bluuebunny/crossref_metadata_2025 huggingface dataset:
Textural Properties of Bakery Products: A Review of Instrumental and Sensory Evaluation Studies
Authors: Guiné Raquel P. F.
Published: August 2022

Bakery products are an important sector of the food industry globally and are part of the regular diets of many people. Texture encompasses many product characteristics and plays a pivotal role in consumer acceptance. This review focuses on the studies that evaluate textural properties in a set of bakery products, either using instrumental texture measurements or sensorial evaluations. A search was conducted on scientific databases, and selection was based on some eligibility criteria, resulting in a total of 133 articles about the textural properties of bakery products. Of these studies, the majority reported only instrumental analysis of texture (62 out of 133), and a minor number of studies reported only sensorial analyses (n = 14). Still, there was an expressive number of studies in which both methodologies were used to assess the texture of the bakery products (n = 57), i.e., instrumental measurement complemented with sensory evaluation. The results showed that most studies focused on bread (37%) and cakes (33%). With respect to instrumental texture analysis, most tests were TPA (texture profile analysis), and the most commonly used probe was a cylinder disc with a 75 mm diameter. Instrumental tests usually determine textural properties like hardness, cohesiveness, chewiness, and springiness. Regarding the sensorial analyses of texture, mostly descriptive tests were used (72%), particularly sensory profiling, with a lower number of studies performing discriminating (18%) of preference/acceptance tests (10%). In most cases, untrained panels were used, with a most common number of panelists equal to ten, and the most representative evaluated textural attributes were hardness, cohesiveness, chewiness, and springiness. In conclusion, this review provides insight into the methods used to assess the texture of bakery products and which characteristics of these products should be on focus. Furthermore, it was verified that both types of methodologies are complementary in evaluating texture for these types of food products.
Assessment of Different Lactic Acid Bacteria Isolated from Agro-Industrial Residues: First Report of the Potential Role of Weissella soli for Lactic Acid Production from Milk Whey
Authors: Montero-Zamora Jéssica , Fernández-Fernández Silvia , Redondo-Solano Mauricio , Mazón-Villegas Beatriz , Mora-Villalobos José Aníbal , Barboza Natalia
Published: August 2022

The production of lactic acid (LA) through the microbial conversion of agro-industrial residuals is an important process in the biotechnology industry. The growth kinetics of 30 strains of lactic acid bacteria (LAB) isolated from agro-industrial residues were determined and nine strains were selected for microbioreactor fermentation. Lactiplantibacillus pentosus_70-1 (1.662) and L. pentosus_19-2 (1.563) showed the highest OD600 values, whereas the highest growth rates were observed for L. pentosus_19-2 (0.267 h−1) and Weissella soli_31 (0.256 h−1). The production of LA and acetic acid (AA), glucose consumption, and metabolic profiles were determined, without finding significant differences in the production of LA; however, W. soli_29 produced the highest amount of LA (20.833 gL−1) and was able to metabolize most of the studied carbohydrates. Based on these results, W. soli_29 was chosen for a 20 h fermentation in a 7 L bioreactor using both standard medium and milk whey supplemented medium. W. soli_29 produced 16.27 gL−1 and 7.21 gL−1 of LA in each of these mediums, respectively. These results show the underlying potential of Weissella strains for biotechnological applications. Additional analysis which should contemplate different agro-industrial residues and other conditions in bioreactors must be carried out.
Air Quality Health Benefits of the Nevada Renewable Portfolio Standard
Authors: Rezaee Alireza , Chen Lung-Wen , Lin Ge , Buttner Mark , Gakh Maxim , Bloomfield Emma
Published: August 2022

In recent years, renewable portfolio standards (RPS), which require a certain percentage of electricity sold to consumers to come from renewable resources, have been established by many state governments to mitigate emissions of greenhouse gases and air pollutants in the United States. Nevada’s RPS set a target of 50% of electricity to come from renewable sources by 2030. By coupling the U.S. Environmental Protection Agency’s AVoided Emissions and geneRation Tool (AVERT) and CO–Benefits Risk Assessment (COBRA) model, this study assesses potential emission reductions from fossil fuels owing to this requirement and regional health benefits via improved air quality, as well as how these benefits vary spatially under high and low projected electricity demands in 2030. Successful implementation of the RPS could produce health benefits equivalent to USD 3–8 million per year for Nevada residents and up to USD 164 million per year for the entire U.S. Nevada is ranked only 6th among states benefiting from the policy, while California and Washington obtain the most health benefits. There is also inequity among Nevada counties, partly caused by the county population and proximity to major fossil fuel power plants. Lowering electricity demands by 5% in Nevada would lead to a ~10% increase in health benefits. These findings should empower public support of RPS policies and energy conservation to reduce air pollution and public health inequity for the region.
Inflammatory Cytokine: An Attractive Target for Cancer Treatment
Authors: Lee Hyang-Mi , Lee Hye-Jin , Chang Ji-Eun
Published: August 2022

