bluuebunny/crossref_metadata_2025 huggingface dataset:
Inhibition of APN/CD13 leads to suppressed progressive potential in ovarian carcinoma cells
Authors: Terauchi Mikio , Kajiyama Hiroaki , Shibata Kiyosumi , Ino Kazuhiko , Nawa Akihiro , Mizutani Shigehiko , Kikkawa Fumitaka
Published: August 2007

Background

Aminopeptidase N (APN/CD13), a 150-kDa metalloprotease, is a multifunctional cell surface aminopeptidase with ubiquitous expression. Recent studies have suggested that APN/CD13 plays an important role in tumor progression of several human malignancies. In the current study, we investigated the role of APN/CD13 in ovarian carcinoma (OVCA) progression.

Methods

We first examined the expression of APN/CD13 at the protein level in a variety of OVCA cell lines and tissues. We subsequently investigated whether there was a correlation between APN/CD13 expression and invasive potential of various OVCA cell lines. Moreover, we investigated the function of APN/CD13 in OVCA cells using bestatin, an APN/CD13 inhibitor, or transfection of siRNA for APN/CD13.

Results

We confirmed that APN/CD13 was expressed in OVCA tissues and cell lines to various extents. There was a positive correlation between APN/CD13 expression and migratory potential in various OVCA cell lines with accordingly enhanced secretion of endogenous MMP-2. Subsequently, we found a significant decrease in the proliferative and migratory abilities of OVCA cells after the addition of bestatin or the inhibition of APN/CD13 expression by siRNA. Furthermore, in an animal model, daily intraperitoneal administration of bestatin after inoculation of OVCA cells resulted in a decrease of peritoneal dissemination and in prolonged survival of nude mice.

Conclusion

The current data indicate the possible involvement of APN/CD13 in the development of OVCA, and suggest that clinical use of bestatin may contribute to better prognosis for ovarian carcinoma patients.
Domain selection combined with improved cloning strategy for high throughput expression of higher eukaryotic proteins
Authors: Chen Yunjia , Qiu Shihong , Luan Chi-Hao , Luo Ming
Published: August 2007

Background

Expression of higher eukaryotic genes as soluble, stable recombinant proteins is still a bottleneck step in biochemical and structural studies of novel proteins today. Correct identification of stable domains/fragments within the open reading frame (ORF), combined with proper cloning strategies, can greatly enhance the success rate when higher eukaryotic proteins are expressed as these domains/fragments. Furthermore, a HTP cloning pipeline incorporated with bioinformatics domain/fragment selection methods will be beneficial to studies of structure and function genomics/proteomics.

Results

With bioinformatics tools, we developed a domain/domain boundary prediction (DDBP) method, which was trained by available experimental data. Combined with an improved cloning strategy, DDBP had been applied to 57 proteins from C. elegans. Expression and purification results showed there was a 10-fold increase in terms of obtaining purified proteins. Based on the DDBP method, the improved GATEWAY cloning strategy and a robotic platform, we constructed a high throughput (HTP) cloning pipeline, including PCR primer design, PCR, BP reaction, transformation, plating, colony picking and entry clones extraction, which have been successfully applied to 90 C. elegans genes, 88 Brucella genes, and 188 human genes. More than 97% of the targeted genes were obtained as entry clones. This pipeline has a modular design and can adopt different operations for a variety of cloning/expression strategies.

Conclusion

The DDBP method and improved cloning strategy were satisfactory. The cloning pipeline, combined with our recombinant protein HTP expression pipeline and the crystal screening robots, constitutes a complete platform for structure genomics/proteomics. This platform will increase the success rate of purification and crystallization dramatically and promote the further advancement of structure genomics/proteomics.
Construction of miniantibodies for the in vivo study of human autoimmune diseases in animal models
Authors: Di Niro Roberto , Ziller Federica , Florian Fiorella , Crovella Sergio , Stebel Marco , Bestagno Marco , Burrone Oscar , Bradbury Andrew RM , Secco Paola , Marzari Roberto , Sblattero Daniele
Published: August 2007

Background

Phage display antibody libraries have been made from the lymphocytes of patients suffering from autoimmune diseases in which the antibodies are known to play a role in the pathogenesis or are important for the diagnosis of the disease. In the case of Celiac Disease, the immune response is directed against the autoantigen tissue transglutaminase. However, despite numerous studies, the role of these antibodies in the pathogenesis of this disease has not been elucidated.

Results

We were able to engineer specific anti-transglutaminase antibody fragments in the form called "miniantibody". These are produced by genetic fusion of anti-tTG scFv to Human, Mouse or Rat Fc domains, making them suitable for in vivo expression. The results obtained here indicate that the miniantibody molecule is efficiently secreted, and that the reactivity to the antigen is retained even after fusion to heterologous Fc domains. Further analysis demonstrate that the molecule is secreted as homodimeric, mimicking original antibody structure. Finally, the in vivo expression in mice leads to detectable serum levels with no apparent gross immune response by the host.

Conclusion

In this work we demonstrated the usefulness of a method for the in vivo expression of miniantibodies specific to transglutaminase, corresponding to the autoimmune specificity of Celiac Disease. This can be proposed as a general method to study the pathogenic role of autoimmune antibodies in autoimmune diseases.
Comparative Analysis of Protein Structure Alignments
Authors: Mayr Gabriele , Domingues Francisco S , Lackner Peter
Published: August 2007

Background

Several methods are currently available for the comparison of protein structures. These methods have been analysed regarding the performance in the identification of structurally/evolutionary related proteins, but so far there has been less focus on the objective comparison between the alignments produced by different methods.

