bluuebunny/crossref_metadata_2025 huggingface dataset:
Age-group differences in trust-related decision-making and learning
Authors: Horta Marilyn , Shoenfelt Alayna , Lighthall Nichole R. , Perez Eliany , Frazier Ian , Heemskerk Amber , Lin Tian , Wilson Robert C. , Ebner Natalie C.
Published: January 2024

Facial impressions contribute to evaluations of trustworthiness. Older adults are especially vulnerable to trust violations, incurring risks for deception and exploitation. Using the newly developed social Iowa Gambling Task (S-IGT), we examined age-group differences in the impact of facial trustworthiness on decision-making and learning. In the congruent condition (CS-IGT), advantageous decks were paired with trustworthy faces and disadvantageous decks with untrustworthy faces. In the incongruent condition (IS-IGT), this pairing was reversed. Younger (n = 143) and older (n = 129) participants completed either the standard Iowa Gambling Task (IGT), CS-IGT, or IS-IGT. Both age groups preferred trustworthy faces in their initial choices. Older adults performed worse than younger adults across all tasks over time. Further, compared to younger adults, older adults performed worse on the IS-IGT, suggesting that incongruent facial cues interfered with older adults’ performance, which aligns with reduced sensitivity to negative social reputations in aging. Multilevel modeling also indicated that age-group differences were most pronounced across all tasks in the last 40 trials. Together these findings suggest that differences between younger and older adults in experience-dependent decision-making are magnified in social contexts that involve a “wolf in sheep’s clothing,” which may reflect age-related difficulties in integrating incongruent information.
Association with menopausal hormone therapy and asymptomatic gallstones in US women in the third National Health and Nutrition Examination Study
Authors: Jackson Sarah S. , Graubard Barry I. , Gabbi Chiara , Koshiol Jill
Published: January 2024

15% of US adults have gallstones, most of which are clinically “silent”. Several studies show that menopausal hormone therapy (MHT) increases symptomatic gallstones and cholecystectomy risk. MHT use may be contraindicated in women with gallstones and population studies may be biased by “confounding by contraindication” while the true association between MHT and gallstones remains underestimated. We sought to examine whether MHT use was associated with asymptomatic gallstones using instrumental variable (IV) analysis to account for confounding by contraindication. We used 2018 postmenopausal women from the Third National Health and Nutrition Examination Survey to estimate associations of MHT use with asymptomatic gallstones. A traditional logistic regression analysis was compared to instrumental variable (IV) analysis to account for confounding by contraindication. 12% of women with asymptomatic gallstones and 25% of women without gallstones were current MHT users (P < 0.001). The traditional analysis suggested a decreased odds of asymptomatic gallstones in current versus never users (OR 0.58, 95% CI 0.37, 0.89), but increased odds (OR 1.51, 95% CI 0.44, 5.16) in the IV analysis. The traditional analysis consistently underestimated the odds of asymptomatic gallstones with MHT use compared to the IV analysis. Accounting for confounding by contraindication, we found a suggestive, though imprecise, positive association between MHT use and asymptomatic gallstones among postmenopausal women. Failure to consider contraindication can produce incorrect results.
Molecular identification and genotyping of hepatitis E virus from Southern Punjab, Pakistan
Authors: Ali Muhammad Muddassir , Gul Mehek , Imran Muhammad , Ijaz Muhammad , Azeem Shahan , Ullah Arif , Yaqub Hafiz Muhammad Farooq
Published: January 2024

Hepatitis E is a global health concern. Hepatitis E virus (HEV) infection is endemic in Pakistan. HEV has four genotypes: HEV-1 through HEV-4. The genotypes HEV-1 and HEV-2 are associated with infection in humans, especially in countries with poor sanitation. The genotypes HEV-3 and HEV-4 are zoonotic and human infection takes place by consuming undercooked meat or being in contact with animals. The present study was designed to ascertain the presence of HEV in the Southern Punjab region of Pakistan. First, blood samples (n = 50) were collected from patients suspected of infection with the hepatitis E virus from the Multan District. The serum was separated and the samples were initially screened using an HEV IgM-ELISA. Second, the ELISA-positive samples were subjected to PCR and were genetically characterized. For PCR, the RNA extraction and complementary DNA synthesis were done using commercial kits. The HEV ORF2 (Open Reading Frame-2, capsid protein) was amplified using nested PCR targeting a 348 bp segment. The PCR amplicons were sequenced and an evolutionary tree was constructed using MEGA X software. A protein model was built employing the SWISS Model after protein translation using ExPASy online tool. The positivity rate of anti-HEV antibodies in serum samples was found as 56% (28/50). All Pakistani HEV showed homology with genotype 1 and shared common evolutionary origin and ancestry with HEV isolates of genotype 1 of London (MH504163), France (MN401238), and Japan (LC314158). Sequence analysis of motif regions assessment and protein structure revealed that the sequences had a similarity with the reference sequence. These data suggest that genotype 1 of HEV is circulating in Pakistan. This finding could be used for the diagnosis and control of HEV in the specific geographic region focusing on its prevalent genotype.
Subregion and sex differences in ethanol activation of cholinergic and glutamatergic cells in the mesopontine tegmentum
Authors: Mulloy S. M. , Aback E. M. , Gao R. , Engel S. , Pawaskar K. , Win C. , Moua A. , Hillukka L. , Lee A. M.
Published: January 2024