The relationship between inflammation and cancer has attracted attention for a long time. The inflammatory tumor microenvironment consists of inflammatory cells, chemokines, cytokines, and signaling pathways. Among them, inflammatory cytokines play an especially pivotal role in cancer development, prognosis, and treatment. Interleukins, tumor necrosis factor-alpha (TNF-α), transforming growth factor-beta (TGF-β), interferons, and vascular endothelial growth factor (VEGF) are the representative inflammatory cytokines in various cancers, which may promote or inhibit cancer progression. The pro-inflammatory cytokines are associated with advanced cancer stages, resistance to immunotherapy, and poor prognoses, such as in objective response and disease control rates, and progression-free and overall survival. In this review, we selected colorectal, pancreatic, breast, gastric, lung, and prostate cancers, which are well-reported for an association between cancer and inflammatory cytokines. The related cytokines and their effects on each cancer’s development and prognosis were summarized. In addition, the treatment strategies targeting inflammatory cytokines in each carcinoma were also described here. By understanding the biological roles of cancer-related inflammatory cytokines, we may modulate the inflammatory tumor microenvironment for potential cancer treatment.
Neuroprotective Effects of the Lithium Salt of a Novel JNK Inhibitor in an Animal Model of Cerebral Ischemia–Reperfusion
Authors: Schepetkin Igor A. , Chernysheva Galina A. , Aliev Oleg I. , Kirpotina Liliya N. , Smol’yakova Vera I. , Osipenko Anton N. , Plotnikov Mark B. , Kovrizhina Anastasia R. , Khlebnikov Andrei I. , Plotnikov Evgenii V. , Quinn Mark T.
Published: August 2022

The c-Jun N-terminal kinases (JNKs) regulate many physiological processes, including inflammatory responses, morphogenesis, cell proliferation, differentiation, survival, and cell death. Therefore, JNKs represent attractive targets for therapeutic intervention. In an effort to develop improved JNK inhibitors, we synthesized the lithium salt of 11H-indeno[1,2-b]quinoxaline-11-one oxime (IQ-1L) and evaluated its affinity for JNK and biological activity in vitro and in vivo. According to density functional theory (DFT) modeling, the Li+ ion stabilizes the six-membered ring with the 11H-indeno[1,2-b]quinoxaline-11-one (IQ-1) oximate better than Na+. Molecular docking showed that the Z isomer of the IQ-1 oximate should bind JNK1 and JNK3 better than (E)-IQ-1. Indeed, experimental analysis showed that IQ-1L exhibited higher JNK1-3 binding affinity in comparison with IQ-1S. IQ-1L also was a more effective inhibitor of lipopolysaccharide (LPS)-induced nuclear factor-κB/activating protein 1 (NF-κB/AP-1) transcriptional activity in THP-1Blue monocytes and was a potent inhibitor of proinflammatory cytokine production by MonoMac-6 monocytic cells. In addition, IQ-1L inhibited LPS-induced c-Jun phosphorylation in MonoMac-6 cells, directly confirming JNK inhibition. In a rat model of focal cerebral ischemia (FCI), intraperitoneal injections of 12 mg/kg IQ-1L led to significant neuroprotective effects, decreasing total neurological deficit scores by 28, 29, and 32% at 4, 24, and 48 h after FCI, respectively, and reducing infarct size by 52% at 48 h after FCI. The therapeutic efficacy of 12 mg/kg IQ-1L was comparable to that observed with 25 mg/kg of IQ-1S, indicating that complexation with Li+ improved efficacy of this compound. We conclude that IQ-1L is more effective than IQ-1S in treating cerebral ischemia injury and thus represents a promising anti-inflammatory compound.
Primary Cortical Cell Tri-Culture-Based Screening of Neuroinflammatory Response in Toll-like Receptor Activation
Authors: Goshi Noah , Kim Hyehyun , Seker Erkin
Published: August 2022

The activation of toll-like receptors (TLRs) in the central nervous system (CNS) can lead to neuroinflammation and contribute to many neurological disorders, including autoimmune diseases. Cell culture models are powerful tools for studying specific molecular and cellular mechanisms that contribute to these disease states and identifying potential therapeutics. However, most cell culture models have limitations in capturing biologically relevant phenomena, due in part to the non-inclusion of necessary cell types. Neurons, astrocytes, and microglia (critical cell types that play a role in neuroinflammation) all express at least a subset of TLRs. However, the response of each of these cell types to various TLR activation, along with their relative contribution to neuroinflammatory processes, is far from clear. In this study, we demonstrate the screening capabilities of a primary cortical cell tri-culture of neuron, astrocyte, and microglia from neonatal rats. Specifically, we compare the neuroinflammatory response of tri-cultures to that of primary neuron-astrocyte co-cultures to a suite of known TLR agonists. We demonstrate that microglia are required for observation of neurotoxic neuroinflammatory responses, such as increased cell death and apoptosis, in response to TLR2, 3, 4, and 7/8 activation. Additionally, we show that following TLR3 agonist treatment, microglia and astrocytes play opposing roles in the neuroinflammatory response, and that the observed response is dictated by the degree of TLR3 activation. Overall, we demonstrate that microglia play a significant role in the neuroinflammatory response to TLR activation in vitro and, hence, the tri-culture has the potential to serve as a screening platform that better replicates the in vivo responses.
Disposable Electrochemical Biosensor Based on the Inhibition of Alkaline Phosphatase Encapsulated in Acrylamide Hydrogels
Authors: Alacid Yolanda , Quintero Jaime Andrés F. , Martínez-Tomé María José , Mateo C. Reyes , Montilla Francisco
Published: August 2022

