergey V. , Sapunov Georgiy A. , Udovenko Stanislav A. , Dvoretckaia Liliia N. , Kirilenko Demid A. , Burkovsky Roman G. , Mukhin Ivan S.
Published: April 2021

Control and analysis of the crystal phase in semiconductor nanowires are of high importance due to the new possibilities for strain and band gap engineering for advanced nanoelectronic and nanophotonic devices. In this letter, we report the growth of the self-catalyzed GaP nanowires with a high concentration of wurtzite phase by molecular beam epitaxy on Si (111) and investigate their crystallinity. Varying the growth temperature and V/III flux ratio, we obtained wurtzite polytype segments with thicknesses in the range from several tens to 500 nm, which demonstrates the high potential of the phase bandgap engineering with highly crystalline self-catalyzed phosphide nanowires. The formation of rotational twins and wurtzite polymorph in vertical nanowires was observed through complex approach based on transmission electron microscopy, powder X-ray diffraction, and reciprocal space mapping. The phase composition, volume fraction of the crystalline phases, and wurtzite GaP lattice parameters were analyzed for the nanowires detached from the substrate. It is shown that the wurtzite phase formation occurs only in the vertically-oriented nanowires during vapor-liquid-solid growth, while the wurtzite phase is absent in GaP islands parasitically grown via the vapor-solid mechanism. The proposed approach can be used for the quantitative evaluation of the mean volume fraction of polytypic phase segments in heterostructured nanowires that are highly desirable for the optimization of growth technologies.
Carbon Nanomaterials: Synthesis, Functionalization and Sensing Applications
Authors: Speranza Giorgio
Published: April 2021

Recent advances in nanomaterial design and synthesis has resulted in robust sensing systems that display superior analytical performance. The use of nanomaterials within sensors has accelerated new routes and opportunities for the detection of analytes or target molecules. Among others, carbon-based sensors have reported biocompatibility, better sensitivity, better selectivity and lower limits of detection to reveal a wide range of organic and inorganic molecules. Carbon nanomaterials are among the most extensively studied materials because of their unique properties spanning from the high specific surface area, high carrier mobility, high electrical conductivity, flexibility, and optical transparency fostering their use in sensing applications. In this paper, a comprehensive review has been made to cover recent developments in the field of carbon-based nanomaterials for sensing applications. The review describes nanomaterials like fullerenes, carbon onions, carbon quantum dots, nanodiamonds, carbon nanotubes, and graphene. Synthesis of these nanostructures has been discussed along with their functionalization methods. The recent application of all these nanomaterials in sensing applications has been highlighted for the principal applicative field and the future prospects and possibilities have been outlined.
Kinetic Modeling for Photo-Assisted Penicillin G Degradation of (Mn0.5Zn0.5)[CdxFe2-x]O4 (x ≤ 0.05) Nanospinel Ferrites
Authors: Alagha Omar , Ouerfelli Noureddine , Kochkar Hafedh , Almessiere Munirah A. , Slimani Yassine , Manikandan Ayyar , Baykal Abdulhadi , Mostafa Ahmed , Zubair Mukarram , Barghouthi Mohammad H.
Published: April 2021

Penicillin G is an old and widely used antibiotic. Its persistence in the environment started to appear in many environmental samples and food chains. The removal of these emerging pollutants has been a challenging task for scientists in the last decades. The photocatalytic properties of Cd2+ doped Manganese- Zinc NSFs with chemical formula (Mn0.5Zn0.5)[CdxFe2−x]O4 (0.0 ≤ x ≤ 0.05) NSFs are herein evaluated. The Manganese- Zinc N.S.F.s nanomaterials were deeply characterized, utilizing UV-Vis (reflectance) spectroscopy, X-ray diffraction, N2 adsorption isotherm measurements, and S.E.M., SEM-EDX mapping, and T.E.M. The Kinetic model for the photodegradation of penicillin G (as a model molecule) is investigated using visible light as a source of energy. The kinetic study shows that our results fit well with the modified pseudo-first-order model. The Pen G degradation are 88.73%, 66.65%, 44.70%, 37.62% and 24.68% for x = 0.5, 0.4, 0.3, 0.2 and 0.1, respectively, against 14.68% for the free Cd spinel sample. The pseudo-rate constant is bandgap dependent. From the intra-diffusion rate constant (Kd), we developed an intra-diffusion time (τ) model, which decreases exponentially as a function of (x) and mainly shows the existence of three different domains versus cadmium coordination in spinel ferrite samples. Hence, Cadmium’s presence generates spontaneous polarization with a strong opportunity to monitor the charge separation and then open the route to a new generation of “assisted” photocatalysts under visible light.
Peculiarities of Thermodynamic Behaviors of Xenon Adsorption on the Activated Carbon Prepared from Silicon Carbide
Authors: Men’shchikov Ilya , Shkolin Andrey , Khozina Elena , Fomkin Anatoly
Published: April 2021

