bluuebunny/crossref_metadata_2025 huggingface dataset:
Single cell RNA sequencing of human FAPs reveals different functional stages in Duchenne muscular dystrophy
Authors: Fernández-Simón Esther , Piñol-Jurado Patricia , Gokul-Nath Rasya , Unsworth Adrienne , Alonso-Pérez Jorge , Schiava Marianela , Nascimento Andres , Tasca Giorgio , Queen Rachel , Cox Dan , Suarez-Calvet Xavier , Díaz-Manera Jordi
Published: July 2024

Background: Duchenne muscular dystrophy is a genetic disease produced by mutations in the dystrophin gene characterized by early onset muscle weakness leading to severe and irreversible disability. Muscle degeneration involves a complex interplay between multiple cell lineages spatially located within areas of damage, termed the degenerative niche, including inflammatory cells, satellite cells (SCs) and fibro-adipogenic precursor cells (FAPs). FAPs are mesenchymal stem cell which have a pivotal role in muscle homeostasis as they can either promote muscle regeneration or contribute to muscle degeneration by expanding fibrotic and fatty tissue. Although it has been described that FAPs could have a different behavior in DMD patients than in healthy controls, the molecular pathways regulating their function as well as their gene expression profile are unknown.

Methods: We used single-cell RNA sequencing (scRNAseq) with 10X Genomics and Illumina technology to elucidate the differences in the transcriptional profile of isolated FAPs from healthy and DMD patients.

Results: Gene signatures in FAPs from both groups revealed transcriptional differences. Seurat analysis categorized cell clusters as proliferative FAPs, regulatory FAPs, inflammatory FAPs, and myofibroblasts. Differentially expressed genes (DEGs) between healthy and DMD FAPs included upregulated genes CHI3L1, EFEMP1, MFAP5, and TGFBR2 in DMD. Functional analysis highlighted distinctions in system development, wound healing, and cytoskeletal organization in control FAPs, while extracellular organization, degradation, and collagen degradation were upregulated in DMD FAPs. Validation of DEGs in additional samples (n = 9) using qPCR reinforced the specific impact of pathological settings on FAP heterogeneity, reflecting their distinct contribution to fibro or fatty degeneration in vivo.

Conclusion: Using the single-cell RNA seq from human samples provide new opportunities to study cellular coordination to further understand the regulation of muscle homeostasis and degeneration that occurs in muscular dystrophies.
Development and disease-specific regulation of RNA splicing in cardiovascular system
Authors: Jiang Jinxiu , Wu Hongchun , Ji Yabo , Han Kunjun , Tang Jun-Ming , Hu Shijun , Lei Wei
Published: July 2024

Alternative splicing is a complex gene regulatory process that distinguishes itself from canonical splicing by rearranging the introns and exons of an immature pre-mRNA transcript. This process plays a vital role in enhancing transcriptomic and proteomic diversity from the genome. Alternative splicing has emerged as a pivotal mechanism governing complex biological processes during both heart development and the development of cardiovascular diseases. Multiple alternative splicing factors are involved in a synergistic or antagonistic manner in the regulation of important genes in relevant physiological processes. Notably, circular RNAs have only recently garnered attention for their tissue-specific expression patterns and regulatory functions. This resurgence of interest has prompted a reevaluation of the topic. Here, we provide an overview of our current understanding of alternative splicing mechanisms and the regulatory roles of alternative splicing factors in cardiovascular development and pathological process of different cardiovascular diseases, including cardiomyopathy, myocardial infarction, heart failure and atherosclerosis.
Numerical simulation of multiple hydraulic fracture propagation in heterogeneous coal reservoirs based on combined finite-discrete element method
Authors: Xia Binwei , Zhang Xingguo , Ma Zikun , Xu Xinqin
Published: July 2024

Multi-stage fracturing in Horizontal well increases the permeability of coalbed methane by generating multiple fractures. However, the heterogeneity of coal reservoirs is a crucial factor that cannot be ignored in the study of multiple hydraulic fracture propagation. Therefore, we established a two-dimensional model for multiple hydraulic fracture propagation based on the combined finite-discrete element method (FDEM) and assigned a Weibull distribution function to the heterogeneity of the physical parameters of the cohesive elements in the model. The objective was to simulate and study the fracture propagation law of multi-cluster fracturing in horizontal wells in heterogeneous coal reservoirs. The research results indicated that: 1) as the heterogeneity of the coal reservoir weakened, the deflection angle of the main fracture increased. More secondary fractures were generated in the coal reservoir, leading to significant discontinuity. 2) The fracturing disturbance area was always concentrated at the tip of the main fracture, with a double wing shape. However, the fracturing disturbance areas at the tips of multiple main fractures could easily converge, with a square shape; 3) It is recommended to use a moderate injection rate and increase the perforation spacing appropriately when hydraulic fracturing is carried out in coal reservoirs with a heterogeneity coefficient m=5.
Landslide susceptibility zoning with five data models and performance comparison in Liangshan Prefecture, China
Authors: Xu Wei , Cui Yulong , Wang JiaZhu , Gong LingFeng , Zhu Lulu
Published: July 2024

