bluuebunny/crossref_metadata_2025 huggingface dataset:
Misfolded alpha-synuclein detection by RT-QuIC in dementia with lewy bodies: a systematic review and meta-analysis
Authors: Peña-Bautista Carmen , Kumar Rakesh , Baquero Miguel , Johansson Jan , Cháfer-Pericás Consuelo , Abelein Axel , Ferreira Daniel
Published: May 2023

Introduction: Dementia with Lewy Bodies (DLB) is the second most common cause of neurodegenerative dementia after Alzheimer’s disease (AD), but the field is still lacking a specific biomarker for its core pathology: alpha synuclein (α-syn). Realtime quaking induced conversion (RT-QuIC) has recently emerged as a strong biomarker candidate to detect misfolded α-syn in DLB. However, the variability in the parameters of the technique and the heterogeneity of DLB patients make the reproducibility of the results difficult. Here, we provide an overview of the state-of-the-art research of α-syn RT-QuIC in DLB focused on: (1) the capacity of α-syn RT-QuIC to discriminate DLB from controls, Parkinson’s disease (PD) and AD; (2) the capacity of α-syn RT-QuIC to identify prodromal stages of DLB; and (3) the influence of co-pathologies on α-syn RT-QuIC’s performance. We also assessed the influence of different factors, such as technical conditions (e.g., temperature, pH, shaking-rest cycles), sample type, and clinical diagnosis versus autopsy confirmation.

Methods: We conducted a systematic review following the PRISMA guidelines in August 2022, without any limits in publication dates. Search terms were combinations of “RT-QuIC” and “Lewy Bodies,” “DLB” or “LBD”.

Results: Our meta-analysis shows that α-syn RT-QuIC reaches very high diagnostic performance in discriminating DLB from both controls (pooled sensitivity and specificity of 0.94 and 0.96, respectively) and AD (pooled sensitivity and specificity of 0.95 and 0.88) and is promising for prodromal phases of DLB. However, the performance of α-syn RT-QuIC to discriminate DLB from PD is currently low due to low specificity (pooled sensitivity and specificity of 0.94 and 0.11). Our analysis showed that α-syn RT-QuIC’s performance is not substantially influenced by sample type or clinical diagnosis versus autopsy confirmation. Co-pathologies did not influence the performance of α-syn RT-QuIC, but the number of such studies is currently limited. We observed technical variability across published articles. However, we could not find a clear effect of technical variability on the reported results.

Conclusion: There is currently enough evidence to test misfolded α-syn by RT-QuIC for clinical use. We anticipate that harmonization of protocols across centres and advances in standardization will facilitate the clinical establishment of misfolded α-syn detection by RT-QuIC.
PCE simulation toolkit: a platform for perceptual crossing experiment research
Authors: Sangati Federico , Fukushima Rui
Published: May 2023

The Perceptual Crossing Experiment (PCE) has been the object of study for over a decade, and aims at explaining how we perceive, interact with, and understand each other in real-time. In addition to human participant studies, a number of computational models have investigated how virtual agents can solve this task. However, the set of implementation choices that has been explored to date is rather limited, and the large number of variables that can be used make it very difficult to replicate the results. The main objective of this paper is to describe the PCE Simulation Toolkit we have developed and published as an open-source repository on GitHub. We hope that this effort will help make future PCE simulation results reproducible and advance research in the understanding of possible behaviors in this experimental paradigm. At the end of this paper, we present two case studies of evolved agents that demonstrate how parameter choices affect the simulations.
Structural and functional differences of the thalamus between drug-naïve Parkinson’s disease motor subtypes
Authors: Chen Yubing , Guo Zhiying , Wang Yajie , Yin Hangxing , Zhang Shugang , Liu Weiguo
Published: May 2023

Objective

The thalamus is an integrative hub of motor circuits in Parkinson’s disease (PD). This study aimed to investigate the alterations of structure and functional connectivity (FC) of the thalamic subregions in the tremor-dominant (TD) subtype and the postural instability and gait difficulty (PIGD) subtype in PD.

Methods

A total of 59 drug-naïve patients (24 TD and 35 PIGD) and 37 healthy controls were recruited. The volumes of the thalamus and the thalamic subregions were calculated using FreeSurfer. Functional connectivity (FC) analysis of the resting-state functional MRI (rsfMRI) was conducted on the thalamic subregions. Finally, the altered structure and FC were used for correlation analysis with clinical motor scores and for further motor subtypes differentiation.

Results

The volumes of the left posterior parietal thalamus (PPtha) in TD patients were significantly lower than those of PIGD patients. Compared with PIGD patients, TD patients exhibited higher FC between the thalamic subregions, the left middle temporal gyrus (MTG), the right dorsolateral superior frontal gyrus (SFGdl), the left middle occipital gyrus (MOG), and the right superior temporal gyrus (STG). Compared with HCs, TD patients showed higher FC between the thalamic subregions and the right SFGdl, as well as the left MOG. Compared with HCs, PIGD patients showed lower FC between the thalamic subregions and the left MTG. In addition, the altered FC was closely related to clinical symptoms and performed high-discriminative power in differentiating the motor subtypes.

