bluuebunny/crossref_metadata_2025 huggingface dataset:
Evidence for a dyadic motor plan in joint action
Authors: Sacheli Lucia Maria , Arcangeli Elisa , Paulesu Eraldo
Published: March 2018

What mechanisms distinguish interactive from non-interactive actions? To answer this question we tested participants while they took turns playing music with a virtual partner: in the interactive joint action condition, the participants played a melody together with their partner by grasping (C note) or pressing (G note) a cube-shaped instrument, alternating in playing one note each. In the non-interactive control condition, players’ behavior was not guided by a shared melody, so that the partner’s actions and notes were irrelevant to the participant. In both conditions, the participant’s and partner’s actions were physically congruent (e.g., grasp-grasp) or incongruent (e.g., grasp-point), and the partner’s association between actions and notes was coherent with the participant’s or reversed. Performance in the non-interactive condition was only affected by physical incongruence, whereas joint action was only affected when the partner’s action-note associations were reversed. This shows that task interactivity shapes the sensorimotor coding of others’ behaviors, and that joint action is based on active prediction of the partner’s action effects rather than on passive action imitation. We suggest that such predictions are based on Dyadic Motor Plans that represent both the agent’s and the partner’s contributions to the interaction goal, like playing a melody together.
How Semantic Radicals in Chinese characters Facilitate Hierarchical Category-Based Induction
Authors: Wang Xiaoxi , Ma Xie , Tao Yun , Tao Yachen , Li Hong
Published: March 2018

Prior studies indicate that the semantic radical in Chinese characters contains category information that can support the independent retrieval of category information through the lexical network to the conceptual network. Inductive reasoning relies on category information; thus, semantic radicals may influence inductive reasoning. As most natural concepts are hierarchically structured in the human brain, this study examined how semantic radicals impact inductive reasoning for hierarchical concepts. The study used animal and plant nouns, organized in basic, superordinate, and subordinate levels; half had a semantic radical and half did not. Eighteen participants completed an inductive reasoning task. Behavioural and event-related potential (ERP) data were collected. The behavioural results showed that participants reacted faster and more accurately in the with-semantic-radical condition than in the without-semantic-radical condition. For the ERPs, differences between the conditions were found, and these differences lasted from the very early cognitive processing stage (i.e., the N1 time window) to the relatively late processing stages (i.e., the N400 and LPC time windows). Semantic radicals can help to distinguish the hierarchies earlier (in the N400 period) than characters without a semantic radical (in the LPC period). These results provide electrophysiological evidence that semantic radicals may improve sensitivity to distinguish between hierarchical concepts.
Fungal spore diversity reflects substrate-specific deposition challenges
Authors: Calhim Sara , Halme Panu , Petersen Jens H. , Læssøe Thomas , Bässler Claus , Heilmann-Clausen Jacob
Published: March 2018

Sexual spores are important for the dispersal and population dynamics of fungi. They show remarkable morphological diversity, but the underlying forces driving spore evolution are poorly known. We investigated whether trophic status and substrate associations are associated with morphology in 787 macrofungal genera. We show that both spore size and ornamentation are associated with trophic specialization, so that large and ornamented spores are more probable in ectomycorrhizal than in saprotrophic genera. This suggests that spore ornamentation facilitates attachment to arthropod vectors, which ectomycorrhizal species may need to reach lower soil layers. Elongated spore shapes are more common in saprotrophic taxa, and genera associated with above ground substrates are more likely to have allantoid (curved elongated) spores, probably to lower the risk of wash out by precipitation. Overall, our results suggest that safe arrival on specific substrates is a more important driver of evolution in spore morphology than dispersal per se.
α2A-adrenergic blockade attenuates septic cardiomyopathy by increasing cardiac norepinephrine concentration and inhibiting cardiac endothelial activation
Authors: Yu Xiaohui , Wang Yuan , Yang Duomeng , Tang Xiangxu , Li Hongmei , Lv Xiuxiu , Qi Renbin , Hu Chaofeng , Lu Daxiang , Lv Ben , Wang Huadong
Published: March 2018

Cardiomyopathy is a common complication associated with increased mortality in sepsis, but lacks specific therapy. Here, using genetic and pharmacological approaches, we explored the therapeutic effect of α2A-adrenergic receptor (AR) blockade on septic cardiomyopathy. CLP-induced septic rats were treated with BRL44408 (α2A-AR antagonist), prazosin (α1-AR antagonist) and/or reserpine. CLP-induced cardiomyopathy, indicated by reduced dP/dt and increased cardiac troponin I phosphorylation, was attenuated by BRL44408, this was associated with reduced cardiac TNF-α and endothelial VCAM-1 expression, cardiomyocyte apoptosis and related signal molecule phosphorylation. BRL44408 increased cardiac norepinephrine (NE) concentration in CLP rats. Pretreatment with reserpine that exhausts cardiac NE without affecting the circulating NE concentration or with prazosin partially abolished the cardioprotection of BRL44408 and reversed its inhibitory effects on myocardial TNF-α, apoptosis and related signal molecule phosphorylation, but not on VCAM-1 expression in septic rats. These effects of BRL44408 were confirmed by α2A-AR gene deletion in septic mice. Furthermore, α2-AR agonist not only enhanced LPS-induced TNF-α and VCAM-1 expression in cardiac endothelial cells that express α2A-AR, but also enhanced LPS-induced cardiac dysfunction in isolated rat hearts. Our data indicate that α2A-AR blockade attenuates septic cardiomyopathy by promoting cardiac NE release that activates myocardial α1-AR and suppressing cardiac endothelial activation.
Double deletion of tetraspanins CD9 and CD81 in mice leads to a syndrome resembling accelerated aging
Authors: Jin Yingji , Takeda Yoshito , Kondo Yasushi , Tripathi Lokesh P. , Kang Sujin , Takeshita Hikari , Kuhara Hanako , Maeda Yohei , Higashiguchi Masayoshi , Miyake Kotaro , Morimura Osamu , Koba Taro , Hayama Yoshitomo , Koyama Shohei , Nakanishi Kaori , Iwasaki Takeo , Tetsumoto Satoshi , Tsujino Kazuyuki , Kuroyama Muneyoshi , Iwahori Kota , Hirata Haruhiko , Takimoto Takayuki , Suzuki Mayumi , Nagatomo Izumi , Sugimoto Ken , Fujii Yuta , Kida Hiroshi , Mizuguchi Kenji , Ito Mari , Kijima Takashi , Rakugi Hiromi , Mekada Eisuke , Tachibana Isao , Kumanogoh Atsushi
Published: March 2018

