NUCLEOTIDE SEQUENCES CODING FOR A HUMAN PROTEIN WITH ANGIOGENESIS REGULATIVE PROPERTIES

Abstract: A cDNA sequence coding for a human protein having regulative properties of angiogenesis has been isolated and sequenced. Expression vector containing such sequence have been constructed and, after transformation of host cells, the synthesis of the related protein has been obtained. Such protein called PlGF can be employed both in the tumoral immunologic and diagnostic field and in the therapeutic field for pathologies related to the formation of vessels, as for instance the healing of wounds and so on.

Description: NUCLEOTIDE SEQUENCES CODING FOR A HUMAN PROTEIN WITH ANGIOGENESIS REGULATIVE PROPERTIES This invention relates to nucleotide sequences coding for a human protein having angiogenesis regulative properties. More particularly, this invention relates to the isolation and to the molecular characterization of a gene coding for a new protein having the properties of an angiogenic factor which regulates in. vivo the formation and/or the regeneration of the vertebrate blood vessel system, and it also relates to the protein itself. Moreover, this invention also refers to vectors containing such sequence or parts thereof, to prokaryotic and eu aryotic cells transformed with such vectors, and to the employment of such vectors and of such cells for the production of the protein and of corresponding polyclonal and/or monoclonal antibodies as well. It is well known that growth factors are polypeptides, synthesized and secreted by mammalian cells, capable of acting not only on the prolifera ion, but also on the differentiation and morphogenesis of target cells. Indeed, it has been shown that some growth factors exert their action by regulating mechanisms such as chemiotaxis, activation of inflammatory system cells and repairing of tissues (Whitman, M. and Melton, D. A., 1989, Annual Rev. Cell Biol., 5, 93-117). Because of the similar phenotype between cultured growth factors stimulated and retrovirus transformed cells, it has been suggested that common mechanisms control such phenomena. Indeed, the interaction between a growth factor and its own specific- receptor indirectly activates gene activity regulative proteins, through intermediate reactions involving different protein-kinases. Many of the components of this metabolic chain have been identified as the cellular analogs of viral oncogenes, suggesting how oncoviruses could interfere with normal cellular processes. Many growth factors have been identified up to the present time, the corresponding genes have been cloned, and such factors have been divided into groups, on the basis of similar activities and/or of sequence homologies; among them there is the family of angiogenic factors. Angiogenesis, or the formation of vessels of the vascular system, is a complex process occuring during embryogenesis, wound healing and organ regeneration. Moreover, some pathologies like the growth of solid tumors, some retinopathies and rheumatoid arthritis induce an aberrant angiogenesis (Risau W., 1990, Progress in Growth Factor Research, 2, 71-79). Angiogenesis i__ vivo is a multi-step process, two of them being represented by the migration and the proliferation of endothelial cells devoted to the formation of vessels. In the most recent years, many angiogenic factors have been identified, and the corresponding genes cloned. Among them: angiogenin, subject-matter of the patent application PCT no. 8701372; the platelet-derived endothelial growth factor PD-ECGF (Ishigawa et al., 1989, Nature, 338, 557); the human vascular permeability factor, VPF (Keck et al., 1989, Science Ξ-yό , 1309), which was cloned also in the mouse with the denomination of vascular endothelial growth factor, VEGF (Leung et al., 1989, Science, 2 6, 1306); the growth factors for fibroblasts, i.e., the acid factor, a-FGF, and the basis factor, b-FGF, the transforming growth factors alpha, TGF-.. , and beta, TGF-.. (Folkman and Klagsburn, 1987, Science, 235, -v-,~ ) . Angiogenic factors have been divided into two groups, according to their way of action: either directly on the vascular endothelial cells, by stimulating motility or mitosis, or indirectly on cells producing growth factors acting on endothelial cells. I__ vitro analysis have put into evidence that angiogenic factors exert different