bluuebunny/crossref_metadata_2025 huggingface dataset:
Advances and Perspectives in Chemical Imaging in Cellular Environments Using Electrochemical Methods
Authors: Lazenby Robert A. , White Ryan J.
Published: May 2018

This review discusses a broad range of recent advances (2013–2017) in chemical imaging using electrochemical methods, with a particular focus on techniques that have been applied to study cellular processes, or techniques that show promise for use in this field in the future. Non-scanning techniques such as microelectrode arrays (MEAs) offer high time-resolution (<10 ms) imaging; however, at reduced spatial resolution. In contrast, scanning electrochemical probe microscopies (SEPMs) offer higher spatial resolution (as low as a few nm per pixel) imaging, with images collected typically over many minutes. Recent significant research efforts to improve the spatial resolution of SEPMs using nanoscale probes and to improve the temporal resolution using fast scanning have resulted in movie (multiple frame) imaging with frame rates as low as a few seconds per image. Many SEPM techniques lack chemical specificity or have poor selectivity (defined by the choice of applied potential for redox-active species). This can be improved using multifunctional probes, ion-selective electrodes and tip-integrated biosensors, although additional effort may be required to preserve sensor performance after miniaturization of these probes. We discuss advances to the field of electrochemical imaging, and technological developments which are anticipated to extend the range of processes that can be studied. This includes imaging cellular processes with increased sensor selectivity and at much improved spatiotemporal resolution than has been previously customary.
“Everybody Puts Their Whole Life on Facebook”: Identity Management and the Online Social Networks of LGBTQ Youth
Authors: McConnell Elizabeth , Néray Bálint , Hogan Bernie , Korpak Aaron , Clifford Antonia , Birkett Michelle
Published: May 2018

Lesbian, gay, bisexual, transgender, and queer (LGBTQ) youth and young adults almost inevitably “come out”, or self-disclose their identity to others. Some LGBTQ youth are more uniformly “out”, while others may disclose to some groups but not others. This selective disclosure is complicated on real name social media sites, which tend to encourage a unified presentation of self across social contexts. We explore these complications with a cohort of LBGTQ youth on Facebook (N = 199, Mage = 24.13). Herein we ask: How do LBGTQ youth manage the disclosure of their sexual orientation and/or gender identity to different people in their lives? Further, are there identifiable differences in the online social network structure for LGBTQ youth who manage outness in different ways? Finally, how do LGBTQ young people describe their experiences on Facebook? We answer these questions using a mixed methods approach, combining statistical cluster analysis, network visualization, and qualitative data. Our findings illustrate patterns in network structure by outness cluster type, highlighting both the work involved in managing one’s online identity as well as the costs to (semi-) closeted individuals including a considerably lower overall network connectivity. In particular, outness to family characterized LGBTQ young people’s experiences on Facebook.
Women’s Mid-Life Night Sweats and 2-Year Bone Mineral Density Changes: A Prospective, Observational Population-Based Investigation from the Canadian Multicentre Osteoporosis Study (CaMos)
Authors: Wong Evelyn , Tomlinson George , Pinto Marsha , Berger Claudie , Cheung Angela , Prior Jerilynn
Published: May 2018

Women’s hot flushes and night sweats, collectively called vasomotor symptoms (VMS), are maximal (79%) in late perimenopause. The evidence describing whether VMS are associated with loss of areal bone mineral density (BMD) is mixed. We examined baseline and 2-year data for 1570 randomly selected women aged 43–63 in the Canadian Multicentre Osteoporosis Study (CaMos), a prospective Canada-wide study; we used linear regression to assess the relationship of night sweats (VMSn) with BMD and its changes. Clinically important VMSn occurred for 12.2%. Women with VMSn were slightly younger (54.5 vs. 55.3 years, p = 0.02) and less likely to use sex steroid therapies (39.8% vs. 51.4%, p < 0.05). BMD at the lumbar spine (L1-4), femoral neck (FN) and total hip (TH) were similar between those with/without VMSn. In adjusted models, we did not find a significant association between VMSn and 2-year change in L1-4, FN and TH BMD. Age, reproductive status, weight, sex steroid therapy and smoking status were associated with 2-year change in BMD. Incident fractures over 2 years also did not differ by VMSn. Our analyses were restricted to VMSn and may not truly capture the relationship between VMS and BMD. Additional research involving VMS, bone loss and fracture incidence is needed.
Cognitive Impact and Psychophysiological Effects of Stress Using a Biomonitoring Platform
Authors: Rodrigues Susana , Paiva Joana S. , Dias Duarte , Aleixo Marta , Filipe Rui Manuel , Cunha João Paulo S.
Published: May 2018

