bluuebunny/crossref_metadata_2025 huggingface dataset:
Biotransformation and Detoxification of Xylidine Orange Dye Using Immobilized Cells of Marine-Derived Lysinibacillus sphaericus D3
Authors: Devi Prabha , Wahidullah Solimabi , Sheikh Farhan , Pereira Rochelle , Narkhede Niteen , Amonkar Divya , Tilvi Supriya , Meena Ram
Published: February 2017

Lysinibacillus sphaericus D3 cell-immobilized beads in natural gel sodium alginate decolorized the xylidine orange dye 1-(dimethylphenylazo)-2-naphthol-6-sulfonic acid sodium salt in the laboratory. Optimal conditions were selected for decolorization and the products formed were evaluated for toxicity by disc diffusion assay against common marine bacteria which revealed the non-toxic nature of the dye-degraded products. Decolorization of the brightly colored dye to colorless products was measured on an Ultra Violet-Vis spectrophotometer and its biodegradation products monitored on Thin Layer Chromatographic plate and High Performance Liquid Chromatography (HPLC). Finally, the metabolites formed in the decolorized medium were characterized by mass spectrometry. This analysis confirms the conversion of the parent molecule into lower molecular weight aromatic phenols and sulfonic acids as the final products of biotransformation. Based on the results, the probable degradation products of xylidine orange were naphthol, naphthylamine-6-sulfonic acid, 2-6-dihydroxynaphthalene, and bis-dinaphthylether. Thus, it may be concluded that the degradation pathway of the dye involved (a) reduction of its azo group by azoreductase enzyme (b) dimerization of the hydrazo compound followed by (c) degradation of monohydrazo as well as dimeric metabolites into low molecular weight aromatics. Finally, it may be worth exploring the possibility of commercially utilizing L. sphaericus D3 for industrial applications for treating large-scale dye waste water.
Determination of the Halogenated Skeleton Constituents of the Marine Demosponge Ianthella basta
Authors: Ueberlein Susanne , Machill Susanne , Schupp Peter , Brunner Eike
Published: February 2017

Demosponges of the order Verongida such as Ianthella basta exhibit skeletons containing spongin, a collagenous protein, and chitin. Moreover, Verongida sponges are well known to produce bioactive brominated tyrosine derivatives. We recently demonstrated that brominated compounds do not only occur in the cellular matrix but also in the skeletons of the marine sponges Aplysina cavernicola and I. basta. Further investigations revealed the amino acid composition of the skeletons of A. cavernicola including the presence of several halogenated amino acids. In the present work, we investigated the skeletal amino acid composition of the demosponge I. basta, which belongs to the Ianthellidae family, and compared it with that of A. cavernicola from the Aplysinidae family. Seventeen proteinogenic and five non-proteinogenic amino acids were detected in I. basta. Abundantly occurring amino acids like glycine and hydroxyproline show the similarity of I. basta and A. cavernicola and confirm the collagenous nature of their sponging fibers. We also detected nine halogenated tyrosines as an integral part of I. basta skeletons. Since both sponges contain a broad variety of halogenated amino acids, this seems to be characteristic for Verongida sponges. The observed differences of the amino acid composition confirm that spongin exhibits a certain degree of variability even among the members of the order Verongida.
Immunomodulatory and Anti-IBDV Activities of the Polysaccharide AEX from Coccomyxa gloeobotrydiformis
Authors: Guo Qiang , Shao Qiang , Xu Wenping , Rui Lei , Sumi Ryo , Eguchi Fumio , Li Zandong
Published: February 2017

A number of polysaccharides have been reported to show immunomodulatory and antiviral activities against various animal viruses. AEX is a polysaccharide extracted from the green algae, Coccomyxa gloeobotrydiformis. The aim of this study was to examine the function of AEX in regulating the immune response in chickens and its capacity to inhibit the infectious bursal disease virus (IBDV), to gain an understanding of its immunomodulatory and antiviral ability. Here, preliminary immunological tests in vitro showed that the polysaccharide AEX can activate the chicken peripheral blood molecular cells’ (PBMCs) response by inducing the production of cytokines and NO, promote extracellular antigen presentation but negatively regulate intracellular antigen presentation in chicken splenic lymphocytes, and promote the proliferation of splenic lymphocytes and DT40 cells. An antiviral analysis showed that AEX repressed IBDV replication by the deactivation of viral particles or by interfering with adsorption in vitro and reduced the IBDV viral titer in the chicken bursa of Fabricius. Finally, in this study, when AEX was used as an adjuvant for the IBDV vaccine, specific anti-IBDV antibody (IgY, IgM, and IgA) titers were significantly decreased. These results indicate that the polysaccharide AEX may be a potential alternative approach for anti-IBDV therapy and an immunomodulator for the poultry industry. However, more experimentation is needed to find suitable conditions for it to be used as an adjuvant for the IBDV vaccine.
Recursive Alterations of the Relationship between Simple Membrane Geometry and Insertion of Amphiphilic Motifs
Authors: Madsen Kenneth , Herlo Rasmus
Published: February 2017

