bluuebunny/crossref_metadata_2025 huggingface dataset:
“Head-to-Toe” Lipid Properties Govern the Binding and Cargo Transfer of High-Density Lipoprotein
Authors: Weber Florian , Axmann Markus , Sezgin Erdinc , Amaro Mariana , Sych Taras , Hochreiner Armin , Hof Martin , Schütz Gerhard J. , Stangl Herbert , Plochberger Birgit
Published: December 2024

The viscoelastic properties of biological membranes are crucial in controlling cellular functions and are determined primarily by the lipids’ composition and structure. This work studies these properties by varying the structure of the constituting lipids in order to influence their interaction with high-density lipoprotein (HDL) particles. Various fluorescence-based techniques were applied to study lipid domains, membrane order, and the overall lateral as well as the molecule–internal glycerol region mobility in HDL–membrane interactions (i.e., binding and/or cargo transfer). The analysis of interactions with HDL particles and various lipid phases revealed that both fully fluid and some gel-phase lipids preferentially interact with HDL particles, although differences were observed in protein binding and cargo exchange. Both interactions were reduced with ordered lipid mixtures containing cholesterol. To investigate the mechanism, membranes were prepared from single-lipid components, enabling step-by-step modification of the lipid building blocks. On a biophysical level, the different mixtures displayed varying stiffness, fluidity, and hydrogen bond network changes. Increased glycerol mobility and a strengthened hydrogen bond network enhanced anchoring interactions, while fluid membranes with a reduced water network facilitated cargo transfer. In summary, the data indicate that different lipid classes are involved depending on the type of interaction, whether anchoring or cargo transfer.
Advanced Low–Cost Natural Materials for High–Performance Oil–Water Filtration Membranes: Achievements, Challenges, and Future Directions
Authors: Ramanamane Nthabiseng , Pita Mothibeli , Sob Baonhe
Published: December 2024

The development of affordable ceramic membranes is essential for reducing expenses and optimizing the treatment of oily wastewater. There is an urgent demand for membranes that are not only affordable and easy to operate but also stable and capable of managing high fluxes to address the increasing volumes of oily wastewater. The significant production demands associated with many commercially available ceramic membranes, primarily due to the use of specialised raw materials and intricate processing methods, limiting their suitability for many wastewater treatment applications. Consequently, there is a rising interest in creating innovative ceramic membranes using affordable materials and simpler production techniques. This study reviewed the oil–water ceramic membranes utilizing affordable natural ceramic materials aimed at improving membrane performance. It focused on reviewing the environmentally friendly and economically viable membranes derived from natural ceramic resources as an alternative to conventional synthetic membranes. These natural ceramic materials possess crucial properties like hydrophilicity and oleophobicity, which are vital for effective oil–water separation. The ceramic membranes were reviewed for their filtration performance and advantages. It was reported that these natural ceramic material-based membranes demonstrate superior separation efficiency, and strong mechanical stability, making them promising candidates for sustainable water treatment.
Effect of Hot-Dipped Tin Coating Treatment on Metallurgical Bonds Between AZ91D and Cu by Composite Casting
Authors: Wan Haochuan , Dai Jiahong , Zhang Jianyue , Jiang Bin
Published: December 2024

Mg-Cu bimetallic materials have been widely studied because of their low density, good electrical conductivity, and excellent hydrogen storage properties. However, the interface bonding strength of Mg/Cu is low. In this study, we examined the effect of hot-dip tin coating (HDTC) with copper (Cu) on the interfacial metallurgical bonds between AZ91D Magnesium (Mg) alloy and Cu composite casting. A transition layer composed of Mg2Cu and MgCu2 intermetallic compounds (IMCs) formed at the interface of the AZ91D/HDTC-Cu composite casting. However, the transition layer was about 1 μm at the AZ91D/Cu interface, mainly comprising Mg(Al, Cu)2 IMC. Both the AZ91D/Cu and AZ91D/HDTC-Cu interfaces exhibited many labyrinthine Mg(Al, Cu)2 IMCs and layer-like Mg2(Al, Cu) IMCs. Moreover, the interfacial shear strength of the AZ91D/Cu was changed from 12.6 MPa to 52.4 MPa due to the solid solution of Sn atom and the precipitation of Mg2Sn IMC at the interface after HDTC treatment. Meanwhile, the shear fracture surfaces are characterized by brittle fractures.
Protective Effects of a Brassica nigra Sprout Hydroalcoholic Extract on Lipid Homeostasis, Hepatotoxicity, and Nephrotoxicity in Cyclophosphamide-Induced Toxicity in Rats
Authors: Barakat Hassan , Aljutaily Thamer , Alkhurayji Raghad I. , Aljumayi Huda , Alhejji Khalid S. , Almutairi Sami O.
Published: December 2024