Conclusion

Increased FC between the thalamic subregions and the sensory cortices in TD patients may indicate a better compensatory capacity for impairment of sensory information integration than that in PIGD patients. The altered FC between the thalamus and the MTG was a potential biomarker for the distinction of the PD motor subtypes.
Percutaneous balloon compression of trigeminal ganglion under conscious sedation local anesthesia for the treatment of primary trigeminal neuralgia—A prospective cohort study
Authors: Zhi Dou , Guo Yuna , He Liangliang , Yang Liqiang
Published: May 2023

Introduction

Trigeminal neuralgia is a debilitating condition that can significantly impair the quality of life of affected individuals. Percutaneous balloon compression (PBC) has been established as an effective treatment for this condition. However, the use of general anesthesia during the procedure poses challenges to achieving the desired degree of nerve damage without causing excessive numbness. In this study, we aimed to evaluate the feasibility and efficacy of performing PBC under conscious sedation of local anesthesia.

Methods

We improved the surgical procedure for PBC by administering intraganglionic lidocaine 0.2% with fine needle aspiration to achieve conscious sedation. This allowed the operator to determine the degree of nerve damage in real time through the tactile test. We conducted a clinical observation of 87 patients who underwent PBC under conscious sedation of local anesthesia. We evaluated the intraoperative blood pressure and heart rate changes, postoperative facial pain relief, and occurrence of complications such as severe facial numbness, irreversible keratitis, vision loss, and masticatory muscle weakness.

Results

All 87 patients achieved immediate relief of facial pain after undergoing PBC under conscious sedation of local anesthesia. The intraoperative blood pressure and heart rate changes were <20% of the baseline value. No patient experienced severe facial numbness or developed irreversible keratitis, vision loss, or masticatory muscle weakness.

Discussion

Our findings suggest that PBC under wide-awake local anesthesia is a safe and effective treatment for trigeminal neuralgia. The use of conscious sedation of local anesthesia during the procedure allows the operator to achieve the desired degree of nerve damage without causing excessive numbness. This can lead to long-term pain relief and improved quality of life for patients with trigeminal neuralgia.
Crossmodal interactions in human learning and memory
Authors: Murray Carolyn A. , Shams Ladan
Published: May 2023

Most studies of memory and perceptual learning in humans have employed unisensory settings to simplify the study paradigm. However, in daily life we are often surrounded by complex and cluttered scenes made up of many objects and sources of sensory stimulation. Our experiences are, therefore, highly multisensory both when passively observing the world and when acting and navigating. We argue that human learning and memory systems are evolved to operate under these multisensory and dynamic conditions. The nervous system exploits the rich array of sensory inputs in this process, is sensitive to the relationship between the sensory inputs, and continuously updates sensory representations, and encodes memory traces based on the relationship between the senses. We review some recent findings that demonstrate a range of human learning and memory phenomena in which the interactions between visual and auditory modalities play an important role, and suggest possible neural mechanisms that can underlie some surprising recent findings. We outline open questions as well as directions of future research to unravel human perceptual learning and memory.
Visual expertise modulates resting-state brain network dynamics in radiologists: a degree centrality analysis
Authors: Wang Hongmei , Yao Renhuan , Zhang Xiaoyan , Chen Chao , Wu Jia , Dong Minghao , Jin Chenwang
Published: May 2023

Visual expertise reflects accumulated experience in reviewing domain-specific images and has been shown to modulate brain function in task-specific functional magnetic resonance imaging studies. However, little is known about how visual experience modulates resting-state brain network dynamics. To explore this, we recruited 22 radiology interns and 22 matched healthy controls and used resting-state functional magnetic resonance imaging (rs-fMRI) and the degree centrality (DC) method to investigate changes in brain network dynamics. Our results revealed significant differences in DC between the RI and control group in brain regions associated with visual processing, decision making, memory, attention control, and working memory. Using a recursive feature elimination-support vector machine algorithm, we achieved a classification accuracy of 88.64%. Our findings suggest that visual experience modulates resting-state brain network dynamics in radiologists and provide new insights into the neural mechanisms of visual expertise.
AGE-RAGE axis culminates into multiple pathogenic processes: a central road to neurodegeneration
Authors: Bhattacharya Reshmee , Alam Mohammad Rizwan , Kamal Mohammad Azhar , Seo Kyung Jin , Singh Laishram Rajendrakumar
Published: May 2023

Advanced glycation end-products (AGEs; e.g., glyoxal, methylglyoxal or carboxymethyl-lysine) are heterogenous group of toxic compounds synthesized in the body through both exogenous and endogenous pathways. AGEs are known to covalently modify proteins bringing about loss of functional alteration in the proteins. AGEs also interact with their receptor, receptor for AGE (RAGE) and such interactions influence different biological processes including oxidative stress and apoptosis. Previously, AGE-RAGE axis has long been considered to be the maligning factor for various human diseases including, diabetes, obesity, cardiovascular, aging, etc. Recent developments have revealed the involvement of AGE-RAGE axis in different pathological consequences associated with the onset of neurodegeneration including, disruption of blood brain barrier, neuroinflammation, remodeling of extracellular matrix, dysregulation of polyol pathway and antioxidant enzymes, etc. In the present article, we attempted to describe a new avenue that AGE-RAGE axis culminates to different pathological consequences in brain and therefore, is a central instigating component to several neurodegenerative diseases (NGDs). We also invoke that specific inhibitors of TIR domains of TLR or RAGE receptors are crucial molecules for the therapeutic intervention of NGDs. Clinical perspectives have also been appropriately discussed.
Prophylactic cranial irradiation for extensive stage small cell lung cancer: a meta-analysis of randomized controlled trials
Authors: Wang Ziyi , Chen Liang , Sun Lu , Cai Feng , Yang Qiwei , Hu Xiaohai , Fu Qiang , Chen Weiyang , Li Peiwei , Li Wenya
Published: May 2023

Background

Previous studies have demonstrated that prophylactic cranial irradiation (PCI) could reduce the risk of brain metastases and prolong the overall survival (OS) of patients with small cell lung cancer (SCLC). However, it remains controversial whether the efficacy and safety of PCI would be subjected to the different characteristics of patients with extensive stage of SCLC. This meta-analysis aims to evaluate the efficacy and safety of PCI in patients with extensive stage SCLC.

