bluuebunny/crossref_metadata_2025 huggingface dataset:
Acute cognitive effects of single-dose intravenous ketamine in major depressive and posttraumatic stress disorder
Authors: Davis Margaret T. , DellaGiogia Nicole , Maruff Paul , Pietrzak Robert H. , Esterlis Irina
Published: April 2021

Intravenous (IV) subanesthetic doses of ketamine have been shown to reduce psychiatric distress in both major depressive (MDD) and posttraumatic stress disorder (PTSD). However, the effect of ketamine on cognitive function in these disorders is not well understood. To address this gap, we examined the effect of a single dose of IV ketamine on cognition in individuals with MDD and/or PTSD relative to healthy controls (HC). Psychiatric (n = 29; 15 PTSD, 14 MDD) and sex- age- and IQ matched HC (n = 29) groups were recruited from the community. A single subanesthetic dose of IV ketamine was administered. Mood and cognitive measures were collected prior to, 2 h and 1 day post-ketamine administration. MDD/PTSD individuals evidenced a large-magnitude improvement in severity of depressive symptoms at both 2-hours and 1 day post-ketamine administration (p’s < .001, Cohen d’s = 0.80–1.02). Controlling for baseline performance and years of education, IV ketamine induced declines in attention (ATTN), executive function (EF), and verbal memory (VM) 2 h post-administration, all of which had resolved by 1 day post-ketamine across groups. The magnitude of cognitive decline was significantly larger in MDD/PTSD relative to HC on attention only (p = .012, d = 0.56). Ketamine did not affect working memory (WM) performance. Cognitive function (baseline, change from baseline to post-ketamine) was not associated with antidepressant response to ketamine. Results suggest that while ketamine may have an acute deleterious effect on some cognitive domains in both MDD/PTSD and HC individuals, most notably attention, this reduction is transient and there is no evidence of ketamine-related cognitive dysfunction at 1 day post-administration.
Subgenual cingulate resting regional cerebral blood flow in premenstrual dysphoric disorder: differential regulation by ovarian steroids and preliminary evidence for an association with expression of ESC/E(Z) complex genes
Authors: Wei Shau-Ming , Baller Erica B. , Martinez Pedro E. , Goff Allison C. , Li Howard J. , Kohn Philip D. , Kippenhan J. Shane , Soldin Steven J. , Rubinow David R. , Goldman David , Schmidt Peter J. , Berman Karen F.
Published: April 2021

Substantial evidence suggests that circulating ovarian steroids modulate behavior differently in women with PMDD than in those without this condition. However, hormonal state-related abnormalities of neural functioning in PMDD remain to be better characterized. In addition, while altered neural function in PMDD likely co-exists with alterations in intrinsic cellular function, such a relationship has not been explored. Here, we investigated the effects of ovarian steroids on basal, resting regional cerebral blood flow (rCBF) in PMDD, and, in an exploratory analysis, we tested whether the rCBF findings were linked to the expression of ESC/E(Z) genes, which form an essential ovarian steroid-regulated gene-silencing complex. Resting rCBF was measured with oxygen-15 water PET (189 PET sessions in 43 healthy women and 20 women with PMDD) during three self-as-own-control conditions: GnRH agonist (Lupron)-induced ovarian suppression, estradiol add-back, and progesterone add-back. ESC/E(Z) gene expression data were obtained from RNA-sequencing of lymphoblastoid cell lines performed in a previous study and were examined in relation to hormone-induced changes in rCBF. In the rCBF PET data, there was a significant diagnosis-by-hormone interaction in the subgenual cingulate (PFDR = 0.05), an important neuroanatomical hub for regulating affective state. Whereas control women showed no hormonally-related changes in resting rCBF, those with PMDD showed decreased resting rCBF during both estradiol (P = 0.02) and progesterone (P = 0.0002) add-back conditions. In addition, in PMDD, ESC/E(Z) gene expression correlated with the change in resting rCBF between Lupron-alone and progesterone conditions (Pearson r = −0.807, P = 0.016). This work offers a formulation of PMDD that integrates behavioral, neural circuit, and cellular mechanisms, and may provide new targets for future therapeutic interventions.
Smc5/6 functions with Sgs1-Top3-Rmi1 to complete chromosome replication at natural pause sites
Authors: Agashe Sumedha , Joseph Chinnu Rose , Reyes Teresa Anne Clarisse , Menolfi Demis , Giannattasio Michele , Waizenegger Anja , Szakal Barnabas , Branzei Dana
Published: April 2021

Smc5/6 is essential for genome structural integrity by yet unknown mechanisms. Here we find that Smc5/6 co-localizes with the DNA crossed-strand processing complex Sgs1-Top3-Rmi1 (STR) at genomic regions known as natural pausing sites (NPSs) where it facilitates Top3 retention. Individual depletions of STR subunits and Smc5/6 cause similar accumulation of joint molecules (JMs) composed of reversed forks, double Holliday Junctions and hemicatenanes, indicative of Smc5/6 regulating Sgs1 and Top3 DNA processing activities. We isolate an intra-allelic suppressor of smc6-56 proficient in Top3 retention but affected in pathways that act complementarily with Sgs1 and Top3 to resolve JMs arising at replication termination. Upon replication stress, the smc6-56 suppressor requires STR and Mus81-Mms4 functions for recovery, but not Srs2 and Mph1 helicases that prevent maturation of recombination intermediates. Thus, Smc5/6 functions jointly with Top3 and STR to mediate replication completion and influences the function of other DNA crossed-strand processing enzymes at NPSs.
Author Correction: Viral Bcl2s’ transmembrane domain interact with host Bcl2 proteins to control cellular apoptosis
Authors: García-Murria Maria Jesús , Duart Gerard , Grau Brayan , Diaz-Beneitez Elisabet , Rodríguez Dolores , Mingarro Ismael , Martínez-Gil Luis
Published: April 2021

