bluuebunny/crossref_metadata_2025 huggingface dataset:
Fractionation of Biomolecules in Withania coagulans Extract for Bioreductive Nanoparticle Synthesis, Antifungal and Biofilm Activity
Authors: Hasan Murtaza , Zafar Ayesha , Shahzadi Irum , Luo Fan , Hassan Shahbaz Gul , Tariq Tuba , Zehra Sadaf , Munawar Tauseef , Iqbal Faisal , Shu Xugang
Published: August 2020

Withania coagulans contains a complex mixture of various bioactive compounds. In order to reduce the complexity of the plant extract to purify its phytochemical biomolecules, a novel fractionation strategy using different solvent combination ratios was applied to isolate twelve bioactive fractions. These fractions were tested for activity in the biogenic synthesis of cobalt oxide nanoparticles, biofilm and antifungal activities. The results revealed that plant extract with bioactive fractions in 30% ratio for all solvent combinations showed more potent bioreducing power, according to the observed color changes and the appearance of representative absorption peaks at 500–510 nm in the UV-visible spectra which confirm the synthesis of cobalt oxide nanoparticles (Co3O4 NPs). XRD diffraction was used to define the crystal structure, size and phase composition of the products. The fractions obtained using 90% methanol/hexane and 30% methanol/hexane showed more effectiveness against biofilm formation by Pseudomonas aeruginosa and Staphylococcus aureus so these fractions could potentially be used to treat bacterial infections. The 90% hexane/H2O fraction showed excellent antifungal activity against Aspergillus niger and Candida albicans, while the 70% methanol/hexane fraction showed good antifungal activity for C. albicans, so these fractions are potentially useful for the treatment of various fungal infections. On the whole it was concluded that fractionation based on effective combinations of methanol/hexane was useful to investigate and study bioactive compounds, and the active compounds from these fractions may be further purified and tested in various clinical trials.
Cocaine Self-Administration and Abstinence Modulate NMDA Receptor Subunits and Active Zone Proteins in the Rat Nucleus Accumbens
Authors: Smaga Irena , Wydra Karolina , Frankowska Małgorzata , Fumagalli Fabio , Sanak Marek , Filip Małgorzata
Published: August 2020

Cocaine-induced plasticity in the glutamatergic transmission and its N-methyl-d-aspartate (NMDA) receptors are critically involved in the development of substance use disorder. The presynaptic active zone proteins control structural synaptic plasticity; however, we are still far from understanding the molecular determinants important for cocaine seeking behavior. The aim of this study was to investigate the effect of cocaine self-administration and different conditions of cocaine forced abstinence on the composition of the NMDA receptor subunits and on the levels of active zone proteins, i.e., Ras-related protein 3A (Rab3A), Rab3 interacting molecules 1 (RIM1) and mammalian uncoordinated protein 13 (Munc13) in the rat nucleus accumbens. We found an up-regulation of the accumbal levels of GluN1 and GluN2A following cocaine self-administration that was paralleled by an increase of Munc13 and RIM1 levels. At the same time, we also demonstrated that different conditions of cocaine abstinence abolished changes in NMDA receptor subunits (except for higher GluN1 levels after cocaine abstinence with extinction training), while an increase in the Munc13 concentration was shown in rats housed in an enriched environment. In conclusion, cocaine self-administration is associated with the specific up-regulation of the NMDA receptor subunit composition and is related with new presynaptic targets controlling neurotransmitter release. Moreover, changes observed in cocaine abstinence with extinction training and in an enriched environment in the levels of NMDA receptor subunit and in the active zone protein, respectively, may represent a potential regulatory step in cocaine-seeking behavior.
Synthesis and Biological Activity of Benzamides Substituted with Pyridine-Linked 1,2,4-Oxadiazole
Authors: Yang Sen , Tian Xiao-Yu , Ma Tian-Yang , Dai Li , Ren Chao-Li , Mei Jun-Chang , Liu Xing-Hai , Tan Cheng-Xia
Published: August 2020

To find pesticidal lead compounds with high activity, a series of novel benzamides substituted with pyridine-linked 1,2,4-oxadiazole were designed by bioisosterism, and synthesized easily via esterification, cyanation, cyclization and aminolysis reactions. The structures of the target compounds were confirmed by 1H-NMR, 13C-NMR and HRMS. The preliminary bioassay showed that most compounds had good larvicidal activities against mosquito larvae at 10 mg/L, especially compound 7a, with a larvicidal activity as high as 100%, and even at 1 mg/L was still 40%; at 50 mg/L, all the target compounds showed good fungicidal activities against the eight tested fungi. Moreover, compound 7h exhibited better inhibitory activity (90.5%) than fluxapyroxad (63.6%) against Botrytis cinereal. Therefore, this type of compound can be further studied.
Post-Translational Modifications of Extracellular Proteasome
Authors: Tsimokha Anna S. , Artamonova Tatiana O. , Diakonov Egor E. , Khodorkovskii Mikhail A. , Tomilin Alexey N.
Published: August 2020