Results

We analysed and compared the structural alignments obtained by different methods using three sets of pairs of structurally related proteins. The first set corresponds to 355 pairs of remote homologous proteins according to the SCOP database (ASTRAL40 set). The second set was derived from the SISYPHUS database and includes 69 protein pairs (SISY set). The third set consists of 40 pairs that are challenging to align (RIPC set). The alignment of pairs of this set requires indels of considerable number and size and some of the proteins are related by circular permutations, show extensive conformational variability or include repetitions. Two standard methods (CE and DALI) were applied to align the proteins in the ASTRAL40 set. The extent of structural similarity identified by both methods is highly correlated and the alignments from the two methods agree on average in more than half of the aligned positions. CE, DALI, as well as four additional methods (FATCAT, MATRAS, C
α
-match and SHEBA) were then compared using the SISY and RIPC sets. The accuracy of the alignments was assessed by comparison to reference alignments. The alignments generated by the different methods on average match more than half of the reference alignments in the SISY set. The alignments obtained in the more challenging RIPC set tend to differ considerably and match reference alignments less successfully than the SISY set alignments.

Conclusion

The alignments produced by different methods tend to agree to a considerable extent, but the agreement is lower for the more challenging pairs. The results for the comparison to reference alignments are encouraging, but also indicate that there is still room for improvement.
A systematic evaluation of payback of publicly funded health and health services research in Hong Kong
Authors: Kwan Patrick , Johnston Janice , Fung Anne YK , Chong Doris SY , Collins Richard A , Lo Su V
Published: August 2007

Background

The Health and Health Services Research Fund (HHSRF) is dedicated to support research related to all aspects of health and health services in Hong Kong. We evaluated the fund's outcomes and explored factors associated with the translation of research findings to changes in health policy and provider behaviour.

Methods

A locally suitable questionnaire was developed based on the "payback" evaluation framework and was sent to principal investigators of the completed research projects supported by the fund since 1993. Research "payback" in six outcome areas was surveyed, namely knowledge production, use of research in the research system, use of research project findings in health system policy/decision making, application of the research findings through changed behaviour, factors influencing the utilization of research, and health/health service/economic benefits.

Results

Principal investigators of 178 of 205 (87%) completed research projects returned the questionnaire. Investigators reported research publications in 86.5% (mean = 5.4 publications per project), career advancement 34.3%, acquisition of higher qualifications 38.2%, use of results in policy making 35.4%, changed behaviour in light of findings 49.4%, evidence of health service benefit 42.1% and generated subsequent research in 44.9% of the projects. Payback outcomes were positively associated with the amount of funding awarded. Multivariate analysis found participation of investigators in policy committees and liaison with potential users were significantly associated with reported health service benefit (odds ratio [OR]participation = 2.86, 95% confidence interval [CI] 1.28–6.40; ORliaison = 2.03, 95% CI 1.05–3.91), policy and decision-making (ORparticipation = 10.53, 95% CI 4.13–26.81; ORliaison = 2.52, 95% CI 1.20–5.28), and change in behavior (ORparticipation = 3.67, 95% CI 1.53–8.81).

Conclusion

The HHSRF has produced substantial outcomes and compared favourably with similar health research funds in other developed economies. Further studies are needed to better understand the factors and pathways associated with the translation of research findings into practice.
Drug utilization and cost in a Medicaid population: A simulation study of community vs. mail order pharmacy
Authors: Valluri Satish , Seoane-Vazquez Enrique , Rodriguez-Monguio Rosa , Szeinbach Sheryl L
Published: August 2007

Background

Outpatient drugs are dispensed through both community and mail order pharmacies. There is no empirical evidence that substitution of community pharmacy with mail order reduces overall drug expenditures. The need for evaluating the potential effects on utilization and costs of the possible extension of mail order services in Medicaid provides the rationale for conducting this study. This study compares drug utilization and drug product cost in community vs. mail order pharmacy dispensing services in a Medicaid population.

Methods

This study is a retrospective cohort study comparing utilization and cost patterns in community vs. mail order pharmacy. A simulation model was employed to assess drug utilization and cost in mail order pharmacy using community pharmacy claim data. The model assumed that courses of drug therapy (CDT) in mail order pharmacy would have utilization patterns similar to those found in community pharmacy. A 95% confidence interval surrounding changes in average utilization and average cost were estimated using bootstrap analysis. A sensitivity analysis was performed by varying drug selection criteria and supply, fill point, and medication possession ratio (MPR). Sub-analyses were performed to address differences between mail order and community pharmacy related to therapeutic class and dual-eligible patients.

Data for the study derived from pharmacy claims database of Ohio Medicaid State program for the period January 2000-September 2004. Drug claims were aggregated to obtain a set of CDTs representing unique patient IDs and unique drug products. Drug product cost estimates excluded dispensing fees and were used to estimate the cost reduction required in mail order to become cost neutral in comparison with community pharmacy.

Results

The baseline model revealed that the use of mail order vs. community pharmacy would result in a 5.5% increase in drug utilization and a 5.4% cost reduction required in mail order to become cost neutral. Results from Ohio Medicaid drugs for chronic use revealed a 5.1% increase in utilization and a 4.9% cost reduction required to become cost neutral in comparison with community pharmacy.

