##fileformat=VCFv4.2 ##fileDate=20241012 ##source=OncoGAN-v0.1 ##reference=hg19 ##INFO= ##INFO= #CHROM POS ID REF ALT QUAL FILTER INFO 1 3546150 sim13 G A . . AF=0.13;MS=SBS1 1 7871790 sim13 G A . . AF=0.08;MS=SBS1 1 14147899 sim13 C A . . AF=0.19;MS=SBS8 1 40874293 sim13 G A . . AF=0.09;MS=SBS1 1 49553973 sim13 C T . . AF=0.18;MS=SBS1 1 53505960 sim13 G T . . AF=0.14;MS=SBS1 1 56822328 sim13 G T . . AF=0.65;MS=SBS1 1 71947793 sim13 C T . . AF=0.11;MS=SBS5 1 87031823 sim13 C A . . AF=0.1;MS=SBS8 1 90778446 sim13 A G . . AF=0.25;MS=SBS5 1 92000943 sim13 C T . . AF=0.1;MS=SBS1 1 93874610 sim13 G A . . AF=0.09;MS=SBS1 1 98641529 sim13 T G . . AF=0.13;MS=SBS5 1 104368299 sim13 A G . . AF=0.41;MS=SBS5 1 106273061 sim13 A T . . AF=0.13;MS=SBS8 1 107693073 sim13 G A . . AF=0.17;MS=SBS1 1 145647030 sim13 A C . . AF=0.23;MS=SBS8 1 157647617 sim13 AATAG A . . AF=0.13;MS=DEL 1 158829376 sim13 G T . . AF=0.27;MS=SBS8 1 166019977 sim13 G A . . AF=0.18;MS=SBS5 1 182240979 sim13 C T . . AF=0.06;MS=SBS1 1 188193117 sim13 C G . . AF=0.1;MS=SBS8 1 221294631 sim13 T C . . AF=0.19;MS=SBS5 1 222265057 sim13 A T . . AF=0.32;MS=SBS8 1 223616133 sim13 A C . . AF=0.09;MS=SBS5 1 224209291 sim13 C T . . AF=0.12;MS=SBS1 1 237169415 sim13 G A . . AF=0.42;MS=SBS1 2 1256875 sim13 C T . . AF=0.4;MS=SBS1 2 35707410 sim13 G T . . AF=0.13;MS=SBS8 2 39445214 sim13 A G . . AF=0.18;MS=SBS5 2 55730524 sim13 T A . . AF=0.37;MS=SBS1 2 78999330 sim13 G GC . . AF=0.15;MS=INS 2 81462501 sim13 G A . . AF=0.17;MS=SBS5 2 103092757 sim13 G A . . AF=0.1;MS=SBS1 2 124414605 sim13 C T . . AF=0.23;MS=SBS1 2 125271905 sim13 T A . . AF=0.14;MS=SBS8 2 128685975 sim13 C T . . AF=0.14;MS=SBS5 2 132964009 sim13 T G . . AF=0.1;MS=SBS1 2 136599776 sim13 C T . . AF=0.11;MS=SBS1 2 174353246 sim13 G A . . AF=0.12;MS=SBS1 2 184533735 sim13 T G . . AF=0.1;MS=SBS5 2 192470739 sim13 C T . . AF=0.14;MS=SBS1 2 196337810 sim13 C A . . AF=0.09;MS=SBS8 2 197111265 sim13 C T . . AF=0.31;MS=SBS1 2 199779460 sim13 C T . . AF=0.21;MS=SBS5 2 223774745 sim13 C A . . AF=0.09;MS=SBS5 3 5296436 sim13 G A . . AF=0.18;MS=SBS1 3 19415998 sim13 G A . . AF=0.13;MS=SBS1 3 21243179 sim13 C T . . AF=0.08;MS=SBS1 3 26300252 sim13 G T . . AF=0.46;MS=SBS1 3 54011655 sim13 G A . . AF=0.32;MS=SBS1 3 70073875 sim13 C T . . AF=0.15;MS=SBS1 3 70430288 sim13 T G . . AF=0.2;MS=SBS5 3 70477610 sim13 G C . . AF=0.39;MS=SBS5 3 79065672 sim13 C A . . AF=0.45;MS=SBS5 3 84111675 sim13 G A . . AF=0.36;MS=SBS1 3 88605598 sim13 T C . . AF=0.16;MS=SBS5 3 