CLOSTRIDIUM PERFRINGENS VACCINES

Abstract: The present invention provides novel peptides and vaccines containing them capable of inducing production of antibodies directed against Clostridium perfringens alpha-toxin (CPa) in animals to which they are administered and thereby providing prophylaxis against infection by Clostridium perfringens and/or the alpha-toxin itself. Particularly the present invention provides such a vaccine that is relatively safe and simple to produce, e.g. by genetic engineering means. Preferred peptides comprise theo amino acid sequence of Clostridium perfringens alpha-toxin from amino acid 247 to 370 but lack the epitopes necessary for phospholipase C and/or sphingomyelin hydrolysing activity found between amino acids 1 to 240 of that sequence. Further provided are antisera and antibodies raised to the peptides and vaccines of the present invention, and particularly monoclonal antibodies and hybridoma cell lines for their production.

Description: CLOSTRIDIUM PERFRINGENS VACCINES The present invention relates to novel peptides capable of illiciting an immunological response that is protective against Clostridium perfringens in man or animals; more particularly to novel peptides capable of illiciting such protective response against the alpha-toxin of that organism, and antibodies and antisera raised thereto. Preferred agents enable prophylaxis and treatment of Clostridium perfringens induced disease states in both humans and other animals. Clostridium perfringens (C. perfringens! is ubiquitous in the environment and has been found in the soil, decaying organic matter and as part of the gut flora in man and animals. Different strains of C. perfringens can be assigned to one of five biotypes (A-E) depending on the spectrum of toxins produced (McDonel (1986) Pharmacology of Bacterial Toxins; F Dorner and J Drews (Editors) Pergamon Press, Oxford). Biotype A strains are of particular importance as the etiological agents of gas gangrene in man. The disease is of increasing significance in the elderly and in diabetic populations, especially in those who have undergone lower limb surgery, where impaired blood supply to tissues can lead to anoxic conditions suitable for multiplication of the bacterium. The disease can also arise in patients who have undergone surgery of the gastrointestinal tract when contamination of damaged tissues with gut contents can result in its establishment. A more periodic increase in the incidence of gas gangrene has been shown to occur during armed conflicts when deep tissue wounds are contaminated with soil and the failure to promptly treat such injuries resulted in the death of several hundred thousand combatants during World War I. The pathogenesis of gas gangrene can be largely attributed to the production of potent exotoxins by the bacterium, of which the alpha-toxin has received attention as the major contributor to the disease. The toxin may act peripherally to the initial focus of infection by damaging and reducing the blood supply to tissues thus promoting the conditions required for spread of the infection. In the later stages of the disease the toxin may act sytemically causing death. A crude C. erfringens toxoid vaccine was demonstrated to provide protection against experimentally induced gas gangrene as long ago as 1937 ( Penfold and Tolhurst (1937) Medical Journal of Australia, pp 604) ) and subsequent studies suggested that the effective component of this vaccine was derived from the alpha-toxin ( Robertson and Keppie (1943) . Lancet 2, P3H; Boyd et al (1972) J. Med. Microbiol 5., p467; Kameyama (1975) Japanese Journal of Medicine, Science and Biology 25.. p200) . In spite of these advances a vaccine has not been developed for use in humans and current treatment for gas gangrene usually involves the removal of the affected limb or tissues. C.perfringens has also been identified, or implicated, as the causative agent of other diseases, for example in colic and enterotoxaemia, in horses, rabbit, cattle, sheep and poultry. Vaccines for use in such animals have been described in a number of prior patent applications, eg US 2654588, US 4292307, GB 2030451, SU 152943, GB 968199, GB 958575, GB 958574 and GB 985 ; all being formal toxoids or equivalents. The present inventors have previously isolated the gene encoding the alpha-toxin ( Titball et al (1989) Infection and Immunity, Vol 57, P357 _ 376) and examined structure-function relationships of the protein ( Titball and Rubidge 1990; Titball et al (1991) Infection and Immunity, Vol 59, pl872-l874). As part of these studies the location of some antibody ep topes were determined ( Logan et al (1992) Infection and Immunity, Vol 59. p4338-4382) . It is an object of the present invention to provide novel vaccines capable of inducing production of protective antibodies directed against C. perfringens alpha-toxin (CPa) when administered to animals or man and thereby providing prophylaxis against infection by C. perfringens. disease states resulting from such infection, and/or the alpha-toxin itself. It is a particular aim of the present invention to provide such a vaccine that is relatively safe and simple to produce. Antibodies and antisera so