The present work describes the development of an easy-to-use portable electrochemical biosensor based on alkaline phosphatase (ALP) as a recognition element, which has been immobilized in acrylamide-based hydrogels prepared through a green protocol over disposable screen-printed electrodes. To carry out the electrochemical transduction, an electroinactive substrate (hydroquinone diphosphate) was used in the presence of the enzyme and then it was hydrolyzed to an electroactive species (hydroquinone). The activity of the protein within the matrix was determined voltammetrically. Due to the adhesive properties of the hydrogel, this was easily deposited on the surface of the electrodes, greatly increasing the sensitivity of the biosensor. The device was optimized to allow the determination of phosphate ion, a competitive inhibitor of ALP, in aqueous media. Our study provides a proof-of-concept demonstrating the potential use of the developed biosensor for in situ, real-time measurement of water pollutants that act as ALP inhibitors.
Regulation of Microglia-Activation-Mediated Neuroinflammation to Ameliorate Ischemia-Reperfusion Injury via the STAT5-NF-κB Pathway in Ischemic Stroke
Authors: Pu Zhijun , Xia Shengnan , Shao Pengfei , Bao Xinyu , Wu Dan , Xu Yun
Published: August 2022

Inflammatory reaction after ischemia-reperfusion contributes significantly to a worsened prognosis, and microglia activation is the main resource of inflammation in the nervous system. Targeting STAT5 has been shown to be a highly effective anti-inflammatory therapy; however, the mechanism by which the STAT5 signaling pathway regulates neuroinflammation following brain injury induced by ischemia-reperfusion remains unclear. Dauricine is an effective agent in anti-inflammation and neuroprotection, but the mechanism by which dauricine acts in ischemia-reperfusion remained unknown. This study is the first to find that the anti-inflammation mechanism of dauricine mainly occurs through the STAT5-NF-κB pathway and that it might act as a STAT5 inhibitor. Dauricine suppresses the inflammation caused by cytokines Eotaxin, KC, TNF-α, IL-1α, IL-1β, IL-6, IL-12β, and IL-17α, as well as inhibiting microglia activation. The STAT5b mutant at Tyr-699 reverses the protective effect of dauricine on the oxygen-glucose deprivation-reperfusion injury of neurons and reactivates the P-NF-κB expression in microglia. These results suggest that dauricine might be able to suppress the neuroinflammation and protect the neurons from the injury of post-ischemia-reperfusion injury via mediating the microglia activation through the STAT5-NF-κB pathway. As a potential therapeutic target for neuroinflammation, STAT5 needs to be given further attention regarding its role in ischemic stroke.
Clinical Utility of Prostate Health Index for Diagnosis of Prostate Cancer in Patients with PI-RADS 3 Lesions
Authors: Lee Chung-Un , Lee Sang-Min , Chung Jae-Hoon , Kang Minyong , Sung Hyun-Hwan , Jeon Hwang-Gyun , Jeong Byong-Chang , Seo Seong-Il , Jeon Seong-Soo , Lee Hyun-Moo , Song Wan
Published: August 2022

The risk of prostate cancer (PCa) in prostate imaging reporting and data system version 2 (PI-RADSv2) score-3 lesions is equivocal; it is regarded as an intermediate status of presented PCa. In this study, we evaluated the clinical utility of the prostate health index (PHI) for the diagnosis of PCa and clinically significant PCa (csPCa) in patients with PI-RADSv2 score-3 lesions. The study cohort included patients who underwent a transrectal ultrasound (TRUS)-guided, cognitive-targeted biopsy for PI-RADSv2 score-3 lesions between November 2018 and April 2021. Before prostate biopsy, the prostate-specific antigen (PSA) derivatives, such as total PSA (tPSA), [-2] proPSA (p2PSA) and free PSA (fPSA) were determined. The calculation equation of PHI is as follows: [(p2PSA/fPSA) × tPSA ½]. Using a receiver operating characteristic (ROC) curve analysis, the values of PSA derivatives measured by the area under the ROC curve (AUC) were compared. For this study, csPCa was defined as Gleason grade 2 or higher. Of the 392 patients with PI-RADSv2 score-3 lesions, PCa was confirmed in 121 (30.9%) patients, including 59 (15.1%) confirmed to have csPCa. Of all the PSA derivatives, PHI and PSA density (PSAD) showed better performance in predicting overall PCa and csPCa, compared with PSA (all p < 0.05). The AUC of the PHI for predicting overall PCa and csPCa were 0.807 (95% confidence interval (CI): 0.710–0.906, p = 0.001) and 0.819 (95% CI: 0.723–0.922, p < 0.001), respectively. By the threshold of 30, PHI was 91.7% sensitive and 46.1% specific for overall PCa, and was 100% sensitive for csPCa. Using 30 as a threshold for PHI, 34.4% of unnecessary biopsies could have been avoided, at the cost of 8.3% of overall PCa, but would include all csPCa.
Detection and Characterization of Circulating Tumor Cells Using Imaging Flow Cytometry—A Perspective Study
Authors: Muchlińska Anna , Smentoch Julia , Żaczek Anna J. , Bednarz-Knoll Natalia
Published: August 2022