Methods

PubMed, Embase, and the Cochrane Library were searched for relevant studies from inception to May, 2021. Hazard ratios (HRs) were used to measure the OS and progression-free survival (PFS), and relative risks (RRs) were employed to calculate the incidence of brain metastases, survival rate, and adverse events. Summary results were pooled using random-effect models.

Results

There were 1215 articles identified, and 15 trials were included, with a total of 1,623 participants. Patients who received PCI did not result in significantly improved OS [HR=0.87, 95%CI (0.70, 1.08) p=0.417] and PFS [HR=0.81, 95%CI (0.69, 0.95) p=0.001], compared with those who did not receive PCI, while patients who received PCI had a significantly decreased incidence of brain metastases [RR=0.57, 95%CI (0.45, 0.74), p<0.001]. PCI group showed no improvements in 2-year (RR=1.03, p=0.154), 3-year (RR=0.97, p=0.072), 4-year (RR=0.71, p=0.101) and 5-year survival rates (RR=0.32, p=0.307), compared with non-PCI group, whereas the overall RR indicated that PCI was associated with a higher 1-year survival rate [RR=1.46, 95%CI (1.08, 1.97), p=0.013]. In addition, PCI treatment was shown to be associated with increased incidence of adverse events, including fatigue, dermatitis, anorexia, nausea, vomiting, malaise, and cognitive impairment.

Conclusion

This meta-analysis suggests that PCI can reduce the incidence of brain metastases in extensive stage SCLC. Although PCI has no significant effect on the OS, it improves 1-year survival in patients with extensive stage SCLC. However, PCI does not significantly affect 2,3,4,5-year survival and may result in a significantly increased risk of adverse events.
Advances in efficacy prediction and monitoring of neoadjuvant immunotherapy for non-small cell lung cancer
Authors: Wang Yunzhen , Huang Sha , Feng Xiangwei , Xu Wangjue , Luo Raojun , Zhu Ziyi , Zeng Qingxin , He Zhengfu
Published: May 2023

The use of immune checkpoint inhibitors (ICIs) has become mainstream in the treatment of non-small cell lung cancer (NSCLC). The idea of harnessing the immune system to fight cancer is fast developing. Neoadjuvant treatment in NSCLC is undergoing unprecedented change. Chemo-immunotherapy combinations not only seem to achieve population-wide treating coverage irrespective of PD-L1 expression but also enable achieving a pathological complete response (pCR). Despite these recent advancements in neoadjuvant chemo-immunotherapy, not all patients respond favorably to treatment with ICIs plus chemo and may even suffer from severe immune-related adverse effects (irAEs). Similar to selection for target therapy, identifying patients most likely to benefit from chemo-immunotherapy may be valuable. Recently, several prognostic and predictive factors associated with the efficacy of neoadjuvant immunotherapy in NSCLC, such as tumor-intrinsic biomarkers, tumor microenvironment biomarkers, liquid biopsies, microbiota, metabolic profiles, and clinical characteristics, have been described. However, a specific and sensitive biomarker remains to be identified. Recently, the construction of prediction models for ICI therapy using novel tools, such as multi-omics factors, proteomic tests, host immune classifiers, and machine learning algorithms, has gained attention. In this review, we provide a comprehensive overview of the different positive prognostic and predictive factors in treating preoperative patients with ICIs, highlight the recent advances made in the efficacy prediction of neoadjuvant immunotherapy, and provide an outlook for joint predictors.
Glycemia and associated factors in a pediatric population in Mexico
Authors: Lares-Villaseñor E. , Salazar-García S. , Cossío-Torres P. E. , Medina-Jasso D. L. , Aradillas-García C. , Portales-Pérez D. P. , Vargas-Morales J. M.
Published: May 2023

Aims

In this study, we evaluated the association of sociodemographic, lifestyle and cardiometabolic factors with blood glucose levels in children and adolescents in Mexico.

Methods

An analytical cross-sectional study of 642 children and adolescents aged 6 to 19 years from different educational centers located in municipalities of the state of San Luis Potosí, Mexico, was carried out. Pearson χ2 and Spearman correlation tests and multiple linear regression models were used to evaluate the associations of the variables with glycemia.

Results

The prevalence of prediabetes was 8.0% in both sexes. Male participants were more likely to develop hyperglycemia than female participants (OR 2.7, 95% CI: 1.5–5.0). The variables associated with glucose levels were male sex, high socioeconomic status, inadequate diet, high blood pressure, and increased total cholesterol, LDL cholesterol, and triglycerides, which also explained up to 15.6% (p < 0.05) of the variability in glucose concentrations.