The shape and composition of a membrane directly regulate the localization, activity, and signaling properties of membrane associated proteins. Proteins that both sense and generate membrane curvature, e.g., through amphiphilic insertion motifs, potentially engage in recursive binding dynamics, where the recruitment of the protein itself changes the properties of the membrane substrate. Simple geometric models of membrane curvature interactions already provide prediction tools for experimental observations, however these models are treating curvature sensing and generation as separated phenomena. Here, we outline a model that applies both geometric and basic thermodynamic considerations. This model allows us to predict the consequences of recursive properties in such interaction schemes and thereby integrate the membrane as a dynamic substrate. We use this combined model to hypothesize the origin and properties of tubular carrier systems observed in cells. Furthermore, we pinpoint the coupling to a membrane reservoir as a factor that influences the membrane curvature sensing and generation properties of local curvatures in the cell in line with classic determinants such as lipid composition and membrane geometry.
Hot Deformation Behavior of As-Cast 30Cr2Ni4MoV Steel Using Processing Maps
Authors: Zhou Peng , Ma Qingxian , Luo Jianbin
Published: February 2017

The hot deformation behavior of as-cast 30Cr2Ni4MoV steel was characterized using processing maps in the temperature range 850 to 1200 °C and strain rate range 0.01 to 10 s−1. Based on the obtained flow curves, the power dissipation maps at different strains were developed and the effect of the strain on the efficiency of power dissipation was discussed in detail. The processing maps at different strains were obtained by superimposing the instability maps on the power dissipation maps. According to the processing map and the metallographic observation, the optimum domain of hot deformation was in the temperature range of 950–1200 °C and strain rate range of 0.03–0.5 s−1, with a peak efficiency of 0.41 at 1100 °C and 0.25 s−1 which were the optimum hot working parameters.
On-Line Screening, Isolation and Identification of Antioxidant Compounds of Helianthemum ruficomum
Authors: Chemam Yasmine , Benayache Samir , Marchioni Eric , Zhao Minjie , Mosset Paul , Benayache Fadila
Published: February 2017

Many Helianthemum species (Cistaceae) are recognized for their various medicinal virtues. Helianthemum ruficomum is an endemic species to the septentrional Sahara on which no report is available so far. The purpose of this work was to investigate the chemical composition and the radical scavenging capacity of this species and its isolated components. Collected from Mougheul (south-west of Algeria), the aerial parts were macerated with 80% EtOH/H2O, after evaporation, the remaining extract was diluted with H2O and extracted with petroleum ether, chloroform, ethyl acetate and n-butanol. EtOAc and n-BuOH extracts were evaluated for their free radical scavenging capacity by on-line HPLC-ABTS•+ assay. The obtained data which were confirmed by TEAC and ORAC assays, allowed guiding the fractionation of these extracts by CC, TLC and reverse phase HPLC. Among the components, 14 were isolated and identified by spectroscopic analyses: protocatechuic acid (1), trans-tiliroside (2), cis-tiliroside (3), astragalin (4), picein (7), vanillic acid 4-O-β-d-glucopyranoside (8), lavandoside (9), 4-hydroxybenzoic acid 4-O-β-d-glucopyranoside (10), nicotiflorin (11), rutin (12), vicenin-2 (13), narcissin (14) and stigmasterol (5) and β-sitosterol (6) as a mixture (71% and 29%, respectively). Compounds 5, 7, 8, 9, 10 and 14 were new for the genus Helianthemum. The antioxidant power of all the isolated compounds was also evaluated by HPLC-ABTS•+, TEAC and ORAC assays. The results clearly indicated high antioxidant potential of the extracts and tested compounds of this species especially, compounds 1, 4, 8, 9, 10 and 12.
Zunyimycins B and C, New Chloroanthrabenzoxocinones Antibiotics against Methicillin-Resistant Staphylococcus aureus and Enterococci from Streptomyces sp. FJS31-2
Authors: Lü Yuhong , Shao Meiyun , Wang Yinyin , Qian Shengyan , Wang Miao , Wang Yingquan , Li Xiaoqian , Bao Yuxin , Deng Chengmin , Yue Changwu , Liu Daishun , Liu Ning , Liu Minghao , Huang Ying , Chen Zehui , Hu Yonglin
Published: February 2017

This study performed an optimization of the fermentation conditions to activate the expression of the zunyimycin family biosynthesis genes of the zunyimycin-producing streptomycetes strain Streptomyces sp. FJS31-2. Bioassay-guided isolation and purification by varied chromatographic methods yielded two new compounds of the zunyimycin derivatives, namely, 31-2-7 and 31-2-8, accompanied with three known anthrabenzoxocinones family members of zunyimycin A, BE24566B, and chloroanthrabenzoxocinone. Their structures were elucidated by NMR, HRESIMS, IR, UV, and CD. Results showed that these two compounds were structurally similar to the previously reported compound zunyimycin A but differed in positions and number of chlorine atom substitution. The two novel compounds were called zunyimycins B and C. Antibacterial activity assay indicated that zunyimycin C showed a good inhibitory effect on the methicillin-resistant Staphylococcus aureus and Enterococci.
A Guide to the Variability of Flavonoids in Brassica oleracea
Authors: Mageney Vera , Neugart Susanne , Albach Dirk
Published: February 2017

