bluuebunny/crossref_metadata_2025 huggingface dataset:
Physical Map of Repetitive DNA Sites in Brachiaria spp.: Intravarietal and Interspecific Polymorphisms
Authors: Nani Thaís Furtado , Pereira Daniele Laís , Souza Sobrinho Fausto , Techio Vânia Helena
Published: May 2016

Brachiaria (Trin.) Griseb. is a genus belonging to the Poaceae Barnh. family that aggregates species of forage interest, which have shown different levels of ploidy, intraspecific variability for chromosomal morphology and for number of rDNA sites. This study aimed at characterizing the karyotype of Brachiaria brizantha (Hochst. ex A. Rich) Stapf, Brachiaria decumbens Stapf, and Brachiaria ruziziensis R. Germ. & C.M. Evrard by the location of 5S rDNA, 45S rDNA, centromeric retrotransposons, chromomycin A3 (CMA) and 4′, 6‐diamidino‐2‐phenylindole dihydrochloride (DAPI) chromosome bands, and transcriptional activity at nucleolar organizing regions (NORs). Brachiaria ruziziensis has 2n = 2x = 18 chromosomes, karyotypic formula 9M, one 45S rDNA site, and two 5S rDNA sites. Brachiaria brizantha has 2n = 4x = 36 chromosomes, karyotypic formula 18M, four to six 5S rDNA signals, and two to four 45S rDNA sites. One of the chromosomes carrying 45S rDNA is heteromorphic. Brachiaria decumbens has 2n = 4x = 36 chromosomes, karyotypic formula 17M+1M/SM, and seven 5S rDNA signals including one hemizygous 5S rDNA locus. One of the two chromosome pairs carrying 45S rDNA signals was heteromorphic with one of its chromosomes possessing a tertiary constriction. Hybridization signals with a centromeric retrotransposon probe, CRM1, were observed in Brachiaria chromosomes with distinct clusters on all B. ruziziensis chromosomes. Chromosomal CMA bands were located along with 45S rDNA signals in B. decumbens and B. ruziziensis whereas in B. brizantha only two out of four signals coincided. The karyotype of Brachiaria species is symmetrical. The transcriptional activity of NORs is variable with two or three heteromorphic nucleoli.
Climate Change and the Emergent Epidemic of CKD from Heat Stress in Rural Communities: The Case for Heat Stress Nephropathy
Authors: Glaser Jason , Lemery Jay , Rajagopalan Balaji , Diaz Henry F. , García-Trabanino Ramón , Taduri Gangadhar , Madero Magdalena , Amarasinghe Mala , Abraham Georgi , Anutrakulchai Sirirat , Jha Vivekanand , Stenvinkel Peter , Roncal-Jimenez Carlos , Lanaspa Miguel A. , Correa-Rotter Ricardo , Sheikh-Hamad David , Burdmann Emmanuel A. , Andres-Hernando Ana , Milagres Tamara , Weiss Ilana , Kanbay Mehmet , Wesseling Catharina , Sánchez-Lozada Laura Gabriela , Johnson Richard J.
Published: May 2016

Climate change has led to significant rise of 0.8°C–0.9°C in global mean temperature over the last century and has been linked with significant increases in the frequency and severity of heat waves (extreme heat events). Climate change has also been increasingly connected to detrimental human health. One of the consequences of climate-related extreme heat exposure is dehydration and volume loss, leading to acute mortality from exacerbations of pre-existing chronic disease, as well as from outright heat exhaustion and heat stroke. Recent studies have also shown that recurrent heat exposure with physical exertion and inadequate hydration can lead to CKD that is distinct from that caused by diabetes, hypertension, or GN. Epidemics of CKD consistent with heat stress nephropathy are now occurring across the world. Here, we describe this disease, discuss the locations where it appears to be manifesting, link it with increasing temperatures, and discuss ongoing attempts to prevent the disease. Heat stress nephropathy may represent one of the first epidemics due to global warming. Government, industry, and health policy makers in the impacted regions should place greater emphasis on occupational and community interventions.
Mitigating Meal-Related Glycemic Excursions in an Insulin-Sparing Manner During Closed-Loop Insulin Delivery: The Beneficial Effects of Adjunctive Pramlintide and Liraglutide
Authors: Sherr Jennifer L. , Patel Neha S. , Michaud Camille I. , Palau-Collazo Miladys M. , Van Name Michelle A. , Tamborlane William V. , Cengiz Eda , Carria Lori R. , Tichy Eileen M. , Weinzimer Stuart A.
Published: May 2016

OBJECTIVE

Closed-loop (CL) insulin delivery effectively maintains glucose overnight but struggles when challenged with meals. Use of single-day, 30-μg/meal pramlintide lowers meal excursions during CL. We sought to further elucidate the potential benefits of adjunctive agents after 3–4 weeks of outpatient dose titration.

RESEARCH DESIGN AND METHODS

Two CL studies were conducted: one evaluating adjunctive pramlintide and the other liraglutide. Ten subjects (age 16–23 years; A1C 7.2 ± 0.6% [55 ± 6.6 mmol/mol]) completed two 24-h sessions: one on CL alone and one on CL plus 60-μg pramlintide (CL + P), after a 3–4-week outpatient dose escalation. Eleven subjects (age 18–27 years; A1C 7.5 ± 0.9% [58 ± 9.8 mmol/mol]) were studied before and after treatment with 1.8 mg liraglutide (CL + L) after a similar 3–4-week dose escalation period. Timing and content of meals during CL were identical within experiments; meals were not announced.