An activated carbon prepared from silicon carbide by thermochemical synthesis and designated as SiC-AC was studied as an adsorbent for xenon. The examination of textural properties of the SiC-AC adsorbent by nitrogen vapor adsorption measurements at 77 K, powder X-ray diffraction, and scanning electron microscopy revealed a relatively homogeneous microporous structure, a low content of heteroatoms, and an absence of evident transport macropores. The study of xenon adsorption and adsorption-induced deformation of the Si-AC adsorbent over the temperature range of 178 to 393 K and pressures up to 6 MPa disclosed the contraction of the material up to −0.01%, followed by its expansion up to 0.49%. The data on temperature-induced deformation of Si-AC measured within the 260 to 575 K range was approximated by a linear function with a thermal expansion factor of (3 ± 0.15) × 10−6 K−1. These findings of the SiC-AC non-inertness taken together with the non-ideality of an equilibrium xenon gaseous phase allowed us to make accurate calculations of the differential isosteric heats of adsorption, entropy, enthalpy, and heat capacity of the Xe/SiC-AC adsorption system from the experimental adsorption data over the temperature range from 178 to 393 K and pressures up to 6 MPa. The variations in the thermodynamic state functions of the Xe/SiC-AC adsorption system with temperature and amount of adsorbed Xe were attributed to the transitions in the state of the adsorbate in the micropores of SiC-AC from the bound state near the high-energy adsorption sites to the molecular associates.
Hydrothermal Synthesis of Various Magnetic Properties of Controlled Micro/Nanostructured Powders and Films of Rare-Earth Iron Garnet
Authors: Tsidaeva Natalia , Nakusov Ahsarbek , Khaimanov Spartak , Wang Wei
Published: April 2021

In this study, the synthesis and magnetic properties of the rare-earth iron garnets Sm3Fe5O12, Pr3Fe5O12, and Er3Fe5O12 (in the form of powders and thin films) are reported. According to the composition, shape, and size of particles, the optimal precipitant for the synthesis of Sm3Fe5O12, Pr3Fe5O12, and Er3Fe5O12 films is an aqueous solution. The parameters for the synthesis of powders and films of the rare-earth iron garnets with micro- and nano-particles have been investigated and selected. The magnetic properties of these materials were studied; field dependencies of the magnetic moment (hysteresis loops) of nanostructured powders of iron garnets of samarium, praseodymium, and erbium in the range of +20 kOe to −20 kOe were obtained. The structural features of the Al2O3 substrate on which the films were formed are also shown.
Hydrogen Uptake and Release in Carbon Nanotube Electrocatalysts
Authors: Lobo Rui , Ribeiro Jorge , Inok Filipe
Published: April 2021

The recent technique of molecular beam-thermal desorption spectrometry was used here for monitoring hydrogen uptake and release from carbon nanotube networks, after electrochemical hydrogen uptake. This way, an accurate determination of the hydrogen mass absorbed in electrodes made from those assemblies can be achieved by significantly improving the signal-to-noise ratio. The hydrogen desorption mass spectra account for the enhanced surface capability for hydrogen adsorption in the electrodes and enable a comparison with the performance of a palladium electrode in similar conditions. A comparative study involving different carbon nanotube electrodes, in similar hydrogen uptake/desorption conditions, clearly confirmed the expectations about their enhanced hydrogen storage capacity and points to the great potential of carbon nanotube assemblies in replacing the heavier metal alloys as electrocatalysts.
In Situ Local Oxidation of SnO Induced by Laser Irradiation: A Stability Study
Authors: Vázquez-López Antonio , Maestre David , Ramírez-Castellanos Julio , Cremades Ana
Published: April 2021

In this work, semiconductor tin oxide (II) (SnO) nanoparticles and plates were synthesized at room conditions via a hydrolysis procedure. X-ray diffraction (XRD) and transmission electron microscopy (TEM) confirmed the high crystallinity of the as-synthesized romarchite SnO nanoparticles with dimensions ranging from 5 to 16 nm. The stability of the initial SnO and the controlled oxidation to SnO2 was studied based on either thermal treatments or controlled laser irradiation using a UV and a red laser in a confocal microscope. Thermal treatments induced the oxidation from SnO to SnO2 without formation of intermediate SnOx, as confirmed by thermodiffraction measurements, while by using UV or red laser irradiation the transition from SnO to SnO2 was controlled, assisted by formation of intermediate Sn3O4, as confirmed by Raman spectroscopy. Photoluminescence and Raman spectroscopy as a function of the laser excitation source, the laser power density, and the irradiation duration were analyzed in order to gain insights in the formation of SnO2 from SnO. Finally, a tailored spatial SnO/SnO2 micropatterning was achieved by controlled laser irradiation with potential applicability in optoelectronics and sensing devices.
Stable Coloured Micrometric Films from Highly Concentrated Nano-Silver Sols: The Role of the Stabilizing Agents
Authors: Pargoletti Eleonora , Ortenzi Marco Aldo , Cappelletti Giuseppe
Published: April 2021

The synthesis of highly concentrated aqueous silver nanoparticles (NPs), exploiting different types of polymeric stabilizing agents, has been extensively investigated, especially for the stabilization of spherical yellow nanoparticles. In this context, here, a successful and easy wet chemical method was adopted to synthesize concentrated primary colored (yellow, red, blue and green) sols. The influence of polyvinylpyrrolidone (PVP) and polyvinyl alcohol (PVA) in affecting the final stability was finely investigating via UV/Vis spectroscopy, dynamic light scattering, TEM and colorimetric analysis. The next step consisted on the deposition of obtained sols onto a crown-treated polyethylene terephthalate (PET) support to obtain transparent colored micrometric homogeneous films. The fabricated PVP-based Ag films were revealed to be outstandingly UV-stable, contrarily to PVA-based films, probably due to the degradation of the polymer itself. Indeed, after UV aging tests, the PVA macromolecules could be broken and chemically modified (demonstrated by FT-IR analyses). This resulted in there being insufficient macromolecules to efficiently cover the surface of the nanoparticles, meaning that the nanoparticles tended to aggregate with each other, destabilizing the system itself. Hence, the obtained colored films described herein could represent a promising tool for different applications, from color shifting to optoelectronic devices.
Edge-Trimmed Nanogaps in 2D Materials for Robust, Scalable, and Tunable Lateral Tunnel Junctions
Authors: Nguyen Hai-Thai , Nguyen Yen , Su Yen-Hsun , Hsieh Ya-Ping , Hofmann Mario
Published: April 2021