effects on the motility and on the prolifera ion of endothelial cells. Indeed, some of them stimulate just one of the two events, other ones stimulate both events, whereas others seem to be ineffective i__ vitro . and , lastly, other ones show even an inhibiting activity of the endothelial cellular prolifera ion. Such data point out that the regulation of angiogenesis is a complex process mediated by diffrent components, many of which have not been identified as yet. Accordingly it is evident that there is the need for identifying and isolating new angiogenic factors capable of stimulating the migration and differen iation of endothelial cells, to be utilized both in the diagnostic field, as tumoral markers and for inflammatory diseases, and in the therapeutical field, for topic or internal use, for instance in the treatment of wounds, of tissues after a surgical operation, of transplantation, of burns, ulcers, etc.. Such factors can be employed successfully also _i_n vitro. as growth-stimulating of cell cultures. Moreover, DNA recombinant techniques allow such factors to be produced in suitable amounts, in short times and at remarkably low costs. Indeed, there is an increasing need for identifying new specific tumoral markers because of uncertainties in tumor diagnosis. Moreover, recent methods for producing hybrid proteins (Fitzgerald D. and Pastan I., 1989, J. Natl. Cancer Inst. 81, l<+55-l<+63) and/or conjugate antibodies (Pearson, J. W. et al . , 1989 Cancer Res. <+9, 3562-3567) with toxic molecules, are giving promising results in the field of tumoral serotherapy, with an increasingly growing demand for new factors to test. Finally, many of angiogenic factor genes have been cloned starting from tumoral cells, whereas a better applicability in the therapeutic field of genes co ing from non-neoplastic material is evident. Accordingly, this invention provides nucleotide sequences coding for a protein having a regulative activity of angiogenesis, said sequences being obtained from non-neoplastic tissue; vectors containing said sequences; cells transformed by said vectors and producing protein having biologic and/or immunologic activities of a new angiogenic factor, as well as the protein itself, to be employed in diagnostic and therapeutic fields. This invention also provides a procedure for obtaining the protein, or parts thereof, by recombinant techniques, as well as its use as an antigen for the production of the corresponding polyclonal or monoclonal antibodies. Indeed, molecular probes comprising sequences coding for the angiogenic factor su ject-matter of the present invention can be employed as markers in the diagnosis of pathologies related to the aberrant production thereof, as the case of some tumoral pathologies for other angiogenic factors. Moreover, the protein which is another subject-matter of this invention can be employed in the treatment of inflammatory diseases, in the treatment of wounds, of tissues after surgical operations, of transplantation, of burns of ulcers and so on. Such factor can also be employed ijn_ vi tro successfully, as growth stimulating of cell cultures. Finally, DNA recombinant techniques employed in the present invention allow to produce the molecular probes and proteins described above in suitable amounts, in short times and at remarkably reduced costs. The nucleotide and a mo acids chains of this invention can be employed for diagnostic tests and for theraupetic purposes, both as directly derived from host cells and as after suitable modifications, for obtaining a better production for composi ions. Accordingly, the object of this invention consists in nucleotide sequences coding for a protein,named P1GF, with immunogenic and/or biologic properties of an angiogenesis regulative factor, having the a inα acids sequence of SEQ ID Nl . As another embodiment of the invention, the P1GF a ino acid sequence derives from alternative splicings of the primary transcript, preferably at the nucleotide sequence shown in SEQ ID NΞ, most preferably giving rise to an amino acid insertion of 21 amino acids, whose sequence is shown in SEQ ID N2, at position l<+l-1 -2 of the amino acid sequence shown in SEQ ID Nl. An object of this invention also consists in nucleotide sequences coding for the P1GF protein, lacking and/or substituted in one or more amino acids, preferably