RESULTS

Pramlintide delayed the time to peak plasma glucose (PG) excursion (CL 1.6 ± 0.5 h vs. CL + P 2.6 ± 0.9 h, P < 0.001) with concomitant blunting of peak postprandial increments in PG (P < 0.0001) and reductions in postmeal incremental PG area under the curve (AUC) (P = 0.0002). CL + L also led to reductions in PG excursions (P = 0.05) and incremental PG AUC (P = 0.004), with a 28% reduction in prandial insulin delivery. Outpatient liraglutide therapy led to a weight loss of 3.2 ± 1.8 kg, with a 26% reduction in total daily insulin dose.

CONCLUSIONS

Adjunctive pramlintide and liraglutide treatment mitigated postprandial hyperglycemia during CL control; liraglutide demonstrated the additional benefit of weight loss in an insulin-sparing manner. Further investigations of these and other adjunctive agents in long-term outpatient CL studies are needed.
Utility of an Equine Clinical Skills Course: A Pilot Study
Authors: Christensen Bruce W. , Danielson Jared A.
Published: May 2016

Recent publications have revealed inadequacies in the veterinary training of future equine practitioners. To help address this problem, a 2-week Equine Clinical Skills course was designed and implemented to provide fourth-year veterinary students with opportunities to have hands-on experience with common equine clinical skills using live animals and cadavers. Alumni and employers of alumni were surveyed to determine whether or not students participating in the course were more competent performing clinical skills during their first year post-graduation than those who had not participated in the course. Students who participated in the course were also surveyed before and after completing the course to determine whether or not their self-assessed skills improved during the course. Alumni who had taken the course rated their ability to perform the clinical skills more highly than alumni who had not taken the course. Similarly, students participating in the course indicated that they were significantly more able to perform the clinical skills after the course than when it began. Employers did not indicate a difference between the clinical skills of those who had taken the course and those who had not. Because this study involved a limited number of respondents from one institution, further studies should be conducted to replicate these findings and determine their generalizability.
Biomechanical demands on posterior fusion instrumentation during lordosis restoration procedures
Authors: Kuo Calvin C. , Martin Audrey , Telles Connor , Leasure Jeremi , Iezza Alex , Ames Christopher , Kondrashov Dimitriy
Published: May 2016

OBJECTIVE

The goal of this study was to investigate the forces placed on posterior fusion instrumentation by 3 commonly used intraoperative techniques to restore lumbar lordosis: 1) cantilever bending; 2) in situ bending; and 3) compression and/or distraction of screws along posterior fusion rods.

METHODS

Five cadaveric torsos were instrumented with pedicle screws at the L1–5 levels. Specimens underwent each of the 3 lordosis restoration procedures. The pedicle screw pullout force was monitored in real time via strain gauges that were mounted unilaterally at each level. The degree of correction was noted through fluoroscopic imaging. The peak loads experienced on the screws during surgery, total demand on instrumentation, and resting loads after corrective maneuvers were measured.

RESULTS

A mean overall lordotic correction of 10.9 ± 4.7° was achieved. No statistically significant difference in lordotic correction was observed between restoration procedures. In situ bending imparted the largest loads intraoperatively with an average of 1060 ± 599.9 N, followed by compression/distraction (971 ± 534.1 N) and cantilever bending (705 ± 413.0 N). In situ bending produced the largest total demand and postoperative loads at L-1 (1879 ± 1064.1 and 487 ± 118.8 N, respectively), which were statistically higher than cantilever bending and compression/distraction (786 ± 272.1 and 138 ± 99.2 N, respectively).

CONCLUSIONS

In situ bending resulted in the highest mechanical demand on posterior lumbar instrumentation, as well as the largest postoperative loads at L-1. These results suggest that the forces generated with in situ bending indicate a greater chance of intraoperative instrumentation failure and postoperative proximal pedicle screw pullout when compared with cantilever bending and/or compression/distraction options. The results are aimed at optimizing correction and fusion strategies in lordosis restoration cases.
Mentorship: service, education, progress. The 2015 CNS Presidential Address
Authors: Selden Nathan R.
Published: May 2016

The theme of the 65th Annual Meeting of the Congress of Neurological Surgeons and the title of this presidential address focus on mentorship as a valuable service owed to the profession of neurological surgery by its members, a crucial tool for the education of new neurosurgeons, and a fundamental contributor to the progress of the specialty. The author explores the origin of the term “mentor” in Homeric tradition and the impact of mentorship on the historical legacy of neurological surgery. He outlines the role mentorship played in his own professional development, as well as the changing face of mentorship today due to increasing numbers of women in neurosurgery.

Many surgeons perceive modern educational approaches as threats to the tradition of personal mentorship in medicine. The author argues that intentional educational methods, such as the Society of Neurological Surgeons (SNS) “matrix” curriculum, the Accreditation Council for Graduate Medical Education “milestones,” and the SNS “boot camp” courses, each focus, enhance, and empower, but do not replace, personal mentorship. The author further describes the important role of mentorship in the definition, growth, and health of the specialty of neurological surgery and in the personal well-being and fulfillment of its practitioners.
Avoiding pullout complications in external ventricular drains: technical note
Authors: Velásquez Carlos , Rivero-Garvía Mónica , Mayorga-Buiza Maria Jose , Cañizares-Méndez María de los Ángeles , Jiménez-Mejías Manuel E. , Márquez-Rivas Javier
Published: May 2016