94207295 sim13 G T . . AF=0.27;MS=SBS8 3 141118725 sim13 C T . . AF=0.28;MS=SBS5 3 141260501 sim13 G A . . AF=0.17;MS=SBS8 3 148401632 sim13 A G . . AF=0.29;MS=SBS5 3 184917923 sim13 G T . . AF=0.31;MS=SBS5 4 17867506 sim13 A T . . AF=0.06;MS=SBS5 4 19169449 sim13 T G . . AF=0.14;MS=SBS5 4 29625286 sim13 G T . . AF=0.15;MS=SBS8 4 31157017 sim13 A T . . AF=0.07;MS=SBS5 4 43107853 sim13 T C . . AF=0.1;MS=SBS8 4 68101774 sim13 C T . . AF=0.09;MS=SBS1 4 68788432 sim13 T A . . AF=0.25;MS=SBS8 4 75630441 sim13 G A . . AF=0.17;MS=SBS1 4 76151183 sim13 A G . . AF=0.45;MS=SBS5 4 83250360 sim13 G T . . AF=0.21;MS=SBS8 4 98226428 sim13 G A . . AF=0.16;MS=SBS1 4 100286140 sim13 C T . . AF=0.13;MS=SBS1 4 116094538 sim13 G A . . AF=0.29;MS=SBS1 4 117966292 sim13 C T . . AF=0.21;MS=SBS1 4 125613708 sim13 C T . . AF=0.24;MS=SBS1 4 128775103 sim13 T A . . AF=0.17;MS=SBS8 4 132078365 sim13 G T . . AF=0.24;MS=SBS8 4 133843250 sim13 T C . . AF=0.15;MS=SBS5 4 135867867 sim13 A G . . AF=0.33;MS=SBS5 4 136749026 sim13 C A . . AF=0.15;MS=SBS8 4 145058272 sim13 C A . . AF=0.08;MS=SBS8 4 150387869 sim13 C T . . AF=0.22;MS=SBS5 4 153100894 sim13 G A . . AF=0.36;MS=SBS1 4 166737378 sim13 G T . . AF=0.44;MS=SBS1 4 179284344 sim13 C T . . AF=0.2;MS=SBS5 4 182005955 sim13 A G . . AF=0.11;MS=SBS8 5 13964076 sim13 C T . . AF=0.21;MS=SBS1 5 14527734 sim13 G A . . AF=0.16;MS=SBS1 5 24892487 sim13 G A . . AF=0.39;MS=SBS1 5 26743375 sim13 G A . . AF=0.35;MS=SBS1 5 27898593 sim13 C A . . AF=0.14;MS=SBS8 5 39953881 sim13 T A . . AF=0.19;MS=SBS8 5 45070921 sim13 C T . . AF=0.38;MS=SBS5 5 50865952 sim13 G A . . AF=0.19;MS=SBS5 5 51533277 sim13 T A . . AF=0.09;MS=SBS8 5 52028955 sim13 C T . . AF=0.21;MS=SBS1 5 61874612 sim13 G A . . AF=0.18;MS=SBS1 5 91092012 sim13 C A . . AF=0.42;MS=SBS8 5 93061138 sim13 C T . . AF=0.37;MS=SBS1 5 100069411 sim13 G T . . AF=0.22;MS=SBS8 5 103354571 sim13 T A . . AF=0.16;MS=SBS8 5 115864797 sim13 C T . . AF=0.14;MS=SBS5 5 121803364 sim13 G T . . AF=0.42;MS=SBS8 5 128132429 sim13 G A . . AF=0.1;MS=SBS5 5 129021412 sim13 A T . . AF=0.25;MS=SBS5 5 147381664 sim13 C T . . AF=0.17;MS=SBS5 5 150060824 sim13 G A . . AF=0.16;MS=SBS1 5 153822824 sim13 G GG . . AF=0.3;MS=INS 5 159557918 sim13 G C . . AF=0.25;MS=SBS5 5 175056728 sim13 T G . . AF=0.62;MS=SBS5 5 179360483 sim13 G T . . AF=0.08;MS=SBS8 6 36886908 sim13 C T . . AF=0.12;MS=SBS5 6 38850238 sim13 A T . . AF=0.22;MS=SBS8 6 49516033 sim13 C T . . AF=0.08;MS=SBS5 6 54035901 sim13 C A . . AF=0.12;MS=SBS8 6 54622599 