Conclusion

The detection of sociodemographic, lifestyle and cardiometabolic factors in children and adolescents will contribute to the implementation of prevention strategies for cardiometabolic diseases, among which prediabetes is common.
Ameliorative effect of Aconite aqueous extract on diarrhea is associated with modulation of the gut microbiota and bile acid metabolism
Authors: Zhang Dandan , Cheng Hao , Zhang Yuxi , Zhou Yaochuan , Wu Jing , Liu Juan , Feng Wuwen , Peng Cheng
Published: May 2023

Introduction: Aconite is a form of traditional Chinese medicine (TCM) that has been widely used to treat diarrhea for thousands of years. However, it is not clear whether the anti-diarrhea role of aconite aqueous extract (AA) is associated with regulation of the gut microbiota or with bile acid (BA) metabolism. This study aimed to confirm whether AA exerts its anti-diarrhea effects by regulating the gut microbiota and BA metabolism.

Methods: The therapeutic effect of AA in a mouse model of diarrhea was measured based on analysis of body weight, fecal water content, diarrhea scores, intestinal propulsion rate, colonic pathology, and colonic immunohistochemistry. In addition, 16S rRNA high-throughput sequencing was conducted to analyze the effect of AA on the gut microbiota, and targeted metabolomics was employed to analyze the effect of AA on metabolism of BAs.

Results: The results showed that treatment with AA reduced fecal water content and diarrhea scores, inhibited intestinal propulsion rate and pathological changes in the colon, and increased AQP3 and AQP4 content in the colon. In addition, AA was found to be capable of regulating the gut microbiota. Effects included increasing its richness (according to the ACE and Chao1 indices); altering the gut microbiota community structure (PCA, PCoA, and NMDS); increasing the relative abundance of norank_f_Muribaculaceae, Ruminococcus, Lachnospiraceae_NK4A136_group, Prevotellaceae_UCG-001, and norank_f_norank_o_Clostridia_UCG-014; and decreasing the relative abundance of Escherichia-Shigella, unclassified_f_Ruminococcaceae, Ruminococcus_torques_group, and Parasutterella. More importantly, AA significantly increased fecal TCA (a primary BA) and DCA, LCA, GDCA, dehydro-LCA, and 12-keto-LCA (secondary BAs), thus restoring BA homeostasis. Moreover, AA increased the ratios of DCA/CA, DCA/TCA, and LCA/CDCA and decreased the ratios of TLCA/LCA, GLCA/LCA, and TUDCA/UDCA.

Conclusion: The anti-diarrhea effect of AA was associated with restoration of the gut microbiota and BA metabolism-related homeostasis. The results of this study provide insights into the application of AA and the treatment of diarrhea.
MyoD-induced reprogramming of human fibroblasts and urinary stem cells in vitro: protocols and their applications
Authors: Rossi Rachele , Torelli Silvia , Ala Pierpaolo , Weston William , Morgan Jennifer , Malhotra Jyoti , Muntoni Francesco
Published: May 2023

The conversion of fibroblasts into myogenic cells is a powerful tool to both develop and test therapeutic strategies and to perform in-depth investigations of neuromuscular disorders, avoiding the need for muscle biopsies. We developed an easy, reproducible, and high-efficiency lentivirus-mediated transdifferentiation protocol, that can be used to convert healthy donor fibroblasts and a promising new cellular model, urinary stem cells (USCs), into myoblasts, that can be further differentiated into multinucleated myotubes in vitro. Transcriptome and proteome profiling of specific muscle markers (desmin, myosin, dystrophin) was performed to characterize both the myoblasts and myotubes derived from each cell type and to test the transdifferentiation-inducing capacity of MYOD1 in fibroblasts and USCs. Specifically, the Duchenne muscular dystrophy (DMD) transcripts and proteins, including both the full-length Dp427 and the short Dp71 isoform, were evaluated. The protocol was firstly developed in healthy donor fibroblasts and USCs and then used to convert DMD patients’ fibroblasts, with the aim of testing the efficacy of an antisense drug in vitro. Technical issues, limitations, and problems are explained and discussed. We demonstrate that MyoD-induced-fibroblasts and USCs are a useful in vitro model of myogenic cells to investigate possible therapies for neuromuscular diseases.
Estrogens, age, and, neonatal stress: panic disorders and novel views on the contribution of non-medullary structures to respiratory control and CO2 responses
Authors: Kinkead Richard , Ambrozio-Marques Danuzia , Fournier Stéphanie , Gagnon Marianne , Guay Loralie Mei
Published: May 2023

CO2 is a fundamental component of living matter. This chemical signal requires close monitoring to ensure proper match between metabolic production and elimination by lung ventilation. Besides ventilatory adjustments, CO2 can also trigger innate behavioral and physiological responses associated with fear and escape but the changes in brain CO2/pH required to induce ventilatory adjustments are generally lower than those evoking fear and escape. However, for patients suffering from panic disorder (PD), the thresholds for CO2-evoked hyperventilation, fear and escape are reduced and the magnitude of those reactions are excessive. To explain these clinical observations, Klein proposed the false suffocation alarm hypothesis which states that many spontaneous panics occur when the brain’s suffocation monitor erroneously signals a lack of useful air, thereby maladaptively triggering an evolved suffocation alarm system. After 30 years of basic and clinical research, it is now well established that anomalies in respiratory control (including the CO2 sensing system) are key to PD. Here, we explore how a stress-related affective disorder such as PD can disrupt respiratory control. We discuss rodent models of PD as the concepts emerging from this research has influenced our comprehension of the CO2 chemosensitivity network, especially structure that are not located in the medulla, and how factors such as stress and biological sex modulate its functionality. Thus, elucidating why hormonal fluctuations can lead to excessive responsiveness to CO2 offers a unique opportunity to gain insights into the neuroendocrine mechanisms regulating this key aspect of respiratory control and the pathophysiology of respiratory manifestations of PD.
Coarse spatial resolution remote sensing data with AVHRR and MODIS miss the greening area compared with the Landsat data in Chinese drylands
Authors: Zhang Jianshuang , Zhang Yangjian , Cong Nan , Tian Li , Zhao Guang , Zheng Zhoutao , Gao Jie , Zhu Yixuan , Zhang Yu
Published: May 2023