Stress can impact multiple psychological and physiological human domains. In order to better understand the effect of stress on cognitive performance, and whether this effect is related to an autonomic response to stress, the Trier Social Stress Test (TSST) was used as a testing platform along with a 2-Choice Reaction Time Task. When considering the nature and importance of Air Traffic Controllers (ATCs) work and the fact that they are subjected to high levels of stress, this study was conducted with a sample of ATCs (n = 11). Linear Heart Rate Variability (HRV) features were extracted from ATCs electrocardiogram (ECG) acquired using a medical-grade wearable ECG device (Vital Jacket® (1-Lead, Biodevices S.A, Matosinhos, Portugal)). Visual Analogue Scales (VAS) were also used to measure perceived stress. TSST produced statistically significant changes in some HRV parameters (Average of normal-to-normal intervals (AVNN), Standard Deviation of all NN (SDNN), root mean square of differences between successive rhythm-to-rhythm (RR) intervals (RMSSD), pNN20, and LF/HF) and subjective measures of stress, which recovered after the stress task. Although these short-term changes in HRV showed a tendency to normalize, an impairment on cognitive performance was evident. Despite that participant’s reaction times were lower, the accuracy significantly decreased, presenting more errors after performing the acute stress event. Results can also point to the importance of the development of quantified occupational health (qOHealth) devices to allow for the monitoring of stress responses.
Location of Femoral Fractures in Patients with Different Weight Classes in Fall and Motorcycle Accidents: A Retrospective Cross-Sectional Analysis
Authors: Chang Meng-Wei , Liu Hang-Tsung , Huang Chun-Ying , Chien Peng-Chen , Hsieh Hsiao-Yun , Hsieh Ching-Hua
Published: May 2018

Background: This study aimed to determine the incidence of femoral fracture location in trauma patients with different weight classes in fall and motorcycle accidents. Methods: A total of 2647 hospitalized adult patients with 2760 femoral fractures from 1 January 2009 to 31 December 2014 were included in this study. Femoral fracture sites were categorized based on their location: proximal femur (type A, trochanteric; type B, neck; and type C, head), femoral shaft, and distal femur. The patients were further classified as obese (body mass index [BMI] of ≥30 kg/m2), overweight (BMI of <30 but ≥25 kg/m2), normal weight (BMI of <25 but ≥18.5 kg/m2), and underweight (BMI of <18.5 kg/m2). Odds ratios and 95% confidence intervals of the incidences of femoral fracture location were calculated in patients with different weight classes in fall or motorcycle accidents, and they were then compared with those in patients with normal weight. p values of <0.05 were considered statistically significant. Results: Most of the fractures sustained in fall accidents presented in the proximal type A (41.8%) and type B (45.3%) femur, whereas those sustained in motorcycle accidents involved the femoral shaft (37.1%), followed by the distal femur (22.4%) and proximal type A femur (21.2%). In fall accidents, compared with normal-weight patients, obese and overweight patients sustained lower odds of risk for proximal type B fractures but higher odds of risk for femoral shaft and distal femoral fractures. In motorcycle accidents, compared with normal-weight patients, obese patients sustained lower odds of risk for proximal type B fractures but no difference in odds of risk for femoral shaft and distal femoral fractures. Overweight and underweight patients who sustained fractures in a motorcycle accident did not have different fracture location patterns compared with normal-weight patients. Conclusions: This study revealed that femoral fracture locations differ between fall and motorcycle accidents. Moreover, greater soft tissue padding may reduce impact forces to the greater trochanteric region in obese patients during fall accidents, and during motorcycle accidents, the energy transmitted and the point of impact may dominantly determine the location of femoral fractures.
Weight Concerns and Use of Cigarettes and E-Cigarettes among Young Adults
Authors: Bennett Brooke L. , Pokhrel Pallav
Published: May 2018

Higher weight concerns have been associated with higher cigarette smoking, particularly among women, partly because smoking is perceived to limit appetite for food. E-cigarettes are increasingly used as an alternative to combustible cigarettes and are widely believed to be less harmful than cigarettes. Currently it is not known whether weight concerns are associated with e-cigarette use among young adults. In this study, we tested the association between weight concerns and cigarette and e-cigarette use and use susceptibility among young adults. Cross-sectional data were collected from college students (N = 470; M age = 20.9; SD = 2.1; 65% women). Results indicated that weight concerns were significantly associated with lifetime and current cigarette smoking status, current cigarette smoking frequency and cigarette use susceptibility (among never smokers), adjusting for demographics variables. Weight concerns were not associated with lifetime or current e-cigarette use status or e-cigarette use susceptibility, adjusting for demographics and cigarette use status. However, higher weight concerns were associated with higher frequency of current e-cigarette use, adjusting for demographic variables and current cigarette smoking frequency. These findings imply that even though weight concerns may not motivate e-cigarette use as strongly as cigarette use, weight concerns may influence higher intensity of e-cigarette use among users.
Which Patients Are Prescribed Escitalopram?: Predictors for Escitalopram Prescriptions and Functional Outcomes among Patients with Acute Ischemic Stroke
Authors: Kim Jarim , Kim Yerim
Published: May 2018

Recent studies have demonstrated that antidepressants could enhance functional recovery via neuroplasticity beyond solely treating depression. However, since Koreans typically show a greater aversion to seeking psychiatric care than citizens of Western countries, the number of antidepressant prescriptions is low. Through this study, we aim to identify the factors that lead to the prescription of antidepressants in subjects with acute ischemic stroke (AIS) in clinical practice. A total of 775 patients with ischemic stroke (IS) participated in this study from March 2010 to May 2013. We used binary logistic regression to find predictors for escitalopram prescriptions. To reveal predictors for short-term functional outcomes, we used an adjusted regression model using a propensity score. Among the 775 participants, 39 (5.03%) were prescribed escitalopram. The duration of hospital stay (odds ratio (OR) = 1.07; 95% confidence interval (CI) = 1.04–1.10) and the use of mechanical ventilation were significantly more closely related to escitalopram prescriptions as compared to non-escitalopram prescriptions (OR = 5.15; 95% CI = 1.53–17.40). The use of escitalopram, on the other hand, was not significantly associated with short-term functional outcomes (OR = 1.27; 95% CI = 0.50–3.25). Duration of hospital stay and use of mechanical ventilation were significantly related to escitalopram prescriptions.
Racial Disparities and Preventive Measures to Renal Cell Carcinoma
Authors: Sims Jennifer N. , Yedjou Clement G. , Abugri Daniel , Payton Marinelle , Turner Timothy , Miele Lucio , Tchounwou Paul B.
Published: May 2018