raised are also provided capable of use in therapy for at least some, if not all, disease states, where alpha toxin is essential for the organisms effect or viability. A further object of the present invention is to provide isolated vaccine peptides and conjugates capable of inducing production of antibodies to CPa such that they might also be used as tools to study the role of the alpha-toxin in the pathogenesis of gas gangrene; such vaccine peptides being free of other toxoided C. erfringens activity. In order to achieve these objects the present inventors have provided novel peptides capable of being used in such vaccines as the active immunising agent or agents. Thus in its broadest embodiment the present invention provides a peptide or peptide conjugate comprising the amino acid sequence of epitopes of C. perfringens alpha-toxin from amino acid 261 to 300 but lacking epitopes/ amino acid sequences necessary for phospholipase C and/or sphingomyelin hydrolysing activity that are found between amino acids 1 to 240 of the alpha-toxin; said peptide being capable of inducing an immune response protective against the alpha-toxin when administered to humans or animals. Titball et al (1991) broadly describes the unwanted regions. Preferably the peptides of the present invention comprise the amino acid sequence of C. perfringens alpha-toxin from amino acid 261 to amino acid 370; most preferably from 2^7 to 370. Particularly provided are such peptides as derived from C. perfringens Biotype A alphatoxin DNA. In a most preferred form the peptides of the present invention consist of only amino acid 247 to amino acid 370 of the amino acid sequence of C. perfringens alpha-toxin or that amino acid sequence in the form of a fusion peptide with another amino acid sequence, that not being that of amino acid 1 to amino acid 246 of the alpha-toxin, or in the form of a conjugate with an agent having other desired effect. The term 'other amino acid sequence* will be understood by the person skilled in the art to include complete proteins as well as relatively short sequences as appropriate to the needs of the user. For example a non-C. perfringens antigenic protein may be included fused to the aforesaid sequence for the purpose of providing other immunity or labelling. In a further embodiment the present invention provides vaccine compositions comprising suitable doses of the peptides or conjugates of the present invention, these being optionally complemented as necessary by further agents for optimising protection, eg. adjuvants and carriers. Some such suitable agents will be those as disclosed in the patents referred to on page 2. Freunds incomplete or complete adjuvant may be used as typical adjuvants, but other suitable candidates such as those described in WO 9203164 will occur to those skilled in the art. Carrier function may be fulfilled merely by saline solutions. The present inventors and coworkers have determined that the neither the N-terminal (amino acids l-249=Cpa 2ή9 ) nor C-terminal (amino acids 250-370) domains are capable of lethal effect on their own. This is surprising in the light of findings that the phospholipase activity was found to be entirely present in the N- erminal domain while known sphingomyelinase related epitopes were found to be lacking in the sequence of the C-terminal domain. Further experimentation by these workers has showed that the N-terminal domain on its own is not capable of inducing a protective response in spite of the fact that antibodies directed at these N-terminal domain epitopes can neutralise the effects of the toxin. Thus it may readily be seen that the finding that the relatively inactive C-terminal domain can illicit a protective response where the relatively active N-terminal cannot is an entirely surprising result. The positions of C-terminal epitopes have been mapped previously by the present inventors and their coworkers and found to lie at approximately position 273*275 and 295"297 in the alpha-toxin amino acid sequence. It is to be expected that the position or nature of these epitopes might vary slightly from isolate to isolate while maintaining functional activity and thus such variation are included in the scope of the invention where a protective response is retained. It will be clear to a worker skilled in the art from the aforesaid disclosure that certain sequences within the C-terminal domain will be far more effective than others in providing the necessary immunogenic activity. This is because the protective effect is typically somewhat dependent upon the tertiary arrangement of the peptide in orienting the epitopes of interest to each other. This is further evidenced by the fact that the active epitope holding N-terminal domain is not lethal on its own, indicating that the C-terminal is necessary for correct orientation of these epitopes also. It is also clear that given the information herein the skilled worker will be able to screen the various sequences of the invention for necessary activity and that these various sequences may readily be provided using standard genetic engineering techniques such as polymerase chain reaction and gene cloning to provide sequences lacking the unwanted phospholipase and sphingomyelitical activity. These 'unwanted' regions are described in detail in papers by the present authors and coworkers (Shuttleworth et al (1988) 'Epitope mapping of Clostridium perfringens alpha-toxin' in F J Fehrenbach et al (Editors) bacterial Protein Toxins, Gustav Fischer Verlag, Stuttgart, p 65-66. Titball et al (1989) Infection and Immunity, Vol 57, p357~376; Titball et al (1991) Infection and Immunity, Vol 59. 