Background: Brassica nigra possesses a significant concentration of bioactive compounds and has been demonstrated to have a variety of pharmacological properties, although its sprout has not been extensively studied. Thus, the protective effects of Brassica nigra sprout hydroalcoholic extract (BNSE) on lipid homeostasis, hepatotoxicity, and nephrotoxicity in cyclophosphamide (CYP)-induced toxicity in rats were examined in this study. Methods: Four experimental rat groups (n = 8 for each group) were examined as follows: NR, normal rats that received normal saline by oral gavage daily; CYP, injected with a single dose of CYP at 250 mg kg−1 intraperitoneally (i.p.) and did not receive any treatment, receiving only normal saline by oral gavage daily; CYP + BNSE250, injected with a single dose of CYP at 250 mg kg−1 i.p. and treated with BNSE at 250 mg kg−1 by oral gavage daily for three weeks; and CYP + BNSE500, injected with a single dose of CYP at 250 mg kg−1 i.p. and treated with BNSE at 500 mg kg−1 by oral gavage daily for three weeks. Results: The results indicated a significant increase (p < 0.05) in triglyceride (TG), cholesterol (CHO), low-density lipoprotein cholesterol (LDL-c), and very low-density lipoprotein cholesterol (VLDL-c) levels in CYP-induced toxicity rats. The administration of BNSE at 250 and 500 mg kg−1 significantly (p < 0.05) attenuated TG, CHO, LDL-c, and VLDL-c at values comparable with the NR group. The most efficient treatment for improving the lipid profile and atherogenicity complication was BNSE at 500 mg kg−1, performing even better than 250 mg kg−1. Administrating BNSE at 250 or 500 mg kg−1 improved the liver’s function in a dose-dependent manner. Comparing the lower dose of 250 mg kg−1 of BNSE with 500 mg kg−1 showed that administrating 250 mg kg−1 attenuated alanine transaminase (ALT) by 28.92%, against 33.36% when 500 mg kg−1 was given. A similar trend was observed in aspartate aminotransferase (AST), where 19.44% was recorded for BNSE at 250 mg kg−1 and 34.93% for BNSE at 500 mg kg−1. Higher efficiency was noticed for BNSE at 250 and 500 mg kg−1 regarding alkaline phosphatase (ALP). An improvement of 38.73% for BNSE at 500 mg kg−1 was shown. The best treatment was BNSE at 500 mg kg−1, as it markedly improved liver function, such as total bilirubin (T.B.), in a dose-dependent manner. The administration of BNSE attenuated the total protein (T.P.), albumin, and globulin levels to be close to or higher than the typical values in NR rats. Conclusions: BNSE might be used for its promising hypolipidemic, hepatoprotective, and nephroprotective potential and to prevent diseases related to oxidative stress. Further research on its application in humans is highly recommended.
A Ketogenic Diet Followed by Gradual Carbohydrate Reintroduction Restores Menstrual Cycles in Women with Polycystic Ovary Syndrome with Oligomenorrhea Independent of Body Weight Loss: Results from a Single-Center, One-Arm, Pilot Study
Authors: Rossetti Rebecca , Strinati Vittoria , Caputi Alessandra , Risi Renata , Spizzichini Maria Letizia , Mondo Alessandro , Spiniello Lorenzo , Lubrano Carla , Giancotti Antonella , Tuccinardi Dario , Gnessi Lucio , Watanabe Mikiko
Published: December 2024

Background/Objectives: Polycystic ovary syndrome (PCOS) is a common endocrine disorder in women of fertile age. Some studies suggest that a ketogenic diet (KD) may have a role in treating PCOS. We aimed to demonstrate the long-term effectiveness of a KD in PCOS. Methods: Eighteen patients with PCOS phenotype A were enrolled: 28% were of normal weight, 28% were overweight, and 44% had obesity. All participants followed a KD without meal replacements for 45 days. After this period, patients underwent gradual carbohydrate reintroduction over 45 days, and thereafter healthy eating indications were given. Twelve patients completed the study. The patients were assessed at baseline and after 6 months. Anthropometric data, body composition, pelvic ultrasound, blood chemistry, hirsutism, and menstrual cycles frequency were recorded; Results: Besides improvement in anthropometric parameters, menstrual cycles (p 0.012), ovarian volume (p 0.029), FSH (p 0.05), LH (p 0.037), and progesterone (p 0.017) improved independently of weight or fat loss. However, testosterone and hirsutism improvements were influenced by weight and fat mass reduction. Conclusions: Our study showed that a KD followed by gradual carbohydrate reintroduction in PCOS has beneficial effects medium term, mostly independent of body weight loss, even in normal-weight women, suggesting that nutritional ketosis exerts beneficial effects per se.
Exploring the In Vitro Effects of Zingerone on Differentiation and Signalling Pathways in Bone Cell Lines
Authors: De Vos Brunhildé , Kasonga Abe E. , Joubert Anna M. , Nyakudya Trevor T.
Published: December 2024

Objective: Ensuring adequate bone health is crucial for preventing conditions such as osteoporosis and fractures. Zingerone, a phytonutrient isolated from cooked ginger, has gained attention for its potential benefits in bone health. This study evaluated the osteoprotective potential of zingerone and its effects on differentiation and signalling pathways in vitro using SAOS-2 osteosarcoma and RAW264.7 macrophage cell lines, aiming to elucidate its mechanism of action in bone remodelling. Methods: SAOS-2 osteosarcoma and RAW264.7 macrophage cells were treated with zingerone at concentrations of 200 µM. Osteoblast differentiation was assessed by alkaline phosphatase (ALP) activity, bone mineralisation via Alizarin Red S stain, and gene expression markers (ALP, runt-related transcription factor 2 (Runx2), and osteocalcin) via quantitative polymerase chain reaction (q-PCR). Osteoclast differentiation was evaluated by tartrate-resistant acid phosphatase (TRAP) staining, TRAP activity, and mitogen-activated protein kinase (MAPK) pathways. Results: Treatment with zingerone was non-toxic at 200 µM. Zingerone (200 µM) significantly stimulated the gene expression of ALP and Runx2 in SAOS-2 cells (p < 0.05) without statistically significantly enhancing SAOS-2 mineralisation via calcium deposits. Moreover, zingerone significantly inhibited osteoclast differentiation in RAW264.7 cells as evidenced by reduced TRAP staining and activity (p < 0.05). Conclusions: Zingerone shows promise in reducing osteoclast activity and supporting early osteoblast differentiation, suggesting its potential as a dietary supplement for bone health. Further in vivo and clinical studies are needed to confirm its role in managing osteoporosis.
Design of Two Compact Wideband Monopoles Through Loading with Linear Approximated Lumped Components
Authors: Ma Jiansen , Cao Weiping , Yu Xinhua
Published: December 2024

