SNRNP-A ANTIGEN AND FRAGMENTS THEREOF

Abstract: The present invention relates to a protein antigen which is reactive towards an auto-antibody which is associated with an auto-immune disease, and the use of this protein in diagnostic tests relating to auto-immune diseases.

Description: The invention relates to a protein antigen which is reactive towards an auto-antibody which is associated with an auto-immune disease, and the use of this protein in diagnostic tests relating to auto-immune diseases. In healthy humans and animals, after the intrusion of a foreign substance (the antigen) the body will attempt to attack this antigen by generating specific antibodies which are directed against this antigen. Most individuals are in general tolerant to substances which occur in their own body. Some individuals on the other hand generate antibodies against endogenous substances, tissues, or components. Such antibodies (auto-antibodies) cause great damage to the organs which contain these endogenous substances. The development of the associated auto-immune disease is in general very slow (a matter of years) and this hampers timely clinical diagnosis and treatment to a high degree. Diagnosis can generally only be made after appreciable damage has already been caused to the body. Earlier research has shown that many of these auto-antibodies are syndrome-specific, i.e. the disease seems to be characterized by the occurrence of specific auto-antibodies. Furthermore, it appears from recent research that these specific auto-antibodies can often be detected in the serum of a patient long before the clinical diagnosis can be made with certainty. The auto-antibodies therefore predict, as it were, which disease is developing. The timely detection of these auto-antibodies in the patient's serum is the more important because the patient's treatment can then be initiated earlier, thereby delaying, or even preventing, the often serious damage during the later phase of the disease. Patients with an auto-immune disease possess auto-antibodies directed against one or more protein antigens, such as small protein molecules which occur in the cell nucleus and which are complexed with ribonucleic acid, such as the so-called snRNPS (small nuclear ribonucleo-proteins). A snRNP protein and fragments thereof having a well defined amino acid sequence have now been found, which render it possible to diagnose immune diseases, especially systemic lupus erythematosus (SLE) and mixed connective tissue disease (MCTD), at an early stage. The invention therefore relates to a protein with the structure as shown in formula 1 which protein is substantially free from other natural material, and to fragments thereof which are immunochemically reactive, and to peptides which contain such fragments. The invention furthermore relates to preparative methods for such a protein, fragment or peptide, to diagnostic methods for the detection of auto-immune antibodies with the aid of such a protein, fragment, or peptide and to test kits for carrying out such diagnostic methods, and to pharmaceutical compositions for combating auto-immune diseases, especially SLE and MCTD, which compositions contain such a protein, fragment or peptide. The invention furthermore relates to DNA which codes for the protein, the fragments and the peptides according to the invention, to a vector which contains the DNA, and to a host which contains such a vector. The protein according to the invention is known in the literature as the U₁-snRNP-A protein. This protein, however, has been insufficiently purified in the literature. Structure elucidation has been impossible hitherto. By using a DNA clone which contains the nucleotide sequence coding for human U₁-snRNP-A protein, and which clone was obtained using recombinant DNA techniques known per se, it was possible to elucidate, by techniques known per se, the amino acid sequence of the U₁-snRNP-A protein, as is shown in formula 1. Some fragments of the protein according to the invention react specifically with auto-antibodies against the U₁-snRNP-A protein. Surprisingly, it has now also been found that other fragments of the protein react with auto-antibodies against the U₂-snRNP-B″ protein and the Sm protein, two other snRNP proteins. The presence of antibodies against the Sm protein form an indication that the patient is developing SLE, whilst the occurrence of antibodies against the U₁-snRNP-A and U₂-snRNP-B″ proteins provides an indication of MCTD. The fragments of the protein of formula 1 which react with antibodies against U₁-snRNP-A, U₂-snRNP-B″ and Sm protein have the aminoacid sequences shown in formulae 2, 3, and 4 respectively. The invention