bluuebunny/crossref_metadata_2025 huggingface dataset:
Comprehensive bioinformatics analysis to identify a novel cuproptosis-related prognostic signature and its ceRNA regulatory axis and candidate traditional Chinese medicine active ingredients in lung adenocarcinoma
Authors: Wang Shaohui , Xing Nan , Meng Xianli , Xiang Li , Zhang Yi
Published: August 2022

Lung adenocarcinoma (LUAD) is the most ordinary histological subtype of lung cancer, and regulatory cell death is an attractive target for cancer therapy. Recent reports suggested that cuproptosis is a novel copper-dependent modulated form of cell death dependent on mitochondrial respiration. However, the role of cuproptosis-related genes (CRGs) in the LUAD process is unclear. In the current study, we found that DLD, LIAS, PDHB, DLAT and LIPA1 in 10 differentially expressed CRGs were central genes. GO and KEGG enrichment results showed that these 10 CRGs were mainly enriched in acetyl-CoA biosynthetic process, mitochondrial matrix, citrate cycle (TCA cycle) and pyruvate metabolism. Furthermore, we constructed a prognostic gene signature model based on the six prognostic CRGs, which demonstrated good predictive potential. Excitedly, we found that these six prognostic CRGs were significantly associated with most immune cell types, with DLD being the most significant (19 types). Significant correlations were noted between some prognostic CRGs and tumor mutation burden and microsatellite instability. Clinical correlation analysis showed that DLD was related to the pathological stage, T stage, and M stage of patients with LUAD. Lastly, we constructed the lncRNA UCA1/miR-1-3p/DLD axis that may play a key role in the progression of LUAD and screened nine active components of traditional Chinese medicine (TCM) that may regulate DLD. Further, in vitro cell experiments and molecular docking were used to verify this. In conclusion, we analyzed the potential value of CRGs in the progression of LUAD, constructed the potential regulatory axis of ceRNA, and obtained the targeted regulatory TCM active ingredients through comprehensive bioinformatics combined with experimental validation strategies. This work not only provides new insights into the treatment of LUAD but also includes a basis for the development of new immunotherapy drugs that target cuproptosis.
Global trends in research on miRNA–microbiome interaction from 2011 to 2021: A bibliometric analysis
Authors: Yan Xiang-Yun , Yao Jun-Peng , Li Yan-Qiu , Zhang Wei , Xi Meng-Han , Chen Min , Li Ying
Published: August 2022

An increasing number of research suggests that the microRNA (miRNA)–microbiome interaction plays an essential role in host health and diseases. This bibliometric analysis aimed to identify the status of global scientific output, research hotspots, and frontiers regarding the study of miRNA–microbiome interaction over the past decade. We retrieved miRNA–microbiome-related studies published from 2011 to 2021 from the Web of Science Core Collection database; the R package bibliometrix was used to analyze bibliometric indicators, and VOSviewer was used to visualize the field status, hotspots, and research trends of miRNA–microbiome interplay. In total, 590 articles and reviews were collected. A visual analysis of the results showed that significant increase in the number of publications over time. China produced the most papers, and the United States contributed the highest number of citations. Shanghai Jiaotong University and the University of California Davis were the most active institutions in the field. Most publications were published in the areas of biochemistry and molecular biology. Yu Aiming was the most prolific writer, as indicated by the h-index and m-index, and Liu Shirong was the most commonly co-cited author. A paper published in the International Journal of Molecular Sciences in 2017 had the highest number of citations. The keywords “expression” and “gut microbiota” appeared most frequently, and the top three groups of diseases that appeared among keywords were cancer (colorectal, et al.), inflammatory bowel disease (Crohn’s disease and ulcerative colitis), and neurological disorders (anxiety, Parkinson’s disease, et al.). This bibliometric study revealed that most studies have focused on miRNAs (e.g., miR-21, miR-155, and miR-146a), gut microbes (e.g., Escherichia coli, Bifidobacterium, and Fusobacterium nucleatum), and gut bacteria metabolites (e.g., butyric acid), which have the potential to improve the diagnosis, treatment, and prognosis of diseases. We found that therapeutic strategies targeting the miRNA–microbiome axis focus on miRNA drugs produced in vitro; however, some studies suggest that in vivo fermentation can greatly increase the stability and reduce the degradation of miRNA. Therefore, this method is worthy of further research.
Targeting pulmonary vascular endothelial cells for the treatment of respiratory diseases
Authors: Li Yi-Xuan , Wang Hong-Bo , Li Jing , Jin Jian-Bo , Hu Jing-Bo , Yang Chun-Lin
Published: August 2022

Pulmonary vascular endothelial cells (VECs) are the main damaged cells in the pathogenesis of various respiratory diseases and they mediate the development and regulation of the diseases. Effective intervention targeting pulmonary VECs is of great significance for the treatment of respiratory diseases. A variety of cell markers are expressed on the surface of VECs, some of which can be specifically combined with the drugs or carriers modified by corresponding ligands such as ICAM-1, PECAM-1, and P-selectin, to achieve effective delivery of drugs in lung tissues. In addition, the great endothelial surface area of the pulmonary vessels, the “first pass effect” of venous blood in lung tissues, and the high volume and relatively slow blood perfusion rate of pulmonary capillaries further promote the drug distribution in lung tissues. This review summarizes the representative markers at the onset of respiratory diseases, drug delivery systems designed to target these markers and their therapeutic effects.
Effect of social media rumors on stock market volatility: A case of data mining in China
Authors: Zhang Hua , Chen Yuanzhu , Rong Wei , Wang Jun , Tan Jinghua
Published: August 2022

