A POTENTIAL EFFECTOR FOR THE GRB7 FAMILY OF SIGNALLING PROTEINS

Abstract: A novel polynucleotide molecule is disclosed which encodes a candidate effector protein for the Grb7 family of signalling proteins. Detection of the protein in a sample such as a homogenised tissue sample should provide a useful tumour marker and/or prognostic indicator for certain human cancers such as breast and prostate cancer.

Description: A POTENTIAL EFFECTOR FOR THE GRB7 FAMILY OF SIGNALLING PROTEINS Field of the Invention: The present invention relates to a novel polynucleotide molecule encoding a candidate effector protein for the Grb7 family of signalling proteins. Detection of the encoded protein in a tissue sample should provide a useful tumour marker and/or prognostic indicator. Furthermore, antagonism of the interaction between Grb7 family members and the encoded protein should provide a novel treatment strategy for human diseases exhibiting aberrant receptor tyrosine kinase (RTK) signalling (e.g. cancer). Background of the Invention RTKs play a major role in the regulation of cellular growth, differentiation, motility and metabolism by converting an extracellular signal in the form of the binding of a specific hormone or growth factor to the activation of specific signalling pathways and hence modes of intracellular communication (Schlessinger and Ullrich, Neuron 9. 383-391. 1992). Activation of RTKs results in both autophosphorylation of the receptor and the phosphorylation of downstream targets on tyrosine residues. It has become evident over the last decade that key elements in receptor-substrate and other protein-protein interactions in RTK signalling are src homology (SH)2 domains. SH2 domains are conserved modules of approximately 100 amino acids found in a wide variety of signalling molecules which bind to short tyrosine-phosphorylated peptide sequences. The specificity of interaction is determined both by the nature of the amino acids flanking the phosphotyrosine residue in the target peptide and residues in the SH2 domain which interact with these sites (Pawson, Nature 373. 573-580. 1995). SH2-domain containing proteins can be divided into two classes: those which possess a catalytic function (e.g. the cytoplasmic tyrosine kinase c-src and the tyrosine phosphatase SH-PTP2) and those which consist entirely of non-catalytic protein domains (eg Grb2). the adaptor sub-class. The function of the latter class is to link separate catalytic subunits to a tyrosine- phosphorylated receptor or signalling intermediate, and other non-catalytic protein modules are often involved in these interactions. For example. SH3 and WW domains (conserved regions of approximately 50 and 40 amino acids, respectively) bind proline-rich peptide ligands. and pleckstrin homology domains (approximately 100 amino acids) interact with both specific phospholipid and protein targets (Pawson, 1995 supra). The Grb7 family represents a family of SH2 domain-containing adaptors which currently contains three members: Grb7. 10 and 14 (Margolis et al, Proc. Natl. Acad. Sci. USA 89, 8894-8898. 1992: Stein et al. EMBO J 13, 1331-1340, 1994; Ooi et al, Oncogene 10. 1621-1630. 1995: Daly et al. J. Biol. Chem. 271, 12502-12510, 1996). These proteins share a common overall architecture, consisting of an N-terminal region containing a highly conserved proline-rich decapeptide motif, a central region harbouring a PH domain and a C-terminal SH2 domain. The central region of approximately 300 amino acids bears significant homology to the C. elegans protein miglO, which is required for long range neuronal migration in embryos, otherwise the Grb7 family and miglO are structurally distinct. However, they exhibit differences in both SH2 selectivity towards RTKs (Janes et al, J. Biol. Chem. 272, 8490-8497, 1997) and tissue distribution. The family has therefore evolved to link particular receptors to downstream effectors in a tissue- specific manner. Interestingly, the genes encoding this family appear to have co-segregated with ERBB family genes during evolution. Thus GRB7. 