Conclusion

The results of the simulation model indicate that mail order pharmacy increases drug utilization and can also increase drug product cost if the cost per unit is not reduced accordingly. Prior consideration should be given to the patient population, day-supply, disease, therapy, and insurance characteristics to ensure the appropriate use of mail order pharmacy services.
A low-cost repellent for malaria vectors in the Americas: results of two field trials in Guatemala and Peru
Authors: Moore Sarah J , Darling Samuel T , Sihuincha Moisés , Padilla Norma , Devine Gregor J
Published: August 2007

Background

The cost of mosquito repellents in Latin America has discouraged their wider use among the poor. To address this problem, a low-cost repellent was developed that reduces the level of expensive repellent actives by combining them with inexpensive fixatives that appear to slow repellent evaporation. The chosen actives were a mixture of para-menthane-diol (PMD) and lemongrass oil (LG).

Methods

To test the efficacy of the repellent, field trials were staged in Guatemala and Peru. Repellent efficacy was determined by human-landing catches on volunteers who wore the experimental repellents, control, or 15% DEET. The studies were conducted using a balanced Latin Square design with volunteers, treatments, and locations rotated each night.

Results

In Guatemala, collections were performed for two hours, commencing three hours after repellent application. The repellent provided >98% protection for five hours after application, with a biting pressure of >100 landings per person/hour. The 15% DEET control provided lower protection at 92% (p < 0.0001). In Peru, collections were performed for four hours, commencing two hours after repellent application. The PMD/LG repellent provided 95% protection for six hours after application with a biting pressure of >46 landings per person/hour. The 20% DEET control provided significantly lower protection at 64% (p < 0.0001).

Conclusion

In both locations, the PMD/LG repellent provided excellent protection up to six hours after application against a wide range of disease vectors including Anopheles darlingi. The addition of fixatives to the repellent extended its longevity while enhancing efficacy and significantly reducing its cost to malaria-endemic communities.
Self assembly of amphiphilic C60 fullerene derivatives into nanoscale supramolecular structures
Authors: Partha Ranga , Lackey Melinda , Hirsch Andreas , Casscells S Ward , Conyers Jodie L
Published: August 2007

Background

The amphiphilic fullerene monomer (AF-1) consists of a "buckyball" cage to which a Newkome-like dendrimer unit and five lipophilic C12 chains positioned octahedrally to the dendrimer unit are attached. In this study, we report a novel fullerene-based liposome termed 'buckysome' that is water soluble and forms stable spherical nanometer sized vesicles. Cryogenic electron microscopy (Cryo-EM), transmission electron microscopy (TEM), and dynamic light scattering (DLS) studies were used to characterize the different supra-molecular structures readily formed from the fullerene monomers under varying pH, aqueous solvents, and preparative conditions.

Results

Electron microscopy results indicate the formation of bilayer membranes with a width of ~6.5 nm, consistent with previously reported molecular dynamics simulations. Cryo-EM indicates the formation of large (400 nm diameter) multilamellar, liposome-like vesicles and unilamellar vesicles in the size range of 50–150 nm diameter. In addition, complex networks of cylindrical, tube-like aggregates with varying lengths and packing densities were observed. Under controlled experimental conditions, high concentrations of spherical vesicles could be formed. In vitro results suggest that these supra-molecular structures impose little to no toxicity. Cytotoxicity of 10–200 μM buckysomes were assessed in various cell lines. Ongoing studies are aimed at understanding cellular internalization of these nanoparticle aggregates.

Conclusion

In this current study, we have designed a core platform based on a novel amphiphilic fullerene nanostructure, which readily assembles into supra-molecular structures. This delivery vector might provide promising features such as ease of preparation, long-term stability and controlled release.
A cross-sectional look at patient concerns in the first six weeks following primary total knee arthroplasty
Authors: Rastogi Ravi , Davis Aileen M , Chesworth Bert M
Published: August 2007

Background

To date, no researchers have investigated patient concerns in the first six weeks following primary total knee arthroplasty (TKA). An understanding of patient concerns at a time when physical therapists are involved in the treatment of these patients will aid clinicians in providing patient-centered care. Linking of items to the International Classification of Functioning, Disability and Health (ICF) allows for comparison and sharing of data amongst researchers, as the ICF is the accepted framework for evaluating disability in rehabilitation. The objective of this study was to identify patient concerns in the first six weeks following primary TKA and link these concerns to components of the ICF and map them to commonly used outcome measures.

Methods

Individual interviews were conducted to identify patient concerns during their recovery following primary TKA. Concerns identified by patients were analysed for content and linked to the components of the ICF using the operational definitions of the ICF components. These concerns were mapped to the WOMAC, KOOS and Oxford Knee Scale.

Results

Thirty patients (18 female) with an average age (SD) of 68.4 (11.1) years completed the study. Patients identified 32 concerns. Twenty-two percent (n = 7) of the concerns linked to Body Function and Structure, 47% (n = 15) to Activity, 13% (n = 4) to Participation, and 13% (n = 4) to the Environmental Factors component of the ICF. Six percent (n = 2) of the concerns did not link to the ICF. Of the 32 concerns identified by patients 14 mapped to the KOOS, 11 to the WOMAC and 4 to the Oxford Knee Scale.