In this paper, two ultra-wideband monopoles in a colinear structure are presented for application in remote terrestrial communication systems. The antennas consist of a loaded monopole with a hat and an elevated loaded monopole located in the upper position. All lumped loads are modeled as linear frequency-dependent components to approximate the practical component property for achieving ultra-wideband characteristics, since the constant value property of a component is only present in a relatively narrow band. The antennas are simulated by the method of moments (MoM) with asymptotic waveform evaluation (AWE) to speed up frequency sweep across a wide bandwidth. For proper simulation with the AWE process, the parallel RLC load with linear frequency-dependent components is modeled in a corresponding impedance function. With the optimized load parameters, one antenna covers 30–750 MHz with a VSWR < 3.5 and the other one covers 800 MHz–3000 MHz with a VSWR < 2.5, which are promising results for terrestrial omnidirectional applications.
Helicobacter pylori Inhibition, Gastritis Attenuation, and Gut Microbiota Protection in C57BL/6 Mice by Ligilactobacillus salivarius NCUH062003
Authors: Li Junyi , Xu Xiaoyan , Yang Shiyu , Liu Kui , Wu Min , Xie Mingyong , Xiong Tao
Published: December 2024

Helicobacter pylori (H. pylori), one of the most prevalent pathogenic bacteria worldwide, is the leading cause of gastritis, gastric intestinal metaplasia, and gastric cancer. Antibiotics, the conventional treatment for eliminating H. pylori, often lead to severe bacterial resistance, gut dysbiosis, and hepatic insufficiency and fail to address the inflammatory response or gastric mucosal damage caused by H. pylori infection. In this study, based on 10-week animal experiments, two models of L. salivarius NCUH062003 for the prophylaxis and therapy of H. pylori infection in C57BL/6 mice were established; a comprehensive comparative analysis was performed to investigate the anti-H. pylori effect of probiotics, the reduction in inflammation, and repair of gastric mucosal damage. ELISA, immunohistochemistry, and pathology analyses showed that NCUH062003 decreased the expression of pro-inflammatory cytokine interleukins (IL-1β, IL-6) and myeloperoxidase (MPO) and reduced neutrophil infiltration in the gastric mucosa lamina propria. Immunofluorescence and biochemical analysis showed that NCUH062003 resisted gastric epithelial cell apoptosis, increased the level of superoxide dismutase (SOD) in gastric mucosa, and promoted the expression of tight junction protein ZO1 and Occludin. In addition, through high-throughput sequencing, in the probiotic therapy and prophylactic mode, the diversity and composition of the gut microbiota of HP-infected mice were clarified, the potential functions of the gut microbiota were analyzed, the levels of short-chain fatty acids (SCFAs) were measured, and the effects of L. salivarius NCUH062003 on the gut microbiota and its metabolites in HP-infected mice treated with amoxicillin/metronidazole were revealed. This study provides functional strain resources for the development and application of microbial agents seeking to antagonize H. pylori beyond antibiotics.
Combined Effects of the Pijolavirus UFJF_PfSW6 Phage and Sodium Hypochlorite for Reducing Pseudomonas fluorescens Biofilm
Authors: Mendes Matheus B. , Vidigal Pedro M. P. , Soto Lopez Maryoris E. , Hungaro Humberto M.
Published: December 2024

Pseudomonas are significant spoilage bacteria in raw milk and dairy products, primarily due to their ability to form biofilms and resist disinfection. This study explored the effects of the UFJF_PfSW6 phage combined with sodium hypochlorite in reducing Pseudomonas fluorescens biofilms on stainless steel at various temperatures and ages. Biofilms were formed using P. fluorescens UFV 041 in UHT milk, incubated at 4 °C and 30 °C for 2 and 7 days. Two lytic phages were compared, with UFJF_PfSW6 showing superior activity, reducing cell counts by 0.8 to 2.0 logs CFU/cm2 depending on conditions. Increasing the contact time of the UFJF_PfSW6 phage from 4 to 8 h did not significantly affect the reduction in mature biofilms. The individual treatments of the phage and sodium hypochlorite (100 mg/L) reduced bacterial counts by 0.9 and 0.6 log CFU/cm2 at 30 °C, and 1.3 and 1.2 log CFU/cm2 at 4 °C, respectively. However, their sequential application achieved greater reductions, reaching 1.3 and 1.8 log CFU/cm2 for biofilms formed at 30 °C and 4 °C, respectively. These findings suggest a promising strategy for controlling P. fluorescens in the food industry. Our findings suggest that the UFJF_PfSW6 phage combined with chlorine improves the removal of P. fluorescens biofilms.
The Role of Inflammation in the Pathogenesis of Viral Respiratory Infections
Authors: Kombe Kombe Arnaud John , Fotoohabadi Leila , Gerasimova Yulia , Nanduri Ravikanth , Lama Tamang Pratik , Kandala Monisha , Kelesidis Theodoros
Published: December 2024

Viral respiratory infections (VRIs) are a leading cause of morbidity and mortality worldwide, making them a significant public health concern. During infection, respiratory viruses, including Influenza virus, SARS-CoV-2, and respiratory syncytial virus (RSV), trigger an antiviral immune response, specifically boosting the inflammatory response that plays a critical role in their pathogenesis. The inflammatory response induced by respiratory viruses can be a double-edged sword since it can be initially induced to be antiviral and protective/reparative from virus-induced injuries. Still, it can also be detrimental to host cells and tissues. However, the mechanisms that differentiate the complex crosstalk between favorable host inflammatory responses and harmful inflammatory responses are poorly understood. This review explores the complex interplay between viral pathogens and the host immune response, mainly focusing on the role of inflammation in the pathogenesis of VRIs. We discuss how inflammation can both contain and exacerbate the progression of viral infections, highlighting potential therapeutic targets and emerging drugs for modulating the aberrant inflammatory responses during VRIs.
Effect of Warming on Soil Fungal Community Along Altitude Gradients in a Subalpine Meadow
Authors: Yin Jing , Yuan Dandan , Lu Jing , Li He , Luo Shuzheng , Zhang Jianhua , Xiang Xingjia
Published: December 2024