Liangshan Prefecture, located at the northeastern edge of the Hengduan Mountain System and within the southern section of the Sichuan-Yunnan tectonic belt in Sichuan Province, China, a region prone to landslides, collapses and debris flows due to its active tectonics, complex topography and significant river erosion. By analysing a dataset of environment factors and geological hazard catalogue, the research uses the Relief algorithm to identify critical influencing factors for each hazard type, selecting 10, 9 and 9 factors for landslides, collapses and debris flows, respectively. Five models are used to assess the vulnerability of these hazards: the Information Value model, the Evidence Weight model, the Logistic Regression model, and both the Evidence Weight-Logistic Regression and the Information Value-Logistic Regression coupled models. The effectiveness of these models is confirmed by confusion matrix and ROC curve analyses, with the combined models showing particularly high accuracy in assessing susceptibility. High risk zones were identified in specific areas and along major fault zones in Liangshan Prefecture. The research provides significant insights into the susceptibility of geological hazards in mountainous and canyon regions, offering a comprehensive approach that goes beyond the limitations of single model applications. This methodology not only provides more accurate and comprehensive results, but also serves as a fundamental reference for geological hazard mitigation and management in Liangshan Prefecture, potentially benefiting similar regions worldwide.
Review of forest ecosystem services evaluation studies in East Africa
Authors: Osewe Erick O. , Popa Bogdan , Vacik Harald , Osewe Ibrahim , Abrudan Ioan Vasile
Published: July 2024

The East African region hosts diverse forest ecosystems, such as woodlands, highland forests, and coastal mangrove forests. These ecosystems are crucial for biodiversity and support various plant and animal species. They provide essential resources, benefiting livelihoods directly and indirectly. Examining regional and global variations in forest ecosystem valuation, especially regarding livelihood benefits, is crucial for sustainable resource management aligned with forest-based climate solutions. The aim of this review is to assess how regional contextual factors and global trends impact the valuation of ecosystem services (ES) in East Africa, with two main objectives (1) to identify the most evaluated ES in East Africa and (2) to identify the preferred ES valuation methods and approaches applied in East Africa. Data from the Web of Science/Clarivate platform was used in the systematic review process using the Reporting standard for Systematic Evidence Syntheses to retrieve and analyse 222 articles. The ES were categorized using the Millennium Ecosystem Assessment framework and the Common International Classification of Ecosystem Services in order to create a review database. Provisioning services i.e., wood biomass and food production were the most assessed at 55%, followed by 30% regulating services i.e., carbon storage, 8.6% support services i.e., habitat and 6.4% cultural services i.e., ecotourism which reflected communities’ direct reliance on forest resources. The preferred direct ES valuation techniques included market price at 14.9% for assessing provisioning services and travel cost methods at 10.4% for cultural services. Amongst the indirect ES valuation techniques, remote sensing at 14.7% were preferred as they proved efficient for large and remote tropical forest areas. Participatory methods such as interviews at 11.8% were also preferred because they offer holistic perspectives on community priorities. This review provides spatial context on the regional priorities of ES valuation which is vital for safeguarding natural resources for future generations.
“Identity theft” in BRCA1/2: impact of positive genetic test results and risk-reducing interventions
Authors: Adler Jonathan M. , Hesse-Biber Sharlene , Seven Memnun , Dwyer Andrew A.
Published: July 2024

Individuals harboring breast cancer gene 1/2 (BRCA1/2) pathogenic variants are at increased lifetime risk for developing cancer. Learning one’s BRCA1/2 carrier status is a watershed moment that can result in psychological distress, anxiety, and depression, as well as feelings of vulnerability and stigma. However, emotional and coping responses to learning one’s BRCA1/2 carrier status and after risk-reducing interventions (i.e., preventative bilateral mastectomy) are variable, and existing literature reveals mixed and sometimes contradictory results. Drawing on the concept of narrative identity from the field of psychology, we sought to examine if “identity theft” (the sudden overtaking of one’s narrative agency by an external force) may help explain the heterogeneity of emotional and coping responses following the revelation of BRCA carrier status and the subsequent medical intervention one may receive. This Perspective explores BRCA related identity theft using two case studies. Narrative analysis of qualitative interviews uncover the ways that patients experience the disintegration (theft) of their identity as well as their efforts to build and reintegrate a new BRCA carrier identity. This initial qualitative exploration provides preliminary support for the relevance of narrative identity and identity theft to hereditary cancer. We posit that applying the lens of identity theft may hold promise as a unifying concept, integrating across the variable emotional and coping responses among BRCA carriers. Employing a lens of identity theft may help inform the development of tailored narrative interventions as part of precision healthcare to support active coping and psychosocial wellbeing.
A disulfidptosis-related lncRNAs cluster to forecast the prognosis and immune landscapes of ovarian cancer
Authors: Wei Jiahui , Wang Ming , Wu Yumei
Published: July 2024

Objective

Disulfidptosis is a newly recognized form of regulated cell death that has been linked to cancer progression and prognosis. Despite this association, the prognostic significance, immunological characteristics and treatment response of disulfidptosis-related lncRNAs (DRLs) in ovarian cancer have not yet been elucidated.

Methods

The lncRNA data and clinical information for ovarian cancer and normal samples were obtained from the UCSC XENA. Differential expression analysis and Pearson analysis were utilized to identify core DRLs, followed by LASSO algorithm. Random Survival Forest was used to construct a prognostic model. The relationships between risk scores, RNA methylation, immune cell infiltration, mutation, responses to immunotherapy and drug sensitivity analysis were further examined. Additionally, qRT-PCR experiments were conducted to validate the expression of the core DRLs in human ovarian cancer cells and normal ovarian cells and the scRNA-seq data of the core DRLs were obtained from the GEO dataset, available in the TISCH database.