Ethanol engages cholinergic signaling and elicits endogenous acetylcholine release. Acetylcholine input to the midbrain originates from the mesopontine tegmentum (MPT), which is composed of the laterodorsal tegmentum (LDT) and the pedunculopontine tegmental nucleus (PPN). We investigated the effect of acute and chronic ethanol administration on cholinergic and glutamatergic neuron activation in the PPN and LDT in male and female mice. We show that ethanol activates neurons of the PPN and not the LDT in male mice. Chronic 15 daily injections of 2 g/kg ethanol induced Fos expression in cholinergic and glutamatergic PPN neurons in male mice, whereas ethanol did not increase cholinergic and glutamatergic neuronal activation in the LDT. A single acute 4 g/kg injection, but not a single 2 g/kg injection, induced cholinergic neuron activation in the male PPN but not the LDT. In contrast, acute or chronic ethanol at either dose or duration had no effect on the activation of cholinergic or glutamatergic neurons in the MPT of female mice. Female mice had higher baseline level of activation in cholinergic neurons compared with males. We also found a population of co-labeled cholinergic and glutamatergic neurons in the PPN and LDT which were highly active in the saline- and ethanol-treated groups in both sexes. These findings illustrate the complex differential effects of ethanol across dose, time point, MPT subregion and sex.
Exploring the impact of naltrexone on the THBS1/eNOS/NO pathway in osteoporotic bile duct-ligated rats
Authors: Hosseini-Fard Seyed Reza , Etemad-Moghadam Shahroo , Alaeddini Mojgan , Dehpour Ahmad Reza , Emamgholipour Solaleh , Golestani Abolfazl
Published: January 2024

Hepatic osteodystrophy, a prevalent manifestation of metabolic bone disease, can arise in the context of chronic liver disease. The THBS1-eNOS-NO signaling pathway plays a pivotal role in the maturation of osteoclast precursors. This study aimed to investigate the impact of Naltrexone (NTX) on bone loss by examining the THBS1-eNOS-NO signaling pathways in bile duct ligated (BDL) rats. Male Wistar rats were randomly divided into five groups (n = 10 per group): control, sham-operated + normal saline, BDL + normal saline, sham-operated + NTX (10 mg/kg), and BDL + NTX. Parameters related to liver injury were measured at the study's conclusion, and Masson-trichrome staining was employed to evaluate collagen deposition in liver tissue. Bone THBS-1 and endothelial nitric oxide synthase (eNOS) expression levels were measured using real-time PCR, while the level of bone nitric oxide (NO) was assessed through a colorimetric assay. NTX treatment significantly attenuated the BDL-induced increase in circulating levels of liver enzymes and bilirubin. THBS-1 expression levels, elevated after BDL, were significantly suppressed following NTX administration in the BDL + NTX group. Despite no alterations in eNOS expression between groups, the bone NO level, significantly decreased in the BDL group, was significantly reduced by NTX in the BDL + NTX group. This study partly provides insights into the possible molecular mechanisms in BDL-induced osteoporosis and highlights the modulating effect of NTX on these pathways. Further research is needed to establish the impact of NTX on histomorphometric indexes.
M6A plays a potential role in carotid atherosclerosis by modulating immune cell modification and regulating aging-related genes
Authors: Zhao Wenpeng , Xu Yingqi , Zhu Jiabao , Zhang Chaoxuan , Zhou Weimin , Wang Shizhi
Published: January 2024

RNA N6-methyladenosine (m6A) regulators play essential roles in diverse biological processes, including immune responses. Mounting evidence suggests that their dysregulation is intricately linked to numerous diseases. However, the role of m6A-associated genes in carotid atherosclerosis and their relationship with aging and immune cells remain unclear. Analyze the expression profiles of m6A-related genes in carotid atherosclerosis-related datasets. Based on the expression patterns of m6A-related genes, perform consistent clustering analysis of carotid atherosclerosis samples and investigate associated immune cell infiltration patterns and aging characteristics. Develop an m6A prediction model specific to carotid atherosclerosis and analyze the relationships between immune cells infiltration and aging features. The m6A methylation modification level exhibited a substantial decrease in early-stage carotid atherosclerosis samples compared to late-stage carotid atherosclerosis samples. Subsequently, two distinct m6A subtypes were defined through consensus clustering analysis, with the lower m6A modification level group showing associations with heightened immune cell infiltration and increased expression of aging-related genes. A model composed of five m6A-related genes was formulated, and the results indicated that this model possesses effective predictive and therapeutic capabilities for carotid atherosclerosis. Furthermore, the downregulation of YTHDC1 expression resulted in elevated expression of inflammatory factors and a decrease in the expression of the aging-related gene RGN. Single-cell data analysis suggests that the reduced expression of YTHDC1 may decrease the degradation of inflammation-related factors in macrophages, leading to a highly inflammatory state in the carotid artery wall. Furthermore, the sustained release of inflammatory factors may increase the expression of the aging-related gene RGN in vascular smooth muscle cells, further exacerbating the progression of atherosclerosis. A reduced level of m6A methylation modification could enhance inflammation and expedite cellular aging, thereby contributing to the development of carotid atherosclerosis.
Assessment of lower limb muscle strength can predict fall risk in patients with chronic liver disease
Authors: Takada Hitomi , Yamashita Koji , Osawa Leona , Komiyama Yasuyuki , Muraoka Masaru , Suzuki Yuichiro , Sato Mitsuaki , Kobayashi Shoji , Yoshida Takashi , Takano Shinichi , Maekawa Shinya , Enomoto Nobuyuki
Published: January 2024