5. pl872-l874; Logan et al (1991) Infection and Immunity, Vol 59. 12, P 4338-4382). In further aspects of the present invention there is provided recombinant DNA encoding for the peptides of the invention, plasmids comprising such DNA and cell lines comprising these plasmids or the recombinant DNA itself such that expression of the peptides may be achieved. Such recombinant DNA is conveniently provided by PCR amplification of the DNA encoding for the desired sequence, eg. Cpa 2)7 _ 370 or Cpa 26l _ 3 , using primers targeted at respective ends of the double stranded sequence of which it forms one half. Alternatively suitable restriction enzymes might be used on larger quantities of native alpha-toxin encoding DNA. The derived DNA is ligated into a suitable vector, optionally contiguously running with a sequence comprising the remainder of a desired fusion peptide, and the vector inserted into a suitable host cell eg. such as E. coli. A desired peptide expressing cell line may be selected in the known way, eg. by Western Blotting using antibodies directed at the peptide, alpha toxin or a conjugated peptide such as GST. It should be noted that selection of certain fusion peptides may facilitate isolation of the peptide by provision of a relatively large fraction which can be cleaved to yield the alpha-toxin related peptide after initial purification. In a further aspect of the present invention there are provided antisera raised to the peptides of the invention and antibodies derived therefrom. Furthermore, the present invention provides monoclonal antibodies to the peptides of the invention and hybridoma cells for production thereof. The antisera of the invention are readily prepared by injecting a host animal (eg.a mouse, pig or rabbit) with a peptide of the invention and then isolating serum from it after a waiting suitable period for antibody production, eg. 14 to 28 days. Antibodies may be isolated from the blood of the animal or its sera by use of any suitable known method, eg. by affinity chromatography using immobilised peptides of the invention or the peptides they are conjugated to, eg. GST, to retain the antibodies. Similarly monoclonal antibodies may be readily prepared using known procedures to produce hybridoma cell lines expressing antibodies to peptides of the invention. Such monoclonals antibodies may also be humanised eg. using further known procedures which incorporate mouse monoclonal antibody light chains from antibodies raised to the peptides of the present invention with human antibody heavy chains. In order to assist the skilled worker there are now provided Figures and illustrative examples of peptides and peptide vaccines of the present invention. These are intended as non-limiting examples for provision of data regarding the efficacy of the basic C-terminal domain peptides from which skilled workers may draw their own conclusions regarding possible variations within the scope of the invention. FIGURES. Figure 1: shows the relative positions of major epitopes mapped on the complete alpha-toxin sequence (Cpa 1 _ 370 ) = A; a C-terminal domain peptide of the invention (Cpa 2(7 _ 370 ) = B and a fusion peptide of the invention (GST-Cpa 2ή7 _ 370 ) = C. Numbers indicate the approximate positions of the epitope. Figure 2: shows the log 10 antibody titre v days after initial injection (i.p.) with test vaccines. Booster injections are indicated by anotation ~ on the x plot. Titres are independent of protection. 0=alphatoxin; Square=GST; Triangles-open=Cpa 2/|7 _ 370 ; -closed=Cpa 247 . 370 GST. SEQUENCE LISTING: SEQ ID No 1: is the complete DNA sequence coding for the C.perfringens alpha-toxin; this being one strand of the double stranded sequence. SEQ ID No 2: is the amino acid sequence of alpha-toxin encoded by SEQ ID No 1. SEQ ID No 3: s the DNA sequence coding for Cpa 2(7 _ 370 ; the preferred peptide of the invention that has been identified herein. SEQ ID No 4: is the amino acid sequence of Cpa 2ή7 _ 370 - EXAMPLES. Example 1: Generation of C-terminal (Cpa247-370) peptide of alpha-toxin of C. perfringens and its conjugates. All chemicals were obtained from BDH Chemical Company or the Sigma Chemical Company unless otherwise stated. Vaccine peptide against the alpha-toxin of C. perfringens was generated by expressing, in Escherichia coli. a fragment of the alpha-toxin gene which would encode the C-terminal domain of the alpha-toxin (amino acids 247-370 = c P a 24 7 - 37 o) • The fragment of the alpha-toxin gene was generated by polymerase chain reaction (PCR) amplification of the region between nucleotides 823 and 1194 of the alpha-toxin gene sequence previously reported by Titball et al. Oligonucleotides (30-mers) were designed from the nucleotide sequence of the alpha-toxin gene (Cpa) of C. perfringens NCTC 8237 (see Titball et al (1989) Infect. Immun. 