Crystalline r-h-GM-CSF and method for its preparation

Abstract: This invention provides a crystalline form of recombinant human granulocyte-macrophage colony-­ stimulating factor (r-h-GM-CSF), and methods for making such crystals.

Description: This invention relates to recombinant human granulocyte-macrophage colony-stimulating factor (r-h-GM-CSF), and in particular to a crystalline form thereof. Colony-stimulating factors represent a family of proteins that are required in vitro for the survival, proliferation and differentiation of hematopoietic progenitor cells of myeloid and erythroid lineage: Metcalf, D., The Hemopoietic Colony Stimulating Factors , Elsevier, Amsterdam (1984); Metcalf, D., Science. 229, 16-22 (1985); Metcalf, D., Blood 67, 257-267 (1986); and Clark, S.C., et al., Science 236, 1229-1237 (1987). Granulocyte-macrophage colony-stimulating factor (GM-CSF) stimulates the production of colonies of granulocytes and macrophages from their precursor cells and also promotes the growth and differentiation of pluripotent progenitor cells. In addition, GM-CSF can enhance a variety of the functional activities of mature effector cells [as reviewed by Morstyn, G., et al., Cancer Res . 48, 5624-5637 (1988)] and promote the differentiation of myeloid leukemic cells [Tomonaga, M., et al., Blood 67, 31-36 (1986)]. Although human GM-CSF has been purified from natural sources [Gasson, J.C., et al., Science 226, 1339-1342 (1984)], the low quantities produced have not permitted detailed characterization of its physiochemical and biological properties. The cloning of the complementary DNA encoding human GM-CSF and its expression in bacterial and mammalian cell hosts has enabled the preparation of large quantities of purified recombinant protein [Greenberg, R., et al., Curr. Micro. 17, 321-332 (1988); Burgess, A.W., et al., Blood 69, 43-51 (1987); and Lee, F., et al., Proc. Natl. Acad. Sci. (USA) 83, 3101-3105 (1985)]. Based on in vitro biology and the activity of GM-CSF in animal models [Mayer, P., et al., Blood 70, 206-213 (1987), and Donahue, R.E., et al., Nature 321, 872-875 (1986)], phase I/II clinical trials on recombinant GM-CSF have been initiated in myelodysplastic syndromes [Vadhan-Raj, S., et al., N Engl. J. Med. 317, 1545-1551 (1987)], acquired immunodeficiency syndrome [Groopman, J.E., et al., N. Engl. J. Med. 317, 593-598 (1987), and Baldwin G.C., et al., Proc. Natl. Acad. Sci. (USA) 85, 2763-2766 (1988)], and cancer [Brandt, S.J., et al., N. Engl. J. Med. 318, 869-876 (1988)]. The mature protein sequence of human GM-CSF consists of 127 amino acids, including four cysteine residues that form two disulfide linkages [Lee, F., et al., Proc. Natl. Acad. Sci. (USA) 83, 3101-3105 (1985), Cantrell, M.A., et al., Proc. Natl. Acad. Sci. (USA) 82, 6250-6254 (1985), and Schrimsher, J.L. et al., Biochem. J. 247, 195-199 (1987)]. Physical studies have suggested that human GM-CSF is a compact globular protein containing both alpha helical and beta sheet structures [Wingfield, P., et al., Eur. J. Biochem. 173, 65-72 (1988)]. We have now obtained crystalline, human, recombinant GM-CSF. The crystalline GM-CSF of the invention is mature, human, recombinant GM-CSF lacking an N-terminal methionine and having a methionine at position 80. We have demonstrated that the crystalline r-h-GM-CSF retains its full activity, i.e., upon redissolution in an aqueous system it possesses essentially the same activity as the r-h-GM-CSF starting material used in preparing the crystals. We have also characterized the crystals by X-ray crystallographic analysis. Preferably, the crystalline GM-CSF is non-glycosylated and is derived from E . coli . In a preferred embodiment, the r-h-GM-CSF used in the present invention, has the following complete amino acid sequence: Experimental Procedures Human GM-CSF was expressed periplasmically in E. coli with a secretory vector, pINIII ompA 2 [Greenberg, R., et al., Curr. Micro. 