The subalpine grassland ecosystem is sensitive to climatic changes. Previous studies investigated the effects of warming on grassland ecosystems at a single altitude, with little information about the response of subalpine meadows to warming along altitude gradients. This study aimed to evaluate the effects of warming on aboveground grass, belowground soil properties, and fungal community along altitude gradients in the subalpine meadow of Mount Wutai using the high-throughput sequencing method. Warming reduced the restriction of low temperatures on the growth of subalpine grass, resulting in increasing grass biomass, community height, and coverage. More grass biomass led to higher soil organic carbon resources, which primarily affected fungal community composition following warming. Warming might induce more stochastic processes of fungal community assembly, increasing fungal diversity at low altitudes. In contrast, warming triggered more deterministic processes to decrease fungal diversity at medium and high altitudes. Warming might improve the efficiency of soil nutrient cycling and organic matter turnover by increasing the relative abundance of soil saprotrophs and improving fungal network connectivity. The relative abundance of certain grass pathogens significantly increased following warming, thereby posing potential risks to the sustainability and stability of subalpine meadow ecosystems. Overall, this study comprehensively evaluated the response of the subalpine meadow ecosystems to warming along altitude gradients, clarifying that warming changes soil fungal community composition at different altitudes. The long-term monitoring of pathogen-related shifts should be conducted in subalpine meadow ecosystem following warming. This study provided significant scientific insights into the impact of future climatic changes on subalpine ecosystems.
Characterization of Unusual Serogroups of Neisseria meningitidis
Authors: Taha Samy , Fantoni Giulia , Hong Eva , Terrade Aude , Doucoure Oumar , Deghmane Ala-Eddine , Taha Muhamed-Kheir
Published: December 2024

Most cases of invasive meningococcal disease (IMD) in Europe are caused by isolates of the Neisseria meningitidis serogroups B, C, W, and Y. We aimed to explore cases caused by other unusual serogroups. We retrospectively screened IMD cases in the databases of the National Reference Center for Meningococci and Haemophilus influnezae in France between 2014 and 2023. Age, sex, serogroups, and genetic lineage distributions were analyzed. We also measured complement deposition on the bacterial surface and tested coverage by vaccines against serogroup B. Cases due to isolates of serogroups other than B, C, W, and Y represented 1.6% of all 3610 IMD cases during the study period with 59 cases and a median age of 21.5 years of age. The corresponding isolates were non-groupable (26 cases), serogroup X (21 cases), serogroup E (11 cases), and one isolate belonged to serogroup Z. Only a low proportion (7.4%) belonged to the hyperinvasive genetic lineages. Isolates of serogroup E bound a significantly higher amount of complement on their surface and were mainly detected in patients with terminal complement pathway deficiencies. Isolates of these unusual serogroups were shown to be covered by vaccines licensed against meningococci B. Surveillance of these isolates needs to be enhanced.
Pharmacodynamic Evaluation of Phage Therapy in Ameliorating ETEC-Induced Diarrhea in Mice Models
Authors: Xiong Yangjing , Xia Lu , Zhang Yumin , Zhao Guoqing , Zhang Shidan , Ma Jingjiao , Cheng Yuqiang , Wang Hengan , Sun Jianhe , Yan Yaxian , Wang Zhaofei
Published: December 2024

Enterotoxigenic Escherichia coli (ETEC) is a major pathogen causing diarrhea in humans and animals, with increasing antimicrobial resistance posing a growing challenge in recent years. Lytic bacteriophages (phages) offer a targeted and environmentally sustainable approach to combating bacterial infections, particularly in eliminating drug-resistant strains. In this study, ETEC strains were utilized as indicators, and a stable, high-efficiency phage, designated vB_EcoM_JE01 (JE01), was isolated from pig farm manure. The genome of JE01 was a dsDNA molecule, measuring 168.9 kb, and a transmission electron microscope revealed its characteristic T4-like Myoviridae morphology. JE01 effectively lysed multi-drug-resistant ETEC isolates. Stability assays demonstrated that JE01 retained its activity across a temperature range of 20 °C to 50 °C and a pH range of 3–11, showing resilience to ultraviolet radiation and chloroform exposure. Furthermore, JE01 effectively suppressed ETEC adhesion to porcine intestinal epithelial cells (IPEC-J2), mitigating the inflammatory response triggered by ETEC. To investigate the in vivo antibacterial efficacy of phage JE01 preparations, a diarrhea model was established using germ-free mice infected with a drug-resistant ETEC strain. The findings indicated that 12 h post-ETEC inoculation, intragastric administration of phage JE01 significantly reduced mortality, alleviated gastrointestinal lesions, decreased ETEC colonization in the jejunum, and suppressed the expression of the cytokines IL-6 and IL-8. These results demonstrate a therapeutic benefit of JE01 in treating ETEC-induced diarrhea in mice. Additionally, a fluorescent phage incorporating red fluorescent protein (RFP) was engineered, and the pharmacokinetics of phage therapy were preliminarily assessed through intestinal fluorescence imaging in mice. The results showed that the phage localized to ETEC in the jejunum rapidly, within 45 min. Moreover, the pharmacokinetics of the phage were markedly slowed in the presence of its bacterial target in the gut, suggesting sustained bacteriolytic activity in the ETEC-infected intestine. In conclusion, this study establishes a foundation for the development of phage-based therapies against ETEC.
Limited Microbial Contribution in Salt Lake Sediment and Water to Each Other’s Microbial Communities
Authors: Han Mingxian , Yu Huiying , Huang Jianrong , Wang Chuanxu , Li Xin , Wang Xiaodong , Xu Liu , Zhao Jingjing , Jiang Hongchen
Published: December 2024