Falls are caused by a combination of factors, including loss of lower limb muscle strength (LMS), and associated with declined performance status (PS). Age-related sarcopenia is generally associated with decreased muscle mass and strength of lower limb muscle but without a noticeable loss of those of upper limb or trunk muscle. However, no reports have focused on falls or LMS in chronic liver disease (CLD) patients. This study is the first to analyze the risk factors for falls in patients with CLD, focusing on LMS measurement using the Locomoscan. This study enrolled 315 CLD patients whose LMS was measured. The patients who experienced falls more than 1 year ago or during the observation period were classified as those who experienced falls. We found that risk factors for falls were PS1/2 and decreased LMS (< 0.32 N/kg). The group with sarcopenia had a higher frequency of decreased LMS (54 vs. 26%, p = 0.001) and falls (24 vs. 4.4%, p < 0.001) compared to the non-sarcopenia group. This study found that decreased LMS was an independent risk factor for falls. Assessment of LMS may be used as a better marker associated with the risk of falls in patients with CLD.
Association between cataract and fatty liver diseases from a nationwide cross-sectional study in South Korea
Authors: Kang Kyoung Hae , Shin Daeun , Ryu Ik Hee , Kim Jin Kuk , Lee In Sik , Koh Kyungmin , Yoo Tae Keun
Published: January 2024

This study examined the link between fatty liver disease (FLD) and cataracts, as previous research has suggested that FLD may contribute to metabolic syndrome, systemic inflammation, and potentially cataracts. We studied a nationwide cross-sectional cohort of the Fifth Korean National Health and Nutrition Examination Survey 2010–2011. FLD was defined as nonalcoholic FLD (NAFLD) and metabolic dysfunction-associated FLD (MAFLD). Multinomial logistic regression was utilized to investigate the relationship between cataracts and FLD after adjustment for potential confounders. Participants with cataracts had higher liver fibrosis scores, including the NAFLD fibrosis score (NFS;P < 0.001), fibrosis-4 index (FIB4;P < 0.001), and fatty liver index (FLI;P = 0.001). NAFLD was not associated with a higher odds ratio (OR) for cataracts in the fully adjusted model (OR = 1.23,P = 0.058). MAFLD was significantly associated with a higher OR (OR = 1.34,P = 0.006). After adjusting for all factors, the severity of FLD was linked to an increased risk of cataracts, with significant linear trends (Pvalues for linear trends of NFS, FIB4, and FLI < 0.05). After adjusting for well-known cataract risk factors, MAFLD was significantly associated with cataracts. Our analysis suggests that FLD may serve as an independent risk factor for cataracts.
Naturally occurring quercetin and myricetin as potent inhibitors for human ectonucleotide pyrophosphatase/phosphodiesterase 1
Authors: Duangiad Peeradon , Nutho Bodee , Chaijarasphong Thawatchai , Morales Noppawan Phumala , Pongtharangkul Thunyarat , Hamachi Itaru , Ojida Akio , Wongkongkatep Jirarut
Published: January 2024

Ecto-nucleotide pyrophosphatases/phosphodiesterases 1 (ENPP1) is a key enzyme in purinergic signaling pathways responsible for cell-to-cell communications and regulation of several fundamental pathophysiological processes. In this study, Kyoto Green, a rapid chemical sensor of pyrophosphate, was employed to screen for effective ENPP1 inhibitors among five representative flavonoids (quercetin, myricetin, morin, kaempferol, and quercetin-3-glucoside), five nucleosides (adenosine, guanosine, inosine, uridine, and cytidine), and five deoxynucleosides (2′- and 3′-deoxyadenosine, 2′-deoxyguanosine, 2′-deoxyinosine, and 2′-deoxyuridine). Conventional colorimetric, fluorescence, and bioluminescence assays revealed that ENPP1 was effectively inhibited by quercetin (Ki ~ 4 nM) and myricetin (Ki ~ 32 nM) when ATP was used as a substrate at pH 7.4. In silico analysis indicated that the presence of a chromone scaffold, particularly one containing a hydroxyl group at the 3′ position on the B ring, may promote binding to the active site pocket of ENPP1 and enhance inhibition. This study demonstrated that the naturally derived quercetin and myricetin could effectively inhibit ENPP1 enzymatic activity and may offer health benefits in arthritis management.
Practical effects of carbon emissions trading system on energy efficiency
Authors: Li Xue , Cao Aochen , Zhang Yuhan , Zhao Yuting , Chen Lulu , Jiang Pan , Liu Liang
Published: January 2024

The carbon emissions trading system (CETS) is a helpful policy instrument for separating carbon emissions from economic expansion, and it significantly impacts energy efficiency (EE). This study uses 30 Chinese provinces from 2007 to 2020 as its research samples, and classifies energy efficiency into single-factor energy efficiency (SFE) and total-factor energy efficiency (TFE), using the difference-in-differences model to examine the effect and mechanism of the CETS on EE. As an additional tool to assess the efficacy of the CETS, the corresponding evolution of the rebound effect of energy-related carbon emissions (RECE) is also calculated. This study shows that the CETS can significantly improve EE in China's pilot provinces. The influence mechanism indicates that the effect of the CETS on EE is influenced by the level of government governance, green innovation, and industrial structure optimization. Further study finds that after the CETS was carried out, the RECE in pilot provinces was higher than that in non-pilot provinces, and 31.4% of carbon emissions reduced by EE improvement rebounded. Therefore, the CETS has yet to realize its full carbon reduction potential. The study offers specific policy proposals for the enhancement of China's CETS in light of the aforementioned findings.
Entomotherapy as an alternative treatment for diseases due to Gram-negative bacteria in Burkina Faso
Authors: Ouango Mamadou , Cissé Hama , Romba Rahim , Drabo Samuel Fogné , Semdé Rasmané , Savadogo Aly , Gnankiné Olivier
Published: January 2024