Flavonoids represent a typical secondary metabolite class present in cruciferous vegetables. Their potential as natural antioxidants has raised considerable scientific interest. Impacts on the human body after food consumption as well as their effect as pharmaceutical supplements are therefore under investigation. Their numerous physiological functions make them a promising tool for breeding purposes. General methods for flavonoid analysis are well established, though new compounds are still being identified. However, differences in environmental circumstances of the studies and analytical methods impede comparability of quantification results. To promote future investigations on flavonoids in cruciferous plants we provide a checklist on best-practice in flavonoid research and specific flavonoid derivatives that are valuable targets for further research, choosing a representative species of scientific interest, Brassica oleracea.
Doxorubicin Conjugated to Glutathione Stabilized Gold Nanoparticles (Au-GSH-Dox) as an Effective Therapeutic Agent for Feline Injection-Site Sarcomas—Chick Embryo Chorioallantoic Membrane Study
Authors: Zabielska-Koczywąs Katarzyna , Dolka Izabella , Król Magdalena , Żbikowski Artur , Lewandowski Wiktor , Mieczkowski Józef , Wójcik Michał , Lechowski Roman
Published: February 2017

Feline injection-site sarcomas are malignant skin tumours with a high local recurrence rate, ranging from 14% to 28%. The treatment of feline injection-site sarcomas includes radical surgery, radiotherapy and/or chemotherapy. In our previous study it has been demonstrated that doxorubicin conjugated to glutathione-stabilized gold nanoparticles (Au-GSH-Dox) has higher cytotoxic effects than free doxorubicin for feline fibrosarcoma cell lines with high glycoprotein P activity (FFS1, FFS3). The aim of the present study was to assess the effectiveness of intratumoural injection of Au-GSH-Dox on the growth of tumours from the FFS1 and FFS3 cell lines on chick embryo chorioallantoic membrane. This model has been utilized both in human and veterinary medicine for preclinical oncological studies. The influence of intratumoural injections of Au-GSH-Dox, glutathione-stabilized gold nanoparticles and doxorubicin alone on the Ki-67 proliferation marker was also checked. We demonstrated that the volume ratio of tumours from the FFS1 and FFS3 cell lines was significantly (p < 0.01) decreased after a single intratumoural injection of Au-GSH-Dox, which confirms the positive results of in vitro studies and indicates that Au-GSH-Dox may be a potent new therapeutic agent for feline injection-site sarcomas.
Reaction of 3-Amino-1,2,4-Triazole with Diethyl Phosphite and Triethyl Orthoformate: Acid-Base Properties and Antiosteoporotic Activities of the Products
Authors: Miszczyk Patrycja , Wieczorek Dorota , Gałęzowska Joanna , Dziuk Błażej , Wietrzyk Joanna , Chmielewska Ewa
Published: February 2017

The reaction of diethyl phosphite with triethyl orthoformate and a primary amine followed by hydrolysis is presented, and the reaction was suitable for the preparation of (aminomethylene)bisphosphonates. 3-Amino-1,2,4-triazole was chosen as an interesting substrate for this reaction because it possesses multiple groups that can serve as the amino component in the reaction—namely, the side-chain and triazole amines. This substrate readily forms 1,2,4-triazolyl-3-yl-aminomethylenebisphosphonic acid (compound 1) as a major product, along with N-ethylated bisphosphonates as side products. The in vitro antiproliferative effects of the synthesized aminomethylenebisphosphonic acids against J774E macrophages were determined. These compounds exhibit similar activity to zoledronic acid and higher activity than incadronic acid.
Oral Administration of the Japanese Traditional Medicine Keishibukuryogan-ka-yokuinin Decreases Reactive Oxygen Metabolites in Rat Plasma: Identification of Chemical Constituents Contributing to Antioxidant Activity
Authors: Matsubara Yosuke , Matsumoto Takashi , Sekiguchi Kyoji , Koseki Junichi , Kaneko Atsushi , Yamaguchi Takuji , Kurihara Yumiko , Kobayashi Hiroyuki
Published: February 2017

Insufficient detoxification and/or overproduction of reactive oxygen species (ROS) induce cellular and tissue damage, and generated reactive oxygen metabolites become exacerbating factors of dermatitis. Keishibukuryogan-ka-yokuinin (KBGY) is a traditional Japanese medicine prescribed to treat dermatitis such as acne vulgaris. Our aim was to verify the antioxidant properties of KBGY, and identify its active constituents by blood pharmacokinetic techniques. Chemical constituents were quantified in extracts of KBGY, crude components, and the plasma of rats treated with a single oral administration of KBGY. Twenty-three KBGY compounds were detected in plasma, including gallic acid, prunasin, paeoniflorin, and azelaic acid, which have been reported to be effective for inflammation. KBGY decreased level of the diacron-reactive oxygen metabolites (d-ROMs) in plasma. ROS-scavenging and lipid hydroperoxide (LPO) generation assays revealed that gallic acid, 3-O-methylgallic acid, (+)-catechin, and lariciresinol possess strong antioxidant activities. Gallic acid was active at a similar concentration to the maximum plasma concentration, therefore, our findings indicate that gallic acid is an important active constituent contributing to the antioxidant effects of KBGY. KBGY and its active constituents may improve redox imbalances induced by oxidative stress as an optional treatment for skin diseases.
Cytotoxicity and Antioxidant Potential of Novel 2-(2-((1H-indol-5yl)methylene)-hydrazinyl)-thiazole Derivatives
Authors: Grozav Adriana , Porumb Ioan-Dan , Găină Luiza , Filip Lorena , Hanganu Daniela
Published: February 2017

