text: RPS-BLAST 2.2.18 [Mar-02-2008]
  
  Database: CDD.v.2.13 
             24,083 sequences; 5,982,884 total letters
  
  Searching..................................................done
  
  Query= lcl|YP_134044.1|Plus1 F 4437 4742 NC_006391 hypothetical
  protein {Haloarcula marismortui ATCC 43049}
           (101 letters)
  
   ***** No hits found ******
  
  
  Query= lcl|YP_134045.1|Plus1 F 4742 5065 NC_006391 transcription
  regulator {Haloarcula marismortui ATCC 43049}
           (107 letters)
  
   ***** No hits found ******
  
  
  Query= lcl|YP_134046.1|Plus1 F 5275 5808 NC_006391 hypothetical
  protein {Haloarcula marismortui ATCC 43049}
           (177 letters)
  
   ***** No hits found ******
  
  
    Database: CDD.v.2.13
      Posted date:  Nov 8, 2007  6:30 PM
    Number of letters in database: 5,982,884
    Number of sequences in database:  24,083
    
  Lambda     K      H
     0.308    0.126    0.352 
  
  Gapped
  Lambda     K      H
     0.267   0.0606    0.140 
  
  
  Matrix: BLOSUM62
  Gap Penalties: Existence: 11, Extension: 1
  Number of Sequences: 24083
  Number of Hits to DB: 200,397,591
  Number of extensions: 14170162
  Number of successful extensions: 17150
  Number of sequences better than 1.0e-005: 6
  Number of HSP's gapped: 17124
  Number of HSP's successfully gapped: 29
  Length of database: 5,982,884
  Neighboring words threshold: 11
  Window for multiple hits: 40
  X1: 15 ( 6.7 bits)
  X2: 38 (14.6 bits)
  X3: 64 (24.7 bits)
  S1: 40 (20.8 bits)
  S2: 102 (43.3 bits)
  