Conclusion

Patient concerns linked to four different components of the ICF indicating that patients are involved in or are thinking of multiple aspects of life even in this early phase of recovery. The KOOS was found to be the most appropriate for use based on the patients' perspective. However, less than half of the concerns identified by patients were covered by the KOOS, WOMAC or Oxford Knee Scale indicating that other existing measures that evaluate the concepts identified as important to patients should be considered when evaluating outcomes during this acute phase of recovery following primary TKA.
The effect of versican G3 domain on local breast cancer invasiveness and bony metastasis
Authors: Yee Albert JM , Akens Margarete , Yang Bing L , Finkelstein Joel , Zheng Peng-Sheng , Deng Zhaoqiong , Yang Burton
Published: August 2007

Introduction

Increased versican expression has been associated with local breast cancer invasiveness and a more aggressive tumor phenotype. The cellular mechanisms are not fully understood and this study evaluated versican G3 domain with its EGF-like motifs in influencing tumor invasion and metastasis.

Methods

One recombinant construct was synthesized (a signal peptide for product secretion and the versican G3 domain). The construct was stably transfected into human breast carcinoma MT-1 cells. Cell viability in vitro was evaluated in low serum and serum starvation conditions. In vivo study of tumor growth was evaluated in a nude mouse model. G3 effects on rodent vascular endothelial cells were evaluated in vitro on cell survival, apoptosis, migration, and vascular formation. The effects of VEGF, fibronectin, and G3 on vascular formation were examined. An intracardiac injection model of metastatic human breast carcinoma tested the effect of G3 on distant bony and soft tissue metastasis. Analysis of metastatic burden included histology, radiographs, and micro-CT quantification of osteolysis.

Results

A greater viability of cancer cells was observed in low serum and serum-free conditions in the presence of versican G3. Larger subcutaneous tumors were obtained in the G3 group following tumor cell injection into CD1 mice. G3 induced a greater degree of rodent vascular endothelial cell proliferation and migration in vitro. Simultaneous presence of fibronectin, VEGF, and G3 promoted endothelial cell migration in wound-healing assays as compared to the treatments containing none, one or two of these molecules. Systemic tumor burden to distant bony and soft tissue metastatic sites was greater in the G3 group using the intracardiac injection metastatic model

Conclusion

Versican G3 domain appears to be important in local and systemic tumor invasiveness of human breast cancer. Effects include enhancing cell viability, proliferation, migration and enhancing local tumor growth. Potential effects on angiogenesis include enhancing vascular endothelial proliferation, migration, and vessel formation. The interactions between tumor cells, surrounding stromal components and neo-vascularization in breast cancer may include interactions with VEGF and fibronectin. The propensity of versican G3 to influence tumor invasion to bone and the mechanisms of G3 mediated osteolysis warrants ongoing studies.
The effect of different volumes and temperatures of saline on the bladder pressure measurement in critically ill patients
Authors: Chiumello Davide , Tallarini Federica , Chierichetti Monica , Polli Federico , Li Bassi Gianluigi , Motta Giuliana , Azzari Serena , Carsenzola Cristian , Gattinoni Luciano
Published: August 2007

Introduction

Intra-abdominal hypertension is common in critically ill patients and is associated with increased severity of organ failure and mortality. The techniques most commonly used to estimate intra-abdominal pressure are measurements of bladder and gastric pressures. The bladder technique requires that the bladder be infused with a certain amount of saline, to ensure that there is a conductive fluid column between the bladder and the transducer. The aim of this study was to evaluate the effect of different volumes and temperatures of infused saline on bladder pressure measurements in comparison with gastric pressure.

Methods

Thirteen mechanically ventilated critically ill patients (11 male; body mass index 25.5 ± 4.6 kg/m2; arterial oxygen tension/fractional inspired oxygen ratio 225 ± 48 mmHg) were enrolled. Bladder pressure was measured using volumes of saline from 50 to 200 ml at body temperature (35 to 37°C) and room temperature (18 to 20°C).

Results

Bladder pressure was no different between 50 ml and 100 ml saline (9.5 ± 3.7 mmHg and 13.7 ± 5.6 mmHg), but it significantly increased with 150 and 200 ml (21.1 ± 10.4 mmHg and 27.1 ± 15.5 mmHg). Infusion of saline at room temperature caused a significantly greater bladder pressure compared with saline at body temperature. The lowest difference between bladder and gastric pressure was obtained with a volume of 50 ml.

Conclusion

The bladder acts as a passive structure, transmitting intra-abdominal pressure only with saline volumes between 50 ml and 100 ml. Infusion of a saline at room temperature caused a higher bladder pressure, probably because of contraction of the detrusor bladder muscle.
PHIDIAS: a pathogen-host interaction data integration and analysis system
Authors: Xiang Zuoshuang , Tian Yuying , He Yongqun
Published: August 2007

The Pathogen-Host Interaction Data Integration and Analysis System (PHIDIAS) is a web-based database system that serves as a centralized source to search, compare, and analyze integrated genome sequences, conserved domains, and gene expression data related to pathogen-host interactions (PHIs) for pathogen species designated as high priority agents for public health and biological security. In addition, PHIDIAS allows submission, search and analysis of PHI genes and molecular networks curated from peer-reviewed literature. PHIDIAS is publicly available at http://www.phidias.us.
Novel metrics for evaluating the functional coherence of protein groups via protein semantic network
Authors: Zheng Bin , Lu Xinghua
Published: August 2007