Chronic obstructive pulmonary disease (COPD) has been recently characterized as a disease of accelerated lung aging, but the mechanism remains unclear. Tetraspanins have emerged as key players in malignancy and inflammatory diseases. Here, we found that CD9/CD81 double knockout (DKO) mice with a COPD-like phenotype progressively developed a syndrome resembling human aging, including cataracts, hair loss, and atrophy of various organs, including thymus, muscle, and testis, resulting in shorter survival than wild-type (WT) mice. Consistent with this, DNA microarray analysis of DKO mouse lungs revealed differential expression of genes involved in cell death, inflammation, and the sirtuin-1 (SIRT1) pathway. Accordingly, expression of SIRT1 was reduced in DKO mouse lungs. Importantly, siRNA knockdown of CD9 and CD81 in lung epithelial cells additively decreased SIRT1 and Foxo3a expression, but reciprocally upregulated the expression of p21 and p53, leading to reduced cell proliferation and elevated apoptosis. Furthermore, deletion of these tetraspanins increased the expression of pro-inflammatory genes and IL-8. Hence, CD9 and CD81 might coordinately prevent senescence and inflammation, partly by maintaining SIRT1 expression. Altogether, CD9/CD81 DKO mice represent a novel model for both COPD and accelerated senescence.
Nitrogen uptake kinetics and saltmarsh plant responses to global change
Authors: Cott Grace M. , Caplan Joshua S. , Mozdzer Thomas J.
Published: March 2018

Coastal wetlands are important carbon sinks globally, but their ability to store carbon hinges on their nitrogen (N) supply and N uptake dynamics of dominant plant species. In terrestrial ecosystems, uptake of nitrate (NO3−) and ammonium (NH4+) through roots can strongly influence N acquisition rates and their responses to environmental factors such as rising atmospheric CO2and eutrophication. We examined the15N uptake kinetics of three dominant plant species in North American coastal wetlands (Spartina patens, C4grass;Phragmites australis, C3grass;Schoenoplectus americanus, C3sedge) under ambient and elevated CO2conditions. We further related our results to the productivity response of these species in two long-term field experiments.S. patenshad the greatest uptake rates for NO3−and NH4+under ambient conditions, suggesting that N uptake kinetics may underlie its strong productivity response to N in the field. Elevated CO2increased NH4+and NO3−uptake rates forS. patens, but had negative effects on NO3−uptake rates inP. australisand no effects onS. americanus. We suggest that N uptake kinetics may explain differences in plant community composition in coastal wetlands and that CO2-induced shifts, in combination with N proliferation, could alter ecosystem-scale productivity patterns of saltmarshes globally.
Trends in stroke subtypes and vascular risk factors in a stroke center in China over 10 years
Authors: Tian Danyang , Yang Qiong , Dong Quan , Li Nan , Yan Bernard , Fan Dongsheng
Published: March 2018

Rapid economic development in China has caused marked changes in people’s lifestyles and medical technology. Exploration of stroke subtype trends is necessary to provide physicians with vital insight for early diagnosis and treatment. We included stroke patients admitted from 2006 to 2015. Trends in stroke subtypes and vascular risk factors were investigated. There were 5521 patients, including 4534 (82.1%) ischemic stroke (IS), 813 (14.7%) intracerebral hemorrhage (ICH) and 174 (3.2%) subarachnoid hemorrhage (SAH) patients. The proportion of IS was increasing and proportions of ICH and SAH were decreasing (P < 0.001). Onset age and hypertension remained stable in stroke subtypes. In IS patients, large artery atherosclerosis (LAA) strokes increased from 17.0% to 30.8% in the first 7 years and ultimately decreased to 24.1%. Small vessel disease (SVD) strokes increased from 15.5% to 39.6%, undetermined etiology (UE) strokes decreased from 52.7% to 26.0%, others remained stable. The levels of low-density lipoprotein declined significantly, and an increased number of patients underwent intracranial artery examinations (P < 0.001). In conclusion, proportions of stroke subtypes changed significantly. Anti-hypertension therapy needs to be reinforced to control ICH, SAH and SVD ischemic stroke incidences. The etiologic detection of IS increased and lipid-lowing therapy was effective, cardioembolism detections should be reinforced.
A Critical Domain of Ebolavirus Envelope Glycoprotein Determines Glycoform and Infectivity
Authors: Fujihira Haruhiko , Usami Katsuaki , Matsuno Keita , Takeuchi Hideyuki , Denda-Nagai Kaori , Furukawa Jun-ichi , Shinohara Yasuro , Takada Ayato , Kawaoka Yoshihiro , Irimura Tatsuro
Published: March 2018