10 and 14 are linked to ERBB2, ERBBl (epidermal growth factor receptor) and ERBB4, respectively (Stein et al 1994 supra; Ooi et al, 1995 supra: Baker ef al, Genomics 36, 218-220, 1996). The juxtaposition of GRB7 and ERBB2 leads to common co-amplification in human breast cancers, and since the two gene products are functionally linked, likely up-regulation of an undefined erbB2 signalling pathway. Furthermore, GRB14 also exhibits differential expression in human breast cancers (Daly et al, 1996 supra). These two proteins may therefore modulate RTK signalling in this disease. In order to identify proteins which bind to this family and therefore identify candidate effectors, we performed a genetic screen using the yeast two hybrid system and Grbl4 "bait". This application describes the cloning and characterization of a novel interacting protein, currently designated 2.2412. Disclosure of the Invention: Thus, in a first aspect, the present invention provides an isolated polynucleotide molecule encoding a candidate effector protein for the Grb7 family of signalling proteins, wherein the polynucleotide molecule comprises a nucleotide sequence having at least 75% sequence identity to that shown as SEQ ID NO: 1. Preferably, the polynucleotide molecule comprises a nucleotide sequence having at least 85%, more preferably at least 95%. sequence identity to that shown as SEQ ID NO: 1. Most preferably, the polynucleotide molecule comprises a nucleotide sequence encoding a polypeptide comprising an amino acid sequence substantially corresponding to that shown as SEQ ID NO: 2. In a preferred embodiment of the invention of the first aspect, the polynucleotide molecule comprises a nucleotide sequence which substantially corresponds to that shown as SEQ ID NO: 1. The polynucleotide molecule may be a dominant negative mutant which encodes a gene product causing an altered phenotype by. for example, reducing or eliminating the activity of endogenous effector proteins of the Grb7 family of signalling proteins. The polynucleotide molecule may be incorporated into plasmids or expression vectors (including viral vectors), which may then be introduced into suitable host cells such as bacterial, yeast, insect and mammalian host cells. Such host cells may be used to express the protein encoded by the polynucleotide molecule. Accordingly, in a second aspect, the present invention provides a host cell transformed with the polynucleotide molecule of the first aspect. In a third aspect, the present invention provides a method of producing a protein, comprising culturing the host cell of the second aspect under conditions suitable for the expression of the polynucleotide molecule and optionally recovering the protein. Preferably, the host cell is mammalian or of insect origin. Where the cell is mammalian, it is presently preferred that it be a Chinese hamster ovary (CHO) cell or human embryonic kidney (HEK) 293 cell. Where the host cell is of insect origin, it is presently preferred that it be an insect Sf9 cell. In a fourth aspect, the present invention provides a purified protein encoded by the polynucleotide molecule of the first aspect. In a preferred embodiment of this aspect, the purified protein comprises an amino acid sequence substantially corresponding to that shown as SEQ ID NO: 2. In a fifth aspect, the present invention provides a fusion protein comprising an amino acid sequence substantially corresponding to that shown as SEQ ID NO: 2. Fusion proteins according to the fifth aspect may include an N- terminal fragment of a protein such as β-galactosidase to assist in the expression and selection of host cells expressing candidate effector protein, or may include a functional fragment of any other suitable protein to confer additional activity(ies). In a sixth aspect, the present invention provides an antibody or fragment thereof which specifically binds to the protein of the fourth aspect. The antibody may be monoclonal or polyclonal. however, it is presently preferred that the antibody is a monoclonal antibody. Suitable antibody fragments include Fab, F(ab') 2 and scFv. In a seventh aspect, the present invention provides an oligonucleotide probe comprising a nucleotide sequence of at least 12 nucleotides. the oligonucleotide probe comprising a nucleotide sequence such that the oligonucleotide probe selectively hybridises to the polynucleotide molecule of the first aspect under high stringency conditions (Sambrook et al.. Molecular Cloning: a Laboratoiγ Manual. Second Edition. Cold Spring Harbor Laboratory Press). In a preferred embodiment of this aspect, the oligonucleotide probe is labelled. In a further preferred embodiment of this aspect, the oligonucleotide probe comprises a nucleotide sequence of at least 18 nucleotides. In an eighth aspect, the present invention provides a method of detecting in a sample the presence of an effector protein for the Grb7 family of proteins, the method comprising reacting the sample with an antibody or fragment thereof the sixth aspect, and detecting the binding of the antibody or fragment thereof. The method of the eighth aspect may be conducted using any immunoassays well known in the art (e.g. ELISA). The sample may be, for example, a cell lysate or homogenate prepared from a tissue biopsy. In a ninth