51, 367~376) synthesised on a Biosystems 392 DNA Synthesiser with 6 additional nucleotides at the 5' ends containing restriction endonuclease sites; the PCR primer homologous with the region starting at nucleotide 823 incorported a nucleotide tail ( GGG ATG ) to facilitate cloning and expression of the gene fragment. The NCTC 8237 Cpa was cloned into a plasmid (as Titball ; ibid) linearised and used as template DNA (4θng) in the PCR. A DNA fragment encoding the Cpa^., ,.— was produced as product after 20 amplification cycles (LEP Prem thermal cycler) purified by agarose gel electrophoresis and digested with Smal and Hindlll, The purified fragment was ligated with Smal-Hindlll digested pBluescript SK+ (Stratagene) and transformed into E. coli JM109 cells (see method Hanahan (1985) DNA cloning; a practical approach Vol 1 (Glover Ed) pp 109-135, IB Press, Oxford) . The verification of the authenticity of the nucleotide sequence of the cloned fragment was carried out using routine methods ( Maniatis et al, 19δ9« Molecular cloning:a laboratory manual. Cold Spring Harbor Laboratory Press.). A recombinant plasmid was generated (pCTHl) for the sequencing and cloning work. Expression was achieved by isolating the Cpa 247 _ 370 encoding fragment ( Smal - Hind III fragment ) from the pBluescript clone using Smal and Hindlll, purifying it, blunt ending the Hindlll site using Klenow fragment (Sambrook et al: Molecular Cloning-as above) and ligating this fragment with Smal digested pGEX~3X expression vector DNA ( LKB-Pharmacia Biotechnology ) . The resultant recombinant plasmid expressed Cpa 24 _ 370 as a fusion protein with the vector encoded glutathione-S-transferase ( = GST-Cpa.-, A7 _ 370 ) when transformed intgo . E. coli JM 109 (as Hanahan-above) . Transformants were screened using PCR and a colony isolated containing the plasmid pGEX3~13 (also called pB3X13) • Expressed protein was then purified according to the procedure suggested by the plasmid manufacturers for the purification of GST. Nucleotide sequencing was carried out by generating single stranded DNA from cells containing pCTHl by co-infecting the cells with the helper bacteriophage M13K07 (see Sambrook-Molecular cloning-as above) wherein single stranded DNA is purified and used for dideoxy -termination sequencing reactions using alpha 35 S-dCTP and the reaction products are separated by electrophoresis and visualised by autoradiography. Expression and purification of GST-Cpa 247 _ 370 and Cpa 2ή7 _ 370 : Protocol 1: E. coli containing the plasmid pGEX3X-13 was cultured in 10 x 100ml volumes of BHI broth in 250ml Erlenmeyer flasks at 37°C with shaking at 150rpm. Fusion protein expression, expressed from the tac promoter, was induced by addition of IPTG (ImM final concentration) to cultures that had reached an 0D 6θ0 of 0.6. After a further 5 hours of growth the cells were harvested by centrifugation and resuspended in 3m of phosphate buffered saline (PBS. Oxoid) , lysozyme solution (8θμl, lOmg/ml) was added to the suspension and, after incubation (lOmin, 22°C) 30μl of Triton X-100 was added. The cell suspension was frozen (-20°C) , thawed and sonicated for 12 x 30 seconds (Braun Sonicator, Maximum power, 25mm probe) on ice. After centrifugation (10,000 x g, 4°C) the supernatant was mixed with 2ml of glutathione-sepharose gel (Pharamacia) previously washed three times with PBS + 0.1J. Triton X-100. The mixture was stirred for 18 hours at ^"C, packed into a chromatography column and the column washed with 20ml PBS + 0.1JI. Triton X-100 followed by 10ml tris buffer (lOmM, pH to 8.0 with HC1) containing __.ΏM reduced glutathione. Fractions collected (2ml) were analysed for the presence of fusion protein by SDS-polyacrylamide gel electrophoresis (Pharmacia Phast System, 10-15?- gradient gels) and staining with Coomasie Blue R250. To generate Cpa^ ,.^ the GST-Cpa^,--..^ fusion protein (2mg) was cleaved for lβhours (22°C) with factor X (BCL; 30μg) according to the manufacturer's datasheet. The mixture was applied to a 1ml minicolumn of glutathione sepharose and the column eluted with 3ωl PBS. Fractions (1ml) were analysed for Cpa 2ή7 _ 370 as described above and SDS-poly -acrylamide gel analysis showed that pure Cpa 247 _ 370 was obtained. Protocol 2: E.coli containing pGEX3X-13 was cultured in 1 litre of L-broth + ampicillin at 37°C, 150 rpm until the optical density of the respective culture (600nm ) was approximately 0.3. IPTG was added to a final concentration of ImM and the culture grown for a further 4 hrs. A total cell lysate was prepared by resuspending the cells in 30ml PBS + triton xlOO ( 1% ) and sonicated for 5 x 30seconds on ice using a Braun Labsonic sonicator. The supernatant obtained after centrifugation was purified by selective elution from a column of glutathione-sepharose ( LKB-Pharmacia ) . For isolation of the Cpa 247 _ 370 fragment alone the GST-Cpa-, 4 3?0 peptide ( approx lOmg in 800μl ) was digested with factor X, ( 15U ) overnight at room temperature, and the Cpa^,^ fragment separated from the GST by passage through a glutathione-sepharose column. Immunological properties of CD^^-..: To establish whether isolated and purified C-terminal domain of Cpa 247 _ 370 was immunologically similar to that region of the complete alpha-toxin, it was used as an immunogen in mice, see below, and the resulting antiserum reacted with overlapping peptides derived from primary amino acid sequence in the C-terminal domain of the toxin. The results indicated that the pattern of reactivity did not differ from that obtained when antiserum to the whole toxin was reacted with these peptides (see method Logan et al (1991) Infect. Immun. 