Climate change and human activities have led to frequent exchanges of sedimentary and aquatic microorganisms in lakes. However, the ability of these microorganisms to survive in their respective habitats between saline lake sediment and water remains unclear. In this study, we investigated microbial sources and community composition and metabolic functions in sediments and water in Yuncheng Salt Lake using a combination of source tracking and Illumina MiSeq sequencing. The results showed that 0.10–8.47% of the microbial communities in the sediment came from the corresponding water bodies, while 0.12–10.78% of the sedimentary microorganisms contributed to the aquatic microbial populations, and the microbial contributions depended on the salinity difference between sediment and water. Habitat heterogeneity and salinity variations led to the differences in microbial diversity, community composition, and assembly between sediment and water communities. The assembly of sedimentary communities was mainly controlled by stochastic processes (>59%), whereas the assembly of aquatic communities was mainly controlled by deterministic processes (>88%). Furthermore, sediments had a higher potential for metabolic pathways related to specific biogeochemical functions than lake water. These results provide insights into the survival ability of microorganisms and the mechanisms of microbial community assembly under frequent exchange conditions in saline lakes.
Effects of the Symbiotic Chlorella variabilis on the Host Ciliate Paramecium bursaria Phenotypes
Authors: Kodama Yuuki , Fujishima Masahiro
Published: December 2024

Paramecium bursaria, a ciliated protist, forms a symbiotic relationship with the green alga Chlorella variabilis. This endosymbiotic association is a model system for studying the establishment of secondary symbiosis and interactions between the symbiont and its host organisms. Symbiotic algae reside in specialized compartments called perialgal vacuoles (PVs) within the host cytoplasm, which protect them from digestion by host lysosomal fusion. The relationship between P. bursaria and symbiotic Chlorella spp. is characterized by mutualism, in which both organisms benefit from this association. Furthermore, symbiotic algae also influence their host phenotypes, and algae-free P. bursaria can be obtained through various methods and reassociated with symbiotic algae, making it a valuable tool for studying secondary endosymbiosis. Recent advancements in genomic and transcriptomic studies on both hosts and symbionts have further enhanced the utility of this model system. This review summarizes the infection process of the symbiotic alga C. variabilis and its effects on the algal infection on number of host trichocysts, mitochondria, cytoplasmic crystals, total protein amount, stress responses, photoaccumulation, and circadian rhythms of the host P. bursaria.
Factors for Treatment Failure After Fecal Microbiota Transplantation in Clostridioides difficile Infection
Authors: Park Soo-Hyun , Lee Jung-Hwan , Lee Suhjoon , Shin Jongbeom , Cha Boram , Hong Ji-Taek , Kwon Kye Sook
Published: December 2024

Recently, fecal microbiota transplantation (FMT) has been introduced as an effective treatment option for Clostridioides difficile infection (CDI). However, the risk factors associated with FMT treatment failure have not been well demonstrated. Therefore, we aimed to investigate the risk factors of treatment failure or recurrence after FMT for CDI. This retrospective study included 124 patients with CDI who underwent FMT at Inha University Hospital between November 2017 and August 2021 and were followed up for 8 weeks after FMT for symptoms of CDI. FMT failure was defined as diarrhea recurrence or a positive stool test. We assessed the risk factors for treatment failure, including comorbidities, antibiotic use pre- and post-FMT, and the number of CDI episodes before FMT. Ninety-three patients (75%) experienced symptom improvement <7 days after FMT, while treatment failure occurred in 40 patients (32.3%). Multivariate analysis revealed that males had a lower symptom improvement rate <7 days after FMT (p = 0.049). Patients using antibiotics after FMT showed a higher rate of recurrence or treatment failure in <8 weeks (p = 0.032). Patients requiring antibiotics after FMT should be considered at higher risk of treatment failure. Careful antibiotic stewardship, particularly minimizing non-essential antibiotic use before and after FMT, may significantly enhance treatment outcomes. Further large-scale prospective studies are warranted to confirm these findings and develop targeted antibiotic management protocols for improving the efficacy of FMT in CDI treatment.
Graphitic Carbon Nitride Confers Bacterial Tolerance to Antibiotics in Wastewater Relating to ATP Depletion
Authors: Liu Shuo , Teng Lin , Ping Jiantao
Published: December 2024

Graphitic carbon nitride (C3N4) is a kind of visible light-responsive photocatalyst that has been of great interest in wastewater treatment. However, its environmental impact and biological effect remains to be elucidated. This study investigated the effect of C3N4 nanosheets on bacterial abundance and antibiotic tolerance in wastewater. Interestingly, as compared to the wastewater containing the antibiotic ofloxacin alone, the wastewater containing both ofloxacin and C3N4 had much higher numbers of total living bacteria, but lower levels of the ofloxacin-resistant bacteria and the ofloxacin-resistant gene qnrS. The model bacterium Staphylococcus aureus was then used to explore the mechanism of C3N4-induced antibiotic tolerance. The nanosheets neither adsorbed the antibiotic nor promoted drug efflux, uncovering that drug adsorption and efflux were not involved in antibiotic tolerance. Further investigations revealed that the nanosheets, like arsenate and menadione, drastically reduced ATP levels and induced the production of reactive oxygen species for enhanced antibiotic tolerance. This study revealed an antibiotic-tolerating mechanism associated with C3N4-induced ATP depletion, and shed a light on the effect of photocatalysts on microbial ecology during their application in wastewater treatment.
Berries, Leaves, and Flowers of Six Hawthorn Species (Crataegus L.) as a Source of Compounds with Nutraceutical Potential
Authors: Żurek Natalia , Świeca Michał , Kapusta Ireneusz Tomasz
Published: December 2024