A Correction to this paper has been published: https://doi.org/10.1038/s41467-021-22797-7
Online adaptive quantum characterization of a nuclear spin
Authors: Joas Timo , Schmitt Simon , Santagati Raffaele , Gentile Antonio Andrea , Bonato Cristian , Laing Anthony , McGuinness Liam P. , Jelezko Fedor
Published: April 2021

The characterization of quantum systems is both a theoretical and technical challenge. Theoretical because of the exponentially increasing complexity with system size and the fragility of quantum states under observation. Technical because of the requirement to manipulate and read out individual atomic or photonic elements. Adaptive methods can help to overcome these challenges by optimizing the amount of information each measurement provides and reducing the necessary resources. Their implementation, however, requires fast-feedback and complex processing algorithms. Here, we implement online adaptive sensing with single spins and demonstrate close to photon shot noise limited performance with high repetition rate, including experimental overheads. We further use fast feedback to determine the hyperfine coupling of a nuclear spin to the nitrogen-vacancy sensor with a sensitivity of$$445\,{\mathrm{nT}}{\sqrt{\mathrm{Hz}}}^{- 1}$$445nTHz−1. Our experiment is a proof of concept that online adaptive techniques can be a versatile tool to enable faster characterization of the spin environment.
Gigahertz measurement-device-independent quantum key distribution using directly modulated lasers
Authors: Woodward R. I. , Lo Y. S. , Pittaluga M. , Minder M. , Paraïso T. K. , Lucamarini M. , Yuan Z. L. , Shields A. J.
Published: April 2021

Measurement-device-independent quantum key distribution (MDI-QKD) is a technique for quantum-secured communication that eliminates all detector side-channels, although is currently limited by implementation complexity and low secure key rates. Here, we introduce a simple and compact MDI-QKD system design at gigahertz clock rates with enhanced resilience to laser fluctuations—thus enabling free-running semiconductor laser sources to be employed without spectral or phase feedback. This is achieved using direct laser modulation, carefully exploiting gain-switching and injection-locking laser dynamics to encode phase-modulated time-bin bits. Our design enables secure key rates that improve upon the state of the art by an order of magnitude, up to 8 bps at 54 dB channel loss and 2 kbps in the finite-size regime for 30 dB channel loss. This greatly simplified MDI-QKD system design and proof-of-principle demonstration shows that MDI-QKD is a practical, high-performance solution for future quantum communication networks.
A low-cost, high-efficiency, new generation material for fog harvesting fumed silica-doped polypropylene
Authors: Kari̇per İ. Afşin
Published: April 2021

This study describes the development of a fog collector material for fog harvesting. Polypropylene (PP) doped with fumed silica (0–2%) was punctured at equal intervals and exposed to fog produced by a humidifier. The amount of water harvested by each sample was measured using an ultrasonic fogger. Polypropylene doped with 1% fumed silica was most effective at harvesting water, and collected almost 19–20 times more water than pure polypropylene. This improvement is due to the surface tension, which decreased from 16.754 mN/m (pure PP) to 13.512 and 9.992 mN/m (0.5% and 1% fumed silica, respectively). On the other hand, when fumed silica doping exceeded 1%, this increased the polymer’s surface tension, measured as 20.6 and 38.1 mN/m for 1.5 and 2% fumed silica doping. We therefore propose fog harvesting using 1% fumed silica-doped polypropylene as a low-cost method for collecting clean water in arid regions.
Single-pixel imaging of dynamic objects using multi-frame motion estimation
Authors: Monin Sagi , Hahamovich Evgeny , Rosenthal Amir
Published: April 2021

Single-pixel imaging (SPI) enables the visualization of objects with a single detector by using a sequence of spatially modulated illumination patterns. For natural images, the number of illumination patterns may be smaller than the number of pixels when compressed-sensing algorithms are used. Nonetheless, the sequential nature of the SPI measurement requires that the object remains static until the signals from all the required patterns have been collected. In this paper, we present a new approach to SPI that enables imaging scenarios in which the imaged object, or parts thereof, moves within the imaging plane during data acquisition. Our algorithms estimate the motion direction from inter-frame cross-correlations and incorporate it in the reconstruction model. Moreover, when the illumination pattern is cyclic, the motion may be estimated directly from the raw data, further increasing the numerical efficiency of the algorithm. A demonstration of our approach is presented for both numerically simulated and measured data.
Adverse body measurements are superior to sarcopenia-associated measurements in predicting chronic diseases
Authors: Liao Pei-Ju , Lin Yu-Ching , Ting Ming-Kuo , Wu I.-W.en , Chen Shuo-Wei , Yang Ning-I. , Hsu Kuang-Hung
Published: April 2021