aspect, the present invention provides a method of detecting in a sample the presence of mRNA encoding an effector protein for the Grb7 family of proteins, the method comprising reacting the sample with an oligonucleotide probe of the seventh aspect, and detecting the binding of the probe. The method of the ninth aspect may be conducted using any hybridisation assays well known in the art (e.g. Northern blot). The sample may be a poly(A) RNA preparation or homogenate prepared from a tissue biopsy. Grb7 family proteins exhibit differential expression in certain human cancers (particularly breast and prostate cancer) and may therefore be involved in tumour progression. Detection of the protein encoded by the cDNA 2.2412 in a sample should provide a useful tumour marker and/or prognostic indicator for these cancers. Furthermore, the interaction of Grb7 family members with 2.2412 may provide a novel target for therapeutic intervention. It is to be understood that methods of detecting suitable agonists and methods of therapy utilising detected agonists also form part of the present invention. The term "substantially corresponds" as used herein in relation to the nucleotide sequence shown as SEQ ID NO: 1 is intended to encompass minor variations in the nucleotide sequence which due to degeneracy in the DNA code do not result in a change in the encoded protein. Further, this term is intended to encompass other minor variations in the sequence which may be required to enhance expression in a particular system but in which the variations do not result in a decrease in biological activity of the encoded protein. The term "substantially corresponding" as used herein in relation to the amino acid sequences shown as SEQ ID NO: 2 is intended to encompass minor variations in the amino acid sequences which do not result in a decrease in biological activity of the protein. These variations may include conservative amino acid substitutions. The substitutions envisaged are:- G, A, V, I, L, M: D. E; N, Q; S, T; K, R, H: F. Y, W, H: and P. Nα-alkalamino acids. The terms "comprise", "comprises" and "comprising" as used throughout the specification are intended to refer to the inclusion of a stated step, component or feature of group of steps, components of features with or without the inclusion of a further step, component or feature or group of steps, components or features. The invention will hereinafter be described with reference to the accompanying figure and the following, non-limiting example. Brief description of the accompanying figure: Figure 1 provides the nucleotide and amino acid (single letter code) sequence of 2.2412. Numbers refer to distances in base pairs. Ankyrin-type repeat sequences are underlined. An additional repeat sequence is indicated by italics. The stop codon is represented by an asterisk. The original cDNA clone 2.2412 isolated by the two hybrid screen spans nucleotides 694-2664 of this sequence. Figure 2 provides a map of the 2.2412-binding region on Grbl4. A. Structure of the deletion constructs used in the analysis. Gal4 DNA-BD fusion constructs encoding full length Grbl4 (FL). the N-terminal (N). central region (C) and N-terminal + central region (N + C) were generated in the vector pAS2.1. B. Results of β-galactosidase activity assays following transformation of the above plasmids into yeast strain Y190 together with the original 2.2412 cDNA clone in pACT-2. Example: CLONING AND CHARACTERISATION OF 2.2412 Yeast two hybrid screen The yeast two hybrid system exploits protein-protein interactions to reconstitute a functional transcriptional activator which can then be detected using a gene reporter system (Fields and Sternglanz. T7G. 10. 286-292. 1994). The technique takes advantage of the properties of the Gal4 protein of the yeast S. cerevisiae. The Gal4 DNA binding domain (DNA-BD) or activation domain (AD) alone are incapable of inducing transcription. However, an interaction between two proteins synthesized as DNA-BD- and AD-fusions. respectively, brings the Gal4 domains into close proximity and results in transcriptional activation of two reporter genes [HIS3 and LacZ] which can be monitored by growth on selective medium and biochemical assays. A plasmid construct encoding a Gal4 DNA-BD-Grbl4 fusion was generated as follows. The plasmid GRBl 4/pRcCMVF containing full length GRBl 4 cDNA (Daly et al. 1996) was restricted with Hindlll and Klenow treated to create blunt ends, and then digested with Bell to release three fragments of approximately 1.1, 4.2 and 1.7 kb. The 1.7 kb fragment was isolated and cloned into the Ndel (Klenow treated) and RαmHI sites of the yeast expression vector pAS2.1 (Clontech) to generate