The warming-wetting climates in Chinese drylands, together with a series of ecological engineering projects, had caused apparent changes to vegetation therein. Regarding the vegetation greening trend, different remote sensing data had yielded distinct findings. It was critical to evaluate vegetation dynamics in Chinese drylands using a series of remote sensing data. By comparing the three most commonly used remote sensing datasets [i.e., MODIS, Advanced Very High Resolution Radiometer (AVHRR), and Landsat], this study comprehensively investigated vegetation dynamics for Chinse drylands. All three remote sensing datasets exhibited evident vegetation greening trends from 2000 to 2020 in Chinese drylands, especially in the Loess Plateau and Northeast China. However, Landsat identified the largest greening areas (89.8%), while AVHRR identified the smallest greening area (58%). The vegetation greening areas identified by Landsat comprise more small patches than those identified by MODIS and AVHRR. The MODIS data exhibited a higher consistency with Landsat than with AVHRR in terms of detecting vegetation greening areas. The three datasets exhibited high consistency in identifying vegetation greening in Northeast China, Loess Plateau, and Xinjiang. The percentage of inconsistent areas among the three datasets was 39.56%. The vegetation greening areas identified by Landsat comprised more small patches. Sensors and the atmospheric effect are the two main reasons responsible for the different outputs from each NDVI product. Ecological engineering projects had a great promotion effect on vegetation greening, which can be detected by the three NDVI datasets in Chinese drylands, thereby combating desertification and reducing dust storms.
Antifungal activity of volatile and non-volatile metabolites of endophytes of Chloranthus elatior Sw.
Authors: Santra Hiran Kanti , Banerjee Debdulal
Published: May 2023

Agriculture crops that have fungal infections suffer significant economic losses and reduced crop output. Chemical fungicides are used to tackle the problem, although this has additional detrimental side effects. There is an urgent need for safe and novel antifungals. Volatiles from plant-beneficial endophytic fungi are considered promising alternatives for the biological control of fungal pathogens as a sustainable approach in an agroecosystem. In the present investigation, a volatile-emitting sterile endophytic fungus,Diaporthesp. CEL3 with bio-fumigation activity, was isolated from leaves of the ethnomedicinal plantChloranthus elatiorSw., collected from the Passighat forest of North-East India. The camphor odor volatiles of CEL3 showed an inhibitory effect against eight fungal pathogensin vitroand minimized the infections ofMonilinia fructicola, a causal agent of cherry fruit rot, in VOC-exposed cherry fruits.Rhizoctonia solani,Botrytis cinerea,Pythium ultimum, andM.fructicolawere maximally inhibited up to 51.5%, 55.8%, 61.9%, and 78.5%, respectively, in comparison to control by the volatiles. Another isolate, CEL7, identified asCurvulariasp., synthesized non-volatile, soluble antifungal metabolites in its cell-free extracts and exhibited antifungal action. Bioassay-guided fractionation revealed the presence of imidazole compounds- (2-aminoethyl)-1H-imidazole-2-carbaldehyde, Pyrazole 4, 5 imidazole, 1-formyl 3-ethyl, phenol compounds-Phenol, 4-[2-(methylamino) ethyl]-, 6-Nitro-3-chlorophenol, Phenol, 2,4,6-tri-tert-butyl-, etc., in the cell-free extracts, with a MIC value of 250–2,000 µg ml−1. Optimum VOC emission was achieved in a modified PDA medium with instantly smashed potato (150 g L−1), dextrose (20 g L−1), wheat husk (20 g L−1), and yeast extract (20 g L−1), with additional salts. Interestingly, endophytic CEL3 emitted different types of volatiles, and trans-verbenol (32.25%), geraniol (30.32%), trans-ocimenol (12.90%), and mentha-4,8-diene (5.16%) were the prime ones. These VOCs cause lethal leakage of protein and necessary intracellular molecules from the fungal pathogens. Thus, CEL3 could potentially be used as a bio-fumigating agent to control post-harvest infections caused by fungal pathogens. This study opens a new approach to the use of endophytic fungi in biocontrol.
The effects of green space and physical activity on muscle strength: a national cross-sectional survey with 128,759 Chinese adults
Authors: Feng Qiang , Fan Chao-Qun , Wang Jing-Jing , Wang Huan , Wu Dong-Ming , Nassis George P. , Wang Mei , Wang Hai-Jun
Published: May 2023

Background

Muscle strength is closely related to chronic noncommunicable diseases; specifically, a decline in handgrip strength (HS) is predominant globally. Exposure to green space—built environment components used for health intervention—reportedly decreases the risk of certain diseases and all-cause mortality. However, evidence in this area is limited.

Objective

We aimed to explore the association between green space exposure and muscle strength and ascertain the combined effect of physical activity and green space exposure on muscle strength.