sim13 G A . . AF=0.1;MS=SBS5 6 74448925 sim13 G A . . AF=0.51;MS=SBS5 6 80612418 sim13 A T . . AF=0.49;MS=SBS8 6 100937824 sim13 C G . . AF=0.09;MS=SBS5 6 101288987 sim13 C A . . AF=0.27;MS=SBS8 6 104203671 sim13 C T . . AF=0.08;MS=SBS5 6 107307786 sim13 G A . . AF=0.09;MS=SBS5 6 116091557 sim13 C T . . AF=0.26;MS=SBS1 6 125420593 sim13 T A . . AF=0.29;MS=SBS8 6 145458696 sim13 G A . . AF=0.16;MS=SBS1 6 147829636 sim13 C A . . AF=0.15;MS=SBS1 6 150603477 sim13 G T . . AF=0.24;MS=SBS1 6 163805103 sim13 T A . . AF=0.17;MS=SBS8 7 3935216 sim13 C A . . AF=0.03;MS=SBS1 7 7145833 sim13 G C . . AF=0.29;MS=SBS5 7 16138181 sim13 A T . . AF=0.14;MS=SBS8 7 17620871 sim13 A T . . AF=0.36;MS=SBS8 7 20439006 sim13 G T . . AF=0.22;MS=SBS8 7 46001802 sim13 C T . . AF=0.51;MS=SBS5 7 56903547 sim13 A G . . AF=0.11;MS=SBS5 7 64275248 sim13 G A . . AF=0.22;MS=SBS5 7 67729926 sim13 G A . . AF=0.7;MS=SBS1 7 81134807 sim13 A G . . AF=0.14;MS=SBS5 7 83748386 sim13 A T . . AF=0.3;MS=SBS5 7 87969960 sim13 G T . . AF=0.09;MS=SBS5 7 96226472 sim13 C T . . AF=0.12;MS=SBS1 7 119280082 sim13 A T . . AF=0.38;MS=SBS8 7 120980230 sim13 G A . . AF=0.08;MS=SBS1 7 121336150 sim13 A G . . AF=0.11;MS=SBS5 7 137575461 sim13 C T . . AF=0.3;MS=SBS1 7 140161509 sim13 C T . . AF=0.27;MS=SBS1 7 140457324 sim13 G A . . AF=0.2;MS=SBS1 7 140460241 sim13 A G . . AF=0.27;MS=driver_BRAF_Intron 8 9801624 sim13 T A . . AF=0.31;MS=SBS8 8 11943893 sim13 G A . . AF=0.23;MS=SBS5 8 20727383 sim13 C T . . AF=0.33;MS=SBS1 8 26855992 sim13 A C . . AF=0.08;MS=SBS5 8 29904812 sim13 G A . . AF=0.47;MS=SBS1 8 31534214 sim13 T A . . AF=0.39;MS=SBS8 8 36218641 sim13 G A . . AF=0.34;MS=SBS5 8 36542135 sim13 T A . . AF=0.21;MS=SBS8 8 40942366 sim13 G A . . AF=0.07;MS=SBS5 8 53201522 sim13 C T . . AF=0.29;MS=SBS1 8 59393053 sim13 T A . . AF=0.36;MS=SBS1 8 88392547 sim13 G C . . AF=0.14;MS=SBS8 8 94551360 sim13 G T . . AF=0.21;MS=SBS5 8 100539419 sim13 TT T . . AF=0.12;MS=DEL 8 110564199 sim13 C A . . AF=0.11;MS=SBS8 8 110622173 sim13 G C . . AF=0.13;MS=SBS5 8 111874751 sim13 G T . . AF=0.07;MS=SBS8 8 111963206 sim13 C A . . AF=0.35;MS=SBS5 9 10430005 sim13 A T . . AF=0.08;MS=SBS5 9 19551539 sim13 C T . . AF=0.4;MS=SBS1 9 22440111 sim13 C T . . AF=0.18;MS=SBS8 9 23927767 sim13 C A . . AF=0.21;MS=SBS8 9 26224752 sim13 G A . . AF=0.07;MS=SBS1 9 28393932 sim13 G A . . AF=0.18;MS=SBS5 9 31071696 sim13 G A . . AF=0.52;MS=SBS1 9 31192550 sim13 A G . . AF=0.26;MS=SBS5 9 44905369 sim13 G C . . AF=0.13;MS=SBS5 10 3129677 sim13 