The Stock Market is a typical complex network composed of investors, stocks, and market information. The abnormal fluctuation of the Stock Market has a strong effect on the economy of a country and even that of the world. Fueled by the herd effect of the increasingly abundant social media, Internet rumors, as an important source of market information and an exogenous financial risk, can lead to the collapse of investor confidence and the further propagation of financial risks, which can damage the financial system and even lead to social unrest. With additional availability of computing techniques, we attempt to uncover the media information effects in the stock market and seek to provide researchers with 1) a theoretical reference for a comprehensive understanding of such a complex network, 2) accurate prediction of future data, and 3) design of efficient and reliable risk intervention models. Based on the data of China’s Stock Market, this study uses machine learning to investigate social media rumors to reveal the interplay of social media rumors and stock market volatility. In this work, we find patterns from social media rumors from financial forums using machine learning, quantify social media rumors based on statistics, and analyze the mechanism of propagation and influence of social media rumors on stock market volatility using econometric models. The empirical results show that rumors play an important information transmission effect on stock market volatility and the constructed Internet Financial Forum Rumor Index is helpful to sense the potential impact of rumors, i.e., a significant lagged negative effect. These findings are of guidance for the optimization of the information environment, and can serve to promote the healthy and stable development of the stock market.
Long-term improvement by ozone treatment in chronic pain secondary to chemotherapy-induced peripheral neuropathy: A preliminary report
Authors: Clavo Bernardino , Rodríguez-Abreu Delvys , Galván Saray , Federico Mario , Martínez-Sánchez Gregorio , Ramallo-Fariña Yolanda , Antonelli Carla , Benítez Gretel , Rey-Baltar Dolores , Jorge Ignacio J , Rodríguez-Esparragón Francisco , Serrano-Aguilar Pedro
Published: August 2022

Background: Pain secondary to chemotherapy-induced peripheral neuropathy (CIPN) can limit the administration of chemotherapy, cancer-treatment outcomes, and the quality of life of patients. Oxidative stress and inflammation are some of the key mechanisms involved in CIPN. Successful treatments for CIPN are limited. This report shows our preliminary experience using ozone treatment as a modulator of oxidative stress in chronic pain secondary to CIPN.

Methods: Ozone treatment, by rectal insufflation, was administered in seven patients suffering from pain secondary to grade II or III CIPN. Pain was assessed by the visual analog scale (VAS).

Results: All patients, except one, showed clinically relevant pain improvement. Median pain score according to the VAS was 7 (range: 5–8) before ozone treatment, 4 (range: 2–6) at the end of ozone treatment (p = 0.004), 5.5 (range: 1.8–6.3) 3 months after the end of ozone treatment (p = 0.008), and 6 (range: 2.6–6.6) 6 months after the end of ozone treatment (p = 0.008). The toxicity grade, according to the Common Terminology Criteria for Adverse Events (CTCAE v.5.0), improved in half of the patients.

Conclusion: This report shows that most patients obtained clinically relevant and long-lasting improvement in chronic pain secondary to CIPN after treatment with ozone. These observed effects merit further research and support our ongoing randomized clinical trial (NCT04299893).
A preliminary attempt to investigate mirror self-recognition in Octopus vulgaris
Authors: Amodio Piero , Fiorito Graziano
Published: August 2022

Mirror self-recognition (MSR) is a potential indicator of self-awareness. This capability has been widely investigated among vertebrates, yet it remains largely unstudied in invertebrates. Here we report preliminary data about behavioural responses exhibited by common octopuses (Octopus vulgaris) toward reflected images of themselves and explore a procedure for marking octopus’ skin in order to conduct the Mark test. Octopuses (n = 8) received four familiarization trials with a mirror and four familiarization trials with a control stimulus: a non-reflective panel (Panel group, n = 4) or the sight of a conspecific housed in an adjacent tank (Social group, n = 4). Subsequently, octopuses were marked with non-toxic nail polish in the area where the Frontal White Spots are usually expressed, and they received one test trial with the mirror and one control trial with no mirror. We found that octopuses in the Panel group tended to exhibit a stronger exploratory response toward the mirror than the non-reflective panel, but performed agonistic responses only in the presence of the mirror. In contrast, octopuses in the Social group exhibited comparable exploratory and agonistic behaviours toward the mirror and the sight of the conspecific. In the Mark test, octopuses frequently explored the mark via their arms. However, mark-directed behaviours were also observed in the absence of the mirror and in sham-marked individuals, thus suggesting that proprioceptive stimuli drove these responses. Despite the limitations associated with our marking procedure, the baseline data collected in this pilot study may facilitate the further testing of MSR in the octopus and other cephalopods.
How synergy between mechanistic and statistical models is impacting research in atrial fibrillation
Authors: Bai Jieyun , Lu Yaosheng , Wang Huijin , Zhao Jichao
Published: August 2022