The ubiquitin-proteasome system (UPS) is one of the major protein degradation pathways in eukaryotic cells. Abnormal functioning of this system has been observed in cancer and neurological diseases. The 20S proteasomes, essential components of the UPS, are present not only within the cells but also in the extracellular space, and their concentration in blood plasma has been found to be elevated and dependent upon the disease state, being of prognostic significance in patients suffering from cancer, liver diseases, and autoimmune diseases. However, functions of extracellular proteasomes and mechanisms of their release by cells remain largely unknown. The main mechanism of proteasome activity regulation is provided by modulation of their composition and post-translational modifications (PTMs). Moreover, diverse PTMs of proteins are known to participate in the loading of specific elements into extracellular vesicles. Since previous studies have revealed that the transport of extracellular proteasomes may occur via extracellular vesicles, we have set out to explore the PTMs of extracellular proteasomes in comparison to cellular counterparts. In this work, cellular and extracellular proteasomes were affinity purified and separated by SDS-PAGE for subsequent trypsinization and matrix-assisted laser desorption/ionization (MALDI) Fourier transform ion cyclotron resonance (FT-ICR) mass spectrometry (MS) analysis. In total, we could identify 64 and 55 PTM sites in extracellular and cellular proteasomes, respectively, including phosphorylation, ubiquitination, acetylation, and succinylation. We observed novel sites of acetylation at K238 and K192 of the proteasome subunits β2 and β3, respectively, that are specific for extracellular proteasomes. Moreover, cellular proteasomes show specific acetylation at K227 of α2 and ubiquitination at K201 of β3. Interestingly, succinylation of β6 at the residue K228 seems not to be present exclusively in extracellular proteasomes, whereas both extracellular and cellular proteasomes may also be acetylated at this site. The same situation takes place at K201 of the β3 subunit where ubiquitination is seemingly specific for cellular proteasomes. Moreover, crosstalk between acetylation, ubiquitination, and succinylation has been observed in the subunit α3 of both proteasome populations. These data will serve as a basis for further studies, aimed at dissection of the roles of extracellular proteasome-specific PTMs in terms of the function of these proteasomes and mechanism of their transport into extracellular space.
Physicochemical, Spectroscopic, and Chromatographic Analyses in Combination with Chemometrics for the Discrimination of the Geographical Origin of Greek Graviera Cheeses
Authors: Vatavali Kornilia A. , Kosma Ioanna S. , Louppis Artemis P. , Badeka Anastasia V. , Kontominas Michael G.
Published: August 2020

Seventy-eight graviera cheese samples produced in five different regions of Greece were characterized and discriminated according to geographical origin. For the above purpose, pH, titratable acidity (TA), NaCl, proteins, fat on a dry weight basis, ash, fatty acid composition, volatile compounds, and minerals were determined. Both multivariate analysis of variance (MANOVA) and linear discriminant analysis (LDA) were applied to experimental data to achieve sample geographical discrimination. The results showed that the combination of fatty acid composition plus minerals provided a correct classification rate of 89.7%. The value for the combination of fatty acid compositions plus conventional quality parameters was 94.9% and for the combination of minerals plus conventional quality parameters was 97.4%. When cheeses of the above five geographical origins were combined with previously studied graviera cheeses from six other geographical origins collected during the same seasons in Greece, the respective values for the discrimination of geographical origin of all eleven origins were 89.3% for conventional quality parameters plus minerals; 94.0% for conventional quality parameters plus fatty acids; 94.1% for minerals plus fatty acids; and 95.2% for conventional quality parameters plus minerals plus fatty acids. Such high correct classification rates demonstrate the robustness of the developed statistical model.
Fused 1,5-Naphthyridines: Synthetic Tools and Applications
Authors: Masdeu Carme , Fuertes Maria , Martin-Encinas Endika , Selas Asier , Rubiales Gloria , Palacios Francisco , Alonso Concepcion
Published: August 2020

Heterocyclic nitrogen compounds, including fused 1,5-naphthyridines, have versatile applications in the fields of synthetic organic chemistry and play an important role in the field of medicinal chemistry, as many of them have a wide range of biological activities. In this review, a wide range of synthetic protocols for the construction of this scaffold are presented. For example, Friedländer, Skraup, Semmlere-Wolff, and hetero-Diels-Alder, among others, are well known classical synthetic protocols used for the construction of the main 1,5-naphthyridine scaffold. These syntheses are classified according to the nature of the cycle fused to the 1,5-naphthyridine ring: carbocycles, nitrogen heterocycles, oxygen heterocycles, and sulphur heterocycles. In addition, taking into account the aforementioned versatility of these heterocycles, their reactivity is presented as well as their use as a ligand for metal complexes formation. Finally, those fused 1,5-naphthyridines that present biological activity and optical applications, among others, are indicated.
Cranberry Polyphenols and Prevention against Urinary Tract Infections: Relevant Considerations
Authors: González de Llano Dolores , Moreno-Arribas M. Victoria , Bartolomé Begoña
Published: August 2020