We present the metrics for assessing overall functional coherence of a group of proteins based on associated biomedical literature. A probabilistic topic model is applied to extract biologic concepts from a corpus of protein-related biomedical literature. Bipartite protein semantic networks are constructed, so that the functional coherence of a protein group can be evaluated with metrics that measure the closeness and strength of connectivity of the proteins in the network.
A role for the Myoblast city homologues Dock1 and Dock5 and the adaptor proteins Crk and Crk-like in zebrafish myoblast fusion
Authors: Moore Catherine A. , Parkin Caroline A. , Bidet Yannick , Ingham Philip W.
Published: August 2007

Myoblast fusion follows a defined sequence of events that is strikingly similar in vertebrates and invertebrates. Genetic analysis in Drosophila has identified many of the molecules that mediate the different steps in the fusion process; by contrast, the molecular basis of myoblast fusion during vertebrate embryogenesis remains poorly characterised. A key component of the intracellular fusion pathway in Drosophila is the protein encoded by the myoblast city (mbc) gene, a close homologue of the vertebrate protein dedicator of cytokinesis 1 (DOCK1,formerly DOCK180). Using morpholino antisense-oligonucleotide-mediated knockdown of gene activity in the zebrafish embryo, we show that the fusion of embryonic fast-twitch myoblasts requires the activities of Dock1 and the closely related Dock5 protein. In addition, we show that the adaptor proteins Crk and Crk-like (Crkl), with which Dock proteins are known to interact physically, are also required for myoblast fusion.
Otx1l, Otx2 and Irx1b establish and position the ZLI in the diencephalon
Authors: Scholpp Steffen , Foucher Isabelle , Staudt Nicole , Peukert Daniela , Lumsden Andrew , Houart Corinne
Published: August 2007

The thalamic complex is the major sensory relay station in the vertebrate brain and comprises three developmental subregions: the prethalamus, the thalamus and an intervening boundary region - the zona limitans intrathalamica(ZLI). Shh signalling from the ZLI confers regional identity of the flanking subregions of the ZLI, making it an important local signalling centre for regional differentiation of the diencephalon. However, our understanding of the mechanisms responsible for positioning the ZLI along the neural axis is poor. Here we show that, before ZLI formation, both Otx1l and Otx2(collectively referred to as Otx1l/2) are expressed in spatially restricted domains. Formation of both the ZLI and the Irx1b-positive thalamus require Otx1l/2; embryos impaired in Otx1l/2 function fail to form these areas, and,instead, the adjacent pretectum and, to a lesser extent, the prethalamus expand into the mis-specified area. Conditional expression of Otx2 in these morphant embryos cell-autonomously rescues the formation of the ZLI at its correct location. Furthermore, absence of thalamic Irx1b expression, in the presence of normal Otx1l/2 function, leads to a substantial caudal broadening of the ZLI by transformation of thalamic precursors. We therefore propose that the ZLI is induced within the competence area established by Otx1l/2, and is posteriorly restricted by Irx1b.
Sexual health services for South Asians in London, UK: a case–control study
Authors: Tariq S , Edwards S G , Nalabanda A , Ward H , Allen E , Fenton K , Mercey D , Sethi G
Published: August 2007

National guidance on sexual health in England recommends service development to meet the specific needs of ethnic minority populations. Our aim was to evaluate mode of referral, number of sexually transmitted infections (STIs) diagnosed, and the offering and uptake of HIV testing in patients of South Asian ethnicity. A retrospective case–control study was undertaken in two London genito-urinary (GU) medicine clinics.

There were 250 case–control pairs with approximately equal numbers of men and women. South Asians were less likely to have an STI (Odds ratio [OR] 0.66, 95% confidence interval [CI] 0.45, 0.97) or to report risk factors for HIV (OR 0.45, 95% CI 0.28, 0.71). Offering and uptake of HIV antibody testing were high in both South Asian and non-South Asian groups (OR 0.62, 95% CI 0.27, 1.51). South Asians were significantly more likely than controls to have been referred by other medical services rather than self-referred (OR 2.00, 95% CI 1.32, 3.01), which is in keeping with poorer access to GU medicine services in London.
Verrucous carcinoma – an embarrassing problem?
Authors: Wong M , Walzman M , Zayyan K , Gupta R Das
Published: August 2007

Human papillomaviruses (HPVs) types 6 and 11 are usually associated with benign genital condylomata, but here we describe an extreme case of verrucous carcinoma associated with HPV 6 in a patient too embarrassed to seek early medical advice.
Treatment of ano-genital warts: the effect of an educational event on practitioner choice
Authors: Sonnex C , Vrotsou K
Published: August 2007

To determine whether an educational event can affect treatment choice for ano-genital warts, genitourinary medicine clinicians attending a wart management lecture were shown 14 photographs of genital warts of differing morphology at different sites and asked to choose their preferred method of treatment. Study questionnaires were completed pre-lecture and repeated after the lecture and discussion. Podophyllin was chosen significantly less frequently and cryotherapy more frequently post-lecture for certain wart types. Podophyllotoxin was favoured for multiple small penile and posterior fourchette warts, whereas imiquimod was chosen predominantly for large or bulky lesions. Trichloracetic acid was infrequently chosen as a treatment option (<6% of respondents). This study has shown that clinicians attending a lecture on the management of ano-genital warts do change their treatment choice for certain clinical scenarios. Whether opting for a particular treatment in a lecture setting translates to altered practice in the clinical setting requires further study.
The contribution of APTIMA Combo 2 assay to the diagnosis of gonorrhoea in genitourinary medicine setting
Authors: Moss S , Mallinson H
Published: August 2007