Few studies have demonstrated an association of sarcopenia-associated body measurements with chronic diseases through a comprehensive methodology. This study aims to examine the relationship between sarcopenia-associated body measurements and chronic diseases. This is a cohort study. We recruited 316 community dwellers, including 76 patients with sarcopenia and 240 controls, and obtained their body measurements associated with sarcopenia. We collected three-dimensional anthropometric body-surface measurements from 11,158 participants during 2000–2008 and followed up this cohort for 15 years to examine the association of these measurements with the risk of chronic diseases such as hypertension, type 2 diabetes mellitus (T2DM), heart disease, and nephrotic syndrome. Univariate analysis, canonical correlation, and Cox regression analysis were performed to explore the associations. Decreased waist width, upper left arm circumference, and left thigh circumference were significantly associated with sarcopenia. The adverse body measure score (ABMS) was derived by combining significant measurements, namely left upper arm circumference, waist width, and left thigh circumference, and used to predict the risk of hypertension, T2DM, heart diseases, and nephrotic syndrome. A positive association was observed between the ABMS and chronic diseases. Considering the first quartile of the ABMS as a reference, we determined hazard ratios of 2.259, 2.495, 1.332, and 1.595 for hypertension, T2DM, heart disease, and nephrotic syndrome, respectively, in the fourth quartile. Chronic diseases were more strongly associated with the ABMS than with sarcopenia-related body measurements alone. A high ABMS, which includes higher upper arm circumference, higher waist width, and lower thigh circumference, can significantly predict chronic diseases.
Scattering-lens based quantum imaging beyond shot noise
Authors: Li Dong , Yao Yao
Published: April 2021

The scheme of optical imaging using scattering lens can provide a resolution beyond the classical optical diffraction limit with a coherent-state input. Nevertheless, due to the shot noise of the coherent state, the corresponding signal-to-noise ratio and resolution are both still shot-noise-limited. In order to circumvent this problem, we theoretically propose an alternative scheme where the squeezed state (with a sub-shot noise) is considered as input and the quantum noise is then suppressed below the shot-noise level. Consequently, when comparing with the previous imaging scheme (using combination of coherent state and scattering lens), our proposal is able to achieve an enhanced signal-to-noise ratio for a given scattering lens. Meanwhile, it is demonstrated that the resolution is also improved. We believe that this method may afford a new way of using squeezed states and enable a higher performance than that of using coherent state and scattering lens.
Self-sampling of capillary blood for SARS-CoV-2 serology
Authors: Brown Lottie , Byrne Rachel L. , Fraser Alice , Owen Sophie I. , Cubas-Atienzar Ana I. , Williams Christopher T. , Kay Grant A. , Cuevas Luis E. , Fitchett Joseph R. A. , Fletcher Tom , Garrod Gala , Kontogianni Konstantina , Krishna Sanjeev , Menzies Stefanie , Planche Tim , Sainter Chris , Staines Henry M. , Turtle Lance , Adams Emily R.
Published: April 2021

Serological testing is emerging as a powerful tool to progress our understanding of COVID-19 exposure, transmission and immune response. Large-scale testing is limited by the need for in-person blood collection by staff trained in venepuncture, and the limited sensitivity of lateral flow tests. Capillary blood self-sampling and postage to laboratories for analysis could provide a reliable alternative. Two-hundred and nine matched venous and capillary blood samples were obtained from thirty nine participants and analysed using a COVID-19 IgG ELISA to detect antibodies against SARS-CoV-2. Thirty eight out of thirty nine participants were able to self-collect an adequate sample of capillary blood (≥ 50 µl). Using plasma from venous blood collected in lithium heparin as the reference standard, matched capillary blood samples, collected in lithium heparin-treated tubes and on filter paper as dried blood spots, achieved a Cohen’s kappa coefficient of > 0.88 (near-perfect agreement, 95% CI 0.738–1.000). Storage of capillary blood at room temperature for up to 7 days post sampling did not affect concordance. Our results indicate that capillary blood self-sampling is a reliable and feasible alternative to venepuncture for serological assessment in COVID-19.
New vectors that are early feeders for Plasmodium knowlesi and other simian malaria parasites in Sarawak, Malaysian Borneo
Authors: De Ang Joshua Xin , Yaman Khatijah , Kadir Khamisah Abdul , Matusop Asmad , Singh Balbir
Published: April 2021

Plasmodium knowlesi is the main cause of malaria in Sarawak, where studies on vectors of P. knowlesi have been conducted in only two districts. Anopheles balabacensis and An. donaldi were incriminated as vectors in Lawas and An. latens in Kapit. We studied a third location in Sarawak, Betong, where of 2169 mosquitoes collected over 36 days using human-landing catches, 169 (7.8%) were Anopheles spp. PCR and phylogenetic analyses identified P. knowlesi and/or P. cynomolgi, P. fieldi, P. inui, P. coatneyi and possibly novel Plasmodium spp. in salivary glands of An. latens and An. introlatus from the Leucosphyrus Group and in An. collessi and An. roperi from the Umbrosus Group. Phylogenetic analyses of cytochrome oxidase subunit I sequences indicated three P. knowlesi-positive An. introlatus had been misidentified morphologically as An. latens, while An. collessi and An. roperi could not be delineated using the region sequenced. Almost all vectors from the Leucosphyrus Group were biting after 1800 h but those belonging to the Umbrosus Group were also biting between 0700 and 1100 h. Our study incriminated new vectors of knowlesi malaria in Sarawak and underscores the importance of including entomological studies during the daytime to obtain a comprehensive understanding of the transmission dynamics of malaria.
Effects of sediment replenishment on riverbed environments and macroinvertebrate assemblages downstream of a dam
Authors: Katano Izumi , Negishi Junjiro N. , Minagawa Tomoko , Doi Hideyuki , Kawaguchi Yôichi , Kayaba Yuichi
Published: April 2021

