bluuebunny/crossref_metadata_2025 huggingface dataset:
Supplementary Table S5 from Bacterial-Driven Inflammation and Mutant BRAF Expression Combine to Promote Murine Colon Tumorigenesis That Is Sensitive to Immune Checkpoint Therapy
Authors: DeStefano Shields Christina E. , White James R. , Chung Liam , Wenzel Alyssa , Hicks Jessica L. , Tam Ada J. , Chan June L. , Dejea Christine M. , Fan Hongni , Michel John , Maiuri Ashley R. , Sriramkumar Shruthi , Podicheti Ram , Rusch Douglas B. , Wang Hao , De Marzo Angelo M. , Besharati Sepideh , Anders Robert A. , Baylin Stephen B. , O'Hagan Heather M. , Housseau Franck , Sears Cynthia L.
Published: April 2023

Differential expression (DESeq2) tables of RNAseq analysis for tumors collected from PDL1 treatment experiment.
Figure S5 from RTK-Dependent Inducible Degradation of Mutant PI3Kα Drives GDC-0077 (Inavolisib) Efficacy
Authors: Song Kyung W. , Edgar Kyle A. , Hanan Emily J. , Hafner Marc , Oeh Jason , Merchant Mark , Sampath Deepak , Nannini Michelle A. , Hong Rebecca , Phu Lilian , Forrest William F. , Stawiski Eric , Schmidt Stephen , Endres Nicholas , Guan Jane , Wallin Jeffrey J. , Cheong Jonathan , Plise Emile G. , Lewis Phillips Gail D. , Salphati Laurent , Heffron Timothy P. , Olivero Alan G. , Malek Shiva , Staben Steven T. , Kirkpatrick Donald S. , Dey Anwesha , Friedman Lori S.
Published: April 2023

Taselisib-mediated degradation of mutant p110a occurs preferentially at the plasma membrane.
Figure S2 from RTK-Dependent Inducible Degradation of Mutant PI3Kα Drives GDC-0077 (Inavolisib) Efficacy
Authors: Song Kyung W. , Edgar Kyle A. , Hanan Emily J. , Hafner Marc , Oeh Jason , Merchant Mark , Sampath Deepak , Nannini Michelle A. , Hong Rebecca , Phu Lilian , Forrest William F. , Stawiski Eric , Schmidt Stephen , Endres Nicholas , Guan Jane , Wallin Jeffrey J. , Cheong Jonathan , Plise Emile G. , Lewis Phillips Gail D. , Salphati Laurent , Heffron Timothy P. , Olivero Alan G. , Malek Shiva , Staben Steven T. , Kirkpatrick Donald S. , Dey Anwesha , Friedman Lori S.
Published: April 2023

Activity of GDC-0077 in combination with Palbociclib and/ or Fulvestrant
Table S7 from Therapeutically Increasing MHC-I Expression Potentiates Immune Checkpoint Blockade
Authors: Gu Shengqing Stan , Zhang Wubing , Wang Xiaoqing , Jiang Peng , Traugh Nicole , Li Ziyi , Meyer Clifford , Stewig Blair , Xie Yingtian , Bu Xia , Manos Michael P. , Font-Tello Alba , Gjini Evisa , Lako Ana , Lim Klothilda , Conway Jake , Tewari Alok K. , Zeng Zexian , Sahu Avinash Das , Tokheim Collin , Weirather Jason L. , Fu Jingxin , Zhang Yi , Kroger Benjamin , Liang Jin Hua , Cejas Paloma , Freeman Gordon J. , Rodig Scott , Long Henry W. , Gewurz Benjamin E. , Hodi F. Stephen , Brown Myles , Liu X. Shirley
Published: April 2023

RNA-seq of bulk B16F10 tumors that underwent different treatments
Table S4 from Matched Targeted Therapy for Pediatric Patients with Relapsed, Refractory, or High-Risk Leukemias: A Report from the LEAP Consortium
Authors: Pikman Yana , Tasian Sarah K. , Sulis Maria Luisa , Stevenson Kristen , Blonquist Traci M. , Apsel Winger Beth , Cooper Todd M. , Pauly Melinda , Maloney Kelly W. , Burke Michael J. , Brown Patrick A. , Gossai Nathan , McNeer Jennifer L. , Shukla Neerav N. , Cole Peter D. , Kahn Justine M. , Chen Jing , Barth Matthew J. , Magee Jeffrey A. , Gennarini Lisa , Adhav Asmani A. , Clinton Catherine M. , Ocasio-Martinez Nicole , Gotti Giacomo , Li Yuting , Lin Shan , Imamovic Alma , Tognon Cristina E. , Patel Tasleema , Faust Haley L. , Contreras Cristina F. , Cremer Anjali , Cortopassi Wilian A. , Garrido Ruiz Diego , Jacobson Matthew P. , Dharia Neekesh V. , Su Angela , Robichaud Amanda L. , Saur Conway Amy , Tarlock Katherine , Stieglitz Elliot , Place Andrew E. , Puissant Alexandre , Hunger Stephen P. , Kim Annette S. , Lindeman Neal I. , Gore Lia , Janeway Katherine A. , Silverman Lewis B. , Tyner Jeffrey W. , Harris Marian H. , Loh Mignon L. , Stegmaier Kimberly
Published: April 2023

Compound sensitivity data for primary patient samples.
Supplementary Figures from Therapeutically Increasing MHC-I Expression Potentiates Immune Checkpoint Blockade
Authors: Gu Shengqing Stan , Zhang Wubing , Wang Xiaoqing , Jiang Peng , Traugh Nicole , Li Ziyi , Meyer Clifford , Stewig Blair , Xie Yingtian , Bu Xia , Manos Michael P. , Font-Tello Alba , Gjini Evisa , Lako Ana , Lim Klothilda , Conway Jake , Tewari Alok K. , Zeng Zexian , Sahu Avinash Das , Tokheim Collin , Weirather Jason L. , Fu Jingxin , Zhang Yi , Kroger Benjamin , Liang Jin Hua , Cejas Paloma , Freeman Gordon J. , Rodig Scott , Long Henry W. , Gewurz Benjamin E. , Hodi F. Stephen , Brown Myles , Liu X. Shirley
Published: April 2023

Supplementary Figures S1-S8
Supplementary Data from Matched Targeted Therapy for Pediatric Patients with Relapsed, Refractory, or High-Risk Leukemias: A Report from the LEAP Consortium
Authors: Pikman Yana , Tasian Sarah K. , Sulis Maria Luisa , Stevenson Kristen , Blonquist Traci M. , Apsel Winger Beth , Cooper Todd M. , Pauly Melinda , Maloney Kelly W. , Burke Michael J. , Brown Patrick A. , Gossai Nathan , McNeer Jennifer L. , Shukla Neerav N. , Cole Peter D. , Kahn Justine M. , Chen Jing , Barth Matthew J. , Magee Jeffrey A. , Gennarini Lisa , Adhav Asmani A. , Clinton Catherine M. , Ocasio-Martinez Nicole , Gotti Giacomo , Li Yuting , Lin Shan , Imamovic Alma , Tognon Cristina E. , Patel Tasleema , Faust Haley L. , Contreras Cristina F. , Cremer Anjali , Cortopassi Wilian A. , Garrido Ruiz Diego , Jacobson Matthew P. , Dharia Neekesh V. , Su Angela , Robichaud Amanda L. , Saur Conway Amy , Tarlock Katherine , Stieglitz Elliot , Place Andrew E. , Puissant Alexandre , Hunger Stephen P. , Kim Annette S. , Lindeman Neal I. , Gore Lia , Janeway Katherine A. , Silverman Lewis B. , Tyner Jeffrey W. , Harris Marian H. , Loh Mignon L. , Stegmaier Kimberly
Published: April 2023