For 929 female and 821 male patients attending a genitourinary clinic, samples intended for chlamydia diagnosis were dual tested by nucleic acid amplification for both chlamydia and Neisseria gonorrhoeae (NG). The assay used, Gen-probe APTIMA Combo 2 (AC2) detected all cases of NG found by conventional microscopy and culture. AC2 identified additional patients who had partners with NG, but were themselves negative by microscopy and culture. Few, if any, false-positive AC2 results were found. Use of AC2 increased the number of patients treated for NG. It can reduce the number of specimens required and may limit the need for multiple site testing.
The use of graduated compression stockings in association with fondaparinux in surgery of the hip
Authors: Cohen A. T. , Skinner J. A. , Warwick D. , Brenkel I.
Published: August 2007

Little is known about the efficacy of graduated compression stockings in preventing venous thromboembolism after hip surgery. We conducted a prospective, randomised single-blind study to determine whether the addition of compression stockings to fondaparinux conferred any additional benefit.

The study included 874 patients, of whom 795 could be evaluated (400 in the fondaparinux group and 395 in the fondaparinux plus compression stocking group). Fondaparinux was given post-operatively for five to nine days, either alone or combined with wearing stockings, which were worn for a mean 42 days (35 to 49).

The study outcomes were venous thromboembolism, or sudden death before day 42. Duplex ultrasonography was scheduled within a week of day 42. Safety outcomes were bleeding and death from venous thromboembolism.

The prevalence of deep-vein thrombosis was similar in the two groups 5.5% (22 of 400) in the fondaparinux group and 4.8 (19 of 395) in the fondaparinux plus stocking group (odds ratio 0.88, 95% confidence interval 0.46 to 1.65, p = 0.69). Major bleeding occurred in only one patient.

The addition of graduated compression stockings to fondaparinux appears to offer no additional benefit over the use of fondaparinux alone.
The value of MRI undertaken immediately after reduction of the hip as a predictor of long-term acetabular dysplasia
Authors: Mitchell P. D. , Chew N. S. , Goutos I. , Healy J. C. , Lee J. C. , Evans S. , Hulme A.
Published: August 2007

Our aim was to determine whether abnormalities noted on MRI immediately after reduction for developmental dysplasia of the hip could predict the persistance of dysplasia and aid surgical planning. Scans of 13 hips in which acetabular dysplasia had resolved by the age of four years were compared with those of five which had required pelvic osteotomy for persisting dysplasia. The scans were analysed by two consultant musculoskeletal radiologists who were blinded to the outcome in each child.

The postreduction scans highlighted a number of anatomical abnormalities secondary to developmental dysplasia of the hip, but statistical analysis showed that none were predictive of persisting acetabular dysplasia in the older child, suggesting that the factors which determine the long-term outcome were not visible on these images.
Locally administered low-dose alendronate increases bone mineral density during distraction osteogenesis in a rabbit model
Authors: Omi H. , Kusumi T. , Kijima H. , Toh S.
Published: August 2007

We investigated the effect of locally administered bisphosphonate on distraction osteogenesis in a rabbit model and evaluated its systemic effect. An osteotomy on the right tibia followed by distraction for four weeks was performed on 47 immature rabbits. They were divided into seven equal groups, with each group receiving a different treatment regime. Saline and three types of dosage of alendronate (low, 0.75 μg/kg; mid, 7.5 μg/kg and high 75 μg/kg) were given by systemic injection in four groups, and saline and two dosages (low and mild) were delivered by local injection to the distraction gap in the remaining three groups. The injections were performed five times weekly during the period of distraction.

After nine weeks the animals were killed and image analysis and mechanical testing were performed on the distracted right tibiae and the left tibiae which served as a control group. The local low-dose alendronate group showed a mean increase in bone mineral density of 124.3 mg/cm3 over the local saline group (analysis of variance, p < 0.05) without any adverse effect on the left control tibiae.

The findings indicate that the administration of local low-dose alendronate could be an effective pharmacological means of improving bone formation in distraction osteogenesis.
Revision total hip replacement using cemented collarless double-taper femoral components
Authors: Howie D. W. , Wimhurst J. A. , McGee M. A. , Carbone T. A. , Badaruddin B. S.
Published: August 2007

We investigated 219 revisions of total hip replacement (THR) in 211 patients using a collarless double-taper cemented femoral component. The mean age of the patients was 72 years (30 to 90). The 137 long and 82 standard length stems were analysed separately. The mean follow-up was six years (2 to 18), and no patient was lost to follow-up.

Survival of the long stems to re-revision for aseptic loosening at nine years was 98% (95% confidence interval (CI) 94 to 100), and for the standard stems was 93% (95% CI 85 to 100). At five years, one long stem was definitely loose radiologically and one standard stem was probably loose. Pre-operative femoral bone deficiency did not influence the results for the long stems, and corrective femoral osteotomy was avoided, as were significant subsidence, major stress shielding and persistent thigh pain.