Ebolaviruses comprises 5 species that exert varying degrees of mortality/infectivity in humans with Reston ebolaviruses (REBOV) showing the lowest and Zaire ebolaviruses (ZEBOV) showing the highest. However, the molecular basis of this differential mortality/infectivity remains unclear. Here, we report that the structural features of ebolavirus envelope glycoproteins (GPs) and one of their counter receptors, macrophage galactose-type calcium-type lectin (MGL/CD301), play crucial roles in determining viral infectivity. The low infectivity of REBOV mediated by the interaction between GPs and MGL/CD301 dramatically increased when the N-terminal 18 amino acids (33rd through 50th) of GPs were replaced with that of ZEBOV. Furthermore, structural analysis of glycans of GPs revealed thatN-glycans were more extended in REBOV than in ZEBOV.N-glycan extension was reversed by the replacement of aforementioned N-terminal 18 amino acid residues. Therefore, these data strongly suggest that extendedN-glycans on GPs reduce MGL/CD301-mediated viral infectivity by hindering the interaction between GPs and MGL/CD301 preferentially bindsO-glycans.
Interfacial Hydrolysis of Acetals on Protonated TEMPO-oxidized Cellulose Nanofibers
Authors: Tamura Yuya , Kanomata Kyohei , Kitaoka Takuya
Published: March 2018

2,2,6,6-Tetramethylpiperidine-1-oxyl (TEMPO)-oxidized cellulose nanofibers (TOCNs), which have a high-density of exposed carboxylic acid groups on their crystalline surfaces, effectively act as acid catalysts in acetal hydrolysis. Carboxy-free cellulose nanofibers, polymeric carboxylic acids, and homogeneous acetic acid do not show significant catalytic activity under the same reaction conditions. Mercerized TOCNs differing from the original TOCNs in a crystalline structure were also ineffective, which suggests that the unique nanoarchitectural features of TOCNs, such as regularly aligned carboxylic acid groups, large specific surface areas, and structural rigidity, must be major factors in the acceleration of acetal hydrolysis. Kinetic analysis suggested that substrates and/or acid catalyst species were concentrated on the TOCN crystalline surfaces, which significantly enhanced the catalytic activity.
Exact results of the limited penetrable horizontal visibility graph associated to random time series and its application
Authors: Wang Minggang , Vilela André L. M. , Du Ruijin , Zhao Longfeng , Dong Gaogao , Tian Lixin , Stanley H. Eugene
Published: March 2018

The limited penetrable horizontal visibility algorithm is an analysis tool that maps time series into complex networks and is a further development of the horizontal visibility algorithm. This paper presents exact results on the topological properties of the limited penetrable horizontal visibility graph associated with independent and identically distributed (i:i:d:) random series. We show that the i.i.d: random series maps on a limited penetrable horizontal visibility graph with exponential degree distribution, independent of the probability distribution from which the series was generated. We deduce the exact expressions of mean degree and clustering coefficient, demonstrate the long distance visibility property of the graph and perform numerical simulations to test the accuracy of our theoretical results. We then use the algorithm in several deterministic chaotic series, such as the logistic map, H´enon map, Lorenz system, energy price chaotic system and the real crude oil price. Our results show that the limited penetrable horizontal visibility algorithm is efficient to discriminate chaos from uncorrelated randomness and is able to measure the global evolution characteristics of the real time series.
Drivers of solar radiation variability in the McMurdo Dry Valleys, Antarctica
Authors: Obryk M. K. , Fountain A. G. , Doran P. T. , Lyons W. B. , Eastman R.
Published: March 2018

Annually averaged solar radiation in the McMurdo Dry Valleys, Antarctica has varied by over 20 W m−2 during the past three decades; however, the drivers of this variability are unknown. Because small differences in radiation are important to water availability and ecosystem functioning in polar deserts, determining the causes are important to predictions of future desert processes. We examine the potential drivers of solar variability and systematically eliminate all but stratospheric sulfur dioxide. We argue that increases in stratospheric sulfur dioxide increase stratospheric aerosol optical depth and decrease solar intensity. Because of the polar location of the McMurdo Dry Valleys (77–78°S) and relatively long solar ray path through the stratosphere, terrestrial solar intensity is sensitive to small differences in stratospheric transmissivity. Important sources of sulfur dioxide include natural (wildfires and volcanic eruptions) and anthropogenic emission.
Antioxidant and prebiotic activity of five peonidin-based anthocyanins extracted from purple sweet potato (Ipomoea batatas (L.) Lam.)
Authors: Sun Hanju , Zhang Pingping , Zhu Yongsheng , Lou Qiuyan , He Shudong
Published: March 2018

Twelve kinds of anthocyanins from the Chinese purple sweet potato cultivar (Ipomoea batatas (L.) Lam.) were extracted and identified using LC-MS/MS, which had a high content of peonidin-based anthocyanins. Five peonidin-based anthocyanin monomers (P1, P2, P3, P4 and P5) were isolated by preparative liquid chromatography with structural analyses using an Impact II Q-TOF MS/MS. Then, the functional properties of the anthocyanin monomers, such as the antioxidant activities, proliferative effects on probiotics, and their inhibition on harmful bacteria in vitro, were investigated. The peonidin-based components in purple sweet potato anthocyanins (PSPAs) showed good properties regarding scavenging 1,1-diphenyl-2-picrylhydrazyl (DPPH) radicals and superoxide anions, and had good potential in reducing the total power activity and Fe2+ chelating ability. While the order of the antioxidant abilities was as follows: P4 > P5 > P3 > P2 > P1 > PSPAs. Microbial cultivations showed that P1, P2, P3, P4, P5 and PSPAs could induce the proliferation of Bifidobacterium bifidum, Bifidobacterium adolescentis, Bifidobacterium infantis and Lactobacillus acidophilus, and they inhibited the growth of Staphylococcus aureus and Salmonella typhimurium, suggesting the anthocyanins might have prebiotic-like activity through the modulation of the intestinal microbiota. Our results indicate that peonidin-based anthocyanins could be further utilized in health foods and pharmaceutical developments.
Conical Refraction Bottle Beams for Entrapment of Absorbing Droplets
Authors: Esseling Michael , Alpmann Christina , Schnelle Jens , Meissner Robert , Denz Cornelia
Published: March 2018