5S- 4338-4342, suggesting that no new and significant sequential antibody binding regions were created and that correct folding and structure identity with the C-terminal in the complete toxin was present. Biochemical properties of Cpa 247 :)70 . Purified Cpa^^.^ was tested in a number of enzyme assays wherein it was determined that it lacked sphingomyelinase activity and did not cause haemolysis of mouse erythrocytes, as distinct from the complete toxin which exhibits these. As the folding has been shown to be the same it is considered that no coding for this activity is present. Cellular effects: While 1.25μg/ml alpha-toxin is toxic for mouse lymphocytes, rising to a dose response maxima at 2.5ug/ml tissue culture volume and after 20 hours, neither Cpa 1 _ 24g nor Cpa 247 _ 370 were toxic at these concentrations; Cpa 2ή? ,„ not being toxic in lOμg injections to mice whereas lμg alpha-toxin causes death within in 24 hours. However, when Cpa^^. and Cpa^.. ,-., were used together haemolyis of lymphocytes occured, but not when used sequentially. As B. cereus PC-PCL 1 _ 2tg and Cpa '2,47-370 do not have this effect it would appear that the two Cpa truncates interact to provide the enzymic effects. Cpa=alpha-toxin; Cpa 247 _ 3 =preferred truncate of the invention a=p-nitrophenolphosphorylcholine(pNPPC) hydrolysing activity 1U catalysed hydrolysis of 1 nmol of substrate. b=N-omega-trinitrophenyllaurylsphingosylphosphorylcholine (TNPAL) hydrolysing activity. 1U catalysed hydrolysis of 1 nmol substrate c=Hydrolysis of bovine brain or erythrocyte or chicken egg yolk sphingomyelin assessed by TLC. d=Haemolytic activity. 1 Haemolytic unit (Hu) caused 5 ~ % lysis of lOOμl of a 5% v/v mouse erythrocyte suspension. Toxicitv of candidate vaccines: Barrier-bred female 6-week old Balb/cmice, free of mouse pathogens, were obtained from Charles River Laboratories, Margate, Kent UK, and wre used throughout these studies. The toxicity of the vaccine fusion peptide was determined by intra -peritoneal inoculation of lOμg amounts into a groups of 6 mice. The vaccine was non-lethal at these doses and mice showed no signs of acute or chronic toxicity for up to two weeks post inoculation. Antibody responses to vaccines: The candidate vaccines were administered to groups of 6 mice by intra -peritoneal inoculation with adjuvant (Incomplete Freunds Adjuvant-IFA) . The appearance of antibody against the alpha-toxin was monitored by ELISA. Cpa 247 _ 370 or GST-Cpa^- 370 induced a strong antibody response against the alpha-toxin which increased after booster inoculations ( Fig 2 ) . The alpha-toxin antibody response against Cpa 247 _ 370 was not affected by the fusion of this polypeptide with glutathione-S- -transferase. The magnitude of the antibody response against Cpa^. (N-terminal domain) , Cpa^,^ or GST-Cpa 2/I7 _ 370 was similar to that observed when a crude formaldehyde alpha-toxoid was administered. Properties of antibodies raised against vaccines: The ability of serum from animals immunised with Cpa^g, Cpa^,, 370 or GST-Cpa 2|7 _ 3 0 to neutralise, in vitro, biological activities associated with the alpha-toxin was investigated. All effectively inhibited the phospholipase C activity of the toxin; however only antiserum generated against Cpa 247 _ 370 or GSTCpa-,^ , ^ inhibited the haemolytic activity of the toxin. Protection against toxin challenge. Animals which were immunised with formol-toxoid, Cpa 24g , Cpa 24 _ 370 , GST-Cpa 247 _ 370 or GST alone were challenged intraperitonally with 5μg of purified alpha-toxin ( approximately 50 LD 0 doses ) . Control mice and mice immunised with GST died within 24hr and 4 of 6 mice immunised with Cpa 2i| „ died during this time. Mice immunised with the formol -toxoid, Cpa 2it7 _ 370 or GST-Cpa 247 _ 370 survived and showed no signs of intoxication. Protection against organism challenge: To investigate the possibility that the formol-toxoid, Cpa 2(7 _ 370 or GST-Cpa 2(7 _ 370 could also induce protection against experimental gas-gangrene, groups of six mice, which had been immunised with these candidate vaccines, were challenged intramuscularly with 10 10 viable cells of C.perfringens NCTC 8237- All of the immunised animals survived this challenge whereas 3/6 control animals which had not been immunised died with 48hrs. TABLE 2: Protection against challenge with alpha-toxin afforded by immunisation with candidate vaccines. Groups of six Balb/C mice received 6 x lOμg intraperitoneal doses of antigen mixed with Freunds incomplete adjuvant over a period of 80 days. The mice were challenged intraperitoneally with lOμg of purified alpha-toxin and deaths recorded up to 24hr. Conclusions: The most easily genetically engineered