Newly synthesized 2-(2-((1H-indol-5yl)methylene)-hydrazinyl)-thiazole derivatives were evaluated for their in vitro cytotoxicity on two carcinoma cell lines A2780 and HeLa. Significant cytotoxic activity for 2-(2-((1H-indol-5-yl)methylene)hydrazinyl)-4-methylthiazole (1) and 2-(2-((1H-indol-5-yl)methylene)hydrazinyl)-4-phenylthiazole (3), on both A2780 [IC50: 11.6 μM (1), and 12.4 μM (3)] and HeLa [IC50: 22.4 μM (1) and 19.4μM (3)] cell lines is reported. Their antioxidant potential was evaluated by spectrophotometric method, using DPPH radical or Fe (TPTZ)3+ complex, and EPR spectroscopy, therefore the compounds 1 and 3 showed remarkable antioxidant activity simultaneously with a cytotoxic effect on A2780 and HeLa cell lines. Furthermore, based on theoretical quantum chemical calculation, the present study analyzed the chemoselectivity of the hydrogen extraction from the indolyl-hydrazinil-thiazoles in reaction with free radicals.
Influence of Weak Base Addition to Hole-Collecting Buffer Layers in Polymer:Fullerene Solar Cells
Authors: Seo Jooyeok , Park Soohyeong , Song Myeonghun , Jeong Jaehoon , Lee Chulyeon , Kim Hwajeong , Kim Youngkyoo
Published: February 2017

We report the effect of weak base addition to acidic polymer hole-collecting layers in normal-type polymer:fullerene solar cells. Varying amounts of the weak base aniline (AN) were added to solutions of poly(3,4-ethylenedioxythiophene):poly(styrenesulfonate) (PEDOT:PSS). The acidity of the aniline-added PEDOT:PSS solutions gradually decreased from pH = 1.74 (AN = 0 mol% ) to pH = 4.24 (AN = 1.8 mol %). The electrical conductivity of the PEDOT:PSS-AN films did not change much with the pH value, while the ratio of conductivity between out-of-plane and in-plane directions was dependent on the pH of solutions. The highest power conversion efficiency (PCE) was obtained at pH = 2.52, even though all devices with the PEDOT:PSS-AN layers exhibited better PCE than those with the pristine PEDOT:PSS layers. Atomic force microscopy investigation revealed that the size of PEDOT:PSS domains became smaller as the pH increased. The stability test for 100 h illumination under one sun condition disclosed that the PCE decay was relatively slower for the devices with the PEDOT:PSS-AN layers than for those with pristine PEDOT:PSS layers.
Lutein and Zeaxanthin—Food Sources, Bioavailability and Dietary Variety in Age‐Related Macular Degeneration Protection
Authors: Eisenhauer Bronwyn , Natoli Sharon , Liew Gerald , Flood Victoria
Published: February 2017

Lutein and zeaxanthin (L/Z) are the predominant carotenoids which accumulate in the retina of the eye. The impact of L/Z intake on the risk and progression of age‐related macular degeneration (AMD), a leading cause of blindness in the developed world, has been investigated in cohort studies and clinical trials. The aims of this review were to critically examine the literature and evaluate the current evidence relating to L/Z intake and AMD, and describe important food sources and factors that increase the bioavailability of L/Z, to inform dietary models. Cohort studies generally assessed L/Z from dietary sources, while clinical trials focused on providing L/Z as a supplement. Important considerations to take into account in relation to dietary L/Z include: nutrient‐rich sources of L/Z, cooking methods, diet variety and the use of healthy fats. Dietary models include examples of how suggested effective levels of L/Z can be achieved through diet alone, with values of 5 mg and 10 mg per day described. These diet models depict a variety of food sources, not only from dark green leafy vegetables, but also include pistachio nuts and other highly bioavailable sources of L/Z such as eggs. This review and the diet models outlined provide information about the importance of diet variety among people at high risk of AMD or with early signs and symptoms of AMD.
Visible Light-Induced Metal Free Surface Initiated Atom Transfer Radical Polymerization of Methyl Methacrylate on SBA-15
Authors: Ma Liang , Li Na , Zhu Jian , Chen Xiaodong
Published: February 2017

Surface-initiated atom transfer radical polymerization (SI-ATRP) is one of the most versatile techniques to modify the surface properties of materials. Recent developed metal-free SI-ATRP makes such techniques more widely applicable. Herein photo-induced metal-free SI-ATRP of methacrylates, such as methyl methacrylate, N-isopropanyl acrylamide, and N,N-dimethylaminoethyl methacrylate, on the surface of SBA-15 was reported to fabricate organic-inorganic hybrid materials. A SBA-15-based polymeric composite with an adjustable graft ratio was obtained. The structure evolution during the SI-ATRP modification of SBA-15 was monitored and verified by FT-IR, XPS, TGA, BET, and TEM. The obtained polymeric composite showed enhanced adsorption ability for the model compound toluene in aqueous conditions. This procedure provides a low-cost, readily available, and easy modification method to synthesize polymeric composites without the contamination of metal.
Characterization of Whey Protein Oil-In-Water Emulsions with Different Oil Concentrations Stabilized by Ultra-High Pressure Homogenization
Authors: Hebishy Essam , Zamora Anna , Buffa Martin , Blasco-Moreno Anabel , Trujillo Antonio-José
Published: February 2017