Kidney cancer ranks among the top 10 cancers in the United States. Although it affects both male and female populations, it is more common in males. The prevalence rate of renal cell carcinoma (RCC), which represents about 85% of kidney cancers, has been increasing gradually in many developed countries. Family history has been considered as one of the most relevant risk factors for kidney cancer, although most forms of an inherited predisposition for RCC only account for less than four percent. Lifestyle and other factors such as occupational exposure, high blood pressure, poor diet, and heavy cigarette smoking are highly associated with its incidence and mortality rates. In the United States, White populations have the lowest prevalence of RCC compared to other ethnic groups, while Black Americans suffer disproportionally from the adverse effects of RCC. Hence, this review article aims at identifying the major risk factors associated with RCC and highlighting the new therapeutic approaches for its control/prevention. To achieve this specific aim, articles in peer-reviewed journals with a primary focus on risk factors related to kidney cancer and on strategies to reduce RCC were identified. The review was systematically conducted by searching the databases of MEDLINE, PUBMED Central, and Google Scholar libraries for original articles. From the search, we found that the incidence and mortality rates of RCC are strongly associated with four main risk factors, including family history (genetics), lifestyle (poor diet, cigarette smoking, excess alcohol drinking), environment (community where people live), and occupation (place where people work). In addition, unequal access to improvement in RCC cancer treatment, limited access to screening and diagnosis, and limited access to kidney transplant significantly contribute to the difference observed in survival rate between African Americans and Caucasians. There is also scientific evidence suggesting that some physicians contribute to racial disparities when performing kidney transplant among minority populations. New therapeutic measures should be taken to prevent or reduce RCC, especially among African Americans, the most vulnerable population group.
Persistence of Salmonella Typhimurium in Well Waters from a Rural Area of Changchun City, China
Authors: Li Jiahang , Ding Meiyue , Han Ziming , Ma Jincai
Published: May 2018

Salmonella-contaminated well water could cause major infection outbreaks worldwide, thus, it is crucial to understand their persistence in those waters. In this study, we investigated the persistence of Salmonella enterica serovar Typhimurium in 15 well waters from a rural area of Changchun City, China. Results illustrated that the time to reach detection limit (ttd), first decimal reduction time (δ), and the shape parameter (p) ranged from 15 to 80 days, from 5.6 to 66.9 days, and from 0.6 to 6.6, respectively. Principal component analysis showed that ttds of S. Typhimurium were positively correlated with total organic carbon, pH, NH4+–N, and total phosphate. Multiple stepwise regression analysis revealed that ttds could be best predicted by NH4+–N and pH. Canonical correspondence analysis and variation partition analysis revealed that NH4+–N and pH, and the rest of the water parameters, could explain 27.60% and 28.15% of overall variation of the survival behavior, respectively. In addition, ttds were found to be correlated (p < 0.01) with δ and p. Our results showed that the longer survival (>2.5 months) S. Typhimurium could constitute an increased health risk to the local communities, and provided insights into the close linkage between well water quality and survival of S. Typhimurium.
The Impact of Industrial Odors on the Subjective Well-Being of Communities in Colorado
Authors: Eltarkawe Mohamed A. , Miller Shelly L.
Published: May 2018

Odor pollution was identified as a top priority of the community of North Denver. Previous studies that investigated the impact of air pollution in North Denver focused on adverse health effects, rather than mental well-being. This study assessed the impact of odors from industrial sources on the subjective well-being (SWB) of North Denver residents, and of four similar communities in Colorado for comparison. An online survey was sent to participants from Greeley, Fort Collins, Fort Lupton, North Denver, and Pueblo, asking questions about SWB and odors in their areas (n = 351). The evaluation of SWB was performed using a novel approach that appraises three aspects of SWB. This approach of evaluating SWB has not been used in odor exposure studies. A proportional odds logistic regression model was used to estimate nine measures of SWB. The results showed that participants who reported that the air is very fresh or the odor is highly acceptable had higher levels of SWB. This association suggests that residents who live in areas exposed to strong industrial odors had lower levels of SWB. A subset of participants in this study took the survey four times in one year. Longitudinal analysis showed that evaluative satisfaction was slightly associated with seasonality. Both satisfaction with how life turned out and satisfaction with standards of living slightly increased during the fourth quarter of the year. The study also found that four of the nine measures can be used to represent SWB in future studies. Two of those measures were evaluative SWB, and the other two were positive hedonic SWB measures. A comparison between the five communities showed that well-being levels in North Denver and Greeley were not significantly different than those in Fort Collins or Fort Lupton. The comparison, however, showed that Pueblo had the lowest levels of well-being among all communities.
Drivers Are More Physically Active Than Non-Drivers in Older Adults
Authors: Amagasa Shiho , Fukushima Noritoshi , Kikuchi Hiroyuki , Takamiya Tomoko , Odagiri Yuko , Oka Koichiro , Inoue Shigeru
Published: May 2018

