bluuebunny/crossref_metadata_2025 huggingface dataset:
Updated Meta-Analysis of Randomized Controlled Trials Comparing External Fixation to Intramedullary Nailing in the Treatment of Open Tibial Fractures
Authors: Jeremić Danilo , Rajovic Nina , Gluscevic Boris , Krivokapic Branislav , Rajkovic Stanislav , Bogosavljevic Nikola , Davidovic Kristina , Tomic Slavko
Published: July 2023

Background: The purpose of this study was to collect all available randomized controlled trials (RCT) on the treatment of open tibial fractures with an external fixator (EF) and intramedullary nailing (IMN) for meta-analysis to provide reliable evidence-based data for clinical decision-making. Material and methods: The systematic review was undertaken in accordance with Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) and AMSTAR (Assessing the Methodological Quality of Systematic Review). An electronic search of PubMed, Cochrane Library, and Web of Science was performed until 1 March 2023 to identify RCTs which compared either IMN or EF to fix the open tibial fracture. Outcome measures were: postoperative superficial and deep infection, time to union, delayed union, malunion, nonunion and hardware failure. In addition, pain and health-related quality of life were evaluated after 3 and 12 months of follow-up. Results: Sixteen publications comprising 1011 patients were included in the meta-analysis. The pooled results suggested that the IMN technique had a lower postoperative superficial infection and malunion rate (RR = 3.56, 95%CI = 2.56–4.95 and RR = 1.96, 95%CI = 1.12–3.44, respectively), but higher hardware failure occurrence in contrast to EF (RR = 0.30; 95%CI = 0.13–0.69). No significant differences were found in the union time, delayed union or nonunion rate, and postoperative deep infection rate between the treatments. Lower levels of pain were found in the EF group (RR = 0.05, 95%CI = 0.02–0.17, p < 0.001). A difference in quality of life favoring IMN after 3 months was found (RR = −0.04, 95%CI = −0.05–0.03, p < 0.001), however, no statistical difference was found after 12 months (RR = 0.03, 95%CI = −0.05–0.11, p = 0.44). Conclusions: Meta-analysis presented reduced incidence rates of superficial infection, malunion, and health-related quality of life 3 months after treatment in IMN. However, EF led to a significant reduction in pain and incidence rate of hardware failure. Postoperative deep infection, delayed union, nonunion and health-related quality of life 12 months following therapy were similar between groups. More high-quality RCTs should be conducted to provide reliable evidence-based data for clinical decision-making.
Recurrent C3 Glomerulonephritis along with BK-Virus-Associated Nephropathy after Kidney Transplantation: A Case Report
Authors: Lim Jeong-Hoon , Shin Seong-Won , Kim Mee-Seon , Han Man-Hoon , Kim Yong-Jin , Jung Hee-Yeon , Choi Ji-Young , Cho Jang-Hee , Park Sun-Hee , Kim Yong-Lim , Hwang Deokbi , Yun Woo-Sung , Kim Hyung-Kee , Huh Seung , Yoo Eun Sang , Won Dong Il , Kim Chan-Duck
Published: July 2023

C3 glomerulonephritis (C3GN) is a rare cause of end-stage kidney disease and frequently recurrent in allografts following kidney transplantation (KT). Herein, we describe the case of a kidney transplant recipient who developed recurrent C3GN along with BK-virus-associated nephropathy (BKVAN) following KT. A 33-year-old man diagnosed with membranoproliferative glomerulonephritis 17 years ago underwent preemptive KT with a donor kidney from his aunt. Proteinuria gradually increased after 3 months following KT, and graft biopsy was performed 30 months after KT. Histopathological examination revealed recurrent C3GN. The dosages of triple immunosuppressive maintenance therapy agents were increased. Subsequently, serum C3 levels recovered to normal levels. However, at 33 months following KT, the BK viral load increased and graft function gradually deteriorated; a second graft biopsy was performed at 46 months following KT, which revealed BKVAN and decreased C3GN activity. The dosages of immunosuppressive agents were decreased; subsequently, BKVAN improved and graft function was maintained with normal serum C3 levels at 49 months following KT. This case indicates that C3GN is highly prone to recurrence following KT and that immunosuppressive therapy for C3GN increases the risk of BKVAN.
A Comparative Study of Tumor-Specificity and Neurotoxicity between 3-Styrylchromones and Anti-Cancer Drugs
Authors: Abe Tomoyuki , Sakagami Hiroshi , Amano Shigeru , Uota Shin , Bandow Kenjiro , Uesawa Yoshihiro , U Shiori , Shibata Hiroki , Takemura Yuri , Kimura Yu , Takao Koichi , Sugita Yoshiaki , Sato Akira , Tanuma Sei-ichi , Takeshima Hiroshi
Published: July 2023