G_ .R_'4/pAS2.1 containing an in-frame fusion of full length Grbl4 with the GAL4 DNA-BD. This construct was introduced by electroporation into the yeast strain CG1945 [MATa, ura3-52, his3-200, ade2-101, lys2-801,trpl-901, leu2-3, 112, gal4-542, gal80-538, cyh r 2. LYS2::GALl UAS-GALl TATA-HIS3, URA3::GAL4i 7 me rs(x3)-CYClTATA-lacZ) selecting for tryptophan prototrophy. The expression of the fusion protein was verified by Western blot analysis with antibodies directed against the Flag epitope and the Gal4 DNA-BD. The recipient strain was then grown to mid-log phase and a human liver cDNA library in the vector pACT2 (Clontech) introduced using the LiAc procedure (Schiestl and Gietz, Curr. Genet. 16. 339-346. 1989). Transformants were then selected for tryptophan, leucine and histidine prototrophy in the presence of 5mM 3-aminotriazole. From a screen of 1x10^ clones, 39 colonies were initially selected on synthetic complete (SC)-leu-his-trp + 3AT medium and were then tested for β-galactosidase activity. 12 clones scored positive in the latter assay and were subjected to cycloheximide (CHX) curing to remove the bait plasmid by streaking out on SC-leu media containing lOug/ml CHX (pAS2-l contains the CYH2 gene which restores CHX sensitivity to CG1945 cells). This enabled confirmation of the bait dependency of LacZ activation and subsequent isolation of the pACT2 plasmids encoding interacting proteins by standard methodology (Philippsen et al, Methods in Enzymology 194, 170-177). Back transformations were then performed in which these pACT2 plasmids were introduced into CG1945 strains containing the bait plasmid (GRRJ!4/pAS2-l) or constructs encoding non-related Gal4 DNA-BD fusions in order to confirm the specificity of the interactions. The DNA sequences of the cDNA inserts were then obtained by cycle sequencing (f-mol kit. Promega) using pACT2-specific and/or clone-specific primers. Based on their nucleotide sequences the 12 interacting clones were classified into 6 independent groups (see Table I). TABLE I: Characterization of cDNA clones isolated by the yeast two hybrid screen. Class No. of Identity Mean RLU Colour intensity clones (Liquid assay) (Filter assa)') 1 6 Nedd4 2.86x10" + + + + 2 2 Htk 1.86x10 s + + 3 1 2.2412 5.18x10° + + + + 4 1 Proteosome 3.88xl0 2 +/- 5 1 Somatostatin 1.45x10^ +/- receptor 6 1 L-arginine :glycine 8.61xlθ '2 +/- amidinotransferase The 2 clones exhibiting activation of both the WSl ;m lπi Z leporter genes were divided into 6 groups bv sequence πtuil vsis of their cDNΛ inserts. Results of - alaclosidase notivitv assnvs peiloi'ined using two methodologies are shown. The liquid e.ultnie-deiived method (Galaeto-bight. TROP1X) is oie quantit tive: i i n sults aie given in mean relative light units (RLU) and are normalized for the piotein content ol the samples Blue/while screening of the rl)NΛ clones was also perlormed using a colonv lift filtei assay (Clontech). The intensity of blue coloui development ovei approximately 2h is scored ft m +/- (very weak) to + + + + (strong). Six clones were partial cDNAs corresponding to Nedd4, a multidomain protein containing a calcium-dependent phospholipid binding (CaLB) domain, four WW domains and a C-terminal region homologous to the E6-AP carboxyl-terminus (Kumar et al, Biochem. Biophys. Res. Commun.185.1155- 1161, 1992: Sudol et al J. Biol. Chem.270, 14733-14741.1995; Huibregtse et al Proc. Natl. Acad. Sci. USA 92.2563-2567, 1995). The latter is likely to confer E3 ubiquitin-protein ligase activity on Nedd4. The pACT2 clones isolated encoded the CaLB domain together with the first 22 amino acids of the first WW domain. Two clones encoded the intracellular region and part of the extracellular domain of Htk. which is a RTK of the Eph family (Bennett et al J. Biol. Chem. 269. 14211-14218. 1994). The recruitment of Grbl4 by Htk is of interest for two reasons. First, the expression profile of both Htk and the murine homologue myk-1 are indicative of a potential role in mammary gland development and neoplasia (Andres et al Oncogene 9. 1461-1467. 1994: Berclaz et al Biochem. Biophys. Res. Comm. 226. 869-875. 1996). Second, Eph family members may be involved in the regulation of cell migration (Tessier- Lavigne, Cell 82. 345-348. 