Atrial fibrillation (AF) with multiple complications, high morbidity and mortality, and low cure rates, has become a global public health problem. Although significant progress has been made in the treatment methods represented by anti-AF drugs and radiofrequency ablation, the therapeutic effect is not as good as expected. The reason is mainly because of our lack of understanding of AF mechanisms. This field has benefited from mechanistic and (or) statistical methodologies. Recent renewed interest in digital twin techniques by synergizing between mechanistic and statistical models has opened new frontiers in AF analysis. In the review, we briefly present findings that gave rise to the AF pathophysiology and current therapeutic modalities. We then summarize the achievements of digital twin technologies in three aspects: understanding AF mechanisms, screening anti-AF drugs and optimizing ablation strategies. Finally, we discuss the challenges that hinder the clinical application of the digital twin heart. With the rapid progress in data reuse and sharing, we expect their application to realize the transition from AF description to response prediction.
Nitric oxide–an antidote to seed aging modifies meta-tyrosine content and expression of aging-linked genes in apple embryos
Authors: Ciacka Katarzyna , Tyminski Marcin , Wal Agnieszka , Gniazdowska Agnieszka , Krasuska Urszula
Published: August 2022

Short-term (3 h) treatment of embryos isolated from accelerated aged apple seeds (Malus domestica Borkh.) with nitric oxide (NO) partially reduced the effects of aging. The study aimed to investigate the impact of the short-term NO treatment of embryos isolated from apple seeds subjected to accelerated aging on the expression of genes potentially linked to the regulation of seed aging. Apple seeds were artificially aged for 7, 14, or 21 days. Then, the embryos were isolated from the seeds, treated with NO, and cultured for 48 h. Progression of seed aging was associated with the decreased transcript levels of most of the analyzed genes (Lea1, Lea2a, Lea4, Hsp70b, Hsp20a, Hsp20b, ClpB1, ClpB4, Cpn60a, Cpn60b, Raptor, and Saur). The role of NO in the mitigation of seed aging depended on the duration of the aging. After 7 and 14 days of seed aging, a decreased expression of genes potentially associated with the promotion of aging (Tor, Raptor, Saur) was noted. NO-dependent regulation of seed aging was associated with the stimulation of the expression of genes encoding chaperones and proteins involved in the repair of damaged proteins. After NO application, the greatest upregulation of ClpB, Pimt was noted in the embryos isolated from seeds subjected to 7-day long accelerated aging, Hsp70b, Hsp70c, and Cpn in the embryos of seeds aged for 14 days, and Lea2a in the embryos of seeds after 21 days of aging. We also demonstrated the increased meta-tyrosine concentration depending or in respect the progression of artificial aging, and the NO-induced increased phenylalanine content in seeds artificially aged for 21 days. In the NO-treated embryos of seeds aged for 7 and 21 days, the level of tyrosine was almost doubled compared to the aged tissue. Our data confirmed the usage of meta-tyrosine as a marker of seed aging and indicated that the increased meta-tyrosine/tyrosine ratio could be related to the loss of seed viability.
Profiling of transcriptional regulators associated with starch biosynthesis in sorghum (Sorghum bicolor L.)
Authors: Xiao Qianlin , Huang Tianhui , Cao Wan , Ma Kuang , Liu Tingting , Xing Fangyu , Ma Qiannan , Duan Hong , Ling Min , Ni Xianlin , Liu Zhizhai
Published: August 2022

Starch presents as the major component of grain endosperm of sorghum (Sorghum bicolor L.) and other cereals, serving as the main energy supplier for both plants and animals, as well as important industrial raw materials of human beings, and was intensively concerned world widely. However, few documents focused on the pathway and transcriptional regulations of starch biosynthesis in sorghum. Here we presented the RNA-sequencing profiles of 20 sorghum tissues at different developmental stages to dissect key genes associated with sorghum starch biosynthesis and potential transcriptional regulations. A total of 1,708 highly expressed genes were detected, namely, 416 in grains, 736 in inflorescence, 73 in the stalk, 215 in the root, and 268 genes in the leaf. Besides, 27 genes encoded key enzymes associated with starch biosynthesis in sorghum were identified, namely, six for ADP-glucose pyrophosphorylase (AGPase), 10 for starch synthases (SSs), four for both starch-branching enzymes (SBE) and starch-debranching enzymes (DBEs), two for starch phosphorylases (SPs), and one for Brittle-1 (BT1). In addition, 65 transcription factors (TFs) that are highly expressed in endosperm were detected to co-express with 16 out of 27 genes, and 90 cis-elements were possessed by all 27 identified genes. Four NAC TFs were cloned, and the further assay results showed that three of them could in vitro bind to the CACGCAA motif within the promoters of SbBt1 and SbGBSSI, two key genes associated with starch biosynthesis in sorghum, functioning in similar ways that reported in other cereals. These results confirmed that sorghum starch biosynthesis might share the same or similar transcriptional regulations documented in other cereals, and provided informative references for further regulatory mechanism dissection of TFs involved in starch biosynthesis in sorghum.
The association between parent-child relationship and problematic internet use among English- and Chinese-language studies: A meta-analysis
Authors: Zhu Yalin , Deng Linyuan , Wan Kun
Published: August 2022