Cranberry (Vaccinium macrocarpon) is a distinctive source of polyphenols as flavonoids and phenolic acids that has been described to display beneficial effects against urinary tract infections (UTIs), the second most common type of infections worldwide. UTIs can lead to significant morbidity, especially in healthy females due to high rates of recurrence and antibiotic resistance. Strategies and therapeutic alternatives to antibiotics for prophylaxis and treatment against UTIs are continuously being sought after. Different to cranberry, which have been widely recommended in traditional medicine for UTIs prophylaxis, probiotics have emerged as a new alternative to the use of antibiotics against these infections and are the subject of new research in this area. Besides uropathogenic Escherichia coli (UPEC), the most common bacteria causing uncomplicated UTIs, other etiological agents, such as Klebsiellapneumoniae or Gram-positive bacteria of Enterococcus and Staphylococcus genera, seem to be more widespread than previously appreciated. Considerable current effort is also devoted to the still-unraveled mechanisms that are behind the UTI-protective effects of cranberry, probiotics and their new combined formulations. All these current topics in the understanding of the protective effects of cranberry against UTIs are reviewed in this paper. Further progresses expected in the coming years in these fields are also discussed.
Analysis of the Effect of the Biomass Torrefaction Process on Selected Parameters of Dust Explosivity
Authors: Bajcar Marcin , Saletnik Bogdan , Zaguła Grzegorz , Puchalski Czesław
Published: August 2020

This article presents the findings of a study investigating the explosion and combustion parameters of dust from the raw biomass of wheat straw and energy willow and from the products of biomass torrefaction generated at temperatures ranging from 220 to 300 °C. Agricultural waste and energy crops and their modifications, e.g., in the torrefaction process, did not find a place in explosive risk research, which the authors decided to present in their work. The study was designed to estimate explosion hazard during the processing of the materials into fuels and during the storage process. The measurements recorded a maximum explosion pressure Pmax in the case of dust from biomass ranging from 7.2 to 7.3 bar and for dust from torrefied materials amounting to 7.5–9.2 bar, and a maximum rate of pressure rise over time (dp/dt)max in raw biomass ranging from 201.4 to 261.3 bar/s and in torrefied materials amounting to 209.6–296.6 bar/s. The estimated explosion index Kstmax for raw biomass was 55–72 m*bar/s and for torrefied materials was in the range from 57 to 81 m*bar/s. In the results, the authors present values for specific types of fuel which differ significantly depending on the type of biomass. The research findings show that the torrefaction process used in fuel production is not associated with a significantly greater risk of explosion and the materials obtained may safely be used as an alternative to conventional solid fuels. Given the growing interest in the use of biomass and in the variety of biomass processing methods for energy-related purposes, it seems there is a need for research to develop appropriate guidelines and for effective practices to be introduced in the energy industry in order to ensure the safety of the processes used in the production of novel fuels especially in small installations converting these materials into more efficient energy material.
Flavonoids and Terpenoids with PTP-1B Inhibitory Properties from the Infusion of Salvia amarissima Ortega
Authors: Salinas-Arellano Eric , Pérez-Vásquez Araceli , Rivero-Cruz Isabel , Torres-Colin Rafael , González-Andrade Martín , Rangel-Grimaldo Manuel , Mata Rachel
Published: August 2020

An infusion prepared from the aerial parts of Salvia amarissima Ortega inhibited the enzyme protein tyrosine phosphatase 1B (PTP-1B) (IC50~88 and 33 μg/mL, respectively). Phytochemical analysis of the infusion yielded amarisolide (1), 5,6,4′-trihydroxy-7,3′-dimethoxyflavone (2), 6-hydroxyluteolin (3), rutin (4), rosmarinic acid (5), isoquercitrin (6), pedalitin (7) and a new neo-clerodane type diterpenoid glucoside, named amarisolide G (8a,b). Compound 8a,b is a new natural product, and 2–6 are reported for the first time for the species. All compounds were tested for their inhibitory activity against PTP-1B; their IC50 values ranged from 62.0 to 514.2 μM. The activity was compared to that of ursolic acid (IC50 = 29.14 μM). The most active compound was pedalitin (7). Docking analysis predicted that compound 7 has higher affinity for the allosteric site of the enzyme. Gas chromatography coupled to mass spectrometry analyses of the essential oils prepared from dried and fresh materials revealed that germacrene D (15) and β-selinene (16), followed by β-caryophyllene (13) and spathulenol (17) were their major components. An ultra-high performance liquid chromatography coupled to mass spectrometry method was developed and validated to quantify amarisolide (1) in the ethyl acetate soluble fraction of the infusion of S. amarissima.
Dissolving Cellulose in 1,2,3-Triazolium- and Imidazolium-Based Ionic Liquids with Aromatic Anions
Authors: Brehm Martin , Radicke Julian , Pulst Martin , Shaabani Farzaneh , Sebastiani Daniel , Kressler Jörg
Published: August 2020

We present 1,2,3-triazolium- and imidazolium-based ionic liquids (ILs) with aromatic anions as a new class of cellulose solvents. The two anions in our study, benzoate and salicylate, possess a lower basicity when compared to acetate and therefore should lead to a lower amount of N-heterocyclic carbenes (NHCs) in the ILs. We characterize their physicochemical properties and find that all of them are liquids at room temperature. By applying force field molecular dynamics (MD) simulations, we investigate the structure and dynamics of the liquids and find strong and long-lived hydrogen bonds, as well as significant π–π stacking between the aromatic anion and cation. Our ILs dissolve up to 8.5 wt.-% cellulose. Via NMR spectroscopy of the solution, we rule out chain degradation or derivatization, even after several weeks at elevated temperature. Based on our MD simulations, we estimate the enthalpy of solvation and derive a simple model for semi-quantitative prediction of cellulose solubility in ILs. With the help of Sankey diagrams, we illustrate the hydrogen bond network topology of the solutions, which is characterized by competing hydrogen bond donors and acceptors. The hydrogen bonds between cellulose and the anions possess average lifetimes in the nanosecond range, which is longer than found in common pure ILs.
New Series of Double-Modified Colchicine Derivatives: Synthesis, Cytotoxic Effect and Molecular Docking
Authors: Krzywik Julia , Aminpour Maral , Maj Ewa , Mozga Witold , Wietrzyk Joanna , Tuszyński Jack A. , Huczyński Adam
Published: August 2020