1995), which is intriguing given the homology of the Grb7 family to the C. elegans protein miglO (Stein et al. 1994 supra). A novel cDNA of 1971 bp. designated 2.2412. was also isolated. This clone encoded a polvpeptide of 657 amino acids in frame with the Gal4 DNA-BD. The cDNA did not contain a stop codon. and this, together with the Northern analysis described below, indicated that it was incomplete. This DNA fragment was therefore used as a probe to screen a human placental cDNA library (5' STRETCH PLUS. Clontech. in λgtlO). This resulted in the isolation of two clones, designated clone 8 and clone 12. Clone 8 was approximately 2 kb and overlapped the original 2.2412 clone by 900 bp at the 3' end. This clone provided the carboxy-terminal end of the 2.2412 protein sequence (Figure 1). Clone 12 was approximately 3.5 kb and to date has provided an additional 692 bp of sequence information in the 5' direction. The nucleotide and protein sequence for 2.2412 provided by these overlapping clones is shown in Figure 1. Since a 5' initiation codon has yet to be identified the coding sequence still appears to be incomplete. Further characterization of 2.2412 Database searches using the 2.2412 cDNA sequence revealed significant homology with a large number of proteins containing ankyrin-like repeats. These sequences were first identified as homologous regions between certain cell cvcle regulatory proteins and the Drosophila protein Notch (Breeden and Nasmyth. Nature 329. 651-654. 1987) but subsequently they have been identified in a wide variety of other proteins where they are thought to function in protein-protein interactions (Bork. Proteins 17. 363- 374. 1993). Subsequent analysis of the protein sequence identified 18 consecutive ankyrin repeats and an additional repetitive element (Figure 1). The ankyrin repeat region is followed by a stretch of approximately 40 amino acids rich in serine residues. The remaining C-terminal region has a relatively high content of charged amino acids. Northern analysis of 2.2412 mRNA expression Northern blot analysis of multiple tissue northerns (Clontech) was performed using the original 2.2412 cDNA as a probe. This resulted in the detection of a single mRNA transcript of approximately 7 kb in all tissues examined with the exception of the kidney. Expression was particularly high in skeletal muscle and placenta. The size of this transcript compared to that of the 2.2412 clone indicates that the latter represents only a partial cDNA. Genomic localization of the 2.2412 gene Fluorescence in situ hybridization of the original 2.2412 cDNA to normal metaphases (Baker et al, 1996 supra) and reference to the FRA10A fragile site at 10q23.32 localized the gene to between chromosome 10q23.2 and proximal 10q23.32. Interestingly, deletions in the 10q22-25 region of chromosome 10 have been detected in a variety of human cancers including breast, prostate, renal, small cell lung and endometrial carcinomas, glioblastoma multiforme, melanoma and meningiomas, suggesting the presence of one or more tumour suppressive loci in this region (Li et al, Science 275, 1943-1947. 1997: Steck et al, Nature Genetics 15, 356-362. 1997, and references therein). Two candidate tumour suppressor genes have been identified in this region (MMACl/PTEN and MXIl. Li et al 1997 supra: Steck et al 1997 supra; Albarosa et al, Hum. Genet. 95, 709-711, 1995). Analysis of the interaction between 2.2412 and Grb7 family members cDNAs encoding the full length and N- and C-terminal regions of the original 2.2412 cDNA clone (nucleotides 694-2664, 694-1614 and 1615-2664 of the sequence shown in Figure 1, respectively) were cloned into the vector pGEX4T2 (Pharmacia). The full length construct was generated by subcloning from the pACT2 clone as a Ndel fragment, whereas the shorter constructs were synthesized by directional cloning of PCR products. The corresponding GST-fusion proteins were purified from IPTG-induced bacterial cultures using glutathione-agarose beads (Smith and Johnson, Gene 67, 31-40, 1988). These immobilized fusion proteins were then incubated with lysates from cells expressing Flag epitope-tagged Grbl4 (Daly et al, 1996 supra) or human breast cancer cells expressing high levels of Grb7 (SK-BR-3: Stein et al. 1994) as described previously (Daly et al. 1996). Following washing, bound proteins were detected by Western blot analysis. The results indicated that 2.2412 bound specifically to both Grbl4 and Grb7 _n vitro, and that the N-terminal fusion protein bound more strongly than that derived from the C-terminus. These data, obtained using a different methodology for detecting protein-protein interactions to the yeast two hybrid system, confirm that 2.2412 interacts with Grbl4. Furthermore, 2.2412 also binds Grb7. Consequently 2.2412 appears to represent a general effector for the Grb7 family. Mapping of the 2.2412 binding region on Grbl4 In order to identify the region of Grbl4 that interacts with 2.2412. a series of Grbl4 deletion mutants were generated by cloning PCR fragments synthesized using the appropriate flanking primers into the vector pAS2.1. These