Patient case: 38-year-old male with Liposarcoma. Genetic variant: CDK4 Amplification. Other conditions: GERD.

Clinical trial: Deciphering Antitumour Response and Resistance With INtratumour Heterogeneity

Summary: DARWIN II is a multi-arm non-randomised phase II trial, Eligible patient will be those who relapse with NSCLC (clinical trials.gov ref. NCT02183883),
  The trial will investigate assess if intra-tumour heterogeneity (clonal vs subclonal actionable mutation) is associated with PFS.
  Patients 1) without an actionable mutation and PDL1 positive or 2) without an actionable mutation and PDL1 negative following first line cytotoxic chemotherapy, will receive MPDL3280A a monoclonal antibody targeting anti-PDL1.
  Patients with BRAFV600 mutations, Her2 Amplification, ALK/RET gene rearrangements will be enrolled into arms treating with vemurafenib, trastuzumab emtansine and alectinib respectively.
  DARWIN II will include extensive exploratory biomarker analysis to investigate a number of genomic and immune markers that may predict response to MPDL3280A and help guide future clinical trial design.

Detailed description: DARWIN II is an exploratory phase II study examining the role of intra-tumour heterogeneity and predicted neo-antigens on the anti-tumour activity of anti-PDL1 immunotherapy.
  It will examine how clonal dominance and intratumour heterogeneity influence outcomes after treatment, offering a unique opportunity to decipher mechanisms of resistance to immunotherapy with anti-PDL1. These data will help improve future study design by developing greater understanding of patient selection for immunotherapies in patients with NSCLC. The relationship between intratumour heterogeneity and cfDNA/CTCs will also be explored in DARWIN II, which may develop tools for patient selection and monitoring to be examined further in future studies. Results from DARWIN II will help to identify a biomarker for anti-PD-L1 therapy which could be used for patient stratification in future phase III trials of molecules targeting this T-cell inhibitory checkpoint. DARWIN II will also provide preliminary data on efficacy of MPDL3280A, which could be used to design randomised studies.
  This is a multicentre non-randomised phase II study based on patients with relapsed NSCLC, who have provided a biopsy sample at the time of relapse.
  The study arms:
  -  Arm 1: Patients either 1) without an actionable mutation and PDL1 positive or 2) without an actionable mutation and PDL1 negative following first line cytotoxic chemotherapy - MPDL3280A
  -  Arm 2: BRAFV600 - vemurafenib
  -  Arm 3: ALK/RET gene rearrangement - alectinib
  -  Arm 4: Her2 Amplification - trastuzumab emtansine