Conical refraction (CR) optical bottle beams for photophoretic trapping of airborne absorbing droplets are introduced and experimentally demonstrated. CR describes the circular split-up of unpolarised light propagating along an optical axis in a biaxial crystal. The diverging and converging cones lend themselves to the construction of optical bottle beams with flexible entry points. The interaction of single inkjet droplets with an open or partly open bottle beam is shown implementing high-speed video microscopy in a dual-view configuration. Perpendicular image planes are visualized on a single camera chip to characterize the integral three-dimensional movement dynamics of droplets. We demonstrate how a partly opened optical bottle transversely confines liquid objects. Furthermore we observe and analyse transverse oscillations of absorbing droplets as they hit the inner walls and simultaneously measure both transverse and axial velocity components.
Biological characterization of Aedes albopictus (Diptera: Culicidae) in Argentina: implications for arbovirus transmission
Authors: Chuchuy Ailen , Rodriguero Marcela S. , Ferrari Walter , Ciota Alexander T. , Kramer Laura D. , Micieli María V.
Published: March 2018

Aedes albopictus (Diptera: Culicidae) is an invasive mosquito, native to Asia, that has expanded its range worldwide. It is considered to be a public health threat as it is a competent vector of viruses of medical importance, including dengue, chikungunya, and Zika. Despite its medical importance there is almost no information on biologically important traits of Ae. albopictus in Argentina. We studied life cycle traits, demographic parameters and analyzed the competence of this mosquito as a virus vector. In addition, we determined the prevalence of Wolbachia strains in Ae. albopictus as a first approach to investigate the potential role of this bacteria in modulating vector competence for arboviruses. We observed low hatch rates of eggs, which led to a negative growth rate. We found that Ae. albopictus individuals were infected with Wolbachia in the F1 but while standard superinfection with wAlbA and wAlbB types was found in 66.7% of the females, 16.7% of the females and 62.5% of the males were single-infected with the wAlbB strain. Finally, despite high levels of infection and dissemination, particularly for chikungunya virus, Ae. albopictus from subtropical Argentina were found to be relatively inefficient vectors for transmission of both chikungunya and dengue viruses.
Tibial Osteotomy as a Mechanical Model of Primary Osteoarthritis in Rats
Authors: Britzman David , Igah Ibidumo , Eftaxiopoulou Theofano , Macdonald Warren , Bull Anthony M. J.
Published: March 2018

This study has presented the first purely biomechanical surgical model of osteoarthritis (OA) in rats, which could be more representative of the human primary disease than intra-articular techniques published previously. A surgical tibial osteotomy (TO) was used to induce degenerative cartilage changes in the medial knee of Sprague-Dawley rats. The presence of osteoarthritic changes in the medial knee compartment of the operated animals was evaluated histologically and through analysis of serum carboxy-terminal telepeptides of type II collagen (CTX-II). In-vivo biomechanical analyses were carried out using a musculoskeletal model of the rat hindlimb to evaluate the loading conditions in the knee pre and post-surgically. Qualitative and quantitative medial cartilage degeneration consistent with OA was found in the knees of the operated animals alongside elevated CTX-II levels and increased tibial compressive loading. The potential avoidance of joint inflammation post-surgically, the maintenance of internal joint biomechanics and the ability to quantify the alterations in joint loading should make this model of OA a better candidate for modeling primary forms of the disease in humans.
An advanced human in vitro co-culture model for translocation studies across the placental barrier
Authors: Aengenheister Leonie , Keevend Kerda , Muoth Carina , Schönenberger René , Diener Liliane , Wick Peter , Buerki-Thurnherr Tina
Published: March 2018

Although various drugs, environmental pollutants and nanoparticles (NP) can cross the human placental barrier and may harm the developing fetus, knowledge on predictive placental transfer rates and the underlying transport pathways is mostly lacking. Current available in vitro placental transfer models are often inappropriate for translocation studies of macromolecules or NPs and do not consider barrier function of placental endothelial cells (EC). Therefore, we developed a human placental in vitro co-culture transfer model with tight layers of trophoblasts (BeWo b30) and placental microvascular ECs (HPEC-A2) on a low-absorbing, 3 µm porous membrane. Translocation studies with four model substances and two polystyrene (PS) NPs across the individual and co-culture layers revealed that for most of these compounds, the trophoblast and the EC layer both demonstrate similar, but not additive, retention capacity. Only the paracellular marker Na-F was substantially more retained by the BeWo layer. Furthermore, simple shaking, which is often applied to mimic placental perfusion, did not alter translocation kinetics compared to static exposure. In conclusion, we developed a novel placental co-culture model, which provides predictive values for translocation of a broad variety of molecules and NPs and enables valuable mechanistic investigations on cell type-specific placental barrier function.
Stage-Rocked Electron Channeling for Crystal Orientation Mapping
Authors: Hujsak Karl A. , Myers Benjamin D. , Grovogui Jann , Dravid Vinayak P.
Published: March 2018