Car use has been identified as sedentary behavior, although it may enhance mobility, particularly in the older population. This cross-sectional study aimed to compare the time spent in objectively determined sedentary behavior (SB) and physical activity (PA) between older drivers and non-drivers. Four hundred and fifty Japanese older adults (74.3 ± 2.9 years) who had valid accelerometer data were included. They were asked to respond to a questionnaire and wear an accelerometer (HJA-350IT, Omron Healthcare) on their waist for 7 consecutive days in 2015. To compare activity time between drivers and non-drivers, we calculated estimated means using analysis of covariance, adjusting for sociodemographic, physical, and psychological factors and accelerometer wear time. Compared to non-drivers, drivers engaged in more light-intensity PA (LPA) (drivers: 325.0 vs. non-drivers: 289.0 min/day) and moderate-to-vigorous PA (drivers: 37.5 vs. non-drivers: 30.0 min/day) and less SB (drivers: 493.4 vs. non-drivers: 535.9 min/day) (all p < 0.05). After stratification by age, sex, and residential area, larger effect of driving on PA time was found in older-older adults, in men, and in rural residents. Older drivers were found to be more physically active than non-drivers, suggesting more access to outdoor activities or expanding social network.
Effect of Cardiac Rehabilitation on Quality of Life, Depression and Anxiety in Asian Patients
Authors: Choo Carol C. , Chew Peter K. H. , Lai Shuet-Ming , Soo Shuenn-Chiang , Ho Cyrus S. , Ho Roger C. , Wong Raymond C.
Published: May 2018

This study explored the effect of cardiac rehabilitation on quality of life, depression, and anxiety in Asian patients in Singapore. Out of the 194 patients who were recruited into the study, 139 patients (71.6%) completed both the pre- and post-cardiac rehabilitation questionnaires. Their ages ranged from 28 to 80 (M = 56.66, SD = 8.88), and 103 patients (74.1%) were males and 21 patients (15.1%) were females. As hypothesized, there was a statistically significant difference between the pre- and post-cardiac rehabilitation scores on the combined dependent variables, F (4, 135) = 34.84, p < 0.001; Wilks’ Lambda = 0.49; partial eta squared = 0.51. An inspection of the mean scores indicated that patients reported higher levels of physical and mental quality of life and lower levels of depression post-cardiac rehabilitation. The findings were discussed in regards to implications in cardiac rehabilitation in Singapore.
Gender and Sexual Orientation Differences in Human Papillomavirus (HPV) Vaccine Uptake among Chinese Young Adults
Authors: Choi Edmond Pui Hang , Wong Janet Yuen Ha , Lau Angel Yin Yim , Fong Daniel Yee Tak
Published: May 2018

To date, empirical studies on HPV vaccine uptake are still limited in Chinese populations and mainly conducted in female cohorts. In order to inform health services planning and health promotion programmes for HPV vaccination, this cross-sectional study aimed to report the prevalence of self-reported HPV vaccination status and to examine gender and sexual orientation differences in the uptake of HPV vaccine in Chinese college students. The overall prevalence of HPV vaccine uptake was 27.6% (n = 242), with a significantly higher prevalence in females (39.7%) than in males (4.7%). 91.4% of subjects heard about HPV vaccination, with a significantly higher prevalence in females (93.8%) than in males (86.8%). The prevalence of HPV vaccine uptake was only 2.6% for bisexual/ homosexual males and 5.0% for heterosexual males. Only 45.8% of the overall subjects knew HPV vaccination is not for females only, with a significantly higher prevalence in females (49.7%) than in males (38.6%). The low prevalence of male HPV vaccine uptake and awareness called for the need to have more male-specific HPV campaigns to promote HPV vaccination awareness and uptake in males to reduce the overall prevalence of HPV infection.
Multi-Target Risk Assessment of Potentially Toxic Elements in Farmland Soil Based on the Environment-Ecological-Health Effect
Authors: Wang Zhongyang , Meng Bo , Zhang Wei , Bai Jinheng , Ma Yingxin , Liu Mingda
Published: May 2018