Results

A total of 8 core DRLs were obtained to construct a prognostic model for ovarian cancer, categorizing all patients into low-risk and high-risk groups using an optimal cutoff value. The AUC values for 1-year, 3-year and 5-year OS in the TCGA cohort were 0.785, 0.810 and 0.863 respectively, proving a strong predictive capability of the model. The model revealed the high-risk group patients exhibited lower overall survival rates, higher TIDE scores and lower TMB levels compared to the low-risk group. Variations in immune cell infiltration and responses to therapeutic drugs were observed between the high-risk and low-risk groups. Besides, our study verified the correlations between the DRLs and RNA methylation. Additionally, qRT-PCR experiments and single-cell RNA sequencing data analysis were conducted to confirm the significance of the core DRLs at both cellular and scRNA-seq levels.

Conclusion

We constructed a reliable and novel prognostic model with a DRLs cluster for ovarian cancer, providing a foundation for further researches in the management of this disease.
A critical juncture: promoting responsible innovation in the self-driving automobile sector while improving human factors
Authors: Battel Kayli , Pearl David
Published: July 2024

Navigating the future of autonomous vehicles (AVs) brings promise and peril. This paper zeroes in on Tesla’s innovative yet sometimes controversial approach to AVs, spotlighting the intersection of human cognition, vehicle automation, and safety. Amid the excitement of rapid tech advancements, we highlight the risks of over-reliance and potential misperceptions fueled by marketing overreach. Introducing the “Quick Car Scorecard,” we offer a solution to empower consumers in deciphering AV usability, bridging tech specs with real-world needs. As AVs steer our future, it is crucial to prioritize human life and responsible innovation. The journey to automation demands not just speed, but utmost caution and clarity.
Interaction of antiphospholipid antibodies with endothelial cells in antiphospholipid syndrome
Authors: Feng Weimin , Qiao Jiao , Tan Yuan , Liu Qi , Wang Qingchen , Yang Boxin , Yang Shuo , Cui Liyan
Published: July 2024

Antiphospholipid syndrome (APS) is an autoimmune disease with arteriovenous thrombosis and recurrent miscarriages as the main clinical manifestations. Due to the complexity of its mechanisms and the diversity of its manifestations, its diagnosis and treatment remain challenging issues. Antiphospholipid antibodies (aPL) not only serve as crucial “biomarkers” in diagnosing APS but also act as the “culprits” of the disease. Endothelial cells (ECs), as one of the core target cells of aPL, bridge the gap between the molecular level of these antibodies and the tissue and organ level of pathological changes. A more in-depth exploration of the relationship between ECs and the pathogenesis of APS holds the potential for significant advancements in the precise diagnosis, classification, and therapy of APS. Many researchers have highlighted the vital involvement of ECs in APS and the underlying mechanisms governing their functionality. Through extensive in vitro and in vivo experiments, they have identified multiple aPL receptors on the EC membrane and various intracellular pathways. This article furnishes a comprehensive overview and summary of these receptors and signaling pathways, offering prospective targets for APS therapy.
Serum exosomes lncRNAs: TCONS_I2_00013502 and ENST00000363624 are new diagnostic markers for rheumatoid arthritis
Authors: Wu Han , Chen Qiuhua , Wang Sijie , Yang Chunlong , Xu Li , Xiao Haiyan , Xie Tong , Pan Qingjun
Published: July 2024

The lack of diagnostic markers limits the window of effectiveness for rheumatoid arthritis (RA) therapies. Here, we isolated exosomes of serum samples from four distinct groups RA patients, according to disease activity and with/without medication. Then, total RNA of exosomes was extracted for whole-transcriptome sequencing. Focusing on lncRNA sequencing, gene ontology (GO) and kyoto encyclopedia of genes and genomes (KEGG) pathway enrichment analyses were performed. We found that the number of upregulated lncRNAs were significantly higher than that of downregulated lncRNAs in each four RA groups. And most importantly, we identified two specific lncRNAs from differentially expressed lncRNAs, TCONS_I2_00013502 (up-regulated) and ENST00000363624 (down-regulated) in RA. Receiver Operating Characteristic (ROC) curve analysis showed that the two lncRNAs were promising biomarkers for RA diagnosis. These findings highlight lncRNAs of the serum exosome are important biomarkers and provide application potential for diagnosis of RA.
Unlocking the Potential: immune functions of oligodendrocyte precursor cells
Authors: Haroon Amr , Seerapu Harsha , Fang Li-Pao , Weß Jakob Heinrich , Bai Xianshu
Published: July 2024

Oligodendrocyte precursor cells (OPCs) have long been regarded as progenitors of oligodendrocytes, yet recent advances have illuminated their multifaceted nature including their emerging immune functions. This review seeks to shed light on the immune functions exhibited by OPCs, spanning from phagocytosis to immune modulation and direct engagement with immune cells across various pathological scenarios. Comprehensive understanding of the immune functions of OPCs alongside their other roles will pave the way for targeted therapies in neurological disorders.
Modelling water temperature dynamics for eelgrass (Zostera marina) areas in the nearshore Scotian Shelf
Authors: Jabbari Aidin , Wu Yongsheng , Wong Melisa C. , Dowd Michael
Published: July 2024