Method

Data from 128,759 participants (aged 20–79  years) were obtained using a complex stratified multistage probability cluster sampling design. The green space was assessed as normalized difference vegetation index (NDVI) data for a 500-m buffer zone based on the geolocation information of sampling sites. We used a questionnaire to investigate transportation, occupation, physical activity, leisure-time exercise behaviors, and sedentary time within a usual week of the preceding year. The outcome was low relative HS, defined as HS-to-body weight ratio, and the percentage of men and women with relative HS in the lower third. We defined adequate physical activity as 150  min of moderate-intensity or 75  min of vigorous physical activity per week and calculated the weighted proportion of participants with insufficient physical activity. Categorical variables of NDVI and physical activity were used as exposure variables and their interrelationship was evaluated in a generalized linear mixed model (GLMM) to estimate the odds ratios (ORs) and 95% confidence intervals (95% CI). We measured interaction on an additive or multiplicative scale using a GLMM to test the interaction between green space exposure and physical activity. All analyses were performed for the total sample and subgroups (urban and rural).

Result

The high NDVI group had a lower risk of low relative HS than the low NDVI group (OR [95% CI]: 0.92 [0.88–0.95]). The sufficient physical activity group had a lower risk of low relative HS than the insufficient physical activity group (OR [95% CI]: 0.85 [0.81–0.88]). There was an interactive effect on the additive scale (relative excess risk owing to interaction: 0.29, 95% CI 0.22–0.36, p < 0.001) between green space exposure and physical activity.

Conclusion

High NDVI and adequate physical activity were protective factors against low relative HS in Chinese adults. Increasing green space exposure and physical activity together may have a greater potentiating effect on muscle strength improvement than these two protective factors individually. Green spaces should be incorporated into city design or built environments.
Effects of exercise treatment on functional outcome parameters in mid-portion achilles tendinopathy: a systematic review
Authors: Kim Myoung-Hwee , Lin Chiao-I , Henschke Jakob , Quarmby Andrew , Engel Tilman , Cassel Michael
Published: May 2023

Exercise interventions are evident in the treatment of mid-portion Achilles tendinopathy (AT). However, there is still a lack of knowledge concerning the effect of different exercise treatments on improving a specific function (e.g., strength) in this population. Thus, this study aimed to systematically review the effect of exercise treatments on different functional outcomes in mid-portion AT. An electronic database of Pubmed, Web of Science, and Cochrane Central Register of Controlled Trials were searched from inception to 21 February 2023. Studies that investigated changes in plantar flexor function with exercise treatments were considered in mid-portion AT. Only randomized controlled trials (RCTs) and clinical controlled trials (CCTs) were included. Functional outcomes were classified by kinetic (e.g., strength), kinematic [e.g., ankle range of motion (ROM)], and sensorimotor (e.g., balance index) parameters. The types of exercise treatments were classified into eccentric, concentric, and combined (eccentric plus concentric) training modes. Quality assessment was appraised using the Physiotherapy Evidence Database scale for RCTs, and the Joanna Briggs Institute scale for CCTs. The search yielded 2,260 records, and a total of ten studies were included. Due to the heterogeneity of the included studies, a qualitative synthesis was performed. Eccentric training led to improvements in power outcomes (e.g., height of countermovement jump), and in strength outcomes (e.g., peak torque). Concentric training regimens showed moderate enhanced power outcomes. Moreover, one high-quality study showed an improvement in the balance index by eccentric training, whereas the application of concentric training did not. Combined training modalities did not lead to improvements in strength and power outcomes. Plantarflexion and dorsiflexion ROM measures did not show relevant changes by the exercise treatments. In conclusion, eccentric training is evident in improving strength outcomes in AT patients. Moreover, it shows moderate evidence improvements in power and the sensorimotor parameter “balance index”. Concentric training presents moderate evidence in the power outcomes and can therefore be considered as an alternative to improve this function. Kinematic analysis of plantarflexion and dorsiflexion ROM might not be useful in AT people. This study expands the knowledge what types of exercise regimes should be considered to improve the functional outcomes in AT.
Pollination by native bees achieves high fruit quantity and quality of highbush blueberry: a sustainable alternative to managed pollinators
Authors: Cortés-Rivas Benito , Monzón Víctor Hugo , Rego Juliana Ordones , Mesquita-Neto José Neiva
Published: May 2023

Introduction

Blueberry is one of the most relevant buzz-pollinated crops worldwide, and Chile is the most important global producer of fresh blueberries during wintertime in the Northern Hemisphere. Non-buzzing bees, such as honey bees, may provide suboptimal services compared with bees capable of buzz pollination. The widely held contention that honey bees are inferior pollinators of blueberries drives the industry to place pressure on governments to allow bumblebee (Bombus terrestris) importation for pollination. However, the introduction of B. terrestris generates environmental problems in Chile by competing with and transmitting parasites to local bees. Despite some native Chilean bees being recently recognized as efficient pollen vectors of blueberry crops, no study has evidenced the influence of their visits on fruit yield. Therefore, we aimed to evaluate the native Chilean floral visitors' performance to improve the quantity and quality of highbush blueberry in comparison to the performance of managed visitors.

Methods

Per-visit pollination performance (fruit set and fruit quality) and visitation frequency were measured, and the performance of buzzing behavior by flower visitors was evaluated in four cultivars grown in five blueberry orchards located in southern Chile.