There are potential impacts of Potentially Toxic Elements (PTEs) (e.g., Cd, Cr, Ni, Cu, As, Zn, Hg, and Pb) in soil from the perspective of the ecological environment and human health, and assessing the pollution and risk level of soil will play an important role in formulating policies for soil pollution control. Lingyuan, in the west of Liaoning Province, China, is a typical low-relief terrain of a hilly area. The object of study in this research is the topsoil of farmland in this area, of which 71 soil samples are collected. In this study, research methods, such as the Nemerow Index, Potential Ecological Hazard Index, Ecological Risk Quotient, Environmental Exposure Hazard Analysis, Positive Matrix Factorization Model, and Land Statistical Analysis, are used for systematical assessment of the pollution scale, pollution level, and source of PTEs, as well as the ecological environmental risks and health risks in the study area. The main conclusions are: The average contents of As, Cd, Cr, Cu, Hg, Zn, Ni, and Pb of the soil are 5.32 mg/kg, 0.31 mg/kg, 50.44 mg/kg, 47.05 mg/kg, 0.03 mg/kg, 79.36 mg/kg, 26.01 mg/kg, and 35.65 mg/kg, respectively. The contents of Cd, Cu, Zn, and Pb exceed the background value of local soil; Cd content of some study plots exceeds the National Soil Environmental Quality Standard Value (0.6 mg/kg), and the exceeding standard rate of study plots is 5.63%; the comprehensive potential ecological hazard assessment in the study area indicates that the PTEs are at a slight ecological risk; probabilistic hazard quotient assessment indicates that the influence of PTEs on species caused by Cu is at a slight level (p = 10.93%), and Zn, Pb, and Cd are at an acceptable level. For the ecological process, Zn is at a medium level (p = 25.78%), Cu is at a slight level (19.77%), and the influence of Cd and Pb are acceptable; human health hazard assessment states that the Non-carcinogenic comprehensive health hazard index HI = 0.16 < 1, indicating that PTEs in soil have no significant effect on people’s health through exposure; the PMF model (Positive Matrix Factorization) shows that the contribution rates of agricultural source, industrial source, atmospheric dust source, and natural source are 13.15%, 25.33%, 18.47%, and 43.05%, respectively.
Association between Serum 25-Hydroxy Vitamin D Levels and the Prevalence of Adult-Onset Asthma
Authors: Cherrie Mark P. C. , Sarran Christophe , Osborne Nicholas J.
Published: May 2018

The major circulating metabolite of vitamin D (25(OH)D) has been implicated in the pathogenesis for atopic dermatitis, asthma and other allergic diseases due to downstream immunomodulatory effects. However, a consistent association between 25(OH)D and asthma during adulthood has yet to be found in observational studies. We aimed to test the association between 25(OH)D and asthma during adulthood and hypothesised that this association would be stronger in non-atopic participants. Using information collected on the participants of the 1958 birth cohort, we developed a novel measure of atopic status using total and specific IgE values and reported history of eczema and allergic rhinitis. We designed a nested case-control analysis, stratified by atopic status, and using logistic regression models investigated the association between 25(OH)D measured at age 46 years with the prevalence of asthma and wheezy bronchitis at age 50 years, excluding participants who reported ever having asthma or wheezy bronchitis before the age of 42. In the fully adjusted models, a 10 nmol/L increase in serum 25(OH)D prevalence had a significant association with asthma (aOR 0.94; 95% CI 0.88–1.00). There was some evidence of an atopic dependent trend in the association between 25(OH)D levels and asthma. Further analytical work on the operationalisation of atopy status would prove useful to uncover whether there is a role for 25(OH)D and other risk factors for asthma.
Genome-Wide Identification and Expression Analysis of the UGlcAE Gene Family in Tomato
Authors: Ding Xing , Li Jinhua , Pan Yu , Zhang Yue , Ni Lei , Wang Yaling , Zhang Xingguo
Published: May 2018

The UGlcAE has the capability of interconverting UDP-d-galacturonic acid and UDP-d-glucuronic acid, and UDP-d-galacturonic acid is an activated precursor for the synthesis of pectins in plants. In this study, we identified nine UGlcAE protein-encoding genes in tomato. The nine UGlcAE genes that were distributed on eight chromosomes in tomato, and the corresponding proteins contained one or two trans-membrane domains. The phylogenetic analysis showed that SlUGlcAE genes could be divided into seven groups, designated UGlcAE1 to UGlcAE6, of which the UGlcAE2 were classified into two groups. Expression profile analysis revealed that the SlUGlcAE genes display diverse expression patterns in various tomato tissues. Selective pressure analysis indicated that all of the amino acid sites of SlUGlcAE proteins are undergoing purifying selection. Fifteen stress-, hormone-, and development-related elements were identified in the upstream regions (0.5 kb) of these SlUGlcAE genes. Furthermore, we investigated the expression patterns of SlUGlcAE genes in response to three hormones (indole-3-acetic acid (IAA), gibberellin (GA), and salicylic acid (SA)). We detected firmness, pectin contents, and expression levels of UGlcAE family genes during the development of tomato fruit. Here, we systematically summarize the general characteristics of the SlUGlcAE genes in tomato, which could provide a basis for further function studies of tomato UGlcAE genes.
Prioritization of Variants Detected by Next Generation Sequencing According to the Mutation Tolerance and Mutational Architecture of the Corresponding Genes
Authors: Roca Iria , Fernández-Marmiesse Ana , Gouveia Sofía , Segovia Marta , Couce María L.
Published: May 2018

The biggest challenge geneticists face when applying next-generation sequencing technology to the diagnosis of rare diseases is determining which rare variants, from the dozens or hundreds detected, are potentially implicated in the patient’s phenotype. Thus, variant prioritization is an essential step in the process of rare disease diagnosis. In addition to conducting the usual in-silico analyses to predict variant pathogenicity (based on nucleotide/amino-acid conservation and the differences between the physicochemical features of the amino-acid change), three important concepts should be borne in mind. The first is the “mutation tolerance” of the genes in which variants are located. This describes the susceptibility of a given gene to any functional mutation and depends on the strength of purifying selection acting against it. The second is the “mutational architecture” of each gene. This describes the type and location of mutations previously identified in the gene, and their association with different phenotypes or degrees of severity. The third is the mode of inheritance (inherited vs. de novo) of the variants detected. Here, we discuss the importance of each of these concepts for variant prioritization in the diagnosis of rare diseases. Using real data, we show how genes, rather than variants, can be prioritized by calculating a gene-specific mutation tolerance score. We also illustrate the influence of mutational architecture on variant prioritization using five paradigmatic examples. Finally, we discuss the importance of familial variant analysis as final step in variant prioritization.
Transcriptional Profiles of SmWRKY Family Genes and Their Putative Roles in the Biosynthesis of Tanshinone and Phenolic Acids in Salvia miltiorrhiza
Authors: Yu Haizheng , Guo Wanli , Yang Dongfeng , Hou Zhuoni , Liang Zongsuo
Published: May 2018