Riverbeds downstream of dams are starved of sediment, impacting habitat structure and ecological function. Despite the implementation of sediment management techniques, there has been no evaluation of their conservational effectiveness; the impacts on high trophic level organisms remain unknown. This study examined the effects of sediment replenishment on riverbeds and macroinvertebrates in a dammed river before and after sediment replenishment. We evaluated the particle sizes of replenished sediments and the case material of a case-bearing caddisfly. We observed significant changes in macroinvertebrate assemblages before and after sediment replenishment, and between the upstream and tributary references and downstream of the dam. The percentages of Ephemeroptera, Plecoptera, and Trichoptera, and the number of inorganic case-bearing caddisflies downstream of the dam following sediment replenishment, were significantly higher than the upstream and tributary reference sites. The particle size of case materials used by case-bearing caddisfly corresponded to the size of the replenished sediment. Dissimilarity results after replenishment showed that assemblages downstream of the dam differed from upstream sites, although they were similar to the tributary sites. The dissimilarity between the tributary and downstream of the dam was the same as that between the upstream and tributary. Sediment replenishment was observed to reduce the harmful effects of the dam, and partly restore benefits such as increasing species diversity and altering community assemblages, similar to the effects of tributary inflows.
ZnO nucleation into trititanate nanotubes by ALD equipment techniques, a new way to functionalize layered metal oxides
Authors: Moreno Mabel , Arredondo Miryam , Ramasse Quentin M. , McLaren Matthew , Stötzner Philine , Förster Stefan , Benavente Eglantina , Salgado Caterina , Devis Sindy , Solar Paula , Velasquez Luis , González Guillermo
Published: April 2021

In this contribution, we explore the potential of atomic layer deposition (ALD) techniques for developing new semiconductor metal oxide composites. Specifically, we investigate the functionalization of multi-wall trititanate nanotubes, H2Ti3O7 NTs (sample T1) with zinc oxide employing two different ALD approaches: vapor phase metalation (VPM) using diethylzinc (Zn(C2H5)2, DEZ) as a unique ALD precursor, and multiple pulsed vapor phase infiltration (MPI) using DEZ and water as precursors. We obtained two different types of tubular H2Ti3O7 species containing ZnO in their structures. Multi-wall trititanate nanotubes with ZnO intercalated inside the tube wall sheets were the main products from the VPM infiltration (sample T2). On the other hand, MPI (sample T3) principally leads to single-wall nanotubes with a ZnO hierarchical bi-modal functionalization, thin film coating, and surface decorated with ZnO particles. The products were mainly characterized by electron microscopy, energy dispersive X-ray, powder X-ray diffraction, Fourier transform infrared spectroscopy, and X-ray photoelectron spectroscopy. An initial evaluation of the optical characteristics of the products demonstrated that they behaved as semiconductors. The IR study revealed the role of water, endogenous and/or exogenous, in determining the structure and properties of the products. The results confirm that ALD is a versatile tool, promising for developing tailor-made semiconductor materials.
Phenotypic plasticity explains apparent reverse evolution of fat synthesis in parasitic wasps
Authors: Visser Bertanne , Alborn Hans T. , Rondeaux Suzon , Haillot Manon , Hance Thierry , Rebar Darren , Riederer Jana M. , Tiso Stefano , van Eldijk Timo J. B. , Weissing Franz J. , Nieberding Caroline M.
Published: April 2021

Numerous cases of evolutionary trait loss and regain have been reported over the years. Here, we argue that such reverse evolution can also become apparent when trait expression is plastic in response to the environment. We tested this idea for the loss and regain of fat synthesis in parasitic wasps. We first show experimentally that the waspLeptopilina heterotomaswitches lipogenesis on in a fat-poor environment, and completely off in a fat-rich environment. Plasticity suggests that this species did not regain fat synthesis, but that it can be switched off in some environmental settings. We then compared DNA sequence variation and protein domains of several more distantly related parasitoid species thought to have lost lipogenesis, and found no evidence for non-functionality of key lipogenesis genes. This suggests that other parasitoids may also show plasticity of fat synthesis. Last, we used individual-based simulations to show that a switch for plastic expression can remain functional in the genome for thousands of generations, even if it is only used sporadically. The evolution of plasticity could thus also explain other examples of apparent reverse evolution.
Primary aldosteronism is associated with risk of urinary bladder stones in a nationwide cohort study
Authors: Chung Mu-Chi , Lin Cheng-Li , Wu Ming-Ju , Chen Cheng-Hsu , Shieh Jeng-Jer , Chung Chi-Jung , Li Chi-Yuan , Yu Tung-Min
Published: April 2021