Water temperature is an important environmental factor for many ecological processes in coastal ecosystems. Here, we study water temperature dynamics at a set of study sites on the Atlantic coast of Nova Scotia where eelgrass beds are found. The central emphasis is to predict temperature on scales relevant to coastal ecosystem processes using a high-resolution nearshore oceanographic model based on the Finite Volume Community Ocean Model (FVCOM). The model predictions were evaluated against observed temperature time series at six sites for three years from 2017-2019; the evaluation indicates that the model was able to replicate the temperature variation on time scales from hours to seasonal. We also used various biologically tailored temperature metrics relevant to eelgrass condition, including mean seasonal values and variability, daily ranges, growing degree day (GDD), and warm events, to validate the model against time series observations to better understand the temperature regime at the study sites. Frequency resolved Willmott skill scores were >0.7, and the temperature metrics were well predicted with the exception of a bias in GDD at some of the shallow sites. The eelgrass sites have a wide range of temperature conditions. Mean water temperature in the summer differed by more than 7°C between the shallowest and the deepest sites, and the rate of heat accumulation was fastest at shallow sites which had ≥ 12 extreme warm events per year. While the amplitude of the temperature variations within the high frequency band (<48 hr) was greater in shallower sites, temperature changes on meteorological time scales (48 hr to 60 days) were coherent at all sites, suggesting the importance of coast-wide processes. The results of this study demonstrated that our high resolution numerical model captured biologically relevant temperature dynamics at different time scales and over a large spatial region, and yet still accurately predicted detailed temperature dynamics at specific nearshore sites. Thus, the model can provide important insights into coastal temperature dynamics that are potentially useful for conservation planning and understanding the implications of future change.
Estimating emissions from fishing vessels: a big Beidou data analytical approach
Authors: Zhang Kai , Lin Qin , Lian Feng , Feng Hongxiang
Published: July 2024

Fishing vessels are important contributors to global emissions in terms of greenhouse gases and air pollutants. However, few studies have addressed the emissions from fishing vessels on fishing grounds. In this study, a framework for estimating fishing vessel emissions, using a bottom-up dynamic method based on the big data from the Beidou VMS (vessel monitoring system) of fishing vessels, is proposed and applied to a survey of fishing vessel emissions in the East China Sea. The results of the study established a one-year emission inventory of fishing vessels in the East China Sea. This study was the first to use VMS data to estimate fishing vessel emissions in a fishing area, and the results will help to support the management of their carbon emissions.
Post-discharge follow-up of pediatric COVID-19 patients: insights into serological dynamics
Authors: Mahmoudi Shima , Pourakbari Babak , Shahbabaie Mohammad Ali , Sotoudeh Maryam , Jafari Erfaneh , Hosseinpour Sadeghi Reihaneh , Mamishi Setareh
Published: July 2024

Introduction

Limited data are available regarding SARS-CoV-2 serological response dynamics in pediatric patients with COVID-19, contributing to gaps in our understanding of the immune response in this population. This study aimed to investigate SARS-CoV-2 IgG seropositivity in patients diagnosed with COVID-19 during hospitalization and 2–4 weeks after discharge.

Methods

A cohort of patients, consisting of 31 individuals with confirmed acute COVID-19 infection and 27 diagnosed with Multisystem Inflammatory Syndrome in Children (MIS-C), was enrolled in the study. Follow-up clinic appointments were scheduled for 2–4 weeks post-discharge. During admission and follow-up, blood samples were collected from each patient for laboratory analysis. Anti-nucleoprotein SARS-CoV-2 IgG levels were determined using the Enzyme-Linked Immunosorbent Assay (ELISA) method.

Results

In this study, a cohort of 58 patients was examined. At admission, 52% (n = 14) of MIS-C patients and 10% (n = 3) of acute COVID-19 patients had positive SARS-CoV-2 IgG test. Only 48 cases were referred to the hospital, and follow-up data was available for 20 cases with MIS-C and 28 cases with acute COVID-19. All patients (n = 15) who initially tested positive for SARS-CoV-2 IgG at admission remained positive serology during follow-up (100%). Among the 33 patients who initially tested negative, 12 (37.5%) showed a positive serology result during follow-up, while 21 (62.5%) remained negative. Within this subgroup, 11 cases (44%) were diagnosed with acute COVID-19, and one patient (12.5%) presented with MIS-C. Fourteen cases with acute COVID-19 infection (56%) and seven cases with MIS-C (87.5%) consistently showed negative serology results throughout the study. During follow-up, the median lymphocyte count demonstrated a significant difference, with 0.96 × 109 cells per L (IQR: 0.75–3.0 × 109 cells per L) in the SARS-CoV-2 IgG-negative group and 2.9 × 109 cells per L (IQR = 1.33–7.22 × 109 cells per L) in the SARS-CoV-2 IgG-positive group (p-value = 0.03). Patients who demonstrated seropositivity during the follow-up were associated with a notably severe disease (p-value = 0.028).

Conclusion

Our study highlights the dynamic nature of SARS-CoV-2 IgG antibody responses in pediatric patients with COVID-19 infection. We observed a notable increase in seropositivity rates during follow-up. Furthermore, patients who were seropositive at follow-up demonstrated a severe disease course and lower lymphocyte counts compared to those with persistently negative serology. Our findings underscore the importance of longitudinal serological monitoring in understanding disease progression and immune response dynamics in pediatric COVID-19 cases.
Radiocapitellar joint plasty for missed monteggia fracture with radial head deformity in children: a retrospective study
Authors: Li Xuedong , Tian Huiling , Lu Kun , Jing Xiaobo
Published: July 2024

Purpose

The retrospective study reviewed the clinical and radiological outcomes of patients treated with radiocapitellar joint plasty.