Background. Many anti-cancer drugs used in clinical practice cause adverse events such as oral mucositis, neurotoxicity, and extravascular leakage. We have reported that two 3-styrylchromone derivatives, 7-methoxy-3-[(1E)-2-phenylethenyl]-4H-1-benzopyran-4-one (Compound A) and 3-[(1E)-2-(4-hydroxyphenyl)ethenyl]-7-methoxy-4H-1-benzopyran-4-one (Compound B), showed the highest tumor-specificity against human oral squamous cell carcinoma (OSCC) cell lines among 291 related compounds. After confirming their superiority by comparing their tumor specificity with newly synthesized 65 derivatives, we investigated the neurotoxicity of these compounds in comparison with four popular anti-cancer drugs. Methods: Tumor-specificity (TSM, TSE, TSN) was evaluated as the ratio of mean CC50 for human normal oral mesenchymal (gingival fibroblast, pulp cell), oral epithelial cells (gingival epithelial progenitor), and neuronal cells (PC-12, SH-SY5Y, LY-PPB6, differentiated PC-12) to OSCC cells (Ca9-22, HSC-2), respectively. Results: Compounds A and B showed one order of magnitude higher TSM than newly synthesized derivatives, confirming its prominent tumor-specificity. Docetaxel showed one order of magnitude higher TSM, but two orders of magnitude lower TSE than Compounds A and B. Compounds A and B showed higher TSM, TSE, and TSN values than doxorubicin, 5-FU, and cisplatin, damaging OSCC cells at concentrations that do not affect the viability of normal epithelial and neuronal cells. QSAR prediction based on the Tox21 database suggested that Compounds A and B may inhibit the signaling pathway of estrogen-related receptors.
Optimizing Heat Treatment to Improve the Microstructures and Mechanical Properties of 5CrNiMoV Steel
Authors: Huang Wanhui , Lei Liping , Fang Gang
Published: July 2023

A strategy combining intercritical quenching, pre-tempering, and tempering processes was implemented to optimize the microstructures and mechanical properties of 5CrNiMoV steel. By intercritically quenching at 1050 °C, pr-tempering at 600 °C, and tempering at 550 °C, the steel exhibited a comprehensive performance with a yield strength of 1120 MPa, an ultimate tensile strength of 1230 MPa, and an elongation of 8.2%. The high strength of the steel is attributed to the presence of tempered martensite and abundant secondary carbides. The favorable ductility is mainly provided by the pearlite inherited from intercritical quenching and tempering. Additionally, the precipitation of secondary carbides not only enhances precipitation strengthening, but also reduces the dislocation density and lattice strain of the matrix, thereby enhancing strength and ductility. This study offers a scheme for producing strong and ductile 5CrNiMoV steel.
Deep Processing of Dump Slag from the Copper-Nickel Industry
Authors: Kasikov Alexandr G. , Shchelokova Elena A. , Timoshchik Olga A. , Semushin Vasilij V.
Published: July 2023

This work proposes an environmentally safe and economically feasible method of waste copper-nickel production slag utilization (Kola Mining-Metallurgical Company, Nornickel, Kola Peninsula, Russia). This process involves the decomposition of slag by diluted solutions of sulfuric acid (7–10 wt.% H2SO4) with a transfer in a solution of more than 70% silicon, 77% iron and 78% magnesium, and a concentration of non-ferrous metals in the residue (~70%). Copper ions were used in the leaching stage to prevent the release of hydrogen sulfide into the working atmosphere. Dehydration of the solution, followed by washing of water-soluble sulphates from silica, was carried out to separate silica from the leaching solution. The dehydration temperature effect on the silica structural characteristics was determined. The possibility of recovering non-ferrous metals from solutions after silica extraction by precipitation, in the form of copper cementite, and the sum of nickel and cobalt sulfides, was evaluated. Pigment-grade iron dioxide, magnesium sulphate and aluminium hydroxide were obtained by dehydration of the solution after extraction of base metals, calcination and other operations. Sulfuric acid leaching resulted in the disclosure of sulfide grains encapsulated in ferrosilicate, which is a favorable factor for flotation. The depleted residue can be successfully used in the construction industry.
Exposure Factors in Health Risk Assessment of Heavy Metal(loid)s in Soil and Sediment
Authors: Miletić Andrijana , Lučić Milica , Onjia Antonije
Published: July 2023

Heavy metal(loid)s (HMs) play an important role in economic development since they are used in various branches of industry. However, all industrial activities emit HMs into the environment, where they are no longer useful but potentially toxic. It has been observed that HMs enter the soil and sediment, and potential human health risk may arise due to their excessive accumulation. Having in mind the importance of assessing the risk due to HMs in these media, we analyzed published works in the last decade and created a summary of exposure factors in health risk models for HMs in soil and sediment. This analysis revealed a remarkable increase in the number of publications about health risk assessment of HMs, especially in the last few years. Since many differences in the values of the exposure factors and their distributions were noted, this study focused on elucidating these differences. Non-carcinogenic and carcinogenic health risk assessment models were evaluated through a deterministic approach that is prevalent in use, and a probabilistic one, which is gaining more and more attention in research. In the end, guided by the studied literature, we propose the values and distributions for the exposure factors.
Overview of Surface Modification Strategies for Improving the Properties of Metastable Austenitic Stainless Steels
Authors: Rezayat Mohammad , Karamimoghadam Mojtaba , Moradi Mahmoud , Casalino Giuseppe , Roa Rovira Joan Josep , Mateo Antonio
Published: July 2023

Metastable austenitic stainless steels (MASS) are widely used in various industrial applications due to their exceptional compromise between mechanical properties and corrosion resistance. However, the mechanical properties of these materials can be further enhanced by surface treatments. This paper reviews various surface treatment methodologies used to improve the mechanical properties of MASS, with particular attention to laser treatments. The effects of these surface treatments on the microstructure and chemical composition in the thermal affected zone of the MASS are discussed, and their impact on the material’s mechanical properties, such as hardness, tensile strength, and fatigue life, are investigated in detail. Additionally, the paper highlights the limitations of these surface treatments and points out some areas where further research is needed. The findings presented can be used to guide the selection of appropriate surface treatment techniques for specific applications, ultimately improving the performance and lifespan of MASS in various industrial settings.
Puzzles of Surface Segregation in Binary Pt–Pd Nanoparticles: Molecular Dynamics and Thermodynamic Simulations
Authors: Samsonov Vladimir , Romanov Alexander , Talyzin Igor , Lutsay Alexander , Zhigunov Dmitriy , Puytov Vladimir
Published: July 2023