In this study, the effect of ultra-high-pressure homogenization (UHPH: 100 or 200 MPa at 25 °C), in comparison to colloid mill (CM: 5000 rpm at 20 °C) and conventional homogenization (CH: 15 MPa at 60 °C), on the stability of oil-in-water emulsions with different oil concentrations (10, 30 or 50 g/100 g) emulsified by whey protein isolate (4 g/100 g) was investigated. Emulsions were characterized for their microstructure, rheological properties, surface protein concentration (SPC), stability to creaming and oxidative stability under light (2000 lux/m2). UHPH produced emulsions containing lipid droplets in the sub-micron range (100–200 nm) and with low protein concentrations on droplet surfaces. Droplet size (d3.2, µm) was increased in CH and UHPH emulsions by increasing the oil concentration. CM emulsions exhibited Newtonian flow behaviour at all oil concentrations studied; however, the rheological behaviour of CH and UHPH emulsions varied from Newtonian flow (n ≈ 1) to shear-thinning (n ˂ 1) and thixotropic behaviour in emulsions containing 50% oil. This was confirmed by the non-significant differences in the d4.3 (µm) value between the top and bottom of emulsions in tubes left at room temperature for nine days and also by a low migration velocity measured with a Turbiscan LAB instrument. UHPH emulsions showed significantly lower oxidation rates during 10 days storage in comparison to CM and CH emulsions as confirmed by hydroperoxides and thiobarbituric acid-reactive substances (TBARS). UHPH emulsions treated at 100 MPa were less oxidized than those treated at 200 MPa. The results from this study suggest that UHPH treatment generates emulsions that have a higher stability to creaming and lipid oxidation compared to colloid mill and conventional treatments.
Topology Adaptive Water Boundary Extraction Based on a Modified Balloon Snake: Using GF-1 Satellite Images as an Example
Authors: Du Wenying , Chen Nengcheng , Liu Dandan
Published: February 2017

Topology adaptive water boundary extraction from satellite images using parametric snakes remains challenging in the domain of image segmentation. This paper proposed a modified balloon snake (MB-Snake) method based on the balloon snake (B-Snake) method, overcoming the B-Snake’s drawbacks of inaccurate positioning, topology inflexibility, and non-automatic contour evolution termination. Six satellite images, acquired by the GF-1 wide field of view sensor and with water bodies of different types, inner land numbers, areas, boundary and background complexities, and digital number value contrasts, were used as experimental images, in which the MB-Snake method, and two comparison methods, the B-Snake and the orthogonal topology adaptive snake (OT-Snake) methods, were applied for water boundary extraction. All the extracted results were first qualitatively assessed and further quantitatively evaluated via three indexes, including correctness, completeness, and area overlap measure. Both of the qualitative and quantitative evaluation results consistently demonstrated that the MB-Snake method can efficiently improve the positioning accuracy, detect and dispose of topology collisions, and perform automatic contour evolution termination, successfully meeting its design objectives, and exhibiting great superiority to the existing topology-flexible parametric snakes. The sensitivity to initial contours, the effects of model parameters, and spatial resolutions of satellite images, and image demands of the MB-Snake method was also analyzed.
Spatio-Temporal LAI Modelling by Integrating Climate and MODIS LAI Data in a Mesoscale Catchment
Authors: Sun Liya , Schulz Karsten
Published: February 2017

Vegetation is often represented by the leaf area index (LAI) in many ecological, hydrological and meteorological land surface models. However, the spatio-temporal dynamics of the vegetation are important to represent in these models. While the widely applied methods, such as the Canopy Structure Dynamic Model (CSDM) and the Double Logistic Model (DLM) are solely based on cumulative daily mean temperature data as input, a new spatio-temporal LAI prediction model referred to as the Temperature Precipitation Vegetation Model (TPVM) is developed that also considers cumulative precipitation data as input into the modelling process. TPVM as well as CDSM and DLM model performances are compared and evaluated against filtered LAI data from the Moderate Resolution Imaging Spectroradiometer (MODIS). The calibration/validation results of a cross-validation performed in the meso-scale Attert catchment in Luxembourg indicated that the DLM and TPVM generally provided more realistic and accurate LAI data. The TPVM performed superiorly for the agricultural land cover types compared to the other two models, which only used the temperature data. The Pearson's correlation coefficient (CC) between TPVM and the field measurement is 0.78, compared to 0.73 and 0.69 for the DLM and CSDM, respectively. The phenological metrics were derived from the TPVM model to investigate the interaction between the climate variables and the LAI variations. These interactions illustrated the dominant control of temperature on the LAI dynamics for deciduous forest cover, and a combined influence of temperature with precipitation for the agricultural land use areas.
GaitKeeper: A System for Measuring Canine Gait
Authors: Ladha Cassim , O’Sullivan Jack , Belshaw Zoe , Asher Lucy
Published: February 2017