Methods

10 children with missed Monteggia fracture (MMF) were reviewed. The average time from injury to operation was 20 months. The average age of children who underwent the operation was 10.5 years. 6 flat and 4 domed radial heads were included. 7 type I and 3 type III MMF were identified based on the Bado classification. All children with MMF were treated by open radial head reduction with radiocapitellar joint plasty and ulnar osteotomy (UO).

Results

The average union time was 4.9 ± 2.6 months. The average osteotomy angle to reduce the radial head was 15.7 ± 3.5°, and the average lengthening of the ulna was 8.2 ± 3.2 mm. The average preoperative flexion range of motion was 110.5 ± 9.1°, and the postoperative flexion range of motion was 138.8 ± 15.1° (p < 0.05). The average preoperative extension range of motion was 10.1 ± 3.2°, and the postoperative extension range of motion was 5.5 ± 3.3° (p < 0.05). The average preoperative pronation range of motion was 78.8 ± 8.7°, while the postoperative pronation range of motion was 81.1 ± 5.6° (p > 0.05). The average preoperative supination range of motion was 68.3 ± 9.7°, and the postoperative supination range of motion was 80.1 ± 7.8° (p < 0.05). The preoperative Kim score was 66.5 ± 10.9°, and the postoperative Kim score was 88.1 ± 12.6 (p < 0.05). The radial head was completely reduced in 9 patients, and subluxation in 1 patient. Osteoarthritis of the radiocapitellar joint was observed in 2 patients.

Conclusions

Radiocapitellar joint plasty is effective surgical intervention for MMF with radial head deformity. It yields favorable functional outcomes while ensuring continued radial head reduction.
Diabetes cardiomyopathy: targeted regulation of mitochondrial dysfunction and therapeutic potential of plant secondary metabolites
Authors: Pan Xianglong , Hao Erwei , Zhang Fan , Wei Wei , Du Zhengcai , Yan Guangli , Wang Xijun , Deng Jiagang , Hou Xiaotao
Published: July 2024

Diabetic cardiomyopathy (DCM) is a specific heart condition in diabetic patients, which is a major cause of heart failure and significantly affects quality of life. DCM is manifested as abnormal cardiac structure and function in the absence of ischaemic or hypertensive heart disease in individuals with diabetes. Although the development of DCM involves multiple pathological mechanisms, mitochondrial dysfunction is considered to play a crucial role. The regulatory mechanisms of mitochondrial dysfunction mainly include mitochondrial dynamics, oxidative stress, calcium handling, uncoupling, biogenesis, mitophagy, and insulin signaling. Targeting mitochondrial function in the treatment of DCM has attracted increasing attention. Studies have shown that plant secondary metabolites contribute to improving mitochondrial function and alleviating the development of DCM. This review outlines the role of mitochondrial dysfunction in the pathogenesis of DCM and discusses the regulatory mechanism for mitochondrial dysfunction. In addition, it also summarizes treatment strategies based on plant secondary metabolites. These strategies targeting the treatment of mitochondrial dysfunction may help prevent and treat DCM.
The atypical antipsychotics and sexual dysfunction: a pharmacovigilance-pharmacodynamic study
Authors: Cheng Yu , Chen Youjun , Zhao Xue , Mou Fan , Wang Wanying , Qian Ruiyi , Huang Jingjing , Li Huafang , Xu Qingqing , Yu Shunying
Published: July 2024

Background

Atypical antipsychotics (AAPs)-induced sexual dysfunction (SD) is a frequent issue in clinical practice, often underestimated by clinicians and not extensively researched. The current study aimed to quantify the strength of association between the use of different AAPs and SD using real-world data from the FDA Adverse Event Reporting System (FAERS), as well as investigate the receptor mechanisms that are involved.

Methods

Data from the FAERS database from the first quarter of 2004 to the third quarter of 2023 were queried through OpenVigil 2.1. Disproportionality analysis was estimated using the reporting odds ratio (ROR) and information component (IC) methods, and linear regression was used to investigate the relationship between ROR and receptor occupancy which was estimated using in vitro receptor binding profiles.

Results

Our analysis yielded 4839 reports that co-mentioned AAP and SD events, and the findings revealed statistical associations between 12 AAPs and SD. The highest signal value was identified for iloperidone reporting retrograde ejaculation with iloperidone (ROR = 832.09, ROR025 = 552.77; IC = 9.58, IC025 = 6.36), followed by compulsive sexual behavior with aripiprazole (ROR = 533.02, ROR025 = 435.90; IC = 7.30, IC025 = 5.97), and psychosexual disorder for aripiprazole (ROR = 145.80, ROR025 = 109.57; IC025 = 6.47, IC025 = 4.86). Different characteristics of the SD side effects in each AAPs were discovered after further data mining. Regression analysis revealed potential effects for receptor occupancy of D2, D3, and 5-HT1A receptors on ROR. However, no significant correlation persisted following sensitivity analyses.