Designing new forms of food, food additives, and nutraceuticals is necessary due to the growing needs of consumers, as well as the inflammation of civilization diseases, the prevention and treatment of which can be significantly supported by dietary intervention. For this reason, this study aimed to obtain highly bioactive preparations in the form of powders from the fruits, leaves, and flowers of six species of hawthorn (Crataegus L.) using solid phase extraction (SPE). Ultra-performance liquid chromatography analysis (UPLC-PDA-MS/MS) showed a high concentration of phenolic compounds (in the range from 31.50 to 66.06 mg/g), including the highest concentration in hawthorn fruit preparations. Fruit preparations also showed the highest antioxidant activity (through scavenging of O2˙− and OH˙ radicals), antidiabetic activity (inhibition of α-amylase and α-glucosidase), and anticancer activity, mainly against colon cancer cells (Caco-2). At the same time, hawthorn flower preparations showed the highest biocompatibility against normal colon cells (CCD841CoN) and anti-inflammatory activity (trypsin inhibition). Correlation and principal component analysis (PCA) showed that the health-promoting potential was most influenced by the content of falavan-3-ols. The above findings provide a basis for the industrial use of the developed preparations, which is in line with the current trend in food technology related to the search for new sources of bioactive compounds and the design of highly bioactive food.
Phytochemical Analysis and Antidiarrheal Activity of Stem Bark Decoctions of Pentadesma butyracea Sabine (Clusiaceae)
Authors: Mayindza Ekaghba Ericka , Grenet Manon , Gandolfo Pierrick , Loutelier-Bourhis Corinne , Schmitz Isabelle , Afonso Carlos , Lerouge Patrice , Mengome Line
Published: December 2024

Pentadesma butyracea is a medicinal plant of which bark decoctions are used in traditional medicine for the treatment of diarrhea symptoms in Gabon. The aim of the present work was to perform phytochemical and pharmacological analyses of decoctions of P. butyracea bark. In a principal approach, spectrophotometric analyses were used to quantify phenolic compounds, followed by liquid chromatography coupled to mass spectrometry analysis that allowed the identification of flavanone–flavone dimers as the main metabolites. Pharmacological analyses showed the absence of toxicity, thus confirming the safety of use of this decoction in traditional medicine. The antioxidant activity of the bark decoctions was demonstrated to depend on their phenolic contents. The decoction of stem barks harvested during the rainy season also induced a dose-dependent relaxation of isolated ileum fragments from Wistar rats. In addition, the antidiarrheal activity of P. butyracea barks was investigated against castor oil-induced diarrhea. The oral administration of different concentrations of this decoction led to a decrease in wet stools, indicating an antidiarrheal effect at the doses that were used. These results encourage the deepening of bio-guided research on P. butyracea bark decoctions in order to propose standard traditional medical treatments.
Atmospheric Pressure Chemical Ionization Q-Orbitrap Mass Spectrometry Analysis of Gas-Phase High-Energy Dissociation Routes of Triarylamine Derivatives
Authors: Wang Yi , Wu Shengxiu , Xu Shipan , Du Xuyang , Sun Yuanhui , Yan An , Zhou Guijiang , Yang Xiaolong
Published: December 2024

Triarylamine groups have been widely utilized in the development of high-performance charge-transporting or luminescent materials for fabricating organic light-emitting diodes (OLEDs). In this study, atmospheric pressure chemical ionization (APCI) Q-Orbitrap mass spectrometry was adopted to investigate the dissociation behaviors of these triarylamine derivatives. Specifically, taking [M+H]+ as the precursor ion, high-energy collision dissociation (HCD) experiments within the energy range from 0 to 80 eV were carried out. The results showed that triarylamine derivatives with specific structures exhibited distinct fragmentation patterns. For diarylamine, the formation of odd-electron ions was ascribed to the single-electron transfer (SET) reaction mediated by ion-neutral complexes (INCs). In the low-energy range (below 40 eV), proton transfer served as the predominant mechanism for generating even-electron ions. Conversely, in the high-energy range (60 eV and above), the INC-SET reaction dominated. The precursor ion’s structure affects compliance with the “even-electron rule”, which has exceptions. Here, even-electron ion fragmentation was energy-dependent and could deviate from the rule, yet did not conflict with its concept, reflecting dissociation complexity. This research provides insights for triarylamine-based OLED materials, facilitating analysis and identification, and is expected to aid OLED material development.
Current Role and Potential of Triple Quadrupole Mass Spectrometry in Biomedical Research and Clinical Applications
Authors: Tsakalof Andreas , Sysoev Alexey A. , Vyatkina Kira V. , Eganov Alexander A. , Eroshchenko Nikolay N. , Kiryushin Alexey N. , Adamov Alexey Yu. , Danilova Elena Yu. , Nosyrev Alexander E.
Published: December 2024