Lateral tunnel junctions are fundamental building blocks for molecular electronics and novel sensors, but current fabrication approaches achieve device yields below 10%, which limits their appeal for circuit integration and large-scale application. We here demonstrate a new approach to reliably form nanometer-sized gaps between electrodes with high precision and unprecedented control. This advance in nanogap production is enabled by the unique properties of 2D materials-based contacts. The large difference in reactivity of 2D materials’ edges compared to their basal plane results in a sequential removal of atoms from the contact perimeter. The resulting trimming of exposed graphene edges in a remote hydrogen plasma proceeds at speeds of less than 1 nm per minute, permitting accurate control of the nanogap dimension through the etching process. Carrier transport measurements reveal the high quality of the nanogap, thus-produced tunnel junctions with a 97% yield rate, which represents a tenfold increase in productivity compared to previous reports. Moreover, 70% of tunnel junctions fall within a nanogap range of only 0.5 nm, representing an unprecedented uniformity in dimension. The presented edge-trimming approach enables the conformal narrowing of gaps and produces novel one-dimensional nano-trench geometries that can sustain larger tunneling currents than conventional 0D nano-junctions. Finally, the potential of our approach for future electronics was demonstrated by the realization of an atom-based memory.
The Role of the Molecular Hydrogen Formation in the Process of Metal-Ion Reduction on Multicrystalline Silicon in a Hydrofluoric Acid Matrix
Authors: Schönekerl Stefan , Acker Jörg
Published: April 2021

Metal deposition on silicon in hydrofluoric acid (HF) solutions is a well-established process for the surface patterning of silicon. The reactions behind this process, especially the formation or the absence of molecular hydrogen (H2), are controversially discussed in the literature. In this study, several batch experiments with Ag+, Cu2+, AuCl4− and PtCl62− in HF matrix and multicrystalline silicon were performed. The stoichiometric amounts of the metal depositions, the silicon dissolution and the molecular hydrogen formation were determined analytically. Based on these data and theoretical considerations of the valence transfer, four reasons for the formation of H2 could be identified. First, H2 is generated in a consecutive reaction after a monovalent hole transfer (h+) to a Si–Si bond. Second, H2 is produced due to a monovalent hole transfer to the Si–H bonds. Third, H2 occurs if Si–Si back bonds of the hydrogen-terminated silicon are attacked by Cu2+ reduction resulting in the intermediate species HSiF3, which is further degraded to H2 and SiF62−. The fourth H2-forming reaction reduces oxonium ions (H3O+) on the silver/, copper/ and gold/silicon contacts via monovalent hole transfer to silicon. In the case of (cumulative) even-numbered valence transfers to silicon, no H2 is produced. The formation of H2 also fails to appear if the equilibrium potential of the 2H3O+/H2 half-cell does not reach the energetic level of the valence bands of the bulk or hydrogen-terminated silicon. Non-hydrogen-forming reactions in silver, copper and gold deposition always occur with at least one H2-forming process. The PtCl62− reduction to Pt proceeds exclusively via even-numbered valence transfers to silicon. This also applies to the reaction of H3O+ at the platinum/silicon contact. Consequently, no H2 is formed during platinum deposition.
Enhanced Heat-Electric Conversion via Photonic-Assisted Radiative Cooling
Authors: Lee Jeng-Yi , Wang Chih-Ming , Chi Chieh-Lun , Wu Sheng-Rui , Lin Ya-Xun , Wei Mao-Kuo , Lin Chu-Hsuan
Published: April 2021

In this paper, an inorganic polymer composite film is proposed as an effective radiative cooling device. The inherent absorption is enhanced by choosing an appropriately sized SiO2 microsphere with a diameter of 6 μm. The overall absorption at the transparent window of the atmosphere is higher than 90%, as the concentration of SiO2–PMMA composite is 35 wt%. As a result, an effective radiative device is made by a spin coating process. Moreover, the device is stacked on the cold side of a thermoelectric generator chip. It is found that the temperature gradient can be increased via the effective radiative cooling process. An enhanced Seebeck effect is observed, and the corresponding output current can be enhanced 1.67-fold via the photonic-assisted radiative cooling.
A Label-Free DNA-Immunosensor Based on Aminated rGO Electrode for the Quantification of DNA Methylation
Authors: Safarzadeh Mina , Suhail Ahmed , Sethi Jagriti , Sattar Anas , Jenkins David , Pan Genhua
Published: April 2021