Colchicine is a well-known anticancer compound showing antimitotic effect on cells. Its high cytotoxic activity against different cancer cell lines has been demonstrated many times. In this paper we report the syntheses and spectroscopic analyses of novel colchicine derivatives obtained by structural modifications at C7 (carbon-nitrogen single bond) and C10 (methylamino group) positions. All the obtained compounds have been tested in vitro to determine their cytotoxicity toward A549, MCF-7, LoVo, LoVo/DX, and BALB/3T3 cell lines. The majority of obtained derivatives exhibited higher cytotoxicity than colchicine, doxorubicin and cisplatin against the tested cancerous cell lines. Additionally, most of the presented derivatives were able to overcome the resistance of LoVo/DX cells. Additionally, their mode of binding to β-tubulin was evaluated in silico. Molecular docking studies showed that apart from the initial amides 1 and 2, compound 14, which had the best antiproliferative activity (IC50 = 0.1–1.6 nM), stood out also in terms of its predicted binding energy and probably binds best into the active site of βI-tubulin isotype.
Tensegrity Modelling and the High Toughness of Spider Dragline Silk
Authors: Fraternali Fernando , Stehling Nicola , Amendola Ada , Tiban Anrango Bryan Andres , Holland Chris , Rodenburg Cornelia
Published: August 2020

This work establishes a tensegrity model of spider dragline silk. Tensegrity systems are ubiquitous in nature, being able to capture the mechanics of biological shapes through simple and effective modes of deformation via extension and contraction. Guided by quantitative microstructural characterization via air plasma etching and low voltage scanning electron microscopy, we report that this model is able to capture experimentally observed phenomena such as the Poisson effect, tensile stress-strain response, and fibre toughness. This is achieved by accounting for spider silks’ hierarchical organization into microfibrils with radially variable properties. Each fibril is described as a chain of polypeptide tensegrity units formed by crystalline granules operating under compression, which are connected to each other by amorphous links acting under tension. Our results demonstrate, for the first time, that a radial variability in the ductility of tensegrity chains is responsible for high fibre toughness, a defining and desirable feature of spider silk. Based on this model, a discussion about the use of graded tensegrity structures for the optimal design of next-generation biomimetic fibres is presented.
Melanin and Melanin-Like Hybrid Materials in Regenerative Medicine
Authors: Cavallini Chiara , Vitiello Giuseppe , Adinolfi Barbara , Silvestri Brigida , Armanetti Paolo , Manini Paola , Pezzella Alessandro , d’Ischia Marco , Luciani Giuseppina , Menichetti Luca
Published: August 2020

Melanins are a group of dark insoluble pigments found widespread in nature. In mammals, the brown-black eumelanins and the reddish-yellow pheomelanins are the main determinants of skin, hair, and eye pigmentation and play a significant role in photoprotection as well as in many biological functions ensuring homeostasis. Due to their broad-spectrum light absorption, radical scavenging, electric conductivity, and paramagnetic behavior, eumelanins are widely studied in the biomedical field. The continuing advancements in the development of biomimetic design strategies offer novel opportunities toward specifically engineered multifunctional biomaterials for regenerative medicine. Melanin and melanin-like coatings have been shown to increase cell attachment and proliferation on different substrates and to promote and ameliorate skin, bone, and nerve defect healing in several in vivo models. Herein, the state of the art and future perspectives of melanins as promising bioinspired platforms for natural regeneration processes are highlighted and discussed.
Attenuating Effect of Peruvian Cocoa Populations on the Acute Asthmatic Response in Brown Norway Rats
Authors: Périz Marta , Pérez-Cano Francisco J. , Cambras Trinitat , Franch Àngels , Best Ivan , Pastor-Soplin Santiago , Castell Margarida , Massot-Cladera Malén
Published: August 2020

Cocoa contains bioactive components, which vary according to genetic and environmental factors. The present study aimed to ascertain the anti-allergic properties of native Peruvian cocoa populations (“Blanco de Piura” or BPC, “Amazonas Peru” or APC, “Criollo de Montaña” or CMC, “Chuncho” or CCC, and an ordinary cocoa or OC). To do so, after an initial in vitro approach, an in vivo study focused on the induction of an anaphylactic response associated with allergic asthma in Brown Norway rats was carried out. Based on their polyphenol content, antioxidant activity and in vitro effects, the APC and CMC were selected to be included in the in vivo study. Cocoa diets were tested in a model of allergic asthma in which anaphylactic response was assessed by changes in body temperature, motor activity and body weight. The concentration of specific immunoglobulin E (IgE), mast cell protease and leukotrienes was also quantified in serum and/or bronchoalveolar lavage fluid. CMC and OC populations exhibited a protective effect on the allergic asthma rat model as evidenced by means of a partial protection against anaphylactic response and, above all, in the synthesis of IgE and the release of mast cell protease.
Vanillin Prevents Doxorubicin-Induced Apoptosis and Oxidative Stress in Rat H9c2 Cardiomyocytes
Authors: Sirangelo Ivana , Sapio Luigi , Ragone Angela , Naviglio Silvio , Iannuzzi Clara , Barone Daniela , Giordano Antonio , Borriello Margherita
Published: August 2020