Mass-spectrometry-based assays nowadays play an essential role in biomedical research and clinical applications. There are different types of commercial mass spectrometers on the market today, and triple quadrupole (QqQ) is one of the time-honored systems. Here, we overview the main areas of QqQ applications in biomedicine and assess the current level, evolution, and trends in the use of QqQ in these areas. Relevant data were extracted from the Scopus database using the specified terms and Boolean operators defined for each field of the QqQ application. We also discuss the recent advances in QqQ and QqQ-based analytical platforms, which promote the clinical application of these systems, and explain the indicated substantial increase in triple quadrupole use in biomedicine. The number of biomedical studies utilizing QqQ increased 2–3 times this decade. Triple quadrupole is most intensively used in the field of endocrine research and testing. On the contrary, the relative rate of immunoassay utilization—a major competitor of chromatography–mass spectrometry—decreased in this area as well as its use within Therapeutic drug monitoring (TDM) and forensic toxicology. Nowadays, the applications of high-resolution accurate mass (HRAM) mass spectrometers in the investigated areas represent only a small fraction of the total amount of research using mass spectrometry; however, their application substantially increased during the last decade in the untargeted search for new biomarkers.
Synthesis of S-Glycoside Building Blocks as Mimetics of the Repeating d-GlcN-α-1,4-d-GlcA Heparan Sulfate Disaccharide
Authors: O’Shea Conor , Miller Gavin J.
Published: December 2024

Heparan sulfate (HS), a sulfated linear carbohydrate that decorates the cell surface and extracellular matrix, is a key regulator of biological processes. Owing to the inherent structural complexity of HS, structure-to-function studies with its ligands are required, and materials to improve the understanding of such interactions are therefore of high importance. Herein, the synthesis of novel S-linked GlcN-α(1→4)-GlcA disaccharide building blocks is detailed. Initial attempts at constructing the desired disaccharide using d-GlcN donors and d-Glc/GlcA acceptors via an S-glycosylation failed. Reversing the reactivity polarity of the monosaccharide building blocks enabled successful SN2 coupling using α-d-GlcN thiohemiacetals and d-galactosyl triflates. Subsequent C6-oxidation furnished the desired S-linked GlcN-α(1→4)-GlcA disaccharide building blocks on a gram scale. Such disaccharides offer potential for incorporation into wider synthetic HS sequences to provide glycomimetic tools.
FLi4X4− (X = Cl, Br, I): Superhalogen Anions with Planar Tetracoordinate Fluorine
Authors: Li Yong-Xia , Bai Li-Xia , Guo Jin-Chang
Published: December 2024

The concept of superhalogen was proposed for more than 40 years, and it has never been associated with planar tetracoordinate fluorine (ptF) species. In this work, using Li as the ligands and Cl, Br, I as the auxiliary atoms, we have designed the star-like D4h FLi4X4− (X = Cl, Br, I) clusters, which contain the ptF at the centers. They are all global minima (GMs) based on unbiased searches on the potential energy surfaces. Born–Oppenheimer molecular dynamics (BOMD) simulations suggest that these ptF structures are robust against dissociation at room temperature. Chemical bonding analyses indicate that there are four lone pairs (LPs) for ptF, three LPs for each X atom, and four 3c-2e Li–X–Li σ bonds. The stabilities of these ptF clusters are dominated by multicenter ionic bonding, rather than the σ aromaticity. Interestingly, these ptF species have large first vertical detachment energies (7.37, 6.94, and 6.30 eV). According to the definition of superhalogen, they can be viewed as superhalogen anions. The current work builds an important link between superhalogen and ptF chemistry.
Non-Contact Interaction Between Phorbol Myristate Acetate and Aqueous Alcohol Solutions Under Combined Magnetic Fields
Authors: Novikov Vadim V. , Yablokova Elena V. , Stepanov German O. , Rodionova Natalia N. , Tarasov Sergey A. , Buravleva Ekaterina V. , Yablonskaya Olga I. , Voeikov Vladimir L.
Published: December 2024

Previous research has demonstrated that a combined magnetic field (CMF) plays a critical role in modifying the properties of aqueous solutions, leading to an increase in the luminol-enhanced chemiluminescence of neutrophils. Using this model, the distant interaction between aqueous solutions was demonstrated, and the role of a CMF in the regulation of this phenomenon was established. In the current study, highly diluted (HD) phorbol myristate acetate (PMA) solution (the donor) was incubated with aqueous ethanol (the acceptor), both in a CMF-generating device and under geomagnetic field (GMF), for 0, 20, and 60 min. After a 60 min incubation at a 0 cm distance with HD PMA under both GMF and CMF, acceptor samples added to neutrophils increased neutrophil chemiluminescence by approximately sevenfold. The ability of HD PMA, which had been incubated with an acceptor, to activate ROS production diminished within 60 min of observation. However, the HD PMA sample remained an effective donor for up to 6 days after preparation. At a 10 cm distance between the donor and acceptor, the activation of the acceptor did not occur. These findings provide new insights into the phenomenon of distant interaction of solutions, whose mechanisms are suggested to be related to the quantum electrodynamics of water molecular dynamic structures.
Engineering Zn/Fe Mixed Metal Oxides with Tunable Structural and Magnetic Properties for Magnetic Particle Imaging
Authors: Zhang Qianyi , Sun Bing , Shanehsazzadeh Saeed , Bongers Andre , Gu Zi
Published: December 2024