Salvia miltiorrhiza Bunge is a Chinese traditional herb for treating cardiovascular and cerebrovascular diseases, and tanshinones and phenolic acids are the dominated medicinal and secondary metabolism constituents of this plant. WRKY transcription factors (TFs) can function as regulators of secondary metabolites biosynthesis in many plants. However, studies on the WRKY that regulate tanshinones and phenolics biosynthesis are limited. In this study, 69 SmWRKYs were identified in the transcriptome database of S. miltiorrhiza, and phylogenetic analysis indicated that some SmWRKYs had closer genetic relationships with other plant WRKYs, which were involved in secondary metabolism. Hairy roots of S. miltiorrhiza were treated by methyl jasmonate (MeJA) to detect the dynamic change trend of SmWRKY, biosynthetic genes, and medicinal ingredients accumulation. Base on those date, a correlation analysis using Pearson’s correlation coefficient was performed to construct gene-to-metabolite network and identify 9 SmWRKYs (SmWRKY1, 7, 19, 29, 45, 52, 56, 58, and 68), which were most likely to be involved in tanshinones and phenolic acids biosynthesis. Taken together, this study has provided a significant resource that could be used for further research on SmWRKY in S. miltiorrhiza and especially could be used as a cue for further investigating SmWRKY functions in secondary metabolite accumulation.
How Exercise and Dietary Intervention Affect the Outcome of Osteosarcopenic Obesity Syndrome?
Authors: JafariNasabian Pegah
Published: May 2018

Osteosarcopenic obesity (OSO) is described as the simultaneous presence of osteopenia/osteoporosis, sarcopenia, and increased adiposity. Over time, older adults with OSO syndrome might be at greater risk for loss of physical function and bone fractures. Furthermore, a sedentary lifestyle, inadequate nutrition, pharmaceutical drugs, and chronic conditions encompass the multifactorial nature of OSO syndrome. Physical activity and a healthy diet play a crucial role in management and treatment of OSO syndrome. Research has shown that even low-intensity physical activity or daily habitual activity can maintain bone mineral density, muscle strength, and improve muscle quality, and reduce adiposity. However, older adults with high risk of fall and injuries require tailored exercise intensity. Also, balanced daily intake of vitamin D, calcium, and protein is important in prevention and treatment of OSO syndrome in postmenopausal women. Effective measurement of bone mass, muscle mass, and strength is required when detecting OSO syndrome and to evaluate the balance, strength and endurance of elder individuals and severity of the condition.
Time-Resolved Spectroscopy of Ethanol Evaporation on Free-Standing Porous Silicon Photonic Microcavities
Authors: Jiménez Vivanco María del Rayo , García Godofredo , Doti Rafael , Faubert Jocelyn , Lugo Arce Jesus Eduardo
Published: May 2018

In this work, we have followed ethanol evaporation at two different concentrations using a fiber optic spectrometer and a screen capture application with a resolving capacity of 10 ms. The transmission spectra are measured in the visible-near-infrared range with a resolution of 0.5 nm. Porous Silicon microcavities were fabricated by electrochemistry etching of crystalline silicon. The microcavities were designed to have a localized mode at 472 nm (blue band). Ethanol infiltration produces a redshift of approximately 17 nm. After a few minutes, a phase change from liquid to vapor occurs and the localized wavelength shifts back to the blue band. This process happens in a time window of only 60 ms. Our results indicate a difference between two distinct ethanol concentrations (70% and 35%). For the lower ethanol concentration, the blue shift rate process is slower in the first 30 ms and then it equals the high ethanol concentration blue shift rate. We have repeated the same process, but in an extended mode (750 nm), and have obtained similar results. Our results show that these photonic structures and with the spectroscopic technique used here can be implemented as a sensor with sufficient sensitivity and selectivity. Finally, since the photonic structure is a membrane, it can also be used as a transducer. For instance, by placing this photonic structure on top of a fast photodetector whose photo-response lies within the same bandwidth, the optical response can be transferred to an electrical signal.
Effect of CNT/PDMS Nanocomposites on the Dynamics of Pioneer Bacterial Communities in the Natural Biofilms of Seawater
Authors: Ji Yubin , Sun Yuan , Lang Yanhe , Wang Lei , Liu Bing , Zhang Zhizhou
Published: May 2018