Doxorubicin (doxo) is an effective anticancer compound in several tumor types. However, as a consequence of oxidative stress induction and ROS overproduction, its high cardiotoxicity demands urgent attention. Vanillin possesses antioxidant, antiproliferative, antidepressant and anti-glycating properties. Therefore, we investigated the potential vanillin protective effects against doxo-induced cardiotoxicity in H9c2 cells. Using multiparametric approach, we demonstrated that vanillin restored both cell viability and damage in response to doxo exposure. Contextually, vanillin decreased sub-G1 appearance and caspase-3 and PARP1 activation, reducing the doxo-related apoptosis induction. From a mechanistic point of view, vanillin hindered doxo-induced ROS accumulation and impaired the ERK phosphorylation. Notably, besides the cardioprotective effects, vanillin did not counteract the doxo effectiveness in osteosarcoma cells. Taken together, our results suggest that vanillin ameliorates doxo-induced toxicity in H9c2 cells, opening new avenues for developing alternative therapeutic approaches to prevent the anthracycline-related cardiotoxicity and to improve the long-term outcome of antineoplastic treatment.
Dietary and Lifestyle Changes During COVID-19 and the Subsequent Lockdowns among Polish Adults: A Cross-Sectional Online Survey PLifeCOVID-19 Study
Authors: Górnicka Magdalena , Drywień Małgorzata Ewa , Zielinska Monika A. , Hamułka Jadwiga
Published: August 2020

The present study aimed to identify patterns of dietary changes during the COVID-19 pandemic and their associations with sociodemographics, body mass index (BMI) before pandemic, and lifestyle changes in Polish adults and to examine the effects of lockdowns on dietary–lifestyle changes. This study used a cross-sectional online survey to collect data. The k-means algorithm was used to determine of patterns of dietary changes, and logistic regression analyses were performed. During the study period, 43% of respondents decreased physical activity (PA), 49%—increased screen time, and 34%—increased food consumption. Among the three dietary changes patterns, two opposite patterns were found: Prohealthy (28% participants) and Unhealthy (19% participants).The adherence to the Prohealthy pattern was negatively associated with age, but positively with being overweight (aOR 1.31) or obese before pandemic (aOR 1.64). Residing in a macroeconomic region with GDP > 100% decreased adherence to the Prohealthy (aOR 0.73) but increased adherence to the Unhealthy pattern (aOR 1.47). Adults over 40 years old, those living with children, unemployed, those living in a region with a higher GDP, and those not consuming homemade meals could be more exposed to unhealthy behaviors. From a public health perspective, enhancing the message “to be active” during the compulsory isolation period should be prioritized.
Copper (II) Metallodendrimers Combined with Pro-Apoptotic siRNAs as a Promising Strategy Against Breast Cancer Cells
Authors: Sanz del Olmo Natalia , Holota Marcin , Michlewska Sylwia , Gómez Rafael , Ortega Paula , Ionov Maksim , de la Mata Francisco Javier , Bryszewska Maria
Published: August 2020

Cancer treatment with small interfering RNA (siRNA) is one of the most promising new strategies; however, transfection systems that increase its bioavailability and ensure its delivery to the target cell are necessary. Transfection systems may be just vehicular or could contain fragments with anticancer activity that achieves a synergistic effect with siRNA. Cationic carbosilane dendrimers have proved to be powerful tools as non-viral vectors for siRNA in cancer treatment, and their activity might be potentiated by the inclusion of metallic complexes in its dendritic structure. We have herein explored the interaction between Schiff-base carbosilane copper (II) metallodendrimers, and pro-apoptotic siRNAs. The nanocomplexes formed by metallodendrimers and different siRNA have been examined for their zeta potential and size, and by transmission electron microscopy, fluorescence polarisation, circular dichroism, and electrophoresis. The internalisation of dendriplexes has been estimated by flow cytometry and confocal microscopy in a human breast cancer cell line (MCF-7), following the ability of these metallodendrimers to deliver the siRNA into the cell. Finally, in vitro cell viability experiments have indicated effective interactions between Cu (II) dendrimers and pro-apoptotic siRNAs: Mcl-1 and Bcl-2 in breast cancer cells. Combination of the first-generation derivatives with chloride counterions and with siRNA increases the anticancer activity of the dendriplex constructs and makes them a promising non-viral vector.
Wide-Angle Beam-Steering Using an Optical Phased Array with Non-Uniform-Width Waveguide Radiators
Authors: Kim Youngin , Yoon Hyeonho , You Jong-Bum , Kim Minchul , Park Hyo-Hoon
Published: August 2020

We demonstrate wide-angle beam-steering using an optical phased array (OPA) with waveguide radiators designed with non-uniform widths to reduce the crosstalk between waveguides. The OPA consists of a silicon based 1 × 16 array of electro-optic phase shifters and end-fire radiators. The 16 radiators were configured with four different widths and a half-wavelength spacing, which can remove the higher-order diffraction patterns in free space. The waveguides showed a low crosstalk of −10.2 dB at a wavelength of 1540 nm. With phase control, the OPA achieved wide beam-steering of over ±80° with a side-lobe suppression of 7.4 dB.
An Analysis of the Italian Lockdown in Retrospective Using Particle Swarm Optimization in Machine Learning Applied to an Epidemiological Model
Authors: Paggi Marco
Published: August 2020