Insects are known for their harmful effects. However, they also benefit humans, animals, plants, and ecosystems. Its beneficial uses include entomophagy and entomotherapy. This study aimed to evaluate the antibacterial activity of insect extracts against Gram-negative bacteria. Antibacterial activities of thirteen crude extracts of medicinal insects were tested against twelve Gram-negative bacteria by diffusion on agar. Imipenem was used as an antibiotic for positive control. The thirteen extracts acted differently against certain Gram-negative bacteria. The largest inhibition diameter was for extracts of Cirina butyrospermi and Mylabris variabilis against Pseudomonas aeruginosa ATCC27853 and Salmonella enteritidis ATCC13076, respectively. The diameters of inhibition obtained using imipenem against these same bacterial strains were 13.0 ± 0.0 mm and 22 ± 1.0 mm, respectively. The lowest inhibition diameter (7.5 ± 0.0 mm) was obtained using Anopheles gambiae extract against Salmonella Typhimurium ATCC14028. Imipenem was active on all strains tested. The highest values of the index multi-resistance to insect’s extracts were reported for Pseudomonas aeruginosa ATCC9027 and Serratia odorifera 652411. Overall, the results of this study confirmed the antibacterial activities of insects used by traditional health practitioners to treat different pathologies. Entomotherapy could be an alternative treatment for certain infectious pathologies caused by gram-negative bacteria.
Highly selective and sensitive recognition of multi-ions in aqueous solution based on polymer-grafted nanoparticle as visual colorimetric sensor
Authors: Heidari Bahareh , Zarshenas Pourya , Sedghi Roya , Nabid Mohammad Reza , Varma Rajender S.
Published: January 2024

A novel, selective and sensitive colorimetric sensor for naked-eye detection and adsorption of multi-ions in aqueous solution was synthesized using hybridization of organic–inorganic phase. The polymer-grafted nanoparticles (PGNPs) was synthesized via atom transfer radical polymerization (ATRP) of monomers on modified TiO2 NPs and applied under optimized conditions for naked-eye detection: sensor mass: 15 mg; response time: 30 s with limits of detection (LODs) as small as 10, 1, 0.5, and 1 ppb Hg (II), Cd (II), Cu (II), and UO2 (II) at pH = 8, 9, 6, and 7, respectively. The efficient selectivity of the naked eye sensor to multi-ions in the presence of various ions was affirmed wherein the color of the chemosensor in the presence of Hg (II), Cd (II), Cu (II), and UO2 (II) shifted from gray to violet, orange, green and yellow, respectively. The salient advantages of this method comprise expeditious, selectable, high reproducibility, with reasonable adsorption capacity (133 mg g-1) and inexpensive nature for rapid detection of heavy metal ions contamination in aqueous solution in an inexpensive manner. The adsorption mechanism was studied via adsorption kinetics and adsorption isotherm models and the accuracy of the chemosensor has been confirmed and supported by XRD, FT-IR, TGA, 1H-NMR, SEM, TEM, EDX mapping, DLS, BET, and EDS analysis.
Effects of poly (ADP-ribose) polymerase inhibitor treatment on the repair process of ischemic acute kidney injury
Authors: Jeon Junseok , Lee Kyungho , Jang Hye Ryoun , Yang Kyeong Eun , Lee Cheol-Jung , Ahn Hyeonju , Park Woong-Yang , Lee Jung Eun , Kwon Ghee Young , Kim Yoon-Goo , Huh Wooseong
Published: January 2024

Excessive activation of poly (ADP-ribose) polymerase (PARP) contributes to ischemic acute kidney injury (AKI). PARP inhibition has been shown to be beneficial in renal ischemia–reperfusion injury (IRI) in the early phase, but its role in the repair process remains unclear. The effects of JPI-289, a novel PARP inhibitor, during the healing phase after renal IRI were investigated. IRI was performed on 9-week-old male C57BL/6 mice. Saline or JPI-289 100 mg/kg was intraperitoneally administered once at 24 h or additionally at 48 h after IRI. Hypoxic HK-2 cells were treated with JPI-289. Renal function and fibrosis extent were comparable between groups. JPI-289 treatment caused more prominent tubular atrophy and proinflammatory intrarenal leukocyte phenotypes and cytokines/chemokines changes at 12 weeks after unilateral IRI. JPI-289 treatment enhanced gene expressions associated with collagen formation, toll-like receptors, and the immune system in proximal tubules and endothelial cells after IRI. JPI-289 treatment at 3 or 6 h after hypoxia facilitated proliferation of hypoxic HK-2 cells, whereas further treatment after 24 h suppressed proliferation. Delayed inhibition of PARP after renal IRI did not facilitate the repair process during the early healing phase but rather may aggravate renal tubular atrophy during the late healing phase in ischemic AKI.
Experimental study on alkali reduction of film-coated porous ecological concrete by microbial calcium carbonate precipitation technology
Authors: Wang Bingxia , Yang Bo , Wang Lu , Lian Bo , Wu Xiaolei
Published: January 2024