17, 321-332 (1988)]. Other methods for the expression of r-h-GM-CSF can be used; for example that of Lee et a., Proc. Natl. Acad. Sci. (USA) 82, 4060-4064 (1985). It was purified by conventional chromatography, as previously described (International Patent Application no. PCT/US 88/02294, Schering Corporation and Trotta, P.P., et al., published 26th January 1989 as WO 89/00579, corresponding to U.S. application serial no. 074,410 filed July 16, 1987), followed by reversed-phase high-performance liquid chromatography (HPLC) on a Rainin Dynamax-300Å C-4 column using a 27-72% gradient of acetonitrile in 0.1% trifluoroacetic acid. Crystals suitable for X-ray analysis were obtained by vapor-diffusion equilibration using either hanging droplets or sandwiched droplets. For hanging droplets, 20 µl droplets containing 20 mg/ml of protein in 10% polyethylene glycol 8000 (PEG-8000), 16 mM sodium phosphate, pH 8.0, were hung from siliconized coverslips inverted on Linbro plates. These droplets were equilibrated against 1 ml of 20% PEG-8000 in 16 mM sodium phosphate, pH 8.0. After 10-15 days at 4°C, orthorhombic crystals with dimensions up to 2.0 mm x 0.60 mm x 0.10 mm were obtained. Alternatively, for sandwiched droplet vapor-diffusion experiments, 20 µl droplets containing 20 mg/ml of protein in 10% PEG-8000, 16 mM sodium phosphate, pH 8.0, were equilibrated against 1 ml of 20% PEG-8000 in 16 mM sodium phosphate, pH 8.0. After 15-20 days at 4°C, crystals of the same general morphology and size appeared. In each procedure the crystals grew within the pH range of 6.5 to 8.5, preferably 7.0-8.0; we have obtained the best crystals at pH 8.0. For X-ray studies, crystals were mounted in glass capillaries and were photographed with a precession camera at 22°C using CuKα radiation from a Rigaku RU-300 rotating anode generator operating at 40 kV and 100 mA. A complete native data set was collected on a Nicolet X-100A area detector using the same radiation source. Several batches of crystals, some prepared by the hanging droplet method and some by the sandwiched droplet method, were subjected to X-ray analysis and gave consistent results as to space group and unit cell size. The results are described below. The crystalline GM-CSF of the invention can be used in basically the same manner in which prior GM-CSF materials have been used in pharmaceutical preparations, e.g., depot preparations of GM-CSF, which can be designed to administer a daily dose of 0.1 µg/kg to 100 µg/kg of GM-CSF. Such preparations contain a physiologically effective amount of the crystalline GM-CSF in association with a conventional pharmaceutically acceptable carrier. CHARACTERIZATION 1. BIOASSAY Individual crystals were extracted from hanging droplets with a syringe, and then resuspended in 100 µl of wash solution consisting of 20% PEG 8,000, 16 mM sodium phosphate, pH 7.5 at 4°C. The suspension was centrifuged and the wash solution was removed with a Pasteur pipette. The washed crystals were redissolved in 100 µl of 20 mM sodium phosphate, pH 7.5, 0.15 M sodium chloride, at 25°C. A protein determination and a cell-proliferation assay [Mosmann, T. J., Journal of Immuno. Methods 65, 55-63 (1983)] using the KG-1 cell line on the redissolved crystal solution yielded a specific activity of 2.7 x 10⁸ units/mg. This value is the same as that obtained for the original GM-CSF preparation prior to crystallization, within the limits of the precision of the assay (typically within the range 2 x 10⁸ to 3 x 10⁸ units per mg). 