As past studies of the association between parent-child relationship and problematic internet use show mixed results and are influenced by many factors, this meta-analysis of 75 primary Chinese and English language studies from 1990 to 2021 with 110,601 participants (aged 6−25 years) explored (a) the overall association between parent-child relationship and problematic internet use, and (b) whether the association is affected by their types, country, measures, objects of the parent-child relationship, gender, age, year and publication types. We used funnel plots, Classic fail-safe N and Egger's test to test for publication bias and for moderation with the homogeneity tests. The results showed a negative association between quality of parent-child relationship and problematic internet use (r = −0.18, 95% CI = [−0.20, −0.15]). The moderation analysis found that compared with internet addiction tendency, the association between social media addiction and parent-child relationship was stronger. Moreover, the association between the parent-child relationship and problematic internet use of emerging adults (18–25 years old) was stronger than that of adolescents (12−18 years old). Furthermore, the negative association between parent-child relationship and problematic internet use was weaker (a) in Italy than those in Turkey and China, (b) when using CPS (Closeness to Parents Scale), IPPA (Inventory of Parent and Peer Attachment), or PARQ (Parent-Child Relationship Questionnaire) measuring parent-child relationship than using PCCS (Parent-Child Communication Scale), (c) when using IAT measuring problematic internet use rather than using IGDS or APIUS. Hence, these results indicate a negative association between parent-child relationships and problematic internet use, and the association is moderated by types of problematic internet use, age, country, scales of both parent-child relationship and problematic internet use.
Embedded self-conceptualization and social learning in online social networking platforms
Authors: Yu Yan
Published: August 2022

Online social networking (OSN) has deeply penetrated university campuses, influencing multiple aspects of student life. Standing from a pedagogical perspective, this study investigates how university students’ OSN engagement affect their learning outcomes. Drawn upon social learning theory, this study proposes that OSN engagement help university students’ establishing the self-efficacy belief, achieving social acceptance and acculturation with environment, and these attributions further lead them to attain positive learning outcomes which are shaped by self-esteem development, satisfaction with university life, and the grade point average (GPA) based performance. Results from a survey accompanied by focus group discussions support these embedded self-conceptualization and social learning in OSN. This study contributes to the extant research on OSN for learning by highlighting the role of OSN for the whole person development, especially the students’ self-conceptulization and psychological well-beings. The revealed mediating mechanisms also adds values to social learning theory and imply the design foci of e-learning activities and applications.
A WeChat-based self-compassion training to improve the treatment adherence of patients with schizophrenia in China: Protocol for a randomized controlled trial
Authors: Dong Die , Mu Ting-Yu , Xu Jia-Yi , Dai Jia-Ning , Zhou Zhi-Nan , Zhang Qiong-Zhi , Shen Cui-Zhen
Published: August 2022

Background

At present, adherence to antipsychotic treatment is often poor, leading to the recurrence of symptoms. This increases the likelihood of the patient experiencing disability and thus increases the disease burden for the patient, their family, and society as a whole. However, to date, there is no clear evidence regarding the effect of medication adherence interventions on outcomes for patients with schizophrenia. Moreover, the traditional intervention methods are limited by manpower and resources in low- and middle-income countries. Recent studies have demonstrated that increasing a patient’s level of self-compassion may improve their treatment adherence. Online mental health care interventions have advantages in terms of feasibility and acceptability for patients with schizophrenia. In this regard, a WeChat-based self-compassion training protocol to improve patient treatment adherence was designed in this study and will be evaluated in the future to determine its impact on patients with schizophrenia.

Methods

The protocol for the randomized controlled trial (RCT) is based on the SPIRIT 2013 statement. This parallel RCT will aim to recruit 392 patients with schizophrenia who will be randomized at a 1:1 ratio into a 3-week intervention or control group. Both groups will receive routine care. The intervention group will also receive WeChat-based self-compassion training, which requires participants to complete three tasks every day, including a reading task, a meditation task, and a self-compassion journal task. The control group will receive WeChat-based psychological health education, which will only require participants to read positive articles about psychological health every day. Medication adherence, self-compassion, stigma, and social support will be measured at baseline (T0), immediately after the intervention (T1), and 3 weeks after the intervention (T2). Program feasibility will be evaluated throughout the course of the study, and acceptability will be measured immediately after the intervention (T1).

Expected results:

The intervention described here will address the barriers to accessing mental health care for people with schizophrenia, including patients’ desire for independent management, difficulty accessing providers, and concerns about privacy and stigma. The current study provides guidance for clinical nurses to carry out psychological intervention, with the ultimate aim of addressing the problems associated with a shortage of psychological professionals in low- and middle-income countries.
Analysis of sleep problem in children aged 1–3 years with autism spectrum disorder in Zhejiang province, China
Authors: Yao Dan , Wang Shasha , Li Fangfang , Gao Minjie , Shao Jie
Published: August 2022

Background

High prevalence of sleep problems have been founded in children with Autism Spectrum Disorder (ASD), with rates ranging from 50 to 80%. We aimed to study the sleep status and the occurrence of sleep problems in children with autism spectrum disorder (ASD) aged 1–3 years, and to provide reference for guiding early comprehensive intervention for ASD children from the perspective of sleep.

Methods

From January 1 to December 31, 2021, 74 ASD children who met the diagnostic criteria of “Diagnostic and Statistical Manual of Mental Disorders-5 (DSM-V)” served as case group while 84 typically-developing children of the same sex and age served as control group. An original Children's Sleep Habit Questionnaire was adopted to compare the sleep status of children in the two groups and to conduct statistical analysis on related factors.