Some plants do not grow due to the high pH levels of ecological concrete pore solutions. In this paper, we design and build an integrated device featuring a combined microbial film and a transverse/U-shaped grouting film. We have applied to the China Intellectual Property Office for an invention patent on this device. The device overcomes the blockage of the grouting port caused by microbial and vertical grouting. The vertical grouting tube leaves holes inside a specimen, reducing the compressive strength, while the integrated device optimizes and decreases variation in the recycling of microbial bacteria. The reduction in the pore alkalinity of porous ecological concrete resulting from the microbial grouting film of this device is larger than that resulting from a microbial sprayed film. The pH values of porous ecological concrete with microbial grouting films and microbial sprayed films are obtained by the pure slurry soaking method and solid–liquid extraction method, respectively. The pH value is lower for the film obtained by the pure slurry soaking method than for that obtained by the solid–liquid extraction method. Conversely, the pH value of porous ecological concrete with a microbial grouting film is reduced to approximately 8 at an age of 56 days. The compressive strengths of the porous ecological concrete specimens with the two films are almost the same. The results of this study provide the necessary theoretical basis for developing alkali reduction technology for porous ecological concrete with environmental and economic benefits.
Discrimination of missing data types in metabolomics data based on particle swarm optimization algorithm and XGBoost model
Authors: Yuan Yang , Du Jianqiang , Luo Jigen , Zhu Yanchen , Huang Qiang , Zhang Mengting
Published: January 2024

In the field of data analysis, it is often faced with a large number of missing values, especially in metabolomics data, this problem is more prominent. Data imputation is a common method to deal with missing metabolomics data, while traditional data imputation methods usually ignore the differences in missing types, and thus the results of data imputation are not satisfactory. In order to discriminate the missing types of metabolomics data, a missing data classification model (PX-MDC) based on particle swarm algorithm and XGBoost is proposed in this paper. First, the missing values in a given missing data set are obtained by panning the missing values to obtain the largest subset of complete data, and then the particle swarm algorithm is used to search for the concentration threshold of missing data and the proportion of low concentration deletions as a percentage of overall deletions. Next, the missing data are simulated based on the search results. Finally, the training data are trained using the XGBoost model using the feature set proposed in this paper in order to build a classifier for the missing data. The experimental results show that the particle swarm algorithm is able to match the traditional enumeration method in terms of accuracy and significantly reduce the search time in concentration threshold search. Compared with the current mainstream methods, the PX-MDC model designed in this paper exhibits higher accuracy and is able to distinguish different deletion types for the same metabolite. This study is expected to make an important breakthrough in metabolomics data imputation and provide strong support for research in related fields.
In-vivo studies of targeted and localized cancer drug release from microporous poly-di-methyl-siloxane (PDMS) devices for the treatment of triple negative breast cancer
Authors: Eluu S. C. , Obayemi J. D. , Salifu A. A. , Yiporo D. , Oko A. O. , Aina T. , Oparah J. C. , Ezeala C. C. , Etinosa P. O. , Ugwu C. M. , Esimone C. O. , Soboyejo W. O.
Published: January 2024

Triple-negative breast cancer (TNBC) treatment is challenging and frequently characterized by an aggressive phenotype and low prognosis in comparison to other subtypes. This paper presents fabricated implantable drug-loaded microporous poly-di-methyl-siloxane (PDMS) devices for the delivery of targeted therapeutic agents [Luteinizing Hormone-Releasing Hormone conjugated paclitaxel (PTX-LHRH) and Luteinizing Hormone-Releasing Hormone conjugated prodigiosin (PG-LHRH)] for the treatment and possible prevention of triple-negative cancer recurrence. In vitro assessment using the Alamar blue assay demonstrated a significant reduction (p < 0.05) in percentage of cell growth in a time-dependent manner in the groups treated with PG, PG-LHRH, PTX, and PTX-LHRH. Subcutaneous triple-negative xenograft breast tumors were then induced in athymic female nude mice that were four weeks old. Two weeks later, the tumors were surgically but partially removed, and the device implanted. Mice were observed for tumor regrowth and organ toxicity. The animal study revealed that there was no tumor regrowth, six weeks post-treatment, when the LHRH targeted drugs (LHRH-PTX and LHRH-PGS) were used for the treatment. The possible cytotoxic effects of the released drugs on the liver, kidney, and lung are assessed using quantitative biochemical assay from blood samples of the treatment groups. Ex vivo histopathological results from organ tissues showed that the targeted cancer drugs released from the implantable drug-loaded device did not induce any adverse effect on the liver, kidneys, or lungs, based on the results of qualitative toxicity studies. The implications of the results are discussed for the targeted and localized treatment of triple negative breast cancer.
Surface and underwater human pose recognition based on temporal 3D point cloud deep learning
Authors: Wang Haijian , Wu Zhenyu , Zhao Xuemei
Published: January 2024

Airborne surface and underwater human pose recognition are crucial for various safety and surveillance applications, including the detection of individuals in distress or drowning situations. However, airborne optical cameras struggle to achieve simultaneous imaging of the surface and underwater because of limitations imposed by visible-light wavelengths. To address this problem, this study proposes the use of light detection and ranging (LiDAR) to simultaneously detect humans on the surface and underwater, whereby human poses are recognized using a neural network designed for irregular data. First, a temporal point-cloud dataset was constructed for surface and underwater human pose recognition to enhance the recognition of comparable movements. Subsequently, radius outlier removal (ROR) and statistical outlier removal (SOR) were employed to alleviate the impact of noise and outliers in the constructed dataset. Finally, different combinations of secondary sampling methods and sample sizes were tested to improve recognition accuracy using PointNet++. The experimental results show that the highest recognition accuracy reached 97.5012%, demonstrating the effectiveness of the proposed human pose detection and recognition method.
New classification of industrial robotic gripping systems for sustainable production
Authors: Ivanov Vitalii , Andrusyshyn Vladyslav , Pavlenko Ivan , Pitel’ Jan , Bulej Vladimir
Published: January 2024

