Time series anomaly detection plays a critical role in automated monitoring systems. Most previous deep learning efforts related to time series anomaly detection were based on recurrent neural networks (RNN). In this paper, we propose a time series segmentation approach based on convolutional neural networks (CNN) for anomaly detection. Moreover, we propose a transfer learning framework that pretrains a model on a large-scale synthetic univariate time series data set and then fine-tunes its weights on small-scale, univariate or multivariate data sets with previously unseen classes of anomalies. For the multivariate case, we introduce a novel network architecture. The approach was tested on multiple synthetic and real data sets successfully.
Our approach was influenced by recent successes of deep learning for image segmentation. @cite_21 proposed a fully convolutional network (FCN), where common convolutional architectures for image classification (e.g. AlexNet, the VGG net, and GoogLeNet) are used as encoders, and counterpart deconvolution layers are used for upsampling as decoders. U-Net @cite_27 improved upon the FCN architecture by introducing so-called skip channels between encoding layers and decoding layers into the architecture, so that high-level features and low-level features are concatenated to prevent information loss along deep sequential layers. This architecture was proven successful when applied to segmentation of neuronal structures in electron microscopic images in the original paper. It was subsequently applied to several other biomedical image segmentation tasks (e.g. @cite_5 @cite_29 @cite_8 ) as well as image segmentation problems in earth science (e.g. @cite_16 ), remote sensing (e.g. @cite_28 ), and automated driving (e.g. @cite_3 ).
@cite_8 @cite_28 @cite_29 @cite_21 @cite_3 @cite_27 @cite_5 @cite_16
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U-Net has been providing state-of-the-art performance in many medical image segmentation problems. Many modifications have been proposed for U-Net, such as attention U-Net, recurrent residual convolutional U-Net (R2-UNet), and U-Net with residual blocks or blocks with dense connections. However, all these modifications have an encoder-decoder structure with skip connections, and the number of paths for information flow is limited. We propose LadderNet in this paper, which can be viewed as a chain of multiple U-Nets. Instead of only one pair of encoder branch and decoder branch in U-Net, a LadderNet has multiple pairs of encoder-decoder branches, and has skip connections between every pair of adjacent decoder and decoder branches in each level. Inspired by the success of ResNet and R2-UNet, we use modified residual blocks where two convolutional layers in one block share the same weights. A LadderNet has more paths for information flow because of skip connections and residual blocks, and can be viewed as an ensemble of Fully Convolutional Networks (FCN). The equivalence to an ensemble of FCNs improves segmentation accuracy, while the shared weights within each residual block reduce parameter number. Semantic segmentation is essential for retinal disease detection. We tested LadderNet on two benchmark datasets for blood vessel segmentation in retinal images, and achieved superior performance over methods in the literature. The implementation is provided https: github.com juntang-zhuang LadderNet Convolutional neural networks (CNNs) have revolutionized medical image analysis over the past few years. The U-Net architecture is one of the most well-known CNN architectures for semantic segmentation and has achieved remarkable successes in many different medical image segmentation applications. The U-Net architecture consists of standard convolution layers, pooling layers, and upsampling layers. These convolution layers learn representative features of input images and construct segmentations based on the features. However, the features learned by standard convolution layers are not distinctive when the differences among different categories are subtle in terms of intensity, location, shape, and size. In this paper, we propose a novel CNN architecture, called Dense-Res-Inception Net (DRINet), which addresses this challenging problem. The proposed DRINet consists of three blocks, namely a convolutional block with dense connections, a deconvolutional block with residual inception modules, and an unpooling block. Our proposed architecture outperforms the U-Net in three different challenging applications, namely multi-class segmentation of cerebrospinal fluid on brain CT images, multi-organ segmentation on abdominal CT images, and multi-class brain tumor segmentation on MR images. Object segmentation requires both object-level information and low-level pixel data. This presents a challenge for feedforward networks: lower layers in convolutional nets capture rich spatial information, while upper layers encode object-level knowledge but are invariant to factors such as pose and appearance. In this work we propose to augment feedforward nets for object segmentation with a novel top-down refinement approach. The resulting bottom-up top-down architecture is capable of efficiently generating high-fidelity object masks. Similarly to skip connections, our approach leverages features at all layers of the net. Unlike skip connections, our approach does not attempt to output independent predictions at each layer. Instead, we first output a coarse ‘mask encoding’ in a feedforward pass, then refine this mask encoding in a top-down pass utilizing features at successively lower layers. The approach is simple, fast, and effective. Building on the recent DeepMask network for generating object proposals, we show accuracy improvements of 10–20 in average recall for various setups. Additionally, by optimizing the overall network architecture, our approach, which we call SharpMask, is 50 faster than the original DeepMask network (under .8 s per image). Object segmentation requires both object-level information and low-level pixel data. This presents a challenge for feedforward networks: lower layers in convolutional nets capture rich spatial information, while upper layers encode object-level knowledge but are invariant to factors such as pose and appearance. In this work we propose to augment feedforward nets for object segmentation with a novel top-down refinement approach. The resulting bottom-up top-down architecture is capable of efficiently generating high-fidelity object masks. Similarly to skip connections, our approach leverages features at all layers of the net. Unlike skip connections, our approach does not attempt to output independent predictions at each layer. Instead, we first output a coarse mask encoding' in a feedforward pass, then refine this mask encoding in a top-down pass utilizing features at successively lower layers. The approach is simple, fast, and effective. Building on the recent DeepMask network for generating object proposals, we show accuracy improvements of 10-20 in average recall for various setups. Additionally, by optimizing the overall network architecture, our approach, which we call SharpMask, is 50 faster than the original DeepMask network (under .8s per image).