Up till now, there have been extremely contradictory opinions and inadequate results concerning surface segregation in binary platinum–palladium (Pt–Pd) nanoparticles, including the problems regarding segregating components, as well as the size and temperature dependences of segregation. Taking into account such a situation, we investigated the surface segregation in Pt–Pd nanoparticles by combining atomistic (molecular dynamics) and thermodynamic simulations. For molecular dynamics experiments, the well-known program LAMMPS and the embedded atom method were employed. In the course of the atomistic simulations, two different sets of parameterizations for the Pt–Pt, Pd–Pd, and Pt–Pd interatomic interaction potentials were used. The thermodynamic simulation was based on solving the Butler equation by employing several successive approximations. The results obtained via atomistic simulation and thermodynamic simulation on the basis of the Butler equation were compared with each other, as well as with predictions that were based on the Langmuir–McLean equation and some experimental data. Both simulation methods (atomistic and thermodynamic) predicted the surface segregation of Pd, which diminishes with the nanoparticle size and with increasing temperature. Our simulation results do not confirm the predictions of some authors on surface segregation inversion, i.e., the reversal from the surface segregation of Pd to the surface segregation of Pt when diminishing the nanoparticle size.
Fatty Liver Index and Its Association with 10-Year Atherosclerotic Cardiovascular Disease Risk: Insights from a Population-Based Cross-Sectional Study in China
Authors: Zhou Jing , Fan Jing , Zhang Xiaoyun , You Lili , Lin Diaozhu , Huang Chulin , Li Feng , Sun Kan
Published: July 2023

This cross-sectional study aimed to investigate the association between non-alcoholic fatty liver disease (NAFLD) and atherosclerotic cardiovascular disease (ASCVD), a global public health concern. A total of 9044 out of 10,104 adults from Guangzhou, China, were included in the analysis. We utilized the fatty liver index (FLI), a noninvasive indicator of NAFLD, and the pooled cohort equations (PCE) based on the 2013 ACC/AHA Guideline, the China-PAR model, and the Framingham Risk Score to assess the 10-year ASCVD risk. The results demonstrated a significant association between FLI and 10-year ASCVD risk (p < 0.001). Adjusted for age, individuals with high FLI (≥60) had an odds ratio of 3.91 (95% CI 2.52–6.08) compared to those with low FLI (<30). These findings persisted after adjusting for metabolic indicators. Notably, this association was consistently observed across all three risk prediction models: the PCE model, the China-PAR model, and the Framingham Risk Score. In conclusion, our study provides evidence supporting FLI as a reliable indicator of increased 10-year ASCVD risk in Chinese NAFLD patients. FLI serves as a valuable marker for early detection of ASCVD, highlighting its potential in clinical practice for risk assessment and prevention strategies.
Screening for Novel Beneficial Environmental Bacteria for an Antagonism-Based Erwinia amylovora Biological Control
Authors: Esteban-Herrero Guillermo , Álvarez Belén , Santander Ricardo D. , Biosca Elena G.
Published: July 2023

Erwinia amylovora, the bacterial species responsible for fire blight, causes major economic losses in pome fruit crops worldwide. Chemical control is not always effective and poses a serious threat to the environment and human health. Social demands for eco-sustainable and safe control methods make it necessary to search for new biocontrol strategies such as those based on antagonists. A bacterial collection from different fire blight-free Mediterranean environments was tested for antagonistic activity against Spanish strains of E. amylovora. Antagonistic assays were carried out in vitro in culture medium and ex vivo in immature loquat and pear fruits. Results revealed that 12% of the 82 bacterial isolates tested were able to inhibit the growth of several strains of the pathogen. Some of the isolates also maintained their antagonistic activity even after chloroform inactivation. Selected isolates were further tested ex vivo, with several of them being able to delay and/or reduce fire blight symptom severity in both loquats and pears and having activity against some E. amylovora strains. The isolates showing the best antagonism also produced different hydrolases linked to biocontrol (protease, lipase, amylase, and/or DNAse) and were able to fix molecular nitrogen. Based on this additional characterization, four biocontrol strain candidates were further selected and identified using MALDI-TOF MS. Three of them were Gram-positive bacteria belonging to Bacillus and Paenarthrobacter genera, and the fourth was a Pseudomonas strain. Results provide promising prospects for an improvement in the biological control strategies against fire blight disease.
Contribution of Manure-Spreading Operations to Bioaerosols and Antibiotic Resistance Genes’ Emission
Authors: Baghdadi Mahsa , Brassard Patrick , Godbout Stéphane , Létourneau Valérie , Turgeon Nathalie , Rossi Florent , Lachance Émie , Veillette Marc , Gaucher Marie-Lou , Duchaine Caroline
Published: July 2023