fragments spanned the following regions: N-terminus ("N". amino acids 1-110), the central region ("C") encompassing the miglO homology and the "between PH and SH2" (BPS) domain (amino acids 110-437) and the N- terminal and central regions ("N + C", amino acids 1-437). These plasmids were individually transformed into the yeast strain Y190 [MATa, ura3-52, his3-200, ade2-101, lys2-801, trpl-901, leu2-3, 112, gal4A, gal80Δ, cyh r 2, LYS2::GAL1 UAS-HIS3TATA-HIS3, URA3::GALl UAS-GALlTATA-lacZ) and expression of the appropriately sized Gal4 DNA-BD fusion proteins confirmed by Western blotting. Following transformation of the resulting yeast strains with the original 2.2412 cDNA clone in pACT-2, the strength of the interaction was determined by either liquid- or filter-based β- galactosidase assays. The results are presented in Figure 2, and demonstrate that the N-terminal region of Grbl4 is not only required, but is also sufficient, for binding 2.2412. This supports the hypothesis that 2.2412 represents a general effector for the Grb7 family, since the N-terminal region of these proteins contains a highly conserved proline-rich motif which may mediate this interaction. It will be appreciated by persons skilled in the art that numerous variations and/or modifications may be made to the invention as shown in the specific embodiments without departing from the spirit or scope of the invention as broadly described. The present embodiments are. therefore, to be considered in all respects as illustrative and not restrictive. Sequence listings: SEQUENCE LISTING Applicant: Garvan Institute of Medical Research Title of Invention: A potential effector for the Grb7 family of signalling proteins . Current Application Number: Current Filing Date: Prior Application Number : P09388 Prior Application Filing Date: 1997-09-23 Number of ID SEQ Nos : 2 Software: Patentln Ver. 2.0 SEQ ID NO: 1 Length: 3400 Type : DNA Organism: Homo sapiens Sequence: 1 attcctcttc ataatgcatg ctcttttggt catgctgaag tagtcaatct ccttttgcga 60 catggtgcag accccaatgc tcgagataat tggaattata ctcctctcca tgaagctgca 120 attaaaggaa agattgatgt ttgcattgtg ctgttacagc atggagctga gccaaccatc 180 cgaaatacag atggaaggac agcattggat ttagcagatc catctgccaa agcagtgctt 240 actggtgaat ataagaaaga tgaactctta gaaagtgcca ggagtggcaa tgaagaaaaa 300 atgatggctc tactcacacc attaaatgtc aactgccacg caagtgatgg cagaaagtca 360 actccattac atttggcagc aggatataac agagtaaaga ttgtacagct gttactgcaa 420 catggacgtg atgtccatgc taaagataaa ggtgatctgg taccattaca caatgcctgt 480 tcttatggtc attatgaagt aactgaactt ttggtcaagc atggtggctg tgtaaatgca 540 atggacttgt ggcaattcac tcctcttcat gaggcagctt ctaagaacag ggttgaagta 600 tgttctcttc tcttaagtta tggtgcagac ccaacactgc tcaattgtaa gaataaaagt 660 gctatagact tggctcccac accacagtta aaagaaagat tagcatatga atttaaaggc 720 cactcgttgc tgcaagctgc acgagaagct gatgttactc gaatcaaaaa acatctctct 780 ctggaaatgg tgaatttcaa gcatcctcaa acacatgaaa cagcattgca ttgtgctgct 840 gcatctccat atcccaaaag aaagcaaata tgtgaactgt tgctaagaaa aggagcaaac 900 atcaatgaaa agactaaaga attcttgact cctctgcacg tggcatctga gaaagctcat 960 aatgatgttg ttgaagtagt ggtgaaacat gaagcaaagg ttaatgctct ggataatctt 1020 ggtcagactt ctctacacag agctgcatat tgtggtcatc tacaaacctg ccgcctactc 1080 ctgagctatg ggtgtgatcc taacattata tcccttcagg gctttactgc tttacagatg 1140 ggaaatgaaa atgtacagca actcctccaa gagggtatct cattaggtaa ttcagaggca 1200 gacagacaat tgctggaagc tgcaaaggct ggagatgtcg aaactgtaaa aaaactgtgt 1260 actgttcaga gtgtcaactg cagagacatt gaagggcgtc agtctacacc acttcatttt 1320 gcagctgggt ataacagagt gtccgtggtg gaatatctgc tacagcatgg agctgatgtg 1380 catgctaaag ataaaggagg ccttgtacct ttgcacaatg catgttctta cggacattat 1440 gaagttgcag aacttcttgt taaacatgga gcagtagtta atgtagctga tttatggaaa 1500 tttacacctt tacatgaagc agcagcaaaa ggaaaatatg aaatttgcaa acttctgctc 1560 cagcatggtg cagaccctac aaaaaaaaac agggatggaa atactccttt ggatcttgtt 1620 aaagatggag atacagatat tcaagatctg cttaggggag atgcagcttt gctagatgct 1680 gccaagaagg gttgtttagc cagagtgaag aagttgtctt ctcctgataa tgtaaattgc 1740 cgcgataccc aaggcagaca ttcaacacct ttacatttag cagctggtta taataattta 1800 gaagttgcag agtatttgtt acaacacgga gctgatgtga atgcccaaga caaaggagga 1860 cttattcctt tacataatgc agcatcttac gggcatgtag atgtagcagc tctactaata 1920 aagtataatg catctctcaa tgccacggac aaatgggctt tcacaccttt gcacgaagca 1980 gcccaaaagg gacgaacaca gctttgtgct ttgttgctag cccatggagc tgacccgact 2040 cttaaaaatc aggaaggaca aacaccttta gatttagttt cagcagatga tgtcagcgct 2100 cttctgacag cagccatgcc cccatctgct ctgccctctt gttacaagcc tcaagtgctc 2160 aatggtgtga gaagcccagg agccactgca gatgctctct cttcaggtcc atctagccca 2220 tcaagccttt ctgcagccag cagtcttgac aacttatctg ggagtttttc agaactgtct 2280 tcagtagtta gttcaagtgg aacagagggt gcttccagtt tggagaaaaa ggaggttcca 2340 