also relates to smaller fragments of these amino acid sequences mentioned provided these smaller fragments are still immunochemically reactive, such as the amino acid sequence of formula 2a (being a smaller fragment of the peptide of formula 2) and the amino acid sequence of formula 3a (being a smaller fragment of the peptide of formula 3). The invention further relates to peptides which contain such fragments. The preparation of these immunochemically reactive protein fragments according to the invention follows known routes, such as chemical synthesis or recombinant DNA techniques. The protein, the fragments and the peptide according to the invention can be used for the detection of the auto-antibodies mentioned using diagnostic methods known per se for the determination of antibodies by means of antigens reactive with them. Both homogeneous and heterogeneous diagnostic tests are suitable for this purpose. Use can thus be made of sandwich type tests or of an agglutination test in which, if desired, an inhibition or competition reaction is used. Suitable tests are those in which a solid phase is used, such as the inner wall of a microassay well, a tube or capillary, a membrane, filter, test strip or the surface of a particle to which an antibody or antigen is bound. For the detection, use is thus made of an antigen or antibody which is provided with a label, such as a radio-active isotope, a dyestuff, metal sol such as a gold sol, an enzyme, or another known label. Methods for the preparation of labelled antigens or antibodies are generally known. Moreover, the protein, fragments thereof, and peptides which contain such fragments, can be used in suitable pharmaceutical dosage forms against auto-immune diseases. For example, purified U₁snRNP-A antigen can be injected intravenously into a patient who is producing antibodies against this antigen. One should administer to a human preferably 1-1000 nanomoles of said A-antigen. Administration of such a preparation via the circulatory system of a patient with an auto-immune disease results in an antigen-antibody complex formation which can decrease further attack on the abovementioned tissues. The diagnostic methods mentioned can be used to determine the precise quantity of auto-antibodies circulating in the blood. The quantity of the preparation to be administered is determined by the result of said test. The invention is illustrated by reference to the following Examples. Example I Nucleotide sequence and inferred amino acid sequence of the A protein Starting from the material lodged with the Central Office for Mould Cultures in Baarn, The Netherlands under number CBS 617.87, the nucleotide sequence of the cDNA inserts has been determined using the so-called dideoxy method described by Sanger et al. (PNAS, 74 , 5463-5467, 1977). This nucleotide sequence is shown in formula 5. The initiation codon ATG is located at nucleotide position 126. The stop codon TAG is located at nucleotide position 972, followed by a non-coding region of 223 nucleotides. The inferred amino acid sequence of 282 amino acids for the A protein (formula 1) gives a molecular weight of 31.2 kd, which is in good agreement with the observed molecular weight of 32 kd for the A protein analyzed using a SDS-polyacrylamide gel. Example II Mapping of an antigenic determinant of the A protein The amino acid sequence of the A protein inferred from the nucleotide sequence as given, has an interesting distribution of charged and aromatic amino acids. These can be assigned to two regions, separated by a segment with a very high proline content (amino acid 140 to 206 in figure 1). Most of the charged and aromatic amino acids are located on the N-terminal part of the protein. The amino acid sequence of the A protein, according to Formula 1, can be split into two parts, namely amino acid 1 to 171 and amino acid 172 to 282. The DNA sequences coding for these sequences, are each placed separately in a suitable expression vector with recombinant DNA techniques know per se. The proteins synthesized by this expression vector are then brought into contact with patient serum containing auto-antibodies via an immunoblotting experiment. Patient serum containing anti-Sm-antibodies reacts specifically with the N-terminal part (amino acid 1 to 171) of the A protein. In this N-terminal part there is a cluster of eleven charged amino acids which represent a hydrophilic section of the A protein (amino acid 103 to 112 in formula 1 ). Hydrophilicity analysis using the Hopp and Woods method supports this site determination. This sequence Glu - Arg - Asp - Arg - Lys - Arg - Glu - Lys - Arg - Lys in the A protein thus forms an epitope