A critical analysis of the open data provided by the Italian Civil Protection Centre during phase 1 of Covid-19 epidemic—the so-called Italian lockdown—is herein proposed in relation to four of the most affected Italian regions, namely Lombardy, Reggio Emilia, Valle d’Aosta, and Veneto. A possible bias in the data induced by the extent in the use of medical swabs is found in relation to Valle d’Aosta and Veneto. Observed data are then interpreted using a Susceptible-Infectious-Recovered (SIR) epidemiological model enhanced with asymptomatic (infected and recovered) compartments, including lockdown effects through time-dependent model parameters. The initial number of susceptible individuals for each region is also considered as a parameter to be identified. The issue of parameters identification is herein addressed by a robust machine learning approach based on particle swarm optimization. Model predictions provide relevant information for policymakers in terms of the effect of lockdown measures in the different regions. The number of susceptible individuals involved in the epidemic, important for a safe release of lockdown during the next phases, is predicted to be around 10% of the population for Lombardy, 16% for Reggio Emilia, 18% for Veneto, and 40% for Valle d’Aosta.
Genetic Transformation in Peach (Prunus persica L.): Challenges and Ways Forward
Authors: Ricci Angela , Sabbadini Silvia , Prieto Humberto , Padilla Isabel MG , Dardick Chris , Li Zhijian , Scorza Ralph , Limera Cecilia , Mezzetti Bruno , Perez-Jimenez Margarita , Burgos Lorenzo , Petri Cesar
Published: August 2020

Almost 30 years have passed since the first publication reporting regeneration of transformed peach plants. Nevertheless, the general applicability of genetic transformation of this species has not yet been established. Many strategies have been tested in order to obtain an efficient peach transformation system. Despite the amount of time and the efforts invested, the lack of success has significantly limited the utility of peach as a model genetic system for trees, despite its relatively short generation time; small, high-quality genome; and well-studied genetic resources. Additionally, the absence of efficient genetic transformation protocols precludes the application of many biotechnological tools in peach breeding programs. In this review, we provide an overview of research on regeneration and genetic transformation in this species and summarize novel strategies and procedures aimed at producing transgenic peaches. Promising future approaches to develop a robust peach transformation system are discussed, focusing on the main bottlenecks to success including the low efficiency of A. tumefaciens-mediated transformation, the low level of correspondence between cells competent for transformation and those that have regenerative competence, and the high rate of chimerism in the few shoots that are produced following transformation.
Platyhypnidium aquaticum as Bioindicator of Metal and Metalloid Contamination of River Water in a Neotropical Mountain City
Authors: Benítez Ángel , Torres Samuel , Morocho Ramiro , Carrillo Washington , Donoso David A. , Calva James
Published: August 2020

Water contamination is a major environmental problem in many cities of the world. Most water contamination results from industry and human activities that generate toxic substances (e.g., metals). Rheophilic and aquatic mosses are found in lotic ecosystems, and their morphological and physiological traits are responsive to ecological and pollution gradients. Here we hypothesized that the native rheophilic moss Platyhypnidium aquaticum (A. Jaeger) M. Fleisch exposed to polluted waters can bioaccumulate greater amounts of metals, and a metalloid, than P. aquaticum exposed to pollution-free water. To this aim, we tested the bioindicator capacity of the aquatic P. aquaticum for 15 metals (Cd, Pb, Zn, Fe, K, Ca, Na, Mn, V, Co, Ba, Cr, Al, Sr, and Mg) and one metalloid (As), in twelve river samples coming from three urban and one control zone along the Zamora river in the city of Loja. When compared to the control, our results showed that P. aquaticum in the Southern, Central, and Northern zones of the city bioaccumulated higher concentrations of Ba, Cd, Co, Fe, Mg, Mn, Na, Sr, Zn, and the metalloid As. On the other hand, concentrations of Al, Ca, Cr, Pb, and V in P. aquaticum tended to be lower in the control zone, but these differences were not significant. We suggest that the presence of these contaminants may be related to water pollution (e.g., residual discharges and a lack of treatment systems) along urban zones of the river. We report for the first time the utility of P. aquaticum as a model species for development of long-term biomonitoring programs of water contamination in South America. Passive biomonitoring with P. aquaticum can be a simple and low-cost method to obtain reliable data of the current state of water contamination with metals and metalloids in tropical regions.
Effects of Gibberellin (GA4+7) in Grain Filling, Hormonal Behavior, and Antioxidants in High-Density Maize (Zea mays L.)
Authors: Cui Wenwen , Song Quanhao , Zuo Bingyun , Han Qingfang , Jia Zhikuan
Published: August 2020