ggagtagatt ttagcataac tcaattcgta aggaatcttg gacttgagca cctaatggat 2400 atatttgaga gagaacagat cactttggat gtattagttg agatggggca caaggagctg 2460 aaggagattg gaatcaatgc ttatggacat aggcacaaac taattaaagg agtcgagaga 2520 cttatctccg gacaacaagg tcttaaccca tatttaactt tgaacacctc tggtagtgga 2580 acaattctta tagatctgtc tcctgatgat aaagagtttc agtctgtgga ggaagagatg 2640 caaagtacag ttcgagagca cagagatgga ggtcatgcag gtggaatctt caacagatac 2700 aatattctca agattcagaa ggtttgtaac aagaaactat gggaaagata cactcaccgg 2760 agaaaagaag tttctgaaga aaaccacaac catgccaatg aacgaatgct atttcatggg 2820 tctccttttg tgaatgcaat tatccacaaa ggctttgatg aaaggcatσc gtacataggt 2880 ggtatgtttg gagctggcat ttattttgct gaaaactctt ccaaaagcaa tcaatatgta 2940 tatggaattg gaggaggtac tgggtgtcca gttcacaaag acagatcttg ttacatttgc 3000 cacaggcagc tgctcttttg ccgggtaacc ttgggaaagt ctttcctgca gttcagtgca 3060 atgaaaatgg cacattctcc tccaggtcat cactcagtca ctggtaggcc cagtgtaaat 3120 ggcctagcat tagctgaata tgttatttac agaggagaac aggcttatr-c tgagtattta 3180 attacttacc agattatgag gcctgaaggt atggtcgatg gataaatagt tattttaaga 3240 aactaattcc actgaaccta aaatcatcaa agcagcagtg gcctctacgt tttactcctt 3300 tgctgaaaaa aaatcatctt gcccacaggc ctgtggcaaa aggataaaaa tgtgaacgaa 3360 gtttaacatt ctgacttgat aaagctttaa taatgtacag 3400 SEQ ID NO: 2 Length: 1074 Type: PRT Organism: Homo sapiens Sequence: 2 lie Pro Leu His Asn Ala Cys Ser Phe Gly His Ala Glu Val Val Asn 1 5 10 15 Leu Leu Leu Arg His Gly Ala Asp Pro Asn Ala Arg Asp Asn Trp Asn 20 25 30 Tyr Thr Pro Leu His Glu Ala Ala lie Lys Gly Lys lie Asp Val Cys 35 40 45 lie Val Leu Leu Gin His Gly Ala Glu Pro Thr lie Arg Asn Thr Asp 50 55 60 Gly Arg Thr Ala Leu Asp Leu Ala Asp Pro Ser Ala Lys Ala Val Leu 65 70 75 80 Thr Gly Glu Tyr Lys Lys Asp Glu Leu Leu Glu Ser Ala Arg Ser Gly 85 90 95 Asn Glu Glu Lys Met Met Ala Leu Leu Thr Pro Leu Asn Val Asn Cys 100 105 1 L0 His Ala Ser Asp Gly Arg Lys Ser Thr Pro Leu His Leu A] a Ala Gly 115 120 125 Tyr Asn Arg Val Lys lie Val Gin Leu Leu Leu Gin His Gly Arg Asp 130 135 140 Val His Ala Lys Asp Lys Gly Asp Leu Val Pro Leu His Asn Ala Cys 145 150 155 160 Ser Tyr Gly His Tyr Glu Val Thr Glu Leu Leu Val Lys His Gly Gly 165 170 175 Cys Val Asn Ala Met Asp Leu Trp Gin Phe Thr Pro Leu His Glu Ala 180 185 190 Ala Ser Lys Asn Arg Val Glu Val Cys Ser Leu Leu Leu Ser Tyr Gly 195 200 205 Ala Asp Pro Thr Leu Leu Asn Cys Lys Asn Lys Ser Ala lie Asp Leu 210 215 220 Ala Pro Thr Pro Gin Leu Lys Glu Arg Leu Ala Tyr Glu Phe Lys Gly 225 230 235 240 His Ser Leu Leu Gin Ala A] a Arg Glu Ala Asp Val Thr Arg He Lys 245 250 255 Lys His Leu Ser Leu Glu Met Val Asn Phe Lys His Pro Gin Thr His 260 265 270 Glu Thr Ala Leu His Cys Ala Ala Ala Ser Pro Tyr Pro Lys Arg Lys 275 280 285 Gin He Cys Glu Leu Leu Leu Arg Lys Gly Ala Asn He Asn Glu Lys 290 295 300 Thr Lys Glu Phe Leu Thr Pro Leu His Val Ala Ser Glu Lys Ala His 305 310 315 320 Asn Asp Val Val Glu Val Val Val Lys His Glu Ala Lys Val Asn Ala 325 330 335 Leu Asp Asn Leu Gly Gin Thr Ser Leu His Arg Ala Ala Tyr Cys Gly 340 345 350 His Leu Gin Thr Cys Arg Leu Leu Leu Ser Tyr Gly Cys Asp Pro Asn 355 360 365 He He Ser Leu Gin Gly Phe Thr Ala Leu Gin Met Gly Asn Glu Asn 370 375 380 Val Gin Gin Leu Leu Gin Glu Gly He Ser Leu Gly Asn Ser Glu Ala 385 390 395 400 Asp Arg Gin Leu Leu Glu Ala Ala Lys Ala Gly Asp Val Glu Thr Val 405 410 415 Lys Lys Leu Cys Thr Val Gin Ser Val Asn Cys Arg Asp He Glu Gly 420 425 430 Arg Gin Ser Thr Pro Leu His Phe Ala Ala Gly Tyr Asn Arg Val Ser 435 440 445 Val Val Glu Tyr Leu Leu Gin His Gly Ala Asp Val His Ala Lys Asp 450 455 460 Lys Gly Gly Leu Val Pro Leu His Asn Ala Cys Ser Tyr Gly His Tyr 465 470 475 480 Glu Val Ala Glu Leu Leu Val Lys His Gly Ala Val Val Asn Val Ala 485 490 495 Asp Leu Trp Lys Phe Thr Pro Leu His Glu Ala Ala Ala Lys Gly Lys 500 505 510 Tyr Glu He Cys Lys Leu Leu Leu Gin His Gly Ala Asp Pro Thr Lys 515 520 525 Lys Asn Arg Asp Gly Asn Thr Pro Leu Asp Leu Val Lys Asp Gly Asp 530 535 540 Thr Asp He Gin Asp Leu Leu Arg Gly Asp Ala Ala Leu Leu Asp Ala 545 550 555 560 Ala Lys Lys Gly Cys Leu Ala Arg Val Lys Lys Leu Ser er Pro Asp 565 570 575 Asn Val Asn Cys Arg Asp Thr Gin Gly Arg His Ser Thr Pro Leu His 580 585 590 Leu Ala Ala Gly Tyr Asn Asn Leu Glu Val Ala Glu Tyr Leu Leu Gin 595 600 605 His Gly Ala Asp Val Asn Ala Gin Asp Lys Gly Gly Leu Tie Pro Leu 610 615 620 His Asn Ala Ala Ser Tyr Gly His Val Asp Val Ala Ala Leu Leu He 625 630 635 640 Lys Tyr Asn Ala Ser Leu Asn Ala Thr Asp Lys Trp Ala Phe Thr Pro 645 650 655 Leu His Glu Ala Ala Gin Lys Gly Arg Thr Gin Leu Cys Ala Leu Leu 660 665 670 Leu Ala His Gly Ala Asp Pro Thr Leu Lys Asn Gin Glu Gly Gin Thr 675 680 685 Pro Leu Asp Leu Val Ser Ala Asp Asp Val Ser Ala Leu Leu Thr Ala 690 695 700 Ala Met Pro Pro Ser Ala Leu Pro Ser Cys Tyr Lys Pro Gin Val Leu 705 710 715 720 Asn Gly Val Arg Ser Pro Gly Ala Thr Ala Asp Ala Leu Ser Ser Gly 725 730 735 Pro Ser Ser Pro Ser Ser Leu Ser Ala Ala Ser Ser Leu Asp Asn Leu 740 745 750 Ser Gly Ser Phe Ser Glu Leu Ser Ser Val Val Ser Ser Ser Gly Thr 755 760 765 Glu Gly Ala Ser Ser Leu Glu Lys Lys Glu Val Pro Gly Val Asp Phe 770 775 780 Ser He Thr Gin Phe Val Arg Asn Leu Gly Leu Glu His Leu Met Asp 785 790 795 ! 