This report describes a reliable and simple technique for securing external ventricular drains (EVDs) to the scalp and avoiding pullout complications. The operative technique consists of fixing the drain between 2 hydrocolloid dressings and securing it with staples. A 10-year retrospective analysis of EVD pullout complications was performed in a series of 435 consecutive patients who were treated at a single institution. The EVD pullout complication rate was 0.4%. No complications related to the fixation technique were found. The median operative time required to fix the drain was 60 seconds. The technique presented here is a simple and reliable procedure to fix the EVD to the scalp, preventing pullout complications and thus reducing the morbidity of EVD reimplantation.
Cervical radiographic parameters in 1- and 2-level anterior cervical discectomy and fusion
Authors: Gillis Christopher C. , Kaszuba Megan C. , Traynelis Vincent C.
Published: May 2016

OBJECTIVE

Anterior cervical discectomy and fusion (ACDF) is one of the most commonly performed spine procedures. It can be used to correct cervical kyphotic deformity, which is the most common cervical deformity, and is often performed using lordotic interbody devices. Worsening of the cervical sagittal parameters is associated with decreased health-related quality of life. The study hypothesis is that through the use of machined lordotic allografts in ACDF, segmental and overall cervical lordosis can be maintained or increased, which will have a positive impact on overall cervical sagittal alignment.

METHODS

Seventy-four cases of 1-level ACDF (ACDF1) and 2-level ACDF (ACDF2) (40 ACDF1 and 34 ACDF2 procedures) were retrospectively reviewed. Upright neutral lateral radiographs were assessed preoperatively and at 6 weeks and 1 year postoperatively. The measured radiographic parameters included focal lordosis, disc height, C2–7 lordosis, C1–7 lordosis, T-1 slope, and C2–7 sagittal vertical axis. Correlation coefficients were calculated to determine the relationships between these radiographic measurements.

RESULTS

The mean values were as follows: preoperative focal lordosis was 0.574°, disc height was 4.48 mm, C2–7 lordosis was 9.66°, C1–7 lordosis was 42.5°, cervical sagittal vertebral axis (SVA) was 26.9 mm, and the T-1 slope was 33.2°. Cervical segmental lordosis significantly increased by 6.31° at 6 weeks and 6.45° at 1 year. C2–7 lordosis significantly improved by 1 year with a mean improvement of 3.46°. There was a significant positive correlation between the improvement in segmental lordosis and overall cervical lordosis. Overall cervical lordosis was significantly negatively correlated with cervical SVA. Improved segmental lordosis was not correlated with cervical SVA in ACDF1 patients but was significantly negatively correlated in ACDF2 patients. There was also a significant positive correlation between the T-1 slope and cervical SVA.

CONCLUSIONS

In the study population, the improvement of focal lordosis was significantly correlated with an improvement in overall lordosis (C1–7 and C2–7), and overall lordosis as measured by the C2–7 Cobb angle was significantly negatively correlated with cervical SVA. Using lordotic cervical allografts, we successfully created and maintained significant improvement in cervical segmental lordosis at the 6-week and 1-year time points with values of 6.31° and 6.45°, respectively. ACDF is able to achieve statistically significant improvement in C2–7 cervical lordosis by the 1-year followup, with a mean improvement of 3.46°. Increasing the number of levels operated on resulted in improved cervical sagittal parameters. This establishes a baseline for further examination into the ability of multilevel ACDF to achieve cervical deformity correction through the intervertebral correction of lordosis.
Innovative Methodology for Multi-View Point Cloud Registration in Robotic 3D Object Scanning and Reconstruction
Authors: Chen Liang-Chia , Hoang Dinh-Cuong , Lin Hsien-I , Nguyen Thanh-Hung
Published: May 2016

The paper is concerned with the problem of multi-view three-dimensional (3D) point cloud registration. A novel global registration method is proposed to accurately register two series of scans into an object model underlying 3D imaging digitization by using the proposed oriented bounding box (OBB) regional area-based descriptor. A robot 3D scanning strategy is nowadays employed to generate the complete set of point cloud of physical objects by using 3D robot multi-view scanning and data registration. The automated operation has to successively digitize view-dependent area-scanned point cloud from complex-shaped objects by simultaneous determination of the next best robot pose and multi-view point cloud registration. To achieve this, the OBB regional area-based descriptor is employed to determine an initial transformation matrix and is then refined employing the iterative closest point (ICP) algorithm. The key technical breakthrough can resolve the commonly encountered difficulty in accurately merging two neighboring area-scanned images when no coordinate reference exists. To verify the effectiveness of the strategy, the developed method has been verified through some experimental tests for its registration accuracy. Experimental results have preliminarily demonstrated the feasibility and applicability of the developed method.
Young Love: Romantic Concerns and Associated Mental Health Issues among Adolescent Help-Seekers
Authors: Price Megan , Hides Leanne , Cockshaw Wendell , Staneva Aleksandra , Stoyanov Stoyan
Published: May 2016