Robotics is an overarching trend in modern high-tech production, contributing significantly to automation. They are used in various industries to perform multiple tasks, and their number is constantly growing. Robots interact with the production object with the help of gripping systems, which are an essential component of industrial robots and manipulators designed for reliable grasping. Therefore, the process of design and rational selection of grippers for considering production conditions receives considerable attention worldwide. The article offers a comprehensive approach to the design of gripper systems as an integral element of the “gripping system – part – environment – production equipment” system to ensure further rational selection considering specific production conditions. A scientific approach to assessing the design of gripping systems was proposed to systematize knowledge in designing gripping systems. In the paper, the principal structural scheme of the robotic gripping system was developed, and the purpose of elements and design requirements were determined. Also, the sequence of stages in the process of selecting the elements of the gripping system has been proposed. The comprehensive system “gripping system – part – environment – production equipment” has been identified considering the mutual influence of structural elements. This work may be helpful to engineers and researchers while designing new gripping systems or selecting the most suitable one from the database. It can improve the rational selection of the element base and the structure of the gripping system by systematizing the experience in the gripper system design. Moreover, due to modern trends in automation and digitalization, the presented classification and coding system for gripping systems can be used in Computer Aided Process Planning and Computer Aided Gripping Systems Design systems. It can help to realize the approach “from the part geometry to the gripping systems design”. Also, it will ensure the production planning stage’s effectiveness due to reducing the time for robotic gripping systems’ design and increasing production safety, flexibility, autonomy, and performance.
Filling knowledge gaps related to AmpC-dependent β-lactam resistance in Enterobacter cloacae
Authors: Barceló Isabel M. , Escobar-Salom María , Jordana-Lluch Elena , Torrens Gabriel , Oliver Antonio , Juan Carlos
Published: January 2024

Enterobacter cloacae starred different pioneer studies that enabled the development of a widely accepted model for the peptidoglycan metabolism-linked regulation of intrinsic class C cephalosporinases, highly conserved in different Gram-negatives. However, some mechanistic and fitness/virulence-related aspects of E. cloacae choromosomal AmpC-dependent resistance are not completely understood. The present study including knockout mutants, β-lactamase cloning, gene expression analysis, characterization of resistance phenotypes, and the Galleria mellonella infection model fills these gaps demonstrating that: (i) AmpC enzyme does not show any collateral activity impacting fitness/virulence; (ii) AmpC hyperproduction mediated by ampD inactivation does not entail any biological cost; (iii) alteration of peptidoglycan recycling alone or combined with AmpC hyperproduction causes no attenuation of E. cloacae virulence in contrast to other species; (iv) derepression of E. cloacae AmpC does not follow a stepwise dynamics linked to the sequential inactivation of AmpD amidase homologues as happens in Pseudomonas aeruginosa; (v) the enigmatic additional putative AmpC-type β-lactamase generally present in E. cloacae does not contribute to the classical cephalosporinase hyperproduction-based resistance, having a negligible impact on phenotypes even when hyperproduced from multicopy vector. This study reveals interesting particularities in the chromosomal AmpC-related behavior of E. cloacae that complete the knowledge on this top resistance mechanism.
Synchronization of non-smooth chaotic systems via an improved reservoir computing
Authors: Wu Guyue , Tang Longkun , Liang Jianli
Published: January 2024

The reservoir computing (RC) is increasingly used to learn the synchronization behavior of chaotic systems as well as the dynamical behavior of complex systems, but it is scarcely applied in studying synchronization of non-smooth chaotic systems likely due to its complexity leading to the unimpressive effect. Here proposes a simulated annealing-based differential evolution (SADE) algorithm for the optimal parameter selection in the reservoir, and constructs an improved RC model for synchronization, which can work well not only for non-smooth chaotic systems but for smooth ones. Extensive simulations show that the trained RC model with optimal parameters has far longer prediction time than those with empirical and random parameters. More importantly, the well-trained RC system can be well synchronized to its original chaotic system as well as its replicate RC system via one shared signal, whereas the traditional RC system with empirical or random parameters fails for some chaotic systems, particularly for some non-smooth chaotic systems.
Whole‑exome sequencing reveals Lewis lung carcinoma is a hypermutated Kras/Nras–mutant cancer with extensive regional mutation clusters in its genome
Authors: He Quan , Sun Cuirong , Pan Yuanjiang
Published: January 2024

Lewis lung carcinoma (LLC), as a widely used preclinical cancer model, has still not been genetically and genomically characterized. Here, we performed a whole–exome sequencing analysis on the LLC cell line to elucidate its molecular characteristics and etiologies. Our data showed that LLC originated from a male mouse belonging to C57BL/6L (a transitional strain between C57BL/6J and C57BL/6N) and contains substantial somatic SNV and InDel mutations (> 20,000). Extensive regional mutation clusters are present in its genome, which were caused mainly by the mutational processes underlying the SBS1, SBS5, SBS15, SBS17a, and SBS21 signatures during frequent structural rearrangements. Thirty three deleterious mutations are present in 30 cancer genes including Kras, Nras, Trp53, Dcc, and Cacna1d. Cdkn2a and Cdkn2b are biallelically deleted from the genome. Five pathways (RTK/RAS, p53, cell cycle, TGFB, and Hippo) are oncogenically deregulated or affected. The major mutational processes in LLC include chromosomal instability, exposure to metabolic mutagens, spontaneous 5–methylcytosine deamination, defective DNA mismatch repair, and reactive oxygen species. Our data also suggest that LLC is a lung cancer similar to human lung adenocarcinoma. This study lays a molecular basis for the more targeted application of LLC in preclinical research.
Introducing a portable electrochemical biosensor for Mycobacterium avium subsp. paratuberculosis detection using graphene oxide and chitosan
Authors: Naghshgar Nahid , Hosseinzadeh Saied , Derakhshandeh Abdollah , Shaali Ruhollah , Doroodmand Mohammad Mahdi
Published: January 2024