Dense plant cultivation is an efficient approach to improve maize production by maximizing the utilization of energy and nutrients. However, dense plant populations may aggravate the abortion rate of young grains, resulting in fewer kernels per ear. The rate and duration of grain-filling play decisive roles in maize grain yield. Therefore, to increase plant density, enhancing the grain-filling rate, extending the growth period of individual maize plants and regulating crop senescence would be the first priority. In this study, we examined the regulatory effects of GA4+7 under two application methods: shanks and silks were moistened by cotton full with GA4+7 solution at concentrations of 0, 10, 60, and 120 mg L−1. The results showed that GA4+7 improved the grain-filling rate by increasing the content of auxin, gibberellin, zeatin, and abscisic acid in grains compared to control plants. In addition, the auxin, gibberellin, and zeatin contents in the grains were positively and significantly correlated with the maximum grain weight and the maximum and mean grain-filling rates. Moreover, GA4+7 increased the activities of superoxide dismutases, catalases, and peroxidases and reduced the malondialdehyde content in leaves compared with untreated plants. At the concentration of 60 mg L−1, GA4+7 showed the greatest effect on shank and silk applications (Sh-60 and Si-60) followed by 10 mg L−1 (Sh-10) for shank treatment and 120 mg L−1 (Si-120) for silk treatment. Our results suggest that a concentration of 60 mg L−1 GA4+7 for shank and silk application may be efficiently used for changing the level of hormones in grains and antioxidant enzymes in ear leaves, which may be useful for enhancing grain-filling rate and delaying leaf senescence, resulting in an increase in maize grain yield.
Arsenic Uptake by Two Tolerant Grass Species: Holcus lanatus and Agrostis capillaris Growing in Soils Contaminated by Historical Mining
Authors: Dradrach Agnieszka , Karczewska Anna , Szopka Katarzyna
Published: August 2020

The study focused on two grass species Holcus lanatus and Agrostis capillaris abundant in the sites of former As mining and processing in the Sudetes. Arsenic uptake from soils was examined to assess a risk associated with its accumulation in grass shoots and to check its dependence on soil fertilization. The research involved a field study and greenhouse experiment. In the field study, soil and plant samples were collected from 33 sites with 72–98,400 mg/kg total soil As. Arsenic uptake by grasses differed widely. Both species indicated a strategy typical for eliminators, although As concentrations in more than 50% of the shoot samples exceeded 4 mg/kg, a maximum permissible value for fodder. In the greenhouse experiment, commercial cultivars of both species were grown in five soils containing 394–19,600 mg/kg, untreated and fertilized. All seedlings died in the soil with highest total As, and considerable phytotoxicity was observed in other soils, particularly in nonfertilized ones. Fertilization resulted in the improvement of plant growth and reduction of As uptake except for Agrostis capillaris fertilized with manure. Further research should focus on identifying tolerant genotypes growing in extremely enriched sites and analysis of factors that will efficiently reduce As phytoaccumulation.
Effect of Ultrasonic and Microwave Dual-Treatment on the Physicochemical Properties of Chestnut Starch
Authors: Wang Meng , Wu Yanwen , Liu Yongguo , Ouyang Jie
Published: August 2020

This work examined the effect of ultrasound and microwave treatments, separate and in combination, on the physicochemical and functional properties of chestnut starch. The results revealed that the ultrasonic-microwave (UM) and microwave-ultrasonic (MU) dually modified samples exhibited more severe surface damage, weaker birefringence, and lower relative crystallinity and gelatinization enthalpy than the native and single-treated starches. The UM samples showed the highest oil absorption capacity, and the MU samples showed the highest water absorption capacity and the best freeze-thaw stability (five cycles) among all samples. The swelling power, peak, trough, final, and breakdown viscosities, and pasting temperature all decreased regardless of single or dual modification. This study provides a reference for potential industrial applications of ultrasound and microwave treatments for the modification of chestnut starch.
Tribo-Mechanical Characterization of Carbon Fiber-Reinforced Cyanate Ester Resins Modified With Fillers
Authors: Bajpai Ankur , Saxena Prateek , Kunze Klaus
Published: August 2020

High-performance polymer composites are being increasingly favored for structural applications. For this purpose, efforts are being focused on exploring the potential of high-performance thermoplastics and thermosets. Cyanate ester (CE) resin is a special thermoset that can be used at up to 400 °C without any considerable degradation; however, its tribological properties are not at the adequate level. Hence, it is needed to use this polymer in composite form with the fibrous/particulate reinforcement to impart better tribological properties and mechanical strength via a strong fiber–matrix interface. Carbon fiber/fabrics are at the forefront as reinforcement for specialty polymers. The tribological and tensile properties of cyanate ester (CE) composites-filled graphite, polytetrafluoroethylene (PTFE), and MoS2 micron-sized fillers reinforced with carbon fibers (CF) are investigated experimentally in a block-on-ring setup at 100 N, for 10 h, and with a sliding distance of approximately 10,000 m, against a hardened polished 100Cr6 steel shaft and diamond-like-coated (DLC) 100Cr6 steel shaft. The tribological properties of the composites including the coefficient of friction and specific wear rate are enhanced especially with the incorporation of graphite fillers. The friction coefficient and wear rate of the graphite-based composite was decreased significantly at 5 wt.% of graphite concentration. Further, at the same concentration, the graphite-based composite showed superior tensile properties as compared to the reference system owing to better dispersion and adhesion between the fibers and matrix. Tensile tests are performed to characterize the fiber–matrix interfacial adhesion and other strength properties.
Application of Zinc Oxide to Obtain and Modify Properties of Adipate Plasticizer of Polyvinyl Chloride
Authors: Mazitova Aliya K. , Vikhareva Irina N. , Aminova Guliya K , Savicheva Juliya N.
Published: August 2020