Over 50% of young people have dated by age 15. While romantic relationship concerns are a major reason for adolescent help-seeking from counselling services, we have a limited understanding of what types of relationship issues are most strongly related to mental health issues and suicide risk. This paper used records of 4019 counselling sessions with adolescents (10–18 years) seeking help from a national youth counselling service for a romantic relationship concern to: (i) explore what types and stage (pre, during, post) of romantic concerns adolescents seek help for; (ii) how they are associated with mental health problems, self-harm and suicide risk; and (iii) whether these associations differ by age and gender. In line with developmental-contextual theory, results suggest that concerns about the initiation of relationships are common in early adolescence, while concerns about maintaining and repairing relationships increase with age. Relationship breakups were the most common concern for both male and female adolescents and for all age groups (early, mid, late adolescence). Data relating to a range of mental health issues were available for approximately half of the sample. Post-relationship concerns (including breakups) were also more likely than pre- or during-relationship concerns to be associated with concurrent mental health issues (36.8%), self-harm (22.6%) and suicide (9.9%). Results draw on a staged developmental theory of adolescent romantic relationships to provide a comprehensive assessment of relationship stressors, highlighting post-relationship as a particularly vulnerable time for all stages of adolescence. These findings contribute to the development of targeted intervention and support programs.
Automated Micro-Object Detection for Mobile Diagnostics Using Lens-Free Imaging Technology
Authors: Roy Mohendra , Seo Dongmin , Oh Sangwoo , Chae Yeonghun , Nam Myung-Hyun , Seo Sungkyu
Published: May 2016

Lens-free imaging technology has been extensively used recently for microparticle and biological cell analysis because of its high throughput, low cost, and simple and compact arrangement. However, this technology still lacks a dedicated and automated detection system. In this paper, we describe a custom-developed automated micro-object detection method for a lens-free imaging system. In our previous work (Roy et al.), we developed a lens-free imaging system using low-cost components. This system was used to generate and capture the diffraction patterns of micro-objects and a global threshold was used to locate the diffraction patterns. In this work we used the same setup to develop an improved automated detection and analysis algorithm based on adaptive threshold and clustering of signals. For this purpose images from the lens-free system were then used to understand the features and characteristics of the diffraction patterns of several types of samples. On the basis of this information, we custom-developed an automated algorithm for the lens-free imaging system. Next, all the lens-free images were processed using this custom-developed automated algorithm. The performance of this approach was evaluated by comparing the counting results with standard optical microscope results. We evaluated the counting results for polystyrene microbeads, red blood cells, and HepG2, HeLa, and MCF7 cells. The comparison shows good agreement between the systems, with a correlation coefficient of 0.91 and linearity slope of 0.877. We also evaluated the automated size profiles of the microparticle samples. This Wi-Fi-enabled lens-free imaging system, along with the dedicated software, possesses great potential for telemedicine applications in resource-limited settings.
Magnetically-Driven Quantum Heat Engines: The Quasi-Static Limit of Their Efficiency
Authors: Muñoz Enrique , Peña Francisco , González Alejandro
Published: May 2016

The concept of a quantum heat engine (QHEN) has been discussed in the literature, not only due to its intrinsic scientific interest, but also as an alternative to efficiently recover, on a nanoscale device, thermal energy in the form of useful work. The quantum character of a QHEN relies, for instance, on the fact that any of its intermediate states is determined by a density matrix operator. In particular, this matrix can represent a mixed state. For a classical heat engine, a theoretical upper bound for its efficiency is obtained by analyzing its quasi-static operation along a cycle drawn by a sequence of quasi-equilibrium states. A similar analysis can be carried out for a quantum engine, where quasi-static processes are driven by the evolution of ensemble-averaged observables, via variation of the corresponding operators or of the density matrix itself on a tunable physical parameter. We recently proposed two new conceptual designs for a magnetically-driven quantum engine, where the tunable parameter is the intensity of an external magnetic field. Along this article, we shall present the general quantum thermodynamics formalism developed in order to analyze this type of QHEN, and moreover, we shall apply it to describe the theoretical efficiency of two different practical implementations of this concept: an array of semiconductor quantum dots and an ensemble of graphene flakes submitted to mechanical tension.
Quantum Errors and Disturbances: Response to Busch, Lahti and Werner
Authors: Appleby David
Published: May 2016

Busch, Lahti and Werner (BLW) have recently criticized the operator approach to the description of quantum errors and disturbances. Their criticisms are justified to the extent that the physical meaning of the operator definitions has not hitherto been adequately explained. We rectify that omission. We then examine BLW’s criticisms in the light of our analysis. We argue that, although the BLW approach favour (based on the Wasserstein two-deviation) has its uses, there are important physical situations where an operator approach is preferable. We also discuss the reason why the error-disturbance relation is still giving rise to controversies almost a century after Heisenberg first stated his microscope argument. We argue that the source of the difficulties is the problem of interpretation, which is not so wholly disconnected from experimental practicalities as is sometimes supposed.
Diagnostic Measurements for Power Transformers
Authors: Tenbohlen Stefan , Coenen Sebastian , Djamali Mohammad , Müller Andreas , Samimi Mohammad , Siegel Martin
Published: May 2016

With the increasing age of the primary equipment of the electrical grids there exists also an increasing need to know its internal condition. For this purpose, off- and online diagnostic methods and systems for power transformers have been developed in recent years. Online monitoring is used continuously during operation and offers possibilities to record the relevant stresses which can affect the lifetime. The evaluation of these data offers the possibility of detecting oncoming faults early. In comparison to this, offline methods require disconnecting the transformer from the electrical grid and are used during planned inspections or when the transformer is already failure suspicious. This contribution presents the status and current trends of different diagnostic techniques of power transformers. It provides significant tutorial elements, backed up by case studies, results and some analysis. The broadness and improvements of the presented diagnostic techniques show that the power transformer is not anymore a black box that does not allow a view into its internal condition. Reliable and accurate condition assessment is possible leading to more efficient maintenance strategies.
Don Draper Thinks Your Ad Is Cliché: Fairy Tale Iconography in TV Commercials
Authors: Wittwer Preston
Published: May 2016