In this work, we developed a sandwich DNA-immunosensor for quantification of the methylated tumour suppressor gene O-6-methylguanine-DNA methyltransferase (MGMT), which is a potential biomarker for brain tumours and breast cancer. The biosensor is based on aminated reduced graphene oxide electrode, which is achieved by ammonium hydroxide chemisorption and anti-5-methylcytosine (anti-5mC) as a methylation bioreceptor. The target single-strand (ss) MGMT oligonucleotide is first recognised by its hybridisation with complementary DNA to form double-stranded (ds) MGMT, which is then captured by anti-5mC on the electrode surface due to the presence of methylation. Raman spectroscopy, X-ray photoelectron spectroscopy (XPS) and Scanning electron microscopy (SEM) techniques were used to characterise the electrode surface. Cyclic voltammetry (CV) and differential pulse voltammetry (DPV) techniques were used for electrochemical measurements. Under optimised conditions, the proposed biosensor is able to quantify a linear range of concentrations of the MGMT gene from 50 fM to 100 pM with a limit of detection (LOD) of 12 fM. The sandwich design facilitates the simultaneous recognition and quantification of DNA methylation, and the amination significantly improves the sensitivity of the biosensor. This biosensor is label-, bisulfite- and PCR-free and has a simple design for cost-efficient production. It can also be tailor-made to detect other methylated genes, which makes it a promising detection platform for DNA methylation-related disease diagnosis and prognosis.
Maternal Quercetin Consumption during Pregnancy May Help Regulate Total Cholesterol/HDL-Cholesterol Ratio without Effect on Cholesterol Levels in Male Progeny Consuming High-Fat Diet
Authors: Takashima Masakatsu , Tanaka Wataru , Matsuyama Hiroki , Tajiri Hayato , Sakakibara Hiroyuki
Published: April 2021

Quercetin has been shown to have anti-obesity effects, but it is unknown whether these effects can be transmitted from mothers to their progeny. In this study, we investigated whether maternal quercetin consumption during pregnancy has a protective effect on high-fat diet–induced hyper lipid levels and overweight in progeny. Female mice consumed a control diet or a diet containing 1.0% quercetin during breeding. The male progeny were then divided into four groups that were (1) sacrificed at postnatal day 3; (2) born to dams fed the control diet and also fed the control diet (C-C), (3) born to dams fed the control diet and then fed a 30% high-fat diet (C-HF), or (4) born to dams fed the Q-diet and then fed the HF diet (Q-HF). Maternal consumption of quercetin did not affect body weight or blood lipid parameters in either dams or neonates at postnatal day 3. After 13 weeks, the Q-HF group exhibited greater body and liver weights, and higher blood cholesterol levels than the C-HF group. However, the total cholesterol/ high density lipoprotein (HDL)-cholesterol ratios in the Q-HF and C-C groups remained similar. In conclusion, maternal quercetin consumption does not appear to protect the next generation from high-fat diet–induced hyper cholesterol level in the blood and liver, and consequently overweight, but may help regulate the total cholesterol/HDL-cholesterol ratio.
Short-Chain Fatty Acids, Maternal Microbiota and Metabolism in Pregnancy
Authors: Ziętek Maciej , Celewicz Zbigniew , Szczuko Małgorzata
Published: April 2021

Short-chain fatty acids (SCFAs), as products of intestinal bacterial metabolism, are particularly relevant in the diagnosis of intestinal dysbiosis. The most common studies of microbiome metabolites include butyric acid, propionic acid and acetic acid, which occur in varying proportions depending on diet, age, coexisting disease and other factors. During pregnancy, metabolic changes related to the protection of energy homeostasis are of fundamental importance for the developing fetus, its future metabolic fate and the mother’s health. SCFAs act as signaling molecules that regulate the body’s energy balance through G-protein receptors. GPR41 receptors affect metabolism through the microflora, while GPR43 receptors are recognized as a molecular link between diet, microflora, gastrointestinal tract, immunity and the inflammatory response. The possible mechanism by which the gut microflora may contribute to fat storage, as well as the occurrence of gestational insulin resistance, is blocking the expression of the fasting-induced adipose factor. SCFAs, in particular propionic acid via GPR, determine the development and metabolic programming of the fetus in pregnant women. The mechanisms regulating lipid metabolism during pregnancy are similar to those found in obese people and those with impaired microbiome and its metabolites. The implications of SCFAs and metabolic disorders during pregnancy are therefore critical to maternal health and neonatal development. In this review paper, we summarize the current knowledge about SCFAs, their potential impact and possible mechanisms of action in relation to maternal metabolism during pregnancy. Therefore, they constitute a contemporary challenge to practical nutritional therapy. Material and methods: The PubMed database were searched for “pregnancy”, “lipids”, “SCFA” in conjunction with “diabetes”, “hypertension”, and “microbiota”, and searches were limited to work published for a period not exceeding 20 years in the past. Out of 2927 publication items, 2778 papers were excluded from the analysis, due to being unrelated to the main topic, conference summaries and/or articles written in a language other than English, while the remaining 126 publications were included in the analysis.
Chikungunya and Zika Viruses: Co-Circulation and the Interplay between Viral Proteins and Host Factors
Authors: Wichit Sineewanlaya , Gumpangseth Nuttamonpat , Hamel Rodolphe , Yainoy Sakda , Arikit Siwaret , Punsawad Chuchard , Missé Dorothée
Published: April 2021

Chikungunya and Zika viruses, both transmitted by mosquito vectors, have globally re-emerged over for the last 60 years and resulted in crucial social and economic concerns. Presently, there is no specific antiviral agent or vaccine against these debilitating viruses. Understanding viral–host interactions is needed to develop targeted therapeutics. However, there is presently limited information in this area. In this review, we start with the updated virology and replication cycle of each virus. Transmission by similar mosquito vectors, frequent co-circulation, and occurrence of co-infection are summarized. Finally, the targeted host proteins/factors used by the viruses are discussed. There is an urgent need to better understand the virus–host interactions that will facilitate antiviral drug development and thus reduce the global burden of infections caused by arboviruses.
COVID-19: Measles and Antibiotic Resistance Are a Matter of Concern
Authors: Di Guardo Giovanni
Published: April 2021