We analyzed database from the Taiwan National Health Insurance to investigate whether primary aldosteronism (PA) increases the risk of bladder stones. This retrospective nationwide population-based cohort study during the period of 1998–2011 compared patients with and without PA extracted by propensity score matching. Cox proportional hazard models and competing death risk model were used to estimate the hazard ratios (HRs), sub-hazard ratios (SHRs) and corresponding 95% confidence intervals (CIs). There were 3442 patients with PA and 3442 patients without PA. The incidence rate of bladder stones was 5.36 and 3.76 per 1000 person-years for both groups, respectively. In adjusted Cox hazard proportional regression models, the HR of bladder stones was 1.68 (95% CI 1.20–2.34) for patients with PA compared to individuals without PA. Considering the competing risk of death, the SHR of bladder stones still indicates a higher risk for PA than a comparison cohort (SHR, 1.79; 95% CI 1.30–2.44). PA, age, sex, and fracture number were the variables significantly contributing to the formation of bladder stones. In conclusion, PA is significantly associated with risk of bladder stones.
Grain-boundary segregation of magnesium in doped cuprous oxide and impact on electrical transport properties
Authors: Resende João , Nguyen Van-Son , Fleischmann Claudia , Bottiglieri Lorenzo , Brochen Stéphane , Vandervorst Wilfried , Favre Wilfried , Jiménez Carmen , Deschanvres Jean-Luc , Nguyen Ngoc Duy
Published: April 2021

In this study, we report the segregation of magnesium in the grain boundaries of magnesium-doped cuprous oxide (Cu2O:Mg) thin films as revealed by atom probe tomography and the consequences of the dopant presence on the temperature-dependent Hall effect properties. The incorporation of magnesium as a divalent cation was achieved by aerosol-assisted metal organic chemical vapour deposition, followed by thermal treatments under oxidizing conditions. We observe that, in comparison with intrinsic cuprous oxide, the electronic transport is improved in Cu2O:Mg with a reduction of resistivity to 13.3 ± 0.1 Ω cm, despite the reduction of hole mobility in the doped films, due to higher grain-boundary scattering. The Hall carrier concentration dependence with temperature showed the presence of an acceptor level associated with an ionization energy of 125 ± 9 meV, similar to the energy value of a large size impurity−vacancy complex. Atom probe tomography shows a magnesium incorporation of 5%, which is substantially present at the grain boundaries of the Cu2O.
An anomaly detection approach to identify chronic brain infarcts on MRI
Authors: van Hespen Kees M. , Zwanenburg Jaco J. M. , Dankbaar Jan W. , Geerlings Mirjam I. , Hendrikse Jeroen , Kuijf Hugo J.
Published: April 2021

The performance of current machine learning methods to detect heterogeneous pathology is limited by the quantity and quality of pathology in medical images. A possible solution is anomaly detection; an approach that can detect all abnormalities by learning how ‘normal’ tissue looks like. In this work, we propose an anomaly detection method using a neural network architecture for the detection of chronic brain infarcts on brain MR images. The neural network was trained to learn the visual appearance of normal appearing brains of 697 patients. We evaluated its performance on the detection of chronic brain infarcts in 225 patients, which were previously labeled. Our proposed method detected 374 chronic brain infarcts (68% of the total amount of brain infarcts) which represented 97.5% of the total infarct volume. Additionally, 26 new brain infarcts were identified that were originally missed by the radiologist during radiological reading. Our proposed method also detected white matter hyperintensities, anomalous calcifications, and imaging artefacts. This work shows that anomaly detection is a powerful approach for the detection of multiple brain abnormalities, and can potentially be used to improve the radiological workflow efficiency by guiding radiologists to brain anomalies which otherwise remain unnoticed.
Estimation of the molecular weight of nanoparticles using a single small-angle X-ray scattering measurement on a relative scale
Authors: Zhigunov Alexander , Pleštil Josef
Published: April 2021

Both small-angle scattering methods, X-rays (SAXS) and neutrons (SANS) rank among the methods that facilitate the determination of the molar mass of nanoparticles. Using this measure, aggregation or degradation processes are easy to follow. Mono- and multichain assemblies of nanoparticles in solution could be resolved, swelling ratio can also be obtained. In this work, we present a method that allows extraction of additional information, including molecular weight, from a single scattering curve, even on a relative scale. The underlying theory and step-by-step procedure are described.
Environmental variables influence the developmental stages of the citrus leafminer, infestation level and mined leaves physiological response of Kinnow mandarin
Authors: Nawaz Rab , Abbasi Nadeem Akhtar , Hafiz Ishfaq Ahmad , Khan Muhammad Faisal , Khalid Azeem
Published: April 2021

Climate change has not only exacerbated abiotic stress, but has also rendered external conditions more feasible for pests to spread and infest citrus fruit. Citrus leafminer (Phyllocnistis citrella) is a potential pest that directly feeds the newly sprouted leaves and twigs of all three spring, summer and autumn flushes. Increasing temperatures in spring and autumn, leafminer accrued more heat units or developmental degree days to accelerate the biological stages of its life-cycle, thereby increasing the pressure of infestation. Present work was conducted at three different environmental conditions in Sargodha, Toba Tek Singh (TTS) and Vehari districts of the Punjab province, Pakistan; all three experimental sites were located in different agro-ecological zones. More infestation was recorded in all three flushes at TTS and Vehari than in Sargodha. Overall, more damage was observed due to higher temperatures in TTS and Vehari than in Sargodha. After May–June heat stress, spontaneous vegetative growth continued from July to November, produced newly spouted tender leaves for feeding the leafminer larvae, and was seen more in TTS and Vehari. Leafminer larva prefers to enter young and tender leaves with a maximum entrance in leaves up to 1 cm2 in size while observing no entrance above 3 cm2 of leaf size. Physiological response of leaves primarily attributed to chlorophyll and carotenoid contents, both of which were recorded lower in the mined leaves, thereby reducing leaf photosynthetic activity. Similarly, lower levels of polyphenols and antioxidant activity were also recorded in the mined leaves. The on-tree age of mined leaves of three vegetative flushes of Kinnow plant was also less counted than non-mined leaves. Climate change has affected vegetative phenology and become feasible for pests due to extemporaneous leaf growth, particularly leafminer, and eventually causes economic loss by supplying low carbohydrates either to hanging fruits or next-season crops.
A digital nervous system aiming toward personalized IoT healthcare
Authors: Armgarth Astrid , Pantzare Sandra , Arven Patrik , Lassnig Roman , Jinno Hiroaki , Gabrielsson Erik O. , Kifle Yonatan , Cherian Dennis , Arbring Sjöström Theresia , Berthou Gautier , Dowling Jim , Someya Takao , Wikner J. Jacob , Gustafsson Göran , Simon Daniel T. , Berggren Magnus
Published: April 2021