When examining the history of fairy tale iconography in advertising, folklore scholar Donald Haase’s fairy tale encyclopedia compared the Pied Piper of Hamelin to a symbol of advertising who could “play his pipe ever so sweetly and the consumers following him without resisting his charming and manipulative music.” In contrast, a 2012 episode of Mad Men, advertising luminary Don Draper shoots down a shoe commercial pitch featuring Cinderella, calling the idea “cliché”. The temptation for advertisers to rely on fairy tale figures and iconography continues today and many ignore Don’s aversion for cliché because it still gets the job done. However, there are some ads featuring fairy tales which avoid cliché and are truly innovative for their time. I’ll examine how, and for whom, these fairy tale figures have been adapted decade by decade in order to examine popular culture’s commercialized and hypnotic relationship with fairy tales in the most direct format available: television commercials.
Lung Cancer Mortality and Topography: A Xuanwei Case Study
Authors: Ren Hongyan , Cao Wei , Chen Gongbo , Yang Junxing , Liu Liqun , Wan Xia , Yang Gonghuan
Published: May 2016

The epidemic of lung cancer in Xuanwei City, China, remains serious despite the reduction of the risk of indoor air pollution through citywide stove improvement. The main objective of this study was to characterize the influences of topography on the spatiotemporal variations of lung cancer mortality in Xuanwei during 1990–2013. Using the spatially empirical Bayes method, the smoothed mortality rate of lung cancer was obtained according to the mortality data and population data collected from the retrospective survey (1990–2005) and online registration data (2011–2013). Spatial variations of the village-level mortality rate and topographic factors, including the relief degree of land surface (RDLS) and dwelling conditions (VDC), were characterized through spatial autocorrelation and hotspot analysis. The relationship between topographic factors and the epidemic of lung cancer was explored using correlation analysis and geographically weighted regression (GWR). There is a pocket-like area (PLA) in Xuanwei, covering the clustered villages with lower RDLS and higher VDC. Although the villages with higher mortality rate (>80 per 105) geographically expanded from the center to the northeast of Xuanwei during 1990–2013, the village-level mortality rate was spatially clustered, which yielded a persistent hotspot area in the upward part of the PLA. In particular, the epidemic of lung cancer was closely correlated with both RDLS and VDC at the village scale, and its spatial heterogeneity could be greatly explained by the village-level VDC in the GWR model. Spatiotemporally featured lung cancer mortality in Xuanwei was potentially influenced by topographic conditions at the village scale.
Incidence of Myelodysplastic Syndrome in UK Petroleum Distribution and Oil Refinery Workers, 1995–2011
Authors: Sorahan Tom , Mohammed Nuredin
Published: May 2016

The incidence of myelodysplastic syndrome (MDS) experienced by cohorts of 16,467 petroleum distribution workers and 28,554 oil refinery workers has been investigated. Study subjects were all those male employees first employed at one of 476 UK petroleum distribution centres or eight UK oil refineries in the period 1946–1974; all subjects had a minimum of twelve months employment with some employment after 1st January, 1951. Observed numbers (Obs) of MDS cases were compared with expectations based on national incidence rates for the period 1995–2011. The overall standardised registration ratio (SRR) was 73 (Obs = 17) in petroleum distribution workers for the age-range 15–84 years, and 77 (Obs = 21) for the age-range 15–99 years. The overall SRR was 81 (Obs = 29) in oil refinery workers for the age-range 15–84 years, and 83 (Obs = 36) for the age-range 15–99 years. More detailed analyses were carried out in terms of year of registration, period from hire, decade of hire, and duration of employment. The overall SRR findings did not provide clear evidence for the presence of an occupational cancer hazard, and provide no support for the hypothesis that low-level benzene exposure has an important effect on the risks of MDS.
Delineating Urban Fringe Area by Land Cover Information Entropy—An Empirical Study of Guangzhou-Foshan Metropolitan Area, China
Authors: Huang Junyi , Zhou Qiming , Wu Zhifeng
Published: May 2016

Rapid urbanization has caused many environmental problems, such as the heat island effect, intensifying air pollution, pollution from runoff, loss of wildlife habitat, etc. Accurate evaluations of these problems demand an accurate delineation of the spatial extent of the urban fringe. Conceptual and analytical ambiguity of the urban fringe and a general lack of consensus among researchers have made its measurement very difficult. This study reports a compound and reliable method to delineate the urban fringe area using a case study. Based on the 'fringe effect' theory in landscape ecology, the existing land cover information entropy model for defining the urban fringe is renewed by incorporating scale theory, cartography and urban geography theory. Results show that the urban fringe area of Guangzhou and Foshan metropolitan area covers an area of 2031 km2, and it occupies over 31% of the total study area. Result evaluation by industry structure data shows satisfactory correspondence with different land cover types. This paper reports the method and outcome of an attempt to provide an objective, repeatable and generally applicable method for mapping its spatial extent from remote sensing imageries, and could be beneficial to relevant urban studies and urban fringe management projects.
SARS Coronavirus Papain-Like Protease Inhibits the TLR7 Signaling Pathway through Removing Lys63-Linked Polyubiquitination of TRAF3 and TRAF6
Authors: Li Shih-Wen , Wang Ching-Ying , Jou Yu-Jen , Huang Su-Hua , Hsiao Li-Hsin , Wan Lei , Lin Ying-Ju , Kung Szu-Hao , Lin Cheng-Wen
Published: May 2016