Patient sequencing data, by patient number and diagnosis.
Supplementary Data from Endogenous Retroelement Activation by Epigenetic Therapy Reverses the Warburg Effect and Elicits Mitochondrial-Mediated Cancer Cell Death
Authors: Fresquet Vicente , Garcia-Barchino Maria J. , Larrayoz Marta , Celay Jon , Vicente Carmen , Fernandez-Galilea Marta , Larrayoz Maria J. , Calasanz Maria J. , Panizo Carlos , Junza Alexandra , Han Jiahuai , Prior Celia , Fortes Puri , Pio Ruben , Oyarzabal Julen , Martinez-Baztan Alvaro , Paiva Bruno , Moreno-Aliaga Maria J. , Odero Maria D. , Agirre Xabier , Yanes Oscar , Prosper Felipe , Martinez-Climent Jose A.
Published: April 2023

Resources Table and Suppl. Tables. S1-S3
Supplementary Table from The Pediatric Precision Oncology INFORM Registry: Clinical Outcome and Benefit for Patients with Very High-Evidence Targets
Authors: van Tilburg Cornelis M. , Pfaff Elke , Pajtler Kristian W. , Langenberg Karin P.S. , Fiesel Petra , Jones Barbara C. , Balasubramanian Gnana Prakash , Stark Sebastian , Johann Pascal D. , Blattner-Johnson Mirjam , Schramm Kathrin , Dikow Nicola , Hirsch Steffen , Sutter Christian , Grund Kerstin , von Stackelberg Arend , Kulozik Andreas E. , Lissat Andrej , Borkhardt Arndt , Meisel Roland , Reinhardt Dirk , Klusmann Jan-Henning , Fleischhack Gudrun , Tippelt Stephan , von Schweinitz Dietrich , Schmid Irene , Kramm Christof M. , von Bueren André O. , Calaminus Gabriele , Vorwerk Peter , Graf Norbert , Westermann Frank , Fischer Matthias , Eggert Angelika , Burkhardt Birgit , Wößmann Wilhelm , Nathrath Michaela , Hecker-Nolting Stefanie , Frühwald Michael C. , Schneider Dominik T. , Brecht Ines B. , Ketteler Petra , Fulda Simone , Koscielniak Ewa , Meister Michael T. , Scheer Monika , Hettmer Simone , Schwab Matthias , Tremmel Roman , Øra Ingrid , Hutter Caroline , Gerber Nicolas U. , Lohi Olli , Kazanowska Bernarda , Kattamis Antonis , Filippidou Maria , Goemans Bianca , Zwaan C. Michel , Milde Till , Jäger Natalie , Wolf Stephan , Reuss David , Sahm Felix , von Deimling Andreas , Dirksen Uta , Freitag Angelika , Witt Ruth , Lichter Peter , Kopp-Schneider Annette , Jones David T.W. , Molenaar Jan J. , Capper David , Pfister Stefan M. , Witt Olaf
Published: April 2023

Supplementary Table from The Pediatric Precision Oncology INFORM Registry: Clinical Outcome and Benefit for Patients with Very High-Evidence Targets
Supplementary Data from Venetoclax and Navitoclax in Combination with Chemotherapy in Patients with Relapsed or Refractory Acute Lymphoblastic Leukemia and Lymphoblastic Lymphoma
Authors: Pullarkat Vinod A. , Lacayo Norman J. , Jabbour Elias , Rubnitz Jeffrey E. , Bajel Ashish , Laetsch Theodore W. , Leonard Jessica , Colace Susan I. , Khaw Seong Lin , Fleming Shaun A. , Mattison Ryan J. , Norris Robin , Opferman Joseph T. , Roberts Kathryn G. , Zhao Yaqi , Qu Chunxu , Badawi Mohamed , Schmidt Michelle , Tong Bo , Pesko John C. , Sun Yan , Ross Jeremy A. , Vishwamitra Deeksha , Rosenwinkel Lindsey , Kim Su Young , Jacobson Amanda , Mullighan Charles G. , Alexander Thomas B. , Stock Wendy
Published: April 2023

Supplementary Data
Supplementary Table 1 from A Humanized Animal Model Predicts Clonal Evolution and Therapeutic Vulnerabilities in Myeloproliferative Neoplasms
Authors: Celik Hamza , Krug Ethan , Zhang Christine R. , Han Wentao , Issa Nancy , Koh Won Kyun , Bjeije Hassan , Kukhar Ostap , Allen Maggie , Li Tiandao , Fisher Daniel A.C. , Fowles Jared S. , Wong Terrence N. , Stubbs Matthew C. , Koblish Holly K. , Oh Stephen T. , Challen Grant A.
Published: April 2023

Hematological comparison of MF patients versus PDXs
Supplementary Video 5 from Exploiting Allosteric Properties of RAF and MEK Inhibitors to Target Therapy-Resistant Tumors Driven by Oncogenic BRAF Signaling
Authors: Adamopoulos Christos , Ahmed Tamer A. , Tucker Maxwell R. , Ung Peter M.U. , Xiao Min , Karoulia Zoi , Amabile Angelo , Wu Xuewei , Aaronson Stuart A. , Ang Celina , Rebecca Vito W. , Brown Brian D. , Schlessinger Avner , Herlyn Meenhard , Wang Qi , Shaw David E. , Poulikakos Poulikos I.
Published: April 2023

Supplementary Video 5
Supplementary Tables from Exploiting Allosteric Properties of RAF and MEK Inhibitors to Target Therapy-Resistant Tumors Driven by Oncogenic BRAF Signaling
Authors: Adamopoulos Christos , Ahmed Tamer A. , Tucker Maxwell R. , Ung Peter M.U. , Xiao Min , Karoulia Zoi , Amabile Angelo , Wu Xuewei , Aaronson Stuart A. , Ang Celina , Rebecca Vito W. , Brown Brian D. , Schlessinger Avner , Herlyn Meenhard , Wang Qi , Shaw David E. , Poulikakos Poulikos I.
Published: April 2023

Supplementary Tables
Supplementary Data from Mobocertinib (TAK-788): A Targeted Inhibitor of EGFR Exon 20 Insertion Mutants in Non–Small Cell Lung Cancer
Authors: Gonzalvez Francois , Vincent Sylvie , Baker Theresa E. , Gould Alexandra E. , Li Shuai , Wardwell Scott D. , Nadworny Sara , Ning Yaoyu , Zhang Sen , Huang Wei-Sheng , Hu Yongbo , Li Feng , Greenfield Matthew T. , Zech Stephan G. , Das Biplab , Narasimhan Narayana I. , Clackson Tim , Dalgarno David , Shakespeare William C. , Fitzgerald Michael , Chouitar Johara , Griffin Robert J. , Liu Shengwu , Wong Kwok-kin , Zhu Xiaotian , Rivera Victor M.
Published: April 2023

Supplementary Tables (S1-6) and Figures (S1-6)
Supplementary Figure S9 from Resistance to Durvalumab and Durvalumab plus Tremelimumab Is Associated with Functional STK11 Mutations in Patients with Non–Small Cell Lung Cancer and Is Reversed by STAT3 Knockdown
Authors: Pore Nabendu , Wu Song , Standifer Nathan , Jure-Kunkel Maria , de los Reyes Melissa , Shrestha Yashaswi , Halpin Rebecca , Rothstein Raymond , Mulgrew Kathy , Blackmore Stephen , Martin Philip , Meekin John , Griffin Matthew , Bisha Ina , Proia Theresa A. , Miragaia Ricardo J. , Herbst Ronald , Gupta Ashok , Abdullah Shaad E. , Raja Rajiv , Frigault Melanie M. , Barrett J. Carl , Dennis Phillip A. , Ascierto Maria Libera , Oberst Michael D.
Published: April 2023