Conclusion

This is the first study to investigate the AAP-SD associations by using FAERS. In this study, we report for the first time a significant association between aripiprazole and SD based on real-world data. The study suggests that different AAPs have varying levels of association with SD, and the D2, D3, and 5-HT1A receptor occupancy may contribute to potential mechanisms. The findings of this study warrant further validation of more studies and clinical causality assessment.
Sponge-derived alkaloid AP-7 as a sensitizer to cisplatin in the treatment of multidrug-resistant NSCLC via Chk1-dependent mechanisms
Authors: Guan Li , Liao Ya-Hui , Cao Meng-Xue , Liu Li-Yun , Xue Hai-Tao , Zhu Hong-Rui , Bian Chang-Hao , Yang Fan , Lin Hou-Wen , Liao Hong-Ze , Sun Fan
Published: July 2024

Multidrug resistance is a substantial obstacle in treating non-small cell lung cancer (NSCLC) with therapies like cisplatin (DDP)-based adjuvant chemotherapy and EGFR-tyrosine kinase inhibitors (TKIs). Aaptamine-7 (AP-7), a benzonaphthyridine alkaloid extracted from Aaptos aaptos sponge, has been shown to exhibit a broad spectrum of anti-tumor activity. However, the anti-cancer activity of AP-7 in combination with DDP and its molecular mechanisms in multidrug-resistant NSCLC are not yet clear. Our research indicates that AP-7 bolsters the growth inhibition activity of DDP on multidrug-resistant NSCLC cells. AP-7 notably disrupts DDP-induced cell cycle arrest and amplifies DDP-induced DNA damage effects in these cells. Furthermore, the combination of AP-7 and DDP downregulates Chk1 activation, interrupts the DNA damage repair-dependent Chk1/CDK1 pathway, and helps to overcome drug resistance and boost apoptosis in multidrug-resistant NSCLC cells and a gefitinib-resistant xenograft mice model. In summary, AP-7 appears to enhance DDP-induced DNA damage by impeding the Chk1 signaling pathway in multidrug-resistant NSCLC, thereby augmenting growth inhibition, both in vitro and in vivo. These results indicate the potential use of AP-7 as a DDP sensitizer in the treatment of multidrug-resistant NSCLC.
Divergent evolution of NLR genes in the genus Glycine: impacts of annuals and perennials’ life history strategies
Authors: Sultan Abu Bakar , Nawaz Humera , Saleem Fozia , Nawaz Sehar , Danial Muhammad , Iftikhar Romana , Maqsood Umer , Areej Amna , Shakoor Sidra , Aljarba Nada H. , Maqbool Rizwan , Rizwan Muhammad , Serfraz Saad
Published: July 2024

Within the family Fabaceae, the genus Glycine is composed of two subgenera annuals (2n=40) and perennials. This life strategy transition may have differentially affected the evolution of various gene families. Its cultivated species G. max has high level of susceptibility to major pathogens including viruses, bacteria and fungi. Understanding nucleotide-binding domain leucine-rich repeat (NLR) genes evolution in soybean is of paramount importance due to their central role in plant immunity and their potential in improving disease resistance in soybean cultivars. In this study, we investigated the significance of this annual-perennial transition on the macroevolution of NLR genes in the genus Glycine. Our results reveal a remarkable distinction between annual species such as Glycine max and Glycine soja, which exhibit an expanded NLRome compared to perennial species (G. cyrtoloba, G. stenophita, G. dolichocarpa, G. falcata, G. syndetika, G. latifolia and G. tomentella). Our evolutionary timescale analysis pinpoints recent accelerated gene duplication events for this expansion, which occurred between 0.1 and 0.5 million years ago, driven predominantly by lineage-specific and terminal duplications. In contrast, perennials initially experienced significant contraction during the diploidisation phase following the Glycine-specific whole-genome duplication event (~10 million years ago). Despite the reduction in the NLRome, perennial lineages exhibit a unique and highly diversified repertoire of NLR genes with limited interspecies synteny. The investigation of gene gain and loss ratios revealed that this diversification resulted from the birth of novel genes following individual speciation events. Among perennials, G. latifolia, a well-known resistance resource, has the highest ratio of these novel genes in the tertiary gene pool. Our study suggests evolutionary mechanisms, including recombination and transposition, as potential drivers for the emergence of these novel genes. This study also provides evidence for the unbalanced expansion of the NLRome in the Dt subgenome compared with the At subgenome in the young allopolyploid G. dolichocarpa. To the best of our knowledge, this is the first study to investigate the effect of annuality and perenniality life transition on the evolution of NLR genes in the genus Glycine to identify its genomics resources for improving the resistance of soybean crop with global importance on the economy and food security.
Enhancing lucerne (Medicago sativa) yield and nutritional quality: a meta-analysis of fertilization types and environmental factors in China
Authors: Zhang Jiachang , Mao Yanting , Wang Gang , Luo Dong , Cao Quan , Siddique Kadambot H. M. , Mirzaei Morad , Saunders Matthew , Aghamir Fateme , Radicetti Emanuele , Xiang Yangzhou , Zhang Qingping , Li Yuan , Shen Yuying
Published: July 2024

Introduction

Lucerne (Medicago sativa), is a cornerstone of China’s livestock industry, however, due to the backward agronomic strategies and technology, lucerne in China faces cultivation challenges that result in lower productivity and quality than global standards. Therefore, we undertook a meta-analysis to evaluate the impact of five distinct fertilization types on lucerne yield and nutritional quality in various locations in China. The fertilizer practices included manure application, combined mineral fertilizer and manure application (FM), biological fertilizer application, unbalanced application of two or more mineral fertilizer types, and balanced mineral fertilizer application. Furthermore, we investigate influential factors of yield and quality of lucerne under fertilization, including climatic variables (mean annual precipitation, mean annual temperature), initial soil properties (soil organic carbon; total nitrogen, pH), and agronomic factors (seeding rate, harvest frequency, and lucerne stand age).