Severe acute respiratory syndrome coronavirus (SARS-CoV) papain-like protease (PLPro) reportedly inhibits the production of type I interferons (IFNs) and pro-inflammatory cytokines in Toll-like receptor 3 (TLR3) and retinoic acid-inducible gene 1 (RIG-I) pathways. The study investigated the inhibitory effect and its antagonistic mechanism of SARS-CoV PLPro on TLR7-mediated cytokine production. TLR7 agonist (imiquimod (IMQ)) concentration-dependently induced activation of ISRE-, NF-κB- and AP-1-luciferase reporters, as well as the production of IFN-α, IFN-β, TNF-α, IL-6 and IL-8 in human promonocyte cells. However, SARS-CoV PLPro significantly inhibited IMQ-induced cytokine production through suppressing the activation of transcription factors IRF-3, NF-κB and AP-1. Western blot analysis with anti-Lys48 and anti-Lys63 ubiquitin antibodies indicated the SARS-CoV PLPro removed Lys63-linked ubiquitin chains of TRAF3 and TRAF6, but not Lys48-linked ubiquitin chains in un-treated and treated cells. The decrease in the activated state of TRAF3 and TRAF6 correlated with the inactivation of TBK1 in response to IMQ by PLPro. The results revealed that the antagonism of SARS-CoV PLPro on TLR7-mediated innate immunity was associated with the negative regulation of TRAF3/6-TBK1-IRF3/NF-κB/AP1 signals.
Ionone Derivatives from the Mycelium of Phellinus linteus and the Inhibitory Effect on Activated Rat Hepatic Stellate Cells
Authors: Huang Shiow-Chyn , Kuo Ping-Chung , Hung Hsin-Yi , Pan Tai-Long , Chen Fu-An , Wu Tian-Shung
Published: May 2016

Three new γ-ionylideneacetic acid derivatives, phellinulins A–C (1–3), were characterized from the mycelium extract of Phellinus linteus. The chemical structures were established based on the spectroscopic analysis. In addition, phellinulin A (1) was subjected to the examination of effects on activated rat hepatic stellate cells and exhibited significant inhibition of hepatic fibrosis.
Gene Mutation Profiles in Primary Diffuse Large B Cell Lymphoma of Central Nervous System: Next Generation Sequencing Analyses
Authors: Todorovic Balint Milena , Jelicic Jelena , Mihaljevic Biljana , Kostic Jelena , Stanic Bojana , Balint Bela , Pejanovic Nadja , Lucic Bojana , Tosic Natasa , Marjanovic Irena , Stojiljkovic Maja , Karan-Djurasevic Teodora , Perisic Ognjen , Rakocevic Goran , Popovic Milos , Raicevic Sava , Bila Jelena , Antic Darko , Andjelic Bosko , Pavlovic Sonja
Published: May 2016

The existence of a potential primary central nervous system lymphoma-specific genomic signature that differs from the systemic form of diffuse large B cell lymphoma (DLBCL) has been suggested, but is still controversial. We investigated 19 patients with primary DLBCL of central nervous system (DLBCL CNS) using the TruSeq Amplicon Cancer Panel (TSACP) for 48 cancer-related genes. Next generation sequencing (NGS) analyses have revealed that over 80% of potentially protein-changing mutations were located in eight genes (CTNNB1, PIK3CA, PTEN, ATM, KRAS, PTPN11, TP53 and JAK3), pointing to the potential role of these genes in lymphomagenesis. TP53 was the only gene harboring mutations in all 19 patients. In addition, the presence of mutated TP53 and ATM genes correlated with a higher total number of mutations in other analyzed genes. Furthermore, the presence of mutated ATM correlated with poorer event-free survival (EFS) (p = 0.036). The presence of the mutated SMO gene correlated with earlier disease relapse (p = 0.023), inferior event-free survival (p = 0.011) and overall survival (OS) (p = 0.017), while mutations in the PTEN gene were associated with inferior OS (p = 0.048). Our findings suggest that the TP53 and ATM genes could be involved in the molecular pathophysiology of primary DLBCL CNS, whereas mutations in the PTEN and SMO genes could affect survival regardless of the initial treatment approach.
12-Lipoxygenase Inhibition on Microalbuminuria in Type-1 and Type-2 Diabetes Is Associated with Changes of Glomerular Angiotensin II Type 1 Receptor Related to Insulin Resistance
Authors: Xu Hong-Zhao , Cheng Yan-Li , Wang Wan-Ning , Wu Hao , Zhang Yuan-Yuan , Zang Chong-Sen , Xu Zhong-Gao
Published: May 2016