Because of these reliable results, cemented long collarless double-taper femoral components are recommended for routine revision THR in older patients.
The internervous safe zone for incision of the capsule of the hip
Authors: Kampa R. J. , Prasthofer A. , Lawrence-Watt D. J. , Pattison R. M.
Published: August 2007

In order to determine the potential for an internervous safe zone, 20 hips from human cadavers were dissected to map out the precise pattern of innervation of the hip capsule. The results were illustrated in the form of a clock face. The reference point for measurement was the inferior acetabular notch, representing six o’clock. Capsular branches from between five and seven nerves contributed to each hip joint, and were found to innervate the capsule in a relatively constant pattern. An internervous safe zone was identified anterosuperiorly in an arc of 45° between the positions of one o’clock and half past two.

Our study shows that there is an internervous zone that could be safely used in a capsule-retaining anterior, anterolateral or lateral approach to the hip, or during portal placement in hip arthroscopy.
Testing of Composite Stone Faced Aluminum Honeycomb Panels
Authors: Scheffler Michael J. , Kneezel Daren S.
Published: August 2007

Physical and mechanical testing was conducted on composite stone faced aluminum honeycomb panels manufactured in the United States for use as exterior veneer panels on buildings. Testing was conducted on specimens cut from new stone faced panels as well as stone faced panels removed from service. For comparison purposes specimens cut from new unfaced honeycomb panels were also tested. The purpose of the testing was to measure certain strength, durability, and performance characteristics of the faced honeycomb panel’s composite construction. The stone faced specimens tested included those faced with travertine, limestone, and granite. Old travertine faced specimens had been in service for more than 18 years. The results very strongly suggest that the structural performance of the composite panel is dominated by the aluminum honeycomb portion. The stone portion is essentially a thin veneer adhered to the honeycomb that provides little if any structural strength.
Enhanced ferroelectricity and ferromagnetism in La1−xBixCrO3 by Bi3+ substitution
Authors: Guo H-Y. , Chen J.I.L. , Ye Z-G. , Arrott A.S.
Published: August 2007

The ferroelectric and magnetic properties of the perovskite solid solution, (1 − x)LaCrO3–xBiCrO3, have been investigated. While pure LaCrO3 does not show ferroelectric hysteresis even at 77 K, the solid solution of La1−xBixCrO3 with x = 0.1, 0.2, 0.3, and 0.35 displays ferroelectric hysteresis, with the remanent polarization increasing with the increase of the Bi3+ content. Using a superconducting quantum interference device, the magnetization was measured versus temperature under field cooling (FC) and zero field cooling (ZFC) conditions. Magnetic hysteresis has been found in La1−xBixCrO3 (0.1 ⩽ x ⩽ 0.3) below the Néel temperature, TN. With the increase of Bi3+ content, TN decreases, while the magnetization below TN is enhanced. While the ferroelectric and magnetic properties could be due to different origins, the Bi substitution results in both ferroelectric and magnetic enhancements in the (1 − x)LaCrO3–xBiCrO3 solid solutions.
Magnetic ordering in relaxor ferroelectric (1 − x)Pb(Fe2/3W1/3)O3–xPbTiO3 single crystals
Authors: Feng Li , Guo Haiyan , Ye Zuo-Guang
Published: August 2007

Single crystals of the perovskite solid solution (1 − x)Pb(Fe2/3W1/3)O3–xPbTiO3, with x = 0, 0.07, 0.27, and 0.75, have been synthesized by the high-temperature solution growth using PbO as flux and characterized by x-ray diffraction and dielectric and magnetic measurements. The crystal structure at room temperature changes from a pseudocubic to a tetragonal phase with the PbTiO3 (PT) content increasing to x ⩾ 0.27. As the amount of PT increases, the relaxor ferroelectric behavior of Pb(Fe2/3W1/3)O3 (PFW) is transformed toward a normal ferroelectric state with sharp and nondispersive peaks of dielectric permittivity at TC. Two types of magnetic orderings are observed on the temperature dependence of the magnetization in the crystals with x ⩽ 0.27. This behavior is explained based on the relationships among the magnetic ordering, perovskite structure, composition, and relaxor ferroelectric properties. Furthermore, the macroscopic magnetization of the system was measured under the application of a magnetic field, which demonstrates different magnetic behavior associated with the weakly ferromagnetic, antiferromagnetic, and paramagnetic ordering in the temperature range of 2 to 390 K. Interestingly, the low-temperature ferromagnetism is enhanced by the addition of ferroelectric PT up to x = 0.27.
Electromagnetic fields induced by a point source in a uniaxial multiferroic full-space, half-space, and bimaterial space
Authors: Wang X. , Pan E.
Published: August 2007

Multiferroic magnetoelectrics are materials that are both ferroelectric and ferromagnetic in the same phase. In addition, electric and magnetic polarizations are strongly coupled in some magnetoelectric multiferroic materials. In this work, by virtue of the image method, exact closed-form Green’s functions are derived for a uniaxial multiferroic full-space, half-space, and bimaterial space. While for the bimaterial space case the interface is assumed to be perfect, for the half-space case four different sets of surface conditions are considered. The point source can be either an electric or a magnetic charge. Numerical results are presented to demonstrate the differences among the infinite-space, half-space, and bimaterial space Green’s functions.
Magnetic phase diagrams of multiferroic hexagonal RMnO3 (R = Er, Yb, Tm, and Ho)
Authors: Yen F. , dela Cruz C. , Lorenz B. , Galstyan E. , Sun Y.Y. , Gospodinov M. , Chu C.W.
Published: August 2007