C T . . AF=0.27;MS=SBS1 10 20455244 sim13 G C . . AF=0.11;MS=SBS8 10 59621595 sim13 A C . . AF=0.13;MS=SBS5 10 70480285 sim13 G A . . AF=0.17;MS=SBS1 10 84076592 sim13 C T . . AF=0.37;MS=SBS5 11 62268854 sim13 C T . . AF=0.13;MS=SBS1 11 65575601 sim13 C T . . AF=0.09;MS=SBS1 11 81440430 sim13 G A . . AF=0.22;MS=SBS8 11 121925179 sim13 G A . . AF=0.13;MS=SBS1 11 122168506 sim13 A C . . AF=0.9;MS=SBS8 11 122909573 sim13 G A . . AF=0.12;MS=SBS1 12 31787304 sim13 C T . . AF=0.08;MS=SBS1 12 65276249 sim13 T A . . AF=0.33;MS=SBS8 12 84715579 sim13 C T . . AF=0.19;MS=SBS1 12 85763637 sim13 C T . . AF=0.27;MS=SBS5 12 87003368 sim13 A G . . AF=0.18;MS=SBS8 12 99285748 sim13 A T . . AF=0.1;MS=SBS8 13 21284207 sim13 C T . . AF=0.13;MS=SBS1 13 35023156 sim13 C G . . AF=0.27;MS=SBS5 13 39953583 sim13 A T . . AF=0.11;MS=SBS5 13 48303205 sim13 C T . . AF=0.17;MS=SBS5 13 55508114 sim13 A T . . AF=0.26;MS=SBS8 13 57744085 sim13 C T . . AF=0.02;MS=SBS1 13 58445653 sim13 A G . . AF=0.17;MS=SBS5 13 63447515 sim13 G A . . AF=0.1;MS=SBS5 13 78460809 sim13 C A . . AF=0.21;MS=SBS8 13 85242806 sim13 C T . . AF=0.09;MS=SBS8 13 91322611 sim13 C T . . AF=0.17;MS=SBS5 13 91918554 sim13 G A . . AF=0.11;MS=SBS1 13 92248729 sim13 C T . . AF=0.16;MS=SBS1 13 93294490 sim13 C A . . AF=0.21;MS=SBS5 13 99359677 sim13 C A . . AF=0.48;MS=SBS8 13 101257817 sim13 T C . . AF=0.19;MS=SBS5 13 102285307 sim13 C T . . AF=0.42;MS=SBS1 13 113234676 sim13 G A . . AF=0.09;MS=SBS1 14 31585816 sim13 C T . . AF=0.15;MS=SBS1 14 45240163 sim13 C T . . AF=0.45;MS=SBS1 14 64723184 sim13 C T . . AF=0.13;MS=SBS1 14 65624576 sim13 C T . . AF=0.5;MS=SBS1 14 76559008 sim13 A G . . AF=0.14;MS=SBS8 14 88224717 sim13 G A . . AF=0.26;MS=SBS1 14 106689327 sim13 C T . . AF=0.39;MS=SBS1 15 20026450 sim13 T A . . AF=0.09;MS=SBS8 15 23858799 sim13 G A . . AF=0.1;MS=SBS1 15 30414805 sim13 C T . . AF=0.18;MS=SBS5 15 40669999 sim13 G A . . AF=0.11;MS=SBS1 15 42041451 sim13 G T . . AF=0.07;MS=SBS5 15 48924151 sim13 A T . . AF=0.26;MS=SBS8 15 50885484 sim13 C T . . AF=0.11;MS=SBS5 15 53289556 sim13 A G . . AF=0.46;MS=SBS5 15 53781445 sim13 T A . . AF=0.16;MS=SBS8 15 69426390 sim13 T C . . AF=0.1;MS=SBS8 15 73941836 sim13 C T . . AF=0.29;MS=SBS8 15 79404599 sim13 C T . . AF=0.11;MS=SBS1 15 85102611 sim13 C A . . AF=0.1;MS=SBS8 16 56783946 sim13 C T . . AF=0.1;MS=SBS1 16 59089423 sim13 A G . . AF=0.13;MS=SBS8 16 79320443 sim13 G A . . AF=0.09;MS=SBS1 17 9060760 sim13 G T . . AF=0.36;MS=SBS5 17 10672054 sim13 G A . . AF=0.08;MS=SBS5 