Manure spreading from farm animals can release antibiotic-resistant bacteria (ARB) carrying antimicrobial resistance genes (ARGs) into the air, posing a potential threat to human and animal health due to the intensive use of antibiotics in the livestock industry. This study analyzed the effect of different manure types and spreading methods on airborne bacterial emissions and antibiotic resistance genes in a controlled setting. Cow, poultry manure, and pig slurry were spread in a confined environment using two types of spreaders (splash plate and dribble bar), and the resulting emissions were collected before, during, and after spreading using high-volume air samplers coupled to a particle counter. Total bacteria, fecal indicators, and a total of 38 different subtypes of ARGs were further quantified by qPCR. Spreading poultry manure resulted in the highest emission rates of total bacteria (1011 16S gene copies/kg manure spread), Archaea (106 16S gene copies/kg manure), Enterococcus (105 16S gene copies/kg manure), and E. coli (104 16S gene copies/kg manure), followed by cow manure and pig slurry with splash plates and the dribble bar. Manure spreading was associated with the highest rates of airborne aminoglycoside genes for cow and poultry (106 gene copies/kg manure), followed by pig slurry (104 gene copies/kg manure). This study shows that the type of manure and spreading equipment can affect the emission rates of airborne bacteria, and ARGs.
Intelligent Biological Networks: Improving Anti-Microbial Resistance Resilience through Nutritional Interventions to Understand Protozoal Gut Infections
Authors: Karpe Avinash V. , Beale David J. , Tran Cuong D.
Published: July 2023

Enteric protozoan pathogenic infections significantly contribute to the global burden of gastrointestinal illnesses. Their occurrence is considerable within remote and indigenous communities and regions due to reduced access to clean water and adequate sanitation. The robustness of these pathogens leads to a requirement of harsh treatment methods, such as medicinal drugs or antibiotics. However, in addition to protozoal infection itself, these treatments impact the gut microbiome and create dysbiosis. This often leads to opportunistic pathogen invasion, anti-microbial resistance, or functional gastrointestinal disorders, such as irritable bowel syndrome. Moreover, these impacts do not remain confined to the gut and are reflected across the gut–brain, gut–liver, and gut–lung axes, among others. Therefore, apart from medicinal treatment, nutritional supplementation is also a key aspect of providing recovery from this dysbiosis. Future proteins, prebiotics, probiotics, synbiotics, and food formulations offer a good solution to remedy this dysbiosis. Furthermore, nutritional supplementation also helps to build resilience against opportunistic pathogens and potential future infections and disorders that may arise due to the dysbiosis. Systems biology techniques have shown to be highly effective tools to understand the biochemistry of these processes. Systems biology techniques characterize the fundamental host–pathogen interaction biochemical pathways at various infection and recovery stages. This same mechanism also allows the impact of the abovementioned treatment methods of gut microbiome remediation to be tracked. This manuscript discusses system biology approaches, analytical techniques, and interaction and association networks, to understand (1) infection mechanisms and current global status; (2) cross-organ impacts of dysbiosis, particularly within the gut–liver and gut–lung axes; and (3) nutritional interventions. This study highlights the impact of anti-microbial resistance and multi-drug resistance from the perspective of protozoal infections. It also highlights the role of nutritional interventions to add resilience against the chronic problems caused by these phenomena.
Molecular Characterization of Clinical Linezolid-Resistant Staphylococcus epidermidis in a Tertiary Care Hospital
Authors: Campmann Florian , Tönnies Hauke , Böing Christian , Schuler Franziska , Mellmann Alexander , Schwierzeck Vera
Published: July 2023

Staphylococcus epidermidis (S. epidermidis) is part of the human skin flora but can also cause nosocomial infections, such as device-associated infections, especially in vulnerable patient groups. Here, we investigated clinical isolates of linezolid-resistant S. epidermidis (LRSE) collected from blood cultures at the University Hospital Münster (UHM) during the period 2020–2022. All detected isolates were subjected to whole genome sequencing (WGS) and the relatedness of the isolates was determined using core genome multilocus sequence typing (cgMLST). The 15 LRSE isolates detected were classified as multilocus sequence type (ST) 2 carrying the staphylococcal cassette chromosome mec (SCCmec) type III. All isolates showed high-level resistance for linezolid by gradient tests. However, no isolate carried the cfr gene that is often associated with linezolid resistance. Analysis of cgMLST data sets revealed a cluster of six closely related LRSE isolates, suggesting a transmission event on a hematological/oncological ward at our hospital. Among the included patients, the majority of patients affected by LRSE infections had underlying hematological malignancies. This confirms previous observations that this patient group is particularly vulnerable to LRSE infection. Our data emphasize that the surveillance of LRSE in the hospital setting is a necessary step to prevent the spread of multidrug-resistant S. epidermidis among vulnerable patient groups, such as patients with hematological malignancies, immunosuppression or patients in intensive care units.
Long-Term Application of a Synbiotic Chitosan and Acinetobacter KU011TH Mixture on the Growth Performance, Health Status, and Disease Resistance of Hybrid Catfish (Clarias gariepinus × C. macrocephalus) during Winter
Authors: Say Pisey , Nimikul Sukkrit , Bunnoy Anurak , Na-Nakorn Uthairat , Srisapoome Prapansak
Published: July 2023