Results

We found that fruit set and weight were highly influenced by floral visitor taxon. Some native bee species can greatly improve the fruit set and fruit quality (greater weight) of the highbush blueberry cultivars. For instance, one single visit of C. occidentalis can increase fruit weight by a factor of 1.8 compared to an A. mellifera visit; however, visits of halictids and syrphids resulted in lower fruit sets than those of unvisited flowers. However, we found that the occurrence of sonication behavior alone was not a predictor of higher fruit set and fruit weight of highbush blueberry cultivars. Consequently, the taxonomic recognition of floral visitors, ideally to the species level, is still needed to distinguish the most efficient fruit yield promoters of blueberry.

Discussion

The conservation of the biotic pollinators, especially native pollinators, would improve blueberry fruit quality and is likely to improve overall crop productivity.
Genomic landscape and gene expression profiles of feline oral squamous cell carcinoma
Authors: Rodney Alana R. , Skidmore Zachary L. , Grenier Jennifer K. , Griffith Obi L. , Miller Andrew D. , Chu Shirley , Ahmed Faraz , Bryan Jeffrey N. , Peralta Santiago , Warren Wesley C.
Published: May 2023

Feline oral squamous cell carcinoma (FOSCC) is a cancer of the squamous cell lining in the oral cavity and represents up to 80% of all oral cancers in cats, with a poor prognosis. We have used whole exome sequencing (WES) and RNA sequencing of the tumor to discover somatic mutations and gene expression changes that may be associated with FOSCC occurrence. FOSCC offers a potential comparative model to study human head and neck squamous cell carcinoma (HNSCC) due to its similar spontaneous formation, and morphological and histological features. In this first study using WES to identify somatic mutations in feline cancer, we have identified tumor-associated gene mutations in six cats with FOSCC and found some overlap with identified recurrently mutated genes observed in HNSCC. Four samples each had mutations in TP53, a common mutation in all cancers, but each was unique. Mutations in other cellular growth control genes were also found such as KAT2B and ARID1A. Enrichment analysis of FOSCC gene expression profiles suggests a molecular similarity to human OSCC as well, including alterations in epithelial to mesenchymal transition and IL6/JAK/STAT pathways. In this preliminary study, we present exome and transcriptome results that further our understanding of FOSCC.
Local, systemic and immunologic safety comparison between xenogeneic equine umbilical cord mesenchymal stem cells, allogeneic canine adipose mesenchymal stem cells and placebo: a randomized controlled trial
Authors: Punzón Eva , García-Castillo María , Rico Miguel A. , Padilla Laura , Pradera Almudena
Published: May 2023

Mesenchymal stem cells are multipotent cells with a wide range of therapeutic applications, including, among others, tissue regeneration. This work aims to test the safety (EUC-MSC) of intra-articular administration of equine umbilical cord mesenchymal stem cells in young healthy dogs under field conditions following single and repeated administration. This was compared with the safety profile of allogenic canine adipose derived mesenchymal stem cells (CAD-MSC) and placebo in order to define the safety of xenogeneic use of mesenchymal stem cells when administered intra-articular. Twenty-four police working dogs were randomized in three groups in a proportion 1:1:1. EUC-MSCs and CAD-MSCs were obtained from healthy donors and were manufactured following company SOPs and under GMP and GMP-like conditions, respectively, and compliant all necessary controls to ensure the quality of the treatment. The safety of the treatment was evaluated locally, systemically and immunologically. For this purpose, an orthopedic examination and Glasgow test for the assessment of pain in the infiltrated joint, blood tests, clinical examination and analysis of the humoral and cellular response to treatment were performed. No adverse events were detected following single and repeated MSC administration despite both equine and canine MSC generate antibody titres in the dogs. The intra-articular administration of equine umbilical cord mesenchymal stem cells in dogs has demonstrated to be safe.
Scaling-Up of the Production of Biochar from Olive Tree Pruning for Agricultural Use: Evaluation of Biochar Characteristics and Phytotoxicity
Authors: Crespo-Barreiro Andrea , Gómez Natalia , González-Arias Judith , Ortiz-Liébana Noemí , González-Andrés Fernando , Cara-Jiménez Jorge
Published: May 2023

Due to the large acreage of olive trees in the Mediterranean basin, the biochar from olive tree pruning may become an important resource as part of circular economy strategies. However, so far, there is not much knowledge on whether the same characteristics are repeated in biochar once production is up-scaled to an industrial level. Accordingly, this study aimed to scale up the production of olive tree pruning biochar with three reactors (semi-pilot, pilot and industrial) to ascertain the production parameters that determine the characteristics of the obtained biochar and its possible toxicity to use in agriculture or environmental applications. First, the production conditions in the semi-pilot reactor were optimised by testing three temperatures (400, 500 and 600 °C), with the result that 600 °C was the optimal production temperature because of a high carbon content (70.88%), moderate pH (8.1), good carbon sink (R50 > 0.5) and low contents of PAHs (<6 mg/kg) and heavy metals, resulting in a phytostimulanting effect for all the crops studied. Then, the production was upscaled, using 600 °C as pyrolysing temperature. At the industrial scale, accurate temperature control is essential because when temperatures above 650 °C were reached, the biochar showed a pH above 11, resulting in severe phytotoxicity. The longer retention time of the material in the industrial pyrolysers improved the carbon stability and, therefore, the biochar’s role as a carbon sink. Consequently, it was proven that it is possible to produce olive tree pruning biochar adequate for agriculture and environmental applications with large-scale equipment, and the two most important factors needing control are the temperature and retention time.
A Survey on Digital Agriculture in Five West African Countries
Authors: Degila Jules , Tognisse Ida Sèmévo , Honfoga Anne-Carole , Houetohossou Sèton Calmette Ariane , Sodedji Fréjus Ariel Kpedetin , Avakoudjo Hospice Gérard Gracias , Tahi Souand Peace Gloria , Assogbadjo Achille Ephrem
Published: May 2023