CPI efficacy in EMT6 STK11wt, KO, and KO/KI tumors. (A) Western blotting of STK11, phosphorylated AMPK (p-AMPK), total AMPK, and actin in lysates from wild-type EMT6 cells (EMT6 WT), STK11 CRISPR KO clone (EMT6 KO) and from STK11 KO clone engineered to re-express STK11 (EMT6 STK11 KO/KI). The ratio of phosphorylated AMPK to total AMPK (p-AMPK/total AMPK) is shown at bottom. (B) Percentage of Ly6G+ granulocytic cells among CD45+ immune cells from EMT6 WT and EMT6 STK11 KO tumors determined by flow cytometry. Survival of mice engrafted with (C) EMT6 WT, (D) EMT6 STK11 KO clone or (E) EMT6 STK11 KO clone engineered to re-express STK11 (EMT6 STK11 KO/KI) and treated with combined CPI therapy. Survival of mice engrafted with (F) EMT6 WT or (G) EMT6 STK11 KO clone 26C43 and treated with STAT3 ASO, CPI immunotherapy, or STAT3 ASO plus CPI combinations as indicated.
Supplementary Figure S1 from Resistance to Durvalumab and Durvalumab plus Tremelimumab Is Associated with Functional STK11 Mutations in Patients with Non–Small Cell Lung Cancer and Is Reversed by STAT3 Knockdown
Authors: Pore Nabendu , Wu Song , Standifer Nathan , Jure-Kunkel Maria , de los Reyes Melissa , Shrestha Yashaswi , Halpin Rebecca , Rothstein Raymond , Mulgrew Kathy , Blackmore Stephen , Martin Philip , Meekin John , Griffin Matthew , Bisha Ina , Proia Theresa A. , Miragaia Ricardo J. , Herbst Ronald , Gupta Ashok , Abdullah Shaad E. , Raja Rajiv , Frigault Melanie M. , Barrett J. Carl , Dennis Phillip A. , Ascierto Maria Libera , Oberst Michael D.
Published: April 2023

Association between STK11 and KRAS mutation and immunotherapy response. In STK11mut/KRASmut NSCLC, poor response to durvalumab (A) and durvalumab + tremelimumab (B) is mainly driven by STK11 mutation
Supplementary Table 2 from CRISPR Screening of CAR T Cells and Cancer Stem Cells Reveals Critical Dependencies for Cell-Based Therapies
Authors: Wang Dongrui , Prager Briana C. , Gimple Ryan C. , Aguilar Brenda , Alizadeh Darya , Tang Hongzhen , Lv Deguan , Starr Renate , Brito Alfonso , Wu Qiulian , Kim Leo J.Y. , Qiu Zhixin , Lin Peng , Lorenzini Michael H. , Badie Behnam , Forman Stephen J. , Xie Qi , Brown Christine E. , Rich Jeremy N.
Published: April 2023

CAR T cell targets from CRISPR screening that are shared between two donors
Supplementary Tables from Implementing a Functional Precision Medicine Tumor Board for Acute Myeloid Leukemia
Authors: Malani Disha , Kumar Ashwini , Brück Oscar , Kontro Mika , Yadav Bhagwan , Hellesøy Monica , Kuusanmäki Heikki , Dufva Olli , Kankainen Matti , Eldfors Samuli , Potdar Swapnil , Saarela Jani , Turunen Laura , Parsons Alun , Västrik Imre , Kivinen Katja , Saarela Janna , Räty Riikka , Lehto Minna , Wolf Maija , Gjertsen Bjorn Tore , Mustjoki Satu , Aittokallio Tero , Wennerberg Krister , Heckman Caroline A. , Kallioniemi Olli , Porkka Kimmo
Published: April 2023

11 supplement tables
Figure S6 from ZFTA Translocations Constitute Ependymoma Chromatin Remodeling and Transcription Factors
Authors: Kupp Robert , Ruff Lisa , Terranova Sabrina , Nathan Erica , Ballereau Stephane , Stark Rory , Sekhar Reddy Chilamakuri Chandra , Hoffmann Nadin , Wickham-Rahrmann Katherine , Widdess Marcus , Arabzade Amir , Zhao Yanhua , Varadharajan Srinidhi , Zheng Tuyu , Murugesan Mohankumar , Pfister Stefan M. , Kawauchi Daisuke , Pajtler Kristian W. , Deneen Benjamin , Mack Stephen C. , Masih Katherine E. , Gryder Berkley E. , Khan Javed , Gilbertson Richard J.
Published: April 2023

ZFTA-YAP1 interactome
Figure S4 from ZFTA Translocations Constitute Ependymoma Chromatin Remodeling and Transcription Factors
Authors: Kupp Robert , Ruff Lisa , Terranova Sabrina , Nathan Erica , Ballereau Stephane , Stark Rory , Sekhar Reddy Chilamakuri Chandra , Hoffmann Nadin , Wickham-Rahrmann Katherine , Widdess Marcus , Arabzade Amir , Zhao Yanhua , Varadharajan Srinidhi , Zheng Tuyu , Murugesan Mohankumar , Pfister Stefan M. , Kawauchi Daisuke , Pajtler Kristian W. , Deneen Benjamin , Mack Stephen C. , Masih Katherine E. , Gryder Berkley E. , Khan Javed , Gilbertson Richard J.
Published: April 2023

ZFTA-RELAFUS1 chromatin binding and remodelling
Supplementary Data from A Summary of the Inaugural WHO Classification of Pediatric Tumors: Transitioning from the Optical into the Molecular Era
Authors: Pfister Stefan M. , Reyes-Múgica Miguel , Chan John K.C. , Hasle Henrik , Lazar Alexander J. , Rossi Sabrina , Ferrari Andrea , Jarzembowski Jason A. , Pritchard-Jones Kathy , Hill D. Ashley , Jacques Thomas S. , Wesseling Pieter , López Terrada Dolores H. , von Deimling Andreas , Kratz Christian P. , Cree Ian A. , Alaggio Rita
Published: April 2023

Supplementary Data from A Summary of the Inaugural WHO Classification of Pediatric Tumors: Transitioning from the Optical into the Molecular Era
Figure S3 from ZFTA Translocations Constitute Ependymoma Chromatin Remodeling and Transcription Factors
Authors: Kupp Robert , Ruff Lisa , Terranova Sabrina , Nathan Erica , Ballereau Stephane , Stark Rory , Sekhar Reddy Chilamakuri Chandra , Hoffmann Nadin , Wickham-Rahrmann Katherine , Widdess Marcus , Arabzade Amir , Zhao Yanhua , Varadharajan Srinidhi , Zheng Tuyu , Murugesan Mohankumar , Pfister Stefan M. , Kawauchi Daisuke , Pajtler Kristian W. , Deneen Benjamin , Mack Stephen C. , Masih Katherine E. , Gryder Berkley E. , Khan Javed , Gilbertson Richard J.
Published: April 2023

ZFTA-RELAFUS1, ZFTA-RELAFUS2 and ZFTA-YAP1FUS upregulate a human ST-EP-ZFTAFUS specific transcriptome in HEK3 cells and mNSCs
Figure S1 from ZFTA Translocations Constitute Ependymoma Chromatin Remodeling and Transcription Factors
Authors: Kupp Robert , Ruff Lisa , Terranova Sabrina , Nathan Erica , Ballereau Stephane , Stark Rory , Sekhar Reddy Chilamakuri Chandra , Hoffmann Nadin , Wickham-Rahrmann Katherine , Widdess Marcus , Arabzade Amir , Zhao Yanhua , Varadharajan Srinidhi , Zheng Tuyu , Murugesan Mohankumar , Pfister Stefan M. , Kawauchi Daisuke , Pajtler Kristian W. , Deneen Benjamin , Mack Stephen C. , Masih Katherine E. , Gryder Berkley E. , Khan Javed , Gilbertson Richard J.
Published: April 2023