2. HPLC Analytical high performance reversed-phase liquid chromatography was run on an aliquot of the redissolved-crystal solution on a Rainin Dynamax C8 widepore (4.6 mm x 25 cm) column using a 27% acetonitrile : 0.1% trifluoroacetic acid to 72% acetonitrile : 0.1% trifluoroacetic acid linear gradient over a 30 minute period on a Waters analytical HPLC system. A Gilson variable wavelength detector set at 280 nm with a sensitivity of 0.02 absorbance units was used to monitor peaks. The retention times and chromatographic profiles of both the redissolved-crystal solution and the original GM-CSF preparation prior to crystallization were identical. From 1. and 2. above, there is clearly no reason to suppose that any chemical changes or any denaturing of the protein took place during the crystallization or reconstitution. 3. X-RAY DIFFRACTION ANALYSIS X-ray diffraction data were initially collected to 2.8 Å resolution using the area detector. Oscillation frames covered 0.25° and were measured for 10 min. A total of 6,797 reflections were measured; these were merged into 3,841 unique reflections. Indexing and integration of intensity data were carried out using XENGEN processing programs [Howard, A.J., et al., J. Appl. Crystallogr. 20, 383-387 (1987)]. The R sym value (based on I) for the data to 3.0Å was 0.087. The data indexed in the orthorhombic system with a = 126.9±2 Å, b = 47.4±1 Å and c = 59.1±1 Å. The space group P2₁2₁2₁ was specified by the systematic absence of reflections h 00 with h = 2 n +1, 0 k 0 with k = 2 n +1, and 00 l with l = 2 n +1. Subsequent X-ray precession photographs of GM-CSF confirmed the space group and the unit cell dimensions. The crystals are stable to X-rays at room temperature for at least three days and diffract to 2.5 Å resolution or better. Based on a molecular weight of 14,477 daltons as predicted from the cDNA of the crystalline r-h-GM-CSF used [Lee, F., et al., Proc. Natl. Acad. Sci. (USA) 83, 3101-3105 (1985)], the calculated values of V m [Matthews, B.W., J. Mol. Biol. 33, 491-497 (1968)] for two or three molecules per crystallographic asymmetric unit are 3.07 and 2.05, respectively. Assuming a partial specific volume of 0.724 cm³/g [Wingfield, P., et al., Eur. J. Biochem. 173, 65-72 (1988)], these values correspond to solvent volume fractions of 59% and 39%, respectively. The corresponding V m values for one and four molecules per crystallographic asymmetric unit are 6.14 and 1.53, respectively, which are far outside the limits normally observed for proteins. Therefore, it appears that the protein crystallizes with either two or three molecules in the asymmetric unit. A self-rotation function that was calculated using the native data collected on the area detector did not show a noncrystallographic 2-fold or 3-fold axis.

Claims: Claims for the following Contracting States : AT, BE, CH, DE, DK, ES, FR, GB, IT, LI, LU, NL, SE Crystalline, human recombinant GM-CSF (granulocyte - macrophage colony - stimulating factor) lacking an N-terminal methionine and having a methionine at position 80. The crystalline GM-CSF of claim 1 which has the amino acid sequence: A pharmaceutical composition comprising crystalline, human recombinant GM-CSF as claimed in claim 1 or Claim 2 and pharmaceutically acceptable carrier. Claims for the following Contracting State : GR Use of crystalline, human recombinant GM-CSF (granulocyte - macrophage colony - stimulating factor) lacking an N-terminal methionine and having a methionine at position 80 in the manufacture of a medicament. Use according to Claim 1 of crystalline GM-CSF having the following amino acid sequence:-

Inventors: HAMMOND GERALD S, LE HUNG V, NAGABHUSHAN TATTANAHALI L, REICHERT PAUL, TROTTA PAUL P, HAMMOND, GERALD S., LE, HUNG V., NAGABHUSHAN, TATTANAHALI L., REICHERT, PAUL, TROTTA, PAUL P.
Applicants: SCHERING CORP, SCHERING CORPORATION
Application year: 1990
Main classification: C12P21
IPC codes: C07K14, C12R1, C12N15, C12P21, A61K38