deleted from the amino acid 1 to the amino acid 31 of SEQ ID Nl; the present invention also provides nucleotide sequences which are allelic derivatives of the sequence coding for SEQ ID Nl , as well as nucleotide sequences that are complementary to those coding for SEQ ID Nl . Again according to the present invention the nucleotide sequence can be covalently bounded to a nucleotide sequence which can be translated into amino acid sequence by employing the same reading frame of the gene coding for P1GF, which preferably does not interfere with the angiogenesis regulative activity of P1GF, and which more preferably codes for a protein portion having toxic activity. Accordingly, the object of this invention also consists in the nucleotide sequence of SEQ ID Nl , even though the same is lacking and/or substituted in one or more nucleotides, coding at its coding part for the protein PIGF, as in SEQ ID Nl . The present invention also provides nucleotide sequences hybridizing with SEQ ID Nl . or parts thereof; nucleotide sequences obtained both through natural and synthetic or semisynthetic methods, bv substitution, deletion, insertion and inversion mutations, either concerning single bases or multiple bases, of sequence described in SEQ ID Nl , or parts thereof; and nucleotide sequences comprising sequences coding for a protein having immunogenic and/or biologic properties similar to those exhibited by the protein PIGF or parts thereof. A further aspect of this invention relates to the protein PIGF having the sequence disclosed in SEQ ID Nl , or parts thereof, obtained either by means of recombinant DNA techniques or isolated from biologic tissues. Said protein, or parts thereof which are immunological ly active, can be employed as antigenes for producing polyclonal and/or monoclonal antibodies. The present invention also provides cloning and/or expression vectors, both prokaryotic and eukaryotic, comprising the nucleotide sequences sub ect-matter of the invention, sequences promoting transcrip ion located upstream and, in general, a selective marker. Preferably, sequences promoting transcription in an inducible manner, can also be present and enhancers, polyadenylation signals and so on, as well. Again an object of the present invention consists in prokaryotic and eukaryotic cells transformed by said vectors to be employed for producing the PIGF protein or parts therof. Just for illustrative and not for limitative purposes the present invention will be described in the following examples. In what follows reference will be made to the enclosed Figures wherein: Figure 1 represents the restriction map of the recombinant Λ GT11 phage, comprising the sub 32 fragment; Figure 2 represents a "Northern blot" experiment employing the sub 32 cDNA fragment; Figure 3 represents the restriction map of the plasmid pPlGF-2; Figure - represents an exemplificative scheme of subcloning of a fragment coding for a portion of the protein PIGF in the expression vector pET3 (Novagen, Madison WI, USA) ; Figure 5 represents a polyacryla ide gel electrophoresis of the protein PIGF, said protein being obtained through the recombinant way. Example 1 Isolation of the cDNA codinα for a_ new anqioqenic factor A first cDNA fragment, named sub 32 , was isolated from a clone of a cDNA library from human placenta, in the / \ GT11 vector, according to conventional procedures and employed also in other laboratories (Wataneb et al., J. Biol. Chem. 26<+, 12611-19, 1989). Briefly, RNA was extracted through lysis with guanidine thiocyanate and centrifuging on a discontinuous gradient of caesium (Sambrook J., Fritsch E.F., Maniatis T., Molecular Cloning - A Laboratory Manual. Second edition. Vol. 1, 7.19. Cold Spring Harbor Lab. Press). The poly A-+- RNA was purified through chromatography on oligo-dT cellulose (ibid. 7.26). The cDNA synthesis and the cloning of the Λ GT11 phage vector (Stratagene, La Jollθ California, USA) in the Eco Rl restriction site was carried out following the protocol described ibid. 8.54-8.79. A clone, whose map is shown in Figure 1, was identified because of comprising also a sequence of 2600 nucleotides capable of hybridizing, in 5x SSC at 65C according to the hybridization procedure on filters described ibid. 8.46, with a sequence coding for the cDNA of the glucose-6-phosphate dehydrogenase enzyme (G6PD) (Persico, M. et al., 1986, Nucl. Acid Res., 14, 2511). A fragment of 40 nucleotides was also isolated from this recombinant phage after digestion with Eco Rl and Bam HI, and the fragment was called sub 32. Said fragment, after labelling with 32P by means of the "nick translation" procedure disclosed ibid. 10.6-10.8 was employed for: a) analyzing RNAs extracted from different tissues or cell lines, by "Northern blot" procedure as described in ibid. 7.37. The results shown in Figure Ξ show that the sub 32 fragment detects specific mRNA in the placenta (line 2), in HEPG2 hepatoma cells, ATCC N. HB8065 (line 3), in JEG human choriocarcinoma cells, ATCC N. HTB36 (line 4) and, at lower concentration, in Hela S3 cells, ATCC N. CCL2.2 (line 5), but not in HL60 cells, ATCC N. CCL240 (line 1) ; b) screening a cDNA library from JEG human choriocarcinoma JEG, ATCC N. HTB36, according to the procedures described for the cDNA library from human placenta, in the GT10 vector (Stratagene, La Jolla California, USA), in the Eco Rl site. Two clones were isolated, digested with Eco Rl and subcloned in the pUC 18 vector (Stratagene, La Jolla, California, USA) and the sequence determined by Sanger ' s method (ibid. 13.6-13.10). The sequence revealed the fragmnents overlapped partially one another, but did not comprise the whole sequence coding for the corresponding mRNA. Hence, the isolated fragments were employed for a second screening, employing the same techniques. The library employed was the cDNA library from human placenta, from which the initial sub 32 fragment came from. Then two clones were isolated, their DNA was digested with Eco Rl , the resulting inserts were subcloned in the pGEM 1 vector (Promega Corporation, Madison WI . , USA) and their sequence was determined by Sanger ' s method. The two DNA fragments obtained after digestion with Eco Rl were religated together through T4-ligase and cloned in the same pGEM 1 vector in the Eco Rl site, to obtain the whole cDNA sequence corresponding to the mRNA present in the placenta, in a single plasmid, called pPlGF-2 (ATCC Dep . No. 40892), whose map is shown in Figure 3. In order to confirm that the resulting fragment covers the whole coding sequence, the sequence was compared with the sequence of a genoma fragment obtained after hybridization of the same fragment with a genomic library from human fibroblasts WI38 (No. 944201 Stratagene, La Jolla, California, USA) in the / \ Fix vector . The cDNA sequence was identified according to Sanger ' s method (ibid. 13.3-13.10) and revealed: a) 5' end untranslated region of 321 nucleotides comprising a sequence capable of forming a stem-loop secondary structure, indicative of a translation regulative signal; b) a sequence of 447 nucleotides with an open reading frame coding for a protein of 149 amino acids, comprising a hydrophobic sequence of 32 amino acids at the NH2- , indicative of the signal peptide of secreted proteins; c) a 3' end untranslated region of 877 nucleotides comprising a polyadenylation site. The amino acid sequence, deduced by the cDNA sequence, was inserted into the European Molecular Biology Laboratory (EMBL) Data Bank, showing no protein with the same sequence. A 50*/. homology, limited to a 120 amino acid region, was shown with the vascular permeability factor VPF (Keck et al . , 1989, Science, 246, 1309), a powerful angiogenic factor, thus suggesting that the new protein PIGF can have by itself an angiαgenesis-regulating activity. Example 2 Screeninq of a. cDNA 1 ibrary from JEG-3 eel Is wi th pPLGF and structure of PIGF-qene A cDNA library, obtained from JEG-3 cell mRNA, was screened with the PIGF probe. Six recombinant phages were isolated. The sequence of two of them revealed they have a lenght of 510 b , generating a 170 amino acid protein. The sequence resulted to be identical to the cDNA isolated from placenta, but an insertion of 63 bp , generating a 21 amino acid insertion into the protein, at position 141-142. Interestingly, the new sequence contains 10 basic amino acids (Arg and Lys) over 21. Example 3 enomic mapping and cloning of the PIGF gene The gene coding for the protein PIGF was mapped on the chromosome 14 through "Southern blot" analysis, by employing DNA from different hybrid cellular lines, each containing different human chromosomes (not shown). The structure and part of the