Domain mapping of ZFTA-RELAFUS1 and ZFTA-YAP1FUS driven nuclear translocation in mNSCs
Table S2 from Cholesterol Auxotrophy as a Targetable Vulnerability in Clear Cell Renal Cell Carcinoma
Authors: Riscal Romain , Bull Caroline J. , Mesaros Clementina , Finan Jennifer M. , Carens Madeleine , Ho Elaine S. , Xu Jimmy P. , Godfrey Jason , Brennan Paul , Johansson Mattias , Purdue Mark P. , Chanock Stephen J. , Mariosa Daniela , Timpson Nicholas J. , Vincent Emma E. , Keith Brian , Blair Ian A. , Skuli Nicolas , Simon M. Celeste
Published: April 2023

Beta change in circulating metabolite per 1 log odds of RCC
Table S1 from Cholesterol Auxotrophy as a Targetable Vulnerability in Clear Cell Renal Cell Carcinoma
Authors: Riscal Romain , Bull Caroline J. , Mesaros Clementina , Finan Jennifer M. , Carens Madeleine , Ho Elaine S. , Xu Jimmy P. , Godfrey Jason , Brennan Paul , Johansson Mattias , Purdue Mark P. , Chanock Stephen J. , Mariosa Daniela , Timpson Nicholas J. , Vincent Emma E. , Keith Brian , Blair Ian A. , Skuli Nicolas , Simon M. Celeste
Published: April 2023

LogOR RCC per SD circulating metabolite
Supplementary Figure 5 from A CRISPR/Cas9-Engineered ARID1A-Deficient Human Gastric Cancer Organoid Model Reveals Essential and Nonessential Modes of Oncogenic Transformation
Authors: Lo Yuan-Hung , Kolahi Kevin S. , Du Yuhong , Chang Chiung-Ying , Krokhotin Andrey , Nair Ajay , Sobba Walter D. , Karlsson Kasper , Jones Sunny J. , Longacre Teri A. , Mah Amanda T. , Tercan Bahar , Sockell Alexandra , Xu Hang , Seoane Jose A. , Chen Jin , Shmulevich Ilya , Weissman Jonathan S. , Curtis Christina , Califano Andrea , Fu Haian , Crabtree Gerald R. , Kuo Calvin J.
Published: April 2023

Supplementary Figure 5
Figure S5 from Cholesterol Auxotrophy as a Targetable Vulnerability in Clear Cell Renal Cell Carcinoma
Authors: Riscal Romain , Bull Caroline J. , Mesaros Clementina , Finan Jennifer M. , Carens Madeleine , Ho Elaine S. , Xu Jimmy P. , Godfrey Jason , Brennan Paul , Johansson Mattias , Purdue Mark P. , Chanock Stephen J. , Mariosa Daniela , Timpson Nicholas J. , Vincent Emma E. , Keith Brian , Blair Ian A. , Skuli Nicolas , Simon M. Celeste
Published: April 2023

Figure S5 shows that targeting SCARB1 promotes ccRCC cell death in vitro and in vivo, related to Figure 4.
Figure S4 from Cholesterol Auxotrophy as a Targetable Vulnerability in Clear Cell Renal Cell Carcinoma
Authors: Riscal Romain , Bull Caroline J. , Mesaros Clementina , Finan Jennifer M. , Carens Madeleine , Ho Elaine S. , Xu Jimmy P. , Godfrey Jason , Brennan Paul , Johansson Mattias , Purdue Mark P. , Chanock Stephen J. , Mariosa Daniela , Timpson Nicholas J. , Vincent Emma E. , Keith Brian , Blair Ian A. , Skuli Nicolas , Simon M. Celeste
Published: April 2023

Figure S4 shows the high expression of SCARB1 specific to ccRCC tumors, related to Figure 3. Shows also SCARB1 knock down in normal kidney cell lines, related to Figure 4.
Figure S3 from Cholesterol Auxotrophy as a Targetable Vulnerability in Clear Cell Renal Cell Carcinoma
Authors: Riscal Romain , Bull Caroline J. , Mesaros Clementina , Finan Jennifer M. , Carens Madeleine , Ho Elaine S. , Xu Jimmy P. , Godfrey Jason , Brennan Paul , Johansson Mattias , Purdue Mark P. , Chanock Stephen J. , Mariosa Daniela , Timpson Nicholas J. , Vincent Emma E. , Keith Brian , Blair Ian A. , Skuli Nicolas , Simon M. Celeste
Published: April 2023

Figure S3 shows elevated HDL associated metabolites in RCC. Shows also tumor weight and HDL levels of mice fed with cholesterol diet, related to Figure 2.
Supplementary Figure 1 from A CRISPR/Cas9-Engineered ARID1A-Deficient Human Gastric Cancer Organoid Model Reveals Essential and Nonessential Modes of Oncogenic Transformation
Authors: Lo Yuan-Hung , Kolahi Kevin S. , Du Yuhong , Chang Chiung-Ying , Krokhotin Andrey , Nair Ajay , Sobba Walter D. , Karlsson Kasper , Jones Sunny J. , Longacre Teri A. , Mah Amanda T. , Tercan Bahar , Sockell Alexandra , Xu Hang , Seoane Jose A. , Chen Jin , Shmulevich Ilya , Weissman Jonathan S. , Curtis Christina , Califano Andrea , Fu Haian , Crabtree Gerald R. , Kuo Calvin J.
Published: April 2023

Supplementary Figure 1
Figure S1 from Cholesterol Auxotrophy as a Targetable Vulnerability in Clear Cell Renal Cell Carcinoma
Authors: Riscal Romain , Bull Caroline J. , Mesaros Clementina , Finan Jennifer M. , Carens Madeleine , Ho Elaine S. , Xu Jimmy P. , Godfrey Jason , Brennan Paul , Johansson Mattias , Purdue Mark P. , Chanock Stephen J. , Mariosa Daniela , Timpson Nicholas J. , Vincent Emma E. , Keith Brian , Blair Ian A. , Skuli Nicolas , Simon M. Celeste
Published: April 2023

Figure S1 shows that intracellular cholesterol metabolism is deregulated in ccRCC tumor cells, related to Figure 1.
Supp Table 3 from Tumor Microenvironment–Derived R-spondins Enhance Antitumor Immunity to Suppress Tumor Growth and Sensitize for Immune Checkpoint Blockade Therapy
Authors: Tang Yuting , Xu Qian , Hu Liang , Yan Xiaomei , Feng Xiaomin , Yokota Asumi , Wang Weinan , Zhan Di , Krishnamurthy Durga , Ochayon David E. , Wen Lijun , Huo Li , Zeng Huimin , Luo Yingwan , Huang L. Frank , Wunderlich Mark , Zhang Jiwang , Vivier Eric , Zhou Jianfeng , Waggoner Stephen N. , Huang Gang
Published: April 2023

qPCR primers
Supp Table 2 from Tumor Microenvironment–Derived R-spondins Enhance Antitumor Immunity to Suppress Tumor Growth and Sensitize for Immune Checkpoint Blockade Therapy
Authors: Tang Yuting , Xu Qian , Hu Liang , Yan Xiaomei , Feng Xiaomin , Yokota Asumi , Wang Weinan , Zhan Di , Krishnamurthy Durga , Ochayon David E. , Wen Lijun , Huo Li , Zeng Huimin , Luo Yingwan , Huang L. Frank , Wunderlich Mark , Zhang Jiwang , Vivier Eric , Zhou Jianfeng , Waggoner Stephen N. , Huang Gang
Published: April 2023