Microstructural analysis by crystal orientation mapping of bulk functional materials is an essential and routine operation in the engineering of material properties. Far and away the most successfully employed technique, Electron Backscattered Diffraction (EBSD), provides high spatial resolution information at the cost of limited angular resolution and a distorted imaging condition. In this work, we demonstrate a stage-rocked electron channeling approach as a low-cost orientation mapping alternative to EBSD. This is accomplished by automated electron channeling contrast imaging (ECCI) as the microscope stage physically tilts/rotates a sample through a reduced hemisphere of orientations followed by computational reconstruction of electron channeling patterns (ECP). Referred to as Orientation Mapping by Electron Channeling (OMEC), our method offers advantages in terms of local defect analysis, as it combines the advantages of selected area ECP (SACP) and ECCI. We also illustrate dynamic or “adaptive” sampling schemes to increase the throughput of the technique. Finally, we discuss the implications for sample analysis in which large 3D maps of ECCI images can be routinely constructed of challenging crystalline samples. As an electron channeling-based approach to orientation mapping, OMEC may open new routes to characterize crystalline materials with high angular and spatial resolution.
Ocimum flavone Orientin as a countermeasure for thrombocytopenia
Authors: Yadav Marshleen , Song Feifei , Huang Jason , Chakravarti Arnab , Jacob Naduparambil K.
Published: March 2018

Thrombocytopenia or chronic depletion of platelets in blood, could create life-threatening conditions in patients who receive aggressive systemic radiation and chemotherapy. Currently there are no approved agents for the rapid treatment of thrombocytopenia. In the present study, we demonstrate that administration of Orientin, a glycosidic flavonoid or dietary administration of Orientin containing Tulsi (Holy Basil) leaves, results in a significant increase in circulating platelets in a clinically relevant mouse model. No noticeable effects were observed on red blood cells, white blood cells or other hematologic parameters in treated animals indicating that Orientin specificity enhances platelet formation. The gene expression and immunophenotyping of bone marrow revealed that Orientin stimulates megakaryopoiesis specific transcriptional program. A significant increase in colony formation in bone marrow cells from Orientin pretreated mice further complemented the effect of Orientin on progenitor cells. The ex-vivo differentiation of irradiated human peripheral blood CD34+ stem cells demonstrated stimulatory effects of Orientin on megakaryocyte erythrocyte progenitors (MEP). The results show that Orientin, a non-toxic readily available natural product can counter platelet imbalances. Thrombocytopenia also develop as a consequence of multiple hematologic malignancies and side effects of treatments. Dietary supplementation of Orientin containing phytochemicals could be effective as countermeasures and viable therapeutics.
Intramolecular 13C analysis of tree rings provides multiple plant ecophysiology signals covering decades
Authors: Wieloch Thomas , Ehlers Ina , Yu Jun , Frank David , Grabner Michael , Gessler Arthur , Schleucher Jürgen
Published: March 2018

Measurements of carbon isotope contents of plant organic matter provide important information in diverse fields such as plant breeding, ecophysiology, biogeochemistry and paleoclimatology. They are currently based on13C/12C ratios of specific, whole metabolites, but we show here that intramolecular ratios provide higher resolution information. In the glucose units of tree-ring cellulose of 12 tree species, we detected large differences in13C/12C ratios (>10‰) among carbon atoms, which provide isotopically distinct inputs to major global C pools, including wood and soil organic matter. Thus, considering position-specific differences can improve characterisation of soil-to-atmosphere carbon fluxes and soil metabolism. In aPinus nigratree-ring archive formed from 1961 to 1995, we found novel13C signals, and show that intramolecular analysis enables more comprehensive and precise signal extraction from tree rings, and thus higher resolution reconstruction of plants’ responses to climate change. Moreover, we propose an ecophysiological mechanism for the introduction of a13C signal, which links an environmental shift to the triggered metabolic shift and its intramolecular13C signature. In conclusion, intramolecular13C analyses can provide valuable new information about long-term metabolic dynamics for numerous applications.
Rapid and damage-free outgassing of implanted helium from amorphous silicon oxycarbide
Authors: Su Qing , Ding Hepeng , Price Lloyd , Shao Lin , Hinks Jonathan A. , Greaves Graeme , Donnelly Stephen E. , Demkowicz Michael J. , Nastasi Michael
Published: March 2018

Damage caused by implanted helium (He) is a major concern for material performance in future nuclear reactors. We use a combination of experiments and modeling to demonstrate that amorphous silicon oxycarbide (SiOC) is immune to He-induced damage. By contrast with other solids, where implanted He becomes immobilized in nanometer-scale precipitates, He in SiOC remains in solution and outgasses from the material via atomic-scale diffusion without damaging its free surfaces. Furthermore, the behavior of He in SiOC is not sensitive to the exact concentration of carbon and hydrogen in this material, indicating that the composition of SiOC may be tuned to optimize other properties without compromising resistance to implanted He.
Loss of IDH2 Accelerates Age-related Hearing Loss in Male Mice
Authors: White Karessa , Kim Mi-Jung , Han Chul , Park Hyo-Jin , Ding Dalian , Boyd Kevin , Walker Logan , Linser Paul , Meneses Zaimary , Slade Cole , Hirst Jonathan , Santostefano Katherine , Terada Naohiro , Miyakawa Takuya , Tanokura Masaru , Salvi Richard , Someya Shinichi
Published: March 2018