nucleotide sequence of the PIGF gene was determined from a human genomic library. The gene is divided into six exons and five intervening sequences generating, through splicing, the transcript coding for the 149 aa. protein. In choriocarcinoma cells (JEG-3) the primary transcript is alternatively spliced at the fifth intron to generate a transcript coding for the 170 aa. (see SEQ ID N2). Another alternative splicing involving the sequence from 174 to 828 of SEQ ID N2 of the fifth intron, gives rise to an higher molecular weigth PIGF protein. In fact two proteins are immunoprecipitated from JEG-3 conditioned medium, with antibodies anti PIGF. Example 4 Subcloninq of PIGF cDNA in a. prokaryotic expression vector A scheme of the subcloning strategy is shown in Figure 4, wherein the pET3 vector was employed (Novagen Madison Wi ; USA) containing essentially the T7 phage RNA polymerase promoter, the terminator of the same phage, an origin of the replication (ori) and the resistance to ampicillin (amp). The cDNA insert to be subcloned was obtained through PCR amplification (polymerase chain reaction, ibid. 14.6), generating a cDNA coding for the protein lacking the first 31 amino acid ** - As template, the Eco Rl DNA fragment, from nucleotiαe 1 to nucleotide 940, was employed. As primers for RNA polymerase the following ol igonucleotides were employed, synthesized with an "Applied Biosystem 381A" oligo-synthesizer: - o1 igonucleo ide A complementary to the coding strand from the nucleotide 768 to the nucleotide 787, in which the GGATCC sequence, Bam HI recognition site, was inserted between nucleotides 775 and 776, having the following sequence: 5 ' -TCCTCCAAGGGGATCCTGGGTTAC-3 ' BamHl - o1igonuceo ide B complementary to the non-coding strand from nucleotide 404 to nucleotide 421, in which the CATATG sequence, Nde 1 recognition site, was inserted between the nucleotides 414 and 415, having the following sequence: 3 ' -GCAAGGGGTATACTCGTCTGTTCC-5 ' Ndel The nucleotide chain, αotained from PCR, was digested with Nde 1 and Bam HI and ligated with the prokaryotic pET3 expression vector in the same Nde 1 and Bam HI sites according to standard protocols. The product was employed for transforming the E.coli HBlOl strain which had been made competent with the CaC12 method. The recombinant plasmid was identified and employed for transforming the E.coli JM109 strain (DE3, Pro ega Corporation, Madison WI , USA). Example 5 Synthesis and isolation of the PIGF protein from bacteria A single colony was inoculated in LB broth containing 100 μg/ml of amplicillin (Sigma, St. Louis MO., USA) and 4 g/1 of glucose and then grown at 37C to reach an optical density O.D. of 0.35 at 600 nm. IPTG (Sigma) was added to a 1 mM final concentration and the culture was incubated at 37C for additional 3 hours. The culture was centrifuged and resuspended in 1/10 of the initial volume of a buffer containing 10 mM Tris-HCl, 1 mM EDTA, pH 8.0 (TE). Following further centrifugation, the precipitate was resuspended in 1/60 of the initial volume into a lysis buffer containing TE, 1 * /. SD5, 0.1 M NaCl. Bacteria were divided into aliquots of 500 ul and subjected to lysis by three cycles- of freezing and thawing, followed by middle strength sonication. An example of the resulting electrophoretic pattern is shown in Figure 5, wherein lines 1, 2, 3 and 4 represent electropnore ic patterns of proteins from lysates respectively 0, 1, 2 and 3 hours after IPTG induction. As control, line 5 represents the same strain transformed only with the vector lacking the insert, induced with IPTG for 3 hours. Electrophoresis was carried out according to Laemli, Nature, 227, 80-685, 1970, in a 15'/. polyacrylamide gel stained according to the method described by Bradley et al . , Anal. Biochem. 