It is understood gait has the potential to be used as a window into neurodegenerative disorders, identify markers of subclinical pathology, inform diagnostic algorithms of disease progression and measure the efficacy of interventions. Dogs’ gaits are frequently assessed in a veterinary setting to detect signs of lameness. Despite this, a reliable, affordable and objective method to assess lameness in dogs is lacking. Most described canine lameness assessments are subjective, unvalidated and at high risk of bias. This means reliable, early detection of canine gait abnormalities is challenging, which may have detrimental implications for dogs’ welfare. In this paper, we draw from approaches and technologies used in human movement science and describe a system for objectively measuring temporal gait characteristics in dogs (step-time, swing-time, stance-time). Asymmetries and variabilities in these characteristics are of known clinical significance when assessing lameness but presently may only be assessed on coarse scales or under highly instrumented environments. The system consists an inertial measurement unit, containing a 3-axis accelerometer and gyroscope coupled with a standardized walking course. The measurement unit is attached to each leg of the dog under assessment before it is walked around the course. The data by the measurement unit is then processed to identify steps and subsequently, micro-gait characteristics. This method has been tested on a cohort of 19 healthy dogs of various breeds ranging in height from 34.2 cm to 84.9 cm. We report the system as capable of making precise step delineations with detections of initial and final contact times of foot-to-floor to a mean precision of 0.011 s and 0.048 s, respectively. Results are based on analysis of 12,678 foot falls and we report a sensitivity, positive predictive value and F-score of 0.81, 0.83 and 0.82 respectively. To investigate the effect of gait on system performance, the approach was tested in both walking and trotting with no significant performance deviation with 7249 steps reported for a walking gait and 4977 for a trotting gait. The number of steps reported for each leg were approximately equal and this consistency was true in both walking and trotting gaits. In the walking gait 1965, 1790, 1726 and 1768 steps were reported for the front left, front right, hind left and hind right legs respectively. 1361, 1250, 1176 and 1190 steps were reported for each of the four legs in the trotting gait. The proposed system is a pragmatic and precise solution for obtaining objective measurements of canine gait. With further development, it promises potential for a wide range of applications in both research and clinical practice.
Probabilistic Neighborhood-Based Data Collection Algorithms for 3D Underwater Acoustic Sensor Networks
Authors: Han Guangjie , Li Shanshan , Zhu Chunsheng , Jiang Jinfang , Zhang Wenbo
Published: February 2017

Marine environmental monitoring provides crucial information and support for the exploitation, utilization, and protection of marine resources. With the rapid development of information technology, the development of three-dimensional underwater acoustic sensor networks (3D UASNs) provides a novel strategy to acquire marine environment information conveniently, efficiently and accurately. However, the specific propagation effects of acoustic communication channel lead to decreased successful information delivery probability with increased distance. Therefore, we investigate two probabilistic neighborhood-based data collection algorithms for 3D UASNs which are based on a probabilistic acoustic communication model instead of the traditional deterministic acoustic communication model. An autonomous underwater vehicle (AUV) is employed to traverse along the designed path to collect data from neighborhoods. For 3D UASNs without prior deployment knowledge, partitioning the network into grids can allow the AUV to visit the central location of each grid for data collection. For 3D UASNs in which the deployment knowledge is known in advance, the AUV only needs to visit several selected locations by constructing a minimum probabilistic neighborhood covering set to reduce data latency. Otherwise, by increasing the transmission rounds, our proposed algorithms can provide a tradeoff between data collection latency and information gain. These algorithms are compared with basic Nearest-neighbor Heuristic algorithm via simulations. Simulation analyses show that our proposed algorithms can efficiently reduce the average data collection completion time, corresponding to a decrease of data latency.
Online Condition Monitoring of a Rail Fastening System on High-Speed Railways Based on Wavelet Packet Analysis
Authors: Wei Jiahong , Liu Chong , Ren Tongqun , Liu Haixia , Zhou Wenjing
Published: February 2017

The rail fastening system is an important part of a high-speed railway track. It is always critical to the operational safety and comfort of railway vehicles. Therefore, the condition detection of the rail fastening system, looseness or absence, is an important task in railway maintenance. However, the vision-based method cannot identify the severity of rail fastener looseness. In this paper, the condition of rail fastening system is monitored based on an automatic and remote-sensing measurement system. Meanwhile, wavelet packet analysis is used to analyze the acceleration signals, based on which two damage indices are developed to locate the damage position and evaluate the severity of rail fasteners looseness, respectively. To verify the effectiveness of the proposed method, an experiment is performed on a high-speed railway experimental platform. The experimental results show that the proposed method is effective to assess the condition of the rail fastening system. The monitoring system significantly reduces the inspection time and increases the efficiency of maintenance management.
Time-Elastic Generative Model for Acceleration Time Series in Human Activity Recognition
Authors: Munoz-Organero Mario , Ruiz-Blazquez Ramona
Published: February 2017