Isocitrate dehydrogenase (IDH) 2 participates in the TCA cycle and catalyzes the conversion of isocitrate to α-ketoglutarate and NADP+ to NADPH. In the mitochondria, IDH2 also plays a key role in protecting mitochondrial components from oxidative stress by supplying NADPH to both glutathione reductase (GSR) and thioredoxin reductase 2 (TXNRD2). Here, we report that loss of Idh2 accelerates age-related hearing loss, the most common form of hearing impairment, in male mice. This was accompanied by increased oxidative DNA damage, increased apoptotic cell death, and profound loss of spiral ganglion neurons and hair cells in the cochlea of 24-month-old Idh2−/− mice. In young male mice, loss of Idh2 resulted in decreased NADPH redox state and decreased activity of TXNRD2 in the mitochondria of the inner ear. In HEI-OC1 mouse inner ear cell lines, knockdown of Idh2 resulted in a decline in cell viability and mitochondrial oxygen consumption. This was accompanied by decreased NADPH redox state and decreased activity of TXNRD2 in the mitochondria of the HEI-OC1 cells. Therefore, IDH2 functions as the principal source of NADPH for the mitochondrial thioredoxin antioxidant defense and plays an essential role in protecting hair cells and neurons against oxidative stress in the cochlea of male mice.
Voriconazole-induced photocarcinogenesis is promoted by aryl hydrocarbon receptor-dependent COX-2 upregulation
Authors: Ikeya Shigeki , Sakabe Jun-ichi , Yamada Takahiro , Naito Takafumi , Tokura Yoshiki
Published: March 2018

Voriconazole (VRCZ) induces the development of UV-associated skin cancers. The mechanism underlying the VRCZ-induced carcinogenesis has been largely unknown. Here, we showed that VRCZ metabolites plus UVA generated reactive oxygen species and resultant DNA damage of the epidermis, but did not induce substantial apoptosis in human keratinocytes (KCs). Furthermore, VRCZ per se stimulates aryl hydrocarbon receptor (AhR) and upregulates COX-2, which is a pivotal enzyme for the promotion of UV-associated tumors, in an AhR-ARNT dependent manner of the classical (genomic) pathway. Our findings suggest that the phototoxic moieties of VRCZ metabolites may participate in the initiation phase of VRCZ skin cancer, while VRCZ per se promotes the tumor development. Therefore, during VRCZ therapy, sun exposure protection is essential to prevent photocarcinogenesis caused by VRCZ metabolites plus UV. Chemoprevention with selective COX-2 inhibitors may be helpful to repress the development of skin cancers derived from DNA-damaged KCs.
Semi-Automated Biomarker Discovery from Pharmacodynamic Effects on EEG in ADHD Rodent Models
Authors: Yokota Tatsuya , Struzik Zbigniew R. , Jurica Peter , Horiuchi Masahito , Hiroyama Shuichi , Li Junhua , Takahara Yuji , Ogawa Koichi , Nishitomi Kohei , Hasegawa Minoru , Cichocki Andrzej
Published: March 2018

We propose a novel semi-automatic approach to design biomarkers for capturing pharmacodynamic effects induced by pharmacological agents on the spectral power of electroencephalography (EEG) recordings. We apply this methodology to investigate the pharmacodynamic effects of methylphenidate (MPH) and atomoxetine (ATX) on attention deficit/hyperactivity disorder (ADHD), using rodent models. We inject the two agents into the spontaneously hypertensive rat (SHR) model of ADHD, the Wistar-Kyoto rat (WKY), and the Wistar rat (WIS), and record their EEG patterns. To assess individual EEG patterns quantitatively, we use an integrated methodological approach, which consists of calculating the mean, slope and intercept parameters of temporal records of EEG spectral power using a smoothing filter, outlier truncation, and linear regression. We apply Fisher discriminant analysis (FDA) to identify dominant discriminants to be heuristically consolidated into several new composite biomarkers. Results of the analysis of variance (ANOVA) and t-test show benefits in pharmacodynamic parameters, especially the slope parameter. Composite biomarker evaluation confirms their validity for genetic model stratification and the effects of the pharmacological agents used. The methodology proposed is of generic use as an approach to investigating thoroughly the dynamics of the EEG spectral power.
Geographical variation of diabetic emergencies attended by prehospital Emergency Medical Services is associated with measures of ethnicity and socioeconomic status
Authors: Villani Melanie , Earnest Arul , Smith Karen , de Courten Barbora , Zoungas Sophia
Published: March 2018

Geographical variation of diabetic emergencies attended by prehospital emergency medical services (EMS) and the relationship between area-level social and demographic factors and risk of a diabetic emergency were examined. All cases of hypoglycaemia and hyperglycaemia attended by Ambulance Victoria between 1/01/2009 and 31/12/2015 were tabulated by Local Government Area (LGA). Conditional autoregressive models were used to create smoothed maps of age and gender standardised incidence ratio (SIR) of prehospital EMS attendance for a diabetic emergency. Spatial regression models were used to examine the relationship between risk of a diabetic emergency and area-level factors. The areas with the greatest risk of prehospital EMS attendance for a diabetic emergency were disperse. Area-level factors associated with risk of a prehospital EMS-attended diabetic emergency were socioeconomic status (SIR 0.70 95% CrI [0.51, 0.96]), proportion of overseas-born residents (SIR 2.02 95% CrI [1.37, 2.91]) and motor vehicle access (SIR 1.47 95% CrI [1.08, 1.99]). Recognition of areas of increased risk of prehospital EMS-attended diabetic emergencies may be used to assist prehospital EMS resource planning to meet increased need. In addition, identification of associated factors can be used to target preventative interventions tailored to individual regions to reduce demand.
A cross-species judgement bias task: integrating active trial initiation into a spatial Go/No-go task
Authors: Hintze Sara , Melotti Luca , Colosio Simona , Bailoo Jeremy D. , Boada-Saña Maria , Würbel Hanno , Murphy Eimear
Published: March 2018