182, 157-159 (1989). Example 6 Produc ion of anti PIGF antibodies and immunoprecipitations of PIGF 70 μg of the protein PIGF was employed for immunizing two chickens, as described by Gassmann et al . , 1990 Faseb J. 4, 2528-2532. The antibodies so formed were extracted and purified from the yolk through precipitation with polyethylene glycol (PEG) as described by Gassmann et al . (cf. above). The immunoprecipitations were performed by incubating 120-250 ul of cellular lysate, or Cos-1 cell conditioned medium, with 10 or 15 ul of rabbit or chicken antibodies, for 2 hours at room temperature, or 16 hours at 4C. The immunoreactions with chicken antibodies were further treated with 15 ul of rabbit anti-chicken IgG (SIGMA N. C6778) , for 1 hour at room temperature. The immunocomplex was selectioned through protein-Sepharose 4B (Pharmacia) and washed twice with 1.2 ul of PBS with 0.017. Nonidet-P40 and 400 uM of NaCl. The immunoprecipi ates were then resuspended and analyzed on po1yacrylamide gel under denaturing and reducing conditions according to standard procedure. If COS cells had been previously transfected with the plasmid pSVL-PlGF, a protein of 25 KDa molecular weight is immunoprecipitated , both from the lysate and from the culture medium. SPECIMEN SEQUENCE LISTING SEQ ID N.l SEQUENCE TYPE: nucleotide with corresponding protein at the coding region SEQUENCE LENGTH: 1645 bp STRANDEDNEΞΞ: single TOPOLOGY: linear MOLECULE TYPE: cDNA to mRNA HYPOTHETICAL SEQUENCE: no ANTI-SENSE: no ORIGINAL SOURCE: cDNA placental library ORGANISM: human IMMEDIATE EXPERIMENTAL SOURCE: pPlGF-2 (ATCC N.40892) FEATURES: from 1 to 321 bp 5' end untranslated region from 322 to 768 bp coding region from 769 to 1645 bp 3' end untranslated region PROPERTIES: 10 20 30 40 50 60 GGGATTCGGGCCGCCCAGCTACGGGAGGACCTGGAGTGGCACTGGGCGCCCGACGGACCA 70 80 90 100 110 120 TCCCCGGGACCCGCCTGCCCCTCGGCGCCCCGCCCCGCCGGGCCGCTCCCCGTCGGGTTC 130 1 0 150 160 170 180 CCCAGCCACAGCCTTACCTACGGGCTCCTGACTCCGCAAGGCTTCCAGAAGATGCTCGAA 190 200 210 220 230 240 CCACCGGCCGGGGCCTCGGGGCAGCAGTGAGGGAGGCGTCCAGCCCCCCACTCAGCTCTT 250 260 270 280 290 300 CTCCTCCTGTGCCAGGGGCTCCCCGGGGGATGAGCATGGTGGTTTTCCCTCGGAGCCCCC 310 320 330 340 350 360 TGGCTCGGGACGTCTGAGAAGATGCCGGTCATGAGGCTGTTCCCTTGCTTCCTGCAGCTC MetProValMetArgLeuPheProCysPheLeuGlnLeu 370 380 390 400 410 420 CTGGCCGGGCTGGCGCTGCCTGCTGTGCCCCCCCAGCAGTGGGCCTTGTCTGCTGGGAAC LeuAlaGlyLeuAla euProAlaValProProGlnGlnTrpAlaLeuSerAlaGlyAsn 430 440 450 460 470 480 GGCTCGTCAGAGGTGGAAGTGGTACCCTTCCAGGAAGTGTGGGGCCGCAGCTACTGCCGG GlySerSerGluValGluValValProPheGlnGluValTrpGlyArgSerTyrCysArg 490 500 510 520 530 540 GCGCTGGAGAGGCTGGTGGACGTCGTGTCCGAGTACCCCAGCGAGGTGGAGCACATGTTC AlaLeuGluArgLeuValAspValValSerGluTyrProSerGluValGluHisMetPhe 550 560 570 580 590 600 AGCCCATCCTGTGTCTCCCTGCTGCGCTGCACCGGCTGCTGCGGCGATGAGAATCTGCAC SerProSerCysValSer eu euArgCysThrGlyCysCysGlyAspGluAsnLeuHis 610 620 630 640 650 660 TGTGTGCCGGTGGAGACGGCCAATGTCACCATGCAGCTCCTAAAGATCCGTTCTGGGGAC CysValProValGluThrAlaAsnValT rMetGlnLeuLe LysIleArgSerGlyAsp 670 680 690 700 710 720 CGGCCCTCCTACGTGGAGCTGACGTTCTCTCAGCACGTTCGCTGCGAATGCCGGCCTCTG ArgProSerTyrValGluLeuThrPheSerGlnHisValArgCysGluCysArgProLeu 730 740 750 760 770 780 CGGGAGAAGATGAAGCCGGAAAGGTGCGGCGATGCTGTTCCCCGGAGGTAACCCACCCCT ArgGluLysMetLysProGluArgCysGlyAspAlaValProArgArg 790 800 810 820 830 840 TGGAGGAGAGAGACCCCGCACCCGGCTCGTGTATTTATTACCGTCACACTCTTCAGTGAC 850 860 870 880 890 900 TCCTGCTGGTACCTGCCCTCTATTTATTAGCCAACTGTTTCCCTGCTGAATGCCTCGCTC 910 920 930 940 950 960 CCTTCAAGACGAGGGGCAGGGAAGGACAGGACCCTCAGGAATTCAGTGCCTTCAACAACG 970 980 990 1000 1010 1020 TGAGAGAAAGAGAGAAGCCAGCCACAGACCCCTGGGAGCTTCCGCTTTGAAAGAAGCAAG 1030 1040 1050 1060 1070 1080 ACACGTGGCCTCGTGAGGGGCAAGCTAGGCCCCAGAGGCCCTGGAGGTCTCCAGGGGCCT 1090 1100 1110 1120 1130 1140 GCAGAAGGAAAGAAGGGGGCCCTGCTACCTGTTCTTGGGCCTCAGGCTCTGCACAGACAA 1150 1160 1170 1180 1190 1200 GCAGCCCTTGCTTTCGGAGCTCCTGTCCAAAGTAGGGATGCGGATTCTGCTGGGGCCGCC 1210 1220 1230 1240 1250 1260 ACGGCCTGGTGGTGGGAAGGCCGGCAGCGGGCGGAGGGGATTCAGCCACTTCCCCCTCTT 1270 1280 1290 1300 1310 1320 CTT CTGAAGATCAGAACATTCAGCTCTGGAGAACAGTGGTTGCCTGGGGGCTTTTGCCAC 1330 1340 1350 1360 1370 1380 TCCTTGTCCCCCGTGATCTCCCCTCACACTTTGCCATTTGCTTGTACTGGGACATTGTTC 1390 1400 1410 1420 1430 1440 TTTCCGGCCGAGGTGCCACCACCCTGCCCCCACTAAGAGACACATACAGAGTGGGCCCCG 1450 1460 1470 1480 1490 1500 GGCTGGAGAAAGAGCTGCCTGGATGAGAAACAGCTCAGCCAGTGGGGATGAGGTCACCAG 1510 1520 1530 1540 1550 1560 GGGAGGAGCCTGTGCGTCCCAGCTGAAGGCAGTGGCAGGGGAGCAGGTTCCCCAAGGGCC 1570 1580 1590 1600 1610 1620 CTGGCACCCCCACAAGCTGTCCCTGCAGGGCCATCTGACTGCCAAGCCAGATTCTCTTGA 1630 1640 ATAAAGTATTCTAGTGTGGAAACGC SEQ I D N .2 SEQUENCE TYPE: nucleotide with the corresponding aminoacid sequence for a reading frame SEQUENCE LENGTH: 828 bp STRANDEDNESS: single TOPOLOGY: linear MOLECULE TYPE: genomic DNA HYPOTHETICAL SEQUENCE: no ANTI-SENSE: no ORIGINAL SOURCE: genomic library ORGANISM: human IMMEDIATE EXPERIMENTAL SOURCE: plqfisS FEATURES: from 1 to 82B bp 5' end