Body area networks (BANs), cloud computing, and machine learning are platforms that can potentially enable advanced healthcare outside the hospital. By applying distributed sensors and drug delivery devices on/in our body and connecting to such communication and decision-making technology, a system for remote diagnostics and therapy is achieved with additional autoregulation capabilities. Challenges with such autarchic on-body healthcare schemes relate to integrity and safety, and interfacing and transduction of electronic signals into biochemical signals, and vice versa. Here, we report a BAN, comprising flexible on-body organic bioelectronic sensors and actuators utilizing two parallel pathways for communication and decision-making. Data, recorded from strain sensors detecting body motion, are both securely transferred to the cloud for machine learning and improved decision-making, and sent through the body using a secure body-coupled communication protocol to auto-actuate delivery of neurotransmitters, all within seconds. We conclude that both highly stable and accurate sensing—from multiple sensors—are needed to enable robust decision making and limit the frequency of retraining. The holistic platform resembles the self-regulatory properties of the nervous system, i.e., the ability to sense, communicate, decide, and react accordingly, thus operating as a digital nervous system.
Altered patterns of fractional amplitude of low-frequency fluctuation and regional homogeneity in abstinent methamphetamine-dependent users
Authors: Xie An , Wu Qiuxia , Yang Winson Fu Zun , Qi Chang , Liao Yanhui , Wang Xuyi , Hao Wei , Tang Yi-Yuan , Liu Jianbin , Liu Tieqiao , Tang Jinsong
Published: April 2021

Methamphetamine (MA) could induce functional and structural brain alterations in dependent subjects. However, few studies have investigated resting-state activity in methamphetamine-dependent subjects (MADs). We aimed to investigate alterations of brain activity during resting-state in MADs using fractional amplitude of low-frequency fluctuation (fALFF) and regional homogeneity (ReHo). We analyzed fALFF and ReHo between MADs (n = 70) and healthy controls (HCs) (n = 84) and performed regression analysis using MA use variables. Compared to HCs, abstinent MADs showed increased fALFF and ReHo values in the bilateral striatum, decreased fALFF in the left inferior frontal gyrus, and decreased ReHo in the bilateral anterior cingulate cortex, sensorimotor cortex, and left precuneus. We also observed the fALFF values of bilateral striatum were positively correlated with the age of first MA use, and negatively correlated with the duration of MA use. The fALFF value of right striatum was also positively correlated with the duration of abstinence. The alterations of spontaneous cerebral activity in abstinent MADs may help us probe into the neurological pathophysiology underlying MA-related dysfunction and recovery. Since MADs with higher fALFF in the right striatum had shorter MA use and longer abstinence, the increased fALFF in the right striatum might implicate early recovery during abstinence.
Tailoring bismuth borate glasses by incorporating PbO/GeO2 for protection against nuclear radiation
Authors: Kumar Ashok , Jain Anisha , Sayyed M. I. , Laariedh Farah , Mahmoud K. A. , Nebhen Jamel , Khandaker Mayeen Uddin , Faruque M. R. I.
Published: April 2021

Nuclear radiation shielding capabilities for a glass series 20Bi2O3 − xPbO − (80 − 2x)B2O3 − xGeO2 (where x = 5, 10, 20, and 30 mol%) have been investigated using the Phy-X/PSD software and Monte Carlo N-Particle transport code. The mass attenuation coefficients (μm) of selected samples have been estimated through XCOM dependent Phy-X/PSD program and MCNP-5 code in the photon-energy range 0.015–15 MeV. So obtained μm values are used to calculate other γ-ray shielding parameters such as half-value layer (HVL), mean-free-path (MFP), etc. The calculated μm values were found to be 71.20 cm2/g, 76.03 cm2/g, 84.24 cm2/g, and 90.94 cm2/g for four glasses S1 to S4, respectively. The effective atomic number (Zeff)values vary between 69.87 and 17.11 for S1 or 75.66 and 29.11 for S4 over 0.05–15 MeV of photon-energy. Sample S4, which has a larger PbO/GeO2 of 30 mol% in the bismuth-borate glass, possesses the lowest MFP and HVL, providing higher radiation protection efficiency compared to all other combinations. It shows outperformance while compared the calculated parameters (HVL and MFP) with the commercial shielding glasses, different alloys, polymers, standard shielding concretes, and ceramics. Geometric Progression (G-P) was applied for evaluating the energy absorption and exposure buildup factors at energies 0.015–15 MeV with penetration depths up to 40 mfp. The buildup factors showed dependence on the MFP and photon-energy as well. The studied samples' neutron shielding behavior was also evaluated by calculating the fast neutron removal cross-section (ΣR), i.e. found to be 0.139 cm−1 for S1, 0.133 cm−1 for S2, 0.128 cm−1 for S3, and 0.12 cm−1 for S4. The results reveal a great potential for using a glass composite sample S4 in radiation protection applications.
Excitonic effects in the optical spectra of Li2SiO3 compound
Authors: Han Nguyen Thi , Dien Vo Khuong , Lin Ming-Fa
Published: April 2021