Judgement bias tasks are promising tools to assess emotional valence in animals, however current designs are often time-consuming and lack aspects of validity. This study aimed to establish an improved design that addresses these issues and can be used across species. Horses, rats, and mice were trained on a spatial Go/No-go task where animals could initiate each trial. The location of an open goal-box, at either end of a row of five goal-boxes, signalled either reward (positive trial) or non-reward (negative trial). Animals first learned to approach the goal-box in positive trials (Go) and to re-initiate/not approach in negative trials (No-go). Animals were then tested for responses to ambiguous trials where goal-boxes at intermediate locations were opened. The Go:No-go response ratio was used as a measure of judgement bias. Most animals quickly learned the Go/No-go discrimination and performed trials at a high rate compared to previous studies. Subjects of all species reliably discriminated between reference cues and ambiguous cues, demonstrating a monotonic graded response across the different cue locations, with no evidence of learning about the outcome of ambiguous trials. This novel test protocol is an important step towards a practical task for comparative studies on judgement biases in animals.
Magnetic domain interactions of Fe3O4 nanoparticles embedded in a SiO2 matrix
Authors: Fuentes-García J. A. , Diaz-Cano A. I. , Guillen-Cervantes A. , Santoyo-Salazar J.
Published: March 2018

Currently, superparamagnetic functionalized systems of magnetite (Fe3O4) nanoparticles (NPs) are promising options for applications in hyperthermia therapy, drug delivery and diagnosis. Fe3O4 NPs below 20 nm have stable single domains (SSD), which can be oriented by magnetic field application. Dispersion of Fe3O4 NPs in silicon dioxide (SiO2) matrix allows local SSD response with uniaxial anisotropy and orientation to easy axis, 90° <001> or 180° <111>. A successful, easy methodology to produce Fe3O4 NPs (6–17 nm) has been used with the Stöber modification. NPs were embedded in amorphous and biocompatible SiO2 matrix by mechanical stirring in citrate and tetraethyl orthosilicate (TEOS). Fe3O4 NPs dispersion was sampled in the range of 2–12 h to observe the SiO2 matrix formation as time function. TEM characterization identified optimal conditions at 4 h stirring for separation of SSD Fe3O4 in SiO2 matrix. Low magnetization (Ms) of 0.001 emu and a coercivity (Hc) of 24.75 Oe indicate that the embedded SSD Fe3O4 in amorphous SiO2 reduces the Ms by a diamagnetic barrier. Magnetic force microscopy (MFM) showed SSD Fe3O4 of 1.2 nm on average embedded in SiO2 matrix with uniaxial anisotropy response according to Fe3+ and Fe2+ electron spin coupling and rotation by intrinsic Neél contribution.
Knowledge and self-reported practices of infection control among various occupational groups in a rural and an urban hospital in Vietnam
Authors: Lien La Thi Quynh , Chuc Nguyen Thi Kim , Hoa Nguyen Quynh , Lan Pham Thi , Thoa Nguyen Thi Minh , Riggi Emilia , Tamhankar Ashok J. , Stålsby Lundborg Cecilia
Published: March 2018

Staff practice, driven by knowledge, plays a decisive role in hospital infection control. This study aimed to assess and compare knowledge and self-reported practices of infection control among various occupational groups in a rural and an urban hospital in Vietnam. Questionnaires consisting of items on knowledge and practices were collected from 339 hospital staff with varying occupations. For analysis, total knowledge or practice score ranged from 0–15. Mood’s median test was performed to compare median scores. Post-hoc analysis of ordinal logistic regression models was applied to test differences in scores among occupational groups. The majority of hospital staff had good or adequate knowledge (median score: rural = 11.8; urban = 12), but the score range was wide (1.4–14.5). Self-reported practices in the urban hospital were likely to be better than in the rural one (p = 0.003). Self-reported practices yet not completely satisfactory, indicating the need for continuing professional development in both settings. Overall, cleaners had lower scores than both physicians and nurses, highlighting the need for tailored education in this topic. Future infection control strategies within the hospitals might want to assess the difference between the staff’s self-reported practice and their actual real practice. These findings can be of value in many other similar settings.
The electromagnetic wave energy effect(s) in microwave–assisted organic syntheses (MAOS)
Authors: Horikoshi Satoshi , Watanabe Tomoki , Narita Atsushi , Suzuki Yumiko , Serpone Nick
Published: March 2018

Organic reactions driven by microwaves have been subjected for several years to some enigmatic phenomenon referred to as the microwave effect, an effect often mentioned in microwave chemistry but seldom understood. We identify this microwave effect as an electromagnetic wave effect that influences many chemical reactions. In this article, we demonstrate its existence using three different types of microwave generators with dissimilar oscillation characteristics. We show that this effect is operative in photocatalyzed TiO2 reactions; it negatively influences electro-conductive catalyzed reactions, and yet has but a negligible effect on organic syntheses. The relationship between this electromagnetic wave effect and chemical reactions is elucidated from such energetic considerations as the photon energy and the reactions’ activation energies.
Prior Expectation Modulates Repetition Suppression without Perceptual Awareness
Authors: Barbosa Leonardo S. , Kouider Sid
Published: March 2018