Results

The incidence of sleep problems in the case group (78.4%) was significantly higher than that in the control group (34.5%) (P < 0.001). Compared with the children in the control group, children in the case group had later bedtime (P < 0.05) and less sleep duration (P < 0.05), and required longer time to fall asleep (P < 0.001) The incidence of sleep problems in children who could fall asleep autonomously in the case group was significantly lower than that in children who needed parental help (P < 0.05). In the case group, the longer the screen exposure time, the higher the incidence of sleep problems (P < 0.05).

Conclusions

The incidence of sleep problems in ASD children aged 1–3 years is also high, mainly manifested in late bedtime, difficulty falling asleep, frequent night awakenings and less sleep duration. Both sleep patterns and screen exposure can impact their sleep. In the early comprehensive intervention of ASD children, it is necessary to pay full heed to their sleep status and take timely intervention measures in order to improve the quality of life for the ASD children and their families.
Treatment providers' perspectives on a gender-responsive approach in alcohol and drug treatment for women in Belgium
Authors: Schamp Julie , Vanderplasschen Wouter , Meulewaeter Florien
Published: August 2022

Background

Gender inequity is a pervasive challenge to health equity on a global scale, and research shows the impact of sex and gender on substance use regarding for example epidemiology, treatment needs, treatment admission and treatment outcomes. The gender-transformative approach to action and health indicates that health interventions may maintain, exacerbate or reduce gender-related health inequalities, depending on the degree and quality of gender-responsiveness within the programme or policy. However, research shows a lack of gender-responsive initiatives in the alcohol and drug addiction field.

Aims

The purpose of this study is to explore in depth how alcohol and drug treatment can be made more sensitive to female users' treatment needs from the perspective of service providers. Consequently, study findings can inform the development of gender-responsive treatment options and aid to a deeper understanding of how these trends are designated on the continuum of approaches to action and health in the alcohol and drug field.

Methods

Four focus groups were organized across different regions in Belgium with a total of 43 participants, including service providers, policy makers and women who use(d) drugs.

Results

The perspective of the participants on substance use prevention and treatment for female users incorporates some crucial gender-specific and gender-transformative features. Next to implementing mother-child options, a holistic approach, experts by experience and empowering women in treatment, professionals report the relevance of awareness raising campaigns targeting all levels and sectors in society. Also, recurring attention was given to the role of men in the narratives of female users.

Conclusion

Study findings show that the field of alcohol and drug prevention and treatment is being looked at through the lens of gender-responsiveness. However, to achieve improvement in the lives of both women and men, and hence creating more equal chances and opportunities in substance abuse treatment, the gender-transformative approach in addiction care needs to be further explored, criticized and established in practice and future research.
COVID-19 related innovation in Aotearoa/New Zealand mental health helplines and telehealth providers – mapping solutions and discussing sustainability from the perspective of service providers
Authors: Pavlova Alina , Scarth Bonnie , Witt Katrina , Hetrick Sarah , Fortune Sarah
Published: August 2022

Background

The coronavirus disease 2019 (COVID-19) pandemic and associated interventions resulted in changes in both the demand and supply of mental health services and necessitated agile adaptation and innovation from service providers.

Aims

The aim of this study was to explore what innovative solutions were adopted in response to COVID-19 and the pandemic control measures, what opportunities and challenges were associated with these innovations, as well as to critically reflect on the longer-term sustainability of the innovations in the context of Aotearoa/New Zealand mental healthcare.

Materials and methods

We used thematic analysis to analyse the data from the 23 in-depth interviews with helpline employees and general practitioners from 18 service providers that regularly engage in mental healthcare.

Results

Two key themes related to COVID-19 and the pandemic control measures were identified from respondents’ accounts. These were “Technological innovations” and “Process innovations” where providers noted types of innovative solutions, and opportunities and challenges associated with those. The themes culminated in a meta theme “Sustainability of changes to service delivery” that appeared consistently in each theme and asks to consider how sustainable these innovative solutions might be in the long-term. Namely, sustainability of innovation was questioned in respect to the (a) innovative solutions being the emergency solutions with little or no impact analysis, (b) “returning back to normal” due to limited future funding and innovation as a sunk cost, and (c) sporadic and inconsistent innovation between service providers that does not contribute to quality and continuity of care from the systems perspective.

Conclusion

COVID-19 and the measures of pandemic control were associated with an increase in innovative solutions from service providers. There were both opportunities and challenges associated with these innovative efforts and the sustainability of innovation was questioned. Future research about COVID-19 related innovation of service provision should focus on service user experiences and empirically measure the innovation safety and efficacy.
Statistical investigation on equatorial pitch angle distribution of energetic electrons in Earth’s outer radiation belt during CME- and CIR-driven storms
Authors: Chakraborty S. , Chakrabarty D. , Reeves G. D. , Baker D. N. , Rae I. J.
Published: August 2022