vaccine generated during this study, Cpa 2ή7 _ 370 represents the C-terminal domain of the alpha-toxin. This protein appears to be non-toxic in the mouse in doses up to lOμg. The repeated inoculation of mice with this protein induced a strong antibody response which protects animals against the alpha-toxin and against challenge with C.perfringens. This vaccine offers several potential advantages over the formol-toxoid: it is much more easily prepared and because it is free from formaldehyde, other toxoided C.perfringens toxins and partially toxoided materials it is inherently safer for vaccine application and less reactogenic. COMPARATIVE EXAMPLES: A number of other vaccine candidates were prepared that encompassed a region of the alpha toxin recognised by a phospholipase-C neutralising antibody (this region being Cpa ιg3 _ ιg8 ) with additional regions that might be required for correct presentation of this region, using models to ensure that complete helices would be included. A BamHl-Hindlll fragment from Cpa encoding a 20.5 kDalton (kDa) fragment of the protein containing six predicted helices was expressed as a cro-β-galactosidase (cro-β-gal-Cpa gg _ 2ήg ) . A plasmid was also constructed encoding a 9 kDa fragment containing three predicted helices (cro-β-gal-Cpa 17g _ 2|g ) . All were purified and this checked by SDS-PAGE. All proteins reacted with antibodies raised to neutralise the phospholipase C activity, but cro-β-galactosidase alone did not. Neither of the Cpa gg _ 2ήg nor Cpa 17g _ 24g produced a measurable antitoxin titre. Cpa 24g gave similar titre to the formol toxoid yet failed to prevent haemolytic activity in vitro and all alpha-toxin challenged animals died in in vivo tests. Only the formol toxoid and Cpa 2i ._ 3 0 peptide family immunised animals survived. It should be noted that the unconjugated peptide gave superior protection to GST-conjugate when 10 9 viable C.perfringens cells were injected intramuscularly in lOOμl saline. SEQUENCE LISTING 1) GENERAL INFORMATION: (i) APPLICANT: (A) NAME: THE SECRETARY OF STATE FOR DEFENCE IN HER BRITANNIC MAJESTY, (B) STREET: WHITEHALL (C) CITY: LONDON (E) COUNTRY: UNITED KINGDOM (F) POSTAL CODE (ZIP): SW1A 2HB (A) NAME: RICHARD WILLIAM TITBALL (B) STREET: CBDE PORTON DOWN (C) CITY: SALISBURY (D) STATE: WILTSHIRE (E) COUNTRY: UNITED KINGDOM (F) POSTAL CODE (ZIP): SP4 OJQ (A) NAME: ETHEL DIANE WILLIAMSON (B) STREET: CBDE PORTON DOWN (C) CITY: SALISBURY (D) STATE: WILTSHIRE (E) COUNTRY: UNITED KINGDOM (F) POSTAL CODE (ZIP) : SP4 OJQ (ii) TITLE OF INVENTION: CLOSTRIDIUM PERFRINGENS VACCINES (iii) NUMBER OF SEQUENCES: 4 (iv) COMPUTER READABLE FORM: (A) MEDIUM TYPE: Floppy disk (B) COMPUTER: IBM PC compatible (C) OPERATING SYSTEM: PC-DOS/MS-DOS (D) SOFTWARE: PatentIn Release £1.0, Version £1.25 (EPO) (vi) PRIOR APPLICATION DATA: (A) APPLICATION NUMBER: GB 9210717-6 (B) FILING DATE: 20-MAY-1992 (vi) PRIOR APPLICATION DATA: (A) APPLICATION NUMBER: GB 9215655-3 (B) FILING DATE: 23-JUL-1992 INFORMATION FOR SEQ ID NO: 1: (i) SEQUENCE CHARACTERISTICS: (A) LENGTH: 1113 base pairs (B) TYPE: nucleic acid (C) STRANDEDNESS: double (D) TOPOLOGY: linear (ii) MOLECULE TYPE: DNA (genomic) (iii) HYPOTHETICAL: NO (iii) ANTI-SENSE: NO SUBSTITUTE SHEET (v) FRAGMENT TYPE: C-terminal (vi) ORIGINAL SOURCE: (A) ORGANISM: Clostridium perfringens (ix) FEATURE: (A) NAME/KEY: CDS (B) LOCATION: 1..1110 (ix) FEATURE: (A) NAME/KEY: CDS (B) LOCATION: 736..1110 (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 1: TGG GAT GGA AAG ATT GAT GGA ACA GGA ACT CAT GCT ATG ATT GTA ACT 48 Trp Asp Gly Lys lie Asp Gly Thr Gly Thr His Ala Met lie Val Thr 1 10 15 CAA GGG GTT TCA ATC TTA GAA AAT GAT CTG TCC AAA AAT GAA CCA GAA 96 Gin Gly Val Ser lie Leu Glu Asn Asp Leu Ser Lys Asn Glu Pro Glu 20 25 30 AGT GTA AGA AAA AAC TTA GAG ATT TTA AAA GAG AAC ATG CAT GAG CTT 144 Ser Val Arg Lys Asn Leu Glu lie Leu Lys Glu Asn Met His Glu Leu 35 0 45 CAA TTA GGT TCT ACT TAT CCA GAT TAT GAT AAG AAT GCA TAT GAT CTA 192 Gin Leu Gly Ser Thr Tyr Pro Asp Tyr Asp Lys Asn Ala Tyr Asp Leu 50 55 60 TAT CAA GAT CAT TTC TGG GAT CCT GAT ACA GAT AAT AAT TTC TCA AAG 240 Tyr Gin Asp His Phe Trp Asp Pro Asp Thr Asp Asn Asn Phe Ser Lys 65 70 75 80 GAT AAT AGT TGG TAT TTA GCT TAT TCT ATA CCT GAC ACA GGG GAA TCA 288 Asp Asn Ser Trp Tyr Leu Ala Tyr Ser lie Pro Asp Thr Gly Glu Ser 85 90 95 CAA ATA AGA AAA TTT TCA GCA TTA GCT AGA TAT GAA TGG CAA AGA GGA 336 Gin He Arg Lys Phe Ser Ala Leu Ala Arg Tyr Glu Trp Gin Arg Gly 100 105 no AAC TAT AAA CAA GCT ACA TTC TAT CTT GGA GAG GCT ATG CAC TAT TTT 384 Asn Tyr Lys Gin Ala Thr Phe Tyr Leu Gly Glu Ala Met His Tyr Phe 115 120 125 GGA GAT ATA GAT ACT CCA TAT CAT CCT GCT AAT GTT ACT GCC GTT GAT 432 Gly Asp He Asp Thr Pro Tyr His Pro Ala Asn Val Thr Ala Val Asp 130 135 140 AGC GCA GGA CAT GTT AAG TTT GAG ACT TTT GCA GAG GAA AGA AAA GAA 480 Ser Ala Gly His Val Lys Phe Glu Thr Phe Ala Glu Glu Arg Lys Glu 45 150 155 160 CAG TAT AAA ATA AAC ACA GCA GGT TGC AAA ACT AAT GAG GCT TTT TAT 528 Gin Tyr Lys He Asn Thr Ala Gly Cys Lys Thr Asn Glu Ala Phe Tyr 165 170 175 SUBSTITUTE SHE ACT GAT ATC TTA AAA AAC AAA GAT TTT AAT GCA TGG TCA AAA GAA TAT 76 Thr Asp He Leu Lys Asn Lys Asp Phe Asn Ala Trp Ser Lys Glu Tyr 180 185 190 GCA AGA GGT TTT