Stimulus repetition induces attenuated brain responses. This phenomenon, termed repetition suppression (RS), is classically held to stem from bottom-up neuronal adaptation. However, recent studies suggest that RS is driven by top-down predictive mechanisms. It remains controversial whether these top-down mechanisms of RS rely on conscious strategies, or if they represent a more fundamental aspect of perception, coding for physical properties of the repeated feature. The presence of top-down effects in the absence of perceptual awareness would indicate that conscious strategies are not sufficient to explain top-down mechanisms of RS. We combined an unconscious priming paradigm with EEG recordings and tested whether RS can be modulated by the probability of encountering a repetition, even in the absence of awareness. Our results show that both behavioural priming and RS near occipital areas are modulated by repetition probability, regardless of prime awareness. This contradicts previous findings that have argued that RS modulation is a by-product of conscious strategies. In contrast, we found that the increase in theta-band power following unrepeated trials – an index of conflict detection – is modulated only by expectations during conscious primes, implicating the use of conscious strategies. Together, our results suggest that the influence of predictions on RS can be either automatic in sensory brain regions or dependent on conscious strategies.
Cultured bloodstream Trypanosoma brucei adapt to life without mitochondrial translation release factor 1
Authors: Procházková Michaela , Panicucci Brian , Zíková Alena
Published: March 2018

Trypanosoma brucei is an extracellular parasite that alternates between an insect vector (procyclic form) and the bloodstream of a mammalian host (bloodstream form). While it was previously reported that mitochondrial release factor 1 (TbMrf1) is essential in cultured procyclic form cells, we demonstrate here that in vitro bloodstream form cells can tolerate the elimination of TbMrf1. Therefore, we explored if this discrepancy is due to the unique bioenergetics of the parasite since procyclic form cells rely on oxidative phosphorylation; whereas bloodstream form cells utilize glycolysis for ATP production and FoF1-ATPase to maintain the essential mitochondrial membrane potential. The observed disruption of intact bloodstream form FoF1-ATPases serves as a proxy to indicate that the translation of its mitochondrially encoded subunit A6 is impaired without TbMrf1. While these null mutants have a decreased mitochondrial membrane potential, they have adapted by increasing their dependence on the electrogenic contributions of the ADP/ATP carrier to maintain the mitochondrial membrane potential above the minimum threshold required for T. brucei viability in vitro. However, this inefficient compensatory mechanism results in avirulent mutants in mice. Finally, the depletion of the codon-independent release factor TbPth4 in the TbMrf1 knockouts further exacerbates the characterized mitchondrial phenotypes.
Cellular response to persistent foot-and-mouth disease virus infection is linked to specific types of alterations in the host cell transcriptome
Authors: Han Lingling , Xin Xiu , Wang Hailong , Li Jiadai , Hao Yao , Wang Mingzhen , Zheng Congyi , Shen Chao
Published: March 2018

Food-and-mouth disease virus (FMDV) is a highly contagious virus that seriously threatens the development of animal husbandry. Although persistent FMDV infection can dramatically worsen the situation, the mechanisms involved in persistent FMDV infection remain unclear. In the present study, we identified the presence of evolved cells in the persistently FMDV-infected cell line. These cells exhibited resistance to the parent FMDV and re-established persistent infection when infected with FMDV-Op (virus supernatant of persistent infection cell lines), emphasizing the decisive role of evolved host cells in the establishment of persistent FMDV infection. Using RNA-seq, we identified the gene expression profiles of these evolved host cells. In total, 4,686 genes were differentially expressed in evolved cells compared with normal cells, with these genes being involved in metabolic processes, cell cycle, and cellular protein catabolic processes. In addition, 1,229 alternative splicing events, especially skipped exon events, were induced in evolved cells. Moreover, evolved cells exhibited a stronger immune defensive response and weaker MAPK signal response than normal cells. This comprehensive transcriptome analysis of evolved host cells lays the foundation for further investigations of the molecular mechanisms of persistent FMDV infection and screening for genes resistant to FMDV infection.
Mitochondrial fragmentation affects neither the sensitivity to TNFα-induced apoptosis of Brucella-infected cells nor the intracellular replication of the bacteria
Authors: Lobet Elodie , Willemart Kevin , Ninane Noëlle , Demazy Catherine , Sedzicki Jaroslaw , Lelubre Christophe , De Bolle Xavier , Renard Patricia , Raes Martine , Dehio Christoph , Letesson Jean-Jacques , Arnould Thierry
Published: March 2018

Mitochondria are complex organelles that participate in many cellular functions, ranging from ATP production to immune responses against viruses and bacteria. This integration of a plethora of functions within a single organelle makes mitochondria a very attractive target to manipulate for intracellular pathogens. We characterised the crosstalk that exists betweenBrucella abortus, the causative agent of brucellosis, and the mitochondria of infected cells.Brucellareplicates in a compartment derived from the endoplasmic reticulum (ER) and modulates ER functionality by activating the unfolded protein response. However, the impact ofBrucellaon the mitochondrial population of infected cells still requires a systematic study. We observed physical contacts betweenBrucellacontaining vacuoles and mitochondria. We also found thatB. abortusreplication is independent of mitochondrial oxidative phosphorylation and that mitochondrial reactive oxygen species do not participate to the control ofB. abortusinfectionin vitro. We demonstrated thatB. abortusandB. melitensisinduce a drastic mitochondrial fragmentation at 48 hours post-infection in different cell types, including myeloid and non-myeloid cells. This fragmentation is DRP1-independent and might be caused by a deficit of mitochondrial fusion. However, mitochondrial fragmentation does not change neitherBrucellareplication efficiency, nor the susceptibility of infected cells to TNFα-induced apoptosis.