We present a statistical investigation (September 2012 - September 2017) of pitch angle distribution (PAD) of energetic electrons (∼30 keV - 1 MeV) in the outer radiation belt (L ≥ 3) during CME- and CIR-driven geomagnetic storms using Van Allen Probe measurements. We selected geomagnetic storms based on minimum of SYM-H being less than -50 nT and classified the storms according to their drivers. Thus, we obtained 23 CME- and 24 CIR-driven storms. During the storm intervals, pitch angle resolved electron flux measurements are obtained from the MagEIS instrument on-board Van Allen Probe-A spacecraft. We assume symmetric pitch angle distributions around 90° pitch angle and fit the observed PADs with Legendre polynomials after propagating them to the magnetic equator. Legendre coefficients c2 and c4, and the ratio R = |c2/c4| are used to categorize the different PAD types. To resolve the spatio-temporal distribution of PADs, these coefficients are binned in 5 L-shell bins, 12 MLT bins for seven energy channels and four storm phases. We found that several hundreds of keV electrons exhibit clear dependence on local time, storm phases and storm drivers, with increased anisotropy for CME-driven storms during main and early recovery phases. On the contrary, we found that tens of keV electrons do not exhibit significant dependence on these parameters. We have discussed the different physical mechanisms responsible for the observed MLT dependent PADs and found drift-shell splitting to be the major contributor.
Development and validation of a competing risk model for second primary pancreatic ductal adenocarcinoma: A population-based study
Authors: Song Lishan , Xu Chaojie , Zhang Tong , Chen Shengyang , Shi Zhigang , Hu Shuiquan , Cheng Bingbing , Tong Hao , Wei Guangkun , Li Xiaoyong
Published: August 2022

Background

With advances in early diagnosis and treatment, the number of cancer survivors continues to grow, and more and more cancer survivors face the threat of second primary cancer (SPM). Second primary pancreatic ductal adenocarcinoma (spPDAC) is an important subclass of SPM, but its prognostic characteristics are poorly understood.

Methods

A total of 5,439 spPDAC samples and 67,262 primary pancreatic ductal adenocarcinoma (pPDAC) samples were extracted from the SEER database for this study. Survival differences between spPDAC and pPDAC samples were compared using Kaplan–Meier curves and log-rank tests. The Fine and Gray proportional subdistributed hazard method was used to analyze potential associations between clinical variables and pancreatic ductal adenocarcinoma-specific death (PDACSD) and death from other causes. After that, the clinical variables significantly related to PDACSD were screened out to construct a competing risk nomogram, which was used to evaluate the probability of the occurrence of PDACSD. The C-index was used to evaluate the discriminative ability of the model. The area under the curve (AUC) was used to verify the discrimination of the model. The calibration curve was used to verify the calibration of the model. Decision curve analysis (DCA) was used to validate the clinical utility of the model.

Results

Compared with patients with spPDAC, the pPDAC sample had a better prognosis (p = 0.0017). Across all spPDAC samples, the three most common sites of first-present cancer were the prostate, breast, and digestive system. Age (p < 0.001), race (p = 0.006), interval (p = 0.016), location (p < 0.001), T stage (p = 0.003), M stage (p < 0.001), chemotherapy (p < 0.001), and radiotherapy (p = 0.006) were the clinical variables associated with PDACSD screened by multivariate competing risks analysis. The concordance index values for the training and validation sets were 0.665 (95% CI, 0.655, 0.675) and 0.666 (95% CI, 0.650, 0.682), respectively. AUC, calibration curve, and DCA indicated that the model we constructed had good discrimination, calibration, and clinical utility.

Conclusions

In conclusion, we first analyzed the impact of previous cancer history on prognosis. We then constructed a competing risk model that can predict the probability of developing PDACSD in spPDAC. This model has good discriminative ability, calibration, and clinical practicability and has certain guiding value for clinical decision-making.
A survey of dairy cattle farmers' management practices for cull cows in Ontario, Canada
Authors: Marshall Joanne , Haley Derek , Levison Lena , Kelton David F. , Miltenburg Cynthia , Roche Steven , Duffield Todd F.
Published: August 2022

Removal of cows from dairy cattle production is a routine and unavoidable practice of the dairy industry and is often referred to as culling. The objectives of this study were to use a survey to describe current on-farm cull cow management, farmers' perception of cull cows' journeys to slaughter, and the adoption of current recommendations and regulations by Ontario dairy farmers. All Ontario dairy farmers were invited to complete a cull cow management survey between December 2020 and March 2021 that included 44 questions covering farmer demographic information, farm characteristics, and cull cow management. The survey response rate was 7.4% (n = 248); a total of 226 of the responses were included in this study for analysis. Most respondents indicated they have a written standard operating procedure (SOP) for cull cows (62%), and 48, 13, and 15% of those identified they use their cull cow SOP “always,” “sometimes,” and “never,” respectively. The more confident respondents were that cull cows arrived at slaughter in the condition they left the farm the less likely they were to have a cull cow SOP [odds ratio (OR) 0.83]. The most important sources of information for the management of cull cows were the herd veterinarian (64%) and members of the marketing/regulatory organization the Dairy Farmers of Ontario (44%). Drug withdrawal time was the only factor most respondents (73%) considered “very important” for the assessment of cull cows prior to transport. Most farmers believe cull cows journey from the farm to slaughter is three or less days (55%), and the confidence of farmers that cull cows arrive at slaughter in the condition they left their farm was generally high. Lastly, most farmers (66%) identified they were familiar with recent regulatory changes around the fitness, duration of transport, and lactation status for cull cows. These results highlight farmers' perceptions of the impacts and durations of the journey of cull cows differs from reality, and there are misunderstandings of the requirements for cull cow management. Further research should investigate how different strategies for training farmers may lead to improved cull cow welfare and regulatory compliance.
Implicit A-Stable Peer Triplets for ODE Constrained Optimal Control Problems
Authors: Lang Jens , Schmitt Bernhard A.
Published: August 2022