Methods

Our study analyzed 53 published papers to discern the most beneficial fertilizer for enhancing lucerne yield and nutritional quality.

Results and discussion

The results showed that the fertilizer practices, on average, significantly improved yield by 31.72% and crude protein content by 11.29%, with FM emerging as the most effective, this is because mineral fertilizers provide available nutrients for lucerne, manure provides essential organic matter for microorganisms and improve soil properties. In addition, the fertilizer practices significantly reduced neutral and acid detergent fiber contents by 6.28% and 8.50%, respectively, while increasing ash content and relative feeding value. Furthermore, climatic variables, soil properties, and planting system factors such as sowing date and harvest frequency significantly affected yield and nutritional quality. The practical implications of our results emphasize the need for balanced and strategic fertilizer application to optimize lucerne production and highlight the potential to adjust cultivation practices according to environmental conditions. Balanced and strategic fertilizer application can simultaneously improve soil properties, enhance soil carbon sequestration, and reduce the emission of greenhouse gases from the soil, which is a vital measure for realizing sustainable agricultural development.
Design and experimental research of air-assisted nozzle for pesticide application in orchard
Authors: Ou Mingxiong , Zhang Jiayao , Du Wentao , Wu Minmin , Gao Tianyu , Jia Weidong , Dong Xiang , Zhang Tie , Ding Suming
Published: July 2024

This article reports the design and experiment of a novel air-assisted nozzle for pesticide application in orchard. A novel air-assisted nozzle was designed based on the transverse jet atomization pattern. This article conducted the performance and deposition experiments and established the mathematical model of volume median diameter (D50) and liquid flow rate with the nozzle design parameters. The D50 of this air-assisted nozzle ranged from 52.45 μm to 113.67 μm, and the liquid flow rate ranged from 142.6 ml/min to 1,607.8 ml/min within the designed conditions. These performances meet the low-volume and ultra-low-volume pesticide application in orchard. The droplet deposition experiment results demonstrated that the droplet coverage distribution in different layers and columns is relatively uniform, and the predicted value of spray penetration (SP) numbers SPiA, SPiB, and SPiC (i = 1, 2, and 3) are approximately 70%, 60%, and 70%, respectively. The droplet deposits on the foliage of the canopy (inside and outside) uniformly bring benefit for plant protection and pesticide saving. Compared with the traditional air-assisted nozzle that adopts a coaxial flow atomization pattern, the atomization efficiency of this air-assisted nozzle is higher. Moreover, the nozzle air pressure and liquid flow rate are considerably lower and greater than the traditional air-assisted nozzle, and these results proved that this air-assisted nozzle has great potential in orchard pesticide application. The relationship between the D50 and nozzle liquid pressure of this air-assisted nozzle differs from that of traditional air-assisted nozzles due to the atomization pattern and process. While this article provides an explanation for this relationship, further study about the atomization process and mechanism is needed so as to improve the performance.
Cognitive stimulation in socioeconomically disadvantaged children with neurodevelopmental disorders: a case series
Authors: Rodríguez-Prieto Pablo , Giral-Oliveros Nathalia Alejandra , Simpson Ian Craig , Ibáñez-Alfonso Joaquín A.
Published: July 2024

Introduction

Research shows how conditions in socio-economically disadvantaged environments can be a risk factor for children’s cognitive development. Consequently, children with neurodevelopmental disorders growing up in such environments face a double challenge. This study analyzed the effect of a comprehensive cognitive stimulation program on 4 single case studies comprising children with neurodevelopmental disorders from Guatemala.

Methodology

A descriptive study was conducted, using a case series approach, consisting of four participants with neurodevelopmental disorders, and a neurotypical group of 126 children. Participants in the neurotypical group were randomly assigned to either a control or experimental reference group. Cognitive assessments were performed pre- and post-intervention for all participants. Children in the experimental group received a comprehensive cognitive stimulation program between assessments. Two participants with neurodevelopmental disorders also received the stimulation program while the other two children with neurodevelopmental disorders performed the same task as the control group, specifically, regular reading activities.

Results

The experimental group exhibited a significant improvement in executive functions (inhibition, flexibility, and planning). The two experimental group children with neurodevelopmental disorders exhibited improved social cognition, showing a larger improvement compared to neurotypical children in their group, as well as compared to the two control children. However, although the reading program improved the language skills of the neurotypical control group, the children with neurodevelopmental disorders did not show as much improvement.

Conclusion

These results suggest that specialized interventions are beneficial for children from socio-economically disadvantaged backgrounds, but importantly, may have a larger impact on children with neurodevelopmental disorders.
Fear of disease progression, self-management efficacy, and family functioning in patients with breast cancer: a cross-sectional relationship study
Authors: Zhuang Jiaru , Wang Yuan , Wang Shan , Hu Renjing , Wu Yibo , Chen Ling
Published: July 2024

Introduction

Fear of disease progression (FoP) has been identified as one of the most prevalent unmet needs among breast cancer patients in recent years. The aim of this study was to examine FoP in patients with breast cancer and explore its associations with demographic and clinical characteristics, self-management efficacy, and family functioning. We also aimed to create a clinically-relevant prediction model based off of these factors (i.e., a “nomogram”) to help identify patients’ probability of experiencing high FoP.