An interesting Perspective article recently published in the New England Journal of Medicine offers an insightful overview on the benefits provided by the mass vaccination of children against Severe Acute Respiratory Syndrome CoronaVirus-2 (SARS-CoV-2), the betacoronavirus responsible for the dramatic CoronaVirus Disease-2019 (COVID-19) pandemic [...]
Genetic Pathogenesis of Inflammation-Associated Cancers in Digestive Organs
Authors: Nakanishi Risa , Shimizu Takahiro , Kumagai Ken , Takai Atsushi , Marusawa Hiroyuki
Published: April 2021

Epidemiological, clinical, and biological studies convincingly demonstrate that chronic inflammation predisposes to the development of human cancers. In digestive organs, inflammation-associated cancers include colitis-associated colorectal cancers, Helicobacter pylori-associated gastric cancer, as well as Barrett’s esophagus and esophageal adenocarcinoma associated with chronic duodenogastric-esophageal reflux. Cancer is a genomic disease, and stepwise accumulation of genetic and epigenetic alterations of tumor-related genes leads to the development of tumor cells. Recent genome analyses show that genetic alterations, which are evoked by inflammation, are latently accumulated in inflamed epithelial cells of digestive organs. Production of reactive oxygen and aberrant expression of activation-induced cytidine deaminase, a nucleotide-editing enzyme, could be induced in inflamed gastrointestinal epithelial cells and play a role as a genomic modulator of inflammation-associated carcinogenesis. Understanding the molecular linkage between inflammation and genetic alterations will open up a new field of tumor biology and provide a novel strategy for the prevention of inflammation-associated tumorigenesis.
Gastrointestinal Helminths of a European Moose Population in Poland
Authors: Filip-Hutsch Katarzyna , Czopowicz Michał , Barc Agnieszka , Demiaszkiewicz Aleksander W.
Published: April 2021

Parasitic infections have a negative impact on the fecundity and survival of wild ruminants, particularly moose; however, despite being more susceptible to parasitic diseases than other wild cervids, they remain poorly examined in this regard. Therefore, the aim of the present study was to identify gastrointestinal and liver helminth species of the moose population in central Europe, assess the factors contributing to infection intensities and examine their impact on moose health. Abomasum, small intestine, caecum and liver samples were collected from 46 moose in Poland and evaluated for helminth parasite fauna and histopathological changes. Additionally, 289 moose fecal samples were analyzed for the presence of eggs, oocysts and larvae of parasites. In total, 19 parasite taxa were identified. The most prevalent were Mazamastrongylus dagestanica and Ostertagia antipini, which are typical nematodes of moose, together with Spiculopteragia boehmi and O. leptospicularis, characteristic also of other cervids. Parasite species diversity and abomasal parasitic infection intensity were higher in adult moose than in yearlings and calves. The numbers of histopathological lesions depended on the intensity of parasitic infections, and were most severe in the livers of moose infected with Parafasciolopsis fasciolaemorpha. The analysis of fecal samples revealed several regional differences in the levels of parasite eggs, oocysts and larvae shedding. Our findings indicate an accumulation of parasite infections over time in moose, which may be related to high environmental parasite pressure, possibly connected with high moose density and the presence of wetlands; they also serve as the most comprehensive study of moose parasites in central Europe to date.
Bacterial Pathogens and Symbionts Harboured by Ixodes ricinus Ticks Parasitising Red Squirrels in the United Kingdom
Authors: Luu Lisa , Palomar Ana M. , Farrington Gemma , Schilling Anna-Katarina , Premchand-Branker Shonnette , McGarry John , Makepeace Benjamin L. , Meredith Anna , Bell-Sakyi Lesley
Published: April 2021

Red squirrels (Sciurus vulgaris) are native to most of Eurasia; in much of the United Kingdom, they have been supplanted by the non-native grey squirrel, and are considered an endangered species. Very little is known about the range of tick-borne pathogens to which UK red squirrels are exposed. As part of trap-and-release surveys examining prevalence of Mycobacterium spp. in red squirrel populations on two UK islands, Ixodes ricinus ticks were removed from squirrels and PCR screened for Borrelia spp., intracellular arthropod-borne bacteria and the parasitic wasp Ixodiphagus hookeri. At both sites, the most commonly encountered tick-transmitted bacterium was Borrelia burgdorferi sensu lato (overall minimum prevalence 12.7%), followed by Anaplasma phagocytophilum (overall minimum prevalence 1.6%). Single ticks infected with Spiroplasma were found at both sites, and single ticks infected with Borrelia miyamotoi or an Ehrlichia sp. at one site. Ticks harbouring Wolbachia (overall minimum prevalence 15.2%) were all positive for I. hookeri. Our study shows that UK red squirrels are potentially exposed to a variety of bacterial pathogens via feeding ticks. The effects on the health and survival of this already vulnerable wildlife species are unknown, and further studies are needed to evaluate the threat posed to red squirrels by Borrelia and other tick-borne pathogens.
Evidence for the Use of Mucus Swabs to Detect Renibacterium salmoninarum in Brook Trout
Authors: Riepe Tawni B. , Vincent Victoria , Milano Vicki , Fetherman Eric R. , Winkelman Dana L.
Published: April 2021