of the fifth intervening sequence of the PIGF gene from 110 to 172 bp coding region due an alternative splicing of the primary transcript from 175 to 828 bp coding region due to anothe* * alternative splicing of the primary transcript PROPERTIES: 10 20 30 40 50 60 GTAAGTGGTTTGGCTGGGGCTCGGGGCTATTCTATTCTCGGGCCTGCCAGCCTCTGTCCT 70 80 90 100 110 120 AGCATGGGGTTCCCCAGCCACCTTGTCCTGACGCTTGGCTTATTGCAGGAGGAGACCCAA ArgArgProLy 130 140 150 160 170 180 GGGCAGGGGGAAGAGGAGGAGAGAGAAGCAGAGACCCACAGACTGCCACCTGTGAGTGCG sGlyArgGly ysArgArgArgGluLysGlnArgProThrAspCysHis eu 190 200 210 220 230 240 CGGGGTCCCAGGGATGGCGAGGAGGCTGGGCCCGAGGGGAGCCCCGCCTTGCCGCCAGGG 250 260 270 280 290 300 TTAGGTTGGGGAGGGGGAGAGGCAGGACTGAGGCCAGTCTTGGGG(G)CAGAACAGGGAN 310 320 330 340 350 360 CTGCACCTCCTCAAGACTCTAGGGCCCAGGAAGCATCAGTGGACCTTGGTTTTTATCCCG 370 380 390 400 410 420 GCTTAGCCTAGGTTTCCATTGACCTTCAACAAATCATTTCACCTTTGTCAGCCTAGCTTT 430 440 450 460 470 480 TCTCTGTGTAGAATGAGGGGCAGGAGGTCCAGCAAACATTCAGTCACTCTACAAACATTT 490 500 510 520 530 540 ACTGAGCACTTACTGTGTGTCAGGTACATCTGTGAGCAAACAAACAGGATTCCTGCACAT 550 560 570 580 590 600 TAGTGTTTACCTTTTAGTGATTAAAAGTCTGTCATCAGCTGAGACGTTATCTGGGGCCAC 610 620 630 640 650 660 TTCCTAGTAGCCCGGGGAACATGTGCCCTCNCACTGTCTCCCAGGAGTATTTTTGCCTGT 670 680 690 700 710 720 GGGTCCCCTTGCTGCTTCTAACCCACTTCGTACCTTGTGGGCAGCAGAATGGAGCCCCAG 730 740 750 760 770 780 GCCTGAGTGTGGCTGGGAGAGAAGGATGAGAGGAGGGAAAACCCAAATCTGTGAGAGTAA 790 800 810 820 ATAGAAAAAATAAAATATTTCACGTGCACAGTCAATCAGTCACTGAAG

Claims: CLAIMS 1. A nucleotide sequence comprising a sequence coding for a protein with angiogenesis regulative activity having the sequence of SEQ ID Nl . 2. A nucleotide sequence according to claim 1 wherein said coded protein derives from alternative splicings, different from those generating the sequence protein of SEQ ID Nl . 3. A nucleotide sequence according to claim 2 wherein said alternative splicing generates a transcript coding for a protein with SEQ ID Nl , with an insertion of 21 aa.. as in SEQ ID N2, at position 141-142 of SEQ ID Nl . 4. A nucleotide sequence according to any of the previous claims, wherein said protein lacks one or more amino acids. 5. A nucleotide sequence according to any of the previous claims, wherein said protein has an altered regulative activity of angiogenesis. 6. A nucleotide sequence according to claims 4 or 5 wherein said protein is deleted from the amino acid 1 to the amino acid 31. 7. A nucleotide sequence according to any of claims 1 to 3 wherein one or more amino acids have been substituted in said protein. 8. A nucleotide sequence according to claim 7, wherein said protein shows an altered regulative activity of angiogenesis. 9. A nucleotide sequence according to any of the previous -laims wherein said protein is an allelic derivative. 10. A nucleotide sequence complementary to a sequence according to any of the previous claims. 11. A nucleotide sequence according to any of the previous claims, to which a nucleotide sequence, that can be translated with the same reading frame, has been covalently linked to the 5' or to the 3' positions. 12. A nucleotide sequence according to claim 11, wherein said linked nucleotide sequence codes for an amino acid sequence which does not interfere with the regulative activity of angiogenesis of the protein. 13. A nucleotide sequence according to claims 11 or 12 wherein said linked nucleotide sequence codes for a protein having a toxic activity. 14. A nucleotide sequence comprising the sequence of SEQ ID Nl, wherein the 5' end region from the nucleotide 1 to the nucleotide 321 is untranslated, the region from the nucleotide 322 to the nucleotide 768 codes for a protein with angiogenesis regulative activity, the 3' end region is untranslated. 15. A nucleotide sequence according to claim 14 comprising at least a part of sequence of SEQ ID N2. 16. A nucleotide sequence according to claim 14 or 15 lacking one or more nucleotides, coding for a protein having a regulative activity of angiogenesis. 17. A nucleotide sequence according to claims 14 or 15 lacking one or more nucleotides, coding for a protein having an altered regulative activity of angiogenesis. 18. A nucleotide sequence according to claims 16 or 17 which is deleted from the nucleotide 322 to the nucleotide 414. 19. A nucleotide sequence according to claims 14 or 15 wherein one or more nucleotides have been substituted, coding for a protein having a regulative activity of angiogenesis. 