In this study, the antifouling (AF) performance of different carbon nanotubes (CNTs)-modified polydimethylsiloxane (PDMS) nanocomposites (PCs) was examined directly in the natural seawater, and further analyzed using the Multidimensional Scale Analyses (MDS) method. The early-adherent bacterial communities in the natural biofilms adhering to different PC surfaces were investigated using the single-stranded conformation polymorphism (SSCP) technique. The PCs demonstrated differences and reinforced AF properties in the field, and they were prone to clustering according to the discrepancies within different CNT fillers. Furthermore, most PC surfaces only demonstrated weak modulating effects on the biological colonization and successional process of the early bacterial communities in natural biofilms, indicating that the presence of the early colonized prokaryotic microbes would be one of the primary causes of colonization and deterioration of the PCs. C6 coating seems to be promising for marine AF applications, since it has a strong perturbation effect on pioneer prokaryotic colonization.
Enhancing Thermoelectric Properties through Control of Nickel Interstitials and Phase Separation in Heusler/Half-Heusler TiNi1.1Sn Composites
Authors: Levin Emily E. , Long Francesca , Douglas Jason E. , Buffon Malinda L. C. , Lamontagne Leo K. , Pollock Tresa M. , Seshadri Ram
Published: May 2018

Thermoelectric devices, which allow direct conversion of heat into electrical energy, require materials with improved figures of merit ( z T ) in order to ensure widespread adoption. Several techniques have been proposed to increase the z T of known thermoelectric materials through the reduction of thermal conductivity, including heavy atom substitution, grain size reduction and inclusion of a semicoherent second phase. The goal in these approaches is to reduce thermal conductivity through phonon scattering without modifying the electronic properties. In this work, we demonstrate that Ni interstitials in the half-Heusler thermoelectric TiNiSn can be created and controlled in order to improve physical properties. Ni interstitials in TiNi 1.1 Sn are not thermodynamically stable and, instead, are kinetically trapped using appropriate heat treatments. The Ni interstitials, which act as point defect phonon scattering centers and modify the electronic states near the Fermi level, result in reduced thermal conductivity and enhance the Seebeck coefficient. The best materials tested here, created from controlled heat treatments of TiNi 1.1 Sn samples, display z T = 0.26 at 300 K, the largest value reported for compounds in the Ti–Ni–Sn family.
Graphitized Carbon: A Promising Stable Cathode Catalyst Support Material for Long Term PEMFC Applications
Authors: Mohanta Paritosh Kumar , Regnet Fabian , Jörissen Ludwig
Published: May 2018

Stability of cathode catalyst support material is one of the big challenges of polymer electrolyte membrane fuel cells (PEMFC) for long term applications. Traditional carbon black (CB) supports are not stable enough to prevent oxidation to CO2 under fuel cell operating conditions. The feasibility of a graphitized carbon (GC) as a cathode catalyst support for low temperature PEMFC is investigated herein. GC and CB supported Pt electrocatalysts were prepared via an already developed polyol process. The physical characterization of the prepared catalysts was performed using transmission electron microscope (TEM), X-ray Powder Diffraction (XRD) and inductively coupled plasma optical emission spectrometry (ICP-OES) analysis, and their electrochemical characterizations were conducted via cyclic voltammetry(CV), rotating disk electrode (RDE) and potential cycling, and eventually, the catalysts were processed using membrane electrode assemblies (MEA) for single cell performance tests. Electrochemical impedance spectroscopy (EIS) and scanning electrochemical microscopy (SEM) have been used as MEA diagonostic tools. GC showed superior stability over CB in acid electrolyte under potential conditions. Single cell MEA performance of the GC-supported catalyst is comparable with the CB-supported catalyst. A correlation of MEA performance of the supported catalysts of different Brunauer–Emmett–Teller (BET) surface areas with the ionomer content was also established. GC was identified as a promising candidate for catalyst support in terms of both of the stability and the performance of fuel cell.
The Preparation, Characterization and Formation Mechanism of a Calcium Phosphate Conversion Coating on Magnesium Alloy AZ91D
Authors: Liu Dong , Li Yanyan , Zhou Yong , Ding Yigang
Published: May 2018

The poor corrosion resistance of magnesium alloys is one of the main obstacles preventing their widespread usage. Due to the advantages of lower cost and simplicity in operation, chemical conversion coating has drawn considerable attention for its improvement of the corrosion resistance of magnesium alloys. In this study, a calcium phosphate coating was prepared on magnesium alloy AZ91D by chemical conversion. For the calcium phosphate coating, the effect of processing parameters on the microstructure and corrosion resistance was studied by scanning electron microscope (SEM) and electrochemical methods, and the coating composition was characterized by X-ray diffraction (XRD). The calcium phosphate coating was mainly composed of CaHPO4·2H2O (DCPD), with fewer cracks and pores. The coating with the leaf-like microstructure provided great corrosion resistance to the AZ91D substrate, and was obtained under the following conditions: 20 min, ambient temperature, and no stirring. At the same time, the role of NH4H2PO4 as the coating-forming agent and the acidifying agent in the conversion process was realized, and the formation mechanism of DCPD was discussed in detail in this work.
Characterization of Magnesium Silicate Hydrate (MSH) Gel Formed by Reacting MgO and Silica Fume
Authors: Zhang Tingting , Zou Jing , Wang Baomin , Wu Zhenlin , Jia Yuan , Cheeseman Christopher R.
Published: May 2018