Differentially expressed genes between NK cells with and without Myc deficiency
Supplementary Data from MNK Inhibition Sensitizes KRAS-Mutant Colorectal Cancer to mTORC1 Inhibition by Reducing eIF4E Phosphorylation and c-MYC Expression
Authors: Knight John R.P. , Alexandrou Constantinos , Skalka George L. , Vlahov Nikola , Pennel Kathryn , Officer Leah , Teodosio Ana , Kanellos Georgios , Gay David M. , May-Wilson Sebastian , Smith Ewan M. , Najumudeen Arafath K. , Gilroy Kathryn , Ridgway Rachel A. , Flanagan Dustin J. , Smith Rachael C.L. , McDonald Laura , MacKay Craig , Cheasty Anne , McArthur Kerri , Stanway Emma , Leach Joshua D. , Jackstadt Rene , Waldron Joseph A. , Campbell Andrew D. , Vlachogiannis Georgios , Valeri Nicola , Haigis Kevin M. , Sonenberg Nahum , Proud Christopher G. , Jones Neil P. , Swarbrick Martin E. , McKinnon Heather J. , Faller William J. , Le Quesne John , Edwards Joanne , Willis Anne E. , Bushell Martin , Sansom Owen J.
Published: April 2023

All supplemental figures and legends
Supplementary Table from Low-Dose Radiotherapy Reverses Tumor Immune Desertification and Resistance to Immunotherapy
Authors: Herrera Fernanda G. , Ronet Catherine , Ochoa de Olza Maria , Barras David , Crespo Isaac , Andreatta Massimo , Corria-Osorio Jesus , Spill Aodrenn , Benedetti Fabrizio , Genolet Raphael , Orcurto Angela , Imbimbo Martina , Ghisoni Eleonora , Navarro Rodrigo Blanca , Berthold Dominik R. , Sarivalasis Apostolos , Zaman Khalil , Duran Rafael , Dromain Clarisse , Prior John , Schaefer Niklaus , Bourhis Jean , Dimopoulou Georgia , Tsourti Zoi , Messemaker Marius , Smith Thomas , Warren Sarah E. , Foukas Periklis , Rusakiewicz Sylvie , Pittet Mikaël J. , Zimmermann Stefan , Sempoux Christine , Dafni Urania , Harari Alexandre , Kandalaft Lana E. , Carmona Santiago J. , Dangaj Laniti Denarda , Irving Melita , Coukos George
Published: April 2023

Supplementary Table from Low-Dose Radiotherapy Reverses Tumor Immune Desertification and Resistance to Immunotherapy
Supplementary Figure from Low-Dose Radiotherapy Reverses Tumor Immune Desertification and Resistance to Immunotherapy
Authors: Herrera Fernanda G. , Ronet Catherine , Ochoa de Olza Maria , Barras David , Crespo Isaac , Andreatta Massimo , Corria-Osorio Jesus , Spill Aodrenn , Benedetti Fabrizio , Genolet Raphael , Orcurto Angela , Imbimbo Martina , Ghisoni Eleonora , Navarro Rodrigo Blanca , Berthold Dominik R. , Sarivalasis Apostolos , Zaman Khalil , Duran Rafael , Dromain Clarisse , Prior John , Schaefer Niklaus , Bourhis Jean , Dimopoulou Georgia , Tsourti Zoi , Messemaker Marius , Smith Thomas , Warren Sarah E. , Foukas Periklis , Rusakiewicz Sylvie , Pittet Mikaël J. , Zimmermann Stefan , Sempoux Christine , Dafni Urania , Harari Alexandre , Kandalaft Lana E. , Carmona Santiago J. , Dangaj Laniti Denarda , Irving Melita , Coukos George
Published: April 2023

Supplementary Figure from Low-Dose Radiotherapy Reverses Tumor Immune Desertification and Resistance to Immunotherapy
Supplementary Data from Direct and Indirect Regulators of Epithelial–Mesenchymal Transition–Mediated Immunosuppression in Breast Carcinomas
Authors: Dongre Anushka , Rashidian Mohammad , Eaton Elinor Ng , Reinhardt Ferenc , Thiru Prathapan , Zagorulya Maria , Nepal Sunita , Banaz Tuba , Martner Anna , Spranger Stefani , Weinberg Robert A.
Published: April 2023

This file contains Supplementary Figures 1-8 and Supplementary Tables #1-2
Supplementary Table S7 from PRC2 Inhibitors Overcome Glucocorticoid Resistance Driven by NSD2 Mutation in Pediatric Acute Lymphoblastic Leukemia
Authors: Li Jianping , Hlavka-Zhang Julia , Shrimp Jonathan H. , Piper Crissandra , Dupéré-Richér Daphne , Roth Jacob S. , Jing Duohui , Casellas Román Heidi L. , Troche Catalina , Swaroop Alok , Kulis Marta , Oyer Jon A. , Will Christine M. , Shen Min , Riva Alberto , Bennett Richard L. , Ferrando Adolfo A. , Hall Matthew D. , Lock Richard B. , Licht Jonathan D.
Published: April 2023

Primers
Supplementary Figures S1 - S5 from Rlf–Mycl Gene Fusion Drives Tumorigenesis and Metastasis in a Mouse Model of Small Cell Lung Cancer
Authors: Ciampricotti Metamia , Karakousi Triantafyllia , Richards Allison L. , Quintanal-Villalonga Àlvaro , Karatza Angeliki , Caeser Rebecca , Costa Emily A. , Allaj Viola , Manoj Parvathy , Spainhower Kyle B. , Kombak Faruk E. , Sanchez-Rivera Francisco J. , Jaspers Janneke E. , Zavitsanou Anastasia-Maria , Maddalo Danilo , Ventura Andrea , Rideout William M. , Akama-Garren Elliot H. , Jacks Tyler , Donoghue Mark T.A. , Sen Triparna , Oliver Trudy G. , Poirier John T. , Papagiannakopoulos Thales , Rudin Charles M.
Published: April 2023

Supplementary Figures S1 - S5
Supplementary Tables from Mitochondrial Fragmentation Triggers Ineffective Hematopoiesis in Myelodysplastic Syndromes
Authors: Aoyagi Yasushige , Hayashi Yoshihiro , Harada Yuka , Choi Kwangmin , Matsunuma Natsumi , Sadato Daichi , Maemoto Yuki , Ito Akihiro , Yanagi Shigeru , Starczynowski Daniel T. , Harada Hironori
Published: April 2023

Table S1-S11
Supplementary Figures from Mitochondrial Fragmentation Triggers Ineffective Hematopoiesis in Myelodysplastic Syndromes
Authors: Aoyagi Yasushige , Hayashi Yoshihiro , Harada Yuka , Choi Kwangmin , Matsunuma Natsumi , Sadato Daichi , Maemoto Yuki , Ito Akihiro , Yanagi Shigeru , Starczynowski Daniel T. , Harada Hironori
Published: April 2023

Figure S1-S22
Supplementary Methods and Figures from PRC2 Inhibitors Overcome Glucocorticoid Resistance Driven by NSD2 Mutation in Pediatric Acute Lymphoblastic Leukemia
Authors: Li Jianping , Hlavka-Zhang Julia , Shrimp Jonathan H. , Piper Crissandra , Dupéré-Richér Daphne , Roth Jacob S. , Jing Duohui , Casellas Román Heidi L. , Troche Catalina , Swaroop Alok , Kulis Marta , Oyer Jon A. , Will Christine M. , Shen Min , Riva Alberto , Bennett Richard L. , Ferrando Adolfo A. , Hall Matthew D. , Lock Richard B. , Licht Jonathan D.
Published: April 2023

Supplementary Methods and Figures
Supplementary Protocol from Efficacy, Safety, and Biomarker Analysis of Combined PD-L1 (Atezolizumab) and VEGF (Bevacizumab) Blockade in Advanced Malignant Peritoneal Mesothelioma
Authors: Raghav Kanwal , Liu Suyu , Overman Michael J. , Willett Anneleis F. , Knafl Mark , Fu Szu-Chin , Malpica Anais , Prasad Seema , Royal Richard E. , Scally Christopher P. , Mansfield Paul F. , Wistuba Ignacio I. , Futreal Andrew P. , Maru Dipen M. , Solis Soto Luisa M. , Parra Cuentas Edwin R. , Chen Honglei , Villalobos Pamela , Verma Anuj , Mahvash Armeen , Hwu Patrick , Cortazar Patricia , McKenna Edward , Yun Cindy , Dervin Shannon , Schulze Katja , Darbonne Walter C. , Morani Ajaykumar C. , Kopetz Scott , Fournier Keith F. , Woodman Scott E. , Yao James C. , Varadhachary Gauri R. , Halperin Daniel M.
Published: April 2023