This study focuses on agriculture, which is the main source of economic growth in many West African countries. In recent years, conventional agriculture has undergone a remarkable evolution and digital technologies are widely used for different purposes. While the world is rapidly using advanced digital technologies to grow their agriculture, Africa seems to be lagging behind, especially West Africa. To know how to contribute effectively, it is important to know what is being performed about this issue. The objective of this study is to examine the state of digital agriculture in five countries, namely, Benin, Burkina Faso, Côte d’Ivoire, Ghana, and Nigeria. The study consisted of an analysis of the scientific contributions of these countries and the cases of actual deployment. This is carried out by means of a bibliometric study based on data collected from the Web of Science and a comparative review of the technologies used in the target countries using data from several sources, such as IEEE, Scopus, Science Direct, Google Scholar, etc. The bibliometric analysis based on 3249 publications revealed that research interests have increased significantly since 2014. Climate change, machine learning (ML), and adoption have been the hottest topics of discussion and most of the organizations working on the topic are academic bodies. Moreover, a considerable amount of the scientific input was obtained from Nigeria, which is the most populous of the five countries considered. The survey on digital farming showed that publications in Nigeria that address deployment cases were focused on the internet of things (IoT), wireless sensor networks, blockchain, and artificial intelligence (AI) technologies. In Ghana, practical cases of blockchain, AI, and big data deployment were observed, while Burkina Faso focused on IoT and AI. In Côte d’Ivoire and Benin, the deployment cases generally focused on AI.
Differences in Faecal Microbiome Taxonomy, Diversity and Functional Potential in a Bovine Cohort Experimentally Challenged with Mycobacterium avium subsp. paratuberculosis (MAP)
Authors: Matthews Chloe , Walsh Aaron M. , Gordon Stephen V. , Markey Bryan , Cotter Paul D. , O' Mahony Jim
Published: May 2023

Mycobacterium avium subspecies paratuberculosis (MAP) is the causative agent of Johne’s disease in ruminants, a chronic enteritis which results in emaciation and eventual loss of the animal. Recent advances in metagenomics have allowed a more in-depth study of complex microbiomes, including that of gastrointestinal tracts, and have the potential to provide insights into consequences of the exposure of an animal to MAP or other pathogens. This study aimed to investigate taxonomic diversity and compositional changes of the faecal microbiome of cattle experimentally challenged with MAP compared to an unexposed control group. Faecal swab samples were collected from a total of 55 animals [exposed group (n = 35) and a control group (n = 20)], across three time points (months 3, 6 and 9 post-inoculation). The composition and functional potential of the faecal microbiota differed across time and between the groups (p < 0.05), with the primary differences, from both a taxonomic and functional perspective, occurring at 3 months post inoculation. These included significant differences in the relative abundance of the genera Methanobrevibacter and Bifidobacterium and also of 11 other species (4 at a higher relative abundance in the exposed group and 7 at a higher relative abundance in the control group). Correlations were made between microbiome data and immunopathology measurements and it was noted that changes in the microbial composition correlated with miRNA-155, miR-146b and IFN-ɣ. In summary, this study illustrates the impact of exposure to MAP on the ruminant faecal microbiome with a number of species that may have relevance in veterinary medicine for tracking exposure to MAP.
Evaluation of Five Host Inflammatory Biomarkers in Early Diagnosis of Ventilator-Associated Pneumonia in Critically Ill Children: A Prospective Single Center Cohort Study
Authors: Sdougka Maria , Simitsopoulou Maria , Volakli Elena , Violaki Asimina , Georgopoulou Vivian , Ftergioti Argiro , Roilides Emmanuel , Iosifidis Elias
Published: May 2023

Background: Early diagnosis of ventilator-associated pneumonia (VAP) remains a challenge due to subjective clinical criteria and the low discriminative power of diagnostic tests. We assessed whether rapid molecular diagnostics in combination with Clinically Pulmonary Index Score (CPIS) scoring, microbiological surveillance and biomarker measurements of PTX-3, SP-D, s-TREM, PTX-3, IL-1β and IL-8 in the blood or lung could improve the accuracy of VAP diagnosis and follow-up in critically ill children. Methods: A prospective pragmatic study in a Pediatric Intensive Care Unit (PICU) was conducted on ventilated critically ill children divided into two groups: high and low suspicion of VAP according to modified Clinically Pulmonary Index Score (mCPIS). Blood and bronchial samples were collected on days 1, 3, 6 and 12 after event onset. Rapid diagnostics were used for pathogen identification and ELISA for PTX-3, SP-D, s-TREM, IL-1β and IL-8 measurements. Results: Among 20 enrolled patients, 12 had a high suspicion (mCPIS > 6), and 8 had a low suspicion of VAP (mCPIS < 6); 65% were male; and 35% had chronic disease. IL-1β levels at day 1 correlated significantly with the number of mechanical ventilation days (rs = 0.67, p < 0.001) and the PICU stay (r = 0.66; p < 0.002). No significant differences were found in the levels of the other biomarkers between the two groups. Mortality was recorded in two patients with high VAP suspicion. Conclusions: PTX-3, SP-D, s-TREM, IL-1β and IL-8 biomarkers could not discriminate patients with a high or low suspicion of VAP diagnosis.