The magnetic phase diagrams of RMnO3 (R = Er, Yb, Tm, Ho) are investigated up to 14 T via magnetic and dielectric measurements. The stability range of the atomic force microscopy order below the Néel temperature of the studied RMnO3 extends to far higher magnetic fields than previously assumed. Magnetic irreversibility indicating the presence of a spontaneous magnetic moment is found near 50 K for R = Er, Yb, and Tm. At very low temperatures and low magnetic fields, the phase boundary defined by the ordering of the rare-earth moments is resolved. The sizable dielectric anomalies observed along all phase boundaries are evidence for strong spin-lattice coupling in the hexagonal RMnO3. In HoMnO3, the strong magnetoelastic distortions are investigated in more detail via magnetostriction experiments up to 14 T. The results are discussed based on existing data on magnetic symmetries and the interactions among the Mn-spins, the rare-earth moments, and the lattice.
Effects of exchange interactions on magnetoacoustic resonance in layered nanocomposites of yttrium iron garnet and lead zirconate titanate
Authors: Ryabkov O.V. , Averkin S.V. , Bichurin M.I. , Petrov V.M. , Srinivasan G.
Published: August 2007

In ferrite–piezoelectric bilayers, the magnetoelectric (ME) interaction is mediated by mechanical strain. The ME coupling is expected to be strong, particularly when the magnetic and electric subsystems show resonance. Here we address the effect of magnetic exchange interactions on ME coupling at magnetoacoustic resonance (MAR), i.e., at the coincidence of electromechanical resonance in the piezoelectric phase and ferromagnetic resonance in a tangentially magnetized ferrite. When exchange is ignored, the estimated ME coefficient versus frequency profile shows a giant magnetoelectric coefficient at MAR, about 75–100 V/cm Oe for yttrium–iron garnet (YIG)/lead zirconate–titanate (PZT) nano bilayers. The magnetic exchange is predicted to enhance the coupling at MAR and produce a secondary peak due to the excitation of magnetoacoustic modes. Estimates of the ME coefficient are provided as a function of thickness ratio of YIG and PZT.
Study of ideal strengths of metals and alloys by statistical moment method: Temperature dependence
Authors: Hung Vu Van , Masuda-Jindo K. , Hoa Nguyen Thi
Published: August 2007

The ideal strengths of metals and alloys at finite temperatures have been studied using the statistical moment method. The tensile and shear strengths of the body-centered cubic (bcc) transition metals like Mo and W (refractory metals), and ordered FeAl (B2) and Fe3Al (DO3) alloys are calculated as a function of the temperature. The orthogonal tight-binding method is used for bcc transition elements, while the universal binding-energy relation (UBER)-type of pairwise potentials, derived from ab initio density-functional theory, is used for the FeAl and Fe3Al alloys. We discuss the temperature dependence of the tensile and shear strengths of the metals and alloys in conjunction with those of the second-order elastic constants.
A study of ruthenium ultrathin film nucleation on pretreated SiO2 and Hf–silicate dielectric surfaces
Authors: Papadatos Filippos , Consiglio Steven , Skordas Spyridon , Eisenbraun Eric T. , Kaloyeros Alain E.
Published: August 2007

This study explored the effects of substrate surface pretreatments on the nucleation and growth of metal–organic chemical vapor deposited ruthenium. In situ plasma (dry), featuring O2, Ar, and H2/Ar chemistries, and ex situ (wet) treatments, consisting of a standard RCA bath, were examined in the nucleation and growth of up to 50-nm-thick metallic Ru films on SiO2 and Hf–silicate surfaces. The resulting surface morphology, grain size, and roughness of the metallic films were examined by scanning electron microscopy (SEM) and atomic force microscopy (AFM), while Rutherford backscattering spectrometry (RBS) was used for compositional measurements. It was determined that an in situ plasma treatment using a H2/Ar yielded metallic Ru films with the highest nucleation density, smallest grain size, and lowest resistivity. Film buckling was also observed for the Ru films deposited on H2/Ar pretreated surfaces. The behavior was attributed to the presence of compressive strain. The films deposited on RCA-cleaned and Ar plasma treated surfaces exhibited very similar physical and electrical characteristics to the films grown on untreated substrates. Alternatively, the use of O2 plasma surface treatment adversely affected Ru nucleation on the SiO2 surface. Relevant mechanisms for Ru nucleation and growth on SiO2 and Hf–silicate nontreated surfaces are discussed in the context of the various predeposition dry and wet treatments.
Wettability in pressure infiltration of SiC and oxidized SiC particle compacts by molten Al and Al-12wt%Si alloy
Authors: Molina J.M. , Tian J. , Garcia-Cordovilla C. , Louis E. , Narciso J.
Published: August 2007

The infiltration behavior of compacts of SiC particles in two surface conditions, as-received and thermally oxidized, was investigated by using pure Al and Al-12wt%Si as infiltrating metals. Analysis of the threshold pressure for infiltration revealed that the process is governed by the same contact angle for all different systems, no matter the metal or particle condition. This leads to the conclusion that oxidation does not modify the wetting characteristics of the particles, most probably because they are already covered by a thin native oxide layer that remains unaltered in processing routes involving short contact times and low temperatures, such as actual conditions of pressure infiltration at 700 °C.