Engineering magnetic nanoparticles with tunable structural properties and magnetism is critical to develop desirable magnetic particle imaging (MPI) tracers for biomedical applications. Here we present a new superparamagnetic metal oxide nanoparticle with a controllable chemical composition and magnetism for imaging tumor xenografts in living mice. Superparamagnetic Zn/Fe mixed metal oxide (ZnFe-MMO) nanoparticles are fabricated via a facile one-pot co-precipitation method in water followed by thermal decomposition with tunable Zn/Fe ratios and at various calcination temperatures. This work, for the first time, presented LDH-derived metal oxides for an MPI application. The metal composition is tunable to present an optimized MPI performance. The analytical results demonstrate that ZnFe-MMO nanoparticles at the designed molar ratio of Zn/Fe = 2:1 after 650 °C calcination demonstrate a higher saturation magnetization (MS) value and optimal MPI signal than the samples presented with other conditions. The excellent biocompatibility of ZnFe-MMO is demonstrated in both breast cancer cells and fibroblast cell cultures. In vivo imaging of 4T1 tumor xenografts in mice using ZnFe-MMO as a tracer showed that the mean signal intensity is 1.27-fold higher than the commercial tracer VivoTrax at 72 h post-injection, indicating ZnFe-MMO’s promise for prolonged MPI imaging applications.
Counteractive Effects of Copper Nanoparticles and Betacellulin on Ovarian Cells
Authors: Sirotkin Alexander V. , Romero-Navarro Paula , Loncová Barbora , Fabová Zuzana , Bartušová Michaela , Harrath Abdel Halim , Alonso Francisco
Published: December 2024

Copper nanoparticles (CuNPs) are known to affect many ovarian cell functions. CuNPs, prepared using a chemical reduction method, were fully characterized by different means (TEM, DLS, XRD, Z potential, XPS, and AES). The resulting colloidal suspension contained needle-like CuNPs aggregates made of a core of metallic copper and an oxidized surface of Cu2O and CuO. The separate and coupled effects of CuNPs and the growth factor betacellulin (BTC) were analyzed on the control of some basic functions of ovarian cells. With this purpose, porcine ovarian granulosa cells, together with CuNPs, BTC, and both (CuNPs + BTC), were cultured. Viability and BrDU tests, quantitative immunocytochemistry, TUNEL, and ELISA were used to evaluate markers of the S-phase (PCNA) and G-phase (cyclin B1) of the cell cycle, cell proliferation (BrDU incorporation), cytoplasmic/mitochondrial apoptosis (bax) and extrinsic (nuclear DNA fragmentation) markers, and the release of estradiol and progesterone. CuNPs were accumulated within the cells and were found to reduce all the markers of proliferation, but promoted all the markers of apoptosis and the release of steroid hormones. When added alone, BTC raised the expression of all cell viability and proliferation markers, depleted the expression of all apoptosis markers, and stimulated the release of both estradiol and progesterone. Furthermore, BTC prevented and even reversed the effect of CuNPs on all the measured parameters, whereas CuNPs mitigated BTC’s effect on all the analyzed cell functions. These results support a direct toxic effect of CuNPs and a stimulatory effect of BTC on ovarian cell functions, as well as the capability of BTC to protect against the adverse effects of CuNPs.
Quercetin Reduced and Stabilized Gold Nanoparticle/Al3+: A Rapid, Sensitive Optical Detection Nanoplatform for Fluoride Ion
Authors: Jayeoye Titilope John , Panghiyangani Roselina , Singh Sudarshan , Muangsin Nongnuj
Published: December 2024

In this contribution, facile synthesis of gold nanoparticles (AuNPs) at ambient conditions is reported based on the use of the polyphenolic compound quercetin (QT) as the reducing and stabilizing agent at room temperature (RT). Under alkali-induced pH adjustment of QT solution and stirring conditions at RT, QT could quickly reduce gold salt (Au3+) into its nanoparticle form (Au0), resulting in the formation of a sparkling red color colloidal solution (AuNPs) with an absorption maximum at 520 nm. Further, Fourier transform infrared spectroscopy (FTIR) was employed to showcase the role of QT in the nanomaterial’s synthesis process. The formed QT-AuNPs responded swiftly to Al3+ charging with color perturbation from red to grayish-purple, coupled with an absorption spectra red shift, owing to Al3+-induced aggregation of QT-AuNPs. However, when fluoride ion (F−) was pre-mixed with an optimized Al3+ concentration, reversed color changes from grayish-purple to red were observed with a blue shift in the absorption spectra. Simply put, F− formed a complex with Al3+, thus preventing Al3+-induced aggregation of QT-AuNPs. The analytical response A520/A650 was linear with F− concentration ranging from 25.0 to 250.0 µM and 250.0–600.0 µM, with a detection limit of 7.5 µM. The developed QT-AuNPs/Al3+ detection probe was selective to only F− charging, in comparison with other possible interfering anions. Real sample potentiality of the developed sensor was demonstrated on tap water samples, toothpaste, and fluoride-rich mouthwash, with reliable accuracy.
Recent Advances in DNA Origami-Enabled Optical Biosensors for Multi-Scenario Application
Authors: Hao Ziao , Kong Lijun , Ruan Longfei , Deng Zhengtao
Published: December 2024

Over the past few years, significant progress has been made in DNA origami technology due to the unrivaled self-assembly properties of DNA molecules. As a highly programmable, addressable, and biocompatible nanomaterial, DNA origami has found widespread applications in biomedicine, such as cell scaffold construction, antimicrobial drug delivery, and supramolecular enzyme assembly. To expand the scope of DNA origami application scenarios, researchers have developed DNA origami structures capable of actively identifying and quantitatively reporting targets. Optical DNA origami biosensors are promising due to their fast-to-use, sensitive, and easy implementation. However, the conversion of DNA origami to optical biosensors is still in its infancy stage, and related strategies have not been systematically summarized, increasing the difficulty of guiding subsequent researchers. Therefore, this review focuses on the universal strategies that endow DNA origami with dynamic responsiveness from both de novo design and current DNA origami modification. Various applications of DNA origami biosensors are also discussed. Additionally, we highlight the advantages of DNA origami biosensors, which offer a single-molecule resolution and high signal-to-noise ratio as an alternative to traditional analytical techniques. We believe that over the next decade, researchers will continue to transform DNA origami into optical biosensors and explore their infinite possible uses.