The effects of potential synbiotic chitosan and Acinetobacter KU011TH mixture on growth performance, immune response, and A. hydrophila resistance were investigated for the first time. The control group was fed a basal diet (A), and group B was given the formula B diet that was supplemented with chitosan at 20 mL/kg diet via top dressing. The other synbiotic groups, C, D, and E, were top-dressed with the target probiotics at 1 × 108, 1 × 109, and 1 × 1010 CFU/kg diet, respectively, and coated with the same concentration of chitosan. Fish were continuously fed the five different feeds for 16 weeks during winter. At the end of the trial, the growth parameters of the test groups did not significantly differ from those of the control (p > 0.05). All the symbiotic-chitosan treatments significantly increased various hematological and serum immune parameters. Moreover, the expression levels of immune-related genes were strongly elevated in the head kidney and spleen, whereas upregulated expression was observed in the liver and whole blood (p < 0.05). Survival analysis indicated that fish in groups B and C showed significantly higher survival (84.33 ± 2.21 and 79.50 ± 6.34%) than those in groups A, D and E (55.33 ± 8.82%–74.00 ± 6.50) (p < 0.05) after injection with A. hydrophila for 14 days.
Assessment of Infection Prevalence and Intensity of Disease-Causing Parasitic Protozoans Perkinsus marinus and Haplosporidium nelsoni in Georgia Oysters
Authors: Batchelor Sarah , Harrison J. Scott , Greiman Stephen E. , Treible Laura M. , Carroll John M.
Published: July 2023

Eastern oysters, Crassostrea virginica, are ecologically and economically important coastal species which provide a commercially valuable food product while also improving water quality through filtration, protecting shorelines, and providing habitat. The protozoan parasites Perkinsus marinus and Haplosporidium nesloni commonly infect oysters along the United States Atlantic and Gulf coasts and have been linked to poor oyster health and mass mortality events. In this study, wild oysters were collected from multiple reefs within four tidal creeks along the coast of Georgia to investigate P. marinus and H. nelsoni prevalence and intensity, their potential impact on oyster health, and identify possible drivers of the parasites. A second study occurred on four sites on Sapelo Island, Georgia, with continuous water quality monitoring data to further elucidate potential drivers. Oyster density and condition index, a proxy for health, were measured, and parasites were quantified using a TaqMan probe based quantitative real-time PCR within gill tissue. Real-time PCR showed that 86% of oysters tested were infected by one or both parasites in the coast-wide survey, and 93% of oysters from Sapelo Island were also infected by one or both parasites. Prevalence and infection intensity for both P. marinus and H. nelsoni varied across sites. Overall impacts on oysters were complex—intensity was not linked to oyster metrics in the coastwide study, but oyster condition was negatively correlated with P. marinus prevalence in the Sapelo Island study. Several relationships between both parasites and water quality parameters were identified, providing valuable information about potential drivers that should be investigated further.
The Relative Positioning of Genotyping and Phenotyping for Tuberculosis Resistance Screening in Two EU National Reference Laboratories in 2023
Authors: Anthony Richard , Groenheit Ramona , Mansjö Mikael , de Zwaan Rina , Werngren Jim
Published: July 2023

The routine use of whole genome sequencing (WGS) as a reference typing technique for Mycobacterium tuberculosis epidemiology combined with the catalogued and extensive knowledge base of resistance-associated mutations means an initial susceptibility prediction can be derived from all cultured isolates in our laboratories based on WGS data alone. Preliminary work has confirmed, in our low-burden settings, these predictions are for first-line drugs, reproducible, robust with an accuracy similar to phenotypic drug susceptibility testing (pDST) and in many cases able to also predict the level of resistance (MIC). Routine screening for drug resistance by WGS results in approximately 80% of the isolates received being predicted as fully susceptible to the first-line drugs. Parallel testing with both WGS and pDST has demonstrated that routine pDST of genotypically fully susceptible isolates yields minimal additional information. Thus, rather than re-confirming all fully sensitive WGS-based predictions, we suggest that a more efficient use of available mycobacterial culture capacity in our setting is the development of a more extensive and detailed pDST targeted at any mono or multi-drug-resistant isolates identified by WGS screening. Phenotypic susceptibility retains a key role in the determination of an extended susceptibility profile for mono/multi-drugresistant isolates identified by WGS screening. The pDST information collected is also needed to support the development of future catalogues of resistance-associated mutations.
Trace Elements in Magnetite and Origin of the Mariela Iron Oxide-Apatite Deposit, Southern Peru
Authors: Ye Zhenchao , Mao Jingwen , Yang Cai , Usca Juan , Li Xinhao
Published: July 2023

To better understand the origin of the Andean iron oxide-apatite (IOA) deposits, we conducted a study on the geology and magnetite geochemistry of the Mariela IOA deposit in the Peruvian Iron Belt, central Andes. The Mariela deposit is hosted by gabbroic and dioritic intrusions. The major high-grade massive ores are primarily composed of magnetite and contain variable amounts of apatite and actinolite. Based on textural and geochemical characteristics, three different types of magnetite are recognized: Type I magnetite occurs in the massive magnetite ore, subclassified as inclusion-rich (I-a), inclusion-free (I-b), and mosaic (I-c); Type II magnetite is associated with abundant actinolite and titanite; and Type III magnetite is disseminated in altered host rocks. However, the magnetite geochemistry data for the Mariela deposit plot shows different genetic areas in [Ti + V] vs. [Al + Mn], Ti vs. V, and Fe vs. V/Ti discrimination diagrams, indicating a paradox of magmatic and hydrothermal origins. Our interpretation is as follows: Type I-a magnetite had an initial magmatic or high-temperature magmatic-hydrothermal origin, with slight modifications during transportation and subsequent hydrothermal precipitation (Types I-b and I-c). Type II magnetite is formed from hydrothermal fluid due to the presence of abundant actinolite. Disseminated magnetite (Type III) and veinlet-type magnetite formed after fluid replacement of the host rock. We stress that elemental discrimination diagrams should be combined with field studies and textural observations to provide a reasonable geological interpretation. A clear cooling trend is evident among the three subtypes of Type I magnetite (I-a, I-b, and I-c), as well as Type II and Type III magnetite, with average formative temperatures of 737 °C, 707 °C, 666 °C, 566 °C, and 493 °C, respectively. The microanalytical data on magnetite presented here support the magmatic-hydrothermal flotation model to explain the origin of IOA deposits in the Coastal Cordillera of Southern Peru.
Petrogenesis and Geodynamic Implications of the North Kudi Granitoids in the West Kunlun Orogen, NW China
Authors: Wu Kai , Gong Meijun , Jiang Xiaoyan , Ling Mingxing , Yuan Honglin
Published: July 2023