Li2SiO3 compound exhibits unique electronic and optical properties. The state-of-the-art analyses, which based on first-principle calculations, have successfully confirmed the concise physical/chemical picture and the orbital bonding in Li–O and Si–O bonds. Especially, the unusual optical response behavior includes a large red shift of the onset frequency due to the extremely strong excitonic effect, the polarization of optical properties along three-directions, various optical excitations structures and the most prominent plasmon mode in terms of the dielectric functions, energy loss functions, absorption coefficients and reflectance spectra. The close connections of electronic and optical properties can identify a specific orbital hybridization for each distinct excitation channel. The presented theoretical framework will be fully comprehending the diverse phenomena and widen the potential application of other emerging materials.
Prediction of Streptococcus uberis clinical mastitis treatment success in dairy herds by means of mass spectrometry and machine-learning
Authors: Maciel-Guerra Alexandre , Esener Necati , Giebel Katharina , Lea Daniel , Green Martin J. , Bradley Andrew J. , Dottorini Tania
Published: April 2021

Streptococcus uberisis one of the leading pathogens causing mastitis worldwide. Identification ofS. uberisstrains that fail to respond to treatment with antibiotics is essential for better decision making and treatment selection. We demonstrate that the combination of supervised machine learning and matrix-assisted laser desorption ionization/time of flight (MALDI-TOF) mass spectrometry can discriminate strains ofS. uberiscausing clinical mastitis that are likely to be responsive or unresponsive to treatment. Diagnostics prediction systems trained on 90 individuals from 26 different farms achieved up to 86.2% and 71.5% in terms of accuracy and Cohen’s kappa. The performance was further increased by adding metadata (parity, somatic cell count of previous lactation and count of positive mastitis cases) to encoded MALDI-TOF spectra, which increased accuracy and Cohen’s kappa to 92.2% and 84.1% respectively. A computational framework integrating protein–protein networks and structural protein information to the machine learning results unveiled the molecular determinants underlying the responsive and unresponsive phenotypes.
Optical characteristics of type-II hexagonal-shaped GaSb quantum dots on GaAs synthesized using nanowire self-growth mechanism from Ga metal droplet
Authors: Baik Min , Kyhm Ji-hoon , Kang Hang-Kyu , Jeong Kwang-Sik , Kim Jong Su , Cho Mann-Ho , Song Jin Dong
Published: April 2021

We report the growth mechanism and optical characteristics of type-II band-aligned GaSb quantum dots (QDs) grown on GaAs using a droplet epitaxy-driven nanowire formation mechanism with molecular beam epitaxy. Using transmission electron microscopy and scanning electron microscopy images, we confirmed that the QDs, which comprised zinc-blende crystal structures with hexagonal shapes, were successfully grown through the formation of a nanowire from a Ga droplet, with reduced strain between GaAs and GaSb. Photoluminescence (PL) peaks of GaSb capped by a GaAs layer were observed at 1.11 eV, 1.26 eV, and 1.47 eV, assigned to the QDs, a wetting-like layer (WLL), and bulk GaAs, respectively, at the measurement temperature of 14 K and excitation laser power of 30 mW. The integrated PL intensity of the QDs was significantly stronger than that of the WLL, which indicated well-grown GaSb QDs on GaAs and the generation of an interlayer exciton, as shown in the power- and temperature-dependent PL spectra, respectively. In addition, time-resolved PL data showed that the GaSb QD and GaAs layers formed a self-aligned type-II band alignment; the temperature-dependent PL data exhibited a high equivalent internal quantum efficiency of 15 ± 0.2%.
Adolescent fluoxetine treatment mediates a persistent anxiety-like outcome in female C57BL/6 mice that is ameliorated by fluoxetine re-exposure in adulthood
Authors: Flores-Ramirez Francisco J. , Themann Anapaula , Sierra-Fonseca Jorge A. , Garcia-Carachure Israel , Castillo Samuel A. , Rodriguez Minerva , Lira Omar , Preciado-Piña Joshua , Warren Brandon L. , Robison Alfred J. , Iñiguez Sergio D.
Published: April 2021