Body-worn sensors in general and accelerometers in particular have been widely used in order to detect human movements and activities. The execution of each type of movement by each particular individual generates sequences of time series of sensed data from which specific movement related patterns can be assessed. Several machine learning algorithms have been used over windowed segments of sensed data in order to detect such patterns in activity recognition based on intermediate features (either hand-crafted or automatically learned from data). The underlying assumption is that the computed features will capture statistical differences that can properly classify different movements and activities after a training phase based on sensed data. In order to achieve high accuracy and recall rates (and guarantee the generalization of the system to new users), the training data have to contain enough information to characterize all possible ways of executing the activity or movement to be detected. This could imply large amounts of data and a complex and time-consuming training phase, which has been shown to be even more relevant when automatically learning the optimal features to be used. In this paper, we present a novel generative model that is able to generate sequences of time series for characterizing a particular movement based on the time elasticity properties of the sensed data. The model is used to train a stack of auto-encoders in order to learn the particular features able to detect human movements. The results of movement detection using a newly generated database with information on five users performing six different movements are presented. The generalization of results using an existing database is also presented in the paper. The results show that the proposed mechanism is able to obtain acceptable recognition rates (F = 0.77) even in the case of using different people executing a different sequence of movements and using different hardware.
Intelligent Luminance Control of Lighting Systems Based on Imaging Sensor Feedback
Authors: Liu Haoting , Zhou Qianxiang , Yang Jin , Jiang Ting , Liu Zhizhen , Li Jie
Published: February 2017

An imaging sensor-based intelligent Light Emitting Diode (LED) lighting system for desk use is proposed. In contrast to the traditional intelligent lighting system, such as the photosensitive resistance sensor-based or the infrared sensor-based system, the imaging sensor can realize a finer perception of the environmental light; thus it can guide a more precise lighting control. Before this system works, first lots of typical imaging lighting data of the desk application are accumulated. Second, a series of subjective and objective Lighting Effect Evaluation Metrics (LEEMs) are defined and assessed for these datasets above. Then the cluster benchmarks of these objective LEEMs can be obtained. Third, both a single LEEM-based control and a multiple LEEMs-based control are developed to realize a kind of optimal luminance tuning. When this system works, first it captures the lighting image using a wearable camera. Then it computes the objective LEEMs of the captured image and compares them with the cluster benchmarks of the objective LEEMs. Finally, the single LEEM-based or the multiple LEEMs-based control can be implemented to get a kind of optimal lighting effect. Many experiment results have shown the proposed system can tune the LED lamp automatically according to environment luminance changes.
BeiDou Signal Acquisition with Neumann–Hoffman Code Modulation in a Degraded Channel
Authors: Zhao Lin , Liu Aimeng , Ding Jicheng , Wang Jing
Published: February 2017

With the modernization of global navigation satellite systems (GNSS), secondary codes, also known as the Neumann–Hoffman (NH) codes, are modulated on the satellite signal to obtain a better positioning performance. However, this leads to an attenuation of the acquisition sensitivity of classic integration algorithms because of the frequent bit transitions that refer to the NH codes. Taking weak BeiDou navigation satellite system (BDS) signals as objects, the present study analyzes the side effect of NH codes on acquisition in detail and derives a straightforward formula, which indicates that bit transitions decrease the frequency accuracy. To meet the requirement of carrier-tracking loop initialization, a frequency recalculation algorithm is proposed based on verified fast Fourier transform (FFT) to mitigate the effect, meanwhile, the starting point of NH codes is found. Then, a differential correction is utilized to improve the acquisition accuracy of code phase. Monte Carlo simulations and real BDS data tests demonstrate that the new structure is superior to the conventional algorithms both in detection probability and frequency accuracy in a degraded channel.
mDARAL: A Multi-Radio Version for the DARAL Routing Algorithm
Authors: Estévez Francisco , Castillo-Secilla José , González Jesús , Olivares Joaquín , Glösekötter Peter
Published: February 2017

Smart Cities are called to change the daily life of human beings. This concept permits improving the efficiency of our cities in several areas such as the use of water, energy consumption, waste treatment, and mobility both for people as well as vehicles throughout the city. This represents an interconnected scenario in which thousands of embedded devices need to work in a collaborative way both for sensing and modifying the environment properly. Under this scenario, the majority of devices will use wireless protocols for communicating among them, representing a challenge for optimizing the use of the electromagnetic spectrum. When the density of deployed nodes increases, the competition for using the physical medium becomes harder and, in consequence, traffic collisions will be higher, affecting data-rates in the communication process. This work presents mDARAL, a multi-radio routing algorithm based on the Dynamic and Adaptive Radio Algorithm (DARAL), which has the capability of isolating groups of nodes into sub-networks. The nodes of each sub-network will communicate among them using a dedicated radio frequency, thus isolating the use of the radio channel to a reduced number of nodes. Each sub-network will have a master node with two physical radios, one for communicating with its neighbours and the other for being the contact point among its group and other sub-networks. The communication among sub-networks is done through master nodes in a dedicated radio frequency. The algorithm works to maximize the overall performance of the network through the distribution of the traffic messages into unoccupied frequencies. The obtained results show that mDARAL achieves great improvement in terms of the number of control messages necessary to connect a node to the network, convergence time and energy consumption during the connection phase compared to DARAL.
Alternative cDEP Design to Facilitate Cell Isolation for Identification by Raman Spectroscopy
Authors: Hanson Cynthia , Vargis Elizabeth
Published: February 2017