The petrogenesis of aluminous A-type granites is a contentious subject. Here, we focused on the North Kudi pluton in the Western Kunlun orogen to investigate the origin and magmatic processes responsible for generating A-type granites. Samples from the North Kudi pluton are metaluminous to weakly peraluminous. K-feldspar granite samples are characterized by high alkali and Cl contents, high HFSE concentrations and FeO/MgO, low F content, negative Ba, Sr, P, Eu, and Ti anomalies, and high magma temperature (>903 °C), showing affinity to aluminous A-type granites. However, their 10,000 × Ga/Al ratios (1.86–3.18) are relatively lower than typical A-type granites. Quartz-monzonite displays similar Sr–Nd isotopic compositions and Ga/Al ratios with the K-feldspar granite but less pronounced negative Sr, P, and Ti anomalies and no discernable negative Ba and Eu anomalies. Fractional crystallization of alkali-rich, Cl-rich, and F-poor magmas can generate some typical geochemical characteristics of A-type granites (e.g., negative Ba, Sr, P, and Eu anomalies) but has little influence on Ga/Al ratios. The enriched Sr–Nd isotopic compositions, high Cl and alkali contents, arc-like geochemical features, and the involvement of slab-derived components, as indicated by high zircon Ce4+/Ce3+ (up to 503), suggest that the North Kudi pluton was possibly derived from partial melting of the metasomatized lithospheric mantle in the time of asthenosphere upwelling during the post-collisional stage. The emplacement of the North Kudi pluton thus indicates the onset of the post-orogenic stage in the Western Kunlun orogen.
Semi-Empirical Pseudopotential Method for Graphene and Graphene Nanoribbons
Authors: Paudel Raj Kumar , Ren Chung-Yuan , Chang Yia-Chung
Published: July 2023

We implemented a semi-empirical pseudopotential (SEP) method for calculating the band structures of graphene and graphene nanoribbons. The basis functions adopted are two-dimensional plane waves multiplied by several B-spline functions along the perpendicular direction. The SEP includes both local and non-local terms, which were parametrized to fit relevant quantities obtained from the first-principles calculations based on the density-functional theory (DFT). With only a handful of parameters, we were able to reproduce the full band structure of graphene obtained by DFT with a negligible difference. Our method is simple to use and much more efficient than the DFT calculation. We then applied this SEP method to calculate the band structures of graphene nanoribbons. By adding a simple correction term to the local pseudopotentials on the edges of the nanoribbon (which mimics the effect caused by edge creation), we again obtained band structures of the armchair nanoribbon fairly close to the results obtained by DFT. Our approach allows the simulation of optical and transport properties of realistic nanodevices made of graphene nanoribbons with very little computation effort.
Probing Polarity and pH Sensitivity of Carbon Dots in Escherichia coli through Time-Resolved Fluorescence Analyses
Authors: Yahav Gilad , Pawar Shweta , Lipovsky Anat , Gupta Akanksha , Gedanken Aharon , Duadi Hamootal , Fixler Dror
Published: July 2023

Intracellular monitoring of pH and polarity is crucial for understanding cellular processes and functions. This study employed pH- and polarity-sensitive nanomaterials such as carbon dots (CDs) for the intracellular sensing of pH, polarity, and viscosity using integrated time-resolved fluorescence anisotropy (FA) imaging (TR-FAIM) and fluorescence lifetime (FLT) imaging microscopy (FLIM), thereby enabling comprehensive characterization. The functional groups on the surface of CDs exhibit sensitivity to changes in the microenvironment, leading to variations in fluorescence intensity (FI) and FLT according to pH and polarity. The FLT of CDs in aqueous solution changed gradually from 6.38 ± 0.05 ns to 8.03 ± 0.21 ns within a pH range of 2–8. Interestingly, a complex relationship of FI and FLT was observed during measurements of CDs with decreasing polarity. However, the FA and rotational correlation time (θ) increased from 0.062 ± 0.019 to 0.112 ± 0.023 and from 0.49 ± 0.03 ns to 2.01 ± 0.27 ns, respectively. This increase in FA and θ was attributed to the higher viscosity accompanying the decrease in polarity. Furthermore, CDs were found to bind to three locations in Escherichia coli: the cell wall, inner membrane, and cytoplasm, enabling intracellular characterization using FI and FA decay imaging. FLT provided insights into cytoplasmic pH (7.67 ± 0.48), which agreed with previous works, as well as the decrease in polarity in the cell wall and inner membrane. The CD aggregation was suspected in certain areas based on FA, and the θ provided information on cytoplasmic heterogeneity due to the aggregation and/or interactions with biomolecules. The combined TR-FAIM/FLIM system allowed for simultaneous monitoring of pH and polarity changes through FLIM and viscosity variations through TR-FAIM.
Microgravimetric Modeling—A New Method for Extracting Adsorption Parameters of Functionalized MIL-101(Cr)
Authors: Zhang Xu , Tian Bo , Ma Zhiheng , Wang He , Cheng Zhixuan , Xu Jiaqiang
Published: July 2023