This paper is concerned with the construction and convergence analysis of novel implicit Peer triplets of two-step nature with four stages for nonlinear ODE constrained optimal control problems. We combine the property of superconvergence of some standard Peer method for inner grid points with carefully designed starting and end methods to achieve order four for the state variables and order three for the adjoint variables in a first-discretize-then-optimize approach together with A-stability. The notion triplets emphasize that these three different Peer methods have to satisfy additional matching conditions. Four such Peer triplets of practical interest are constructed. In addition, as a benchmark method, the well-known backward differentiation formula BDF4, which is only A(73.35∘)-stable, is extended to a special Peer triplet to supply an adjoint consistent method of higher order and BDF type with equidistant nodes. Within the class of Peer triplets, we found a diagonally implicit A(84∘)-stable method with nodes symmetric in [0, 1] to a common center that performs equally well. Numerical tests with four well established optimal control problems confirm the theoretical findings also concerning A-stability.
An Automatic Identification Method of Crested Ibis (Nipponia nippon) Habitat Based on Spatiotemporal Density Detection
Authors: Jiang Xian , Yang Tingdong , Liu Dongping , Zheng Yili , Chen Yan , Li Fan
Published: August 2022

To address the current challenges of the heavy workload, time-consuming nature and labor-intensiveness involved in existing crested ibis’s (Nipponia nipponTemminck, 1835) habitat identification approaches, this paper proposes an automatic habitat identification method based on spatiotemporal density detection. With consideration of the characteristics of the crested ibis’s trajectory data, such as aggregation, repeatability, and uncertainty, this method achieves detecting the crested ibis’s stopping points by using the spatial characteristics of the trajectory data. On this basis, an improved spatiotemporal clustering-based DBSCAN method is proposed in this paper, incorporating temporal characteristics of the trajectory data. By combining the spatial and temporal features, the proposed method is able to accurately identify the roosting and foraging sites among the crested ibis’s stopping points. Supported by remote sensing images and field investigations, it was found that the method proposed in this paper has a good clustering effect and can effectively identify the crested ibis’s foraging sites and overnight roosting areas. Specifically, the woodland, farmland, and river areas are the common foraging sites for the crested ibis, while the woodland with large trees is their common overnight site. Therefore, the method proposed in this paper can provide technical support for identifying and protecting the crested ibis’s habitats.
Dose–Response Effects of Bamboo Leaves on Rumen Methane Production, Fermentation Characteristics, and Microbial Abundance In Vitro
Authors: Jo Seong Uk , Lee Shin Ja , Kim Hyun Sang , Eom Jun Sik , Choi Youyoung , Lee Yookyung , Lee Sung Sill
Published: August 2022

Ruminants produce large amounts of methane as part of their normal digestive processes. Recently, feed additives were shown to inhibit the microorganisms that produce methane in the rumen, consequently reducing methane emissions. The objective of this study was to evaluate the dose–response effect of Phyllostachys nigra var. henonis (PHN) and Sasa borealis supplementation on in vitro rumen fermentation, methane, and carbon dioxide production, and the microbial population. An in vitro batch culture system was used, incubated without bamboo leaves (control) or with bamboo leaves (0.3, 0.6, and 0.9 g/L). After 48 h, total gas, methane, and carbon dioxide production decreased linearly with an increasing dose of bamboo leaves supplementation. The total volatile fatty acid, acetate, and acetate-to-propionate ratio were affected quadratically with increasing doses of bamboo leaves supplementation. In addition, propionate decreased linearly. Butyrate was increased linearly with increasing doses of PHN supplementation. The absolute values of total bacteria and methanogenic archaea decreased linearly and quadratically with an increasing dose of PHN treatment after 48 h. These results show that bamboo leaves supplementation can reduce methane production by directly affecting methanogenic archaea, depressing the metabolism of methanogenic microbes, or transforming the composition of the methanogenic community. These results need to be validated using in vivo feeding trials before implementation.
Wild Carnivore Survey of Echinococcus Species in Slovenia
Authors: Bandelj Petra , Blagus Rok , Vengušt Gorazd , Žele Vengušt Diana
Published: August 2022

Wild carnivores are definitive hosts and potential reservoirs for the tapeworm Echinococcus sp. which can cause cystic and alveolar echinococcosis. Both are considered neglected and important food-borne pandemics. This study is the first to molecularly test Slovenian wild carnivores for Echinococcus species that can cause disease in humans. Fecal samples from 210 red foxes (Vulpes vulpes), 42 wolves (Canis lupus), 39 golden jackals (Canis aureus), 18 martens (Marten sp.), 2 Eurasian lynx (Lynx lynx), 2 European badger (Meles meles), and 1 Eurasian otter (Lutra lutra) were examined for Echinococcus granulosus sensu lato (EGsl: E. granulosus sensu stricto, E. canadensis) and E. multilocularis (EM) using real-time PCR. Red foxes (29.1%) and golden jackals (18%) were positive for EM. All animals examined were negative for EGsl. Univariate analysis showed no significant differences in EM prevalence with respect to animal species (red fox vs., golden jackal) (p = 0.22), age (p = 0.12), and sex (p = 0.18). Prevalence of EM was associated with the region (p < 0.001), with regions in central and southern Slovenia having higher EM prevalence and risk of infection. Due to the increase in population and expansion of habitat, the golden jackal may soon become as important definitive host for EM as the red fox.
Apicomplexans in Goat: Prevalence of Neospora caninum, Toxoplasma gondii, Cryptosporidium spp., Eimeria spp. and Risk Factors in Farms from Ecuador
Authors: Celi Kevin , Guzmán Lucía , Rey-Valeirón Catalina
Published: August 2022