GCT AAA ACA GGA AAA TCA ATA TAC TAT AGT CAT GCT 624 Ala Arg Gly Phe Ala Lys Thr Gly Lys Ser He Tyr Tyr Ser His Ala 195 200 205 AGC ATG AGT CAT AGT TGG GAT GAT TGG GAT TAT GCA GCA AAG GTA ACT 67 Ser Met Ser His Ser Trp Asp Asp Trp Asp Tyr Ala Ala Lys Val Thr 210 215 220 TTA GCT AAC TCT CAA AAA GGA ACA GCG GGA TAT ATT TAT AGA TTC TTA 720 Leu Ala Asn Ser Gin Lys Gly Thr Ala Gly Tyr He Tyr Arg Phe Leu 225 30 235 240 CAC GAT GTA TCA GAG GGT AAT GAT CCA TCA GTT GGA AAG AAT GTA AAA 768 His Asp Val Ser Glu Gly Asn Asp Pro Ser Val Gly Lys Asn Val Lys 245 250 255 GAA CTA GTA GCT TAC ATA TCA ACT AGT GGT GAG AAA GAT GCT GGA ACA 8l6 Glu Leu Val Ala Tyr He Ser Thr Ser Gly Glu Lys Asp Ala Gly Thr 260 265 270 GAT GAC TAC ATG TAT TTT GGA ATC AAA ACA AAG GAT GGA AAA ACT CAA 864 Asp Asp Tyr Met Tyr Phe Gly He Lys Thr Lys Asp Gly Lys Thr Gin 275 280 285 GAA TGG GAA ATG GAC AAC CCA GGA AAT GAT TTT ATG ACT GGA AGT AAA 912 Glu Trp Glu Met Asp Asn Pro Gly Asn Asp Phe Met Thr Gly Ser Lys 290 295 300 GAC ACT TAT ACT TTC AAA TTA AAA GAT GAA AAT CTA AAA ATT GAT GAT 96O Asp Thr Tyr Thr Phe Lys Leu Lys Asp Glu Asn Leu Lys He Asp Asp 305 310 315 320 ATA CAA AAT ATG TGG ATT AGA AAA AGA AAA TAT ACA GCA TTC TCA GAT 1008 He Gin Asn Met Trp He Arg Lys Arg Lys Tyr Thr Ala Phe Ser Asp 325 330 335 GCT TAT AAG CCA GAA AAC ATA AAG ATA ATA GCA AAT GGA AAA GTT GTA 1056 Ala Tyr Lys Pro Glu Asn He Lys He He Ala Asn Gly Lys Val Val 340 3^5 350 GTG GAC AAA GAT ATA AAC GAG TGG ATT TCA GGA AAT TCA ACT TAT AAT 1104 Val Asp Lys Asp He Asn Glu Trp He Ser Gly Asn Ser Thr Tyr Asn 355 360 365 ATA AAA TAA 1113 He Lys 370 (2) INFORMATION FOR SEQ ID NO: 2: (i) SEQUENCE CHARACTERISTICS: (A) LENGTH: 370 amino acids (B) TYPE: amino acid (D) TOPOLOGY: linear SUBSTITUTE SHEET (ii) MOLECULE TYPE: protein (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 2: Trp Asp Gly Lys He Asp Gly Thr Gly Thr His Ala Met He Val Thr 1 10 15 Gin Gly Val Ser He Leu Glu Asn Asp Leu Ser Lys Asn Glu Pro Glu 20 2 30 Ser Val Arg Lys Asn Leu Glu He Leu Lys Glu Asn Met His Glu Leu 35 40 45 Gin Leu Gly Ser Thr Tyr Pro Asp Tyr Asp Lys Asn Ala Tyr Asp Leu 50 55 60 Tyr Gin Asp His Phe Trp Asp Pro Asp Thr Asp Asn Asn Phe Ser Lys 65 70 75 80 Asp Asn Ser Trp Tyr Leu Ala Tyr Ser He Pro Asp Thr Gly Glu Ser 85 90 95 Gin He Arg Lys Phe Ser Ala Leu Ala Arg Tyr Glu Trp Gin Arg Gly 100 105 no Asn Tyr Lys Gin Ala Thr Phe Tyr Leu Gly Glu Ala Met His Tyr Phe 115 120 125 Gly Asp He Asp Thr Pro Tyr His Pro Ala Asn Val Thr Ala Val Asp 130 135 140 Ser Ala Gly His Val Lys Phe Glu Thr Phe Ala Glu Glu Arg Lys Glu 145 150 155 160 Gin Tyr Lys He Asn Thr Ala Gly Cys Lys Thr Asn Glu Ala Phe Tyr 165 170 175 Thr Asp He Leu Lys Asn Lys Asp Phe Asn Ala Trp Ser Lys Glu Tyr 180 185 190 Ala Arg Gly Phe Ala Lys Thr Gly Lys Ser He Tyr Tyr Ser His Ala 195 200 205 Ser Met Ser His Ser Trp Asp Asp Trp Asp Tyr Ala Ala Lys Val Thr 210 215 220 Leu Ala Asn Ser Gin Lys Gly Thr Ala Gly Tyr He Tyr Arg Phe Leu 225 230 235 240 His Asp Val Ser Glu Gly Asn Asp Pro Ser Val Gly Lys Asn Val Lys 245 250 255 Glu Leu Val Ala Tyr He Ser Thr Ser Gly Glu Lys Asp Ala Gly Thr 260 265 270 Asp Asp Tyr Met Tyr Phe Gly He Lys Thr Lys Asp Gly Lys Thr Gin 275 280 285 Glu Trp Glu Met Asp Asn Pro Gly Asn Asp Phe Met Thr Gly Ser Lys 290 295 300 SUBSTITUTE SHEET Asp Thr Tyr Thr Phe Lys Leu Lys Asp Glu Asn Leu Lys He Asp Asp 305 310 315 320 He Gin Asn Met Trp He Arg Lys Arg Lys Tyr Thr Ala Phe Ser Asp 325 330 335 Ala Tyr Lys Pro Glu Asn He Lys He He Ala Asn Gly Lys Val Val 340 345 350 Val Asp Lys Asp He Asn Glu Trp He Ser Gly Asn Ser Thr Tyr Asn 355 360 365 He Lys 370 (2) INFORMATION FOR SEQ ID NO: 3: (i) SEQUENCE CHARACTERISTICS: (A) LENGTH: 375 base pairs (B) TYPE: nucleic acid (C) STRANDEDNESS: double (D) TOPOLOGY: linear (ii) MOLECULE TYPE: DNA (genomic) (iii) HYPOTHETICAL: NO (iii) ANTI-SENSE: NO (v) FRAGMENT TYPE: C-terminal (vi) ORIGINAL SOURCE: (A) ORGANISM: Clostridium perfringens (ix) FEATURE: (A) NAME/KEY: CDS (B) LOCATION: 1.-375 (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 3: AAT GAT CCA TCA GTT GGA AAG AAT GTA AAA GAA CTA GTA GCT TAC ATA 48 Asn Asp Pro Ser Val Gly Lys Asn Val Lys Glu Leu Val Ala Tyr He 1 10 15 TCA ACT AGT GGT GAG AAA GAT GCT GGA ACA GAT GAC TAC ATG TAT TTT 96 Ser Thr Ser Gly Glu Lys Asp Ala Gly Thr Asp Asp Tyr Met Tyr Phe 20 25 30 GGA ATC AAA ACA AAG GAT GGA AAA ACT CAA GAA TGG GAA ATG GAC AAC 144 Gly He Lys Thr Lys Asp Gly Lys Thr Gin Glu Trp Glu Met Asp Asn 35 40 45 CCA GGA AAT GAT TTT ATG ACT GGA AGT AAA GAC ACT TAT ACT TTC AAA 192 Pro Gly Asn Asp Phe Met Thr Gly Ser Lys Asp Thr Tyr Thr Phe Lys 50 55 60 TTA AAA GAT GAA AAT CTA AAA ATT GAT GAT ATA CAA AAT ATG TGG ATT 240 Leu Lys Asp Glu Asn Leu Lys He Asp Asp He Gin Asn Met Trp He SUBSTITUTE SHEET 65 70 75 80 AGA AAA AGA AAA TAT ACA GCA TTC TCA GAT GCT TAT AAG CCA GAA AAC 288 Arg Lys Arg Lys Tyr Thr Ala Phe Ser Asp Ala Tyr Lys Pro Glu Asn 85 90 95 ATA AAG ATA ATA GCA AAT GGA AAA GTT GTA GTG GAC AAA GAT ATA AAC 336 He Lys He He Ala Asn Gly Lys Val Val Val Asp Lys Asp He Asn 100 105 no GAG TGG ATT TCA GGA AAT TCA ACT TAT AAT ATA AAA TA 375 Glu Trp He Ser Gly Asn Ser Thr Tyr Asn He Lys 115 120 125 (2) INFORMATION FOR SEQ ID NO: 4: (i) SEQUENCE CHARACTERISTICS: (A) LENGTH: 124 amino acids (B) TYPE: amino acid (D) TOPOLOGY: linear (ii) MOLECULE TYPE: protein (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 4: Asn Asp Pro Ser Val Gly Lys Asn Val Lys Glu Leu Val Ala Tyr He 1 5 10 15 Ser Thr Ser Gly Glu Lys Asp Ala Gly Thr Asp Asp Tyr Met Tyr Phe 20 25 30 Gly He Lys Thr Lys Asp Gly Lys Thr Gin Glu Trp Glu Met Asp Asn 35 40 45 Pro Gly Asn Asp Phe Met Thr Gly Ser Lys Asp Thr Tyr Thr Phe Lys 50 55 60 Leu Lys Asp Glu Asn Leu Lys He Asp Asp He Gin Asn Met Trp He 65 70 75 80 Arg Lys Arg Lys Tyr Thr Ala Phe Ser Asp Ala Tyr Lys Pro Glu Asn 85 90 95 He Lys He He Ala Asn Gly Lys Val Val Val Asp Lys Asp He Asn 100 105 HO Glu Trp He Ser Gly Asn Ser Thr Tyr Asn He Lys 115 120 SUBSTITUTE SHEET