(1) Background: 12-lipoxygenase (12-LO) is involved in the development of diabetic nephropathy (DN). In the present study, we investigated whether 12-LO inhibition may ameliorate type-2 DN (T2DN) by interfering with insulin resistance (IR); (2) Methods: Rat glomerular mesangial cells, glomeruli and skeletal muscles were isolated and used in this study. Kidney histological changes were confirmed by periodic-acid Schiff staining; mRNA expression was detected by competitive reverse transcription polymerase chain reaction; and the protein level was determined by Western blot and the enzyme-linked immunosorbent assay, respectively; (3) Results: The inhibition of 12-LO attenuated microalbuminuria (MAU) increases in type-2 diabetic rats, but not in type-1 diabetic rats. Infusion of 12(S)-hydroxyeicosatetraenoic acid (12(S)-HETE) significantly increased the expression of angiotensin II (Ang II) and Ang II type 1 receptor (AT1R), but decreased the expression of AT1R-associated protein (ATRAP) in rat glomeruli, compared to the control. An in vitro study revealed that both 12(S)-HETE and insulin upregulated AT1R expression in rat mesangial cells. In the presence of p38 mitogen-activated protein kinase (MAPK) inhibitor, SB202190, the 12(S)-HETE-induced ATRAP reduction was significantly abolished. Interestingly, 12-LO inhibition did not influence AT1R expression in type-1 diabetic rats, but significantly abolished the increased AT1R and Ang II expression in glomeruli of type-2 diabetic rats. Furthermore, the inhibition of 12-LO significantly corrected impaired insulin sensitivity and fast serum insulin level, as well as the p-AMP-activated protein kinase (AMPK) reduction in skeletal muscle of type-2 diabetic rats; (4) Conclusion: The inhibition of 12-LO potentially ameliorated MAU by preventing IR through the downregulation of glomerular AT1R expression in T2DN.
Connecting the Dots: From DNA Damage and Repair to Aging
Authors: Pan Mei-Ren , Li Kaiyi , Lin Shiaw-Yih , Hung Wen-Chun
Published: May 2016

Mammalian cells evolve a delicate system, the DNA damage response (DDR) pathway, to monitor genomic integrity and to prevent the damage from both endogenous end exogenous insults. Emerging evidence suggests that aberrant DDR and deficient DNA repair are strongly associated with cancer and aging. Our understanding of the core program of DDR has made tremendous progress in the past two decades. However, the long list of the molecules involved in the DDR and DNA repair continues to grow and the roles of the new “dots” are under intensive investigation. Here, we review the connection between DDR and DNA repair and aging and discuss the potential mechanisms by which deficient DNA repair triggers systemic effects to promote physiological or pathological aging.
Varicella Skin Complications in Childhood: A Case Series and a Systematic Review of the Literature
Authors: Bozzola Elena , Bozzola Mauro , Krzysztofiak Andrzej , Tozzi Alberto , El Hachem May , Villani Alberto
Published: May 2016

Even if varicella is generally considered a harmless disease in childhood, severe complications may occur. We examined varicella skin complications (VSCs) in hospitalized immunologically healthy children, over a nine-year period. We also systematically analyzed previous reports to calculate the rate of VSCs in the literature. VSCs occurred in 16.4% of children hospitalized for varicella. This figure is in accordance with the literature, as the range of VSCs was 2.6%–41.2%. Skin complications may represent determinants of hospitalization and of other indirect costs in young children.
Biopolymer Green Lubricant for Sustainable Manufacturing
Authors: Shi Shih-Chen , Lu Fu-I
Published: May 2016

We report on the preparation of a biopolymer thin film by hydroxypropyl methylcellulose (HPMC), which can be used as a dry green lubricant in sustainable manufacturing. The thin films were characterized through scanning electron microscopy, energy-dispersive spectroscopy, and Raman spectroscopy; the films showed desirable levels of thickness, controllability, and uniformity. Tribology tests also showed desirable tribological and antiwear behaviors, caused by the formation of transfer layers. Zebrafish embryo toxicity studies showed that HPMC has excellent solubility and biocompatibility, which may show outstanding potential for applications as a green lubricant. The results of the present study show that these techniques for biopolymer HPMC provide an ecologically responsible and convenient method for preparing functional thin films, which is particularly applicable to sustainable manufacturing.
Specific Ion Effects in Cholesterol Monolayers
Authors: Del Castillo-Santaella Teresa , Maldonado-Valderrama Julia , Faraudo Jordi , Martín-Molina Alberto
Published: May 2016

The interaction of ions with interfaces and, in particular, the high specificity of these interactions to the particular ions considered, are central questions in the field of surface forces. Here we study the effect of different salts (NaI, NaCl, CaCl2 and MgCl2) on monolayers made of cholesterol molecules, both experimentally (surface area vs. lateral pressure isotherms measured by a Langmuir Film Balance) and theoretically (molecular dynamics (MD) all-atomic simulations). We found that surface isotherms depend, both quantitatively and qualitatively, on the nature of the ions by altering the shape and features of the isotherm. In line with the experiments, MD simulations show clear evidences of specific ionic effects and also provide molecular level details on ion specific interactions with cholesterol. More importantly, MD simulations show that the interaction of a particular ion with the surface depends strongly on its counterion, a feature ignored so far in most theories of specific ionic effects in surface forces.
Sustainability, Eco-Point and Engineering Performance of Different Workability OPC Fly-Ash Mortar Mixes
Authors: Razi Putri , Abdul Razak Hashim , Khalid Nur
Published: May 2016

This study investigates the engineering performance and CO2 footprint of mortar mixers by replacing Portland cement with 10%, 20%, 40% and 60% fly ash, a common industrial waste material. Samples of self-compacting mortar (SCM) were prepared with four different water/binder ratios and varying dosages of superplasticizer to give three ranges of workability, i.e., normal, high and self-compacting mortar mix. The engineering performance was assessed in term of compressive strength after designated curing periods for all mixes. CO2 footprint was the environmental impact indicator of each production stage. The optimum mix obtained was at 10% replacement rate for all mixes. Total production emission reduced by 56% when the fly ash replacement rate increased from 0% to 60% (maximum). This is translated to a reduction of 80% in eco-points (assuming that the energy consumption rate of production with 0% fly ash is at 100%). Such re-utilization is encouraged since it is able to reduce possible soil toxicity due to sulfur leaching by 5% to 27% and landfill area by 15% to 91% on average.
High Throughput Studies of Cell Migration in 3D Microtissues Fabricated by a Droplet Microfluidic Chip
Authors: Che Xiangchen , Nuhn Jacob , Schneider Ian , Que Long
Published: May 2016