Study Protocol
Supplementary Figure S5 from Genomes for Kids: The Scope of Pathogenic Mutations in Pediatric Cancer Revealed by Comprehensive DNA and RNA Sequencing
Authors: Newman Scott , Nakitandwe Joy , Kesserwan Chimene A. , Azzato Elizabeth M. , Wheeler David A. , Rusch Michael , Shurtleff Sheila , Hedges Dale J. , Hamilton Kayla V. , Foy Scott G. , Edmonson Michael N. , Thrasher Andrew , Bahrami Armita , Orr Brent A. , Klco Jeffery M. , Gu Jiali , Harrison Lynn W. , Wang Lu , Clay Michael R. , Ouma Annastasia , Silkov Antonina , Liu Yanling , Zhang Zhaojie , Liu Yu , Brady Samuel W. , Zhou Xin , Chang Ti-Cheng , Pande Manjusha , Davis Eric , Becksfort Jared , Patel Aman , Wilkinson Mark R. , Rahbarinia Delaram , Kubal Manish , Maciaszek Jamie L. , Pastor Victor , Knight Jay , Gout Alexander M. , Wang Jian , Gu Zhaohui , Mullighan Charles G. , McGee Rose B. , Quinn Emily A. , Nuccio Regina , Mostafavi Roya , Gerhardt Elsie L. , Taylor Leslie M. , Valdez Jessica M. , Hines-Dowell Stacy J. , Pappo Alberto S. , Robinson Giles , Johnson Liza-Marie , Pui Ching-Hon , Ellison David W. , Downing James R. , Zhang Jinghui , Nichols Kim E.
Published: April 2023

Supplementary Figure S5
Supplementary Tables from Enhancer Hijacking Drives Oncogenic BCL11B Expression in Lineage-Ambiguous Stem Cell Leukemia
Authors: Montefiori Lindsey E. , Bendig Sonja , Gu Zhaohui , Chen Xiaolong , Pölönen Petri , Ma Xiaotu , Murison Alex , Zeng Andy , Garcia-Prat Laura , Dickerson Kirsten , Iacobucci Ilaria , Abdelhamed Sherif , Hiltenbrand Ryan , Mead Paul E. , Mehr Cyrus M. , Xu Beisi , Cheng Zhongshan , Chang Ti-Cheng , Westover Tamara , Ma Jing , Stengel Anna , Kimura Shunsuke , Qu Chunxu , Valentine Marcus B. , Rashkovan Marissa , Luger Selina , Litzow Mark R. , Rowe Jacob M. , den Boer Monique L. , Wang Victoria , Yin Jun , Kornblau Steven M. , Hunger Stephen P. , Loh Mignon L. , Pui Ching-Hon , Yang Wenjian , Crews Kristine R. , Roberts Kathryn G. , Yang Jun J. , Relling Mary V. , Evans William E. , Stock Wendy , Paietta Elisabeth M. , Ferrando Adolfo A. , Zhang Jinghui , Kern Wolfgang , Haferlach Torsten , Wu Gang , Dick John E. , Klco Jeffery M. , Haferlach Claudia , Mullighan Charles G.
Published: April 2023

This file contains Supplementary Tables 1-15 detailing clinical and genomic information about each patient analyzed in this study, along with the results of RNA-seq and gene set enrichment analyses.
Supplementary Figures, and Supplementary Table Legends from Enhancer Hijacking Drives Oncogenic BCL11B Expression in Lineage-Ambiguous Stem Cell Leukemia
Authors: Montefiori Lindsey E. , Bendig Sonja , Gu Zhaohui , Chen Xiaolong , Pölönen Petri , Ma Xiaotu , Murison Alex , Zeng Andy , Garcia-Prat Laura , Dickerson Kirsten , Iacobucci Ilaria , Abdelhamed Sherif , Hiltenbrand Ryan , Mead Paul E. , Mehr Cyrus M. , Xu Beisi , Cheng Zhongshan , Chang Ti-Cheng , Westover Tamara , Ma Jing , Stengel Anna , Kimura Shunsuke , Qu Chunxu , Valentine Marcus B. , Rashkovan Marissa , Luger Selina , Litzow Mark R. , Rowe Jacob M. , den Boer Monique L. , Wang Victoria , Yin Jun , Kornblau Steven M. , Hunger Stephen P. , Loh Mignon L. , Pui Ching-Hon , Yang Wenjian , Crews Kristine R. , Roberts Kathryn G. , Yang Jun J. , Relling Mary V. , Evans William E. , Stock Wendy , Paietta Elisabeth M. , Ferrando Adolfo A. , Zhang Jinghui , Kern Wolfgang , Haferlach Torsten , Wu Gang , Dick John E. , Klco Jeffery M. , Haferlach Claudia , Mullighan Charles G.
Published: April 2023

This file contains Supplementary Figures 1-23 with corresponding supplementary figure legends, as well as the legends for Supplementary Tables 1-15.
Supplementary Figure S2 from Genomes for Kids: The Scope of Pathogenic Mutations in Pediatric Cancer Revealed by Comprehensive DNA and RNA Sequencing
Authors: Newman Scott , Nakitandwe Joy , Kesserwan Chimene A. , Azzato Elizabeth M. , Wheeler David A. , Rusch Michael , Shurtleff Sheila , Hedges Dale J. , Hamilton Kayla V. , Foy Scott G. , Edmonson Michael N. , Thrasher Andrew , Bahrami Armita , Orr Brent A. , Klco Jeffery M. , Gu Jiali , Harrison Lynn W. , Wang Lu , Clay Michael R. , Ouma Annastasia , Silkov Antonina , Liu Yanling , Zhang Zhaojie , Liu Yu , Brady Samuel W. , Zhou Xin , Chang Ti-Cheng , Pande Manjusha , Davis Eric , Becksfort Jared , Patel Aman , Wilkinson Mark R. , Rahbarinia Delaram , Kubal Manish , Maciaszek Jamie L. , Pastor Victor , Knight Jay , Gout Alexander M. , Wang Jian , Gu Zhaohui , Mullighan Charles G. , McGee Rose B. , Quinn Emily A. , Nuccio Regina , Mostafavi Roya , Gerhardt Elsie L. , Taylor Leslie M. , Valdez Jessica M. , Hines-Dowell Stacy J. , Pappo Alberto S. , Robinson Giles , Johnson Liza-Marie , Pui Ching-Hon , Ellison David W. , Downing James R. , Zhang Jinghui , Nichols Kim E.
Published: April 2023

Supplementary Figure S2
Supplementary Tables from Clinical and Biological Subtypes of B-cell Lymphoma Revealed by Microenvironmental Signatures
Authors: Kotlov Nikita , Bagaev Alexander , Revuelta Maria V. , Phillip Jude M. , Cacciapuoti Maria Teresa , Antysheva Zoya , Svekolkin Viktor , Tikhonova Ekaterina , Miheecheva Natalia , Kuzkina Natalia , Nos Grigorii , Tabbo Fabrizio , Frenkel Felix , Ghione Paola , Tsiper Maria , Almog Nava , Fowler Nathan , Melnick Ari M. , Leonard John P. , Inghirami Giorgio , Cerchietti Leandro
Published: April 2023