As a volatile air pollutant, formaldehyde can enter people’s living environment through interior decoration, furniture and paint, causing serious harm to human health. Therefore, it is necessary to develop a sensor for the real-time detection of formaldehyde in low concentrations. According to the chemical interaction between amino groups and formaldehyde, a MIL-101(Cr) aminated-material-based formaldehyde cantilever sensor was prepared, of which ethylenediamine- functionalized MIL-101(Cr) named ED-MIL-101(Cr)) showed the best gas sensing performance. Using quasi-in situ infrared spectroscopy, ED-MIL-101(Cr) was found bound to formaldehyde through a Schiff base. The adsorption enthalpy of formaldehyde-bound ED-MIL-101(Cr) was −52.6 kJ/mol, which corresponds to weak chemical adsorption, so the material showed good selectivity. In addition, ED-MIL-101(Cr) has the most active sites, so its response value to formaldehyde is larger and it takes longer to reach saturation adsorption than bare MIL-101(Cr). Through the research on the gas sensing performance of functionalized MIL-101(Cr) material, we found that it has a strong application potential in the field of formaldehyde monitoring, and the material performance can be quantitatively and accurately evaluated through combining calculation and experimentation for understanding the gas sensing mechanism.
Drivers of Nutritional Change in Pakistan: A Decomposition Analysis
Authors: Rehman Azka , Qing Ping , Cui Xia
Published: July 2023

The global reduction in child undernutrition highlights the international and national commitment to prioritizing future generations’ health. This study aims to find out the previous trends in nutrition and the key drivers of these changes in different regions of Pakistan. For empirical investigation, we employed a regression-based decomposition model by using two distinct rounds of demographic and health surveys: 2012-13 and 2017-18. Results showed children with stunted growth reduced substantially in Balochistan, while Punjab exhibited the highest progress for underweight children. Regression estimates showed that maternal nutritional status and household wealth were more pronounced in reducing all measures of child malnutrition. Some determinants, including mother age at marriage and prenatal visits to the hospital, are significant only for long-term nutritional status—stunting, while mother education contributed to reducing wasted and underweight children. The rest of the factors, like father education and household environment, appear to play a humble role in explaining nutritional improvements. From disaggregated analysis based on different regions, we found that modeled factors used in this study explained changes disproportionately. Thus, it is recommended to use multidimensional nutrition policies incorporating a broader range of sectors, and region-specific programs should be designed for more effective outcomes.
Programs Addressing Food Security for First Nations Peoples: A Scoping Review
Authors: Davies Alyse , Gwynn Josephine , Allman-Farinelli Margaret , Flood Victoria , Dickson Michelle , Turner Nicole , Porykali Bobby , Lock (Ngiyampaa) Mark
Published: July 2023

Access to food is a right that every individual must have to ensure a standard of living that is sufficient for maintaining good health and wellbeing. This review, developed and implemented by a team of First Nations and non-First Nations peoples, aimed to scope the literature on programs addressing food security for First Nations peoples in Australia, Aotearoa/New Zealand, Canada, and the United States of America. Collectively, First Nations groups share continued traumas, disadvantages, and devastation brought upon them as a result of British colonisation. Despite the impacts of colonial conquest, the resilience of First Nations peoples continues through the fight for self-determination, sovereignty, equity, and equality. Three databases and grey literature were searched from 2010. Two reviewers completed screening, data extraction, and critical appraisal. Nine food security programs were included in this review. Five were from the United States of America and four from Canada, with no program from Australia or Aotearoa/New Zealand meeting the inclusion criteria. The programs that appear to be most suitable for addressing food security for First Nations peoples were participatory in design, had community governance, integrated cultural knowledge and food systems to increase the accessibility and availability of cultural foods, incorporated educational components, and utilized collaborations among various agencies. Findings showed that while it is important to address short-term emergency food relief, the aim should be sustainable food security through a longer-term system and policy change underpinned by co-designed research and evaluation.
The Association between Circulating Lipids and Female Infertility Risk: A Univariable and Multivariable Mendelian Randomization Analysis
Authors: Zhu Xiaoqi , Hong Xiang , Wu Jingying , Zhao Fanqi , Wang Wei , Huang Lingling , Li Jiuming , Wang Bei
Published: July 2023