Neospora caninum, Toxoplasma gondii, Cryptosporidium and Eimeria cause severe impacts on the productivity of goat herds. The objectives of the present study were to establish the prevalence of these apicomplexans in goat farms from Ecuador; to evaluate a rapid test for Cryptosporidium diagnosis and to identify the risk factors associated with the infections. A questionnaire was designed to obtain information from 24 goat farms from Zapotillo, Garza Real, Cazaderos, Limones and Paletillas parishes in Ecuador. Blood (n = 388) and feces (n = 391) samples were collected. Indirect ELISA and standard parasitological assays were carried out to evaluate the seroprevalence of N. caninum and T. gondii and to detect oocysts of Cryptosporidium and Eimeria. The overall prevalence values of N. caninum and T. gondii were 12.11% and 18.20%, Cryptosporidium spp. and Eimeria spp. oocysts were detected in 10.49% and 89.51% of the total samples. A low correlation value was found between the results obtained by Ziehl-Nielsen and the rapid test. The multinomial logistic regression analysis revealed that vitamin supplementation, age of diarrhea, frequency of deworming, pasture area, presence of artiodactyls, domestic fowl, administration of sulfas, age group, body condition, abortions, type of pastures and the presence of cattle were risk factors according to the parasite species.
Histone Methyltransferase SETD2 Is Required for Porcine Early Embryonic Development
Authors: Shao Weini , Ning Wei , Liu Chang , Zou Yuanyuan , Yao Yurui , Kang Jiaxin , Cao Zubing
Published: August 2022

SET domain-containing 2 (SETD2) is a methyltransferase that can catalyze the di- and tri-methylation of lysine 36 on histone H3 (H3K36me2/me3). SETD2 frequently mediates H3K36me3 modification to regulate both oocyte maturation and preimplantation embryonic development in mice. However, the specific substrate and function of SETD2 in porcine early embryonic development are still unclear. In this study, SETD2 preferentially catalyzed H3K36me3 to regulate porcine early embryonic development. SETD2 mRNA is dynamically expressed during early embryonic development. Functional studies using an RNA interference (RNAi) approach revealed that the expression levels of SETD2 mRNA were effectively knocked down by siRNA microinjection. Immunofluorescence analysis indicated that SETD2 knockdown (KD) did not affect H3K36me2 modification but significantly reduced H3K36me3 levels, suggesting a preferential H3K36me3 recognition of SETD2 in porcine embryos. Furthermore, SETD2 KD significantly reduced blastocyst rate and disrupted allocation between inner cell mass (ICM) and trophectoderm (TE) lineage. The expression levels of key genes important for specification of the first two lineages apparently decreased in SETD2 KD blastocysts. SETD2 KD markedly increased the apoptotic percentage of cells within embryos and altered the expression of pro- and anti-apoptotic genes. Therefore, our data indicate that SETD2 is essential for porcine early embryonic development.
Supplementation of Molasses-Based Liquid Feed for Cattle Fed on Limpograss Hay
Authors: Abreu Daciele , Dubeux José C. B. , Queiroz Luana Dantas , Jaramillo David , Da Silva Santos Erick Rodrigo , van Cleef Flávia , Vela-Garcia Carlos , DiLorenzo Nicolas , Ruiz-Moreno Martin
Published: August 2022

Two experiments were performed to evaluate the effects of (1) different levels of liquid supplementation (LS) based on molasses enriched with 32% (as fed; 45% on DM basis) crude protein (CP) on intake of Hemarthria altissima hay (LH), digestibility, and rumen fermentation, and (2) different levels of LS based on molasses enriched with 32% CP in the in vitro gas production in LH diets. In Exp. 1, twelve heifers and 12 adult male castrated and cannulated cattle were used. Treatments were allocated in a randomized block design, in four treatments: (CTL) access ad libitum to the LH; (SUP2) ad libitum access to LH and supplementation with 0.9 kg d−1; (SUP4) ad libitum access to LH and supplementation with 1.8 kg d−1 and; (SUP6) ad libitum access to LH with 2.7 kg d−1. In Exp. 2, treatments were carried out in a randomized block design with four different proportions of LH diet: (CTL) 100 LH, (SUP2) 85 LH and 15 LS, (SUP4) 70 LH and 30 LS, (SUP6) 55 LH and 45% LS. In Exp. 1, liquid molasses-based supplementation did not affect LH intake (p > 0.05). Molasses intake improved as the supply increased, not reducing the intake of LH. In Exp. 2, the addition of LS to the LH caused a change in the VFA profile, with an increase in propionate production in vitro.