Supplementary Tables
Supplementary Table S1 from Genetic Determinants of EGFR-Driven Lung Cancer Growth and Therapeutic Response In Vivo
Authors: Foggetti Giorgia , Li Chuan , Cai Hongchen , Hellyer Jessica A. , Lin Wen-Yang , Ayeni Deborah , Hastings Katherine , Choi Jungmin , Wurtz Anna , Andrejka Laura , Maghini Dylan G. , Rashleigh Nicholas , Levy Stellar , Homer Robert , Gettinger Scott N. , Diehn Maximilian , Wakelee Heather A. , Petrov Dmitri A. , Winslow Monte M. , Politi Katerina
Published: April 2023

Supplementary Table
Supplementary Figures S8-S10 from Genetic Determinants of EGFR-Driven Lung Cancer Growth and Therapeutic Response In Vivo
Authors: Foggetti Giorgia , Li Chuan , Cai Hongchen , Hellyer Jessica A. , Lin Wen-Yang , Ayeni Deborah , Hastings Katherine , Choi Jungmin , Wurtz Anna , Andrejka Laura , Maghini Dylan G. , Rashleigh Nicholas , Levy Stellar , Homer Robert , Gettinger Scott N. , Diehn Maximilian , Wakelee Heather A. , Petrov Dmitri A. , Winslow Monte M. , Politi Katerina
Published: April 2023

Supplementary Figures
Supplementary Table S1 to S8 from Identification and Therapeutic Targeting of GPR20, Selectively Expressed in Gastrointestinal Stromal Tumors, with DS-6157a, a First-in-Class Antibody–Drug Conjugate
Authors: Iida Kenji , Abdelhamid Ahmed Amr H. , Nagatsuma Akiko Kawano , Shibutani Tomoko , Yasuda Satoru , Kitamura Michiko , Hattori Chiharu , Abe Manabu , Hasegawa Jun , Iguchi Takuma , Karibe Tsuyoshi , Nakada Takashi , Inaki Koichiro , Kamei Reiko , Abe Yuki , Nomura Taisei , Andersen Jessica L. , Santagata Sandro , Hemming Matthew L. , George Suzanne , Doi Toshihiko , Ochiai Atsushi , Demetri George D. , Agatsuma Toshinori
Published: April 2023

Characteristics for GIST patient samples, GPR20 expression in KIT/PDGFRA wild type GIST, GPR20 expression in normal, malignant and sarcoma tissue microarrays.
Supplementary Figures S4-S7 from Genetic Determinants of EGFR-Driven Lung Cancer Growth and Therapeutic Response In Vivo
Authors: Foggetti Giorgia , Li Chuan , Cai Hongchen , Hellyer Jessica A. , Lin Wen-Yang , Ayeni Deborah , Hastings Katherine , Choi Jungmin , Wurtz Anna , Andrejka Laura , Maghini Dylan G. , Rashleigh Nicholas , Levy Stellar , Homer Robert , Gettinger Scott N. , Diehn Maximilian , Wakelee Heather A. , Petrov Dmitri A. , Winslow Monte M. , Politi Katerina
Published: April 2023

Supplementary Figures
Supplementary Figure S1 to S6 and Supplementary Materials and Methods from Identification and Therapeutic Targeting of GPR20, Selectively Expressed in Gastrointestinal Stromal Tumors, with DS-6157a, a First-in-Class Antibody–Drug Conjugate
Authors: Iida Kenji , Abdelhamid Ahmed Amr H. , Nagatsuma Akiko Kawano , Shibutani Tomoko , Yasuda Satoru , Kitamura Michiko , Hattori Chiharu , Abe Manabu , Hasegawa Jun , Iguchi Takuma , Karibe Tsuyoshi , Nakada Takashi , Inaki Koichiro , Kamei Reiko , Abe Yuki , Nomura Taisei , Andersen Jessica L. , Santagata Sandro , Hemming Matthew L. , George Suzanne , Doi Toshihiko , Ochiai Atsushi , Demetri George D. , Agatsuma Toshinori
Published: April 2023

S1: Expression of GPR20 in clinical GIST specimens from NCCHE S2: Representative images of GPR20 expression in various sarcoma including GIST in University of Basel derived TMA. S3: GPR20 was not expressed in systemic mastocytosis. S4: Protein expression of human, cynomolgus monkey, rat, and mouse GPR20 on CHO-K1 cells. S5: Lack of DS-6157a efficacy in the GPR20-negative KPL-4 xenograft model. S6: Comparison of tumor growth curve of GIST-T1 and GIST-T1/GPR20 xenograft models.
Supplementary Table 9 from Nongenetic Evolution Drives Lung Adenocarcinoma Spatial Heterogeneity and Progression
Authors: Tavernari Daniele , Battistello Elena , Dheilly Elie , Petruzzella Aaron S. , Mina Marco , Sordet-Dessimoz Jessica , Peters Solange , Krueger Thorsten , Gfeller David , Riggi Nicolo , Oricchio Elisa , Letovanec Igor , Ciriello Giovanni
Published: April 2023

Supplementary Table 9
Supplementary Figures S1-S3 from Genetic Determinants of EGFR-Driven Lung Cancer Growth and Therapeutic Response In Vivo
Authors: Foggetti Giorgia , Li Chuan , Cai Hongchen , Hellyer Jessica A. , Lin Wen-Yang , Ayeni Deborah , Hastings Katherine , Choi Jungmin , Wurtz Anna , Andrejka Laura , Maghini Dylan G. , Rashleigh Nicholas , Levy Stellar , Homer Robert , Gettinger Scott N. , Diehn Maximilian , Wakelee Heather A. , Petrov Dmitri A. , Winslow Monte M. , Politi Katerina
Published: April 2023

Supplementary Figures
Supplementary Table 8 from Nongenetic Evolution Drives Lung Adenocarcinoma Spatial Heterogeneity and Progression
Authors: Tavernari Daniele , Battistello Elena , Dheilly Elie , Petruzzella Aaron S. , Mina Marco , Sordet-Dessimoz Jessica , Peters Solange , Krueger Thorsten , Gfeller David , Riggi Nicolo , Oricchio Elisa , Letovanec Igor , Ciriello Giovanni
Published: April 2023

Supplementary Table 8
Supplementary Table 5 from Nongenetic Evolution Drives Lung Adenocarcinoma Spatial Heterogeneity and Progression
Authors: Tavernari Daniele , Battistello Elena , Dheilly Elie , Petruzzella Aaron S. , Mina Marco , Sordet-Dessimoz Jessica , Peters Solange , Krueger Thorsten , Gfeller David , Riggi Nicolo , Oricchio Elisa , Letovanec Igor , Ciriello Giovanni
Published: April 2023

Supplementary Table 5
Supplementary Table 3 from Nongenetic Evolution Drives Lung Adenocarcinoma Spatial Heterogeneity and Progression
Authors: Tavernari Daniele , Battistello Elena , Dheilly Elie , Petruzzella Aaron S. , Mina Marco , Sordet-Dessimoz Jessica , Peters Solange , Krueger Thorsten , Gfeller David , Riggi Nicolo , Oricchio Elisa , Letovanec Igor , Ciriello Giovanni
Published: April 2023

Supplementary Table 3
Supplementary Figure 5 from Nongenetic Evolution Drives Lung Adenocarcinoma Spatial Heterogeneity and Progression
Authors: Tavernari Daniele , Battistello Elena , Dheilly Elie , Petruzzella Aaron S. , Mina Marco , Sordet-Dessimoz Jessica , Peters Solange , Krueger Thorsten , Gfeller David , Riggi Nicolo , Oricchio Elisa , Letovanec Igor , Ciriello Giovanni
Published: April 2023

Supplementary Figure 5
Supplementary Data Index from NKX3.1 Localization to Mitochondria Suppresses Prostate Cancer Initiation
Authors: Papachristodoulou Alexandros , Rodriguez-Calero Antonio , Panja Sukanya , Margolskee Elizabeth , Virk Renu K. , Milner Teresa A. , Martina Luis Pina , Kim Jaime Y. , Di Bernardo Matteo , Williams Alanna B. , Maliza Elvis A. , Caputo Joseph M. , Haas Christopher , Wang Vinson , De Castro Guarionex Joel , Wenske Sven , Hibshoosh Hanina , McKiernan James M. , Shen Michael M. , Rubin Mark A. , Mitrofanova Antonina , Dutta Aditya , Abate-Shen Cory
Published: April 2023