Tumor dissemination is one of the most-investigated steps of tumor progression, which in recent decades led to the rapid development of liquid biopsy aiming to analyze circulating tumor cells (CTCs), extracellular vesicles (EVs), and circulating nucleic acids in order to precisely diagnose and monitor cancer patients. Flow cytometry was considered as a method to detect CTCs; however, due to the lack of verification of the investigated cells’ identity, this method failed to reach clinical utility. Meanwhile, imaging flow cytometry combining the sensitivity and high throughput of flow cytometry and image-based detailed analysis through a high-resolution microscope might open a new avenue in CTC technologies and provide an open-platform system alternative to CellSearch®, which is still the only gold standard in this field. Hereby, we shortly review the studies on the usage of flow cytometry in CTC identification and present our own representative images of CTCs envisioned by imaging flow cytometry providing rationale that this novel technology might be a good tool for studying tumor dissemination, and, if combined with a high CTC yield enrichment method, could upgrade CTC-based diagnostics.
Peripheral Inflammatory Indexes Neutrophil/Lymphocyte Ratio (NLR) and Red Cell Distribution Width (RDW) as Prognostic Biomarkers in Advanced Solitary Fibrous Tumour (SFT) Treated with Pazopanib
Authors: Hidalgo-Ríos Samuel , Carrillo-García Jaime , Moura David , Stacchiotti Silvia , López-Pousa Antonio , Redondo Andrés , Italiano Antoine , Gutiérrez Antonio , Grignani Giovanni , Hindi Nadia , López-Guerrero José-Antonio , Muro Xavier , Trufero Javier , Palmerini Emanuela , García Ana , Bernabeu Daniel , Le Cesne Axel , Casali Paolo , Blay Jean-Yves , Cruz Jurado Josefina , Martin-Broto Javier
Published: August 2022

Pazopanib was assessed prospectively in the GEIS-32 phase II study (NCT02066285) on advanced solitary fibrous tumour (SFT), resulting in a longer progression-free survival (PFS) and overall survival (OS) compared with historical controls treated with chemotherapy. A retrospective analysis of peripheral inflammatory indexes in patients enrolled into GEIS-32 was performed to evaluate their prognostic and predictive value. Patients received pazopanib 800 mg/day as the first antiangiogenic line. The impacts of baseline neutrophil/lymphocyte ratio (NLR), platelet/lymphocyte ratio (PLR), and red cell distribution width (RDW) on PFS, OS, and Choi response were evaluated by univariate and multivariate analysis. Metastasis-free interval (MFI), mitotic count, and ECOG were also included as potential prognostic factors. Sixty-seven SFT patients, enrolled in this study, showed a median age of 63 years and a female/male distribution of 57/43. The median follow-up from treatment initiation was 16.8 months. High baseline NLR, PLR, and standardised RDW were significantly associated with worse PFS and OS. NLR, RDW, MFI, and mitotic count were independent variables for PFS, while RDW and ECOG were independent for OS. Further, NLR and mitotic count were independent factors for Choi response. High baseline NLR and RDW values were independent prognostic biomarkers for worse outcome in advanced SFT patients treated with pazopanib.
Mutant p53 Depletion by Novel Inhibitors for HSP40/J-Domain Proteins Derived from the Natural Compound Plumbagin
Authors: Alalem Mohamed , Bhosale Mrinalini , Ranjan Atul , Yamamoto Satomi , Kaida Atsushi , Nishikawa Shigeto , Parrales Alejandro , Farooki Sana , Anant Shrikant , Padhye Subhash , Iwakuma Tomoo
Published: August 2022

Accumulation of missense mutant p53 (mutp53) in cancers promotes malignant progression. DNAJA1, a member of HSP40 (also known as J-domain proteins: JDPs), is shown to prevent misfolded or conformational mutp53 from proteasomal degradation. Given frequent addiction of cancers to oncogenic mutp53, depleting mutp53 by DNAJA1 inhibition is a promising approach for cancer therapy. However, there is no clinically available inhibitor for DNAJA1. Our in silico molecular docking study with a natural compound-derived small molecule library identified a plumbagin derivative, PLIHZ (plumbagin–isoniazid analog), as a potential compound binding to the J domain of DNAJA1. PLIHZ efficiently reduced the levels of DNAJA1 and several conformational mutp53 with minimal impact on DNA contact mutp53 and wild-type p53 (wtp53). An analog, called PLTFBH, which showed a similar activity to PLIHZ in reducing DNAJA1 and mutp53 levels, inhibited migration of cancer cells specifically carrying conformational mutp53, but not DNA contact mutp53, p53 null, and wtp53, which was attenuated by depletion of DNAJA1 or mutp53. Moreover, PLTFBH reduced levels of multiple other HSP40/JDPs with tyrosine 7 (Y7) and/or tyrosine 8 (Y8) but failed to deplete DNAJA1 mutants with alanine substitution of these amino acids. Our study suggests PLTFBH as a potential inhibitor for multiple HSP40/JDPs.
Cancerous Tumor Controlled Treatment Using Search Heuristic (GA)-Based Sliding Mode and Synergetic Controller
Authors: Subhan Fazal , Aziz Muhammad Adnan , Khan Inam Ullah , Fayaz Muhammad , Wozniak Marcin , Shafi Jana , Ijaz Muhammad Fazal
Published: August 2022