Magnesium silicate hydrate (MSH) gel was formed by reacting magnesium oxide (MgO) with silica fume (SF) in distilled water. The MSH was prepared using a MgO/SF molar ratio of 1.0 (40:60 weight ratio). Samples were analyzed during hydration process up to 300 days at room temperature. The MSH characterization has been carried out using a range of analytical techniques. Quantitative analysis was achieved using thermogravimetric analysis (TG/DTG) with a de-convolution technology. The structure of MSH gel was characterized using solid state nuclear magnetic resonance (29Si NMR) and Fourier transform infrared (FT-IR) spectroscopy. Transmission electron microscopy (TEM) was used to investigate MSH microstructure. Compared with natural magnesium silicate hydrate minerals, the structure of MSH gel is highly disordered and generates on the surface of particles, producing a shell structure with cavity. The molecular structure of MSH phase is layered. The results also show that the extent of polymerization of MSH gel is related to the solution pH during hydration.
Food Modulation Controls Astaxanthin Accumulation in Eggs of the Sea Urchin Arbacia lixula
Authors: Galasso Christian , Orefice Ida , Toscano Alfonso , Vega Fernández Tomás , Musco Luigi , Brunet Christophe , Sansone Clementina , Cirino Paola
Published: May 2018

The carotenoid astaxanthin has strong antioxidant properties with beneficial effects for various degenerative diseases. This carotenoid is produced by some microalgae species when cultivated in particular conditions, and, interestingly, it is a predominant carotenoid in aquatic animals throughout a broad range of taxa. Recently, astaxanthin was detected in the eggs of the sea urchin Arbacia lixula in relevant concentrations when this organism was maintained in culture. These results have paved the way for deeper research into astaxanthin production by this species, particularly in regards to how astaxanthin production can be modulated by diet. Results showed that the highest content of astaxanthin in eggs was observed in sea urchins fed on a diet enriched with Spirulina platensis. This result was confirmed by the high antioxidant activity recorded in the egg extracts of these animals. Our results suggest that (i) the sea urchin A. lixula is able to synthesize astaxanthin from precursors obtained from food, and (ii) it is possible to modulate the astaxanthin accumulation in sea urchin eggs by modifying the proportions of different food ingredients provided in their diet. This study demonstrates the large potential of sea urchin cultivation for the eco-sustainable production of healthy supplements for nutraceutical applications.
3D Shape Reconstruction of 3D Printed Transparent Microscopic Objects from Multiple Photographic Images Using Ultraviolet Illumination
Authors: Koyama Keishi , Takakura Masayuki , Furukawa Taichi , Maruo Shoji
Published: May 2018

We propose and demonstrate a simple, low-cost, three-dimensional (3D) shape acquisition method for transparent 3D printed microscopic objects. Our method uses ultraviolet (UV) illumination to obtain high-contrast silhouette images of transparent 3D printed polymer objects. Multiple silhouette images taken from different viewpoints make it possible to reconstruct the 3D shape of this transparent object. A 3D shape acquisition system consisting of a UV light-emitting diode, charge-coupled device camera and a rotation stage was constructed and used to successfully reconstruct the 3D shape of a transparent bunny model produced using micro-stereolithography. In addition, 3D printed pillar array models, with different diameters on the order of several hundred micrometers, were reconstructed. This method will be a promising tool for the 3D shape reconstruction of transparent 3D objects on both the micro- and macro-scale by changing the imaging lens.
Electromagnetic Regulation of Electrolyte Solution Heat Convection in Microchannels
Authors: Song Miaomiao , Chi Xiaoting , Wang Yahui , Ma Yu
Published: May 2018

With the rapid development of microelectronics and micro-electromechanical system technology, the electronic components have become smaller and the performance has become higher. Under this condition, however, their energy consumption and heat production have also increased continuously, which poses a great challenge to heat dissipation. In this paper, electromagnetic driving technology is applied to drive the electrolyte solution flow within a microchannel to realize efficient heat convection with microchannel walls. By changing the magnitude and direction of electric–magnetic field, the regulation of heat convection performance is studied. The results show that the Nu number of microchannel increases as the Ha number and magnetic direction angle increases, while it decreases as the potential difference increases. According to the average index of the four factors, it was determined that the electrolyte solution had the best heat convection performance with Ha = 0.05, Vb = 0.00006, Pe = 90, and α = 90°. After that, sensitivity analysis of the Ha number, potential difference and magnetic direction angle was used to regulate the heat convection performance. This paper may provide some theoretical support for the design of microelectronics and micro-electromechanical systems.
Approximate Solution for Electroosmotic Flow of Power-Law Fluids in a Planar Microchannel with Asymmetric Electrochemical Boundary Conditions
Authors: Choi WooSeok , Yun Sungchan , Choi Du-Soon
Published: May 2018

Electroosmotic flow (EOF) is widely used in microfluidic systems and chemical analysis. It is driven by an electric force inside microchannel with highly charged boundary conditions. In practical applications, electrochemical boundary conditions are often inhomogeneous because different materials as walls are commonly utilized in routine fabrication methods. In the present study, we focus on the analytic solutions of the EOF generated in a planar microchannel with asymmetric electrochemical boundary conditions for non-Newtonian fluids. The velocity profile and flow rate are approximated by employing the power-law model of fluids in the Cauchy momentum equation. The hydrodynamic features of the EOF under asymmetric zeta potentials are scrutinized as a function of the fluid behavior index of the power-law fluid, thickness of Debye length, and zeta potential ratios between planes. The approximate solutions of the power-law model are comparable to the numerically obtained solutions when the Debye length is small and the fluid behavior index is close to unity. This study provides insights into the electrical control of non-Newtonian fluids, such as biological materials of blood, saliva, and DNA solution, in lab-on-a-chip devices.