Claims: CLAIMS 1. A peptide or peptide conjugate comprising the amino acid sequence of epitopes of Clostridium perfringens alpha-toxin from amino acid 261 to amino acid 300 but lacking phospholipase C and/or sphingomyelin hydrolysing activity; said peptide being capable of inducing an immune response protective against the alpha-toxin when administered to humans or animals. 2. A peptide or peptide conjugate as claimed in claim 1 comprising the amino acid sequence of epitopes of Clostridium perfringens alpha-toxin from amino acid 26l to amino acid 300 but lacking the epitopes or other sequences necessary for phospholipase C and/or sphingomyelin hydrolysing activity found between amino acids 1 to 240 of the alpha- oxin; said peptide being capable of inducing an immune response protective against the alpha-toxin when administered to humans or animals. 3. A peptide or peptide conjugate as claimed in claim 1 or 2 comprising the amino acid sequence of Clostridium perfringens alpha-toxin from amino acid 261 to amino acid 370. 4. A peptide or peptide conjugate as claimed in claim 3 comprising the amino acid sequence of Clostridium perfringens alpha-toxin from amino acid 247 to amino acid 370. 5. A peptide consisting of amino acid 247 to amino acid 370 of the amino acid sequence of Clostridium perfringens alpha-toxin or that amino acid sequence in the form of a fusion peptide with another amino acid sequence, or in the form of a conjugate with an agent having other desired effect, provided that when it is in the form of a conjugate with another peptide that is not of the sequence of amino acid 1 to amino acid 246 of the alpha-toxin. 6. A peptide or peptide conjugate as claimed in any one of claims 1 to 5 wherein the peptide is a fusion peptide further comprising the amino acid sequence of glutathione-S-transferase. SUBSTITUTESHEET 7- A vaccine composition against the alpha-toxin of Clostridium perfringens comprising a peptide or peptide conjugate comprising the amino acid sequence of Clostridium perfringens alpha-toxin from amino acid 261 to 300 but lacking the epitopes or other sequences necessary for phospholipase C and/or sphingomyelin hydrolysing activity found between amino acids 1 to 240 of that sequence, together with a pharmaceutically acceptable carrier. 8. A vaccine composition as claimed in claim 7 wherein the peptide or peptide conjugate as claimed in any one of claims 3 to 6. 9. A vaccine composition as claimed in claim 7 or claim 8 further comprising an adjuvant. 10. A vaccine composition as claimed in claim 9 wherein the adjuvant is Freunds incomplete adjuvant. 11. Recombinant DNA encoding for a peptide as claimed in any one of claims 1 to 6. 12. Isolated DNA encoding for a peptide as claimed in any one of claims 1 to 6. 13. A plasmid comprising recombinant DNA encoding for a peptide as claimed in any one of claims 1 to 6. 14. A plasmid comprising isolated DNA as claimed in claim 12 that has been ligated with plasmid DNA. 15- A cell line comprising recombinant or isolated DNA or a plasmid as claimed in any one of claims 11 to 14. 16. A peptide as claimed in any one of claims 1 to 6 as expressed by a cell line as claimed in claim 15. SUBSTITUTESHEET 17. Antisera raised to a peptide or vaccine as claimed in any one of claims 1 to 10. 18. Antibodies raised to a peptide or vaccine as claimed in any one of claims 1 to 10. 19- Antibodies as claimed in claim 15 characterised in that they are monoclonal antibodies derived from hybridoma cells. 20. A method of treating Clostridium perfringens mediated disease in a human or animal comprising administering antisera or antibodies as claimed in any one of claims 17 to 19 in a pharmaceutically acceptable carrier. 21. A method of vaccinating a human or animal against Clostridium perfringens infection comprising administrating a peptide or conjugated peptide as claimed in any one of claims 1 to 6 in a pharmaceutically acceptable carrier. 22. A peptide or peptide conjugate or vaccine composition as claimed in any one of claims 1 to 10 for use as a medicament. 23. A peptide or peptide conjugate as claimed in claim 22 for use as a medicament in humans. SUBSTITUTE SHEET

Inventors: TITBALL RICHARD WILLIAM, WILLIAMSON ETHEL DIANE, TITBALL, RICHARD, WILLIAM, WILLIAMSON, ETHEL, DIANE
Applicants: SECR DEFENCE, TITBALL RICHARD WILLIAM, WILLIAMSON ETHEL DIANE, THE SECRETARY OF STATE FOR DEFENCE OF THE UNITED K
Application year: 1993
Main classification: C12N15
IPC codes: A61K39, A61P31, C07K14, C07K16, C07K19, C12N9, C12N15, C12P21, C12R1