The objective of this study was to evaluate whether juvenile fluoxetine (FLX) exposure induces long-term changes in baseline responses to anxiety-inducing environments, and if so, whether its re-exposure in adulthood would ameliorate this anxiety-like phenotype. An additional goal was to assess the impact of adolescent FLX pretreatment, and its re-exposure in adulthood, on serotonin transporters (5-HTT) and brain-derived-neurotrophic-factor (BDNF)-related signaling markers (TrkB-ERK1/2-CREB-proBDNF-mBDNF) within the hippocampus and prefrontal cortex. To do this, female C57BL/6 mice were exposed to FLX in drinking water during postnatal-days (PD) 35–49. After a 21-day washout-period (PD70), mice were either euthanized (tissue collection) or evaluated on anxiety-related tests (open field, light/dark box, elevated plus-maze). Juvenile FLX history resulted in a persistent avoidance-like profile, along with decreases in BDNF-signaling markers, but not 5-HTTs or TrkB receptors, within both brain regions. Interestingly, FLX re-exposure in adulthood reversed the enduring FLX-induced anxiety-related responses across all behavioral tasks, while restoring ERK2-CREB-proBDNF markers to control levels and increasing mBDNF within the prefrontal cortex, but not the hippocampus. Collectively, these results indicate that adolescent FLX history mediates neurobehavioral adaptations that endure into adulthood, which are indicative of a generalized anxiety-like phenotype, and that this persistent effect is ameliorated by later-life FLX re-exposure, in a prefrontal cortex-specific manner.
The requirement of glycoprotein C (gC) for interindividual spread is a conserved function of gC for avian herpesviruses
Authors: Vega-Rodriguez Widaliz , Xu Huai , Ponnuraj Nagendraprabhu , Akbar Haji , Kim Taejoong , Jarosinski Keith William
Published: April 2021

We have formerly shown that glycoprotein C (gC) ofGallid alphaherpesvirus2, better known as Marek’s disease (MD) alphaherpesvirus (MDV), is required for interindividual spread in chickens. Since gC is conserved within theAlphaherpesvirinaesubfamily, we hypothesized gC was important for interindividual spread of other alphaherpesviruses. To test this hypothesis, we first generated a fluorescent protein tagged clone ofGallid alphaherpesvirus3 MD vaccine strain 301B/1 to track virus replication in cell culture and chickens using fluorescent microscopy. Following validation of this system, we removed the open reading frame of 301B/1 gC from the genome and determined whether it was required for interindividual spread using experimental and natural infection studies. Interindividual spread of MD vaccine 301B/1 was abrogated by removal of 301B/1 gC. Rescuent virus in which 301B/1 gC was inserted back into the genome efficiently spread among chickens. To further study the conserved function of gC, we replaced 301B/1 gC with MDV gC and this virus also efficiently spread in chickens. These data suggest the essential function of alphaherpesvirus gC proteins is conserved and can be exploited during the generation of future vaccines against MD that affects the poultry industry worldwide.
RCVS–TCH score can predict reversible cerebral vasoconstriction syndrome in patients with thunderclap headache
Authors: Cho Soohyun , Lee Mi Ji , Gil Young Eun , Chung Chin-Sang
Published: April 2021

Reversible cerebral vasoconstriction syndrome (RCVS) is one of the most important differential diagnosis in patients with thunderclap headache (TCH). We aimed to develop a new scoring system for RCVS in patients with TCH. We retrospectively analyzed 72 patients enrolled in the prospective study of TCH conducted in 2015–2016 (derivation set). We identified possible predictors for the diagnosis of RCVS and constructed a prediction model (RCVS–TCH score) using the multivariable logistic regression model. Diagnostic performance was validated to an independent validation set from our headache registry. The derivation set comprised 41 patients with RCVS and 31 with non-RCVS, and the validation set included 253 patients with TCH (165 with RCVS and 88 with non-RCVS). The RCVS–TCH score (range: 0–12) contained four predictors: recurrent TCHs, female sex, triggering factor for TCH (single or multi) and blood pressure surge. The C-index of RCVS–TCH score was 0.929 (95% CI = 0.874–0.984). The RCVS–TCH score ≥ 7 had a sensitivity of 80% and a specificity of 97% in discriminating RCVS from non-RCVS. In the validation set, RCVS–TCH score showed a C-index of 0.861 (95% CI = 0.815–0.908). In our study, the RCVS–TCH showed good performance, which may aid the diagnosis of RCVS among patients with TCH.
Population structure and genetic diversity of invasive Fall Armyworm after 2 years of introduction in India
Authors: Nayyar N. , Gracy R. G. , Ashika T. R. , Mohan G. , Swathi R. S. , Mohan M. , Chaudhary M. , Bakthavatsalam N. , Venkatesan T.
Published: April 2021

Fall Armyworm (FAW),Spodoptera frugiperda, is a polyphagous pest capable of feeding over 80 plant species and was indigenous to the Western Hemisphere. Within a span of 4 years, FAW has established itself throughout most of the regions in Africa and Asia causing significant losses in maize production. Owing to its revamped distribution range, it would be prudent to analyze the ensuing genetic changes and study the emerging phylogeographic patterns across the world. In this regard, we would like to provide a current snapshot of genetic diversity of FAW in India 2 years after the initial introduction and compare it with the worldwide diversity in order to trace the origins and evolutionary trajectories of FAW in India. We have investigated around 190 FAW samples from different regions in India for strain identity and polymorphism analysis on the basis of partial mitochondrialcytochrome oxidaseI (COI) gene sequences. Apart from the ancestral rice and corn strain haplotype, our study demonstrates the presence of 14 more haplotypes unique to India at a haplotype diversity of 0.356. We were also able to record inter-strain hybrid haplotypes of rice and corn strains in India. Regional heterogeneity within Indian populations seems to be quite low representative of extensive migration of FAW within India. Distribution analysis of pairwise differences and rejection of neutrality tests suggest that the FAW population in India might be undergoing expansion. Our data is consistent with the findings suggesting a recent and common origin for invasive FAW populations in Asia and Africa, and does not indicate multiple introductions to India. This study reports the highest genetic diversity for Indian FAW populations to date and will be useful to track the subsequent evolution of FAW in India. The findings would have important ramifications for FAW behavior and composition throughout the world.