00 He Phe Glu Arg Glu Gin He Thr Leu Asp Val Leu Val Glu Met Gly 805 810 815 His Lys Glu Leu Lys Glu He Gly He Asn Ala Tyr Gly His Arg His 820 825 R30 Lys Leu He Lys Gly Val Glu Arg Leu He Ser Gly Gin Gin Gly Leu 835 840 845 Asn Pro Tyr Leu Thr Leu Asn Thr Ser Gly Ser Gly Thr He Leu He 850 855 860 Asp Leu Ser Pro Asp Asp Lys Glu Phe Gin Ser Val Glu Glu Glu Met 865 870 875 880 Gin Ser Thr Val Arg Glu His Arg Asp Gly Gly His Ala GLy Gly He 885 890 895 Phe Asn Arg Tyr Asn He Leu Lys He Gin Lys Val Cys Asn Lys Lys 900 905 P10 Leu Trp Glu Arg Tyr Thr His Arg Arg Lys Glu Val Ser Glu Glu Asn 915 920 925 His Asn His Ala Asn Glu Arg Met Leu Phe His Gly Ser Pro Phe Val 930 935 940 Asn Ala He He His Lys Gly Phe Asp Glu Arg His Ala Tyr He Gly 945 950 955 960 Gly Met Phe Gly Ala Gly He Tyr Phe Ala Glu Asn Ser Ser Lys Ser 965 970 975 Asn Gin Tyr Val Tyr Gly He Gly Gly Gly Thr Gly Cys Pro Val His 980 985 990 Lys Asp Arg Ser Cys Tyr He Cys His Arg Gin Leu Leu Phe Cys Arg 995 1000 1005 Val Thr Leu Gly Lys Ser Phe Leu Gin Phe Ser Ala Met Lys Met Ala 1010 1015 1020 His Ser Pro Pro Gly His His Ser Val Thr Gly Arg Pro Ser Val Asn 1025 1030 1035 1040 Gly Leu Ala Leu Ala Glu Tyr Val He Tyr Arg Gly Glu Gin Ala Tyr 1045 1050 1055 Pro Glu Tyr Leu He Thr Tyr Gin He Met Arg Pro Glu Gly Met Val 1060 1065 1070 Asp Gly

Claims: Claims: 1. An isolated polynucleotide molecule encoding a candidate effector protein for the Grb7 family of signalling proteins, wherein the polynucleotide molecule comprises a nucleotide sequence having at least 75% sequence identity to that shown as SEQ ID NO: 1. 2. A polynucleotide molecule according to claim 1, wherein the polynucleotide molecule comprises a nucleotide sequence having at least 85% sequence identity to that shown as SEQ ID NO: 1. 3. A polynucleotide molecule according to claim 1, wherein the polynucleotide molecule comprises a nucleotide sequence having at least 95% sequence identity to that shown as SEQ ID NO: 1. 4. A polynucleotide molecule according to claim 1, wherein the polynucleotide molecule comprises a nucleotide sequence which substantially corresponds to that shown as SEQ ID NO: 1. 5. A host cell transformed with a polynucleotide molecule according to any one of the preceding claims. 6. A host cell according to claim 5, wherein the host cell is a mammalian, insect, yeast or bacterial host cell. 7. A method of producing a protein, comprising culturing the host cell of claim 5 or 6 under conditions suitable for the expression of the polynucleotide molecule and optionally recovering the protein. 8. A purified protein encoded by a polynucleotide molecule according to any one of claims 1 to 4. 9. A purified protein according to claim 8, wherein the protein comprises an amino acid sequence substantially corresponding to that shown as SEQ ID NO: 2. 10. A fusion protein comprising an amino acid sequence substantially corresponding to that shown as SEQ ID NO: 2. 11. An antibody or fragment thereof which specifically binds to a protein according to claim 8 or 9. 12. An oligonucleotide probe comprising a nucleotide sequence of at least 12 nucleotides, the oligonucleotide probe comprising a nucleotide sequence such that the oligonucleotide probe selectively hybridises to the polynucleotide molecule of any one of claims 1 to 4 under high stringency conditions. 13. An oligonucleotide probe according to claim 12. wherein the oligonucleotide probe comprises a nucleotide sequence of at least 18 nucleotides. 14. A method of detecting in a sample the presence of an effector protein for the Grb7 family of proteins, the method comprising reacting the sample with an antibody or fragment thereof according to claim 11. 15. A method of detecting in a sample the presence of mRNA encoding an effector protein for the Grb7 family of proteins, the method comprising reacting the sample with an oligonucleotide probe of claim 12 or 13.

Inventors: DALY ROGER JOHN, SUTHERLAND ROBERT LYNDSAY, DALY, ROGER, JOHN, SUTHERLAND, ROBERT, LYNDSAY
Applicants: DALY ROGER JOHN, GARVAN INST MED RES, SUTHERLAND ROBERT LYNDSAY, DALY, ROGER, JOHN, GARVAN INSTITUTE OF MEDICAL RESEARCH, SUTHERLAND, ROBERT, LYNDSAY
Application year: 1998
Main classification: C12N15
IPC codes: C07K14, C07K16, C12N1, C12N5, C12N15, C12P21, C12Q1