Cancerous tumor cells divide uncontrollably, which results in either tumor or harm to the immune system of the body. Due to the destructive effects of chemotherapy, optimal medications are needed. Therefore, possible treatment methods should be controlled to maintain the constant/continuous dose for affecting the spreading of cancerous tumor cells. Rapid growth of cells is classified into primary and secondary types. In giving a proper response, the immune system plays an important role. This is considered a natural process while fighting against tumors. In recent days, achieving a better method to treat tumors is the prime focus of researchers. Mathematical modeling of tumors uses combined immune, vaccine, and chemotherapies to check performance stability. In this research paper, mathematical modeling is utilized with reference to cancerous tumor growth, the immune system, and normal cells, which are directly affected by the process of chemotherapy. This paper presents novel techniques, which include Bernstein polynomial (BSP) with genetic algorithm (GA), sliding mode controller (SMC), and synergetic control (SC), for giving a possible solution to the cancerous tumor cells (CCs) model. Through GA, random population is generated to evaluate fitness. SMC is used for the continuous exponential dose of chemotherapy to reduce CCs in about forty-five days. In addition, error function consists of five cases that include normal cells (NCs), immune cells (ICs), CCs, and chemotherapy. Furthermore, the drug control process is explained in all the cases. In simulation results, utilizing SC has completely eliminated CCs in nearly five days. The proposed approach reduces CCs as early as possible.
Evaluation of Angiogenesis in an Acellular Porous Biomaterial Based on Polyhydroxybutyrate and Chitosan Using the Chicken Ex Ovo Chorioallantoic Membrane Model
Authors: Demcisakova Zuzana , Luptakova Lenka , Tirpakova Zuzana , Kvasilova Alena , Medvecky Lubomir , De Spiegelaere Ward , Petrovova Eva
Published: August 2022

The chorioallantoic membrane (CAM) is a highly vascularized avian extraembryonic membrane widely used as an in vivo model to study angiogenesis and its inhibition in response to tissues, cells, or soluble factors. In recent years, the use of CAM has become an integral part of the biocompatibility testing process for developing biomaterials intended for regenerative strategies and tissue engineering applications. In this study, we used the chicken ex ovo CAM assay to investigate the angiogenic potential of innovative acellular biopolymer polyhydroxybutyrate/chitosan (PHB/CHIT) scaffold, which is intended for the treatment of hard tissue defects, depending on treatment with pro- and anti-angiogenic substances. On embryonic day (ED) 7, the experimental biomaterials were placed on the CAM alone or soaked in vascular endothelial growth factor (VEGF-A), saline solution (PHY), or tyrosine kinase inhibitor (SU5402). After 72 h, the formation of vessels was analyzed in the surrounding area of the scaffold and inside the pores of the implants, using markers of embryonic endothelium (WGA, SNA), myofibroblasts (α-SMA), and macrophages (KUL-01). The morphological and histochemical analysis showed strong angiogenic potential of untreated scaffolds without additional effect of the angiogenic factor, VEGF-A. The lowest angiogenic potential was observed in scaffolds soaked with SU5402. Gene expression of pro-angiogenic growth factors, i.e., VEGF-A, ANG-2, and VE-CAD, was upregulated in untreated scaffolds after 72 h, indicating a pro-angiogenic environment. We concluded that the PHB/CHIT has a strong endogenous angiogenic potential and could be promising biomaterial for the treatment of hard tissue defects.
Quartz Crystal Microbalance Measurement of Histidine-Rich Glycoprotein and Stanniocalcin-2 Binding to Each Other and to Inflammatory Cells
Authors: Persson Skare Tor , Kaito Hiroshi , Durall Claudia , Aastrup Teodor , Claesson-Welsh Lena
Published: August 2022

The plasma protein histidine-rich glycoprotein (HRG) is implicated in the polarization of macrophages to an M1 antitumoral phenotype. The broadly expressed secreted protein stanniocalcin 2 (STC2), also implicated in tumor inflammation, is an HRG interaction partner. With the aim to biochemically characterize the HRG and STC2 complex, binding of recombinant HRG and STC2 preparations to each other and to cells was explored using the quartz crystal microbalance (QCM) methodology. The functionality of recombinant proteins was tested in a phagocytosis assay, where HRG increased phagocytosis by monocytic U937 cells while STC2 suppressed HRG-induced phagocytosis. The binding of HRG to STC2, measured using QCM, showed an affinity between the proteins in the nanomolar range, and both HRG and STC2 bound individually and in combination to vitamin D3-treated, differentiated U937 monocytes. HRG, but not STC2, also bound to formaldehyde-fixed U937 cells irrespective of their differentiation stage in part through the interaction with heparan sulfate. These data show that HRG and STC2 bind to each other as well as to U937 monocytes with high affinity, supporting the relevance of these interactions in monocyte/macrophage polarity.
Update on the Molecular Aspects and Methods Underlying the Complex Architecture of FSHD
Authors: Caputo Valerio , Megalizzi Domenica , Fabrizio Carlo , Termine Andrea , Colantoni Luca , Caltagirone Carlo , Giardina Emiliano , Cascella Raffaella , Strafella Claudia
Published: August 2022