Efforts to advance fish health diagnostics have been highlighted in many studies to improve the detection of pathogens in aquaculture facilities and wild fish populations. Typically, the detection of a pathogen has required sacrificing fish; however, many hatcheries have valuable and sometimes irreplaceable broodstocks, and lethal sampling is undesirable. Therefore, the development of non-lethal detection methods is a high priority. The goal of our study was to compare non-lethal sampling methods with standardized lethal kidney tissue sampling that is used to detect Renibacterium salmoninarum infections in salmonids. We collected anal, buccal, and mucus swabs (non-lethal qPCR) and kidney tissue samples (lethal DFAT) from 72 adult brook trout (Salvelinus fontinalis) reared at the Colorado Parks and Wildlife Pitkin Brood Unit and tested each sample to assess R. salmoninarum infections. Standard kidney tissue detected R. salmoninarum 1.59 times more often than mucus swabs, compared to 10.43 and 13.16 times more often than buccal or anal swabs, respectively, indicating mucus swabs were the most effective and may be a useful non-lethal method. Our study highlights the potential of non-lethal mucus swabs to sample for R. salmoninarum and suggests future studies are needed to refine this technique for use in aquaculture facilities and wild populations of inland salmonids.
Haemophilus influenzae Meningitis Direct Diagnosis by Metagenomic Next-Generation Sequencing: A Case Report
Authors: Morsli Madjid , Kerharo Quentin , Delerce Jeremy , Roche Pierre-Hugues , Troude Lucas , Drancourt Michel
Published: April 2021

Current routine real-time PCR methods used for the point-of-care diagnosis of infectious meningitis do not allow for one-shot genotyping of the pathogen, as in the case of deadly Haemophilus influenzae meningitis. Real-time PCR diagnosed H. influenzae meningitis in a 22-year-old male patient, during his hospitalisation following a more than six-metre fall. Using an Oxford Nanopore Technologies real-time sequencing run in parallel to real-time PCR, we detected the H. influenzae genome directly from the cerebrospinal fluid sample in six hours. Furthermore, BLAST analysis of the sequence encoding for a partial DUF417 domain-containing protein diagnosed a non-b serotype, non-typeable H.influenzae belonging to lineage H. influenzae 22.1-21. The Oxford Nanopore metagenomic next-generation sequencing approach could be considered for the point-of-care diagnosis of infectious meningitis, by direct identification of pathogenic genomes and their genotypes/serotypes.
Opportunistic Premise Plumbing Pathogens. A Potential Health Risk in Water Mist Systems Used as a Cooling Intervention
Authors: Masaka Edmore , Reed Sue , Davidson Maggie , Oosthuizen Jacques
Published: April 2021

Water mist systems (WMS) are used for evaporative cooling in public areas. The health risks associated with their colonization by opportunistic premise plumbing pathogens (OPPPs) is not well understood. To advance the understanding of the potential health risk of OPPPs in WMS, biofilm, water and bioaerosol samples (n = 90) from ten (10) WMS in Australia were collected and analyzed by culture and polymerase chain reaction (PCR) methods to detect the occurrence of five representative OPPPs: Legionella pneumophila, Pseudomonas aeruginosa, Mycobacterium avium, Naegleria fowleri and Acanthamoeba. P. aeruginosa (44%, n = 90) occurred more frequently in samples, followed by L. pneumophila serogroup (Sg) 2–14 (18%, n = 90) and L. pneumophila Sg 1 (6%, n = 90). A negative correlation between OPPP occurrence and residual free chlorine was observed except with Acanthamoeba, rs (30) = 0.067, p > 0.05. All detected OPPPs were positively correlated with total dissolved solids (TDS) except with Acanthamoeba. Biofilms contained higher concentrations of L. pneumophila Sg 2–14 (1000–3000 CFU/mL) than water samples (0–100 CFU/mL). This study suggests that WMS can be colonized by OPPPs and are a potential health risk if OPPP contaminated aerosols get released into ambient atmospheres.
Leishmania spp.-Infected Dogs Have Circulating Anti-Skeletal Muscle Autoantibodies Recognizing SERCA1
Authors: Prisco Francesco , De Biase Davide , Piegari Giuseppe , Oriente Francesco , Cimmino Ilaria , De Pasquale Valeria , Costanzo Michele , Santoro Pasquale , Gizzarelli Manuela , Papparella Serenella , Paciello Orlando
Published: April 2021

Leishmania spp. infection is associated with an inflammatory myopathy (IM) in dogs. The pathomechanism underlying this disorder is still elusive, however, the pattern of cellular infiltration and MHC I and II upregulation indicate an immune-mediated myositis. This study aimed to investigate the presence of autoantibodies targeting the skeletal muscle in sera of leishmania-infected dogs and individuate the major autoantigen. We tested sera from 35 leishmania-infected dogs and sera from 10 negative controls for the presence of circulating autoantibodies with indirect immunofluorescence. Immunoblot and mass spectrometry were used to identify the main target autoantigen. Immunocolocalization and immunoblot on immunoprecipitated muscle proteins were performed to confirm the individuated major autoantigen. We identified circulating autoantibodies that recognize skeletal muscle antigen(s) in sera of leishmania-infected dogs. The major antigen was identified as the sarcoplasmic/endoplasmic reticulum Ca2+-ATPase 1 (SERCA1). We also found that canine SERCA1 presents several identical traits to the calcium-translocating P-type ATPase of Leishmania infantum. In the present study, we defined circulating anti-SERCA1 autoantibodies as part of the pathogenesis of the leishmania-associated IM in dogs. Based on our data, we hypothesize that antigen mimicry is the mechanism underlying the production of these autoantibodies in leishmania-infected dogs.
Virulence of Clinical Candida Isolates
Authors: Mroczyńska Martyna , Brillowska-Dąbrowska Anna
Published: April 2021