which is recognized by patient serum which contains anti-Sm antibodies. Moreover, another unexpected aspect relating to the amino acid sequence of the A protein emerges from this immunoblotting experiment. Both patient serum containing anti-B″-antibodies and patient serum containing anti-A-antibodies react in an immunoblotting experiment with the C-terminal part of the A protein (amino acid 172 to 282 in formula 1) . If the inferred amino acid sequence of the A protein is laid in a line with the known amino acid sequence of B″ protein, on the grounds of this overlap it can then be determined by exclusion that the specific epitope responsible for the antigen character with respect to anti-A-antibodies is located in the A protein in the region of amino acid 172 to 207 according to formula 1 ; this sequence represents a strongly hydrophilic area, and hydrophilicity analysis using the Hopp and Woods method supports this epitope mapping. This also establishes that the epitope which cross-reacts with anti-B″-antibody is located in the region of amino acid 207 to 282 in formula 1 . Example III Enzyme Immuno Assay (EIA) An EIA was set up in which was tested 480 sera from patients with connective tissue diseases. Simultaneously, the same serum samples were tested on immunoblots with eukaryotic nuclear proteins as antigen. The intensity of the reaction on these blots was scored on an arbitrary scale ranging from "very weak" to "strong". When sera were thus grouped on basis of increasing titer of antibodies against eukaryotic A or B″ proteins, the signals obtained in the EIA appeared to correlate perfectly with the blotting results; for the two antigens tested, an increased blotting signal corresponded with an increased EIA reading. When patients were subsequently grouped on basis of their diagnosis, it appeared that this simple and sensitive EIA allowed to distinguish between patients with definite SLE and patients with MCTD. Especially the presence of antibodies against the A protein appeared to be diagnostic for MCTD, since they do not, or in very low titers, occur in definite SLE patients.

Claims: A protein with the structure as shown in formula 1, which protein is substantially free from other natural material, and fragments thereof which are immunochemically reactive and peptides which contain such fragments. Amino acid sequences according to claim 1 of the formula 2 and immunochemically reactive fragments thereof and peptides which contain such sequences or fragments thereof. Amino acid sequences according to claim 1 of the formula 3 and immunochemically reactive fragments thereof and peptides which contain such sequences or fragments thereof. Amino acid sequences according to claim 1 of the formula 4 and immunochemically reactive fragments thereof and peptides which contain such sequences or fragments thereof. Amino acid sequence according to claim 1 or 2 of the formula 2a. Amino acid sequence according to claim 1 or 3 of the formula 3a. DNA coding for the fragments, the peptides, and the protein according to claim 1. Vector which contains DNA according to claim 7. Host which contains the vector according to Claim 8. Method for the preparation of the protein according to Claim 1, and of fragments thereof which are immunochemically reactive and of peptides which contain such fragments, characterized in that the protein, the fragments, and the peptides are prepared according to a method known per se using peptide synthesis techniques and/or recombinant DNA techniques. Method for the determination of an auto-antibody in a sample, characterized in that, use is made of the protein according to Claim 1 or a fragment thereof which is immunochemically reactive or a peptide which contains such a fragment in which at least one part of the protein, fragment, or peptide is provided with a label. Test kit for the determination of an auto-antibody with the characteristic that the test kit, along with the usual reagents for these determinations, also contains a protein according to Claim 1 or a fragment thereof which is immunochemically reactive or a peptide which contains such a fragment in which at least one part of the protein fragment or peptide is provided with a label. Pharmaceutical preparation containing, along with the usual additions, the protein according to Claim 1 as active component, or a fragment thereof which is immunochemically reactive, or a peptide which contains such a fragment.

Inventors: HABETS, WINAND JOHANNES ANTONIUS, SILLEKENS, PETER THEODORUS G., VAN VENROOIJ, WALTER JACOBUS
Applicants: AKZO N.V.
Application year: 1988
Main classification: C07K13
IPC codes: C07K7, C12P21, C07K14, G01N33, C12N15, A61K38, A61K39