Despite the knowledge of the main mechanisms involved in facioscapulohumeral muscular dystrophy (FSHD), the high heterogeneity and variable penetrance of the disease complicate the diagnosis, characterization and genotype–phenotype correlation of patients and families, raising the need for further research and data. Thus, the present review provides an update of the main molecular aspects underlying the complex architecture of FSHD, including the genetic factors (related to D4Z4 repeated units and FSHD-associated genes), epigenetic elements (D4Z4 methylation status, non-coding RNAs and high-order chromatin interactions) and gene expression profiles (FSHD transcriptome signatures both at bulk tissue and single-cell level). In addition, the review will also describe the methods currently available for investigating the above-mentioned features and how the resulting data may be combined with artificial-intelligence-based pipelines, with the purpose of developing a multifunctional tool tailored to enhancing the knowledge of disease pathophysiology and progression and fostering the research for novel treatment strategies, as well as clinically useful biomarkers. In conclusion, the present review highlights how FSHD should be regarded as a disease characterized by a molecular spectrum of genetic and epigenetic factors, whose alteration plays a differential role in DUX4 repression and, subsequently, contributes to determining the FSHD phenotype.
The CDK1-Related lncRNA and CXCL8 Mediated Immune Resistance in Lung Adenocarcinoma
Authors: Xue Jinmin , Song Yang , Xu Wenwen , Zhu Yuxi
Published: August 2022

Background: Limited therapeutic options are available for advanced LUAD without driver gene mutations. Anti-CDK therapy has shown effectiveness in several kind of cancers, however, the mechanisms still need to be elucidated. Materials and Methods: The lncRNA associated with CDK1 and the immunomodulatory factors that regulate CDK1 were found by bioinformatics analysis and experimental verification. The prognostic model and immune resistance mechanism of lung adenocarcinoma were revealed by single cell analysis, immune infiltration analysis, and signal pathway analysis. Results: LINC00261 was found to be an important CDK1-related lncRNA with a better prognosis in LUAD. In addition, high CDK1 expression indicates a poor immunotherapy response, which may be associated with overexpression of CXCL8. CXCL8 decreased in patients who were immunotherapy-responsive but increased in patients who were immunotherapy-resistant. Signaling pathway analysis suggested that increased CXCL8 and decreased LINC00261 may participate in hypoxia-induced tumor angiogenesis and cause a poor prognosis for the patients. CXCL8 and CDK1 may change G2-M transformation and EMT and promote tumor proliferation. Conclusion: This study explained that LINC00261, CDK1, and CXCL8 may have a mutual regulation relationship, which affects the occurrence of LUAD and the efficacy of immunotherapy.
Retinal Ganglion Cells: Global Number, Density and Vulnerability to Glaucomatous Injury in Common Laboratory Mice
Authors: Claes Marie , Moons Lieve
Published: August 2022

How many RBPMS+ retinal ganglion cells (RGCs) does a standard C57BL/6 laboratory mouse have on average and is this number substrain- or sex-dependent? Do RGCs of (European) C57BL/6J and -N mice show a different intrinsic vulnerability upon glaucomatous injury? Global RGC numbers and densities of common laboratory mice were previously determined via axon counts, retrograde tracing or BRN3A immunohistochemistry. Here, we report the global RGC number and density by exploiting the freely available tool RGCode to automatically count RGC numbers and densities on entire retinal wholemounts immunostained for the pan-RGC marker RBPMS. The intrinsic vulnerability of RGCs from different substrains to glaucomatous injury was evaluated upon introduction of the microbead occlusion model, followed by RBPMS counts, retrograde tracing and electroretinography five weeks post-injury. We demonstrate that the global RGC number and density varies between substrains, yet is not sex-dependent. C57BL/6J mice have on average 46K ± 2K RBPMS+ RGCs per retina, representing a global RGC density of 3268 ± 177 RGCs/mm2. C57BL/6N mice, on the other hand, have on average less RBPMS+ RGCs (41K ± 3K RGCs) and a lower density (3018 ± 189 RGCs/mm2). The vulnerability of the RGC population of the two C57BL/6 substrains to glaucomatous injury did, however, not differ in any of the interrogated parameters.
Cryostorage of Mesenchymal Stem Cells and Biomedical Cell-Based Products
Authors: Linkova Daria D. , Rubtsova Yulia P. , Egorikhina Marfa N.
Published: August 2022

Mesenchymal stem cells (MSCs) manifest vast opportunities for clinical use due both to their ability for self-renewal and for effecting paracrine therapeutic benefits. At the same time, difficulties with non-recurrent generation of large numbers of cells due to the necessity for long-term MSC expansion ex vivo, or the requirement for repeated sampling of biological material from a patient significantly limits the current use of MSCs in clinical practice. One solution to these problems entails the creation of a biobank using cell cryopreservation technology. This review is aimed at analyzing and classifying literature data related to the development of protocols for the cryopreservation of various types of MSCs and tissue-engineered structures. The materials in the review show that the existing techniques and protocols for MSC cryopreservation are very diverse, which significantly complicates standardization of the entire process. Here, the selection of cryoprotectors and of cryoprotective media shows the greatest variability. Currently, it is the cryopreservation of cell suspensions that has been studied most extensively, whereas there are very few studies in the literature on the freezing of intact tissues or of tissue-engineered structures. However, even now it is possible to develop general recommendations to optimize the cryopreservation process, making it less traumatic for cells.
Relationships between Functional Movement Quality and Sprint and Jump Performance in Female Youth Soccer Athletes of Team China
Authors: Zhang Junjie , Lin Junlei , Wei Hongwen , Liu Haiyuan
Published: August 2022