In this contribution, a novel, low-cost, high throughput, and ultra-selective electrochemical DNA nanobiosensor was developed for accurate on-site detection of Mycobacterium avium subspecies paratuberculosis (MAP) in real media for practical diagnosis of Johne's disease (JD). The method was designed based on the immobilization of graphene oxide and chitosan biopolymer on the surface of a glassy carbon electrode, modified by electrochemical immobilization of graphene oxide and chitosan biopolymer, followed by activation of biopolymer via 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide hydrochloride and N-hydroxy succinimide (EDC/NHS) coupling system. Afterward, the commercial probe DNA (ssDNA) was stabilized on the activated electrode surface to prepare an ultra-selective ssDNA-stabilized nanobiosensor for MAP sensing called “ssDNA-stabilized GO-CH-EDC/NHS-modified electrode”. Several characterization methods distinguished the bioelectrode. The DNA hybridization between the nanobiosensor and target DNA was confirmed by cyclic voltammetry and differential pulse voltammetry. "At optimal experimental conditions, the nanobiosensor showed a linear range of 1.0 × 10−15–1.0 × 10−12 mol L−1, a detection limit as low as 1.53 × 10−13 mol L−1, and a repeatability with a relative standard deviation (%RSD) of 4.7%. The reproducibility was also appropriate, with a %RSD of about 10%. It was used to diagnose MAP in real samples with highly accurate results. Therefore, the developed nanobiosensor can be used for clinical diagnosis of MAP.
Evaluating sheep hemoglobins with MD simulations as an animal model for sickle cell disease
Authors: Kuczynski Caroline E. , Porada Christopher D. , Atala Anthony , Cho Samuel S. , Almeida-Porada Graça
Published: January 2024

Sickle cell disease (SCD) affects millions worldwide, yet there are few therapeutic options. To develop effective treatments, preclinical models that recapitulate human physiology and SCD pathophysiology are needed. SCD arises from a single Glu-to-Val substitution at position 6 in the β subunit of hemoglobin (Hb), promoting Hb polymerization and subsequent disease. Sheep share important physiological and developmental characteristics with humans, including the same developmental pattern of fetal to adult Hb switching. Herein, we investigated whether introducing the SCD mutation into the sheep β-globin locus would recapitulate SCD’s complex pathophysiology by generating high quality SWISS-MODEL sheep Hb structures and performing MD simulations of normal/sickle human (huHbA/huHbS) and sheep (shHbB/shHbS) Hb, establishing how accurately shHbS mimics huHbS behavior. shHbS, like huHbS, remained stable with low RMSD, while huHbA and shHbB had higher and fluctuating RMSD. shHbB and shHbS also behaved identically to huHbA and huHbS with respect to β2-Glu6 and β1-Asp73 (β1-Asn72 in sheep) solvent interactions. These data demonstrate that introducing the single SCD-causing Glu-to-Val substitution into sheep β-globin causes alterations consistent with the Hb polymerization that drives RBC sickling, supporting the development of a SCD sheep model to pave the way for alternative cures for this debilitating, globally impactful disease.
Fringe-fields-modulated double-gate tunnel-FET biosensor
Authors: Chahardah Cherik Iman , Mohammadi Saeed
Published: January 2024

This paper aims to evaluate a groundbreaking bio-TFET that utilizes the fringe fields capacitance concept to detect neutral and charged biomolecules. While facilitating fabrication process and scalability, this innovative bio-TFET is able to rival the conventional bio-TFET which relies on carving cavities in the gate oxide. The cavities of the proposed device are carved in the spacers over the source region and in the vicinity of the gate metal. Inserting biomolecules in the cavities of our bio-TFET modifies the fringe fields arising out of the gate metal. As a result, these spacers modulate tunneling barrier width at the source-channel tunneling junction. We have assessed our proposed device’s DC/RF performance using the calibrated Silvaco ATLAS device simulator. For further evaluation of the reliability of our bio-TFET, non-idealities, such as trap-assisted tunneling and temperature, are also studied. The device we propose is highly suitable for biosensing applications, as evidenced by the parameters of $${S}_{{I}_{ds}}$$

S

I

ds

= 1.21 × 103, SSS = 0.365, and $${S}_{{f}_{T}}$$

S

f
T

= 1.63 × 103 at VGS = 1 V.
Measurements of the flow of a liquid–solid mixture/suspension through a segmented orifice
Authors: Heronimczak Marcin , Mrowiec Andrzej , Rząsa Mariusz , Koszela Krzysztof
Published: January 2024