The factors enabling Candida spp. infections are secretion of hydrolytic enzymes, adherence to surfaces, biofilm formation or morphological transition, and fitness attributes. The aim of this study was to investigate the correlation between known extracellular virulence factors and survival of Galleria mellonella larvae infected with clinical Candida. The 25 isolates were tested and the activity of proteinases among 24/24, phospholipases among 7/22, esterases among 14/23, hemolysins among 18/24, and biofilm formation ability among 18/25 isolates was confirmed. Pathogenicity investigation using G. mellonella larvae as host model demonstrated that C. albicans isolates and C. glabrata isolate were the most virulent and C. krusei isolates were avirulent. C. parapsilosis virulence was identified as varied, C. inconspicua were moderately virulent, and one C. palmioleophila isolate was of low virulence and the remaining isolates of this species were moderately virulent. According to our study, virulence of Candida isolates is related to the expression of proteases, hemolysins, and esterases.
Synergistic Photoantimicrobial Chemotherapy of Methylene Blue-Encapsulated Chitosan on Biofilm-Contaminated Titanium
Authors: Lin Chiu-Nan , Ding Shinn-Jyh , Chen Chun-Cheng
Published: April 2021

Intensive efforts have been made to eliminate or substantial reduce bacterial adhesion and biofilm formation on titanium implants. However, in the management of peri-implantitis, the methylene blue (MB) photosensitizer commonly used in photoantimicrobial chemotherapy (PACT) is limited to a low retention on the implant surface. The purpose of this study was to assess enhancive effect of water-soluble quaternary ammonium chitosan (QTS) on MB retention on biofilm-infected SLA (sandblasted, large grid, and acid-etched) Ti alloy surfaces in vitro. The effectiveness of QTS + MB with different concentrations in eliminating Gram-negative A. actinomycetemcomitans or Gram-positive S. mutans bacteria was compared before and after PACT. Bacterial counting and lipopolysaccharide (LPS) detection were examined, and then the growth of human osteoblast-like MG63 cells was evaluated. The results indicated that the synergistic QTS + MB with retention ability significantly decreased the biofilm accumulation on the Ti alloy surface, which was better than the same concentration of 1 wt% methyl cellulose (MC). More importantly, the osteogenic activity of MG63 cells on the disinfected sample treated by QTS + MB-PACT modality was comparable to that of sterile Ti control, significantly higher than that by MC + MB-PACT modality. It is concluded that, in terms of improved retention efficacy, effective bacteria eradication, and enhanced cell growth, synergistically, PACT using the 100 μg/mL MB-encapsulated 1% QTS was a promising modality for the treatment of peri-implantitis.
An Overview of the Biological Activity of Pyrrolo[3,4-c]pyridine Derivatives
Authors: Wójcicka Anna , Redzicka Aleksandra
Published: April 2021

Pyrrolo[3,4-c]pyridine is one of the six structural isomers of the bicyclic ring system containing a pyrrole moiety fused to a pyridine nucleus. The broad spectrum of pharmacological properties of pyrrolo[3,4-c]pyridine derivatives is the main reason for developing new compounds containing this scaffold. This review presents studies on the biological activity of pyrrolo[3,4-c]pyridines that have been reported in the scientific literature. Most of these derivatives have been studied as analgesic and sedative agents. Biological investigations have shown that pyrrolo[3,4-c]pyridines can be used to treat diseases of the nervous and immune systems. Their antidiabetic, antimycobacterial, antiviral, and antitumor activities also have been found.
Membrane Environment Modulates Ligand-Binding Propensity of P2Y12 Receptor
Authors: Haghighi Fatemeh , Yesylevskyy Semen , Davani Siamak , Ramseyer Christophe
Published: April 2021

The binding of natural ligands and synthetic drugs to the P2Y12 receptor is of great interest because of its crucial role in platelets activation and the therapy of arterial thrombosis. Up to now, all computational studies of P2Y12 concentrated on the available crystal structures, while the role of intrinsic protein dynamics and the membrane environment in the functioning of P2Y12 was not clear. In this work, we performed all-atom molecular dynamics simulations of the full-length P2Y12 receptor in three different membrane environments and in two possible conformations derived from available crystal structures. The binding of ticagrelor, its two major metabolites, adenosine diphosphate (ADP) and 2-Methylthioadenosine diphosphate (2MeS-ADP) as agonist, and ethyl 6-[4-(benzylsulfonylcarbamoyl)piperidin-1-yl]-5-cyano-2-methylpyridine-3-carboxylate (AZD1283)as antagonist were assessed systematically by means of ensemble docking. It is shown that the binding of all ligands becomes systematically stronger with the increase of the membrane rigidity. Binding of all ligands to the agonist-bound-like conformations is systematically stronger in comparison to antagonist-bound-likes ones. This is dramatically opposite to the results obtained for static crystal structures. Our results show that accounting for internal protein dynamics, strongly modulated by its lipid environment, is crucial for correct assessment of the ligand binding to P2Y12.
Seed- and Soil-Dependent Differences in Murine Breast Tumor Microenvironments Dictate Anti-PD-L1 IgG Delivery and Therapeutic Efficacy
Authors: Liu Yan Ting , Goel Shreya , Kai Megumi , Moran Guerrero Jose Alberto , Nguyen Thao , Mai Junhua , Shen Haifa , Ziemys Arturas , Yokoi Kenji
Published: April 2021