Heterogeneous catalysts are widely used in basic research and in the petrochemical industry due to their effectiveness. In modern times, interest in this type of catalyst and, in particular, in mineral oxides is associated with the technological design of the process, namely: The absence of waste emissions, and the possibility of regeneration and reuse of the catalyst, which meets the criteria of green chemistry. For this reason, the preparation of non-toxic adipate plasticizers is expediently carried out under conditions of heterogeneous catalysis. Zinc oxide was chosen for this purpose, and as initial reagents: Adipic acid, butoxyethanol, and phenoxyethanol. For synthesized butoxyethylphenoxyethyl adipate by thermogravimetry on a TGA-DSC-combined thermal analysis instrument and differential scanning calorimetry on a DSC-1 instrument («Mettler Toledo»), the following properties were studied: Thermal stability, melting and crystallization temperatures, polymer compatibility. An analysis of the data in comparison with di-2-ethylhexylphthalate confirmed the possibility of using it as a plasticizing additive in PVC compositions. The zinc compound obtained in situ as part of the developed plasticizing composition contributes to increasing the color and thermal stability of the obtained PVC compositions.
Poly(Glycerol Succinate) as an Eco-Friendly Component of PLLA and PLCL Fibres towards Medical Applications
Authors: Kolbuk Dorota , Jeznach Oliwia , Wrzecionek Michał , Gadomska-Gajadhur Agnieszka
Published: August 2020

This study was conducted as a first step in obtaining eco-friendly fibres for medical applications using a synthesised oligomer poly(glycerol succinate) (PGSu) as an additive for synthetic poly(L-lactic acid) (PLLA) and poly (L-lactide-co-caprolactone) (PLCL). The effects of the oligomer on the structure formation, morphology, crystallisation behaviour, and mechanical properties of electrospun bicomponent fibres were investigated. Nonwovens were investigated by means of scanning electron microscopy (SEM), wide angle X-ray scattering (WAXS), differential scanning calorimetry (DSC), and mechanical testing. The molecular structure of PLLA fibres is influenced by the presence of PGSu mainly acting as an enhancer of molecular orientation. In the case of semicrystalline PLCL, chain mobility was enhanced by the presence of PGSu molecules, and the crystallinity of bicomponent fibres increased in relation to that of pure PLCL. The mechanical properties of bicomponent fibres were influenced by the level of PGSu present and the extent of crystal formation of the main component. An in vitro study conducted using L929 cells confirmed the biocompatible character of all bicomponent fibres.
A Novel Geometric Error Compensation Method for Gantry-Moving CNC Machine Regarding Dominant Errors
Authors: Lu Hong , Cheng Qian , Zhang Xinbao , Liu Qi , Qiao Yu , Zhang Yongquan
Published: August 2020

Gantry-type computer numerical control (CNC) machines are widely used in the manufacturing industry. A novel structure with moveable gantry is proposed to improve the traditional gantry-type machine structure’s disadvantage of taking up too much space. Geometric errors have direct impacts on the actual position of the tool, which significantly reduces the accuracy of machines. Errors of different components are always coupled and have uncertain effects on the total geometric error. Thus, it is essential to find an effective way to identify the dominant errors and do targeted compensation. First, a novel identification method using value leaded global sensitivity analysis (VLGSA) is proposed to find the dominant errors. In VLGSA, weighting factors which show the influence of the error range are used to modify the multi-body system (MBS) error model. Results show that the dominant errors in three directions respectively contribute 80%, 86% and 85% of the total error in their directions. Then, errors identified by VLGSA are modeled by least-square linear fitting and B-spline interpolation methods, respectively, according to the feature of error data. Finally, the models are applied in a new real-time compensation system developed on the Beckhoff TwinCAT servo system. Experimental results from the gantry-type CNC engraving and milling machine show the proposed method can help figure out the most dominant errors and reduce around 90% of the total error.
Enhancing the Performance of HPAM Polymer Flooding Using Nano CuO/Nanoclay Blend
Authors: Kumar Saket , Tiwari Roshan , Husein Maen , Kumar Nitesh , Yadav Upendra
Published: August 2020

A single polymer flooding is a widely employed enhanced oil recovery method, despite polymer vulnerability to shear and thermal degradation. Nanohybrids, on the other hand, resist degradation and maintain superior rheological properties at different shear rates. In this article, the effect of coupling CuO nanoparticles (NPs) and nanoclay with partially hydrolyzed polyacrylamide (HPAM) polymer solution on the rheological properties and the recovery factor of the nanohybrid fluid was assessed. The results confirmed that the NP agents preserved the polymer chains from degradation under mechanical, chemical (i.e., salinity), and thermal stresses and maintained good extent of entanglement among the polymer chains, leading to a strong viscoelastic attribute, in addition to the pseudoplastic behavior. The NP additives increased the viscosity of the HPAM polymer at shear rates varying from 10–100 s−1. The rheological properties of the nanohybrid systems varied with the NP additive content, which in turn provided a window for engineering a nanohybrid system with a proper mobility ratio and scaling coefficient, while avoiding injectivity issues. Sandpack flooding tests confirmed the superior performance of the optimized nanohybrid system and showed a 39% improvement in the recovery ratio relative to the HPAM polymer injection.