List of all supplementary items included with the manuscript.
Supplementary Figure 4 from Nongenetic Evolution Drives Lung Adenocarcinoma Spatial Heterogeneity and Progression
Authors: Tavernari Daniele , Battistello Elena , Dheilly Elie , Petruzzella Aaron S. , Mina Marco , Sordet-Dessimoz Jessica , Peters Solange , Krueger Thorsten , Gfeller David , Riggi Nicolo , Oricchio Elisa , Letovanec Igor , Ciriello Giovanni
Published: April 2023

Supplementary Figure 4
Supplementary Figure 2 from Nongenetic Evolution Drives Lung Adenocarcinoma Spatial Heterogeneity and Progression
Authors: Tavernari Daniele , Battistello Elena , Dheilly Elie , Petruzzella Aaron S. , Mina Marco , Sordet-Dessimoz Jessica , Peters Solange , Krueger Thorsten , Gfeller David , Riggi Nicolo , Oricchio Elisa , Letovanec Igor , Ciriello Giovanni
Published: April 2023

Supplementary Figure 2
Supplementary Table from LKB1/STK11 Is a Tumor Suppressor in the Progression of Myeloproliferative Neoplasms
Authors: Marinaccio Christian , Suraneni Praveen , Celik Hamza , Volk Andrew , Wen Qiang Jeremy , Ling Te , Bulic Marinka , Lasho Terra , Koche Richard P. , Famulare Christopher A. , Farnoud Noushin , Stein Brady , Schieber Michael , Gurbuxani Sandeep , Root David E. , Younger Scott T. , Hoffman Ronald , Gangat Naseema , Ntziachristos Panagiotis , Chandel Navdeep S. , Levine Ross L. , Rampal Raajit K. , Challen Grant A. , Tefferi Ayalew , Crispino John D.
Published: April 2023

Supplementary Table from LKB1/STK11 Is a Tumor Suppressor in the Progression of Myeloproliferative Neoplasms
Supplementary Data from Functional Precision Medicine Provides Clinical Benefit in Advanced Aggressive Hematologic Cancers and Identifies Exceptional Responders
Authors: Kornauth Christoph , Pemovska Tea , Vladimer Gregory I. , Bayer Günther , Bergmann Michael , Eder Sandra , Eichner Ruth , Erl Martin , Esterbauer Harald , Exner Ruth , Felsleitner-Hauer Verena , Forte Maurizio , Gaiger Alexander , Geissler Klaus , Greinix Hildegard T. , Gstöttner Wolfgang , Hacker Marcus , Hartmann Bernd Lorenz , Hauswirth Alexander W. , Heinemann Tim , Heintel Daniel , Hoda Mir Alireza , Hopfinger Georg , Jaeger Ulrich , Kazianka Lukas , Kenner Lukas , Kiesewetter Barbara , Krall Nikolaus , Krajnik Gerhard , Kubicek Stefan , Le Trang , Lubowitzki Simone , Mayerhoefer Marius E. , Menschel Elisabeth , Merkel Olaf , Miura Katsuhiro , Müllauer Leonhard , Neumeister Peter , Noesslinger Thomas , Ocko Katharina , Öhler Leopold , Panny Michael , Pichler Alexander , Porpaczy Edit , Prager Gerald W. , Raderer Markus , Ristl Robin , Ruckser Reinhard , Salamon Julius , Schiefer Ana-Iris , Schmolke Ann-Sofie , Schwarzinger Ilse , Selzer Edgar , Sillaber Christian , Skrabs Cathrin , Sperr Wolfgang R. , Srndic Ismet , Thalhammer Renate , Valent Peter , van der Kouwe Emiel , Vanura Katrina , Vogt Stefan , Waldstein Cora , Wolf Dominik , Zielinski Christoph C. , Zojer Niklas , Simonitsch-Klupp Ingrid , Superti-Furga Giulio , Snijder Berend , Staber Philipp B.
Published: April 2023

Supplementary Data containing the statistical analysis plan, Supplemental Figures 1-6 and Supplemental Tables 1 and 2
Table S8 from Chemotherapy Induces Senescence-Like Resilient Cells Capable of Initiating AML Recurrence
Authors: Duy Cihangir , Li Meng , Teater Matt , Meydan Cem , Garrett-Bakelman Francine E. , Lee Tak C. , Chin Christopher R. , Durmaz Ceyda , Kawabata Kimihito C. , Dhimolea Eugen , Mitsiades Constantine S. , Doehner Hartmut , D'Andrea Richard J. , Becker Michael W. , Paietta Elisabeth M. , Mason Christopher E. , Carroll Martin , Melnick Ari M.
Published: April 2023

Published samples used for data analysis
SupplementaryTables S7-S16 from Fasting-Mimicking Diet Is Safe and Reshapes Metabolism and Antitumor Immunity in Patients with Cancer
Authors: Vernieri Claudio , Fucà Giovanni , Ligorio Francesca , Huber Veronica , Vingiani Andrea , Iannelli Fabio , Raimondi Alessandra , Rinchai Darawan , Frigè Gianmaria , Belfiore Antonino , Lalli Luca , Chiodoni Claudia , Cancila Valeria , Zanardi Federica , Ajazi Arta , Cortellino Salvatore , Vallacchi Viviana , Squarcina Paola , Cova Agata , Pesce Samantha , Frati Paola , Mall Raghvendra , Corsetto Paola Antonia , Rizzo Angela Maria , Ferraris Cristina , Folli Secondo , Garassino Marina Chiara , Capri Giuseppe , Bianchi Giulia , Colombo Mario Paolo , Minucci Saverio , Foiani Marco , Longo Valter Daniel , Apolone Giovanni , Torri Valter , Pruneri Giancarlo , Bedognetti Davide , Rivoltini Licia , de Braud Filippo
Published: April 2023

Supplementary Table S7-S16
Figure S1 - Figure S8 from Chemotherapy Induces Senescence-Like Resilient Cells Capable of Initiating AML Recurrence
Authors: Duy Cihangir , Li Meng , Teater Matt , Meydan Cem , Garrett-Bakelman Francine E. , Lee Tak C. , Chin Christopher R. , Durmaz Ceyda , Kawabata Kimihito C. , Dhimolea Eugen , Mitsiades Constantine S. , Doehner Hartmut , D'Andrea Richard J. , Becker Michael W. , Paietta Elisabeth M. , Mason Christopher E. , Carroll Martin , Melnick Ari M.
Published: April 2023

Supplemental Figures
Supplementary Figures from Fasting-Mimicking Diet Is Safe and Reshapes Metabolism and Antitumor Immunity in Patients with Cancer
Authors: Vernieri Claudio , Fucà Giovanni , Ligorio Francesca , Huber Veronica , Vingiani Andrea , Iannelli Fabio , Raimondi Alessandra , Rinchai Darawan , Frigè Gianmaria , Belfiore Antonino , Lalli Luca , Chiodoni Claudia , Cancila Valeria , Zanardi Federica , Ajazi Arta , Cortellino Salvatore , Vallacchi Viviana , Squarcina Paola , Cova Agata , Pesce Samantha , Frati Paola , Mall Raghvendra , Corsetto Paola Antonia , Rizzo Angela Maria , Ferraris Cristina , Folli Secondo , Garassino Marina Chiara , Capri Giuseppe , Bianchi Giulia , Colombo Mario Paolo , Minucci Saverio , Foiani Marco , Longo Valter Daniel , Apolone Giovanni , Torri Valter , Pruneri Giancarlo , Bedognetti Davide , Rivoltini Licia , de Braud Filippo
Published: April 2023

Supplementary Figures