Figure S7 Decay of EHH as a function of distance in Holstein on BTA29. The chromosomal region of 31.807– 32.078 Mb was considered as a candidate region, which was deﬁned using markers BTA-65574 and BTA-65564. The sequence and population frequency of each core haplotype are shown after the colons, where A, C, G and T are coded respectively as 1, 2, 3 and 4. Figure S8 Decay of EHH as a function of distance in Holstein on BTA29. The chromosomal region of 33.693– 34.136 Mb was considered as a candidate region, which was deﬁned using markers BTA-65681 and BTA-73109. The sequence and population frequency of each core hap- lotype are shown after the colons, where A, C, G and T are coded respectively as 1, 2, 3 and 4. Figure S9 Decay of EHH as a function of distance in Angus on BTA29. The chromosomal region of 7.767–8.006 Mb was considered as a candidate region, which was deﬁned using markers BTA-06107 and BTA-27538. The sequence and population frequency of each core haplotype are shown after the colons, where A, C, G and T are coded respectively as 1, 2, 3 and 4. Figure S10 Pattern of LD estimated using 370 SNP markers on BTA19 in Angus. The horizontal and vertical axes are LD and signatures of selection 605 scaled according to the physical distance between markers. Red represents complete LD and blue represents zero LD for each marker pair. Figure S11 Pattern of LD estimated using 367 SNP markers on BTA19 in Holstein. The horizontal and vertical axes are scaled according to the physical distance between markers. Red represents complete LD and blue represents zero LD for each marker pair. Figure S12 Pattern of LD estimated using 187 SNP markers on BTA29 in Angus. The horizontal and vertical axes are scaled according to the physical distance between markers. Red represents complete LD and blue represents zero LD for each marker pair. Figure S13 Pattern of LD estimated using 179 SNP markers on BTA29 in Holstein. The horizontal and vertical axes are scaled according to the physical distance between markers. Red represents complete LD and blue represents zero LD for each marker pair. Please note: Blackwell Publishing is not responsible for the content or functionality of any supporting information supplied by the authors. 2008 The Authors, Journal compilation 2008 International Society for Animal Genetics, Animal Genetics, 39, 597–605