We sought to determine if Stephen Paget’s “seed and soil” hypothesis of organ-preference patterns of cancer metastasis can explain the development of heterogeneity in a tumor microenvironment (TME) as well as immunotherapeutic delivery and efficacy. We established single-cell-derived clones (clones 1 and 16) from parental 4T1 murine breast cancer cells to create orthotopic primary and liver metastasis models to deconvolute polyclonal complexity cancer cells and the difference in TME-derived heterogeneities. Tumor-bearing mice were treated with anti-PD-L1 IgG or a control antibody, and immunofluorescent imaging and quantification were then performed to evaluate the therapeutic efficacy on tumor growth, the delivery of therapy to tumors, the development of blood vessels, the expression of PD-L1, the accumulation of immune cells, and the amount of coagulation inside tumors. The quantification showed an inverse correlation between the amount of delivered therapy and therapeutic efficacy in parental-cell-derived tumors. In contrast, tumors originating from clone 16 cells accumulated a significantly greater amount of therapy and responded better than clone-1-derived tumors. This difference was greater when tumors grew in the liver than the primary site. A similar trend was found in PD-L1 expression and immune cell accumulation. However, the change in the number of blood vessels was not significant. In addition, the amount of coagulation was more abundant in clone-1-derived tumors when compared to others. Thus, our findings reconfirmed the seed- and soil-dependent differences in PD-L1 expression, therapeutic delivery, immune cell accumulation, and tumor coagulation, which can constitute a heterogeneous delivery and response of immunotherapy in polyclonal tumors growing in different organs.
Analytical Techniques for Structural Characterization of Proteins in Solid Pharmaceutical Forms: An Overview
Authors: Bolje Aljoša , Gobec Stanislav
Published: April 2021

Therapeutic proteins as biopharmaceuticals have emerged as a very important class of drugs for the treatment of many diseases. However, they are less stable compared to conventional pharmaceuticals. Their long-term stability in solid forms, which is critical for product performance, depends heavily on the retention of the native protein structure during the lyophilization (freeze-drying) process and, thereafter, in the solid state. Indeed, the biological function of proteins is directly related to the tertiary and secondary structure. Besides physical stability and biological activity, conformational stability (three-dimensional structure) is another important aspect when dealing with protein pharmaceuticals. Moreover, denaturation as loss of higher order structure is often a precursor to aggregation or chemical instability. Careful study of the physical and chemical properties of proteins in the dried state is therefore critical during biopharmaceutical drug development to deliver a final drug product with built-in quality that is safe, high-quality, efficient, and affordable for patients. This review provides an overview of common analytical techniques suitable for characterizing pharmaceutical protein powders, providing structural, and conformational information, as well as insights into dynamics. Such information can be very useful in formulation development, where selecting the best formulation for the drug can be quite a challenge.
Matrix Effects of the Hydroethanolic Extract of Calyces of Physalis peruviana L. on Rutin Pharmacokinetics in Wistar Rats Using Population Modeling
Authors: Domínguez Moré Gina Paola , Cardona María Isabel , Sepúlveda Paula Michelle , Echeverry Sandra Milena , Oliveira Simões Cláudia Maria , Aragón Diana Marcela
Published: April 2021

Rutin is the rutinose conjugate of quercetin. It presents several biological activities and is the major flavonoid in the hydroalcoholic extract of the calyces of Physalis peruviana L. It also shows hypoglycemic activity after oral administration. The aim of this work was to study the matrix effects of the extract from P. peruviana calyces on the pharmacokinetics of rutin and its metabolites in Wistar rats, using non-compartmental and population pharmacokinetic analyses. A pharmacokinetic study was performed after intravenous and oral administration of different doses of pure rutin and the extract. In the non-compartmental analysis, it was found that rutin from the extract exhibited higher distribution and clearance, as well as an 11-fold increase in the bioavailability of its active metabolites. A population pharmacokinetic model was also carried out with two compartments, double absorption and linear elimination, in which the extract and the doses were the covariates involved. This model correctly described the differences observed between rutin as a pure compound and rutin from the extract, including the dose dependency.
Plasmonic Fishnet Structures for Dual Band THz Left-Handed Metamaterials
Authors: Zhang Shaohua , Wei Zhifu , Xu Ling , Xu Jianwei , Ouyang Shoujian , Shen Yun
Published: April 2021

Plasmonic fishnet structures are proposed to realize dual-band terahertz (THz) left-handed metamaterials (LHMs). The calculated permittivity ε and permeability μ of single-layer LHMs show that ε < 0 and μ < 0 can be simultaneously satisfied in two frequency bands, resulting in dual-band LHMs. The electric and magnetic field distributions are consistent with the current distributions and confirm the physical mechanism of negative permeability. Furthermore, the existence of negative refraction is validated by a stacked LHMs prism with an angle of 1.79°. It is shown that at 2.04–2.42 THz and 3.12–3.28 THz bands, negative refractive indices of the prism can be obtained, facilitating the practical application of LHMs in THz image, sensor, detection, communication, and so on.