Arrayed three-dimensional (3D) micro-sized tissues with encapsulated cells (microtissues) have been fabricated by a droplet microfluidic chip. The extracellular matrix (ECM) is a polymerized collagen network. One or multiple breast cancer cells were embedded within the microtissues, which were stored in arrayed microchambers on the same chip without ECM droplet shrinkage over 48 h. The migration trajectory of the cells was recorded by optical microscopy. The migration speed was calculated in the range of 3–6 µm/h. Interestingly, cells in devices filled with a continuous collagen network migrated faster than those where only droplets were arrayed in the chambers. This is likely due to differences in the length scales of the ECM network, as cells embedded in thin collagen slabs also migrate slower than those in thick collagen slabs. In addition to migration, this technical platform can be potentially used to study cancer cell-stromal cell interactions and ECM remodeling in 3D tumor-mimicking environments.
In Silico Investigation of Traditional Chinese Medicine for Potential Lead Compounds as SPG7 Inhibitors against Coronary Artery Disease
Authors: Chen Kuen-Bao , Chen Kuan-Chung , Chang Ya-Lin , Chang Kun-Lung , Chang Pei-Chun , Chang Tung-Ti , Chen Yu-Chian
Published: May 2016

Coronary artery disease (CAD) is the most common cause of heart attack and the leading cause of mortality in the world. It is associated with mitochondrial dysfunction and increased level of reactive oxygen species production. According to the Ottawa Heart Genomics Study genome-wide association study, a recent research identified that Q688 spastic paraplegia 7 (SPG7) variant is associated with CAD as it bypasses the regulation of tyrosine phosphorylation of AFG3L2 and enhances the processing and maturation of SPG7 protein. This study aims to identify potential compounds isolated from Traditional Chinese Medicines (TCMs) as potential lead compounds for paraplegin (SPG7) inhibitors. For the crystallographic structure of paraplegin, the disordered disposition of key amino acids in the binding site was predicted using the PONDR-Fit protocol before virtual screening. The TCM compounds saussureamine C and 3-(2-carboxyphenyl)-4(3H)-quinazolinone, have potential binding affinities with stable H-bonds and hydrophobic contacts with key residues of paraplegin. A molecular dynamics simulation was performed to validate the stability of the interactions between each candidate and paraplegin under dynamic conditions. Hence, we propose these compounds as potential candidates as lead drug from the compounds isolated from TCM for further study in drug development process with paraplegin protein for coronary artery disease.
Influence of Gender and SNPs in GPX1 Gene on Biomarkers of Selenium Status in Healthy Brazilians
Authors: Donadio Janaina , Guerra-Shinohara Elvira , Rogero Marcelo , Cozzolino Silvia
Published: May 2016

Selenium (Se) status varies worldwide as a result of natural variation of Se content in soils, dietary pattern, and the presence of SNPs. Further, Se status in Brazilians and its relationship between genetic variation and Se biomarkers is unknown. This work investigated the association between SNPs in glutathione peroxidase genes and biomarkers of Se status in healthy Brazilians. The study was conducted in 116 healthy adults in São Paulo, Brazil. Plasma and erythrocyte Se were measured by HGFAAS. Erythrocyte GPx (eGPx) activity was measured spectrometrically in a biochemical analyzer. Genotypes were determined by real-time PCR using Taqman® Assays. eGPx activity was higher in females compared with males. Lower erythrocyte Se concentrations were found in heterozygous GC carriers for GPX1 rs8179169. eGPx activity was higher in females with the common genotypes, except for rs8179169. GC carriers for rs8179169 had lower erythrocyte Se in both genders, and only male carriers of the variant alleles of both rs1050450 and rs1800668 had higher eGPx activity. In conclusion, the genotype for SNPs in GPX1 and gender affected biomarkers of Se status in this pilot study with healthy Brazilians.
Effect of a Semi-Purified Oligosaccharide-Enriched Fraction from Caprine Milk on Barrier Integrity and Mucin Production of Co-Culture Models of the Small and Large Intestinal Epithelium
Authors: Barnett Alicia , Roy Nicole , McNabb Warren , Cookson Adrian
Published: May 2016

Caprine milk contains the highest amount of oligosaccharides among domestic animals, which are structurally similar to human milk oligosaccharides (HMOs). This suggests caprine milk oligosaccharides may offer similar protective and developmental effects to that of HMOs. However, to date, studies using oligosaccharides from caprine milk have been limited. Thus, this study aimed to examine the impact of a caprine milk oligosaccharide-enriched fraction (CMOF) on barrier function of epithelial cell co-cultures of absorptive enterocytes (Caco-2 cells) and mucus-secreting goblet cells (HT29-MTX cells), that more closely simulate the cell proportions found in the small (90:10) and large intestine (75:25). Treatment of epithelial co-cultures with 0.4, 1.0, 2.0 and 4.0 mg/mL of CMOF was shown to have no effect on metabolic activity but did enhance cell epithelial barrier integrity as measured by trans-epithelial electrical resistance (TEER), in a dose-dependent manner. The CMOF at the maximum concentration tested (4.0 mg/mL) enhanced TEER, mucin gene expression and mucin protein abundance of epithelial co-cultures, all of which are essential components of intestinal barrier function.