Eligibility: Inclusion Criteria:
  -  Multi-region sequencing data of the primary tumour available
  -  Subjects must be willing to have a biopsy of relapsed disease. Consent will be obtained through the TRACERx study. (TRACERx patients) or using the DARWIN2 trial entry biopsy consent form (non-TRACERx patients). Procurement of the biopsy sample is not necessary at the time of trial registration. However, patients must undergo a biopsy prior to commencement of any trial treatment.
  -  Arm1:
  -  Absence of any actionable mutation and PDL1 positive. OR
  -  Absence of any actionable mutation and PDL1 negative following first line cytotoxic chemotherapy
  -  Arm2: Presence of BRAFV600 mutation
  -  Arm3: Presence of ALK/RET gene fusion and ALK IHC+/RET FISH
  -  Arm4: Presence of HER2 amplification and HER2 IHC2+/3+
  -  Absence of sensitising EGFR mutation (tested according to local protocol). The only exception will be patients who progress on DARWIN1 or on EGFR TKi off-study (if agreed following prior discussion with the CI & UCL CTC)
  -  Written Informed consent for DARWIN2.
  -  ECOG PS 0-2 for arms 1-3, ECOG PS 0-1 for arm 4.
  -  No previous chemotherapy the advanced setting (exception if PDL1 negative an received first line cytotoxic chemotherapy)
  -  Measurable disease by RECIST v1.1. See Appendix 4
  -  At least 18 years of age.
  -  Anticipated life expectancy of at least three months.
  -  Able to swallow and retain oral medication for arms 2 & 3.
  -  Adequate organ function as defined by the following baseline values:
  -  Absolute neutrophil count (ANC) ≥1.5x10^9/L
  -  Platelets ≥100x10^9/L
  -  Serum bilirubin ≤1.5 x upper limit of normal (ULN). (In case of Gilberts syndrome discuss with TMG)
  -  Aspartate aminotransferase (AST) or Alanine aminotransferase (ALT) ≤3xULN or ≤5x ULN if liver metastases are present).
  -  Creatinine clearance must be >30mL/min calculated or measured.
  -  Women with child-bearing potential, or men who are able to father a child, must be willing to practice acceptable methods of birth control during the trial and for 7 months after the end of treatment.
  -  Women of childbearing potential must have a negative pregnancy test within 14 days before the first dose of trial medication.
  Exclusion Criteria:
  -  Suitable for radical radiotherapy.
  -  Palliative radiotherapy within 1 week prior to registration.
  -  Patients with current or pre-existing interstitial lung disease.
  -  Patients with pre-existing autoimmune disease (some exceptions allowed).
  -  Known hypersensitivity to study IMP or to any of the excipients
  -  Inability to understand or to comply with the requirements of the trial, trial protocol or to provide informed consent.
  -  Anti-cancer therapy including chemotherapy, radiation therapy, immunotherapy, biologic therapy, or major surgery within 14 days prior registration.
  -  Treatment with systemic corticosteroids or other systemic immunosuppressive medications (including but not limited to prednisone, dexamethasone, cyclophosphamide, azathioprine, methotrexate, thalidomide, and anti−tumor necrosis factor (TNF) agents) within 2 weeks prior to registration, or anticipated requirement for systemic immunosuppressive medications during the trial (Patients who have received acute, low-dose, systemic immunosuppressant medications (e.g., a one-time dose of dexamethasone for nausea) may be enroled in the trial after discussion with CTC. The use of inhaled corticosteroids and mineralocorticoids (e.g., fludrocortisone) is allowed. Low-dose supplemental corticosteroids for adrenocortical insufficiency are allowed).
  -  Known human immunodeficiency virus (HIV), Hepatitis B Virus (HBV), Hepatitis C Virus (HCV) or syphilis infection. Subjects with evidence of hepatitis B virus clearance may be enrolled.
  -  History of other malignancy; Exception: (a) Subjects who have been successfully treated and are disease-free for 3 years, (b) a history of completely resected non-melanoma skin cancer, (c) successfully treated in situ carcinoma, (d) CLL in stable remission, or (e) indolent prostate cancer requiring no or only anti-hormonal therapy with histologically confirmed tumour lesions that can be clearly differentiated from lung cancer target and non-target lesions are eligible.
  -  Patients with symptomatic brain metastases.
  -  The following cardiac abnormalities:
  -  Corrected QT (QTc) interval ≥480 msecs
  -  Arm 4: LVEF <50%
  -  History of acute coronary syndromes (including unstable angina) within the past 6 months
  -  Coronary angioplasty, or stenting within the past 24 weeks
  -  Class III, or IV heart failure as defined by the New York Heart Association (NYHA) functional classification system
  -  History of known arrhythmias (except sinus arrhythmia) within the past 6 months
  -  History of myocardial infarction within the past 6 months
  -  Patients taking medicines known to prolong QT interval 2 weeks prior to registration. Use also not permitted while on trial
  -  Arm 3 - Use of potent inhibitors and inducers of CYP3A, 2 weeks or 5 half-lives (whichever is longer) prior to registration. Use also not permitted while on trial.
  -  Uncontrolled medical conditions (i.e., diabetes mellitus, hypertension, uncorrectable electrolyte abnormalities (including magnesium etc), psychological, familial, sociological, or geographical conditions that do not permit compliance with the protocol; or unwillingness or inability to follow the procedures required in the protocol.
  -  Pregnant, lactating or actively breastfeeding females

Relevance to patient case: not relevant