Background: Although observational studies have demonstrated that blood lipids are associated with female infertility, the causality of this association remains unclear. We performed a univariable and multivariable Mendelian randomization (MR) analysis to evaluate the causal relationship between blood lipids and female infertility. Methods: Single-nucleotide polymorphisms associated with lipid traits in univariate analysis were obtained from the Million Veteran Program (MVP) and Global Lipids Genetics Consortium (GLGC), involving up to 215,551 and 188,577 European individuals, respectively. Blood lipids in multivariate analysis were obtained from the latest genome-wide association study meta-analysis with lipid levels in 73 studies encompassing >300,000 participants. Data on female infertility were obtained from the FinnGen Consortium R6 release, which included 6481 samples and 75,450 controls. Subsequently, MR analysis was performed using inverse variance-weighted (IVW), weighted median, weighted-mode, simple-mode and MR-Egger regression to demonstrate the causal relationship between lipids and female infertility. Results: After controlling confounding factors including body mass index and age at menarche, two-sample MR demonstrated that genetically predicted LDL-C and TC were causally associated with the risk of female infertility (When the genetic instruments come from the MVP database, LDL-C and female infertility, IVW OR: 1.13, 95% CI: 1.001–1.269, p = 0.047; TC and female infertility, IVW OR: 1.16, 95% CI: 1.018–1.317, p = 0.025, and when the genetic instruments came from the GLGC database, LDL-C and female infertility, IVW OR: 1.10, 95% CI: 1.008–1.210, p = 0.033; TC and female infertility, IVW OR: 1.14, 95% CI: 1.024–1.258, p = 0.015). However, the IVW estimate showed that HDL-C was not significantly associated with the risk of female infertility (when the genetic instruments came from the MVP database, IVW OR: 1.00, 95% CI: 0.887–1.128, p = 0.999; when the genetic instruments came from the GLGC database, IVW OR: 1.00, 95% CI: 0.896–1.111, p = 0.968). The multivariable MR analysis also provided evidence that LDL-C (OR: 1.12, 95% CI: 1.006–1.243, p = 0.042) was significantly associated with the risk of female infertility after considering the correlation of all lipid-related traits. Conclusion: These findings support a causal relationship between increased LDL-cholesterol and increased female infertility risk. Furthermore, the association between lipid-related traits and female infertility risk merits more studies.
Intermittent Fasting Promotes Weight Loss without Decreasing Performance in Taekwondo
Authors: da Silva Ronaldo Angelo Dias , Szmuchrowski Leszek Antoni , Rosa João Paulo Pereira , Santos Marcos Antônio Pereira dos , de Mello Marco Túlio , Savoi Lucas , Porto Yves Ferreira , de Assis Dias Martins Júnior Francisco , Drummond Marcos Daniel Motta
Published: July 2023

Intermittent fasting (IF) is commonly used by combat sports athletes for weight loss. However, IF can decrease performance. This study aimed to investigate the effect of IF on total body mass (TBM) and Taekwondo performance. Nine athletes (seven male, two female; 18.4 ± 3.3 years) underwent 4 weeks of 12 h IF. TBM, countermovement jump (CMJ), mean kicks (MK), and total number of kicks (TNK) were compared weekly. Performance was measured in the fed state (FED) and fast state (FAST). Results showed decreased TBM in week 1 (62.20 ± 6.56 kg; p = 0.001) and week 2 (62.38 ± 6.83 kg; p = 0.022) compared to pre-intervention (63.58 ± 6.57 kg), stabilizing in week 3 (62.42 ± 6.12 kg), and no significant change in week 4 (63.36 ± 6.20 kg). CMJ performance in week 1 was lower in FED (35.26 ± 7.15 cm) than FAST (37.36 ± 6.77 cm; p = 0.003), but in week 3, FED (38.24 ± 6.45 cm) was higher than FAST (35.96 ± 5.05 cm; p = 0.047). No significant differences were found in MK and TNK in FSKTmult. RPE, KDI, and HR were similar between FED and FAST (p < 0.05). [LAC] was higher post-test compared to pre-test (p = 0.001), with higher concentrations in FED than FAST (p = 0.020). BG was higher in FED than FAST (p < 0.05) before physical tests. Therefore, IF promotes decreased TBM without decreasing performance.
Novel Interaction between a Rabbitfish and Black Corals
Authors: Gress Erika , Bridge Tom C. , Fyfe Justin , Galbraith Gemma
Published: July 2023

Herbivorous fishes play important functional roles in coral reef ecosystems, and their influence on mediating competitive dynamics between corals and macroalgae is well studied. Nonetheless, direct interactions between herbivorous fishes and corals may also be relevant, although these are less studied. Here, we describe a series of observations of schools of the herbivorous streaked rabbitfish (Siganus javus) nibbling on black corals (order Antipatharia) at the SS Yongala wreck, within the Great Barrier Reef Marine Park. We provide a hypothesis that may explain this behaviour, which, if confirmed, would represent a mechanism influencing the health of the corals. Moreover, this interaction extends the typical coral–algae competition for space paradigm and furthers knowledge of complex relationships between coral reef organisms.
Pre/Post-Merger Consistency Test for Gravitational Signals from Binary Neutron Star Mergers
Authors: Breschi Matteo , Carullo Gregorio , Bernuzzi Sebastiano
Published: July 2023

Gravitational waves from binary neutron star (BNS) mergers can constrain nuclear models, predicting their equation of state (EOS). Matter effects on the inspiral-merger signal are encoded in the multipolar tidal polarizability parameters, whose leading order combination is sufficient to capture, with high accuracy, the key features of the merger waveform. Similar EOS-insensitive relations exist for the post-merger signal and can be used to model the emissions from the remnant. Several works suggested that the appearance of new degrees of freedom in high-density post-merger matter can be inferred by observing a violation of these EOS-insensitive relations. Here, we demonstrate a Bayesian method to test such an EOS-insensitive relation between the tidal polarizability parameters (or any other equivalent parameter) and the dominant post-merger frequency using information from the pre-and-post-merger signal. Technically, the method is similar to the inspiral-merger-ringdown consistency tests of General Relativity with binary black holes. However, differently from the latter, BNS pre/post-merger consistency tests are conceptually less informative and they only address the consistency of the assumed EOS-insensitive relation. Specifically, we discuss how such tests cannot conclusively discriminate between an EOS without respecting such a relation and the appearance of new degrees of freedom (or phase transitions) in high-density matter.