Methods

A cross-sectional survey of breast cancer in patients at the Affiliated Hospital of Jiangnan University was conducted from June 2023 to February 2024. The study included the Demographic and Clinical Characteristics Questionnaire, the Fear of Disease Progression Scale (FoP-Q-SF), the Chinese Self-Management Efficacy Scale for Cancer Patients (C-SUPPH), and the Family Care Index Questionnaire (APGAR). Data analysis included descriptive statistics, independent-samples t-test, one-way ANOVA, Pearson correlation analysis, and multiple regression analysis. A nomogram was constructed based on multiple regression results and the model performance was evaluated.

Results

A total of 151 breast cancer patients were enrolled in the study. The mean (standard deviation) FoP score of the patients was 35.87 ± 9.24. The average score of C-SUPPH was 96.97 ± 17.29, and the average score of APGAR was 6.74 ± 2.98. Pearson correlation analysis showed that FoP was negatively correlated with self-management efficacy (r = −0.544, p < 0.01) and family functioning (r = −0.730, p < 0.01). Multiple regression analysis showed that age (B = −4.038), self-management efficacy (B = −0.085) and family functioning (B = −1.972) were significantly related to FoP, and together explained 36% of FoP variation (R2 = 0.360, F = 20.50, p < 0.001). The nomogram of these variables showed satisfactory prediction performance [the Bootstrap Correction Consistency Index (C-index) = 0.872]. According to previous studies, a C-index of >0.70 indicates that the model is acceptable.

Conclusion

We found that greater fear of cancer progression (FoP) was associated with younger age, lower self-management efficacy and poorer family functioning in breast cancer patients. Based on these variables, our exploratory prediction model should be further investigated in order to help identify breast cancer patients who may be at highest risk of experiencing high FoP.
Intact painful sensation but enhanced non-painful sensation in individuals with autistic traits
Authors: Qian Huiling , Shao Min , Wei Zilong , Zhang Yudie , Liu Shuqin , Chen Lu , Meng Jing
Published: July 2024

Somatosensory abnormalities are commonly recognized as diagnostic criteria in autism spectrum disorder (ASD), and may also exist in individuals with autistic traits. The present research included two studies to explore the painful and non-painful sensation and their cognitive-neurological mechanisms of individuals with autistic traits. Study 1 included 358 participants to assess the relationship between autistic traits and pain/non-pain sensitivities using questionnaires: the Autism Spectrum Quotient (AQ), the Pain Sensitivity Questionnaire, and the Highly Sensitive Person Scale, respectively. Study 1 found that autistic traits were positively correlated with non-pain sensitivity, but not associated with pain sensitivity. Study 2 recruited 1,167 participants whose autistic traits were assessed using the AQ. Subsequently, thirty-three participants who scored within the top 10% and bottom 10% on the AQ were selected into High-AQ and Low-AQ groups, respectively, to explore the cognitive-neural responses of individuals with autistic traits to both painful and non-painful stimuli with event-related potential (ERP) technology. Results of Study 2 showed that the High-AQ group showed higher intensity ratings, more negative emotional reactions, and larger N1 amplitudes than the Low-AQ group to the non-painful stimuli, but no difference of response to the painful stimuli was found between High-AQ and Low-AQ groups. These findings suggest that individuals with autistic traits may experience enhanced non-painful sensation but intact painful sensation.
Determinants of thinness among school adolescents in Legehida district, Amhara region, north east Ethiopia: an unmatched case-control study
Authors: Ali Awol Assen , Adugna Dessalegn Tamiru , Ayele Wolde Melese , Tadesse Sisay Eshete , Mekonnen Tefera Chane , Wudu Muluken Amare
Published: July 2024

Background

Adolescence is a critical stage of human growth and development, and adolescent nutritional status is a significant predictor of health outcomes. However, adolescents in developing countries, including Ethiopia, have received little attention from nutrition-related programs in recent decades. Consequently, malnutrition among adolescents is a widespread issue in these regions.

Objective

The study aimed to identify the determinants of thinness among school adolescents in the Legehida district of South Wollo Zone, Northeastern Ethiopia.

Methods

A school-based, unmatched case-control study was conducted from January 20 to February 2, 2019. A total of 525 school-aged adolescents (175 cases and 350 controls) from the Legehida district were enrolled using a multistage sampling technique. Data were collected through interview-administered questionnaires and anthropometric measurements. EpiData version 3.1 was used for data entry, while Anthroplus software was employed for anthropometric measurement entry and analysis. The data were then exported to SPSS version 25 for further analysis. Bivariate and multivariable logistic regression analyses were performed to assess the determinants of adolescent thinness.

Results

In this study, thinness among school adolescents was significantly associated with several factors: the absence of a latrine at home [AOR = 8.2, 95% CI (3.8, 8.17)], meal skipping per day [AOR = 3.1, 95% CI (1.2, 7.3)], inadequate consumption of fruits and vegetables [AOR = 7.5, 95% CI (3.9, 14.5)], having more than four household members [AOR = 13.6, 95% CI (7.1, 26)], and the consumption of unsafe water [AOR = 7.7, 95% CI (3.8, 15.6)].

Conclusions and recommendations

The absence of latrines and access to clean water, dietary factors, and family size emerged as significant contributors to adolescent thinness in this study. Addressing the nutritional challenges faced by adolescents will require collaborative efforts across sectors.