The paper attempts to solve the metrological problem that occurs when measuring the intensity of a flowing fluid with suspended solids with densities greater and less than the density of the fluid. The issue of the possibility of self-cleaning of a prototype variant of a segmented orifice from floating solid particles forming mixture/suspensions is discussed. For spherical particles of solids calculations have been made to allow for determining a borderline between their floating and entrainment by the flow, based on dimensionless numbers: Archimedes number and Reynolds number. Experimental tests and CFD simulations were conducted with a variable flow determined by Reynolds number for comparable segmental orifices with orifice module m = 0.102. Flow characteristics were plotted. Based on the results obtained from numerical simulations, positive influence of the inclination of skew segmental orifice downflow plane was presented. The results obtained from the study are a guideline for planning further studies to expand the knowledge of segmented orifices with inclined inflow plane.
Impact of battery electric vehicle usage on air quality in three Chinese first-tier cities
Authors: Lyu Wenjing , Hu Ying , Liu Jin , Chen Kaizhe , Liu Peng , Deng Junjun , Zhang Shaojun
Published: January 2024

China, the world leader in automobile production and sales, confronts the challenge of transportation emissions, which account for roughly 10% of its total carbon emissions. This study, utilizing real-world vehicle data from three major Chinese cities, assesses the impact of Battery Electric Vehicles (BEVs) on air quality. Our analysis reveals that BEVs, when replacing gasoline vehicles in their operational phase, significantly reduce emissions, with reductions ranging from 8.72 to 85.71 kg of CO2 per vehicle monthly. The average monthly reduction rate is 9.47%, though this effect is less pronounced during winter. Advanced BEVs, characterized by higher efficiency and newer technology, exhibit greater emission reduction benefits. While private BEVs generally contribute positively to environmental outcomes, taxi BEVs, due to their intensive usage patterns, show less environmental advantage and may sometimes worsen air quality. Looking ahead, we project substantial emission reductions from the replacement of gasoline vehicles with electric alternatives over the next decade. Policymakers are urged to adopt proactive measures, focusing on promoting medium to large electric vehicles and fostering the use of private and ride-hailing electric vehicles.
Tailoring visible-light active TiO2/cellulose nanocomposites with controlled crystalline structure for enhanced photocatalytic performance
Authors: Pimsawat Nutsupa , Theerakulpisut Somnuk , Kamwilaisak Khanita
Published: January 2024

This work involves a green and simple synthesis of TiO2 nanoparticles on cellulose under mild conditions without the need for calcination via hydrolysis of titanium oxysulfate (TiOSO4). The synthesis conditions, such as sulfuric acid concentration (0–10% wt), temperature (70–90 ℃), and time (4–8 h), focused on precisely controlling the structure of TiO2 to enhance its photocatalytic effectiveness under visible light. At a lower 2.5 wt% sulfuric acid concentration, pure anatase was formed on the cellulose, while an increase in the range of 5.0–7.5 wt% sulfuric acid concentration yielded a rutile phase, resulting in a mixed phase of anatase and rutile on the cellulose. The pure rutile phase was found at a low temperature (70 ℃), while increased temperature led to the formation of the anatase phase. These results confirmed that the formation of crystalline TiO2 phase on the cellulose depended on sulfuric acid concentration and temperature for hydrolysis. Additionally, the photocatalytic properties of the obtained materials were evaluated by degradationvisible of Rhodamine B (RhB) under UV and visible light. The findings revealed that the mixed phase (anatase/rutile) of TiO2 on the cellulose demonstrated a superior photocatalytic efficiency (99.2%) compared to pure anatase (85.75%) and rutile (75.08%) when exposed to visible light.
Direct observation of single-atom defects in monolayer two-dimensional materials by using electron ptychography at 200 kV acceleration voltage
Authors: Chen Ying , Chou Tzu-Chieh , Fang Ching-Hsing , Lu Cheng-Yi , Hsiao Chien-Nan , Hsu Wei-Ting , Chen Chien-Chun
Published: January 2024

Electron ptychography has emerged as a popular technology for high-resolution imaging by combining the high coherence of electron sources with the ultra-fast scanning electron coil. However, the limitations of conventional pixelated detectors, including poor dynamic range and slow data readout speeds, have posed restrictions in the past on conducting electron ptychography experiments. We used the Gatan STELA pixelated detector to capture sequential diffraction data of monolayer two-dimensional (2D) materials for ptychographic reconstruction. By using the pixelated detector and electron ptychography, we demonstrate the observation of the radiation damage at atomic resolution in Transition Metal Dichalcogenides (TMDs).
Integrating field- and remote sensing data to perceive species heterogeneity across a climate gradient
Authors: Chaurasia Amrita N. , Parmar Reshma M. , Dave Maulik G. , Krishnayya N. S. R.
Published: January 2024

Tropical forests exhibit significant diversity and heterogeneity in species distribution. Some tree species spread abundantly, impacting the functional aspects of communities. Understanding how these facets respond to climate change is crucial. Field data from four protected areas (PAs) were combined with high-resolution Airborne Visible/InfraRed Imaging Spectrometer-Next Generation (AVIRIS-NG) datasets to extract large-scale plot data of abundant species and their functional traits. A supervised component generalized linear regression (SCGLR) model was used to correlate climate components with the distribution of abundant species across PAs. The recorded rainfall gradient influenced the proportion of PA-specific species in the observed species assemblages. Community weighted means (CWMs) of biochemical traits showed better correlation values (0.85–0.87) between observed and predicted values compared to biophysical traits (0.52–0.79). The model-based projection revealed distinct distribution responses of each abundant species to the climate gradient. Functional diversity and functional traits maps highlighted the interplay between species heterogeneity and climate. The appearance dynamics of abundant species in dark diversity across PAs demonstrated their assortment strategy in response to the climate gradient. These observations can significantly aid in the ecological management of PAs exposed to climate dynamics.