This study aimed to determine the optimal functional movement screen (FMS) cut score for assessing the risk of sport injury, and to investigate the correlations between functional movement quality and sprint and jump performance. Twenty-four (N = 24) athletes performed all tests in one day at 10–30 min intervals, and the FMS test was performed first, without a warm-up session. After a standard warm-up, athletes then completed the Y-balance Test (YBT), sprint, counter-movement jump (CMJ), and standing long jump (SLJ), in turn. For each test, the best of three attempts was recorded for further analysis. A receiver operating characteristic (ROC) curve and area-under-the-curve (AUC) were used to determine the optimal FMS cut score for assessing the risk of sport injuries, and Spearman’s rank correlation analysis was used to quantify associations between functional movement scores and athletic performance. The average FMS score was 16.2 and the optimal FMS cut score for assessing the risk of sport injuries was 14.5. There were moderate relationships between total FMS score and 10–20 m sprint time (r = −0.46, p < 0.05), between In-line Lunge and 0–20 m sprint time (r = −0.47, p < 0.05), between Shoulder Mobility and 0–10 m sprint time (r = −0.48, p < 0.05), and between Trunk-stability Push-up and 10–20 m sprint time (r = −0.47, p < 0.05). Moreover, Hurdle Step score was largely correlated with 0–10 m time (r = −0.51, p < 0.05). For Y-balance, moderate correlations were observed between CMJ height and anterior asymmetry score (r = −0.47, p < 0.05) and posteromedial asymmetry score (r = −0.44, p < 0.05). However, there were no significant associations between YBT performance (asymmetric in three directions and composite score) and sprint performance (p > 0.05). Taken together, the results indicate that a FMS score of 14 is not a gold standard for assessing the risk of injury in all populations; we recommend that the FMS cut score of 14.5 should be the optimal score for assessing risk of injury in young female elite soccer players. Moreover, the FMS and YBT were introduced to assess the quality of functional movements, and they cannot be used to assess sprint and jump performance. Practitioners can use components of the FMS that have similar characteristics to specific sports to assess athletic performance.
Stability Study of Baclofen in an Oral Powder Form Compounded for Pediatric Patients in Japan
Authors: Saito Jumpei , Hanawa Takehisa , Ozawa Ayuna , Matsumoto Takahiro , Yoshikawa Nozomi , Harada Tsutomu , Iwahashi Kana , Yamatani Akimasa
Published: August 2022

Baclofen is used as a skeletal muscle relaxant for multiple sclerosis patients and pediatric patients with cerebral palsy and is prescribed to pediatric patients at 0.3 to 1.0 mg/kg/dose. Baclofen tablets, an oral drug, are usually administered as a powder in pediatric wards after a formulation change by the pharmacist. However, there is no information about stability and assurance of quality for compounded products. The purpose of this study was to design a 10 mg/g oral powder of baclofen and to investigate the stability and changes in the physical properties of this compounded product. A 10 mg/g baclofen powder was prepared by adding extra-fine crystal lactose hydrate to crushed and filtrated baclofen tablets and was stored in a polycarbonate amber bottle with desiccant or in a coated paper laminated with cellophane and polyethylene. The stability of baclofen at 25 ± 2 °C/60 ± 5%RH was tested for 120 days in ‘bottle (closed)’, ‘bottle (in use)’, and ‘laminated’ storage conditions. Baclofen concentrations ranged from 90.0% to 110.0% of the initial concentration under all storage conditions. No crystallographic or dissolution changes were observed after storage. This information can help with the management of baclofen compounded powder in pharmacies.
Magnussonite, Mn2+18 (As3+O3)6Mn1+x(H2O, Clx, ☐): Re-Examination of the Structure and the [Mn1+(As3+O3)6] Cluster
Authors: Hawthorne Frank C. , Hughes John M. , Ma Chi
Published: August 2022

The crystal structure of magnussonite, ideally Mn2+18[As3+6(Mn1+x)O18]2[(H2O, Clx, ☐) (H2O, ☐)]2, from Långban, Sweden, was refined to an R1-index of 1.19% and the structure proposed by Moore and Araki (1979) is confirmed. Magnussonite has a densely packed structure of (Mnφn) polyhedra, φ = (O2−, H2O, Cl−), and (As3+O3) triangular pyramids that is best envisaged as layers of polyhedra in the same way as many of the other manganese-arsenite-arsenate structures from Långban. There are two distinct layers in magnussonite; the two layers may be combined into a slab that stacks along the a-direction with rotations between adjacent slabs. A surprising feature of the dense-packed magnussonite atomic arrangement is an array of structural channels along [111] that contain much of the disorder that occurs in the magnussonite structure. The channels contain the partly occupied MX site on the central axis of the channel, and the CLW2 site (with extremely low occupancy), also on the central axis of the channel. The CLW2 site, previously unrecognized in the magnussonite structure, contains H2O, whereas the minor Cl in the structure resides in the CLW1 channel site, balancing the charge of the MX-site occupant. The MX site on the central axis of the channels displays a coordination known only in Långban minerals. In the local arrangement around the unoccupied MX site, the neighboring (As3+O3) groups project their associated stereoactive lone-pairs of electrons into the channel. Where the MX site is occupied by Mn, there are six lone-pairs of electrons pointing toward Mn; the 18-electron rule predicts/rationalizes formulae for this stable transition-metal cluster. The (As3+O3) groups and MX occupant form a [Mn+(As3+O3)6] arrangement in accord with the 18-electron rule where Mn+ contributes 6 3d electrons and the six lone-pairs of the [(As3+O3)6] arrangement contribute 12 electrons for a total of 18 electrons that form nine molecular orbitals that are metal-ligand bonds or non-bonding. Magnussonite and dixenite, another basic manganese-iron arsenate-arsenite-silicate mineral of the Långban-type deposits in Bergslagen, Sweden, are the only two minerals known with such local [M+(As3+O3)n] transition-metal clusters. The presence of these exotic clusters in structures containing densely packed Mn2+ octahedra is not understood at present.
Range-Wide Conservation Efforts for the Critically Endangered Atlantic Humpback Dolphin (Sousa teuszii)
Authors: Minton Gianna , Abel Grant , Collins Tim , Eniang Edem , Frisch-Nwakanma Heidrun , Keith-Diagne Lucy , Kema Kema Judicael Regis , Takoukam Kamla Aristide , Virtue Melanie , Weir Caroline , Reeves Randall
Published: August 2022