20. A nucleotide sequence according to claims 14 or 15 wherein one or more nucleotides have been substituted, coding for a protein with an altered regulative activity of angiogenesis. 21. A nucleotide sequence according to claims 14 or 15, wherein said untranslated 5' region comprises a regulative region of the translation. 22. A nucleotide sequence according to claim 21, wherein said regulative region forms a stem-loop secondary structure. 23. A nucleotide sequence which is allelic to the nucleotide sequence according to claims 14 or 15. 24. A nucleotide sequence which is complementary to a nucleotide sequence according to any of the previous claims from 14 to 23. 25. A protein comprising the amino acid sequence of SEQ ID Nl having a regulative activity of angiogenesis. 26. A protein according to claim 25 wherein said protein comprises an insertion derived from alternative splicing of the primary transcript. 27. A protein according to claim 26 wherein said insertion is at position 141-142 of SEQ ID Nl and comprises a sequence coded by at least a portion of SEQ ID N2. 28. A protein according to claim 27 wherein said sequence is of 21 amino acids as in SEQ ID N2. 29. A protein according to any of claims 22 from 25 to 28 wherein said protein lacks one or more amino acids. 30. A protein according to claim 29, wherein said protein shows an altered regulative activity of angiogenesis. 31. A protein according to claims 29 or 30, wherein said protein is deleted from the amino acid 1 to the amino acid 31. 32. A protein according to any of claims from 25 to 28 wherein one or more amino acids have been substituted in said protein. 33. A protein according to claim 32 wherein said protein shows an altered regulative activity of angiogenesis. 34. A protein coded by a nucleotide sequence which is an allelic derivative of the nucleotide sequence according to any of claims from 1 to 3. 35. A protein comprising an amino acid sequence according to anyone of the previous claims from 25 to 34, to which an ammo acid chain is covalently linked at the terminal COOH or NH2 groups. 36. A protein according to claim 35, wherein said amino acid chain does not interfere with the regulative activity of the angiogenesis of the protein itself. 37. A protein according to any of claims 35 or 36, wherein said amino acid chain shows a toxic cell activity. 38. A vector comprising: a) the replication origin of a bacterial plasmid, b) a selective marker, c ) a promoter and under thr? control of said promoter, d) the nucleotide sequence according to any of the previous claims from 1 to 24. 39. A vector according to claim 38, wherein said selective marker is a gene coding for an antibiotic resistance. 40. A vector according to any of claims 38 or 39, wherein said promoter is T7 phage RNA polymerase promoter . 41. A vector according to any of claims from 38 to 40 wherein said vector comprises the plasmid pGem 1. 42. A vector according to any of claims from 38 to 40 wherein said vector comprises the plasmid pET3. 43. A vector according to any of claims from 38 to 42 comprising one or more sequences that regulate the transcription. 44. A vector according to claim 43, wherein said sequences comprise a transcrip ion enhancer. 45. A vector according to claim 43 wherein said sequences comprise an inducible promoter. 46. A vector according to any of claims from 38 to 45 comprising a polyadenylation site. 47. Cells transformed with a vector according to any of claims from 38 to 46. 48. Cells according to claim 47 wherein said cells are bacterial cells. 49. Cells according to claim 48 wherein said bacteria are E.coli. 50. Cells according to claim 47 wherein said cells are eukaryotic cells. 51. A process for the production and extraction of the protein PIGF from cells according to any of claims from 47 to 49, said process comprising: growing the bacterial culture in liquid medium to an optical density between 0.2 and resuspending in TE; centrifuging and resuspending in a lysis buffer; lysing the cells.

Inventors: MAGLIONE DOMENICO, PERSICO MARIA, MAGLIONE, DOMENICO, PERSICO, MARIA
Applicants: CONSIGLIO NAZIONALE RICERCHE, CONSIGLIO NAZIONALE DELLE RICERCHE
Application year: 1991
Main classification: C12N15
IPC codes: C07K14, C07K16, C12N1, C12N5, C12N15, C12P21, C12R1