17 25850396 sim13 C A . . AF=0.08;MS=SBS8 17 43536443 sim13 G A . . AF=0.13;MS=SBS1 18 8678617 sim13 TT T . . AF=0.25;MS=DEL 18 10709874 sim13 G C . . AF=0.39;MS=SBS5 18 24711806 sim13 C T . . AF=0.5;MS=SBS1 18 25338809 sim13 G T . . AF=0.31;MS=SBS5 18 26611364 sim13 G A . . AF=0.1;MS=SBS5 18 30191451 sim13 T G . . AF=0.2;MS=SBS8 18 32856872 sim13 C A . . AF=0.11;MS=SBS5 18 34353910 sim13 C T . . AF=0.21;MS=SBS1 18 36984160 sim13 G T . . AF=0.35;MS=SBS5 18 40946345 sim13 G A . . AF=0.2;MS=SBS1 18 43788729 sim13 G A . . AF=0.21;MS=SBS1 18 45276454 sim13 T C . . AF=0.08;MS=SBS5 18 51851596 sim13 G A . . AF=0.36;MS=SBS1 18 53234110 sim13 A G . . AF=0.12;MS=SBS5 18 67056280 sim13 G T . . AF=0.29;MS=SBS5 18 76602117 sim13 G T . . AF=0.15;MS=SBS5 19 6727995 sim13 G A . . AF=0.11;MS=SBS1 19 12451096 sim13 C T . . AF=0.31;MS=SBS1 19 16223731 sim13 C A . . AF=0.16;MS=SBS8 19 18784482 sim13 G A . . AF=0.22;MS=SBS1 19 36894809 sim13 C A . . AF=0.23;MS=SBS8 19 58844736 sim13 G T . . AF=0.18;MS=SBS8 20 2359745 sim13 C T . . AF=0.08;MS=SBS1 20 16542717 sim13 C T . . AF=0.24;MS=SBS1 20 16865984 sim13 G A . . AF=0.32;MS=SBS1 20 37843997 sim13 G A . . AF=0.24;MS=SBS5 20 40124937 sim13 C A . . AF=0.16;MS=SBS8 20 52624745 sim13 C T . . AF=0.1;MS=SBS1 21 24060924 sim13 C T . . AF=0.12;MS=SBS5 21 25238756 sim13 G A . . AF=0.1;MS=SBS1 22 27647336 sim13 C T . . AF=0.16;MS=SBS1 22 37628464 sim13 G A . . AF=0.35;MS=SBS1 X 3696762 sim13 G T . . AF=0.12;MS=SBS5 X 7555268 sim13 G A . . AF=0.65;MS=SBS5 X 17261802 sim13 T C . . AF=0.12;MS=SBS5 X 24844926 sim13 CTT C . . AF=0.26;MS=DEL X 53015281 sim13 T C . . AF=0.08;MS=SBS5 X 56602212 sim13 T G . . AF=0.61;MS=SBS5 X 57514538 sim13 G T . . AF=0.36;MS=SBS8 X 62369111 sim13 T A . . AF=0.22;MS=SBS8 X 68789884 sim13 T C . . AF=0.1;MS=SBS5 X 79018179 sim13 C T . . AF=0.25;MS=SBS1 X 82560728 sim13 T C . . AF=0.38;MS=SBS1 X 87342607 sim13 G T . . AF=0.08;MS=SBS1 X 88851267 sim13 C A . . AF=0.14;MS=SBS8 X 94015471 sim13 T A . . AF=0.17;MS=SBS8 X 109801812 sim13 C T . . AF=0.13;MS=SBS1 X 120811001 sim13 G A . . AF=0.3;MS=SBS5 X 121397833 sim13 G T . . AF=0.15;MS=SBS8 X 126261011 sim13 A T . . AF=0.26;MS=SBS8 X 139619443 sim13 G A . . AF=0.1;MS=SBS1 X 143983964 sim13 T A . . AF=0.11;MS=SBS5 X 152586246 sim13 G A . . AF=0.26;MS=SBS1 X 153089639 sim13 C T . . AF=0.38;MS=SBS1 X 153914377 sim13 A T . . AF=0.13;MS=SBS8 X 154854362 sim13 A C . . AF=0.2;MS=SBS5 Y 8172976 sim13 G A . . AF=0.23;MS=SBS1 Y 15724701 sim13 C T . . AF=0.2;MS=SBS1