The Atlantic humpback dolphin (Sousa teuszii) is a critically endangered cetacean species endemic to coastal Atlantic waters of Africa. Its preference for shallow coastal habitat renders it vulnerable to incidental capture (bycatch) in non-selective fishing gears as well as to habitat degradation from all forms of coastal development. Although past and ongoing research has shed light on the distribution and conservation status of the species in a few locations, it is still poorly understood throughout most of the 19 countries in its 7000 km long range. From 2020 onward, international and regional collaboration to increase awareness and promote conservation action has intensified. These efforts, while in the early stages, exemplify the IUCN Species Survival Commission’s Assess-Plan-Act Conservation Cycle. While concrete conservation gains have not yet been achieved, efforts are being made to fill knowledge gaps and to broaden and motivate the network of international, regional, national, and local stakeholders that are actively engaged in marine and coastal conservation actions at multiple levels. The authors assess the strengths and weaknesses of the current approaches and identify elements that may be useful for other species with ranges spanning multiple countries where resources and capacity for conservation action are limited.
Karst Ecosystems of Middle Timan, Russia: Soils, Plant Communities, and Soil Oribatid Mites
Authors: Melekhina Elena N. , Kanev Vladimir A. , Deneva Svetlana V.
Published: August 2022

Oribatid mites are distinguished by high taxonomic diversity and abundance in almost all natural zones; they are used as an indicator group of microarthropods in the study of natural landscapes and anthropogenically disturbed ecosystems. In the karst landscapes of the North, the oribatid mites are very poorly studied. The aim of this study was to investigate the diversity of soil types, plant communities, and oribatid mites in karst relief forms in the conditions of the northern taiga forests. The material was collected in July 2020 in the karst landscapes of Timan Ridge, found in the European northeast of Russia. The research sites were located in the profile of the karst crater and in the profile of the slope in the Ukhta River Valley. A sedge wetland community, and pine–bilberry–green-moss forest, located in the depression between glacial hills and uplands were also examined. A total of seven sites were examined. Geobotanical descriptions were made by standard methods, descriptions of the soil profile, and samples of the soil microfauna; 12 in each site were collected. A total of 51 oribatid mite species from 39 genera and 31 families were found. The highest taxonomic diversity of oribatids was noted in forest phytocenoses located in the upper part of the karst crater slope, the lower part of the karst crater slope, and on rock outcrops in the lower part of the slope in Ukhta river valley. Ordination of the oribatid mite community by NMDS method showed the association of sites S3, S4, and S5 located on the slope of the karst crater in one group, and sites S6 and S7 located on a slope in the Ukhta River Valley, as well as S2 (pine–bilberry–green-moss forest located in the depression between glacial hills and uplands), in another group. The swamp community was located separately from other communities. Species of oribatid mites, which created the specifics of each community, were noted. The specifics of the population of oribatid mites of karst landscapes were that along with the features of fauna, characteristic for zonal north-taiga forests (the predominance of polyzonal widespread species) were found the “conditionally southern” species, the main area of distribution of which is located in lower latitudes. The study provides the basis for future studies of poorly known oribatid mites of karst landscapes of Northern Europe.
Recognition of Vehicles Entering Expressway Service Areas and Estimation of Dwell Time Using ETC Data
Authors: Cai Qiqin , Yi Dingrong , Zou Fumin , Zhou Zhaoyi , Li Nan , Guo Feng
Published: August 2022

To scientifically and effectively evaluate the service capacity of expressway service areas (ESAs) and improve the management level of ESAs, we propose a method for the recognition of vehicles entering ESAs (VeESAs) and estimation of vehicle dwell times using electronic toll collection (ETC) data. First, the ETC data and their advantages are described in detail, and then the cleaning rules are designed according to the characteristics of the ETC data. Second, we established feature engineering according to the characteristics of VeESA and proposed the XGBoost-based VeESA recognition (VR-XGBoost) model. Studied the driving rules in depth, we constructed a kinematics-based vehicle dwell time estimation (K-VDTE) model. The field validation in Part A/B of Yangli ESA using real ETC transaction data demonstrates that the effectiveness of our proposal outperforms the current state-of-the-art. Specifically, in Part A and Part B, the recognition accuracies of VR-XGBoost are 95.9% and 97.4%, respectively, the mean absolute errors (MAEs) of dwell time are 52 and 14 s, respectively, and the root mean square errors (RMSEs) are 69 and 22 s, respectively. In addition, the confidence level of controlling the MAE of dwell time within 2 min is more than 97%. This work can effectively recognize the VeESA and accurately estimate the dwell time, which can provide a reference idea and theoretical basis for the service capacity evaluation and layout optimization of the ESA.