Dielectrophoresis (DEP) uses non-uniform electric fields to cause motion in particles due to the particles’ intrinsic properties. As such, DEP is a well-suited label-free means for cell sorting. Of the various methods of implementing DEP, contactless dielectrophoresis (cDEP) is advantageous as it avoids common problems associated with DEP, such as electrode fouling and electrolysis. Unfortunately, cDEP devices can be difficult to fabricate, replicate, and reuse. In addition, the operating parameters are limited by the dielectric breakdown of polydimethylsiloxane (PDMS). This study presents an alternative way to fabricate a cDEP device allowing for higher operating voltages, improved replication, and the opportunity for analysis using Raman spectroscopy. In this device, channels were formed in fused silica rather than PDMS. The device successfully trapped 3.3 μm polystyrene spheres for analysis by Raman spectroscopy. The successful implementation indicates the potential to use cDEP to isolate and identify biological samples on a single device.
Effect of the Matching Circuit on the Electromechanical Characteristics of Sandwiched Piezoelectric Transducers
Authors: Lin Shuyu , Xu Jie
Published: February 2017

The input electrical impedance behaves as a capacitive when a piezoelectric transducer is excited near its resonance frequency. In order to increase the energy transmission efficiency, a series or parallel inductor should be used to compensate the capacitive impedance of the piezoelectric transducer. In this paper, the effect of the series matching inductor on the electromechanical characteristics of the piezoelectric transducer is analyzed. The dependency of the resonance/anti-resonance frequency, the effective electromechanical coupling coefficient, the electrical quality factor and the electro-acoustical efficiency on the matching inductor is obtained. It is shown that apart from compensating the capacitive impedance of the piezoelectric transducer, the series matching inductor can also change the electromechanical characteristics of the piezoelectric transducer. When series matching inductor is increased, the resonance frequency is decreased and the anti-resonance unchanged; the effective electromechanical coupling coefficient is increased. For the electrical quality factor and the electroacoustic efficiency, the dependency on the matching inductor is different when the transducer is operated at the resonance and the anti-resonance frequency. The electromechanical characteristics of the piezoelectric transducer with series matching inductor are measured. It is shown that the theoretically predicted relationship between the electromechanical characteristics and the series matching inductor is in good agreement with the experimental results.
Geometric Shape Induced Small Change of Seebeck Coefficient in Bulky Metallic Wires
Authors: Li Gang , Su Xiaohui , Yang Fan , Huo Xiaoye , Zhang Gengmin , Xu Shengyong
Published: February 2017

In this paper, we report the results of slight changes in the thermopower of long W, Mo, Zn, Cu, brass, and Ti wires, that resulted from changes in the wire’s diameter or cross-sectional area. The samples used in the tests had a round shape with a diameter that ranged from tens of micron to 2 mm, which was much larger than the corresponding mean free paths of these materials. Nevertheless, a small change in thermopower, at the order of 1–10 nV/K, was repeatedly observed when the wire diameter was changed, or when the cross-sectional area of the wire was altered by mechanical methods, such as grinding or splitting. The results are consistent with previous observations showing that the thermopower in metallic thin film stripes changes with their width, from 100 μm to as little as 70 nm, implying a universal, geometric-boundary-related size effect of thermopower in metal materials, that occurs at the nanometer scale and continuously decreases all the way to the millimeter scale. This effect could be applied in the manufacturing of high-temperature sensors with simple structures.
A Web of Things-Based Emerging Sensor Network Architecture for Smart Control Systems
Authors: Khan Murad , Silva Bhagya , Han Kijun
Published: February 2017

The Web of Things (WoT) plays an important role in the representation of the objects connected to the Internet of Things in a more transparent and effective way. Thus, it enables seamless and ubiquitous web communication between users and the smart things. Considering the importance of WoT, we propose a WoT-based emerging sensor network (WoT-ESN), which collects data from sensors, routes sensor data to the web, and integrate smart things into the web employing a representational state transfer (REST) architecture. A smart home scenario is introduced to evaluate the proposed WoT-ESN architecture. The smart home scenario is tested through computer simulation of the energy consumption of various household appliances, device discovery, and response time performance. The simulation results show that the proposed scheme significantly optimizes the energy consumption of the household appliances and the response time of the appliances.
Synthesizing Existing CSMA and TDMA Based MAC Protocols for VANETs
Authors: Huang Jiawei , Li Qi , Zhong Shaohua , Liu Lianhai , Zhong Ping , Wang Jianxin , Ye Jin
Published: February 2017

Many Carrier Sense Multiple Access (CSMA) and Time Division Multiple Access (TDMA) based medium access control (MAC) protocols for vehicular ad hoc networks (VANETs) have been proposed recently. Contrary to the common perception that they are competitors, we argue that the underlying strategies used in these MAC protocols are complementary. Based on this insight, we design CTMAC, a MAC protocol that synthesizes existing strategies; namely, random accessing channel (used in CSMA-style protocols) and arbitral reserving channel (used in TDMA-based protocols). CTMAC swiftly changes its strategy according to the vehicle density, and its performance is better than the state-of-the-art protocols. We evaluate CTMAC using at-scale simulations. Our results show that CTMAC reduces the channel completion time and increases the network goodput by 45% for a wide range of application workloads and network settings.